BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780261|ref|YP_003064674.1| 50S ribosomal protein L3
[Candidatus Liberibacter asiaticus str. psy62]
         (221 letters)

Database: nr 
           13,984,884 sequences; 4,792,584,752 total letters

Searching..................................................done


Results from round 1


>gi|254780261|ref|YP_003064674.1| 50S ribosomal protein L3 [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254039938|gb|ACT56734.1| 50S ribosomal protein L3 [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 221

 Score =  447 bits (1150), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 221/221 (100%), Positives = 221/221 (100%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN
Sbjct: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF
Sbjct: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV
Sbjct: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
           SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS
Sbjct: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221


>gi|315122818|ref|YP_004063307.1| 50S ribosomal protein L3 [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313496220|gb|ADR52819.1| 50S ribosomal protein L3 [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 221

 Score =  395 bits (1015), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 188/221 (85%), Positives = 206/221 (93%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR GVVARKLGMTCVYN+EG+R+PVTVLHLDNCQVV HRTL KNGYMAVQVGAG+AK+KN
Sbjct: 1   MRPGVVARKLGMTCVYNLEGKRLPVTVLHLDNCQVVAHRTLQKNGYMAVQVGAGDAKIKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKPMRGFFSSVN SPKK+L EFRVQK+D+LL +GSV SPS+F VGQLVDVTG+TIGKGF
Sbjct: 61  VSKPMRGFFSSVNASPKKRLSEFRVQKEDELLQIGSVLSPSHFNVGQLVDVTGVTIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNF GLRA+HGVSISHRS GSTGCRQDPGRVFKNKKMAG MGGNR+TVKNLEV+
Sbjct: 121 AGAMKRHNFAGLRASHGVSISHRSAGSTGCRQDPGRVFKNKKMAGHMGGNRITVKNLEVI 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
           S+DDKRGLI VKGCVPGAK +SWILVRDSFKSA N KGKV+
Sbjct: 181 SIDDKRGLIFVKGCVPGAKNDSWILVRDSFKSAANYKGKVA 221


>gi|86357305|ref|YP_469197.1| 50S ribosomal protein L3 [Rhizobium etli CFN 42]
 gi|109893545|sp|Q2K9L6|RL3_RHIEC RecName: Full=50S ribosomal protein L3
 gi|86281407|gb|ABC90470.1| 50S ribosomal protein L3 [Rhizobium etli CFN 42]
          Length = 213

 Score =  303 bits (777), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 147/213 (69%), Positives = 172/213 (80%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  +PVTVL +D CQVV  RT++KNGY AVQ+GAG+AKVKN
Sbjct: 1   MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMDGCQVVATRTVEKNGYTAVQLGAGQAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+  NV PK KL EFRV  +D+LL +G+     +F  GQLVDVTG TIGKGF
Sbjct: 61  TSKAMRGNFAVANVEPKAKLAEFRVS-EDNLLEIGTELKADHFAAGQLVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           S D+ RGLIL+KG VPG+ K +WI+VRD+ KSA
Sbjct: 180 STDEDRGLILIKGAVPGS-KGAWIIVRDAVKSA 211


>gi|222148366|ref|YP_002549323.1| 50S ribosomal protein L3 [Agrobacterium vitis S4]
 gi|254803647|sp|B9JVN7|RL3_AGRVS RecName: Full=50S ribosomal protein L3
 gi|221735354|gb|ACM36317.1| 50S ribosomal protein L3 [Agrobacterium vitis S4]
          Length = 213

 Score =  303 bits (777), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 148/214 (69%), Positives = 173/214 (80%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  +PVTVL LDNCQV+  RT+DK+GY AVQ+GAG+AKVKN
Sbjct: 1   MRSGVIAQKVGMTRVYNDAGEHVPVTVLRLDNCQVLAQRTVDKHGYTAVQLGAGQAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F++ NV PK KL EFRV  +D+L+ VGS     +F  GQLVDVTG TIGKGF
Sbjct: 61  TSKAMRGNFAAANVEPKAKLVEFRVS-EDNLMDVGSELKAGHFEAGQLVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRATHGVS+SHRSHGSTG  QDPG+V+K K+MAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRHNFGGLRATHGVSVSHRSHGSTGSNQDPGKVWKGKRMAGHMGQTRVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           S D+ RGLILVKG VPG+ K SWI+VRD+ KSA 
Sbjct: 180 STDEDRGLILVKGAVPGS-KGSWIIVRDAVKSAA 212


>gi|222085675|ref|YP_002544205.1| 50S ribosomal protein L3 [Agrobacterium radiobacter K84]
 gi|221723123|gb|ACM26279.1| 50S ribosomal protein L3 [Agrobacterium radiobacter K84]
          Length = 219

 Score =  303 bits (777), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 147/213 (69%), Positives = 174/213 (81%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  +PVTVL ++ CQVV  RT++KNGY AVQ+GAG+AKVKN
Sbjct: 7   MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMEGCQVVAQRTVEKNGYTAVQLGAGQAKVKN 66

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK +RG F+  +V PK KL EFRV  DD+LL VG+    ++F+ GQLVDVTG TIGKGF
Sbjct: 67  TSKALRGHFAVASVEPKAKLVEFRVS-DDNLLEVGTEIKAAHFSAGQLVDVTGTTIGKGF 125

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG  RVT +NLEVV
Sbjct: 126 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 185

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           S D+ RGLILVKG VPG+ K +WI+VRD+ KSA
Sbjct: 186 STDEDRGLILVKGAVPGS-KGAWIIVRDAVKSA 217


>gi|190891355|ref|YP_001977897.1| 50S ribosomal protein L3 [Rhizobium etli CIAT 652]
 gi|226730554|sp|B3PWS1|RL3_RHIE6 RecName: Full=50S ribosomal protein L3
 gi|190696634|gb|ACE90719.1| 50S ribosomal protein L3 [Rhizobium etli CIAT 652]
 gi|327191386|gb|EGE58412.1| 50S ribosomal protein L3 [Rhizobium etli CNPAF512]
          Length = 213

 Score =  303 bits (776), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 147/213 (69%), Positives = 172/213 (80%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  +PVTVL +D CQVV  RT++KNGY AVQ+GAG+AKVKN
Sbjct: 1   MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMDGCQVVATRTVEKNGYTAVQLGAGQAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+  NV PK KL EFRV  +D+LL +G+     +F  GQLVDVTG TIGKGF
Sbjct: 61  TSKAMRGNFAVANVEPKAKLAEFRVS-EDNLLEIGTELKAGHFAAGQLVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           S D+ RGLIL+KG VPG+ K +WI+VRD+ KSA
Sbjct: 180 STDEDRGLILIKGAVPGS-KGAWIIVRDAVKSA 211


>gi|116251540|ref|YP_767378.1| 50S ribosomal protein L3 [Rhizobium leguminosarum bv. viciae 3841]
 gi|123261675|sp|Q1MIE1|RL3_RHIL3 RecName: Full=50S ribosomal protein L3
 gi|115256188|emb|CAK07269.1| putative 50S ribosomal protein L3 [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 213

 Score =  301 bits (772), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 147/213 (69%), Positives = 171/213 (80%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  +PVTVL ++ CQVV  RT++KNGY AVQ+GAG+AKVKN
Sbjct: 1   MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMEGCQVVATRTVEKNGYTAVQLGAGQAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+  NV PK KL EFRV  +D LL VG+     +F  GQLVDVTG TIGKGF
Sbjct: 61  TSKAMRGNFAIANVEPKAKLTEFRVS-EDQLLEVGTEIKAGHFAAGQLVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           S D+ RGLIL+KG VPG+ K +WI+VRD+ KSA
Sbjct: 180 STDEDRGLILIKGAVPGS-KGAWIIVRDAVKSA 211


>gi|209548935|ref|YP_002280852.1| 50S ribosomal protein L3 [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|226730555|sp|B5ZYT5|RL3_RHILW RecName: Full=50S ribosomal protein L3
 gi|209534691|gb|ACI54626.1| ribosomal protein L3 [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 213

 Score =  301 bits (771), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 146/213 (68%), Positives = 171/213 (80%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  +PVTVL +D CQVV  RT++KNGY AVQ+GAG+AKVKN
Sbjct: 1   MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMDGCQVVATRTVEKNGYTAVQLGAGQAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+  NV PK K+ EFRV  +D LL +G+     +F  GQLVDVTG TIGKGF
Sbjct: 61  TSKAMRGNFAVANVEPKAKVAEFRVS-EDQLLEIGTEIKAGHFAAGQLVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           S D+ RGLIL+KG VPG+ K +WI+VRD+ KSA
Sbjct: 180 STDEDRGLILIKGAVPGS-KGAWIIVRDAVKSA 211


>gi|241204165|ref|YP_002975261.1| 50S ribosomal protein L3 [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858055|gb|ACS55722.1| ribosomal protein L3 [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 213

 Score =  297 bits (761), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 144/213 (67%), Positives = 171/213 (80%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  +PVTVL ++  QVV  RT++KNGY AVQ+GAG+AKVKN
Sbjct: 1   MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMEAVQVVATRTVEKNGYTAVQLGAGQAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+  NV PK K+ EFRV  +D+LL +G+     +F  GQLVDVTG TIGKGF
Sbjct: 61  TSKAMRGNFAIANVEPKAKVTEFRVS-EDNLLEIGTEIKAGHFAAGQLVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           S D+ RGLIL+KG VPG+ K +WI+VRD+ KSA
Sbjct: 180 STDEDRGLILIKGAVPGS-KGAWIIVRDAVKSA 211


>gi|15965109|ref|NP_385462.1| 50S ribosomal protein L3 [Sinorhizobium meliloti 1021]
 gi|307314359|ref|ZP_07593965.1| 50S ribosomal protein L3 [Sinorhizobium meliloti BL225C]
 gi|307322071|ref|ZP_07601447.1| 50S ribosomal protein L3 [Sinorhizobium meliloti AK83]
 gi|42559675|sp|Q92QH0|RL3_RHIME RecName: Full=50S ribosomal protein L3
 gi|15074289|emb|CAC45935.1| Probable 50S ribosomal protein L3 [Sinorhizobium meliloti 1021]
 gi|306892253|gb|EFN23063.1| 50S ribosomal protein L3 [Sinorhizobium meliloti AK83]
 gi|306899057|gb|EFN29699.1| 50S ribosomal protein L3 [Sinorhizobium meliloti BL225C]
          Length = 228

 Score =  295 bits (755), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 144/212 (67%), Positives = 170/212 (80%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  IPVTVL L+NCQVV HRT +KNGY AVQ+GAG +KVKN
Sbjct: 1   MRSGVIAQKVGMTRVYNDAGEHIPVTVLRLENCQVVSHRTEEKNGYTAVQLGAGRSKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
             K MRG F++ +V PK KL EFRV  D+ L+ +G+  +  +F  GQLVDVTG TIGKGF
Sbjct: 61  TPKAMRGHFAAASVEPKAKLVEFRVSADN-LIDIGAELTAGHFVAGQLVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GA+KRHNFGGLRATHGVS+SHRSHGSTG  QDPGRV+K K+MAG MG  RVT +NLEVV
Sbjct: 120 AGAIKRHNFGGLRATHGVSVSHRSHGSTGSNQDPGRVWKGKRMAGHMGQTRVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           S D+ RGLILVKG VPG+ K SWI+VRD+ KS
Sbjct: 180 STDEDRGLILVKGAVPGS-KGSWIVVRDAIKS 210


>gi|150396207|ref|YP_001326674.1| 50S ribosomal protein L3 [Sinorhizobium medicae WSM419]
 gi|166234597|sp|A6U859|RL3_SINMW RecName: Full=50S ribosomal protein L3
 gi|150027722|gb|ABR59839.1| ribosomal protein L3 [Sinorhizobium medicae WSM419]
          Length = 228

 Score =  294 bits (753), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 144/212 (67%), Positives = 169/212 (79%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  IPVTVL L+NCQVV  RT +KNGY AVQ+GAG +KVKN
Sbjct: 1   MRSGVIAQKVGMTRVYNDAGEHIPVTVLRLENCQVVAQRTEEKNGYTAVQLGAGRSKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
             K MRG F++ +V PK KL EFRV  D+ L+ +GS  +  +F  GQLVDVTG TIGKGF
Sbjct: 61  TPKAMRGHFAAASVEPKAKLVEFRVSADN-LIDIGSELTAGHFVAGQLVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GA+KRHNFGGLRATHGVS+SHRSHGSTG  QDPGRV+K K+MAG MG  RVT +NLEVV
Sbjct: 120 AGAIKRHNFGGLRATHGVSVSHRSHGSTGSNQDPGRVWKGKRMAGHMGQTRVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           S D+ RGLILVKG VPG+ K SWI+VRD+ KS
Sbjct: 180 STDEDRGLILVKGAVPGS-KGSWIVVRDAIKS 210


>gi|227821756|ref|YP_002825726.1| 50S ribosomal protein L3 [Sinorhizobium fredii NGR234]
 gi|227340755|gb|ACP24973.1| 50S ribosomal protein L3 [Sinorhizobium fredii NGR234]
          Length = 257

 Score =  291 bits (745), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 141/212 (66%), Positives = 171/212 (80%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  IPVTVL L+NCQVV  RT +KNGY AVQ+GAG +KVKN
Sbjct: 30  MRSGVIAQKVGMTRVYNDAGEHIPVTVLRLENCQVVAQRTEEKNGYTAVQLGAGRSKVKN 89

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +K +RG F++ +V PK K+ EFRV  D+ L+ +G+  + S+F  GQLVDVTG TIGKGF
Sbjct: 90  TTKALRGHFAAASVEPKAKVVEFRVTADN-LIDIGAELTASHFVAGQLVDVTGTTIGKGF 148

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GA+KRHNFGGLRATHGVS+SHRSHGSTG  QDPGRV+K K+MAG MG  RVT +NLEVV
Sbjct: 149 AGAIKRHNFGGLRATHGVSVSHRSHGSTGSNQDPGRVWKGKRMAGHMGQTRVTTQNLEVV 208

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           S D+ RGLILVKG VPG+ K +WI+VRD+ KS
Sbjct: 209 STDEDRGLILVKGAVPGS-KGAWIVVRDAIKS 239


>gi|15889242|ref|NP_354923.1| 50S ribosomal protein L3 [Agrobacterium tumefaciens str. C58]
 gi|42559664|sp|Q8UE18|RL3_AGRT5 RecName: Full=50S ribosomal protein L3
 gi|15157069|gb|AAK87708.1| 50S ribosomal protein L3 [Agrobacterium tumefaciens str. C58]
          Length = 213

 Score =  290 bits (741), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 141/214 (65%), Positives = 170/214 (79%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  IPVTVL LDN QVV  RT DKNGY AVQ+GAG++KVKN
Sbjct: 1   MRSGVIAQKVGMTRVYNDAGEHIPVTVLRLDNVQVVAQRTEDKNGYTAVQLGAGQSKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +K +RG F++ NV PK KL EFRV  ++ L+ +G+  + ++F  GQLVDVTG TIGKGF
Sbjct: 61  TTKALRGHFAAANVEPKAKLVEFRVSPEN-LIDIGATLTANHFQSGQLVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGG RA+HG S+SHR+HGSTG  QDPGRV+K K+MAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRHNFGGGRASHGNSVSHRAHGSTGNNQDPGRVWKGKRMAGHMGQTRVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           S D+ RGLILVKG VPG+ K SWI+VRD+ KSA 
Sbjct: 180 STDEDRGLILVKGAVPGS-KGSWIIVRDAVKSAA 212


>gi|90417763|ref|ZP_01225675.1| ribosomal protein L3 [Aurantimonas manganoxydans SI85-9A1]
 gi|90337435|gb|EAS51086.1| ribosomal protein L3 [Aurantimonas manganoxydans SI85-9A1]
          Length = 241

 Score =  289 bits (740), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 140/214 (65%), Positives = 173/214 (80%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  +PVTVL ++N QVV  RT +KNGY AVQVGAG AKVKN
Sbjct: 1   MRSGVIAQKVGMTRVYNDVGEHVPVTVLKVENLQVVAQRTKEKNGYTAVQVGAGLAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SKPMRG F+  +V PK+KL EFRV  DD+++ VG+  +  +F  GQ+VDVTG +IGKGF
Sbjct: 61  TSKPMRGVFAQASVEPKRKLVEFRVS-DDNMIDVGAEITAEHFVPGQMVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG  RVT +NL+VV
Sbjct: 120 AGAMKRHNFGGLRATHGVSVSHRSHGSTGQRQDPGKVFKNKKMAGHMGDVRVTTQNLQVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            +D ++GLILV+G VPG+ K  WI +RD+ K+++
Sbjct: 180 RIDPEKGLILVRGAVPGS-KGGWIEIRDAVKASL 212


>gi|325293336|ref|YP_004279200.1| 50S ribosomal protein L3 [Agrobacterium sp. H13-3]
 gi|325061189|gb|ADY64880.1| 50S ribosomal protein L3 [Agrobacterium sp. H13-3]
          Length = 213

 Score =  288 bits (737), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 139/214 (64%), Positives = 170/214 (79%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  IPVTVL +DN QVV  RT DKNGY AVQ+GAG++KVKN
Sbjct: 1   MRSGVIAQKVGMTRVYNDAGEHIPVTVLRMDNVQVVSQRTEDKNGYTAVQLGAGQSKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +K +RG F++ NV PK KL EFRV  ++ L+ +G+  + ++F  GQLVDVTG TIGKGF
Sbjct: 61  TTKALRGHFAAANVEPKAKLVEFRVSPEN-LIDIGATLTATHFQAGQLVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGG RA+HG S+SHR+HGSTG  QDPGRV+K K+MAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRHNFGGGRASHGNSVSHRAHGSTGNNQDPGRVWKGKRMAGHMGQTRVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           S D+ RGLILVKG VPG+ K +WI+VRD+ KSA 
Sbjct: 180 STDEDRGLILVKGAVPGS-KGAWIIVRDAVKSAA 212


>gi|62290144|ref|YP_221937.1| 50S ribosomal protein L3 [Brucella abortus bv. 1 str. 9-941]
 gi|82700067|ref|YP_414641.1| 50S ribosomal protein L3 [Brucella melitensis biovar Abortus 2308]
 gi|161511150|ref|NP_539674.2| 50S ribosomal protein L3 [Brucella melitensis bv. 1 str. 16M]
 gi|189024382|ref|YP_001935150.1| Ribosomal protein L3 [Brucella abortus S19]
 gi|225852730|ref|YP_002732963.1| 50S ribosomal protein L3 [Brucella melitensis ATCC 23457]
 gi|254689453|ref|ZP_05152707.1| 50S ribosomal protein L3 [Brucella abortus bv. 6 str. 870]
 gi|254693938|ref|ZP_05155766.1| 50S ribosomal protein L3 [Brucella abortus bv. 3 str. Tulya]
 gi|254697588|ref|ZP_05159416.1| 50S ribosomal protein L3 [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730482|ref|ZP_05189060.1| 50S ribosomal protein L3 [Brucella abortus bv. 4 str. 292]
 gi|256044883|ref|ZP_05447787.1| 50S ribosomal protein L3 [Brucella melitensis bv. 1 str. Rev.1]
 gi|256113787|ref|ZP_05454591.1| 50S ribosomal protein L3 [Brucella melitensis bv. 3 str. Ether]
 gi|256257699|ref|ZP_05463235.1| 50S ribosomal protein L3 [Brucella abortus bv. 9 str. C68]
 gi|256263780|ref|ZP_05466312.1| ribosomal protein L3 [Brucella melitensis bv. 2 str. 63/9]
 gi|260546692|ref|ZP_05822431.1| ribosomal protein L3 [Brucella abortus NCTC 8038]
 gi|260565515|ref|ZP_05835999.1| ribosomal protein L3 [Brucella melitensis bv. 1 str. 16M]
 gi|260754976|ref|ZP_05867324.1| 50S ribosomal protein L3 [Brucella abortus bv. 6 str. 870]
 gi|260758192|ref|ZP_05870540.1| 50S ribosomal protein L3 [Brucella abortus bv. 4 str. 292]
 gi|260762018|ref|ZP_05874361.1| 50S ribosomal protein L3 [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883985|ref|ZP_05895599.1| 50S ribosomal protein L3 [Brucella abortus bv. 9 str. C68]
 gi|261214230|ref|ZP_05928511.1| 50S ribosomal protein L3 [Brucella abortus bv. 3 str. Tulya]
 gi|265991310|ref|ZP_06103867.1| 50S ribosomal protein L3 [Brucella melitensis bv. 1 str. Rev.1]
 gi|265995147|ref|ZP_06107704.1| 50S ribosomal protein L3 [Brucella melitensis bv. 3 str. Ether]
 gi|297248539|ref|ZP_06932257.1| 50S ribosomal protein L3 [Brucella abortus bv. 5 str. B3196]
 gi|42559669|sp|Q8YHP0|RL3_BRUME RecName: Full=50S ribosomal protein L3
 gi|81309408|sp|Q57CQ8|RL3_BRUAB RecName: Full=50S ribosomal protein L3
 gi|109893414|sp|Q2YM03|RL3_BRUA2 RecName: Full=50S ribosomal protein L3
 gi|226725140|sp|B2S679|RL3_BRUA1 RecName: Full=50S ribosomal protein L3
 gi|254803659|sp|C0RJK1|RL3_BRUMB RecName: Full=50S ribosomal protein L3
 gi|62196276|gb|AAX74576.1| RplC, ribosomal protein L3 [Brucella abortus bv. 1 str. 9-941]
 gi|82616168|emb|CAJ11211.1| Ribosomal protein L3 [Brucella melitensis biovar Abortus 2308]
 gi|189019954|gb|ACD72676.1| Ribosomal protein L3 [Brucella abortus S19]
 gi|225641095|gb|ACO01009.1| 50S ribosomal protein L3 [Brucella melitensis ATCC 23457]
 gi|260095742|gb|EEW79619.1| ribosomal protein L3 [Brucella abortus NCTC 8038]
 gi|260151583|gb|EEW86677.1| ribosomal protein L3 [Brucella melitensis bv. 1 str. 16M]
 gi|260668510|gb|EEX55450.1| 50S ribosomal protein L3 [Brucella abortus bv. 4 str. 292]
 gi|260672450|gb|EEX59271.1| 50S ribosomal protein L3 [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675084|gb|EEX61905.1| 50S ribosomal protein L3 [Brucella abortus bv. 6 str. 870]
 gi|260873513|gb|EEX80582.1| 50S ribosomal protein L3 [Brucella abortus bv. 9 str. C68]
 gi|260915837|gb|EEX82698.1| 50S ribosomal protein L3 [Brucella abortus bv. 3 str. Tulya]
 gi|262766260|gb|EEZ12049.1| 50S ribosomal protein L3 [Brucella melitensis bv. 3 str. Ether]
 gi|263002094|gb|EEZ14669.1| 50S ribosomal protein L3 [Brucella melitensis bv. 1 str. Rev.1]
 gi|263093908|gb|EEZ17842.1| ribosomal protein L3 [Brucella melitensis bv. 2 str. 63/9]
 gi|297175708|gb|EFH35055.1| 50S ribosomal protein L3 [Brucella abortus bv. 5 str. B3196]
 gi|326409255|gb|ADZ66320.1| Ribosomal protein L3 [Brucella melitensis M28]
 gi|326538963|gb|ADZ87178.1| 50S ribosomal protein L3 [Brucella melitensis M5-90]
          Length = 237

 Score =  279 bits (713), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 138/214 (64%), Positives = 164/214 (76%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT VYN  G  +PVTVL ++NC VV  RT++KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+   V PK KL EFRV   D+LL VG   +  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSKAMRGHFAKAEVEPKAKLAEFRVS-PDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           S D  RGLILV+G VPG+ K +WILVRD+ K+++
Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASL 212


>gi|237815652|ref|ZP_04594649.1| 50S ribosomal protein L3 [Brucella abortus str. 2308 A]
 gi|17982696|gb|AAL51938.1| lsu ribosomal protein l3p [Brucella melitensis bv. 1 str. 16M]
 gi|237788950|gb|EEP63161.1| 50S ribosomal protein L3 [Brucella abortus str. 2308 A]
          Length = 245

 Score =  279 bits (713), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 138/214 (64%), Positives = 164/214 (76%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT VYN  G  +PVTVL ++NC VV  RT++KNGY AVQ+G G AKVKN
Sbjct: 9   MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 68

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+   V PK KL EFRV   D+LL VG   +  +F  GQ VDVTG +IGKGF
Sbjct: 69  TSKAMRGHFAKAEVEPKAKLAEFRVS-PDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 127

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 128 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 187

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           S D  RGLILV+G VPG+ K +WILVRD+ K+++
Sbjct: 188 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASL 220


>gi|217976767|ref|YP_002360914.1| 50S ribosomal protein L3 [Methylocella silvestris BL2]
 gi|254803683|sp|B8ELG3|RL3_METSB RecName: Full=50S ribosomal protein L3
 gi|217502143|gb|ACK49552.1| ribosomal protein L3 [Methylocella silvestris BL2]
          Length = 245

 Score =  279 bits (713), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 140/214 (65%), Positives = 164/214 (76%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT V+N  G  +PVTVL LD CQVV HRT ++NGY A+Q+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRVFNDGGEHVPVTVLKLDGCQVVAHRTKERNGYTALQLGIGRAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK  RG F+   V PK KL EFRV+ + DLLPVG+  +  +F VGQ VDVTG +IGKGF
Sbjct: 61  VSKAERGRFAIAEVEPKLKLAEFRVE-ESDLLPVGAEITADHFVVGQFVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVS+SHRSHGSTG RQDPG+ FKNKKMAG MG  RVT  NL+VV
Sbjct: 120 AGPMKRWNFGGLRATHGVSLSHRSHGSTGGRQDPGKTFKNKKMAGHMGAERVTTLNLKVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            +D +RGLILV+G VPG     WI VRD+ K A+
Sbjct: 180 QLDIERGLILVEGAVPGV-AGGWIQVRDAIKRAL 212


>gi|148560391|ref|YP_001259153.1| 50S ribosomal protein L3 [Brucella ovis ATCC 25840]
 gi|161619189|ref|YP_001593076.1| 50S ribosomal protein L3 [Brucella canis ATCC 23365]
 gi|163843499|ref|YP_001627903.1| 50S ribosomal protein L3 [Brucella suis ATCC 23445]
 gi|254701974|ref|ZP_05163802.1| 50S ribosomal protein L3 [Brucella suis bv. 5 str. 513]
 gi|254704518|ref|ZP_05166346.1| 50S ribosomal protein L3 [Brucella suis bv. 3 str. 686]
 gi|254706586|ref|ZP_05168414.1| 50S ribosomal protein L3 [Brucella pinnipedialis M163/99/10]
 gi|254710304|ref|ZP_05172115.1| 50S ribosomal protein L3 [Brucella pinnipedialis B2/94]
 gi|254719291|ref|ZP_05181102.1| 50S ribosomal protein L3 [Brucella sp. 83/13]
 gi|256031798|ref|ZP_05445412.1| 50S ribosomal protein L3 [Brucella pinnipedialis M292/94/1]
 gi|256061313|ref|ZP_05451463.1| 50S ribosomal protein L3 [Brucella neotomae 5K33]
 gi|256369657|ref|YP_003107167.1| 50S ribosomal protein L3 [Brucella microti CCM 4915]
 gi|260168932|ref|ZP_05755743.1| 50S ribosomal protein L3 [Brucella sp. F5/99]
 gi|260566238|ref|ZP_05836708.1| ribosomal protein L3 [Brucella suis bv. 4 str. 40]
 gi|261314046|ref|ZP_05953243.1| 50S ribosomal protein L3 [Brucella pinnipedialis M163/99/10]
 gi|261317867|ref|ZP_05957064.1| 50S ribosomal protein L3 [Brucella pinnipedialis B2/94]
 gi|261325320|ref|ZP_05964517.1| 50S ribosomal protein L3 [Brucella neotomae 5K33]
 gi|261752542|ref|ZP_05996251.1| 50S ribosomal protein L3 [Brucella suis bv. 5 str. 513]
 gi|261755201|ref|ZP_05998910.1| 50S ribosomal protein L3 [Brucella suis bv. 3 str. 686]
 gi|261758425|ref|ZP_06002134.1| ribosomal protein L3 [Brucella sp. F5/99]
 gi|265984291|ref|ZP_06097026.1| 50S ribosomal protein L3 [Brucella sp. 83/13]
 gi|265988896|ref|ZP_06101453.1| 50S ribosomal protein L3 [Brucella pinnipedialis M292/94/1]
 gi|294852570|ref|ZP_06793243.1| 50S ribosomal protein L3 [Brucella sp. NVSL 07-0026]
 gi|306838043|ref|ZP_07470901.1| 50S ribosomal protein L3 [Brucella sp. NF 2653]
 gi|306840301|ref|ZP_07473073.1| 50S ribosomal protein L3 [Brucella sp. BO2]
 gi|306844137|ref|ZP_07476731.1| 50S ribosomal protein L3 [Brucella sp. BO1]
 gi|166233122|sp|A5VR06|RL3_BRUO2 RecName: Full=50S ribosomal protein L3
 gi|189042833|sp|A9M5Q0|RL3_BRUC2 RecName: Full=50S ribosomal protein L3
 gi|189042834|sp|B0CH32|RL3_BRUSI RecName: Full=50S ribosomal protein L3
 gi|148371648|gb|ABQ61627.1| ribosomal protein L3 [Brucella ovis ATCC 25840]
 gi|161336000|gb|ABX62305.1| 50S ribosomal protein L3 [Brucella canis ATCC 23365]
 gi|163674222|gb|ABY38333.1| 50S ribosomal protein L3 [Brucella suis ATCC 23445]
 gi|255999819|gb|ACU48218.1| 50S ribosomal protein L3 [Brucella microti CCM 4915]
 gi|260155756|gb|EEW90836.1| ribosomal protein L3 [Brucella suis bv. 4 str. 40]
 gi|261297090|gb|EEY00587.1| 50S ribosomal protein L3 [Brucella pinnipedialis B2/94]
 gi|261301300|gb|EEY04797.1| 50S ribosomal protein L3 [Brucella neotomae 5K33]
 gi|261303072|gb|EEY06569.1| 50S ribosomal protein L3 [Brucella pinnipedialis M163/99/10]
 gi|261738409|gb|EEY26405.1| ribosomal protein L3 [Brucella sp. F5/99]
 gi|261742295|gb|EEY30221.1| 50S ribosomal protein L3 [Brucella suis bv. 5 str. 513]
 gi|261744954|gb|EEY32880.1| 50S ribosomal protein L3 [Brucella suis bv. 3 str. 686]
 gi|264661093|gb|EEZ31354.1| 50S ribosomal protein L3 [Brucella pinnipedialis M292/94/1]
 gi|264662883|gb|EEZ33144.1| 50S ribosomal protein L3 [Brucella sp. 83/13]
 gi|294821159|gb|EFG38158.1| 50S ribosomal protein L3 [Brucella sp. NVSL 07-0026]
 gi|306275580|gb|EFM57312.1| 50S ribosomal protein L3 [Brucella sp. BO1]
 gi|306289700|gb|EFM60889.1| 50S ribosomal protein L3 [Brucella sp. BO2]
 gi|306406967|gb|EFM63188.1| 50S ribosomal protein L3 [Brucella sp. NF 2653]
          Length = 237

 Score =  279 bits (713), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 138/214 (64%), Positives = 164/214 (76%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT VYN  G  +PVTVL ++NC VV  RT++KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+   V PK KL EFRV   D+LL VG   +  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSKAMRGHFAKAEVEPKAKLAEFRVS-PDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           S D  RGLILV+G VPG+ K +WILVRD+ K+++
Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASL 212


>gi|225627703|ref|ZP_03785740.1| 50S ribosomal protein L3 [Brucella ceti str. Cudo]
 gi|225617708|gb|EEH14753.1| 50S ribosomal protein L3 [Brucella ceti str. Cudo]
          Length = 245

 Score =  279 bits (713), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 138/214 (64%), Positives = 164/214 (76%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT VYN  G  +PVTVL ++NC VV  RT++KNGY AVQ+G G AKVKN
Sbjct: 9   MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 68

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+   V PK KL EFRV   D+LL VG   +  +F  GQ VDVTG +IGKGF
Sbjct: 69  TSKAMRGHFAKAEVEPKAKLAEFRVS-PDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 127

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 128 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 187

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           S D  RGLILV+G VPG+ K +WILVRD+ K+++
Sbjct: 188 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASL 220


>gi|23502110|ref|NP_698237.1| 50S ribosomal protein L3 [Brucella suis 1330]
 gi|42559647|sp|Q8G076|RL3_BRUSU RecName: Full=50S ribosomal protein L3
 gi|23348070|gb|AAN30152.1| ribosomal protein L3 [Brucella suis 1330]
          Length = 237

 Score =  278 bits (712), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 138/214 (64%), Positives = 164/214 (76%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT VYN  G  +PVTVL ++NC VV  RT++KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGVAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+   V PK KL EFRV   D+LL VG   +  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSKAMRGHFAKAEVEPKAKLAEFRVS-PDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           S D  RGLILV+G VPG+ K +WILVRD+ K+++
Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASL 212


>gi|254714301|ref|ZP_05176112.1| 50S ribosomal protein L3 [Brucella ceti M644/93/1]
 gi|254717738|ref|ZP_05179549.1| 50S ribosomal protein L3 [Brucella ceti M13/05/1]
 gi|261219581|ref|ZP_05933862.1| 50S ribosomal protein L3 [Brucella ceti M13/05/1]
 gi|261322076|ref|ZP_05961273.1| 50S ribosomal protein L3 [Brucella ceti M644/93/1]
 gi|260924670|gb|EEX91238.1| 50S ribosomal protein L3 [Brucella ceti M13/05/1]
 gi|261294766|gb|EEX98262.1| 50S ribosomal protein L3 [Brucella ceti M644/93/1]
          Length = 237

 Score =  278 bits (712), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 137/214 (64%), Positives = 164/214 (76%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT VYN  G  +PVT+L ++NC VV  RT++KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRVYNDAGEHVPVTILRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+   V PK KL EFRV   D+LL VG   +  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSKAMRGHFAKAEVEPKAKLAEFRVS-PDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           S D  RGLILV+G VPG+ K +WILVRD+ K+++
Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASL 212


>gi|260432429|ref|ZP_05786400.1| 50S ribosomal protein L3 [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416257|gb|EEX09516.1| 50S ribosomal protein L3 [Silicibacter lacuscaerulensis ITI-1157]
          Length = 242

 Score =  277 bits (708), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 134/211 (63%), Positives = 164/211 (77%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  +GR+IPVTVLHLDN QVV  RT DK+GY AVQ+GAG AK K 
Sbjct: 2   MRSGIIAKKVGMTRLFMEDGRQIPVTVLHLDNLQVVAQRTADKDGYTAVQLGAGAAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F++  V PK+KL EFRV  +D L+ VG+  S  +F  GQ VDV+G +IGKGF
Sbjct: 62  TSKAMRGHFAAAKVEPKRKLAEFRVS-EDALIEVGAEISADHFVEGQKVDVSGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGL+ +KG VPG  K+ W+ V+D+ K
Sbjct: 181 KTDAERGLVFIKGAVPG-PKSGWVTVKDAVK 210


>gi|114704484|ref|ZP_01437392.1| 50S ribosomal protein L3 [Fulvimarina pelagi HTCC2506]
 gi|114539269|gb|EAU42389.1| 50S ribosomal protein L3 [Fulvimarina pelagi HTCC2506]
          Length = 241

 Score =  277 bits (708), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 133/214 (62%), Positives = 167/214 (78%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT +Y   G  +PVTVL ++N QVV  RT DKNGY AVQVGAG AKVKN
Sbjct: 1   MRSGVIAQKVGMTRIYTDAGEHVPVTVLKVENLQVVGQRTQDKNGYTAVQVGAGLAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+   V PK+KL EFRV  +D+++ +G+  +  +F  GQ+VDVTG +IGKGF
Sbjct: 61  TSKAMRGVFAQAKVEPKRKLVEFRV-TEDNMIDIGAEITADHFVEGQMVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGG+RATHGVSISHR+HGSTG  QDPG+VFK KKMAG MG  RVT +NL++V
Sbjct: 120 AGAMKRHNFGGMRATHGVSISHRAHGSTGQNQDPGKVFKGKKMAGHMGQERVTTQNLQIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
             D ++GLILV+G VPGA K  WI +RD+ K+++
Sbjct: 180 RTDAEKGLILVRGAVPGA-KGGWIEIRDAVKASL 212


>gi|256159968|ref|ZP_05457686.1| 50S ribosomal protein L3 [Brucella ceti M490/95/1]
 gi|256255199|ref|ZP_05460735.1| 50S ribosomal protein L3 [Brucella ceti B1/94]
 gi|261222395|ref|ZP_05936676.1| 50S ribosomal protein L3 [Brucella ceti B1/94]
 gi|265998360|ref|ZP_06110917.1| 50S ribosomal protein L3 [Brucella ceti M490/95/1]
 gi|260920979|gb|EEX87632.1| 50S ribosomal protein L3 [Brucella ceti B1/94]
 gi|262552828|gb|EEZ08818.1| 50S ribosomal protein L3 [Brucella ceti M490/95/1]
          Length = 237

 Score =  277 bits (708), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 137/214 (64%), Positives = 163/214 (76%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT VYN  G  +PVTVL ++NC VV  RT++KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+   V PK KL EFRV   D+LL VG   +  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSKAMRGHFAKAEVEPKAKLAEFRVS-PDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG  A+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHHASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           S D  RGLILV+G VPG+ K +WILVRD+ K+++
Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASL 212


>gi|110634030|ref|YP_674238.1| 50S ribosomal protein L3 [Mesorhizobium sp. BNC1]
 gi|122965958|sp|Q11HQ2|RL3_MESSB RecName: Full=50S ribosomal protein L3
 gi|110285014|gb|ABG63073.1| LSU ribosomal protein L3P [Chelativorans sp. BNC1]
          Length = 242

 Score =  276 bits (706), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 137/214 (64%), Positives = 166/214 (77%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  IPVTVL ++NCQVV  RT +KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKIGMTRVYNETGEHIPVTVLRMENCQVVAQRTEEKNGYTAVQLGVGLAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK +RG F++ +V PK K+ EFRV   ++LL VG+  +  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSKALRGHFAAASVEPKAKVAEFRVS-PENLLDVGAEITADHFVPGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G MKRHNFGG RATHG S+SHR+HGSTG RQDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 120 QGVMKRHNFGGGRATHGNSVSHRTHGSTGQRQDPGKVFKGKKMAGHMGDRRVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           S D +RGLILV+G VPG+ K SWI+VRD+ K+ +
Sbjct: 180 STDTERGLILVRGAVPGS-KGSWIMVRDAVKAPL 212


>gi|296447530|ref|ZP_06889452.1| 50S ribosomal protein L3 [Methylosinus trichosporium OB3b]
 gi|296254918|gb|EFH02023.1| 50S ribosomal protein L3 [Methylosinus trichosporium OB3b]
          Length = 237

 Score =  276 bits (706), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 137/217 (63%), Positives = 165/217 (76%), Gaps = 2/217 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  +PVTVL LD CQVV HRT+++NGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKVGMTRVFTEAGEHVPVTVLKLDGCQVVAHRTMEQNGYTAVQLGIGRAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK  RG F+   V PK KL EFRV  + +LLPVG+  +  +F VGQ VDVTG ++GKGF
Sbjct: 61  VSKAERGRFAIAKVEPKLKLAEFRV-AESELLPVGAEITADHFVVGQFVDVTGTSLGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPG+ FKNKKMAG MG +RVT +NL VV
Sbjct: 120 AGAMKRWNFGGLRATHGVSVSHRSHGSTGGRQDPGKTFKNKKMAGHMGVDRVTTQNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
             D +RGL+LV+G VPG     WI VRD+ K A+  +
Sbjct: 180 QTDVERGLLLVEGSVPG-HAGGWIFVRDAVKRALPAE 215


>gi|163760799|ref|ZP_02167878.1| 50S ribosomal protein L3 [Hoeflea phototrophica DFL-43]
 gi|162281843|gb|EDQ32135.1| 50S ribosomal protein L3 [Hoeflea phototrophica DFL-43]
          Length = 223

 Score =  276 bits (705), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 136/203 (66%), Positives = 158/203 (77%), Gaps = 2/203 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT VYN  G  +PVTVL L+NCQVV  RT +KNGY AVQ+GAG AKVKN SK MRG F+ 
Sbjct: 1   MTRVYNDAGEHVPVTVLRLENCQVVAQRTEEKNGYTAVQLGAGVAKVKNTSKAMRGNFAI 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
            NV PK KL EFRV   D+L+ VG+  S S+F  GQLVDV+G+T GKGF+GAMKRH FGG
Sbjct: 61  ANVEPKAKLVEFRVS-SDNLIDVGAEISASHFVAGQLVDVSGVTQGKGFAGAMKRHGFGG 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
           LRATHGVS+SHRSHGSTG  QDPG+V+K KKMAG MG  RVT +NLE+VS D  RGLIL+
Sbjct: 120 LRATHGVSVSHRSHGSTGSNQDPGKVWKGKKMAGHMGQTRVTTQNLEIVSTDADRGLILI 179

Query: 192 KGCVPGAKKNSWILVRDSFKSAV 214
           KG VPG+ K SWI+VRD+ KS +
Sbjct: 180 KGAVPGS-KGSWIVVRDAIKSGI 201


>gi|239832122|ref|ZP_04680451.1| 50S ribosomal protein L3 [Ochrobactrum intermedium LMG 3301]
 gi|239824389|gb|EEQ95957.1| 50S ribosomal protein L3 [Ochrobactrum intermedium LMG 3301]
          Length = 246

 Score =  276 bits (705), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 135/211 (63%), Positives = 162/211 (76%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT VYN  G  +PVTVL ++NC VV  RT++KNGY AVQ+G G AKVKN
Sbjct: 9   MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGIAKVKN 68

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+   V PK K+ EFRV   D+LL VG+  +  +F  GQ VDVTG +IGKGF
Sbjct: 69  TSKAMRGHFAKAEVEPKAKVAEFRVS-PDNLLEVGAEITAEHFVAGQKVDVTGTSIGKGF 127

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HR+HGSTG RQDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 128 AGVMKRHNFGGHRASHGNSITHRAHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 187

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           S D  RGLILV+G VPG+ K +WI+VRD+ K
Sbjct: 188 STDSDRGLILVRGAVPGS-KGAWIIVRDAVK 217


>gi|304391453|ref|ZP_07373395.1| 50S ribosomal protein L3 [Ahrensia sp. R2A130]
 gi|303295682|gb|EFL90040.1| 50S ribosomal protein L3 [Ahrensia sp. R2A130]
          Length = 277

 Score =  275 bits (702), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 134/215 (62%), Positives = 170/215 (79%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT +Y  EG  +PVTVL +++ QV+  RT +K+GY AVQ+GAG+AKVKN
Sbjct: 1   MRSGVIAQKVGMTRIYTDEGINVPVTVLRMEHVQVIAQRTEEKHGYTAVQLGAGKAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKPMRG F+   V PK+KL EFRV  +++L+PVG+    +++  GQ VDVTG TIGKGF
Sbjct: 61  VSKPMRGHFAVAKVEPKRKLAEFRVT-EENLVPVGAEIIAAHYMPGQFVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVS+SHRSHGSTG  QDPG+VFK K+MAG MG  RVT +N++VV
Sbjct: 120 AGAMKRHNFGGLRASHGVSVSHRSHGSTGQCQDPGKVFKGKRMAGHMGNTRVTTQNIQVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           SVD  RGL+LVKG VPG  K  W+ +RD+ K  V+
Sbjct: 180 SVDVDRGLVLVKGAVPGP-KGGWVTLRDAIKKPVH 213


>gi|153009286|ref|YP_001370501.1| 50S ribosomal protein L3 [Ochrobactrum anthropi ATCC 49188]
 gi|166233170|sp|A6X0B8|RL3_OCHA4 RecName: Full=50S ribosomal protein L3
 gi|151561174|gb|ABS14672.1| ribosomal protein L3 [Ochrobactrum anthropi ATCC 49188]
          Length = 238

 Score =  274 bits (700), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 134/211 (63%), Positives = 161/211 (76%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT VYN  G  +PVTVL ++NC VV  RT++KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGLAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+   V PK K+ EFRV   D+LL VG+  +  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSKAMRGHFAKAEVEPKAKVAEFRVS-PDNLLEVGAEITAEHFVAGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNF G RA+HG SI+HR+HGSTG RQDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 120 AGVMKRHNFAGHRASHGNSITHRAHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           S D  RGLILV+G VPG+ K +WI+VRD+ K
Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWIIVRDAVK 209


>gi|126739691|ref|ZP_01755383.1| 50S ribosomal protein L3 [Roseobacter sp. SK209-2-6]
 gi|126719337|gb|EBA16047.1| 50S ribosomal protein L3 [Roseobacter sp. SK209-2-6]
          Length = 234

 Score =  273 bits (698), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 135/211 (63%), Positives = 164/211 (77%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  +G++IPVTVLHLD  QVV  RT DK+GY AVQ+GAG AKVK 
Sbjct: 1   MRSGIIAKKVGMTRLFMEDGQQIPVTVLHLDGLQVVSQRTEDKDGYTAVQLGAGSAKVKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK MRG F++  V PK+KL EFRV  D  L+ VG+  S  +F  GQ VDVTG +IGKGF
Sbjct: 61  VSKAMRGHFAASKVEPKRKLVEFRVPADA-LIEVGAEISAEHFLEGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGL+ +KG VPG  K+ W+ V+D+ K
Sbjct: 180 KTDAERGLVFIKGAVPGP-KSGWVTVKDAVK 209


>gi|85709057|ref|ZP_01040123.1| 50S ribosomal protein L3 [Erythrobacter sp. NAP1]
 gi|85690591|gb|EAQ30594.1| 50S ribosomal protein L3 [Erythrobacter sp. NAP1]
          Length = 273

 Score =  273 bits (697), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 132/211 (62%), Positives = 162/211 (76%), Gaps = 1/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR +PVTVL L++CQVV HRT D +GY AVQ+GAGEAK KN
Sbjct: 1   MRTGVIAKKVGMTRLFQEDGRHVPVTVLALEDCQVVSHRTADNDGYFAVQLGAGEAKQKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP R  F    V  K+++ EFRV+ ++ L+PVGS+ S  +F  GQ VD+TG T GKGF
Sbjct: 61  VAKPQREHFGKAGVGLKQRVAEFRVENEEGLVPVGSLISADHFVAGQKVDITGHTQGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR  FGGLRATHGVSISHRSHGSTG RQDPGRVFK KKMAG MG  + T  NLEVV
Sbjct: 121 AGAMKRWGFGGLRATHGVSISHRSHGSTGNRQDPGRVFKGKKMAGHMGDRQRTQMNLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RGL+ +KG VPG+ KN W+LVRD+ K
Sbjct: 181 RTDADRGLLFIKGSVPGS-KNGWLLVRDAIK 210


>gi|56698636|ref|YP_169013.1| 50S ribosomal protein L3 [Ruegeria pomeroyi DSS-3]
 gi|81819888|sp|Q5LLU6|RL3_SILPO RecName: Full=50S ribosomal protein L3
 gi|56680373|gb|AAV97039.1| ribosomal protein L3 [Ruegeria pomeroyi DSS-3]
          Length = 241

 Score =  273 bits (697), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 132/211 (62%), Positives = 164/211 (77%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  +G++IPVTVL LDN QVV  RT +K+GY AVQ+GAG  K+K 
Sbjct: 1   MRSGIIAKKVGMTRLFMEDGKQIPVTVLQLDNLQVVAQRTTEKDGYTAVQLGAGTPKIKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK MRG F++  V PK+KL EFRV  +D L+ VG+  S  +F  GQ VDV+G +IGKGF
Sbjct: 61  VSKAMRGHFAAQKVEPKRKLAEFRVS-EDALIEVGAEISAEHFLTGQKVDVSGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPGRVFK KKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGRVFKGKKMAGHMGAARVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGL+ +KG VPG  K+ W+ V+D+ K
Sbjct: 180 KTDAERGLVFIKGAVPGP-KSGWVTVKDAVK 209


>gi|288957422|ref|YP_003447763.1| large subunit ribosomal protein L3 [Azospirillum sp. B510]
 gi|288909730|dbj|BAI71219.1| large subunit ribosomal protein L3 [Azospirillum sp. B510]
          Length = 236

 Score =  273 bits (697), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 134/211 (63%), Positives = 168/211 (79%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT V+  +G+ +PVTVL +D+CQVV  RT +K+GY AVQ+GAG  KVKN
Sbjct: 1   MRSGLIAQKVGMTRVFTDDGQHVPVTVLKVDSCQVVAVRTEEKDGYTAVQLGAGAIKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP RG F+   V PK+KL EFRV  D  L+ VG+  S ++F  GQ VDVTG +IGKGF
Sbjct: 61  VNKPERGHFAKARVEPKRKLVEFRVDADA-LIEVGAELSVTHFVAGQYVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG +G  RVTV NL+VV
Sbjct: 120 AGAMKRWNFGGLRATHGVSVSHRSHGSTGNRQDPGKVFKNKKMAGHLGDERVTVLNLQVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +VD+ RGLI++KG VPGA +  W+ +RD+ K
Sbjct: 180 AVDEARGLIMLKGAVPGA-EGGWLRIRDAVK 209


>gi|254466883|ref|ZP_05080294.1| ribosomal protein L3 [Rhodobacterales bacterium Y4I]
 gi|206687791|gb|EDZ48273.1| ribosomal protein L3 [Rhodobacterales bacterium Y4I]
          Length = 234

 Score =  272 bits (696), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 132/211 (62%), Positives = 162/211 (76%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  +G++IPVTVLHLD  QVV  RT DK+GY AVQ+GAG AK K 
Sbjct: 1   MRSGIIAKKVGMTRLFMEDGKQIPVTVLHLDGLQVVAQRTEDKDGYTAVQLGAGTAKAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ MRG F++  V PK+KL EFRV  D  L+ VG+  S  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSQAMRGHFAAAKVEPKRKLVEFRVPADA-LIEVGAEISAEHFLAGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGL+ +KG VPG  K+ W+ V+D+ K
Sbjct: 180 KTDAERGLVFIKGAVPG-PKSGWVTVKDAVK 209


>gi|149184311|ref|ZP_01862629.1| 50S ribosomal protein L3 [Erythrobacter sp. SD-21]
 gi|148831631|gb|EDL50064.1| 50S ribosomal protein L3 [Erythrobacter sp. SD-21]
          Length = 285

 Score =  272 bits (695), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 131/211 (62%), Positives = 161/211 (76%), Gaps = 1/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR +PVTVL L++CQV  HRT D++GY  VQVG+GEAK KN
Sbjct: 1   MRTGVIAKKVGMTRLFQEDGRHVPVTVLSLEDCQVTAHRTEDRDGYYGVQVGSGEAKQKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP R  F+   V+ K K+ EFRV  ++ LLPVG+  S  +F  GQ VD+TG T GKGF
Sbjct: 61  VNKPQREAFAKAEVALKMKVGEFRVDSEEALLPVGARISAEHFVAGQKVDITGHTQGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR  FGGLRATHGVSISHRSHGSTG RQDPGRVFK KKMAG MG  + T +NLE+V
Sbjct: 121 AGAMKRWGFGGLRATHGVSISHRSHGSTGNRQDPGRVFKGKKMAGHMGDRQRTQQNLEIV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RGL+ VKG VPGA KN W++VRD+ K
Sbjct: 181 RTDADRGLLFVKGSVPGA-KNGWLMVRDAVK 210


>gi|87199270|ref|YP_496527.1| 50S ribosomal protein L3 [Novosphingobium aromaticivorans DSM
           12444]
 gi|109893532|sp|Q2G8Y0|RL3_NOVAD RecName: Full=50S ribosomal protein L3
 gi|87134951|gb|ABD25693.1| LSU ribosomal protein L3P [Novosphingobium aromaticivorans DSM
           12444]
          Length = 251

 Score =  272 bits (695), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 134/211 (63%), Positives = 165/211 (78%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR +PVTVL L+NCQVV  RT +++GY+A+Q+GAGEAK KN
Sbjct: 1   MRTGVIAKKVGMTRLFQEDGRHVPVTVLSLENCQVVSVRTAERDGYVALQLGAGEAKQKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP R  F+   V  K ++ EFRV  DD LL VGS  + S+F  GQ VD+TG T GKGF
Sbjct: 61  VAKPQREHFAKAEVPLKMEVAEFRV-ADDALLDVGSTIAASHFVPGQYVDITGQTQGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GAMKR  FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG  + T +NLEVV
Sbjct: 120 QGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRQRTQQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             DD+RGLI VKG VPG+ KN+W+LVRD+ K
Sbjct: 180 RTDDERGLIFVKGSVPGS-KNAWLLVRDAVK 209


>gi|85374465|ref|YP_458527.1| 50S ribosomal protein L3 [Erythrobacter litoralis HTCC2594]
 gi|123293706|sp|Q2N9B1|RL3_ERYLH RecName: Full=50S ribosomal protein L3
 gi|84787548|gb|ABC63730.1| ribosomal protein L3 [Erythrobacter litoralis HTCC2594]
          Length = 289

 Score =  272 bits (695), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 132/211 (62%), Positives = 162/211 (76%), Gaps = 1/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR +PVTVL L++CQVV  RT +++GY A+QVG+G AK KN
Sbjct: 1   MRTGVIAKKVGMTRLFQEDGRHVPVTVLALEDCQVVSQRTQERDGYFALQVGSGVAKQKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP R  F+   V  K K+ EFRV+ +D LLPVG+  S  +F  GQ VD+TG T GKGF
Sbjct: 61  VAKPQREAFAKAEVGLKMKVAEFRVEGEDGLLPVGAAISAEHFIAGQKVDITGYTQGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR  FGGLRATHGVSISHRSHGSTG RQDPGRVFK KKMAG MG  + T +NLEVV
Sbjct: 121 AGAMKRWGFGGLRATHGVSISHRSHGSTGNRQDPGRVFKGKKMAGHMGDRQRTQQNLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGLI VKG VPG  KNSW+L+RD+ K
Sbjct: 181 RTDPERGLIFVKGSVPGT-KNSWMLIRDAVK 210


>gi|13470551|ref|NP_102120.1| 50S ribosomal protein L3 [Mesorhizobium loti MAFF303099]
 gi|42559683|sp|Q98N57|RL3_RHILO RecName: Full=50S ribosomal protein L3
 gi|14021293|dbj|BAB47906.1| 50S ribosomal protein L3 [Mesorhizobium loti MAFF303099]
          Length = 237

 Score =  271 bits (694), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 131/214 (61%), Positives = 164/214 (76%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT +YN  G  +PVTVL ++NCQVV  RT +KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAKKVGMTRIYNDAGEHVPVTVLQMENCQVVAQRTQEKNGYTAVQLGVGLAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F++ +V PK K+ EFRV  D+ ++ VG+  +  +F  GQ VDVTG TIGKGF
Sbjct: 61  TSKAMRGHFATASVEPKAKVAEFRVSADN-MIDVGAEITVEHFVAGQKVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH+ GG RATHG S+SHR+HGSTG RQDPG+VFK KKMAG MG  RVT +N+E+V
Sbjct: 120 QGVIKRHHMGGGRATHGNSVSHRTHGSTGQRQDPGKVFKGKKMAGHMGDTRVTTQNVEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           S D  RGLIL++G VPG+ K +WILVRD+ K A+
Sbjct: 180 STDADRGLILIRGAVPGS-KGAWILVRDAAKVAL 212


>gi|326388197|ref|ZP_08209800.1| 50S ribosomal protein L3 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326207363|gb|EGD58177.1| 50S ribosomal protein L3 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 241

 Score =  271 bits (694), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 132/211 (62%), Positives = 166/211 (78%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR +PVTVL L++CQVV  RT +++GY+A+Q+GAGEAK KN
Sbjct: 1   MRTGVIAKKVGMTRLFQEDGRHVPVTVLSLEDCQVVSVRTAERDGYVALQLGAGEAKQKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP R  F+   V  K ++ EFRV  DD +L VGS  + S+F +GQLVD+TG T GKGF
Sbjct: 61  VAKPQREHFAKAEVPLKAEVAEFRV-ADDAVLEVGSTIAASHFAIGQLVDITGHTQGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR  FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG  + T +NLE+V
Sbjct: 120 AGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRQRTQQNLEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             DD RGLI VKG VPG+ KN W+LVRD+ K
Sbjct: 180 RTDDARGLIFVKGSVPGS-KNGWLLVRDAVK 209


>gi|296282582|ref|ZP_06860580.1| 50S ribosomal protein L3 [Citromicrobium bathyomarinum JL354]
          Length = 278

 Score =  271 bits (693), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 131/211 (62%), Positives = 162/211 (76%), Gaps = 1/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR +PVTVL L+ CQV  +RT D++GY +VQVG+GEAK KN
Sbjct: 1   MRTGVIAKKVGMTRLFQEDGRHVPVTVLALEGCQVTANRTADRDGYWSVQVGSGEAKQKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP R  F+   V  K K+ EFRV+ +D LLPVG+  +  +F  GQ VDV G T GKGF
Sbjct: 61  VNKPQREAFAKAEVGLKMKVAEFRVEGEDALLPVGATITADHFIAGQKVDVQGYTQGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR  FGGLRATHGVS+SHRSHGSTG RQDPGRVFKNKKMAG MG  + T +NLE+V
Sbjct: 121 AGAMKRWGFGGLRATHGVSLSHRSHGSTGNRQDPGRVFKNKKMAGHMGDRQRTQQNLEIV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGL+ VKG VPGA KNSW+LV D+ K
Sbjct: 181 RTDSERGLLFVKGSVPGA-KNSWMLVADAVK 210


>gi|182678337|ref|YP_001832483.1| 50S ribosomal protein L3 [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|226725134|sp|B2IK62|RL3_BEII9 RecName: Full=50S ribosomal protein L3
 gi|182634220|gb|ACB94994.1| ribosomal protein L3 [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 240

 Score =  270 bits (691), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 139/211 (65%), Positives = 158/211 (74%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT V+   G  IPVTVL LD CQVV HRT ++NGY+AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRVFTDAGEHIPVTVLKLDGCQVVGHRTKEQNGYVAVQLGIGRAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK  RG F+   V PK KL EFRV  D  LLP+G+  +  +F VGQ VDVTG + GKGF
Sbjct: 61  VSKAERGRFAVAKVEPKLKLAEFRVD-DATLLPIGAEITADHFVVGQFVDVTGTSTGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRATHGVSISHRSHGSTG RQDPG+ FKNKKMAG +G  RVT  NL VV
Sbjct: 120 AGAMKRWNFGGLRATHGVSISHRSHGSTGGRQDPGKTFKNKKMAGHLGTERVTTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGLILV+G VPG     WI VRD+ K
Sbjct: 180 QTDVERGLILVEGAVPGT-AGGWIYVRDAVK 209


>gi|294085958|ref|YP_003552718.1| 50S ribosomal protein L3 [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292665533|gb|ADE40634.1| 50S ribosomal protein L3 [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 275

 Score =  269 bits (688), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 134/212 (63%), Positives = 160/212 (75%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++ARKLGMT V+N  G  +PVTVL +D+ QVV  R    +GY AVQ+GAG AK KN
Sbjct: 1   MRSGIIARKLGMTRVFNEAGHHVPVTVLKMDDVQVVSVRNKQVDGYTAVQLGAGMAKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKPMRG F+  NV PK KL EFRV  DD +L VG+   PS+F  GQ VDV G T GKGF
Sbjct: 61  VSKPMRGHFAKANVLPKSKLVEFRVS-DDAVLDVGATLVPSHFVAGQKVDVVGTTQGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNF GLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  R T +N+EVV
Sbjct: 120 AGAMKRHNFAGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRNTTQNIEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +VDD+ G++L+ G VPG  KN W+L+ D+ K+
Sbjct: 180 AVDDEEGVVLLCGAVPG-PKNGWVLISDAIKA 210


>gi|323136086|ref|ZP_08071169.1| 50S ribosomal protein L3 [Methylocystis sp. ATCC 49242]
 gi|322399177|gb|EFY01696.1| 50S ribosomal protein L3 [Methylocystis sp. ATCC 49242]
          Length = 240

 Score =  268 bits (686), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 135/214 (63%), Positives = 159/214 (74%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  +PVTVL LD CQVV  RT +KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKVGMTRVFTEAGEHVPVTVLKLDGCQVVAQRTKEKNGYTAVQLGIGRAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK  R  F++  V PK KL EFRV  +++LLPVG+  +  +F VGQ VDVTG T GKGF
Sbjct: 61  VSKAERTRFAAAKVEPKMKLAEFRVN-EEELLPVGAEITADHFVVGQFVDVTGTTTGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR  FGGLRA+HGVSISHRSHGSTG RQDPG+ FKNKKMAG MG  RVT +NL VV
Sbjct: 120 AGPMKRWGFGGLRASHGVSISHRSHGSTGGRQDPGKTFKNKKMAGHMGVERVTTQNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
             D +RGL+LV+G VPG     WI VRD+ K A+
Sbjct: 180 QTDVERGLVLVEGAVPGT-AGGWIFVRDAVKRAL 212


>gi|114764144|ref|ZP_01443382.1| 50S ribosomal protein L3 [Pelagibaca bermudensis HTCC2601]
 gi|114543296|gb|EAU46312.1| 50S ribosomal protein L3 [Roseovarius sp. HTCC2601]
          Length = 280

 Score =  268 bits (686), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 131/211 (62%), Positives = 163/211 (77%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT ++  +G+++PVTVL LD CQVV  RT DK+GY AVQ+GAG  K KN
Sbjct: 2   MRSGVIAKKVGMTRLFLEDGKQVPVTVLQLDGCQVVAQRTSDKDGYTAVQLGAGSVKAKN 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKPMRG F+   V PK+K+ EFRV  ++ L+ VG   +  ++  GQ VDV+G TIGKGF
Sbjct: 62  VSKPMRGHFAIAKVEPKRKIAEFRVDAEN-LIGVGEEITADHYFEGQFVDVSGTTIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RGLI++KG VPG+ K  W+ ++D+ K
Sbjct: 181 KTDASRGLIMIKGAVPGS-KGGWVTIKDAVK 210


>gi|319783320|ref|YP_004142796.1| 50S ribosomal protein L3 [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169208|gb|ADV12746.1| 50S ribosomal protein L3 [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 242

 Score =  268 bits (686), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 130/214 (60%), Positives = 163/214 (76%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT +YN  G  +PVTVL ++NCQVV  RT +KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAKKVGMTRIYNDAGEHVPVTVLLMENCQVVAQRTQEKNGYTAVQLGVGLAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F++ +V PK K+ EFRV  D+ ++ VG+  +  +F  GQ VDVTG TIGKGF
Sbjct: 61  TSKAMRGHFATASVEPKAKVAEFRVSADN-MIDVGAEITVEHFVAGQKVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH+ GG RATHG S+SHR+HGSTG RQDPG+VFK K MAG MG  RVT +N+E+V
Sbjct: 120 QGVIKRHHMGGGRATHGNSVSHRTHGSTGQRQDPGKVFKGKHMAGHMGDTRVTTQNVEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           S D  RGLIL++G VPG+ K +WILVRD+ K A+
Sbjct: 180 STDADRGLILIRGAVPGS-KGAWILVRDAAKVAL 212


>gi|298291438|ref|YP_003693377.1| 50S ribosomal protein L3 [Starkeya novella DSM 506]
 gi|296927949|gb|ADH88758.1| 50S ribosomal protein L3 [Starkeya novella DSM 506]
          Length = 251

 Score =  268 bits (686), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 129/211 (61%), Positives = 163/211 (77%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT ++N  G  +PVTVL +DNCQVV HRT++KNGY AVQ+G G+AK +N
Sbjct: 1   MRSGVIAQKVGMTRIFNDAGEHVPVTVLKVDNCQVVAHRTVEKNGYTAVQLGVGQAKPQN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            ++ +RG F+   V PK+K+ EFRV+ + DL+PVG+  +  +F VGQ VDVTG +IGKGF
Sbjct: 61  TTRALRGHFAVAKVEPKRKMAEFRVE-ESDLIPVGAELTVDHFVVGQFVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G   VT +NL+VV
Sbjct: 120 AGGMKRHNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGAETVTTQNLKVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGLI V+G VPG  K  WI+V D+ K
Sbjct: 180 LTDVERGLIAVEGAVPG-NKGGWIIVADAVK 209


>gi|260468554|ref|ZP_05813721.1| ribosomal protein L3 [Mesorhizobium opportunistum WSM2075]
 gi|259028710|gb|EEW30019.1| ribosomal protein L3 [Mesorhizobium opportunistum WSM2075]
          Length = 237

 Score =  268 bits (685), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 129/214 (60%), Positives = 163/214 (76%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT +YN  G  +PVTVL ++NCQVV  RT +KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAKKVGMTRIYNDAGEHVPVTVLQMENCQVVAQRTQEKNGYTAVQLGVGLAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK +RG F++ +V PK K+ EFRV  D+ ++ VG+  +  +F  GQ VDVTG TIGKGF
Sbjct: 61  TSKALRGHFATASVEPKAKVAEFRVSADN-MIDVGAEITVEHFVAGQKVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH+ GG RATHG S+SHR+HGSTG RQDPG+VFK K MAG MG  RVT +N+E+V
Sbjct: 120 QGVIKRHHMGGGRATHGNSVSHRTHGSTGQRQDPGKVFKGKHMAGHMGDTRVTTQNVEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           S D  RGLIL++G VPG+ K +WILVRD+ K A+
Sbjct: 180 STDADRGLILIRGAVPGS-KGAWILVRDAAKVAL 212


>gi|188581375|ref|YP_001924820.1| 50S ribosomal protein L3 [Methylobacterium populi BJ001]
 gi|226730534|sp|B1ZLK4|RL3_METPB RecName: Full=50S ribosomal protein L3
 gi|179344873|gb|ACB80285.1| ribosomal protein L3 [Methylobacterium populi BJ001]
          Length = 246

 Score =  268 bits (685), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 135/211 (63%), Positives = 159/211 (75%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+ARK+GMT V+   G  +PVTVL +D CQVV HRT +K+GY+A+QVG G+AKVKN
Sbjct: 1   MRSGVIARKVGMTRVFTDAGEHVPVTVLQIDQCQVVAHRTTEKDGYVALQVGVGKAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS+  RG F+   V PKKKL EFRV  +D L+PVG+  +  +F  GQ VDVTG T GKGF
Sbjct: 61  VSQAERGRFAVAKVEPKKKLAEFRVS-EDALIPVGAEITADHFIPGQFVDVTGTTTGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G  RVT +NL+VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLKVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGLILV+G VPG     WI VRDS K
Sbjct: 180 RTDPERGLILVEGAVPGV-AGGWIQVRDSVK 209


>gi|49475794|ref|YP_033835.1| 50S ribosomal protein L3 [Bartonella henselae str. Houston-1]
 gi|81827700|sp|Q6G2W5|RL3_BARHE RecName: Full=50S ribosomal protein L3
 gi|49238601|emb|CAF27842.1| 50S ribosomal protein l3 [Bartonella henselae str. Houston-1]
          Length = 246

 Score =  268 bits (685), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 133/211 (63%), Positives = 163/211 (77%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT +YN  G  +PVTVL L+NCQVV  RT++KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLENCQVVAQRTVEKNGYTAVQLGVGFAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ +RG F+  +V PK K+ EFRV  D+ LL +G+  +  +F  GQ VDVTG TIGKGF
Sbjct: 61  TSQALRGHFAKASVEPKAKIAEFRVSPDN-LLDIGTEITAEHFVPGQRVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HR+HGSTG  QDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNIEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           S D +RGLILV+G V G+ K +WILVRD+ K
Sbjct: 180 STDVERGLILVRGAVSGS-KGAWILVRDAIK 209


>gi|23014088|ref|ZP_00053925.1| COG0087: Ribosomal protein L3 [Magnetospirillum magnetotacticum
           MS-1]
 gi|83312229|ref|YP_422493.1| 50S ribosomal protein L3 [Magnetospirillum magneticum AMB-1]
 gi|109893435|sp|Q2W2J1|RL3_MAGMM RecName: Full=50S ribosomal protein L3
 gi|82947070|dbj|BAE51934.1| Ribosomal protein L3 [Magnetospirillum magneticum AMB-1]
          Length = 229

 Score =  268 bits (684), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 134/211 (63%), Positives = 163/211 (77%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  +G  +PVTVL +D CQVV  R+++K+GY+AVQ+GAG AKVKN
Sbjct: 1   MRSGLIAQKVGMTRIFTEDGTHVPVTVLKVDTCQVVSTRSVEKDGYVAVQLGAGTAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKP R  F+   V PKKKL EFRV  ++ LL VG+  S ++F  GQ VDVTG TIGKGF
Sbjct: 61  VSKPARANFAKAKVEPKKKLVEFRVAPEN-LLEVGTELSAAHFIPGQYVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NF GL ATHGVS+SHRSHGSTG RQDPG+VFK KKMAG MG  +VT +NL VV
Sbjct: 120 AGGMKRWNFRGLEATHGVSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDEQVTTQNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           S D  RGLILVKG VPG  + SW+LVRD+ K
Sbjct: 180 STDADRGLILVKGSVPG-HEGSWVLVRDAVK 209


>gi|49474404|ref|YP_032446.1| 50S ribosomal protein L3 [Bartonella quintana str. Toulouse]
 gi|81827601|sp|Q6FZC2|RL3_BARQU RecName: Full=50S ribosomal protein L3
 gi|49239908|emb|CAF26306.1| 50s ribosomal protein l3 [Bartonella quintana str. Toulouse]
          Length = 246

 Score =  267 bits (683), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 133/211 (63%), Positives = 164/211 (77%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT VYN  G  +PVTVL L+NCQV+  RT++KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRVYNDAGEHVPVTVLRLENCQVIAQRTIEKNGYTAVQLGVGFAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ +RG F+ V+V PK K+ EFRV  D+ LL +G+  +  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSRALRGHFAKVSVEPKAKIAEFRVSPDN-LLDIGTEITAQHFVPGQRVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HR+HGSTG  QDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNIEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           S D +RGLILV+G V G+ K +WILVRD+ K
Sbjct: 180 STDVERGLILVRGAVSGS-KGAWILVRDAVK 209


>gi|240850835|ref|YP_002972235.1| 50S ribosomal protein L3 [Bartonella grahamii as4aup]
 gi|240267958|gb|ACS51546.1| 50S ribosomal protein L3 [Bartonella grahamii as4aup]
          Length = 245

 Score =  267 bits (682), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 133/211 (63%), Positives = 163/211 (77%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT +YN  G  +PVTVL L+NCQVV  RT++KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLENCQVVAQRTVEKNGYTAVQLGVGFAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ +RG F+  +V PK K+ EFRV   D+LL VG+  +  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSQALRGHFAKASVEPKAKIAEFRVS-PDNLLDVGTEITVEHFVPGQRVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HR+HGSTG  QDPG+VFK KKMAG MG  RVT +N+EV+
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNIEVI 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           S D +RGLILV+G V G+ K SWILVRD+ K
Sbjct: 180 STDSERGLILVRGAVSGS-KGSWILVRDAVK 209


>gi|163851585|ref|YP_001639628.1| 50S ribosomal protein L3 [Methylobacterium extorquens PA1]
 gi|240138753|ref|YP_002963225.1| 50S ribosomal subunit protein L3 [Methylobacterium extorquens AM1]
 gi|254561353|ref|YP_003068448.1| 50S ribosomal subunit protein L3 [Methylobacterium extorquens DM4]
 gi|226730532|sp|A9W4Q1|RL3_METEP RecName: Full=50S ribosomal protein L3
 gi|163663190|gb|ABY30557.1| ribosomal protein L3 [Methylobacterium extorquens PA1]
 gi|240008722|gb|ACS39948.1| 50S ribosomal subunit protein L3 [Methylobacterium extorquens AM1]
 gi|254268631|emb|CAX24590.1| 50S ribosomal subunit protein L3 [Methylobacterium extorquens DM4]
          Length = 246

 Score =  267 bits (682), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 134/211 (63%), Positives = 159/211 (75%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+ARK+GMT V+   G  +PVTVL +D CQVV HRT +K+GY+A+QVG G+AKVKN
Sbjct: 1   MRSGVIARKVGMTRVFTDAGEHVPVTVLQIDQCQVVAHRTTEKDGYVALQVGVGKAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS+  RG F+   V PKKKL EFRV  +D L+PVG+  +  +F  GQ VDVTG + GKGF
Sbjct: 61  VSQAERGRFAVAKVEPKKKLAEFRVS-EDALIPVGAEITADHFIPGQFVDVTGTSTGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G  RVT +NL+VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLKVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGLILV+G VPG     WI VRDS K
Sbjct: 180 RTDPERGLILVEGAVPGV-AGGWIQVRDSVK 209


>gi|218530394|ref|YP_002421210.1| 50S ribosomal protein L3 [Methylobacterium chloromethanicum CM4]
 gi|254803680|sp|B7L0R1|RL3_METC4 RecName: Full=50S ribosomal protein L3
 gi|218522697|gb|ACK83282.1| ribosomal protein L3 [Methylobacterium chloromethanicum CM4]
          Length = 246

 Score =  266 bits (681), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 134/211 (63%), Positives = 159/211 (75%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+ARK+GMT V+   G  +PVTVL +D CQVV HRT +K+GY+A+QVG G+AKVKN
Sbjct: 1   MRSGVIARKVGMTRVFTDAGEHVPVTVLQIDQCQVVAHRTTEKDGYVALQVGVGKAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS+  RG F+   V PKKKL EFRV  +D L+PVG+  +  +F  GQ VDVTG + GKGF
Sbjct: 61  VSQAERGRFAVAKVEPKKKLAEFRVS-EDALIPVGAEITADHFIPGQFVDVTGTSTGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G  RVT +NL+VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLKVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGLILV+G VPG     WI VRDS K
Sbjct: 180 RTDPERGLILVEGAVPGV-AGGWIQVRDSVK 209


>gi|86135762|ref|ZP_01054341.1| 50S ribosomal protein L3 [Roseobacter sp. MED193]
 gi|85826636|gb|EAQ46832.1| 50S ribosomal protein L3 [Roseobacter sp. MED193]
          Length = 236

 Score =  266 bits (681), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 133/211 (63%), Positives = 160/211 (75%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  +G++IPVTVLHLD  QVV  RT DK+GY AVQ+GAG AK K 
Sbjct: 1   MRSGIIAKKVGMTRLFMEDGQQIPVTVLHLDGLQVVSQRTDDKDGYTAVQLGAGSAKAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F++  V PK+KL EFRV  D  L+ VG+  S  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSKAMRGHFAASKVEPKRKLVEFRVPADA-LIEVGAEISAEHFLEGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRWNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RGL+ +KG VPG  K+ W+ V+D+ K
Sbjct: 180 KTDADRGLVFIKGAVPGP-KSGWVTVKDAVK 209


>gi|84685437|ref|ZP_01013335.1| 50S ribosomal protein L3 [Maritimibacter alkaliphilus HTCC2654]
 gi|84666594|gb|EAQ13066.1| 50S ribosomal protein L3 [Rhodobacterales bacterium HTCC2654]
          Length = 290

 Score =  266 bits (681), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 127/211 (60%), Positives = 164/211 (77%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT ++  +G+++PVTVL LD  QVV  RT +K+GY AVQ+GAG AK K 
Sbjct: 2   MRSGVIAKKVGMTRLFLEDGKQVPVTVLQLDGLQVVAQRTTEKDGYTAVQLGAGSAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F++ NV+PK+K+ EFRV  ++ L+ VG   +  ++  GQ VDV+G +IGKGF
Sbjct: 62  TSKAMRGHFATANVAPKRKVAEFRVDAEN-LINVGEEITADHYFAGQFVDVSGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPGRVFK KKMAG MG  RVT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGRVFKGKKMAGHMGAARVTTQNLQVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGLI++KG VPG+ K  W+ ++D+ K
Sbjct: 181 KTDSERGLIMIKGAVPGS-KGGWVTIKDAVK 210


>gi|163868650|ref|YP_001609859.1| 50S ribosomal protein L3 [Bartonella tribocorum CIP 105476]
 gi|189042832|sp|A9IW27|RL3_BART1 RecName: Full=50S ribosomal protein L3
 gi|161018306|emb|CAK01864.1| 50S ribosomal protein L3 [Bartonella tribocorum CIP 105476]
          Length = 245

 Score =  266 bits (679), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 133/211 (63%), Positives = 163/211 (77%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT +YN  G  +PVTVL L+NCQVV  RT++KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLENCQVVAQRTVEKNGYTAVQLGVGFAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ +RG F+  +V PK K+ EFRV   D+LL +G+  +  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSQALRGHFAKASVEPKAKIAEFRVS-PDNLLDIGTEITVEHFVPGQRVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HR+HGSTG  QDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNIEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           S D +RGLILV+G V G+ K SWILVRD+ K
Sbjct: 180 STDIERGLILVRGAVSGS-KGSWILVRDAVK 209


>gi|294675856|ref|YP_003576471.1| 50S ribosomal protein L3 [Rhodobacter capsulatus SB 1003]
 gi|294474676|gb|ADE84064.1| 50S ribosomal protein L3 [Rhodobacter capsulatus SB 1003]
          Length = 238

 Score =  266 bits (679), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 128/214 (59%), Positives = 164/214 (76%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT ++  +G+++PVTVL LDN QVV  RT++ +GY AVQ+GAGEAK K 
Sbjct: 1   MRSGVIAKKLGMTRLFLEDGKQVPVTVLLLDNLQVVAQRTVETDGYTAVQLGAGEAKAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +  MRG F+  NV+PK+KL EFRV   ++L+ VG+  S  ++  GQ VD+ G +IGKGF
Sbjct: 61  TTAAMRGHFAKANVAPKRKLCEFRVS-PENLIDVGAEISAEHYLAGQHVDIAGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVS+SHRSHGSTG  QDPG+VFK KKMAG +G  RVT +NL+VV
Sbjct: 120 AGAMKRHNFGGLRASHGVSVSHRSHGSTGQCQDPGKVFKGKKMAGHLGAARVTTQNLQVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
             D  RGLI+VKG VPGA K  W+ ++D+ K A 
Sbjct: 180 RTDAARGLIMVKGSVPGA-KGGWVTIKDAVKKAA 212


>gi|212288260|sp|A8IAS6|RL3_AZOC5 RecName: Full=50S ribosomal protein L3
          Length = 241

 Score =  266 bits (679), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 133/211 (63%), Positives = 160/211 (75%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT ++   G  +PVTVL +++CQVV HRTLDKNGY+AVQ+GAG+ K KN
Sbjct: 1   MRSGVIAQKLGMTRIFTDAGEHLPVTVLKVESCQVVAHRTLDKNGYVAVQLGAGKRKPKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +K  RG F+   V PK+KL EFRV  D  L+PVG+  +  +F VGQ VDVTG TIGKGF
Sbjct: 61  TNKAERGQFARAEVEPKRKLAEFRVDADA-LIPVGAEITADHFVVGQYVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGGLRA+HGVSISHRS GSTG RQDPG+ FKNKKM G MG   VT +NL+VV
Sbjct: 120 AGGMKRHNFGGLRASHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGDVTVTTQNLKVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGLI V+G VPG     WI+VRD+ K
Sbjct: 180 MTDVERGLIAVEGAVPG-HAGGWIMVRDAVK 209


>gi|158424178|ref|YP_001525470.1| 50S ribosomal protein L3 [Azorhizobium caulinodans ORS 571]
 gi|158331067|dbj|BAF88552.1| ribosomal protein L3 [Azorhizobium caulinodans ORS 571]
          Length = 248

 Score =  266 bits (679), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 133/211 (63%), Positives = 160/211 (75%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT ++   G  +PVTVL +++CQVV HRTLDKNGY+AVQ+GAG+ K KN
Sbjct: 8   MRSGVIAQKLGMTRIFTDAGEHLPVTVLKVESCQVVAHRTLDKNGYVAVQLGAGKRKPKN 67

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +K  RG F+   V PK+KL EFRV  D  L+PVG+  +  +F VGQ VDVTG TIGKGF
Sbjct: 68  TNKAERGQFARAEVEPKRKLAEFRVDADA-LIPVGAEITADHFVVGQYVDVTGTTIGKGF 126

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGGLRA+HGVSISHRS GSTG RQDPG+ FKNKKM G MG   VT +NL+VV
Sbjct: 127 AGGMKRHNFGGLRASHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGDVTVTTQNLKVV 186

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGLI V+G VPG     WI+VRD+ K
Sbjct: 187 MTDVERGLIAVEGAVPG-HAGGWIMVRDAVK 216


>gi|163739437|ref|ZP_02146847.1| 50S ribosomal protein L3 [Phaeobacter gallaeciensis BS107]
 gi|163740231|ref|ZP_02147625.1| 50S ribosomal protein L3 [Phaeobacter gallaeciensis 2.10]
 gi|161386089|gb|EDQ10464.1| 50S ribosomal protein L3 [Phaeobacter gallaeciensis 2.10]
 gi|161387190|gb|EDQ11549.1| 50S ribosomal protein L3 [Phaeobacter gallaeciensis BS107]
          Length = 237

 Score =  266 bits (679), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 131/211 (62%), Positives = 161/211 (76%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  +G+++PVTVL LD  QV   RT +K+GY AVQ+GAG AKVK 
Sbjct: 1   MRSGIIAKKVGMTRLFLEDGKQVPVTVLQLDGLQVTAQRTEEKDGYTAVQLGAGSAKVKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK MRG F++  V PK+KL EFRV  D  L+ VG+  S  +F  GQ VDVTG +IGKGF
Sbjct: 61  VSKAMRGHFAAAKVEPKRKLVEFRVPADA-LIEVGAEISAEHFLEGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RGLI++KG VPG+ K  W+ V+D+ K
Sbjct: 180 KTDADRGLIMIKGAVPGS-KGGWVTVKDAVK 209


>gi|170738703|ref|YP_001767358.1| 50S ribosomal protein L3 [Methylobacterium sp. 4-46]
 gi|226730536|sp|B0UHW9|RL3_METS4 RecName: Full=50S ribosomal protein L3
 gi|168192977|gb|ACA14924.1| ribosomal protein L3 [Methylobacterium sp. 4-46]
          Length = 246

 Score =  265 bits (678), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 133/211 (63%), Positives = 159/211 (75%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  +PVTVL +D CQVV HRT++KNGY+A+QVG G+AKVKN
Sbjct: 1   MRSGVIAQKVGMTRVFTDAGEHVPVTVLKVDQCQVVAHRTVEKNGYVALQVGVGKAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK  RG F+   V PK+KL EFRV  +D L+PVG+  +  +F  GQ VDVTG T GKGF
Sbjct: 61  VSKAERGRFAIAKVEPKRKLAEFRVT-EDALIPVGAEITADHFIPGQFVDVTGTTTGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G  RVT +NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGLILV+G VPG     WI +RD+ K
Sbjct: 180 RTDPERGLILVEGAVPGV-AGGWIQIRDAVK 209


>gi|254461019|ref|ZP_05074435.1| ribosomal protein L3 [Rhodobacterales bacterium HTCC2083]
 gi|206677608|gb|EDZ42095.1| ribosomal protein L3 [Rhodobacteraceae bacterium HTCC2083]
          Length = 241

 Score =  265 bits (678), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 130/211 (61%), Positives = 161/211 (76%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  +G+ IPVTVL LD  QVV  RT DK+GY AVQ+GAG AK K 
Sbjct: 1   MRSGIIAKKVGMTRLFMEDGKAIPVTVLQLDALQVVAQRTSDKDGYTAVQLGAGTAKAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ MRG F++  V+PK+K+ EFRV  +D+L+ VG   S  ++  GQ VDV+G +IGKGF
Sbjct: 61  TSQAMRGHFAAAKVAPKRKVAEFRVS-EDNLINVGEEISAEHYLEGQKVDVSGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GAMKRHNFGGLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 120 QGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RGLI++KG VPG+ K  W+ V+D+ K
Sbjct: 180 KTDADRGLIMIKGAVPGS-KGGWVTVKDAVK 209


>gi|254474359|ref|ZP_05087745.1| ribosomal protein L3 [Ruegeria sp. R11]
 gi|214028602|gb|EEB69437.1| ribosomal protein L3 [Ruegeria sp. R11]
          Length = 239

 Score =  265 bits (678), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 131/211 (62%), Positives = 161/211 (76%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  +G+++PVTVL LD  QV   RT +K+GY AVQ+GAG AKVK 
Sbjct: 3   MRSGIIAKKVGMTRLFLEDGKQVPVTVLQLDGLQVTAQRTEEKDGYTAVQLGAGSAKVKR 62

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK MRG F++  V PK+KL EFRV  D  L+ VG+  S  +F  GQ VDVTG +IGKGF
Sbjct: 63  VSKAMRGHFAAAKVEPKRKLVEFRVPADG-LIEVGAEISAEHFLEGQKVDVTGTSIGKGF 121

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 122 AGAMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 181

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RGLI++KG VPG+ K  W+ V+D+ K
Sbjct: 182 KTDADRGLIMIKGAVPGS-KGGWVTVKDAVK 211


>gi|154253177|ref|YP_001414001.1| 50S ribosomal protein L3 [Parvibaculum lavamentivorans DS-1]
 gi|171769627|sp|A7HWR1|RL3_PARL1 RecName: Full=50S ribosomal protein L3
 gi|154157127|gb|ABS64344.1| ribosomal protein L3 [Parvibaculum lavamentivorans DS-1]
          Length = 251

 Score =  265 bits (678), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 132/212 (62%), Positives = 160/212 (75%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+ +K+GMT ++  +GR +PVTVL LDNCQVV  RT +KNGY AVQ+G G AK KN
Sbjct: 1   MRSGVIVKKVGMTRLFMEDGRHVPVTVLKLDNCQVVSQRTDEKNGYTAVQLGTGRAKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+   RG F+  +V PK +L EFRV  D+ LL VG   +  +F  GQ VDV+G +IGKGF
Sbjct: 61  VANAQRGQFARASVEPKLELVEFRVSPDN-LLDVGVEITADHFIAGQYVDVSGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGGLRATHGVS+SHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 120 AGVMKRHNFGGLRATHGVSVSHRSHGSTGQNQDPGKVFKGKKMAGHMGATRVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
             D  +GLI+VKG VPG+ K  W+LVRD+ K+
Sbjct: 180 RTDADKGLIMVKGAVPGS-KGGWVLVRDAVKT 210


>gi|83858566|ref|ZP_00952088.1| 50S ribosomal protein L3 [Oceanicaulis alexandrii HTCC2633]
 gi|83853389|gb|EAP91241.1| 50S ribosomal protein L3 [Oceanicaulis alexandrii HTCC2633]
          Length = 246

 Score =  265 bits (678), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 129/211 (61%), Positives = 164/211 (77%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+KLGMT V+  +G  +PVTVLHLD  QVV  RT + +GY AVQ+GAG+AK K 
Sbjct: 1   MRTGLLAKKLGMTRVFTEDGDHVPVTVLHLDGLQVVAQRTSENDGYTAVQLGAGKAKAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+  +V PK+KL EFRV  +D L+  G+  S  +F VGQ VDV+G +IGKGF
Sbjct: 61  TSKAMRGHFAKASVEPKRKLVEFRV-PEDALIEAGAELSAEHFVVGQKVDVSGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG +G  RVT+++LE+V
Sbjct: 120 AGGMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHLGSERVTIQSLEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +RGL+LVKG VPG+K+ SW+ +RD+ K
Sbjct: 180 RVDAERGLVLVKGAVPGSKE-SWVEIRDAVK 209


>gi|114570345|ref|YP_757025.1| 50S ribosomal protein L3P [Maricaulis maris MCS10]
 gi|122315784|sp|Q0ANQ0|RL3_MARMM RecName: Full=50S ribosomal protein L3
 gi|114340807|gb|ABI66087.1| LSU ribosomal protein L3P [Maricaulis maris MCS10]
          Length = 268

 Score =  265 bits (678), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 130/210 (61%), Positives = 162/210 (77%), Gaps = 2/210 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GVVARKLGMT ++  +G  +P TVLH+DN QVV H+T D++GY+A+Q+GAGEAK K  
Sbjct: 7   RTGVVARKLGMTRIFAEDGSHVPCTVLHMDNVQVVSHKTADRDGYVALQLGAGEAKAKRT 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            K MRG F+   V+PK+KL EFRV  +D L+ VGS  +  +F  GQ VDV G++IGKGF+
Sbjct: 67  PKAMRGHFAKAKVAPKRKLVEFRVA-EDALIEVGSELTADHFVPGQKVDVAGISIGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           GAMKRH FGGLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +N+EVV 
Sbjct: 126 GAMKRHGFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNIEVVR 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           VD +RG++LVKG VPG+    W+ +RD+ K
Sbjct: 186 VDVERGIVLVKGAVPGS-AGGWVELRDAIK 214


>gi|254512299|ref|ZP_05124366.1| ribosomal protein L3 [Rhodobacteraceae bacterium KLH11]
 gi|221536010|gb|EEE38998.1| ribosomal protein L3 [Rhodobacteraceae bacterium KLH11]
          Length = 241

 Score =  265 bits (678), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 130/211 (61%), Positives = 161/211 (76%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  +G++IPVTVLHLDN QVV  RT DK+GY AVQ+GAG AK K 
Sbjct: 1   MRSGIIAKKVGMTRLFMEDGKQIPVTVLHLDNLQVVAQRTADKDGYTAVQLGAGAAKAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG +++  V PK+KL EFRV  +D L+ VG+  S  +F  GQ VDV+G +IGKGF
Sbjct: 61  TSKAMRGHYAAAKVEPKRKLAEFRVS-EDGLIDVGAEISAEHFLEGQKVDVSGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  R L+ +KG VPG  K+ W+ V+D+ K
Sbjct: 180 KTDADRNLVFIKGAVPGP-KSGWVTVKDAVK 209


>gi|260425273|ref|ZP_05779253.1| 50S ribosomal protein L3 [Citreicella sp. SE45]
 gi|260423213|gb|EEX16463.1| 50S ribosomal protein L3 [Citreicella sp. SE45]
          Length = 280

 Score =  265 bits (677), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 128/211 (60%), Positives = 162/211 (76%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSGV+A+K+GMT ++  +G++IPVTVL LD CQVV  RT DK+GY AVQ+GAG  K KN
Sbjct: 2   LRSGVIAKKVGMTRLFMEDGKQIPVTVLQLDGCQVVAQRTADKDGYTAVQLGAGSIKAKN 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS PMRG F+   V PK+K+ EFRV  ++ L+ VG   +  ++  GQ VDV+G TIGKGF
Sbjct: 62  VSNPMRGHFAVAKVEPKRKIAEFRVDAEN-LIRVGEEITADHYFEGQFVDVSGTTIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RG+I++KG VPG+ K  W+ ++D+ K
Sbjct: 181 KTDADRGIIMIKGAVPGS-KGGWVTIKDAVK 210


>gi|162149174|ref|YP_001603635.1| 50S ribosomal protein L3 [Gluconacetobacter diazotrophicus PAl 5]
 gi|209545082|ref|YP_002277311.1| 50S ribosomal protein L3 [Gluconacetobacter diazotrophicus PAl 5]
 gi|189042847|sp|A9H3R5|RL3_GLUDA RecName: Full=50S ribosomal protein L3
 gi|161787751|emb|CAP57347.1| 50S ribosomal protein L3 [Gluconacetobacter diazotrophicus PAl 5]
 gi|209532759|gb|ACI52696.1| ribosomal protein L3 [Gluconacetobacter diazotrophicus PAl 5]
          Length = 227

 Score =  265 bits (677), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 132/218 (60%), Positives = 164/218 (75%), Gaps = 2/218 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+KLGMT ++  +G  +PVTVLH+DN QVV  RT D++GY AVQ+G G AKVKN
Sbjct: 1   MRTGLIAKKLGMTRLFKEDGTHVPVTVLHVDNLQVVDVRTQDRDGYTAVQLGFGNAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKP RG F+ V V PKKKL EFRV  DD +L  G+  S ++F VGQ VDVT  + GKGF
Sbjct: 61  VSKPNRGHFARVKVEPKKKLAEFRVA-DDAVLEAGATLSAAHFVVGQKVDVTSTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NF GL A+HGVSISHRSHGSTG RQDPG+ FKNKKMAG +G  RVT  NLEV 
Sbjct: 120 AGAMKRWNFAGLEASHGVSISHRSHGSTGNRQDPGKTFKNKKMAGHLGSERVTTLNLEVA 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           +VD ++ L++V+G VPG  KN  +LVRD+ K A + + 
Sbjct: 180 AVDAEKNLLMVRGSVPGG-KNELVLVRDAIKKARHAEA 216


>gi|259415840|ref|ZP_05739760.1| 50S ribosomal protein L3 [Silicibacter sp. TrichCH4B]
 gi|259347279|gb|EEW59056.1| 50S ribosomal protein L3 [Silicibacter sp. TrichCH4B]
          Length = 239

 Score =  264 bits (675), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 133/211 (63%), Positives = 161/211 (76%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  +G++IPVTVL LD  QVV  RT DK+GY AVQ+GAG AKVK 
Sbjct: 1   MRSGIIAKKVGMTRLFMEDGKQIPVTVLSLDGLQVVAQRTEDKDGYTAVQLGAGSAKVKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK MRG F++  V PK+KL EFRV  D  L+ VG+  S  +F  GQ VDVTG +IGKGF
Sbjct: 61  VSKAMRGHFAASKVEPKRKLVEFRVPADG-LIEVGAEISAEHFLTGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RGL+ +KG VPG  K+ W+ V+D+ K
Sbjct: 180 KTDADRGLVFIKGAVPGP-KSGWVTVKDAVK 209


>gi|209964040|ref|YP_002296955.1| ribosomal protein L3 [Rhodospirillum centenum SW]
 gi|226730556|sp|B6IRQ6|RL3_RHOCS RecName: Full=50S ribosomal protein L3
 gi|209957506|gb|ACI98142.1| ribosomal protein L3 [Rhodospirillum centenum SW]
          Length = 235

 Score =  264 bits (675), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 131/211 (62%), Positives = 161/211 (76%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+KLGMT V+  EG  +PVTVL LD  QVV  RT D++GY A+Q+GAG+AKVKN
Sbjct: 1   MRSGLIAQKLGMTRVFTDEGEHVPVTVLKLDQVQVVAQRTEDRDGYTALQLGAGKAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K  R  F+   V PKKKL EFRV  D  L+ VG+  +  +F  GQ VDVTG TIG+GF
Sbjct: 61  VAKAQREQFARAKVEPKKKLVEFRVTPDA-LIEVGAEITADHFVPGQFVDVTGTTIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G M+R NFGGLRATHGVS+SHRSHGSTG RQDPG+ FKNKKMAG  G  +VTV+NL+VV
Sbjct: 120 TGPMRRWNFGGLRATHGVSVSHRSHGSTGGRQDPGKTFKNKKMAGHYGVEKVTVQNLKVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +RGLILVKG +PG  +  W+L+RD+ K
Sbjct: 180 QVDVERGLILVKGAIPG-HEGGWVLIRDAVK 209


>gi|154245623|ref|YP_001416581.1| 50S ribosomal protein L3 [Xanthobacter autotrophicus Py2]
 gi|226730590|sp|A7IFY1|RL3_XANP2 RecName: Full=50S ribosomal protein L3
 gi|154159708|gb|ABS66924.1| ribosomal protein L3 [Xanthobacter autotrophicus Py2]
          Length = 241

 Score =  264 bits (674), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 132/211 (62%), Positives = 159/211 (75%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT ++   G  +PVTVL +++CQVV HRTLDKNGY+AVQ+GAG  K KN
Sbjct: 1   MRSGVIAQKVGMTRIFTDAGEHVPVTVLKVESCQVVAHRTLDKNGYVAVQLGAGRRKPKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++  RG F+   V PK KL EFRV  ++ L+PVG+  +  +F VGQ VDVTG TIGKGF
Sbjct: 61  VTRAERGHFAVAQVEPKHKLAEFRV-PEEALIPVGAEITADHFVVGQYVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G MG   VT +NL+VV
Sbjct: 120 AGGMKRHNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGDVTVTTQNLKVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGLI V+G VPG     WI VRD+ K
Sbjct: 180 MTDVERGLIAVEGAVPG-HAGGWITVRDAVK 209


>gi|307946286|ref|ZP_07661621.1| 50S ribosomal protein L3 [Roseibium sp. TrichSKD4]
 gi|307769950|gb|EFO29176.1| 50S ribosomal protein L3 [Roseibium sp. TrichSKD4]
          Length = 240

 Score =  264 bits (674), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 132/214 (61%), Positives = 161/214 (75%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT +YN  G  +PVTVL L+ CQVV HRT +KNGY A+QVG G AKV+N
Sbjct: 1   MRSGVIAQKVGMTRIYNDAGANVPVTVLRLEKCQVVAHRTEEKNGYTALQVGVGLAKVRN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
             K MRG ++   V PK+KL EFRV  D+ ++ VG+  +  ++  GQ VDVTG +IGKGF
Sbjct: 61  TPKAMRGHYAVAKVEPKRKLAEFRVSADN-MIDVGAEITADHYVEGQFVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SISHRSHGSTG  QDPGRVFK KKMAG MG  RVT +NL+VV
Sbjct: 120 AGVMKRHNFGGGRASHGNSISHRSHGSTGQCQDPGRVFKGKKMAGHMGDARVTTQNLKVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
             D +RGLI+V+G VPG  K  WILVRD+ K A+
Sbjct: 180 RTDVERGLIMVEGSVPGT-KGGWILVRDAIKKAL 212


>gi|319408765|emb|CBI82422.1| 50S ribosomal protein L3 [Bartonella schoenbuchensis R1]
          Length = 246

 Score =  264 bits (674), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 133/211 (63%), Positives = 162/211 (76%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT +YN  G  +PVTVL L+NCQV+  RT++KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRIYNEAGEHVPVTVLRLENCQVIAQRTVEKNGYTAVQLGVGFAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS+ +RG F+   V PK K+ EFRV   D+LL VG+  +  +F  GQ VDVTG +IGKGF
Sbjct: 61  VSRALRGHFAKAVVEPKAKVAEFRVS-PDNLLDVGTEITVEHFIPGQRVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HR+HGSTG  QDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNIEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           S D  RGLILV+G V G+ K +WILVRD+ K
Sbjct: 180 STDIDRGLILVRGAVSGS-KGAWILVRDAVK 209


>gi|99080087|ref|YP_612241.1| 50S ribosomal protein L3 [Ruegeria sp. TM1040]
 gi|123077810|sp|Q1GK37|RL3_SILST RecName: Full=50S ribosomal protein L3
 gi|99036367|gb|ABF62979.1| LSU ribosomal protein L3P [Ruegeria sp. TM1040]
          Length = 239

 Score =  264 bits (674), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 133/211 (63%), Positives = 161/211 (76%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  +G++IPVTVL LD  QVV  RT DK+GY AVQ+GAG AKVK 
Sbjct: 1   MRSGIIAKKVGMTRLFMEDGKQIPVTVLSLDGLQVVAQRTEDKDGYTAVQLGAGSAKVKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK MRG F++  V PK+KL EFRV  D  L+ VG+  S  +F  GQ VDVTG +IGKGF
Sbjct: 61  VSKAMRGHFAASKVEPKRKLVEFRVPADG-LIEVGAEISAEHFLEGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RGL+ +KG VPG  K+ W+ V+D+ K
Sbjct: 180 KTDADRGLVFIKGAVPGP-KSGWVTVKDAVK 209


>gi|254438817|ref|ZP_05052311.1| ribosomal protein L3 [Octadecabacter antarcticus 307]
 gi|198254263|gb|EDY78577.1| ribosomal protein L3 [Octadecabacter antarcticus 307]
          Length = 278

 Score =  263 bits (673), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 126/211 (59%), Positives = 161/211 (76%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSG++A+K+GMT ++  +GR+IPVTVL LD  QVV  RT +K+GY AVQ+GAG AK K 
Sbjct: 4   LRSGIIAKKVGMTRLFQEDGRQIPVTVLQLDKLQVVAQRTAEKDGYTAVQLGAGTAKAKR 63

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S PMRG F++  V PK+K+ EFRV  +++L+PVG     S++  GQ VDV+G +IGKGF
Sbjct: 64  TSAPMRGHFAAAKVEPKRKVCEFRVS-EENLIPVGEEIIASHYFEGQFVDVSGTSIGKGF 122

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNF GLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  ++T +NL V+
Sbjct: 123 AGAMKRHNFSGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAAKITTQNLVVI 182

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RGLI+VKG VPG+ K  W+ V+D+ K
Sbjct: 183 KTDPDRGLIMVKGAVPGS-KGGWVTVKDAVK 212


>gi|220921899|ref|YP_002497200.1| 50S ribosomal protein L3 [Methylobacterium nodulans ORS 2060]
 gi|254803681|sp|B8IS85|RL3_METNO RecName: Full=50S ribosomal protein L3
 gi|219946505|gb|ACL56897.1| ribosomal protein L3 [Methylobacterium nodulans ORS 2060]
          Length = 251

 Score =  263 bits (673), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 133/211 (63%), Positives = 160/211 (75%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  +PVTVL +D CQVV HRT++KNGY+A+QVG G+AKVKN
Sbjct: 1   MRSGVIAQKVGMTRVFTDAGEHVPVTVLKVDQCQVVAHRTVEKNGYVALQVGVGKAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK  RG F+   V PK+KL EFRV  +D L+PVG+  +  +F  GQ VDVTG+T GKGF
Sbjct: 61  VSKAERGRFAIAKVEPKRKLAEFRVS-EDALIPVGAEITADHFIPGQFVDVTGITTGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRA+HGVSISHRS GSTG RQDPG+ FKNKKM G +G  RVT +NL VV
Sbjct: 120 AGGMKRWNFGGLRASHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGLILV+G VPG     WI VRD+ K
Sbjct: 180 RTDPERGLILVEGAVPGV-AGGWIHVRDAVK 209


>gi|58038855|ref|YP_190819.1| 50S ribosomal protein L3 [Gluconobacter oxydans 621H]
 gi|81819160|sp|Q5FTY3|RL3_GLUOX RecName: Full=50S ribosomal protein L3
 gi|58001269|gb|AAW60163.1| LSU ribosomal protein L3P [Gluconobacter oxydans 621H]
          Length = 227

 Score =  263 bits (673), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 127/213 (59%), Positives = 162/213 (76%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+KLGMT ++  +G  +PVTVLHLDN +VV  RT +++GY A+Q+G G AKVKN
Sbjct: 1   MRTGLIAKKLGMTRLFKEDGTHVPVTVLHLDNVEVVDARTNERDGYTAIQLGLGNAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K  RG F+   V PK+ L EFRV  +D LL  G+  S ++F VGQ VDVTG + GKGF
Sbjct: 61  VTKANRGHFARTKVEPKRHLAEFRVS-EDALLEAGTKLSAAHFVVGQKVDVTGQSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG  RVT  NLE+ 
Sbjct: 120 AGVMKRHNFAGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGDERVTTLNLEIA 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           +VD++R LI+V+G +PGA KN  +L+RD+ K A
Sbjct: 180 AVDEERNLIMVRGAIPGA-KNGLVLIRDAIKKA 211


>gi|89070557|ref|ZP_01157846.1| 50S ribosomal protein L3 [Oceanicola granulosus HTCC2516]
 gi|89043864|gb|EAR50062.1| 50S ribosomal protein L3 [Oceanicola granulosus HTCC2516]
          Length = 292

 Score =  263 bits (673), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 127/211 (60%), Positives = 161/211 (76%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSG++A+K+GMT ++  +G++IPVTVL LD  QVV  RT++ +GY AVQ+GAG AK K 
Sbjct: 2   LRSGIIAKKVGMTRIFQEDGKQIPVTVLQLDKLQVVAKRTVETDGYSAVQLGAGIAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S PMRG F+  NV PK+K+ EFRV  ++ L+ VG   +  ++  GQ VDV+G +IGKGF
Sbjct: 62  TSAPMRGHFAKANVEPKRKIAEFRVAAEN-LIEVGEEITADHYFEGQYVDVSGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RGLI+VKG VPG+ K  W+ V+D+ K
Sbjct: 181 RTDADRGLIMVKGAVPGS-KGGWVTVKDAVK 210


>gi|103488295|ref|YP_617856.1| 50S ribosomal protein L3 [Sphingopyxis alaskensis RB2256]
 gi|123078063|sp|Q1GP99|RL3_SPHAL RecName: Full=50S ribosomal protein L3
 gi|98978372|gb|ABF54523.1| LSU ribosomal protein L3P [Sphingopyxis alaskensis RB2256]
          Length = 257

 Score =  263 bits (672), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 128/211 (60%), Positives = 159/211 (75%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR +PVTVL L+ CQVV  R  +++GY+AVQ+GAG AK KN
Sbjct: 1   MRTGVIAKKMGMTRLFQDDGRHVPVTVLSLEGCQVVSVRDKERDGYVAVQLGAGTAKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP RG +    V PK KL EFRV  DD  L VG+  S  +F  GQ+VD+ G+T GKGF
Sbjct: 61  VAKPQRGAYGKAEVEPKAKLVEFRV-ADDATLDVGAELSADHFVAGQMVDIQGVTQGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR  FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG    T +NLE+V
Sbjct: 120 AGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGARNRTQQNLEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGL+ VKG VPG+ K  W+LVRD+ K
Sbjct: 180 RTDAERGLLFVKGSVPGS-KGGWLLVRDAVK 209


>gi|310817008|ref|YP_003964972.1| 50S ribosomal protein L3 [Ketogulonicigenium vulgare Y25]
 gi|308755743|gb|ADO43672.1| 50S ribosomal protein L3 [Ketogulonicigenium vulgare Y25]
          Length = 237

 Score =  263 bits (672), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 121/211 (57%), Positives = 162/211 (76%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSG +A+K+GMT ++  +GR++PVTVL  +N QVV  RT++K+GY AVQ+GAG AK KN
Sbjct: 4   LRSGTIAKKIGMTRLFLEDGRQVPVTVLQFENLQVVAQRTVEKDGYTAVQLGAGTAKAKN 63

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++PMRG F++  V PK+KL EFRV   ++L+PVG+     ++  GQ VD++G +IGKGF
Sbjct: 64  VTQPMRGHFAAAKVEPKRKLAEFRV-TPENLIPVGAEIIADHYVAGQFVDISGTSIGKGF 122

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGGLRA+HGVS+SHRSHGS G  QDPGR+FK KKMAG MG  RVT +NL+V+
Sbjct: 123 AGVMKRHNFGGLRASHGVSVSHRSHGSVGQCQDPGRIFKGKKMAGHMGSARVTTQNLQVI 182

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RGL++VKG VPG  K  W+ ++D+ K
Sbjct: 183 RTDSTRGLVMVKGAVPG-NKGGWVTIKDAVK 212


>gi|319899099|ref|YP_004159192.1| 50S ribosomal protein L3 [Bartonella clarridgeiae 73]
 gi|319403063|emb|CBI76618.1| 50S ribosomal protein L3 [Bartonella clarridgeiae 73]
          Length = 246

 Score =  263 bits (672), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 133/211 (63%), Positives = 160/211 (75%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT +YN  G  +PVTVL LD CQVV  RT++KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLDKCQVVAQRTVEKNGYTAVQLGVGLAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ +RG F+   V PK K+ EFRV  D+ LL VG+  +  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSRALRGHFAKAAVEPKAKIAEFRVSPDN-LLDVGTEITVEHFVPGQRVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HR+HGSTG  QDPG+VFK KKMAG MG  RVT +N+EV+
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNVEVI 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           S D  RGLILV+G V G+ K SWILVRD+ K
Sbjct: 180 STDVDRGLILVRGSVSGS-KGSWILVRDAVK 209


>gi|319404425|emb|CBI78028.1| 50S ribosomal protein L3 [Bartonella rochalimae ATCC BAA-1498]
          Length = 254

 Score =  263 bits (672), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 133/211 (63%), Positives = 160/211 (75%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT +YN  G  +PVTVL LD CQV+  RT+ KNGY AVQ+G G AK+KN
Sbjct: 9   MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLDKCQVIAQRTVKKNGYTAVQLGVGFAKIKN 68

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK +RG F+   V PK K+ EFRV   D+LL VG+  +  +F  GQ VDVTG++IGKGF
Sbjct: 69  TSKALRGHFAKAVVEPKAKIAEFRVS-PDNLLDVGTEITVEHFVPGQRVDVTGVSIGKGF 127

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HR+HGSTG  QDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 128 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQARVTTQNIEVV 187

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           S D  RGLILV+G V G+ K SWILVRD+ K
Sbjct: 188 STDVDRGLILVRGSVSGS-KGSWILVRDAIK 217


>gi|319407426|emb|CBI81077.1| 50S ribosomal protein L3 [Bartonella sp. 1-1C]
          Length = 254

 Score =  263 bits (671), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 133/211 (63%), Positives = 161/211 (76%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT +YN  G  +PVTVL LD CQV+  RT++KNGY AVQ+G G AK+KN
Sbjct: 9   MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLDKCQVIAQRTVEKNGYTAVQLGVGFAKIKN 68

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK +RG F+   V PK K+ EFRV   D+LL VG+  +  +F  GQ VDVTG++IGKGF
Sbjct: 69  TSKALRGHFAKAVVEPKAKIAEFRVS-PDNLLDVGTEITVEHFVPGQRVDVTGVSIGKGF 127

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HR+HGSTG  QDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 128 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGRVRVTTQNIEVV 187

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           S D  RGLILV+G V G+ K SWILVRD+ K
Sbjct: 188 STDVDRGLILVRGSVSGS-KGSWILVRDAVK 217


>gi|170748636|ref|YP_001754896.1| 50S ribosomal protein L3 [Methylobacterium radiotolerans JCM 2831]
 gi|226730535|sp|B1LWS6|RL3_METRJ RecName: Full=50S ribosomal protein L3
 gi|170655158|gb|ACB24213.1| ribosomal protein L3 [Methylobacterium radiotolerans JCM 2831]
          Length = 241

 Score =  262 bits (670), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 132/211 (62%), Positives = 158/211 (74%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  +PVTVL +D CQVV HRT++KNGY+A+QVG G+AKVKN
Sbjct: 1   MRSGVIAQKVGMTRVFTDAGEHVPVTVLKIDQCQVVAHRTVEKNGYVALQVGVGKAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS   RG F+   V PKKKL EFRV  +D L+PVG+  +  +F  GQ VDVTG T GKGF
Sbjct: 61  VSAAERGRFAVAKVEPKKKLAEFRVT-EDALIPVGAEITADHFIPGQFVDVTGTTTGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G  RVT +NL VV
Sbjct: 120 AGGIKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGLILV+G VPG     WI +RD+ K
Sbjct: 180 RTDPERGLILVEGAVPGV-AGGWIQIRDAVK 209


>gi|126724861|ref|ZP_01740704.1| 50S ribosomal protein L3 [Rhodobacterales bacterium HTCC2150]
 gi|126706025|gb|EBA05115.1| 50S ribosomal protein L3 [Rhodobacterales bacterium HTCC2150]
          Length = 244

 Score =  262 bits (669), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 125/211 (59%), Positives = 163/211 (77%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT ++  +GR++PVTVL LDN QVV  RT +++GY AVQ+G G AK K 
Sbjct: 1   MRSGVIAKKVGMTRLFMEDGRQVPVTVLQLDNLQVVSQRTAERDGYTAVQLGTGLAKAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ MRG F++  V PK+K+ EFRV  ++ ++ VG   +  ++  GQ+VDV+G +IGKGF
Sbjct: 61  TSQAMRGHFAAAKVEPKRKVAEFRVAPEN-MINVGEEITADHYFEGQIVDVSGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NL+VV
Sbjct: 120 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           S D  RGLI++KG VPG+ K  W+ ++D+ K
Sbjct: 180 STDTDRGLIMIKGAVPGS-KGGWVTIKDAAK 209


>gi|163745537|ref|ZP_02152897.1| ribosomal protein L3 [Oceanibulbus indolifex HEL-45]
 gi|161382355|gb|EDQ06764.1| ribosomal protein L3 [Oceanibulbus indolifex HEL-45]
          Length = 292

 Score =  262 bits (669), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 128/211 (60%), Positives = 158/211 (74%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSGV+A+K+GMT ++  +G++IPVTVL LD  QVV  RT D++GY AVQ+GAG AK K 
Sbjct: 2   LRSGVIAKKVGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTADRDGYTAVQLGAGSAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ MRG F++  V PK+K+ EFRV  +  +L VG      ++  GQ VDV G +IGKGF
Sbjct: 62  TSQAMRGHFAAAKVEPKRKVAEFRVDAEA-MLEVGEEIIADHYFAGQYVDVAGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RGLI+VKG VPG+ K  W+ V+D+ K
Sbjct: 181 KTDSARGLIMVKGAVPGS-KGGWVTVKDAVK 210


>gi|146278568|ref|YP_001168727.1| 50S ribosomal protein L3 [Rhodobacter sphaeroides ATCC 17025]
 gi|145556809|gb|ABP71422.1| LSU ribosomal protein L3P [Rhodobacter sphaeroides ATCC 17025]
          Length = 239

 Score =  262 bits (669), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 128/214 (59%), Positives = 161/214 (75%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT ++  +G+++PVTVL LD+ QVV  RT +K+GY AVQ+GAG AK K 
Sbjct: 1   MRSGVIAKKLGMTRLFLEDGKQVPVTVLQLDSLQVVAQRTAEKDGYTAVQLGAGAAKAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S  MRG F+  NV PK+K+ EFRV  D  L+ VG+  +  ++  GQ VD+ G +IGKGF
Sbjct: 61  TSAGMRGHFAKANVEPKRKIAEFRVTPDC-LIDVGAEITADHYFAGQFVDIAGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NL+VV
Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
             D  RGLI+VKG VPG+ K  W+ ++D+ K  V
Sbjct: 180 RTDSDRGLIMVKGAVPGS-KGGWVTIKDAVKKPV 212


>gi|332187797|ref|ZP_08389531.1| 50S ribosomal protein L3 [Sphingomonas sp. S17]
 gi|332012147|gb|EGI54218.1| 50S ribosomal protein L3 [Sphingomonas sp. S17]
          Length = 244

 Score =  262 bits (669), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 130/211 (61%), Positives = 159/211 (75%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+KLGMT ++  +GR +PVTVL L+  QVV  R +D++GY AVQ+GAG AK KN
Sbjct: 1   MRTGVIAKKLGMTRLFQDDGRHVPVTVLALEGVQVVARREMDRDGYTAVQLGAGVAKTKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP RG F    V PK+ L EFRV  +D LL VG+  +  +F  GQ VD+ G T GKGF
Sbjct: 61  VAKPQRGHFGKAEVEPKQVLVEFRVN-EDGLLDVGAEIAADHFVPGQYVDIQGRTQGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGRVFKNKKMAG MG    T +NLE+V
Sbjct: 120 AGAMKRWNFGGLRATHGVSVSHRSHGSTGNRQDPGRVFKNKKMAGHMGDKNRTQQNLEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           S D +RGLI VKG VPG+ K  W++V+D+ K
Sbjct: 180 STDVERGLIFVKGSVPGS-KGGWLIVKDAVK 209


>gi|319405898|emb|CBI79530.1| 50S ribosomal protein L3 [Bartonella sp. AR 15-3]
          Length = 246

 Score =  261 bits (668), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 133/211 (63%), Positives = 161/211 (76%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT +YN  G  +PVTVL LD CQVV  RT++KNGY AVQ+G G AK+KN
Sbjct: 1   MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLDKCQVVAQRTVEKNGYTAVQLGVGLAKIKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ +RG F+   V PK K+ EFRV  D+ LL VG+  +  +F  GQ VDVTG++IGKGF
Sbjct: 61  TSQALRGHFAKAVVEPKAKIAEFRVSPDN-LLGVGTEITVEHFVPGQRVDVTGISIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HR+HGSTG  QDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGRVRVTTQNIEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           S D  RGLILV+G V G+ K SWILVRD+ K
Sbjct: 180 STDVDRGLILVRGSVSGS-KGSWILVRDAIK 209


>gi|254488658|ref|ZP_05101863.1| ribosomal protein L3 [Roseobacter sp. GAI101]
 gi|214045527|gb|EEB86165.1| ribosomal protein L3 [Roseobacter sp. GAI101]
          Length = 294

 Score =  261 bits (667), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 128/211 (60%), Positives = 159/211 (75%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSGV+A+K+GMT ++  +G++IPVTVL LD  QVV  RT +++GY AVQ+GAG AKVK 
Sbjct: 2   LRSGVIAKKMGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTTERDGYTAVQLGAGTAKVKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S PMRG F++  V PK+K+ EFRV  +  +L VG      ++  GQ VDV G +IGKGF
Sbjct: 62  TSAPMRGHFAAAKVEPKRKVAEFRVDPEA-MLNVGEEIIADHYFAGQYVDVAGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRATHGVS+SHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 121 AGAMKRHNFGGLRATHGVSVSHRSHGSTGQCQDPGKVFKGKKMAGHMGSARVTTQNLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RGLI+VKG VPG+ K  W+ V+D+ K
Sbjct: 181 KTDTVRGLIMVKGAVPGS-KGGWVTVKDAVK 210


>gi|77462259|ref|YP_351763.1| 50S ribosomal protein L3 [Rhodobacter sphaeroides 2.4.1]
 gi|126461135|ref|YP_001042249.1| 50S ribosomal protein L3 [Rhodobacter sphaeroides ATCC 17029]
 gi|221638113|ref|YP_002524375.1| 50S ribosomal protein L3 [Rhodobacter sphaeroides KD131]
 gi|109893550|sp|Q3J5S2|RL3_RHOS4 RecName: Full=50S ribosomal protein L3
 gi|77386677|gb|ABA77862.1| LSU ribosomal protein L3P [Rhodobacter sphaeroides 2.4.1]
 gi|126102799|gb|ABN75477.1| LSU ribosomal protein L3P [Rhodobacter sphaeroides ATCC 17029]
 gi|221158894|gb|ACL99873.1| 50S ribosomal protein L3 [Rhodobacter sphaeroides KD131]
          Length = 240

 Score =  261 bits (667), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 127/211 (60%), Positives = 160/211 (75%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT ++  +G+++PVTVL LD+ QVV  RT +K+GY AVQ+GAG AK K 
Sbjct: 1   MRSGVIAKKLGMTRLFLEDGKQVPVTVLQLDSLQVVAQRTTEKDGYTAVQLGAGAAKAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS   RG F+  NV PK+K+ EFRV  D  L+ VG+  +  ++  GQ VD+ G +IGKGF
Sbjct: 61  VSAAQRGHFAKANVEPKRKIAEFRVTPDC-LIDVGAEITADHYFAGQFVDIAGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NL+VV
Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RGLI+VKG VPG+ K  W+ ++D+ K
Sbjct: 180 RTDSDRGLIMVKGAVPGS-KGGWVTIKDAVK 209


>gi|304321440|ref|YP_003855083.1| 50S ribosomal protein L3 [Parvularcula bermudensis HTCC2503]
 gi|303300342|gb|ADM09941.1| 50S ribosomal protein L3 [Parvularcula bermudensis HTCC2503]
          Length = 309

 Score =  261 bits (667), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 131/217 (60%), Positives = 163/217 (75%), Gaps = 9/217 (4%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE------ 55
           R+GV+A+KLGMT VY  EG  +P TV+ L+NCQVV HRT +++GY A+Q+GAGE      
Sbjct: 24  RTGVIAKKLGMTRVYTAEGTHVPCTVVSLENCQVVSHRTEERDGYSALQLGAGEYLNRKG 83

Query: 56  -AKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGM 114
            AK+  VSK  RG F+  NV+PK+KL EFRV+ D  L+ +G+  +  ++  GQ VDV G 
Sbjct: 84  EAKLGRVSKAARGHFAKANVTPKRKLAEFRVETDY-LIEIGASLTAEHYVPGQRVDVVGT 142

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           +IGKGF+G MKRHNFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT 
Sbjct: 143 SIGKGFAGGMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGDVRVTT 202

Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +NLEV+  D  RGLIL+KG VPG+ K SWIL+RD+ K
Sbjct: 203 QNLEVIRTDVARGLILLKGAVPGS-KGSWILIRDAVK 238


>gi|312115687|ref|YP_004013283.1| 50S ribosomal protein L3 [Rhodomicrobium vannielii ATCC 17100]
 gi|311220816|gb|ADP72184.1| 50S ribosomal protein L3 [Rhodomicrobium vannielii ATCC 17100]
          Length = 236

 Score =  261 bits (666), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 125/211 (59%), Positives = 160/211 (75%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++   G  +PVTVL LD CQV+ HRT + NGY A+QVGAG  KVKN
Sbjct: 1   MRSGLLAQKVGMTRIFTEAGEHVPVTVLKLDQCQVIAHRTQEANGYTAIQVGAGSRKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++  RG F+   V PK K+ EFRV  ++ ++ VG+  +  +F  GQ VDV G +IGKGF
Sbjct: 61  VTRAERGHFAKAQVEPKAKVVEFRVTPEN-VIEVGAELTADHFLAGQFVDVIGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRATHGVSISHRSHGSTG RQDPG+ FK KKMAG MG +RVT +NL+VV
Sbjct: 120 AGAMKRWNFGGLRATHGVSISHRSHGSTGNRQDPGKTFKGKKMAGHMGVDRVTTQNLQVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGL+L++G VPGA K  W++V+D+ K
Sbjct: 180 RTDVERGLLLIRGAVPGA-KGGWVMVKDAVK 209


>gi|89053074|ref|YP_508525.1| 50S ribosomal protein L3 [Jannaschia sp. CCS1]
 gi|109893433|sp|Q28UW2|RL3_JANSC RecName: Full=50S ribosomal protein L3
 gi|88862623|gb|ABD53500.1| LSU ribosomal protein L3P [Jannaschia sp. CCS1]
          Length = 290

 Score =  261 bits (666), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 128/211 (60%), Positives = 158/211 (74%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSGV+A+K+GMT ++  +G++IPVTVL LD  QVV  +T D +GY AVQ+GAG AK K 
Sbjct: 2   LRSGVIAKKVGMTRLFMEDGKQIPVTVLQLDKLQVVAKKTSDSDGYSAVQLGAGTAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S PMRG F+  +V PK+KL EFRV  D+ L+ VG      ++  GQ VDVTG +IGKGF
Sbjct: 62  TSAPMRGVFAKASVEPKRKLVEFRVDADN-LIEVGEEIIADHYFEGQFVDVTGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPGRVFK KKMAG MG  RVT +NL++V
Sbjct: 121 QGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGRVFKGKKMAGHMGAARVTTQNLQIV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RGLI++KG VPG+ K  W+ V+D+ K
Sbjct: 181 RTDTDRGLIMIKGAVPGS-KGGWVTVKDAVK 210


>gi|121601833|ref|YP_988997.1| 50S ribosomal protein L3 [Bartonella bacilliformis KC583]
 gi|121602668|ref|YP_988967.1| 50S ribosomal protein L3 [Bartonella bacilliformis KC583]
 gi|212288247|sp|A1USL4|RL3_BARBK RecName: Full=50S ribosomal protein L3
 gi|120614010|gb|ABM44611.1| ribosomal protein L3 [Bartonella bacilliformis KC583]
 gi|120614845|gb|ABM45446.1| ribosomal protein L3 [Bartonella bacilliformis KC583]
          Length = 246

 Score =  261 bits (666), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 130/211 (61%), Positives = 160/211 (75%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+ +KLGMT +YN  G R+PVTVL L+NCQV+  RT++KNGY AVQ+G G AK + 
Sbjct: 1   MRSGVITQKLGMTSIYNDTGERVPVTVLRLENCQVIAQRTVEKNGYTAVQLGVGLAKFEK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK +RG FS   V PK K+ EFRV   D+LL VG+  +  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSKALRGHFSKALVEPKAKIVEFRVS-SDNLLDVGTEITVEHFVPGQRVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HR+HGSTG  QDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNVEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           S+D  RGLILV+G V G+ K +W+LVRD+ K
Sbjct: 180 SIDVDRGLILVRGAVSGS-KGAWVLVRDAVK 209


>gi|148260939|ref|YP_001235066.1| 50S ribosomal protein L3 [Acidiphilium cryptum JF-5]
 gi|212288245|sp|A5FZW5|RL3_ACICJ RecName: Full=50S ribosomal protein L3
 gi|146402620|gb|ABQ31147.1| LSU ribosomal protein L3P [Acidiphilium cryptum JF-5]
          Length = 227

 Score =  261 bits (666), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 124/213 (58%), Positives = 164/213 (76%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+KLGMT ++  +G  +PVTVLH+D+ +VV  RT +++GY AVQ+G G AK KN
Sbjct: 4   MRTGIIAKKLGMTRLFREDGTHVPVTVLHMDDVRVVAARTKERDGYAAVQLGFGHAKTKN 63

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+G F++  V P  +L EFRV  DD +L  G V S ++FTVGQ VDV G++ GKGF
Sbjct: 64  VTKPMKGHFAAAKVEPANRLVEFRVA-DDAVLEAGQVLSAAHFTVGQKVDVAGISKGKGF 122

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NF GL A+HGVSISHRS GSTG RQDPG+ FKNKKMAG +GG R+T  NLEV 
Sbjct: 123 AGGMKRWNFRGLEASHGVSISHRSLGSTGNRQDPGKTFKNKKMAGHLGGERITTLNLEVA 182

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           ++D+ R LI++KG VPGA K+ ++LVRD+ K+A
Sbjct: 183 AIDEARNLIMIKGAVPGA-KDGYVLVRDAVKTA 214


>gi|163733828|ref|ZP_02141270.1| ribosomal protein L3 [Roseobacter litoralis Och 149]
 gi|161392939|gb|EDQ17266.1| ribosomal protein L3 [Roseobacter litoralis Och 149]
          Length = 286

 Score =  260 bits (664), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 128/211 (60%), Positives = 161/211 (76%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSGV+A+K+GMT ++  +G++IPVTVL LD  QVV  RT DK+GY AVQ+GAG AK K 
Sbjct: 2   LRSGVIAKKVGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTSDKDGYSAVQLGAGTAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ MRG F++  V PK+K+ EFRV  ++ L+ VG   + +++  GQ VDV G +IGKGF
Sbjct: 62  TSQAMRGHFAAAKVEPKRKVAEFRVDAEN-LIGVGEEITANHYFEGQFVDVAGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RGLI+VKG VPG+ K  W+ V+D+ K
Sbjct: 181 RTDADRGLIMVKGAVPGS-KGGWVTVKDAVK 210


>gi|94498476|ref|ZP_01305032.1| ribosomal protein L3 [Sphingomonas sp. SKA58]
 gi|94422019|gb|EAT07064.1| ribosomal protein L3 [Sphingomonas sp. SKA58]
          Length = 252

 Score =  260 bits (664), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 128/211 (60%), Positives = 160/211 (75%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR +PVTVL L+  QVV  +  D++GY+AVQ+GAG AKVKN
Sbjct: 2   MRTGVIAKKVGMTRLFQEDGRHVPVTVLALEGNQVVARKETDRDGYIAVQLGAGVAKVKN 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP RG F+   V PK +L EFRV  +D LL VG+  +  +F  GQLVDV G T GKGF
Sbjct: 62  VAKPQRGQFAKAEVEPKARLVEFRV-AEDALLDVGAEIAADHFVAGQLVDVAGHTQGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR  FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG    T +NLE+V
Sbjct: 121 AGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRERTQQNLEIV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGL+ VKG VPGA K +W+ V+D+ K
Sbjct: 181 RTDVERGLLFVKGSVPGA-KGTWLTVKDAVK 210


>gi|84503642|ref|ZP_01001680.1| 50S ribosomal protein L3 [Oceanicola batsensis HTCC2597]
 gi|84387939|gb|EAQ00991.1| 50S ribosomal protein L3 [Oceanicola batsensis HTCC2597]
          Length = 290

 Score =  260 bits (664), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 125/211 (59%), Positives = 161/211 (76%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSG++A+K+GMT ++  +G+++PVTVL LD  QVV  RT + +GY AVQ+GAG AK K 
Sbjct: 2   LRSGIIAKKIGMTRLFMEDGKQVPVTVLQLDKLQVVAQRTAEAHGYTAVQLGAGTAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F++ +V PK+K+ EFRV  D+ L+ VG   +  ++  GQ VDV G +IGKGF
Sbjct: 62  TSKAMRGHFAAASVEPKRKIAEFRVDPDN-LIKVGEEITADHYFEGQFVDVCGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGLI++KG VPG+ K  W+ V+D+ K
Sbjct: 181 KTDSERGLIMIKGAVPGS-KGGWVTVKDAVK 210


>gi|163796919|ref|ZP_02190876.1| Ribosomal protein L3 [alpha proteobacterium BAL199]
 gi|159177908|gb|EDP62457.1| Ribosomal protein L3 [alpha proteobacterium BAL199]
          Length = 249

 Score =  259 bits (663), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 130/212 (61%), Positives = 160/212 (75%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT V+  EG  +PVTVL +D CQVV  RT DK+GY AVQ+G G  K K+
Sbjct: 1   MRSGMIAQKVGMTRVFTDEGTHVPVTVLKVDGCQVVSVRTQDKDGYTAVQLGVGVRKPKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KPMRG F+   V PK+KL EFRV  +D LL VG+  S  +F  GQ VDVTG +IGKGF
Sbjct: 61  TTKPMRGHFAKAGVEPKRKLVEFRVT-EDALLDVGAELSVEHFVAGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNF GLRA+HGVS+SHRSHGSTG  QDPGRV+K KKMAG MG  RVT +NL +V
Sbjct: 120 AGAMKRHNFSGLRASHGVSLSHRSHGSTGNNQDPGRVWKGKKMAGHMGDVRVTTQNLVIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           S D +RGLILV+G VPG+    W+L+ D+ K+
Sbjct: 180 STDAERGLILVRGAVPGS-DGGWVLLSDAVKA 210


>gi|255263954|ref|ZP_05343296.1| 50S ribosomal protein L3 [Thalassiobium sp. R2A62]
 gi|255106289|gb|EET48963.1| 50S ribosomal protein L3 [Thalassiobium sp. R2A62]
          Length = 292

 Score =  259 bits (663), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 125/214 (58%), Positives = 163/214 (76%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSG++A+K+GMT ++  +G++IPVTVL LD  QVV  RT + +GY AVQ+GAG AKVK 
Sbjct: 2   LRSGIIAKKVGMTRIFQEDGKQIPVTVLQLDKLQVVAQRTQETDGYTAVQLGAGTAKVKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS+ MRG F++  V PK+++ EFRV  ++ L+ VG   + +++  GQ VDV+G +IGKGF
Sbjct: 62  VSQAMRGHFAAAKVEPKRRVAEFRVAAEN-LINVGEEITANHYFEGQFVDVSGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GAMKRHNFGGLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  +VT +NL+VV
Sbjct: 121 QGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAAKVTTQNLQVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
             D  RGLI+VKG VPG+ K  W+ V+D+ K  +
Sbjct: 181 KTDAGRGLIMVKGAVPGS-KGGWVTVKDAVKKPI 213


>gi|330993846|ref|ZP_08317778.1| 50S ribosomal protein L3 [Gluconacetobacter sp. SXCC-1]
 gi|329759114|gb|EGG75626.1| 50S ribosomal protein L3 [Gluconacetobacter sp. SXCC-1]
          Length = 223

 Score =  259 bits (663), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 128/214 (59%), Positives = 162/214 (75%), Gaps = 2/214 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++A+KLGMT ++  +G  +PVTVL +D+ QVV  RT +++GY AVQ+GAG+AKVKNVSKP
Sbjct: 1   MIAKKLGMTRLFKEDGTHVPVTVLQVDDLQVVDVRTTERDGYTAVQLGAGKAKVKNVSKP 60

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
            RG F+   V PKKKL EFRV  DD +L VG+  S ++F  GQ VDVTG + GKGF+GAM
Sbjct: 61  NRGHFAKAKVEPKKKLAEFRVA-DDSVLEVGASLSAAHFVAGQKVDVTGTSKGKGFAGAM 119

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR NF GL ATHGVSISHRSHGSTG RQDPG+VFKNKKMAG +G  RVT  NLE+ +VD 
Sbjct: 120 KRWNFAGLEATHGVSISHRSHGSTGNRQDPGKVFKNKKMAGHLGSERVTTLNLEIAAVDA 179

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           ++ LI+++G VPG  KN  +LVRD+ K A + + 
Sbjct: 180 EKNLIMIRGSVPGG-KNETVLVRDAIKKARHAEA 212


>gi|83854978|ref|ZP_00948508.1| 50S ribosomal protein L3 [Sulfitobacter sp. NAS-14.1]
 gi|83842821|gb|EAP81988.1| 50S ribosomal protein L3 [Sulfitobacter sp. NAS-14.1]
          Length = 280

 Score =  259 bits (663), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 128/211 (60%), Positives = 158/211 (74%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSGV+A+K+GMT ++  +G++IPVTVL LD  QVV  RT +K+GY AVQ+GAG AK K 
Sbjct: 2   LRSGVIAKKMGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTPEKDGYTAVQLGAGTAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ MRG F++  V PK+K+ EFRV  +  +L VG      ++  GQ VDV G +IGKGF
Sbjct: 62  TSQAMRGHFAAAKVEPKRKVAEFRVDPEA-MLNVGEEIIADHYFAGQYVDVAGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RGLI+VKG VPG+ K  W+ V+D+ K
Sbjct: 181 KTDSARGLIMVKGAVPGS-KGGWVTVKDAVK 210


>gi|83941500|ref|ZP_00953962.1| 50S ribosomal protein L3 [Sulfitobacter sp. EE-36]
 gi|83847320|gb|EAP85195.1| 50S ribosomal protein L3 [Sulfitobacter sp. EE-36]
          Length = 280

 Score =  259 bits (663), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 128/211 (60%), Positives = 158/211 (74%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSGV+A+K+GMT ++  +G++IPVTVL LD  QVV  RT +K+GY AVQ+GAG AK K 
Sbjct: 2   LRSGVIAKKMGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTPEKDGYTAVQLGAGTAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ MRG F++  V PK+K+ EFRV  +  +L VG      ++  GQ VDV G +IGKGF
Sbjct: 62  TSQAMRGHFAAAKVEPKRKVAEFRVDPEA-MLNVGEEIIADHYFAGQYVDVAGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RGLI+VKG VPG+ K  W+ V+D+ K
Sbjct: 181 KTDSARGLIMVKGAVPGS-KGGWVTVKDAVK 210


>gi|159042832|ref|YP_001531626.1| 50S ribosomal protein L3 [Dinoroseobacter shibae DFL 12]
 gi|226725165|sp|A8LM48|RL3_DINSH RecName: Full=50S ribosomal protein L3
 gi|157910592|gb|ABV92025.1| 50S ribosomal protein L3 [Dinoroseobacter shibae DFL 12]
          Length = 279

 Score =  259 bits (663), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 125/214 (58%), Positives = 163/214 (76%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT ++  +G+++PVTVL LD  QVV  RT +K+GY AVQ+GAG AK K 
Sbjct: 1   MRSGVIAKKVGMTRLFMEDGKQVPVTVLQLDKLQVVAQRTAEKDGYSAVQLGAGTAKAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +K MRG F++ +V PK+K+ EFRV   ++L+ VG   +  ++  GQ VDV+G +IGKGF
Sbjct: 61  TTKAMRGHFAAASVEPKRKVAEFRVA-PENLINVGEEITADHYFEGQYVDVSGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NL+VV
Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
             D  RGLI++KG VPG+ K  W+ ++D+ K  V
Sbjct: 180 RTDADRGLIMIKGAVPGS-KGGWVTIKDAVKKPV 212


>gi|326404337|ref|YP_004284419.1| 50S ribosomal protein L3 [Acidiphilium multivorum AIU301]
 gi|325051199|dbj|BAJ81537.1| 50S ribosomal protein L3 [Acidiphilium multivorum AIU301]
          Length = 225

 Score =  259 bits (662), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 123/213 (57%), Positives = 164/213 (76%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+KLGMT ++  +G  +PVTVLH+D+ +VV  RT +++GY AVQ+G G AK KN
Sbjct: 2   MRTGIIAKKLGMTRLFREDGTHVPVTVLHMDDVRVVAARTKERDGYAAVQLGFGHAKTKN 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+G F++  V P  +L EFRV  DD +L  G V S ++FTVGQ VDV G++ GKGF
Sbjct: 62  VTKPMKGHFAAAKVEPANRLVEFRVA-DDAVLEAGQVLSAAHFTVGQKVDVAGISKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NF GL A+HGVSISHRS GSTG RQDPG+ F+NKKMAG +GG R+T  NLEV 
Sbjct: 121 AGGMKRWNFRGLEASHGVSISHRSLGSTGNRQDPGKTFRNKKMAGHLGGERITTLNLEVA 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           ++D+ R LI++KG VPGA K+ ++LVRD+ K+A
Sbjct: 181 AIDEARNLIMIKGAVPGA-KDGYVLVRDAVKTA 212


>gi|307294974|ref|ZP_07574816.1| 50S ribosomal protein L3 [Sphingobium chlorophenolicum L-1]
 gi|306879448|gb|EFN10666.1| 50S ribosomal protein L3 [Sphingobium chlorophenolicum L-1]
          Length = 251

 Score =  259 bits (661), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 128/211 (60%), Positives = 160/211 (75%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR IPVTVL L+  QVV  + ++++GY+AVQ+GAG AKVKN
Sbjct: 1   MRTGVIAKKVGMTRLFQEDGRHIPVTVLALEGNQVVARKEVERDGYVAVQLGAGVAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP RG F+   V PK +L EFRV  +D LL VG+  +  +F  GQLVDV G T GKGF
Sbjct: 61  VAKPQRGHFAKAEVEPKARLVEFRV-AEDALLDVGAEIAADHFIAGQLVDVAGHTQGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR  FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG    T +NLE+V
Sbjct: 120 AGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRERTQQNLEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGL+ VKG VPGA K +W+ V D+ K
Sbjct: 180 RTDVERGLLFVKGSVPGA-KGTWLTVSDAVK 209


>gi|328543358|ref|YP_004303467.1| 50S ribosomal protein L3 [Polymorphum gilvum SL003B-26A1]
 gi|326413103|gb|ADZ70166.1| 50S ribosomal protein L3 [Polymorphum gilvum SL003B-26A1]
          Length = 227

 Score =  259 bits (661), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 127/205 (61%), Positives = 155/205 (75%), Gaps = 2/205 (0%)

Query: 10  LGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFF 69
           +GMT +YN  G  +PVTVL L+ CQVV HRT +KNGY A+Q+GAG AKVKN  K MRG F
Sbjct: 1   MGMTRIYNDAGEHVPVTVLRLEKCQVVAHRTEEKNGYTALQLGAGAAKVKNTPKAMRGHF 60

Query: 70  SSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129
           +   V PK+ + EFRV +D+ L+ VG+  +  ++  GQ VDVTG +IGKGF+G MKRHNF
Sbjct: 61  AVAKVEPKRTIAEFRVSQDN-LIDVGAEITADHYVAGQYVDVTGTSIGKGFAGVMKRHNF 119

Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLI 189
           GG RATHG S+SHRSHGSTG RQDPG+VFK KKMAG MG  RVT +NL+VV  D +RGLI
Sbjct: 120 GGGRATHGNSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDVRVTTQNLKVVRTDVERGLI 179

Query: 190 LVKGCVPGAKKNSWILVRDSFKSAV 214
           +V+G VPGA K  WILVRD+ K A+
Sbjct: 180 MVEGSVPGA-KGGWILVRDAVKKAL 203


>gi|260577181|ref|ZP_05845158.1| ribosomal protein L3 [Rhodobacter sp. SW2]
 gi|259020655|gb|EEW23974.1| ribosomal protein L3 [Rhodobacter sp. SW2]
          Length = 241

 Score =  258 bits (660), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 123/214 (57%), Positives = 161/214 (75%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT ++  +G+++PVTVL LD  QVV  RT +++GY AVQ+GAG AK K 
Sbjct: 1   MRSGVIAKKLGMTRLFLEDGKQVPVTVLQLDALQVVAQRTAERDGYTAVQLGAGAAKAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +  MRG F++ NV+PK+K+ EFRV  D+ L+ VG+  +  ++  GQ VD+ G +IGKGF
Sbjct: 61  TTAGMRGHFAAANVAPKRKIAEFRVSPDN-LIDVGAEITADHYLAGQFVDIAGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GAMKRHNFGGLRA+HGVS+SHRSHGSTG  QDPG+VFK KKMAG MG  R T +NL+VV
Sbjct: 120 QGAMKRHNFGGLRASHGVSVSHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRCTTQNLQVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
             D  RGLI++KG VPG+ K  W+ ++D+ K A 
Sbjct: 180 RTDADRGLIMIKGAVPGS-KGGWVTIKDAVKKAA 212


>gi|119383511|ref|YP_914567.1| 50S ribosomal protein L3 [Paracoccus denitrificans PD1222]
 gi|166233172|sp|A1B027|RL3_PARDP RecName: Full=50S ribosomal protein L3
 gi|119373278|gb|ABL68871.1| LSU ribosomal protein L3P [Paracoccus denitrificans PD1222]
          Length = 245

 Score =  258 bits (660), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 121/211 (57%), Positives = 164/211 (77%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+GV+A+KLGMT ++  +GR++PVTVLH+DN QV+  RT +++GY+A+Q+GAGEAK K 
Sbjct: 2   LRTGVIAKKLGMTRLFLEDGRQVPVTVLHVDNVQVIAQRTAEQDGYVALQLGAGEAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +  +RG F+  NV+PK+K+ EFRV   ++L+ VG      ++  GQ VD+ G +IGKGF
Sbjct: 62  TTAALRGHFAKANVAPKRKIAEFRVS-PENLVEVGEEIVADHYFEGQYVDIAGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG +G  RVT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHLGAVRVTTQNLQVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGLI+VKG VPG+ K  W+ ++D+ K
Sbjct: 181 KTDAERGLIMVKGSVPGS-KGGWVTIKDAVK 210


>gi|260752974|ref|YP_003225867.1| 50S ribosomal protein L3 [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258552337|gb|ACV75283.1| ribosomal protein L3 [Zymomonas mobilis subsp. mobilis NCIMB 11163]
          Length = 242

 Score =  258 bits (659), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 126/213 (59%), Positives = 163/213 (76%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR +PVTVL L++ QVV  +  D++GY+AVQ+GAG AK KN
Sbjct: 1   MRTGVIAKKVGMTRLFQEDGRHVPVTVLKLEDVQVVAVKNKDQDGYVAVQLGAGSAKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP+RG F+   V  K KL EF V  +D +L VG+  S  +F  GQLVD++G T GKGF
Sbjct: 61  VTKPVRGHFAKAEVELKAKLVEFPVS-EDAVLEVGTSISADHFIAGQLVDISGQTQGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR  FGGLRATHGVS+SHRSHGSTG RQDPGRVFKNKKMAG MG  + T +NLEV+
Sbjct: 120 AGAMKRWGFGGLRATHGVSLSHRSHGSTGNRQDPGRVFKNKKMAGHMGARQRTQQNLEVI 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           S D +R LI V+G VPG+ K +W+++RD+ K A
Sbjct: 180 STDAERDLIFVRGSVPGS-KGAWLIIRDAVKVA 211


>gi|56551413|ref|YP_162252.1| 50S ribosomal protein L3 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241761060|ref|ZP_04759149.1| ribosomal protein L3 [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|81820917|sp|Q5NQ64|RL3_ZYMMO RecName: Full=50S ribosomal protein L3
 gi|56542987|gb|AAV89141.1| ribosomal protein L3 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241374679|gb|EER64140.1| ribosomal protein L3 [Zymomonas mobilis subsp. mobilis ATCC 10988]
          Length = 242

 Score =  258 bits (658), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 126/213 (59%), Positives = 163/213 (76%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR +PVTVL L++ QVV  +  D++GY+AVQ+GAG AK KN
Sbjct: 1   MRTGVIAKKVGMTRLFQEDGRHVPVTVLKLEDVQVVAVKNKDQDGYVAVQLGAGSAKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP+RG F+   V  K KL EF V  +D +L VG+  S  +F  GQLVD++G T GKGF
Sbjct: 61  VTKPVRGHFAKAEVELKAKLVEFPVS-EDAVLEVGTSISADHFIAGQLVDISGQTQGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR  FGGLRATHGVS+SHRSHGSTG RQDPGRVFKNKKMAG MG  + T +NLEV+
Sbjct: 120 AGAMKRWGFGGLRATHGVSLSHRSHGSTGNRQDPGRVFKNKKMAGHMGARQRTQQNLEVI 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           S D +R LI V+G VPG+ K +W+++RD+ K A
Sbjct: 180 STDAERDLIFVRGSVPGS-KGAWLIIRDAVKVA 211


>gi|144900884|emb|CAM77748.1| 50S ribosomal protein L3 [Magnetospirillum gryphiswaldense MSR-1]
          Length = 230

 Score =  258 bits (658), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 128/211 (60%), Positives = 163/211 (77%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  +G  +PVTVL +D  QVV  R+++K+GY AVQ+GAG AKVKN
Sbjct: 1   MRSGLIAQKVGMTRIFTEDGTHVPVTVLKVDTVQVVSTRSVEKDGYTAVQLGAGTAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K  R  F++  V PKKKL EFRV   +++L VG   S ++F  GQ VD+TG TIGKGF
Sbjct: 61  VAKAQRTTFANAKVEPKKKLVEFRVA-PENVLEVGVELSAAHFIPGQFVDITGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NF GL ATHGVS+SHRSHGSTG RQDPG+VFK KKMAG MG  +VT +NL+VV
Sbjct: 120 AGGMKRWNFRGLEATHGVSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDEQVTTQNLKVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           S D +RGLILVKG VPG+ + SW+LV+D+ K
Sbjct: 180 STDVERGLILVKGSVPGS-EGSWVLVKDAVK 209


>gi|254470259|ref|ZP_05083663.1| ribosomal protein L3 [Pseudovibrio sp. JE062]
 gi|211960570|gb|EEA95766.1| ribosomal protein L3 [Pseudovibrio sp. JE062]
          Length = 227

 Score =  258 bits (658), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 124/203 (61%), Positives = 156/203 (76%), Gaps = 2/203 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT +YN  G  +PVTVL LDNCQVV HRT +KNGY A+Q+G G AKVKN ++ MRG F+ 
Sbjct: 1   MTRIYNEAGEHVPVTVLRLDNCQVVAHRTAEKNGYTALQLGVGAAKVKNTNRAMRGHFAV 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             V PK+KL EFRV  +++++ VG+  +  +F  GQ VDVTG +IGKGF+GAMKRHNFGG
Sbjct: 61  AKVEPKRKLAEFRVS-EENMIEVGAELTADHFLNGQFVDVTGTSIGKGFAGAMKRHNFGG 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
            RA+HGVSISHR+HGSTG  QDPG+VFK KKMAG +G  RVT +NL+VV  D +RGLI+V
Sbjct: 120 GRASHGVSISHRAHGSTGQCQDPGKVFKGKKMAGHLGAERVTTQNLKVVRTDVERGLIMV 179

Query: 192 KGCVPGAKKNSWILVRDSFKSAV 214
           +G VPG+ K  WILVRD+ K ++
Sbjct: 180 EGSVPGS-KGGWILVRDAIKKSL 201


>gi|110678718|ref|YP_681725.1| ribosomal protein L3 [Roseobacter denitrificans OCh 114]
 gi|123362126|sp|Q16AF4|RL3_ROSDO RecName: Full=50S ribosomal protein L3
 gi|109454834|gb|ABG31039.1| ribosomal protein L3 [Roseobacter denitrificans OCh 114]
          Length = 286

 Score =  257 bits (656), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 126/211 (59%), Positives = 161/211 (76%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSGV+A+K+GMT ++  +G++IPVTVL LD  QVV  RT +K+GY AVQ+GAG AK K 
Sbjct: 2   LRSGVIAKKVGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTSEKDGYSAVQLGAGTAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ MRG F++  V PK+K+ EFRV   ++L+ VG   + +++  GQ VDV G +IGKGF
Sbjct: 62  TSQAMRGHFAAAKVEPKRKVAEFRVD-PENLIGVGEEITANHYFEGQFVDVAGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RGLI+VKG VPG+ K  W+ V+D+ K
Sbjct: 181 RTDANRGLIMVKGAVPGS-KGGWVTVKDAVK 210


>gi|294010613|ref|YP_003544073.1| ribosomal protein L3 [Sphingobium japonicum UT26S]
 gi|292673943|dbj|BAI95461.1| ribosomal protein L3 [Sphingobium japonicum UT26S]
          Length = 251

 Score =  256 bits (655), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 128/211 (60%), Positives = 160/211 (75%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR IPVTVL L+  QVV  + ++++GY+AVQ+GAG AKVKN
Sbjct: 1   MRTGVIAKKVGMTRLFQEDGRHIPVTVLALEGNQVVARKEVERDGYVAVQLGAGVAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP RG F+   V PK +L EFRV  +D LL VG+  +  +F  GQLVDV G T GKGF
Sbjct: 61  VAKPQRGHFAKAEVEPKARLVEFRV-AEDALLDVGAEIAADHFIAGQLVDVAGHTQGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR  FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG    T +NLE+V
Sbjct: 120 AGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRERTQQNLEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGL+ VKG VPGA K +W+ V D+ K
Sbjct: 180 RTDVERGLLFVKGSVPGA-KGTWLTVCDAVK 209


>gi|83594020|ref|YP_427772.1| 50S ribosomal protein L3 [Rhodospirillum rubrum ATCC 11170]
 gi|109893549|sp|Q2RQW0|RL3_RHORT RecName: Full=50S ribosomal protein L3
 gi|83576934|gb|ABC23485.1| LSU ribosomal protein L3P [Rhodospirillum rubrum ATCC 11170]
          Length = 235

 Score =  256 bits (654), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 129/211 (61%), Positives = 158/211 (74%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  EG  +PVTVL ++ CQVV  RT + +GY AVQ+GAG AKVK 
Sbjct: 1   MRSGLIAQKVGMTRLFTDEGTHVPVTVLKVEACQVVAVRTSETDGYTAVQLGAGVAKVKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F++  V PKKK+ EFRV  +D LL  G+  S ++F  GQ VD+ G TIGKGF
Sbjct: 61  TSKAMRGHFAAAKVEPKKKVVEFRVS-EDCLLEPGAELSAAHFVAGQKVDIAGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNF GL ATHGVS+SHRSHGSTG  QDPGRVFK KKMAG MG  R+T ++L VV
Sbjct: 120 AGAMKRHNFRGLEATHGVSVSHRSHGSTGQCQDPGRVFKGKKMAGHMGDTRITQQSLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           + D  RGLILVKG VPGA   +W+ VRD+ K
Sbjct: 180 ATDADRGLILVKGSVPGA-DGAWLEVRDAVK 209


>gi|126736644|ref|ZP_01752384.1| ribosomal protein L3 [Roseobacter sp. CCS2]
 gi|126713957|gb|EBA10828.1| ribosomal protein L3 [Roseobacter sp. CCS2]
          Length = 283

 Score =  255 bits (652), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 123/211 (58%), Positives = 161/211 (76%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+G++A+K+GMT ++  +G++IPVTVL L+N QVV  RT D NGY AVQ+GAG AK K 
Sbjct: 2   LRTGLIAKKVGMTRLFMEDGKQIPVTVLSLENLQVVAQRTADTNGYTAVQLGAGNAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F++  V PK+K+ EFRV  ++ ++ VG   + +++  GQ VDV G +IGKGF
Sbjct: 62  TSKAMRGHFAAAKVEPKRKVAEFRVAPEN-MINVGETLTANHYFEGQYVDVCGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  +VT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAAKVTTQNLQVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RG+I+VKG VPG+ K  W+ ++D+ K
Sbjct: 181 KTDADRGVIMVKGAVPGS-KGGWVTIKDAVK 210


>gi|114327218|ref|YP_744375.1| 50S ribosomal protein L3 [Granulibacter bethesdensis CGDNIH1]
 gi|122327802|sp|Q0BUQ0|RL3_GRABC RecName: Full=50S ribosomal protein L3
 gi|114315392|gb|ABI61452.1| LSU ribosomal protein L3P [Granulibacter bethesdensis CGDNIH1]
          Length = 231

 Score =  255 bits (652), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 127/211 (60%), Positives = 160/211 (75%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++ARKLGMT ++  +G  +PVTVLHLD  QVV  RT +++GY AVQ+G G+AK K+
Sbjct: 1   MRTGLIARKLGMTRLFKEDGTHVPVTVLHLDQVQVVDTRTKERDGYTAVQLGFGQAKPKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK  +G F+ V V PKKKL EFRV +D  L P G+  S  +F VGQ VDVTG + GKGF
Sbjct: 61  VSKANKGHFARVKVEPKKKLVEFRVAEDAILEP-GATLSAEHFLVGQKVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NF GL A+HGVSISHRSHGSTG RQDPG+ FKNKKMAG +G  RVT +N+EV 
Sbjct: 120 AGAMKRWNFAGLEASHGVSISHRSHGSTGNRQDPGKTFKNKKMAGHLGDERVTTQNVEVA 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD  RGL++++G +PGA K  ++LVRD+ K
Sbjct: 180 HVDAARGLLMIRGSIPGA-KGGYVLVRDAVK 209


>gi|114771269|ref|ZP_01448689.1| 50S ribosomal protein L3 [alpha proteobacterium HTCC2255]
 gi|114548194|gb|EAU51081.1| 50S ribosomal protein L3 [alpha proteobacterium HTCC2255]
          Length = 247

 Score =  255 bits (652), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 126/211 (59%), Positives = 159/211 (75%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT ++  +G+++PVTVL ++N QVV  RT + +GY AVQ+GAG AK K 
Sbjct: 1   MRSGVIAKKIGMTRLFMEDGKQVPVTVLQMENLQVVSQRTNETDGYTAVQLGAGVAKAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S  MRG F+   V PK+K+ EFRV  D+ L+ VG     ++F  GQ VDV+G +IGKGF
Sbjct: 61  QSAAMRGHFAKAKVEPKRKIAEFRVSADN-LIEVGEEIVANHFLDGQKVDVSGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRATHGVS+SHRSHGSTG  Q+PG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRHNFGGLRATHGVSVSHRSHGSTGQCQEPGKVFKGKKMAGHMGSARVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RGLI++KG VPG+ K  W+ V+DS K
Sbjct: 180 RTDIDRGLIMIKGAVPGS-KGGWVTVKDSVK 209


>gi|91977652|ref|YP_570311.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris BisB5]
 gi|123748930|sp|Q134S9|RL3_RHOPS RecName: Full=50S ribosomal protein L3
 gi|91684108|gb|ABE40410.1| LSU ribosomal protein L3P [Rhodopseudomonas palustris BisB5]
          Length = 241

 Score =  254 bits (650), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 129/214 (60%), Positives = 157/214 (73%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  IPVTVL L NCQVV HRT +KNGY+A+Q+G+G  K   
Sbjct: 1   MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLGNCQVVAHRTTEKNGYVALQLGSGARKTVY 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + K  RG F+   V PK+K+ EFRV  +D L+PVG+     +F VGQ VDVTG + GKGF
Sbjct: 61  MPKAERGQFAVAKVEPKRKVAEFRVS-EDALIPVGAEIQADHFVVGQFVDVTGTSTGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T  NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
             D +RGLILV+G VPG+ K  WI VRD+ K A+
Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWISVRDAVKKAL 212


>gi|149203511|ref|ZP_01880481.1| 50S ribosomal protein L3 [Roseovarius sp. TM1035]
 gi|149143344|gb|EDM31383.1| 50S ribosomal protein L3 [Roseovarius sp. TM1035]
          Length = 280

 Score =  254 bits (649), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 122/211 (57%), Positives = 160/211 (75%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSGV+A+K+GMT ++  +G+++PVTVL LD  QVV  RT +K+GY AVQ+GAG AK K 
Sbjct: 2   LRSGVIAKKVGMTRLFLEDGKQVPVTVLQLDKLQVVAQRTPEKDGYTAVQLGAGTAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            ++ MRG F++  V PK+K+ EFRV   + L+ VG   +  ++  GQ VDV+G +IGKGF
Sbjct: 62  TTQAMRGHFAAAKVEPKRKIAEFRV-APEALINVGEEITADHYFEGQFVDVSGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RGLI++KG VPG+ K  W+ ++D+ K
Sbjct: 181 KTDADRGLIMIKGAVPGS-KGGWVTIKDAVK 210


>gi|146340057|ref|YP_001205105.1| 50S ribosomal protein L3 [Bradyrhizobium sp. ORS278]
 gi|166233121|sp|A4YSJ2|RL3_BRASO RecName: Full=50S ribosomal protein L3
 gi|146192863|emb|CAL76868.1| 50S ribosomal subunit protein L3 [Bradyrhizobium sp. ORS278]
          Length = 239

 Score =  254 bits (649), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 129/211 (61%), Positives = 156/211 (73%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  IPVTVL L NCQVV HRT +KNGY+A+Q+G+G  K   
Sbjct: 1   MRSGVIAQKVGMTRVFTETGEHIPVTVLKLGNCQVVGHRTTEKNGYVALQLGSGSRKTVY 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + K  RG F+   V PK+KL EFRV  +D L+PVG+     +F VGQ VDVTG ++GKGF
Sbjct: 61  MPKAERGQFAVAKVEPKRKLAEFRVS-EDSLIPVGAEIQADHFVVGQFVDVTGTSVGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ +KNKKM G MG +R+T  NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTWKNKKMPGHMGVDRITTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGLILV+G VPG+ K  WI VRD+ K
Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWISVRDAVK 209


>gi|86749415|ref|YP_485911.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris HaA2]
 gi|109893547|sp|Q2IXR0|RL3_RHOP2 RecName: Full=50S ribosomal protein L3
 gi|86572443|gb|ABD07000.1| LSU ribosomal protein L3P [Rhodopseudomonas palustris HaA2]
          Length = 241

 Score =  254 bits (648), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 128/214 (59%), Positives = 159/214 (74%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  IPVTVL L NCQV+ HRT +KNGY+A+Q+G+G  K   
Sbjct: 1   MRSGVIAQKVGMTRVFTETGEHIPVTVLKLGNCQVLAHRTTEKNGYVALQLGSGARKTVY 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + K  RG F+   V PK+K+ EFRV  +D L+PVG+     +F VGQ VDVTG ++GKGF
Sbjct: 61  MPKAERGQFAVAKVEPKRKVAEFRVS-EDALIPVGAEIQADHFVVGQFVDVTGTSVGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T  NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            +D +RGLILV+G VPG+ K  WI VRD+ K A+
Sbjct: 180 QLDVERGLILVEGAVPGS-KGGWISVRDAVKKAL 212


>gi|39936313|ref|NP_948589.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris CGA009]
 gi|192292037|ref|YP_001992642.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris TIE-1]
 gi|316933527|ref|YP_004108509.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris DX-1]
 gi|42559577|sp|P60456|RL3_RHOPA RecName: Full=50S ribosomal protein L3; AltName: Full=RRP-L3
 gi|226730557|sp|B3QBY0|RL3_RHOPT RecName: Full=50S ribosomal protein L3
 gi|39650168|emb|CAE28691.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris CGA009]
 gi|192285786|gb|ACF02167.1| ribosomal protein L3 [Rhodopseudomonas palustris TIE-1]
 gi|315601241|gb|ADU43776.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris DX-1]
          Length = 241

 Score =  253 bits (647), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 131/214 (61%), Positives = 157/214 (73%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  IPVTVL L NCQV+ HRT +KNGY+A+QVG+G  K   
Sbjct: 1   MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLGNCQVLGHRTKEKNGYVALQVGSGSRKTVY 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + K  RG F++  V PK+K+ EFRV  +D LLPVG+     +F VGQ VDVTG + GKGF
Sbjct: 61  MPKAERGQFAAAKVEPKRKVEEFRVS-EDALLPVGAEIQADHFVVGQFVDVTGTSTGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +RVT  NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRVTTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
             D +RGLILV+G VPG  K  WI VRD+ K A+
Sbjct: 180 QTDVERGLILVEGAVPGT-KGGWIRVRDAVKKAL 212


>gi|254294440|ref|YP_003060463.1| ribosomal protein L3 [Hirschia baltica ATCC 49814]
 gi|254042971|gb|ACT59766.1| ribosomal protein L3 [Hirschia baltica ATCC 49814]
          Length = 243

 Score =  253 bits (647), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 129/214 (60%), Positives = 160/214 (74%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+KLGMT V+  +G  IPVTVL LD CQVV  RT +++GY+A+Q+GAG  K KN
Sbjct: 1   MRTGLLAKKLGMTRVFGEDGAHIPVTVLQLDGCQVVGQRTKERDGYVALQLGAGSRKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPMRG F++  V PK  L EFRV  +D L+ VG+ FS  +F  GQ VD+ G   GKGF
Sbjct: 61  VTKPMRGQFAAAKVEPKAVLREFRVD-EDMLVDVGAEFSAEHFVPGQKVDIAGTAKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRA+HGVSISHR+ GSTG  QDPG+VFK KKMAG+ G  R+T +N+EVV
Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRALGSTGQCQDPGKVFKGKKMAGQYGNVRITTQNIEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            VD  RGL+LVKG VP A KN W+ VRD+ K A 
Sbjct: 180 RVDADRGLVLVKGAVPSA-KNGWVEVRDAVKKAA 212


>gi|85703987|ref|ZP_01035090.1| 50S ribosomal protein L3 [Roseovarius sp. 217]
 gi|85671307|gb|EAQ26165.1| 50S ribosomal protein L3 [Roseovarius sp. 217]
          Length = 280

 Score =  253 bits (647), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 119/211 (56%), Positives = 161/211 (76%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSGV+A+K+GMT ++  +G+++PVTVL LD  QVV  RT +K+GY AVQ+GAG AK K 
Sbjct: 2   LRSGVIAKKVGMTRLFLEDGKQVPVTVLQLDKLQVVAQRTPEKDGYTAVQLGAGTAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            ++ MRG F++  V PK+K+ EFRV   ++++ VG   +  ++  GQ VDV+G +IGKGF
Sbjct: 62  TTQAMRGHFAAAKVEPKRKIAEFRVA-PENMINVGEEITADHYFEGQFVDVSGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  +VT +NL+V+
Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAAKVTTQNLQVI 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RGLI++KG VPG+ K  W+ ++D+ K
Sbjct: 181 KTDADRGLIMIKGAVPGS-KGGWVTIKDAVK 210


>gi|126732274|ref|ZP_01748074.1| ribosomal protein L3 [Sagittula stellata E-37]
 gi|126707143|gb|EBA06209.1| ribosomal protein L3 [Sagittula stellata E-37]
          Length = 279

 Score =  253 bits (646), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 126/214 (58%), Positives = 158/214 (73%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+  +G++IPVTVL LDN QVV  RT + NGY AV +G G AK K 
Sbjct: 1   MRSGVIAKKIGMTRVFMEDGKQIPVTVLQLDNLQVVAQRTDETNGYSAVALGCGTAKAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ MR  FS+  V PK+K+ EFRV   ++L+ VG      ++  GQ VDV+G+TIGKGF
Sbjct: 61  TSQAMRKVFSNAGVEPKRKIVEFRV-APENLIEVGEEIIADHYFEGQFVDVSGITIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGGLRATHGVSISHRSHGSTG  Q+PG+VFK KKMAG MG  RVT +NL+VV
Sbjct: 120 AGGMKRHNFGGLRATHGVSISHRSHGSTGQCQNPGKVFKGKKMAGHMGSVRVTTQNLQVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
             D  RG+I++KG VPG  K SW+ ++D+ K  V
Sbjct: 180 RTDSDRGVIMIKGAVPGP-KGSWVTIKDAVKKPV 212


>gi|148256392|ref|YP_001240977.1| 50S ribosomal protein L3 [Bradyrhizobium sp. BTAi1]
 gi|166233120|sp|A5ELM7|RL3_BRASB RecName: Full=50S ribosomal protein L3
 gi|146408565|gb|ABQ37071.1| LSU ribosomal protein L3P [Bradyrhizobium sp. BTAi1]
          Length = 239

 Score =  253 bits (646), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 130/211 (61%), Positives = 156/211 (73%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  IPVTVL L NCQVV HRT +KNGY+A+Q+G+G  K   
Sbjct: 1   MRSGVIAQKVGMTRVFTETGEHIPVTVLKLGNCQVVGHRTTEKNGYVALQLGSGSRKTVY 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + K  RG F+   V PK+K+ EFRV  +D L+PVG+     +F VGQ VDVTG T+GKGF
Sbjct: 61  MPKAERGQFAVAKVEPKRKVAEFRVS-EDSLIPVGAEILADHFVVGQFVDVTGTTVGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ +KNKKM G MG +RVT  NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTWKNKKMPGHMGVDRVTTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGLILV+G VPG+ K  WI VRD+ K
Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWISVRDAVK 209


>gi|302382618|ref|YP_003818441.1| 50S ribosomal protein L3 [Brevundimonas subvibrioides ATCC 15264]
 gi|302193246|gb|ADL00818.1| 50S ribosomal protein L3 [Brevundimonas subvibrioides ATCC 15264]
          Length = 250

 Score =  253 bits (646), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 123/211 (58%), Positives = 157/211 (74%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+KLGMT V+  +G+ +PVTVL LD+CQVV  RT +++GY+A+Q+GAG  K KN
Sbjct: 1   MRTGVIAKKLGMTRVFADDGQHVPVTVLQLDDCQVVGQRTQERDGYVALQLGAGTKKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +K  R  F++  V PK  + EFRV  DD ++ VG+  S  +F VGQ VD+ G TIGKGF
Sbjct: 61  TNKAQRTTFATAEVEPKHVVMEFRV-TDDAMIDVGATLSADHFVVGQKVDIQGETIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FK KKMAG++G   +T +NL +V
Sbjct: 120 QGGMKRWNFGGLRATHGVSVSHRSLGSTGQRQDPGKTFKGKKMAGQLGNETITTQNLTIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +RGLILVKG VPG  + SW+ VRD+ K
Sbjct: 180 RVDAERGLILVKGAVPG-HEGSWVKVRDAHK 209


>gi|212288598|sp|A5V602|RL3_SPHWW RecName: Full=50S ribosomal protein L3
          Length = 251

 Score =  253 bits (645), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 125/214 (58%), Positives = 156/214 (72%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR +PVTVL L+N QVV  R  D++GY+AVQ+GAG AK KN
Sbjct: 1   MRTGVIAKKMGMTRLFQEDGRHVPVTVLALENVQVVARREQDRDGYVAVQLGAGSAKPKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP RG F    V PK  + EFRV  +D LL VG+  S  ++  GQ VD+ G T GKGF
Sbjct: 61  LTKPERGHFGKAEVEPKAFVAEFRV-SEDGLLDVGAEISADHYVAGQFVDIQGSTQGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR  FGGLRATHGVS+SHRS GSTG RQDPG+VFKNKKMAG MG    T +NLE+V
Sbjct: 120 AGGMKRWGFGGLRATHGVSVSHRSLGSTGQRQDPGKVFKNKKMAGHMGDKNRTQQNLEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
             D +RGL+ VKG VPG+ K  W+LV+DS K A 
Sbjct: 180 QTDAERGLLFVKGSVPGS-KGGWLLVKDSVKIAA 212


>gi|51473839|ref|YP_067596.1| 50S ribosomal protein L3 [Rickettsia typhi str. Wilmington]
 gi|81826293|sp|Q68W78|RL3_RICTY RecName: Full=50S ribosomal protein L3
 gi|51460151|gb|AAU04114.1| 50S ribosomal protein L3 [Rickettsia typhi str. Wilmington]
          Length = 215

 Score =  253 bits (645), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 115/213 (53%), Positives = 165/213 (77%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+K+GMT V+N +G RI +T++ +D CQVV H+TL K+GY A+ +G  + K+  
Sbjct: 1   MRTGIIAQKIGMTSVFNDKGERISLTLVKVDGCQVVGHKTLAKHGYNALVIGVKDQKISR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+  F++  +SPK KL EFR+  +D+ + + S+    +F+VGQ VD+T  TIGKGF
Sbjct: 61  VTKPMKQVFANAKISPKTKLKEFRIS-EDNFIDIASILEVDHFSVGQFVDITATTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ 
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           ++D  R LI+++G +PG  KNS++LV+D+ K A
Sbjct: 180 AIDTNRKLIMIQGSIPG-HKNSYLLVKDAIKKA 211


>gi|149915844|ref|ZP_01904368.1| 30S ribosomal protein S10 [Roseobacter sp. AzwK-3b]
 gi|149810167|gb|EDM70013.1| 30S ribosomal protein S10 [Roseobacter sp. AzwK-3b]
          Length = 276

 Score =  253 bits (645), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 124/211 (58%), Positives = 158/211 (74%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSGV+A+K+GMT ++  +GR++PVTVL LD  QVV  RT +K+GY AVQ+GAG  K K 
Sbjct: 2   LRSGVIAKKVGMTRLFMEDGRQVPVTVLQLDKLQVVAQRTPEKDGYTAVQLGAGSIKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS+PMRG F+S  V PK+K+ EFRV   ++++ VG   +  ++  GQ VDV G +IGKGF
Sbjct: 62  VSQPMRGHFASAKVEPKRKIAEFRV-APENMINVGEEITADHYFAGQYVDVCGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNF GL  THGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NL+VV
Sbjct: 121 AGAMKRHNFKGLEMTHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RGLI+VKG VPG+ K  W+ ++D+ K
Sbjct: 181 KTDADRGLIMVKGAVPGS-KGGWVTIKDAVK 210


>gi|75675556|ref|YP_317977.1| 50S ribosomal protein L3 [Nitrobacter winogradskyi Nb-255]
 gi|109893531|sp|Q3SSW6|RL3_NITWN RecName: Full=50S ribosomal protein L3
 gi|74420426|gb|ABA04625.1| LSU ribosomal protein L3P [Nitrobacter winogradskyi Nb-255]
          Length = 247

 Score =  252 bits (644), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 127/211 (60%), Positives = 157/211 (74%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  IPVTVL L NCQV+ HRT +KNGY+A+Q+G+G  K   
Sbjct: 1   MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLSNCQVLGHRTSEKNGYVALQLGSGARKTVY 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + K  RG F+   V+PK+K+ EFRV  +D L+PVG+     +F VGQ VDVTG ++GKG+
Sbjct: 61  MPKAERGQFAVAKVAPKRKVAEFRVS-EDSLIPVGAEIQADHFVVGQFVDVTGTSVGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G MG +R+T  NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGLILV+G VPG+ K  WI VRD+ K
Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWIAVRDAVK 209


>gi|115525585|ref|YP_782496.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris BisA53]
 gi|122295408|sp|Q07KL8|RL3_RHOP5 RecName: Full=50S ribosomal protein L3
 gi|115519532|gb|ABJ07516.1| LSU ribosomal protein L3P [Rhodopseudomonas palustris BisA53]
          Length = 240

 Score =  252 bits (644), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 125/216 (57%), Positives = 159/216 (73%), Gaps = 2/216 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  IPVTVL L NCQV+ HRT +KNGY A+Q+G+G  K   
Sbjct: 1   MRSGVIAQKVGMTRVFTETGEHIPVTVLKLGNCQVLGHRTSEKNGYTALQLGSGSRKTVY 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + K  RG F++  V PK+K+ EFRV  +D ++P+G+     +F VGQ VDVTG ++GKGF
Sbjct: 61  MPKAERGQFAAAKVEPKRKVAEFRVS-EDSMIPIGAEIQADHFVVGQFVDVTGTSVGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T  NL VV
Sbjct: 120 AGGIKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            +D +RGLILV+G VPG+ K  WI VRD+ K A+  
Sbjct: 180 QLDVERGLILVEGAVPGS-KGGWIAVRDAVKKALPA 214


>gi|254501408|ref|ZP_05113559.1| ribosomal protein L3 [Labrenzia alexandrii DFL-11]
 gi|222437479|gb|EEE44158.1| ribosomal protein L3 [Labrenzia alexandrii DFL-11]
          Length = 232

 Score =  252 bits (644), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 125/210 (59%), Positives = 157/210 (74%), Gaps = 2/210 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++A+K+GMT +YN  G  +PVTVL L+NCQVV HRT +KNGY A+Q+GAG  KVKN  K 
Sbjct: 1   MIAQKVGMTRIYNDAGEHVPVTVLRLENCQVVAHRTDEKNGYNALQLGAGTRKVKNTPKA 60

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           +RG F+   V PK+ + EFRV  ++ ++ VG+  +  ++  GQ VDVTG +IGKGF+G M
Sbjct: 61  LRGHFAVAKVEPKRTVVEFRVSAEN-MIDVGAEITADHYVEGQFVDVTGTSIGKGFAGVM 119

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHNFGG RA+HG SISHRSHGSTG  QDPGRVFK KKMAG MG  RVT +NL+VV  D 
Sbjct: 120 KRHNFGGGRASHGNSISHRSHGSTGQCQDPGRVFKGKKMAGHMGDARVTTQNLKVVRTDV 179

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           +RGLI+V+G VPGA K  WI VRD+ K A+
Sbjct: 180 ERGLIMVEGSVPGA-KGGWIQVRDAIKKAL 208


>gi|15604505|ref|NP_221023.1| 50S ribosomal protein L3 [Rickettsia prowazekii str. Madrid E]
 gi|6226691|sp|P48952|RL3_RICPR RecName: Full=50S ribosomal protein L3
 gi|3861199|emb|CAA15099.1| 50S RIBOSOMAL PROTEIN L3 (rplC) [Rickettsia prowazekii]
 gi|292572287|gb|ADE30202.1| 50S ribosomal protein L3 [Rickettsia prowazekii Rp22]
          Length = 216

 Score =  252 bits (644), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 115/213 (53%), Positives = 165/213 (77%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL K+GY A+ +G  + K+  
Sbjct: 1   MRTGIIAQKVGMTSVFNDKGERISLTLVKVDDCQVVGHKTLAKHGYNALVIGVKDQKISK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+  F++  ++PK KL EFR+  +D+ + + S+    +F VGQ VD+T  TIGKGF
Sbjct: 61  VTKPMKQVFANAKIAPKTKLKEFRIS-EDNFIDIASILEVDHFRVGQFVDITATTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ 
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNKVTIQNLKIF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           +VD  R LI+++G +PG  KNS++LV+D+ K A
Sbjct: 180 AVDTNRKLIMIQGSIPG-HKNSYLLVKDAIKKA 211


>gi|92117098|ref|YP_576827.1| 50S ribosomal protein L3 [Nitrobacter hamburgensis X14]
 gi|123083705|sp|Q1QN30|RL3_NITHX RecName: Full=50S ribosomal protein L3
 gi|91799992|gb|ABE62367.1| LSU ribosomal protein L3P [Nitrobacter hamburgensis X14]
          Length = 241

 Score =  252 bits (644), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 128/211 (60%), Positives = 156/211 (73%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  IPVTVL L NCQV+ HRT +KNGY+A+Q+G+G  K   
Sbjct: 1   MRSGVIAQKVGMTRVFTDAGEHIPVTVLRLSNCQVLGHRTSEKNGYVALQLGSGARKTVY 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + K  RG F+   V PK+K+ EFRV  +D L+PVG+     +F VGQ VDVTG ++GKGF
Sbjct: 61  LPKAERGQFAVAKVEPKRKVAEFRVS-EDSLIPVGAEIQADHFVVGQFVDVTGTSVGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +RVT  NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRVTTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGLILV+G VPG+ K  WI VRD+ K
Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWIAVRDAVK 209


>gi|85715131|ref|ZP_01046115.1| 50S ribosomal protein L3 [Nitrobacter sp. Nb-311A]
 gi|85698046|gb|EAQ35919.1| 50S ribosomal protein L3 [Nitrobacter sp. Nb-311A]
          Length = 247

 Score =  252 bits (643), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 127/211 (60%), Positives = 156/211 (73%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  IPVTVL L NCQV+ HRT +KNGY+A+Q+G+G  K   
Sbjct: 1   MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLSNCQVLGHRTSEKNGYVALQLGSGARKTVY 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + K  RG F+   V PK+K+ EFRV +D  L+PVG+     +F VGQ VDVTG ++GKG+
Sbjct: 61  MPKAERGQFAVAKVEPKRKVAEFRVSQDS-LIPVGAEIQADHFVVGQFVDVTGTSVGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G MG +R+T  NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGLILV+G VPG+ K  WI VRD+ K
Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWIAVRDAVK 209


>gi|300022541|ref|YP_003755152.1| 50S ribosomal protein L3 [Hyphomicrobium denitrificans ATCC 51888]
 gi|299524362|gb|ADJ22831.1| 50S ribosomal protein L3 [Hyphomicrobium denitrificans ATCC 51888]
          Length = 233

 Score =  251 bits (641), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 121/216 (56%), Positives = 157/216 (72%), Gaps = 2/216 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT ++   G  +PVTVL L+N QV+ HRT++KNGY A+QVG G  K   
Sbjct: 1   MRSGVIAQKVGMTRIFTDAGEHVPVTVLRLENLQVLSHRTVEKNGYTAIQVGGGTRKPSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++K  RG F+   V PK+K+ EFRV  ++ L+ VG+  +  +F  GQ VDVTG T GKGF
Sbjct: 61  LTKADRGTFAKAEVEPKRKIAEFRVSPEN-LIDVGAEITADHFVPGQFVDVTGTTQGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GAMKR NFGGLRATHGVS++HR+HGSTG RQDPG+VFK KKMAG +G  RVT +NL V 
Sbjct: 120 QGAMKRWNFGGLRATHGVSVTHRAHGSTGQRQDPGKVFKGKKMAGHLGDERVTTQNLVVA 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            +D  RGL++V+G VPG+ K  W++VRD+ K A   
Sbjct: 180 KIDKARGLVMVRGAVPGS-KGGWVIVRDAVKKAAPA 214


>gi|148554274|ref|YP_001261856.1| 50S ribosomal protein L3 [Sphingomonas wittichii RW1]
 gi|148499464|gb|ABQ67718.1| LSU ribosomal protein L3P [Sphingomonas wittichii RW1]
          Length = 317

 Score =  251 bits (640), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 125/214 (58%), Positives = 156/214 (72%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR +PVTVL L+N QVV  R  D++GY+AVQ+GAG AK KN
Sbjct: 67  MRTGVIAKKMGMTRLFQEDGRHVPVTVLALENVQVVARREQDRDGYVAVQLGAGSAKPKN 126

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP RG F    V PK  + EFRV  +D LL VG+  S  ++  GQ VD+ G T GKGF
Sbjct: 127 LTKPERGHFGKAEVEPKAFVAEFRVS-EDGLLDVGAEISADHYVAGQFVDIQGSTQGKGF 185

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR  FGGLRATHGVS+SHRS GSTG RQDPG+VFKNKKMAG MG    T +NLE+V
Sbjct: 186 AGGMKRWGFGGLRATHGVSVSHRSLGSTGQRQDPGKVFKNKKMAGHMGDKNRTQQNLEIV 245

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
             D +RGL+ VKG VPG+ K  W+LV+DS K A 
Sbjct: 246 QTDAERGLLFVKGSVPGS-KGGWLLVKDSVKIAA 278


>gi|299135257|ref|ZP_07028448.1| 50S ribosomal protein L3 [Afipia sp. 1NLS2]
 gi|298590234|gb|EFI50438.1| 50S ribosomal protein L3 [Afipia sp. 1NLS2]
          Length = 243

 Score =  251 bits (640), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 127/211 (60%), Positives = 155/211 (73%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  IPVTVL L NCQVV HRT DKNGY A+Q+G+G  K   
Sbjct: 1   MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLGNCQVVGHRTKDKNGYTALQLGSGARKSVY 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + K  RG F+   V PK+K+ EFRV  DD ++PVG+  +  +F  GQ VDVTG ++GKGF
Sbjct: 61  MPKAERGQFAVAKVEPKRKVVEFRVS-DDAVIPVGAEITADHFVAGQFVDVTGTSVGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T  NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGL+LV+G VPG+ K  WI VRD+ K
Sbjct: 180 QTDVERGLLLVEGAVPGS-KGGWITVRDAVK 209


>gi|315497973|ref|YP_004086777.1| 50S ribosomal protein l3 [Asticcacaulis excentricus CB 48]
 gi|315415985|gb|ADU12626.1| 50S ribosomal protein L3 [Asticcacaulis excentricus CB 48]
          Length = 243

 Score =  250 bits (639), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 124/214 (57%), Positives = 157/214 (73%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+KLGMT  ++ +G+ +PVTVL L+ CQVV  RT DK+GY A+Q+GAG  K KN
Sbjct: 1   MRTGLLAKKLGMTRYFDAQGQHVPVTVLSLEGCQVVAQRTKDKDGYTALQLGAGTRKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKP R  F+   V PK  L EFRV  +D L+ VG+ FS  +F  GQ VD+ G TIGKGF
Sbjct: 61  VSKPERERFAKAQVEPKAILSEFRVS-EDALVEVGAEFSADHFVEGQRVDIQGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGG+RATHGVS+SHR+HGSTG RQDPGR F  KKMAG  G   VT  NLEVV
Sbjct: 120 AGAMKRWNFGGMRATHGVSVSHRAHGSTGNRQDPGRTFPGKKMAGHYGVETVTTLNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            +D +RGLI ++G VPGA + S++ +RD+ K + 
Sbjct: 180 RIDAERGLIFIRGAVPGA-EGSFVKIRDAVKKSA 212


>gi|296533987|ref|ZP_06896503.1| 50S ribosomal protein L3 [Roseomonas cervicalis ATCC 49957]
 gi|296265653|gb|EFH11762.1| 50S ribosomal protein L3 [Roseomonas cervicalis ATCC 49957]
          Length = 228

 Score =  250 bits (639), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 128/212 (60%), Positives = 159/212 (75%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A+KLGMT ++N +G  +PVTVLHLD  +VV  RT +K+GY AVQ+G G AK KNV
Sbjct: 7   RTGLIAKKLGMTRLFNDDGSTVPVTVLHLDQVRVVAARTEEKDGYNAVQLGFGLAKPKNV 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SKP +G F+   V   KK+ EFRV  D  L P G+  S ++F  GQ+VDVTG + GKGF+
Sbjct: 67  SKPNKGHFAKAGVEAPKKVVEFRVAADAMLEP-GAKLSANHFVKGQIVDVTGTSKGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           GAMKR NF GL ATHGVSISHRSHGSTG RQDPG+ FKNKKMAG +G  RVT +NLEV  
Sbjct: 126 GAMKRWNFSGLEATHGVSISHRSHGSTGNRQDPGKTFKNKKMAGHLGVERVTTQNLEVAG 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D ++GL+LVKG VPGA K  ++LVRD+ K+A
Sbjct: 186 FDLEKGLLLVKGAVPGA-KGGYVLVRDAVKTA 216


>gi|118591184|ref|ZP_01548583.1| 50S ribosomal protein L3 [Stappia aggregata IAM 12614]
 gi|118436260|gb|EAV42902.1| 50S ribosomal protein L3 [Stappia aggregata IAM 12614]
          Length = 225

 Score =  250 bits (638), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 124/203 (61%), Positives = 152/203 (74%), Gaps = 2/203 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT +YN  G  +PVTVL L+NCQVV HRT +KNGY A+Q+GAG  KVKN  K +RG F+ 
Sbjct: 1   MTRIYNDAGEHVPVTVLRLENCQVVAHRTDEKNGYTALQLGAGTRKVKNTPKALRGHFAV 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             V PK+ + EFRV  ++ L+ VG+  +  ++  GQ VDVTG +IGKGF+GAMKRHNFGG
Sbjct: 61  AKVEPKRTVAEFRVSAEN-LIDVGAELTADHYVEGQFVDVTGTSIGKGFAGAMKRHNFGG 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
            RA+HG S+SHRSHGSTG  QDPGRVFK KKMAG MG  RVT +NL+VV  D +RGLI+V
Sbjct: 120 GRASHGNSVSHRSHGSTGQCQDPGRVFKGKKMAGHMGDARVTTQNLKVVRTDVERGLIMV 179

Query: 192 KGCVPGAKKNSWILVRDSFKSAV 214
           +G VPGA K  WILVRD+ K A+
Sbjct: 180 EGSVPGA-KGGWILVRDAIKKAL 201


>gi|67458670|ref|YP_246294.1| 50S ribosomal protein L3 [Rickettsia felis URRWXCal2]
 gi|75536865|sp|Q4UMS9|RL3_RICFE RecName: Full=50S ribosomal protein L3
 gi|67004203|gb|AAY61129.1| 50S ribosomal protein L3 [Rickettsia felis URRWXCal2]
          Length = 215

 Score =  250 bits (638), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 113/211 (53%), Positives = 164/211 (77%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G  + K+  
Sbjct: 1   MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGIKDKKISR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+  F++  +SPK KL EFR+  +++ + + +     YFT GQ VD+T  TIGKGF
Sbjct: 61  VTKPMKQVFANAKISPKTKLKEFRIS-EENFIDIAASLEVDYFTAGQFVDITATTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ 
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +VD +R LI+++G +PG  KNS++ V+D+ K
Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIK 209


>gi|239948319|ref|ZP_04700072.1| 50S ribosomal protein L3 [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239922595|gb|EER22619.1| 50S ribosomal protein L3 [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 215

 Score =  249 bits (637), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 113/211 (53%), Positives = 165/211 (78%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G  + K+  
Sbjct: 1   MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V KPM+  F++  +SPK KL EFR+  +++ + + +     +FT GQ VD+T +TIGKGF
Sbjct: 61  VIKPMKQVFANAKISPKTKLKEFRIS-EENFIDIAASLEVDHFTAGQFVDITAITIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ 
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +VD +R LI+++G +PG  KNS++LV+D+ K
Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLLVKDAIK 209


>gi|329114217|ref|ZP_08242979.1| 50S ribosomal protein L3 [Acetobacter pomorum DM001]
 gi|326696293|gb|EGE47972.1| 50S ribosomal protein L3 [Acetobacter pomorum DM001]
          Length = 238

 Score =  249 bits (637), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 128/213 (60%), Positives = 164/213 (76%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+KLGM+ ++  +G  +PVTVLH+D+ QVV  R  +++GY+AVQ+G G+AKVKN
Sbjct: 12  MRTGLIAKKLGMSRLFKEDGTHVPVTVLHVDDVQVVDVRNQERDGYVAVQLGMGKAKVKN 71

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP RG F+   V PK+ L EFRV  DD  L VG+  S S+F VGQ VDVTG++ GKGF
Sbjct: 72  VTKPNRGHFARTKVEPKQALREFRVA-DDAALEVGATLSASHFVVGQKVDVTGVSKGKGF 130

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NF GL ATHGVSISHRSHGSTG RQDPG+ FKNKKMAG +G  RVT  NLE+ 
Sbjct: 131 AGAMKRWNFAGLEATHGVSISHRSHGSTGNRQDPGKTFKNKKMAGHLGDERVTTLNLEIA 190

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           +VD ++ LI+V+G VPGA KN  +L+RD+ K A
Sbjct: 191 AVDPEKNLIMVRGSVPGA-KNGVVLIRDAIKKA 222


>gi|229587009|ref|YP_002845510.1| 50S ribosomal protein L3 [Rickettsia africae ESF-5]
 gi|259709733|sp|C3PPA7|RL3_RICAE RecName: Full=50S ribosomal protein L3
 gi|228022059|gb|ACP53767.1| 50S ribosomal protein L3 [Rickettsia africae ESF-5]
          Length = 215

 Score =  249 bits (637), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 114/211 (54%), Positives = 164/211 (77%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ VG  + K+  
Sbjct: 1   MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVVGVKDKKISR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPMR  F++  +SPK KL EFR+  +++ + + +     +FT GQ VD+T  TIGKGF
Sbjct: 61  VTKPMRQVFANAKISPKTKLKEFRIS-EENFIDIAASLEVDHFTAGQFVDITATTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ 
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +VD +R LI+++G +PG  KNS++ V+D+ K
Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIK 209


>gi|90424937|ref|YP_533307.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris BisB18]
 gi|109893548|sp|Q211E8|RL3_RHOPB RecName: Full=50S ribosomal protein L3
 gi|90106951|gb|ABD88988.1| LSU ribosomal protein L3P [Rhodopseudomonas palustris BisB18]
          Length = 243

 Score =  249 bits (637), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 126/211 (59%), Positives = 155/211 (73%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  IPVTVL L NCQV+ HRT +KNGY+A+Q+G+G  K   
Sbjct: 1   MRSGVIAQKVGMTRVFTETGEHIPVTVLKLGNCQVLGHRTTEKNGYVAMQLGSGTRKTVY 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + K  RG F+   V PK+K+ EFRV  +D L+PVG+     +F VGQ VDVTG ++GKGF
Sbjct: 61  LPKAERGQFAVAKVEPKRKVAEFRVS-EDALIPVGAEIQADHFVVGQFVDVTGTSVGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T  NL VV
Sbjct: 120 AGGIKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RGLILV+G VPG+ K  WI VRD+ K
Sbjct: 180 QTDVARGLILVEGAVPGS-KGGWIAVRDAVK 209


>gi|15892929|ref|NP_360643.1| 50S ribosomal protein L3 [Rickettsia conorii str. Malish 7]
 gi|42559674|sp|Q92GW6|RL3_RICCN RecName: Full=50S ribosomal protein L3
 gi|15620121|gb|AAL03544.1| 50S ribosomal protein L3 [Rickettsia conorii str. Malish 7]
          Length = 215

 Score =  249 bits (636), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 113/211 (53%), Positives = 164/211 (77%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G  + K+  
Sbjct: 1   MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPMR  F++  +SPK KL EFR+  +++ + + +     +FT GQ VD+T  TIGKGF
Sbjct: 61  VTKPMRQVFANAKISPKTKLKEFRIS-EENFIDIAASLEVDHFTAGQFVDITATTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ 
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNKVTIQNLKIF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +VD +R LI+++G +PG  KNS++ V+D+ K
Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIK 209


>gi|254418121|ref|ZP_05031845.1| ribosomal protein L3 [Brevundimonas sp. BAL3]
 gi|196184298|gb|EDX79274.1| ribosomal protein L3 [Brevundimonas sp. BAL3]
          Length = 249

 Score =  249 bits (636), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 126/213 (59%), Positives = 153/213 (71%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+KLGMT V+  +G  +PVTVL LD CQVV  RT +++GY+A+Q+GAG  K KN
Sbjct: 1   MRTGVIAKKLGMTRVFADDGAHVPVTVLQLDGCQVVGQRTQERDGYVALQLGAGTKKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +K  R  F+   V PK  + EFRV  +  LL VG+  S  +F VGQ VD+ G TIGKGF
Sbjct: 61  TNKAQRETFAKAEVEPKAYVTEFRVDAEG-LLDVGAELSAEHFVVGQKVDIQGETIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F  KKMAG  G   VT +NL VV
Sbjct: 120 AGAMKRWNFGGLRATHGVSLSHRSHGSTGNRQDPGRTFPGKKMAGHYGAETVTTQNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            VD +RGLIL+KG VPG    S++ VRD+ K A
Sbjct: 180 RVDAERGLILIKGAVPG-HDGSYVKVRDAIKKA 211


>gi|197104696|ref|YP_002130073.1| 50S ribosomal protein L3 [Phenylobacterium zucineum HLK1]
 gi|226730544|sp|B4R8L7|RL3_PHEZH RecName: Full=50S ribosomal protein L3
 gi|196478116|gb|ACG77644.1| 50S ribosomal protein L3 [Phenylobacterium zucineum HLK1]
          Length = 261

 Score =  249 bits (636), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 125/216 (57%), Positives = 158/216 (73%), Gaps = 2/216 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+KLGM   ++  G  +PVTVL L+ CQVV HRT DK+GY+A+Q+GAG  K KN
Sbjct: 1   MRTGVIAKKLGMARFFDEAGVHVPVTVLSLEGCQVVAHRTKDKDGYVALQLGAGSKKPKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK +RG F+   V PK KL EF+V  +D+L+ VG+  +  +F  GQ VD+TG T+GKGF
Sbjct: 61  TSKGLRGHFAKGQVEPKAKLVEFKVS-EDNLIDVGAELTADHFVPGQKVDITGTTVGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F  KKMAG  G   VT  NL V 
Sbjct: 120 AGAMKRWNFGGLRATHGVSVSHRSHGSTGQRQDPGRTFPGKKMAGHYGQETVTTLNLTVW 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            VD +RGLILVKG VPG  + +++ +RD+ K+A+  
Sbjct: 180 RVDAERGLILVKGAVPGT-EGTFVKIRDAVKAALPA 214


>gi|157828860|ref|YP_001495102.1| 50S ribosomal protein L3 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933587|ref|YP_001650376.1| 50S ribosomal protein L3 [Rickettsia rickettsii str. Iowa]
 gi|238650972|ref|YP_002916828.1| 50S ribosomal protein L3 [Rickettsia peacockii str. Rustic]
 gi|166234587|sp|A8GT69|RL3_RICRS RecName: Full=50S ribosomal protein L3
 gi|189029476|sp|B0BUR0|RL3_RICRO RecName: Full=50S ribosomal protein L3
 gi|259709734|sp|C4K2H9|RL3_RICPU RecName: Full=50S ribosomal protein L3
 gi|157801341|gb|ABV76594.1| 50S ribosomal protein L3 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908674|gb|ABY72970.1| LSU ribosomal protein L3P [Rickettsia rickettsii str. Iowa]
 gi|238625070|gb|ACR47776.1| 50S ribosomal protein L3 [Rickettsia peacockii str. Rustic]
          Length = 215

 Score =  249 bits (636), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 113/211 (53%), Positives = 164/211 (77%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G  + K+  
Sbjct: 1   MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPMR  F++  +SPK KL EFR+  +++ + + +     +FT GQ VD+T  TIGKGF
Sbjct: 61  VTKPMRQVFANAKISPKTKLKEFRIS-EENFIDIAASLEVDHFTAGQFVDITATTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ 
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +VD +R LI+++G +PG  KNS++ V+D+ K
Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIK 209


>gi|209884813|ref|YP_002288670.1| ribosomal protein L3 [Oligotropha carboxidovorans OM5]
 gi|226730542|sp|B6JET3|RL3_OLICO RecName: Full=50S ribosomal protein L3
 gi|209873009|gb|ACI92805.1| ribosomal protein L3 [Oligotropha carboxidovorans OM5]
          Length = 243

 Score =  249 bits (635), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 127/211 (60%), Positives = 154/211 (72%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GM  V+   G  IPVTVL L NCQVV HRT DKNGY A+Q+GAG  K   
Sbjct: 1   MRSGVIAQKVGMMRVFTEAGEHIPVTVLKLGNCQVVGHRTKDKNGYTALQLGAGARKSVY 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + K  RG F+   V PK+K+ EFRV  +D ++PVG+     +F VGQ VDVTG +IGKG+
Sbjct: 61  MPKAERGQFAVAKVEPKRKVAEFRVS-EDAIIPVGAEIQADHFVVGQFVDVTGTSIGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T  NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +RGL+LV+G VPG+ K  WI VRD+ K
Sbjct: 180 QTDVERGLLLVEGAVPGS-KGGWITVRDAVK 209


>gi|258542027|ref|YP_003187460.1| 50S ribosomal protein L3 [Acetobacter pasteurianus IFO 3283-01]
 gi|256633105|dbj|BAH99080.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-01]
 gi|256636162|dbj|BAI02131.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-03]
 gi|256639217|dbj|BAI05179.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-07]
 gi|256642271|dbj|BAI08226.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-22]
 gi|256645326|dbj|BAI11274.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-26]
 gi|256648381|dbj|BAI14322.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-32]
 gi|256651434|dbj|BAI17368.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654425|dbj|BAI20352.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-12]
          Length = 227

 Score =  249 bits (635), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 128/213 (60%), Positives = 164/213 (76%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+KLGM+ ++  +G  +PVTVLH+D+ QVV  R  +++GY+AVQ+G G+AKVKN
Sbjct: 1   MRTGLIAKKLGMSRLFKEDGTHVPVTVLHVDDVQVVDVRNQERDGYVAVQLGMGKAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP RG F+   V PK+ L EFRV  DD  L VG+  S S+F VGQ VDVTG++ GKGF
Sbjct: 61  VTKPNRGHFARTKVEPKQALREFRVA-DDAALEVGATLSASHFVVGQKVDVTGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NF GL ATHGVSISHRSHGSTG RQDPG+ FKNKKMAG +G  RVT  NLE+ 
Sbjct: 120 AGAMKRWNFAGLEATHGVSISHRSHGSTGNRQDPGKTFKNKKMAGHLGDERVTTLNLEIA 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           +VD ++ LI+V+G VPGA KN  +L+RD+ K A
Sbjct: 180 AVDPEKNLIMVRGSVPGA-KNGVVLIRDAIKKA 211


>gi|34581369|ref|ZP_00142849.1| 50S ribosomal protein L3 [Rickettsia sibirica 246]
 gi|28262754|gb|EAA26258.1| 50S ribosomal protein L3 [Rickettsia sibirica 246]
          Length = 215

 Score =  248 bits (632), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 113/211 (53%), Positives = 163/211 (77%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G  + K+  
Sbjct: 1   MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPMR  F++  +SPK KL EFR+  ++  + + +     +FT GQ VD+T  TIGKGF
Sbjct: 61  VTKPMRQVFANAKISPKTKLKEFRISAEN-FIDIAASLEVDHFTAGQFVDITATTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ 
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +VD +R LI+++G +PG  KNS++ V+D+ K
Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIK 209


>gi|27380511|ref|NP_772040.1| 50S ribosomal protein L3 [Bradyrhizobium japonicum USDA 110]
 gi|42559627|sp|Q89J84|RL3_BRAJA RecName: Full=50S ribosomal protein L3
 gi|27353675|dbj|BAC50665.1| 50S ribosomal protein L3 [Bradyrhizobium japonicum USDA 110]
          Length = 238

 Score =  247 bits (630), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 126/214 (58%), Positives = 157/214 (73%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  IPVTVL L NCQVV HRT +KNGY+A+Q+G+G  K   
Sbjct: 1   MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLGNCQVVGHRTEEKNGYVALQLGSGSRKTVY 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + K  RG F+   V PK+++ EFRV  D  ++PVG+     +F VGQ VDVTG ++GKGF
Sbjct: 61  MPKAERGQFAVAKVEPKRRVEEFRVTADA-MIPVGAEIQADHFVVGQFVDVTGTSVGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ +KNKKM G MG +R+T  NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTWKNKKMPGHMGVDRITTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            +D +RGLILV+G VPG+ K  WI VRD+ K  +
Sbjct: 180 QLDVERGLILVEGAVPGS-KGGWIRVRDAVKKPL 212


>gi|329889129|ref|ZP_08267472.1| 50S ribosomal protein L3 [Brevundimonas diminuta ATCC 11568]
 gi|328844430|gb|EGF93994.1| 50S ribosomal protein L3 [Brevundimonas diminuta ATCC 11568]
          Length = 247

 Score =  247 bits (630), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 124/213 (58%), Positives = 155/213 (72%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+KLGMT V+  +G  +PVTVL LD CQVV  RT +++GY+A+Q+GAG  K KN
Sbjct: 1   MRTGVIAKKLGMTRVFADDGAHVPVTVLQLDGCQVVGQRTKERDGYVALQLGAGVKKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +K  R  F+   V PK  + EFRV  +D LL VG+  S  +F  GQ VD+ G TIGKGF
Sbjct: 61  TAKAQREVFAKAEVEPKAYVTEFRV-GEDALLDVGAELSADHFLAGQKVDIQGHTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRA+HGVSISHRSHGSTG RQDPG+VFK KKMAG +G   VT +NL VV
Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHLGQEVVTTQNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            VD +RGLIL+KG VPG    +++ + D+ K A
Sbjct: 180 RVDAERGLILIKGAVPG-HDGAYVKISDAIKKA 211


>gi|157804035|ref|YP_001492584.1| 50S ribosomal protein L3 [Rickettsia canadensis str. McKiel]
 gi|166234586|sp|A8EZL6|RL3_RICCK RecName: Full=50S ribosomal protein L3
 gi|157785298|gb|ABV73799.1| 50S ribosomal protein L3 [Rickettsia canadensis str. McKiel]
          Length = 215

 Score =  245 bits (626), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 111/211 (52%), Positives = 163/211 (77%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G  + K+  
Sbjct: 1   MRTGIIAQKIGMTSVFNDKGERIALTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+  F++  +SPK KL EFR+  +++ + V +     +F  GQ VD+T +TIGKGF
Sbjct: 61  VTKPMKQVFANAKISPKTKLKEFRIS-EENFIDVAASLEVDHFMAGQFVDITAITIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ 
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +VD  R LI+++G +PG  KNS++ ++D+ K
Sbjct: 180 AVDKDRKLIMIQGSIPG-HKNSYLSIKDAIK 209


>gi|157964806|ref|YP_001499630.1| 50S ribosomal protein L3 [Rickettsia massiliae MTU5]
 gi|166990939|sp|A8F2E7|RL3_RICM5 RecName: Full=50S ribosomal protein L3
 gi|157844582|gb|ABV85083.1| 50S ribosomal protein L3 [Rickettsia massiliae MTU5]
          Length = 215

 Score =  245 bits (626), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 111/211 (52%), Positives = 163/211 (77%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G  + K+  
Sbjct: 1   MRTGIIAQKVGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+  F++  +SPK KL EFR+  ++  + + +     +FT GQ VD+T  TIGKGF
Sbjct: 61  VTKPMKQVFANAKISPKTKLKEFRIS-EEHFIDIATSLEVDHFTAGQFVDITATTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VF+ KKMAG MG N+VT++NL++ 
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFRGKKMAGHMGCNQVTIQNLKIF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +VD +R LI+++G +PG  KNS++ V+D+ K
Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIK 209


>gi|157826063|ref|YP_001493783.1| 50S ribosomal protein L3 [Rickettsia akari str. Hartford]
 gi|166234584|sp|A8GPF0|RL3_RICAH RecName: Full=50S ribosomal protein L3
 gi|157800021|gb|ABV75275.1| 50S ribosomal protein L3 [Rickettsia akari str. Hartford]
          Length = 215

 Score =  244 bits (623), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 111/211 (52%), Positives = 163/211 (77%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+K+GMT V+N +G RIP+T++ +D+CQVV H+TL+K+GY A+ +G  + K+  
Sbjct: 1   MRTGIIAQKIGMTSVFNDKGERIPLTLVKVDDCQVVGHKTLEKHGYNALVIGIKDKKISR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+  F++  +SPK KL EFR+  + + + + +     +F  GQ VD+T  TIGKGF
Sbjct: 61  VTKPMKQVFANAKISPKTKLKEFRIS-EGNFIDIAANLEVDHFMAGQFVDITATTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ 
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +VD +R LI+++G +PG  KNS++ ++D+ K
Sbjct: 180 AVDRERKLIMIRGSIPG-HKNSYLSIKDAVK 209


>gi|329850207|ref|ZP_08265052.1| 50S ribosomal protein L3 [Asticcacaulis biprosthecum C19]
 gi|328840522|gb|EGF90093.1| 50S ribosomal protein L3 [Asticcacaulis biprosthecum C19]
          Length = 242

 Score =  244 bits (622), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 121/214 (56%), Positives = 154/214 (71%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+KLGMT  ++ EG  +PVTVL LD CQVV  RT  K+GY+A+Q+GAG  K KN
Sbjct: 1   MRTGLIAKKLGMTRFFDSEGLHVPVTVLALDGCQVVAQRTQGKDGYVALQLGAGTKKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S P R  F+   V PK  L EFRV  +++L+ VG+ F+  +F  GQ VD+ G+TIGKGF
Sbjct: 61  TSNPERVRFAKAQVEPKAILTEFRVS-EENLIDVGAEFTADHFVEGQRVDIQGVTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F  KKMAG  G   VT  NL V 
Sbjct: 120 AGAMKRWNFGGLRATHGVSVSHRSHGSTGQRQDPGRTFPGKKMAGHYGVETVTTLNLTVA 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            +D +RGL+ ++G VPGA + S++ +RD+ K A 
Sbjct: 180 RIDAERGLVFIRGAVPGA-EGSYVKIRDAVKKAA 212


>gi|91205877|ref|YP_538232.1| 50S ribosomal protein L3 [Rickettsia bellii RML369-C]
 gi|157826764|ref|YP_001495828.1| 50S ribosomal protein L3 [Rickettsia bellii OSU 85-389]
 gi|109893551|sp|Q1RHM1|RL3_RICBR RecName: Full=50S ribosomal protein L3
 gi|166234585|sp|A8GVB4|RL3_RICB8 RecName: Full=50S ribosomal protein L3
 gi|91069421|gb|ABE05143.1| 50S ribosomal protein L3 [Rickettsia bellii RML369-C]
 gi|157802068|gb|ABV78791.1| 50S ribosomal protein L3 [Rickettsia bellii OSU 85-389]
          Length = 215

 Score =  243 bits (621), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 109/211 (51%), Positives = 163/211 (77%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+K+GMT V+N  G+R+P+T++ +D+CQVV H+  +K+GY A+ +G  + K+  
Sbjct: 1   MRTGIIAQKVGMTSVFNNNGKRVPLTLVKVDDCQVVGHKIAEKHGYNALVIGIKDKKISR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+  F++  VSPK KL EFR+  +D+ + + +     +FT GQ +DVT  TIGKGF
Sbjct: 61  VTKPMKQVFANAKVSPKTKLKEFRIS-EDNFIDIAASLEVDHFTAGQFIDVTATTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG ++VT++NL++ 
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCSQVTIQNLKIF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           ++D ++GLI+++G +PG  K S+I ++D+ K
Sbjct: 180 AIDKEQGLIMIQGSIPG-HKGSYISIKDAIK 209


>gi|83949796|ref|ZP_00958529.1| Ribosomal protein L3 [Roseovarius nubinhibens ISM]
 gi|83837695|gb|EAP76991.1| Ribosomal  protein L3 [Roseovarius nubinhibens ISM]
          Length = 268

 Score =  242 bits (618), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 122/200 (61%), Positives = 148/200 (74%), Gaps = 2/200 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT ++  +G++IPVTVL LD  QVV  RT + +GY AVQ+GAG  K K VSK MRG FS 
Sbjct: 1   MTRLFMEDGKQIPVTVLQLDKLQVVAQRTPEAHGYSAVQLGAGSIKAKRVSKAMRGHFSI 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             V PK+K+ EFRV   ++L+ VG   +  ++  GQ VDV+G +IGKGF+GAMKRHNFGG
Sbjct: 61  AKVEPKRKIAEFRV-APENLINVGEEITADHYFEGQFVDVSGTSIGKGFAGAMKRHNFGG 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
           LRATHGVSISHRSHGSTG  QDPGRVFK KKMAG MG  RVT +NL+VV  D  RGLI+V
Sbjct: 120 LRATHGVSISHRSHGSTGQCQDPGRVFKGKKMAGHMGAARVTTQNLQVVKTDADRGLIMV 179

Query: 192 KGCVPGAKKNSWILVRDSFK 211
           KG VPG+ K  W+ V+D+ K
Sbjct: 180 KGAVPGS-KGGWVTVKDAVK 198


>gi|167645578|ref|YP_001683241.1| 50S ribosomal protein L3 [Caulobacter sp. K31]
 gi|189042835|sp|B0T2C2|RL3_CAUSK RecName: Full=50S ribosomal protein L3
 gi|167348008|gb|ABZ70743.1| ribosomal protein L3 [Caulobacter sp. K31]
          Length = 256

 Score =  241 bits (616), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 120/213 (56%), Positives = 155/213 (72%), Gaps = 2/213 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GV+A+KLGMT  ++  G+ +PVTVL LD CQV   RT++K+GY A+Q+GAG  K KN 
Sbjct: 7   RTGVIAKKLGMTRFFDETGQHVPVTVLSLDGCQVTAQRTVEKDGYTALQLGAGAKKPKNT 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
              MRG F+  +V PK+ + EFRV  +  L+ VG+ F+  ++  GQ VD+ G+T+GKGF+
Sbjct: 67  PNAMRGHFAKNSVEPKRIVAEFRVD-EAALIEVGAEFTADHYVAGQKVDIQGITVGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           GAMKR NF GLRATHGVS+SHRSHGSTG RQDPGR FK KKMAG +G   VT  N+ V  
Sbjct: 126 GAMKRWNFSGLRATHGVSVSHRSHGSTGQRQDPGRTFKGKKMAGHLGQETVTTLNVTVWK 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           VD +RGLILVKG VPG+ + S++ VRD+ K A 
Sbjct: 186 VDVERGLILVKGAVPGS-EGSYVKVRDAIKKAA 217


>gi|295688906|ref|YP_003592599.1| 50S ribosomal protein L3 [Caulobacter segnis ATCC 21756]
 gi|295430809|gb|ADG09981.1| 50S ribosomal protein L3 [Caulobacter segnis ATCC 21756]
          Length = 254

 Score =  241 bits (616), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 121/214 (56%), Positives = 157/214 (73%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
            R+GV+A+KLGMT  ++  G+ +PVTVL LD CQV   RT++K+GY A+Q+GAG  K KN
Sbjct: 6   QRTGVLAKKLGMTRFFDEAGQHVPVTVLSLDGCQVTGVRTVEKDGYTALQLGAGAKKAKN 65

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK +RG F+   V PK+ + EFRV+ ++ L+ VG+  +  +F  GQ VD+ G+T+GKGF
Sbjct: 66  TSKALRGHFAKAAVEPKRVVAEFRVE-ENALIEVGAELTADHFVAGQKVDIQGVTVGKGF 124

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F  KKMAG +G   VT  N+ V 
Sbjct: 125 AGAMKRWNFGGLRATHGVSVSHRSHGSTGNRQDPGRTFPGKKMAGHLGQETVTTLNVTVW 184

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            VD +RGLILVKG VPG  + S++ VRD+ K A+
Sbjct: 185 KVDVERGLILVKGAVPG-HEGSYVKVRDAVKKAL 217


>gi|161485649|ref|NP_420061.2| 50S ribosomal protein L3 [Caulobacter crescentus CB15]
 gi|42559686|sp|Q9A8V3|RL3_CAUCR RecName: Full=50S ribosomal protein L3
          Length = 255

 Score =  241 bits (615), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 121/214 (56%), Positives = 156/214 (72%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
            R+GV+A+KLGMT  ++  G+ +PVTVL LD CQV   RT++K+GY A+Q+GAG  K KN
Sbjct: 6   QRTGVIAKKLGMTRFFDEAGQHVPVTVLSLDGCQVTGVRTVEKDGYTALQLGAGAKKAKN 65

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S  MRG F+   V PK+ + EFRV+ ++ L+ VG+  +  +F  GQ VD+ G+T+GKGF
Sbjct: 66  TSNAMRGHFAKAAVEPKRVVAEFRVE-ENALIEVGAELTADHFVAGQKVDIQGVTVGKGF 124

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F  KKMAG +G   VT  N+ V 
Sbjct: 125 AGAMKRWNFGGLRATHGVSVSHRSHGSTGNRQDPGRTFPGKKMAGHLGQETVTTLNVTVW 184

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            VD +RGLILVKG VPG  + S++ VRD+ K A+
Sbjct: 185 KVDVERGLILVKGAVPG-HEGSYVKVRDAVKKAL 217


>gi|221234243|ref|YP_002516679.1| 50S ribosomal protein L3 [Caulobacter crescentus NA1000]
 gi|13422579|gb|AAK23229.1| ribosomal protein L3 [Caulobacter crescentus CB15]
 gi|220963415|gb|ACL94771.1| LSU ribosomal protein L3P [Caulobacter crescentus NA1000]
          Length = 267

 Score =  241 bits (614), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 121/214 (56%), Positives = 156/214 (72%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
            R+GV+A+KLGMT  ++  G+ +PVTVL LD CQV   RT++K+GY A+Q+GAG  K KN
Sbjct: 18  QRTGVIAKKLGMTRFFDEAGQHVPVTVLSLDGCQVTGVRTVEKDGYTALQLGAGAKKAKN 77

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S  MRG F+   V PK+ + EFRV+ ++ L+ VG+  +  +F  GQ VD+ G+T+GKGF
Sbjct: 78  TSNAMRGHFAKAAVEPKRVVAEFRVE-ENALIEVGAELTADHFVAGQKVDIQGVTVGKGF 136

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F  KKMAG +G   VT  N+ V 
Sbjct: 137 AGAMKRWNFGGLRATHGVSVSHRSHGSTGNRQDPGRTFPGKKMAGHLGQETVTTLNVTVW 196

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            VD +RGLILVKG VPG  + S++ VRD+ K A+
Sbjct: 197 KVDVERGLILVKGAVPG-HEGSYVKVRDAVKKAL 229


>gi|84515208|ref|ZP_01002571.1| 50S ribosomal protein L3 [Loktanella vestfoldensis SKA53]
 gi|84511367|gb|EAQ07821.1| 50S ribosomal protein L3 [Loktanella vestfoldensis SKA53]
          Length = 272

 Score =  240 bits (613), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 115/200 (57%), Positives = 154/200 (77%), Gaps = 2/200 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT ++  +GR++PVTVL L+N QVV  RT++K+GY+AVQ+GAG AK K  S+ MRG F++
Sbjct: 1   MTRLFMEDGRQVPVTVLALENLQVVAQRTVEKDGYVAVQLGAGAAKAKRTSQAMRGHFAA 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             V PK+K+ EFRV  ++ ++ VG   + +++  GQ VDV+G +IGKGF+GAMKRHNFGG
Sbjct: 61  AKVEPKRKVAEFRVAPEN-MINVGETITANHYFEGQYVDVSGTSIGKGFAGAMKRHNFGG 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
           LRA+HGVS+SHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NL+VV  D  RGLI+V
Sbjct: 120 LRASHGVSVSHRSHGSTGQCQDPGKVFKGKKMAGHMGSARVTTQNLQVVRTDADRGLIMV 179

Query: 192 KGCVPGAKKNSWILVRDSFK 211
           KG VPG+ +  W+ ++D+ K
Sbjct: 180 KGAVPGS-RGGWVTLKDAVK 198


>gi|297717842|gb|ADI50064.1| LSU ribosomal protein L3p [Candidatus Odyssella thessalonicensis
           L13]
          Length = 213

 Score =  237 bits (605), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 115/215 (53%), Positives = 155/215 (72%), Gaps = 3/215 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVK 59
           MR+G++A K+GMT  +  +G  +PVTVL + +C VV  +T D K+GY AVQ+G+ +AK+ 
Sbjct: 1   MRTGLIAEKVGMTQFFAADGTLVPVTVLQVSDCVVVGKKTADSKDGYNAVQIGSNKAKIN 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV+KPMR FF+   + P+  L EFRV  ++ L P G+     +F  GQ VDVTG +IGKG
Sbjct: 61  NVTKPMREFFAKKEIEPRAHLKEFRVSSENLLEP-GAELKADHFAAGQFVDVTGTSIGKG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+GAMKRHNFGGLRA+HGVS++HRSHGSTG RQDPG+VFKNKKMAG MG  RVT  NL +
Sbjct: 120 FAGAMKRHNFGGLRASHGVSVTHRSHGSTGNRQDPGKVFKNKKMAGHMGARRVTKMNLTI 179

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
             +D ++ LI ++G VPG+ +   + VRD+ K + 
Sbjct: 180 YGIDAEKNLIFIRGSVPGS-QGGIVYVRDAIKKSA 213


>gi|114797091|ref|YP_761529.1| 50S ribosomal protein L3 [Hyphomonas neptunium ATCC 15444]
 gi|123322946|sp|Q0BYB4|RL3_HYPNA RecName: Full=50S ribosomal protein L3
 gi|114737265|gb|ABI75390.1| ribosomal protein L3 [Hyphomonas neptunium ATCC 15444]
          Length = 252

 Score =  236 bits (603), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 126/227 (55%), Positives = 158/227 (69%), Gaps = 17/227 (7%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK--------------NGYM 47
           R+GV+ARK+GMT ++  +GR +PVTVL LD CQVV  R+ ++              +GY 
Sbjct: 7   RTGVLARKVGMTRIFAADGRHVPVTVLSLDGCQVVGVRSEEERSVTTKKGGQVTRTDGYK 66

Query: 48  AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
           AV +G+G+ K KN +K +RG F+   V+PK KL EFRV    DL  VGS     +F  GQ
Sbjct: 67  AVIMGSGDKKAKNTTKALRGQFAKAGVAPKAKLKEFRVS--GDLPEVGSTVQADHFAEGQ 124

Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
           LVDV+ M+IGKGF+GAMKR NF GLRA+HGVSISHR+HGSTG  QDPGRVFKNKKMAG +
Sbjct: 125 LVDVSAMSIGKGFAGAMKRWNFSGLRASHGVSISHRAHGSTGMNQDPGRVFKNKKMAGHL 184

Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           G  RVT +NL VV  D +RGLILVKG VPG    +++ VRD+ K A+
Sbjct: 185 GDERVTTQNLVVVRTDVERGLILVKGSVPG-HDGTFVEVRDAVKKAL 230


>gi|218463388|ref|ZP_03503479.1| 50S ribosomal protein L3 [Rhizobium etli Kim 5]
          Length = 159

 Score =  228 bits (582), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 109/160 (68%), Positives = 128/160 (80%), Gaps = 1/160 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  +PVTVL +D CQVV  RT++KNGY AVQ+GAG+AKVKN
Sbjct: 1   MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMDGCQVVATRTVEKNGYTAVQLGAGQAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+  NV PK KL EFRV  +D+LL +G+     +F  GQLVDVTG TIGKGF
Sbjct: 61  TSKAMRGNFAVANVEPKAKLAEFRV-SEDNLLEIGTEIKAGHFAAGQLVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VF+ 
Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFQE 159


>gi|189183951|ref|YP_001937736.1| 50S ribosomal protein L3 [Orientia tsutsugamushi str. Ikeda]
 gi|189180722|dbj|BAG40502.1| 50S ribosomal protein L3 [Orientia tsutsugamushi str. Ikeda]
          Length = 227

 Score =  215 bits (548), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 109/210 (51%), Positives = 145/210 (69%), Gaps = 2/210 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           RSG++A KLGM+  ++  GR++ +T+L +D CQV+ H+ + K+GY AV +G        V
Sbjct: 16  RSGLIAEKLGMSSKFDENGRKVAITLLKVDVCQVLWHKLVSKDGYNAVILGYKNISPFKV 75

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KPMR  FS   + PK  + EF+V  +D +L + S+   SYF VGQ VDV G+TIGKGF+
Sbjct: 76  KKPMRSIFSRAKIEPKAVIKEFKVA-EDRMLEIASILDASYFRVGQYVDVRGITIGKGFA 134

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           GAMKRH F GL A+HGVSISHRSHGSTG R  PGR FKNKKMAG MG    T++NL+V S
Sbjct: 135 GAMKRHGFRGLEASHGVSISHRSHGSTGNRAYPGRTFKNKKMAGHMGVKFATIQNLKVDS 194

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           VD ++ L+++KG +PG K  S + + DS K
Sbjct: 195 VDLEKRLLVIKGSIPG-KSGSIVYITDSIK 223


>gi|91763160|ref|ZP_01265124.1| 50S ribosomal protein L3 [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717573|gb|EAS84224.1| 50S ribosomal protein L3 [Candidatus Pelagibacter ubique HTCC1002]
          Length = 236

 Score =  213 bits (542), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 108/208 (51%), Positives = 143/208 (68%), Gaps = 2/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
            +V +K+GMT  +   GR +PVTV+ ++  +V+     +K GY AVQ+G G+ K   ++K
Sbjct: 5   ALVGKKIGMTREFYKTGRLVPVTVIKMEKARVIQVIEEEKRGYKAVQLGFGKIKASKLTK 64

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
            M+GF++  N   KKKL EFRV KD +L   G+ F    F   + VD T  TIGKGF+GA
Sbjct: 65  AMKGFYAKKNTEAKKKLKEFRV-KDTELYKEGNEFGLEIFNEVKFVDTTSKTIGKGFAGA 123

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNFGGLRATHGVS+SHRSHGSTG RQDPG+VFK KKMAG MG    T++NLE++  D
Sbjct: 124 MKRHNFGGLRATHGVSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDRVRTMQNLEIIKTD 183

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +  L+ +KG +PG+ KN+ ILV+ S K
Sbjct: 184 IENELLYLKGSIPGS-KNTEILVKKSVK 210


>gi|148284214|ref|YP_001248304.1| 50S ribosomal protein L3 [Orientia tsutsugamushi str. Boryong]
 gi|146739653|emb|CAM79442.1| 50S ribosomal protein L3 [Orientia tsutsugamushi str. Boryong]
          Length = 229

 Score =  211 bits (537), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 107/210 (50%), Positives = 143/210 (68%), Gaps = 2/210 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           RSG++A KLGM+  ++  GR++ +T+L +D CQV+ H+ + K+GY AV +G        V
Sbjct: 18  RSGLIAEKLGMSSKFDESGRKVAITLLKVDVCQVLWHKLVSKDGYNAVILGYKNISPFKV 77

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KPM   FS   + PK  + EF+V  +D +L + S+   SYF VGQ VDV G+TIGKGF+
Sbjct: 78  KKPMHSIFSRAKIEPKAIIKEFKVA-EDKMLEIASILDASYFRVGQYVDVRGVTIGKGFA 136

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           GAMKRH F GL A+HGVSISHRSHGSTG R  PGR FKNKKMAG MG    T++NL V S
Sbjct: 137 GAMKRHGFRGLEASHGVSISHRSHGSTGNRAYPGRTFKNKKMAGHMGVRFATIQNLRVDS 196

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           VD ++ L++++G +PG K  S + + DS K
Sbjct: 197 VDLEKRLLVIQGSIPG-KSGSIVYITDSIK 225


>gi|71083804|ref|YP_266524.1| 50S ribosomal protein L3 [Candidatus Pelagibacter ubique HTCC1062]
 gi|109893535|sp|Q4FLL8|RL3_PELUB RecName: Full=50S ribosomal protein L3
 gi|71062917|gb|AAZ21920.1| 50S ribosomal protein L3 [Candidatus Pelagibacter ubique HTCC1062]
          Length = 236

 Score =  210 bits (535), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 106/208 (50%), Positives = 142/208 (68%), Gaps = 2/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
            ++ +K+GMT  +   GR +PVTV+ ++  +V+     +K GY AVQ+G G+ K   ++K
Sbjct: 5   ALIGKKIGMTREFYKTGRLVPVTVIKMEKARVIQVIEEEKRGYKAVQLGFGKIKASKLTK 64

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
            M+G ++  N   KKKL EFRV KD +L   G+ F    F   + VD T  TIGKGF+GA
Sbjct: 65  AMKGLYAKKNTEAKKKLKEFRV-KDTELYKEGNEFGLEIFNEVKFVDTTSKTIGKGFAGA 123

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNFGGLRATHGVS+SHRSHGSTG RQDPG+VFK KKMAG MG    T++NLE++  D
Sbjct: 124 MKRHNFGGLRATHGVSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDRVRTMQNLEIIKTD 183

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +  L+ +KG +PG+ KN+ ILV+ S K
Sbjct: 184 IENELLYLKGSIPGS-KNTEILVKKSVK 210


>gi|302769378|ref|XP_002968108.1| hypothetical protein SELMODRAFT_145395 [Selaginella moellendorffii]
 gi|300163752|gb|EFJ30362.1| hypothetical protein SELMODRAFT_145395 [Selaginella moellendorffii]
          Length = 255

 Score =  209 bits (533), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 110/209 (52%), Positives = 147/209 (70%), Gaps = 2/209 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K GMT V++  GRRIP+TVL  D+ QVV  +T+D  G+ A+QVG G+ K K +
Sbjct: 7   RTGLIAVKCGMTAVWDKWGRRIPITVLWADDNQVVQVKTVDHEGFNALQVGCGQKKPKQL 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           S P  G F S  V  K+KL EF+V  +D LLPVG+  +  +F  GQ +DVTG++IGKGF 
Sbjct: 67  SIPELGHFRSKGVPIKRKLKEFQVS-EDALLPVGTALTVRHFVPGQFLDVTGVSIGKGFQ 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR  F G+ A+HG S+SHRSHG+TG R+ PG+VFKNKKMAG+MG  + TV  + V  
Sbjct: 126 GPMKRWGFAGMPASHGASLSHRSHGATGGRKSPGKVFKNKKMAGQMGNRKATVFCVWVYK 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           V+ +R LI VKG VPG K N ++ +RDS+
Sbjct: 186 VEPQRDLIWVKGQVPGCKGN-FVYIRDSW 213


>gi|302773854|ref|XP_002970344.1| hypothetical protein SELMODRAFT_267426 [Selaginella moellendorffii]
 gi|300161860|gb|EFJ28474.1| hypothetical protein SELMODRAFT_267426 [Selaginella moellendorffii]
          Length = 279

 Score =  209 bits (531), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 110/209 (52%), Positives = 147/209 (70%), Gaps = 2/209 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K GMT V++  GRRIP+TVL  D+ QVV  +T+D  G+ A+QVG G+ K K +
Sbjct: 28  RTGLIAVKCGMTAVWDKWGRRIPITVLWADDNQVVQVKTVDHEGFNALQVGCGQKKPKQL 87

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           S P  G F S  V  K+KL EF+V  +D LLPVG+  +  +F  GQ +DVTG++IGKGF 
Sbjct: 88  SIPELGHFRSKGVPIKRKLKEFQVS-EDALLPVGTPLTVRHFVPGQFLDVTGVSIGKGFQ 146

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR  F G+ A+HG S+SHRSHG+TG R+ PG+VFKNKKMAG+MG  + TV  + V  
Sbjct: 147 GPMKRWGFAGMPASHGASLSHRSHGATGGRKSPGKVFKNKKMAGQMGNRKATVFCVWVYK 206

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           V+ +R LI VKG VPG K N ++ +RDS+
Sbjct: 207 VEPQRDLIWVKGQVPGCKGN-FVYIRDSW 234


>gi|320582593|gb|EFW96810.1| Mitochondrial ribosomal protein of the large subunit [Pichia
           angusta DL-1]
          Length = 272

 Score =  209 bits (531), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 108/210 (51%), Positives = 140/210 (66%), Gaps = 2/210 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  K GMT  Y+  G R+P TVL +D  +VV ++T+DKNGY AVQVG G  K+KN 
Sbjct: 55  RPGLIGVKRGMTQFYSRNGDRVPATVLEIDQVEVVYNKTVDKNGYYAVQVGYGH-KLKNQ 113

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +K M G + +  VSPK+ LFEF V+ ++ L+PVGS     +F  GQ VDV   T GKGFS
Sbjct: 114 TKAMLGHYRNAKVSPKETLFEFEVKDENGLVPVGSQLKADHFKPGQFVDVISKTKGKGFS 173

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR NF GL ATHG S++HRS GSTG    P RV   KKMAG +G    T+ NLEV+ 
Sbjct: 174 GVMKRWNFSGLPATHGTSLAHRSAGSTGMNTTPARVLPGKKMAGHLGDEWNTIFNLEVLD 233

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V+ ++G ILVKGCV G+   S++ +RD+ K
Sbjct: 234 VNAEKGYILVKGCVSGS-NGSYVQIRDALK 262


>gi|196019520|ref|XP_002118992.1| hypothetical protein TRIADDRAFT_35046 [Trichoplax adhaerens]
 gi|190577417|gb|EDV18523.1| hypothetical protein TRIADDRAFT_35046 [Trichoplax adhaerens]
          Length = 217

 Score =  207 bits (528), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 104/213 (48%), Positives = 150/213 (70%), Gaps = 2/213 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A+K+GMT ++   G  IPVT++ +D   V+  +T +KNGY  VQ+ A + K + +
Sbjct: 5   RTGLIAKKVGMTQIFKENGEVIPVTMILVDENIVLSVKTKEKNGYNGVQLAAFDQKPQRL 64

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SK ++G F    +S KKK+ EF V  +++LL VG     ++F   Q VD+TG++IGKG++
Sbjct: 65  SKSVKGSFEKAKISAKKKMKEFIVH-ENNLLKVGDKVDVNHFKKNQYVDITGISIGKGYA 123

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF GL ATHGVSISHRS GSTG  QDPGRVFK KKMAG+MG  +VT +N++V+ 
Sbjct: 124 GTMKRHNFKGLEATHGVSISHRSAGSTGQCQDPGRVFKGKKMAGQMGNKKVTTQNIKVID 183

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           +D +  L++VKG VPG   N ++ ++D+ K AV
Sbjct: 184 IDSELNLLIVKGAVPGC-NNGYLYIKDAIKKAV 215


>gi|254569692|ref|XP_002491956.1| Mitochondrial ribosomal protein of the large subunit [Pichia
           pastoris GS115]
 gi|238031753|emb|CAY69676.1| Mitochondrial ribosomal protein of the large subunit [Pichia
           pastoris GS115]
 gi|328351549|emb|CCA37948.1| 50S ribosomal protein L3 [Pichia pastoris CBS 7435]
          Length = 262

 Score =  207 bits (527), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 107/210 (50%), Positives = 145/210 (69%), Gaps = 2/210 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  K GM   Y  EG RIP TVL +D  +V  ++T+  +GY AVQVG G  K+KN 
Sbjct: 52  RPGLIGVKRGMVPFYTNEGLRIPCTVLEIDQVEVTHNKTVANDGYSAVQVGYG-FKLKNQ 110

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +K M G F+   VSPK+K+ EF V+ DD LLPVG++    +F VG+ VD+  ++ GKGF+
Sbjct: 111 TKKMLGHFAKAQVSPKEKVVEFHVKSDDGLLPVGTLLKADHFKVGEFVDLQSISKGKGFA 170

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR NF GL+A+HGVS +HRS GSTG  Q PGR    KKMAGRMGG+ VT++N+EVV 
Sbjct: 171 GVMKRWNFHGLKASHGVSKAHRSAGSTGGNQTPGRTLPGKKMAGRMGGHNVTLQNVEVVD 230

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V+ ++G IL+KG V GA   S++ ++D+ K
Sbjct: 231 VNAEKGYILIKGPVSGA-TGSYVKIQDAIK 259


>gi|307106714|gb|EFN54959.1| hypothetical protein CHLNCDRAFT_48876 [Chlorella variabilis]
          Length = 234

 Score =  207 bits (527), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 108/204 (52%), Positives = 139/204 (68%), Gaps = 2/204 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT  ++  G R+P+TVL +D+CQVV  +T DK GY A+Q+G+G  + K +   +RG F +
Sbjct: 1   MTQEWDAWGVRVPLTVLWVDDCQVVQVKTDDKEGYTALQLGSGSKRPKQLRGTLRGHFDA 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             V+PK++L EFRV  D  LLPVG     S+F  GQ VDVTG +IGKGF G MKR  F G
Sbjct: 61  AGVAPKRRLAEFRVSPDA-LLPVGHELRASHFVAGQFVDVTGTSIGKGFQGVMKRWGFAG 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
             A+HG S++HR+ GSTG  QDPG+VFK KKM GRMGG RVTV+N +V  VD  R L+ V
Sbjct: 120 QPASHGNSLAHRAAGSTGACQDPGKVFKGKKMPGRMGGERVTVQNNQVFRVDPLRNLLYV 179

Query: 192 KGCVPGAKKNSWILVRDSFKSAVN 215
           +G VPG K N ++LVRDS K  + 
Sbjct: 180 RGHVPGHKGN-FVLVRDSAKKTLE 202


>gi|300120599|emb|CBK20153.2| unnamed protein product [Blastocystis hominis]
 gi|300176505|emb|CBK24170.2| unnamed protein product [Blastocystis hominis]
          Length = 250

 Score =  207 bits (526), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 106/196 (54%), Positives = 137/196 (69%), Gaps = 1/196 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GVVA K+GM  +++    RIP TVL ++NCQVV  +T +K    ++QVGAG  KVKNV
Sbjct: 7   RTGVVALKIGMMPLWDKWCTRIPCTVLQIENCQVVQVKTKEKENTNSLQVGAGPVKVKNV 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G + SV V PK+ L EF+V  +D  LPVG+  +  +F  GQ V++ G+T GKGF 
Sbjct: 67  NKPLFGHYKSVGVEPKRYLTEFKVT-EDAFLPVGTELTCKHFVPGQRVNIQGITQGKGFQ 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G M+R  F GL A+HGVS+SHRS GSTG R+DPG+ FK KKM GRMG    TV+NL V  
Sbjct: 126 GVMRRWGFKGLGASHGVSVSHRSLGSTGQREDPGKTFKGKKMPGRMGNKNCTVQNLLVYK 185

Query: 182 VDDKRGLILVKGCVPG 197
           +D KR L+ VKGCVPG
Sbjct: 186 IDPKRNLVYVKGCVPG 201


>gi|50285271|ref|XP_445064.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524367|emb|CAG57964.1| unnamed protein product [Candida glabrata]
          Length = 263

 Score =  205 bits (522), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 100/211 (47%), Positives = 145/211 (68%), Gaps = 2/211 (0%)

Query: 2   RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           R G V +K+GM   ++ + G RI  T+L  +N +V++HR LD++GY+A QVG G   V  
Sbjct: 50  RCGAVTQKVGMMPYFDEKTGERIAATILQFNNVEVLMHRRLDEDGYVACQVGYGNRSVDK 109

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS+ M G F+++NV+PK+K+ EFRV+ ++ LLP+G+   P +FT GQ +DV  ++ GKGF
Sbjct: 110 VSRQMLGHFATLNVNPKEKVTEFRVKNEEGLLPIGTHIKPDFFTEGQYLDVRSVSKGKGF 169

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNF GLRA+HG S+ HR  GS G  QDPGRV   KKM G MG   VTV+N++++
Sbjct: 170 AGVMKRHNFKGLRASHGTSVMHRHGGSYGQNQDPGRVLPGKKMPGHMGVQNVTVQNVKIL 229

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD+   +I VKG VPG    +++ ++D+ K
Sbjct: 230 KVDEANNVIWVKGAVPGP-NGTYVKIQDAIK 259


>gi|156848338|ref|XP_001647051.1| hypothetical protein Kpol_1050p50 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117734|gb|EDO19193.1| hypothetical protein Kpol_1050p50 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 271

 Score =  203 bits (516), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 103/212 (48%), Positives = 143/212 (67%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R GV+A+K GM   ++   G R   TVL L+N +V++HRTL  NGY A QVG G+    
Sbjct: 54  LRCGVIAQKKGMMPYFDENTGERTAATVLQLNNVEVLMHRTLKDNGYYACQVGFGDKDPS 113

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +VS+ M G F+S  V+PK+ + EFRV+ +  LLP+G++  PS+F  GQ VD+   + GKG
Sbjct: 114 HVSRQMLGHFASKIVNPKETVAEFRVKNESGLLPLGTLLKPSFFKPGQFVDLKSTSKGKG 173

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR +F GLRA+HG S+ HR  GS G  QDPGR+   KKM GRMGG  VT++N+++
Sbjct: 174 FQGVMKRFHFAGLRASHGTSVMHRHGGSFGQNQDPGRILPGKKMPGRMGGKNVTIQNVQI 233

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           + VDD+  +I+VKG V G  K S+I ++DS K
Sbjct: 234 LKVDDENNVIIVKGSVAGP-KGSYIKLQDSIK 264


>gi|254579248|ref|XP_002495610.1| ZYRO0B15444p [Zygosaccharomyces rouxii]
 gi|238938500|emb|CAR26677.1| ZYRO0B15444p [Zygosaccharomyces rouxii]
          Length = 273

 Score =  202 bits (514), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 99/214 (46%), Positives = 147/214 (68%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R G + +K GM   ++   G+R+  TVL +DN +V++HRT+++NGY A QVG G    +
Sbjct: 56  LRCGALTKKEGMMPFFDEATGKRVACTVLKMDNVEVLMHRTMEENGYFACQVGYGSKHPQ 115

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            VS+ M G F+S  V+PK+++ EFRV+ +D LLP+G++  PS+F  GQ VD+  +  GKG
Sbjct: 116 KVSRQMLGHFASKLVNPKERVSEFRVKNEDGLLPLGTLIKPSFFNNGQYVDLKSICKGKG 175

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MK+++F GLRA+HG SI HR  GS G  QDPGRV   KKM G MG + VT++N +V
Sbjct: 176 FAGVMKKYHFAGLRASHGTSIMHRHGGSYGQNQDPGRVLPGKKMPGHMGNHHVTIQNAQV 235

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           + VDD+ G+IL+KG V G    +++ ++D+ K A
Sbjct: 236 LKVDDELGVILIKGSVAGP-TGAFVKIQDAIKKA 268


>gi|310798524|gb|EFQ33417.1| 50S ribosomal protein L3 [Glomerella graminicola M1.001]
          Length = 347

 Score =  202 bits (513), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 104/212 (49%), Positives = 145/212 (68%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+GV+A K GMT VY  + +R+P TVL LD  QVV ++T  KNGY AVQ+GAG  + +N
Sbjct: 90  LRTGVLAIKKGMTAVYYGK-KRVPCTVLQLDQVQVVANKTRAKNGYWAVQIGAGSKEPRN 148

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V +P+ G++ +  ++PK+ L EF+V+ ++ LLPVGS   P +F  GQ VDV   + G GF
Sbjct: 149 VERPLLGYYEAKGIAPKRHLAEFKVRSEEGLLPVGSQLFPDWFQTGQYVDVRSNSRGMGF 208

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179
           +G MKRH F G  A+HG S++HR+ G+TG  Q  G RV   KKM GRMG  RVTV+NL V
Sbjct: 209 AGGMKRHGFAGQEASHGNSLNHRTIGTTGPSQGSGSRVLPGKKMPGRMGNERVTVQNLTV 268

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           + VD++ G++LVKG V G  KN  + ++D+ K
Sbjct: 269 LKVDNELGVVLVKGAV-GGPKNCIVQLQDAKK 299


>gi|168018029|ref|XP_001761549.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687233|gb|EDQ73617.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 258

 Score =  202 bits (513), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 103/210 (49%), Positives = 144/210 (68%), Gaps = 2/210 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
            R+GV+A K GMT +++  G R+P+TVL +++  VV  +T + +G+ A+Q+GAG+ K K 
Sbjct: 13  FRTGVIAVKCGMTAIWDKWGARVPMTVLWVNDNHVVQVKTEETDGHFALQIGAGQRKPKQ 72

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP  G F +  V  K+ L EF V  +D LLP+G+  S  +F  GQ VD+ G+T GKGF
Sbjct: 73  LTKPELGHFRAAGVPLKQHLAEFPVT-EDALLPLGTELSVRHFRPGQYVDIAGITTGKGF 131

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G MKR  F G+ A+HG S+SHRS GSTG RQDPG+VFK KKMAG MG  R TVKN+ + 
Sbjct: 132 QGGMKRWGFAGMPASHGASLSHRSLGSTGGRQDPGKVFKGKKMAGHMGAVRRTVKNVWIY 191

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
            ++ +R LI V+G VPG K N ++ +RD+F
Sbjct: 192 KIEPERDLIWVRGQVPGHKGN-FVYIRDAF 220


>gi|307136201|gb|ADN34039.1| 50S ribosomal protein l3 [Cucumis melo subsp. melo]
          Length = 328

 Score =  201 bits (511), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 105/214 (49%), Positives = 146/214 (68%), Gaps = 2/214 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GV+A K GM+ +++  G RIP+TVL +D+  V   +T++K G  A+Q+G G+ K K++
Sbjct: 79  RTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKEGITALQIGCGQKKEKHL 138

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SKP  G F +  V  K+KL EF V +D  LLPVG+     +F  GQ VDVTG++ GKGF 
Sbjct: 139 SKPELGHFRAQGVPLKRKLKEFPVSQDA-LLPVGTEIGARHFVPGQYVDVTGISRGKGFQ 197

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F G+ A+HG S+SHRS GSTG R  PG+VFK +KMAGRMGG + TVKN+ +  
Sbjct: 198 GVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGGKQRTVKNVWIYK 257

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           +D  R LI VKG +PGA + S++ ++D+    +N
Sbjct: 258 IDPARNLIWVKGPIPGA-EGSFVFIKDAMYKRLN 290


>gi|170088428|ref|XP_001875437.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164650637|gb|EDR14878.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 315

 Score =  201 bits (510), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 107/214 (50%), Positives = 137/214 (64%), Gaps = 5/214 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKN--GYMAVQVGAGEAK 57
           +R+GV+ARK GMT ++N +G R PVTVL L+NCQV  + R+  +N   Y A+QV A +  
Sbjct: 47  IRTGVIARKRGMTALWNDQGVRYPVTVLQLENCQVTANIRSTRRNHTEYHAIQVAASDKP 106

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
            K  +  M G F    V PK+ + EF +  D  + PVG+  S  +F  GQ VDV   +IG
Sbjct: 107 AKGTTNQMLGHFRKAAVPPKRIVREFPITPDAHI-PVGTTLSAVHFVPGQFVDVVANSIG 165

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF G MKR  F GL A+HGVS+SHRS GSTG  QDPGR+F  KKMAG MG  R+T +NL
Sbjct: 166 KGFQGGMKRWGFHGLAASHGVSVSHRSSGSTGQHQDPGRIFPGKKMAGHMGNKRITTQNL 225

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VV VD    LI V+G VPG   N+ +L+RD+ K
Sbjct: 226 AVVRVDTALDLIFVRGAVPGV-DNAHVLIRDAKK 258


>gi|50555650|ref|XP_505233.1| YALI0F10076p [Yarrowia lipolytica]
 gi|49651103|emb|CAG78040.1| YALI0F10076p [Yarrowia lipolytica]
          Length = 277

 Score =  201 bits (510), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 102/200 (51%), Positives = 137/200 (68%), Gaps = 2/200 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE--AKVK 59
           R+G +A K GM   Y+  G  +P TVL +D CQVV H+T +K+GY AVQVG G     ++
Sbjct: 48  RTGALAFKRGMISWYDENGVHMPATVLEIDLCQVVGHKTEEKHGYNAVQVGMGHRNKALQ 107

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++K   G FS+  V+PK+ + EFR++  D LLP+ +  + S+F VGQ VDV   + GKG
Sbjct: 108 KMNKSKLGQFSAATVNPKQAVAEFRIRGKDGLLPITTEITASHFKVGQYVDVQATSKGKG 167

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG MKRH F GL A+HGVS+ HRS G+TG   DPGRVF  +KMAG MG   VT+KN +V
Sbjct: 168 FSGVMKRHGFSGLPASHGVSLKHRSGGTTGQNTDPGRVFPGRKMAGNMGNETVTLKNQKV 227

Query: 180 VSVDDKRGLILVKGCVPGAK 199
           +SVD+  G+++VKG VPG+K
Sbjct: 228 LSVDEDTGIVIVKGMVPGSK 247


>gi|194689948|gb|ACF79058.1| unknown [Zea mays]
          Length = 254

 Score =  200 bits (509), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 104/208 (50%), Positives = 146/208 (70%), Gaps = 2/208 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GV+  K GM+ +++  G ++P+TVL +D+  V   +T +K G+ A+Q+GAG+ K K++
Sbjct: 7   RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVTQVKTAEKEGFFALQLGAGQKKEKHL 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F +  V  K+KL EF V  +D LLPVG+  +  +F  GQ VDVTG+T GKGF+
Sbjct: 67  TKPEVGHFRAQGVPLKRKLREFPVT-EDALLPVGTSITVRHFVPGQFVDVTGITKGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR+ FGG+ A+HG S++HRS GSTG R  PGRVFKN+KM GRMGG + TVKN+ V  
Sbjct: 126 GVMKRYGFGGMPASHGTSLAHRSGGSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +D  R L+ +KG VPG  + S+I V+DS
Sbjct: 186 IDPARNLLYLKGQVPGP-QGSFIFVKDS 212


>gi|229594830|ref|XP_001032401.3| ribosomal protein L3 containing protein [Tetrahymena thermophila]
 gi|225566556|gb|EAR84738.3| ribosomal protein L3 containing protein [Tetrahymena thermophila
           SB210]
          Length = 439

 Score =  200 bits (508), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 100/214 (46%), Positives = 144/214 (67%), Gaps = 2/214 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++  KLGMT +++  G+   +TV+ +D CQVV  +T +K+G  A+Q+G GE  +K +
Sbjct: 185 RTGILGYKLGMTSIWDKWGKLHALTVIQIDRCQVVQVKTEEKDGVNALQLGVGEKSLKRI 244

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G     ++ PK+ L EF+V   D  LP G + S  +F  GQ VD+ G+++GKGF+
Sbjct: 245 NKPTIGHLMKNDIPPKRHLKEFKV-SPDCFLPAGYMLSARHFVPGQYVDIQGISVGKGFA 303

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR NF    ATHG S+SHR+ GSTG RQDPGRVFKNKKMAG MG  +VT+ +L+V  
Sbjct: 304 GTVKRWNFKMQDATHGNSLSHRAPGSTGQRQDPGRVFKNKKMAGHMGCEKVTIMDLQVYK 363

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           +D +R L+ ++G VPG K  S + +RD+FK  V 
Sbjct: 364 IDVERSLVYIRGHVPG-KPGSLVQIRDAFKKQVQ 396


>gi|255556584|ref|XP_002519326.1| 50S ribosomal protein L3, putative [Ricinus communis]
 gi|223541641|gb|EEF43190.1| 50S ribosomal protein L3, putative [Ricinus communis]
          Length = 311

 Score =  199 bits (507), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 102/208 (49%), Positives = 143/208 (68%), Gaps = 2/208 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K GMT +++  G R+P+TVL +D+  V   +T++K G  A+Q+G G  K K++
Sbjct: 65  RTGIIALKCGMTALWDKWGERVPITVLWVDDNIVTQVKTVEKEGIFALQIGYGHKKAKHL 124

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F + NV  K+KL EF V  +D L+PVG+     +F  GQ VD+TG+T GKGF 
Sbjct: 125 TKPEVGHFRAHNVPLKRKLREFPVT-EDALIPVGTSLGVRHFVPGQFVDITGITRGKGFQ 183

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F G+ ATHG S+SHRS GSTG R  PG+VFK KKM GRMGG + TVKN+ V  
Sbjct: 184 GGMKRHGFKGMPATHGASLSHRSGGSTGQRDAPGKVFKGKKMPGRMGGVQRTVKNVWVYK 243

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +D  R ++ V+G VPGA+ N ++ ++D+
Sbjct: 244 IDPTRNMMWVRGQVPGAEGN-FVFIKDA 270


>gi|326490890|dbj|BAJ90112.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 313

 Score =  199 bits (507), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 105/208 (50%), Positives = 144/208 (69%), Gaps = 2/208 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GV+  K GM+ +++  G ++P+TVL +D+  V   +T +K G+ A+Q+GAG+ K K++
Sbjct: 66  RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVCQVKTAEKEGFYALQLGAGQKKEKHL 125

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F S  V  K+KL EF V  +D LLPVG+  S  +F  GQ VDV G+T GKGF+
Sbjct: 126 TKPEVGHFRSQGVPLKRKLKEFPVT-EDALLPVGTTISVRHFVPGQFVDVIGITKGKGFA 184

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F G+ A+HG S+SHRS GSTG R  PGRVFKN+KM GRMGG + TVKN+ V  
Sbjct: 185 GGMKRHGFSGMPASHGASLSHRSIGSTGQRDSPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 244

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +D  R L+ +KG VPG  + S++ V+DS
Sbjct: 245 IDPARNLLYLKGQVPGP-QGSFLFVKDS 271


>gi|50309329|ref|XP_454671.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49643806|emb|CAG99758.1| KLLA0E16039p [Kluyveromyces lactis]
          Length = 273

 Score =  199 bits (507), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 100/212 (47%), Positives = 146/212 (68%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R G +++K+GM   +  E G+RI  TVL LDN +V++HRT  +N Y A Q+G G    +
Sbjct: 58  LRCGALSKKVGMMPYFEKETGKRIAATVLQLDNNEVILHRTPAENNYWACQIGYGNKSPE 117

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV++ M G F++  V+PK+K+ EFRV+ +  LLPVGS+  PS+F  GQ VD+  ++ GKG
Sbjct: 118 NVTRQMLGHFAAHVVNPKEKVTEFRVKDESGLLPVGSLIKPSWFKPGQYVDLRSISKGKG 177

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR+ F GL+A+HGVS+SHRS GS G  Q PGRV   KKM G MG + VT++N++V
Sbjct: 178 FQGVMKRYGFKGLKASHGVSVSHRSGGSYGQNQTPGRVLPGKKMPGHMGVDTVTIQNVQV 237

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           + V+D+ G +LVKG V G    +++ ++D+ K
Sbjct: 238 LDVNDETGTVLVKGSVAGP-NGAFVKIQDAIK 268


>gi|281212110|gb|EFA86271.1| ribosomal protein L3 [Polysphondylium pallidum PN500]
          Length = 338

 Score =  199 bits (507), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 107/208 (51%), Positives = 141/208 (67%), Gaps = 3/208 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G + +K+GMT V+ ++   IPVTV+HL N QVV  +    +G  A+QVGA E ++KNV
Sbjct: 59  RVGAIGKKVGMTTVW-VDHVAIPVTVVHLPNNQVVQVKHKVNDGVDALQVGADEIRLKNV 117

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
              M+G F+  +V PK+ L EF V ++   LPVG+  +P +F  GQLV + G++ GKGF 
Sbjct: 118 KGTMKGHFAKADVPPKRILMEFPVTRNA-FLPVGTQITPRHFVPGQLVTIKGVSTGKGFQ 176

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR NF GL ATHGVS+SHRS GSTGCRQ PGRVFK KKM G +G    TV NL+V+ 
Sbjct: 177 GGMKRWNFSGLAATHGVSVSHRSIGSTGCRQTPGRVFKGKKMPGHLGSESTTVLNLQVIQ 236

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
            + + G I++KG VPG KK S+I + DS
Sbjct: 237 CNTELGTIMLKGAVPG-KKGSYIRIIDS 263


>gi|212274775|ref|NP_001130722.1| hypothetical protein LOC100191826 [Zea mays]
 gi|195627984|gb|ACG35822.1| 50S ribosomal protein L3-2 [Zea mays]
          Length = 318

 Score =  199 bits (507), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 104/208 (50%), Positives = 145/208 (69%), Gaps = 2/208 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GV+  K GM+ +++  G ++P+TVL +D+  V   +T +K G+ A+Q+GAG+ K K++
Sbjct: 71  RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVTQVKTAEKEGFFALQLGAGQKKEKHL 130

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F +  V  K+KL EF V  +D LLPVG+  +  +F  GQ VDVTG+T GKGF+
Sbjct: 131 TKPEVGHFRAQGVPLKRKLREFPVT-EDALLPVGTSITVRHFVPGQFVDVTGITKGKGFA 189

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR+ FGG  A+HG S++HRS GSTG R  PGRVFKN+KM GRMGG + TVKN+ V  
Sbjct: 190 GVMKRYGFGGXPASHGTSLAHRSGGSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 249

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +D  R L+ +KG VPG  + S+I V+DS
Sbjct: 250 IDPARNLLYLKGQVPGP-QGSFIFVKDS 276


>gi|242219427|ref|XP_002475493.1| mitochondrial 50S ribosomal protein L3 [Postia placenta Mad-698-R]
 gi|220725308|gb|EED79301.1| mitochondrial 50S ribosomal protein L3 [Postia placenta Mad-698-R]
          Length = 269

 Score =  199 bits (506), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 105/219 (47%), Positives = 143/219 (65%), Gaps = 5/219 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTL--DKNGYMAVQVGAGEAK 57
           +R+G++ARK GMT +++  G R PVTVL L+NCQV  + +T+  D + Y AVQV A +  
Sbjct: 1   VRTGLIARKRGMTVMWDDHGARFPVTVLQLENCQVTANIKTVRKDLSEYHAVQVAATDRP 60

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
            K  +K M G F    V PK+ + EF V  D  + P+G+  S  +F  GQ VDV   ++G
Sbjct: 61  AKTATKQMLGHFKKAGVDPKRIVKEFPVTPDAHV-PIGTTLSAVHFVPGQYVDVIANSLG 119

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF G MK+ NF GLRA+HGVS+SHRS G+ G  QDPGRV+  KKMAGR+GG R T +NL
Sbjct: 120 KGFQGTMKKWNFKGLRASHGVSVSHRSAGAIGAHQDPGRVWPGKKMAGRLGGVRTTTQNL 179

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            V+ VD    LI V+GCVPG   ++ ++VRD+ K  ++ 
Sbjct: 180 AVIRVDSALDLIFVRGCVPGI-DDAHVMVRDAKKKMISV 217


>gi|118486756|gb|ABK95213.1| unknown [Populus trichocarpa]
          Length = 315

 Score =  199 bits (505), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 108/208 (51%), Positives = 143/208 (68%), Gaps = 2/208 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GVVA K GMT +++  G RIP+TVL +D+  V   +T++K G+ A+QVG G+ K K++
Sbjct: 69  RTGVVAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTVEKEGFFALQVGCGQKKEKHL 128

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F +  V  K+KL EF V  +D LLPVG+     +F  GQ VDV G+T+GKGF 
Sbjct: 129 TKPEVGHFRAQGVPMKRKLREFPVT-EDALLPVGTYVGVRHFVPGQFVDVAGITMGKGFQ 187

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F G  A+HG S+SHRS GSTG R  PG+VFK KKM GRMGG + TVKN+ V  
Sbjct: 188 GGMKRHGFKGGPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGVQRTVKNVWVYK 247

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +D  R L+ VKG VPGA+ N ++ ++DS
Sbjct: 248 IDPARNLMWVKGQVPGAEGN-FVFIKDS 274


>gi|294101628|ref|YP_003553486.1| 50S ribosomal protein L3 [Aminobacterium colombiense DSM 12261]
 gi|293616608|gb|ADE56762.1| 50S ribosomal protein L3 [Aminobacterium colombiense DSM 12261]
          Length = 208

 Score =  197 bits (502), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 104/203 (51%), Positives = 136/203 (66%), Gaps = 5/203 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RKLGMT +YN  G+ +PVTV+    C VV  +T +KNGY AVQ+G GE K   
Sbjct: 1   MSIGILGRKLGMTQIYNEAGQAVPVTVIQAGPCPVVSLKTPEKNGYSAVQLGFGEIKPHK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           ++KP++G F   +V P++ L EFR+   D++    VG   + S F  G+ ++V GM+ GK
Sbjct: 61  LTKPVKGQFDKASVEPQRYLREFRL---DNVKGYEVGQAITVSLFEEGEKINVVGMSKGK 117

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF+G MKR NFGG  ATHGVS +HR  GS+G    PG++FK K M GRMGG RVTVKNL 
Sbjct: 118 GFAGVMKRFNFGGTFATHGVSKTHRHGGSSGASSYPGKIFKGKAMPGRMGGERVTVKNLT 177

Query: 179 VVSVDDKRGLILVKGCVPGAKKN 201
           VV+VD    L+LVKG VPGAK +
Sbjct: 178 VVAVDTDNNLLLVKGAVPGAKND 200


>gi|242052463|ref|XP_002455377.1| hypothetical protein SORBIDRAFT_03g009550 [Sorghum bicolor]
 gi|241927352|gb|EES00497.1| hypothetical protein SORBIDRAFT_03g009550 [Sorghum bicolor]
          Length = 318

 Score =  197 bits (502), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 103/208 (49%), Positives = 144/208 (69%), Gaps = 2/208 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GV+  K GM+ +++  G ++P+TVL +D+  V   +T +K G+ A+Q+GAG+ K K++
Sbjct: 71  RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVTQVKTAEKEGFFALQLGAGQKKEKHL 130

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F +  V  K+KL EF V  +D LLPVG+  +  +F  GQ VDVTG+T GKGF+
Sbjct: 131 TKPEVGHFRAQGVPLKRKLREFPVT-EDALLPVGTTITVRHFLPGQFVDVTGITKGKGFA 189

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MK+H F G  A+HG S+SHRS GSTG R  PGRVFKN+KM GRMGG + TVKN+ V  
Sbjct: 190 GVMKKHGFSGGPASHGASLSHRSGGSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 249

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +D  R L+ +KG VPG  + S++ V+DS
Sbjct: 250 IDPARNLLYLKGQVPGP-QGSFVFVKDS 276


>gi|218187896|gb|EEC70323.1| hypothetical protein OsI_01192 [Oryza sativa Indica Group]
          Length = 319

 Score =  197 bits (501), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 102/208 (49%), Positives = 145/208 (69%), Gaps = 2/208 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GV+  K GM+ +++  G ++P+TVL +D+  V   +T +K G+ A+Q+GAG+ K K++
Sbjct: 74  RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVCQVKTAEKEGFFALQLGAGQKKEKHL 133

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F +  V  K+KL EF V  +D L+P+G+  +  +F  GQ VDVTG+T GKGF+
Sbjct: 134 TKPEVGHFRAQGVPLKRKLREFPVT-EDALIPLGTTITVRHFVPGQFVDVTGITKGKGFA 192

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F G+ A+HG S+SHRS GSTG R  PGRVFKN+KM GRMGG + TVKN+ V  
Sbjct: 193 GGMKRHGFSGMPASHGASLSHRSIGSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 252

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +D  R L+ +KG VPG  + S++ V+DS
Sbjct: 253 IDPARNLLYLKGQVPGP-QGSFVFVKDS 279


>gi|115435682|ref|NP_001042599.1| Os01g0251100 [Oryza sativa Japonica Group]
 gi|7106521|dbj|BAA92206.1| putative ribosomal protein L3 [Oryza sativa Japonica Group]
 gi|113532130|dbj|BAF04513.1| Os01g0251100 [Oryza sativa Japonica Group]
 gi|215678787|dbj|BAG95224.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215707174|dbj|BAG93634.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222618109|gb|EEE54241.1| hypothetical protein OsJ_01115 [Oryza sativa Japonica Group]
          Length = 319

 Score =  197 bits (501), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 102/208 (49%), Positives = 145/208 (69%), Gaps = 2/208 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GV+  K GM+ +++  G ++P+TVL +D+  V   +T +K G+ A+Q+GAG+ K K++
Sbjct: 74  RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVCQVKTAEKEGFFALQLGAGQKKEKHL 133

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F +  V  K+KL EF V  +D L+P+G+  +  +F  GQ VDVTG+T GKGF+
Sbjct: 134 TKPEVGHFRAQGVPLKRKLREFPVT-EDALIPLGTTITVRHFVPGQFVDVTGITKGKGFA 192

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F G+ A+HG S+SHRS GSTG R  PGRVFKN+KM GRMGG + TVKN+ V  
Sbjct: 193 GGMKRHGFSGMPASHGASLSHRSIGSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 252

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +D  R L+ +KG VPG  + S++ V+DS
Sbjct: 253 IDPARNLLYLKGQVPGP-QGSFVFVKDS 279


>gi|224110272|ref|XP_002315468.1| predicted protein [Populus trichocarpa]
 gi|222864508|gb|EEF01639.1| predicted protein [Populus trichocarpa]
          Length = 320

 Score =  197 bits (501), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 106/208 (50%), Positives = 143/208 (68%), Gaps = 2/208 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GV+A K GMT +++  G RIP+TVL +D+  V   +T++K G+ A+QVG G+ K K++
Sbjct: 74  RTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTVEKEGFFALQVGCGQKKEKHL 133

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F +  V  K+KL EF V  ++ LLPVG+     +F  GQ VDV G+T+GKGF 
Sbjct: 134 TKPEVGHFRAQGVPMKRKLREFPV-TENALLPVGTCIGVRHFVPGQFVDVAGITMGKGFQ 192

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F G  A+HG S+SHRS GSTG R  PG+VFK KKM GRMGG + TVKN+ V  
Sbjct: 193 GGMKRHGFKGGPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGVQRTVKNVWVYK 252

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +D  R L+ VKG VPGA+ N ++ ++DS
Sbjct: 253 IDPARNLMWVKGQVPGAEGN-FVFIKDS 279


>gi|37912991|gb|AAR05320.1| ribosomal protein L3 [uncultured marine alpha proteobacterium
           HOT2C01]
          Length = 229

 Score =  197 bits (500), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 104/211 (49%), Positives = 141/211 (66%), Gaps = 4/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GM+ +Y   G  IPVTVLH++NC+++   T +      V VGA   K+K 
Sbjct: 1   MRSGIIAKKIGMSNLYTQSGTNIPVTVLHVENCKIIDRVTSENENSDKVLVGA--CKLKK 58

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
             K  +GFF        K L EF + KD ++   G     S+F  GQ +DV+G T GKGF
Sbjct: 59  TKKSQKGFFDKKKTDAYKYLREFEISKDQEI-KSGDELKASHFKEGQFIDVSGYTKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNF GLRA+HGVS+SHRSHGSTG  QDPG+VFK KKMAG+ G    T+++L+VV
Sbjct: 118 AGVMKRHNFSGLRASHGVSVSHRSHGSTGQCQDPGKVFKGKKMAGQYGDVHKTLQSLQVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD+++ LI VKG  PG+ + +W++V DS K
Sbjct: 178 KVDEQKNLICVKGATPGS-RGTWLVVEDSIK 207


>gi|18401521|ref|NP_566579.1| RPL3P (RIBOSOMAL PROTEIN L3 PLASTID); structural constituent of
           ribosome [Arabidopsis thaliana]
 gi|42559534|sp|Q9LRN8|RK3B_ARATH RecName: Full=50S ribosomal protein L3-2, chloroplastic; Flags:
           Precursor
 gi|11994685|dbj|BAB02923.1| 50S ribosomal protein L3 [Arabidopsis thaliana]
          Length = 324

 Score =  197 bits (500), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 101/209 (48%), Positives = 146/209 (69%), Gaps = 2/209 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K GMT +++  G+RIP+++L +D+  V   +T++K G  A+Q+G G+ K K++
Sbjct: 76  RTGIIAVKCGMTALWDKWGKRIPISILWVDDNIVSQVKTVEKEGIFALQIGCGQKKPKHL 135

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SK + G F +  V  K+KL EF V  +D LLPVG+     +F  GQ VDVTG+T GKGF 
Sbjct: 136 SKAVVGHFRAQGVPLKRKLREFPVT-EDALLPVGTSLGVRHFVPGQYVDVTGITRGKGFQ 194

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F G+ A+HG S+SHRS GSTG R  PG+VFK +KMAGRMG ++ TVKN+ V  
Sbjct: 195 GCMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGADQRTVKNVWVYK 254

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           +D  R L+ V+G VPGA+ N ++ ++D++
Sbjct: 255 IDPARNLMWVRGQVPGAEGN-FVFIKDAW 282


>gi|117924155|ref|YP_864772.1| 50S ribosomal protein L3P [Magnetococcus sp. MC-1]
 gi|212288406|sp|A0L5X3|RL3_MAGSM RecName: Full=50S ribosomal protein L3
 gi|117607911|gb|ABK43366.1| LSU ribosomal protein L3P [Magnetococcus sp. MC-1]
          Length = 214

 Score =  197 bits (500), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 105/211 (49%), Positives = 141/211 (66%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++ RKLGM+ ++  +G+RIPVT++ L  C VV  R+ +++GY AVQ+G  EAK   
Sbjct: 1   MRSGLIGRKLGMSQMFTEDGQRIPVTLVQLGPCAVVAKRSDEQDGYNAVQLGFEEAKPSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SK +RG ++  NV+P++ L EFRV  + +   VG   +   F V   VDVTG T+GKGF
Sbjct: 61  LSKTVRGQYAKANVTPRRVLREFRV-SNPESYEVGQELTAEQFAVDSFVDVTGKTVGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR  F G RA+HG    HRS GS G  Q PGRV+KNKKMAG MG    TV+NL+V 
Sbjct: 120 AGVMKRWGFRGGRASHGAHKVHRSGGSIGQCQTPGRVYKNKKMAGHMGQQTRTVQNLKVA 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD  + +I VKG +PG+ K S +LVRD+ K
Sbjct: 180 YVDAVQSIIAVKGSIPGS-KGSLVLVRDALK 209


>gi|303287272|ref|XP_003062925.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455561|gb|EEH52864.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 221

 Score =  197 bits (500), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 104/211 (49%), Positives = 139/211 (65%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
            R G +A K+GMT  +N  G R+P+TVL +D C+VV  +T +K GY A+Q+GAG  K K 
Sbjct: 4   QRVGALAVKVGMTQEWNEHGARVPLTVLWIDECEVVQAKTPEKEGYAALQMGAGSKKRKQ 63

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++    G F++  V  K++L EFRV   D +LPVG+V   S+F  GQ VD+ G TIGKGF
Sbjct: 64  ITGAEYGHFAARGVQIKRELSEFRV-TPDAILPVGTVVDASHFLAGQYVDIQGKTIGKGF 122

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G MKR  F GL A+HG +  HR+HGS G  QDPGRV+K KKMAG+MG    TV+N  V 
Sbjct: 123 QGPMKRWGFAGLPASHGTTKKHRAHGSIGNSQDPGRVWKGKKMAGQMGNRTRTVQNCFVY 182

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R LI V G VPG K+ +++ V+D+ +
Sbjct: 183 RVDPERNLIYVVGQVPG-KRGNFVRVKDALR 212


>gi|302307337|ref|NP_983967.2| ADL129Wp [Ashbya gossypii ATCC 10895]
 gi|299788953|gb|AAS51791.2| ADL129Wp [Ashbya gossypii ATCC 10895]
          Length = 267

 Score =  196 bits (499), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 97/212 (45%), Positives = 145/212 (68%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R GV+ RK+GM   +++  G R+  TVL ++N +VV+ +T+  NGY A QVG G     
Sbjct: 50  LRCGVLTRKVGMMPYFDVATGARMAATVLEMNNVEVVLQKTVAANGYWACQVGYGNKHPS 109

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            V++ + G F+S  V+PK+K+ EFRV+ ++ LLPVG++  PS+F+ GQ VD+  ++ GKG
Sbjct: 110 KVTRQLLGHFASKEVNPKEKVTEFRVKNEEGLLPVGTLLKPSFFSPGQYVDLRSVSKGKG 169

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR+NF G +A+HG S+SHR  GS G  Q PGR+   KKM G MG  RVT++N++V
Sbjct: 170 FQGVMKRYNFKGQKASHGNSLSHRKGGSYGQNQTPGRILPGKKMPGHMGVQRVTIQNVQV 229

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           + V D +G+I+VKG V G  K +++ V+D+ K
Sbjct: 230 LEVQDSKGVIIVKGSVAGP-KGAFVKVQDAIK 260


>gi|73667228|ref|YP_303244.1| 50S ribosomal protein L3 [Ehrlichia canis str. Jake]
 gi|109893428|sp|Q3YRK9|RL3_EHRCJ RecName: Full=50S ribosomal protein L3
 gi|72394369|gb|AAZ68646.1| LSU ribosomal protein L3P [Ehrlichia canis str. Jake]
          Length = 231

 Score =  196 bits (498), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 104/214 (48%), Positives = 150/214 (70%), Gaps = 5/214 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+   K+G T +++ EG+RIPVT+LHL +  ++  +T D NGY AV +G  E+ V N+
Sbjct: 4   RIGLFLEKVGHTAIFDNEGKRIPVTLLHLRDSFIISTKTKDINGYNAVVLGV-ESSV-NI 61

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP        N++ K ++FE RV   D ++  G+  S ++F   Q +DVTG ++GKGF+
Sbjct: 62  KKPQLKILEKSNITAKCRIFESRVDNLDGIVK-GAKISITHFVENQYIDVTGYSLGKGFA 120

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF GL+A+HGVSI+HRS GSTG  QDPGRV+K KKMAG +G ++VTV+NL+V+ 
Sbjct: 121 GVMKRHNFKGLKASHGVSIAHRSQGSTGQCQDPGRVYKGKKMAGHLGSSKVTVQNLKVIL 180

Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAV 214
           VD +R L++VKG  +PGA K S++ V+D+ K +V
Sbjct: 181 VDQERSLLVVKGNNIPGA-KGSYVFVKDAVKKSV 213


>gi|299473316|emb|CBN77715.1| Ribosomal protein L3 [Ectocarpus siliculosus]
          Length = 369

 Score =  196 bits (497), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 107/213 (50%), Positives = 139/213 (65%), Gaps = 2/213 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           RSG +A K+G   +++  G R PVTVL LD C+VV  +T + +GY ++Q+G GE K KNV
Sbjct: 117 RSGALAMKVGSMAIFDSWGVRHPVTVLQLDECEVVQVKTTETDGYTSLQLGVGERKTKNV 176

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP    F    V+PK+KL EFRV  +  LLPVG      +F  GQ VDV G + GKGF 
Sbjct: 177 NKPDAERFRRAGVNPKRKLMEFRVSAEA-LLPVGFQLRAQHFVAGQKVDVCGTSKGKGFQ 235

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR  F G RA+HGVS + R  GSTG  QDPGRVFK KKM GRMG +RVTV+NL+++ 
Sbjct: 236 GGMKRWGFKGQRASHGVSKTPRHIGSTGQCQDPGRVFKGKKMPGRMGTDRVTVQNLKILK 295

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           +D  R L+ V+G VPG +   ++ V D+ K A 
Sbjct: 296 MDPVRELLFVRGHVPG-QNGGFVRVTDAIKGAA 327


>gi|255712065|ref|XP_002552315.1| KLTH0C02002p [Lachancea thermotolerans]
 gi|238933694|emb|CAR21877.1| KLTH0C02002p [Lachancea thermotolerans]
          Length = 268

 Score =  196 bits (497), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 99/213 (46%), Positives = 141/213 (66%), Gaps = 2/213 (0%)

Query: 2   RSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           R G ++ K GM   ++   G R+  TVL L+N +V++HR L  NGY A QVG G      
Sbjct: 54  RCGALSLKRGMIPYFDEASGNRVAATVLELNNVEVIMHRNLKDNGYFACQVGFGSKHPSK 113

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS+ M G F+S  V+PK+K+ EFRV+    LLP+G++  PS+F  GQ VD+  ++ GKGF
Sbjct: 114 VSRQMLGHFASKIVNPKEKVVEFRVKDQSGLLPLGTLIKPSFFMPGQYVDLRSISKGKGF 173

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR+NF GL+A+HGVS+SHR  GS G  Q PGRV   KKM G MG  +VT++N +++
Sbjct: 174 AGVMKRYNFKGLKASHGVSVSHRKGGSYGQNQTPGRVLPGKKMPGHMGVQQVTIQNSQIL 233

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            VDD+ G+++VKG V G  K  ++ ++D+ K A
Sbjct: 234 KVDDENGVVIVKGSVAGP-KGGFVRIQDAIKKA 265


>gi|67528204|ref|XP_661912.1| hypothetical protein AN4308.2 [Aspergillus nidulans FGSC A4]
 gi|40741279|gb|EAA60469.1| hypothetical protein AN4308.2 [Aspergillus nidulans FGSC A4]
 gi|259482889|tpe|CBF77796.1| TPA: 50S ribosomal protein L3 (AFU_orthologue; AFUA_4G06000)
           [Aspergillus nidulans FGSC A4]
          Length = 296

 Score =  196 bits (497), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 107/224 (47%), Positives = 143/224 (63%), Gaps = 12/224 (5%)

Query: 2   RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           R+G +A K GMT +++ E G+RI  TVL LD  QV+ H+T+D +GY AVQ+GAG     N
Sbjct: 72  RTGAIAIKKGMTAIFDPETGKRISCTVLQLDRVQVIAHKTVDVHGYYAVQMGAGWKHPNN 131

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K + G FS   VSPK+ ++EFRV+ +D LLPVG + +  +F  GQ VD    T GKGF
Sbjct: 132 VTKSLLGHFSEQGVSPKRHVYEFRVKDEDGLLPVGQLVNADWFHEGQYVDARSNTKGKGF 191

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179
           +G MKRH FGG   +HGVS++HRS GS G  Q  G RV+  KKMAG MG  + TV+NL+V
Sbjct: 192 AGVMKRHGFGGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLKV 251

Query: 180 VSVDDKRGLILVKGCVPGAK----------KNSWILVRDSFKSA 213
           + VD + GL+LV G V G K          K  W +  +S +S+
Sbjct: 252 LKVDAENGLVLVNGSVSGPKGCVVRIQDAIKKPWPVNPESAQSS 295


>gi|322710687|gb|EFZ02261.1| 60S ribosomal protein L3 [Metarhizium anisopliae ARSEF 23]
          Length = 639

 Score =  195 bits (495), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 99/200 (49%), Positives = 136/200 (68%), Gaps = 2/200 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+GV+A K GMT ++ +   RIP TVL LD  QVV ++T +K+GY AVQ+GAG  + +N
Sbjct: 382 LRAGVLATKKGMTSMF-VGKTRIPCTVLQLDQVQVVANKTREKHGYWAVQIGAGSRQPRN 440

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+ PM G++ +  ++PK +L EF V+  + LLPVGS   P +F  GQ+VDV   + G GF
Sbjct: 441 VTSPMLGYYEAKGIAPKSQLAEFTVRGREGLLPVGSQLLPDWFQTGQIVDVRAKSRGMGF 500

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179
           +G MKRH F G  A+HG S +HR+ G+TG  Q  G RV   KKM GRMG   VTV+NL+V
Sbjct: 501 AGGMKRHGFAGQEASHGNSKNHRTIGTTGPSQGSGSRVLPGKKMPGRMGNEWVTVQNLKV 560

Query: 180 VSVDDKRGLILVKGCVPGAK 199
           + VD++ G++LV G VPG K
Sbjct: 561 MKVDNELGIVLVSGAVPGPK 580


>gi|164663113|ref|XP_001732678.1| hypothetical protein MGL_0453 [Malassezia globosa CBS 7966]
 gi|159106581|gb|EDP45464.1| hypothetical protein MGL_0453 [Malassezia globosa CBS 7966]
          Length = 336

 Score =  195 bits (495), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 102/219 (46%), Positives = 143/219 (65%), Gaps = 7/219 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-----RTLDKNGYMAVQVGAGE 55
           +R G++ RK GMT ++  +G R+P TVL++D+ QV +H      + D+  YMA+QV A +
Sbjct: 64  LRVGLITRKKGMTTMFMPDGTRVPATVLYVDSNQVSMHVQRDAPSQDEAPYMALQVAASD 123

Query: 56  AKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMT 115
           A+   VS P+RG  S   + PK+ + EFRV  D  +LP+G+  S ++F  GQ VDV  +T
Sbjct: 124 ARESAVSAPVRGHLSRAGLGPKRVIKEFRVTPDA-MLPIGTQLSAAHFVPGQDVDVRAIT 182

Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
            GKGF+G MKRHNF G  A+HG S++HR+ GS G  QDPGRV+  K+M GRMGG+  TV+
Sbjct: 183 RGKGFAGVMKRHNFAGGNASHGASLAHRTPGSVGNNQDPGRVWPGKRMPGRMGGHYRTVQ 242

Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           N+ V+ +D K  LI VKG VPG      + V+D+ KS V
Sbjct: 243 NVRVLRIDVKNELIFVKGQVPGPDGGV-VFVQDALKSMV 280


>gi|255083651|ref|XP_002508400.1| predicted protein [Micromonas sp. RCC299]
 gi|226523677|gb|ACO69658.1| predicted protein [Micromonas sp. RCC299]
          Length = 259

 Score =  194 bits (494), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 102/210 (48%), Positives = 137/210 (65%), Gaps = 2/210 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           RSG +A K GMT  +N  G R+P+TVL +D+C+V   +T +K GY A+Q+GAG  K K +
Sbjct: 14  RSGAIAVKCGMTAEWNEHGVRVPLTVLWIDDCRVTQVKTQEKEGYTALQLGAGSKKAKRL 73

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           ++  RG F + +V    +L EFRV  D  +LPVG+    S+F+ GQ VD+ G TIGKGF 
Sbjct: 74  NRSERGHFIAGDVPFSAELTEFRVSPDA-ILPVGTAIGASHFSAGQYVDIQGRTIGKGFQ 132

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR  F GL A+HG +  HR+HGS G  QDPGRV+K KKMAGRMG    TV+++ V  
Sbjct: 133 GPMKRWGFSGLPASHGTTKKHRAHGSIGNSQDPGRVWKGKKMAGRMGNRTRTVQSVFVYK 192

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           VD  R L+ VKG VPG K   ++ + D+ +
Sbjct: 193 VDADRNLLYVKGQVPG-KAGRFLKITDALR 221


>gi|262277094|ref|ZP_06054887.1| 50S ribosomal protein L3 [alpha proteobacterium HIMB114]
 gi|262224197|gb|EEY74656.1| 50S ribosomal protein L3 [alpha proteobacterium HIMB114]
          Length = 260

 Score =  194 bits (494), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 104/212 (49%), Positives = 139/212 (65%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V +KLGMT  +   G  +PVTVL ++  +VV     +K GY AV VG G  K   
Sbjct: 1   MAIGLVGKKLGMTQRFFENGESLPVTVLKIEKAKVVDVINKEKRGYSAVLVGYGHIKNSK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++K M+GFF+  +  PKK L EFR++   +L P G+  +       + VDV   TIGKGF
Sbjct: 61  LTKQMKGFFAKKSQEPKKILKEFRLENTKELKP-GTEINLDVLKDKKYVDVRAKTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G+MKRHNFGG+RATHGVSISHR+HGSTG  QDPG+VFK KKMAG MG    T   LEVV
Sbjct: 120 AGSMKRHNFGGMRATHGVSISHRAHGSTGQCQDPGKVFKGKKMAGHMGAKYRTTLGLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
             D +  L+ +KG VPG+ KNS++ ++++ K+
Sbjct: 180 EADLENNLLYLKGAVPGS-KNSYVEIQEAIKN 210


>gi|115400825|ref|XP_001216001.1| 60S ribosomal protein L9, mitochondrial precursor [Aspergillus
           terreus NIH2624]
 gi|114191667|gb|EAU33367.1| 60S ribosomal protein L9, mitochondrial precursor [Aspergillus
           terreus NIH2624]
          Length = 335

 Score =  194 bits (494), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 106/201 (52%), Positives = 134/201 (66%), Gaps = 2/201 (0%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G VA K GMT VY+   GRRI  TVL LD  QVV H+T  ++GY AVQVGAG     
Sbjct: 113 LRTGAVAIKKGMTGVYDAATGRRIACTVLQLDRVQVVAHKTRPQHGYYAVQVGAGWKHPS 172

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV+K + G FS+  VSPK+ +FEFRV+ +  LLPVG     S+F  GQ VD    T GKG
Sbjct: 173 NVTKSLLGHFSAHGVSPKRHVFEFRVRDEAGLLPVGRDIPASWFREGQFVDARSTTKGKG 232

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKRH FGG   +HGVS++HRS GS G  Q  G RV+  KKMAG MG  + TV+NL+
Sbjct: 233 FAGVMKRHGFGGQDRSHGVSLTHRSMGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLK 292

Query: 179 VVSVDDKRGLILVKGCVPGAK 199
           V+ VD + G+++V+G V G K
Sbjct: 293 VLKVDPENGIVVVQGAVSGPK 313


>gi|326437537|gb|EGD83107.1| hypothetical protein PTSG_03748 [Salpingoeca sp. ATCC 50818]
          Length = 307

 Score =  194 bits (493), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 98/209 (46%), Positives = 142/209 (67%), Gaps = 2/209 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++ARKLGMT  + + G R+P+T   +++ QVV H+T+D++GY A+++GA   + + V
Sbjct: 63  RTGILARKLGMTQTFTLWGERVPLTAFQIEDLQVVEHKTVDRDGYSAMRLGAVNLEPRKV 122

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP+ G F    + PK+ + EFRV  +D +LP+G+  S S+F  GQ VDV G+TIGKGF 
Sbjct: 123 KKPVLGQFRKHKLPPKQHVAEFRV-TEDCILPIGTHISCSHFIPGQYVDVQGVTIGKGFQ 181

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF G+ A+HGV+++HR  G  G  QDPGRV+K K+M GRMGG +     L+V  
Sbjct: 182 GVMKRHNFKGMPASHGVTLTHRKAGGLGGGQDPGRVWKGKRMEGRMGGVKRYQFGLQVYQ 241

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           +D +  L+ V G  PGA KNS + +RD+ 
Sbjct: 242 IDTRYNLLYVVGSAPGA-KNSIVKIRDAM 269


>gi|289209329|ref|YP_003461395.1| 50S ribosomal protein L3 [Thioalkalivibrio sp. K90mix]
 gi|288944960|gb|ADC72659.1| 50S ribosomal protein L3 [Thioalkalivibrio sp. K90mix]
          Length = 214

 Score =  194 bits (493), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 102/213 (47%), Positives = 140/213 (65%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RKLGM+ V+  +G  +PVTVL +DN +VV  +  + +GY AVQV AG  K   
Sbjct: 1   MAIGLIGRKLGMSRVFTDDGVSVPVTVLQVDNNRVVQIKRSEGDGYNAVQVTAGARKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           VSKP  G +++ +V P + L+EFRV+ D+ + L  G   +   F  GQ+VDVT  + GKG
Sbjct: 61  VSKPEAGHYAAASVEPGRGLWEFRVEADELEGLAPGDAITVDRFEEGQVVDVTSQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F GA+KRHNF    ATHG S++HR+ GS G  Q PGRVFK KKMAG MG  R T++NL+V
Sbjct: 121 FQGAVKRHNFRTQDATHGNSLAHRAPGSIGQNQSPGRVFKGKKMAGHMGAERKTIQNLKV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD  R L+L++G VPGA     +++R + K+
Sbjct: 181 VRVDADRSLVLIQGAVPGAPSTD-VMIRPAVKA 212


>gi|297834662|ref|XP_002885213.1| hypothetical protein ARALYDRAFT_479224 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331053|gb|EFH61472.1| hypothetical protein ARALYDRAFT_479224 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 323

 Score =  194 bits (493), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 100/209 (47%), Positives = 144/209 (68%), Gaps = 2/209 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K GMT +++  G R+P+++L +D+  V   +T++K G  A+Q+G G+ K K++
Sbjct: 75  RTGIIAVKCGMTALWDKWGARVPISILWVDDNIVSQVKTVEKEGIFALQIGCGQKKPKHL 134

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SK + G F +  V  K+KL EF V  +D LLPVG+     +F  GQ VDVTG+T GKGF 
Sbjct: 135 SKAVVGHFRAQGVPLKRKLREFPVT-EDALLPVGTSLGVRHFVPGQYVDVTGITRGKGFQ 193

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F G+  +HG S+SHRS GSTG R  PG+VFK KKMAGRMG ++ TVKN+ V  
Sbjct: 194 GCMKRHGFSGMPGSHGASLSHRSGGSTGQRDAPGKVFKGKKMAGRMGADQRTVKNVWVYK 253

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           +D  R L+ V+G VPGA+ N ++ ++D++
Sbjct: 254 IDPARNLMWVRGQVPGAEGN-FVFIKDAW 281


>gi|296827944|ref|XP_002851250.1| 54S ribosomal protein L9 [Arthroderma otae CBS 113480]
 gi|238838804|gb|EEQ28466.1| 54S ribosomal protein L9 [Arthroderma otae CBS 113480]
          Length = 303

 Score =  194 bits (492), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 105/213 (49%), Positives = 145/213 (68%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GMT +Y+ E G R P TVL LD  QV+ H+TL+KNGY AVQVG+G    K
Sbjct: 76  LRTGALAIKKGMTAIYDPETGVRTPCTVLQLDGAQVISHKTLEKNGYCAVQVGSGFKSEK 135

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV++PM G FS+  VSPK  + EFRV+ +  LLPVG V +  +F  GQ VDV   + G G
Sbjct: 136 NVTRPMLGHFSTNGVSPKLYIHEFRVKDETGLLPVGEVINADWFQEGQYVDVRSNSRGMG 195

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+GAMK+  F G   +HGVS++HRS GST   Q  G RV+  KKM GRMG ++VT+++L+
Sbjct: 196 FAGAMKKWGFHGQDRSHGVSLTHRSLGSTAPSQGGGSRVYPGKKMPGRMGNHQVTLQSLK 255

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V+ VD ++G+++VKG V G K    + ++D+ K
Sbjct: 256 VLKVDAEKGIVVVKGSVAGPKGRC-VKIQDAIK 287


>gi|225432181|ref|XP_002268657.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297736812|emb|CBI26013.3| unnamed protein product [Vitis vinifera]
          Length = 307

 Score =  193 bits (491), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 103/208 (49%), Positives = 140/208 (67%), Gaps = 2/208 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G +A K GM+ +++  G R+P+TVL LD+  V   +T +K G  A+QVG G+ K K++
Sbjct: 59  RTGAIAVKCGMSALWDKWGARVPITVLWLDDNIVSQVKTFEKEGLNALQVGCGQKKAKHL 118

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F +  V  K+KL EF V  +D LLPVG+     +F  GQ VDVTG+T GKGF 
Sbjct: 119 TKPEVGHFRAQGVPLKRKLREFPVT-EDALLPVGTTIGVRHFVPGQYVDVTGITRGKGFQ 177

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR  F G+ A+HG S+SHRS GSTG R  PG+VFK KKM GRMGG + TVKN+ V  
Sbjct: 178 GGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGKQRTVKNVWVYK 237

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +D  R L+ V+G VPGA+ N ++ ++D+
Sbjct: 238 IDPTRNLMWVRGQVPGAEGN-FVFIKDA 264


>gi|315056921|ref|XP_003177835.1| 54S ribosomal protein L9 [Arthroderma gypseum CBS 118893]
 gi|311339681|gb|EFQ98883.1| 54S ribosomal protein L9 [Arthroderma gypseum CBS 118893]
          Length = 304

 Score =  193 bits (490), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 104/213 (48%), Positives = 145/213 (68%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GMT +Y+ E G R P TVL LD  QVV H+T +KNGY AVQVG+G    +
Sbjct: 77  LRTGALAIKKGMTAIYDPETGVRTPCTVLQLDGAQVVSHKTFEKNGYCAVQVGSGFKYER 136

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV+KPM G FS+  VSPK+ + EFRV+ +  LLP+G V +  +F  GQ VDV   + G G
Sbjct: 137 NVTKPMLGHFSANGVSPKRHIHEFRVKDEAGLLPIGEVINADWFQEGQYVDVRSNSRGMG 196

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+GAMK+  F G   +HGVS++HRS GST   Q  G RV+  KKM GRMG ++VT+++L+
Sbjct: 197 FAGAMKKWGFHGQDRSHGVSLTHRSLGSTAPSQGGGSRVYPGKKMPGRMGNHQVTLQSLK 256

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V+ VD ++G+++VKG V G K    + ++D+ K
Sbjct: 257 VLKVDAEKGIVVVKGGVAGPKGRC-VKIQDAIK 288


>gi|302498268|ref|XP_003011132.1| hypothetical protein ARB_02654 [Arthroderma benhamiae CBS 112371]
 gi|291174680|gb|EFE30492.1| hypothetical protein ARB_02654 [Arthroderma benhamiae CBS 112371]
 gi|326474709|gb|EGD98718.1| 50S ribosomal protein L3 [Trichophyton tonsurans CBS 112818]
 gi|326484840|gb|EGE08850.1| 50S ribosomal protein L3 [Trichophyton equinum CBS 127.97]
          Length = 304

 Score =  193 bits (490), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 102/213 (47%), Positives = 145/213 (68%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GMT +Y+ E G R P TVL LD  QV+ H+T +KNGY AVQVG+G    +
Sbjct: 77  LRTGALAIKKGMTAIYDPETGVRTPCTVLQLDGAQVISHKTFEKNGYCAVQVGSGLKNER 136

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV++PM G FS+  VSPK+ + EFRV+ +  LLP+G V +  +F  GQ VDV   + G G
Sbjct: 137 NVTRPMLGHFSANGVSPKRHIHEFRVKDETGLLPIGEVINADWFQEGQYVDVRSNSRGMG 196

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+GAMK+  F G   +HGVS++HRS GST   Q  G RV+  KKM GRMG ++VT+++L+
Sbjct: 197 FAGAMKKWGFHGQDRSHGVSLTHRSLGSTAPSQGGGSRVYPGKKMPGRMGNHQVTLQSLK 256

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V+ VD ++G+++VKG V G K    + ++D+ K
Sbjct: 257 VLKVDAEKGIVVVKGGVAGPKGRC-VKIQDAIK 288


>gi|302662377|ref|XP_003022845.1| hypothetical protein TRV_03069 [Trichophyton verrucosum HKI 0517]
 gi|291186810|gb|EFE42227.1| hypothetical protein TRV_03069 [Trichophyton verrucosum HKI 0517]
          Length = 304

 Score =  192 bits (489), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 102/213 (47%), Positives = 145/213 (68%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GMT +Y+ E G R P TVL LD  QV+ H+T +KNGY AVQVG+G    +
Sbjct: 77  LRTGALAIKKGMTAIYDPETGVRTPCTVLQLDGAQVISHKTFEKNGYCAVQVGSGLKSER 136

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV++PM G FS+  VSPK+ + EFRV+ +  LLP+G V +  +F  GQ VDV   + G G
Sbjct: 137 NVTRPMLGHFSANGVSPKRHIHEFRVKDETGLLPIGEVINADWFQEGQYVDVRSNSRGMG 196

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+GAMK+  F G   +HGVS++HRS GST   Q  G RV+  KKM GRMG ++VT+++L+
Sbjct: 197 FAGAMKKWGFHGQDRSHGVSLTHRSLGSTAPSQGGGSRVYPGKKMPGRMGNHQVTLQSLK 256

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V+ VD ++G+++VKG V G K    + ++D+ K
Sbjct: 257 VLKVDAEKGIVVVKGGVAGPKGRC-VKIQDAIK 288


>gi|224005591|ref|XP_002291756.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220972275|gb|EED90607.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 232

 Score =  192 bits (489), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/213 (51%), Positives = 137/213 (64%), Gaps = 4/213 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVKN 60
           R G +  KLGM  +++  G R P TVL+LDN  VV  ++ D  +GY AVQ+GAGE K KN
Sbjct: 20  RCGALGIKLGMMPLWDKWGERHPCTVLYLDNNVVVRTKSKDSVDGYDAVQIGAGERKAKN 79

Query: 61  VSKPMRGFFSS--VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           V+KP+   ++   VN +P   + EFRV   D + P GS     +F  GQ VD+ G + GK
Sbjct: 80  VNKPLMCHYAKFGVNENPPYVVREFRVTTPDAMPPPGSKIHARHFVPGQNVDIAGTSKGK 139

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G MKRH F G+ ATHG S SHR+ GSTG  QDPGRVFK KKM GRMGG RVT +NL 
Sbjct: 140 GFQGGMKRHGFKGMPATHGTSKSHRAIGSTGQCQDPGRVFKGKKMPGRMGGVRVTKQNLR 199

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           VV +D  R LI VKG VPG  K  ++ +RD+ K
Sbjct: 200 VVKIDRGRNLIYVKGAVPG-NKGEFVEIRDAVK 231


>gi|327301767|ref|XP_003235576.1| 50S ribosomal protein L3 [Trichophyton rubrum CBS 118892]
 gi|326462928|gb|EGD88381.1| 50S ribosomal protein L3 [Trichophyton rubrum CBS 118892]
          Length = 302

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 102/213 (47%), Positives = 145/213 (68%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GMT +Y+ E G R P TVL LD  QV+ H+T +KNGY AVQVG+G    +
Sbjct: 75  LRTGALAIKKGMTAIYDPETGVRTPCTVLQLDGAQVISHKTFEKNGYCAVQVGSGLKNER 134

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV++PM G FS+  VSPK+ + EFRV+ +  LLP+G V +  +F  GQ VDV   + G G
Sbjct: 135 NVTRPMLGHFSANGVSPKRHIHEFRVKDETGLLPIGEVINADWFQEGQYVDVRSNSRGMG 194

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+GAMK+  F G   +HGVS++HRS GST   Q  G RV+  KKM GRMG ++VT+++L+
Sbjct: 195 FAGAMKKWGFHGQDRSHGVSLTHRSLGSTAPSQGGGSRVYPGKKMPGRMGNHQVTLQSLK 254

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V+ VD ++G+++VKG V G K    + ++D+ K
Sbjct: 255 VLKVDAEKGIVVVKGGVAGPKGRC-VKIQDAIK 286


>gi|6321659|ref|NP_011736.1| Mrpl9p [Saccharomyces cerevisiae S288c]
 gi|1710598|sp|P31334|RM09_YEAST RecName: Full=54S ribosomal protein L9, mitochondrial; AltName:
           Full=YmL9; Flags: Precursor
 gi|886912|emb|CAA61168.1| ORF 269 [Saccharomyces cerevisiae]
 gi|1323396|emb|CAA97248.1| MRPL9 [Saccharomyces cerevisiae]
 gi|45270438|gb|AAS56600.1| YGR220C [Saccharomyces cerevisiae]
 gi|151943496|gb|EDN61807.1| YmL9 [Saccharomyces cerevisiae YJM789]
 gi|190406772|gb|EDV10039.1| 60S ribosomal protein L9, mitochondrial precursor [Saccharomyces
           cerevisiae RM11-1a]
 gi|207344963|gb|EDZ71935.1| YGR220Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256272642|gb|EEU07619.1| Mrpl9p [Saccharomyces cerevisiae JAY291]
 gi|259146721|emb|CAY79978.1| Mrpl9p [Saccharomyces cerevisiae EC1118]
 gi|285812413|tpg|DAA08313.1| TPA: Mrpl9p [Saccharomyces cerevisiae S288c]
          Length = 269

 Score =  192 bits (488), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 98/211 (46%), Positives = 139/211 (65%), Gaps = 2/211 (0%)

Query: 2   RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           R G++ RK GM   ++   G R   T+L ++N +V++HRT + NGY A QVG G   +  
Sbjct: 58  RCGLITRKKGMMPYFDKSTGERSAATILEVNNVEVIMHRTSEVNGYFACQVGYGSRHLSK 117

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS+ M G F+S  V+PK+ + EFRV+ +  L+P G++  PS+F  GQ VDV  ++ GKGF
Sbjct: 118 VSRQMLGHFASKVVNPKEHVAEFRVKDEKGLIPPGTLLKPSFFKEGQYVDVRSVSKGKGF 177

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR+ F GLRA+HG SI HR  GS G  QDPGRV   +KM G MG   VT++N++V+
Sbjct: 178 TGVMKRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVL 237

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VDD+  +I VKG V G  KNS++ ++D+ K
Sbjct: 238 KVDDENNVIWVKGSVAGP-KNSFVKIQDAIK 267


>gi|212528688|ref|XP_002144501.1| 50S ribosomal protein L3 [Penicillium marneffei ATCC 18224]
 gi|210073899|gb|EEA27986.1| 50S ribosomal protein L3 [Penicillium marneffei ATCC 18224]
          Length = 300

 Score =  191 bits (486), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 104/213 (48%), Positives = 142/213 (66%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G++A K GMT +Y+ E G+R P TVL LD CQVV H+T+DK+GY AVQVGAG  K +
Sbjct: 72  LRTGLLAIKKGMTGLYDPETGKRTPCTVLQLDRCQVVSHKTMDKHGYFAVQVGAGFKKPQ 131

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++K + G FS   ++PK+ + EFRV+    LL +GS  S ++F VGQ VD    T GKG
Sbjct: 132 RLTKALLGHFSVNEIAPKRYVHEFRVKDQSGLLEIGSTLSANWFQVGQFVDARSNTKGKG 191

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKRH F G   +HGVS++HRS GS G  Q  G RV+  KKMAG MG  + T++NL+
Sbjct: 192 FAGVMKRHGFHGQDRSHGVSLTHRSMGSAGPSQGGGSRVYPGKKMAGNMGNVQNTLQNLK 251

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V+ VD   G+I+V G V G  K   + ++D+ K
Sbjct: 252 VLEVDPVNGIIVVNGSVSGP-KGCLVQLQDALK 283


>gi|328872429|gb|EGG20796.1| ribosomal protein L3 [Dictyostelium fasciculatum]
          Length = 333

 Score =  191 bits (486), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 106/208 (50%), Positives = 138/208 (66%), Gaps = 3/208 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G + +KLGMT VY ++   IPVTV+ L + QVV  +    +G  AVQVGAGE K+KN+
Sbjct: 64  RVGAIGKKLGMTTVY-VDHVAIPVTVIELPDNQVVQVKRKVNDGSNAVQVGAGEIKLKNI 122

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
              ++G F+  +V PK+ + EF+V K    + VG+     +F  GQLV V G + GKGF+
Sbjct: 123 GGTLKGHFAKADVPPKRVVMEFKVTKGG-FMDVGTSIDARHFVPGQLVKVQGTSTGKGFA 181

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR NF GL ATHGVS +HRS GSTGCRQ PGRVFK KKM GR+GG   TV NL+VV 
Sbjct: 182 GGMKRWNFSGLLATHGVSKTHRSIGSTGCRQTPGRVFKGKKMPGRLGGQSSTVNNLQVVK 241

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
           ++ +  +I+VKG VPG K   ++ V DS
Sbjct: 242 INSELNVIMVKGAVPG-KNGGYLRVTDS 268


>gi|145256427|ref|XP_001401384.1| 54S ribosomal protein L9 [Aspergillus niger CBS 513.88]
 gi|134058285|emb|CAK38476.1| unnamed protein product [Aspergillus niger]
          Length = 305

 Score =  191 bits (486), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 97/201 (48%), Positives = 134/201 (66%), Gaps = 2/201 (0%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +  K GMT +Y+ E G+R+P TVL LD  +VV H+T  K+GY AVQ+GAG  +  
Sbjct: 79  LRTGAITFKKGMTALYDPETGKRVPCTVLQLDRVEVVSHKTRQKHGYYAVQLGAGWRRPD 138

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           N++K + G F++  +SPK+ ++EFRV+ +  LLPVG   S  +F  GQ VD    T GKG
Sbjct: 139 NLTKSLLGHFTANGISPKRHVYEFRVKDESGLLPVGQTVSADWFQEGQFVDARSDTKGKG 198

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKRH FGG   +HGVS++HRS GS G  Q  G RV+  KKMAG MG  + TV+NL 
Sbjct: 199 FAGVMKRHGFGGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLR 258

Query: 179 VVSVDDKRGLILVKGCVPGAK 199
           ++ VD + G+++V G V G K
Sbjct: 259 ILKVDAENGIVVVNGSVSGPK 279


>gi|302692256|ref|XP_003035807.1| hypothetical protein SCHCODRAFT_74210 [Schizophyllum commune H4-8]
 gi|300109503|gb|EFJ00905.1| hypothetical protein SCHCODRAFT_74210 [Schizophyllum commune H4-8]
          Length = 323

 Score =  191 bits (486), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 105/216 (48%), Positives = 138/216 (63%), Gaps = 5/216 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTL--DKNGYMAVQVGAGEAK 57
           +R+GV+ARK GMT ++N  G   PVTVL L+NCQV  + RT+  D   Y AVQV A +  
Sbjct: 56  VRTGVIARKKGMTTIFNEHGVACPVTVLQLENCQVTANIRTVRRDHTVYHAVQVAASDKA 115

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
            KN S  M G F+   V PK+ + EF V  D  ++PVG+  S  +F  GQ VDV   +IG
Sbjct: 116 AKNTSIQMLGHFNKAGVPPKQVVKEFPVTPDA-VVPVGTTLSACHFVPGQYVDVVANSIG 174

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF G MKR  FGGL A+HG SISHRS GSTG   DP RV+  +KMAGR+G  R T +NL
Sbjct: 175 KGFQGGMKRWGFGGLAASHGASISHRSLGSTGQNTDPARVWPGRKMAGRLGNERTTTQNL 234

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  +D++  ++ V+G VPG   ++++ VRD+ K A
Sbjct: 235 LVERIDNELNIVYVRGAVPGV-DDAFVQVRDAKKKA 269


>gi|190346390|gb|EDK38465.2| hypothetical protein PGUG_02563 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 279

 Score =  191 bits (485), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 101/210 (48%), Positives = 137/210 (65%), Gaps = 2/210 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  K GM   Y  +G +   TVL +D+C+V+ ++T + +GY AV VG+G  K+KN+
Sbjct: 57  RPGLLGIKRGMITWYTEDGNQFAATVLEVDSCEVMANKTKETDGYTAVMVGSG-TKLKNL 115

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +           VSPK+ + EFRV+ +  L+PVG+     YF VGQLVDV+G++ GKGF+
Sbjct: 116 TPDQLRLAQQAGVSPKRSIREFRVRDESGLIPVGTELRADYFAVGQLVDVSGVSKGKGFA 175

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRH F GL+A+HGVS +HRS GSTG  QDPGRV   KKMAG MG    TV N EV+ 
Sbjct: 176 GVIKRHGFAGLQASHGVSKAHRSAGSTGATQDPGRVLPGKKMAGHMGAVNRTVFNNEVLH 235

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            D   G+++VKG VPG  K S I +RD+ K
Sbjct: 236 ADGDAGILVVKGVVPGPNK-SVIKIRDAKK 264


>gi|58267640|ref|XP_570976.1| ribosomal large subunit assembly and maintenance-related protein
           [Cryptococcus neoformans var. neoformans JEC21]
 gi|134112043|ref|XP_775557.1| hypothetical protein CNBE2710 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50258216|gb|EAL20910.1| hypothetical protein CNBE2710 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57227210|gb|AAW43669.1| ribosomal large subunit assembly and maintenance-related protein,
           putative [Cryptococcus neoformans var. neoformans JEC21]
          Length = 308

 Score =  191 bits (484), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 103/222 (46%), Positives = 139/222 (62%), Gaps = 4/222 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG-YMAVQVGAGEAKVK 59
           +R+G++ARK GMT +++ +GRR PVTVL +D  QVV H        Y  +Q+GA   + K
Sbjct: 43  LRTGLIARKRGMTALWDADGRRWPVTVLQVDANQVVRHSPPPPTSPYHTLQIGASPRREK 102

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             +K   G F    V PK +L EF+V  +D ++PVG+  S  +F  GQ VDV G+TIGKG
Sbjct: 103 TTTKQQLGHFKKAGVEPKYRLKEFQVS-EDAVVPVGTELSAGHFVPGQFVDVQGVTIGKG 161

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKRH F GL+A+HG S+ HRS GS G  QDPGRV   KKM G MG    T +NL +
Sbjct: 162 FQGVMKRHGFRGLKASHGTSVKHRSPGSIGQNQDPGRVIPGKKMPGHMGNVTRTTQNLLI 221

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
             VD    L+ V+GCVPG+  +S++ V+DS K  V  K +++
Sbjct: 222 HRVDHVLNLLYVRGCVPGS-DDSFLYVKDS-KKLVKSKAQLA 261


>gi|3984|emb|CAA46148.1| YmL9 mitochondrial ribosomal protein [Saccharomyces cerevisiae]
          Length = 269

 Score =  191 bits (484), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 97/211 (45%), Positives = 139/211 (65%), Gaps = 2/211 (0%)

Query: 2   RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           R G++ RK GM   ++   G R   T+L ++N +V++HRT + NGY A QVG G   +  
Sbjct: 58  RCGLITRKKGMMPYFDKSTGERSAATILEVNNVEVIMHRTSEVNGYFACQVGYGSRHLSK 117

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS+ M G F+S  V+PK+ + +FRV+ +  L+P G++  PS+F  GQ VDV  ++ GKGF
Sbjct: 118 VSRQMLGHFASKVVNPKEHVAQFRVKDEKGLIPPGTLLKPSFFKEGQYVDVRSVSKGKGF 177

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR+ F GLRA+HG SI HR  GS G  QDPGRV   +KM G MG   VT++N++V+
Sbjct: 178 TGVMKRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVL 237

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VDD+  +I VKG V G  KNS++ ++D+ K
Sbjct: 238 KVDDENNVIWVKGSVAGP-KNSFVKIQDAIK 267


>gi|330819132|ref|XP_003291618.1| hypothetical protein DICPUDRAFT_39301 [Dictyostelium purpureum]
 gi|325078183|gb|EGC31848.1| hypothetical protein DICPUDRAFT_39301 [Dictyostelium purpureum]
          Length = 340

 Score =  191 bits (484), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 100/208 (48%), Positives = 138/208 (66%), Gaps = 2/208 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G + +K+GM   Y I     PVTV+ + N QV   +   K+G   VQ+GA E ++KNV
Sbjct: 58  RMGAIGKKVGMMTTY-IGAEAYPVTVIQIPNNQVTQVKRKIKDGANMVQIGADEIRMKNV 116

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP+RG F+  NV+PK+ L EF+V  +   + +G+     +F  GQLV V G + GKGF+
Sbjct: 117 PKPLRGHFAKANVTPKRILMEFKVTNNALNIDLGTPILARHFVPGQLVTVKGKSSGKGFA 176

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR NF G  ATHGVS++HRS G+TG RQ PGRVFKN+KM GR+GG   TVKNL+++ 
Sbjct: 177 GGMKRWNFRGQPATHGVSLTHRSIGATGNRQTPGRVFKNRKMPGRLGGESCTVKNLQILK 236

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
           ++++   I+VKG VPG KK S++ + DS
Sbjct: 237 INNELNCIMVKGAVPG-KKGSYLKIIDS 263


>gi|301104340|ref|XP_002901255.1| 50S ribosomal protein L3-2 [Phytophthora infestans T30-4]
 gi|262101189|gb|EEY59241.1| 50S ribosomal protein L3-2 [Phytophthora infestans T30-4]
          Length = 285

 Score =  191 bits (484), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 102/196 (52%), Positives = 130/196 (66%), Gaps = 1/196 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K+GM  V++  G R   TVL ++ CQV   +T D++G+ A+Q+G G  K KNV
Sbjct: 39  RTGLLAVKIGMMPVWDNFGYRHNCTVLQVEECQVTQVKTADRHGFNALQLGVGLRKPKNV 98

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SKP+ G  S   V  K++L EFRV  +D LLP+G+  S  +F  GQ VDV G++ GKGF 
Sbjct: 99  SKPVLGHLSKAGVPAKRQLQEFRVS-EDALLPLGTTLSALHFNAGQYVDVCGISKGKGFQ 157

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MK HNF G  A+HG S + R  GSTG  QDPG+VFK KKM GRMGGNRVT  NL +  
Sbjct: 158 GVMKLHNFAGQPASHGNSKTQRHMGSTGQCQDPGKVFKGKKMPGRMGGNRVTRDNLWIAK 217

Query: 182 VDDKRGLILVKGCVPG 197
           +D  R LI VKG VPG
Sbjct: 218 IDVDRNLIYVKGSVPG 233


>gi|238021591|ref|ZP_04602017.1| hypothetical protein GCWU000324_01491 [Kingella oralis ATCC 51147]
 gi|237866205|gb|EEP67247.1| hypothetical protein GCWU000324_01491 [Kingella oralis ATCC 51147]
          Length = 215

 Score =  191 bits (484), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 106/214 (49%), Positives = 138/214 (64%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V+  +G  +PVTVL +   +V   ++ + +GY AVQV  GE K  +
Sbjct: 1   MALGLVGRKVGMTRVFTEQGASVPVTVLEMTANRVTQVKSKETDGYAAVQVTFGEKKANH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF V ++    L  G V + S F VGQLVDVTG + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLHEFVVSEEKAAELKAGDVITVSLFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV++LE+
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKSTVQHLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V VD++R L+LVKG VPGA  NS ++VR S K A
Sbjct: 181 VRVDEERNLLLVKGAVPGA-VNSNVVVRHSVKKA 213


>gi|56707478|ref|YP_169374.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110669949|ref|YP_666506.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis
           FSC198]
 gi|254370829|ref|ZP_04986834.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|81820815|sp|Q5NHW8|RL3_FRATT RecName: Full=50S ribosomal protein L3
 gi|122971067|sp|Q14JC0|RL3_FRAT1 RecName: Full=50S ribosomal protein L3
 gi|54112825|gb|AAV29046.1| NT02FT0098 [synthetic construct]
 gi|56603970|emb|CAG44958.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320282|emb|CAL08341.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151569072|gb|EDN34726.1| hypothetical protein FTBG_00644 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|282158622|gb|ADA78013.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 211

 Score =  191 bits (484), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 99/198 (50%), Positives = 133/198 (67%), Gaps = 1/198 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++  +G  IPVTV+ ++  +V   +T++K+GY A+QV  G  K  N
Sbjct: 1   MSLGLVGRKCGMTRIFTEDGVSIPVTVVQVEPNKVTQVKTVEKDGYNAIQVTTGFKKRSN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM G ++  +V P + L+EF V    +   VGS F  + F  GQ VDV G++ GKGF
Sbjct: 61  VNKPMAGHYAKASVEPGRGLWEFTVDAAAEY-QVGSSFDATMFEAGQKVDVRGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRHNF    ATHG S+SHR HGSTG  Q PGRVFKNKKMAG +G   VT+++LEVV
Sbjct: 120 QGGVKRHNFATQDATHGNSLSHRVHGSTGQNQTPGRVFKNKKMAGHLGNENVTIQSLEVV 179

Query: 181 SVDDKRGLILVKGCVPGA 198
            VD + GL+L+KG +PG+
Sbjct: 180 RVDAENGLLLLKGGIPGS 197


>gi|323456985|gb|EGB12851.1| hypothetical protein AURANDRAFT_19295 [Aureococcus anophagefferens]
          Length = 249

 Score =  190 bits (483), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 107/218 (49%), Positives = 138/218 (63%), Gaps = 10/218 (4%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G +A K+GM   ++  G+R  +TVLH+D C+VV  +    +GY A+Q+GAG  K K+ 
Sbjct: 2   RTGALAVKVGMLGTWDASGQRHALTVLHVDGCRVVQVKDAATDGYTALQLGAGALKPKHA 61

Query: 62  SKPMRGFF-----SSVNVSP---KKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113
                G        +V  +P    + L EFRV  D  +LP G+    ++F  GQLVDV G
Sbjct: 62  PSAHAGHCGAHGGEAVAGTPYELARTLAEFRVSADA-VLPPGTRVPAAHFAPGQLVDVRG 120

Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
            T GKGF GAMKR NFGG RATHGVS +HR+HGS G  Q+PGRVFK KKMAGRMGG   T
Sbjct: 121 ATRGKGFQGAMKRWNFGGQRATHGVSKTHRAHGSMGGCQNPGRVFKGKKMAGRMGGRNRT 180

Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +NL V  +D  R L+ V+GCVPGA K +W+ V D+ K
Sbjct: 181 AQNLTVHKIDTVRDLLFVRGCVPGA-KGTWVRVTDAVK 217


>gi|89255670|ref|YP_513031.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314171|ref|YP_762894.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica
           OSU18]
 gi|118496852|ref|YP_897902.1| 50S ribosomal protein L3 [Francisella tularensis subsp. novicida
           U112]
 gi|134302585|ref|YP_001122556.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|156501620|ref|YP_001427685.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167009889|ref|ZP_02274820.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica
           FSC200]
 gi|187932143|ref|YP_001892128.1| 50S ribosomal protein L3 [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|290953211|ref|ZP_06557832.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295313579|ref|ZP_06804168.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica
           URFT1]
 gi|109893430|sp|Q2A5H0|RL3_FRATH RecName: Full=50S ribosomal protein L3
 gi|122325787|sp|Q0BNS7|RL3_FRATO RecName: Full=50S ribosomal protein L3
 gi|166233143|sp|A7N9S6|RL3_FRATF RecName: Full=50S ribosomal protein L3
 gi|166233144|sp|A0Q4I3|RL3_FRATN RecName: Full=50S ribosomal protein L3
 gi|166233145|sp|A4IZT4|RL3_FRATW RecName: Full=50S ribosomal protein L3
 gi|226725179|sp|B2SDY5|RL3_FRATM RecName: Full=50S ribosomal protein L3
 gi|89143501|emb|CAJ78677.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica
           LVS]
 gi|115129070|gb|ABI82257.1| ribosomal protein L3 [Francisella tularensis subsp. holarctica
           OSU18]
 gi|118422758|gb|ABK89148.1| 50S ribosomal protein L3 [Francisella novicida U112]
 gi|134050362|gb|ABO47433.1| ribosomal protein L3 [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|156252223|gb|ABU60729.1| ribosomal protein L3 [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|187713052|gb|ACD31349.1| 50S ribosomal protein L3 [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|328676321|gb|AEB27191.1| LSU ribosomal protein L3p (L3e) [Francisella cf. novicida Fx1]
          Length = 210

 Score =  190 bits (483), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 99/198 (50%), Positives = 133/198 (67%), Gaps = 1/198 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++  +G  IPVTV+ ++  +V   +T++K+GY A+QV  G  K  N
Sbjct: 1   MSLGLVGRKCGMTRIFTEDGVSIPVTVVQVEPNKVTQVKTVEKDGYNAIQVTTGFKKRSN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM G ++  +V P + L+EF V    +   VGS F  + F  GQ VDV G++ GKGF
Sbjct: 61  VNKPMAGHYAKASVEPGRGLWEFTVDAAAEY-QVGSSFDATMFEAGQKVDVRGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRHNF    ATHG S+SHR HGSTG  Q PGRVFKNKKMAG +G   VT+++LEVV
Sbjct: 120 QGGVKRHNFATQDATHGNSLSHRVHGSTGQNQTPGRVFKNKKMAGHLGNENVTIQSLEVV 179

Query: 181 SVDDKRGLILVKGCVPGA 198
            VD + GL+L+KG +PG+
Sbjct: 180 RVDAENGLLLLKGGIPGS 197


>gi|300114736|ref|YP_003761311.1| 50S ribosomal protein L3 [Nitrosococcus watsonii C-113]
 gi|299540673|gb|ADJ28990.1| 50S ribosomal protein L3 [Nitrosococcus watsonii C-113]
          Length = 213

 Score =  190 bits (483), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 102/214 (47%), Positives = 145/214 (67%), Gaps = 4/214 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  EG  IPVTV+     ++   +TL+++GY A QV  GE +   
Sbjct: 1   MAIGLIGRKIGMTRVFTDEGASIPVTVIEATPNRISQVKTLERDGYQAAQVTVGERRPAR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFR--VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           V+KP++G F+   V P +KL EFR  +QK+ ++  VG     S F VGQ VDV G+T G+
Sbjct: 61  VTKPLKGHFAKAKVEPGRKLREFRFEIQKEKNI-EVGDELKVSLFEVGQRVDVIGVTRGR 119

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF+G ++R++FGG  A+HG S+SHR+ GS G  Q PGRVFK KKMAG+MG  R TV+NLE
Sbjct: 120 GFAGVVRRYHFGGGDASHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGQMGNVRRTVQNLE 179

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +V VD++R L+L+KG +PGA     ++V+ + KS
Sbjct: 180 LVRVDEERQLLLIKGAIPGAPGGD-VIVKPAVKS 212


>gi|219113447|ref|XP_002186307.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209583157|gb|ACI65777.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 229

 Score =  190 bits (483), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/214 (48%), Positives = 143/214 (66%), Gaps = 5/214 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G +  K+GM  +++  G R P T+L LDN  V+  ++++++GY AVQ+ AG+ K KNV
Sbjct: 16  RCGALGIKVGMMPLFDDWGVRHPCTILFLDNNVVLGQKSIEQHGYWAVQIAAGQRKRKNV 75

Query: 62  SKPMRGFFSSV----NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
              + G +  +    N +P   + EFRV     L+PVG+     +F  GQ VDV+G++ G
Sbjct: 76  GVSVLGQYKHILEDENENPPYLVREFRVSDGAHLVPVGARIHARHFVPGQNVDVSGISKG 135

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF GAMKRHNFGG+ A+HGVS SHR+ GSTG  QDPG+VFK KKMAGRMG  RVTV+NL
Sbjct: 136 KGFQGAMKRHNFGGMPASHGVSKSHRALGSTGQCQDPGKVFKGKKMAGRMGTERVTVQNL 195

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VV VD  R L+ ++G VPG  K +++ +RD+ K
Sbjct: 196 RVVKVDRGRNLLFLEGAVPG-NKGAFVEIRDAVK 228


>gi|254456207|ref|ZP_05069636.1| ribosomal protein L3 [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083209|gb|EDZ60635.1| ribosomal protein L3 [Candidatus Pelagibacter sp. HTCC7211]
          Length = 236

 Score =  190 bits (483), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 100/209 (47%), Positives = 138/209 (66%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
            ++ +K+GMT  +   G+ +PVTVL ++  +VV     +K GY AVQ+G G+ K   ++K
Sbjct: 5   ALMGKKIGMTREFYKTGQLVPVTVLKVEKARVVQVIDEEKRGYKAVQLGYGKIKNSKLTK 64

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
            M+GFF+  N   K+KL E+R+ KD +    G+ F    F   + VD    TIGKGF+GA
Sbjct: 65  AMKGFFAKKNTEAKRKLKEYRI-KDTEAYKEGNEFGLEIFKDIKFVDTRSKTIGKGFAGA 123

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR NFGGLRA+HGVSISHR+HGSTG  QDPG+VFK KKMAG MG    T+ N+E+V  D
Sbjct: 124 MKRWNFGGLRASHGVSISHRAHGSTGHSQDPGKVFKGKKMAGHMGDRLRTMLNIEIVKTD 183

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  L+ +KG +PG+ KN+ + VR S K+
Sbjct: 184 LENELLYLKGSIPGS-KNTEVFVRKSVKN 211


>gi|269792794|ref|YP_003317698.1| 50S ribosomal protein L3 [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100429|gb|ACZ19416.1| ribosomal protein L3 [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 209

 Score =  190 bits (483), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 101/209 (48%), Positives = 137/209 (65%), Gaps = 2/209 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V++ EGR +PVTV+    CQVV  RT +KNGY AVQ+G G  K  +
Sbjct: 1   MSMGILGRKVGMTQVFDAEGRAVPVTVVEAGPCQVVEVRTPEKNGYSAVQLGFGSVKPGS 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++PM+G+F+   V PK+ L EFRV +       G       F+ G+ VDV G++ GKG+
Sbjct: 61  VNRPMKGYFAKNGVEPKRWLREFRVDEGHGYEK-GQYVKVDLFSEGETVDVVGVSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR  FGG  A+HG S  HR  GS+G    PG +FK K M GRMGG RVTVKNL+V 
Sbjct: 120 AGVMKRFGFGGGPASHGSSKFHRQPGSSGANSYPGHIFKGKTMPGRMGGERVTVKNLKVF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +VD +  LIL++G +PGA K+  +L+R +
Sbjct: 180 AVDVENNLILLRGAIPGA-KDGLVLIRKA 207


>gi|146417733|ref|XP_001484834.1| hypothetical protein PGUG_02563 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 279

 Score =  190 bits (482), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 101/210 (48%), Positives = 136/210 (64%), Gaps = 2/210 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  K GM   Y  +G +   TVL +D+C+V+ ++T + +GY AV VG G  K+KN+
Sbjct: 57  RPGLLGIKRGMITWYTEDGNQFAATVLEVDSCEVMANKTKETDGYTAVMVGLG-TKLKNL 115

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +           VSPK+ + EFRV+ +  L+PVG+     YF VGQLVDV+G++ GKGF+
Sbjct: 116 TPDQLRLAQQAGVSPKRSIREFRVRDESGLIPVGTELRADYFAVGQLVDVSGVSKGKGFA 175

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRH F GL+A+HGVS +HRS GSTG  QDPGRV   KKMAG MG    TV N EV+ 
Sbjct: 176 GVIKRHGFAGLQASHGVSKAHRSAGSTGATQDPGRVLPGKKMAGHMGAVNRTVFNNEVLH 235

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            D   G+++VKG VPG  K S I +RD+ K
Sbjct: 236 ADGDAGILVVKGVVPGPNK-SVIKIRDAKK 264


>gi|121706456|ref|XP_001271490.1| 50S ribosomal protein L3 [Aspergillus clavatus NRRL 1]
 gi|119399638|gb|EAW10064.1| 50S ribosomal protein L3 [Aspergillus clavatus NRRL 1]
          Length = 297

 Score =  189 bits (481), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 98/201 (48%), Positives = 135/201 (67%), Gaps = 2/201 (0%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GMT VY+ E G+RI  TVL LD  QVV H+T  ++GY AVQ+GAG     
Sbjct: 72  LRTGAIAIKKGMTAVYDTETGKRIACTVLQLDRVQVVSHKTRQRHGYYAVQLGAGWKHPS 131

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV+K + G FS+  VSPK+ ++EFR++ +  L+PVG + + S+F  GQ VD    + GKG
Sbjct: 132 NVTKSLLGHFSTHGVSPKRHIYEFRIKDESGLVPVGEMINASWFQEGQYVDARSNSKGKG 191

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKRH F G   +HGVS++HRS GS G  Q  G RV+  KKMAG MG  + TV+NL+
Sbjct: 192 FAGVMKRHGFHGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLK 251

Query: 179 VVSVDDKRGLILVKGCVPGAK 199
           ++ VD + G+++V G V G K
Sbjct: 252 ILKVDPENGIVVVNGSVSGPK 272


>gi|321259123|ref|XP_003194282.1| ribosomal large subunit assembly and maintenance-related protein
           [Cryptococcus gattii WM276]
 gi|317460753|gb|ADV22495.1| Ribosomal large subunit assembly and maintenance-related protein,
           putative [Cryptococcus gattii WM276]
          Length = 308

 Score =  189 bits (481), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/222 (46%), Positives = 138/222 (62%), Gaps = 4/222 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG-YMAVQVGAGEAKVK 59
           +R+G++ARK GMT +++ +GRR PVTVL +D  QVV H        Y  +Q+GA   + K
Sbjct: 43  LRTGLIARKRGMTALWDADGRRWPVTVLQVDANQVVRHSPPPPTSPYHTLQIGASPRREK 102

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             +K   G F    V PK +L EF+V   D ++PVG+  S  +F  GQ VDV G+TIGKG
Sbjct: 103 TTTKQQLGHFRKAGVEPKYRLKEFQVS-GDAVVPVGTELSAGHFVPGQFVDVQGVTIGKG 161

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKRH F GL+A+HG S+ HRS GS G  QDPGRV   KKM G MG    T +NL +
Sbjct: 162 FQGVMKRHGFRGLKASHGTSVKHRSGGSIGQNQDPGRVIPGKKMPGHMGNATRTTQNLLI 221

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
             VD    L+ V+GCVPG+  +S++ V+DS K  V  K +++
Sbjct: 222 HRVDHILNLLYVRGCVPGS-DDSFLYVKDS-KKLVKSKAQLA 261


>gi|294654997|ref|XP_002770064.1| DEHA2B02684p [Debaryomyces hansenii CBS767]
 gi|199429613|emb|CAG85072.4| DEHA2B02684p [Debaryomyces hansenii]
          Length = 278

 Score =  189 bits (481), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 97/210 (46%), Positives = 138/210 (65%), Gaps = 2/210 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  K GM   Y  +G++   TV+ +DNC+V+ ++T+D +GY +V +G  + K+KN+
Sbjct: 61  RPGLLGVKRGMITWYTDDGKQFGATVIEIDNCEVIENKTVDTHGYTSVLLGQCD-KLKNI 119

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +      F    VSPKK + EFR++ +  L+PVG+  +  YF VGQLVDV  +T GKGF+
Sbjct: 120 TDKNLRKFQEAGVSPKKHIGEFRIRDESGLIPVGTELTADYFAVGQLVDVKAITKGKGFA 179

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F GL+A+HGVS +HRS GS G  Q PGRV   KKMAGRMGG   TV N EV+ 
Sbjct: 180 GVMKRHGFKGLKASHGVSKAHRSAGSMGATQTPGRVLPGKKMAGRMGGKSCTVFNNEVLH 239

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            D + G I++KG +PG  + S++ + D+ K
Sbjct: 240 ADAEAGFIVLKGQIPGPNR-SFVRISDAQK 268


>gi|88658345|ref|YP_507227.1| 50S ribosomal protein L3 [Ehrlichia chaffeensis str. Arkansas]
 gi|88599802|gb|ABD45271.1| ribosomal protein L3 [Ehrlichia chaffeensis str. Arkansas]
          Length = 231

 Score =  189 bits (480), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 101/214 (47%), Positives = 149/214 (69%), Gaps = 5/214 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+   K+G T +++ EG+RIP+T+LHL +  ++  +T D +GY AV +G  EA + N+
Sbjct: 4   RIGLFLEKVGHTAIFDNEGKRIPITLLHLRDSFIISKKTKDIHGYDAVVLGV-EASI-NL 61

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP         ++ K K+FE RV    D++  G+  S ++F   Q VD+TG ++GKGF+
Sbjct: 62  KKPQSKILEKSKITAKCKIFESRVDNLGDVVE-GAKVSITHFVKDQYVDITGYSLGKGFA 120

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF GL+A+HGVSI+HRS GSTG  QDPGRV+K KKMAG++G ++VTV+NL+V+ 
Sbjct: 121 GVMKRHNFKGLKASHGVSIAHRSQGSTGQCQDPGRVYKGKKMAGQLGNSKVTVQNLKVIL 180

Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAV 214
           VD +R L+ V+G  +PGA K S++ V+D+ K +V
Sbjct: 181 VDQERSLLGVRGNNIPGA-KGSYVFVKDAVKKSV 213


>gi|66805433|ref|XP_636449.1| ribosomal protein L3, mitochondrial [Dictyostelium discoideum AX4]
 gi|60464827|gb|EAL62946.1| ribosomal protein L3, mitochondrial [Dictyostelium discoideum AX4]
          Length = 351

 Score =  189 bits (480), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 101/208 (48%), Positives = 135/208 (64%), Gaps = 2/208 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G + +K+GM   Y I     PVTV+ L N QV   +    +G   +QVGA E K+KNV
Sbjct: 66  RVGAIGKKVGMLTTY-IGDIAYPVTVIQLPNNQVTQIKRKVNDGVDMIQVGADEIKLKNV 124

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SK ++G F+  NV PK+ L EFRV ++   L +G+   P +F  GQL+ V G   GKGF+
Sbjct: 125 SKTLQGHFAKANVPPKRVLMEFRVTRNAMNLELGTPILPKHFLPGQLITVKGTNTGKGFA 184

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR +F G  ATHGVS++HR+ GSTGCRQ PGRVFK +KM GR+GG   TVKNL+V+ 
Sbjct: 185 GGMKRWHFSGQPATHGVSLTHRAIGSTGCRQTPGRVFKGRKMPGRLGGKSCTVKNLQVLK 244

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
           ++ +   +LVKG VPG KK  ++ + DS
Sbjct: 245 INTEMNCLLVKGAVPG-KKGGYLKITDS 271


>gi|145525954|ref|XP_001448788.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124416354|emb|CAK81391.1| unnamed protein product [Paramecium tetraurelia]
          Length = 409

 Score =  189 bits (479), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 97/211 (45%), Positives = 138/211 (65%), Gaps = 4/211 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K+GMT  ++  G R  +TVL LDN QVV  + +  + Y  +QVGAG   +K +
Sbjct: 150 RAGLIAVKVGMTAQWDKWGYRHALTVLQLDNNQVV--QVVKNDTYTGLQVGAGAVNIKTL 207

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP  G F   N+ PKK + EF +   +++LPVG + +  +FT GQ +D+ G++ GKGF 
Sbjct: 208 KKPQIGHFLKANIPPKKYIKEFPI-TPENVLPVGFMLTARHFTPGQYIDIQGISTGKGFG 266

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNF    ATHG S+ HR  GSTG RQDPGRVFK KKM G +G ++VT + +++  
Sbjct: 267 GTVKRHNFKTQPATHGNSLCHRQLGSTGQRQDPGRVFKGKKMPGHLGNDKVTCEAIQIYR 326

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +D  R LI +KG VPG K  S + +RDS+K+
Sbjct: 327 IDAVRQLIYIKGSVPG-KPGSIVYLRDSWKA 356


>gi|238492064|ref|XP_002377269.1| 50S ribosomal protein L3 [Aspergillus flavus NRRL3357]
 gi|220697682|gb|EED54023.1| 50S ribosomal protein L3 [Aspergillus flavus NRRL3357]
          Length = 296

 Score =  188 bits (478), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 97/200 (48%), Positives = 133/200 (66%), Gaps = 2/200 (1%)

Query: 2   RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           R+G +A K GMT +Y+ E G+RI  TVL LD  +V+ H+T  ++GY AVQVG+G     N
Sbjct: 72  RTGAIAIKKGMTALYDTETGKRIACTVLQLDRVEVISHKTRQQHGYFAVQVGSGWKHPNN 131

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++K + G FS   +SPK+ +FEFRV+ ++ LLPVG   +  +F  GQ VD    T GKGF
Sbjct: 132 LTKSLLGHFSVNGISPKRHIFEFRVRDENGLLPVGQAINADWFQEGQYVDARSNTKGKGF 191

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179
           +G MKRH FGG   +HGVS++HRS GS G  Q  G RV+  KKMAG MG  + TV+NL++
Sbjct: 192 AGVMKRHGFGGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLKI 251

Query: 180 VSVDDKRGLILVKGCVPGAK 199
           + VD + G+++V G V G K
Sbjct: 252 LKVDSQNGIVVVNGAVSGPK 271


>gi|119501322|ref|XP_001267418.1| 50S ribosomal protein L3 [Neosartorya fischeri NRRL 181]
 gi|119415583|gb|EAW25521.1| 50S ribosomal protein L3 [Neosartorya fischeri NRRL 181]
          Length = 297

 Score =  188 bits (478), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 101/201 (50%), Positives = 132/201 (65%), Gaps = 2/201 (0%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GMT VY+ E G+RI  TVL LD  QVV H+T   +GY AVQVGAG     
Sbjct: 72  LRTGAIAIKKGMTAVYDAETGKRIACTVLQLDRVQVVSHKTRQTHGYNAVQVGAGWKHPS 131

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV+K + G FS+  VSPK+ ++EFRV+ +  LLPVG   +  +F  GQ VD    + GKG
Sbjct: 132 NVTKSLLGHFSTNGVSPKRHIYEFRVKDESGLLPVGQTINADWFQEGQYVDARSNSKGKG 191

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKRH F G   +HGVS++HRS GS G  Q  G RV+  KKMAG MG  + TV+NL+
Sbjct: 192 FAGVMKRHGFHGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLK 251

Query: 179 VVSVDDKRGLILVKGCVPGAK 199
           V+ VD + G+++V G V G K
Sbjct: 252 VLKVDAENGIVVVNGSVSGPK 272


>gi|258568440|ref|XP_002584964.1| 60S ribosomal protein L9 [Uncinocarpus reesii 1704]
 gi|237906410|gb|EEP80811.1| 60S ribosomal protein L9 [Uncinocarpus reesii 1704]
          Length = 301

 Score =  188 bits (478), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 99/216 (45%), Positives = 142/216 (65%), Gaps = 3/216 (1%)

Query: 2   RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           R+G +A K GM+ +++ E G+R P T+L LD  QV+ H+T +K+GY AVQVG G     N
Sbjct: 73  RTGAIAIKKGMSAIFDPETGKRTPCTILQLDRVQVISHKTREKHGYFAVQVGFGWKNPSN 132

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++PM G F++  VSPK+ + EFRV+ +  LLP+G + +  +F  GQ VDV   + G GF
Sbjct: 133 VTRPMLGHFAANEVSPKRYVHEFRVRDEVGLLPIGQMINADWFQEGQFVDVRSHSRGMGF 192

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179
           +G MKR  FGG   +HGVS++HRS GSTG  Q  G RV+  KKM G MG  +VT +NL+V
Sbjct: 193 TGVMKRWGFGGQDRSHGVSLTHRSLGSTGPSQGGGSRVYPGKKMPGNMGNEQVTTQNLKV 252

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           + VD ++GL++VKG V G K    + ++D+ K  + 
Sbjct: 253 LKVDPEKGLVVVKGSVSGPKGRC-VKIQDAIKKPLQ 287


>gi|169774031|ref|XP_001821484.1| 54S ribosomal protein L9 [Aspergillus oryzae RIB40]
 gi|83769345|dbj|BAE59482.1| unnamed protein product [Aspergillus oryzae]
          Length = 296

 Score =  188 bits (478), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 97/200 (48%), Positives = 133/200 (66%), Gaps = 2/200 (1%)

Query: 2   RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           R+G +A K GMT +Y+ E G+RI  TVL LD  +V+ H+T  ++GY AVQVG+G     N
Sbjct: 72  RTGAIAIKKGMTALYDTETGKRIACTVLQLDRVEVISHKTRQQHGYFAVQVGSGWKHPNN 131

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++K + G FS   +SPK+ +FEFRV+ ++ LLPVG   +  +F  GQ VD    T GKGF
Sbjct: 132 LTKSLLGHFSVNGISPKRHIFEFRVRDENGLLPVGQAINADWFQEGQYVDARSNTKGKGF 191

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179
           +G MKRH FGG   +HGVS++HRS GS G  Q  G RV+  KKMAG MG  + TV+NL++
Sbjct: 192 AGVMKRHGFGGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLKI 251

Query: 180 VSVDDKRGLILVKGCVPGAK 199
           + VD + G+++V G V G K
Sbjct: 252 LKVDSQNGIVVVNGAVSGPK 271


>gi|167626806|ref|YP_001677306.1| 50S ribosomal protein L3 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|241667387|ref|ZP_04754965.1| 50S ribosomal protein L3 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254875936|ref|ZP_05248646.1| 50S ribosomal protein L3 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|189042845|sp|B0U0Y9|RL3_FRAP2 RecName: Full=50S ribosomal protein L3
 gi|167596807|gb|ABZ86805.1| 50S ribosomal protein L3 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|254841957|gb|EET20371.1| 50S ribosomal protein L3 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 210

 Score =  188 bits (477), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 96/198 (48%), Positives = 131/198 (66%), Gaps = 1/198 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++  +G  IPVTV+ +++ +V   +T + +GY A+QV  G  K  N
Sbjct: 1   MSLGLVGRKCGMTRIFTEDGVSIPVTVVQVESNKVTQIKTTETDGYNAIQVTTGFKKRSN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM G ++  +V P + L+EF +    D   VG+    + F  GQ VDV G++ GKGF
Sbjct: 61  VNKPMAGHYAKASVEPGRGLWEFAIDNASDY-EVGASIDATIFEAGQKVDVRGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRHNF    ATHG S+SHR HGSTG  Q PGRVFKNKKMAG +G   VT+++LEVV
Sbjct: 120 QGGVKRHNFATQDATHGNSLSHRVHGSTGQNQTPGRVFKNKKMAGHLGSENVTIQSLEVV 179

Query: 181 SVDDKRGLILVKGCVPGA 198
            VD + GL+L+KG +PG+
Sbjct: 180 RVDAENGLLLLKGGIPGS 197


>gi|312880372|ref|ZP_07740172.1| LSU ribosomal protein L3P [Aminomonas paucivorans DSM 12260]
 gi|310783663|gb|EFQ24061.1| LSU ribosomal protein L3P [Aminomonas paucivorans DSM 12260]
          Length = 209

 Score =  188 bits (477), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 99/209 (47%), Positives = 138/209 (66%), Gaps = 2/209 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V++ EG+ +PVTV+    C VV  RT DKN Y AVQ+G G+ K + 
Sbjct: 1   MSMGILGRKVGMTQVFDAEGKAVPVTVIEAGPCPVVEVRTPDKNQYSAVQLGFGDVKPQR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+RG+++  +V+PK+ L EFRV++       G       F  G+ VDV G++ GKGF
Sbjct: 61  LNKPVRGYYAKQDVAPKRWLREFRVEEGHGF-DKGQEVRADLFAEGETVDVIGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR +FGG  A+HG S  HR  GS+G    PG +FK K M GRMGG RVTVKNL V 
Sbjct: 120 AGVIKRFHFGGGPASHGASKFHRQPGSSGASSYPGHIFKGKTMPGRMGGERVTVKNLRVF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +VD +  LIL++G VPGA K+  +L+R +
Sbjct: 180 AVDVENNLILLRGAVPGA-KDGLVLIRKT 207


>gi|295660136|ref|XP_002790625.1| 54S ribosomal protein L9 [Paracoccidioides brasiliensis Pb01]
 gi|226281500|gb|EEH37066.1| 54S ribosomal protein L9 [Paracoccidioides brasiliensis Pb01]
          Length = 297

 Score =  188 bits (477), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 96/201 (47%), Positives = 134/201 (66%), Gaps = 2/201 (0%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+GV+A K GMT +++ E G+R P T+L LD  QV+ H+TL K+GY AVQVG G    +
Sbjct: 74  LRTGVLAVKKGMTAIFDQETGKRTPCTILQLDQVQVISHKTLKKHGYFAVQVGCGWKHER 133

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            V++PM G F++  V+PK+ + EFRV+ +  LLP+G V +  +F  GQ VD    + G G
Sbjct: 134 AVTRPMLGHFAANGVAPKRHIHEFRVKDESGLLPIGEVINADWFQEGQFVDARSNSRGMG 193

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F G MKRH F G   +HGVS++HRS GS G  Q  G RV   KKMAG MG  +VT++NL+
Sbjct: 194 FEGVMKRHGFHGQDRSHGVSLAHRSLGSAGPSQGGGSRVHPGKKMAGNMGNEQVTLQNLK 253

Query: 179 VVSVDDKRGLILVKGCVPGAK 199
           V+ VD ++G+++V G V G K
Sbjct: 254 VLKVDAEKGIVVVNGSVSGPK 274


>gi|149192608|ref|ZP_01870762.1| 50S ribosomal protein L3 [Vibrio shilonii AK1]
 gi|148833557|gb|EDL50640.1| 50S ribosomal protein L3 [Vibrio shilonii AK1]
          Length = 209

 Score =  188 bits (477), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 101/209 (48%), Positives = 136/209 (65%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT ++  EG  IPVTV+ ++  +V   RTLD +GY A+QV AGE K   VSK
Sbjct: 3   GLVGRKVGMTRIFTEEGVSIPVTVVEVEANRVTQVRTLDTDGYAAIQVTAGEKKASRVSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF GA
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELNVELFNDVKKVDVTGTSKGKGFQGA 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 VKRWNFATQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAIKA 209


>gi|171689544|ref|XP_001909712.1| hypothetical protein [Podospora anserina S mat+]
 gi|170944734|emb|CAP70845.1| unnamed protein product [Podospora anserina S mat+]
          Length = 382

 Score =  187 bits (476), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 96/200 (48%), Positives = 130/200 (65%), Gaps = 1/200 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+GV+A K GMT    + G RIP TVL LD  Q V+++T   +GY AVQVG GE   KN
Sbjct: 83  VRAGVLAIKKGMTAFMGLTGTRIPCTVLQLDRVQTVLNKTRKDHGYWAVQVGFGERDPKN 142

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +  PM G++ +  ++PK++L EF+V+ +  LLPVG    P +F +GQ VDV   + G GF
Sbjct: 143 IGAPMLGYYEAKGIAPKEQLAEFKVRDEKGLLPVGVQLMPDWFYIGQRVDVRSNSRGMGF 202

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179
           +G MKRH F G  A+HG S +HR+ GS G  Q  G RV   KKM GRMG  RVTV+NL +
Sbjct: 203 AGGMKRHGFSGQEASHGNSKNHRTIGSAGPSQGSGSRVLPGKKMPGRMGNQRVTVQNLPI 262

Query: 180 VSVDDKRGLILVKGCVPGAK 199
           + +D+  G+++VKG V G K
Sbjct: 263 LLIDNDLGIVVVKGAVAGPK 282


>gi|302415769|ref|XP_003005716.1| 54S ribosomal protein L9 [Verticillium albo-atrum VaMs.102]
 gi|261355132|gb|EEY17560.1| 54S ribosomal protein L9 [Verticillium albo-atrum VaMs.102]
          Length = 337

 Score =  187 bits (476), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 96/200 (48%), Positives = 134/200 (67%), Gaps = 2/200 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+GV+A K GMT V+ +  +R+P TVL LD  QV+  RT   +GY AVQVG G+ + +N
Sbjct: 80  LRTGVLAIKKGMTSVF-VGKKRVPATVLQLDQVQVLASRTRATHGYWAVQVGLGQKEPRN 138

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++P+ G+F +  V PK+ + EFRV+ +D LLPVG+   P +F  GQ VDV   + G+GF
Sbjct: 139 VTRPLLGYFEARGVFPKRHIAEFRVKGEDGLLPVGAQLRPDWFQKGQYVDVRSNSRGQGF 198

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179
           +G MKRH F G  A+HG S +HR+ G+ G  Q  G RV   KKM GRMG  + TV+NL V
Sbjct: 199 AGGMKRHGFAGQPASHGNSKNHRTMGTAGPSQGSGSRVLPGKKMPGRMGNQQTTVQNLTV 258

Query: 180 VSVDDKRGLILVKGCVPGAK 199
           +SVD++ G+++V G V G K
Sbjct: 259 LSVDNELGIVVVSGPVAGPK 278


>gi|320585734|gb|EFW98413.1| 50S ribosomal protein l3 [Grosmannia clavigera kw1407]
          Length = 376

 Score =  187 bits (476), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 98/212 (46%), Positives = 136/212 (64%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+GV+A K GMT  Y+  G RIP TVL L++ QVV  +T   +GY AVQVG+G  +   
Sbjct: 93  VRTGVLATKRGMTAFYSKSGTRIPCTVLQLEDVQVVATKTRAGHGYWAVQVGSGTRRAAT 152

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+ P+ G++ +  V+PK  L EFRV+    LL  G    P +F VGQ VD   ++ G GF
Sbjct: 153 VAAPLLGYYEAKGVAPKAHLAEFRVRDASGLLTPGVALQPDWFHVGQWVDTRSLSRGFGF 212

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179
           +GAMK+H F G   THG S++HR+ G+TG  Q  G RV   KKM GRMG  RVTV+NL V
Sbjct: 213 AGAMKKHGFKGQNKTHGNSLNHRTMGTTGPSQGSGSRVMPGKKMPGRMGCERVTVQNLNV 272

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           + VD++ G+++VKG V G  K + + ++D+ K
Sbjct: 273 LQVDNELGIVVVKGAV-GGPKGALVRLQDAVK 303


>gi|145517081|ref|XP_001444429.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124411840|emb|CAK77032.1| unnamed protein product [Paramecium tetraurelia]
          Length = 409

 Score =  187 bits (476), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 96/211 (45%), Positives = 137/211 (64%), Gaps = 4/211 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K+GMT  ++  G R  +TVL LDN QVV  + +  + Y  +Q+GAG   +K +
Sbjct: 150 RAGLIAVKVGMTAQWDKWGYRHALTVLQLDNNQVV--QVVKNDTYTGLQIGAGRVNIKTL 207

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP  G F   N+ PKK + EF +   ++ LPVG + +  +FT GQ +D+ G++ GKGF 
Sbjct: 208 KKPQIGHFLKANIPPKKYIKEFPIT-PENTLPVGFMLTARHFTPGQYIDIQGISTGKGFG 266

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNF    ATHG S+ HR  GSTG RQDPGRVFK KKM G +G ++VT + +++  
Sbjct: 267 GTVKRHNFKTQPATHGNSLCHRQLGSTGQRQDPGRVFKGKKMPGHLGNDKVTCEGIQIYR 326

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +D  R LI +KG VPG K  S + +RDS+K+
Sbjct: 327 IDAVRQLIYIKGSVPG-KPGSIVYLRDSWKA 356


>gi|58579302|ref|YP_197514.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Welgevonden]
 gi|58417928|emb|CAI27132.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Welgevonden]
          Length = 236

 Score =  187 bits (476), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 102/214 (47%), Positives = 146/214 (68%), Gaps = 5/214 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  K+G + +++ EG+RIPVT+LHL +  VV  +  D +GY +V  G   +   N+
Sbjct: 9   RIGLLLEKVGHSAIFDNEGKRIPVTLLHLRDSFVVSIKDKDSHGYTSVVFGMKVST--NM 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP        N++   K+FE RV   D+L  VG+    ++F   Q VD+TG ++GKGF+
Sbjct: 67  KKPQLKILQKSNINVNCKIFESRVDHIDNL-TVGAKVLITHFVENQYVDITGCSLGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF GL+A+HGVSISHRS GSTG  QDPGRV+K KKMAG +G +RVTV+N++V+S
Sbjct: 126 GVMKRHNFKGLKASHGVSISHRSQGSTGQCQDPGRVYKGKKMAGHLGNSRVTVQNIKVIS 185

Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAV 214
           VD ++ L++VKG  +PGA + S++ VRD+ K  V
Sbjct: 186 VDKEKSLLVVKGNNIPGA-QGSYLFVRDAIKKPV 218


>gi|242765739|ref|XP_002341035.1| 50S ribosomal protein L3 [Talaromyces stipitatus ATCC 10500]
 gi|218724231|gb|EED23648.1| 50S ribosomal protein L3 [Talaromyces stipitatus ATCC 10500]
          Length = 300

 Score =  187 bits (476), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 102/213 (47%), Positives = 141/213 (66%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G++A K GMT +Y+ E G+R P TVL LD CQV+ H+T+DK+GY AVQVGAG  K +
Sbjct: 72  LRTGLLAIKKGMTGLYDPETGKRTPCTVLQLDRCQVISHKTMDKHGYFAVQVGAGFKKPE 131

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++K + G FS   V+PK+ + EFRV+  + LL +G   +  +F VGQ VD    T GKG
Sbjct: 132 RLTKALVGHFSVNEVAPKRYVHEFRVKDGNGLLEIGHTLTADWFQVGQYVDARSNTKGKG 191

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKRH F G   +HGVS++HRS GS G  Q  G RV+  KKMAG MG  + T++NL+
Sbjct: 192 FAGVMKRHGFHGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNVQNTLQNLK 251

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V+ VD   G+I+V G V G  K   + ++D+ K
Sbjct: 252 VLEVDPANGIIVVNGSVSGP-KGCLVKLQDALK 283


>gi|146323695|ref|XP_752224.2| 50S ribosomal protein L3 [Aspergillus fumigatus Af293]
 gi|129557582|gb|EAL90186.2| 50S ribosomal protein L3 [Aspergillus fumigatus Af293]
 gi|159124862|gb|EDP49979.1| 50S ribosomal protein L3 [Aspergillus fumigatus A1163]
          Length = 317

 Score =  187 bits (475), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 101/201 (50%), Positives = 131/201 (65%), Gaps = 2/201 (0%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GMT VY+ E G+RI  TVL LD  QVV H+T   +GY AVQVGAG     
Sbjct: 92  LRTGAIAIKKGMTAVYDAETGKRIACTVLQLDRVQVVSHKTRQTHGYNAVQVGAGWKHPS 151

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV+K + G FS+  VSPK+ ++EFRV+ +  LLPVG   +  +F  GQ VD    + GKG
Sbjct: 152 NVTKSLLGHFSTNGVSPKRHVYEFRVKDESGLLPVGQTINADWFQEGQYVDARSYSKGKG 211

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKRH F G   +HGVS++HRS GS G  Q  G RV+  KKMAG MG  + TV+NL+
Sbjct: 212 FAGVMKRHGFHGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLK 271

Query: 179 VVSVDDKRGLILVKGCVPGAK 199
           V+ VD   G+++V G V G K
Sbjct: 272 VLKVDADNGIVVVNGSVSGPK 292


>gi|57239336|ref|YP_180472.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Welgevonden]
 gi|57161415|emb|CAH58339.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Welgevonden]
          Length = 231

 Score =  187 bits (475), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 102/214 (47%), Positives = 146/214 (68%), Gaps = 5/214 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  K+G + +++ EG+RIPVT+LHL +  VV  +  D +GY +V  G   +   N+
Sbjct: 4   RIGLLLEKVGHSAIFDNEGKRIPVTLLHLRDSFVVSIKDKDSHGYTSVVFGMKVST--NM 61

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP        N++   K+FE RV   D+L  VG+    ++F   Q VD+TG ++GKGF+
Sbjct: 62  KKPQLKILQKSNINVNCKIFESRVDHIDNL-TVGAKVLITHFVENQYVDITGCSLGKGFA 120

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF GL+A+HGVSISHRS GSTG  QDPGRV+K KKMAG +G +RVTV+N++V+S
Sbjct: 121 GVMKRHNFKGLKASHGVSISHRSQGSTGQCQDPGRVYKGKKMAGHLGNSRVTVQNIKVIS 180

Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAV 214
           VD ++ L++VKG  +PGA + S++ VRD+ K  V
Sbjct: 181 VDKEKSLLVVKGNNIPGA-QGSYLFVRDAIKKPV 213


>gi|149919182|ref|ZP_01907665.1| 50S ribosomal protein L3 [Plesiocystis pacifica SIR-1]
 gi|149819896|gb|EDM79318.1| 50S ribosomal protein L3 [Plesiocystis pacifica SIR-1]
          Length = 223

 Score =  187 bits (475), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 102/215 (47%), Positives = 133/215 (61%), Gaps = 2/215 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT  Y  +G R+PVTVL      V  HRT++++GY A+Q+   + K   +SK
Sbjct: 6   GLLTKKIGMTEFYKEDGTRVPVTVLLAKGNVVTAHRTVERDGYTALQLAFDDQKASRLSK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P  G F    VSPK+K+ EFRV  D      VGS    S F+ GQLVDVTG + GKGF G
Sbjct: 66  PKLGQFKKAEVSPKRKIKEFRVAADVVAQHAVGSEVDVSIFSDGQLVDVTGTSKGKGFQG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH   G + THG    +R  GS GCR  PGRV   K+MAG+MG   VTV+NLEV  V
Sbjct: 126 VMKRHGMRGEKRTHGQHEVYRHGGSIGCRLTPGRVIPGKRMAGQMGNETVTVQNLEVAKV 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
              +GLILVKG +PG  KN ++ +R + K+A+  K
Sbjct: 186 IADKGLILVKGAIPGG-KNGYVQIRHAIKAAIRTK 219


>gi|299753327|ref|XP_001833202.2| ribosomal protein L3 [Coprinopsis cinerea okayama7#130]
 gi|298410250|gb|EAU88475.2| ribosomal protein L3 [Coprinopsis cinerea okayama7#130]
          Length = 257

 Score =  187 bits (475), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 99/203 (48%), Positives = 129/203 (63%), Gaps = 5/203 (2%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVH---RTLDKNGYMAVQVGAGEAKVKNVSKPMRGF 68
           M  ++N +G + PVTVL LDNCQV  +      D   Y AVQV + +   K  ++ M G 
Sbjct: 1   MAALWNDQGVKFPVTVLQLDNCQVTANIKTPRPDHTVYHAVQVASTDRPPKTTTRQMLGH 60

Query: 69  FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
           F+  NV PK+ + EF V  D  + PVG+  + ++F  GQ VDV   +IGKGF G MKR  
Sbjct: 61  FAKANVPPKRYVKEFPVTADAHV-PVGTTLNAAHFVPGQYVDVVAKSIGKGFQGGMKRWG 119

Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188
           F GL A+HGVS+SHRS GS G  QDPGR++  KKMAGRMGGN+VTV+NL VV VD    L
Sbjct: 120 FHGLAASHGVSVSHRSSGSAGNSQDPGRIYPGKKMAGRMGGNQVTVQNLAVVRVDTALNL 179

Query: 189 ILVKGCVPGAKKNSWILVRDSFK 211
           + V+G VPG   N+ + +RD+ K
Sbjct: 180 VYVRGAVPGV-DNAPVYIRDAKK 201


>gi|85110563|ref|XP_963521.1| 60S ribosomal protein L3, mitochondrial precursor [Neurospora
           crassa OR74A]
 gi|28881355|emb|CAD70397.1| related to ribosomal protein L3 precursor, mitochondrial
           [Neurospora crassa]
 gi|28925204|gb|EAA34285.1| 60S ribosomal protein L3, mitochondrial precursor [Neurospora
           crassa OR74A]
          Length = 384

 Score =  187 bits (475), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 101/214 (47%), Positives = 137/214 (64%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+GV+A K GMT      G RIP TVL LD  QVV ++T  KNGY AVQVG GE + +N
Sbjct: 106 LRTGVLAVKKGMTVFMGRTGARIPCTVLQLDRVQVVANKTRAKNGYWAVQVGLGERRAEN 165

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V  P  G++ +  + PK+ L EF+V+  D LLPVG    P +F VGQ+VDV G+T G GF
Sbjct: 166 VGAPQLGYYEAKGIPPKQTLAEFKVRNQDGLLPVGVQLFPDWFHVGQVVDVRGITRGMGF 225

Query: 121 SGAMKRHNFGGLRATHGVSISHRS-HGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           +G MKRH F G  A+HG S++HR+     G +    RV   KKM GRMG  + TV+NL +
Sbjct: 226 AGGMKRHGFAGQEASHGNSLNHRTIGSVGGSQGSGSRVLPGKKMPGRMGAQQHTVQNLPI 285

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           + VD++ G+++VKG V G  K + + V+D+ K A
Sbjct: 286 LMVDNELGIVVVKGAVAG-HKGAVVKVQDAVKKA 318


>gi|220935492|ref|YP_002514391.1| ribosomal protein L3 [Thioalkalivibrio sp. HL-EbGR7]
 gi|254803700|sp|B8GV58|RL3_THISH RecName: Full=50S ribosomal protein L3
 gi|219996802|gb|ACL73404.1| ribosomal protein L3 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 214

 Score =  187 bits (475), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 102/213 (47%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RKLGMT V+  +G  +PVTV+ +D  +V   +T +++GY A+QV  G  K   
Sbjct: 1   MAIGLVGRKLGMTRVFTEDGASLPVTVIEVDPNRVTQVKTEERDGYRALQVTTGARKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP  G F+   V   + L+EFR+  D    +  G+      F  GQ+VDVTG++ GKG
Sbjct: 61  VTKPRAGHFAKAGVEAGRGLWEFRLDGDQGAEIETGAELKVDIFEAGQIVDVTGISKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KRHNF    ATHG S+SHR+ GS G  Q PGRVFK KKMAG MG  R TV+NLEV
Sbjct: 121 FQGVIKRHNFSMQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHMGNERCTVQNLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+L+KG VPG+   + +LVR   K+
Sbjct: 181 VRVDVERNLLLIKGAVPGSTGGN-VLVRPGVKA 212


>gi|320094580|ref|ZP_08026346.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319978495|gb|EFW10072.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 221

 Score =  187 bits (475), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 95/209 (45%), Positives = 135/209 (64%), Gaps = 2/209 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RK+GMT V++ +GR +P+TV+ +    V   RT + +GY A+Q+G GE   + V+KP
Sbjct: 15  LLGRKIGMTQVWDADGRLVPLTVVQVGTNVVTQVRTEEVDGYSAIQLGFGEIDPRKVTKP 74

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           ++G F+   V+P++ L E R  + D    VG     S F  GQ VDV+G T GKGF+G M
Sbjct: 75  LQGHFAKAGVAPRRHLAEVRTSEHDSY-EVGQELDASTFEAGQSVDVSGNTKGKGFAGVM 133

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH F G+ A+HG   +HR  GS G    PGR+FK  +MAGRMGGNR TV+NL + +VD 
Sbjct: 134 KRHGFAGVSASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGGNRRTVQNLRIQAVDT 193

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           ++GL+L+ G +PG  KN  +LVR + K A
Sbjct: 194 EKGLLLISGAIPG-PKNGVVLVRSAVKGA 221


>gi|192360421|ref|YP_001981208.1| 50S ribosomal protein L3 [Cellvibrio japonicus Ueda107]
 gi|226725144|sp|B3PK37|RL3_CELJU RecName: Full=50S ribosomal protein L3
 gi|190686586|gb|ACE84264.1| ribosomal protein L3 [Cellvibrio japonicus Ueda107]
          Length = 214

 Score =  187 bits (475), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 100/216 (46%), Positives = 134/216 (62%), Gaps = 2/216 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT V+  +G  IPVTV+ ++  +V   +T D +GY AVQ+  GE +   
Sbjct: 1   MTIGIVGRKTGMTRVFTDDGVSIPVTVIEVEPNRVTQVKTADTDGYSAVQITVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+  NV   + ++E R     +   VG+  +   F+ GQ +DVTG + GKG+
Sbjct: 61  VTKSEAGHFAKANVEAGRSVWELR-NNSQEAFEVGASLTVEAFSAGQFIDVTGTSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NFG   ATHG S SHR  GSTG  Q PGRVFKNKKM G MG  RVTV+NLE+V
Sbjct: 120 AGTVKRWNFGMQDATHGNSRSHRVPGSTGQCQSPGRVFKNKKMTGHMGAERVTVQNLEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            VD +R L+LVKG +PGA     ++VR + K+  N 
Sbjct: 180 RVDAERNLLLVKGAIPGAPGGD-VIVRPAVKARTNA 214


>gi|226293678|gb|EEH49098.1| 54S ribosomal protein L9 [Paracoccidioides brasiliensis Pb18]
          Length = 295

 Score =  187 bits (475), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/201 (47%), Positives = 133/201 (66%), Gaps = 2/201 (0%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+GV+A K GMT +++ E G+R P T+L LD  QV+ H+TL K+GY AVQVG G    +
Sbjct: 72  LRTGVLAIKKGMTAIFDQETGKRTPCTILQLDQVQVISHKTLKKHGYFAVQVGCGWKHER 131

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            V++PM G F++  V+PK+ + EFRV+ +  LLP+G V +  +F  GQ VD    + G G
Sbjct: 132 AVTRPMLGHFAANGVAPKRHIHEFRVKDESGLLPIGEVINADWFQEGQFVDARSNSRGMG 191

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F G MKRH F G   +HGVS++HRS GS G  Q  G RV   KKMAG MG  +VT++NL 
Sbjct: 192 FEGVMKRHGFHGQDRSHGVSLAHRSLGSAGPSQGGGSRVHPGKKMAGNMGNEQVTLQNLR 251

Query: 179 VVSVDDKRGLILVKGCVPGAK 199
           V+ VD ++G+++V G V G K
Sbjct: 252 VLKVDAEKGIVVVNGSVSGPK 272


>gi|104779755|ref|YP_606253.1| 50S ribosomal protein L3 [Pseudomonas entomophila L48]
 gi|123079277|sp|Q1IFW6|RL3_PSEE4 RecName: Full=50S ribosomal protein L3
 gi|95108742|emb|CAK13436.1| 50S ribosomal subunit protein L3 [Pseudomonas entomophila L48]
          Length = 211

 Score =  187 bits (475), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 135/212 (63%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKAGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + ++EFR+++ D     G +     FT GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRGVWEFRLEEGD--FQAGDLIKAELFTAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA     ++VR + K+
Sbjct: 179 RVDAERNLLLIKGAVPGATGGD-VVVRPAVKA 209


>gi|260942335|ref|XP_002615466.1| hypothetical protein CLUG_04349 [Clavispora lusitaniae ATCC 42720]
 gi|238850756|gb|EEQ40220.1| hypothetical protein CLUG_04349 [Clavispora lusitaniae ATCC 42720]
          Length = 279

 Score =  187 bits (474), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 97/198 (48%), Positives = 131/198 (66%), Gaps = 1/198 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  K  M   +   G +   TV+ +D+C+V+ +++++K+GY AV +G  + K+KNV
Sbjct: 61  RPGLLGIKRDMITWFTESGEQFGATVIEVDSCEVIANKSVEKDGYSAVLMGQVD-KLKNV 119

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           S+      S   VSPK K  EFRV+ DD ++  G+  +  YF VGQLVDV  ++ GKGF+
Sbjct: 120 SRYHVKLCSDAGVSPKAKFGEFRVRTDDGIISPGTEITADYFAVGQLVDVKAVSKGKGFA 179

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F GLRATHGVS+SHRS GS G  QDPGRV   KKMAGRMGG   TV N EV+ 
Sbjct: 180 GVMKRHGFKGLRATHGVSVSHRSAGSMGATQDPGRVLPGKKMAGRMGGRNCTVFNNEVLH 239

Query: 182 VDDKRGLILVKGCVPGAK 199
            D + G+++VKG +PG K
Sbjct: 240 ADGEAGILVVKGQIPGPK 257


>gi|292492421|ref|YP_003527860.1| ribosomal protein L3 [Nitrosococcus halophilus Nc4]
 gi|291581016|gb|ADE15473.1| ribosomal protein L3 [Nitrosococcus halophilus Nc4]
          Length = 216

 Score =  187 bits (474), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/215 (46%), Positives = 141/215 (65%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RKLGMT V+  EG  IPVTV+     ++   +TL+++ Y A+QV  GE +   
Sbjct: 1   MAIGLVGRKLGMTRVFTDEGESIPVTVIEATPNRISQIKTLERDSYRALQVTLGEKRPSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP++G F+   V P +KL EFR+ + +      GS      F  GQ VDVTG T G+G
Sbjct: 61  VTKPLKGHFAKAGVEPGRKLHEFRLAEGEGADAEAGSELKVGLFEAGQKVDVTGTTRGRG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G ++R+ FGG  A+HG S+SHR+ GS G  Q PGRVFK KKMAG+MG  + TV+NLE+
Sbjct: 121 FAGVVRRYRFGGGDASHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGQMGNVQRTVQNLEL 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           V VD++R L+LVKG +PGA     ++V+ + K+AV
Sbjct: 181 VRVDEERHLLLVKGAIPGAPGGD-VVVKPAAKAAV 214


>gi|312212003|emb|CBX92087.1| similar to 50S ribosomal protein L3 [Leptosphaeria maculans]
          Length = 328

 Score =  187 bits (474), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/212 (49%), Positives = 139/212 (65%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G++A K GMT +Y+ E G+R   TVL LD  +V+ H+  DKNGY AVQVGAGE   K
Sbjct: 82  LRTGLLANKKGMTAMYDPETGKRTACTVLQLDRNEVIAHKRRDKNGYWAVQVGAGEKLPK 141

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           NV+KPM G F+   VSPK+ + EF+V+ +  L +PVGS+    +F VGQ VDV G++ G 
Sbjct: 142 NVTKPMLGHFAGAAVSPKRWVAEFKVRDEAGLGVPVGSMVGAGWFNVGQWVDVKGISRGM 201

Query: 119 GFSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           GF+G MKRH FGG  A+HG S+ HR    + G +    RV   K+MAG MG   VTVKNL
Sbjct: 202 GFAGGMKRHGFGGQPASHGQSLMHRGMGSAGGSQGSGSRVLPGKRMAGNMGNESVTVKNL 261

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +V+ VD   G+++V G VPG  KN  I V D+
Sbjct: 262 KVLQVDAANGILVVTGAVPGP-KNQIIRVSDA 292


>gi|225678845|gb|EEH17129.1| 50S ribosomal protein L3 [Paracoccidioides brasiliensis Pb03]
          Length = 295

 Score =  187 bits (474), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/201 (47%), Positives = 133/201 (66%), Gaps = 2/201 (0%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+GV+A K GMT +++ E G+R P T+L LD  QV+ H+TL K+GY AVQVG G    +
Sbjct: 72  LRTGVLAIKKGMTAIFDQETGKRTPCTILQLDQVQVISHKTLKKHGYFAVQVGCGWKHER 131

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            V++PM G F++  V+PK+ + EFRV+ +  LLP+G V +  +F  GQ VD    + G G
Sbjct: 132 AVTRPMLGHFAANGVAPKRHIHEFRVKDESGLLPIGEVINADWFQEGQFVDARSNSRGMG 191

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F G MKRH F G   +HGVS++HRS GS G  Q  G RV   KKMAG MG  +VT++NL 
Sbjct: 192 FEGVMKRHGFHGQDRSHGVSLAHRSLGSAGPSQGGGSRVHPGKKMAGNMGNEQVTLQNLR 251

Query: 179 VVSVDDKRGLILVKGCVPGAK 199
           V+ VD ++G+++V G V G K
Sbjct: 252 VLKVDAEKGIVVVNGSVSGPK 272


>gi|58617356|ref|YP_196555.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Gardel]
 gi|58416968|emb|CAI28081.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Gardel]
          Length = 235

 Score =  186 bits (473), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 100/214 (46%), Positives = 147/214 (68%), Gaps = 5/214 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  K+G + +++ EG+RIPVT+LHL +  VV  +  D +GY +V  G   +   N+
Sbjct: 8   RIGLLLEKVGHSAIFDNEGKRIPVTLLHLRDSFVVSIKDKDSHGYTSVVFGMKVST--NM 65

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP        N++   K+FE RV   D+L+ VG+    ++F   Q VD+TG ++GKGF+
Sbjct: 66  KKPQLKILQKSNINVNCKIFESRVDHIDNLV-VGAKVLITHFVENQYVDITGHSLGKGFA 124

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF GL+A+HGVSISHRS GSTG  QDPGRV+K KKMAG +G ++VTV+N++V+S
Sbjct: 125 GVMKRHNFKGLKASHGVSISHRSQGSTGQCQDPGRVYKGKKMAGHLGNSKVTVQNIKVIS 184

Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAV 214
           VD ++ L++VKG  +PGA + S++ VRD+ K  +
Sbjct: 185 VDKEKSLLVVKGNNIPGA-QGSYLFVRDAIKKPI 217


>gi|330430101|gb|AEC21435.1| 50S ribosomal protein L3 [Pusillimonas sp. T7-7]
          Length = 229

 Score =  186 bits (473), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+V RK+GMT ++  EG  IPVTVL + N +V   ++ + +GY AVQV  G  +   V
Sbjct: 12  RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQVKSPETDGYAAVQVAYGTRRASRV 71

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQ--KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP  G ++         L EFR+   K  +      V   S F  GQ VDVTG TIGKG
Sbjct: 72  TKPQAGHYAKAGAEAGSILKEFRLDPAKAAEFTAGAVVAVESVFEAGQKVDVTGTTIGKG 131

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KRH+F G R +HG S+SHR+ GSTG  QDPGRVF  KKM+G +G    TV+NL++
Sbjct: 132 YAGTIKRHHFAGQRNSHGNSVSHRAPGSTGMAQDPGRVFPGKKMSGHLGDATRTVQNLDI 191

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +RGL+LVKG VPG  KN+ I+VR + K
Sbjct: 192 VRVDAERGLLLVKGAVPG-HKNADIVVRPAIK 222


>gi|307823442|ref|ZP_07653671.1| 50S ribosomal protein L3 [Methylobacter tundripaludum SV96]
 gi|307735427|gb|EFO06275.1| 50S ribosomal protein L3 [Methylobacter tundripaludum SV96]
          Length = 216

 Score =  186 bits (473), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 99/200 (49%), Positives = 134/200 (67%), Gaps = 1/200 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK GMT V+  +G  +PVTVL +D+ +V   + ++ +GY ++QV AG+ K   
Sbjct: 1   MSIGLIGRKCGMTRVFCEDGSSVPVTVLQIDSNRVTQVKGIEVDGYRSIQVAAGDKKSSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K M G +++ NV+  + L+EFR++  + + L VGS  S   F+ GQ+VDV G +IGKG
Sbjct: 61  VNKAMAGHYAAANVTAGRGLWEFRLEDGEGEDLSVGSQLSLDVFSAGQVVDVQGKSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRHNF    ATHG S SHR  GS G  Q PGRVFK KKM G MG  +VTV+NL +
Sbjct: 121 FAGGIKRHNFSMQDATHGNSRSHRVLGSIGMCQTPGRVFKGKKMEGHMGAEKVTVQNLTI 180

Query: 180 VSVDDKRGLILVKGCVPGAK 199
            S+D  R LILVKG VPGAK
Sbjct: 181 HSIDTARNLILVKGAVPGAK 200


>gi|300775014|ref|ZP_07084877.1| 50S ribosomal protein L3 [Chryseobacterium gleum ATCC 35910]
 gi|300506829|gb|EFK37964.1| 50S ribosomal protein L3 [Chryseobacterium gleum ATCC 35910]
          Length = 208

 Score =  186 bits (473), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 99/206 (48%), Positives = 136/206 (66%), Gaps = 3/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT ++N EG+ IP TV+    C V+  RTL+K+GY AVQ+G  +   KNV 
Sbjct: 2   SGIIGKKIGMTSLFNEEGKNIPCTVIQAGPCSVLQVRTLEKDGYKAVQLGFDDKSEKNVG 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K + G F     +PK KL EF  +  D++  VG       F  G+ VDVTG + GKGF G
Sbjct: 62  KALAGHFKKAGSAPKAKLVEFYREFVDEV-KVGEEVKVDLFAEGEYVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG ++ATHG     R+ GS G   DP RVFK  +MAGRMGG +VTV+NL+V+ 
Sbjct: 121 VVKRHGFGGVMQATHGQHNRLRAPGSIGAGSDPSRVFKGMRMAGRMGGKQVTVQNLQVLK 180

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           VD ++ L++VKG VPGA KNS++++R
Sbjct: 181 VDQEQNLLVVKGAVPGA-KNSYVIIR 205


>gi|145356307|ref|XP_001422374.1| Putative mitochondrial ribosomal protein L3 [Ostreococcus
           lucimarinus CCE9901]
 gi|144582616|gb|ABP00691.1| Putative mitochondrial ribosomal protein L3 [Ostreococcus
           lucimarinus CCE9901]
          Length = 211

 Score =  186 bits (472), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/211 (48%), Positives = 133/211 (63%), Gaps = 3/211 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVKN 60
           R+G VA K GMTC ++  G RIP+TVL +D+C+VV  +T    +GY AVQVG G  K K 
Sbjct: 2   RTGAVAIKTGMTCDWDARGTRIPLTVLWIDDCEVVAAKTSSGADGYDAVQVGYGSRKPKQ 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G+F     + K+ L EFR   D  L P G+  + ++F  GQ VDV G+T GKGF
Sbjct: 62  VTKAELGYFVRRKTNIKRALCEFRTSADGVLAP-GTAITAAHFAAGQYVDVQGVTKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G MKR  F G  A+HG +  HR+HGS G  QDPGRVFK KKMAGRMGG   TV++  V 
Sbjct: 121 QGPMKRWGFSGQPASHGNTKKHRAHGSIGQCQDPGRVFKGKKMAGRMGGRTRTVQSAYVY 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD ++ L+ VKG VPG    + + +RDS +
Sbjct: 181 KVDTEKNLVYVKGQVPGNAGMA-VKIRDSLR 210


>gi|126453776|ref|YP_001068034.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1106a]
 gi|134283182|ref|ZP_01769883.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 305]
 gi|217424706|ref|ZP_03456203.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 576]
 gi|237814145|ref|YP_002898596.1| 50S ribosomal protein L3 [Burkholderia pseudomallei MSHR346]
 gi|238563921|ref|ZP_00438031.2| 50S ribosomal protein L3 [Burkholderia mallei GB8 horse 4]
 gi|242314689|ref|ZP_04813705.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1106b]
 gi|251767493|ref|ZP_02267491.2| 50S ribosomal protein L3 [Burkholderia mallei PRL-20]
 gi|254174782|ref|ZP_04881443.1| 50S ribosomal protein L3 [Burkholderia mallei ATCC 10399]
 gi|254198510|ref|ZP_04904931.1| 50S ribosomal protein L3 [Burkholderia pseudomallei S13]
 gi|254201239|ref|ZP_04907603.1| 50S ribosomal protein L3 [Burkholderia mallei FMH]
 gi|254206580|ref|ZP_04912931.1| 50S ribosomal protein L3 [Burkholderia mallei JHU]
 gi|254260454|ref|ZP_04951508.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1710a]
 gi|254300578|ref|ZP_04968023.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 406e]
 gi|254357118|ref|ZP_04973392.1| 50S ribosomal protein L3 [Burkholderia mallei 2002721280]
 gi|212288252|sp|A3P0B3|RL3_BURP0 RecName: Full=50S ribosomal protein L3
 gi|126227418|gb|ABN90958.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1106a]
 gi|134245377|gb|EBA45470.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 305]
 gi|147747133|gb|EDK54209.1| 50S ribosomal protein L3 [Burkholderia mallei FMH]
 gi|147752122|gb|EDK59188.1| 50S ribosomal protein L3 [Burkholderia mallei JHU]
 gi|148026182|gb|EDK84267.1| 50S ribosomal protein L3 [Burkholderia mallei 2002721280]
 gi|157810515|gb|EDO87685.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 406e]
 gi|160695827|gb|EDP85797.1| 50S ribosomal protein L3 [Burkholderia mallei ATCC 10399]
 gi|169655250|gb|EDS87943.1| 50S ribosomal protein L3 [Burkholderia pseudomallei S13]
 gi|217392162|gb|EEC32187.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 576]
 gi|237506368|gb|ACQ98686.1| 50S ribosomal protein L3 [Burkholderia pseudomallei MSHR346]
 gi|238519676|gb|EEP83145.1| 50S ribosomal protein L3 [Burkholderia mallei GB8 horse 4]
 gi|242137928|gb|EES24330.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1106b]
 gi|243062596|gb|EES44782.1| 50S ribosomal protein L3 [Burkholderia mallei PRL-20]
 gi|254219143|gb|EET08527.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1710a]
          Length = 223

 Score =  186 bits (472), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 97/200 (48%), Positives = 128/200 (64%), Gaps = 1/200 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 5   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 64

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR++ D    L  G+V  P  F VGQ VDV G++IGKG
Sbjct: 65  VTKPLAGHLAKAGVEAGEILKEFRIEADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKG 124

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NFG  RA+HG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 125 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 184

Query: 180 VSVDDKRGLILVKGCVPGAK 199
             +D  R L+LVKG VPGAK
Sbjct: 185 ARIDADRKLLLVKGAVPGAK 204


>gi|282857362|ref|ZP_06266599.1| 50S ribosomal protein L3 [Pyramidobacter piscolens W5455]
 gi|282584862|gb|EFB90193.1| 50S ribosomal protein L3 [Pyramidobacter piscolens W5455]
          Length = 208

 Score =  186 bits (472), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 96/206 (46%), Positives = 133/206 (64%), Gaps = 2/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT V+N  G+ +PVTV+    C VV  RT +KNGY A+ +G GE K + 
Sbjct: 1   MSLGILGQKLGMTRVFNEAGQSVPVTVIAAGPCPVVDVRTPEKNGYSAILLGLGERKPRK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G +    V P + L EFR++   +    G +   + F  G+ V VTG + GKGF
Sbjct: 61  VTKPLQGMYDRCGVRPCRWLREFRIENSAEY-KAGQIVDVAVFAEGETVSVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGL+A+HGVS+SHR   S+G    P  +FK K M G +G  RVT+KNL VV
Sbjct: 120 AGVMKRWNFGGLQASHGVSVSHRKPASSGASSYPSHIFKGKAMPGHLGNERVTIKNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
           +VD +  L+L+KG VPGA KN  +L+
Sbjct: 180 AVDKENNLLLIKGAVPGA-KNGLVLI 204


>gi|119899706|ref|YP_934919.1| 50S ribosomal protein L3 [Azoarcus sp. BH72]
 gi|166233115|sp|A1KB27|RL3_AZOSB RecName: Full=50S ribosomal protein L3
 gi|119672119|emb|CAL96033.1| 50S ribosomal protein L3 [Azoarcus sp. BH72]
          Length = 212

 Score =  186 bits (472), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 104/213 (48%), Positives = 137/213 (64%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +GR IPVTVL + + +V   +T + +GY AVQV  G+ +   
Sbjct: 1   MSLGLVGRKVGMTRIFADDGRSIPVTVLDVSDNKVTQIKTPEADGYSAVQVAFGKRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V KP+ G  +   V P + L EFRV+ +    L  G   S   F+VGQ VDVTG++IGKG
Sbjct: 61  VVKPIAGHLAKAGVEPSRVLKEFRVEPEGLASLKAGDQVSVEIFSVGQKVDVTGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNF   RA+HG S+SH S GS G  QDPGRVF  K+MAG+ G  + T   LEV
Sbjct: 121 FSGPIKRHNFSSNRASHGNSVSHNSPGSIGMAQDPGRVFPGKRMAGQYGAVQRTTLGLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LVKG VPGAK    ++VR + K+
Sbjct: 181 VRVDAERQLLLVKGAVPGAKGGD-VVVRPAIKA 212


>gi|53720821|ref|YP_109807.1| 50S ribosomal protein L3 [Burkholderia pseudomallei K96243]
 gi|53723854|ref|YP_104166.1| 50S ribosomal protein L3 [Burkholderia mallei ATCC 23344]
 gi|76808912|ref|YP_335140.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1710b]
 gi|121599817|ref|YP_994456.1| 50S ribosomal protein L3 [Burkholderia mallei SAVP1]
 gi|124384577|ref|YP_001027895.1| 50S ribosomal protein L3 [Burkholderia mallei NCTC 10229]
 gi|126441597|ref|YP_001060750.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 668]
 gi|126449489|ref|YP_001082990.1| 50S ribosomal protein L3 [Burkholderia mallei NCTC 10247]
 gi|167721577|ref|ZP_02404813.1| 50S ribosomal protein L3 [Burkholderia pseudomallei DM98]
 gi|167740551|ref|ZP_02413325.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 14]
 gi|167817756|ref|ZP_02449436.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 91]
 gi|167826153|ref|ZP_02457624.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 9]
 gi|167847665|ref|ZP_02473173.1| 50S ribosomal protein L3 [Burkholderia pseudomallei B7210]
 gi|167896237|ref|ZP_02483639.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 7894]
 gi|167904619|ref|ZP_02491824.1| 50S ribosomal protein L3 [Burkholderia pseudomallei NCTC 13177]
 gi|167912884|ref|ZP_02499975.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 112]
 gi|167920844|ref|ZP_02507935.1| 50S ribosomal protein L3 [Burkholderia pseudomallei BCC215]
 gi|254180339|ref|ZP_04886937.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1655]
 gi|254190302|ref|ZP_04896810.1| 50S ribosomal protein L3 [Burkholderia pseudomallei Pasteur 52237]
 gi|81823913|sp|Q62GK5|RL3_BURMA RecName: Full=50S ribosomal protein L3
 gi|81824632|sp|Q63Q11|RL3_BURPS RecName: Full=50S ribosomal protein L3
 gi|109893415|sp|Q3JMR3|RL3_BURP1 RecName: Full=50S ribosomal protein L3
 gi|166233124|sp|A3MRV4|RL3_BURM7 RecName: Full=50S ribosomal protein L3
 gi|166233125|sp|A2S7H6|RL3_BURM9 RecName: Full=50S ribosomal protein L3
 gi|166233126|sp|A1V8A3|RL3_BURMS RecName: Full=50S ribosomal protein L3
 gi|166233127|sp|A3NEH9|RL3_BURP6 RecName: Full=50S ribosomal protein L3
 gi|52211235|emb|CAH37224.1| 50S ribosomal protein L3 [Burkholderia pseudomallei K96243]
 gi|52427277|gb|AAU47870.1| ribosomal protein L3 [Burkholderia mallei ATCC 23344]
 gi|76578365|gb|ABA47840.1| ribosomal protein L3 [Burkholderia pseudomallei 1710b]
 gi|121228627|gb|ABM51145.1| 50S ribosomal protein L3 [Burkholderia mallei SAVP1]
 gi|124292597|gb|ABN01866.1| 50S ribosomal protein L3 [Burkholderia mallei NCTC 10229]
 gi|126221090|gb|ABN84596.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 668]
 gi|126242359|gb|ABO05452.1| 50S ribosomal protein L3 [Burkholderia mallei NCTC 10247]
 gi|157937978|gb|EDO93648.1| 50S ribosomal protein L3 [Burkholderia pseudomallei Pasteur 52237]
 gi|184210878|gb|EDU07921.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1655]
          Length = 219

 Score =  186 bits (472), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 97/200 (48%), Positives = 128/200 (64%), Gaps = 1/200 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR++ D    L  G+V  P  F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEILKEFRIEADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NFG  RA+HG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAK 199
             +D  R L+LVKG VPGAK
Sbjct: 181 ARIDADRKLLLVKGAVPGAK 200


>gi|260655383|ref|ZP_05860871.1| 50S ribosomal protein L3 [Jonquetella anthropi E3_33 E1]
 gi|260629831|gb|EEX48025.1| 50S ribosomal protein L3 [Jonquetella anthropi E3_33 E1]
          Length = 207

 Score =  186 bits (472), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 104/203 (51%), Positives = 132/203 (65%), Gaps = 2/203 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT VY+ EGR IPVTV+    C VV  RT +KNGY AV +G  E K + VSK
Sbjct: 3   GILGQKVGMTRVYSEEGRAIPVTVIAAGPCPVVDLRTPEKNGYSAVLLGFSERKPQRVSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+P + L EFRV  D     +G   + S F  G+ VDVTG + GKG +G 
Sbjct: 63  PLAGTFKRAGVTPCRWLREFRVA-DSGKWEIGGTVNVSLFQAGEAVDVTGTSKGKGTAGV 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR+ FGG  A+HGVS +HR   S+G    P RVFK K+M GRMG  RVTVKNL VV++D
Sbjct: 122 IKRYGFGGAPASHGVSKTHRKPNSSGASSYPSRVFKGKRMPGRMGNERVTVKNLTVVAID 181

Query: 184 DKRGLILVKGCVPGAKKNSWILV 206
            +  L+LVKG VPGA KN  +LV
Sbjct: 182 VENNLLLVKGAVPGA-KNGLVLV 203


>gi|237653996|ref|YP_002890310.1| 50S ribosomal protein L3 [Thauera sp. MZ1T]
 gi|237625243|gb|ACR01933.1| ribosomal protein L3 [Thauera sp. MZ1T]
          Length = 212

 Score =  186 bits (472), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 100/213 (46%), Positives = 138/213 (64%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G+ IPVTVL + + +V   +T+D +GY AVQ+  G+ +   
Sbjct: 1   MSLGLVGRKVGMTRIFAEDGKTIPVTVLDVSDNRVSQIKTIDTDGYAAVQIAYGKRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++KP+ G  +   V P + + EFRV+ +    +  G       F VGQ VDVTG+TIGKG
Sbjct: 61  ITKPVAGHLAKAGVEPCRGIKEFRVEAEQAGSMNAGDAVGADLFQVGQKVDVTGVTIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNF   RA+HG SISH S GS G  QDPGRVF  K+MAG+ G  + T + LE+
Sbjct: 121 FSGPIKRHNFSSNRASHGNSISHNSPGSIGMAQDPGRVFPGKRMAGQYGNVQRTTQGLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LVKG VPGAK    ++VR + K+
Sbjct: 181 VRVDVERQLLLVKGAVPGAKGGD-VVVRPAVKA 212


>gi|167582623|ref|ZP_02375497.1| 50S ribosomal protein L3 [Burkholderia thailandensis TXDOH]
 gi|167620737|ref|ZP_02389368.1| 50S ribosomal protein L3 [Burkholderia thailandensis Bt4]
          Length = 219

 Score =  186 bits (471), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 97/200 (48%), Positives = 128/200 (64%), Gaps = 1/200 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR++ D    L  G+V  P  F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVQAGEILKEFRIEADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NFG  RA+HG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAK 199
             +D  R L+LVKG VPGAK
Sbjct: 181 ARIDADRKLLLVKGAVPGAK 200


>gi|327332709|gb|EGE74443.1| 50S ribosomal protein L3 [Propionibacterium acnes HL097PA1]
          Length = 223

 Score =  186 bits (471), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 102/210 (48%), Positives = 131/210 (62%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+  KLGMT +++   R +PVTV+    C V   RT + +GY AVQ+G G  K KNV+K
Sbjct: 9   GVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTSETDGYSAVQLGYGAVKAKNVTK 68

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ L E R   D     +G   +   F+    VDVTG + GKG +G 
Sbjct: 69  PEAGHFEKAGVTPRRHLVELRTA-DASEYTLGQEIAADVFSESDFVDVTGTSKGKGTAGV 127

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH FGGLRATHGV   HRS GS G    PG+V K  +MAGRMG  RVTV+NL+V SVD
Sbjct: 128 MKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQNLQVHSVD 187

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +RG++LV+G VPG  K S ++VR + K A
Sbjct: 188 AERGIMLVRGAVPGP-KGSLLVVRSAAKKA 216


>gi|313836021|gb|EFS73735.1| 50S ribosomal protein L3 [Propionibacterium acnes HL037PA2]
 gi|314929560|gb|EFS93391.1| 50S ribosomal protein L3 [Propionibacterium acnes HL044PA1]
 gi|314970555|gb|EFT14653.1| 50S ribosomal protein L3 [Propionibacterium acnes HL037PA3]
 gi|328906230|gb|EGG26005.1| 50S ribosomal protein L3 [Propionibacterium sp. P08]
          Length = 223

 Score =  186 bits (471), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 101/211 (47%), Positives = 132/211 (62%), Gaps = 2/211 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+  KLGMT +++   + +PVTV+    C V   RT + +GY AVQ+G G  K KNV+K
Sbjct: 9   GVLGTKLGMTQLWDEHNKLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKNVTK 68

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ L E R   D     +G   +   F+    VDVTG + GKG +G 
Sbjct: 69  PEAGHFEKAGVTPRRHLVELRTA-DASEYTLGQEITAGVFSESDFVDVTGTSKGKGTAGV 127

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH FGGLRATHGV   HRS GS G    PG+V K  +MAGRMG +RVTV+NL+V SVD
Sbjct: 128 MKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGTDRVTVQNLQVHSVD 187

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            +RG++LV+G VPG  K S ++VR + K A 
Sbjct: 188 AERGIMLVRGAVPGP-KGSLLVVRSAAKKAA 217


>gi|50843318|ref|YP_056545.1| 50S ribosomal protein L3 [Propionibacterium acnes KPA171202]
 gi|289427657|ref|ZP_06429369.1| 50S ribosomal protein L3 [Propionibacterium acnes J165]
 gi|295131387|ref|YP_003582050.1| 50S ribosomal protein L3 [Propionibacterium acnes SK137]
 gi|81826389|sp|Q6A6M6|RL3_PROAC RecName: Full=50S ribosomal protein L3
 gi|50840920|gb|AAT83587.1| 50S ribosomal protein L3 [Propionibacterium acnes KPA171202]
 gi|289159148|gb|EFD07340.1| 50S ribosomal protein L3 [Propionibacterium acnes J165]
 gi|291377388|gb|ADE01243.1| 50S ribosomal protein L3 [Propionibacterium acnes SK137]
 gi|313773097|gb|EFS39063.1| 50S ribosomal protein L3 [Propionibacterium acnes HL074PA1]
 gi|313808839|gb|EFS47293.1| 50S ribosomal protein L3 [Propionibacterium acnes HL087PA2]
 gi|313810367|gb|EFS48081.1| 50S ribosomal protein L3 [Propionibacterium acnes HL083PA1]
 gi|313812297|gb|EFS50011.1| 50S ribosomal protein L3 [Propionibacterium acnes HL025PA1]
 gi|313818019|gb|EFS55733.1| 50S ribosomal protein L3 [Propionibacterium acnes HL046PA2]
 gi|313819932|gb|EFS57646.1| 50S ribosomal protein L3 [Propionibacterium acnes HL036PA1]
 gi|313823422|gb|EFS61136.1| 50S ribosomal protein L3 [Propionibacterium acnes HL036PA2]
 gi|313824894|gb|EFS62608.1| 50S ribosomal protein L3 [Propionibacterium acnes HL063PA1]
 gi|313830136|gb|EFS67850.1| 50S ribosomal protein L3 [Propionibacterium acnes HL007PA1]
 gi|313832593|gb|EFS70307.1| 50S ribosomal protein L3 [Propionibacterium acnes HL056PA1]
 gi|314925788|gb|EFS89619.1| 50S ribosomal protein L3 [Propionibacterium acnes HL036PA3]
 gi|314960868|gb|EFT04969.1| 50S ribosomal protein L3 [Propionibacterium acnes HL002PA2]
 gi|314973015|gb|EFT17111.1| 50S ribosomal protein L3 [Propionibacterium acnes HL053PA1]
 gi|314975511|gb|EFT19606.1| 50S ribosomal protein L3 [Propionibacterium acnes HL045PA1]
 gi|314979747|gb|EFT23841.1| 50S ribosomal protein L3 [Propionibacterium acnes HL072PA2]
 gi|314986053|gb|EFT30145.1| 50S ribosomal protein L3 [Propionibacterium acnes HL005PA2]
 gi|314988669|gb|EFT32760.1| 50S ribosomal protein L3 [Propionibacterium acnes HL005PA3]
 gi|315079850|gb|EFT51826.1| 50S ribosomal protein L3 [Propionibacterium acnes HL078PA1]
 gi|315083218|gb|EFT55194.1| 50S ribosomal protein L3 [Propionibacterium acnes HL027PA2]
 gi|315086828|gb|EFT58804.1| 50S ribosomal protein L3 [Propionibacterium acnes HL002PA3]
 gi|315089921|gb|EFT61897.1| 50S ribosomal protein L3 [Propionibacterium acnes HL072PA1]
 gi|315096757|gb|EFT68733.1| 50S ribosomal protein L3 [Propionibacterium acnes HL038PA1]
 gi|315106073|gb|EFT78049.1| 50S ribosomal protein L3 [Propionibacterium acnes HL030PA1]
 gi|327325171|gb|EGE66977.1| 50S ribosomal protein L3 [Propionibacterium acnes HL096PA3]
 gi|327325199|gb|EGE67004.1| 50S ribosomal protein L3 [Propionibacterium acnes HL096PA2]
 gi|327444000|gb|EGE90654.1| 50S ribosomal protein L3 [Propionibacterium acnes HL043PA1]
 gi|327449372|gb|EGE96026.1| 50S ribosomal protein L3 [Propionibacterium acnes HL013PA2]
 gi|327449400|gb|EGE96054.1| 50S ribosomal protein L3 [Propionibacterium acnes HL043PA2]
 gi|328756283|gb|EGF69899.1| 50S ribosomal protein L3 [Propionibacterium acnes HL020PA1]
 gi|328761383|gb|EGF74910.1| 50S ribosomal protein L3 [Propionibacterium acnes HL099PA1]
          Length = 223

 Score =  186 bits (471), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 102/210 (48%), Positives = 131/210 (62%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+  KLGMT +++   R +PVTV+    C V   RT + +GY AVQ+G G  K KNV+K
Sbjct: 9   GVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKNVTK 68

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ L E R   D     +G   +   F+    VDVTG + GKG +G 
Sbjct: 69  PEAGHFEKAGVTPRRHLVELRTA-DASEYTLGQEIAADVFSESDFVDVTGTSKGKGTAGV 127

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH FGGLRATHGV   HRS GS G    PG+V K  +MAGRMG  RVTV+NL+V SVD
Sbjct: 128 MKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQNLQVHSVD 187

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +RG++LV+G VPG  K S ++VR + K A
Sbjct: 188 AERGIMLVRGAVPGP-KGSLLVVRSAAKKA 216


>gi|148545739|ref|YP_001265841.1| 50S ribosomal protein L3 [Pseudomonas putida F1]
 gi|161378147|ref|NP_742620.2| 50S ribosomal protein L3 [Pseudomonas putida KT2440]
 gi|167031500|ref|YP_001666731.1| 50S ribosomal protein L3 [Pseudomonas putida GB-1]
 gi|325272044|ref|ZP_08138485.1| 50S ribosomal protein L3 [Pseudomonas sp. TJI-51]
 gi|42559622|sp|Q88QN5|RL3_PSEPK RecName: Full=50S ribosomal protein L3
 gi|166233182|sp|A5VXP7|RL3_PSEP1 RecName: Full=50S ribosomal protein L3
 gi|189042858|sp|B0KK67|RL3_PSEPG RecName: Full=50S ribosomal protein L3
 gi|148509797|gb|ABQ76657.1| LSU ribosomal protein L3P [Pseudomonas putida F1]
 gi|166857988|gb|ABY96395.1| ribosomal protein L3 [Pseudomonas putida GB-1]
 gi|313496819|gb|ADR58185.1| RplC [Pseudomonas putida BIRD-1]
 gi|324102821|gb|EGC00227.1| 50S ribosomal protein L3 [Pseudomonas sp. TJI-51]
          Length = 211

 Score =  186 bits (471), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 100/212 (47%), Positives = 135/212 (63%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GV+ RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVIGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + ++EFR+++ D     G +     FT GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRGVWEFRLEEGD--FQAGDLIKAELFTAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA     ++VR + K+
Sbjct: 179 RVDAERNLLLIKGAVPGATGGD-VVVRPAVKA 209


>gi|24981833|gb|AAN66084.1|AE016238_2 ribosomal protein L3 [Pseudomonas putida KT2440]
          Length = 222

 Score =  186 bits (471), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 100/212 (47%), Positives = 135/212 (63%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GV+ RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 12  MTIGVIGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 71

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + ++EFR+++ D     G +     FT GQLVDVTG + GKGF
Sbjct: 72  VTAAQAGHFAKANVAAGRGVWEFRLEEGD--FQAGDLIKAELFTAGQLVDVTGQSKGKGF 129

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 130 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 189

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA     ++VR + K+
Sbjct: 190 RVDAERNLLLIKGAVPGATGGD-VVVRPAVKA 220


>gi|114319619|ref|YP_741302.1| 50S ribosomal protein L3P [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312456|sp|Q0ABH5|RL3_ALHEH RecName: Full=50S ribosomal protein L3
 gi|114226013|gb|ABI55812.1| LSU ribosomal protein L3P [Alkalilimnicola ehrlichii MLHE-1]
          Length = 218

 Score =  186 bits (471), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 99/199 (49%), Positives = 128/199 (64%), Gaps = 1/199 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT V+  +G  +PVTV+     +V   RT +++GY  VQV AG  +   
Sbjct: 1   MSIGIVGRKAGMTRVFTEDGASVPVTVIEASPNRVTQVRTPERDGYSGVQVTAGSRRPNR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           VSKPM G F++  V   + ++EFRV     + L  G   +   F  GQ+VD+TG + GKG
Sbjct: 61  VSKPMAGHFAAAGVDAGRGVWEFRVSDGQAIELEAGKELTVETFEAGQVVDITGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRHNF    ATHG S++HR+ GS G  Q PGRVFK KKMAG+MG  R TVKNLEV
Sbjct: 121 FAGTVKRHNFRTQDATHGNSLAHRAPGSIGQNQTPGRVFKGKKMAGQMGNKRSTVKNLEV 180

Query: 180 VSVDDKRGLILVKGCVPGA 198
           V VD +R L+LV+G VPGA
Sbjct: 181 VRVDAERHLLLVRGSVPGA 199


>gi|148652238|ref|YP_001279331.1| 50S ribosomal protein L3 [Psychrobacter sp. PRwf-1]
 gi|172048471|sp|A5WCJ0|RL3_PSYWF RecName: Full=50S ribosomal protein L3
 gi|148571322|gb|ABQ93381.1| LSU ribosomal protein L3P [Psychrobacter sp. PRwf-1]
          Length = 212

 Score =  186 bits (471), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 98/213 (46%), Positives = 136/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V +K GMT V+   G  IPVTV+ +D  ++   +T D +GY A+Q+  GE +   
Sbjct: 1   MAIGLVGKKCGMTRVFTETGASIPVTVVEVDANRITQIKTNDTDGYQAIQITTGERRDSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V   + ++EFRV +++ +    GS  +   F  GQLVDVTG + GKG
Sbjct: 61  VTAAQKGHFAKAGVKAGRGVWEFRVTEEELEGREAGSEIAADLFEAGQLVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KRHNF    ATHG S+SHR  GSTG  Q PG+VFK KKM G+MG  RVTV+ LEV
Sbjct: 121 FQGGVKRHNFSMQDATHGNSVSHRVLGSTGQNQSPGKVFKGKKMPGQMGNKRVTVQGLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VSVD ++GL+++KG +PGA     ++VR S K+
Sbjct: 181 VSVDAEKGLLVIKGAIPGANGGD-VIVRPSIKA 212


>gi|167518906|ref|XP_001743793.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777755|gb|EDQ91371.1| predicted protein [Monosiga brevicollis MX1]
          Length = 309

 Score =  185 bits (470), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 98/214 (45%), Positives = 143/214 (66%), Gaps = 2/214 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+ ++A+KLGMT  ++  G  IP+TVL +++CQVV HRT++++GY A+ +GA   K   +
Sbjct: 66  RAPLIAKKLGMTQTWDRWGTLIPMTVLQVEDCQVVGHRTIERDGYEALILGAETIKDSKL 125

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
              +RG F+   +  K+ + E R+  +  +LP+G   S  +F  GQLVDV G TIGKGF+
Sbjct: 126 DGRIRGQFAKHGLPSKRHMEEARISAEA-MLPIGYELSCEHFEPGQLVDVRGTTIGKGFA 184

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF G+ ATHGV+ +HR  G  G  QDPGRV+K K+ AGRMGG     +NL V+ 
Sbjct: 185 GVMKRHNFKGMPATHGVTKTHRRMGGFGGGQDPGRVWKGKRNAGRMGGVLRWQRNLAVIR 244

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           +D +  LI+V G +PGA +NS +LVRD+  + ++
Sbjct: 245 IDTRYNLIMVAGSIPGA-ENSRVLVRDAIMNPLH 277


>gi|325267188|ref|ZP_08133855.1| 50S ribosomal protein L3 [Kingella denitrificans ATCC 33394]
 gi|324981351|gb|EGC16996.1| 50S ribosomal protein L3 [Kingella denitrificans ATCC 33394]
          Length = 215

 Score =  185 bits (470), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 104/214 (48%), Positives = 135/214 (63%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V+  +G  IPVTVL +   +V   ++ + +GY AVQV  GE K  +
Sbjct: 1   MTLGLVGRKVGMTRVFTEQGESIPVTVLEMSANRVTQVKSKETDGYTAVQVTFGEKKTSH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF V ++    L  G   +   F+ GQLVDVTG + GKG
Sbjct: 61  VNKAQAGHFAKAGVEAGRGLHEFVVSEEKAAELKAGDSVTVELFSAGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV++LE+
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKSTVQHLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V VD +R L+LVKG VPGA  NS ++VR S K A
Sbjct: 181 VRVDVERNLLLVKGAVPGA-VNSDVVVRHSVKKA 213


>gi|83720557|ref|YP_443572.1| 50S ribosomal protein L3 [Burkholderia thailandensis E264]
 gi|257137645|ref|ZP_05585907.1| 50S ribosomal protein L3 [Burkholderia thailandensis E264]
 gi|109893417|sp|Q2SU27|RL3_BURTA RecName: Full=50S ribosomal protein L3
 gi|83654382|gb|ABC38445.1| ribosomal protein L3 [Burkholderia thailandensis E264]
          Length = 219

 Score =  185 bits (470), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 97/200 (48%), Positives = 128/200 (64%), Gaps = 1/200 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR++ D    L  G+V  P  F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVQTGEILKEFRIEADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NFG  RA+HG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAK 199
             +D  R L+LVKG VPGAK
Sbjct: 181 ARIDADRKLLLVKGAVPGAK 200


>gi|294789223|ref|ZP_06754462.1| 50S ribosomal protein L3 [Simonsiella muelleri ATCC 29453]
 gi|294482964|gb|EFG30652.1| 50S ribosomal protein L3 [Simonsiella muelleri ATCC 29453]
          Length = 215

 Score =  185 bits (470), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 103/214 (48%), Positives = 135/214 (63%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTVL +   +V   ++ + +GY AVQV  GE K   
Sbjct: 1   MTLGLVGRKVGMTRIFTEQGESIPVTVLEMSTNRVTQVKSKETDGYTAVQVTFGEKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP  G F+   V   + L EF V ++    L  G+V +   F  GQLVDVTG + GKG
Sbjct: 61  VTKPEAGHFAKAGVEAGRGLHEFVVSEEKAAELKAGNVLTVELFQAGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV++LE+
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKSTVQHLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V VD +R L+LVKG VPG+  NS ++V  S K A
Sbjct: 181 VRVDVERNLLLVKGAVPGS-VNSDVVVCHSVKKA 213


>gi|330505207|ref|YP_004382076.1| 50S ribosomal protein L3 [Pseudomonas mendocina NK-01]
 gi|328919493|gb|AEB60324.1| 50S ribosomal protein L3 [Pseudomonas mendocina NK-01]
          Length = 209

 Score =  185 bits (470), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 102/212 (48%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +  + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKNEESDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK   G F+  NV+  + + EFR+++ D     G + +   F  GQLVDVTG + GKGF
Sbjct: 61  VSKAQAGHFAKANVAAGRTVLEFRLEEGD--YQAGDLINAEIFQAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA     ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGD-VIVRPAVKA 209


>gi|269128516|ref|YP_003301886.1| 50S ribosomal protein L3 [Thermomonospora curvata DSM 43183]
 gi|268313474|gb|ACY99848.1| ribosomal protein L3 [Thermomonospora curvata DSM 43183]
          Length = 216

 Score =  185 bits (469), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 131/212 (61%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R GV+  KLGMT V++ EGR +PVTV+    C V   RT +K+GY AVQ+G G+   + V
Sbjct: 5   RKGVLGEKLGMTQVFDDEGRIVPVTVVQAGPCVVTQIRTPEKDGYSAVQIGYGQVNPRKV 64

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F+   V+P++ L E R   D     +G   +   F  G+ VDVTG T GKG +
Sbjct: 65  NKPRMGHFAKAGVTPRRYLTEVRTD-DASEYTLGQEITVEIFKAGEKVDVTGTTKGKGTA 123

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH FGGL A+HG    HRS GS G    PGRVFK  +MAGRMG  R TV+NL + +
Sbjct: 124 GVMKRHGFGGLGASHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNVRKTVQNLTIHA 183

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           VD  +GL+L+KG +PG      +LVRD+ K A
Sbjct: 184 VDPDKGLLLIKGAIPGP-NGGLVLVRDAVKGA 214


>gi|146308923|ref|YP_001189388.1| 50S ribosomal protein L3 [Pseudomonas mendocina ymp]
 gi|166233181|sp|A4XZ90|RL3_PSEMY RecName: Full=50S ribosomal protein L3
 gi|145577124|gb|ABP86656.1| LSU ribosomal protein L3P [Pseudomonas mendocina ymp]
          Length = 209

 Score =  185 bits (469), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 102/212 (48%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +  + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKNEESDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK   G F+  NV+  + + EFR+++ D     G + +   F  GQLVDVTG + GKGF
Sbjct: 61  VSKAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDLINAEIFQAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA     ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGD-VIVRPAVKA 209


>gi|313667441|ref|YP_004047725.1| 50S ribosomal protein L3 [Neisseria lactamica ST-640]
 gi|313004903|emb|CBN86329.1| 50S ribosomal protein L3 [Neisseria lactamica 020-06]
          Length = 214

 Score =  185 bits (469), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 104/212 (49%), Positives = 135/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++  + L  G   + S F VGQLVDVTG + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLIEFALTEEKPVELKAGDEITVSMFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPGA  NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGA-VNSDVVVRPSVK 211


>gi|330814199|ref|YP_004358438.1| LSU ribosomal protein L3p (L3e) [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327487294|gb|AEA81699.1| LSU ribosomal protein L3p (L3e) [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 272

 Score =  185 bits (469), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 97/211 (45%), Positives = 137/211 (64%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR G+V +K+GMT  +   G  +PVTVL ++  ++V     DK GY A+ VG G  K   
Sbjct: 1   MRLGLVGKKIGMTQKFYESGEAVPVTVLQVEPGKIVEVIEKDKRGYSALLVGYGHIKSSK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++K M+GF++  ++  KK L E+RV+  ++    GS  +       + VD+   TIGKGF
Sbjct: 61  LTKSMKGFYAKKSLEAKKFLKEYRVENTEEF-KAGSDVTLDILKDKKYVDIRSKTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVS+SHRSHGSTG RQDPG+VFK KKMAG MG    T++ LE+V
Sbjct: 120 AGVMKRWNFGGLRATHGVSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDKFRTMQGLEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D    L+ ++G VPG+ KN+++ + ++ K
Sbjct: 180 EADLVNNLLYLRGSVPGS-KNAYVEITEAVK 209


>gi|317123097|ref|YP_004103100.1| 50S ribosomal protein L3P [Thermaerobacter marianensis DSM 12885]
 gi|315593077|gb|ADU52373.1| LSU ribosomal protein L3P [Thermaerobacter marianensis DSM 12885]
          Length = 217

 Score =  185 bits (469), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 102/210 (48%), Positives = 133/210 (63%), Gaps = 3/210 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RKLGMT +++ EGR +PVTV+    C VV  RT +++GY AVQ+G GE K   
Sbjct: 1   MGVGLLGRKLGMTQIFDDEGRAVPVTVIQAGPCVVVQTRTEERDGYRAVQLGFGEVKPSK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP-VGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KPM G F    V+P K L EFR++ DD+ LP VG   +   F  G+ VDVTG + GKG
Sbjct: 61  VNKPMAGHFRKAGVAPVKVLREFRLEGDDEPLPEVGQQLTVELFKAGEYVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G + RH FG    +HG S  HR  GS G    P RVFK ++MAGR G  RVTV+ L+V
Sbjct: 121 FLGPIARHGFGRGPMSHG-SKYHRGPGSLGPSTYPARVFKGRRMAGRTGAERVTVRGLQV 179

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           V VD +R L+LVKG VPG  + S + +R +
Sbjct: 180 VRVDPERNLLLVKGAVPGP-RGSVVAIRKT 208


>gi|119478132|ref|ZP_01618211.1| 50S ribosomal protein L3 [marine gamma proteobacterium HTCC2143]
 gi|119448838|gb|EAW30081.1| 50S ribosomal protein L3 [marine gamma proteobacterium HTCC2143]
          Length = 214

 Score =  185 bits (469), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 103/211 (48%), Positives = 134/211 (63%), Gaps = 1/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT V+  +G  IPVTV+ +   +V   +T + +GY A QV AG  K   
Sbjct: 1   MTIGLVGRKSGMTRVFTDDGISIPVTVIEVSPNRVTSVKTGESDGYSAFQVTAGARKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK   G F+  +V   + L+EFR++  D+   VG+  + S F VGQ VDVTG + GKGF
Sbjct: 61  VSKAEAGQFAKASVEAGRGLWEFRLEDGDEAPVVGAELTVSTFEVGQKVDVTGQSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF    ATHG SISHRS+GS G  Q PGRVFK KKM+G MG  RVT++ LEVV
Sbjct: 121 QGGIKRWNFQMQDATHGNSISHRSNGSIGQCQTPGRVFKGKKMSGHMGAERVTIQTLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD+ R L+L+KG +PGA     ++VR + K
Sbjct: 181 RVDEARNLLLIKGAIPGAPGGD-VIVRPATK 210


>gi|261400052|ref|ZP_05986177.1| 50S ribosomal protein L3 [Neisseria lactamica ATCC 23970]
 gi|269210278|gb|EEZ76733.1| 50S ribosomal protein L3 [Neisseria lactamica ATCC 23970]
          Length = 214

 Score =  184 bits (468), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 105/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++    L  G   + S F VGQLVDVTG + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPGA  NS I+VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGA-VNSNIVVRPSVK 211


>gi|90409445|ref|ZP_01217509.1| ribosomal protein L3 [Psychromonas sp. CNPT3]
 gi|90309447|gb|EAS37668.1| ribosomal protein L3 [Psychromonas sp. CNPT3]
          Length = 212

 Score =  184 bits (468), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 103/213 (48%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTVL     +V   +TLD +GY A+QV  G  K   
Sbjct: 1   MTIGLVGRKIGMTRIFTEDGVSIPVTVLECTPNRVTQVKTLDTDGYQAIQVTTGAKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP  G F+   V   + L+EFR+++++   + VG+  S   F     VDVTG + GKG
Sbjct: 61  VTKPEAGHFAKAGVEAGRGLWEFRLEENEGTDIKVGAELSVELFNDITKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHRS+GS G  Q PGRVFK KKM+G MG  RVT +NLEV
Sbjct: 121 FQGGIKRWNFSMQDATHGNSLSHRSNGSIGMCQTPGRVFKGKKMSGHMGAERVTTQNLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD KR L+LVKG VPGA KN  + ++ + K+
Sbjct: 181 VRVDVKRNLLLVKGAVPGA-KNGNVFIKPAVKA 212


>gi|167838212|ref|ZP_02465071.1| 50S ribosomal protein L3 [Burkholderia thailandensis MSMB43]
          Length = 219

 Score =  184 bits (468), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 97/200 (48%), Positives = 127/200 (63%), Gaps = 1/200 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR+  D    L  G+V  P  F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVQAGEILKEFRIAADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NFG  RA+HG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAK 199
             +D  R L+LVKG VPGAK
Sbjct: 181 ARIDADRKLLLVKGAVPGAK 200


>gi|255020765|ref|ZP_05292823.1| LSU ribosomal protein L3p (L3e) [Acidithiobacillus caldus ATCC
           51756]
 gi|254969761|gb|EET27265.1| LSU ribosomal protein L3p (L3e) [Acidithiobacillus caldus ATCC
           51756]
          Length = 210

 Score =  184 bits (468), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 96/212 (45%), Positives = 138/212 (65%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT + + +GR +PVTV+ +D   +   +T +++GY AVQV  GE + + 
Sbjct: 1   MAIGLVGRKIGMTRIRSEDGRVVPVTVIQVDTNTITQIKTQERDGYTAVQVSTGERRPQR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+  + G +      P + L EFR    +D   +G       F  GQ VDVTG++ GKGF
Sbjct: 61  VTSALAGHYRRAGAQPGRVLREFRDPGLEDP-QLGQEIGLDIFNTGQRVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GA+KRHNF   RA+HG S+SHR+ GS GCRQ PGRVFK KKMAG++G  +VT  NLE+V
Sbjct: 120 AGAIKRHNFRSNRASHGNSLSHRAPGSIGCRQTPGRVFKGKKMAGQLGNEQVTTLNLELV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +D +R L++VKG VPGA +   ++VR + ++
Sbjct: 180 RIDAERRLLMVKGAVPGANQGD-VIVRPAVRA 210


>gi|296313365|ref|ZP_06863306.1| 50S ribosomal protein L3 [Neisseria polysaccharea ATCC 43768]
 gi|296840076|gb|EFH24014.1| 50S ribosomal protein L3 [Neisseria polysaccharea ATCC 43768]
          Length = 214

 Score =  184 bits (468), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 104/212 (49%), Positives = 135/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY+AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYIAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++    L  G   + S F VGQLVDVTG + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPGA  NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGA-VNSDVVVRPSVK 211


>gi|161870915|ref|YP_001600095.1| 50S ribosomal protein L3 [Neisseria meningitidis 053442]
 gi|189042853|sp|A9M3W6|RL3_NEIM0 RecName: Full=50S ribosomal protein L3
 gi|161596468|gb|ABX74128.1| 50S ribosomal protein L3 [Neisseria meningitidis 053442]
          Length = 214

 Score =  184 bits (468), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 104/212 (49%), Positives = 135/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++    L  G   + S F VGQLVDVTG++ GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGISKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPGA  NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGA-VNSDVVVRPSVK 211


>gi|315605899|ref|ZP_07880930.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315312181|gb|EFU60267.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 221

 Score =  184 bits (468), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 93/209 (44%), Positives = 133/209 (63%), Gaps = 2/209 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RK+GMT V++ +G  +P+TV+ +    V   RT++ +GY A+Q+G GE   + V+KP
Sbjct: 15  LLGRKIGMTQVWDADGHLVPLTVVQVGTNVVTQVRTVEVDGYSAIQLGFGEIDSRKVTKP 74

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + G F    V+P++ L E R  + D    +G     + F  GQ VDV+G T GKGF+G M
Sbjct: 75  LLGHFEKAGVAPRRHLAEVRTSEHDSY-ELGQELDATAFEAGQSVDVSGTTKGKGFAGVM 133

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH F G+ A+HG   +HR  GS G    PGR+FK  +MAGRMGGNR TV+NL + +VD 
Sbjct: 134 KRHGFAGVSASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGGNRRTVQNLTIQAVDA 193

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           ++GL+L+ G +PG  KN  +LVR S K A
Sbjct: 194 EKGLLLISGAIPG-PKNGVVLVRSSVKGA 221


>gi|170723906|ref|YP_001751594.1| 50S ribosomal protein L3 [Pseudomonas putida W619]
 gi|226730552|sp|B1JDW4|RL3_PSEPW RecName: Full=50S ribosomal protein L3
 gi|169761909|gb|ACA75225.1| ribosomal protein L3 [Pseudomonas putida W619]
          Length = 211

 Score =  184 bits (467), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + ++EFR+++ +     G       FT GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRGVWEFRLEEGE--FQAGDSIKAELFTAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA     ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGD-VVVRPAVKA 209


>gi|239997926|ref|ZP_04717850.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae 35/02]
 gi|240017545|ref|ZP_04724085.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae FA6140]
 gi|240113966|ref|ZP_04728456.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae MS11]
 gi|240116700|ref|ZP_04730762.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID18]
 gi|240118922|ref|ZP_04732984.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID1]
 gi|240124671|ref|ZP_04737557.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-92-679]
 gi|254494721|ref|ZP_05107892.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae 1291]
 gi|268593776|ref|ZP_06127943.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae 35/02]
 gi|268600030|ref|ZP_06134197.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae MS11]
 gi|268602368|ref|ZP_06136535.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID18]
 gi|268604631|ref|ZP_06138798.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID1]
 gi|268683245|ref|ZP_06150107.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-92-679]
 gi|226513761|gb|EEH63106.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae 1291]
 gi|268547165|gb|EEZ42583.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae 35/02]
 gi|268584161|gb|EEZ48837.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae MS11]
 gi|268586499|gb|EEZ51175.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID18]
 gi|268588762|gb|EEZ53438.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID1]
 gi|268623529|gb|EEZ55929.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-92-679]
          Length = 214

 Score =  184 bits (467), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++    L  G   + S F VGQLVDVTG + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGVAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPGA  NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGA-VNSDVVVRPSVK 211


>gi|293190259|ref|ZP_06608755.1| 50S ribosomal protein L3 [Actinomyces odontolyticus F0309]
 gi|292821075|gb|EFF80028.1| 50S ribosomal protein L3 [Actinomyces odontolyticus F0309]
          Length = 221

 Score =  184 bits (467), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 93/209 (44%), Positives = 133/209 (63%), Gaps = 2/209 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RKLGMT V++ +G  +P+TV+ +    V   RT + +GY A+Q+G GE   + V+KP
Sbjct: 15  LLGRKLGMTQVWDADGHLVPLTVVQVGTNVVTQVRTDEVDGYSAIQLGFGEIDSRKVTKP 74

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           ++G F    V+P++ L E R  + D    +G     + F  G+ VDV+G T GKGF+G M
Sbjct: 75  LQGHFEKAGVAPRRHLVEVRTSEQDSF-ELGQELDATTFEAGEGVDVSGTTKGKGFAGVM 133

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH F G+ A+HG   +HR  GS G    PGR+FK  +MAGRMGGNR TV+NL + +VD 
Sbjct: 134 KRHGFAGVSASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGGNRRTVQNLTIQAVDA 193

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           ++GL+L+ G +PG  KN  +LVR S K A
Sbjct: 194 EKGLLLISGAIPGP-KNGVVLVRSSVKGA 221


>gi|313816574|gb|EFS54288.1| 50S ribosomal protein L3 [Propionibacterium acnes HL059PA1]
 gi|315097985|gb|EFT69961.1| 50S ribosomal protein L3 [Propionibacterium acnes HL059PA2]
          Length = 223

 Score =  184 bits (467), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 101/210 (48%), Positives = 130/210 (61%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+  KLGMT +++   R +PVTV+    C V   RT + +GY AVQ+G G  K KNV+K
Sbjct: 9   GVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKNVTK 68

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ L E R   D     +G   +   F+    VDVT  + GKG +G 
Sbjct: 69  PEAGHFEKAGVTPRRHLVELRTA-DASEYALGQEIAADVFSESDFVDVTATSKGKGTAGV 127

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH FGGLRATHGV   HRS GS G    PG+V K  +MAGRMG  RVTV+NL+V SVD
Sbjct: 128 MKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQNLQVHSVD 187

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +RG++LV+G VPG  K S ++VR + K A
Sbjct: 188 AERGIMLVRGAVPG-PKGSLLVVRSAAKKA 216


>gi|261364855|ref|ZP_05977738.1| 50S ribosomal protein L3 [Neisseria mucosa ATCC 25996]
 gi|261378041|ref|ZP_05982614.1| 50S ribosomal protein L3 [Neisseria cinerea ATCC 14685]
 gi|298370591|ref|ZP_06981906.1| 50S ribosomal protein L3 [Neisseria sp. oral taxon 014 str. F0314]
 gi|269145491|gb|EEZ71909.1| 50S ribosomal protein L3 [Neisseria cinerea ATCC 14685]
 gi|288566904|gb|EFC88464.1| 50S ribosomal protein L3 [Neisseria mucosa ATCC 25996]
 gi|298281201|gb|EFI22691.1| 50S ribosomal protein L3 [Neisseria sp. oral taxon 014 str. F0314]
          Length = 214

 Score =  184 bits (467), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDADGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++    L  G   + S F VGQLVDVTG + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPGA  NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGA-VNSDVVVRPSVK 211


>gi|288574662|ref|ZP_06393019.1| ribosomal protein L3 [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570403|gb|EFC91960.1| ribosomal protein L3 [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 208

 Score =  184 bits (467), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 95/206 (46%), Positives = 133/206 (64%), Gaps = 2/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT +YN  G+ +PVTV+    C V+  RT +KNGY A+ +G G+ K + 
Sbjct: 1   MSLGILGQKLGMTQIYNENGQAVPVTVVEAGPCPVLAVRTEEKNGYDAILLGFGKVKPRK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++GFF       K+ L EFR+    D   VG+    + F  G+ VD TG++ GKGF
Sbjct: 61  VTKPLKGFFDKAQSEAKRWLKEFRISNASDY-EVGNAVDVTIFEAGEKVDATGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR+NFGG  A+HGVS +HR   S+G    P  VFK K M G++G  +VTVKNL VV
Sbjct: 120 AGVIKRYNFGGAPASHGVSKTHRKPNSSGASSYPSHVFKGKTMPGQLGNEQVTVKNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
           +VD +  L+LVKG +PGA KN  +L+
Sbjct: 180 AVDVENNLVLVKGAIPGA-KNGLVLL 204


>gi|15676069|ref|NP_273200.1| 50S ribosomal protein L3 [Neisseria meningitidis MC58]
 gi|59802160|ref|YP_208872.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae FA 1090]
 gi|121634016|ref|YP_974261.1| 50S ribosomal protein L3 [Neisseria meningitidis FAM18]
 gi|218767168|ref|YP_002341680.1| 50S ribosomal protein L3 [Neisseria meningitidis Z2491]
 gi|240015096|ref|ZP_04722009.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae DGI18]
 gi|240081688|ref|ZP_04726231.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae FA19]
 gi|240122168|ref|ZP_04735130.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID24-1]
 gi|240124460|ref|ZP_04737416.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID332]
 gi|240129136|ref|ZP_04741797.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-93-1035]
 gi|254805814|ref|YP_003084035.1| 50S ribosomal protein L3 [Neisseria meningitidis alpha14]
 gi|260439541|ref|ZP_05793357.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae DGI2]
 gi|268597785|ref|ZP_06131952.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae FA19]
 gi|268683089|ref|ZP_06149951.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID332]
 gi|268687519|ref|ZP_06154381.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-93-1035]
 gi|291042777|ref|ZP_06568518.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae DGI2]
 gi|293398202|ref|ZP_06642407.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae F62]
 gi|304388943|ref|ZP_07370990.1| 50S ribosomal protein L3 [Neisseria meningitidis ATCC 13091]
 gi|42559565|sp|P60443|RL3_NEIMA RecName: Full=50S ribosomal protein L3
 gi|42559566|sp|P60444|RL3_NEIMB RecName: Full=50S ribosomal protein L3
 gi|81311149|sp|Q5F5S7|RL3_NEIG1 RecName: Full=50S ribosomal protein L3
 gi|166233169|sp|A1KRH3|RL3_NEIMF RecName: Full=50S ribosomal protein L3
 gi|7225360|gb|AAF40600.1| 50S ribosomal protein L3 [Neisseria meningitidis MC58]
 gi|59719055|gb|AAW90460.1| putative 50S ribosomal protein L3 [Neisseria gonorrhoeae FA 1090]
 gi|120865722|emb|CAM09451.1| 50S ribosomal protein L3 [Neisseria meningitidis FAM18]
 gi|121051176|emb|CAM07447.1| 50S ribosomal protein L3 [Neisseria meningitidis Z2491]
 gi|254669356|emb|CBA08445.1| 50S ribosomal protein L3 [Neisseria meningitidis alpha14]
 gi|268551573|gb|EEZ46592.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae FA19]
 gi|268623373|gb|EEZ55773.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID332]
 gi|268627803|gb|EEZ60203.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-93-1035]
 gi|291013211|gb|EFE05177.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae DGI2]
 gi|291611465|gb|EFF40535.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae F62]
 gi|304337077|gb|EFM03264.1| 50S ribosomal protein L3 [Neisseria meningitidis ATCC 13091]
 gi|308388358|gb|ADO30678.1| 50S ribosomal protein L3 [Neisseria meningitidis alpha710]
 gi|316985672|gb|EFV64618.1| ribosomal L3 family protein [Neisseria meningitidis H44/76]
 gi|319411374|emb|CBY91785.1| 50S ribosomal protein L3 [Neisseria meningitidis WUE 2594]
 gi|325129061|gb|EGC51910.1| ribosomal protein L3 [Neisseria meningitidis N1568]
 gi|325131084|gb|EGC53807.1| ribosomal protein L3 [Neisseria meningitidis OX99.30304]
 gi|325133054|gb|EGC55726.1| ribosomal protein L3 [Neisseria meningitidis M6190]
 gi|325135148|gb|EGC57774.1| ribosomal protein L3 [Neisseria meningitidis M13399]
 gi|325137200|gb|EGC59795.1| ribosomal protein L3 [Neisseria meningitidis M0579]
 gi|325139032|gb|EGC61578.1| ribosomal protein L3 [Neisseria meningitidis ES14902]
 gi|325141156|gb|EGC63656.1| ribosomal protein L3 [Neisseria meningitidis CU385]
 gi|325143232|gb|EGC65571.1| ribosomal protein L3 [Neisseria meningitidis 961-5945]
 gi|325145339|gb|EGC67616.1| ribosomal protein L3 [Neisseria meningitidis M01-240013]
 gi|325197429|gb|ADY92885.1| ribosomal protein L3 [Neisseria meningitidis G2136]
 gi|325199355|gb|ADY94810.1| ribosomal protein L3 [Neisseria meningitidis H44/76]
 gi|325203023|gb|ADY98477.1| ribosomal protein L3 [Neisseria meningitidis M01-240149]
 gi|325203262|gb|ADY98715.1| ribosomal protein L3 [Neisseria meningitidis M01-240355]
 gi|325205235|gb|ADZ00688.1| ribosomal protein L3 [Neisseria meningitidis M04-240196]
 gi|325207178|gb|ADZ02630.1| ribosomal protein L3 [Neisseria meningitidis NZ-05/33]
          Length = 214

 Score =  184 bits (466), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++    L  G   + S F VGQLVDVTG + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPGA  NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGA-VNSDVVVRPSVK 211


>gi|46109318|ref|XP_381717.1| hypothetical protein FG01541.1 [Gibberella zeae PH-1]
          Length = 332

 Score =  184 bits (466), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 97/200 (48%), Positives = 133/200 (66%), Gaps = 2/200 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSGV+A K GMT ++ +   R+P TVL LD  QVV ++T +KNGY AVQ+G G    +N
Sbjct: 75  LRSGVLAVKKGMTSMF-VGKIRVPCTVLQLDQVQVVANKTREKNGYWAVQIGQGSRDGRN 133

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+ P+ G++ +  ++PK +L EF+V+  D LLPVG    P +F  GQ VDV G + G GF
Sbjct: 134 VTSPLLGYYEAKGIAPKAELAEFKVRDKDGLLPVGVQILPDWFKKGQYVDVKGRSRGMGF 193

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179
           +G MKRH F G  A+HG S +HR+ G+TG  Q  G RV   KKM GRMG   VTV+NL+V
Sbjct: 194 AGGMKRHGFSGQEASHGNSKNHRTIGTTGPSQGSGSRVMPGKKMPGRMGNEFVTVQNLKV 253

Query: 180 VSVDDKRGLILVKGCVPGAK 199
           + VD++ G++LV G + G K
Sbjct: 254 MMVDNELGIVLVGGPIAGPK 273


>gi|261380559|ref|ZP_05985132.1| 50S ribosomal protein L3 [Neisseria subflava NJ9703]
 gi|284796527|gb|EFC51874.1| 50S ribosomal protein L3 [Neisseria subflava NJ9703]
          Length = 214

 Score =  184 bits (466), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 104/212 (49%), Positives = 136/212 (64%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+  +V   + L EF + ++    L VG   + S F VGQLVDVTG + GKG
Sbjct: 61  VNKTEAGHFAKASVEAGRGLVEFALTEEKLAELKVGDEITVSMFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPG+  NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGS-VNSDVVVRPSVK 211


>gi|289424800|ref|ZP_06426582.1| 50S ribosomal protein L3 [Propionibacterium acnes SK187]
 gi|289154763|gb|EFD03446.1| 50S ribosomal protein L3 [Propionibacterium acnes SK187]
 gi|313763238|gb|EFS34602.1| 50S ribosomal protein L3 [Propionibacterium acnes HL013PA1]
 gi|313793258|gb|EFS41316.1| 50S ribosomal protein L3 [Propionibacterium acnes HL110PA1]
 gi|313801098|gb|EFS42366.1| 50S ribosomal protein L3 [Propionibacterium acnes HL110PA2]
 gi|313828364|gb|EFS66078.1| 50S ribosomal protein L3 [Propionibacterium acnes HL063PA2]
 gi|313837949|gb|EFS75663.1| 50S ribosomal protein L3 [Propionibacterium acnes HL086PA1]
 gi|314914332|gb|EFS78163.1| 50S ribosomal protein L3 [Propionibacterium acnes HL005PA4]
 gi|314917652|gb|EFS81483.1| 50S ribosomal protein L3 [Propionibacterium acnes HL050PA1]
 gi|314919616|gb|EFS83447.1| 50S ribosomal protein L3 [Propionibacterium acnes HL050PA3]
 gi|314930207|gb|EFS94038.1| 50S ribosomal protein L3 [Propionibacterium acnes HL067PA1]
 gi|314957186|gb|EFT01290.1| 50S ribosomal protein L3 [Propionibacterium acnes HL027PA1]
 gi|314957762|gb|EFT01865.1| 50S ribosomal protein L3 [Propionibacterium acnes HL002PA1]
 gi|314963542|gb|EFT07642.1| 50S ribosomal protein L3 [Propionibacterium acnes HL082PA1]
 gi|314969875|gb|EFT13973.1| 50S ribosomal protein L3 [Propionibacterium acnes HL037PA1]
 gi|315077165|gb|EFT49232.1| 50S ribosomal protein L3 [Propionibacterium acnes HL053PA2]
 gi|315100628|gb|EFT72604.1| 50S ribosomal protein L3 [Propionibacterium acnes HL046PA1]
 gi|315109232|gb|EFT81208.1| 50S ribosomal protein L3 [Propionibacterium acnes HL030PA2]
 gi|327451421|gb|EGE98075.1| 50S ribosomal protein L3 [Propionibacterium acnes HL087PA3]
 gi|327451604|gb|EGE98258.1| 50S ribosomal protein L3 [Propionibacterium acnes HL092PA1]
 gi|327451891|gb|EGE98545.1| 50S ribosomal protein L3 [Propionibacterium acnes HL083PA2]
 gi|328752105|gb|EGF65721.1| 50S ribosomal protein L3 [Propionibacterium acnes HL087PA1]
 gi|328755499|gb|EGF69115.1| 50S ribosomal protein L3 [Propionibacterium acnes HL025PA2]
          Length = 223

 Score =  184 bits (466), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 101/210 (48%), Positives = 130/210 (61%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+  KLGMT +++   R +PVTV+    C V   RT + +GY AVQ+G G  K KNV+K
Sbjct: 9   GVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKNVTK 68

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ L E R   D     +G   +   F+    VDVT  + GKG +G 
Sbjct: 69  PEAGHFEKAGVTPRRHLVELRTA-DASEYTLGQEIAADVFSESDFVDVTATSKGKGTAGV 127

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH FGGLRATHGV   HRS GS G    PG+V K  +MAGRMG  RVTV+NL+V SVD
Sbjct: 128 MKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQNLQVHSVD 187

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +RG++LV+G VPG  K S ++VR + K A
Sbjct: 188 AERGIMLVRGAVPG-PKGSLLVVRSAAKKA 216


>gi|254670741|emb|CBA06972.1| 50S ribosomal protein L3 [Neisseria meningitidis alpha153]
 gi|261391678|emb|CAX49127.1| 50S ribosomal protein L3 [Neisseria meningitidis 8013]
          Length = 214

 Score =  184 bits (466), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++    L  G   + S F VGQLVDVTG + GKG
Sbjct: 61  VNKTEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPGA  NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGA-VNSDVVVRPSVK 211


>gi|241759650|ref|ZP_04757751.1| 50S ribosomal protein L3 [Neisseria flavescens SK114]
 gi|241320022|gb|EER56403.1| 50S ribosomal protein L3 [Neisseria flavescens SK114]
          Length = 214

 Score =  184 bits (466), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/212 (49%), Positives = 135/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++    L  G   + S F VGQLVDVTG + GKG
Sbjct: 61  VNKTEAGHFAKAGVEAGRGLVEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  RA+HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRASHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPG+  NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGS-VNSDVVVRPSVK 211


>gi|282855208|ref|ZP_06264540.1| 50S ribosomal protein L3 [Propionibacterium acnes J139]
 gi|282581796|gb|EFB87181.1| 50S ribosomal protein L3 [Propionibacterium acnes J139]
 gi|314924185|gb|EFS88016.1| 50S ribosomal protein L3 [Propionibacterium acnes HL001PA1]
 gi|314965095|gb|EFT09194.1| 50S ribosomal protein L3 [Propionibacterium acnes HL082PA2]
 gi|314982251|gb|EFT26344.1| 50S ribosomal protein L3 [Propionibacterium acnes HL110PA3]
 gi|315090438|gb|EFT62414.1| 50S ribosomal protein L3 [Propionibacterium acnes HL110PA4]
 gi|315093673|gb|EFT65649.1| 50S ribosomal protein L3 [Propionibacterium acnes HL060PA1]
 gi|315103967|gb|EFT75943.1| 50S ribosomal protein L3 [Propionibacterium acnes HL050PA2]
 gi|327326712|gb|EGE68498.1| 50S ribosomal protein L3 [Propionibacterium acnes HL103PA1]
          Length = 223

 Score =  183 bits (465), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 101/210 (48%), Positives = 130/210 (61%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+  KLGMT +++   R +PVTV+    C V   RT + +GY AVQ+G G  K K V+K
Sbjct: 9   GVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKKVTK 68

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ L E R   D     +G   +   F+    VDVTG + GKG +G 
Sbjct: 69  PEAGHFEKAGVTPRRHLVELRTA-DASEYTLGQEIAADVFSESDFVDVTGTSKGKGTAGV 127

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH FGGLRATHGV   HRS GS G    PG+V K  +MAGRMG  RVTV+NL+V SVD
Sbjct: 128 MKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQNLQVHSVD 187

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +RG++LV+G VPG  K S ++VR + K A
Sbjct: 188 AERGIMLVRGAVPGP-KGSLLVVRSAAKKA 216


>gi|289623849|ref|ZP_06456803.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|330869431|gb|EGH04140.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 211

 Score =  183 bits (465), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ +++ +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIESNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR+++ D     G   +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209


>gi|319942173|ref|ZP_08016489.1| 50S ribosomal protein L3 [Sutterella wadsworthensis 3_1_45B]
 gi|319804226|gb|EFW01118.1| 50S ribosomal protein L3 [Sutterella wadsworthensis 3_1_45B]
          Length = 214

 Score =  183 bits (465), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 102/211 (48%), Positives = 136/211 (64%), Gaps = 4/211 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT ++  +G  +PVTVL + N +V + +T D +GY AVQV  G  K   VSK
Sbjct: 6   GLVGRKIGMTRIFTDDGVSVPVTVLDVSNNRVTMVKTQDTDGYTAVQVAFGTKKPSRVSK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRV--QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           P+ G F+   V     L EFR+  +K  +  P G   S   FT GQ VDVTG TIGKGF+
Sbjct: 66  PLAGQFAKAGVEAACTLKEFRIDAEKAAEFKP-GQTISVEIFTEGQKVDVTGTTIGKGFA 124

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           GA+KRH+F   RA+HG S++ R+ GS G RQDPGRVF  K+MAG +G  + T +NL V  
Sbjct: 125 GAIKRHHFSSNRASHGNSVTTRAPGSIGNRQDPGRVFPGKRMAGHLGDVQRTTQNLVVAR 184

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VD +R L+LV+G VPGA K   ++VR + K+
Sbjct: 185 VDKERQLLLVRGAVPGA-KGGEVIVRPAVKA 214


>gi|227538718|ref|ZP_03968767.1| ribosomal protein L3 [Sphingobacterium spiritivorum ATCC 33300]
 gi|300770251|ref|ZP_07080130.1| 50S ribosomal protein L3 [Sphingobacterium spiritivorum ATCC 33861]
 gi|227241637|gb|EEI91652.1| ribosomal protein L3 [Sphingobacterium spiritivorum ATCC 33300]
 gi|300762727|gb|EFK59544.1| 50S ribosomal protein L3 [Sphingobacterium spiritivorum ATCC 33861]
          Length = 205

 Score =  183 bits (464), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 99/205 (48%), Positives = 133/205 (64%), Gaps = 4/205 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +YN EG+ IP TV+    C V   RT DK+GY AVQ+G GEAK KN +
Sbjct: 2   SGIIGKKVGMTSLYNEEGKNIPCTVIEAGPCVVTQIRTEDKDGYSAVQLGFGEAKEKNTT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
             ++G F+  N +PK+KL EF+   D+  L  G V   + F  G+ VDV G + GKGF G
Sbjct: 62  ASLKGHFAKANTTPKRKLVEFKTFPDEKQL--GDVVDVTIFEEGEYVDVVGTSKGKGFQG 119

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            MKRH FGG+  ATHG     R+ GS G    P RVFK  +MAGR GG+RV V+NL+V+ 
Sbjct: 120 VMKRHGFGGVGGATHGQHNRLRAPGSLGASSWPSRVFKGMRMAGRTGGDRVKVQNLQVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           V  ++ LI+V G +PGA K S+++V
Sbjct: 180 VYAEQNLIVVSGSIPGA-KGSYVIV 203


>gi|255067458|ref|ZP_05319313.1| 50S ribosomal protein L3 [Neisseria sicca ATCC 29256]
 gi|255048253|gb|EET43717.1| 50S ribosomal protein L3 [Neisseria sicca ATCC 29256]
          Length = 238

 Score =  183 bits (464), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 25  MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 84

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++    L  G   + S F VGQLVDVTG + GKG
Sbjct: 85  VNKAEAGHFAKAGVEAGRGLIEFALAEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 144

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 145 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 204

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPGA  NS ++VR S K
Sbjct: 205 VRVDAERQLLLVKGAVPGA-VNSDVVVRPSVK 235


>gi|154507864|ref|ZP_02043506.1| hypothetical protein ACTODO_00346 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797498|gb|EDN79918.1| hypothetical protein ACTODO_00346 [Actinomyces odontolyticus ATCC
           17982]
          Length = 221

 Score =  183 bits (464), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 93/209 (44%), Positives = 133/209 (63%), Gaps = 2/209 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RKLGMT V++ +G  +P+TV+ +    V   RT + +GY A+Q+G GE   + V+KP
Sbjct: 15  LLGRKLGMTQVWDADGHLVPLTVVQVGTNVVTQVRTDEVDGYSAIQLGFGEIDSRKVTKP 74

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           ++G F    V+P++ L E R  + D    +G     + F  G+ VDV+G T GKGF+G M
Sbjct: 75  LQGHFEKAGVAPRRHLVEVRTSEHDSY-ELGQELDATTFEAGEGVDVSGTTKGKGFAGVM 133

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH F G+ A+HG   +HR  GS G    PGR+FK  +MAGRMGGNR TV+NL + +VD 
Sbjct: 134 KRHGFAGVSASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGGNRRTVQNLTIQAVDA 193

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           ++GL+L+ G +PG  KN  +LVR S K A
Sbjct: 194 EKGLLLISGAIPGP-KNGVVLVRSSVKGA 221


>gi|330962525|gb|EGH62785.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 211

 Score =  183 bits (464), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR+++ D     G + +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDLINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209


>gi|70732882|ref|YP_262650.1| 50S ribosomal protein L3 [Pseudomonas fluorescens Pf-5]
 gi|109893539|sp|Q4K533|RL3_PSEF5 RecName: Full=50S ribosomal protein L3
 gi|68347181|gb|AAY94787.1| ribosomal protein L3 [Pseudomonas fluorescens Pf-5]
          Length = 211

 Score =  183 bits (464), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/212 (47%), Positives = 136/212 (64%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + ++EFR+++ +     G + +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRGVWEFRLEEGE--YQAGDLINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209


>gi|294341610|emb|CAZ90027.1| 50S ribosomal protein L3 [Thiomonas sp. 3As]
          Length = 215

 Score =  183 bits (464), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 136/212 (64%), Gaps = 4/212 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT V+  +G  I VTVL     +V   RT D +GY AVQV  G  K   ++K
Sbjct: 2   GLVTRKVGMTRVFTDDGASIAVTVLDASGNRVSQVRTQDVDGYSAVQVAYGSRKPSRLTK 61

Query: 64  PMRGFFSSVNVSPKKKLFEFRV--QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
              G  +   V P + L EF +  +K  D  P G+    S F VGQ+VD  G++IGKGF+
Sbjct: 62  GQAGHLAKAGVEPAEILKEFDLPAEKAADYAP-GATVPASLFQVGQMVDAQGVSIGKGFA 120

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G++KRHNF   RA+HG S++ R+ GS G  QDPGRVF  K+MAG+MG   VTV+NLEVV 
Sbjct: 121 GSIKRHNFSSNRASHGNSVTTRAPGSIGMAQDPGRVFPGKRMAGQMGNETVTVQNLEVVR 180

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           +D+ R LILVKG VPG+ ++ ++ +R + KSA
Sbjct: 181 IDEARQLILVKGAVPGS-RSGFVFLRPAVKSA 211


>gi|296113797|ref|YP_003627735.1| 50S ribosomal protein L3 [Moraxella catarrhalis RH4]
 gi|295921491|gb|ADG61842.1| 50S ribosomal protein L3 [Moraxella catarrhalis RH4]
 gi|326562142|gb|EGE12470.1| 50S ribosomal protein L3 [Moraxella catarrhalis 7169]
 gi|326564493|gb|EGE14719.1| 50S ribosomal protein L3 [Moraxella catarrhalis 46P47B1]
 gi|326565676|gb|EGE15839.1| 50S ribosomal protein L3 [Moraxella catarrhalis 12P80B1]
 gi|326566245|gb|EGE16397.1| 50S ribosomal protein L3 [Moraxella catarrhalis 103P14B1]
 gi|326567103|gb|EGE17225.1| 50S ribosomal protein L3 [Moraxella catarrhalis BC1]
 gi|326568367|gb|EGE18447.1| 50S ribosomal protein L3 [Moraxella catarrhalis BC7]
 gi|326572268|gb|EGE22263.1| 50S ribosomal protein L3 [Moraxella catarrhalis BC8]
 gi|326574610|gb|EGE24550.1| 50S ribosomal protein L3 [Moraxella catarrhalis O35E]
 gi|326574866|gb|EGE24796.1| 50S ribosomal protein L3 [Moraxella catarrhalis 101P30B1]
 gi|326576190|gb|EGE26105.1| 50S ribosomal protein L3 [Moraxella catarrhalis CO72]
          Length = 212

 Score =  183 bits (464), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 98/213 (46%), Positives = 137/213 (64%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V +K GMT V+   G  IPVTV+ +D  ++   +T+D +GY A+Q+  GE +   
Sbjct: 1   MAIGLVGKKCGMTRVFTEAGVSIPVTVVEVDANRISQIKTVDTDGYNAIQITTGERRDSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + ++EFR ++ D +   +G       F VGQLVDVTG + GKG
Sbjct: 61  VTAAQKGHFAKAGVAAGRGVWEFRAEESDLEGREIGGNILADIFEVGQLVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KRHNF    ATHG S+SHR  GSTG  Q PGRVFK KKM G+MG  RVTV+ LE+
Sbjct: 121 FQGGVKRHNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMPGQMGNKRVTVQGLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VSVD ++G++++KG VPGA     ++VR S K+
Sbjct: 181 VSVDAEKGVLVIKGAVPGANGGD-VIVRPSVKA 212


>gi|145606142|ref|XP_365809.2| hypothetical protein MGG_02511 [Magnaporthe oryzae 70-15]
 gi|145013870|gb|EDJ98511.1| hypothetical protein MGG_02511 [Magnaporthe oryzae 70-15]
          Length = 396

 Score =  182 bits (463), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 96/200 (48%), Positives = 126/200 (63%), Gaps = 1/200 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+GVVA K GMT +++  G RIP TVL LD+ QV++++T +  GY AVQVGA   +   
Sbjct: 105 VRAGVVAIKKGMTALFSRRGTRIPCTVLQLDSVQVLLNKTRENAGYFAVQVGAVPKRPST 164

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
              P  G+F +  V PK+ + EFRV+ +  LLPVG    P +F VGQ VDV G + G GF
Sbjct: 165 ALAPQLGYFEAKGVEPKQHVAEFRVRNEQGLLPVGVQLQPDWFHVGQWVDVRGTSRGMGF 224

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179
            G MKRH F G   +HG S++HR+ GS G  Q  G RV   KKM GRMGG   T +NL V
Sbjct: 225 EGGMKRHGFSGQNKSHGNSLNHRTGGSVGPSQGSGSRVHPGKKMPGRMGGQSATAQNLSV 284

Query: 180 VSVDDKRGLILVKGCVPGAK 199
           + VD+  G+++VKG V G K
Sbjct: 285 LKVDNDLGIVVVKGAVAGPK 304


>gi|147799626|emb|CAN75145.1| hypothetical protein VITISV_033846 [Vitis vinifera]
          Length = 243

 Score =  182 bits (463), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 97/192 (50%), Positives = 128/192 (66%), Gaps = 1/192 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G +A K GM+ +++  G R+P+TVL LD+  V   +T +K G  A+QVG G+ K K++
Sbjct: 7   RTGAIAVKCGMSALWDKWGARVPITVLWLDDNIVSQVKTFEKEGXNALQVGCGQKKAKHL 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F +  V  K+KL EF V  +D LLPVG+     +F  GQ VDVTG+T GKGF 
Sbjct: 67  TKPEVGHFRAQGVPLKRKLREFPVT-EDALLPVGTTIGVRHFVPGQYVDVTGITRGKGFQ 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR  F G+ A+HG S+SHRS GSTG R  PG+VFK KKM GRMGG + TVKN+ V  
Sbjct: 126 GGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGKQRTVKNVWVYK 185

Query: 182 VDDKRGLILVKG 193
           +D  R L+ V+G
Sbjct: 186 IDPTRNLMWVRG 197


>gi|116199553|ref|XP_001225588.1| hypothetical protein CHGG_07932 [Chaetomium globosum CBS 148.51]
 gi|88179211|gb|EAQ86679.1| hypothetical protein CHGG_07932 [Chaetomium globosum CBS 148.51]
          Length = 380

 Score =  182 bits (463), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 134/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+GV+A K GMT      G RI  TVL LD  Q V+++T  ++GY AVQVG GE    N
Sbjct: 86  LRAGVLAVKKGMTVFMGRTGARIACTVLQLDRVQTVLNKTRARHGYWAVQVGMGERNPGN 145

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V  P+ G++ +  ++PK+ L EFRV+    LLPVG    P +F VGQ VDV   + G GF
Sbjct: 146 VGAPLLGYYEAKGMAPKEVLAEFRVRDQSGLLPVGVQLMPDWFHVGQRVDVRSNSRGMGF 205

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179
           +G MKRH F G  A+HG S +HR+ GS G  Q  G RV   KKM GRMG  RVT++NL V
Sbjct: 206 AGGMKRHGFSGQEASHGNSKNHRTIGSAGPSQGSGSRVLPGKKMPGRMGNQRVTIQNLPV 265

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +  D++ G+++VKGCV G  K + I V+D+ K
Sbjct: 266 LIADNELGILVVKGCVAGP-KGAVIQVQDACK 296


>gi|121997649|ref|YP_001002436.1| ribosomal protein L3 [Halorhodospira halophila SL1]
 gi|166233149|sp|A1WVC2|RL3_HALHL RecName: Full=50S ribosomal protein L3
 gi|121589054|gb|ABM61634.1| LSU ribosomal protein L3P [Halorhodospira halophila SL1]
          Length = 216

 Score =  182 bits (463), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 103/217 (47%), Positives = 134/217 (61%), Gaps = 6/217 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT V+  EG  IPVTV+  D  +V   +T + +GY AVQV AG  K + 
Sbjct: 1   MAIGIVGRKRGMTRVFTEEGGSIPVTVVEADPNRVTQVKTEESDGYRAVQVTAGRRKPQR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQK-----DDDLLPVGSVFSPSYFTVGQLVDVTGMT 115
           V KP  G F+   V   + ++EFR+ K     D+++   G       F  GQ VDVTG T
Sbjct: 61  VRKPEAGHFARAGVEAGRGVWEFRLDKGQRASDEEMPETGGSIDVGGFEAGQKVDVTGTT 120

Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
            G+GF+G ++RHNF   R THG S SHR  GS G  Q PGRVFK KKMAG+MG  R T++
Sbjct: 121 KGRGFAGTVRRHNFRAQRNTHGNSKSHRVPGSIGQCQSPGRVFKGKKMAGQMGNRRATIQ 180

Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           NLEVV VD +R L+L++G VPGA   S ++VR + K+
Sbjct: 181 NLEVVRVDSERNLLLIRGAVPGA-VGSDLIVRPASKA 216


>gi|328675407|gb|AEB28082.1| LSU ribosomal protein L3p (L3e) [Francisella cf. novicida 3523]
          Length = 210

 Score =  182 bits (462), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 94/198 (47%), Positives = 128/198 (64%), Gaps = 1/198 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++  +G  IPVTV+ ++  +V   +T + +GY A+QV  G  K  N
Sbjct: 1   MSLGLVGRKCGMTRIFTEDGVSIPVTVVQVEANKVTQVKTTETDGYNAIQVTTGFKKRSN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP  G ++   V P + L+EF +    +   VG+    + F  GQ VDV G++ GKGF
Sbjct: 61  VNKPAAGHYAKAGVEPGRGLWEFTIDNASEY-EVGASIDATIFQAGQKVDVRGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRHNF    ATHG S+SHR HGSTG  Q PGRVFKNKKMAG +G   VT+++LEVV
Sbjct: 120 QGGVKRHNFATQDATHGNSLSHRVHGSTGQNQTPGRVFKNKKMAGHLGNENVTIQSLEVV 179

Query: 181 SVDDKRGLILVKGCVPGA 198
            VD + GL+L+KG +PG+
Sbjct: 180 RVDAENGLLLLKGGIPGS 197


>gi|260779503|ref|ZP_05888393.1| LSU ribosomal protein L3p (L3e) [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260604312|gb|EEX30616.1| LSU ribosomal protein L3p (L3e) [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 209

 Score =  182 bits (462), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 98/209 (46%), Positives = 134/209 (64%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+  EG  IPVTV+ ++  +V   RTL+ +GY A+QV  G  K   VSK
Sbjct: 3   GLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVRTLETDGYAAIQVTTGAKKANRVSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF GA
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELTVELFNETKKVDVTGTSKGKGFQGA 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 VKRWNFSTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|311109612|ref|YP_003982465.1| 50S ribosomal protein L3 [Achromobacter xylosoxidans A8]
 gi|310764301|gb|ADP19750.1| ribosomal protein L3 [Achromobacter xylosoxidans A8]
          Length = 229

 Score =  182 bits (462), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 101/213 (47%), Positives = 133/213 (62%), Gaps = 3/213 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+V RK+GMT ++  EG  IPVTVL + N +V   ++L+ +GY A+QV  G  +   V
Sbjct: 12  RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQVKSLETDGYAAIQVAYGTRRASRV 71

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFS-PSYFTVGQLVDVTGMTIGKG 119
           ++P  G ++         L EFR+          GSV +  S F  GQ VDVTG TIGKG
Sbjct: 72  AQPQTGHYAKAGAEAGSILKEFRLDPARAAEFAAGSVIAVESVFEAGQQVDVTGTTIGKG 131

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRHNFG  RA+HG S SHR  GS G  QDPGR+F  K+MAG +G    TV+NL+V
Sbjct: 132 FAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMAGHLGDVTRTVQNLDV 191

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +RGL+LVKG VPG    + I+VR + K+
Sbjct: 192 VRVDVERGLLLVKGAVPG-HAGADIIVRPAIKA 223


>gi|330988282|gb|EGH86385.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 211

 Score =  182 bits (462), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEEADGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR+++ D     G   +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209


>gi|255536154|ref|YP_003096525.1| LSU ribosomal protein L3p (L3e) [Flavobacteriaceae bacterium
           3519-10]
 gi|255342350|gb|ACU08463.1| LSU ribosomal protein L3p (L3e) [Flavobacteriaceae bacterium
           3519-10]
          Length = 208

 Score =  182 bits (462), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 96/206 (46%), Positives = 136/206 (66%), Gaps = 3/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ +P TV+    C V+  RT++K+GY A Q+G  +   KNV 
Sbjct: 2   SGIIGKKIGMTSLFDENGKNMPCTVIQAGPCSVLQVRTIEKDGYKAAQLGFDDKSEKNVG 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K + G F     +PK KL EF   +  D L VG       F+ G+ VDVTG + GKGF G
Sbjct: 62  KALIGHFKKAGSAPKAKLVEF-YHEFVDKLSVGDEVKVDLFSQGEFVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRHNFGG ++ATHG     R+ GS G   DP RVFK  +MAGRMGG +VTV+NL+V+ 
Sbjct: 121 VVKRHNFGGVMQATHGQHNRLRAPGSIGAGSDPSRVFKGMRMAGRMGGKQVTVQNLQVLR 180

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           VD+++ L++VKG VPGA KNS++++R
Sbjct: 181 VDEEQNLLVVKGAVPGA-KNSYVIIR 205


>gi|229592903|ref|YP_002875022.1| 50S ribosomal protein L3 [Pseudomonas fluorescens SBW25]
 gi|259709731|sp|C3K2X6|RL3_PSEFS RecName: Full=50S ribosomal protein L3
 gi|229364769|emb|CAY52766.1| 50S ribosomal protein L3 [Pseudomonas fluorescens SBW25]
          Length = 211

 Score =  182 bits (462), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR++  D     G + +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEDGD--YQAGDLINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209


>gi|77461300|ref|YP_350807.1| 50S ribosomal protein L3 [Pseudomonas fluorescens Pf0-1]
 gi|109893541|sp|Q3K5Y8|RL3_PSEPF RecName: Full=50S ribosomal protein L3
 gi|77385303|gb|ABA76816.1| 50S ribosomal protein L3 [Pseudomonas fluorescens Pf0-1]
          Length = 211

 Score =  182 bits (462), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 100/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKAGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR+++ +     G + +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEEGE--YQAGDLINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209


>gi|66047775|ref|YP_237616.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. syringae B728a]
 gi|257483185|ref|ZP_05637226.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|289648942|ref|ZP_06480285.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|289675488|ref|ZP_06496378.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. syringae FF5]
 gi|298489097|ref|ZP_07007119.1| LSU ribosomal protein L3p (L3e) [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|81307859|sp|Q4ZMP4|RL3_PSEU2 RecName: Full=50S ribosomal protein L3
 gi|63258482|gb|AAY39578.1| Ribosomal protein L3 [Pseudomonas syringae pv. syringae B728a]
 gi|298156409|gb|EFH97507.1| LSU ribosomal protein L3p (L3e) [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|330891931|gb|EGH24592.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. mori str.
           301020]
 gi|330953197|gb|EGH53457.1| 50S ribosomal protein L3 [Pseudomonas syringae Cit 7]
 gi|330969821|gb|EGH69887.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. aceris str.
           M302273PT]
 gi|330976640|gb|EGH76684.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. aptata str. DSM
           50252]
 gi|331012413|gb|EGH92469.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 211

 Score =  182 bits (462), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR+++ D     G   +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209


>gi|254237126|ref|ZP_04930449.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa C3719]
 gi|126169057|gb|EAZ54568.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa C3719]
          Length = 211

 Score =  182 bits (462), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 100/212 (47%), Positives = 136/212 (64%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV AGE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEVEPNRVTQFKTEETDGYRAVQVTAGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+  NV+  + ++EFR+   ++   VG   +   F  GQ+VDVTG + GKGF
Sbjct: 61  VTKAQAGHFAKANVAAGRGVWEFRL--GEEQYAVGDQITVDLFQAGQMVDVTGESKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G +G  RVTV++LE+V
Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHLGAERVTVQSLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA     ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGD-VIVRPAAKA 209


>gi|237797432|ref|ZP_04585893.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|302189277|ref|ZP_07265950.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. syringae 642]
 gi|331020282|gb|EGI00339.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 211

 Score =  182 bits (462), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR+++ D     G   +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQTGDQINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209


>gi|254506374|ref|ZP_05118516.1| ribosomal protein L3 [Vibrio parahaemolyticus 16]
 gi|219550548|gb|EED27531.1| ribosomal protein L3 [Vibrio parahaemolyticus 16]
          Length = 209

 Score =  182 bits (462), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 98/209 (46%), Positives = 135/209 (64%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+  EG  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   VSK
Sbjct: 3   GLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGAKKANRVSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF GA
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGAELTVELFNETKKVDVTGTSKGKGFQGA 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|77165787|ref|YP_344312.1| ribosomal protein L3 [Nitrosococcus oceani ATCC 19707]
 gi|254434228|ref|ZP_05047736.1| ribosomal protein L3 [Nitrosococcus oceani AFC27]
 gi|109893530|sp|Q3J8R4|RL3_NITOC RecName: Full=50S ribosomal protein L3
 gi|76884101|gb|ABA58782.1| LSU ribosomal protein L3P [Nitrosococcus oceani ATCC 19707]
 gi|207090561|gb|EDZ67832.1| ribosomal protein L3 [Nitrosococcus oceani AFC27]
          Length = 215

 Score =  182 bits (462), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 99/216 (45%), Positives = 142/216 (65%), Gaps = 4/216 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  EG  IPVTV+     ++   +TL+++GY AVQV  GE +   
Sbjct: 1   MAIGLIGRKVGMTRVFTDEGASIPVTVIEATPNRISQVKTLEQDGYQAVQVTVGERRPAR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           V+  ++G F+  NV P +KL EFR   ++  D+   G       F VGQ VDVTG+T G+
Sbjct: 61  VTSSLKGHFAKANVEPGRKLQEFRFGAEEGRDIKASGE-LKVDLFEVGQKVDVTGITRGR 119

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF+G ++R++FGG  A+HG S+SHR+ GS G  Q PGRVFK KKMAG+MG  R TV+NLE
Sbjct: 120 GFAGVVRRYHFGGGDASHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGQMGNVRRTVQNLE 179

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           +V +D+ R L+L+KG +PGA     ++V+ + K+ V
Sbjct: 180 LVRIDEGRQLLLIKGAIPGAPGGD-VIVKPAVKTVV 214


>gi|319639549|ref|ZP_07994296.1| 50S ribosomal protein L3 [Neisseria mucosa C102]
 gi|317399120|gb|EFV79794.1| 50S ribosomal protein L3 [Neisseria mucosa C102]
          Length = 214

 Score =  182 bits (462), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/212 (48%), Positives = 134/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++    L  G   + S F VGQLVDVTG + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLVEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPG+  NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGS-VNSDVVVRPSVK 211


>gi|312963368|ref|ZP_07777851.1| 50S ribosomal protein L3 [Pseudomonas fluorescens WH6]
 gi|311282448|gb|EFQ61046.1| 50S ribosomal protein L3 [Pseudomonas fluorescens WH6]
          Length = 211

 Score =  182 bits (461), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR++  D     G + +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEDGD--YKAGDLINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209


>gi|330812075|ref|YP_004356537.1| 50S ribosomal protein L3 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380183|gb|AEA71533.1| 50S ribosomal protein L3 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 211

 Score =  182 bits (461), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 100/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR+++ +     G + +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEEGE--YQAGDLINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209


>gi|225076395|ref|ZP_03719594.1| hypothetical protein NEIFLAOT_01440 [Neisseria flavescens
           NRL30031/H210]
 gi|224952243|gb|EEG33452.1| hypothetical protein NEIFLAOT_01440 [Neisseria flavescens
           NRL30031/H210]
          Length = 214

 Score =  182 bits (461), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 103/212 (48%), Positives = 134/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++    L  G   + S F VGQLVDVTG + GKG
Sbjct: 61  VNKTEAGHFAKAGVEAGRGLVEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPG+  NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGS-VNSDVVVRPSVK 211


>gi|261197061|ref|XP_002624933.1| 50S ribosomal protein L3 [Ajellomyces dermatitidis SLH14081]
 gi|239595563|gb|EEQ78144.1| 50S ribosomal protein L3 [Ajellomyces dermatitidis SLH14081]
 gi|239606530|gb|EEQ83517.1| 50S ribosomal protein L3 [Ajellomyces dermatitidis ER-3]
 gi|327356287|gb|EGE85144.1| 50S ribosomal protein L3 [Ajellomyces dermatitidis ATCC 18188]
          Length = 301

 Score =  182 bits (461), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 94/201 (46%), Positives = 132/201 (65%), Gaps = 2/201 (0%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GMT ++++E G+RIP TVL LD  QVV H+TL KNGY AVQVG G    +
Sbjct: 71  LRTGALAIKKGMTAIFDLETGKRIPCTVLQLDRVQVVAHKTLKKNGYYAVQVGCGWKHER 130

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            V++PM G F++  V+PK+ + EFRV+ ++ LLP+G   +  +F  GQ VD    + G G
Sbjct: 131 AVTRPMLGHFAANGVAPKRHIHEFRVKDENGLLPIGETINADWFQEGQYVDARSNSRGMG 190

Query: 120 FSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKRH F G   +HGVS++HR    S   +    RV+  KKMAG MG  RVT +NL+
Sbjct: 191 FAGVMKRHGFHGQDRSHGVSLTHRSMGSSGPGQGGGSRVYPGKKMAGNMGNERVTQQNLK 250

Query: 179 VVSVDDKRGLILVKGCVPGAK 199
           V+ VD ++G+++V G V G K
Sbjct: 251 VLKVDAEKGIVVVNGSVSGPK 271


>gi|119188359|ref|XP_001244786.1| hypothetical protein CIMG_04227 [Coccidioides immitis RS]
          Length = 298

 Score =  182 bits (461), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 100/213 (46%), Positives = 138/213 (64%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GM+ V + E G+R   T+L LD  +V+ H+T  K+GY AVQVGAG     
Sbjct: 72  LRTGALAIKKGMSAVIDPETGKRTVCTILQLDRVEVISHKTRQKHGYFAVQVGAGWKHES 131

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV+KPM G F++  VSPK+ + EFRV+ +  LLPVG + +  +F  GQ VDV   + G G
Sbjct: 132 NVTKPMLGHFAANGVSPKRYVEEFRVRDEAGLLPVGQMINADWFQEGQFVDVRSKSRGMG 191

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKR  F G   +HGVS++HRS G+TG  Q  G RV+  KKMAG MG   VT++NL 
Sbjct: 192 FTGVMKRWGFHGQDRSHGVSLTHRSLGTTGPSQGGGSRVYPGKKMAGNMGNTPVTIQNLR 251

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V+ VD ++GL++VKG V G  K   + + D+ K
Sbjct: 252 VLQVDPEKGLVVVKGSV-GGPKGRCVKIHDAIK 283


>gi|325191529|emb|CCA25903.1| 50S ribosomal protein L32 putative [Albugo laibachii Nc14]
          Length = 280

 Score =  181 bits (460), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 102/210 (48%), Positives = 132/210 (62%), Gaps = 2/210 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K+GM  V++  G     TVL ++ CQV   +T D +G+ A+Q+G G  K +NV
Sbjct: 38  RTGLLAVKIGMISVWDYYGVAHGCTVLQVEKCQVTQVKTSDIHGFNALQLGVGLRKPRNV 97

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP+ G  +   V PK++L EFRV  +D LL  G+  +  +F  GQ VDV G + GKGF 
Sbjct: 98  VKPLMGHLNKAGVPPKRQLQEFRVS-EDALLAAGTTLTAMHFVPGQYVDVCGTSKGKGFQ 156

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MK HNF G  A+HG S +HR  GSTG  QDPGRVFK KKM GRMG  RVT  NL +V 
Sbjct: 157 GVMKLHNFAGQPASHGNSKTHRHMGSTGQCQDPGRVFKGKKMPGRMGNKRVTRDNLWIVK 216

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +D  R L+ VKG VPG  K S + V D+ K
Sbjct: 217 IDTVRNLLYVKGSVPGT-KGSIVRVTDARK 245


>gi|146281170|ref|YP_001171323.1| 50S ribosomal protein L3 [Pseudomonas stutzeri A1501]
 gi|166233183|sp|A4VHN0|RL3_PSEU5 RecName: Full=50S ribosomal protein L3
 gi|145569375|gb|ABP78481.1| ribosomal protein L3 [Pseudomonas stutzeri A1501]
 gi|327479323|gb|AEA82633.1| 50S ribosomal protein L3 [Pseudomonas stutzeri DSM 4166]
          Length = 211

 Score =  181 bits (460), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 100/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT V+  +G  IPVTV+ ++  +V   +  + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRVFTEDGVSIPVTVIEIEPNRVTQFKNEESDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+  NV+  + ++EFR++ ++    VG   +   F  GQLVDVTG + GKGF
Sbjct: 61  VTKAQAGHFAKANVAAGRGVWEFRLEGEE--FQVGDQINAEIFQAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LE+V
Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA     + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGD-VFVRPAVKA 209


>gi|320322322|gb|EFW78416.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320331980|gb|EFW87916.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330879369|gb|EGH13518.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 211

 Score =  181 bits (460), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR+++ D     G   +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV+ LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQALEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209


>gi|303316364|ref|XP_003068184.1| 54S ribosomal protein L9, mitochondrial precursor, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|240107865|gb|EER26039.1| 54S ribosomal protein L9, mitochondrial precursor, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|320037921|gb|EFW19857.1| 50S ribosomal protein L3 [Coccidioides posadasii str. Silveira]
          Length = 291

 Score =  181 bits (460), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 99/213 (46%), Positives = 138/213 (64%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GM+ V + E G+R   T+L LD  +V+ H+T  K+GY AVQVGAG     
Sbjct: 72  LRTGALAIKKGMSAVIDPETGKRTVCTILQLDRVEVISHKTRQKHGYFAVQVGAGWKHES 131

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV+KPM G F++  VSPK+ + EFRV+ +  LLP+G + +  +F  GQ VDV   + G G
Sbjct: 132 NVTKPMLGHFAANGVSPKRYVEEFRVRDEAGLLPIGQMINADWFQEGQFVDVRSKSRGMG 191

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKR  F G   +HGVS++HRS G+TG  Q  G RV+  KKMAG MG   VT++NL 
Sbjct: 192 FTGVMKRWGFHGQDRSHGVSLTHRSLGTTGPSQGGGSRVYPGKKMAGNMGNTPVTIQNLR 251

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V+ VD ++GL++VKG V G  K   + + D+ K
Sbjct: 252 VLQVDPEKGLVVVKGSV-GGPKGRCVKIHDAIK 283


>gi|118595335|ref|ZP_01552682.1| 50S ribosomal protein L3 [Methylophilales bacterium HTCC2181]
 gi|118441113|gb|EAV47740.1| 50S ribosomal protein L3 [Methylophilales bacterium HTCC2181]
          Length = 216

 Score =  181 bits (460), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 100/212 (47%), Positives = 135/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  EG  IPVTVL +   +V   + ++ +GY ++Q+  G +K   
Sbjct: 1   MSLGLIGRKVGMTRVFTDEGASIPVTVLEVVPNRVTQIKKINSDGYSSLQLAYGRSKSTK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++K + G ++  +V     L E R+ +++       S  S   F VGQ VDVTG TIGKG
Sbjct: 61  LNKSLVGHYAKASVEAGLGLHELRLSEEEISNYTNESSLSVEIFQVGQKVDVTGTTIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KRH+F   RATHGVSISH SHGSTG  QDPGRVF  KKMAG +G  + T +NLEV
Sbjct: 121 FQGPIKRHHFSSNRATHGVSISHNSHGSTGQCQDPGRVFPGKKMAGHLGDKKRTTQNLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V +D  R LIL+KG VPG+ K S +L+R + K
Sbjct: 181 VRIDSPRNLILIKGAVPGS-KGSDVLIRPAVK 211


>gi|126274899|ref|XP_001387659.1| predicted protein [Scheffersomyces stipitis CBS 6054]
 gi|126213529|gb|EAZ63636.1| predicted protein [Pichia stipitis CBS 6054]
          Length = 262

 Score =  181 bits (459), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 91/199 (45%), Positives = 130/199 (65%), Gaps = 1/199 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  K GM   +   G +   TV+ +D+C+V+  +T++ +GY +V +G  + K+KNV
Sbjct: 42  RPGLLGIKRGMISWFTEAGEQFAATVIEIDSCEVIKQKTVESDGYWSVLLGQID-KLKNV 100

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           ++     F +  VSPK+ + EFRV+    L+PVG+     YF+VGQLVD+  ++ GKGF+
Sbjct: 101 NEKELVKFEAAGVSPKQNIGEFRVRDKSGLIPVGTELKADYFSVGQLVDIKAVSKGKGFA 160

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F GL A+HGVS+SHRS G  G  QDPGRV   KKMAGRMGG   TV N EV+ 
Sbjct: 161 GVMKRHGFKGLNASHGVSLSHRSAGGMGGNQDPGRVLPGKKMAGRMGGRNCTVFNNEVLH 220

Query: 182 VDDKRGLILVKGCVPGAKK 200
            D + G+++VKG +PG  +
Sbjct: 221 ADGEAGILVVKGQIPGPAR 239


>gi|323495504|ref|ZP_08100578.1| 50S ribosomal protein L3 [Vibrio sinaloensis DSM 21326]
 gi|323319385|gb|EGA72322.1| 50S ribosomal protein L3 [Vibrio sinaloensis DSM 21326]
          Length = 209

 Score =  181 bits (459), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 97/209 (46%), Positives = 135/209 (64%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+  EG  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   VSK
Sbjct: 3   GLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGAKKANRVSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR++ D++   VG+  +   F   + VDVTG + GKGF GA
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLENDEEF-AVGAELTVELFNDTKKVDVTGTSKGKGFQGA 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+L+KG VPG+   + ++V+ + K+
Sbjct: 182 AERNLLLIKGAVPGSTGGN-VIVKPAVKA 209


>gi|71736464|ref|YP_276706.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|109893538|sp|Q48D36|RL3_PSE14 RecName: Full=50S ribosomal protein L3
 gi|71557017|gb|AAZ36228.1| ribosomal protein L3 [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 211

 Score =  181 bits (459), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 100/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR+++ D     G   +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LE+V
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLELV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209


>gi|89095538|ref|ZP_01168443.1| 50S ribosomal protein L3 [Oceanospirillum sp. MED92]
 gi|89080213|gb|EAR59480.1| 50S ribosomal protein L3 [Oceanospirillum sp. MED92]
          Length = 212

 Score =  181 bits (459), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 99/212 (46%), Positives = 135/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK GMT V+N +G  +PVTV+ ++  +V   +T + +GY AVQV  G  K   
Sbjct: 1   MTVGLIGRKAGMTRVFNEDGVSVPVTVIEVEPNRVTAVKTEETDGYAAVQVTTGGKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SKP  G F+   V   + L+EFR+   D++  VG   + + F  GQ VDVTG + GKGF
Sbjct: 61  LSKPEAGNFAKAGVEAGRGLWEFRLSGGDEV-NVGEELTVARFEAGQKVDVTGQSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF    ATHG S+SHR+ GS G  Q PGRV+K KKMAG+MG  RVTV+ LEVV
Sbjct: 120 QGGVKRWNFSMQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGQMGNERVTVQTLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA     ++V+ + K+
Sbjct: 180 RVDAERNLLLIKGAVPGATGGD-VIVKPAVKA 210


>gi|302871498|ref|YP_003840134.1| 50S ribosomal protein L3 [Caldicellulosiruptor obsidiansis OB47]
 gi|302574357|gb|ADL42148.1| 50S ribosomal protein L3 [Caldicellulosiruptor obsidiansis OB47]
          Length = 210

 Score =  181 bits (459), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 103/212 (48%), Positives = 133/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V++ EGR IPVTV+    C VV  +T++K+GY A+QVG  + K   
Sbjct: 1   MTKGILGKKIGMTQVFDEEGRVIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+RG F+   V PK+ L E R+ KD D   VG       F  G+ VDVTG++  KGF
Sbjct: 61  LNKPLRGHFAKHGVKPKRYLRELRL-KDADKYEVGQEIRVDIFQPGERVDVTGISKAKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       +HG S+ HR  GS G    P R F  KKM GRMGG RVTV NL+VV
Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  R L+LVKG VPG  KNS +++RDS KS
Sbjct: 179 KVDPDRNLLLVKGSVPG-NKNSLLIIRDSVKS 209


>gi|167564417|ref|ZP_02357333.1| 50S ribosomal protein L3 [Burkholderia oklahomensis EO147]
 gi|167571563|ref|ZP_02364437.1| 50S ribosomal protein L3 [Burkholderia oklahomensis C6786]
          Length = 219

 Score =  181 bits (458), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 95/200 (47%), Positives = 126/200 (63%), Gaps = 1/200 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR+       L  G++  P  F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NFG  RA+HG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAK 199
             +D  R L+LVKG VPGAK
Sbjct: 181 ARIDADRKLLLVKGAVPGAK 200


>gi|15599459|ref|NP_252953.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa PAO1]
 gi|116052298|ref|YP_788856.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|152989623|ref|YP_001346223.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa PA7]
 gi|218889409|ref|YP_002438273.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa LESB58]
 gi|296387180|ref|ZP_06876679.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa PAb1]
 gi|42559696|sp|Q9HWD5|RL3_PSEAE RecName: Full=50S ribosomal protein L3
 gi|122261447|sp|Q02T80|RL3_PSEAB RecName: Full=50S ribosomal protein L3
 gi|166233180|sp|A6UZI8|RL3_PSEA7 RecName: Full=50S ribosomal protein L3
 gi|226730551|sp|B7V644|RL3_PSEA8 RecName: Full=50S ribosomal protein L3
 gi|9950480|gb|AAG07651.1|AE004841_29 50S ribosomal protein L3 [Pseudomonas aeruginosa PAO1]
 gi|115587519|gb|ABJ13534.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|150964781|gb|ABR86806.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa PA7]
 gi|218769632|emb|CAW25392.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa LESB58]
          Length = 211

 Score =  181 bits (458), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 99/212 (46%), Positives = 135/212 (63%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV AGE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEVEPNRVTQFKTEETDGYRAVQVTAGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+  NV+  + ++EFR+   ++    G   +   F  GQ+VDVTG + GKGF
Sbjct: 61  VTKAQAGHFAKANVAAGRGVWEFRL--GEEQYAAGDQITVDLFQAGQMVDVTGESKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G +G  RVTV++LE+V
Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHLGAERVTVQSLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA     ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGD-VIVRPAAKA 209


>gi|254483423|ref|ZP_05096652.1| ribosomal protein L3 [marine gamma proteobacterium HTCC2148]
 gi|214036297|gb|EEB76975.1| ribosomal protein L3 [marine gamma proteobacterium HTCC2148]
          Length = 211

 Score =  181 bits (458), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 100/212 (47%), Positives = 131/212 (61%), Gaps = 1/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT V+  +G  IPVTV+ +   +V   + L+ +GY A+QV  G  K   
Sbjct: 1   MAIGLVGRKSGMTRVFTEDGASIPVTVVEVSPNRVTQIKELETDGYRAIQVTTGNRKASK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK   G F+   V    KL EFR++  D+   VG   +   F VGQ+VDVTG + GKGF
Sbjct: 61  VSKSEAGHFAKAGVEAGTKLSEFRLEASDEAPEVGVELTVERFEVGQIVDVTGKSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF    ATHG SISHR++GS G  Q PGRVFK KKM+G MG  +VT + LEV+
Sbjct: 121 QGGIKRWNFTMQDATHGNSISHRANGSIGQCQTPGRVFKGKKMSGHMGSEQVTTQGLEVI 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA     ++VR + K+
Sbjct: 181 RVDAERNLLLIKGAVPGAPGGD-VVVRPTVKA 211


>gi|261250417|ref|ZP_05942992.1| LSU ribosomal protein L3p (L3e) [Vibrio orientalis CIP 102891]
 gi|260938986|gb|EEX94973.1| LSU ribosomal protein L3p (L3e) [Vibrio orientalis CIP 102891]
          Length = 209

 Score =  181 bits (458), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 98/209 (46%), Positives = 134/209 (64%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+  EG  IPVTV+ ++  +V   +TLD +GY A+QV  G  K   VSK
Sbjct: 3   GLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLDTDGYAAIQVTTGAKKANRVSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF GA
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGAELTVELFNDTKKVDVTGTSKGKGFQGA 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|28867854|ref|NP_790473.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213969214|ref|ZP_03397352.1| ribosomal protein L3 [Pseudomonas syringae pv. tomato T1]
 gi|301381721|ref|ZP_07230139.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tomato Max13]
 gi|302061079|ref|ZP_07252620.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tomato K40]
 gi|302130780|ref|ZP_07256770.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|42559621|sp|Q889X1|RL3_PSESM RecName: Full=50S ribosomal protein L3
 gi|28851090|gb|AAO54168.1| ribosomal protein L3 [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213925892|gb|EEB59449.1| ribosomal protein L3 [Pseudomonas syringae pv. tomato T1]
 gi|330879442|gb|EGH13591.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
 gi|330966911|gb|EGH67171.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 211

 Score =  181 bits (458), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 100/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR+++ +     G   +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEEGE--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209


>gi|328851231|gb|EGG00388.1| hypothetical protein MELLADRAFT_73188 [Melampsora larici-populina
           98AG31]
          Length = 336

 Score =  181 bits (458), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 92/200 (46%), Positives = 127/200 (63%), Gaps = 1/200 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN- 60
           R+GV+ARK GMT  ++ +G R+PVTVL L++ QV+ H+   ++ Y AVQVG      +N 
Sbjct: 65  RTGVIARKRGMTSFWDADGVRVPVTVLELEDVQVIGHKYHARDSYCAVQVGCSNRNTRNN 124

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++   R +F    V+PK ++ EF+V  +  L+PVG+  S ++F  GQ VDV   + GKGF
Sbjct: 125 LNSSQRKWFEHAGVNPKHRVAEFQVTDETSLVPVGTEISSAHFVPGQFVDVKANSKGKGF 184

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR  F G  A+HG +  HR  GSTG  QDPGRV+  KKMAGRMG   +TV+NL V 
Sbjct: 185 AGVMKRWGFSGGNASHGSTKHHRKAGSTGQHQDPGRVWPGKKMAGRMGNQPITVRNLLVA 244

Query: 181 SVDDKRGLILVKGCVPGAKK 200
            +D    ++ VKG VPG  K
Sbjct: 245 RIDTALNVVYVKGQVPGPTK 264


>gi|42520530|ref|NP_966445.1| 50S ribosomal protein L3 [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|42410269|gb|AAS14379.1| ribosomal protein L3 [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 240

 Score =  181 bits (458), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 97/215 (45%), Positives = 144/215 (66%), Gaps = 6/215 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++   +G T +Y+ +  R+ VT+LHL    ++  +  DK GY +V +G G+   KN+
Sbjct: 9   RIGLLMMNIGHTAMYS-DNSRMAVTLLHLSETHIIDIKGQDKCGYNSVILGTGD--FKNI 65

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP   +     ++ K KL+E R+  D   +  G     ++F VGQ +D+TG +IGKGF+
Sbjct: 66  AKPQLEYLKKKGINNKCKLYESRLN-DLSGIECGKKVGINHFVVGQYLDITGYSIGKGFA 124

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF GLRA+HGVSI+HRS GSTG  QDPGRVFK KKMAG +G +R+T +N++++S
Sbjct: 125 GVMKRHNFSGLRASHGVSIAHRSQGSTGQCQDPGRVFKGKKMAGHLGNSRITAQNMKILS 184

Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVN 215
           +D +  +I VKG  VPG  KNS++ VRD+ K +++
Sbjct: 185 IDHENSIIAVKGNNVPGF-KNSYVFVRDAVKKSLH 218


>gi|268609593|ref|ZP_06143320.1| 50S ribosomal protein L3 [Ruminococcus flavefaciens FD-1]
          Length = 210

 Score =  180 bits (457), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 135/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +K+GMT +++  G+ +PVTV+    C VV  +T++ +GY A+Q+G G+ KV+ 
Sbjct: 1   MQKGIIGKKIGMTQIFDEAGKVVPVTVVEAGPCVVVQKKTVENDGYAALQLGYGDVKVQR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KPM+G F   +V+ KK L EFR++ D D L VG +     F VG  +DV G + GKG+
Sbjct: 61  MNKPMKGHFDKADVACKKTLKEFRLE-DCDALNVGDIVKADTFAVGDAIDVVGTSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHN   L+ THG    HR  GS G    P R++K K MAG MG  +VTV+NLE+V
Sbjct: 120 AGPIKRHNQHRLKETHGTGPVHRQAGSMGACSSPSRIYKGKGMAGHMGAEQVTVQNLEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +D +  LI +KG +PG  K   + + DS K+
Sbjct: 180 KIDVENNLIAIKGAIPGP-KGGIVYIVDSVKA 210


>gi|271962632|ref|YP_003336828.1| 50S ribosomal protein L3P [Streptosporangium roseum DSM 43021]
 gi|270505807|gb|ACZ84085.1| LSU ribosomal protein L3P [Streptosporangium roseum DSM 43021]
          Length = 217

 Score =  180 bits (457), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 96/208 (46%), Positives = 132/208 (63%), Gaps = 2/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+ +KLGMT V++ + R +PVTV+    C V   RT +K+GY AVQ+G G+   + V+K
Sbjct: 7   GVLGKKLGMTQVFDADNRMVPVTVVEAGPCVVTRVRTPEKDGYSAVQLGFGQVDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+  +    +++P++   E R +   D   +G   S   F  GQ VDVTG + GKGF+G 
Sbjct: 67  PLGDYLRKHDITPRRYFAEIRTEDAGDYT-LGQELSADTFEAGQFVDVTGKSKGKGFAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GL A+HG    HRS GS G    PGRVFK  +MAGRMG  R TV++L+V +VD
Sbjct: 126 MKRHGFKGLSASHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNVRTTVQSLKVHAVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            ++GLIL+KG +PGA   S +LVR + K
Sbjct: 186 AEKGLILIKGAIPGA-NGSLVLVRTAAK 212


>gi|312135496|ref|YP_004002834.1| 50S ribosomal protein l3 [Caldicellulosiruptor owensensis OL]
 gi|311775547|gb|ADQ05034.1| 50S ribosomal protein L3 [Caldicellulosiruptor owensensis OL]
          Length = 210

 Score =  180 bits (457), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/212 (48%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V++ EGR IPVTV+    C VV  +T++K+GY A+QVG  + K   
Sbjct: 1   MTKGILGKKIGMTQVFDEEGRVIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP++G F+   V PK+ L E R+ KD D   VG       F  G+ VDVTG++  KGF
Sbjct: 61  LNKPLKGHFAKHGVKPKRYLRELRL-KDADKYEVGQEIRVDIFQPGERVDVTGISKAKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       +HG S+ HR  GS G    P R F  KKM GRMGG RVTV NL+VV
Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPG  KNS +++RDS KS
Sbjct: 179 KVDPERNLLLVKGSVPG-NKNSLLIIRDSVKS 209


>gi|71065059|ref|YP_263786.1| 50S ribosomal protein L3 [Psychrobacter arcticus 273-4]
 gi|109893542|sp|Q4FUF6|RL3_PSYA2 RecName: Full=50S ribosomal protein L3
 gi|71038044|gb|AAZ18352.1| LSU ribosomal protein L3P [Psychrobacter arcticus 273-4]
          Length = 212

 Score =  180 bits (457), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 97/214 (45%), Positives = 134/214 (62%), Gaps = 4/214 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V +K GMT V+   G  IPVTV+ +   ++   +  D +GY A+QV  G  +   
Sbjct: 1   MAIGLVGKKCGMTRVFTEAGASIPVTVVEISANRITQVKNTDVDGYQAIQVTTGTRRDSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLL--PVGSVFSPSYFTVGQLVDVTGMTIGK 118
           V+   +G F+   V+  + ++EFR   D DL    +G       F  GQ+VDVTG + GK
Sbjct: 61  VTAAQKGHFAKAGVAAGRGVWEFRA-NDSDLEGREIGGEILADLFEQGQMVDVTGSSKGK 119

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G +KRHNF    ATHG S+SHR+HGSTG  Q PG+VFK KKMAG+MG  RVTV+ LE
Sbjct: 120 GFQGPVKRHNFSMQDATHGNSVSHRAHGSTGQNQSPGKVFKGKKMAGQMGNKRVTVQGLE 179

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V+SVD ++GL+++KG +PGA     ++VR S K+
Sbjct: 180 VISVDAEKGLLVIKGAIPGATGGD-VIVRPSVKA 212


>gi|260772096|ref|ZP_05881013.1| LSU ribosomal protein L3p (L3e) [Vibrio metschnikovii CIP 69.14]
 gi|260612963|gb|EEX38165.1| LSU ribosomal protein L3p (L3e) [Vibrio metschnikovii CIP 69.14]
          Length = 209

 Score =  180 bits (457), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 98/209 (46%), Positives = 135/209 (64%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT V+  EG  IPVTV+ ++  +V   +TL+ +GY A+QV AG  K   V+K
Sbjct: 3   GLVGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGTKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF GA
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELTVELFNEIKKVDVTGTSKGKGFQGA 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 182 AERNLLLIKGAVPGATGAN-VIVKPAIKA 209


>gi|303256450|ref|ZP_07342464.1| 50S ribosomal protein L3 [Burkholderiales bacterium 1_1_47]
 gi|331000644|ref|ZP_08324297.1| 50S ribosomal protein L3 [Parasutterella excrementihominis YIT
           11859]
 gi|302859941|gb|EFL83018.1| 50S ribosomal protein L3 [Burkholderiales bacterium 1_1_47]
 gi|329570856|gb|EGG52567.1| 50S ribosomal protein L3 [Parasutterella excrementihominis YIT
           11859]
          Length = 216

 Score =  180 bits (457), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 98/210 (46%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT ++  +G  IPVTVL + N ++   +T++ +GY AVQV  G  K   VSK
Sbjct: 6   GLVGRKIGMTRIFTEDGVSIPVTVLEVSNNRITQVKTVETDGYNAVQVAFGSKKPSRVSK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G F    V     L EF V++D    + VG   S   F+ GQ VDVTG TIGKGF+G
Sbjct: 66  PLKGQFEKAGVEAGSMLKEFHVEEDKIGEMKVGQTLSIDMFSEGQKVDVTGTTIGKGFAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KRH+F   RA+HG S+S  + GS G RQDPGRVF  K+MAG +G  + T +NL +  V
Sbjct: 126 AIKRHHFSSNRASHGNSVSTNAPGSIGNRQDPGRVFPGKRMAGHLGDVQRTTQNLVIARV 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D  R LILV+G VPG   N  +++R + K+
Sbjct: 186 DADRQLILVRGAVPGC-ANGEVIIRPAVKA 214


>gi|241957878|ref|XP_002421658.1| 60s ribosomal protein, mitochondrial precursor, putative [Candida
           dubliniensis CD36]
 gi|223645003|emb|CAX39595.1| 60s ribosomal protein, mitochondrial precursor, putative [Candida
           dubliniensis CD36]
          Length = 293

 Score =  180 bits (457), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/222 (47%), Positives = 141/222 (63%), Gaps = 10/222 (4%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+ A K GM   +N +G  IP TVL +D+C+V+ ++     GY AV +G  + K+KNV
Sbjct: 67  RPGLFAIKRGMITWFNEKGEHIPATVLEVDSCEVLGYKLFRDFGYTAVIMGTID-KLKNV 125

Query: 62  --SKPMRGFFSSVNVSPKKKLFEFRVQKDDD-----LLPVGSVFSPSYFTVGQLVDVTGM 114
             +  +R  F +  VSPK+K+ EF+++  D+     L+PVG+  +  YFTVGQ VDV G+
Sbjct: 126 KSTNDLR-IFETAKVSPKQKIGEFKIRSIDNDIESKLIPVGTELTADYFTVGQKVDVKGI 184

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           T GKGF+G MKR  F G RATHG S +HR+ G+TG  Q+PGRVF  KKM GRMG    T 
Sbjct: 185 TKGKGFAGVMKRWGFSGGRATHGTSKAHRTPGATGGNQNPGRVFPGKKMPGRMGNRNNTG 244

Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            NLEV+  D + G+++VKG VPG KK S I V D+ K   N 
Sbjct: 245 FNLEVLHTDGEAGILIVKGNVPGPKK-SIIKVYDAIKEYGNS 285


>gi|296137306|ref|YP_003644548.1| 50S ribosomal protein L3 [Thiomonas intermedia K12]
 gi|295797428|gb|ADG32218.1| 50S ribosomal protein L3 [Thiomonas intermedia K12]
          Length = 220

 Score =  180 bits (457), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/212 (47%), Positives = 136/212 (64%), Gaps = 4/212 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT V+  +G  I VTVL     +V   RT D +GY AVQV  G  K   ++K
Sbjct: 7   GLVTRKVGMTRVFTDDGASIAVTVLDASGNRVSQVRTQDVDGYSAVQVAYGSRKPSRLTK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRV--QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
              G  +   V P + L EF +  +K  D   +G+    S F VGQ+VD  G++IGKGF+
Sbjct: 67  GQAGHLAKAGVEPAEILKEFDLPAEKAADYA-LGATVPASLFQVGQMVDAQGVSIGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G++KRHNF   RA+HG S++ R+ GS G  QDPGRVF  K+MAG+MG   VTV+NLEVV 
Sbjct: 126 GSIKRHNFSSNRASHGNSVTTRAPGSIGMAQDPGRVFPGKRMAGQMGNETVTVQNLEVVR 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           +D+ R LILVKG VPG+ ++ ++ +R + KSA
Sbjct: 186 IDEARQLILVKGAVPGS-RSGFVFLRPAVKSA 216


>gi|254468609|ref|ZP_05082015.1| ribosomal protein L3 [beta proteobacterium KB13]
 gi|207087419|gb|EDZ64702.1| ribosomal protein L3 [beta proteobacterium KB13]
          Length = 216

 Score =  180 bits (457), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 96/199 (48%), Positives = 126/199 (63%), Gaps = 1/199 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  +PVTVL +   +V   + +D NGY  +QV  G +K   
Sbjct: 1   MSLGLVGRKVGMTRLFTEDGNSVPVTVLEVVPNKVTQIKKIDDNGYNGLQVSYGNSKSSK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++K ++G  +   V     L EFRV  D+ +   +G     S F  GQ VD+TG TIGKG
Sbjct: 61  LNKSIKGHLAKAGVDSIDGLKEFRVTGDELNNFQLGGELKVSIFEAGQKVDITGTTIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KRH+FG  RATHG SISH + GSTG  QDPGRVFK KKMAG MG    T +NLEV
Sbjct: 121 FQGGIKRHHFGSQRATHGNSISHNAPGSTGMCQDPGRVFKGKKMAGHMGAVTRTTQNLEV 180

Query: 180 VSVDDKRGLILVKGCVPGA 198
           + VD+ R LI++KG VPG+
Sbjct: 181 IRVDENRNLIMIKGAVPGS 199


>gi|309379159|emb|CBX22290.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 214

 Score =  180 bits (457), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 103/212 (48%), Positives = 133/212 (62%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V       EF + ++  + L  G   + S F VGQLVDVTG + GKG
Sbjct: 61  VNKAEAGHFAKAGVEGGSGSIEFALTEEKPVELKAGDEITVSMFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGTTKATVQKLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPGA  NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGA-VNSDVVVRPSVK 211


>gi|225629696|ref|ZP_03787668.1| ribosomal protein L3 [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225630301|ref|YP_002727092.1| ribosomal protein L3 [Wolbachia sp. wRi]
 gi|225591449|gb|EEH12517.1| ribosomal protein L3 [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225592282|gb|ACN95301.1| ribosomal protein L3 [Wolbachia sp. wRi]
          Length = 240

 Score =  180 bits (457), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 97/215 (45%), Positives = 144/215 (66%), Gaps = 6/215 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++   +G T +Y+ +  R+ VT+LHL    ++  +  DK GY +V +G G+   KN+
Sbjct: 9   RIGLLMMNIGHTAMYS-DNSRMAVTLLHLSETYIIDIKGQDKCGYNSVILGTGD--FKNI 65

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP   +     ++ K KL+E R+  D   +  G     ++F VGQ +D+TG +IGKGF+
Sbjct: 66  AKPQLEYLKKKGINNKCKLYESRLN-DLSGIECGKKVGINHFVVGQYLDITGYSIGKGFA 124

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF GLRA+HGVSI+HRS GSTG  QDPGRVFK KKMAG +G +R+T +N++++S
Sbjct: 125 GVMKRHNFSGLRASHGVSIAHRSQGSTGQCQDPGRVFKGKKMAGHLGNSRITAQNMKILS 184

Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVN 215
           +D +  +I VKG  VPG  KNS++ VRD+ K +++
Sbjct: 185 IDHENSIIAVKGNNVPGF-KNSYVFVRDAVKKSLH 218


>gi|294669824|ref|ZP_06734883.1| hypothetical protein NEIELOOT_01717 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308217|gb|EFE49460.1| hypothetical protein NEIELOOT_01717 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 214

 Score =  180 bits (456), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGASVPVTVLEMTPNRVTQLKSEDADGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF V  +    L  G   + + F  GQLVDVTG + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLVEFAVSAEKAAELQAGGEVTVALFEAGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNF   R +HG S SHR  GS G  QDPGRVF  ++MAG+ G  + TV+NLE+
Sbjct: 121 FSGTIKRHNFDSQRTSHGNSRSHRVPGSIGMAQDPGRVFPGQRMAGQYGNTKATVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPGA  NS ++VR S K
Sbjct: 181 VRVDVERHLLLVKGAVPGA-VNSDVIVRPSVK 211


>gi|258625740|ref|ZP_05720619.1| 50S ribosomal protein L3 [Vibrio mimicus VM603]
 gi|258581978|gb|EEW06848.1| 50S ribosomal protein L3 [Vibrio mimicus VM603]
          Length = 209

 Score =  180 bits (456), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 97/209 (46%), Positives = 136/209 (65%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY A+QV AG  K   V+K
Sbjct: 3   GLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR++  ++   VGS  +   F+  + VDVTG + GKGF GA
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFSEVKKVDVTGTSKGKGFQGA 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|239787563|emb|CAX84031.1| 50S ribosomal protein L3 [uncultured bacterium]
          Length = 213

 Score =  180 bits (456), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 98/212 (46%), Positives = 135/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++ RKLGM+ ++  +G+ + VT++ +  C +V  +  + +GY AVQ+G  +AK   
Sbjct: 1   MRAGLIGRKLGMSRIFTADGKSVAVTLVKVGPCPIVGVKRGEPDGYEAVQLGYEDAKPSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V KP RG F+  NV P++ L EFRV       P G     + F VG  VDVTG ++GKGF
Sbjct: 61  VKKPERGVFAKANVPPQRILKEFRVDDASGYQP-GESLGLNLFEVGGRVDVTGRSVGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR  F G RA+HG  ++HRS GS G  Q PGRVFKNKKMAG MG   VT   L V 
Sbjct: 120 AGGMKRWGFRGGRASHGAHLTHRSPGSIGQCQTPGRVFKNKKMAGHMGDVNVTAMGLTVA 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+++KG VPG+ K S + +RD+ K+
Sbjct: 180 MVDLERNLLVLKGSVPGS-KGSVVFIRDAVKA 210


>gi|255943633|ref|XP_002562584.1| Pc20g00200 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211587319|emb|CAP85349.1| Pc20g00200 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 296

 Score =  180 bits (456), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 94/201 (46%), Positives = 129/201 (64%), Gaps = 2/201 (0%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +  K GMT +Y+ E G+RIP TVL LD  +V+ H+T +++GY AVQVGAG     
Sbjct: 68  LRTGAIGIKKGMTAIYDPESGKRIPCTVLQLDRVEVISHKTRERHGYYAVQVGAGWKHPS 127

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV+K M G FS   +SPK+ +FEFRV+ +  L+PVG      +F  GQ VD    T GKG
Sbjct: 128 NVTKSMLGHFSVNGISPKRHIFEFRVKDEAGLIPVGQSIEAGWFQEGQFVDARSNTKGKG 187

Query: 120 FSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKRH FGG   +HGVS++HR    S   +    RV+  KKMAG MG  + TV+NL+
Sbjct: 188 FAGVMKRHGFGGQDRSHGVSLTHRSMGSSGPGQGGGSRVYPGKKMAGNMGNTQNTVQNLK 247

Query: 179 VVSVDDKRGLILVKGCVPGAK 199
           ++ VD + G+++V G V G K
Sbjct: 248 ILKVDSENGIVVVSGAVSGPK 268


>gi|313206395|ref|YP_004045572.1| LSU ribosomal protein l3p [Riemerella anatipestifer DSM 15868]
 gi|312445711|gb|ADQ82066.1| LSU ribosomal protein L3P [Riemerella anatipestifer DSM 15868]
 gi|315023664|gb|EFT36668.1| LSU ribosomal protein L3p (L3e) [Riemerella anatipestifer RA-YM]
 gi|325336160|gb|ADZ12434.1| Ribosomal protein L3 [Riemerella anatipestifer RA-GD]
          Length = 207

 Score =  180 bits (456), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 95/206 (46%), Positives = 136/206 (66%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C V+  RT++K+GY+  Q+G  +   KNV 
Sbjct: 2   SGIIGKKIGMTSLFDESGKNIPCTVIQAGPCSVLQVRTVEKDGYVGYQLGFDDKSEKNVG 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K + G F     +PK KL EF    D+  L VG   +   F+ G+ VDVTG + GKGF G
Sbjct: 62  KALAGHFKKAGSTPKAKLHEFHHGFDN--LQVGDEVTVKLFSEGEYVDVTGTSKGKGFQG 119

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG ++ATHG     R+ GS G   DP RVFK  +MAGRMGG +VTV+NL+V+ 
Sbjct: 120 VVKRHGFGGVMQATHGQHNRLRAPGSIGAGSDPSRVFKGLRMAGRMGGKQVTVQNLQVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           VD+++ L++VKG VPGA KNS++++R
Sbjct: 180 VDEEQNLLVVKGAVPGA-KNSYVIIR 204


>gi|293602635|ref|ZP_06685078.1| 50S ribosomal protein L3 [Achromobacter piechaudii ATCC 43553]
 gi|292819007|gb|EFF78045.1| 50S ribosomal protein L3 [Achromobacter piechaudii ATCC 43553]
          Length = 233

 Score =  179 bits (455), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 100/213 (46%), Positives = 133/213 (62%), Gaps = 3/213 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+V RK+GMT ++  EG  IPVTVL + N +V   ++L+ +GY A+QV  G  +   V
Sbjct: 16  RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQVKSLETDGYAAIQVAYGTRRASRV 75

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFS-PSYFTVGQLVDVTGMTIGKG 119
           ++P  G ++         L EFR+          GSV +  S F  GQ VDVTG TIGKG
Sbjct: 76  AQPQTGHYAKAGTEAGSILKEFRLDPARAAEFAAGSVIAVESVFEAGQQVDVTGTTIGKG 135

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRH+FG  RA+HG S SHR  GS G  QDPGR+F  K+MAG +G    TV+NL+V
Sbjct: 136 FAGTIKRHHFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMAGHLGDVTRTVQNLDV 195

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +RGL+LVKG VPG    + I+VR + K+
Sbjct: 196 VRVDVERGLLLVKGAVPG-HAGADIVVRPAIKA 227


>gi|329118598|ref|ZP_08247302.1| 50S ribosomal protein L3 [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465333|gb|EGF11614.1| 50S ribosomal protein L3 [Neisseria bacilliformis ATCC BAA-1200]
          Length = 214

 Score =  179 bits (455), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K K+
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLEITPNRVTQLKSEDTDGYTAVQVTFGQKKAKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             K   G F+   V   + L EF +  +    L VG   S S F VGQLVD+TG + GKG
Sbjct: 61  TGKAEAGHFAKAGVEAGRGLVEFALSAEKLSELQVGGEISVSLFEVGQLVDITGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNF   R +HG S SHR  GS G  QDPGRVF  ++MAG+ G  + T +NL+V
Sbjct: 121 FSGTIKRHNFDSQRTSHGNSRSHRVPGSIGMAQDPGRVFPGQRMAGQYGNTKSTAQNLQV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPGA  NS ++VR   K
Sbjct: 181 VRVDAERNLLLVKGAVPGA-VNSDVIVRPGVK 211


>gi|167587772|ref|ZP_02380160.1| ribosomal protein L3 [Burkholderia ubonensis Bu]
 gi|325529678|gb|EGD06541.1| 50S ribosomal protein L3 [Burkholderia sp. TJI49]
          Length = 216

 Score =  179 bits (455), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 94/200 (47%), Positives = 127/200 (63%), Gaps = 1/200 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR+       L  G++  P  F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NFG  RA+HG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAK 199
             +D +R L+LVKG +PGAK
Sbjct: 181 ARIDAERKLLLVKGAIPGAK 200


>gi|88607449|ref|YP_504892.1| 50S ribosomal protein L3 [Anaplasma phagocytophilum HZ]
 gi|88598512|gb|ABD43982.1| ribosomal protein L3 [Anaplasma phagocytophilum HZ]
          Length = 220

 Score =  179 bits (455), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/209 (50%), Positives = 140/209 (66%), Gaps = 6/209 (2%)

Query: 8   RKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
           +K+G T +++   G R+PVT+L L++  VV  +    +GY AV +G     V  V+KP  
Sbjct: 4   KKVGSTAMFDATTGSRVPVTLLLLEDTFVVGTKVSGIHGYDAVVLGTKRRGV--VNKPQV 61

Query: 67  GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKR 126
                + +    KLFE RV+   DL P GS    S+F  GQ VDVTG TIG+GF+G MKR
Sbjct: 62  QALRKLGIEEDYKLFESRVKAVGDLQP-GSKVEVSHFFKGQFVDVTGYTIGRGFAGVMKR 120

Query: 127 HNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKR 186
           HNF GLRA+HGVSISHRS GSTG  QDPGRVFK KKMAG MG ++VT++NL+V+ VD+K 
Sbjct: 121 HNFRGLRASHGVSISHRSQGSTGQCQDPGRVFKGKKMAGHMGDSKVTMQNLQVMLVDEKE 180

Query: 187 GLILVKGC-VPGAKKNSWILVRDSFKSAV 214
            L++V+G  +PGA + S++ VRD+ K  V
Sbjct: 181 SLLVVRGTGIPGA-EGSYVFVRDAIKKPV 208


>gi|312795774|ref|YP_004028696.1| LSU ribosomal protein L3P [Burkholderia rhizoxinica HKI 454]
 gi|312167549|emb|CBW74552.1| LSU ribosomal protein L3P [Burkholderia rhizoxinica HKI 454]
          Length = 247

 Score =  179 bits (455), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 96/201 (47%), Positives = 129/201 (64%), Gaps = 3/201 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTVL + + +V   +T++ +GY AVQV  GE +   
Sbjct: 30  MSLGLVGRKVGMTRIFTADGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGERRASR 89

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           V+KP+ G  +   V   + L EFR++ D   +L P GSV     F VGQ VDV G++IGK
Sbjct: 90  VTKPLAGHLAKAGVQAGEILKEFRIEADKAAELSP-GSVVGVDLFEVGQKVDVQGVSIGK 148

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           G++G +KR+NFG  RA+HG S SH   GS G  QDPGRVF  K+M G +G    T +NLE
Sbjct: 149 GYAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTATTQNLE 208

Query: 179 VVSVDDKRGLILVKGCVPGAK 199
           +  +D +R LILVKG VPGAK
Sbjct: 209 IARIDAQRKLILVKGAVPGAK 229


>gi|169794594|ref|YP_001712387.1| 50S ribosomal protein L3 [Acinetobacter baumannii AYE]
 gi|213158835|ref|YP_002320833.1| ribosomal protein L3 [Acinetobacter baumannii AB0057]
 gi|215482183|ref|YP_002324365.1| Ribosomal protein L3 family protein [Acinetobacter baumannii
           AB307-0294]
 gi|239503234|ref|ZP_04662544.1| 50S ribosomal protein L3 [Acinetobacter baumannii AB900]
 gi|294839747|ref|ZP_06784430.1| 50S ribosomal protein L3 [Acinetobacter sp. 6013113]
 gi|294842653|ref|ZP_06787336.1| 50S ribosomal protein L3 [Acinetobacter sp. 6014059]
 gi|294860425|ref|ZP_06798194.1| 50S ribosomal protein L3 [Acinetobacter sp. 6013150]
 gi|301345010|ref|ZP_07225751.1| 50S ribosomal protein L3 [Acinetobacter baumannii AB056]
 gi|301512059|ref|ZP_07237296.1| 50S ribosomal protein L3 [Acinetobacter baumannii AB058]
 gi|301596104|ref|ZP_07241112.1| 50S ribosomal protein L3 [Acinetobacter baumannii AB059]
 gi|226725115|sp|B7GW02|RL3_ACIB3 RecName: Full=50S ribosomal protein L3
 gi|226725116|sp|B7IA39|RL3_ACIB5 RecName: Full=50S ribosomal protein L3
 gi|226725118|sp|B0V6W8|RL3_ACIBY RecName: Full=50S ribosomal protein L3
 gi|226725207|sp|A3M983|RL3_ACIBT RecName: Full=50S ribosomal protein L3
 gi|169147521|emb|CAM85382.1| 50S ribosomal protein L3 [Acinetobacter baumannii AYE]
 gi|193078477|gb|ABO13477.2| 50S ribosomal protein L3 [Acinetobacter baumannii ATCC 17978]
 gi|213057995|gb|ACJ42897.1| ribosomal protein L3 [Acinetobacter baumannii AB0057]
 gi|213985898|gb|ACJ56197.1| Ribosomal protein L3 family protein [Acinetobacter baumannii
           AB307-0294]
 gi|322509508|gb|ADX04962.1| 50S ribosomal protein L3 [Acinetobacter baumannii 1656-2]
 gi|323519528|gb|ADX93909.1| 50S ribosomal protein L3 [Acinetobacter baumannii TCDC-AB0715]
          Length = 212

 Score =  179 bits (455), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 98/213 (46%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+ +D  ++   +TL+ +GY AVQV  GE +   
Sbjct: 1   MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFRV + + +   VG       FTVGQ+VDVTG + GKG
Sbjct: 61  VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVTV+ LE+
Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VSVD +R +++VKG +PGA     ++VR + K+
Sbjct: 181 VSVDTERSVLVVKGAIPGATGGD-VIVRPTIKA 212


>gi|126643095|ref|YP_001086079.1| 50S ribosomal protein L3 [Acinetobacter baumannii ATCC 17978]
 gi|184159598|ref|YP_001847937.1| 50S ribosomal protein L3 [Acinetobacter baumannii ACICU]
 gi|260557027|ref|ZP_05829244.1| 50S ribosomal protein L3 [Acinetobacter baumannii ATCC 19606]
 gi|212288243|sp|B2HZM2|RL3_ACIBC RecName: Full=50S ribosomal protein L3
 gi|183211192|gb|ACC58590.1| 50S ribosomal protein L3 [Acinetobacter baumannii ACICU]
 gi|260409633|gb|EEX02934.1| 50S ribosomal protein L3 [Acinetobacter baumannii ATCC 19606]
          Length = 214

 Score =  179 bits (455), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 98/213 (46%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+ +D  ++   +TL+ +GY AVQV  GE +   
Sbjct: 3   MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 62

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFRV + + +   VG       FTVGQ+VDVTG + GKG
Sbjct: 63  VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVTV+ LE+
Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VSVD +R +++VKG +PGA     ++VR + K+
Sbjct: 183 VSVDTERSVLVVKGAIPGATGGD-VIVRPTIKA 214


>gi|254427943|ref|ZP_05041650.1| ribosomal protein L3 [Alcanivorax sp. DG881]
 gi|196194112|gb|EDX89071.1| ribosomal protein L3 [Alcanivorax sp. DG881]
          Length = 211

 Score =  179 bits (455), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 98/212 (46%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GV+ RK GMT V+  EG  +PVTV+ +   +V   +T + +GY AVQV  GE +   
Sbjct: 1   MAIGVIGRKCGMTRVFTEEGVSVPVTVIEVSPNRVSQVKTEESDGYQAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+   V   + ++EFR +  +     GS  +   F  GQ++DVTG + GKGF
Sbjct: 61  VTKAQAGHFAKAGVEAGRGVWEFRAEAGE--FEAGSAVTVEGFEAGQMIDVTGSSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF    ATHG S+SHR+ GS G  Q PGRVFK KKMAG +G  RVTV+NLEVV
Sbjct: 119 AGGVKRWNFSTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHLGAERVTVQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  + L+LVKG VPGA     ++VR + K+
Sbjct: 179 RVDADKNLLLVKGAVPGATGGD-VIVRLAVKA 209


>gi|169632350|ref|YP_001706086.1| 50S ribosomal protein L3 [Acinetobacter baumannii SDF]
 gi|226725117|sp|B0VQR8|RL3_ACIBS RecName: Full=50S ribosomal protein L3
 gi|169151142|emb|CAO99814.1| 50S ribosomal protein L3 [Acinetobacter baumannii]
          Length = 212

 Score =  179 bits (454), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 98/213 (46%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+ +D  ++   +TL+ +GY AVQV  GE +   
Sbjct: 1   MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFRV + + +   VG       FTVGQ+VDVTG + GKG
Sbjct: 61  VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVTV+ LE+
Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VSVD +R +++VKG +PGA     ++VR + K+
Sbjct: 181 VSVDTERSVLVVKGAIPGATGGD-VIVRPAIKA 212


>gi|261211151|ref|ZP_05925440.1| LSU ribosomal protein L3p (L3e) [Vibrio sp. RC341]
 gi|262166617|ref|ZP_06034354.1| LSU ribosomal protein L3p (L3e) [Vibrio mimicus VM223]
 gi|262170467|ref|ZP_06038145.1| LSU ribosomal protein L3p (L3e) [Vibrio mimicus MB-451]
 gi|262401883|ref|ZP_06078448.1| LSU ribosomal protein L3p (L3e) [Vibrio sp. RC586]
 gi|260839652|gb|EEX66263.1| LSU ribosomal protein L3p (L3e) [Vibrio sp. RC341]
 gi|261891543|gb|EEY37529.1| LSU ribosomal protein L3p (L3e) [Vibrio mimicus MB-451]
 gi|262026333|gb|EEY45001.1| LSU ribosomal protein L3p (L3e) [Vibrio mimicus VM223]
 gi|262351855|gb|EEZ00986.1| LSU ribosomal protein L3p (L3e) [Vibrio sp. RC586]
          Length = 209

 Score =  179 bits (454), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 97/209 (46%), Positives = 135/209 (64%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY A+QV AG  K   V+K
Sbjct: 3   GLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR++  ++   VGS  +   F   + VDVTG + GKGF GA
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQGA 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|297567284|ref|YP_003686256.1| 50S ribosomal protein L3 [Meiothermus silvanus DSM 9946]
 gi|296851733|gb|ADH64748.1| 50S ribosomal protein L3 [Meiothermus silvanus DSM 9946]
          Length = 212

 Score =  179 bits (454), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/215 (46%), Positives = 131/215 (60%), Gaps = 7/215 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  K+GMT V+  + R +PVTV+    C VV  RT DK+GY AVQ+G    K + V+K
Sbjct: 3   GILGTKIGMTQVWKND-RAVPVTVILAGPCPVVQRRTPDKDGYEAVQLGFRPQKAQRVNK 61

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+   V P + L E R        P G   +   F  G+ VDVTG + G+GF G 
Sbjct: 62  PLKGHFAKAGVEPVRYLKEIR-----GFSPEGDTVTVEIFAAGEKVDVTGTSKGRGFQGV 116

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR NF G  ATHG    HR  GS G R+ PGRV+K KKMAGRMGG RVTV+NLEVV V 
Sbjct: 117 MKRWNFAGGNATHGAHKVHRHPGSIGNRKTPGRVYKGKKMAGRMGGERVTVQNLEVVDVV 176

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
            +  LILVKG VPGA   + ++VR++ ++     G
Sbjct: 177 PEENLILVKGAVPGA-NGTLVVVRETVRTPAKQGG 210


>gi|223041817|ref|ZP_03612007.1| 50S ribosomal protein L3 [Actinobacillus minor 202]
 gi|240947884|ref|ZP_04752324.1| 50S ribosomal protein L3 [Actinobacillus minor NM305]
 gi|223017386|gb|EEF15807.1| 50S ribosomal protein L3 [Actinobacillus minor 202]
 gi|240297846|gb|EER48282.1| 50S ribosomal protein L3 [Actinobacillus minor NM305]
          Length = 210

 Score =  179 bits (454), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 98/209 (46%), Positives = 132/209 (63%), Gaps = 1/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   V+K
Sbjct: 3   GLIGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDGYSAIQVTTGTKKASRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V   + L+EFR + +     +G   +   FT  + VDVTG + GKGF G 
Sbjct: 63  PEAGHFVKAGVEAGRGLWEFRTEGETQEFTLGQEINVDIFTDVKKVDVTGTSKGKGFQGG 122

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV VD
Sbjct: 123 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 182

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+LVKG VPGA  NS ++V+ + K+
Sbjct: 183 AERKLLLVKGAVPGA-TNSDVIVKPAVKA 210


>gi|312793939|ref|YP_004026862.1| 50S ribosomal protein l3 [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312877365|ref|ZP_07737330.1| 50S ribosomal protein L3 [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795839|gb|EFR12203.1| 50S ribosomal protein L3 [Caldicellulosiruptor lactoaceticus 6A]
 gi|312181079|gb|ADQ41249.1| 50S ribosomal protein L3 [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 210

 Score =  179 bits (454), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/212 (48%), Positives = 133/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V++  GR IPVTV+    C VV  +T++K+GY A+QVG  + K   
Sbjct: 1   MTKGILGKKIGMTQVFDEAGRAIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+RG F+   V PK+ L E R+ KD D   VG       F  G+ VDVTG++  KGF
Sbjct: 61  LNKPLRGHFAKHGVKPKRFLRELRL-KDADKYEVGQEIRVDIFQPGERVDVTGISKAKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       +HG S+ HR  GS G    P R F  KKM GRMGG RVTV NL+VV
Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPG  KNS +++RDS KS
Sbjct: 179 KVDPERNLLLVKGSVPG-NKNSLLIIRDSVKS 209


>gi|295677932|ref|YP_003606456.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1002]
 gi|295437775|gb|ADG16945.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1002]
          Length = 219

 Score =  179 bits (454), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 94/200 (47%), Positives = 126/200 (63%), Gaps = 1/200 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EF++       L  G+V  P  F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVQAGEILKEFQIDAAKAAELSSGTVVGPELFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RA+HG S SH   GS G  QDPGRVF  K+M G MG  +VTV+NLE+
Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDEKVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAK 199
             +D  R L+LVKG VPGAK
Sbjct: 181 ARIDADRKLLLVKGAVPGAK 200


>gi|238879545|gb|EEQ43183.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 293

 Score =  179 bits (454), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/222 (46%), Positives = 141/222 (63%), Gaps = 10/222 (4%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+ A K GM   +N +G  IP TVL +D+C+V+ ++     GY AV +G  + K+KNV
Sbjct: 66  RPGLFAIKRGMITWFNEKGEHIPATVLEVDSCEVLGYKLFKDFGYTAVIMGTID-KLKNV 124

Query: 62  --SKPMRGFFSSVNVSPKKKLFEFRVQKDDD-----LLPVGSVFSPSYFTVGQLVDVTGM 114
             +  +R  F +  VSPK+K+ EF+++  D+     L+PVG+  +  YF+VGQ VDV G+
Sbjct: 125 KSTNDLR-IFETAKVSPKQKIGEFKIRSIDNDIESKLIPVGTELTADYFSVGQKVDVKGV 183

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           T GKGF+G MKR  F G RATHG S +HR+ G+TG  Q+PGRVF  KKM GRMG    T 
Sbjct: 184 TKGKGFAGVMKRWGFSGGRATHGTSKAHRTPGATGGNQNPGRVFPGKKMPGRMGHQNNTG 243

Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            NLEV+  D + G+++VKG VPG KK S I V D+ K   N 
Sbjct: 244 FNLEVLHTDGEAGILIVKGNVPGPKK-SIIKVSDAIKEYGNS 284


>gi|330940885|gb|EGH43842.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 211

 Score =  179 bits (454), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 100/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  I VTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIAVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR+++ D     G   +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209


>gi|330815249|ref|YP_004358954.1| 50S ribosomal protein L3 [Burkholderia gladioli BSR3]
 gi|327367642|gb|AEA58998.1| 50S ribosomal protein L3 [Burkholderia gladioli BSR3]
          Length = 216

 Score =  179 bits (454), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 94/200 (47%), Positives = 126/200 (63%), Gaps = 1/200 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR+       L  G++  P  F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEVLKEFRIDAAKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RATHG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 121 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAK 199
             +D +R L+LVKG +PGAK
Sbjct: 181 ARIDAERKLLLVKGAIPGAK 200


>gi|304310016|ref|YP_003809614.1| 50S ribosomal protein L3 [gamma proteobacterium HdN1]
 gi|301795749|emb|CBL43948.1| 50S ribosomal protein L3 [gamma proteobacterium HdN1]
          Length = 212

 Score =  179 bits (454), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 100/212 (47%), Positives = 136/212 (64%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V +K GMT ++N +G    VTV+ +D  +V + +++D++GY AVQV  G  K   
Sbjct: 1   MAIGLVGKKCGMTRIFNEDGSSTSVTVIEVDPNRVTLIKSVDRDGYSAVQVTTGVRKAST 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G FS   V     L+EFR   D  + L VG     S F  GQ VDVTG++ GKG
Sbjct: 61  VNKAEAGLFSKAGVEAGSGLWEFRFPDDAAITLSVGDSVGVSIFEAGQAVDVTGVSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KR NF    ATHG S+SHR+ GS G RQ PGRVFK KKM+G +G  +VTV++L++
Sbjct: 121 FAGVVKRWNFRTQDATHGNSLSHRAPGSIGQRQTPGRVFKGKKMSGHLGDAQVTVQSLQL 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPGA  N+ ++VR + K
Sbjct: 181 VRVDVERNLLLVKGAVPGAAGNN-VIVRPALK 211


>gi|68474538|ref|XP_718642.1| likely mitochondrial ribosomal protein (E. coli L3) [Candida
           albicans SC5314]
 gi|46440421|gb|EAK99727.1| likely mitochondrial ribosomal protein (E. coli L3) [Candida
           albicans SC5314]
          Length = 293

 Score =  179 bits (454), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 104/222 (46%), Positives = 141/222 (63%), Gaps = 10/222 (4%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+ A K GM   +N +G  IP TVL +D+C+V+ ++     GY AV +G  + K+KNV
Sbjct: 66  RPGLFAIKRGMITWFNEKGEHIPATVLEVDSCEVLGYKLFKDFGYTAVIMGTID-KLKNV 124

Query: 62  --SKPMRGFFSSVNVSPKKKLFEFRVQKDDD-----LLPVGSVFSPSYFTVGQLVDVTGM 114
             +  +R  F +  VSPK+K+ EF+++  D+     L+PVG+  +  YF+VGQ VDV G+
Sbjct: 125 KSTNDLR-IFETAKVSPKQKIGEFKIRSIDNDIESKLIPVGTELTADYFSVGQKVDVKGV 183

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           T GKGF+G MKR  F G RATHG S +HR+ G+TG  Q+PGRVF  KKM GRMG    T 
Sbjct: 184 TKGKGFAGVMKRWGFSGGRATHGTSKAHRTPGATGGNQNPGRVFPGKKMPGRMGHQNNTG 243

Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            NLEV+  D + G+++VKG VPG KK S I V D+ K   N 
Sbjct: 244 FNLEVLHTDGEAGILIVKGNVPGPKK-SIIKVSDAIKEYGNS 284


>gi|94500993|ref|ZP_01307518.1| 50S ribosomal protein L3 [Oceanobacter sp. RED65]
 gi|94426933|gb|EAT11916.1| 50S ribosomal protein L3 [Oceanobacter sp. RED65]
          Length = 212

 Score =  179 bits (453), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/218 (46%), Positives = 130/218 (59%), Gaps = 6/218 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V +K GMT V+  +G  +PVTV+ +   +V   +T + +GY AVQV AG  K   
Sbjct: 1   MALGLVGKKAGMTRVFTEDGASVPVTVIEVTPNRVTQVKTTETDGYNAVQVTAGSRKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK   G F+  NV     L EFR+++  D   +G   +   F  GQ+VDVTG + GKGF
Sbjct: 61  VSKAEAGHFAKANVEAGDSLLEFRIEEVADF-NIGDELTVERFEAGQVVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF    ATHG S+SHR+ GS G  Q PGRV+K KKMAG MG  RVT +NLE+V
Sbjct: 120 QGGVKRWNFSTQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGHMGAARVTTQNLEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
            VD +  LILVKG +PGA     I+     K AV  +G
Sbjct: 180 RVDAESNLILVKGALPGATGGQLII-----KPAVKARG 212


>gi|319787925|ref|YP_004147400.1| 50S ribosomal protein L3 [Pseudoxanthomonas suwonensis 11-1]
 gi|317466437|gb|ADV28169.1| 50S ribosomal protein L3 [Pseudoxanthomonas suwonensis 11-1]
          Length = 216

 Score =  179 bits (453), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 98/211 (46%), Positives = 133/211 (63%), Gaps = 4/211 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK GM+ V+  +GR IPVT++     ++   +T++ +GY AVQV  G  +   V+K
Sbjct: 8   GLVGRKAGMSRVFTEDGRSIPVTLIEATPNRITQIKTVEADGYSAVQVTTGARRASLVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           P+ G ++   V   + L+EFRV  D+ +    VG       F VGQ+VDV G+T GKGF 
Sbjct: 68  PLAGHYAKAKVEAGRGLWEFRV-ADEKIGDFAVGGEIKADIFEVGQIVDVQGVTKGKGFQ 126

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNF    ATHG S+SHR+ GS G RQ PGRVF  KKMAG MG  + + +NLEVV 
Sbjct: 127 GTIKRHNFTMGDATHGNSLSHRAPGSIGQRQTPGRVFPGKKMAGHMGAEQQSTQNLEVVR 186

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VD +RGLI V+G VPGA     ++VR + K+
Sbjct: 187 VDAERGLIAVRGAVPGAPGGD-VIVRPASKA 216


>gi|331018160|gb|EGH98216.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 211

 Score =  179 bits (453), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 99/212 (46%), Positives = 132/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR+++ +     G   +   F  GQLVDV G + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEEGE--YQAGDQINAEIFAAGQLVDVAGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209


>gi|302908346|ref|XP_003049847.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256730783|gb|EEU44134.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 333

 Score =  179 bits (453), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 95/200 (47%), Positives = 130/200 (65%), Gaps = 2/200 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+GV+A K GMT V+ +   R+P TVL LD  QV+ ++T +KNGY AVQ+G+G    +N
Sbjct: 76  LRTGVLAIKKGMTSVF-VGKVRVPCTVLQLDQVQVIANKTREKNGYWAVQIGSGSRDGRN 134

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+ PM G++ +  ++PK  L EF V+    LLPVG    P +F  GQ VDV   + G GF
Sbjct: 135 VTSPMLGYYEAKGIAPKADLAEFMVRDQSGLLPVGVQILPDWFKKGQYVDVKSRSRGMGF 194

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179
           +G MKRH F G  A+HG S +HR+ G+TG  Q  G RV   KKM GRMG   VTV+NL+V
Sbjct: 195 AGGMKRHGFSGQEASHGNSKNHRTIGTTGPSQGGGSRVLPGKKMPGRMGNEFVTVQNLKV 254

Query: 180 VSVDDKRGLILVKGCVPGAK 199
           + VD++ G++LV G + G K
Sbjct: 255 MMVDNELGVVLVSGPIAGPK 274


>gi|225024790|ref|ZP_03713982.1| hypothetical protein EIKCOROL_01677 [Eikenella corrodens ATCC
           23834]
 gi|224942497|gb|EEG23706.1| hypothetical protein EIKCOROL_01677 [Eikenella corrodens ATCC
           23834]
          Length = 214

 Score =  179 bits (453), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 131/212 (61%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V+  +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFTEQGVSVPVTVLEMSPNRVTQVKSKDTDGYAAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++    L VG   + + F  GQ VDVTG + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLHEFALTEEKLAELKVGDEVTVAIFEAGQFVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRHNFG  RA+HG S SHR  GS G  QDPGRVF  K+MAG+ G    TV+ LEV
Sbjct: 121 FAGTIKRHNFGAQRASHGNSRSHRVPGSIGMNQDPGRVFPGKRMAGQYGNTTATVQRLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPGA  N  ++VR S K
Sbjct: 181 VRVDAERNLLLVKGAVPGA-ANGDVVVRPSVK 211


>gi|53803548|ref|YP_114788.1| 50S ribosomal protein L3 [Methylococcus capsulatus str. Bath]
 gi|81823603|sp|Q605B2|RL3_METCA RecName: Full=50S ribosomal protein L3
 gi|53757309|gb|AAU91600.1| ribosomal protein L3 [Methylococcus capsulatus str. Bath]
          Length = 211

 Score =  179 bits (453), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 95/211 (45%), Positives = 130/211 (61%), Gaps = 1/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+H++  +VV  +TL+ +GY A+QV  G  K   
Sbjct: 1   MAIGLVGRKCGMTHIFTDAGAAVPVTVIHVEPNRVVQVKTLESDGYRAIQVTTGSKKRSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++K   G +S   V   + L+EFR++  D    VG+      F  GQ VD    +IGKGF
Sbjct: 61  LTKADAGHYSKAGVEAGRGLWEFRLEDSDQDYTVGTELGVGVFAEGQFVDARARSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNF    ATHG S+SHR+ GS G  Q PGRVFK K+MAG MG   +TV NL +V
Sbjct: 121 AGVVKRHNFRTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKRMAGHMGDKNITVPNLRIV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +D +R L+LVKG VPG  K + ++VR + K
Sbjct: 181 GIDAERSLLLVKGAVPGT-KGADVIVRPAAK 210


>gi|239943577|ref|ZP_04695514.1| 50S ribosomal protein L3 [Streptomyces roseosporus NRRL 15998]
 gi|239990030|ref|ZP_04710694.1| 50S ribosomal protein L3 [Streptomyces roseosporus NRRL 11379]
 gi|291447044|ref|ZP_06586434.1| 50S ribosomal protein L3 [Streptomyces roseosporus NRRL 15998]
 gi|291349991|gb|EFE76895.1| 50S ribosomal protein L3 [Streptomyces roseosporus NRRL 15998]
          Length = 214

 Score =  179 bits (453), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 98/210 (46%), Positives = 129/210 (61%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+  KLGMT V++   R +PVTV+    C V   RT D +GY AVQ+  GE   + V+K
Sbjct: 7   GVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+  +V+P++ L E R   D     +G   + + F  G  VDVTG + GKGF+G 
Sbjct: 67  PLKGHFAKADVTPRRHLVELRT-PDASEYTLGQEVTAAVFESGVKVDVTGKSKGKGFAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL + +VD
Sbjct: 126 MKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++GL+L+KG VPG      +LVR + K A
Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214


>gi|219871730|ref|YP_002476105.1| 50S ribosomal protein L3 [Haemophilus parasuis SH0165]
 gi|254803675|sp|B8F755|RL3_HAEPS RecName: Full=50S ribosomal protein L3
 gi|219691934|gb|ACL33157.1| 50S ribosomal protein L3 [Haemophilus parasuis SH0165]
          Length = 208

 Score =  179 bits (453), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 100/209 (47%), Positives = 134/209 (64%), Gaps = 3/209 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT ++N +G  IPVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+K
Sbjct: 3   GLVGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKASRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V   + L+EFR + ++    +G   +   FT  + VDVTG + GKGF G 
Sbjct: 63  PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFTDVKKVDVTGTSKGKGFQGG 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV VD
Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 180

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+LVKG VPGA  NS ++V+ + K+
Sbjct: 181 AERKLLLVKGSVPGA-TNSDVIVKPAVKA 208


>gi|163859273|ref|YP_001633571.1| 50S ribosomal protein L3 [Bordetella petrii DSM 12804]
 gi|212288248|sp|A9IJ01|RL3_BORPD RecName: Full=50S ribosomal protein L3
 gi|163263001|emb|CAP45304.1| 50S ribosomal protein L3 [Bordetella petrii]
          Length = 233

 Score =  179 bits (453), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 97/213 (45%), Positives = 132/213 (61%), Gaps = 3/213 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+V RK+GMT ++  EG  IPVTVL + N +V   ++L+ +GY AVQV  G  +   V
Sbjct: 16  RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQIKSLEADGYAAVQVAYGTRRASRV 75

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQ--KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++P  G ++         L EFR+   +  +  P   +   S F  GQ VDVTG TIGKG
Sbjct: 76  AQPQTGHYAKAGTEAGSILKEFRLDPARLAEFTPGAVIAVESVFEAGQQVDVTGTTIGKG 135

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRH+FG  RA+HG S SHR  GS G  QDPGR+F  K+M+G +G    TV+NL+V
Sbjct: 136 FAGTIKRHHFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMSGHLGDVTRTVQNLDV 195

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +RGL+LVKG VPG      ++VR + K+
Sbjct: 196 VRVDAERGLLLVKGAVPG-HAGGDVVVRPAIKA 227


>gi|167626039|ref|YP_001676333.1| 50S ribosomal protein L3 [Shewanella halifaxensis HAW-EB4]
 gi|189029480|sp|B0TM12|RL3_SHEHH RecName: Full=50S ribosomal protein L3
 gi|167356061|gb|ABZ78674.1| ribosomal protein L3 [Shewanella halifaxensis HAW-EB4]
          Length = 212

 Score =  179 bits (453), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 94/206 (45%), Positives = 128/206 (62%), Gaps = 1/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++N +G  +PVTV+ +   +V   RTLD +GY A+QV  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFNEDGASVPVTVIEIAANRVTQVRTLDTDGYRALQVTTGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++KP  G F+   V   + L+E R+   + + + VG+  +   F     VDVTG + GKG
Sbjct: 61  ITKPEAGHFAKAGVEAGRGLWEMRLADGEGEGIEVGAELNVDIFADIAKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S++HRS+GS G  Q PGRVFK KKM+G MG  RVT +NLEV
Sbjct: 121 FQGGIKRWNFAMQDATHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205
           + VD +R L+LVKG VPGA     I+
Sbjct: 181 IRVDAERNLLLVKGAVPGATNGDLII 206


>gi|295111422|emb|CBL28172.1| LSU ribosomal protein L3P [Synergistetes bacterium SGP1]
          Length = 207

 Score =  179 bits (453), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 93/207 (44%), Positives = 132/207 (63%), Gaps = 1/207 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT +++ EG+ + VTV+    C VV  RT ++NGY AV +G G  K   
Sbjct: 1   MGIGILGKKMGMTQIFDAEGQAVAVTVIAAGPCPVVAVRTPEQNGYSAVLLGFGAVKPHK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SKP++G F    V PK+ L EFR+ K +    VG       F  G+ +DV+G++ GKGF
Sbjct: 61  LSKPVKGLFDKNKVEPKRTLREFRLDKAEGY-EVGQEIRVDLFEAGERIDVSGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR++FGG + +HG S+ HR  GS+G    PGRVF  K+M G MG ++VTVKNL V+
Sbjct: 120 AGVMKRYHFGGQQFSHGTSVEHRHGGSSGAISYPGRVFPGKRMPGHMGSDKVTVKNLTVM 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207
           +VD +  L+LVKG VPGAK     L +
Sbjct: 180 AVDLENNLLLVKGAVPGAKDGLVALYK 206


>gi|260549840|ref|ZP_05824056.1| 50S ribosomal protein L3 [Acinetobacter sp. RUH2624]
 gi|260407090|gb|EEX00567.1| 50S ribosomal protein L3 [Acinetobacter sp. RUH2624]
          Length = 214

 Score =  178 bits (452), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 97/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+ +D  ++   +TL+ +GY AVQV  GE +   
Sbjct: 3   MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 62

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFRV + + +   VG       FTVGQ+VDVTG + GKG
Sbjct: 63  VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVTV+ LE+
Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VS+D +R +++VKG +PGA     ++VR + K+
Sbjct: 183 VSIDAERSVLVVKGAIPGATGGD-VIVRPTIKA 214


>gi|284034002|ref|YP_003383933.1| 50S ribosomal protein L3 [Kribbella flavida DSM 17836]
 gi|283813295|gb|ADB35134.1| ribosomal protein L3 [Kribbella flavida DSM 17836]
          Length = 218

 Score =  178 bits (452), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 94/210 (44%), Positives = 128/210 (60%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT  ++   R +PVTV+    C V   RT   +GY  VQ+  G+   + V+K
Sbjct: 9   GLLGTKLGMTQTWDENNRVVPVTVIQAGPCVVTEVRTSASHGYDGVQIAFGDIDPRKVTK 68

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+RG F    V+P++ L E R   D     +G       F  G++VDV+  + GKGF+G 
Sbjct: 69  PLRGHFEKAGVTPRRHLLELRTA-DASEYTLGQEIKAEAFAAGEVVDVSATSKGKGFAGV 127

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GLRATHGV   HRS GS G    PGRVFK  +MAGRMG  +VT +N++V ++D
Sbjct: 128 MKRHGFHGLRATHGVHKKHRSPGSIGGCATPGRVFKGLRMAGRMGNEQVTTQNVKVHAID 187

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +RGLIL+KG VPG  K   +L+R++ K A
Sbjct: 188 AERGLILIKGAVPGP-KGGLVLIRNAAKGA 216


>gi|110833258|ref|YP_692117.1| 50S ribosomal protein L3 [Alcanivorax borkumensis SK2]
 gi|123149718|sp|Q0VSK3|RL3_ALCBS RecName: Full=50S ribosomal protein L3
 gi|110646369|emb|CAL15845.1| 50S ribosomal protein L3 [Alcanivorax borkumensis SK2]
          Length = 211

 Score =  178 bits (452), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 98/212 (46%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GV+ RK GMT V+  EG  +PVTV+ +   +V   +T + +GY AVQV  GE +   
Sbjct: 1   MAIGVIGRKCGMTRVFTEEGVSVPVTVIEVGPNRVSQVKTEESDGYQAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+   V   + ++EFR +  +     GS  +   F  GQ++DVTG + GKGF
Sbjct: 61  VTKAQAGHFAKAGVEAGRGVWEFRAEAGE--FEAGSSVTVEGFEAGQMIDVTGTSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF    ATHG S+SHR+ GS G  Q PGRVFK KKMAG +G  RVTV+NLEVV
Sbjct: 119 AGGVKRWNFSTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHLGAERVTVQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  + L+LVKG VPGA     ++VR + K+
Sbjct: 179 RVDADKNLLLVKGAVPGATGGD-VIVRLAVKA 209


>gi|225560374|gb|EEH08655.1| 50S ribosomal protein L3 [Ajellomyces capsulatus G186AR]
          Length = 301

 Score =  178 bits (452), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 90/201 (44%), Positives = 135/201 (67%), Gaps = 2/201 (0%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GMT ++++E G+RIP T+L LD  QV+ H+TL KNGY AVQ+G G    +
Sbjct: 71  LRTGTLAIKKGMTAIFDLETGKRIPCTILQLDRVQVISHKTLRKNGYYAVQIGCGWKHER 130

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            V++PM G F++  V+PK+ + EFRV+ ++ LLP+G + + ++F  GQ VD    + G G
Sbjct: 131 AVTRPMLGHFAANGVAPKRHIHEFRVKDENGLLPIGEMINANWFQEGQYVDARSNSRGMG 190

Query: 120 FSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKRH F G   +HGVS++HR    S   +    RV+  KKMAG MG  +VT++NL+
Sbjct: 191 FAGVMKRHGFHGQDRSHGVSLTHRSMGSSGPGQGGGSRVYPGKKMAGNMGNKQVTLQNLK 250

Query: 179 VVSVDDKRGLILVKGCVPGAK 199
           V+ VD ++G+++V G V G K
Sbjct: 251 VLKVDAEKGIVVVNGSVSGPK 271


>gi|91229293|ref|ZP_01262910.1| 50S ribosomal protein L3 [Vibrio alginolyticus 12G01]
 gi|262392516|ref|YP_003284370.1| 50S ribosomal protein L3p [Vibrio sp. Ex25]
 gi|269964734|ref|ZP_06178972.1| 50S ribosomal protein L3 [Vibrio alginolyticus 40B]
 gi|91187418|gb|EAS73766.1| 50S ribosomal protein L3 [Vibrio alginolyticus 12G01]
 gi|262336110|gb|ACY49905.1| LSU ribosomal protein L3p (L3e) [Vibrio sp. Ex25]
 gi|269830633|gb|EEZ84854.1| 50S ribosomal protein L3 [Vibrio alginolyticus 40B]
          Length = 209

 Score =  178 bits (452), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 97/209 (46%), Positives = 134/209 (64%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+  EG  IPVTV+ ++  +V   +TL+ +GY A+QV AG  K   V+K
Sbjct: 3   GLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
              G F+   V   + L+EFR++  ++   VGS  +   F   + VDVTG + GKGF GA
Sbjct: 63  AEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGSELTVELFNETKKVDVTGTSKGKGFQGA 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|308446847|ref|XP_003087274.1| hypothetical protein CRE_26933 [Caenorhabditis remanei]
 gi|308258134|gb|EFP02087.1| hypothetical protein CRE_26933 [Caenorhabditis remanei]
          Length = 218

 Score =  178 bits (452), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 94/210 (44%), Positives = 131/210 (62%), Gaps = 1/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++  G+ +PVTV+ +    V   RT + +GY AVQ+ AG+   + V++
Sbjct: 10  GLLGTKLGMTQVWDENGKVVPVTVIEVAPNVVTQIRTAEVDGYSAVQIAAGQIDPRKVNQ 69

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V+P++ L E R     D      +     F  GQ +DV G + GKGF+G 
Sbjct: 70  PTAGHFAKAGVTPRRHLTEVRTADAADYSLGQELTIDGTFEAGQKIDVVGTSKGKGFAGV 129

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF G+ A+HG   +HR  GS G    PGRVFK ++MAGRMGG RVTV+NL V +VD
Sbjct: 130 MKRHNFSGVSASHGAHRNHRKPGSIGGAATPGRVFKGQRMAGRMGGERVTVQNLTVHAVD 189

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++GLIL+KG VPGA +   + VR++ K A
Sbjct: 190 AEKGLILIKGAVPGA-RGRLVFVRNAVKGA 218


>gi|157960014|ref|YP_001500048.1| 50S ribosomal protein L3 [Shewanella pealeana ATCC 700345]
 gi|189029481|sp|A8GYX6|RL3_SHEPA RecName: Full=50S ribosomal protein L3
 gi|157845014|gb|ABV85513.1| ribosomal protein L3 [Shewanella pealeana ATCC 700345]
          Length = 212

 Score =  178 bits (452), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 93/206 (45%), Positives = 128/206 (62%), Gaps = 1/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++N +G  +PVTV+ +   +V   RTLD +GY A+QV  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFNEDGASVPVTVIEIAANRVTQVRTLDTDGYRALQVTTGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++KP  G F+   V   + L+E R+   + + + VG+  +   F     VDVTG + GKG
Sbjct: 61  ITKPEAGHFAKAGVEAGRGLWEMRLADGEGEGIEVGAELNVDIFADIAKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S++HR++GS G  Q PGRVFK KKM+G MG  RVT +NLEV
Sbjct: 121 FQGGIKRWNFATQDATHGNSLAHRANGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205
           + VD +R L+LVKG VPGA     I+
Sbjct: 181 IRVDAERNLLLVKGAVPGATNGDLII 206


>gi|221201565|ref|ZP_03574603.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD2M]
 gi|221207360|ref|ZP_03580370.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD2]
 gi|221213498|ref|ZP_03586473.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD1]
 gi|254253517|ref|ZP_04946835.1| Ribosomal protein L3 [Burkholderia dolosa AUO158]
 gi|124896126|gb|EAY70006.1| Ribosomal protein L3 [Burkholderia dolosa AUO158]
 gi|221166950|gb|EED99421.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD1]
 gi|221172948|gb|EEE05385.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD2]
 gi|221178381|gb|EEE10790.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD2M]
          Length = 220

 Score =  178 bits (452), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 93/200 (46%), Positives = 127/200 (63%), Gaps = 1/200 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTV+ + + +V   +T++ +GY AVQV  G  +   
Sbjct: 5   MSLGLVGRKVGMTRIFTAEGDSIPVTVVDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 64

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR+       L  G++  P  F VGQ VDV G++IGKG
Sbjct: 65  VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 124

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NFG  RA+HG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 125 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 184

Query: 180 VSVDDKRGLILVKGCVPGAK 199
             +D +R L+LVKG +PGAK
Sbjct: 185 ARIDAERKLLLVKGAIPGAK 204


>gi|58584599|ref|YP_198172.1| 50S ribosomal protein L3 [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|58418915|gb|AAW70930.1| Ribosomal protein L3 [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
          Length = 241

 Score =  178 bits (452), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 99/215 (46%), Positives = 141/215 (65%), Gaps = 6/215 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++   +G T +Y+    R+ VT+LHL    +V  R  DK GY +V +G G    KN+
Sbjct: 9   RIGLLMTNIGHTAIYS-NNSRVAVTLLHLSETYIVDVRRQDKCGYNSVILGIGN--FKNI 65

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP   +   + +S + KL+E R+  D   +  G     ++F VGQ +D+T  +IGKGF+
Sbjct: 66  AKPQLEYLKKMGISNRCKLYESRLS-DLSGIECGKKVGVNHFVVGQYLDITSYSIGKGFA 124

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF GLRA+HGVSI+HRS GSTG  QDPGRVFK K+MAG +G +RVTV+N+E++S
Sbjct: 125 GVMKRHNFCGLRASHGVSIAHRSQGSTGQCQDPGRVFKGKRMAGHLGSSRVTVQNMEILS 184

Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVN 215
           +D     I+VKG  VPG  KNS++ V+D+ K  ++
Sbjct: 185 IDHGNSTIVVKGNNVPGF-KNSYVFVKDAIKKPLH 218


>gi|325088644|gb|EGC41954.1| 50S ribosomal protein [Ajellomyces capsulatus H88]
          Length = 301

 Score =  178 bits (452), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 90/201 (44%), Positives = 135/201 (67%), Gaps = 2/201 (0%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GMT ++++E G+RIP T+L LD  QV+ H+TL KNGY AVQ+G G    +
Sbjct: 71  LRTGTLAIKKGMTAIFDLETGKRIPCTILQLDRVQVISHKTLKKNGYYAVQIGCGWKHER 130

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            V++PM G F++  V+PK+ + EFRV+ ++ LLP+G + + ++F  GQ VD    + G G
Sbjct: 131 AVTRPMLGHFAANGVAPKRHIHEFRVKDENGLLPIGEMINANWFQEGQYVDARSNSRGMG 190

Query: 120 FSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKRH F G   +HGVS++HR    S   +    RV+  KKMAG MG  +VT++NL+
Sbjct: 191 FAGVMKRHGFHGQDRSHGVSLTHRSMGSSGPGQGGGSRVYPGKKMAGNMGNKQVTLQNLK 250

Query: 179 VVSVDDKRGLILVKGCVPGAK 199
           V+ VD ++G+++V G V G K
Sbjct: 251 VLKVDAEKGIVVVNGNVSGPK 271


>gi|320009102|gb|ADW03952.1| 50S ribosomal protein L3 [Streptomyces flavogriseus ATCC 33331]
          Length = 214

 Score =  178 bits (452), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 98/210 (46%), Positives = 129/210 (61%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+  KLGMT V++   R +PVTV+    C V   RT D +GY +VQ+  GE   + V+K
Sbjct: 7   GVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G 
Sbjct: 67  PLKGHFAKADVTPRRHLVELRT-PDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF GL A HGV   HRS GS G    PGRVFK  +MAGRMG  RVT +NL + +VD
Sbjct: 126 MKRHNFKGLGAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++GL+L+KG VPG      +LVR + K A
Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214


>gi|152998271|ref|YP_001343106.1| 50S ribosomal protein L3 [Marinomonas sp. MWYL1]
 gi|189042850|sp|A6W392|RL3_MARMS RecName: Full=50S ribosomal protein L3
 gi|150839195|gb|ABR73171.1| ribosomal protein L3 [Marinomonas sp. MWYL1]
          Length = 212

 Score =  178 bits (452), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 95/201 (47%), Positives = 128/201 (63%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           +V RK GMT ++  +G  +PVTV+ ++  +V   +T + +GY AVQV  G  +   V+K 
Sbjct: 5   LVGRKAGMTRIFTEDGVSVPVTVIEVEPNRVTQVKTAETDGYQAVQVTVGSRRSSRVNKA 64

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
             G ++  NV   + L+EFR+  D+  + VG   + + F   Q+VDVTG + GKGF GA+
Sbjct: 65  AAGHYAKANVEAGRGLWEFRLAGDEKEINVGDELTVADFESIQMVDVTGQSKGKGFQGAI 124

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHNF    ATHG S+SHR+ GS G  Q PGRV+K KKMAG MG  +VT ++LEVV VD 
Sbjct: 125 KRHNFSMQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGHMGAAQVTTQSLEVVRVDT 184

Query: 185 KRGLILVKGCVPGAKKNSWIL 205
           +R LILVKG VPGA     IL
Sbjct: 185 ERNLILVKGAVPGAVNGDVIL 205


>gi|119947126|ref|YP_944806.1| ribosomal protein L3 [Psychromonas ingrahamii 37]
 gi|166233184|sp|A1T0E2|RL3_PSYIN RecName: Full=50S ribosomal protein L3
 gi|119865730|gb|ABM05207.1| LSU ribosomal protein L3P [Psychromonas ingrahamii 37]
          Length = 212

 Score =  178 bits (452), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 102/213 (47%), Positives = 133/213 (62%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  +G  IPVTVL     +V   +TLD +GY A+QV AG  K   
Sbjct: 1   MTIGLIGRKVGMTRVFTEDGVSIPVTVLECSPNRVTQVKTLDTDGYQALQVTAGSKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP  G F+   V   + L+EF +  ++   + VG+  S   F     VDVTG + GKG
Sbjct: 61  VNKPEAGHFAKAGVEAGRGLWEFTLADNEGADIKVGAELSVELFNEINKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F GA+KR NF    ATHG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLEV
Sbjct: 121 FQGAIKRWNFSMQDATHGNSVSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LVKG V GA KN  ++++ + K+
Sbjct: 181 VRVDIERNLLLVKGAVAGA-KNGDVIIKPAVKA 212


>gi|312127226|ref|YP_003992100.1| 50S ribosomal protein l3 [Caldicellulosiruptor hydrothermalis 108]
 gi|311777245|gb|ADQ06731.1| 50S ribosomal protein L3 [Caldicellulosiruptor hydrothermalis 108]
          Length = 210

 Score =  178 bits (452), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 102/212 (48%), Positives = 132/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V++  GR IPVTV+    C VV  +T++K+GY A+QVG  + K   
Sbjct: 1   MTKGILGKKIGMTQVFDEAGRAIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+RG F+   V PK+ L E R+ KD D   VG       F  G+ VDVTG++  KGF
Sbjct: 61  LNKPLRGHFAKHGVKPKRFLRELRL-KDADKYEVGQEIRVDIFQPGERVDVTGISKAKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       +HG S+ HR  GS G    P R F  KKM GRMGG RVTV NL+VV
Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  R L+LVKG VPG  KNS +++RDS KS
Sbjct: 179 KVDPDRNLLLVKGSVPG-NKNSLLIIRDSVKS 209


>gi|293610824|ref|ZP_06693124.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827168|gb|EFF85533.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 212

 Score =  178 bits (452), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 97/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+ +D  ++   +TL+ +GY AVQV  GE +   
Sbjct: 1   MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFRV + + +   VG       FTVGQ+VDVTG + GKG
Sbjct: 61  VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQVVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVTV+ LE+
Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VS+D +R +++VKG +PGA     ++VR + K+
Sbjct: 181 VSIDAERSVLVVKGAIPGATGGD-VIVRPTIKA 212


>gi|282860810|ref|ZP_06269876.1| ribosomal protein L3 [Streptomyces sp. ACTE]
 gi|282564546|gb|EFB70082.1| ribosomal protein L3 [Streptomyces sp. ACTE]
          Length = 214

 Score =  178 bits (452), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 98/210 (46%), Positives = 129/210 (61%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+  KLGMT V++   R +PVTV+    C V   RT D +GY +VQ+  GE   + V+K
Sbjct: 7   GVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G 
Sbjct: 67  PLKGHFAKADVTPRRHLVELRT-PDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF GL A HGV   HRS GS G    PGRVFK  +MAGRMG  RVT +NL + +VD
Sbjct: 126 MKRHNFKGLGAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++GL+L+KG VPG      +LVR + K A
Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214


>gi|182436627|ref|YP_001824346.1| 50S ribosomal protein L3 [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|326777249|ref|ZP_08236514.1| 50S ribosomal protein L3 [Streptomyces cf. griseus XylebKG-1]
 gi|226730571|sp|B1W407|RL3_STRGG RecName: Full=50S ribosomal protein L3
 gi|178465143|dbj|BAG19663.1| putative 50S ribosomal protein L3 [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326657582|gb|EGE42428.1| 50S ribosomal protein L3 [Streptomyces cf. griseus XylebKG-1]
          Length = 214

 Score =  178 bits (452), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 98/210 (46%), Positives = 128/210 (60%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+  KLGMT V++   R +PVTV+    C V   RT D +GY AVQ+  GE   + V+K
Sbjct: 7   GVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G 
Sbjct: 67  PLKGHFAKADVTPRRHLVELRTP-DASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL + +VD
Sbjct: 126 MKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++GL+L+KG VPG      +LVR + K A
Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214


>gi|161523429|ref|YP_001578441.1| 50S ribosomal protein L3 [Burkholderia multivorans ATCC 17616]
 gi|189351798|ref|YP_001947426.1| 50S ribosomal protein L3 [Burkholderia multivorans ATCC 17616]
 gi|226725141|sp|A9ADJ3|RL3_BURM1 RecName: Full=50S ribosomal protein L3
 gi|160340858|gb|ABX13944.1| ribosomal protein L3 [Burkholderia multivorans ATCC 17616]
 gi|189335820|dbj|BAG44890.1| large subunit ribosomal protein L3 [Burkholderia multivorans ATCC
           17616]
          Length = 216

 Score =  178 bits (452), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 93/200 (46%), Positives = 127/200 (63%), Gaps = 1/200 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTV+ + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVVDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR+       L  G++  P  F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NFG  RA+HG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAK 199
             +D +R L+LVKG +PGAK
Sbjct: 181 ARIDAERKLLLVKGAIPGAK 200


>gi|312622045|ref|YP_004023658.1| 50S ribosomal protein l3 [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202512|gb|ADQ45839.1| 50S ribosomal protein L3 [Caldicellulosiruptor kronotskyensis 2002]
          Length = 210

 Score =  178 bits (452), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT +++  GR IPVTV+    C VV  +T++K+GY A+QVG  + K   
Sbjct: 1   MTKGILGKKIGMTQIFDEAGRAIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+RG F+   V PK+ L E R+ KD D   VG       F  G+ VDVTG++  KGF
Sbjct: 61  LNKPLRGHFAKHGVKPKRFLRELRL-KDADKYEVGQEIRVDIFQPGERVDVTGISKAKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       +HG S+ HR  GS G    P R F  KKM GRMGG RVTV NL+VV
Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  R L+LVKG VPG  KNS +++RDS KS
Sbjct: 179 KVDPDRNLLLVKGSVPG-NKNSLLIIRDSVKS 209


>gi|257069508|ref|YP_003155763.1| 50S ribosomal protein L3P [Brachybacterium faecium DSM 4810]
 gi|256560326|gb|ACU86173.1| LSU ribosomal protein L3P [Brachybacterium faecium DSM 4810]
          Length = 226

 Score =  178 bits (451), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 96/210 (45%), Positives = 132/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SGV+  KLGMT V++  G+ +PVTV+      V   R+++ +GY AVQ+  G+   + VS
Sbjct: 14  SGVLGTKLGMTQVWDENGKLVPVTVVQTGANVVTQIRSVETDGYDAVQIAFGQIDPRKVS 73

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +P+RG F    V+P++ L E R     +   +G     S F  GQ VDV G + GKG +G
Sbjct: 74  QPLRGHFEKAGVTPRRHLVELRTVNAAEYT-LGQEIDASVFEAGQKVDVVGTSKGKGTAG 132

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    PGRVFK ++MAGRMGG+R +V+NL V +V
Sbjct: 133 VMKRHGFAGVGASHGQHRNHRKPGSIGGASTPGRVFKGQRMAGRMGGDRTSVQNLTVHAV 192

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D ++GL+LVKG VPGA K   +LVR + KS
Sbjct: 193 DVEKGLVLVKGAVPGA-KGGLVLVRSAVKS 221


>gi|313903151|ref|ZP_07836545.1| LSU ribosomal protein L3P [Thermaerobacter subterraneus DSM 13965]
 gi|313466653|gb|EFR62173.1| LSU ribosomal protein L3P [Thermaerobacter subterraneus DSM 13965]
          Length = 217

 Score =  178 bits (451), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 98/210 (46%), Positives = 134/210 (63%), Gaps = 3/210 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RKLGMT +++ EGR +PVTV+    C VV  RT +++GY AVQ+G GE K + 
Sbjct: 1   MGVGLLGRKLGMTQIFDDEGRAVPVTVIQAGPCVVVQTRTQERDGYRAVQLGFGEIKPRK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP-VGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KPM G F+   V+P + L EFR++ + + +P VG   +   F  G+ VDVTG + GKG
Sbjct: 61  VNKPMAGHFARAGVNPVRVLREFRLEGEGEPMPEVGQQLTVELFKAGEYVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G + RH FG    +HG S  HR  GS      PGRVFK ++MAGR G  RVTV+ L+V
Sbjct: 121 FLGPVARHGFGRGPMSHG-SKYHRGPGSLAPSTFPGRVFKGRRMAGRTGNRRVTVRGLQV 179

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           V VD +R L+LVKG VPG  + S + +R +
Sbjct: 180 VRVDPERNLLLVKGAVPGP-RGSVVAIRKT 208


>gi|222529730|ref|YP_002573612.1| 50S ribosomal protein L3 [Caldicellulosiruptor bescii DSM 6725]
 gi|254803649|sp|B9MKI1|RL3_ANATD RecName: Full=50S ribosomal protein L3
 gi|222456577|gb|ACM60839.1| ribosomal protein L3 [Caldicellulosiruptor bescii DSM 6725]
          Length = 210

 Score =  178 bits (451), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT +++  GR IPVTV+    C VV  +T++K+GY A+QVG  + K   
Sbjct: 1   MTKGILGKKIGMTQIFDEAGRAIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+RG F+   V PK+ L E R+ KD D   VG       F  G+ VDVTG++  KGF
Sbjct: 61  LNKPLRGHFAKHGVKPKRFLRELRL-KDADKYEVGQEIRVDIFQPGEKVDVTGISKAKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       +HG S+ HR  GS G    P R F  KKM GRMGG RVTV NL+VV
Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  R L+LVKG VPG  KNS +++RDS KS
Sbjct: 179 KVDPDRNLLLVKGSVPG-NKNSLLIIRDSVKS 209


>gi|167854921|ref|ZP_02477697.1| 50S ribosomal protein L3 [Haemophilus parasuis 29755]
 gi|167853988|gb|EDS25226.1| 50S ribosomal protein L3 [Haemophilus parasuis 29755]
          Length = 208

 Score =  178 bits (451), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 99/209 (47%), Positives = 134/209 (64%), Gaps = 3/209 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT ++N +G  +PVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+K
Sbjct: 3   GLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKASRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V   + L+EFR + ++    +G   +   FT  + VDVTG + GKGF G 
Sbjct: 63  PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFTDVKKVDVTGTSKGKGFQGG 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV VD
Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 180

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+LVKG VPGA  NS ++V+ + K+
Sbjct: 181 AERKLLLVKGSVPGA-TNSDVIVKPAVKA 208


>gi|319411891|emb|CBQ73934.1| related to MRPL9-mitochondrial ribosomal protein, large subunit
           [Sporisorium reilianum]
          Length = 378

 Score =  178 bits (451), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 104/206 (50%), Positives = 129/206 (62%), Gaps = 8/206 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH----RTLDKNGYMAVQVGAGEA 56
            R G++A K GMT  +   G RIP TVL +   QV  H        ++ Y A+QV A + 
Sbjct: 96  QRVGLIAVKRGMTSFFLPNGERIPATVLQVHTNQVSAHIGFGPDATESTYTALQVAAVDT 155

Query: 57  KVKN-VSKPMRGFFSSVNVSPKKKLF-EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGM 114
           K  N V+K +RG   +  +S  KK+  EFRV   D L+P+G+  S  +F  GQ +DV  +
Sbjct: 156 KSINLVTKQIRGHLKTAGISRGKKIIREFRV-SSDALVPLGTQLSAVHFVPGQSIDVRAI 214

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV-T 173
           T G GF G MKRH F GLRA+HGVSISHRSHGSTG  QDPGRV+   KMAGRMGGN+  +
Sbjct: 215 TRGHGFQGVMKRHGFHGLRASHGVSISHRSHGSTGANQDPGRVWPGTKMAGRMGGNKHGS 274

Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAK 199
           + NL VV VD K+ LI VKG VPG K
Sbjct: 275 IHNLLVVRVDAKKDLIYVKGNVPGPK 300


>gi|146297285|ref|YP_001181056.1| 50S ribosomal protein L3 [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|166233129|sp|A4XLT0|RL3_CALS8 RecName: Full=50S ribosomal protein L3
 gi|145410861|gb|ABP67865.1| LSU ribosomal protein L3P [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 210

 Score =  178 bits (451), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 100/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V++  G+ +PVTV+    C VV  +T++K+GY A+QVG  + K   
Sbjct: 1   MTKGILGKKIGMTQVFDEAGKVVPVTVIEAGPCVVVQKKTVEKDGYAAIQVGFEDIKETK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+RG F+   V PK+ L E R+ KD D   VG       F+ G+ VDVTG++  KGF
Sbjct: 61  LNKPLRGHFAKHGVKPKRYLRELRL-KDADKYEVGQEIRVDIFSPGERVDVTGISKAKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       +HG S+ HR  GS G    P R F  KKM GRMGG RVTV NL+VV
Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGQRVTVLNLQVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPG  KNS +++RDS KS
Sbjct: 179 KVDPERNLLLVKGSVPG-NKNSLLIIRDSVKS 209


>gi|50086215|ref|YP_047725.1| 50S ribosomal protein L3 [Acinetobacter sp. ADP1]
 gi|81827372|sp|Q6F7R2|RL3_ACIAD RecName: Full=50S ribosomal protein L3
 gi|49532191|emb|CAG69903.1| 50S ribosomal protein L3 [Acinetobacter sp. ADP1]
          Length = 212

 Score =  178 bits (451), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+ +D  ++   +TL+ +GY AVQV  GE +   
Sbjct: 1   MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFRV + + +   +G       FTVGQ+VDVTG + GKG
Sbjct: 61  VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVTV+ LE+
Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VS+D +R +++VKG +PGA     ++VR + K+
Sbjct: 181 VSIDAERSVLVVKGAIPGATGGD-VIVRPTIKA 212


>gi|56477594|ref|YP_159183.1| 50S ribosomal protein L3 [Aromatoleum aromaticum EbN1]
 gi|81821104|sp|Q5P332|RL3_AZOSE RecName: Full=50S ribosomal protein L3
 gi|56313637|emb|CAI08282.1| 50S ribosomal protein L3 [Aromatoleum aromaticum EbN1]
          Length = 214

 Score =  178 bits (451), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 100/213 (46%), Positives = 131/213 (61%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +GR +PVTVL + N +V   +T + +GY AVQV  G+ +   
Sbjct: 1   MSLGLVGRKVGMTRIFAEDGRSVPVTVLDVSNNRVTQIKTPESDGYAAVQVTFGKRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V KP+ G  +   V     L EFRV+ +       G V     F VGQ VDVTG +IGKG
Sbjct: 61  VGKPLAGHLAKAGVEAGHMLKEFRVETEQVAGFKAGDVVGVDLFAVGQKVDVTGTSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG  KRHNF   RA+HG S+SH + GS G  QDPGRVF  K+MAG+ G    T + LEV
Sbjct: 121 FSGVGKRHNFSSNRASHGNSVSHNAPGSIGMAQDPGRVFPGKRMAGQYGNTTCTTQGLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LVKG VPG+K    ++VR + K+
Sbjct: 181 VRVDVERQLLLVKGAVPGSKGGD-VIVRPAVKA 212


>gi|254283460|ref|ZP_04958428.1| ribosomal protein L3 [gamma proteobacterium NOR51-B]
 gi|219679663|gb|EED36012.1| ribosomal protein L3 [gamma proteobacterium NOR51-B]
          Length = 211

 Score =  178 bits (451), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 98/206 (47%), Positives = 127/206 (61%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT V+  EG  +PVTV+ +   +V   + LD +GY A+QV AG+ K   
Sbjct: 1   MTIGVVGRKSGMTRVFTDEGVSVPVTVVEIAPNRVTQLKDLDTDGYRAIQVTAGDRKASK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS+   G F+   V+    L+EFR+   ++   +G+  +   F  GQ VDV G + GKGF
Sbjct: 61  VSRAEAGHFAKAGVAAGNGLWEFRLDGSEEQFEIGAELTVERFEQGQKVDVCGQSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR NF    ATHG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT + LEVV
Sbjct: 121 QGAVKRWNFRMQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQGLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
            VD +R L+L+KG VPGA     I++
Sbjct: 181 RVDVERNLLLIKGAVPGAPGGDVIVL 206


>gi|323492119|ref|ZP_08097281.1| 50S ribosomal protein L3 [Vibrio brasiliensis LMG 20546]
 gi|323313680|gb|EGA66782.1| 50S ribosomal protein L3 [Vibrio brasiliensis LMG 20546]
          Length = 209

 Score =  178 bits (451), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 96/209 (45%), Positives = 134/209 (64%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+  EG  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   VSK
Sbjct: 3   GLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGAKKANRVSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF GA
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGAELTVELFNDTKKVDVTGTSKGKGFQGA 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+L+KG VPG+   + ++V+ + K+
Sbjct: 182 AERNLLLIKGAVPGSTGGN-VIVKPAVKA 209


>gi|312884703|ref|ZP_07744404.1| 50S ribosomal protein L3 [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367616|gb|EFP95167.1| 50S ribosomal protein L3 [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 209

 Score =  178 bits (451), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 96/209 (45%), Positives = 134/209 (64%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+  EG  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   V+K
Sbjct: 3   GLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR++  ++   VGS  +   F   + VDVTG + GKGF GA
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNDTKKVDVTGTSKGKGFQGA 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+L+KG VPG+   + ++V+ + K+
Sbjct: 182 AERNLLLIKGAVPGSTGGN-VIVKPAVKA 209


>gi|91785465|ref|YP_560671.1| 50S ribosomal protein L3 [Burkholderia xenovorans LB400]
 gi|187925616|ref|YP_001897258.1| 50S ribosomal protein L3 [Burkholderia phytofirmans PsJN]
 gi|296163321|ref|ZP_06846082.1| 50S ribosomal protein L3 [Burkholderia sp. Ch1-1]
 gi|123062494|sp|Q13TH0|RL3_BURXL RecName: Full=50S ribosomal protein L3
 gi|226725143|sp|B2T751|RL3_BURPP RecName: Full=50S ribosomal protein L3
 gi|91689419|gb|ABE32619.1| LSU ribosomal protein L3P [Burkholderia xenovorans LB400]
 gi|187716810|gb|ACD18034.1| ribosomal protein L3 [Burkholderia phytofirmans PsJN]
 gi|295886460|gb|EFG66317.1| 50S ribosomal protein L3 [Burkholderia sp. Ch1-1]
          Length = 219

 Score =  178 bits (451), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 94/200 (47%), Positives = 126/200 (63%), Gaps = 1/200 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGTRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EF++       L  G+V  P  F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVQAGEILKEFQIDAAKAAELSNGTVVGPDLFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RA+HG S SH   GS G  QDPGRVF  K+M G MG + VTV+NLE+
Sbjct: 121 YAGTIKRYNFASGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDDTVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAK 199
             +D  R L+LVKG VPGAK
Sbjct: 181 ARIDADRKLLLVKGAVPGAK 200


>gi|90417569|ref|ZP_01225487.1| Ribosomal protein L3 [marine gamma proteobacterium HTCC2207]
 gi|90330590|gb|EAS45886.1| Ribosomal protein L3 [marine gamma proteobacterium HTCC2207]
          Length = 211

 Score =  177 bits (450), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 94/212 (44%), Positives = 129/212 (60%), Gaps = 1/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT V+  +G  IPVTV+      V   ++++ +GY A+Q+  G  K   
Sbjct: 1   MSIGIVGRKCGMTRVFTEDGVSIPVTVVEATPNHVTQIKSVETDGYSAIQITTGSRKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK   G ++   V   +  +EFR +   D   VG   +   F  GQ+VDVTG + GKGF
Sbjct: 61  VSKAQAGHYAKAGVEAGRGQWEFRTEGSSDDFAVGGSLTVERFEAGQMVDVTGTSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG+MG  +VT +NLE+V
Sbjct: 121 QGGVKRWNFAMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNAQVTTQNLEIV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA   + ++VR + K+
Sbjct: 181 RVDAERNLLLIKGAVPGAPGGN-VVVRPAVKA 211


>gi|254492312|ref|ZP_05105485.1| ribosomal protein L3 [Methylophaga thiooxidans DMS010]
 gi|224462484|gb|EEF78760.1| ribosomal protein L3 [Methylophaga thiooxydans DMS010]
          Length = 210

 Score =  177 bits (450), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 96/212 (45%), Positives = 138/212 (65%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK GMT V++ +G   PVTV+ ++  +V   +T+D +GY A+QV  GE K   
Sbjct: 1   MTIGLIGRKRGMTRVFSEDGVSTPVTVIEVEPNRVSQLKTVDTDGYNAIQVTVGERKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP  G F+    +  +K+ EFRV++  +L  VG+      F  GQ +DV+G+T GKGF
Sbjct: 61  VTKPEAGHFAKAQAAAGRKVAEFRVEEVSEL-EVGAELKVDLFENGQQIDVSGITKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR+ F G  ATHG S+SHR+ GS G  Q PGRVFK KKMAG MG  + T++NL +V
Sbjct: 120 AGVVKRYGFRGGDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGDKKRTLQNLSIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA   S +++R + K+
Sbjct: 180 KVDAERNLLLIKGSVPGA-TGSDVIIRPAVKA 210


>gi|117927515|ref|YP_872066.1| 50S ribosomal protein L3P [Acidothermus cellulolyticus 11B]
 gi|212288244|sp|A0LRM0|RL3_ACIC1 RecName: Full=50S ribosomal protein L3
 gi|117647978|gb|ABK52080.1| LSU ribosomal protein L3P [Acidothermus cellulolyticus 11B]
          Length = 222

 Score =  177 bits (450), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 100/215 (46%), Positives = 129/215 (60%), Gaps = 2/215 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++  GR IPVTV+    C V   RT D++GY AVQ+G G    + V+K
Sbjct: 7   GLLGEKLGMTQVFDESGRVIPVTVVRAGPCVVTQVRTPDRDGYSAVQLGYGAVDPRRVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F +  V+P++ L E R   D     VG   +   FT GQ VDV G++ GKGF+G 
Sbjct: 67  PLAGHFRAAGVTPRRYLAEVRT-GDAAEYTVGQEVTVEIFTPGQRVDVAGVSKGKGFAGL 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF GL  +HG    HRS GS G    PGRVFK  +MAGRMGG RVTV+NL V +V 
Sbjct: 126 MKRHNFRGLPDSHGTERKHRSPGSIGACATPGRVFKGLRMAGRMGGRRVTVQNLAVQAVK 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
            +  L+L++G VPG      + VR + K   N  G
Sbjct: 186 PEENLLLLQGAVPG-PNGGLVYVRTAAKGKANRDG 219


>gi|209521385|ref|ZP_03270098.1| ribosomal protein L3 [Burkholderia sp. H160]
 gi|209498205|gb|EDZ98347.1| ribosomal protein L3 [Burkholderia sp. H160]
          Length = 219

 Score =  177 bits (450), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 94/200 (47%), Positives = 126/200 (63%), Gaps = 1/200 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVTFGTRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EF++       L  G+V  P  F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVQAGEILKEFQIDAAKAAELSNGTVVGPELFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RA+HG S SH   GS G  QDPGRVF  K+M G MG  +VTV+NLE+
Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDEKVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAK 199
             +D  R L+LVKG VPGAK
Sbjct: 181 ARIDADRKLLLVKGAVPGAK 200


>gi|90020607|ref|YP_526434.1| 50S ribosomal protein L3 [Saccharophagus degradans 2-40]
 gi|109893552|sp|Q21M57|RL3_SACD2 RecName: Full=50S ribosomal protein L3
 gi|89950207|gb|ABD80222.1| LSU ribosomal protein L3P [Saccharophagus degradans 2-40]
          Length = 214

 Score =  177 bits (450), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 97/215 (45%), Positives = 133/215 (61%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++  +G  +PVTV+ +D  ++   ++++ +GY AVQV  G  +   
Sbjct: 1   MTIGIVGRKSGMTRIFTDDGLSVPVTVVEVDPNRITQVKSVETDGYAAVQVTVGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKP  G F+   V   + + E R  +  +   VG + +   F  GQ VDVTG + GKGF
Sbjct: 61  VSKPEAGHFAKAEVEAGRTVLELR-NESGEQFEVGGLLTVEAFEAGQKVDVTGASKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR+NF    ATHG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLEVV
Sbjct: 120 AGVIKRYNFRMQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAARVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            VD +R L+L+KG VPGA     +++R + KS  N
Sbjct: 180 RVDVERNLLLIKGAVPGAPGGD-VIIRPAVKSRNN 213


>gi|187476539|ref|YP_784563.1| 50S ribosomal protein L3 [Bordetella avium 197N]
 gi|109893413|sp|Q2L2G0|RL3_BORA1 RecName: Full=50S ribosomal protein L3
 gi|115421125|emb|CAJ47609.1| 50S ribosomal protein L3 [Bordetella avium 197N]
          Length = 233

 Score =  177 bits (450), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 101/213 (47%), Positives = 131/213 (61%), Gaps = 3/213 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+V RK+GMT ++  EG  IPVTVL + N +V   ++L+ +GY A+QV  G  +   V
Sbjct: 16  RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQVKSLESDGYAAIQVTYGNRRASRV 75

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFS-PSYFTVGQLVDVTGMTIGKG 119
           +K   G F+         L EFR+          GSV +  S F  GQ VDVTG TIGKG
Sbjct: 76  TKAEAGHFAKAGAEAGSILKEFRLDPTRAAEFTAGSVIAVESVFEAGQQVDVTGTTIGKG 135

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRHNFG  RA+HG S SHR  GS G  QDPGR+F  K+MAG +G    TV+NL+V
Sbjct: 136 FAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMAGHLGDVTRTVQNLDV 195

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +RGL+LVKG VPG      ++VR + K+
Sbjct: 196 VRVDVERGLLLVKGAVPG-HAGGDVIVRPAVKA 227


>gi|302536251|ref|ZP_07288593.1| 50S ribosomal protein L3 [Streptomyces sp. C]
 gi|302445146|gb|EFL16962.1| 50S ribosomal protein L3 [Streptomyces sp. C]
          Length = 214

 Score =  177 bits (450), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 98/210 (46%), Positives = 129/210 (61%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+  KLGMT V++   R +PVTV+    C V   RT D +GY +VQ+  GE   + V+K
Sbjct: 7   GVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDIDGYESVQIAFGEIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G 
Sbjct: 67  PLKGHFAKADVTPRRHLVELRTS-DASEYTLGQEITAEVFESGVKVDVTGNSKGKGFAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF GL A HGV   HRS GS G    PGRVFK  +MAGRMG  RVT +NL + +VD
Sbjct: 126 MKRHNFRGLGAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++GL+L+KG VPG      +LVR + K A
Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214


>gi|28897031|ref|NP_796636.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus RIMD 2210633]
 gi|153840341|ref|ZP_01993008.1| ribosomal protein L3 [Vibrio parahaemolyticus AQ3810]
 gi|260877949|ref|ZP_05890304.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus AN-5034]
 gi|260897591|ref|ZP_05906087.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus Peru-466]
 gi|260899521|ref|ZP_05907916.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus AQ4037]
 gi|42559620|sp|Q87T13|RL3_VIBPA RecName: Full=50S ribosomal protein L3
 gi|28805239|dbj|BAC58520.1| ribosomal protein L3 [Vibrio parahaemolyticus RIMD 2210633]
 gi|149745999|gb|EDM57129.1| ribosomal protein L3 [Vibrio parahaemolyticus AQ3810]
 gi|308087536|gb|EFO37231.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus Peru-466]
 gi|308089929|gb|EFO39624.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus AN-5034]
 gi|308108784|gb|EFO46324.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus AQ4037]
 gi|328471834|gb|EGF42711.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus 10329]
          Length = 209

 Score =  177 bits (450), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 96/209 (45%), Positives = 134/209 (64%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+  EG  IPVTV+ ++  +V   +TL+ +GY A+QV AG  K   V+K
Sbjct: 3   GLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
              G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF GA
Sbjct: 63  AEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELTVELFNETKKVDVTGTSKGKGFQGA 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|15642591|ref|NP_232224.1| 50S ribosomal protein L3 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|147673700|ref|YP_001218090.1| 50S ribosomal protein L3 [Vibrio cholerae O395]
 gi|153827414|ref|ZP_01980081.1| ribosomal protein L3 [Vibrio cholerae MZO-2]
 gi|153831409|ref|ZP_01984076.1| ribosomal protein L3 [Vibrio cholerae 623-39]
 gi|227082713|ref|YP_002811264.1| ribosomal protein L3 [Vibrio cholerae M66-2]
 gi|229507352|ref|ZP_04396857.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae BX 330286]
 gi|229509725|ref|ZP_04399206.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae B33]
 gi|229513519|ref|ZP_04402983.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae TMA 21]
 gi|229516849|ref|ZP_04406295.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae RC9]
 gi|229521662|ref|ZP_04411080.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae TM 11079-80]
 gi|229524577|ref|ZP_04413982.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae bv. albensis
           VL426]
 gi|229527474|ref|ZP_04416866.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae 12129(1)]
 gi|229606858|ref|YP_002877506.1| 50S ribosomal protein L3 [Vibrio cholerae MJ-1236]
 gi|254292178|ref|ZP_04962948.1| ribosomal protein L3 [Vibrio cholerae AM-19226]
 gi|254851136|ref|ZP_05240486.1| ribosomal protein L3 [Vibrio cholerae MO10]
 gi|255744435|ref|ZP_05418387.1| LSU ribosomal protein L3p (L3e) [Vibrio cholera CIRS 101]
 gi|262170153|ref|ZP_06037842.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae RC27]
 gi|42559699|sp|Q9KNY4|RL3_VIBCH RecName: Full=50S ribosomal protein L3
 gi|172047551|sp|A5F549|RL3_VIBC3 RecName: Full=50S ribosomal protein L3
 gi|254803701|sp|C3LRQ8|RL3_VIBCM RecName: Full=50S ribosomal protein L3
 gi|9657183|gb|AAF95737.1| ribosomal protein L3 [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|146315583|gb|ABQ20122.1| ribosomal protein L3 [Vibrio cholerae O395]
 gi|148873110|gb|EDL71245.1| ribosomal protein L3 [Vibrio cholerae 623-39]
 gi|149738687|gb|EDM53029.1| ribosomal protein L3 [Vibrio cholerae MZO-2]
 gi|150421907|gb|EDN13884.1| ribosomal protein L3 [Vibrio cholerae AM-19226]
 gi|227010601|gb|ACP06813.1| ribosomal protein L3 [Vibrio cholerae M66-2]
 gi|227014485|gb|ACP10695.1| ribosomal protein L3 [Vibrio cholerae O395]
 gi|229335106|gb|EEO00591.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae 12129(1)]
 gi|229338158|gb|EEO03175.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae bv. albensis
           VL426]
 gi|229341256|gb|EEO06260.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae TM 11079-80]
 gi|229345912|gb|EEO10884.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae RC9]
 gi|229349396|gb|EEO14352.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae TMA 21]
 gi|229353199|gb|EEO18138.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae B33]
 gi|229354857|gb|EEO19778.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae BX 330286]
 gi|229369513|gb|ACQ59936.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae MJ-1236]
 gi|254846841|gb|EET25255.1| ribosomal protein L3 [Vibrio cholerae MO10]
 gi|255737960|gb|EET93353.1| LSU ribosomal protein L3p (L3e) [Vibrio cholera CIRS 101]
 gi|262021561|gb|EEY40273.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae RC27]
 gi|327485078|gb|AEA79485.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae LMA3894-4]
          Length = 209

 Score =  177 bits (450), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 96/209 (45%), Positives = 134/209 (64%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   V+K
Sbjct: 3   GLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGSKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR++  ++   VGS  +   F   + VDVTG + GKGF GA
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQGA 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|254383172|ref|ZP_04998526.1| 50S ribosomal protein L3 [Streptomyces sp. Mg1]
 gi|194342071|gb|EDX23037.1| 50S ribosomal protein L3 [Streptomyces sp. Mg1]
          Length = 214

 Score =  177 bits (450), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 98/210 (46%), Positives = 129/210 (61%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+  KLGMT V++   R +PVTV+    C V   RT D +GY +VQ+  GE   + V+K
Sbjct: 7   GVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDIDGYESVQIAFGEIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G 
Sbjct: 67  PLKGHFAKADVTPRRHLVELRTS-DASEYTLGQEITAQVFESGVKVDVTGNSKGKGFAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF GL A HGV   HRS GS G    PGRVFK  +MAGRMG  RVT +NL + +VD
Sbjct: 126 MKRHNFRGLGAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++GL+L+KG VPG      +LVR + K A
Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214


>gi|156044218|ref|XP_001588665.1| hypothetical protein SS1G_10212 [Sclerotinia sclerotiorum 1980]
 gi|154694601|gb|EDN94339.1| hypothetical protein SS1G_10212 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 311

 Score =  177 bits (449), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 91/199 (45%), Positives = 128/199 (64%), Gaps = 2/199 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +  K GMT +Y+ E G R P TV+ LD  QVV H+T +KNGY AVQVGAG     
Sbjct: 74  LRTGALGIKKGMTALYDPETGVRTPCTVVQLDRVQVVAHKTREKNGYYAVQVGAGWKHPS 133

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NVS+P  G F +  V+PK+ + EFRV+ +  LL VG      +F  GQ VD    + G G
Sbjct: 134 NVSRPELGHFEASEVAPKRHMAEFRVKNEGGLLEVGRSIGAEWFIEGQFVDARANSRGMG 193

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MK+  + G  A+HG S +HR+ GS G  Q  G RV   K+MAGRMG ++VT++N++
Sbjct: 194 FAGGMKKWGWSGQPASHGNSKNHRTMGSAGASQGSGSRVHPGKRMAGRMGNHQVTIQNVK 253

Query: 179 VVSVDDKRGLILVKGCVPG 197
           V+ VD ++GL+++ GC+ G
Sbjct: 254 VLKVDAEKGLVILNGCIAG 272


>gi|71278595|ref|YP_267622.1| 50S ribosomal protein L3 [Colwellia psychrerythraea 34H]
 gi|109893422|sp|Q487Z3|RL3_COLP3 RecName: Full=50S ribosomal protein L3
 gi|71144335|gb|AAZ24808.1| ribosomal protein L3 [Colwellia psychrerythraea 34H]
          Length = 212

 Score =  177 bits (449), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 137/213 (64%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V+  +G   PVTV+ ++  +V   +T+D +GY A+QV  G+ K   
Sbjct: 1   MTIGLVGRKVGMTRVFTEDGVSTPVTVIEVEANRVAQVKTVDNDGYSALQVTTGKRKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP  G F+   +   + L+EFR+ +++   +  GS  +   F   +LVDVTG + GKG
Sbjct: 61  VTKPAAGHFAKAGIEAGRGLWEFRLNENEGSDIEAGSEITVEVFNDTKLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHGVS+SHRS+GS G  Q PGRVFK KKM+G MG  R T +NLE+
Sbjct: 121 FQGGIKRWNFTMQHATHGVSLSHRSNGSLGQCQTPGRVFKGKKMSGHMGAVRCTTQNLEL 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+L+KG VPGA  N  ++++ + K+
Sbjct: 181 VRVDAERNLLLIKGAVPGA-INGNVIIKPAVKA 212


>gi|145300935|ref|YP_001143776.1| 50S ribosomal protein L3 [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|166233113|sp|A4ST06|RL3_AERS4 RecName: Full=50S ribosomal protein L3
 gi|142853707|gb|ABO92028.1| ribosomal protein L3 [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 210

 Score =  177 bits (449), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 95/212 (44%), Positives = 134/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+ ++  +V   ++++ +GY A+QV  G  K   
Sbjct: 1   MTIGLVGRKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKSVETDGYNAIQVTTGAKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP  G F+   V   + L+EFR+  + +   VGS          ++VDVTG + GKGF
Sbjct: 61  VTKPEAGHFAKAGVEAGRGLWEFRLN-NGETFTVGSELKVDLLADVKMVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V
Sbjct: 120 AGTVKRHNFRTQDMTHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHMGAERVTTQNLELV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA  N  ++V+ + K+
Sbjct: 180 RVDAERNLLLIKGAVPGA-TNGNVIVKPAVKA 210


>gi|84394648|ref|ZP_00993340.1| 50S ribosomal protein L3 [Vibrio splendidus 12B01]
 gi|86148881|ref|ZP_01067133.1| 50S ribosomal protein L3 [Vibrio sp. MED222]
 gi|218710749|ref|YP_002418370.1| 50S ribosomal protein L3 [Vibrio splendidus LGP32]
 gi|254803702|sp|B7VLF7|RL3_VIBSL RecName: Full=50S ribosomal protein L3
 gi|84374730|gb|EAP91685.1| 50S ribosomal protein L3 [Vibrio splendidus 12B01]
 gi|85833333|gb|EAQ51539.1| 50S ribosomal protein L3 [Vibrio sp. MED222]
 gi|218323768|emb|CAV20125.1| 50S ribosomal protein L3 [Vibrio splendidus LGP32]
          Length = 209

 Score =  177 bits (449), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 95/209 (45%), Positives = 134/209 (64%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT V+  EG  IPVTV+ ++  ++   +TL+ +GY A+QV  G  K   V+K
Sbjct: 3   GLVGRKVGMTRVFTEEGVSIPVTVVEVEANRISQVKTLETDGYAAIQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF GA
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELNVELFNEIKKVDVTGTSKGKGFQGA 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 IKRWNFSTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+L+KG VPG+   + ++V+ + K+
Sbjct: 182 AERNLLLIKGAVPGSTGGN-VIVKPAVKA 209


>gi|307731255|ref|YP_003908479.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1003]
 gi|323527602|ref|YP_004229755.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1001]
 gi|307585790|gb|ADN59188.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1003]
 gi|323384604|gb|ADX56695.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1001]
          Length = 219

 Score =  177 bits (449), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 94/200 (47%), Positives = 125/200 (62%), Gaps = 1/200 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGTRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EF++       L  G+V  P  F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVQAGEILKEFQIDAAKAAELSNGAVVGPDLFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RA+HG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 121 YAGTIKRYNFASGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAK 199
             +D  R L+LVKG VPGAK
Sbjct: 181 ARIDADRKLLLVKGAVPGAK 200


>gi|323357372|ref|YP_004223768.1| ribosomal protein L3 [Microbacterium testaceum StLB037]
 gi|323273743|dbj|BAJ73888.1| ribosomal protein L3 [Microbacterium testaceum StLB037]
          Length = 219

 Score =  177 bits (449), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 95/210 (45%), Positives = 130/210 (61%), Gaps = 1/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++  G+ +PVTV+ +    V   R+L+K+GY AVQ+G G+   + V+K
Sbjct: 11  GLLGTKLGMTQVWDENGKLVPVTVIEVAPNVVTQLRSLEKDGYNAVQIGYGQIDPRKVNK 70

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+   F +  V+P++ L E R     D      +     F  GQLVDV G + GKG +G 
Sbjct: 71  PLTAHFDAAGVTPRRHLTEVRTADAADYTLGQELTVDGLFEAGQLVDVVGTSKGKGTAGV 130

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF G+ A+HG   +HR  GS G    P RVFK  +MAGRMGG RVTV NL V +VD
Sbjct: 131 MKRHNFKGVSASHGAHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGERVTVLNLTVHAVD 190

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++GL+LVKG VPGA +   + VR++ K A
Sbjct: 191 AEKGLMLVKGAVPGA-RGRIVYVRNAVKGA 219


>gi|262370578|ref|ZP_06063903.1| 50S ribosomal protein L3 [Acinetobacter johnsonii SH046]
 gi|262314378|gb|EEY95420.1| 50S ribosomal protein L3 [Acinetobacter johnsonii SH046]
          Length = 214

 Score =  177 bits (449), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 95/213 (44%), Positives = 133/213 (62%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+ +D  ++   +TL+ +GY A+Q+  GE +   
Sbjct: 3   MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAIQITTGERRESR 62

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFR  + D +   VG       FTVGQ+VDVTG + GKG
Sbjct: 63  VTNAQKGHFAKAGVAAGRLVQEFRATEADLEGREVGGTIGVDMFTVGQVVDVTGQSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVTV+ LE+
Sbjct: 123 FQGGVKRWNFRTQDATHGNSLSHRVLGSTGQNQTPGRVFKGKKMAGHLGAERVTVQGLEI 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VS+D +R +++VKG +PGA     + VR + K+
Sbjct: 183 VSIDAERSVLVVKGAIPGATGGD-VTVRPTIKA 214


>gi|297181138|gb|ADI17335.1| hypothetical protein [uncultured Oceanospirillales bacterium
           HF0070_21F08]
          Length = 211

 Score =  177 bits (449), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/212 (46%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GV+ RK GMT V+  EG  +PVTV+ +   +V   +T + +GY AVQV  GE +   
Sbjct: 1   MAIGVIGRKCGMTRVFTEEGISVPVTVIEVTPNRVSQVKTEETDGYEAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP  G F+   V   +   EFR +  +  L  GS  +   F  GQ VDVTG + GKGF
Sbjct: 61  VTKPQAGHFAKAGVEAGRSAGEFRSEVGE--LQAGSEITLEVFEAGQSVDVTGTSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF    ATHG S+SHR+ GS G  Q PGRVFK KKM+G +G  RVTV+NLE+V
Sbjct: 119 AGTVKRWNFRTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMSGHLGAERVTVQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD ++ L+LVKG +PGA     ++VR + K+
Sbjct: 179 RVDAEKNLLLVKGAIPGAAGGD-VIVRPAVKA 209


>gi|331214855|ref|XP_003320108.1| 50S ribosomal protein L3 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309299098|gb|EFP75689.1| 50S ribosomal protein L3 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 367

 Score =  177 bits (449), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 95/211 (45%), Positives = 134/211 (63%), Gaps = 2/211 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN- 60
           R+GV+ARK GMT  ++ +G RIPVTVL L++ QVV H+  +++ Y A+Q+G  +   +N 
Sbjct: 96  RTGVLARKRGMTSFWDSDGIRIPVTVLELEDVQVVGHKYKERDNYDAIQIGCTDKFSRNS 155

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +      ++  ++++PK+K+ EF V       P+G+  S ++F  GQ VDV   + GKGF
Sbjct: 156 IHNAQLKYYKHLDLTPKQKVTEFVVSNHQCFSPIGTSISAAHFVPGQFVDVKSNSKGKGF 215

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR  F G  A+HG +  HR  GSTG  QDPGRV+  KKMAGRMG   VTV+NL V 
Sbjct: 216 AGVMKRWGFSGGNASHGSTKHHRKAGSTGQHQDPGRVWPGKKMAGRMGNQPVTVRNLLVA 275

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +D    LI VKG VPG KK +++ V D+ K
Sbjct: 276 RIDTDMNLIYVKGQVPGPKK-AFVRVTDAEK 305


>gi|299768666|ref|YP_003730692.1| 50S ribosomal protein L3 [Acinetobacter sp. DR1]
 gi|298698754|gb|ADI89319.1| 50S ribosomal protein L3 [Acinetobacter sp. DR1]
          Length = 212

 Score =  177 bits (449), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+ +D  ++   +TL+ +GY AVQV  GE +   
Sbjct: 1   MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFRV + + +   VG       FTVGQ+VDVTG + GKG
Sbjct: 61  VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQVVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVTV+ LE+
Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VS+D +R +++VKG +PG+     ++VR + K+
Sbjct: 181 VSIDAERSVLVVKGAIPGSTGGD-VIVRPTIKA 212


>gi|295838404|ref|ZP_06825337.1| 50S ribosomal protein L3 [Streptomyces sp. SPB74]
 gi|302519661|ref|ZP_07272003.1| 50S ribosomal protein L3 [Streptomyces sp. SPB78]
 gi|318058128|ref|ZP_07976851.1| 50S ribosomal protein L3 [Streptomyces sp. SA3_actG]
 gi|318076019|ref|ZP_07983351.1| 50S ribosomal protein L3 [Streptomyces sp. SA3_actF]
 gi|197695799|gb|EDY42732.1| 50S ribosomal protein L3 [Streptomyces sp. SPB74]
 gi|302428556|gb|EFL00372.1| 50S ribosomal protein L3 [Streptomyces sp. SPB78]
          Length = 214

 Score =  177 bits (449), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 97/210 (46%), Positives = 128/210 (60%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+    C V   RT D +GY +VQ+  GE   + V+K
Sbjct: 7   GILGEKLGMTQVWDDNNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G 
Sbjct: 67  PLKGHFAKADVTPRRHLVEIRTS-DSSEYTLGQEVTAETFESGVKVDVTGKSKGKGFAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +VD
Sbjct: 126 MKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++GL+L+KG VPG      +LVR + K A
Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214


>gi|148982483|ref|ZP_01816779.1| 50S ribosomal protein L3 [Vibrionales bacterium SWAT-3]
 gi|145960448|gb|EDK25827.1| 50S ribosomal protein L3 [Vibrionales bacterium SWAT-3]
          Length = 209

 Score =  177 bits (449), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 95/209 (45%), Positives = 134/209 (64%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT V+  EG  IPVTV+ ++  ++   +TL+ +GY A+QV  G  K   V+K
Sbjct: 3   GLVGRKVGMTRVFTEEGVSIPVTVVEVEANRISQVKTLENDGYAAIQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF GA
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELNVELFNEIKKVDVTGTSKGKGFQGA 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 VKRWNFSTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+L+KG VPG+   + ++V+ + K+
Sbjct: 182 AERNLLLIKGAVPGSTGGN-VIVKPAVKA 209


>gi|33152958|ref|NP_874311.1| 50S ribosomal protein L3 [Haemophilus ducreyi 35000HP]
 gi|42559602|sp|Q7VKD2|RL3_HAEDU RecName: Full=50S ribosomal protein L3
 gi|33149183|gb|AAP96700.1| 50S ribosomal protein L3 [Haemophilus ducreyi 35000HP]
          Length = 208

 Score =  177 bits (448), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/209 (46%), Positives = 134/209 (64%), Gaps = 3/209 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+N +G  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   V+K
Sbjct: 3   GLIGRKVGMTRVFNEDGVSIPVTVIEIEANRVTQVKTLENDGYSAIQVTTGTKKASRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V   + L+EFR + ++    +G   +   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFAGG 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV VD
Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 180

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+LVKG VPGA  NS ++V+ + K+
Sbjct: 181 AERKLLLVKGAVPGA-TNSNVIVKPAVKA 208


>gi|325123604|gb|ADY83127.1| 50S ribosomal protein L3 [Acinetobacter calcoaceticus PHEA-2]
          Length = 212

 Score =  177 bits (448), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 134/213 (62%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+ +D  ++   +TL+ +GY AVQV  GE +   
Sbjct: 1   MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFRV + + +   VG       F VGQ+VDVTG + GKG
Sbjct: 61  VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFAVGQIVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVTV+ LE+
Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VS+D +R +++VKG +PGA     ++VR + K+
Sbjct: 181 VSIDAERSVLVVKGAIPGATGGD-VIVRPTIKA 212


>gi|322515635|ref|ZP_08068613.1| 50S ribosomal protein L3 [Actinobacillus ureae ATCC 25976]
 gi|322118286|gb|EFX90569.1| 50S ribosomal protein L3 [Actinobacillus ureae ATCC 25976]
          Length = 208

 Score =  177 bits (448), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/209 (47%), Positives = 134/209 (64%), Gaps = 3/209 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   V+K
Sbjct: 3   GLVGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDGYSAIQVTTGTKKASRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V   + L+EFR + ++    +G   +   FT  + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINIDIFTDVKKVDVTGTSKGKGFAGG 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV VD
Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 180

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+LVKG VPGA  NS ++V+ + K+
Sbjct: 181 AERKLLLVKGAVPGA-TNSDVIVKPAVKA 208


>gi|330827883|ref|YP_004390835.1| 50S ribosomal protein L3 [Aeromonas veronii B565]
 gi|328803019|gb|AEB48218.1| 50S ribosomal protein L3 [Aeromonas veronii B565]
          Length = 210

 Score =  177 bits (448), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/212 (45%), Positives = 133/212 (62%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+ ++  +V   ++++ +GY A+QV  G  K   
Sbjct: 1   MTIGLVGRKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKSVETDGYNAIQVTTGAKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP  G F+   V   + L+EFR+  + +   VGS          +LVDVTG + GKGF
Sbjct: 61  VTKPEAGHFAKAGVEAGRGLWEFRLN-NGETFTVGSELKVDLLADVKLVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNF     THG S+SHR  GS G  Q PGRVFK KKMAG MG  RVT +NLE+V
Sbjct: 120 AGTVKRHNFRTQDMTHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGHMGAERVTTQNLELV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA  N  ++V+ + K+
Sbjct: 180 RVDAERNLLLIKGAVPGA-TNGNVIVKPAVKA 210


>gi|325954992|ref|YP_004238652.1| 50S ribosomal protein L3 [Weeksella virosa DSM 16922]
 gi|323437610|gb|ADX68074.1| 50S ribosomal protein L3 [Weeksella virosa DSM 16922]
          Length = 209

 Score =  177 bits (448), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 94/206 (45%), Positives = 131/206 (63%), Gaps = 2/206 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+ MT +++  G+ IP T++    C V   RT +K+GY +VQ+G  +AK KN S
Sbjct: 2   SGIIGKKVAMTSLFDENGKNIPCTIIQAGPCVVTQVRTEEKDGYKSVQLGFDDAKEKNTS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
             ++G F     +PK+KL EF   K  D L +G          G+ V VTG + GKGF G
Sbjct: 62  AALKGHFKKAGTTPKRKLVEFYGDKWVDTLNLGDEVKVDLIQEGEYVSVTGTSKGKGFQG 121

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG+ +ATHG     R+ GS G   DP RVFK  +MAGRMGG +VTV+NLEV+ 
Sbjct: 122 VVKRHGFGGVGQATHGQHNRLRAPGSIGAGSDPSRVFKGMRMAGRMGGKQVTVQNLEVLK 181

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           VD ++ L++VKG VPG  KNS+++VR
Sbjct: 182 VDTEQNLLIVKGAVPGP-KNSYVIVR 206


>gi|307543825|ref|YP_003896304.1| 50S ribosomal protein L3 [Halomonas elongata DSM 2581]
 gi|307215849|emb|CBV41119.1| 50S ribosomal protein L3 [Halomonas elongata DSM 2581]
          Length = 212

 Score =  177 bits (448), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/212 (45%), Positives = 134/212 (63%), Gaps = 1/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V +K GMT V+  +G  +PVTV+ ++  +V   ++++ +GY AVQV  G  K K+
Sbjct: 1   MTIGLVGKKAGMTRVFTEDGASVPVTVIEVEPNRVTRVKSVESDGYAAVQVTTGSRKAKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SK   G F+   V   + L EFR+ +  +   VG   + S F  GQ VDVTG + GKG+
Sbjct: 61  LSKAQAGEFAKAGVEAGRSLMEFRLDEGAEAPEVGGELTVSLFEAGQRVDVTGTSKGKGY 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR NF     +HG S++HR+ GS G  Q PGRVFK KKMAG+MG  R TV+ LEVV
Sbjct: 121 QGAVKRWNFRTQDNSHGNSLAHRAPGSIGMCQTPGRVFKGKKMAGQMGNARCTVQTLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA   S ++VR + K+
Sbjct: 181 RVDAERNLLLIKGAVPGA-TGSDVIVRSAVKA 211


>gi|254391393|ref|ZP_05006596.1| 50S ribosomal protein L3 [Streptomyces clavuligerus ATCC 27064]
 gi|294814467|ref|ZP_06773110.1| 50S ribosomal protein L3 [Streptomyces clavuligerus ATCC 27064]
 gi|326442856|ref|ZP_08217590.1| 50S ribosomal protein L3 [Streptomyces clavuligerus ATCC 27064]
 gi|197705083|gb|EDY50895.1| 50S ribosomal protein L3 [Streptomyces clavuligerus ATCC 27064]
 gi|294327066|gb|EFG08709.1| 50S ribosomal protein L3 [Streptomyces clavuligerus ATCC 27064]
          Length = 214

 Score =  177 bits (448), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/210 (46%), Positives = 129/210 (61%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+  KLGMT V++   R +PVTV+    C V   RT D +GY +VQ+  GE   + V+K
Sbjct: 7   GVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDVDGYESVQIAFGEIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+  +V+P++ L E R   D     +G   + + F  G  VDVTG + GKGF+G 
Sbjct: 67  PLKGHFAKADVTPRRHLVELRTS-DASEYTLGQEITAAVFESGVKVDVTGKSKGKGFAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +VD
Sbjct: 126 MKRHNFRGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++GL+L+KG VPG      +LVR + K A
Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214


>gi|262280225|ref|ZP_06058009.1| 50S ribosomal protein L3 [Acinetobacter calcoaceticus RUH2202]
 gi|262258003|gb|EEY76737.1| 50S ribosomal protein L3 [Acinetobacter calcoaceticus RUH2202]
          Length = 214

 Score =  177 bits (448), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+ +D  ++   +TL+ +GY AVQV  GE +   
Sbjct: 3   MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 62

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFRV + + +   VG       FTVGQ+VDVTG + GKG
Sbjct: 63  VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQVVDVTGQSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVTV+ LE+
Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VS+D +R +++VKG +PG+     ++VR + K+
Sbjct: 183 VSIDAERSVLVVKGAIPGSTGGD-VIVRPTIKA 214


>gi|309812372|ref|ZP_07706127.1| 50S ribosomal protein L3 [Dermacoccus sp. Ellin185]
 gi|308433677|gb|EFP57554.1| 50S ribosomal protein L3 [Dermacoccus sp. Ellin185]
          Length = 210

 Score =  176 bits (447), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 94/210 (44%), Positives = 129/210 (61%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++ + R IPVTV+ +  C V   R+   +GY AVQ+G G+   + V+K
Sbjct: 3   GLLGEKLGMTQVWDADNRLIPVTVVAVGPCVVTQLRSEGVDGYNAVQIGYGQIDPRKVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+P++ L E R   D     +G   +   F  GQ VDV G T GKGF+G 
Sbjct: 63  PLTGHFEKAGVTPRRHLAELRTS-DAGEYSLGQELTAEAFEAGQKVDVVGRTKGKGFAGV 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G+ A+HG   +HR  GS G    PGRVFK  +MAGRMGG R T +NL++ +VD
Sbjct: 122 MKRHGFAGVSASHGAHRNHRKPGSIGGCATPGRVFKGMRMAGRMGGVRQTTQNLQIHAVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++GL+L+KG VPG    + +LVR + K A
Sbjct: 182 AEKGLLLIKGAVPG-PAGAVVLVRTAIKGA 210


>gi|291544460|emb|CBL17569.1| LSU ribosomal protein L3P [Ruminococcus sp. 18P13]
          Length = 211

 Score =  176 bits (447), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 93/213 (43%), Positives = 134/213 (62%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M+ G++ +K+GMT +++ E G+ IPVTV+    C VV  +T++ +GY A+Q+G  + K +
Sbjct: 1   MQKGIIGKKIGMTQIFDQEAGKVIPVTVVEAGPCVVVQKKTVENDGYAALQIGFDDVKAQ 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++KPM+G F    V  K+ L EFR+  D D L VG +     F VG +VDV+G + GKG
Sbjct: 61  RINKPMKGHFDKSEVGYKRVLKEFRLD-DCDALNVGDLLKADTFAVGDIVDVSGTSKGKG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+GA+KRHN   L+ THG    HR  GS G    P R++K K MAG MG  +VTV+NLEV
Sbjct: 120 FTGAIKRHNQHRLKETHGTGPVHRQAGSMGACSSPSRIYKGKGMAGHMGAEKVTVQNLEV 179

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V +D +  LI +KG +PG  K   + + DS K+
Sbjct: 180 VKIDVENNLIALKGAIPGP-KGGVVCITDSVKA 211


>gi|34499641|ref|NP_903856.1| 50S ribosomal protein L3 [Chromobacterium violaceum ATCC 12472]
 gi|42559595|sp|Q7NQF2|RL3_CHRVO RecName: Full=50S ribosomal protein L3
 gi|34105491|gb|AAQ61846.1| 50S ribosomal protein L3 [Chromobacterium violaceum ATCC 12472]
          Length = 214

 Score =  176 bits (447), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/214 (48%), Positives = 133/214 (62%), Gaps = 4/214 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTVL + + +V   +T + +GY AVQV  G  K   
Sbjct: 1   MSLGLVGRKVGMTRIFAEDGATIPVTVLDMSSNRVTQIKTAETDGYNAVQVTYGSKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD--DDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           V+K   G F+   V     L EF +  D   +  P G   +   FTVGQLVDVTG + GK
Sbjct: 61  VNKADAGHFAKAGVEAGLGLAEFALSADALSNFKP-GDAIAVEIFTVGQLVDVTGTSKGK 119

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GFSG +KRHNF   RA+HG S SH + GS G  QDPGRVF  K+MAG+ G  + TV+ LE
Sbjct: 120 GFSGVIKRHNFSSNRASHGNSRSHNTPGSIGQAQDPGRVFPGKRMAGQYGNVKSTVQCLE 179

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +V VD +R LILVKG VPGA KN  ++VR S K+
Sbjct: 180 IVRVDAERQLILVKGAVPGA-KNGDVVVRPSVKA 212


>gi|20808660|ref|NP_623831.1| 50S ribosomal protein L3 [Thermoanaerobacter tengcongensis MB4]
 gi|42559656|sp|Q8R7V4|RL3_THETN RecName: Full=50S ribosomal protein L3
 gi|20517294|gb|AAM25435.1| Ribosomal protein L3 [Thermoanaerobacter tengcongensis MB4]
          Length = 210

 Score =  176 bits (447), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/214 (46%), Positives = 137/214 (64%), Gaps = 7/214 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +K GMT +++ +G  IPVTV+    C VV  +T++K+GY A+QVG G+   K 
Sbjct: 1   MKKGILGKKHGMTQIFDEKGEVIPVTVIEAGPCVVVQKKTVEKDGYNAIQVGFGDVSEKK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           ++KP+ G F    VSPK+ L EFR+   DD+    VG+      F  G  VDVTG++ GK
Sbjct: 61  LNKPLLGHFKKAGVSPKRYLREFRL---DDISGYEVGTEIKVDIFKPGDRVDVTGISKGK 117

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF+G +KR+       +HG S  HR  GS G   DPGR FK KKM GRMG +RVT++NLE
Sbjct: 118 GFAGVIKRYGARRGPMSHG-SKYHRRVGSMGATTDPGRTFKGKKMPGRMGSDRVTIQNLE 176

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VV VD +  L++VKG VPG  K S +++RDS KS
Sbjct: 177 VVKVDPELNLLVVKGSVPGP-KGSLLIIRDSVKS 209


>gi|256825886|ref|YP_003149846.1| 50S ribosomal protein L3P [Kytococcus sedentarius DSM 20547]
 gi|256689279|gb|ACV07081.1| LSU ribosomal protein L3P [Kytococcus sedentarius DSM 20547]
          Length = 219

 Score =  176 bits (447), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 94/211 (44%), Positives = 128/211 (60%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           +GV+  KLGMT V++ + R +PVTV+ +    V   RT D +GY AVQ+  G+   + VS
Sbjct: 11  AGVLGTKLGMTQVWDEDNRLVPVTVVQVAPNVVTQIRTQDTDGYGAVQIATGDIDPRKVS 70

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
            P+RG F    V+P++ + E R   D     +G   +   F  G  VDVTG T GKGF+G
Sbjct: 71  NPLRGHFEKAGVTPRRHVTELRT-ADSGSYELGQELTVETFENGATVDVTGTTKGKGFAG 129

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    PGRVF+  +MAGRMGG R T +NL + +V
Sbjct: 130 VMKRHGFAGVSASHGAHRNHRKPGSIGGCATPGRVFRGTRMAGRMGGERQTTQNLTIHAV 189

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D  +GL+L+KG VPGA +   +LVR + K A
Sbjct: 190 DADKGLLLIKGAVPGA-RGGLVLVRSAAKGA 219


>gi|328768339|gb|EGF78386.1| hypothetical protein BATDEDRAFT_13292 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 279

 Score =  176 bits (447), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/211 (48%), Positives = 133/211 (63%), Gaps = 3/211 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA-GEAKVKN 60
           R+G+VA K GMT +++  G+ +PVTVL + NCQV+  R    +G   V+VGA  + +   
Sbjct: 19  RTGLVALKKGMTSIFDEWGQMVPVTVLEVSNCQVIRTRFHAGSGKHMVEVGAVSQRRSYR 78

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + +     F    VSPKKK+ EF V   D  +P G     S+F  GQ VDV G T+GKGF
Sbjct: 79  LHRAQLFHFRKYQVSPKKKITEFDVT-PDACIPSGVRLFASHFVAGQYVDVQGKTMGKGF 137

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G MKR  FGG  A+HGVSISHRS GS G  QDPG+V+K KKM GRMGG   T +NL+V+
Sbjct: 138 QGVMKRWGFGGQPASHGVSISHRSLGSIGQCQDPGKVWKGKKMPGRMGGVNRTTQNLKVI 197

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +D++  LI VKG VPG  +N ++ V DS K
Sbjct: 198 KIDNQYNLIYVKGGVPGP-ENGYLRVTDSIK 227


>gi|89076770|ref|ZP_01163043.1| 50S ribosomal protein L3 [Photobacterium sp. SKA34]
 gi|90581758|ref|ZP_01237542.1| 50S ribosomal protein L3 [Vibrio angustum S14]
 gi|89047583|gb|EAR53197.1| 50S ribosomal protein L3 [Photobacterium sp. SKA34]
 gi|90437056|gb|EAS62263.1| 50S ribosomal protein L3 [Vibrio angustum S14]
          Length = 209

 Score =  176 bits (447), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 92/195 (47%), Positives = 128/195 (65%), Gaps = 1/195 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT ++  +G  IPVTV+ ++N +V   ++++ +GY A+QV AG  K   VSK
Sbjct: 3   GLIGRKVGMTRIFTEDGISIPVTVVEVENNRVTQVKSVETDGYNAIQVTAGTKKASRVSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF GA
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLENSEEF-AVGAELNVELFNDIKKVDVTGTSKGKGFQGA 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKRGLILVKGCVPGA 198
            +R L+L+KG VPG+
Sbjct: 182 AERNLLLIKGAVPGS 196


>gi|332139848|ref|YP_004425586.1| 50S ribosomal protein L3 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|332139861|ref|YP_004425599.1| 50S ribosomal protein L3 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|226725125|sp|B4RZN2|RL3_ALTMD RecName: Full=50S ribosomal protein L3
 gi|327549870|gb|AEA96588.1| 50S ribosomal protein L3 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327549883|gb|AEA96601.1| 50S ribosomal protein L3 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 212

 Score =  176 bits (447), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+     +V   RT + +GY A+QV AG  K   
Sbjct: 1   MAIGLVGRKVGMTRIFTEDGTSIPVTVIEATPNRVTQLRTEESDGYRALQVTAGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++K   G F+   V   + L EFR+++++   + VGS  +   F   + +DVTG + GKG
Sbjct: 61  INKAEAGHFAKAGVEAGRTLVEFRLEENEGADIEVGSEITVEIFNDTKKIDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F GA+KR NF   R THG S+SHR+ GS G  Q PG+VFK KKMAG++G  +VT ++LEV
Sbjct: 121 FQGAIKRWNFSSQRMTHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQLGNKQVTTQSLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD + GLILVKG VPGA  N  ++V+ + K+
Sbjct: 181 VRVDVENGLILVKGAVPGATGND-VIVKPAVKA 212


>gi|226953871|ref|ZP_03824335.1| 50S ribosomal protein L3 [Acinetobacter sp. ATCC 27244]
 gi|294651634|ref|ZP_06728938.1| 50S ribosomal protein L3 [Acinetobacter haemolyticus ATCC 19194]
 gi|226835354|gb|EEH67737.1| 50S ribosomal protein L3 [Acinetobacter sp. ATCC 27244]
 gi|292822483|gb|EFF81382.1| 50S ribosomal protein L3 [Acinetobacter haemolyticus ATCC 19194]
          Length = 214

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT V+   G  +PVTV+ +D  ++   +TL+ +GY A+QV  GE +   
Sbjct: 3   MAIGLVGRKCGMTRVFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAIQVTTGERRESR 62

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFRV + + +   VG       FTVGQ+VDVTG + GKG
Sbjct: 63  VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGSIGVDLFTVGQIVDVTGQSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVTV+ LE+
Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VS+D +R +++VKG +PG+     ++VR + K+
Sbjct: 183 VSIDAERSVLVVKGAIPGSTGGD-VIVRPTIKA 214


>gi|297192703|ref|ZP_06910101.1| 50S ribosomal protein L3 [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197721642|gb|EDY65550.1| 50S ribosomal protein L3 [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 214

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/210 (46%), Positives = 128/210 (60%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+  KLGMT V++   R +PVTV+    C V   RT D +GY +VQ+  GE   + V+K
Sbjct: 7   GVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDIDGYESVQIAFGEIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G 
Sbjct: 67  PLKGHFAKADVTPRRHLVELRT-PDASEYTLGQEITAEVFESGVKVDVTGKSKGKGFAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +VD
Sbjct: 126 MKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++GL+L+KG VPG      +LVR + K A
Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214


>gi|27364215|ref|NP_759743.1| 50S ribosomal protein L3 [Vibrio vulnificus CMCP6]
 gi|320157601|ref|YP_004189980.1| 50S ribosomal protein L3p (L3e) [Vibrio vulnificus MO6-24/O]
 gi|42559633|sp|Q8DE39|RL3_VIBVU RecName: Full=50S ribosomal protein L3
 gi|27360333|gb|AAO09270.1| LSU ribosomal protein L3p (L3e) [Vibrio vulnificus CMCP6]
 gi|319932913|gb|ADV87777.1| LSU ribosomal protein L3p (L3e) [Vibrio vulnificus MO6-24/O]
          Length = 209

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/209 (45%), Positives = 133/209 (63%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+  EG  IPVTV+ ++  +V   +TL+ +GY A+QV AG  K   V+K
Sbjct: 3   GLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVAQVKTLETDGYAAIQVTAGTKKANRVNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
              G F+   V   + L+EFR++  ++   VGS  +   F   + VDVTG + GKGF G 
Sbjct: 63  AEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|78064924|ref|YP_367693.1| 50S ribosomal protein L3 [Burkholderia sp. 383]
 gi|109893416|sp|Q39KG7|RL3_BURS3 RecName: Full=50S ribosomal protein L3
 gi|77965669|gb|ABB07049.1| LSU ribosomal protein L3P [Burkholderia sp. 383]
          Length = 217

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/200 (47%), Positives = 125/200 (62%), Gaps = 1/200 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 2   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR+       L  G+V     F VGQ VDV G++IGKG
Sbjct: 62  VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGVDLFEVGQKVDVQGVSIGKG 121

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RATHG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 122 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 181

Query: 180 VSVDDKRGLILVKGCVPGAK 199
             +D +R L+LVKG +PGAK
Sbjct: 182 ARIDAERKLLLVKGAIPGAK 201


>gi|32035713|ref|ZP_00135594.1| COG0087: Ribosomal protein L3 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126209224|ref|YP_001054449.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae L20]
 gi|165977196|ref|YP_001652789.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|190151114|ref|YP_001969639.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|303250012|ref|ZP_07336214.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|303253186|ref|ZP_07339335.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307246689|ref|ZP_07528759.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307248831|ref|ZP_07530844.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|307251058|ref|ZP_07532982.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|307253444|ref|ZP_07535315.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307255674|ref|ZP_07537478.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307257857|ref|ZP_07539614.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|307260126|ref|ZP_07541836.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|307262255|ref|ZP_07543904.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|307264464|ref|ZP_07546049.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|166233111|sp|A3N358|RL3_ACTP2 RecName: Full=50S ribosomal protein L3
 gi|226725121|sp|B3GZ11|RL3_ACTP7 RecName: Full=50S ribosomal protein L3
 gi|226725122|sp|B0BST1|RL3_ACTPJ RecName: Full=50S ribosomal protein L3
 gi|126098016|gb|ABN74844.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar
           5b str. L20]
 gi|165877297|gb|ABY70345.1| ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|189916245|gb|ACE62497.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|302647868|gb|EFL78075.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|302651075|gb|EFL81229.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306852389|gb|EFM84624.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306854758|gb|EFM86948.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|306856888|gb|EFM89020.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306859123|gb|EFM91165.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306861351|gb|EFM93341.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306863763|gb|EFM95689.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306865772|gb|EFM97650.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306868018|gb|EFM99845.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|306870161|gb|EFN01920.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 208

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/209 (47%), Positives = 133/209 (63%), Gaps = 3/209 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   V+K
Sbjct: 3   GLVGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDGYSAIQVTTGSKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V   + L+EFR + ++    +G   +   FT  + VDVTG + GKGF G 
Sbjct: 63  PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFTDVKKVDVTGTSKGKGFQGG 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV VD
Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 180

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+LVKG VPGA  NS ++V+ + K+
Sbjct: 181 AERKLLLVKGAVPGA-TNSDVIVKPAVKA 208


>gi|260770913|ref|ZP_05879842.1| LSU ribosomal protein L3p (L3e) [Vibrio furnissii CIP 102972]
 gi|260614150|gb|EEX39340.1| LSU ribosomal protein L3p (L3e) [Vibrio furnissii CIP 102972]
 gi|315178959|gb|ADT85873.1| 50S ribosomal protein L3 [Vibrio furnissii NCTC 11218]
          Length = 209

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/209 (45%), Positives = 134/209 (64%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY A+QV AG  K   V+K
Sbjct: 3   GLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
              G F+   V   + L+EFR++  ++   VGS  +   F   + VDVTG + GKGF GA
Sbjct: 63  AEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGSELTVELFNETKKVDVTGTSKGKGFQGA 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|239995000|ref|ZP_04715524.1| 50S ribosomal subunit protein L3 [Alteromonas macleodii ATCC 27126]
          Length = 212

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+     +V   RT + +GY A+QV AG  K   
Sbjct: 1   MAIGLVGRKVGMTRIFTEDGTSIPVTVIEATPNRVTQLRTEETDGYRALQVTAGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++K   G F+   V   + L EFR+++++   + VGS  +   F   + +DVTG + GKG
Sbjct: 61  INKAEAGHFAKAGVEAGRTLVEFRLEENEGADIEVGSEITVEIFNDTKKIDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F GA+KR NF   R THG S+SHR+ GS G  Q PG+VFK KKMAG++G  +VT ++LEV
Sbjct: 121 FQGAIKRWNFSSQRMTHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQLGNKQVTTQSLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD + GLILVKG VPGA  N  ++V+ + K+
Sbjct: 181 VRVDVENGLILVKGAVPGATGND-VIVKPAVKA 212


>gi|113460208|ref|YP_718265.1| 50S ribosomal protein L3 [Haemophilus somnus 129PT]
 gi|170718246|ref|YP_001785266.1| 50S ribosomal protein L3 [Haemophilus somnus 2336]
 gi|122945127|sp|Q0I163|RL3_HAES1 RecName: Full=50S ribosomal protein L3
 gi|189042848|sp|B0UX13|RL3_HAES2 RecName: Full=50S ribosomal protein L3
 gi|112822251|gb|ABI24340.1| LSU ribosomal protein L3P [Haemophilus somnus 129PT]
 gi|168826375|gb|ACA31746.1| ribosomal protein L3 [Haemophilus somnus 2336]
          Length = 208

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/209 (47%), Positives = 134/209 (64%), Gaps = 3/209 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT ++N +G  IPVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+K
Sbjct: 3   GLVGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTLENDGYTAVQVTTGFKKASRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V   + L+EFR + ++    +G   +   FT  + VDVTG + GKGF G 
Sbjct: 63  PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFTDVKKVDVTGTSKGKGFQGG 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LE+V VD
Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEIVRVD 180

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+LVKG VPGA  NS ++V+ + K+
Sbjct: 181 VERKLLLVKGSVPGA-TNSDVIVKPAVKA 208


>gi|317401537|gb|EFV82166.1| 50S ribosomal protein L3 [Achromobacter xylosoxidans C54]
          Length = 229

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/213 (46%), Positives = 131/213 (61%), Gaps = 3/213 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+V RK+GMT ++  EG  IPVTVL + N +V   ++L+ +GY A+QV  G  +   V
Sbjct: 12  RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQVKSLETDGYAAIQVAYGTRRASRV 71

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFS-PSYFTVGQLVDVTGMTIGKG 119
            +   G ++         L EFR+          G+V +  S F  GQ VDVTG TIGKG
Sbjct: 72  PQAQTGHYAKAGAEAGSILKEFRLDPARAAEFSAGAVIAVESVFEAGQQVDVTGTTIGKG 131

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRHNFG  RA+HG S SHR  GS G  QDPGR+F  K+MAG +G    TV+NL+V
Sbjct: 132 FAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMAGHLGDVTRTVQNLDV 191

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +RGL+LVKG VPG    + I+VR + K+
Sbjct: 192 VRVDVERGLLLVKGAVPG-HAGADIVVRPAIKA 223


>gi|190571546|ref|YP_001975904.1| ribosomal protein L3 [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|190357818|emb|CAQ55274.1| ribosomal protein L3 [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 240

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/217 (45%), Positives = 144/217 (66%), Gaps = 10/217 (4%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++   +G T +Y  +  R+ VT+LHL    ++  +  DK GY +V +G G+  +K +
Sbjct: 9   RIGLLMTNVGHTAMY-FDNSRMAVTLLHLSETYIIDIKGQDKCGYNSVILGTGD--LKKI 65

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPV--GSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP   +     ++ K KL+E R+    DL  +  G     ++F VGQ +D+TG ++GKG
Sbjct: 66  AKPQLEYLKKKGINSKCKLYESRLT---DLFGIECGKKVGVNHFVVGQYLDITGYSLGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKRHNF GLRA+HGVSI+HRS GSTG  QDPGRVFK KKMAG +G +RVTV+N+++
Sbjct: 123 FAGVMKRHNFSGLRASHGVSIAHRSQGSTGQCQDPGRVFKGKKMAGHLGNSRVTVQNMKI 182

Query: 180 VSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVN 215
           +S+D +  +I VKG  VPG  KNS++ VRD+ K  ++
Sbjct: 183 LSIDYENSIIAVKGNNVPGF-KNSYVFVRDAVKKPLH 218


>gi|255659503|ref|ZP_05404912.1| 50S ribosomal protein L3 [Mitsuokella multacida DSM 20544]
 gi|260848055|gb|EEX68062.1| 50S ribosomal protein L3 [Mitsuokella multacida DSM 20544]
          Length = 214

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/217 (46%), Positives = 136/217 (62%), Gaps = 5/217 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ RKLGMT ++  EG+ +PVTV+   N  V+ ++T++ +GY AVQ+G GE K   
Sbjct: 1   MSKAILGRKLGMTQIFTEEGKVVPVTVVESGNNVVIQNKTVESDGYNAVQLGFGEVKENK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F    VSP K + E R+  D     VG       F+ G+LVDVTG + GKGF
Sbjct: 61  VNKPLKGHFEKAGVSPVKFIREMRLA-DASEYKVGDTIGVDIFSAGELVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCR-QDP-GRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KRHNF      HG S SHR  GSTG     P GRV K KK+ GRMGG RVTV+ L 
Sbjct: 120 AGGIKRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLT 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           VV VD  R LIL+KG +PG KK S+++++++ K   N
Sbjct: 179 VVRVDADRNLILIKGAIPGPKK-SFVVIKNTVKPGKN 214


>gi|52426103|ref|YP_089240.1| 50S ribosomal protein L3 [Mannheimia succiniciproducens MBEL55E]
 gi|81825476|sp|Q65QV5|RL3_MANSM RecName: Full=50S ribosomal protein L3
 gi|52308155|gb|AAU38655.1| RplC protein [Mannheimia succiniciproducens MBEL55E]
          Length = 208

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/209 (47%), Positives = 132/209 (63%), Gaps = 3/209 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT ++  EG  IPVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+K
Sbjct: 3   GLVGRKVGMTRIFTEEGVSIPVTVIEIEANRVTQVKTLENDGYSAVQVTTGSKKASRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V   + L+EFR + ++    +G   +   F   + VDVTG + GKGF G 
Sbjct: 63  PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQGG 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV VD
Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 180

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+LVKG VPGA  NS ++V+ + K+
Sbjct: 181 AERKLLLVKGAVPGA-TNSDVIVKPAVKA 208


>gi|289641166|ref|ZP_06473334.1| ribosomal protein L3 [Frankia symbiont of Datisca glomerata]
 gi|289509107|gb|EFD30038.1| ribosomal protein L3 [Frankia symbiont of Datisca glomerata]
          Length = 244

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 97/208 (46%), Positives = 125/208 (60%), Gaps = 2/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R IPVTV+      V   RT D++GY AVQ+G GE   + V++
Sbjct: 8   GLLGTKLGMTQVWDANNRVIPVTVIKAGPNVVTQVRTSDRDGYSAVQLGYGEIDPRRVTQ 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+RG F+   V P++ L E R     +  P G   +   F+ G +VDVTG + GKGF+G 
Sbjct: 68  PLRGHFARAGVPPRRHLVELRTADATNYRP-GQELTGEIFSAGSIVDVTGTSKGKGFAGV 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GL A HGV   HRS GS G    PGRVFK  +MAGRMG  RVT   L + +VD
Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGHERVTTAGLTIHAVD 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +RG +LVKG VPG      +LVR + K
Sbjct: 187 TERGFLLVKGAVPG-PDGGLVLVRSAAK 213


>gi|256390140|ref|YP_003111704.1| 50S ribosomal protein L3 [Catenulispora acidiphila DSM 44928]
 gi|256356366|gb|ACU69863.1| ribosomal protein L3 [Catenulispora acidiphila DSM 44928]
          Length = 215

 Score =  176 bits (446), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/208 (47%), Positives = 125/208 (60%), Gaps = 2/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+  KLGMT V++   R +PVTV+    C V   R  + +GY AVQ+  G  K   V+K
Sbjct: 7   GVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQIRKQEIDGYEAVQIAYGAVKPTKVTK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V+P++   E R   D     +G   +   FT GQ+VDV+G + G GF+G 
Sbjct: 67  PEAGHFAKAGVTPRRYTVEIRT-TDAAEYSLGQEITAETFTQGQIVDVSGTSKGHGFAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF GL A HGV   HRS GS G    PGRVFK  +MAGRMG  RVTV+NL V +VD
Sbjct: 126 MKRHNFKGLGAGHGVQRKHRSPGSIGACATPGRVFKGVRMAGRMGSARVTVQNLTVQAVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            ++GLILVKG +PG      +LV+ S K
Sbjct: 186 AEKGLILVKGAIPGP-NGGLVLVKTSVK 212


>gi|331005012|ref|ZP_08328419.1| LSU ribosomal protein L3p (L3e) [gamma proteobacterium IMCC1989]
 gi|330421178|gb|EGG95437.1| LSU ribosomal protein L3p (L3e) [gamma proteobacterium IMCC1989]
          Length = 212

 Score =  176 bits (446), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/211 (46%), Positives = 130/211 (61%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++  +G  IPVTV+ +D  ++   ++ + +GY AVQV  G  K   
Sbjct: 1   MTIGLVGRKSGMTRIFAEDGASIPVTVIEVDPNRITQIKSTEVDGYNAVQVTVGSRKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK   G FS  N    + ++E R     +   VG   + + F VGQ VDVTG + GKGF
Sbjct: 61  VSKSAAGHFSKANTEAGRGVWELR-NDAKEAFEVGGEITVAAFEVGQKVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF    ATHG S+SHR+ GS G  Q PGRVFKNKKMAG MG  +VTV+ LEVV
Sbjct: 120 AGGVKRWNFAMQDATHGNSLSHRAPGSIGQCQTPGRVFKNKKMAGHMGAEQVTVQTLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L+L+KG VPGA     ++VR + K
Sbjct: 180 RVDSERNLLLIKGAVPGAPGGD-VIVRPATK 209


>gi|170731682|ref|YP_001763629.1| 50S ribosomal protein L3 [Burkholderia cenocepacia MC0-3]
 gi|206558641|ref|YP_002229401.1| 50S ribosomal protein L3 [Burkholderia cenocepacia J2315]
 gi|212288250|sp|B1JU22|RL3_BURCC RecName: Full=50S ribosomal protein L3
 gi|212288251|sp|B4E5C0|RL3_BURCJ RecName: Full=50S ribosomal protein L3
 gi|169814924|gb|ACA89507.1| ribosomal protein L3 [Burkholderia cenocepacia MC0-3]
 gi|198034678|emb|CAR50545.1| 50S ribosomal protein L3 [Burkholderia cenocepacia J2315]
          Length = 216

 Score =  176 bits (446), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/200 (47%), Positives = 125/200 (62%), Gaps = 1/200 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR+       L  G+V     F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGADLFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RATHG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 121 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAK 199
             +D +R L+LVKG +PGAK
Sbjct: 181 ARIDAERKLLLVKGAIPGAK 200


>gi|317050528|ref|YP_004111644.1| 50S ribosomal protein L3 [Desulfurispirillum indicum S5]
 gi|316945612|gb|ADU65088.1| 50S ribosomal protein L3 [Desulfurispirillum indicum S5]
          Length = 209

 Score =  176 bits (446), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/196 (50%), Positives = 126/196 (64%), Gaps = 3/196 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEA-KVKNVSK 63
           ++ +K+GMT ++  +G  IPVTV+    C VV  +T+D +GY AVQVG  EA K K VSK
Sbjct: 4   LIGKKIGMTQIFCEDGTVIPVTVVEAGPCTVVQVKTVDSDGYAAVQVGFEEALKEKRVSK 63

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+   V+P++ L EFRV+ D     VG   +   F  G  +DVTG + GKGF G 
Sbjct: 64  PLKGHFAKSGVAPQRHLKEFRVE-DPAGFSVGQQLTAEVFAAGDKIDVTGTSKGKGFQGV 122

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KRH FGG RATHG S  HR+ GS G    P R FKNKKM GRMGG   TV+ LEVV V 
Sbjct: 123 IKRHGFGGGRATHG-STFHRAPGSIGMCATPSRTFKNKKMPGRMGGKTTTVQCLEVVKVM 181

Query: 184 DKRGLILVKGCVPGAK 199
             + L+LVKG +PG+K
Sbjct: 182 ADQNLLLVKGAIPGSK 197


>gi|255319815|ref|ZP_05361020.1| 50S ribosomal protein L3 [Acinetobacter radioresistens SK82]
 gi|262380348|ref|ZP_06073502.1| 50S ribosomal protein L3 [Acinetobacter radioresistens SH164]
 gi|255303134|gb|EET82346.1| 50S ribosomal protein L3 [Acinetobacter radioresistens SK82]
 gi|262297794|gb|EEY85709.1| 50S ribosomal protein L3 [Acinetobacter radioresistens SH164]
          Length = 212

 Score =  176 bits (446), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 95/213 (44%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+ +D  ++   +TL+ +GY A+QV  GE +   
Sbjct: 1   MAIGLVGRKCGMTRIFTEAGVSVPVTVIEVDPNRITQIKTLETDGYQAIQVTTGERRESR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFRV + + +   VG+      F VGQ+VDVTG + GKG
Sbjct: 61  VTNGQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGASIGVDLFAVGQIVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVTV+ LE+
Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VS+D +R +++VKG +PGA     ++VR + K+
Sbjct: 181 VSIDAERSVLVVKGAIPGATGGD-VIVRPTIKA 212


>gi|262373521|ref|ZP_06066799.1| 50S ribosomal protein L3 [Acinetobacter junii SH205]
 gi|262311274|gb|EEY92360.1| 50S ribosomal protein L3 [Acinetobacter junii SH205]
          Length = 214

 Score =  176 bits (446), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 95/213 (44%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+ +D  ++   +TL+ +GY A+QV  GE +   
Sbjct: 3   MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAIQVTTGERRESR 62

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFRV + + +   VG       FTVGQ+VDVTG + GKG
Sbjct: 63  VTSAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGSIGVDLFTVGQIVDVTGQSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVTV+ LE+
Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VS+D +R +++VKG +PG+     ++VR + K+
Sbjct: 183 VSIDAERSVLVVKGAIPGSTGGD-VIVRPTIKA 214


>gi|319778743|ref|YP_004129656.1| LSU ribosomal protein L3p (L3e) [Taylorella equigenitalis MCE9]
 gi|317108767|gb|ADU91513.1| LSU ribosomal protein L3p (L3e) [Taylorella equigenitalis MCE9]
          Length = 233

 Score =  176 bits (446), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ RK+GM  ++  EG  IPVTVL + N +V   ++++ +GY AVQV  G  +   V
Sbjct: 16  RLGLLGRKVGMMRIFTDEGESIPVTVLDVSNNRVTQVKSVETDGYAAVQVAYGTRRASRV 75

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFS-PSYFTVGQLVDVTGMTIGKG 119
           +K   G ++   V     L EFR+          GSV +  S F VGQ VDV G TIGKG
Sbjct: 76  NKAQTGHYAKAGVEAGSILKEFRLDPAKAAEFSAGSVVAVDSVFQVGQKVDVQGTTIGKG 135

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRHNFG  RA+HG S SHR  GS G  QDPGR+F  K+M+G MG    TV+NL++
Sbjct: 136 FAGTIKRHNFGAQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMSGHMGDVTRTVQNLDI 195

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +RGL+LVKG VPG  KNS I+V  + K
Sbjct: 196 VRVDAERGLLLVKGAVPG-HKNSDIVVLPAIK 226


>gi|90415162|ref|ZP_01223111.1| 50S ribosomal protein L3 [Photobacterium profundum 3TCK]
 gi|90323709|gb|EAS40341.1| 50S ribosomal protein L3 [Photobacterium profundum 3TCK]
          Length = 209

 Score =  176 bits (446), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 91/195 (46%), Positives = 126/195 (64%), Gaps = 1/195 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT ++  EG  IPVTV+ ++  +V   ++L+ +GY A+Q+  G  K   VSK
Sbjct: 3   GLIGRKVGMTRIFTEEGISIPVTVVEVEANRVTQVKSLETDGYNAIQITTGTKKANRVSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF GA
Sbjct: 63  PAAGHFAKAGVEAGRGLWEFRLENGEEFT-VGAELNVELFNEVKKVDVTGTSKGKGFQGA 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 IKRWNFSTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKRGLILVKGCVPGA 198
            +R L+L+KG VPG+
Sbjct: 182 AERNLLLIKGAVPGS 196


>gi|257454047|ref|ZP_05619321.1| 50S ribosomal protein L3 [Enhydrobacter aerosaccus SK60]
 gi|257448525|gb|EEV23494.1| 50S ribosomal protein L3 [Enhydrobacter aerosaccus SK60]
          Length = 212

 Score =  176 bits (446), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/214 (44%), Positives = 134/214 (62%), Gaps = 4/214 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V +K GMT ++   G  IPVTV+ +   ++   +T D +GY A+QV  GE +   
Sbjct: 1   MAIGLVGKKCGMTRIFTEAGVSIPVTVVEVTANRISQIKTQDTDGYQAIQVTTGERRDSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLL--PVGSVFSPSYFTVGQLVDVTGMTIGK 118
           V+   +G F+   V+  +  +EFRV+ D +L     GS  +   F VGQ+VDV G + GK
Sbjct: 61  VNAAQKGHFAKAGVAAGRGTWEFRVE-DSELEGREAGSEIAADLFQVGQIVDVIGTSKGK 119

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G +KRHNF     THG S+SHR  GSTG  Q PGRVFK KKM G+MG  RVTV+ LE
Sbjct: 120 GFQGGIKRHNFRSQDWTHGNSVSHRVVGSTGQNQTPGRVFKGKKMPGQMGNKRVTVQGLE 179

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V+SVD ++G++++KG +PGA     ++VR S K+
Sbjct: 180 VISVDAEKGILVIKGAIPGANGGD-VIVRPSVKA 212


>gi|317049840|ref|YP_004117488.1| 50S ribosomal protein L3 [Pantoea sp. At-9b]
 gi|316951457|gb|ADU70932.1| 50S ribosomal protein L3 [Pantoea sp. At-9b]
          Length = 208

 Score =  176 bits (446), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 95/203 (46%), Positives = 130/203 (64%), Gaps = 2/203 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG+V +K+GMT ++  +G  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   V+
Sbjct: 2   SGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKTLENDGYQAIQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR + ++    VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRTEGEE--YSVGQNISVEIFAEVKKVDVTGTSKGKGFAG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++LEVV V
Sbjct: 120 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLEVVRV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205
           D +R L+LVKG VPGA  +  I+
Sbjct: 180 DAERNLLLVKGAVPGATGSDLIV 202


>gi|254246597|ref|ZP_04939918.1| Ribosomal protein L3 [Burkholderia cenocepacia PC184]
 gi|124871373|gb|EAY63089.1| Ribosomal protein L3 [Burkholderia cenocepacia PC184]
          Length = 220

 Score =  176 bits (446), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/200 (47%), Positives = 125/200 (62%), Gaps = 1/200 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 5   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 64

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR+       L  G+V     F VGQ VDV G++IGKG
Sbjct: 65  VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGADLFEVGQKVDVQGVSIGKG 124

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RATHG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 125 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 184

Query: 180 VSVDDKRGLILVKGCVPGAK 199
             +D +R L+LVKG +PGAK
Sbjct: 185 ARIDAERKLLLVKGAIPGAK 204


>gi|302869972|ref|YP_003838609.1| 50S ribosomal protein L3 [Micromonospora aurantiaca ATCC 27029]
 gi|315501433|ref|YP_004080320.1| 50S ribosomal protein l3 [Micromonospora sp. L5]
 gi|302572831|gb|ADL49033.1| 50S ribosomal protein L3 [Micromonospora aurantiaca ATCC 27029]
 gi|315408052|gb|ADU06169.1| 50S ribosomal protein L3 [Micromonospora sp. L5]
          Length = 221

 Score =  176 bits (446), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/215 (44%), Positives = 132/215 (61%), Gaps = 3/215 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   + +PVTV+    C V   R+ DK+GY AVQ+  G    + V K
Sbjct: 7   GILGAKLGMTQVWD-NNKVVPVTVVQAGPCVVSQVRSADKDGYSAVQLAYGVIDPRKVKK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G ++  +V+P++ + E R     D  P G   +   F  G ++DVTG T GKG++G 
Sbjct: 66  PIAGHYAKADVAPRRHIVELRTSDAADYAP-GQEVTVEEFPAGVVIDVTGKTKGKGYAGP 124

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GLRA+HGV   HRS GS G    PGRVFK  +MAGRMGG R TV+NL V +VD
Sbjct: 125 MKRHGFHGLRASHGVERKHRSPGSIGACATPGRVFKGTRMAGRMGGVRYTVQNLTVQAVD 184

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
            +  L+LV+G +PG  K + +LVR + K+ V   G
Sbjct: 185 TENNLLLVRGAIPGP-KGALVLVRTAAKAKVKKGG 218


>gi|262377312|ref|ZP_06070536.1| 50S ribosomal protein L3 [Acinetobacter lwoffii SH145]
 gi|262307765|gb|EEY88904.1| 50S ribosomal protein L3 [Acinetobacter lwoffii SH145]
          Length = 214

 Score =  176 bits (446), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/213 (43%), Positives = 133/213 (62%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+ +D  ++   +TL+ +GY A+Q+  GE +   
Sbjct: 3   MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAIQITTGERRESR 62

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFR  + D +   VG   +   F VGQ+VDVTG + GKG
Sbjct: 63  VTNAQKGHFAKAGVAAGRLVQEFRATEADLEGREVGGTLTVELFQVGQVVDVTGQSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVT + LE+
Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGAERVTTQGLEI 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V++D +R +++VKG VPGA     ++VR + K+
Sbjct: 183 VAIDTERSVLVVKGAVPGATGGD-VIVRPTIKA 214


>gi|107024303|ref|YP_622630.1| 50S ribosomal protein L3 [Burkholderia cenocepacia AU 1054]
 gi|116688372|ref|YP_833995.1| 50S ribosomal protein L3 [Burkholderia cenocepacia HI2424]
 gi|123244306|sp|Q1BRU8|RL3_BURCA RecName: Full=50S ribosomal protein L3
 gi|166233123|sp|A0K3M5|RL3_BURCH RecName: Full=50S ribosomal protein L3
 gi|105894492|gb|ABF77657.1| LSU ribosomal protein L3P [Burkholderia cenocepacia AU 1054]
 gi|116646461|gb|ABK07102.1| LSU ribosomal protein L3P [Burkholderia cenocepacia HI2424]
          Length = 217

 Score =  176 bits (446), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/200 (47%), Positives = 125/200 (62%), Gaps = 1/200 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 2   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR+       L  G+V     F VGQ VDV G++IGKG
Sbjct: 62  VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGADLFEVGQKVDVQGVSIGKG 121

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RATHG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 122 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 181

Query: 180 VSVDDKRGLILVKGCVPGAK 199
             +D +R L+LVKG +PGAK
Sbjct: 182 ARIDAERKLLLVKGAIPGAK 201


>gi|37678559|ref|NP_933168.1| 50S ribosomal protein L3 [Vibrio vulnificus YJ016]
 gi|42559591|sp|Q7MPI8|RL3_VIBVY RecName: Full=50S ribosomal protein L3
 gi|37197299|dbj|BAC93139.1| ribosomal protein L3 [Vibrio vulnificus YJ016]
          Length = 209

 Score =  176 bits (446), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 95/209 (45%), Positives = 133/209 (63%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+  EG  IPVTV+ ++  ++   +TL+ +GY A+QV AG  K   V+K
Sbjct: 3   GLIGRKVGMTRVFTEEGVSIPVTVVEVEANRIAQVKTLETDGYAAIQVTAGTKKANRVNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
              G F+   V   + L+EFR++  ++   VGS  +   F   + VDVTG + GKGF G 
Sbjct: 63  AEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|238025932|ref|YP_002910163.1| 50S ribosomal protein L3 [Burkholderia glumae BGR1]
 gi|237875126|gb|ACR27459.1| Ribosomal protein L3 [Burkholderia glumae BGR1]
          Length = 220

 Score =  176 bits (446), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 92/200 (46%), Positives = 125/200 (62%), Gaps = 1/200 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 5   MSLGLVGRKVGMTRIFTADGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 64

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR+       L  G++  P  F VGQ VDV G++IGKG
Sbjct: 65  VTKPLAGHLAKAGVEAGEILKEFRIDATKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 124

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RATHG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 125 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 184

Query: 180 VSVDDKRGLILVKGCVPGAK 199
             +D +R L+LVKG +PG K
Sbjct: 185 ARIDAERKLLLVKGAIPGTK 204


>gi|332107866|gb|EGJ09090.1| 50S ribosomal protein L3 [Rubrivivax benzoatilyticus JA2]
          Length = 223

 Score =  176 bits (445), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/210 (46%), Positives = 129/210 (61%), Gaps = 4/210 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  IPVTVL + N +V   +T+  +GY A+QV  G  K   V+K
Sbjct: 8   GLLGRKVGMMRIFTDDGDAIPVTVLDVSNNRVTQVKTVATDGYSALQVAFGARKASRVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKD--DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           P  G  +   V   + L EFRV  +      P G+V   S F  GQLVDV G +IGKG++
Sbjct: 68  PEAGHLAKAGVEAGEVLKEFRVTAEIAGQYQP-GAVVPVSLFAAGQLVDVQGTSIGKGYA 126

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNFG  RA+HG S SH   GS    QDPGRVF  KKM G MG   VT +NL++V 
Sbjct: 127 GTIKRHNFGSQRASHGNSRSHNVPGSISMAQDPGRVFPGKKMTGHMGDETVTTQNLDIVR 186

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           VD+ R L+LV+G VPGA KN  ++VR + K
Sbjct: 187 VDEARSLLLVRGAVPGA-KNGHVVVRPAVK 215


>gi|256821662|ref|YP_003145625.1| 50S ribosomal protein L3 [Kangiella koreensis DSM 16069]
 gi|256795201|gb|ACV25857.1| ribosomal protein L3 [Kangiella koreensis DSM 16069]
          Length = 210

 Score =  176 bits (445), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/212 (46%), Positives = 128/212 (60%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V  K GMT V+  +G  IPVTV+  D  ++   +T D +GY AVQ+  G  K   
Sbjct: 1   MAIGIVGIKRGMTRVFTEDGVSIPVTVVEADPNRIAQLKTTDVDGYEAVQITTGSRKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SK   G +    V   + L+EFRV   D    VG V     F  GQ VDVTG + GKG+
Sbjct: 61  ISKAEAGHYKKAGVEAGRSLWEFRVNSLDGF-EVGGVVKVDIFEAGQKVDVTGTSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF G  +THG S+SHR+ GS G  Q PGRVFK KKM+G MG  RVTV+ LEVV
Sbjct: 120 AGVIKRWNFRGQDSTHGNSLSHRAPGSIGQNQTPGRVFKGKKMSGHMGAERVTVQTLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA     ++VR + K+
Sbjct: 180 RVDAERNLLLIKGAVPGATGGD-VIVRPAEKA 210


>gi|254516911|ref|ZP_05128969.1| ribosomal protein L3 [gamma proteobacterium NOR5-3]
 gi|219674416|gb|EED30784.1| ribosomal protein L3 [gamma proteobacterium NOR5-3]
          Length = 231

 Score =  176 bits (445), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 97/211 (45%), Positives = 128/211 (60%), Gaps = 1/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT V+  +G  IPVTV+ +   +V   +  D +GY ++QV AG  K   
Sbjct: 21  MTIGLVGRKSGMTRVFTEDGASIPVTVVEVSPNRVTQIKENDSDGYRSIQVTAGSRKAAK 80

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK   G F+   V   + L+EFR+  +D+   VG+  +   F  GQ VDV G + GKGF
Sbjct: 81  VSKSEAGLFAKAGVEAGRGLWEFRLSAEDESFEVGAELTVERFEEGQKVDVAGKSKGKGF 140

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF    ATHG S+SHR+ GS G  Q PGRVFK KKM+G+MG   VTV+ LE+V
Sbjct: 141 QGVIKRWNFSMQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMSGQMGNANVTVQGLEIV 200

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L+L+KG VPGA     + VR + K
Sbjct: 201 RVDAERNLLLIKGAVPGAPGGD-VFVRPAVK 230


>gi|226198141|ref|ZP_03793712.1| 50S ribosomal protein L3 [Burkholderia pseudomallei Pakistan 9]
 gi|225929661|gb|EEH25677.1| 50S ribosomal protein L3 [Burkholderia pseudomallei Pakistan 9]
          Length = 208

 Score =  176 bits (445), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 91/189 (48%), Positives = 120/189 (63%), Gaps = 1/189 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   V+KP+ G  + 
Sbjct: 1   MTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASRVTKPLAGHLAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
             V   + L EFR++ D    L  G+V  P  F VGQ VDV G++IGKG++G +KR+NFG
Sbjct: 61  AGVEAGEILKEFRIEADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKGYAGTIKRYNFG 120

Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
             RA+HG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+  +D  R L+L
Sbjct: 121 SGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEIARIDADRKLLL 180

Query: 191 VKGCVPGAK 199
           VKG VPGAK
Sbjct: 181 VKGAVPGAK 189


>gi|114330574|ref|YP_746796.1| ribosomal protein L3 [Nitrosomonas eutropha C91]
 gi|122314432|sp|Q0AIJ5|RL3_NITEC RecName: Full=50S ribosomal protein L3
 gi|114307588|gb|ABI58831.1| LSU ribosomal protein L3P [Nitrosomonas eutropha C91]
          Length = 217

 Score =  176 bits (445), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 93/215 (43%), Positives = 136/215 (63%), Gaps = 3/215 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +K+GMT ++   G  +PVTVL +   +VV  +T +++GY A+Q+  G  +   
Sbjct: 1   MKLGLIGKKVGMTRIFTESGSSVPVTVLDVSKNRVVQIKTAERDGYSAIQLTQGYRRKNR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD--DDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           ++K + G F+   V   K + EFR+++   +  L +GS  +   F  G  VDV+G++IGK
Sbjct: 61  ITKALSGHFARAGVEAGKVIKEFRIEQQAINSDLKLGSEINVEIFLTGSKVDVSGVSIGK 120

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           G++G +KRHNF   RA+HG S SH   GS G  QDPGRVF  KKM GR+GG   T++N+E
Sbjct: 121 GYAGTIKRHNFSSSRASHGNSRSHNVPGSIGMAQDPGRVFPGKKMTGRLGGVNSTIQNIE 180

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           VV VD  RGLI +KG VPG+K N  + +R S K A
Sbjct: 181 VVRVDTVRGLIFLKGSVPGSKGN-GVFIRPSVKHA 214


>gi|212634829|ref|YP_002311354.1| 50S ribosomal protein L3 [Shewanella piezotolerans WP3]
 gi|226730567|sp|B8CND3|RL3_SHEPW RecName: Full=50S ribosomal protein L3
 gi|212556313|gb|ACJ28767.1| Ribosomal protein L3 [Shewanella piezotolerans WP3]
          Length = 212

 Score =  176 bits (445), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 92/206 (44%), Positives = 127/206 (61%), Gaps = 1/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++N +G  +PVTV+ +   +V   +TLD +GY A+QV  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFNEDGASVPVTVIEIAANRVTQVKTLDTDGYRALQVTTGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++KP  G F+   V   + L+E R+   D + + VG+  +   F     VDVTG + GKG
Sbjct: 61  ITKPEAGHFAKAGVEAGRGLWELRLADGDGEGIEVGAELNVDIFADIAKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF     THG S++HRS+GS G  Q PGRVFK KKM+G MG  RVT +NL++
Sbjct: 121 FQGGIKRWNFHAQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205
           V VD +R L+LVKG VPGA     I+
Sbjct: 181 VRVDAERNLLLVKGAVPGATNGDLII 206


>gi|310821093|ref|YP_003953451.1| 50S ribosomal protein L3 [Stigmatella aurantiaca DW4/3-1]
 gi|309394165|gb|ADO71624.1| 50S ribosomal protein L3 [Stigmatella aurantiaca DW4/3-1]
          Length = 223

 Score =  176 bits (445), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 98/220 (44%), Positives = 136/220 (61%), Gaps = 3/220 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V+N EG  +PVTV+ +  CQVV  RT +K+ Y AV +G GE + K +++
Sbjct: 3   GLIGKKIGMTQVFNDEGNLVPVTVVDVSTCQVVGKRTPEKDQYSAVTLGFGEIREKVLNQ 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
             RGFF   + + ++ L EFRV  +D     VG       FT GQLVDVTG T G+GFSG
Sbjct: 63  AQRGFFKKNSAALRRHLKEFRVTPEDAAQFNVGDAVKADLFTKGQLVDVTGTTKGRGFSG 122

Query: 123 AMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            M+R +F G +  THG     R  G+ G R+ PGR + NKKM G  G  +VT +NL VV 
Sbjct: 123 VMRRWSFKGSQTKTHGTHEYQRHPGAIGQRKTPGRTYPNKKMPGHYGVEQVTTQNLTVVD 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
           VD ++GL+L+KG VPG   ++ + VR S K A+  + K S
Sbjct: 183 VDTEKGLLLIKGAVPG-HNDAIVYVRPSVKVALRAQHKAS 221


>gi|315655881|ref|ZP_07908779.1| 50S ribosomal protein L3 [Mobiluncus curtisii ATCC 51333]
 gi|315656193|ref|ZP_07909084.1| 50S ribosomal protein L3 [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315489945|gb|EFU79572.1| 50S ribosomal protein L3 [Mobiluncus curtisii ATCC 51333]
 gi|315493195|gb|EFU82795.1| 50S ribosomal protein L3 [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 218

 Score =  176 bits (445), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 93/209 (44%), Positives = 130/209 (62%), Gaps = 2/209 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RKLGMT V++ +G+ IPVTV+ ++   V   RT + +GY AVQ+G G+   + V+KP
Sbjct: 12  LLGRKLGMTQVWDEDGKLIPVTVVQVEKNVVTQIRTNETDGYDAVQLGFGKMDERKVTKP 71

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M G F+   V P++ L E R   D     +G       F  G LVDV+G T GKGF+G M
Sbjct: 72  MAGHFAKAGVEPRRHLAEIRT-GDASSYELGQELGAEVFEAGTLVDVSGNTKGKGFAGVM 130

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH F G+ A+HG   +HR  GS G    PGRVFK   MAGRMGGNR T+ NL+V +VD 
Sbjct: 131 KRHGFQGVSASHGAHRNHRKPGSIGACATPGRVFKGLNMAGRMGGNRRTIMNLKVQAVDA 190

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           ++GL+++ G +PG  K   +++R + K A
Sbjct: 191 EKGLVVLTGAIPGP-KGGIVMIRSAVKGA 218


>gi|251787971|ref|YP_003002692.1| 50S ribosomal protein L3 [Dickeya zeae Ech1591]
 gi|247536592|gb|ACT05213.1| ribosomal protein L3 [Dickeya zeae Ech1591]
          Length = 209

 Score =  175 bits (444), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 97/202 (48%), Positives = 129/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  EG  IPVTV+ ++  +V   +TL+ +GY AVQV AG  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEEGVSIPVTVIEIEANRVTQVKTLENDGYRAVQVTAGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L EFR+  D +   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRVLREFRLA-DSEEFAVGQDISVEIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|298500580|ref|ZP_07010384.1| LSU ribosomal protein L3 [Vibrio cholerae MAK 757]
 gi|297540749|gb|EFH76806.1| LSU ribosomal protein L3 [Vibrio cholerae MAK 757]
          Length = 209

 Score =  175 bits (444), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 95/208 (45%), Positives = 133/208 (63%), Gaps = 2/208 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   V+KP
Sbjct: 4   LIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGSKKANRVTKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
             G F+   V   + L+EFR++  ++   VGS  +   F   + VDVTG + GKGF GA+
Sbjct: 64  EAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQGAV 122

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD 
Sbjct: 123 KRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVDA 182

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 183 ERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|170729009|ref|YP_001763035.1| 50S ribosomal protein L3 [Shewanella woodyi ATCC 51908]
 gi|226730568|sp|B1KMY3|RL3_SHEWM RecName: Full=50S ribosomal protein L3
 gi|169814356|gb|ACA88940.1| ribosomal protein L3 [Shewanella woodyi ATCC 51908]
          Length = 212

 Score =  175 bits (444), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 93/206 (45%), Positives = 128/206 (62%), Gaps = 1/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  IPVTV+ +   +V   RTL+ +GY A+QV  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFTEDGASIPVTVIEIAANRVTQVRTLETDGYRALQVTTGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++KP  G F+   V   + L+E R+  D+ + + VG+  +   F     VDVTG + GKG
Sbjct: 61  ITKPEAGHFAKAGVEAGRGLWEVRLADDEGEGIEVGAELNVDIFADVAKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF     THG S++HRS+GS G  Q PGRVFK KKM+G MG  RVT +NL+V
Sbjct: 121 FQGGIKRWNFHAQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205
           V VD +R L+LVKG VPGA   + I+
Sbjct: 181 VRVDAERNLLLVKGAVPGATNGNLII 206


>gi|152978141|ref|YP_001343770.1| 50S ribosomal protein L3 [Actinobacillus succinogenes 130Z]
 gi|171472958|sp|A6VLI8|RL3_ACTSZ RecName: Full=50S ribosomal protein L3
 gi|150839864|gb|ABR73835.1| ribosomal protein L3 [Actinobacillus succinogenes 130Z]
          Length = 208

 Score =  175 bits (444), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 99/209 (47%), Positives = 132/209 (63%), Gaps = 3/209 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+K
Sbjct: 3   GLVGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKASRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V   + L+EFR + ++    +G   +   F   + VDVTG + GKGF G 
Sbjct: 63  PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQGG 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV VD
Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 180

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+LVKG VPGA  NS ++V+ + K+
Sbjct: 181 AERKLLLVKGAVPGA-TNSDVIVKPAVKA 208


>gi|317054766|ref|YP_004103233.1| 50S ribosomal protein L3 [Ruminococcus albus 7]
 gi|315447035|gb|ADU20599.1| 50S ribosomal protein L3 [Ruminococcus albus 7]
          Length = 212

 Score =  175 bits (444), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 92/211 (43%), Positives = 133/211 (63%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +K+GMT +++  G+ +PVTV+    C VV  +T++K+GY AVQ+G GE + K 
Sbjct: 1   MQKGIIGKKIGMTQIFDEAGKIVPVTVVEAGPCVVVQKKTVEKDGYEAVQLGYGEIRAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F   +V+ K+ L EFR+  D   + VG +     F  G +VDV+G + G GF
Sbjct: 61  VNKPLQGHFKKADVAIKRTLKEFRLA-DISAVNVGDIVKADVFAEGDVVDVSGTSKGHGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG +KRHN   L+ THG    HR  GS G   DP R++K KKM G+ G  +VTV+NL VV
Sbjct: 120 SGTIKRHNGHRLKETHGTGPVHRHAGSYGACSDPSRIYKGKKMPGQYGNVKVTVQNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +  LI +KG +PG  KN  + + DS K
Sbjct: 180 KVDAENNLIAIKGAIPGP-KNGTVTICDSVK 209


>gi|262203624|ref|YP_003274832.1| 50S ribosomal protein L3 [Gordonia bronchialis DSM 43247]
 gi|262086971|gb|ACY22939.1| 50S ribosomal protein L3 [Gordonia bronchialis DSM 43247]
          Length = 219

 Score =  175 bits (444), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 94/208 (45%), Positives = 128/208 (61%), Gaps = 2/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      +   RT D++GY AVQ+  G    + V+K
Sbjct: 9   GILGTKLGMTQVFDENNRVVPVTVIQAGPNVITQLRTADRDGYTAVQLAYGAIDPRKVTK 68

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G +S   V+P++ L E RV  D     VG   +   F  G LVDVTG + GKGF+G 
Sbjct: 69  PVAGQYSKAGVTPRRHLAEIRVN-DVSEFEVGQELTAEVFAEGSLVDVTGTSKGKGFAGV 127

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GL A+HG    HR+ GS G    PGRVFK  +MAGRMG ++VT +NL V  VD
Sbjct: 128 MKRHGFSGLGASHGAHRVHRAPGSIGGCATPGRVFKGMRMAGRMGNDKVTTQNLTVHKVD 187

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            + GL+L+KG +PG +K   ++VRD+ K
Sbjct: 188 AEAGLLLIKGAIPG-RKGGIVVVRDAVK 214


>gi|330906708|ref|XP_003295571.1| hypothetical protein PTT_01689 [Pyrenophora teres f. teres 0-1]
 gi|311333041|gb|EFQ96334.1| hypothetical protein PTT_01689 [Pyrenophora teres f. teres 0-1]
          Length = 331

 Score =  175 bits (444), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 92/200 (46%), Positives = 132/200 (66%), Gaps = 3/200 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G++A K GMT +Y+ E G+R   TVL +D  +VV H+  +KNGY AVQ+GAG+ + +
Sbjct: 84  LRTGLLAIKKGMTSMYDPETGKRAACTVLQVDRNEVVAHKRREKNGYWAVQIGAGQKEAR 143

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           NV++PM G F++  VSPK+ + EF V+ +  L + +G +   ++FT GQ VDV G   GK
Sbjct: 144 NVTRPMLGHFAAAGVSPKRWVAEFEVRDEAGLQVGIGEMVGANWFTKGQFVDVKGTNKGK 203

Query: 119 GFSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           GF+G MKRH FGG  A+HG S+ HR    + G +    RV   K+M G MG    TVKNL
Sbjct: 204 GFAGGMKRHGFGGQPASHGQSLMHRGMGSAGGSQGSGSRVLPGKRMPGNMGNQSCTVKNL 263

Query: 178 EVVSVDDKRGLILVKGCVPG 197
           +V+ VD+  G+++V GCVPG
Sbjct: 264 KVLQVDEANGIVVVNGCVPG 283


>gi|226939186|ref|YP_002794257.1| 50S ribosomal protein L3 [Laribacter hongkongensis HLHK9]
 gi|254803677|sp|C1DAR7|RL3_LARHH RecName: Full=50S ribosomal protein L3
 gi|226714110|gb|ACO73248.1| RplC [Laribacter hongkongensis HLHK9]
          Length = 214

 Score =  175 bits (444), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 97/207 (46%), Positives = 128/207 (61%), Gaps = 1/207 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V+  +G+ IPVTVL +   +V   +T D +GY AVQV  G  K   
Sbjct: 1   MSLGLVGRKVGMTRVFAEDGQSIPVTVLDMSANRVTQIKTADTDGYNAVQVAYGSKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V K   G F+   V   + L EF         L VG   +   F VGQLVDVTG + GKG
Sbjct: 61  VLKAEAGHFAKAGVEAGRGLKEFTADAAKLAELKVGDTLTVELFQVGQLVDVTGTSQGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNF   RA+HG S++ R+ GS G  QDPGRVF  K+MAG+ G  + TV++LEV
Sbjct: 121 FSGVIKRHNFSSNRASHGNSVTTRAPGSIGQAQDPGRVFPGKRMAGQYGNVKRTVQSLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILV 206
           V +D +R L+L+KG VPG+K N  +++
Sbjct: 181 VRIDAERQLLLIKGSVPGSKGNDVVVL 207


>gi|298345472|ref|YP_003718159.1| 50S ribosomal protein L3 [Mobiluncus curtisii ATCC 43063]
 gi|304391028|ref|ZP_07372980.1| 50S ribosomal protein L3 [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|298235533|gb|ADI66665.1| 50S ribosomal protein L3 [Mobiluncus curtisii ATCC 43063]
 gi|304325911|gb|EFL93157.1| 50S ribosomal protein L3 [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 217

 Score =  175 bits (444), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 93/209 (44%), Positives = 130/209 (62%), Gaps = 2/209 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RKLGMT V++ +G+ IPVTV+ ++   V   RT + +GY AVQ+G G+   + V+KP
Sbjct: 11  LLGRKLGMTQVWDEDGKLIPVTVVQVEKNVVTQIRTNETDGYDAVQLGFGKMDERKVTKP 70

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M G F+   V P++ L E R   D     +G       F  G LVDV+G T GKGF+G M
Sbjct: 71  MAGHFAKAGVEPRRHLAEIRT-GDASSYELGQELGAEVFEAGTLVDVSGNTKGKGFAGVM 129

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH F G+ A+HG   +HR  GS G    PGRVFK   MAGRMGGNR T+ NL+V +VD 
Sbjct: 130 KRHGFQGVSASHGAHRNHRKPGSIGACATPGRVFKGLNMAGRMGGNRRTIMNLKVQAVDA 189

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           ++GL+++ G +PG  K   +++R + K A
Sbjct: 190 EKGLVVLTGAIPGP-KGGIVMIRSAVKGA 217


>gi|239929514|ref|ZP_04686467.1| 50S ribosomal protein L3 [Streptomyces ghanaensis ATCC 14672]
 gi|291437839|ref|ZP_06577229.1| 50S ribosomal protein L3 [Streptomyces ghanaensis ATCC 14672]
 gi|291340734|gb|EFE67690.1| 50S ribosomal protein L3 [Streptomyces ghanaensis ATCC 14672]
          Length = 214

 Score =  175 bits (444), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 97/210 (46%), Positives = 128/210 (60%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+K
Sbjct: 7   GILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G 
Sbjct: 67  PLKGHFAKADVTPRRHLVEIRTS-DASEYTLGQEVTAEVFEAGVKVDVTGKSKGKGFAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNFGGL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +VD
Sbjct: 126 MKRHNFGGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++GL+L+KG VPG      +LVR + K A
Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214


>gi|326793558|ref|YP_004311378.1| 50S ribosomal protein L3 [Marinomonas mediterranea MMB-1]
 gi|326544322|gb|ADZ89542.1| 50S ribosomal protein L3 [Marinomonas mediterranea MMB-1]
          Length = 212

 Score =  175 bits (444), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 94/201 (46%), Positives = 126/201 (62%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           +V RK GMT ++N +G  +PVTV+ ++  +V   +T + +GY AVQV  GE +   V+K 
Sbjct: 5   LVGRKAGMTRIFNEDGVSVPVTVIEVEPNRVTQVKTAETDGYSAVQVTVGERRANRVNKA 64

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
             G F+  NV   + L+EFR+   +  + VG   + + F     VDVTG + GKGF G +
Sbjct: 65  AAGHFAKANVEAGRGLWEFRLAGGEKEINVGDELTVADFESVTTVDVTGQSKGKGFQGGI 124

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHNF    ATHG S+SHR+ GS G  Q PGRV+K KKMAG MG  +VT ++LEVV VD 
Sbjct: 125 KRHNFSMQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGHMGAAQVTTQSLEVVRVDA 184

Query: 185 KRGLILVKGCVPGAKKNSWIL 205
           +R LILVKG VPGA     +L
Sbjct: 185 ERNLILVKGAVPGATNGDVVL 205


>gi|308178136|ref|YP_003917542.1| 50S ribosomal protein L3 [Arthrobacter arilaitensis Re117]
 gi|307745599|emb|CBT76571.1| 50S ribosomal protein L3 [Arthrobacter arilaitensis Re117]
          Length = 216

 Score =  175 bits (444), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 92/210 (43%), Positives = 129/210 (61%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++     IPVTV+  D+  V      +++GY AVQ+G G+   + V+K
Sbjct: 9   GLLGTKLGMTQVWDSNNNLIPVTVVQADSNVVTKLINEERDGYTAVQIGYGQIDPRKVTK 68

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F +  V+P++ L E R   D      G   S   F  GQ VDV G + GKGF+G 
Sbjct: 69  PLAGHFEAAGVTPRRHLVELRT-ADAAEYTAGQELSVEVFEAGQKVDVVGTSKGKGFAGV 127

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF G+ A+HG   +HR  GS G    PGRVF+ +KMAGRMG  RVT +NL + ++D
Sbjct: 128 MKRHNFHGVGASHGAHKNHRKPGSIGGASTPGRVFRGQKMAGRMGAERVTTQNLTIHAID 187

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++ L+L+KG VPGA +   +LVR++ K A
Sbjct: 188 AEKNLLLIKGAVPGA-RGRVVLVRNAVKGA 216


>gi|294630893|ref|ZP_06709453.1| 50S ribosomal protein L3 [Streptomyces sp. e14]
 gi|292834226|gb|EFF92575.1| 50S ribosomal protein L3 [Streptomyces sp. e14]
          Length = 214

 Score =  175 bits (444), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 97/210 (46%), Positives = 128/210 (60%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+K
Sbjct: 7   GILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G 
Sbjct: 67  PLKGHFAKADVTPRRHLVEIRTA-DAAEYTLGQEITAEVFEAGVKVDVTGKSKGKGFAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNFGGL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +VD
Sbjct: 126 MKRHNFGGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++GL+L+KG VPG      +LVR + K A
Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214


>gi|196003476|ref|XP_002111605.1| hypothetical protein TRIADDRAFT_3973 [Trichoplax adhaerens]
 gi|190585504|gb|EDV25572.1| hypothetical protein TRIADDRAFT_3973 [Trichoplax adhaerens]
          Length = 250

 Score =  175 bits (443), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 92/210 (43%), Positives = 135/210 (64%), Gaps = 3/210 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA-GEAKVKN 60
           R+G++  KLGM  ++  +G R+PVT++ +  C V+ ++T  K+GY AVQVGA    K+  
Sbjct: 14  RTGLIGVKLGMMPMWMKDGTRVPVTLIKIQQCHVLHNKTKAKDGYCAVQVGAVDRLKLLY 73

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V +   G F+   V+PK+K++EF+V  DD L+  G++    +F  GQ VDV   TIGKGF
Sbjct: 74  VRRAQLGHFARAGVNPKRKVWEFKVS-DDALILRGTLLHAMHFVPGQYVDVKAKTIGKGF 132

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G MK+H   G  ATHGVS++HR  G+TG  Q+PGR++  KKMAGRMG    T KNL ++
Sbjct: 133 QGVMKKHGMKGQPATHGVSLTHRKMGATGGGQEPGRIWPGKKMAGRMGNKYHTTKNLRIL 192

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
            ++ K  ++ VKG VPG  +N +I + D+ 
Sbjct: 193 RINTKYDILYVKGAVPG-HENQFIRITDAI 221


>gi|302390958|ref|YP_003826778.1| 50S ribosomal protein L3P [Acetohalobium arabaticum DSM 5501]
 gi|302203035|gb|ADL11713.1| LSU ribosomal protein L3P [Acetohalobium arabaticum DSM 5501]
          Length = 209

 Score =  175 bits (443), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 92/211 (43%), Positives = 134/211 (63%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ +K+GMT +++ EG  IPVTV+    C +V  +T +K+GY A+Q+G GEAK   
Sbjct: 1   MTREILGKKVGMTQIFDDEGEVIPVTVIEAGPCSIVQKKTEEKDGYKAIQLGFGEAKESK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP++G F    V PK+ + E R+ ++D+   VG       F VG  VDVTG + GKGF
Sbjct: 61  LNKPLKGHFDKYGVEPKEYIREVRINEEDE-YEVGDEIKADIFAVGDRVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF     THG S ++R  GS G   DP RVFK KKM GRMG  +VT++NL+V 
Sbjct: 120 AGTVKRWNFNLGPKTHG-SRNYRLPGSIGASADPARVFKGKKMPGRMGREQVTIQNLKVA 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD ++ ++ VKG VPG KK + + +++S K
Sbjct: 179 KVDPEKNILAVKGAVPGPKK-ALVRIKESVK 208


>gi|189195810|ref|XP_001934243.1| 50S ribosomal protein L3 [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187980122|gb|EDU46748.1| 50S ribosomal protein L3 [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 332

 Score =  175 bits (443), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 92/200 (46%), Positives = 132/200 (66%), Gaps = 3/200 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G++A K GMT +Y+ E G+R   TVL +D  +VV H+  +KNGY AVQ+GAG+ + +
Sbjct: 84  LRTGLLAIKKGMTSMYDPETGKRAACTVLQVDRNEVVAHKRREKNGYWAVQIGAGQKEAR 143

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           NV++PM G F++  VSPK+ + EF V+ +  L + +G +   ++FT GQ VDV G   GK
Sbjct: 144 NVTRPMLGHFAAAGVSPKRWVAEFEVRDEAGLQVGIGEMVGANWFTQGQFVDVKGTNKGK 203

Query: 119 GFSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           GF+G MKRH FGG  A+HG S+ HR    + G +    RV   K+M G MG    TVKNL
Sbjct: 204 GFAGGMKRHGFGGQPASHGQSLMHRGMGSAGGSQGSGSRVLPGKRMPGNMGNQSCTVKNL 263

Query: 178 EVVSVDDKRGLILVKGCVPG 197
           +V+ VD+  G+++V GCVPG
Sbjct: 264 KVLQVDEANGIVVVGGCVPG 283


>gi|115378276|ref|ZP_01465444.1| ribosomal protein L3 [Stigmatella aurantiaca DW4/3-1]
 gi|115364718|gb|EAU63785.1| ribosomal protein L3 [Stigmatella aurantiaca DW4/3-1]
          Length = 259

 Score =  175 bits (443), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 98/220 (44%), Positives = 136/220 (61%), Gaps = 3/220 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V+N EG  +PVTV+ +  CQVV  RT +K+ Y AV +G GE + K +++
Sbjct: 39  GLIGKKIGMTQVFNDEGNLVPVTVVDVSTCQVVGKRTPEKDQYSAVTLGFGEIREKVLNQ 98

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
             RGFF   + + ++ L EFRV  +D     VG       FT GQLVDVTG T G+GFSG
Sbjct: 99  AQRGFFKKNSAALRRHLKEFRVTPEDAAQFNVGDAVKADLFTKGQLVDVTGTTKGRGFSG 158

Query: 123 AMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            M+R +F G +  THG     R  G+ G R+ PGR + NKKM G  G  +VT +NL VV 
Sbjct: 159 VMRRWSFKGSQTKTHGTHEYQRHPGAIGQRKTPGRTYPNKKMPGHYGVEQVTTQNLTVVD 218

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
           VD ++GL+L+KG VPG   ++ + VR S K A+  + K S
Sbjct: 219 VDTEKGLLLIKGAVPG-HNDAIVYVRPSVKVALRAQHKAS 257


>gi|170700694|ref|ZP_02891689.1| ribosomal protein L3 [Burkholderia ambifaria IOP40-10]
 gi|171318348|ref|ZP_02907506.1| ribosomal protein L3 [Burkholderia ambifaria MEX-5]
 gi|172059341|ref|YP_001806993.1| 50S ribosomal protein L3 [Burkholderia ambifaria MC40-6]
 gi|212288249|sp|B1YRD0|RL3_BURA4 RecName: Full=50S ribosomal protein L3
 gi|170134364|gb|EDT02697.1| ribosomal protein L3 [Burkholderia ambifaria IOP40-10]
 gi|171096426|gb|EDT41325.1| ribosomal protein L3 [Burkholderia ambifaria MEX-5]
 gi|171991858|gb|ACB62777.1| ribosomal protein L3 [Burkholderia ambifaria MC40-6]
          Length = 216

 Score =  175 bits (443), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 93/200 (46%), Positives = 125/200 (62%), Gaps = 1/200 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR+       L  G+V     F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGADLFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RATHG S SH   GS G  QDPGRVF  K+M G +G   VTV+NLE+
Sbjct: 121 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAK 199
             +D +R L+LVKG +PGAK
Sbjct: 181 ARIDAERKLLLVKGAIPGAK 200


>gi|91774635|ref|YP_544391.1| 50S ribosomal protein L3P [Methylobacillus flagellatus KT]
 gi|122985649|sp|Q1H4N7|RL3_METFK RecName: Full=50S ribosomal protein L3
 gi|91708622|gb|ABE48550.1| LSU ribosomal protein L3P [Methylobacillus flagellatus KT]
          Length = 214

 Score =  175 bits (443), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 97/214 (45%), Positives = 132/214 (61%), Gaps = 6/214 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  EG  +PVTVL +   +V   +T   +GY ++QV  GE +   
Sbjct: 1   MSLGLIGRKVGMTRIFTDEGESVPVTVLEVVPNRVTQIKTAASDGYTSLQVAYGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP---VGSVFSPSYFTVGQLVDVTGMTIG 117
           + K + G ++   VS    + EF V   DD+L    VG   +   F  GQLVDVTG ++G
Sbjct: 61  IGKALAGHYAKAGVSAGAGIKEFPV--SDDVLANYSVGGQITVELFQPGQLVDVTGTSLG 118

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGFSGA+KRHNF   RA+HG S SH   GS G  QDPGRVF  K+M G +G  + TV+NL
Sbjct: 119 KGFSGAIKRHNFSSNRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMPGHLGAVKTTVQNL 178

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           E+V VD +R L+L+KG VPG+K    ++VR S K
Sbjct: 179 EIVRVDAERNLLLIKGAVPGSKGGD-VVVRPSVK 211


>gi|291451913|ref|ZP_06591303.1| 50S ribosomal protein L3 [Streptomyces albus J1074]
 gi|291354862|gb|EFE81764.1| 50S ribosomal protein L3 [Streptomyces albus J1074]
          Length = 214

 Score =  175 bits (443), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 97/210 (46%), Positives = 127/210 (60%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      V   RT D +GY AVQ+  GE   + V+K
Sbjct: 7   GILGEKLGMTQVWDENNRVVPVTVVKAGANVVTQVRTNDTDGYEAVQIAFGEIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G 
Sbjct: 67  PLKGHFAKADVTPRRHLVEIRTA-DASEYTLGQELNADTFEAGLKVDVTGKSKGKGFAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +VD
Sbjct: 126 MKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++GL+L+KG VPG      +LVR + K A
Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214


>gi|159463470|ref|XP_001689965.1| mitochondrial ribosomal protein L3 [Chlamydomonas reinhardtii]
 gi|158283953|gb|EDP09703.1| mitochondrial ribosomal protein L3 [Chlamydomonas reinhardtii]
          Length = 285

 Score =  175 bits (443), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 95/209 (45%), Positives = 132/209 (63%), Gaps = 2/209 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+G +A K GMT  ++  G R+P+TVL +D CQVV  +T   +GY A+ +G+G  + K 
Sbjct: 6   LRTGCIATKAGMTQEWDEHGVRVPLTVLWVDECQVVGLKTRPVHGYNALMLGSGYKRQKC 65

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +S    GFF    V  KK + E++V  +D L+PVG+    +++  GQ VDVTG T  KGF
Sbjct: 66  MSPSEAGFFLKAGVPFKKLVAEWQVS-EDALVPVGTAIGAAHYVAGQRVDVTGWTKWKGF 124

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G M+R  F GL A+HGVS+SHR+ GS G RQDPG+++K KK+ G MG  R TV N  V 
Sbjct: 125 QGVMRRWGFKGLPASHGVSLSHRAPGSIGNRQDPGKIWKGKKLPGCMGDERRTVHNCLVY 184

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            VD  R L+ ++G VPG    S + +RDS
Sbjct: 185 KVDAARNLVYLRGQVPGPVGRS-VFLRDS 212


>gi|269976879|ref|ZP_06183853.1| 50S ribosomal protein L3 [Mobiluncus mulieris 28-1]
 gi|306819491|ref|ZP_07453198.1| 50S ribosomal protein L3 [Mobiluncus mulieris ATCC 35239]
 gi|269934710|gb|EEZ91270.1| 50S ribosomal protein L3 [Mobiluncus mulieris 28-1]
 gi|304647783|gb|EFM45101.1| 50S ribosomal protein L3 [Mobiluncus mulieris ATCC 35239]
          Length = 218

 Score =  175 bits (443), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 89/207 (42%), Positives = 130/207 (62%), Gaps = 2/207 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RKLGMT V++ EG+ +PVTV+ ++   V   RT +++GY A+Q+G G+   + V+KP
Sbjct: 12  LLGRKLGMTQVWDEEGKLVPVTVVEVEKNVVTDIRTPERDGYTALQLGFGQLDERKVTKP 71

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M G F+   V+P++ L E R   D D   +G       F  G LVDVTG T GKGF+G M
Sbjct: 72  MAGHFAKSGVTPRRHLAEVRTT-DADSYELGQELGADLFETGALVDVTGNTKGKGFAGVM 130

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH F G+ ++HG   +HR  GS G    PGRVF+   MAGRMGG R T+ NL+V ++D 
Sbjct: 131 KRHGFQGVSSSHGAHRNHRKPGSIGACATPGRVFRGLNMAGRMGGERRTIMNLKVQAIDA 190

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
            +GL+++ G +PG  K   +++R + K
Sbjct: 191 DKGLVVIAGAIPGP-KGGIVMIRSAVK 216


>gi|115350322|ref|YP_772161.1| 50S ribosomal protein L3 [Burkholderia ambifaria AMMD]
 gi|134294443|ref|YP_001118178.1| 50S ribosomal protein L3 [Burkholderia vietnamiensis G4]
 gi|122324266|sp|Q0BJ46|RL3_BURCM RecName: Full=50S ribosomal protein L3
 gi|166233128|sp|A4JAP0|RL3_BURVG RecName: Full=50S ribosomal protein L3
 gi|115280310|gb|ABI85827.1| LSU ribosomal protein L3P [Burkholderia ambifaria AMMD]
 gi|134137600|gb|ABO53343.1| LSU ribosomal protein L3P [Burkholderia vietnamiensis G4]
          Length = 217

 Score =  175 bits (443), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 93/200 (46%), Positives = 125/200 (62%), Gaps = 1/200 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 2   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR+       L  G+V     F VGQ VDV G++IGKG
Sbjct: 62  VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGADLFEVGQKVDVQGVSIGKG 121

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RATHG S SH   GS G  QDPGRVF  K+M G +G   VTV+NLE+
Sbjct: 122 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTVTVQNLEI 181

Query: 180 VSVDDKRGLILVKGCVPGAK 199
             +D +R L+LVKG +PGAK
Sbjct: 182 ARIDAERKLLLVKGAIPGAK 201


>gi|237749515|ref|ZP_04579995.1| large subunit ribosomal protein L3 [Oxalobacter formigenes OXCC13]
 gi|229380877|gb|EEO30968.1| large subunit ribosomal protein L3 [Oxalobacter formigenes OXCC13]
          Length = 222

 Score =  175 bits (443), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 94/216 (43%), Positives = 132/216 (61%), Gaps = 2/216 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GM  ++  EG  IPVTV+ + + +V   +T + +GY AVQV  G+ +   
Sbjct: 5   MSLGLIGRKVGMMRIFTDEGDSIPVTVVDVSDNRVTQVKTTETDGYTAVQVAFGKRRPSR 64

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V     L EF V +     +  G V   + F  GQ +DV G++IGKG
Sbjct: 65  VNKAAAGHFAKAGVEAGTVLREFTVDESKAAEVKAGDVLPATMFEAGQKIDVQGVSIGKG 124

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KRHNF   RATHG S+SH   GS G  QDPGRVF  KKM G MG    T++NLE+
Sbjct: 125 YAGTIKRHNFASGRATHGNSLSHNVPGSIGMNQDPGRVFPGKKMTGHMGDVTKTIQNLEI 184

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             +D +R L+LVKG VPGA KN+ ++VR + K+ V+
Sbjct: 185 ARIDAERNLLLVKGAVPGA-KNAEVIVRPAVKTKVS 219


>gi|126666813|ref|ZP_01737790.1| Ribosomal protein L3 [Marinobacter sp. ELB17]
 gi|126628858|gb|EAZ99478.1| Ribosomal protein L3 [Marinobacter sp. ELB17]
          Length = 212

 Score =  174 bits (442), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 91/200 (45%), Positives = 130/200 (65%), Gaps = 3/200 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++  +G+ +PVTV+ +D+ ++   +TL+ +GY AVQ+  G  +   
Sbjct: 1   MAIGIVGRKAGMTRIFTEDGQALPVTVIEVDSNRITQLKTLENDGYRAVQITVGSRRSSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQ--KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           V+K   G F+   V   + ++EFR+   + +DL+  G + + S F  GQ VD TG + GK
Sbjct: 61  VNKSAAGHFAKAGVEAGRSVWEFRLADGEGEDLVAGGEI-TASVFEDGQAVDATGTSKGK 119

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG+MG  +VTV+NL+
Sbjct: 120 GFQGGVKRWNFAMQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQMGNAQVTVQNLK 179

Query: 179 VVSVDDKRGLILVKGCVPGA 198
           +V VD +R L+LV G VPGA
Sbjct: 180 IVRVDAERNLLLVSGAVPGA 199


>gi|159901426|ref|YP_001547673.1| 50S ribosomal protein L3 [Herpetosiphon aurantiacus ATCC 23779]
 gi|226726278|sp|A9B412|RL3_HERA2 RecName: Full=50S ribosomal protein L3
 gi|159894465|gb|ABX07545.1| ribosomal protein L3 [Herpetosiphon aurantiacus ATCC 23779]
          Length = 212

 Score =  174 bits (442), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 101/216 (46%), Positives = 137/216 (63%), Gaps = 9/216 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M +G++ RK+GMT ++  +G  IPVTV+    C V   RT DK+GY AVQ+G GE K + 
Sbjct: 1   MLNGILGRKIGMTQIFTEKGETIPVTVIEAGPCVVTQLRTKDKDGYEAVQLGFGEIKPRK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEF-RVQKDDDLLP--VGSVFSPSYFTVGQLVDVTGMTIG 117
           V+KP++G   +       +L  F R  K  DL    VG V +   F +G+ +DV G + G
Sbjct: 61  VTKPIQGHLKAAG-----RLVRFMREVKTTDLNAHNVGDVVNVDIFQIGEKIDVVGTSKG 115

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           +GF+G +KRH F G  ATHG S  HR+ GS G    PGRV+KN +MAGRMG +RVTV+NL
Sbjct: 116 RGFAGVVKRHGFRGGPATHGQSDRHRAPGSIGSGTTPGRVWKNMRMAGRMGNDRVTVQNL 175

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           EVV +D +R +ILVKG VPGA KN  ++V  + K+ 
Sbjct: 176 EVVKIDLERHVILVKGSVPGA-KNGLVMVSRAAKAT 210


>gi|237747365|ref|ZP_04577845.1| 50S ribosomal protein L3 [Oxalobacter formigenes HOxBLS]
 gi|229378716|gb|EEO28807.1| 50S ribosomal protein L3 [Oxalobacter formigenes HOxBLS]
          Length = 222

 Score =  174 bits (442), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 96/216 (44%), Positives = 133/216 (61%), Gaps = 2/216 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GM  ++  EG  IPVTV+ + + +V   +T + +GY AVQV  G+ +   
Sbjct: 5   MSLGLIGRKVGMMRIFTDEGDSIPVTVVDVSDNRVTQVKTTETDGYAAVQVAFGKRRPSR 64

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G ++   V     L EFRV       +  G V   + F VGQ +DV G++IGKG
Sbjct: 65  VNKAAAGHYAKAGVEAGTVLREFRVDATKAAEMKAGDVVPVTLFEVGQKIDVQGVSIGKG 124

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KRHNFG  RATHG S+SH   GS G  QDPGRVF  KKM G MG    TV+NLE+
Sbjct: 125 YAGTIKRHNFGSGRATHGNSLSHNVPGSIGMNQDPGRVFPGKKMTGHMGDETRTVQNLEI 184

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             +D +R L+LVKG VPGA KN+ ++V  + K+ V+
Sbjct: 185 ARIDAERNLLLVKGAVPGA-KNAQVVVCPAVKTKVS 219


>gi|221632978|ref|YP_002522201.1| 50S ribosomal protein L3 [Thermomicrobium roseum DSM 5159]
 gi|254803699|sp|B9KZY7|RL3_THERP RecName: Full=50S ribosomal protein L3
 gi|221155754|gb|ACM04881.1| ribosomal protein L3 [Thermomicrobium roseum DSM 5159]
          Length = 214

 Score =  174 bits (442), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 103/212 (48%), Positives = 130/212 (61%), Gaps = 5/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RKLGMT +++ EGR IPVTVL +  C V   +T D++GY AVQ+G G  K +N
Sbjct: 1   MIEGLLGRKLGMTQIFDDEGRAIPVTVLEVGPCVVTQVKTSDRDGYQAVQLGFGHRKRQN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
             +PM+G   +   SP+  L E RV  D     VG V   + F  GQLVDV G   G+GF
Sbjct: 61  --RPMQGHLRASGASPRY-LKEVRVD-DATRFQVGQVIDCTIFQPGQLVDVIGWRKGRGF 116

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH F G   THG S  HR+ GS G   DPGRV K K+MAGRMG  RVTV+NL V 
Sbjct: 117 QGGVKRHGFAGGPKTHGQSDRHRAPGSIGPTTDPGRVHKGKRMAGRMGPVRVTVQNLRVE 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LV+G VPG   N  ++VR + K 
Sbjct: 177 RVDPQRNLVLVRGAVPG-HPNGLVIVRYAVKQ 207


>gi|172087649|ref|YP_203618.2| 50S ribosomal subunit protein L3 [Vibrio fischeri ES114]
 gi|197333952|ref|YP_002154996.1| 50S ribosomal protein L3 [Vibrio fischeri MJ11]
 gi|226730588|sp|B5FG09|RL3_VIBFM RecName: Full=50S ribosomal protein L3
 gi|171902244|gb|AAW84730.2| 50S ribosomal subunit protein L3 [Vibrio fischeri ES114]
 gi|197315442|gb|ACH64889.1| 50S ribosomal protein L3 [Vibrio fischeri MJ11]
          Length = 209

 Score =  174 bits (442), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 95/209 (45%), Positives = 134/209 (64%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT ++  EG  IPVTV+ ++  +V   +T++ +GY A+QV  G  K   VSK
Sbjct: 3   GLVGRKVGMTRIFTEEGVSIPVTVVEVEANRVSQVKTVETDGYNAIQVTCGSKKANRVSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF GA
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGAELTVEVFNEIKKVDVTGTSKGKGFQGA 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+L+KG VPG+   + ++V+ + K+
Sbjct: 182 AERNLLLIKGAVPGSTGGN-VIVKPAVKA 209


>gi|92112554|ref|YP_572482.1| 50S ribosomal protein L3P [Chromohalobacter salexigens DSM 3043]
 gi|123387627|sp|Q1R0H5|RL3_CHRSD RecName: Full=50S ribosomal protein L3
 gi|91795644|gb|ABE57783.1| LSU ribosomal protein L3P [Chromohalobacter salexigens DSM 3043]
          Length = 212

 Score =  174 bits (442), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 94/212 (44%), Positives = 136/212 (64%), Gaps = 1/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V +K GMT ++   G  +PVTV+ ++  +V   +T++ +GY AVQV +G  K K+
Sbjct: 1   MTIGLVGKKSGMTRIFTENGASVPVTVIEVEPNRVTRVKTVESDGYSAVQVTSGSRKAKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++K   G ++   V   + L EFR+ + ++   VG   + S F  GQ VDVTG + GKGF
Sbjct: 61  LTKAAAGQYAKSGVEAGRSLMEFRLAEGEEAPEVGGNITVSLFEAGQKVDVTGTSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR NF      HG S++HR+ GS G  Q PGRVFK KKMAG++G  RVTV++LE+V
Sbjct: 121 QGAVKRWNFRTQDNGHGNSLAHRAPGSIGQCQTPGRVFKGKKMAGQLGNERVTVQSLEIV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA  +  ++VR + K+
Sbjct: 181 RVDAERNLLLVKGAVPGA-TDCEVIVRSAVKA 211


>gi|154274402|ref|XP_001538052.1| hypothetical protein HCAG_05657 [Ajellomyces capsulatus NAm1]
 gi|150414492|gb|EDN09854.1| hypothetical protein HCAG_05657 [Ajellomyces capsulatus NAm1]
          Length = 265

 Score =  174 bits (442), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 87/195 (44%), Positives = 132/195 (67%), Gaps = 2/195 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GMT ++++E G+RIP T+L LD  QV+ H+TL KNGY AVQ+G G    +
Sbjct: 71  LRTGTLAIKKGMTAIFDLETGKRIPCTILQLDRVQVISHKTLKKNGYYAVQIGCGWKHER 130

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            V++PM G F++  V+PK+ + EFRV+ ++ LLP+G + + ++F  GQ VD    + G G
Sbjct: 131 AVTRPMLGHFAANGVAPKRHIHEFRVKDENGLLPIGEMINANWFQEGQYVDARSNSRGMG 190

Query: 120 FSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKRH F G   +HGVS++HR    S   +    RV+  KKMAG MG  +VT++NL+
Sbjct: 191 FAGVMKRHGFHGQDRSHGVSLTHRSMGSSGPGQGGGSRVYPGKKMAGNMGNKQVTLQNLK 250

Query: 179 VVSVDDKRGLILVKG 193
           V+ VD ++G+++V G
Sbjct: 251 VLKVDAEKGIVVVNG 265


>gi|311744809|ref|ZP_07718605.1| 50S ribosomal protein L3 [Aeromicrobium marinum DSM 15272]
 gi|311311926|gb|EFQ81847.1| 50S ribosomal protein L3 [Aeromicrobium marinum DSM 15272]
          Length = 222

 Score =  174 bits (442), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 93/208 (44%), Positives = 130/208 (62%), Gaps = 2/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT V++ + R +PVTV+  D   V   RT + +GY AVQ+G GE   + V+K
Sbjct: 11  GLLGRKLGMTQVWDADNRVVPVTVIAADTNVVTQIRTRETDGYSAVQLGFGEIDGRKVNK 70

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ + E R +   D   +G   SP  F  G +VDVTG + GKGF+G 
Sbjct: 71  PQSGHFDKAGVTPRRHVVEIRTEAIADYT-LGQEISPEIFAAGDVVDVTGTSKGKGFAGV 129

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G+ A+HG   +HR  GS G    PGRVFK  +MAG MG ++VT +NL V +VD
Sbjct: 130 MKRHGFHGVGASHGAHRNHRKPGSIGGCATPGRVFKGLRMAGHMGTDQVTTQNLTVHAVD 189

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            ++G+IL+KG VPG  K   +++R + K
Sbjct: 190 LEKGVILIKGAVPG-PKGQLVVIRSAAK 216


>gi|209693924|ref|YP_002261852.1| 50S ribosomal protein L3 [Aliivibrio salmonicida LFI1238]
 gi|226725124|sp|B6EPS5|RL3_ALISL RecName: Full=50S ribosomal protein L3
 gi|208007875|emb|CAQ78005.1| 50S ribosomal protein L3 [Aliivibrio salmonicida LFI1238]
          Length = 209

 Score =  174 bits (441), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 95/209 (45%), Positives = 133/209 (63%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT ++  EG  IPVTV+ ++  +V   +T++ +GY A+QV  G  K   VSK
Sbjct: 3   GLVGRKVGMTRIFTEEGVSIPVTVVEVEVNRVSQVKTVETDGYNAIQVTCGSKKANRVSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR++  ++   VG+  S   F   + VDVTG + GKGF GA
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLENGEEFT-VGAELSVEIFNEIKKVDVTGTSKGKGFQGA 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  R T +NLE+V VD
Sbjct: 122 IKRWNFATQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERCTTQNLEIVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+L+KG VPG+   + ++V+ + K+
Sbjct: 182 AERNLLLIKGAVPGSTGGN-VIVKPAVKA 209


>gi|54307541|ref|YP_128561.1| 50S ribosomal protein L3 [Photobacterium profundum SS9]
 gi|81828878|sp|Q6LVB6|RL3_PHOPR RecName: Full=50S ribosomal protein L3
 gi|46911961|emb|CAG18759.1| putative ribosomal protein L3 [Photobacterium profundum SS9]
          Length = 209

 Score =  174 bits (441), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 90/195 (46%), Positives = 125/195 (64%), Gaps = 1/195 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT ++  EG  IPVTV+ ++  +V   ++L+ +GY A+Q+  G  K   VSK
Sbjct: 3   GLIGRKVGMTRIFTEEGISIPVTVVEVEANRVTQVKSLETDGYNAIQITTGTKKANRVSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF G 
Sbjct: 63  PAAGHFAKAGVEAGRGLWEFRLENGEEF-AVGAELNVELFNEVKKVDVTGTSKGKGFQGV 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 IKRWNFSTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKRGLILVKGCVPGA 198
            +R L+L+KG VPG+
Sbjct: 182 AERNLLLIKGAVPGS 196


>gi|262273379|ref|ZP_06051193.1| LSU ribosomal protein L3p (L3e) [Grimontia hollisae CIP 101886]
 gi|262222357|gb|EEY73668.1| LSU ribosomal protein L3p (L3e) [Grimontia hollisae CIP 101886]
          Length = 209

 Score =  174 bits (441), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 96/209 (45%), Positives = 133/209 (63%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT ++  EG  IPVTV+ ++  +V   RT + +GY A+QV  G  K   ++K
Sbjct: 3   GLVGRKVGMTRIFTEEGVSIPVTVVEVETNRVTQVRTPEVDGYSAIQVTTGVKKASRITK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF GA
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELNVDLFADIKKVDVTGTSKGKGFQGA 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+L+KG VPGA   S ++V+ + K+
Sbjct: 182 AERKLLLIKGAVPGA-TGSNVIVKPAVKA 209


>gi|160932201|ref|ZP_02079592.1| hypothetical protein CLOLEP_01036 [Clostridium leptum DSM 753]
 gi|156868803|gb|EDO62175.1| hypothetical protein CLOLEP_01036 [Clostridium leptum DSM 753]
          Length = 210

 Score =  174 bits (441), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 130/212 (61%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +K+GMT +++  G+ +PVTV+    C V   +T++ +GY AVQ+G G+ K   
Sbjct: 1   MQKGIIGKKIGMTQIFDENGKVVPVTVVEAGPCVVSQKKTVENDGYAAVQIGFGDLKAHK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V KPM G F+  NV+PK+ L EFR   D D   VG +     F  G  VDVTG + GKG+
Sbjct: 61  VKKPMAGHFAKANVAPKRTLREFRFD-DIDAYNVGDLVKADVFAAGDKVDVTGTSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF  L+ +HG     R  GS G   DP RV+  KKMAG +G  RVTV+NL+VV
Sbjct: 120 AGVIKRWNFQRLKESHGSGPVARHGGSIGSCSDPSRVYPGKKMAGHLGSERVTVQNLQVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  LI +KG +PG    + +++ D+ K+
Sbjct: 180 KVDAENNLIAIKGAIPGPNGGT-VVIHDTVKA 210


>gi|325678624|ref|ZP_08158234.1| 50S ribosomal protein L3 [Ruminococcus albus 8]
 gi|324109674|gb|EGC03880.1| 50S ribosomal protein L3 [Ruminococcus albus 8]
          Length = 212

 Score =  174 bits (441), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 91/211 (43%), Positives = 133/211 (63%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +K+GMT +++  G+ +PVTV+    C VV  +T++ +GY AVQ+G GE + K 
Sbjct: 1   MQKGIIGKKIGMTQIFDETGKVVPVTVVEAGPCVVVQKKTVENDGYEAVQLGYGEIRAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F   +V+ K+ L EF++  D   + VG +     FT G +VDV+G + G GF
Sbjct: 61  VNKPLQGHFKKADVAMKRTLKEFKLA-DAANMNVGDIVKAEVFTEGDVVDVSGTSKGHGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG +KRHN   L+ THG    HR  GS G   DP R++K KKM G+ G  +VTV+NL VV
Sbjct: 120 SGTIKRHNGHRLKETHGTGPVHRHAGSYGACSDPSRIYKGKKMPGQYGNVKVTVQNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +  LI +KG +PG  KN  + + DS K
Sbjct: 180 KVDAENNLIAIKGAIPGP-KNGTVTICDSVK 209


>gi|297159597|gb|ADI09309.1| 50S ribosomal protein L3 [Streptomyces bingchenggensis BCW-1]
          Length = 214

 Score =  174 bits (441), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 97/210 (46%), Positives = 126/210 (60%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+  KLGMT V++   R +PVTV+    C V   RT D +GY AVQ+  GE   + V+K
Sbjct: 7   GVLGEKLGMTQVWDENNRIVPVTVVKAGPCVVTQVRTADSDGYDAVQIAFGEIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKG +G 
Sbjct: 67  PLKGHFAKADVTPRRHLVELRTA-DASEYALGQEVTAEVFESGVKVDVTGTSKGKGTAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +VD
Sbjct: 126 MKRHGFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++GL+L+KG VPG      +LVR + K A
Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214


>gi|257095040|ref|YP_003168681.1| 50S ribosomal protein L3 [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257047564|gb|ACV36752.1| ribosomal protein L3 [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 214

 Score =  174 bits (441), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 101/213 (47%), Positives = 132/213 (61%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  +PVTVL + N +V   +T   +GY  VQV  G+ +   
Sbjct: 1   MSLGLVGRKVGMTRIFTDDGISVPVTVLDVSNNRVAQIKTPQNDGYSVVQVAFGKRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQ-KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           VSKP+ G  +   V     L EF V   +   L  G   S + F VGQ VDVTG TIGKG
Sbjct: 61  VSKPLAGHLAKAGVEAGHVLKEFPVSVAELATLKPGDQISVTIFAVGQKVDVTGKTIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRH+F    A HG S+SH++ GSTG  QDPGRVF  KKMAG +G  + T +NLEV
Sbjct: 121 FSGGIKRHHFSSQGAAHGNSVSHQALGSTGMAQDPGRVFPGKKMAGHLGAVKRTQQNLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD  R L+L+KG VPG+ K S ++VR + K+
Sbjct: 181 VRVDVDRQLLLLKGAVPGS-KGSDVIVRPAVKA 212


>gi|83648852|ref|YP_437287.1| ribosomal protein L3 [Hahella chejuensis KCTC 2396]
 gi|109893432|sp|Q2S912|RL3_HAHCH RecName: Full=50S ribosomal protein L3
 gi|83636895|gb|ABC32862.1| Ribosomal protein L3 [Hahella chejuensis KCTC 2396]
          Length = 212

 Score =  174 bits (441), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 92/199 (46%), Positives = 127/199 (63%), Gaps = 1/199 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++  +G  +PVTV+ ++   +   ++L+ +GY A+QV +G  K   
Sbjct: 1   MAIGLVGRKAGMTRLFEDDGAAVPVTVIQVEKNVIAQVKSLEVDGYRAIQVTSGSVKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KPM G F+   V   + + EF +   D     VG   S + F  GQ VDV+G + GKG
Sbjct: 61  VNKPMAGHFAKAGVEAGRVVCEFTLDATDSAEYKVGDEVSVTIFEAGQKVDVSGRSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KR NF    ATHG S+SHR+ GS G  Q PGRVFK KKMAG+MG   VTV+ L+V
Sbjct: 121 FAGVIKRWNFSTQDATHGNSLSHRAPGSIGQNQSPGRVFKGKKMAGQMGNKNVTVQTLKV 180

Query: 180 VSVDDKRGLILVKGCVPGA 198
           V VD+++GL+L+KG VPGA
Sbjct: 181 VRVDEEKGLLLIKGAVPGA 199


>gi|307328030|ref|ZP_07607211.1| 50S ribosomal protein L3 [Streptomyces violaceusniger Tu 4113]
 gi|306886335|gb|EFN17340.1| 50S ribosomal protein L3 [Streptomyces violaceusniger Tu 4113]
          Length = 214

 Score =  174 bits (441), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 97/210 (46%), Positives = 126/210 (60%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+  KLGMT V++   R +PVTV+    C V   RT D +GY AVQ+  GE   + V+K
Sbjct: 7   GVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTDDADGYSAVQIAFGEIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKG +G 
Sbjct: 67  PLKGHFAKADVTPRRHLVELRTT-DAGEYTLGQEVTAEVFESGVRVDVTGTSKGKGTAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +VD
Sbjct: 126 MKRHGFAGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++GL+L+KG VPG      +LVR + K A
Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214


>gi|156973051|ref|YP_001443958.1| 50S ribosomal protein L3 [Vibrio harveyi ATCC BAA-1116]
 gi|269959691|ref|ZP_06174071.1| 50S ribosomal protein L3 [Vibrio harveyi 1DA3]
 gi|166234607|sp|A7MWI3|RL3_VIBHB RecName: Full=50S ribosomal protein L3
 gi|156524645|gb|ABU69731.1| hypothetical protein VIBHAR_00730 [Vibrio harveyi ATCC BAA-1116]
 gi|269835614|gb|EEZ89693.1| 50S ribosomal protein L3 [Vibrio harveyi 1DA3]
          Length = 209

 Score =  174 bits (441), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 94/209 (44%), Positives = 134/209 (64%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY A+QV AG  K   V+K
Sbjct: 3   GLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
              G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF GA
Sbjct: 63  AEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGAELTVELFNETKKVDVTGTSKGKGFQGA 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+L+KG VPG+   + ++V+ + K+
Sbjct: 182 AERNLLLIKGAVPGSTGGN-VIVKPAVKA 209


>gi|269104012|ref|ZP_06156709.1| LSU ribosomal protein L3p (L3e) [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163910|gb|EEZ42406.1| LSU ribosomal protein L3p (L3e) [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 209

 Score =  174 bits (441), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 92/209 (44%), Positives = 134/209 (64%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT ++   G  IPVTV+ ++  +V   +T++ +GY A+Q+  G  K   V+K
Sbjct: 3   GLIGRKVGMTRIFTEAGVSIPVTVVEVEANRVSQVKTVETDGYNAIQITTGSKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR++ +++   VG+  +   F   + VDVTG + GKGF GA
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLENNEEF-AVGAELTVELFNEVKKVDVTGTSKGKGFQGA 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|39997949|ref|NP_953900.1| 50S ribosomal protein L3 [Geobacter sulfurreducens PCA]
 gi|42559575|sp|P60454|RL3_GEOSL RecName: Full=50S ribosomal protein L3
 gi|39984894|gb|AAR36250.1| ribosomal protein L3 [Geobacter sulfurreducens PCA]
 gi|298506888|gb|ADI85611.1| ribosomal protein L3 [Geobacter sulfurreducens KN400]
          Length = 210

 Score =  174 bits (441), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 96/211 (45%), Positives = 133/211 (63%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++A+KLGMT ++  +G+RIPVTV+    C V+  +T   +GY A+QVG    + + 
Sbjct: 1   MKKGLIAKKLGMTQIFAEDGKRIPVTVVQAGPCVVLQKKTSATDGYDAIQVGFLSQEARK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM G   +        + EFR+  D D   VG V S   F VG+ +DVTG +IGKGF
Sbjct: 61  VTKPMLGHIKAAGQGAFAHIREFRLD-DVDRYNVGDVISADAFEVGEYIDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR  F G R++HG S  HR+ GS G    P RVFKNKKM G++G  RVTV+ L+VV
Sbjct: 120 QGVIKRWGFRGGRSSHG-SCFHRAPGSIGSSAYPSRVFKNKKMPGQLGNERVTVQRLQVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD    ++L+KG +PGA KN  +LV+D+ K
Sbjct: 179 RVDAADNILLIKGAIPGA-KNGIVLVKDTVK 208


>gi|290477192|ref|YP_003470107.1| 50S ribosomal subunit protein L3 [Xenorhabdus bovienii SS-2004]
 gi|289176540|emb|CBJ83349.1| 50S ribosomal subunit protein L3 [Xenorhabdus bovienii SS-2004]
          Length = 210

 Score =  174 bits (441), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 92/202 (45%), Positives = 127/202 (62%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPV+V+ ++  ++   +  + +GY A+QV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVSVIEIEENRITQVKDQESDGYRAIQVTTGSKKANRVNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L EFR+  DD+   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRTLREFRLSLDDEEYTVGQSISVEIFANVKKVDVTGTSKGKGFAGT 122

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV VD
Sbjct: 123 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVD 182

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 183 AERNLLLVKGAVPGATGSDLIV 204


>gi|71905961|ref|YP_283548.1| 50S ribosomal protein L3 [Dechloromonas aromatica RCB]
 gi|109893424|sp|Q47JA3|RL3_DECAR RecName: Full=50S ribosomal protein L3
 gi|71845582|gb|AAZ45078.1| LSU ribosomal protein L3P [Dechloromonas aromatica RCB]
          Length = 212

 Score =  174 bits (441), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 132/213 (61%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTVL + N +V   +T + +GY A+QV  G+ +   
Sbjct: 1   MSLGLVGRKVGMTRIFAEDGASIPVTVLDVSNNRVTQVKTPEIDGYAAIQVAFGKRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           VSKP+ G  +   V     L EF+++ D       G   + + F  GQ VDVTG +IGKG
Sbjct: 61  VSKPLAGHLAKAGVEAGHVLKEFQIEADQLASFKAGDQVAVTIFAEGQKVDVTGTSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KRHNF   RA+HG S+SH + GS G  QDPGRVF  K+MAG +G  + T++ L +
Sbjct: 121 FQGGIKRHNFSSNRASHGNSLSHNAPGSIGMAQDPGRVFPGKRMAGHLGDVQSTMQGLTI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD  R L+LVKG VPGA K S ++VR + K+
Sbjct: 181 VRVDADRQLLLVKGAVPGA-KGSDVVVRPAVKA 212


>gi|269219006|ref|ZP_06162860.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269212117|gb|EEZ78457.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 221

 Score =  174 bits (440), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 93/209 (44%), Positives = 130/209 (62%), Gaps = 2/209 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++  KLGMT +++  GR +P+TV+ +    V   RT + +GY AVQ+ +GE K KNV+KP
Sbjct: 15  LLGTKLGMTQLWDEAGRVVPITVVRVGTNVVTQIRTPETDGYSAVQLASGELKTKNVTKP 74

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           ++G F    V+P++KL E R   D     +G   +   F  GQ VDV G + GKGF+G M
Sbjct: 75  LQGHFDKAGVAPRRKLAEIRTS-DAAEYELGQELTADLFEAGQKVDVIGTSKGKGFAGVM 133

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH F G+ A+HG   +HR  GS G    P RVF+  +MAGRMG +RVTV NL V +VD 
Sbjct: 134 KRHGFSGVSASHGAHRNHRKPGSIGACATPSRVFRGLRMAGRMGKDRVTVLNLPVHAVDV 193

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           ++G+IL+ G VPG  K   ++VR + K A
Sbjct: 194 EKGIILLAGAVPG-NKGGTVVVRTAVKGA 221


>gi|87122971|ref|ZP_01078832.1| 50S ribosomal subunit protein L3 [Marinomonas sp. MED121]
 gi|86161739|gb|EAQ63043.1| 50S ribosomal subunit protein L3 [Marinomonas sp. MED121]
          Length = 212

 Score =  174 bits (440), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 94/201 (46%), Positives = 125/201 (62%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           +V RK GMT ++N +G  +PVTV+ ++  +V   +T D +GY AVQV  G  +   V+K 
Sbjct: 5   LVGRKAGMTRIFNEDGVSVPVTVIEVEPNRVTQVKTADTDGYTAVQVTVGSRRASRVNKA 64

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
             G F+   V   + L+EFR+  D+  + VG   + + F     VDV G + GKGF GA+
Sbjct: 65  AAGHFAKAKVEAGRGLWEFRLSGDEKEINVGDELTVADFESIATVDVIGQSKGKGFQGAI 124

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHNF    ATHG S+SHR+ GS G  Q PGRV+K KKMAG MG  +VT ++LEVV VD 
Sbjct: 125 KRHNFSMQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGHMGAAQVTTQSLEVVRVDL 184

Query: 185 KRGLILVKGCVPGAKKNSWIL 205
           +R LI+VKG VPGA     IL
Sbjct: 185 ERNLIIVKGAVPGATNGDVIL 205


>gi|317494342|ref|ZP_07952756.1| 50S ribosomal protein L3 [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917592|gb|EFV38937.1| 50S ribosomal protein L3 [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 209

 Score =  174 bits (440), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 96/202 (47%), Positives = 128/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   +TLD +GY AVQV  G  K   VSK
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKTLDNDGYCAVQVTTGAKKANRVSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L EFR+ + ++   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRTLREFRLNEGEEFT-VGQSISVEIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA     I+
Sbjct: 182 AERNLLLVKGAVPGATGGDLIV 203


>gi|190572944|ref|YP_001970789.1| 50S ribosomal protein L3 [Stenotrophomonas maltophilia K279a]
 gi|194364534|ref|YP_002027144.1| 50S ribosomal protein L3 [Stenotrophomonas maltophilia R551-3]
 gi|254522293|ref|ZP_05134348.1| ribosomal protein L3 [Stenotrophomonas sp. SKA14]
 gi|226730572|sp|B4SKW3|RL3_STRM5 RecName: Full=50S ribosomal protein L3
 gi|226730573|sp|B2FQ45|RL3_STRMK RecName: Full=50S ribosomal protein L3
 gi|190010866|emb|CAQ44475.1| putative 50S ribosomal protein L3 [Stenotrophomonas maltophilia
           K279a]
 gi|194347338|gb|ACF50461.1| ribosomal protein L3 [Stenotrophomonas maltophilia R551-3]
 gi|219719884|gb|EED38409.1| ribosomal protein L3 [Stenotrophomonas sp. SKA14]
          Length = 216

 Score =  174 bits (440), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 99/211 (46%), Positives = 131/211 (62%), Gaps = 4/211 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G V RK GM+ V+  +GR IPVT++     ++   +T++ +GY AVQV  G  +   V+K
Sbjct: 8   GFVGRKAGMSRVFTEDGRSIPVTLIEATPNRIAQIKTVETDGYSAVQVTVGARRAALVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           P  G F+   V   + L+EFRV+ D  L    VG       F VGQ+VDV G+T GKGF 
Sbjct: 68  PEAGHFAKAKVEAGRGLWEFRVE-DAQLGDFAVGGEVKADIFEVGQIVDVQGVTKGKGFQ 126

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  + + +NLEVV 
Sbjct: 127 GTIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVK 186

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VD +RGLI V+G VPGA     ++VR + K+
Sbjct: 187 VDVERGLIAVRGAVPGAAGGD-VIVRPASKA 216


>gi|108757306|ref|YP_631567.1| 50S ribosomal protein L3 [Myxococcus xanthus DK 1622]
 gi|123374502|sp|Q1D706|RL3_MYXXD RecName: Full=50S ribosomal protein L3
 gi|108461186|gb|ABF86371.1| ribosomal protein L3 [Myxococcus xanthus DK 1622]
          Length = 224

 Score =  174 bits (440), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/220 (44%), Positives = 135/220 (61%), Gaps = 3/220 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V+N EG  +PVTV+ +  CQVV  RT +K+ Y AV +G GE + K ++ 
Sbjct: 3   GLIGKKIGMTQVFNDEGNLVPVTVIDVGTCQVVGKRTPEKDNYSAVTIGFGEIREKILNL 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
             RGFF   N   ++ L EFRV  ++     VG       F  G+LVDVTG+T G+GFSG
Sbjct: 63  AERGFFKKANAPYRRHLKEFRVTPEEAASFNVGDAVKADMFAKGELVDVTGITKGRGFSG 122

Query: 123 AMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            M+R NF G +  THG     R  G+ G R+ PGRV+ NKKM G  G ++VT +NL VV 
Sbjct: 123 VMRRWNFKGSQTKTHGTHEYQRHPGAIGQRKTPGRVYPNKKMPGHYGVDQVTTQNLTVVD 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
           VD ++GL+LVKG V G   N  + +R S K+A+  + K +
Sbjct: 183 VDVEKGLVLVKGAVAG-HNNGVVYIRPSIKAAMRAQHKAA 221


>gi|302553542|ref|ZP_07305884.1| 50S ribosomal protein L3 [Streptomyces viridochromogenes DSM 40736]
 gi|302471160|gb|EFL34253.1| 50S ribosomal protein L3 [Streptomyces viridochromogenes DSM 40736]
          Length = 214

 Score =  174 bits (440), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/210 (46%), Positives = 127/210 (60%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+K
Sbjct: 7   GILGEKLGMTQVWDANNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G FS  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G 
Sbjct: 67  PLKGHFSKADVTPRRHLVEIRTA-DASEYTLGQEITAEVFEAGVKVDVTGKSKGKGFAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +VD
Sbjct: 126 MKRHNFRGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++GL+L+KG VPG      +LVR + K A
Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214


>gi|186477588|ref|YP_001859058.1| 50S ribosomal protein L3 [Burkholderia phymatum STM815]
 gi|226725142|sp|B2JIG6|RL3_BURP8 RecName: Full=50S ribosomal protein L3
 gi|184194047|gb|ACC72012.1| ribosomal protein L3 [Burkholderia phymatum STM815]
          Length = 219

 Score =  174 bits (440), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 93/200 (46%), Positives = 123/200 (61%), Gaps = 1/200 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGTRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EF++       L  G+V     F VGQ VDV G +IGKG
Sbjct: 61  VTKPLAGHLAKAGVQAGEILKEFQIDAAKAAELSSGAVIGVDLFEVGQKVDVQGTSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RA+HG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAK 199
             +D  R L+LVKG VPGAK
Sbjct: 181 ARIDADRKLLLVKGAVPGAK 200


>gi|323173956|gb|EFZ59584.1| ribosomal protein L3 family protein [Escherichia coli LT-68]
          Length = 209

 Score =  174 bits (440), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 94/202 (46%), Positives = 129/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+ + ++  PVG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLAEGEEF-PVGQSISVELFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|85713373|ref|ZP_01044382.1| Ribosomal protein L3 [Idiomarina baltica OS145]
 gi|85692801|gb|EAQ30790.1| Ribosomal protein L3 [Idiomarina baltica OS145]
          Length = 212

 Score =  174 bits (440), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 93/199 (46%), Positives = 129/199 (64%), Gaps = 1/199 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V+  +G  +PVTV+ +   +V   +T + +GY A+QV  GE K   
Sbjct: 1   MAIGLVGRKVGMTRVFQEDGASVPVTVIEVLANRVTQVKTEETDGYRALQVTTGEKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP  G F+  +    + L+EFR++  + D   VGS  +   F+  + VDVTG + GKG
Sbjct: 61  VNKPSAGHFAKASSEAGRGLWEFRLEDGEGDDFAVGSEITVEVFSEIKKVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG+MG  RVT ++LE+
Sbjct: 121 FAGTVKRWNFRTQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNERVTTQSLEL 180

Query: 180 VSVDDKRGLILVKGCVPGA 198
           V VD +R L+L+KG VPGA
Sbjct: 181 VRVDAERNLLLIKGAVPGA 199


>gi|260914680|ref|ZP_05921146.1| 50S ribosomal protein L3 [Pasteurella dagmatis ATCC 43325]
 gi|260631279|gb|EEX49464.1| 50S ribosomal protein L3 [Pasteurella dagmatis ATCC 43325]
          Length = 209

 Score =  174 bits (440), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 96/209 (45%), Positives = 133/209 (63%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT ++N +G  IPVTV+ ++  +V   +T++ +GY A+QV  G  K   V+K
Sbjct: 3   GLVGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTVETDGYSAIQVTTGSKKASRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V   + L+EFR  + ++   +G   +   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFVKAGVEAGRGLWEFRTTEGEEF-TLGQEINVDIFADVKKVDVTGTSKGKGFAGG 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+LVKG VPGA  N  ++V+ + K+
Sbjct: 182 AERKLLLVKGAVPGA-TNGDVIVKPAVKA 209


>gi|56461024|ref|YP_156305.1| ribosomal protein L3 [Idiomarina loihiensis L2TR]
 gi|81821713|sp|Q5QXZ0|RL3_IDILO RecName: Full=50S ribosomal protein L3
 gi|56180034|gb|AAV82756.1| Ribosomal protein L3 [Idiomarina loihiensis L2TR]
          Length = 212

 Score =  174 bits (440), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 95/213 (44%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V+  +G  +PVTV+ +   +V   ++ D +GY A+QV  GE K   
Sbjct: 1   MAIGLVGRKVGMTRVFQEDGASVPVTVIEVLANRVTQVKSDDTDGYRALQVTTGEKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G F+       + L+EFR+Q  + +   VGS  +   F     VDVTG + GKG
Sbjct: 61  VTKPLAGHFAKAGTEAGRGLWEFRLQNGEGEDYAVGSELTVDIFAEVNKVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG+MG  +VT ++LE+
Sbjct: 121 FAGTVKRWNFSMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNEQVTTQSLEL 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+L+KG VPGA   S ++V+ + K+
Sbjct: 181 VRVDAERSLLLIKGAVPGA-TGSDVIVKPAVKA 212


>gi|330447037|ref|ZP_08310687.1| 50S ribosomal subunit protein L3 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491228|dbj|GAA05184.1| 50S ribosomal subunit protein L3 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 209

 Score =  174 bits (440), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 93/209 (44%), Positives = 134/209 (64%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT ++  +G  IPVTV+ ++  +V   ++++ +GY A+QV  G  K   VSK
Sbjct: 3   GLIGRKVGMTRIFTEDGVSIPVTVVEVEANRVTQVKSVETDGYNAIQVTTGSKKANRVSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF GA
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLENSEEF-AVGAELNVELFNDIKKVDVTGTSKGKGFQGA 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|289523369|ref|ZP_06440223.1| 50S ribosomal protein L3 [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503061|gb|EFD24225.1| 50S ribosomal protein L3 [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 209

 Score =  174 bits (440), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 93/208 (44%), Positives = 131/208 (62%), Gaps = 6/208 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT +++ EG+ +PVTV+    C+VV  R  +   Y A+ +G G+ K   
Sbjct: 1   MSLGILGVKVGMTQIFDEEGQAVPVTVVEAGPCKVVALRRPEVEMYSAIVLGFGKVKAHR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           ++KPM G +    + PK+ L EFR+   DD+    VG     + F VG++VDVTG + GK
Sbjct: 61  LNKPMLGVYKKAGIEPKRWLREFRL---DDVTGYEVGQTIDVTIFEVGEVVDVTGTSKGK 117

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF+G MKRH FGG  A+HG S+ HR  GS+G    P  VFK K M GRMG  RVTVKNL+
Sbjct: 118 GFAGVMKRHGFGGGPASHGASLFHRRAGSSGASSFPSHVFKGKTMPGRMGNERVTVKNLK 177

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILV 206
           VV+VD +  L+L+KG +PG  +N  ++V
Sbjct: 178 VVAVDKENNLLLIKGAIPGP-RNGLVMV 204


>gi|29831469|ref|NP_826103.1| 50S ribosomal protein L3 [Streptomyces avermitilis MA-4680]
 gi|42559612|sp|Q82DP5|RL3_STRAW RecName: Full=50S ribosomal protein L3
 gi|29608584|dbj|BAC72638.1| putative ribosomal protein L3 [Streptomyces avermitilis MA-4680]
          Length = 214

 Score =  174 bits (440), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 96/210 (45%), Positives = 127/210 (60%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+K
Sbjct: 7   GILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDSDGYESVQIAFGEIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G 
Sbjct: 67  PLKGHFAKADVTPRRHLVEIRTA-DASEYTLGQEITAETFEAGVKVDVTGKSKGKGFAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +VD
Sbjct: 126 MKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++GL+L+KG VPG      +LVR + K A
Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214


>gi|271502246|ref|YP_003335272.1| 50S ribosomal protein L3 [Dickeya dadantii Ech586]
 gi|270345801|gb|ACZ78566.1| 50S ribosomal protein L3 [Dickeya dadantii Ech586]
          Length = 209

 Score =  174 bits (440), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 96/202 (47%), Positives = 128/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  EG  IPVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEEGVSIPVTVIEIEANRVTQVKTLENDGYRAVQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L EFR+  D +   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRVLREFRLA-DSEEFAVGQDISVEVFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|261866795|ref|YP_003254717.1| 50S ribosomal protein L3 [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|315633455|ref|ZP_07888745.1| 50S ribosomal protein L3 [Aggregatibacter segnis ATCC 33393]
 gi|261412127|gb|ACX81498.1| ribosomal protein L3 [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|315477497|gb|EFU68239.1| 50S ribosomal protein L3 [Aggregatibacter segnis ATCC 33393]
          Length = 208

 Score =  174 bits (440), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/209 (46%), Positives = 132/209 (63%), Gaps = 3/209 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT ++N +G  +PVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+K
Sbjct: 3   GLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKASRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V   + L+EFR + ++    +G   +   F   + VDVTG + GKGF G 
Sbjct: 63  PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQGG 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV VD
Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGNERVTVQSLEVVRVD 180

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 AERKLLLVKGAVPGA-TGSDVIVKPAVKA 208


>gi|171060669|ref|YP_001793018.1| 50S ribosomal protein L3 [Leptothrix cholodnii SP-6]
 gi|212288405|sp|B1Y8I7|RL3_LEPCP RecName: Full=50S ribosomal protein L3
 gi|170778114|gb|ACB36253.1| ribosomal protein L3 [Leptothrix cholodnii SP-6]
          Length = 226

 Score =  173 bits (439), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/212 (46%), Positives = 131/212 (61%), Gaps = 4/212 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ RK+GM  ++  +G  +PVTVL + N +V   +T++ +GY AVQV  G  K   V
Sbjct: 9   RLGLLGRKVGMMRIFTDDGDAVPVTVLDVSNNRVAQIKTVETDGYSAVQVAFGARKASRV 68

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKD--DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP  G  +   V   + L EFRV  +   +  P GS    + F  GQ VDV G TIGKG
Sbjct: 69  TKPEAGHLAKAGVESGELLQEFRVSAEVAAECKP-GSQLPIAMFQAGQQVDVQGTTIGKG 127

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRH+FG  RA+HG S SH   GS    QDPGRVF  KKM+G +G + VT +NL+V
Sbjct: 128 FAGTIKRHHFGSQRASHGNSRSHNVPGSISMAQDPGRVFPGKKMSGHLGDDTVTTQNLDV 187

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD+ R L+LVKG VPGA K  ++ VR + K
Sbjct: 188 VRVDEARQLLLVKGAVPGA-KGGFVTVRPAVK 218


>gi|300718705|ref|YP_003743508.1| 50S ribosomal protein L3 [Erwinia billingiae Eb661]
 gi|299064541|emb|CAX61661.1| 50S ribosomal protein L3 [Erwinia billingiae Eb661]
          Length = 209

 Score =  173 bits (439), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 93/195 (47%), Positives = 128/195 (65%), Gaps = 1/195 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   ++L+ +GY A+QV AG  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYTAIQVTAGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR  + D+   VG   +   F+  + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRTVEGDEF-AVGQSINVDIFSDVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGA 198
            +R L+LVKG VPGA
Sbjct: 182 AERNLLLVKGAVPGA 196


>gi|297201729|ref|ZP_06919126.1| 50S ribosomal protein L3 [Streptomyces sviceus ATCC 29083]
 gi|197710896|gb|EDY54930.1| 50S ribosomal protein L3 [Streptomyces sviceus ATCC 29083]
          Length = 214

 Score =  173 bits (439), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 96/210 (45%), Positives = 127/210 (60%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+K
Sbjct: 7   GILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDADGYESVQIAFGEIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G 
Sbjct: 67  PLKGHFAKADVTPRRHLVEIRTA-DASEYTLGQEITAEVFEAGIKVDVTGKSKGKGFAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +VD
Sbjct: 126 MKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++GL+L+KG VPG      +LVR + K A
Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214


>gi|194099923|ref|YP_002003061.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae NCCP11945]
 gi|193935213|gb|ACF31037.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae NCCP11945]
 gi|317165376|gb|ADV08917.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 203

 Score =  173 bits (439), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/201 (48%), Positives = 126/201 (62%), Gaps = 2/201 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   V+K   G F+ 
Sbjct: 1   MTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANRVNKAEAGHFAK 60

Query: 72  VNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
             V   + L EF + ++    L  G   + S F VGQLVDVTG + GKGFSG +KRHNFG
Sbjct: 61  AGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKGFSGTIKRHNFG 120

Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
             R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEVV VD +R L+L
Sbjct: 121 AQRTSHGNSRSHRVPGSIGVAQDPGRVFPGKRMAGQYGNTKATVQKLEVVRVDAERQLLL 180

Query: 191 VKGCVPGAKKNSWILVRDSFK 211
           VKG VPGA  NS ++VR S K
Sbjct: 181 VKGAVPGA-VNSDVVVRPSVK 200


>gi|290958151|ref|YP_003489333.1| 50S ribosomal protein L3 [Streptomyces scabiei 87.22]
 gi|260647677|emb|CBG70782.1| 50S ribosomal protein L3 [Streptomyces scabiei 87.22]
          Length = 214

 Score =  173 bits (439), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/210 (46%), Positives = 127/210 (60%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+K
Sbjct: 7   GILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+  +V+P++ L E R   D     +G   S   F  G  VDVTG + GKGF+G 
Sbjct: 67  PLKGHFAKADVTPRRHLVEIRTA-DASEYTLGQEISAEVFEAGVKVDVTGKSKGKGFAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +VD
Sbjct: 126 MKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++GL+L+KG VPG      +LVR + K A
Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214


>gi|163840906|ref|YP_001625311.1| 50S ribosomal protein L3 [Renibacterium salmoninarum ATCC 33209]
 gi|189029475|sp|A9WSV9|RL3_RENSM RecName: Full=50S ribosomal protein L3
 gi|162954382|gb|ABY23897.1| LSU ribosomal protein L3P [Renibacterium salmoninarum ATCC 33209]
          Length = 220

 Score =  173 bits (439), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 92/211 (43%), Positives = 127/211 (60%), Gaps = 2/211 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   + +PVTV+  D+  V   R   K+GY AVQ+G G+   + V+K
Sbjct: 9   GILGTKLGMTQVWDENNKLVPVTVVQADSNVVTQLRDAAKDGYTAVQIGYGQIDPRKVTK 68

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+P++ + E R   D D   +G   S   F  GQ VDV G + GKGF+G 
Sbjct: 69  PLAGHFEKAGVTPRRHVVELRTN-DSDAYSLGQELSVEIFEAGQKVDVVGTSKGKGFAGV 127

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G+ A+HG   +HR  GS G    P RVFK  KMAGRMGG R T  NL V ++D
Sbjct: 128 MKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGLKMAGRMGGERHTTLNLTVHAID 187

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            ++ L+L+KG +PGA +   +LVR + K+ V
Sbjct: 188 AEKSLLLIKGAIPGA-RGRVVLVRTAVKTTV 217


>gi|254362074|ref|ZP_04978199.1| ribosomal protein L3 [Mannheimia haemolytica PHL213]
 gi|261493009|ref|ZP_05989551.1| ribosomal protein L3 [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261495171|ref|ZP_05991634.1| ribosomal protein L3 [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|153093630|gb|EDN74595.1| ribosomal protein L3 [Mannheimia haemolytica PHL213]
 gi|261309147|gb|EEY10387.1| ribosomal protein L3 [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261311353|gb|EEY12514.1| ribosomal protein L3 [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 209

 Score =  173 bits (439), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/209 (46%), Positives = 132/209 (63%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   V+K
Sbjct: 3   GLIGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDGYSAIQVTTGSKKASRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V   + L+EFR  + ++   +G   +   FT  + VDVTG + GKGF G 
Sbjct: 63  PEAGHFVKAGVEAGRGLWEFRTTEGEEF-TLGQEINVDIFTDVKKVDVTGTSKGKGFQGG 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+LVKG VPGA  N  ++V+ + K+
Sbjct: 182 VERKLLLVKGAVPGA-TNGDVIVKPAVKA 209


>gi|148827966|ref|YP_001292719.1| 50S ribosomal protein L3 [Haemophilus influenzae PittGG]
 gi|166233148|sp|A5UHT0|RL3_HAEIG RecName: Full=50S ribosomal protein L3
 gi|148719208|gb|ABR00336.1| 50S ribosomal protein L3 [Haemophilus influenzae PittGG]
          Length = 208

 Score =  173 bits (439), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/209 (46%), Positives = 132/209 (63%), Gaps = 3/209 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT ++N +G  +PVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+K
Sbjct: 3   GLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V   + L+EFR + ++    +G   +   F   + VDVTG + GKGF G 
Sbjct: 63  PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQGG 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV VD
Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 180

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+LVKG VPGA  N  ++V+ + K+
Sbjct: 181 AERKLLLVKGSVPGA-INGNVIVKPAVKA 208


>gi|16272718|ref|NP_438936.1| 50S ribosomal protein L3 [Haemophilus influenzae Rd KW20]
 gi|68249373|ref|YP_248485.1| 50S ribosomal protein L3 [Haemophilus influenzae 86-028NP]
 gi|145630522|ref|ZP_01786302.1| acetyl-CoA:acetoacetyl-CoA transferase subunit alpha [Haemophilus
           influenzae R3021]
 gi|145632130|ref|ZP_01787865.1| acetyl-CoA:acetoacetyl-CoA transferase subunit alpha [Haemophilus
           influenzae 3655]
 gi|145634812|ref|ZP_01790520.1| 50S ribosomal protein L3 [Haemophilus influenzae PittAA]
 gi|145636667|ref|ZP_01792334.1| 50S ribosomal protein L3 [Haemophilus influenzae PittHH]
 gi|145638423|ref|ZP_01794033.1| 50S ribosomal protein L3 [Haemophilus influenzae PittII]
 gi|229844644|ref|ZP_04464783.1| 50S ribosomal protein L3 [Haemophilus influenzae 6P18H1]
 gi|229845827|ref|ZP_04465939.1| 50S ribosomal protein L3 [Haemophilus influenzae 7P49H1]
 gi|260579868|ref|ZP_05847698.1| 50S ribosomal protein L3 [Haemophilus influenzae RdAW]
 gi|260581595|ref|ZP_05849392.1| 50S ribosomal protein L3 [Haemophilus influenzae NT127]
 gi|319775289|ref|YP_004137777.1| 50S ribosomal subunit protein L3 [Haemophilus influenzae F3047]
 gi|319897729|ref|YP_004135926.1| 50S ribosomal subunit protein l3 [Haemophilus influenzae F3031]
 gi|325577127|ref|ZP_08147611.1| 50S ribosomal protein L3 [Haemophilus parainfluenzae ATCC 33392]
 gi|1173047|sp|P44344|RL3_HAEIN RecName: Full=50S ribosomal protein L3
 gi|81336200|sp|Q4QMC2|RL3_HAEI8 RecName: Full=50S ribosomal protein L3
 gi|1573787|gb|AAC22436.1| ribosomal protein L3 (rpL3) [Haemophilus influenzae Rd KW20]
 gi|68057572|gb|AAX87825.1| 50S ribosomal protein L3 [Haemophilus influenzae 86-028NP]
 gi|144983912|gb|EDJ91354.1| acetyl-CoA:acetoacetyl-CoA transferase subunit alpha [Haemophilus
           influenzae R3021]
 gi|144987037|gb|EDJ93567.1| acetyl-CoA:acetoacetyl-CoA transferase subunit alpha [Haemophilus
           influenzae 3655]
 gi|145267978|gb|EDK07974.1| 50S ribosomal protein L3 [Haemophilus influenzae PittAA]
 gi|145270193|gb|EDK10129.1| 50S ribosomal protein L3 [Haemophilus influenzae PittHH]
 gi|145272752|gb|EDK12659.1| 50S ribosomal protein L3 [Haemophilus influenzae PittII]
 gi|229810831|gb|EEP46548.1| 50S ribosomal protein L3 [Haemophilus influenzae 7P49H1]
 gi|229812358|gb|EEP48048.1| 50S ribosomal protein L3 [Haemophilus influenzae 6P18H1]
 gi|260093152|gb|EEW77085.1| 50S ribosomal protein L3 [Haemophilus influenzae RdAW]
 gi|260095188|gb|EEW79079.1| 50S ribosomal protein L3 [Haemophilus influenzae NT127]
 gi|301155330|emb|CBW14796.1| 50S ribosomal subunit protein L3 [Haemophilus parainfluenzae T3T1]
 gi|301169494|emb|CBW29095.1| 50S ribosomal subunit protein L3 [Haemophilus influenzae 10810]
 gi|309751562|gb|ADO81546.1| 50S ribosomal protein L3 [Haemophilus influenzae R2866]
 gi|309973732|gb|ADO96933.1| 50S ribosomal protein L3 [Haemophilus influenzae R2846]
 gi|317433235|emb|CBY81610.1| 50S ribosomal subunit protein L3 [Haemophilus influenzae F3031]
 gi|317449880|emb|CBY86091.1| 50S ribosomal subunit protein L3 [Haemophilus influenzae F3047]
 gi|325160709|gb|EGC72830.1| 50S ribosomal protein L3 [Haemophilus parainfluenzae ATCC 33392]
          Length = 208

 Score =  173 bits (439), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/209 (46%), Positives = 132/209 (63%), Gaps = 3/209 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT ++N +G  +PVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+K
Sbjct: 3   GLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V   + L+EFR + ++    +G   +   F   + VDVTG + GKGF G 
Sbjct: 63  PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQGG 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV VD
Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 180

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+LVKG VPGA  N  ++V+ + K+
Sbjct: 181 AERKLLLVKGSVPGA-INGDVIVKPAVKA 208


>gi|302877801|ref|YP_003846365.1| 50S ribosomal protein L3 [Gallionella capsiferriformans ES-2]
 gi|302580590|gb|ADL54601.1| 50S ribosomal protein L3 [Gallionella capsiferriformans ES-2]
          Length = 214

 Score =  173 bits (439), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/213 (46%), Positives = 131/213 (61%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V+  +G  +PVTVL + N +V   +++  +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKIGMTRVFTEDGSSLPVTVLEVSNNRVTQVKSVAVDGYTAVQVAHGVRRATR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           VSK   G ++   V     L EF V  +  D L +GS  S   F VGQLVDVTG T GKG
Sbjct: 61  VSKAAAGHYAKAGVEAGSALKEFIVTPEQLDGLALGSSISVEIFQVGQLVDVTGTTKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KRH+F   RA+HG S SH   GS G  QDPGRVF  K+M G +G  + TV+NL++
Sbjct: 121 YAGTIKRHHFKSGRASHGNSKSHNVPGSIGMAQDPGRVFPGKRMTGHLGDEQRTVQNLQI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD  R L+LVKG VPG   NS I+VR + K+
Sbjct: 181 VRVDVARQLLLVKGAVPGC-TNSKIIVRPAVKA 212


>gi|197287068|ref|YP_002152940.1| 50S ribosomal protein L3 [Proteus mirabilis HI4320]
 gi|227354934|ref|ZP_03839348.1| 50S ribosomal protein L3 [Proteus mirabilis ATCC 29906]
 gi|226730550|sp|B4F1I4|RL3_PROMH RecName: Full=50S ribosomal protein L3
 gi|194684555|emb|CAR46379.1| 50S ribosomal protein L3 [Proteus mirabilis HI4320]
 gi|227165016|gb|EEI49855.1| 50S ribosomal protein L3 [Proteus mirabilis ATCC 29906]
          Length = 209

 Score =  173 bits (439), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 95/202 (47%), Positives = 129/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++N +V   + L+K+GY A+QV  G  K   V K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKDLEKDGYRAIQVTTGSKKANRVLK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L EFR+ + ++   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRLLREFRLNEGEEYT-VGQSISVEIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG++G  +VTV++LEVV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGQLGNEQVTVQSLEVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|296268550|ref|YP_003651182.1| 50S ribosomal protein L3 [Thermobispora bispora DSM 43833]
 gi|296091337|gb|ADG87289.1| ribosomal protein L3 [Thermobispora bispora DSM 43833]
          Length = 218

 Score =  173 bits (439), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 94/214 (43%), Positives = 128/214 (59%), Gaps = 2/214 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+ +KLGMT V++   R +PVTV+    C V   RT +K+GY A+Q+G G+   + V+K
Sbjct: 7   GVLGKKLGMTQVFDEANRVVPVTVVEAGPCVVTRVRTPEKDGYSAIQLGYGQIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+  +    N++P++   E R   D     +G   +   F  G  VDVTG + GKGF+G 
Sbjct: 67  PLGDYLRKHNITPRRYFAEIRTD-DASEYTLGQEITVDIFQPGDYVDVTGRSKGKGFAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GL  +HG    HRS GS G    PGRVFK  +MAGRMG  R TV+NL+V +VD
Sbjct: 126 MKRHGFRGLGGSHGTQRKHRSPGSIGACATPGRVFKGLRMAGRMGNARTTVQNLKVQAVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
            ++ LILVKG +PGA   S +L+R + K     K
Sbjct: 186 AEKNLILVKGAIPGA-NGSLVLIRTAVKKGAAAK 218


>gi|117619475|ref|YP_854839.1| ribosomal protein L3 [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|166233112|sp|A0KF21|RL3_AERHH RecName: Full=50S ribosomal protein L3
 gi|117560882|gb|ABK37830.1| ribosomal protein L3 [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 210

 Score =  173 bits (439), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 95/212 (44%), Positives = 132/212 (62%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+ ++  +V   ++++ +GY A+QV  G  K   
Sbjct: 1   MTIGLVGRKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKSVETDGYNAIQVTTGAKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP  G F+   V   + L+EFR+  + +   VGS          +LVDVTG + GKGF
Sbjct: 61  VTKPEAGHFAKAGVEAGRGLWEFRLN-NGETFTVGSELKVDLLADVKLVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF     THG S+SHR  GS G  Q PGRVFK KKMAG MG  RVT +NLE+V
Sbjct: 120 AGTVKRWNFRTQDMTHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGHMGAERVTTQNLELV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA  N  ++V+ + K+
Sbjct: 180 RVDAERNLLLIKGAVPGA-TNGNVIVKPAVKA 210


>gi|251793827|ref|YP_003008559.1| 50S ribosomal protein L3 [Aggregatibacter aphrophilus NJ8700]
 gi|247535226|gb|ACS98472.1| ribosomal protein L3 [Aggregatibacter aphrophilus NJ8700]
          Length = 208

 Score =  173 bits (439), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/209 (46%), Positives = 132/209 (63%), Gaps = 3/209 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT ++N +G  +PVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+K
Sbjct: 3   GLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKASRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V   + L+EFR + ++    +G   +   F   + VDVTG + GKGF G 
Sbjct: 63  PEVGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQGG 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV VD
Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 180

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 AERKLLLVKGAVPGA-TGSDVIVKPAVKA 208


>gi|15603280|ref|NP_246354.1| 50S ribosomal protein L3 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|42559689|sp|Q9CL32|RL3_PASMU RecName: Full=50S ribosomal protein L3
 gi|12721790|gb|AAK03499.1| RpL3 [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 209

 Score =  173 bits (438), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 96/209 (45%), Positives = 133/209 (63%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT ++N +G  IPVTV+ ++  +V   +T++ +GY A+QV  G  K   V+K
Sbjct: 3   GLVGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTVETDGYSAIQVTTGSKKASRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V   + L+EFR  + ++   +G   +   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFVKAGVEAGRGLWEFRTTEGEEF-TLGQEINVDIFADVKKVDVTGTSKGKGFAGG 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGNERVTVQSLEVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+LVKG VPGA  N  ++V+ + K+
Sbjct: 182 AERKLLLVKGAVPGA-TNGDVIVKPAVKA 209


>gi|19114797|ref|NP_593885.1| mitochondrial ribosomal protein subunit L9 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|74665370|sp|Q9P6P6|RM09_SCHPO RecName: Full=60S ribosomal protein L9, mitochondrial; Flags:
           Precursor
 gi|7708596|emb|CAB90144.1| mitochondrial ribosomal protein subunit L9 (predicted)
           [Schizosaccharomyces pombe]
          Length = 259

 Score =  173 bits (438), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/217 (44%), Positives = 134/217 (61%), Gaps = 2/217 (0%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R GV+  K GMT  ++ + G ++P+T+L  D  Q +  RT +K+GY AVQVG+G  K K
Sbjct: 42  LRPGVILVKKGMTNAWDEKTGMQVPLTILQFDRVQAIDVRTKEKHGYYAVQVGSGIRKPK 101

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +++K  +G F S N+ PK  + EFRV+    L+  G++F+  YF   Q VDV G+T GKG
Sbjct: 102 SITKAEQGNFFSHNIYPKMHVREFRVRDASGLVSPGTIFTTDYFKPKQYVDVKGITKGKG 161

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKR  F G  A+HG S+SHR+ GSTG    P RV   +KMAG MG    TVKNL V
Sbjct: 162 FAGVMKRWGFSGGNASHGASLSHRTPGSTGQNTTPSRVLPGRKMAGHMGHRSRTVKNLLV 221

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            +VD     ILVKG +PG  K++ + V D+   + + 
Sbjct: 222 WAVDADLECILVKGSIPGPNKSA-VYVTDTINRSTSA 257


>gi|293391695|ref|ZP_06636029.1| ribosomal protein L3 [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290952229|gb|EFE02348.1| ribosomal protein L3 [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 208

 Score =  173 bits (438), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 97/209 (46%), Positives = 132/209 (63%), Gaps = 3/209 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT ++N +G  +PVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+K
Sbjct: 3   GLVGRKVGMTRIFNEDGVSVPVTVIEVEANRVTQVKTLENDGYTAVQVTTGSKKASRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V   + L+EFR + ++    +G   +   F   + VDVTG + GKGF G 
Sbjct: 63  PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQGG 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV VD
Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGNERVTVQSLEVVRVD 180

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 AERKLLLVKGAVPGA-TGSDVIVKPAVKA 208


>gi|56417003|ref|YP_154077.1| 50S ribosomal protein L3 [Anaplasma marginale str. St. Maries]
 gi|222475371|ref|YP_002563788.1| 50S ribosomal protein L3 (rplC) [Anaplasma marginale str. Florida]
 gi|254995180|ref|ZP_05277370.1| 50S ribosomal protein L3 [Anaplasma marginale str. Mississippi]
 gi|255003354|ref|ZP_05278318.1| 50S ribosomal protein L3 [Anaplasma marginale str. Puerto Rico]
 gi|255004478|ref|ZP_05279279.1| 50S ribosomal protein L3 [Anaplasma marginale str. Virginia]
 gi|56388235|gb|AAV86822.1| 50S ribosomal protein L3 [Anaplasma marginale str. St. Maries]
 gi|222419509|gb|ACM49532.1| 50S ribosomal protein L3 (rplC) [Anaplasma marginale str. Florida]
          Length = 232

 Score =  173 bits (438), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/220 (48%), Positives = 138/220 (62%), Gaps = 5/220 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ +K+G T V+   G R+PVT+L L++  VV  ++ D +GY AV +G    +   +
Sbjct: 6   RVGLLMKKVGSTAVFGDAGARVPVTLLLLEDTFVVDVKSRDVHGYNAVVLGV--RRPGRL 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP         +     LFE RV   D + P G V    +F  GQ VDV G +IG+GF+
Sbjct: 64  NKPQICALRKKGIDVDCHLFESRVDTVDGVEPGGRVLVDHFFQ-GQFVDVAGRSIGRGFA 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNFGGLRA+HGVSISHRS GSTG  QDPGRVFK KKMAG MG     V+NL VV 
Sbjct: 123 GVMKRHNFGGLRASHGVSISHRSQGSTGQCQDPGRVFKGKKMAGHMGHTMSVVQNLRVVL 182

Query: 182 VDDKRGLILVKGC-VPGAKKNSWILVRDSFKSAVNCKGKV 220
           VD +R L++V+G  VPG    S++LVRD+ K  V  +G V
Sbjct: 183 VDSERSLLVVEGTNVPGP-CGSYVLVRDAVKKPVPREGGV 221


>gi|284006163|emb|CBA71405.1| 50S ribosomal protein L3 [Arsenophonus nasoniae]
          Length = 209

 Score =  173 bits (438), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 93/202 (46%), Positives = 131/202 (64%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++N +V   ++L+ +GY A+QV  G  K   V K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKSLETDGYNAIQVTTGSKKANRVKK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L EFR+ ++++   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRILREFRLSENEEFT-VGQSISVEIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  ++ I+
Sbjct: 182 AERNLLLVKGAVPGATGSNLIV 203


>gi|94676516|ref|YP_588776.1| ribosomal protein L3 [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|123260557|sp|Q1LTD8|RL3_BAUCH RecName: Full=50S ribosomal protein L3
 gi|94219666|gb|ABF13825.1| ribosomal protein L3 [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 212

 Score =  173 bits (438), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 83/202 (41%), Positives = 128/202 (63%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT ++  EG  IP+T++ ++   +   +++  +GY A QV  G  K   V K
Sbjct: 3   GLIGRKIGMTRIFTDEGISIPITIIQVEPNIITQVKSIQTDGYYAYQVTTGTKKPNLVIK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+       + L+EFR++ ++  + +G + +  YFT  + VD+TG + GKGFSG 
Sbjct: 63  PEAGHFAKAGTKAGRSLWEFRLKHEEKPINIGEILTLEYFTNIKKVDITGTSKGKGFSGT 122

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    A+HG S+SHR  GS G  Q PG+VFK KKMAG MG  RVT++NL+++ +D
Sbjct: 123 VKRWNFHMQDASHGNSLSHRVTGSIGQNQTPGKVFKGKKMAGHMGNKRVTIQNLDIIRID 182

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            ++ L+L+KG +PGA  N  I+
Sbjct: 183 LRKNLLLIKGAIPGAPGNDLII 204


>gi|255722617|ref|XP_002546243.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
 gi|240136732|gb|EER36285.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
          Length = 279

 Score =  173 bits (438), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 94/210 (44%), Positives = 128/210 (60%), Gaps = 1/210 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+ A K GM   +   G  IP TVL +D+C+V+  +  +  GY ++ VG+ +    N 
Sbjct: 57  RPGLFAIKRGMITWFRESGEAIPATVLEIDSCEVINSKNSEDYGYDSILVGSIDKLKNNK 116

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            +     F    +SPK K+ EFRV K D+L+  G+  +  YF VGQ VD+ G+T GKGF+
Sbjct: 117 YETSIKMFEDAGISPKYKIGEFRVLKSDNLIEKGTELTADYFEVGQKVDIKGITKGKGFA 176

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR  F G RATHGVS +HR+ G+ G  Q+PGRV   KKM GRMG N  T  NLEV+ 
Sbjct: 177 GVMKRWGFSGGRATHGVSKAHRTPGAMGGNQNPGRVLPGKKMPGRMGCNNKTEFNLEVLF 236

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            D + G+++VKG VPG K+   + VRD+ K
Sbjct: 237 TDKEAGVLIVKGNVPGPKR-GIVRVRDAIK 265


>gi|329122783|ref|ZP_08251355.1| 50S ribosomal protein L3 [Haemophilus aegyptius ATCC 11116]
 gi|327472047|gb|EGF17485.1| 50S ribosomal protein L3 [Haemophilus aegyptius ATCC 11116]
          Length = 208

 Score =  173 bits (438), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 97/209 (46%), Positives = 132/209 (63%), Gaps = 3/209 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT ++N +G  +PVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+K
Sbjct: 3   GLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSRKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V   + L+EFR + ++    +G   +   F   + VDVTG + GKGF G 
Sbjct: 63  PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQGG 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV VD
Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 180

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+LVKG VPGA  N  ++V+ + K+
Sbjct: 181 AERKLLLVKGSVPGA-INGDVIVKPAVKA 208


>gi|242237859|ref|YP_002986040.1| ribosomal protein L3 [Dickeya dadantii Ech703]
 gi|242129916|gb|ACS84218.1| ribosomal protein L3 [Dickeya dadantii Ech703]
          Length = 209

 Score =  173 bits (438), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 95/202 (47%), Positives = 129/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKTLENDGYRAVQVTTGAKKANRVNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L EFR+ + +D   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRTLREFRLAEGEDF-AVGQNISVEIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|256831827|ref|YP_003160554.1| 50S ribosomal protein L3 [Jonesia denitrificans DSM 20603]
 gi|256685358|gb|ACV08251.1| ribosomal protein L3 [Jonesia denitrificans DSM 20603]
          Length = 219

 Score =  173 bits (438), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 93/209 (44%), Positives = 128/209 (61%), Gaps = 2/209 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           V+ +KLGMT V++  GR +PVTV+ ++   V   RT+D +GY AVQV  G+   + V+KP
Sbjct: 13  VLGKKLGMTQVWDEAGRLVPVTVVAVEPNVVTQIRTVDNDGYAAVQVATGQIDPRKVTKP 72

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           ++G F    V+P++ + E R   D     +G   +   F  G  VDV G T GKGF+G M
Sbjct: 73  LKGHFEKAGVTPRRHVTEIRTS-DSGEYSLGQEVTVGVFEAGTKVDVIGTTKGKGFAGVM 131

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH F G  A+HG   +HR  GS G    P RVFK  +MAGRMG +R+TV+NL V +VD 
Sbjct: 132 KRHGFAGASASHGAHRNHRKPGSIGAAATPSRVFKGLRMAGRMGHDRMTVQNLTVHAVDA 191

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +G +L+KG VPG  K   +LVR++ K A
Sbjct: 192 DKGYVLLKGAVPGP-KGGVVLVRNAVKGA 219


>gi|158317791|ref|YP_001510299.1| ribosomal protein L3 [Frankia sp. EAN1pec]
 gi|226725178|sp|A8LC56|RL3_FRASN RecName: Full=50S ribosomal protein L3
 gi|158113196|gb|ABW15393.1| ribosomal protein L3 [Frankia sp. EAN1pec]
          Length = 236

 Score =  173 bits (438), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 91/194 (46%), Positives = 120/194 (61%), Gaps = 1/194 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      V   +T D +GY AVQ+G GE   + ++K
Sbjct: 8   GLLGTKLGMTQVWDANNRVVPVTVIQAGPNVVTQVKTPDSDGYSAVQLGYGEIDPRRINK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           PMRG F +   +P++ L E R     +  P G   +   F  GQ+VDVTG + GKGF+G 
Sbjct: 68  PMRGHFETSGATPRRHLVELRTADAGNYRP-GQQLTGEVFDAGQVVDVTGTSKGKGFAGV 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GL A HGV   HRS GS G    PGRVFK  +MAGRMG +RVTV  L + +VD
Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGHDRVTVAGLTIHAVD 186

Query: 184 DKRGLILVKGCVPG 197
            +RG +L+KG +PG
Sbjct: 187 TERGFLLIKGAIPG 200


>gi|254412263|ref|ZP_05026038.1| ribosomal protein L3 [Microcoleus chthonoplastes PCC 7420]
 gi|196181229|gb|EDX76218.1| ribosomal protein L3 [Microcoleus chthonoplastes PCC 7420]
          Length = 211

 Score =  173 bits (438), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 92/197 (46%), Positives = 123/197 (62%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT V++ EGR +PVTV+    C+V   +T   +GY AVQ+G  E K K 
Sbjct: 1   MSVGILGTKLGMTQVFDEEGRALPVTVVQAGPCRVTQIKTKQTDGYSAVQLGYHEVKEKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G  +     P + L E+R+   D+   +G V +   F+ GQLVDV+G TIG+GF
Sbjct: 61  VNKPEKGHLAKSEAPPLRHLREYRLDNTDEFQ-LGQVINAEIFSAGQLVDVSGNTIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRHNF      HG S +HR  GSTG    PGR F  KKMAGR GG R T++ L+VV
Sbjct: 120 AGYQKRHNFKRGPMAHG-SKNHRLPGSTGAGTTPGRTFPGKKMAGRYGGKRQTIRKLQVV 178

Query: 181 SVDDKRGLILVKGCVPG 197
            VD +R L+++KG VPG
Sbjct: 179 RVDTERNLLIIKGAVPG 195


>gi|268593541|ref|ZP_06127762.1| 50S ribosomal protein L3 [Providencia rettgeri DSM 1131]
 gi|291310819|gb|EFE51272.1| 50S ribosomal protein L3 [Providencia rettgeri DSM 1131]
          Length = 209

 Score =  172 bits (437), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 94/202 (46%), Positives = 129/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++N +V   +T + +GY A+QV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKTAETDGYNAIQVTTGSKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L EFR++ D     VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRILREFRIE-DSAEYTVGQSISVEIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  ++ I+
Sbjct: 182 AERNLLLVKGAVPGATGSNLIV 203


>gi|74316423|ref|YP_314163.1| 50S ribosomal protein L3P [Thiobacillus denitrificans ATCC 25259]
 gi|109893570|sp|Q3SLP9|RL3_THIDA RecName: Full=50S ribosomal protein L3
 gi|74055918|gb|AAZ96358.1| ribosomal protein L3 [Thiobacillus denitrificans ATCC 25259]
          Length = 214

 Score =  172 bits (437), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/213 (46%), Positives = 129/213 (60%), Gaps = 4/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++   G  +PVTVL + N +V   RT + +GY AVQV  G  +   
Sbjct: 1   MSIGLVGRKVGMTRIFTENGASVPVTVLEMSNNRVTQVRTPENDGYSAVQVAYGSRRNSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD--DDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           V+K   G ++   V   + L EFRV  D      P G+  S   F  GQ VDVTG+T GK
Sbjct: 61  VNKSEAGHYAKAGVDAGELLREFRVAADVAAQYQP-GAAVSVEVFQAGQKVDVTGVTQGK 119

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF+G +KRHNF   RA+HG S SH   GS G  QDPGRVF  K+M+G MG    T +NLE
Sbjct: 120 GFAGTIKRHNFKSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMSGHMGAVSCTKQNLE 179

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           VV VD +RGL+L+KG VPG+ K   ++VR + K
Sbjct: 180 VVRVDAERGLVLLKGAVPGS-KGGHVVVRPAVK 211


>gi|258543821|ref|ZP_05704055.1| 50S ribosomal protein L3 [Cardiobacterium hominis ATCC 15826]
 gi|258520910|gb|EEV89769.1| 50S ribosomal protein L3 [Cardiobacterium hominis ATCC 15826]
          Length = 216

 Score =  172 bits (437), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 94/213 (44%), Positives = 132/213 (61%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V +K+GMT ++N +G    VTV+ +    +   +TL  +GY AVQV  GE K   
Sbjct: 5   MTMGLVGQKIGMTRIFNEDGSACAVTVIEVKPNIISQIKTLATDGYNAVQVSVGERKTNR 64

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            SK + G F+  NV+    + EFR+  +D     +GS    S F+ GQ VDV G ++GKG
Sbjct: 65  TSKGLAGHFAKANVAAGVVIKEFRIAAEDVAQFSLGSAVDVSLFSEGQRVDVRGRSVGKG 124

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRH+F G R THG S+SHR  GS G  Q PGRVFK KKM+G +G    + +NLE+
Sbjct: 125 FAGTIKRHHFSGQRKTHGNSLSHRVPGSIGQNQTPGRVFKGKKMSGHLGNKMRSTQNLEI 184

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
             VD +R L+L+KG VPGA K  ++++R S K+
Sbjct: 185 ARVDGERNLLLIKGAVPGA-KGGFVVIRPSVKA 216


>gi|88854682|ref|ZP_01129348.1| 50S ribosomal protein L3 [marine actinobacterium PHSC20C1]
 gi|88815843|gb|EAR25699.1| 50S ribosomal protein L3 [marine actinobacterium PHSC20C1]
          Length = 216

 Score =  172 bits (437), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 92/210 (43%), Positives = 130/210 (61%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT V++   + +PVTV+ +    V   RT + +GY AVQ+  G+   + V+K
Sbjct: 9   GLLGKKLGMTQVWDENNKLVPVTVVEITPNVVTQLRTPEVDGYSAVQIAYGQIDPRKVNK 68

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+P++ + E R     D   VG   +   FT G  VDV G + GKGF+G 
Sbjct: 69  PLTGHFDKAGVTPRRHITEIRTSDAADYT-VGQELAVDIFTPGSKVDVVGTSKGKGFAGV 127

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF G+ A+HG   +HR  GS G    P RVFK  +MAGRMGG+RVTV NL V ++D
Sbjct: 128 MKRHNFKGVSASHGSHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGDRVTVMNLAVHAID 187

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++GL+L+KG VPGA +   + VR++ K A
Sbjct: 188 LEKGLVLIKGAVPGA-RGRIVFVRNAVKGA 216


>gi|297564037|ref|YP_003683010.1| 50S ribosomal protein L3 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296848486|gb|ADH70504.1| 50S ribosomal protein L3 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 216

 Score =  172 bits (437), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 97/208 (46%), Positives = 127/208 (61%), Gaps = 2/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+  KLGMT V++  G+ +PVTVL    C V   RT D +GY A+Q+G G+   + V+K
Sbjct: 8   GVLGEKLGMTQVFDDAGKMVPVTVLKAGPCVVSRIRTPDTDGYSAIQLGYGQINPRKVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+  +  + +++P++   E R   D     +G   +   F  GQ VDVTG + GKGF+G 
Sbjct: 68  PLGDYLRAHDLTPRRHYVEVRTT-DATEYTLGQEVTADSFETGQKVDVTGKSKGKGFAGV 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GL A+HG    HRS GS G    PGRVFK  +MAGRMG  R TV+NL V SVD
Sbjct: 127 MKRHGFRGLSASHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNVRKTVQNLTVHSVD 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            ++GLILVKG VPG      +LVR + K
Sbjct: 187 AEKGLILVKGAVPGP-NGGLVLVRTAVK 213


>gi|85060256|ref|YP_455958.1| 50S ribosomal protein L3 [Sodalis glossinidius str. 'morsitans']
 gi|109893557|sp|Q2NQM2|RL3_SODGM RecName: Full=50S ribosomal protein L3
 gi|84780776|dbj|BAE75553.1| 50S ribosomal protein L3 [Sodalis glossinidius str. 'morsitans']
          Length = 209

 Score =  172 bits (437), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 94/202 (46%), Positives = 129/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT ++  +G  IPVTV+ ++  +V   + L+ +GY A+QV AG  K   V K
Sbjct: 3   GLIGRKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLENDGYRAIQVTAGTKKANRVIK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFRV+ D + + VG   +   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRVE-DGEEVTVGQSITVELFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA     I+
Sbjct: 182 VERNLLLVKGAVPGATGGDLIV 203


>gi|329898794|ref|ZP_08272466.1| LSU ribosomal protein L3p (L3e) [gamma proteobacterium IMCC3088]
 gi|328920746|gb|EGG28208.1| LSU ribosomal protein L3p (L3e) [gamma proteobacterium IMCC3088]
          Length = 211

 Score =  172 bits (437), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 98/212 (46%), Positives = 129/212 (60%), Gaps = 1/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT V+  +G  IPVTV+ +   +V   + LD +GY A+QV  G  K   
Sbjct: 1   MTIGLVGRKTGMTRVFTEDGVSIPVTVVEVSPNRVTQIKELDADGYRAIQVTTGTRKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G ++   V     L+EFR++  +D   VG+  +   F VGQ VDV G + GKGF
Sbjct: 61  VNKSAAGHYAKAGVEAGVGLWEFRLEAGEDAPEVGAELTVGRFEVGQKVDVAGKSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF    ATHG S+SHR+ GS G  Q PGRVFK KKMAG+MG   VT + LEVV
Sbjct: 121 QGGVKRWNFKMQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGQMGNVAVTTQGLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA     ++VR + K+
Sbjct: 181 RVDAERNLLLIKGAVPGAPGGD-VVVRPAVKA 211


>gi|88801219|ref|ZP_01116760.1| 50S ribosomal protein L3 [Reinekea sp. MED297]
 gi|88776057|gb|EAR07291.1| 50S ribosomal protein L3 [Reinekea sp. MED297]
          Length = 210

 Score =  172 bits (437), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 98/211 (46%), Positives = 128/211 (60%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK GMT V+  +G  +PVTVL ++  +V   +T+D +GY AVQ+ AG  +   
Sbjct: 1   MSIGLIGRKAGMTRVFTEDGVSVPVTVLEIEPNRVAQVKTVDTDGYAAVQLTAGNKRANK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SK   G F+  NV       EF V  D      G   +   F  GQ VDVTG + GKGF
Sbjct: 61  LSKSQAGHFAKANVEAGVLTREFPV-ADVSEYETGKELTVELFEAGQKVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GA+KRHNF    ATHG S+SHR+ GS G  Q PGRV+K KKMAG MG  R T ++LEVV
Sbjct: 120 AGAIKRHNFRTQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGHMGAERHTTQSLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD  R L+L+KG VPGA   S ++V+ + K
Sbjct: 180 RVDTDRNLLLIKGAVPGA-TGSHVVVQSAVK 209


>gi|149279664|ref|ZP_01885793.1| 50S ribosomal protein L3 [Pedobacter sp. BAL39]
 gi|149229700|gb|EDM35090.1| 50S ribosomal protein L3 [Pedobacter sp. BAL39]
          Length = 205

 Score =  172 bits (437), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 89/204 (43%), Positives = 131/204 (64%), Gaps = 3/204 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++ +G+ IP TV+    C V   +T +K+GY++VQ+G  EAK KN +
Sbjct: 2   SGIIGKKVGMTSIFDADGKNIPCTVIEAGPCVVTQVKTEEKDGYVSVQLGFDEAKEKNTT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +P++G F+  N +PK+KL EF     ++ L +G+  +   F  G  VDV G + GKGF G
Sbjct: 62  QPLKGHFAKANTTPKRKLVEF--DPFEEPLELGATVTVDIFNEGDFVDVVGTSKGKGFQG 119

Query: 123 AMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG+   THG     R+ GS G    P RVFK  +MAGRMGG+RV ++NL+V+ 
Sbjct: 120 VVKRHGFGGVGGQTHGQHNRMRAPGSLGAASYPARVFKGMRMAGRMGGDRVKIQNLQVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWIL 205
           V   + L++V G VPGAK +  IL
Sbjct: 180 VYADKNLVVVSGSVPGAKGSYVIL 203


>gi|198282637|ref|YP_002218958.1| 50S ribosomal protein L3 [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218666383|ref|YP_002424830.1| ribosomal protein L3 [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|226725119|sp|B7J467|RL3_ACIF2 RecName: Full=50S ribosomal protein L3
 gi|226725120|sp|B5ELX9|RL3_ACIF5 RecName: Full=50S ribosomal protein L3
 gi|198247158|gb|ACH82751.1| ribosomal protein L3 [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218518596|gb|ACK79182.1| ribosomal protein L3 [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 210

 Score =  172 bits (437), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 93/211 (44%), Positives = 133/211 (63%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT +   +GR +PVTV+H+    V   + +  +GY AVQV  G  + + 
Sbjct: 1   MVMGLIGRKVGMTRIVAGDGRVLPVTVIHVAPNTVAQVKDIATDGYCAVQVATGTRRPQR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+  + G F    ++P + L EFRV  D      G       F  GQ VDV+G++ GKGF
Sbjct: 61  VTSALAGHFRKNGIAPGRLLREFRV-ADTANYACGMDIDLDIFAEGQRVDVSGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GA+KRHNF   RA+HG S+SHR+ GS GCRQ PGRVFK KKMAG +G  +VT  NLE+V
Sbjct: 120 AGAIKRHNFRSNRASHGNSLSHRAPGSIGCRQTPGRVFKGKKMAGHLGAEQVTTLNLELV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +D  R L+++KG VPGA ++  +++R + +
Sbjct: 180 RIDANRRLLMIKGAVPGA-RDGDVMIRPAVR 209


>gi|302849682|ref|XP_002956370.1| mitochondrial ribosomal protein L3 [Volvox carteri f. nagariensis]
 gi|300258276|gb|EFJ42514.1| mitochondrial ribosomal protein L3 [Volvox carteri f. nagariensis]
          Length = 428

 Score =  172 bits (436), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 96/209 (45%), Positives = 132/209 (63%), Gaps = 2/209 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R G +A K GMT  ++  G R+P+TVL +D CQVV  +T + +G  A+ +GAG  + K 
Sbjct: 151 LRVGCIATKAGMTQEWDEHGVRVPLTVLWIDECQVVGVKTHEVHGRTALMLGAGHKRQKC 210

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +S    GFF  V +  KK + E+ V  +D LLP+G+  + ++F  GQ VDVTG T  KGF
Sbjct: 211 MSPSQAGFFLKVGLPFKKLVAEWPVS-EDALLPMGTHITAAHFVAGQRVDVTGWTKYKGF 269

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G MKR  F G  A+HGVS+SHR+ G+ G RQDPG+V+K KK+ G MG  R TV +  V 
Sbjct: 270 QGVMKRWGFKGQPASHGVSLSHRAPGAIGNRQDPGKVWKGKKLPGCMGDERRTVHHCLVY 329

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            VD  R L+ ++G VPG K  S + +RDS
Sbjct: 330 KVDAARNLVYIRGQVPGPKGRS-VYLRDS 357


>gi|288917230|ref|ZP_06411599.1| ribosomal protein L3 [Frankia sp. EUN1f]
 gi|288351421|gb|EFC85629.1| ribosomal protein L3 [Frankia sp. EUN1f]
          Length = 237

 Score =  172 bits (436), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 95/208 (45%), Positives = 124/208 (59%), Gaps = 2/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      V   +T D +GY AVQ+G GE   + ++K
Sbjct: 8   GLLGTKLGMTQVWDANNRVVPVTVIQAGPNVVTQVKTTDNDGYSAVQLGFGEIDPRRINK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+RG F +  V+P++ L E R   D      G   +   F  GQ+VDVTG + GKGF+G 
Sbjct: 68  PLRGHFETSGVTPRRHLVELRT-ADAGNYRAGQELTGELFDAGQVVDVTGTSKGKGFAGV 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GL A HGV   HRS GS G    PGRVFK  +MAGRMG  RVTV  L + +VD
Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGHARVTVAGLTIHAVD 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +RG +L+KG VPG      + VR + K
Sbjct: 187 TERGFLLIKGAVPG-PDGGLVFVRSAAK 213


>gi|330432124|gb|AEC17183.1| 50S ribosomal protein L3 [Gallibacterium anatis UMN179]
          Length = 209

 Score =  172 bits (436), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 94/202 (46%), Positives = 129/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT ++N +G  IPVTV+ ++  +V   +TL+ +GY AVQV  G  K  +V+K
Sbjct: 3   GLIGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTLETDGYCAVQVTTGSKKASHVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V   + L+EFRV + ++   +G   +   F   + VDVTG + GKG++G 
Sbjct: 63  PEAGHFVKAGVEAGRGLWEFRVAEGEEFT-LGQEINVDIFADVKKVDVTGTSKGKGYAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKM+G +G  RVTV++LEVV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGRVFKGKKMSGHLGNERVTVQSLEVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA     I+
Sbjct: 182 AERKLLLVKGAVPGATGGDLIV 203


>gi|30248418|ref|NP_840488.1| ribosomal protein L3 [Nitrosomonas europaea ATCC 19718]
 gi|42559613|sp|Q82X88|RL3_NITEU RecName: Full=50S ribosomal protein L3
 gi|30138304|emb|CAD84312.1| Ribosomal protein L3 [Nitrosomonas europaea ATCC 19718]
          Length = 215

 Score =  172 bits (436), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 96/212 (45%), Positives = 130/212 (61%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +K+GMT V+   G  IPVTVL +   +VV  +T +K+GY AVQ+  G  +   
Sbjct: 1   MKLGLIGKKIGMTRVFTESGNSIPVTVLDVSGNRVVQVKTEEKDGYSAVQLTQGYRRKNR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++K + G FS   V     + EFRV  D    + +GS  S   F VG  VDV G++IGKG
Sbjct: 61  ITKALSGHFSQAGVEAGTVIKEFRVDHDIGSDIKIGSEISVELFEVGSKVDVCGISIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KRHNF   RA+HG S SH   GS G  QDPGRVF  KKM G +G  + TV+N+EV
Sbjct: 121 YAGTIKRHNFSSSRASHGNSRSHNVPGSIGMAQDPGRVFPGKKMTGHLGNAQCTVQNIEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD  RGL+ +KG VPG+K N  + +R   K
Sbjct: 181 VRVDAGRGLLFLKGSVPGSKGN-GVFIRPGVK 211


>gi|260599639|ref|YP_003212210.1| 50S ribosomal protein L3 [Cronobacter turicensis z3032]
 gi|260218816|emb|CBA34171.1| 50S ribosomal protein L3 [Cronobacter turicensis z3032]
          Length = 209

 Score =  172 bits (436), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 95/202 (47%), Positives = 127/202 (62%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  EG  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEEGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+  D +   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLA-DGEEFTVGQSISVELFAEVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|84494786|ref|ZP_00993905.1| putative ribosomal protein L3 [Janibacter sp. HTCC2649]
 gi|84384279|gb|EAQ00159.1| putative ribosomal protein L3 [Janibacter sp. HTCC2649]
          Length = 218

 Score =  172 bits (435), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 92/210 (43%), Positives = 126/210 (60%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+ +KLGMT V++ E R IPVTV+    C V   R  + +GY AVQ+  G    + V+K
Sbjct: 11  GVLGKKLGMTQVWDAENRLIPVTVIEAGPCVVTQVRNAETDGYAAVQIAFGAIDPRKVTK 70

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+P++ L E R   D     +G   +   F  GQ VD++  T GKGF+G 
Sbjct: 71  PLTGHFEKAGVTPRRHLVELRTA-DAAEYSLGQELTAETFEAGQAVDISATTKGKGFAGV 129

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G+ ++HG   +HR  GS G    PGRVFK  +MAGRMGG R T +NL + +V 
Sbjct: 130 MKRHGFHGVSSSHGSHKNHRKPGSIGGCATPGRVFKGMRMAGRMGGVRQTTQNLTIHAVV 189

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             +GL+LVKG VPG  + + +LVR++ K A
Sbjct: 190 ADKGLLLVKGAVPG-PRGAVVLVRNAVKGA 218


>gi|326385099|ref|ZP_08206769.1| 50S ribosomal protein L3 [Gordonia neofelifaecis NRRL B-59395]
 gi|326196184|gb|EGD53388.1| 50S ribosomal protein L3 [Gordonia neofelifaecis NRRL B-59395]
          Length = 218

 Score =  172 bits (435), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 93/208 (44%), Positives = 127/208 (61%), Gaps = 2/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+   +  V   RT D++GY A+Q+  G    + V+K
Sbjct: 9   GILGTKLGMTQVFDENNRVVPVTVIATGSNVVTQLRTADRDGYTAIQLAYGAIDPRKVNK 68

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F+   V+P++ L E R+  D     VG       F  G  VDVTG + GKGF+G 
Sbjct: 69  PVAGQFAKAGVTPRRHLTEIRIN-DISEFEVGQELGADIFAEGVKVDVTGTSKGKGFAGV 127

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GL A+HG    HRS GS G    PGRVFK  +MAGRMG ++VT +NL V  VD
Sbjct: 128 MKRHGFAGLGASHGAHRVHRSPGSIGGCATPGRVFKGTRMAGRMGSDKVTTQNLTVHKVD 187

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            + GL+L+KG +PG +K   ++VRD+ K
Sbjct: 188 AEAGLLLIKGAIPG-RKGGIVVVRDAVK 214


>gi|149247048|ref|XP_001527949.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146447903|gb|EDK42291.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 278

 Score =  172 bits (435), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 94/211 (44%), Positives = 130/211 (61%), Gaps = 3/211 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+   K GM   +  +G +   TV+ +D+C+V+  +T D++GY A  +G  + K+KN 
Sbjct: 59  RPGLFGIKRGMITWFTPKGEQFAATVIEIDSCEVIGQKTRDQHGYDANIIGTID-KLKNY 117

Query: 62  SKPMR-GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +      F    VSPK K  EFRV   ++L+PVG+     YF+VGQ+VD+ G+T GKGF
Sbjct: 118 PREAELKMFEEAGVSPKHKFGEFRVLDTNNLIPVGTELKADYFSVGQMVDIKGITKGKGF 177

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NF G  ATHGVS +HR+ GS G  Q+PGRV   KKM GRMG +  T  N EV+
Sbjct: 178 AGVMKRWNFAGNNATHGVSKAHRTPGSMGGNQNPGRVLPGKKMPGRMGCDNRTEFNKEVL 237

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD   GL++VKG +PG  K S + + D+ K
Sbjct: 238 HVDGDAGLLIVKGNIPGPNK-SIVRISDALK 267


>gi|93005314|ref|YP_579751.1| 50S ribosomal protein L3 [Psychrobacter cryohalolentis K5]
 gi|109893543|sp|Q1QDI6|RL3_PSYCK RecName: Full=50S ribosomal protein L3
 gi|92392992|gb|ABE74267.1| LSU ribosomal protein L3P [Psychrobacter cryohalolentis K5]
          Length = 212

 Score =  172 bits (435), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 95/214 (44%), Positives = 131/214 (61%), Gaps = 4/214 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V +K GMT V+   G  IPVTV+ +   ++   +  D +GY A+QV  G  +   
Sbjct: 1   MAIGLVGKKCGMTRVFTEAGASIPVTVVEISANRITQVKNTDVDGYQAIQVTTGTRRDSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLL--PVGSVFSPSYFTVGQLVDVTGMTIGK 118
           V+   +G F+   V+  + ++EFR   D DL    +G       F  GQ+VDVTG + GK
Sbjct: 61  VTAAQKGHFAKAGVAAGRGVWEFRA-NDSDLEGREIGGEILADLFEQGQMVDVTGNSKGK 119

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G +KRHNF    ATHG S+SHR+ GSTG  Q PG+VFK KKM G+MG  RVTV+ LE
Sbjct: 120 GFQGGVKRHNFSMQDATHGNSVSHRAIGSTGQNQSPGKVFKGKKMPGQMGNKRVTVQGLE 179

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V+SVD + GL+++KG +PGA     ++VR S K+
Sbjct: 180 VISVDVENGLLVIKGAIPGATGGD-VIVRPSVKA 212


>gi|300721365|ref|YP_003710636.1| 50S ribosomal subunit protein L3 [Xenorhabdus nematophila ATCC
           19061]
 gi|297627853|emb|CBJ88399.1| 50S ribosomal subunit protein L3 [Xenorhabdus nematophila ATCC
           19061]
          Length = 210

 Score =  172 bits (435), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 95/209 (45%), Positives = 132/209 (63%), Gaps = 1/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++N +V   +  + +GY A+QV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKNDETDGYRAIQVTTGSKKANRVNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
              G F+   V   + L EFR+ + D    VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  SEAGHFAKAGVEAGRILREFRLSEGDAEFTVGQSISVEIFADVKKVDVTGTSKGKGFAGT 122

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 123 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 182

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L+LVKG VPGA  NS ++V+ + K+
Sbjct: 183 AERNLLLVKGAVPGA-TNSNLIVKPAVKA 210


>gi|291001533|ref|XP_002683333.1| 50S ribosomal protein L3 [Naegleria gruberi]
 gi|284096962|gb|EFC50589.1| 50S ribosomal protein L3 [Naegleria gruberi]
          Length = 449

 Score =  172 bits (435), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 93/216 (43%), Positives = 133/216 (61%), Gaps = 4/216 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+GV+A+KLGM   ++    R+P+TVLH+  CQVV  +T +K+GY A+Q+GAG    K 
Sbjct: 142 VRTGVIAQKLGMIPFWDSYHARVPLTVLHIPKCQVVQVKTKEKDGYTALQLGAGSMSAKK 201

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+ G      V PK    E +V  +D +LPVG   +  +F  GQ +D++G + GK F
Sbjct: 202 LTKPLLGHCQKAGVEPKHVYTEAKVT-EDAILPVGFEITARHFIPGQFIDISGRSKGKRF 260

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR  F G  ATHGVS+ HRS GSTG   +  +VFK KKMAGRMG  ++T  N  V 
Sbjct: 261 AGPMKRWGFAGQPATHGVSVVHRSLGSTGTMIN--KVFKGKKMAGRMGHEQITQLNYYVY 318

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            VD +   I VKG VPG    +++ + D+ +  + C
Sbjct: 319 MVDVENNCIYVKGSVPGP-NGAYLYLNDASRKDLPC 353


>gi|78044555|ref|YP_361118.1| 50S ribosomal protein L3 [Carboxydothermus hydrogenoformans Z-2901]
 gi|109893418|sp|Q3A9R6|RL3_CARHZ RecName: Full=50S ribosomal protein L3
 gi|77996670|gb|ABB15569.1| ribosomal protein L3 [Carboxydothermus hydrogenoformans Z-2901]
          Length = 209

 Score =  172 bits (435), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 94/211 (44%), Positives = 135/211 (63%), Gaps = 4/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +GR IPVTV+    C VV  +T+  +GY A+Q+G GE K   
Sbjct: 1   MPKGILGRKVGMTQIFTEDGRAIPVTVIEAGPCVVVQKKTIANDGYNAIQLGFGEIKESK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F+  NV P + L E RV+ + D   VG       FTVG+ VDVTG++ GKGF
Sbjct: 61  VNKPLKGHFNRANVKPMRYLREIRVE-NIDAYEVGQEIKVDIFTVGEKVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH F      HG S  HR  GS G +  P RVF  +K+ GR+G  RVT++NLEVV
Sbjct: 120 AGGIKRHGFHRGPMAHG-SKYHRRPGSLGAK-GPARVFLGRKLPGRLGMERVTIQNLEVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L+++KG VPG  + S ++++++ K
Sbjct: 178 KVDPERNLLVIKGSVPGI-RGSLLIIKEAVK 207


>gi|291542035|emb|CBL15145.1| LSU ribosomal protein L3P [Ruminococcus bromii L2-63]
          Length = 210

 Score =  172 bits (435), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 130/212 (61%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT +++ +G  IPVTV+    C V   +T++ +GY +VQ+G G+ K   
Sbjct: 1   MQKAIIGKKIGMTQIFDEKGIMIPVTVVEAGPCVVTAKKTVENDGYASVQLGYGDVKPHK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+GFF    V+PKK L EFR   D D   +G +     FT G  +DVTG + GKG 
Sbjct: 61  VNKPMKGFFDKAGVAPKKTLKEFRFT-DTDAYSIGDLVKADVFTPGDKIDVTGKSKGKGT 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF  L+ +HG     R  GS G    P RV+K K+MAG +G  +VTV+NL VV
Sbjct: 120 AGVIKRWNFHRLKESHGTGPCVRHGGSIGACSSPSRVWKGKRMAGHLGAEQVTVQNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  LI VKG +PG  K   ++++DS K+
Sbjct: 180 KVDAENNLIAVKGAIPGPNKGI-VVIKDSVKA 210


>gi|170729700|ref|YP_001775133.1| 50S ribosomal protein L3 [Xylella fastidiosa M12]
 gi|226730591|sp|B0U5A7|RL3_XYLFM RecName: Full=50S ribosomal protein L3
 gi|167964493|gb|ACA11503.1| 50S ribosomal protein L3 [Xylella fastidiosa M12]
          Length = 215

 Score =  172 bits (435), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 99/209 (47%), Positives = 130/209 (62%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G V RK GM+ V+  +GR IPVT++     +VV  +T D +GY A+QV  G  +   V+K
Sbjct: 7   GFVGRKAGMSRVFLEDGRSIPVTLIEATANRVVQIKTSDVDGYDAIQVTVGSRRSVLVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P  G F+   V   + L+EFRV+K       VGS    S F VGQ VD+ G+T GKGF G
Sbjct: 67  PESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGFQG 126

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHNF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  R +V+NLEV+ +
Sbjct: 127 TIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEVIKI 186

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D +R LI V+G +PGA     +L+R + K
Sbjct: 187 DVERFLIAVRGAIPGASGGD-VLIRSASK 214


>gi|50122951|ref|YP_052118.1| 50S ribosomal protein L3 [Pectobacterium atrosepticum SCRI1043]
 gi|81826993|sp|Q6CZX0|RL3_ERWCT RecName: Full=50S ribosomal protein L3
 gi|49613477|emb|CAG76928.1| 50S ribosomal subunit protein L3 [Pectobacterium atrosepticum
           SCRI1043]
          Length = 209

 Score =  171 bits (434), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 94/202 (46%), Positives = 129/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV AG  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTAGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L EFR+ + ++   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRTLREFRLSEGEEFT-VGQSISVEIFADIKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|88860959|ref|ZP_01135595.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas tunicata D2]
 gi|88817172|gb|EAR26991.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas tunicata D2]
          Length = 211

 Score =  171 bits (434), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 97/212 (45%), Positives = 129/212 (60%), Gaps = 1/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+     ++   +T   +GY A+QV AG  K   
Sbjct: 1   MALGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRIAQIKTDANDGYNALQVTAGTKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+   V   + L+EFR+  D+    VGS  +   F     VDVTG + GKGF
Sbjct: 61  VNKAQAGHFAKAGVEAGRGLWEFRLSGDEGSFEVGSEITVELFNDVTKVDVTGTSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 121 QGGVKRWNFRTQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGHMGAERVTTQNLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPG+  N  ++V+ + K+
Sbjct: 181 RVDVERNLLLVKGAVPGS-INGDVIVKPAVKA 211


>gi|156932231|ref|YP_001436147.1| 50S ribosomal protein L3 [Cronobacter sakazakii ATCC BAA-894]
 gi|166233141|sp|A7MPI7|RL3_ENTS8 RecName: Full=50S ribosomal protein L3
 gi|156530485|gb|ABU75311.1| hypothetical protein ESA_00002 [Cronobacter sakazakii ATCC BAA-894]
          Length = 209

 Score =  171 bits (434), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 95/202 (47%), Positives = 127/202 (62%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  EG  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEEGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+  D +   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLA-DGEEYTVGQSISVELFAEVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|42559604|sp|Q7VTD3|RL3_BORPE RecName: Full=50S ribosomal protein L3
 gi|42559605|sp|Q7W2F6|RL3_BORPA RecName: Full=50S ribosomal protein L3
 gi|42559606|sp|Q7WRC5|RL3_BORBR RecName: Full=50S ribosomal protein L3
 gi|33564827|emb|CAE39770.1| 50S ribosomal protein L3 [Bordetella parapertussis]
 gi|33575068|emb|CAE30531.1| 50S ribosomal protein L3 [Bordetella bronchiseptica RB50]
          Length = 233

 Score =  171 bits (434), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 95/213 (44%), Positives = 128/213 (60%), Gaps = 3/213 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+V RK+GMT ++  +G  IPVTVL + N +V   ++L+ +GY A+QV  G  +   V
Sbjct: 16  RLGLVGRKVGMTRIFTEDGESIPVTVLDVSNNRVTQVKSLESDGYAAIQVTYGTRRATRV 75

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGS--VFSPSYFTVGQLVDVTGMTIGKG 119
            KP  G ++         L EFR+             +   S F  GQ VDVTG +IGKG
Sbjct: 76  VKPQAGHYAKAGAEAGSILKEFRLDPARAAEFAAGAVIAVESVFEAGQQVDVTGTSIGKG 135

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRHNFG  RA+HG S SHR  GS G  QDPGR+F  K+M+G MG    TV+NL+V
Sbjct: 136 FAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMSGHMGDVTRTVQNLDV 195

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +RGL++VKG VPG      ++VR + K+
Sbjct: 196 VRVDAERGLLMVKGAVPG-HAGGDVIVRPAVKA 227


>gi|183600753|ref|ZP_02962246.1| hypothetical protein PROSTU_04347 [Providencia stuartii ATCC 25827]
 gi|188019731|gb|EDU57771.1| hypothetical protein PROSTU_04347 [Providencia stuartii ATCC 25827]
          Length = 209

 Score =  171 bits (434), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 94/202 (46%), Positives = 128/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++N +V   +T + +GY A+QV  G  K   VSK
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKTAETDGYNAIQVTTGSKKANRVSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L EFR ++  +   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRILREFRTEEGAEF-NVGQSISVEIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|307132839|ref|YP_003884855.1| 50S ribosomal subunit protein L3 [Dickeya dadantii 3937]
 gi|306530368|gb|ADN00299.1| 50S ribosomal subunit protein L3 [Dickeya dadantii 3937]
          Length = 209

 Score =  171 bits (434), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 95/202 (47%), Positives = 128/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKTLENDGYSAVQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L EFR+  D +   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRVLREFRLA-DGEEFAVGQDISVEIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|302558994|ref|ZP_07311336.1| 50S ribosomal protein L3 [Streptomyces griseoflavus Tu4000]
 gi|302476612|gb|EFL39705.1| 50S ribosomal protein L3 [Streptomyces griseoflavus Tu4000]
          Length = 214

 Score =  171 bits (434), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 96/210 (45%), Positives = 127/210 (60%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+K
Sbjct: 7   GILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G 
Sbjct: 67  PLKGHFAKADVTPRRHLVEIRTS-DASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +VD
Sbjct: 126 MKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++GL+L+KG VPG      +LVR + K A
Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214


>gi|227876215|ref|ZP_03994331.1| ribosomal protein L3 [Mobiluncus mulieris ATCC 35243]
 gi|307701180|ref|ZP_07638202.1| 50S ribosomal protein L3 [Mobiluncus mulieris FB024-16]
 gi|227843176|gb|EEJ53369.1| ribosomal protein L3 [Mobiluncus mulieris ATCC 35243]
 gi|307613574|gb|EFN92821.1| 50S ribosomal protein L3 [Mobiluncus mulieris FB024-16]
          Length = 218

 Score =  171 bits (434), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 88/207 (42%), Positives = 129/207 (62%), Gaps = 2/207 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RKLGMT V++ EG+ +PVTV+ ++   V   RT +++GY A+Q+G G+   + V+KP
Sbjct: 12  LLGRKLGMTQVWDEEGKLVPVTVVEVEKNVVTDIRTPERDGYTALQLGFGQLDERKVTKP 71

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M G F+   V+P++ L E R   D     +G       F  G LVDVTG T GKGF+G M
Sbjct: 72  MAGHFAKSGVTPRRHLAEVRTT-DAGSYELGQELGADLFETGALVDVTGNTKGKGFAGVM 130

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH F G+ ++HG   +HR  GS G    PGRVF+   MAGRMGG R T+ NL+V ++D 
Sbjct: 131 KRHGFQGVSSSHGAHRNHRKPGSIGACATPGRVFRGLNMAGRMGGERRTIMNLKVQAIDA 190

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
            +GL+++ G +PG  K   +++R + K
Sbjct: 191 DKGLVVIAGAIPGP-KGGIVMIRSAVK 216


>gi|146313385|ref|YP_001178459.1| 50S ribosomal protein L3 [Enterobacter sp. 638]
 gi|166990936|sp|A4WFC8|RL3_ENT38 RecName: Full=50S ribosomal protein L3
 gi|145320261|gb|ABP62408.1| LSU ribosomal protein L3P [Enterobacter sp. 638]
          Length = 209

 Score =  171 bits (433), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 94/202 (46%), Positives = 129/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGSKKASRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQDISVELFAEVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  ++ I+
Sbjct: 182 AERNLLLVKGAVPGATGSNLIV 203


>gi|161609283|ref|NP_886582.2| 50S ribosomal protein L3 [Bordetella bronchiseptica RB50]
 gi|161610405|ref|NP_882394.2| 50S ribosomal protein L3 [Bordetella parapertussis 12822]
 gi|161610757|ref|NP_882123.2| 50S ribosomal protein L3 [Bordetella pertussis Tohama I]
          Length = 229

 Score =  171 bits (433), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 95/213 (44%), Positives = 128/213 (60%), Gaps = 3/213 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+V RK+GMT ++  +G  IPVTVL + N +V   ++L+ +GY A+QV  G  +   V
Sbjct: 12  RLGLVGRKVGMTRIFTEDGESIPVTVLDVSNNRVTQVKSLESDGYAAIQVTYGTRRATRV 71

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGS--VFSPSYFTVGQLVDVTGMTIGKG 119
            KP  G ++         L EFR+             +   S F  GQ VDVTG +IGKG
Sbjct: 72  VKPQAGHYAKAGAEAGSILKEFRLDPARAAEFAAGAVIAVESVFEAGQQVDVTGTSIGKG 131

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRHNFG  RA+HG S SHR  GS G  QDPGR+F  K+M+G MG    TV+NL+V
Sbjct: 132 FAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMSGHMGDVTRTVQNLDV 191

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +RGL++VKG VPG      ++VR + K+
Sbjct: 192 VRVDAERGLLMVKGAVPG-HAGGDVIVRPAVKA 223


>gi|120553652|ref|YP_958003.1| ribosomal protein L3 [Marinobacter aquaeolei VT8]
 gi|166233153|sp|A1TYJ7|RL3_MARAV RecName: Full=50S ribosomal protein L3
 gi|120323501|gb|ABM17816.1| LSU ribosomal protein L3P [Marinobacter aquaeolei VT8]
          Length = 212

 Score =  171 bits (433), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 91/199 (45%), Positives = 126/199 (63%), Gaps = 1/199 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG+ +PVTV+ ++  ++   +TL+ +GY AVQV  G  +   
Sbjct: 1   MAIGVVGRKAGMTRIFTDEGQALPVTVIEVEPNRITQLKTLESDGYRAVQVTVGSRRSSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + ++EFR+   + + L  G   + S F  GQ+VD  G + GKG
Sbjct: 61  VNKAAAGHFAKAGVEAGRGVWEFRLADGEGEDLAAGGELTVSVFEDGQVVDAVGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG+MG  +VTV+NL++
Sbjct: 121 FQGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQMGNAQVTVQNLKI 180

Query: 180 VSVDDKRGLILVKGCVPGA 198
           V VD +R L+LV G VPGA
Sbjct: 181 VRVDAERNLLLVSGAVPGA 199


>gi|163752594|ref|ZP_02159773.1| ribosomal protein L3 [Shewanella benthica KT99]
 gi|161327506|gb|EDP98713.1| ribosomal protein L3 [Shewanella benthica KT99]
          Length = 212

 Score =  171 bits (433), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 91/206 (44%), Positives = 129/206 (62%), Gaps = 1/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  +PVTV+ + + +V   +TL+ +GY A+QV  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFCEDGVSVPVTVIEITSNRVTQVKTLETDGYRALQVTTGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++KP  G F+   V   + L+E R+  D+ + + VG+  +   F     VDVTG + GKG
Sbjct: 61  ITKPEAGHFAKAGVEAGRGLWEVRLADDEGEGIEVGAELNVDIFADIAKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF     THG S+SHRS+GS G  Q PGRVFK KKM+G MG  RVT +NL+V
Sbjct: 121 FQGGIKRWNFHAQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205
           + VD +R L+LVKG VPGA   + I+
Sbjct: 181 IRVDAERNLLLVKGAVPGAINGNLII 206


>gi|284923326|emb|CBG36420.1| 50S ribosomal subunit protein L3 [Escherichia coli 042]
          Length = 209

 Score =  171 bits (433), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 93/202 (46%), Positives = 129/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K  +V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANSVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|107103776|ref|ZP_01367694.1| hypothetical protein PaerPA_01004847 [Pseudomonas aeruginosa PACS2]
          Length = 200

 Score =  171 bits (433), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 92/201 (45%), Positives = 128/201 (63%), Gaps = 3/201 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV AGE +   V+K   G F+ 
Sbjct: 1   MTRIFTEEGVSIPVTVIEVEPNRVTQFKTEETDGYRAVQVTAGERRASRVTKAQAGHFAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
            NV+  + ++EFR+   ++    G   +   F  GQ+VDVTG + GKGF+G +KR NF G
Sbjct: 61  ANVAAGRGVWEFRL--GEEQYAAGDQITVDLFQAGQMVDVTGESKGKGFAGTIKRWNFRG 118

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
              THG S+SHR  GS G  Q PGRVFK KKM+G +G  RVTV++LE+V VD +R L+LV
Sbjct: 119 QDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHLGAERVTVQSLEIVRVDAERNLLLV 178

Query: 192 KGCVPGAKKNSWILVRDSFKS 212
           KG VPGA     ++VR + K+
Sbjct: 179 KGAVPGATGGD-VIVRPAAKA 198


>gi|127511092|ref|YP_001092289.1| 50S ribosomal protein L3 [Shewanella loihica PV-4]
 gi|166234593|sp|A3Q982|RL3_SHELP RecName: Full=50S ribosomal protein L3
 gi|126636387|gb|ABO22030.1| LSU ribosomal protein L3P [Shewanella loihica PV-4]
          Length = 212

 Score =  171 bits (433), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 90/206 (43%), Positives = 127/206 (61%), Gaps = 1/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  IPVTV+ +   +V   +TL+ +GY A+Q+  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFTEDGASIPVTVIEIAANRVAQVKTLETDGYRALQITTGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++KP  G F+   V   + L+E R+   + + + VG+  +   F     VDVTG + GKG
Sbjct: 61  ITKPEAGHFAKAGVEAGRGLWEMRLADGEGEGIEVGAELNVDIFADVAKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S++HR++GS G  Q PGRVFK KKM+G MG  RVT +NL+V
Sbjct: 121 FQGGIKRWNFRTQDATHGNSLAHRANGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205
           V VD +R L+LVKG VPGA     I+
Sbjct: 181 VRVDAERNLLLVKGAVPGATNGDLII 206


>gi|323164885|gb|EFZ50676.1| ribosomal L3 family protein [Shigella sonnei 53G]
          Length = 209

 Score =  171 bits (433), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 93/202 (46%), Positives = 128/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFAEVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|269958584|ref|YP_003328371.1| 50S ribosomal protein L3 [Anaplasma centrale str. Israel]
 gi|269848413|gb|ACZ49057.1| 50S ribosomal protein L3 [Anaplasma centrale str. Israel]
          Length = 232

 Score =  171 bits (433), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/220 (48%), Positives = 138/220 (62%), Gaps = 5/220 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ +K+G T V+   G R+PVT+L L++  VV  +  D +GY AV +G    +   +
Sbjct: 6   RVGLLMKKIGNTAVFGDSGARVPVTLLLLEDTLVVEVKRRDVHGYDAVVLGV--RRPGRL 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP         +     LFE RV   D + P GS  S  +F  GQ VDV G +IG+GF+
Sbjct: 64  NKPQVCALRKKGIDVDCHLFESRVDAVDGIEP-GSRISVDHFFQGQFVDVAGRSIGRGFA 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF GLRA+HGVSISHRS GSTG  QDPGRVFK KKMAG MG +   V+NL VV 
Sbjct: 123 GVMKRHNFRGLRASHGVSISHRSQGSTGQCQDPGRVFKGKKMAGHMGCSMSVVQNLRVVL 182

Query: 182 VDDKRGLILVKGC-VPGAKKNSWILVRDSFKSAVNCKGKV 220
           VD +R L++V+G  VPG+   S++LVRD+ K  V   G V
Sbjct: 183 VDSERSLLVVEGTNVPGS-CGSYVLVRDAVKKPVPGGGNV 221


>gi|82701900|ref|YP_411466.1| ribosomal protein L3 [Nitrosospira multiformis ATCC 25196]
 gi|109893529|sp|Q2YAZ7|RL3_NITMU RecName: Full=50S ribosomal protein L3
 gi|82409965|gb|ABB74074.1| LSU ribosomal protein L3P [Nitrosospira multiformis ATCC 25196]
          Length = 236

 Score =  171 bits (433), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 96/214 (44%), Positives = 132/214 (61%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG   PVTVL + N +V   +T   +GY AVQV  G+ +   
Sbjct: 1   MSLGLVGRKVGMTRIFTEEGDSQPVTVLDVSNNRVTQIKTPATDGYSAVQVTFGKRRAIR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP  G F+   V   + L EFRV ++    L  G+V     F  GQ VDVTG +IGKG
Sbjct: 61  VNKPSAGHFAKAAVEAGEILREFRVAEEILGTLSPGTVIGLDIFQPGQRVDVTGTSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++GA+KRH F   RA+HG S SH   GS G  QDPGRVF  K+M G +G  R T++NLE+
Sbjct: 121 YAGAIKRHGFASNRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGNVRRTIQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           + +D +RGL+++KG +PG+K    + V  S +SA
Sbjct: 181 LRIDAERGLLIIKGAIPGSKGGD-VTVSPSIRSA 213


>gi|291619176|ref|YP_003521918.1| RplC [Pantoea ananatis LMG 20103]
 gi|291154206|gb|ADD78790.1| RplC [Pantoea ananatis LMG 20103]
 gi|327395506|dbj|BAK12928.1| 50S ribosomal protein L3 RplC [Pantoea ananatis AJ13355]
          Length = 209

 Score =  171 bits (432), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 93/202 (46%), Positives = 128/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L+ +GY A+QV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKGLENDGYQAIQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR  + D+   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRTVEGDEY-AVGQSISVEIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|238898927|ref|YP_002924609.1| 50S ribosomal subunit protein L3 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|259646549|sp|C4K7B8|RL3_HAMD5 RecName: Full=50S ribosomal protein L3
 gi|229466687|gb|ACQ68461.1| 50S ribosomal subunit protein L3 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 210

 Score =  171 bits (432), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 94/195 (48%), Positives = 128/195 (65%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +KLGMT ++  +G  IPVTV+ +   +V   + LD +GY+A+Q+  G  K   V+K
Sbjct: 3   GLVGKKLGMTRIFTKDGISIPVTVIEIKANRVTQIKNLDSDGYLALQITTGTKKASRVNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+  NV   + L+EFRV + D  + +G  F  S F  G +VDVTG + GKGFSG 
Sbjct: 63  PKAGHFAKANVEAGRGLWEFRVSEQDATVFLGHTFEVSMFKPGDIVDVTGKSKGKGFSGT 122

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    A+HG S+SHR  GS G  Q PG+VFK KKM+G++G  RVT++NLEVV VD
Sbjct: 123 VKRWNFRTQDASHGNSLSHRVPGSIGQNQTPGKVFKGKKMSGQLGNERVTIQNLEVVRVD 182

Query: 184 DKRGLILVKGCVPGA 198
             R ++L+KG VPGA
Sbjct: 183 VVREILLIKGGVPGA 197


>gi|157377449|ref|YP_001476049.1| 50S ribosomal protein L3 [Shewanella sediminis HAW-EB3]
 gi|189029482|sp|A8G1E8|RL3_SHESH RecName: Full=50S ribosomal protein L3
 gi|157319823|gb|ABV38921.1| ribosomal protein L3 [Shewanella sediminis HAW-EB3]
          Length = 212

 Score =  171 bits (432), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 91/206 (44%), Positives = 128/206 (62%), Gaps = 1/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  IPVTV+ + + +V   +TL+ +GY A+QV  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFAEDGVSIPVTVIEIASNRVTQVKTLETDGYRALQVTTGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++KP  G F+   V   + L+E R+   + + + VG+  +   F     VDVTG + GKG
Sbjct: 61  ITKPEAGHFAKAGVEAGRGLWEVRLADGEGESIEVGAELNVDIFADVAKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF     THG S++HRS+GS G  Q PGRVFK KKM+G MG  RVT +NL+V
Sbjct: 121 FQGGIKRWNFHAQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205
           V VD +R L+LVKG VPGA   + I+
Sbjct: 181 VRVDAERNLLLVKGAVPGATNGNLII 206


>gi|312200020|ref|YP_004020081.1| 50S ribosomal protein L3 [Frankia sp. EuI1c]
 gi|311231356|gb|ADP84211.1| 50S ribosomal protein L3 [Frankia sp. EuI1c]
          Length = 232

 Score =  171 bits (432), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 96/208 (46%), Positives = 124/208 (59%), Gaps = 2/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++ + R +P+TV+      V   +T D +GY AVQ+G GE   +  +K
Sbjct: 8   GLLGTKLGMTQVWDAQNRVVPITVIQAGPNVVTQVKTPDNDGYAAVQLGYGEIDPRKTNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P RG F++  V+P++ L E R   D      G     S F  G +VDVTG + GKGF+G 
Sbjct: 68  PTRGHFAAAGVTPRRHLAELRT-ADAGNYSAGLQLDGSVFDAGTVVDVTGTSKGKGFAGV 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GL A HGV   HRS GS G    PGRVFK  +MAGRMG  RVTV  L V +VD
Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGNVRVTVAGLTVHAVD 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +RGL+L+KG VPG      + VR + K
Sbjct: 187 AERGLLLIKGAVPGV-DGGLVFVRSAAK 213


>gi|50955566|ref|YP_062854.1| 50S ribosomal protein L3 [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|81826588|sp|Q6ACZ5|RL3_LEIXX RecName: Full=50S ribosomal protein L3
 gi|50952048|gb|AAT89749.1| 50S ribosomal protein L3 [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 219

 Score =  171 bits (432), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 92/210 (43%), Positives = 126/210 (60%), Gaps = 1/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT V++     IPVTV+ +    V   RT + +GY AVQ+  G+   + V+K
Sbjct: 11  GLLGKKLGMTQVWDENDTLIPVTVIEITPNVVTQVRTPEADGYNAVQIAYGQIDRRKVNK 70

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ L E R     +      +     F  GQLVDV G +  KGF+G 
Sbjct: 71  PSAGHFDKAGVTPRRHLTEVRTADAAEYSAGQELTVDGTFEAGQLVDVVGTSKSKGFAGV 130

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF G+ A+HG   +HR  GS G    P RVFK  +MAGRMGG RVTV NL+V ++D
Sbjct: 131 MKRHNFQGVSASHGAHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGERVTVLNLKVQAID 190

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++GL+LVKG VPGA +   + VR++ K A
Sbjct: 191 AEKGLLLVKGAVPGA-RGRIVFVRNAVKGA 219


>gi|212708981|ref|ZP_03317109.1| hypothetical protein PROVALCAL_00013 [Providencia alcalifaciens DSM
           30120]
 gi|212688347|gb|EEB47875.1| hypothetical protein PROVALCAL_00013 [Providencia alcalifaciens DSM
           30120]
          Length = 209

 Score =  171 bits (432), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 93/202 (46%), Positives = 129/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++N +V   +T + +GY A+QV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKTAETDGYNAIQVTTGSKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L EFR ++  +   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRILREFRTEEGAEF-NVGQSISVEIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  ++ I+
Sbjct: 182 AERNLLLVKGAVPGATGSNLIV 203


>gi|256025952|ref|ZP_05439817.1| 50S ribosomal protein L3 [Escherichia sp. 4_1_40B]
          Length = 209

 Score =  171 bits (432), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 93/202 (46%), Positives = 128/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLTNDGYRAIQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|320531960|ref|ZP_08032861.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320135827|gb|EFW27874.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 222

 Score =  171 bits (432), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 91/209 (43%), Positives = 129/209 (61%), Gaps = 2/209 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++  KLGMT +++  G   PVTV+ +D   V   RT++ +GY AVQ+  G+   + V+KP
Sbjct: 16  LLGTKLGMTQIWDENGVLRPVTVVRVDTNVVTQVRTIETDGYEAVQLAFGDIDARKVTKP 75

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + G F+ V V P++ + E R     +  P G   +   F VGQLVDVTG + GKGF+G M
Sbjct: 76  LAGHFAKVGVEPRRHVAEIRTSLASEFTP-GQELAADTFEVGQLVDVTGTSKGKGFAGVM 134

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH F G+ A+HG   +HR  GS G    PGR+FK  +MAGRMG  R TV+NL++  VD 
Sbjct: 135 KRHGFAGVGASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGHARRTVQNLKIRGVDV 194

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +G++LV G +PG  K S ++VR + K A
Sbjct: 195 DKGVLLVNGAIPG-PKGSVVVVRTAVKGA 222


>gi|238792938|ref|ZP_04636568.1| 50S ribosomal protein L3 [Yersinia intermedia ATCC 29909]
 gi|238727792|gb|EEQ19316.1| 50S ribosomal protein L3 [Yersinia intermedia ATCC 29909]
          Length = 209

 Score =  171 bits (432), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 93/202 (46%), Positives = 128/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   ++L+ +GY AVQV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYRAVQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+ +  +    G   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLPEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG MG  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGHMGDERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA   + I+
Sbjct: 182 AERNLLLVKGAVPGATGGNLIV 203


>gi|322831072|ref|YP_004211099.1| 50S ribosomal protein L3 [Rahnella sp. Y9602]
 gi|321166273|gb|ADW71972.1| 50S ribosomal protein L3 [Rahnella sp. Y9602]
          Length = 209

 Score =  171 bits (432), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 93/202 (46%), Positives = 128/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + LD +GY AVQV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLDNDGYRAVQVTTGSKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+ + ++    G   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-AGQNISVEIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA   + I+
Sbjct: 182 AERNLLLVKGAVPGATGGNLIV 203


>gi|15803847|ref|NP_289881.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 EDL933]
 gi|15833439|ref|NP_312212.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 str. Sakai]
 gi|16131199|ref|NP_417779.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12
           substr. MG1655]
 gi|24114598|ref|NP_709108.1| 50S ribosomal protein L3 [Shigella flexneri 2a str. 301]
 gi|26249915|ref|NP_755955.1| 50S ribosomal protein L3 [Escherichia coli CFT073]
 gi|30065379|ref|NP_839550.1| 50S ribosomal protein L3 [Shigella flexneri 2a str. 2457T]
 gi|82545683|ref|YP_409630.1| 50S ribosomal protein L3 [Shigella boydii Sb227]
 gi|82778616|ref|YP_404965.1| 50S ribosomal protein L3 [Shigella dysenteriae Sd197]
 gi|89110690|ref|AP_004470.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12
           substr. W3110]
 gi|91212757|ref|YP_542743.1| 50S ribosomal protein L3 [Escherichia coli UTI89]
 gi|110643559|ref|YP_671289.1| 50S ribosomal protein L3 [Escherichia coli 536]
 gi|110807167|ref|YP_690687.1| 50S ribosomal protein L3 [Shigella flexneri 5 str. 8401]
 gi|117625598|ref|YP_858921.1| 50S ribosomal protein L3 [Escherichia coli APEC O1]
 gi|157156606|ref|YP_001464788.1| 50S ribosomal protein L3 [Escherichia coli E24377A]
 gi|157162794|ref|YP_001460112.1| 50S ribosomal protein L3 [Escherichia coli HS]
 gi|168752799|ref|ZP_02777821.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4113]
 gi|168753088|ref|ZP_02778095.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4401]
 gi|168769186|ref|ZP_02794193.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4486]
 gi|168785139|ref|ZP_02810146.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC869]
 gi|170018444|ref|YP_001723398.1| 50S ribosomal protein L3 [Escherichia coli ATCC 8739]
 gi|170082839|ref|YP_001732159.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12
           substr. DH10B]
 gi|170680319|ref|YP_001745582.1| 50S ribosomal protein L3 [Escherichia coli SMS-3-5]
 gi|187733677|ref|YP_001882004.1| 50S ribosomal protein L3 [Shigella boydii CDC 3083-94]
 gi|188495143|ref|ZP_03002413.1| ribosomal protein L3 [Escherichia coli 53638]
 gi|191171516|ref|ZP_03033064.1| ribosomal protein L3 [Escherichia coli F11]
 gi|195939869|ref|ZP_03085251.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 str. EC4024]
 gi|208806486|ref|ZP_03248823.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4206]
 gi|208812110|ref|ZP_03253439.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4045]
 gi|208818332|ref|ZP_03258652.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4042]
 gi|209398982|ref|YP_002272776.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4115]
 gi|209920786|ref|YP_002294870.1| 50S ribosomal protein L3 [Escherichia coli SE11]
 gi|215488620|ref|YP_002331051.1| 50S ribosomal protein L3 [Escherichia coli O127:H6 str. E2348/69]
 gi|217325713|ref|ZP_03441797.1| ribosomal protein L3 [Escherichia coli O157:H7 str. TW14588]
 gi|218550595|ref|YP_002384386.1| 50S ribosomal protein L3 [Escherichia fergusonii ATCC 35469]
 gi|218555877|ref|YP_002388790.1| 50S ribosomal protein L3 [Escherichia coli IAI1]
 gi|218560381|ref|YP_002393294.1| 50S ribosomal protein L3 [Escherichia coli S88]
 gi|218691606|ref|YP_002399818.1| 50S ribosomal protein L3 [Escherichia coli ED1a]
 gi|218697012|ref|YP_002404679.1| 50S ribosomal protein L3 [Escherichia coli 55989]
 gi|218702082|ref|YP_002409711.1| 50S ribosomal protein L3 [Escherichia coli IAI39]
 gi|218706927|ref|YP_002414446.1| 50S ribosomal protein L3 [Escherichia coli UMN026]
 gi|227883451|ref|ZP_04001256.1| 50S ribosomal protein L3 [Escherichia coli 83972]
 gi|237703050|ref|ZP_04533531.1| ribosomal protein L3 [Escherichia sp. 3_2_53FAA]
 gi|238902411|ref|YP_002928207.1| 50S ribosomal subunit protein L3 [Escherichia coli BW2952]
 gi|253771856|ref|YP_003034687.1| 50S ribosomal protein L3 [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254038481|ref|ZP_04872537.1| 50S ribosomal protein L3 [Escherichia sp. 1_1_43]
 gi|254163248|ref|YP_003046356.1| 50S ribosomal protein L3 [Escherichia coli B str. REL606]
 gi|254795257|ref|YP_003080094.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 str. TW14359]
 gi|256020679|ref|ZP_05434544.1| 50S ribosomal protein L3 [Shigella sp. D9]
 gi|260846118|ref|YP_003223896.1| 50S ribosomal subunit protein L3 [Escherichia coli O103:H2 str.
           12009]
 gi|260857441|ref|YP_003231332.1| 50S ribosomal subunit protein L3 [Escherichia coli O26:H11 str.
           11368]
 gi|260870063|ref|YP_003236465.1| 50S ribosomal subunit protein L3 [Escherichia coli O111:H- str.
           11128]
 gi|261224625|ref|ZP_05938906.1| 50S ribosomal subunit protein L3 [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261254481|ref|ZP_05947014.1| 50S ribosomal subunit protein L3 [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291284678|ref|YP_003501496.1| 50S ribosomal protein L3 [Escherichia coli O55:H7 str. CB9615]
 gi|293406917|ref|ZP_06650841.1| 50S ribosomal protein L3 [Escherichia coli FVEC1412]
 gi|293412739|ref|ZP_06655407.1| 50S ribosomal protein L3 [Escherichia coli B354]
 gi|293416737|ref|ZP_06659374.1| 50S ribosomal protein L3 [Escherichia coli B185]
 gi|293453638|ref|ZP_06664057.1| 50S ribosomal protein L3 [Escherichia coli B088]
 gi|297516596|ref|ZP_06934982.1| 50S ribosomal protein L3 [Escherichia coli OP50]
 gi|298382657|ref|ZP_06992252.1| 50S ribosomal protein L3 [Escherichia coli FVEC1302]
 gi|300815470|ref|ZP_07095695.1| 50S ribosomal protein L3 [Escherichia coli MS 107-1]
 gi|300822877|ref|ZP_07103013.1| 50S ribosomal protein L3 [Escherichia coli MS 119-7]
 gi|300896668|ref|ZP_07115184.1| 50S ribosomal protein L3 [Escherichia coli MS 198-1]
 gi|300903568|ref|ZP_07121490.1| 50S ribosomal protein L3 [Escherichia coli MS 84-1]
 gi|300918293|ref|ZP_07134897.1| 50S ribosomal protein L3 [Escherichia coli MS 115-1]
 gi|300921871|ref|ZP_07138027.1| 50S ribosomal protein L3 [Escherichia coli MS 182-1]
 gi|300932213|ref|ZP_07147492.1| 50S ribosomal protein L3 [Escherichia coli MS 187-1]
 gi|300935318|ref|ZP_07150328.1| 50S ribosomal protein L3 [Escherichia coli MS 21-1]
 gi|300946542|ref|ZP_07160807.1| 50S ribosomal protein L3 [Escherichia coli MS 116-1]
 gi|300954805|ref|ZP_07167232.1| 50S ribosomal protein L3 [Escherichia coli MS 175-1]
 gi|300973999|ref|ZP_07172406.1| 50S ribosomal protein L3 [Escherichia coli MS 200-1]
 gi|300979891|ref|ZP_07174767.1| 50S ribosomal protein L3 [Escherichia coli MS 45-1]
 gi|301018816|ref|ZP_07183060.1| 50S ribosomal protein L3 [Escherichia coli MS 69-1]
 gi|301021130|ref|ZP_07185170.1| 50S ribosomal protein L3 [Escherichia coli MS 196-1]
 gi|301046091|ref|ZP_07193269.1| 50S ribosomal protein L3 [Escherichia coli MS 185-1]
 gi|301305529|ref|ZP_07211621.1| 50S ribosomal protein L3 [Escherichia coli MS 124-1]
 gi|301325113|ref|ZP_07218647.1| 50S ribosomal protein L3 [Escherichia coli MS 78-1]
 gi|301643860|ref|ZP_07243891.1| 50S ribosomal protein L3 [Escherichia coli MS 146-1]
 gi|306816337|ref|ZP_07450475.1| 50S ribosomal protein L3 [Escherichia coli NC101]
 gi|307140003|ref|ZP_07499359.1| 50S ribosomal protein L3 [Escherichia coli H736]
 gi|307315101|ref|ZP_07594684.1| 50S ribosomal protein L3 [Escherichia coli W]
 gi|309785642|ref|ZP_07680273.1| ribosomal L3 family protein [Shigella dysenteriae 1617]
 gi|309794595|ref|ZP_07689017.1| 50S ribosomal protein L3 [Escherichia coli MS 145-7]
 gi|312968355|ref|ZP_07782565.1| ribosomal L3 family protein [Escherichia coli 2362-75]
 gi|312972419|ref|ZP_07786593.1| ribosomal L3 family protein [Escherichia coli 1827-70]
 gi|331644016|ref|ZP_08345145.1| 50S ribosomal protein L3 [Escherichia coli H736]
 gi|331649117|ref|ZP_08350203.1| 50S ribosomal protein L3 [Escherichia coli M605]
 gi|331654913|ref|ZP_08355912.1| 50S ribosomal protein L3 [Escherichia coli M718]
 gi|331659610|ref|ZP_08360548.1| 50S ribosomal protein L3 [Escherichia coli TA206]
 gi|331664933|ref|ZP_08365834.1| 50S ribosomal protein L3 [Escherichia coli TA143]
 gi|331670149|ref|ZP_08370988.1| 50S ribosomal protein L3 [Escherichia coli TA271]
 gi|331679389|ref|ZP_08380059.1| 50S ribosomal protein L3 [Escherichia coli H591]
 gi|331684962|ref|ZP_08385548.1| 50S ribosomal protein L3 [Escherichia coli H299]
 gi|42560216|sp|P60438|RL3_ECOLI RecName: Full=50S ribosomal protein L3
 gi|42560217|sp|P60439|RL3_ECOL6 RecName: Full=50S ribosomal protein L3
 gi|42560218|sp|P60440|RL3_ECO57 RecName: Full=50S ribosomal protein L3
 gi|42560221|sp|P60447|RL3_SHIFL RecName: Full=50S ribosomal protein L3
 gi|109893554|sp|Q31VV6|RL3_SHIBS RecName: Full=50S ribosomal protein L3
 gi|109893555|sp|Q32B31|RL3_SHIDS RecName: Full=50S ribosomal protein L3
 gi|123048781|sp|Q0TCE1|RL3_ECOL5 RecName: Full=50S ribosomal protein L3
 gi|123084373|sp|Q1R602|RL3_ECOUT RecName: Full=50S ribosomal protein L3
 gi|123342427|sp|Q0SZY3|RL3_SHIF8 RecName: Full=50S ribosomal protein L3
 gi|166233140|sp|A1AGK7|RL3_ECOK1 RecName: Full=50S ribosomal protein L3
 gi|166990934|sp|A7ZSK9|RL3_ECO24 RecName: Full=50S ribosomal protein L3
 gi|166990935|sp|A8A5C5|RL3_ECOHS RecName: Full=50S ribosomal protein L3
 gi|189042843|sp|B1IPX9|RL3_ECOLC RecName: Full=50S ribosomal protein L3
 gi|226725166|sp|B7MCT5|RL3_ECO45 RecName: Full=50S ribosomal protein L3
 gi|226725167|sp|B5YTP1|RL3_ECO5E RecName: Full=50S ribosomal protein L3
 gi|226725168|sp|B7NLN9|RL3_ECO7I RecName: Full=50S ribosomal protein L3
 gi|226725169|sp|B7M1N4|RL3_ECO8A RecName: Full=50S ribosomal protein L3
 gi|226725170|sp|B1X6H1|RL3_ECODH RecName: Full=50S ribosomal protein L3
 gi|226725171|sp|B7NDU1|RL3_ECOLU RecName: Full=50S ribosomal protein L3
 gi|226725172|sp|B6I234|RL3_ECOSE RecName: Full=50S ribosomal protein L3
 gi|226725173|sp|B1LHD4|RL3_ECOSM RecName: Full=50S ribosomal protein L3
 gi|226725175|sp|B7LS40|RL3_ESCF3 RecName: Full=50S ribosomal protein L3
 gi|226730569|sp|B2U2T8|RL3_SHIB3 RecName: Full=50S ribosomal protein L3
 gi|254803671|sp|B7UK44|RL3_ECO27 RecName: Full=50S ribosomal protein L3
 gi|254803672|sp|B7L4K9|RL3_ECO55 RecName: Full=50S ribosomal protein L3
 gi|254803673|sp|B7N0W0|RL3_ECO81 RecName: Full=50S ribosomal protein L3
 gi|259647744|sp|C4ZUH5|RL3_ECOBW RecName: Full=50S ribosomal protein L3
 gi|33357903|pdb|1P85|B Chain B, Real Space Refined Coordinates Of The 50s Subunit Fitted
           Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp
           State Of E. Coli 70s Ribosome
 gi|33357931|pdb|1P86|B Chain B, Real Space Refined Coordinates Of The 50s Subunit Fitted
           Into The Low Resolution Cryo-Em Map Of The
           Initiation-Like State Of E. Coli 70s Ribosome
 gi|83754065|pdb|2AW4|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli At 3.5 A Resolution. This File Contains
           The 50s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|83754121|pdb|2AWB|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli At 3.5 A Resolution. This File Contains
           The 50s Subunit Of The Second 70s Ribosome. The Entire
           Crystal Structure Contains Two 70s Ribosomes And Is
           Described In Remark 400.
 gi|116666574|pdb|1VS6|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With The Antibiotic
           Kasugamyin At 3.5a Resolution. This File Contains The
           50s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|116666626|pdb|1VS8|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With The Antibiotic
           Kasugamyin At 3.5a Resolution. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|116667436|pdb|2GYA|B Chain B, Structure Of The 50s Subunit Of A Pre-Translocational E.
           Coli Ribosome Obtained By Fitting Atomic Models For Rna
           And Protein Components Into Cryo-Em Map Emd-1056
 gi|116667488|pdb|2GYC|B Chain B, Structure Of The 50s Subunit Of A Secm-Stalled E. Coli
           Ribosome Complex Obtained By Fitting Atomic Models For
           Rna And Protein Components Into Cryo-Em Map Emd-1143
 gi|118138094|pdb|2I2T|D Chain D, Crystal Structure Of Ribosome With Messenger Rna And The
           Anticodon Stem-Loop Of P-Site Trna. This File Contains
           The 50s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|118138148|pdb|2I2V|D Chain D, Crystal Structure Of Ribosome With Messenger Rna And The
           Anticodon Stem-Loop Of P-Site Trna. This File Contains
           The 50s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|119390348|pdb|2J28|D Chain D, Model Of E. Coli Srp Bound To 70s Rncs
 gi|157836049|pdb|2QOV|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Spectinomycin. This
           File Contains The 50s Subunit Of The First 70s Ribosome.
           The Entire Crystal Structure Contains Two 70s Ribosomes.
 gi|157836101|pdb|2QOX|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Spectinomycin. This
           File Contains The 50s Subunit Of The Second 70s
           Ribosome. The Entire Crystal Structure Contains Two 70s
           Ribosomes.
 gi|157836153|pdb|2QOZ|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Spectinomycin And
           Neomycin. This File Contains The 50s Subunit Of The
           First 70s Ribosome, With Neomycin Bound. The Entire
           Crystal Structure Contains Two 70s Ribosomes.
 gi|157836205|pdb|2QP1|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Spectinomycin And
           Neomycin. This File Contains The 50s Subunit Of The
           Second 70s Ribosome, With Neomycin Bound. The Entire
           Crystal Structure Contains Two 70s Ribosomes.
 gi|158429724|pdb|2QAM|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Neomycin. This File
           Contains The 50s Subunit Of The First 70s Ribosome, With
           Neomycin Bound. The Entire Crystal Structure Contains
           Two 70s Ribosomes And Is Described In Remark 400.
 gi|158429776|pdb|2QAO|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Neomycin. This File
           Contains The 50s Subunit Of The Second 70s Ribosome,
           With Neomycin Bound. The Entire Crystal Structure
           Contains Two 70s Ribosomes And Is Described In Remark
           400.
 gi|158429834|pdb|2QBA|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Gentamicin. This File
           Contains The 50s Subunit Of The First 70s Ribosome, With
           Gentamicin Bound. The Entire Crystal Structure Contains
           Two 70s Ribosomes And Is Described In Remark 400.
 gi|158429886|pdb|2QBC|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Gentamicin. This File
           Contains The 50s Subunit Of The Second 70s Ribosome,
           With Gentamicin Bound. The Entire Crystal Structure
           Contains Two 70s Ribosomes And Is Described In Remark
           400.
 gi|158429938|pdb|2QBE|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Ribosome Recycling
           Factor (Rrf). This File Contains The 50s Subunit Of The
           First 70s Ribosome, With Rrf Bound. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|158429991|pdb|2QBG|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Ribosome Recycling
           Factor (Rrf). This File Contains The 50s Subunit Of The
           Second 70s Ribosome, With Rrf Bound. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|158430044|pdb|2QBI|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Gentamicin And Ribosome
           Recycling Factor (Rrf). This File Contains The 50s
           Subunit Of The First 70s Ribosome, With Gentamicin And
           Rrf Bound. The Entire Crystal Structure Contains Two 70s
           Ribosomes And Is Described In Remark 400.
 gi|158430097|pdb|2QBK|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Gentamicin And Ribosome
           Recycling Factor (Rrf). This File Contains The 50s
           Subunit Of The Second 70s Ribosome, With Gentamicin And
           Rrf Bound. The Entire Crystal Structure Contains Two 70s
           Ribosomes And Is Described In Remark 400.
 gi|158431397|pdb|2Z4L|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Paromomycin And
           Ribosome Recycling Factor (Rrf). This File Contains The
           50s Subunit Of The First 70s Ribosome, With Paromomycin
           And Rrf Bound. The Entire Crystal Structure Contains Two
           70s Ribosomes And Is Described In Remark 400.
 gi|158431450|pdb|2Z4N|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Paromomycin And
           Ribosome Recycling Factor (Rrf). This File Contains The
           50s Subunit Of The Second 70s Ribosome, With Paromomycin
           And Rrf Bound. The Entire Crystal Structure Contains Two
           70s Ribosomes And Is Described In Remark 400.
 gi|168988734|pdb|2VHM|D Chain D, Structure Of Pdf Binding Helix In Complex With The
           Ribosome (Part 1 Of 4)
 gi|168988765|pdb|2VHN|D Chain D, Structure Of Pdf Binding Helix In Complex With The
           Ribosome. (Part 2 Of 4)
 gi|169404606|pdb|2RDO|D Chain D, 50s Subunit With Ef-G(Gdpnp) And Rrf Bound
 gi|197107304|pdb|3DF2|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Hygromycin B. This File
           Contains The 50s Subunit Of The First 70s Ribosome. The
           Entire Crystal Structure Contains Two 70s Ribosomes.
 gi|197107356|pdb|3DF4|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Hygromycin B. This File
           Contains The 50s Subunit Of The Second 70s Ribosome. The
           Entire Crystal Structure Contains Two 70s Ribosomes.
 gi|209870357|pdb|3BBX|D Chain D, The Hsp15 Protein Fitted Into The Low Resolution Cryo-Em
           Map 50s.Nc-Trna.Hsp15 Complex
 gi|224510762|pdb|3FIK|D Chain D, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry
           Consists Of The 50s Subunit.
 gi|251837155|pdb|3IY9|C Chain C, Leishmania Tarentolae Mitochondrial Large Ribosomal
           Subunit Model
 gi|256032397|pdb|3E1B|Y Chain Y, Structure Of The 50s Subunit Of E. Coli Ribosome In Pre-
           Accommodation State
 gi|256032454|pdb|3E1D|Y Chain Y, Structure Of The 50s Subunit Of E. Coli Ribosome In Post-
           Accommodation State
 gi|257097345|pdb|3I1N|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|257097397|pdb|3I1P|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|257097451|pdb|3I1R|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|257097505|pdb|3I1T|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|257097560|pdb|3I20|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|257097615|pdb|3I22|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|290560335|pdb|3KCR|D Chain D, Ribosome-Secy Complex. This Entry 3kcr Contains 50s
           Ribosomal Subnit. The 30s Ribosomal Subunit Can Be Found
           In Pdb Entry 3kc4
 gi|294662253|pdb|2WWQ|D Chain D, E.Coli 70s Ribosome Stalled During Translation Of Tnac
           Leader Peptide. This File Contains The 50s, The P-Site
           Trna And The Tnac Leader Peptide (Part 2 Of 2).
 gi|308198358|pdb|1VT2|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Cem-101. This File Contains The 50s Subunit Of The
           Second 70s Ribosome.
 gi|308198732|pdb|3ORB|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Cem-101. This File Contains The 50s Subunit Of The First
           70s Ribosome Bound To Cem-101.
 gi|308388010|pdb|3OFQ|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Erythromycin. This File Contains The 50s Subunit Of The
           Second 70s Ribosome.
 gi|308388041|pdb|3OFR|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Erythromycin. This File Contains The 50s Subunit Of The
           First 70s Ribosome With Erthromycin Bound.
 gi|309320068|pdb|3OFC|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Chloramphenicol. This File Contains The 50s Subunit Of
           The First 70s Ribosome With Chloramphenicol Bound.
 gi|309320099|pdb|3OFD|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Chloramphenicol. This File Contains The 50s Subunit Of
           The Second 70s Ribosome.
 gi|309320172|pdb|3OFZ|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Clindamycin. This File Contains The 50s Subunit Of The
           First 70s Ribosome Bound To Clindamycin.
 gi|309320203|pdb|3OG0|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Clindamycin. This File Contains The 50s Subunit Of The
           Second 70s Ribosome.
 gi|315113657|pdb|3OAS|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Telithromycin. This File Contains The 50s Subunit Of The
           Second 70s Ribosome.
 gi|315113688|pdb|3OAT|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Telithromycin. This File Contains The 50s Subunit Of The
           First 70s Ribosome With Telithromycin Bound.
 gi|326634213|pdb|3IZT|E Chain E, Structural Insights Into Cognate Vs. Near-Cognate
           Discrimination During Decoding. This Entry Contains The
           Large Subunit Of A Ribosome Programmed With A
           Near-Cognate Codon.
 gi|326634246|pdb|3IZU|E Chain E, Structural Insights Into Cognate Vs. Near-Cognate
           Discrimination During Decoding. This Entry Contains The
           Large Subunit Of A Ribosome Programmed With A Cognate
           Codon
 gi|329666019|pdb|3J01|D Chain D, Structure Of The Ribosome-Secye Complex In The Membrane
           Environment
 gi|12517952|gb|AAG58441.1|AE005557_10 50S ribosomal subunit protein L3 [Escherichia coli O157:H7 str.
           EDL933]
 gi|26110343|gb|AAN82529.1|AE016767_289 50S ribosomal protein L3 [Escherichia coli CFT073]
 gi|42827|emb|CAA26460.1| unnamed protein product [Escherichia coli]
 gi|606254|gb|AAA58117.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12
           substr. MG1655]
 gi|1789716|gb|AAC76345.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12
           substr. MG1655]
 gi|13363658|dbj|BAB37608.1| 50S ribosomal subunit protein L3 [Escherichia coli O157:H7 str.
           Sakai]
 gi|24053796|gb|AAN44815.1| 50S ribosomal subunit protein L3 [Shigella flexneri 2a str. 301]
 gi|30043641|gb|AAP19361.1| 50S ribosomal subunit protein L3 [Shigella flexneri 2a str. 2457T]
 gi|81242764|gb|ABB63474.1| 50S ribosomal subunit protein L3 [Shigella dysenteriae Sd197]
 gi|81247094|gb|ABB67802.1| 50S ribosomal subunit protein L3 [Shigella boydii Sb227]
 gi|85676721|dbj|BAE77971.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K12 substr.
           W3110]
 gi|91074331|gb|ABE09212.1| 50S ribosomal subunit protein L3 [Escherichia coli UTI89]
 gi|110345151|gb|ABG71388.1| 50S ribosomal protein L3 [Escherichia coli 536]
 gi|110616715|gb|ABF05382.1| 50S ribosomal subunit protein L3 [Shigella flexneri 5 str. 8401]
 gi|115514722|gb|ABJ02797.1| 50S ribosomal subunit protein L3 [Escherichia coli APEC O1]
 gi|157068474|gb|ABV07729.1| ribosomal protein L3 [Escherichia coli HS]
 gi|157078636|gb|ABV18344.1| ribosomal protein L3 [Escherichia coli E24377A]
 gi|169753372|gb|ACA76071.1| ribosomal protein L3 [Escherichia coli ATCC 8739]
 gi|169890674|gb|ACB04381.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12
           substr. DH10B]
 gi|170518037|gb|ACB16215.1| ribosomal protein L3 [Escherichia coli SMS-3-5]
 gi|187430669|gb|ACD09943.1| ribosomal protein L3 [Shigella boydii CDC 3083-94]
 gi|188013518|gb|EDU51640.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4113]
 gi|188490342|gb|EDU65445.1| ribosomal protein L3 [Escherichia coli 53638]
 gi|189359274|gb|EDU77693.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4401]
 gi|189361771|gb|EDU80190.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4486]
 gi|189374499|gb|EDU92915.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC869]
 gi|190908143|gb|EDV67734.1| ribosomal protein L3 [Escherichia coli F11]
 gi|208726287|gb|EDZ75888.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4206]
 gi|208733387|gb|EDZ82074.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4045]
 gi|208738455|gb|EDZ86137.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4042]
 gi|209160382|gb|ACI37815.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4115]
 gi|209757038|gb|ACI76831.1| 50S ribosomal subunit protein L3 [Escherichia coli]
 gi|209757040|gb|ACI76832.1| 50S ribosomal subunit protein L3 [Escherichia coli]
 gi|209757042|gb|ACI76833.1| 50S ribosomal subunit protein L3 [Escherichia coli]
 gi|209757044|gb|ACI76834.1| 50S ribosomal subunit protein L3 [Escherichia coli]
 gi|209757046|gb|ACI76835.1| 50S ribosomal subunit protein L3 [Escherichia coli]
 gi|209914045|dbj|BAG79119.1| 50S ribosomal protein L3 [Escherichia coli SE11]
 gi|215266692|emb|CAS11131.1| 50S ribosomal subunit protein L3 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217321934|gb|EEC30358.1| ribosomal protein L3 [Escherichia coli O157:H7 str. TW14588]
 gi|218353744|emb|CAV00038.1| 50S ribosomal subunit protein L3 [Escherichia coli 55989]
 gi|218358136|emb|CAQ90783.1| 50S ribosomal subunit protein L3 [Escherichia fergusonii ATCC
           35469]
 gi|218362645|emb|CAR00271.1| 50S ribosomal subunit protein L3 [Escherichia coli IAI1]
 gi|218367150|emb|CAR04924.1| 50S ribosomal subunit protein L3 [Escherichia coli S88]
 gi|218372068|emb|CAR19928.1| 50S ribosomal subunit protein L3 [Escherichia coli IAI39]
 gi|218429170|emb|CAR09978.1| 50S ribosomal subunit protein L3 [Escherichia coli ED1a]
 gi|218434024|emb|CAR14941.1| 50S ribosomal subunit protein L3 [Escherichia coli UMN026]
 gi|222035029|emb|CAP77772.1| 50S ribosomal protein L3 [Escherichia coli LF82]
 gi|226838987|gb|EEH71010.1| 50S ribosomal protein L3 [Escherichia sp. 1_1_43]
 gi|226902314|gb|EEH88573.1| ribosomal protein L3 [Escherichia sp. 3_2_53FAA]
 gi|227839595|gb|EEJ50061.1| 50S ribosomal protein L3 [Escherichia coli 83972]
 gi|238859868|gb|ACR61866.1| 50S ribosomal subunit protein L3 [Escherichia coli BW2952]
 gi|242378847|emb|CAQ33639.1| 50S ribosomal subunit protein L3, subunit of 50S ribosomal subunit
           and ribosome [Escherichia coli BL21(DE3)]
 gi|253322900|gb|ACT27502.1| ribosomal protein L3 [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253975149|gb|ACT40820.1| 50S ribosomal protein L3 [Escherichia coli B str. REL606]
 gi|253979305|gb|ACT44975.1| 50S ribosomal protein L3 [Escherichia coli BL21(DE3)]
 gi|254594657|gb|ACT74018.1| 50S ribosomal subunit protein L3 [Escherichia coli O157:H7 str.
           TW14359]
 gi|257756090|dbj|BAI27592.1| 50S ribosomal subunit protein L3 [Escherichia coli O26:H11 str.
           11368]
 gi|257761265|dbj|BAI32762.1| 50S ribosomal subunit protein L3 [Escherichia coli O103:H2 str.
           12009]
 gi|257766419|dbj|BAI37914.1| 50S ribosomal subunit protein L3 [Escherichia coli O111:H- str.
           11128]
 gi|260447661|gb|ACX38083.1| ribosomal protein L3 [Escherichia coli DH1]
 gi|281180355|dbj|BAI56685.1| 50S ribosomal protein L3 [Escherichia coli SE15]
 gi|281602685|gb|ADA75669.1| 50S ribosomal protein L3 [Shigella flexneri 2002017]
 gi|290764551|gb|ADD58512.1| 50S ribosomal protein L3 [Escherichia coli O55:H7 str. CB9615]
 gi|291321764|gb|EFE61195.1| 50S ribosomal protein L3 [Escherichia coli B088]
 gi|291425728|gb|EFE98762.1| 50S ribosomal protein L3 [Escherichia coli FVEC1412]
 gi|291431313|gb|EFF04298.1| 50S ribosomal protein L3 [Escherichia coli B185]
 gi|291468386|gb|EFF10879.1| 50S ribosomal protein L3 [Escherichia coli B354]
 gi|294489959|gb|ADE88715.1| ribosomal protein L3 [Escherichia coli IHE3034]
 gi|298276493|gb|EFI18011.1| 50S ribosomal protein L3 [Escherichia coli FVEC1302]
 gi|299881660|gb|EFI89871.1| 50S ribosomal protein L3 [Escherichia coli MS 196-1]
 gi|300301917|gb|EFJ58302.1| 50S ribosomal protein L3 [Escherichia coli MS 185-1]
 gi|300309009|gb|EFJ63529.1| 50S ribosomal protein L3 [Escherichia coli MS 200-1]
 gi|300318234|gb|EFJ68018.1| 50S ribosomal protein L3 [Escherichia coli MS 175-1]
 gi|300359499|gb|EFJ75369.1| 50S ribosomal protein L3 [Escherichia coli MS 198-1]
 gi|300399526|gb|EFJ83064.1| 50S ribosomal protein L3 [Escherichia coli MS 69-1]
 gi|300404441|gb|EFJ87979.1| 50S ribosomal protein L3 [Escherichia coli MS 84-1]
 gi|300409402|gb|EFJ92940.1| 50S ribosomal protein L3 [Escherichia coli MS 45-1]
 gi|300414554|gb|EFJ97864.1| 50S ribosomal protein L3 [Escherichia coli MS 115-1]
 gi|300421719|gb|EFK05030.1| 50S ribosomal protein L3 [Escherichia coli MS 182-1]
 gi|300453788|gb|EFK17408.1| 50S ribosomal protein L3 [Escherichia coli MS 116-1]
 gi|300459474|gb|EFK22967.1| 50S ribosomal protein L3 [Escherichia coli MS 21-1]
 gi|300460037|gb|EFK23530.1| 50S ribosomal protein L3 [Escherichia coli MS 187-1]
 gi|300524643|gb|EFK45712.1| 50S ribosomal protein L3 [Escherichia coli MS 119-7]
 gi|300532362|gb|EFK53424.1| 50S ribosomal protein L3 [Escherichia coli MS 107-1]
 gi|300839224|gb|EFK66984.1| 50S ribosomal protein L3 [Escherichia coli MS 124-1]
 gi|300847992|gb|EFK75752.1| 50S ribosomal protein L3 [Escherichia coli MS 78-1]
 gi|301077763|gb|EFK92569.1| 50S ribosomal protein L3 [Escherichia coli MS 146-1]
 gi|305850733|gb|EFM51190.1| 50S ribosomal protein L3 [Escherichia coli NC101]
 gi|306905450|gb|EFN35985.1| 50S ribosomal protein L3 [Escherichia coli W]
 gi|307555407|gb|ADN48182.1| 50S ribosomal subunit protein L3 [Escherichia coli ABU 83972]
 gi|308121645|gb|EFO58907.1| 50S ribosomal protein L3 [Escherichia coli MS 145-7]
 gi|308926762|gb|EFP72238.1| ribosomal L3 family protein [Shigella dysenteriae 1617]
 gi|309703732|emb|CBJ03073.1| 50S ribosomal subunit protein L3 [Escherichia coli ETEC H10407]
 gi|310334796|gb|EFQ01001.1| ribosomal L3 family protein [Escherichia coli 1827-70]
 gi|312287180|gb|EFR15090.1| ribosomal L3 family protein [Escherichia coli 2362-75]
 gi|312947871|gb|ADR28698.1| 50S ribosomal protein L3 [Escherichia coli O83:H1 str. NRG 857C]
 gi|313647370|gb|EFS11822.1| ribosomal L3 family protein [Shigella flexneri 2a str. 2457T]
 gi|315062612|gb|ADT76939.1| 50S ribosomal subunit protein L3 [Escherichia coli W]
 gi|315137895|dbj|BAJ45054.1| 50S ribosomal protein L3 [Escherichia coli DH1]
 gi|315255903|gb|EFU35871.1| 50S ribosomal protein L3 [Escherichia coli MS 85-1]
 gi|315284605|gb|EFU44050.1| 50S ribosomal protein L3 [Escherichia coli MS 110-3]
 gi|315292363|gb|EFU51715.1| 50S ribosomal protein L3 [Escherichia coli MS 153-1]
 gi|315298618|gb|EFU57873.1| 50S ribosomal protein L3 [Escherichia coli MS 16-3]
 gi|315616997|gb|EFU97609.1| ribosomal L3 family protein [Escherichia coli 3431]
 gi|320173961|gb|EFW49137.1| LSU ribosomal protein L3p (L3e) [Shigella dysenteriae CDC 74-1112]
 gi|320180154|gb|EFW55093.1| LSU ribosomal protein L3p (L3e) [Shigella boydii ATCC 9905]
 gi|320187038|gb|EFW61750.1| LSU ribosomal protein L3p (L3e) [Shigella flexneri CDC 796-83]
 gi|320191649|gb|EFW66299.1| LSU ribosomal protein L3p (L3e) [Escherichia coli O157:H7 str.
           EC1212]
 gi|320639625|gb|EFX09219.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 str. G5101]
 gi|320645123|gb|EFX14139.1| 50S ribosomal protein L3 [Escherichia coli O157:H- str. 493-89]
 gi|320650434|gb|EFX18900.1| 50S ribosomal protein L3 [Escherichia coli O157:H- str. H 2687]
 gi|320655959|gb|EFX23879.1| 50S ribosomal protein L3 [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320661411|gb|EFX28826.1| 50S ribosomal protein L3 [Escherichia coli O55:H7 str. USDA 5905]
 gi|320666433|gb|EFX33416.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 str. LSU-61]
 gi|323154158|gb|EFZ40361.1| ribosomal L3 family protein [Escherichia coli EPECa14]
 gi|323162999|gb|EFZ48834.1| ribosomal protein L3 family protein [Escherichia coli E128010]
 gi|323179144|gb|EFZ64718.1| ribosomal protein L3 family protein [Escherichia coli 1180]
 gi|323182798|gb|EFZ68199.1| ribosomal protein L3 family protein [Escherichia coli 1357]
 gi|323189075|gb|EFZ74359.1| ribosomal protein L3 family protein [Escherichia coli RN587/1]
 gi|323376801|gb|ADX49069.1| 50S ribosomal protein L3 [Escherichia coli KO11]
 gi|323934482|gb|EGB30890.1| 50S ribosomal protein L3 [Escherichia coli E1520]
 gi|323939258|gb|EGB35470.1| 50S ribosomal protein L3 [Escherichia coli E482]
 gi|323944259|gb|EGB40335.1| 50S ribosomal protein L3 [Escherichia coli H120]
 gi|323950234|gb|EGB46116.1| 50S ribosomal protein L3 [Escherichia coli H252]
 gi|323954557|gb|EGB50340.1| 50S ribosomal protein L3 [Escherichia coli H263]
 gi|323959529|gb|EGB55182.1| 50S ribosomal protein L3 [Escherichia coli H489]
 gi|323970124|gb|EGB65398.1| 50S ribosomal protein L3 [Escherichia coli TA007]
 gi|323974727|gb|EGB69840.1| 50S ribosomal protein L3 [Escherichia coli TW10509]
 gi|324009011|gb|EGB78230.1| 50S ribosomal protein L3 [Escherichia coli MS 57-2]
 gi|324014936|gb|EGB84155.1| 50S ribosomal protein L3 [Escherichia coli MS 60-1]
 gi|324017862|gb|EGB87081.1| 50S ribosomal protein L3 [Escherichia coli MS 117-3]
 gi|324111999|gb|EGC05978.1| 50S ribosomal protein L3 [Escherichia fergusonii B253]
 gi|324116290|gb|EGC10210.1| 50S ribosomal protein L3 [Escherichia coli E1167]
 gi|325498885|gb|EGC96744.1| 50S ribosomal protein L3 [Escherichia fergusonii ECD227]
 gi|326344552|gb|EGD68301.1| LSU ribosomal protein L3p (L3e) [Escherichia coli O157:H7 str.
           1125]
 gi|327250968|gb|EGE62661.1| ribosomal protein L3 family protein [Escherichia coli STEC_7v]
 gi|330909362|gb|EGH37876.1| LSU ribosomal protein L3p (L3e) [Escherichia coli AA86]
 gi|331036310|gb|EGI08536.1| 50S ribosomal protein L3 [Escherichia coli H736]
 gi|331041615|gb|EGI13759.1| 50S ribosomal protein L3 [Escherichia coli M605]
 gi|331046928|gb|EGI19006.1| 50S ribosomal protein L3 [Escherichia coli M718]
 gi|331052825|gb|EGI24858.1| 50S ribosomal protein L3 [Escherichia coli TA206]
 gi|331057443|gb|EGI29429.1| 50S ribosomal protein L3 [Escherichia coli TA143]
 gi|331062211|gb|EGI34131.1| 50S ribosomal protein L3 [Escherichia coli TA271]
 gi|331072561|gb|EGI43886.1| 50S ribosomal protein L3 [Escherichia coli H591]
 gi|331077333|gb|EGI48545.1| 50S ribosomal protein L3 [Escherichia coli H299]
 gi|332085471|gb|EGI90637.1| ribosomal protein L3 family protein [Shigella boydii 5216-82]
 gi|332086009|gb|EGI91173.1| ribosomal protein L3 family protein [Shigella dysenteriae 155-74]
 gi|332090310|gb|EGI95408.1| ribosomal protein L3 family protein [Shigella boydii 3594-74]
 gi|332104227|gb|EGJ07573.1| 50S ribosomal subunit protein L3 [Shigella sp. D9]
 gi|223116|prf||0509226A protein L3
          Length = 209

 Score =  170 bits (431), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 93/202 (46%), Positives = 128/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|285017320|ref|YP_003375031.1| 50s ribosomal protein l3 [Xanthomonas albilineans GPE PC73]
 gi|283472538|emb|CBA15043.1| probable 50s ribosomal protein l3 [Xanthomonas albilineans]
          Length = 216

 Score =  170 bits (431), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/211 (45%), Positives = 130/211 (61%), Gaps = 4/211 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G V RK GM+ V+  +GR IPVT++     ++   +T++ +GY AVQ+  G  +V  V+K
Sbjct: 8   GFVGRKAGMSRVFTEDGRSIPVTLIEATPNRITQLKTVENDGYSAVQITVGTRRVALVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           P  G F+   V   + L+EFRV+ D  L    +G       F VGQ VDV G+T GKGF 
Sbjct: 68  PAAGHFAKAKVEAGRGLWEFRVE-DAQLGDFAIGGEIKVDIFAVGQKVDVQGVTKGKGFQ 126

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNF    ATHG S+SHR  GS G RQ PGRVF  KKM+G MG  + + +NLEVV 
Sbjct: 127 GTIKRHNFRMGDATHGNSLSHRVGGSLGQRQTPGRVFLGKKMSGHMGAVQQSTQNLEVVK 186

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VD +RGLI ++G VPGA     ++VR + K+
Sbjct: 187 VDVERGLIAIRGAVPGAAGGD-VIVRPASKA 216


>gi|311693271|gb|ADP96144.1| 50S ribosomal protein L3 [marine bacterium HP15]
          Length = 212

 Score =  170 bits (431), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 90/199 (45%), Positives = 126/199 (63%), Gaps = 1/199 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  +G+ +PVTV+ ++  ++   +TL+ +GY AVQV  G  +   
Sbjct: 1   MAIGVVGRKAGMTRIFTEDGQALPVTVIEVEPNRITQLKTLESDGYRAVQVTVGTRRSSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + ++EFR+   + + L  G   + S F  GQ+VD  G + GKG
Sbjct: 61  VTKSEAGHFAKAGVEAGRGMWEFRLADGEGEDLAAGGEITASVFEDGQVVDAIGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG+MG  +VTV+NL++
Sbjct: 121 FQGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQMGNAQVTVQNLKI 180

Query: 180 VSVDDKRGLILVKGCVPGA 198
           V VD +R L+LV G VPGA
Sbjct: 181 VRVDAERNLLLVSGAVPGA 199


>gi|253998014|ref|YP_003050077.1| 50S ribosomal protein L3 [Methylovorus sp. SIP3-4]
 gi|313200081|ref|YP_004038739.1| 50S ribosomal protein L3 [Methylovorus sp. MP688]
 gi|253984693|gb|ACT49550.1| ribosomal protein L3 [Methylovorus sp. SIP3-4]
 gi|312439397|gb|ADQ83503.1| ribosomal protein L3 [Methylovorus sp. MP688]
          Length = 214

 Score =  170 bits (431), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  EG  IPVTVL +   +V   +T   +GY  +QV  GE +   
Sbjct: 1   MSLGLIGRKVGMTRVFTDEGESIPVTVLEVVPNRVTQVKTPSSDGYAGLQVAHGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K + G ++   V+    + EF V +D      VG   +   F  GQ VDVTG+++GKG
Sbjct: 61  VTKALAGHYAKAGVAAGSGIKEFAVAEDVLANYAVGGQITVELFQAGQYVDVTGVSLGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+GA+KRHNF   RA+HG S SH   GS G  QDPGRVF  K+M G +G  + TV+NL++
Sbjct: 121 FAGAIKRHNFSSNRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMPGHLGAVKTTVQNLQI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+L+KG VPG+K    ++VR + K+
Sbjct: 181 VRVDAERNLLLIKGAVPGSKGGD-VVVRPAVKA 212


>gi|304399291|ref|ZP_07381157.1| 50S ribosomal protein L3 [Pantoea sp. aB]
 gi|308188357|ref|YP_003932488.1| 50S ribosomal protein L3 [Pantoea vagans C9-1]
 gi|304353217|gb|EFM17598.1| 50S ribosomal protein L3 [Pantoea sp. aB]
 gi|308058867|gb|ADO11039.1| 50S ribosomal protein L3 [Pantoea vagans C9-1]
          Length = 209

 Score =  170 bits (431), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/202 (45%), Positives = 128/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L+ +GY A+QV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKGLENDGYQAIQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR  + ++   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRTAEGEEY-SVGQSISVEIFAEVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|329938232|ref|ZP_08287683.1| 50S ribosomal protein L3 [Streptomyces griseoaurantiacus M045]
 gi|329302721|gb|EGG46611.1| 50S ribosomal protein L3 [Streptomyces griseoaurantiacus M045]
          Length = 214

 Score =  170 bits (431), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 95/210 (45%), Positives = 127/210 (60%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      V   RT D +GY +VQ+  G+   + V+K
Sbjct: 7   GILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDADGYESVQIAFGDIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G 
Sbjct: 67  PLKGHFAKADVTPRRHLVEIRTA-DAAEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +VD
Sbjct: 126 MKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++GL+L+KG VPG      +LVR + K A
Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214


>gi|74313839|ref|YP_312258.1| 50S ribosomal protein L3 [Shigella sonnei Ss046]
 gi|109893556|sp|Q3YWT9|RL3_SHISS RecName: Full=50S ribosomal protein L3
 gi|73857316|gb|AAZ90023.1| 50S ribosomal subunit protein L3 [Shigella sonnei Ss046]
          Length = 209

 Score =  170 bits (431), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 93/202 (46%), Positives = 127/202 (62%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K GMT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K   V+K
Sbjct: 3   GLVGKKAGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFAEVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|328951236|ref|YP_004368571.1| 50S ribosomal protein L3 [Marinithermus hydrothermalis DSM 14884]
 gi|328451560|gb|AEB12461.1| 50S ribosomal protein L3 [Marinithermus hydrothermalis DSM 14884]
          Length = 206

 Score =  170 bits (431), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/210 (46%), Positives = 128/210 (60%), Gaps = 7/210 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  K+GMT ++  + R IPVTV+    C VV  RT++K+GY AVQ+G    K + V+K
Sbjct: 3   GILGAKIGMTQIWK-DDRAIPVTVILAGPCPVVQRRTVEKDGYEAVQLGFLPQKPQRVNK 61

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           PM+G F    V P + L E R        P G V + S F  G+ VDVTG++ G+GF+G 
Sbjct: 62  PMKGHFEKAGVEPVRYLREIR-----GFNPEGDVVTVSIFQPGERVDVTGISKGRGFTGV 116

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR  F G   +HG    HR  GS G R+ PGRV+K KKMAGR G  RVTV+NLEVV V 
Sbjct: 117 MKRWGFAGGPDSHGAHRIHRHPGSIGQRKTPGRVYKGKKMAGRYGAERVTVQNLEVVDVI 176

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +  LILVKG VPG      +++R+S K A
Sbjct: 177 AEENLILVKGAVPGP-NGGLVILRESVKGA 205


>gi|307628355|gb|ADN72659.1| 50S ribosomal protein L3 [Escherichia coli UM146]
          Length = 209

 Score =  170 bits (431), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/202 (45%), Positives = 128/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+V+ VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVIRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|261346935|ref|ZP_05974579.1| 50S ribosomal protein L3 [Providencia rustigianii DSM 4541]
 gi|282565000|gb|EFB70535.1| 50S ribosomal protein L3 [Providencia rustigianii DSM 4541]
          Length = 209

 Score =  170 bits (431), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/202 (45%), Positives = 128/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++N +V   +T + +GY A+QV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKTAETDGYNAIQVTTGSKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L EFR ++  +    G   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRILREFRTEEGTEF-KAGESISVEIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  ++ I+
Sbjct: 182 AERNLLLVKGAVPGATGSNLIV 203


>gi|219681870|ref|YP_002468256.1| 50S ribosomal protein L3 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682425|ref|YP_002468809.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471575|ref|ZP_05635574.1| 50S ribosomal protein L3 [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|254803660|sp|B8D9U7|RL3_BUCA5 RecName: Full=50S ribosomal protein L3
 gi|254803661|sp|B8D849|RL3_BUCAT RecName: Full=50S ribosomal protein L3
 gi|219622158|gb|ACL30314.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624713|gb|ACL30868.1| 50S ribosomal protein L3 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086246|gb|ADP66328.1| 50S ribosomal protein L3 [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086823|gb|ADP66904.1| 50S ribosomal protein L3 [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087410|gb|ADP67490.1| 50S ribosomal protein L3 [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087905|gb|ADP67984.1| 50S ribosomal protein L3 [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 209

 Score =  170 bits (430), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 88/195 (45%), Positives = 127/195 (65%), Gaps = 1/195 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  EG  IPVTV+ L   ++   + ++ + Y A+QV  G  K   ++K
Sbjct: 3   GLVGKKIGMTRIFTEEGTSIPVTVIELKENRITQVKNINTDLYCAIQVTTGIKKSNRLNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P + L+EFR  K+++   +G   + + F   + VD+TG++ GKGFSG 
Sbjct: 63  PQSGHFLKSGVTPGRGLWEFRTDKNNNF-KIGQSITINIFNNVKKVDITGISKGKGFSGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG++G  RVTV++L +V +D
Sbjct: 122 VKRWNFHTQDATHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGQLGNTRVTVQSLNIVRID 181

Query: 184 DKRGLILVKGCVPGA 198
           ++R L+LVKG VPGA
Sbjct: 182 ERRNLLLVKGAVPGA 196


>gi|293393311|ref|ZP_06637625.1| 50S ribosomal protein L3 [Serratia odorifera DSM 4582]
 gi|291424221|gb|EFE97436.1| 50S ribosomal protein L3 [Serratia odorifera DSM 4582]
          Length = 209

 Score =  170 bits (430), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/202 (45%), Positives = 127/202 (62%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + LD +GY A+QV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLDNDGYRAIQVTTGSKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+++  +    G   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLEEGQEF-AAGQEISVEIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG +G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA   + I+
Sbjct: 182 AERNLLLVKGAVPGATGGNLIV 203


>gi|323144964|ref|ZP_08079524.1| 50S ribosomal protein L3 [Succinatimonas hippei YIT 12066]
 gi|322415243|gb|EFY06017.1| 50S ribosomal protein L3 [Succinatimonas hippei YIT 12066]
          Length = 212

 Score =  170 bits (430), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/213 (45%), Positives = 134/213 (62%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RKLGMT V+N +G+ +PVTV+ ++  +V   + ++ +GY A+QV  GE K   
Sbjct: 1   MSIGLIGRKLGMTRVFNQDGKSVPVTVIQVEANRVTQIKNIETDGYCAIQVTTGERKTSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++K   G F+   V+  + L+EFR++  + +   VGS      F   + VDVTG + GKG
Sbjct: 61  MTKAEIGHFAKTGVAAGRGLWEFRLEPSELEAYQVGSEIKVDAFKDVKKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            +G +KR+NF     THG S SHR  GSTG  Q PGRVFK KKM GRMG  RVTV  L++
Sbjct: 121 TAGTVKRYNFRTQDFTHGNSRSHRVPGSTGQNQTPGRVFKGKKMVGRMGNERVTVMCLDL 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LVKG VPGA  N  ++VR S K+
Sbjct: 181 VRVDSERNLLLVKGAVPGA-NNGDLIVRPSVKA 212


>gi|88812757|ref|ZP_01128003.1| 50S ribosomal protein L3 [Nitrococcus mobilis Nb-231]
 gi|88789995|gb|EAR21116.1| 50S ribosomal protein L3 [Nitrococcus mobilis Nb-231]
          Length = 219

 Score =  170 bits (430), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/219 (44%), Positives = 134/219 (61%), Gaps = 14/219 (6%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++  +G  +PVTV+     ++  HR  DK+GY A+QV  G  +   
Sbjct: 1   MAIGIVGRKCGMTRLFAEDGTSVPVTVVEAAPNRITQHRREDKDGYSAIQVTTGTRRPAR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQK-------DDDLLPVGSVFSPSYFTVGQLVDVTG 113
           V+KP  G  + V V   + L+EFR+ +       D++ L V        F VGQ VDVT 
Sbjct: 61  VNKPQAGHVAKVGVEMGRGLWEFRLPRGVETESSDNNELRV------DQFVVGQRVDVTS 114

Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
            T GKGF+G +KRH+F    ATHG S+SHR+ GS G  QDPGRVFK K MAG +G  R T
Sbjct: 115 RTKGKGFAGTVKRHHFRTQDATHGNSLSHRAPGSIGQNQDPGRVFKGKAMAGHLGAVRRT 174

Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V+NLE+V VD +R L+++KG VPG+   + ++VR + K+
Sbjct: 175 VQNLEIVRVDTERNLLIIKGAVPGS-PGADVVVRPAIKT 212


>gi|149376686|ref|ZP_01894445.1| 50S ribosomal protein L3 [Marinobacter algicola DG893]
 gi|149359059|gb|EDM47524.1| 50S ribosomal protein L3 [Marinobacter algicola DG893]
          Length = 212

 Score =  170 bits (430), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 88/199 (44%), Positives = 127/199 (63%), Gaps = 1/199 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++  +G+ + VTV+ ++  ++   +TL+ +GY AVQV  G+ +   
Sbjct: 1   MAIGIVGRKAGMTRIFTEDGQAVSVTVIEVEPNRITQLKTLESDGYRAVQVTVGKRRSSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G ++   V   + L+EFR+   + + L  G   + S F  GQ+VD  G + GKG
Sbjct: 61  VTKSEAGHYAKAGVEAGRGLWEFRLADGEGEELAAGGEITASIFEDGQVVDAVGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG+MG  +VTV+NL+V
Sbjct: 121 FQGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQMGNAQVTVQNLQV 180

Query: 180 VSVDDKRGLILVKGCVPGA 198
           V VD +R L+L++G VPGA
Sbjct: 181 VRVDAERNLLLIRGAVPGA 199


>gi|152980599|ref|YP_001355101.1| large subunit ribosomal protein L3 [Janthinobacterium sp.
           Marseille]
 gi|212288401|sp|A6T3K4|RL3_JANMA RecName: Full=50S ribosomal protein L3
 gi|151280676|gb|ABR89086.1| large subunit ribosomal protein L3 [Janthinobacterium sp.
           Marseille]
          Length = 224

 Score =  170 bits (430), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/209 (46%), Positives = 126/209 (60%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  IPVTVL + N +V   +T + +GY AVQV  G  +   V+K
Sbjct: 10  GLLGRKVGMMRIFTDDGDSIPVTVLDVSNNRVTQIKTSEVDGYSAVQVAFGSRRASRVNK 69

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
              G F+   V     L EFRV       L VG V + S F VGQ VDV G+TIGKG++G
Sbjct: 70  ASAGHFAKAGVEAGTVLKEFRVAATAASELKVGDVIAASLFEVGQKVDVQGVTIGKGYAG 129

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR+NFG  RATHG S SH   GS G  QDPGRVF  K+M G +G    T +NLE+  +
Sbjct: 130 VIKRYNFGSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTRTTQNLEIARI 189

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D  R L+LVKG VPGA KN  ++V  + K
Sbjct: 190 DADRQLLLVKGAVPGA-KNGQVIVSPAVK 217


>gi|329298533|ref|ZP_08255869.1| 50S ribosomal protein L3 [Plautia stali symbiont]
          Length = 208

 Score =  170 bits (430), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 92/195 (47%), Positives = 123/195 (63%), Gaps = 2/195 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  EG  IPVTV+ ++  +V   + L+ +GY A+QV  G  K   V K
Sbjct: 3   GLVGKKVGMTRIFTEEGVSIPVTVIEVEANRVTQVKGLENDGYQAIQVTTGAKKANRVGK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR + ++    VG   S   F   + VDVTG + GKGF G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRTEGEE--YSVGQSISVEIFADVKKVDVTGTSKGKGFVGT 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++LE+V VD
Sbjct: 121 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLEIVRVD 180

Query: 184 DKRGLILVKGCVPGA 198
            +R L+LVKG VPGA
Sbjct: 181 AERNLLLVKGAVPGA 195


>gi|109896798|ref|YP_660053.1| ribosomal protein L3 [Pseudoalteromonas atlantica T6c]
 gi|123171764|sp|Q15YN9|RL3_PSEA6 RecName: Full=50S ribosomal protein L3
 gi|109699079|gb|ABG38999.1| LSU ribosomal protein L3P [Pseudoalteromonas atlantica T6c]
          Length = 212

 Score =  169 bits (429), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 91/199 (45%), Positives = 128/199 (64%), Gaps = 1/199 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  IPVTV+     +V   RT + +GY A+QV AG+ K   
Sbjct: 1   MAIGLIGRKVGMTRIFTEDGVSIPVTVIEATPNRVTQLRTDETDGYTALQVTAGDKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L+EFR+  ++ + + VGS  +   F   ++VDV G + GKG
Sbjct: 61  VNKAAAGHFAKAGVEAGRGLWEFRLDGNEGEGIEVGSEITVEIFAETKMVDVAGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F GA+KR NF   R +HG S+SHR+ GS G  Q PG+VFK KKMAG+MG  RVTV++L+V
Sbjct: 121 FQGAIKRWNFSHQRNSHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNKRVTVQSLDV 180

Query: 180 VSVDDKRGLILVKGCVPGA 198
           V VD +  L+LV+G VPGA
Sbjct: 181 VRVDAENNLLLVRGNVPGA 199


>gi|311896570|dbj|BAJ28978.1| putative ribosomal protein L3 [Kitasatospora setae KM-6054]
          Length = 215

 Score =  169 bits (429), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 95/209 (45%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           G++  KLGMT V++   R +PVTV+    N    VH      GY AVQ+G GE   + V+
Sbjct: 7   GILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVHTADSPAGYDAVQIGFGEIDPRKVN 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F+   V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G
Sbjct: 67  KPLQGHFAKAGVTPRRHLVELRT-ADASEYTLGQEITAELFEAGVKVDVTGTSKGKGFAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +V
Sbjct: 126 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGHERVTTQNLTVHAV 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D ++GL+L+KG +PG      +LVR + K
Sbjct: 186 DAEKGLLLIKGAIPGP-NGGLVLVRTAAK 213


>gi|72163045|ref|YP_290702.1| 50S ribosomal protein L3 [Thermobifida fusca YX]
 gi|109893568|sp|Q47LJ3|RL3_THEFY RecName: Full=50S ribosomal protein L3
 gi|71916777|gb|AAZ56679.1| LSU ribosomal protein L3P [Thermobifida fusca YX]
          Length = 216

 Score =  169 bits (429), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/208 (46%), Positives = 125/208 (60%), Gaps = 2/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+  KLGMT V++  G+ +PVTVL      V   RT + +GY A+Q+G G    + V+K
Sbjct: 8   GVLGEKLGMTQVFDESGKVVPVTVLKAGPAVVTRVRTPETDGYSAIQLGYGHINPRKVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+  +    N++P++   E R   D     VG   +   F  G+ VDVTG T GKG++G 
Sbjct: 68  PLGDYLRKHNLTPRRHYVEVRTS-DASEYTVGQEITADVFQPGEKVDVTGKTKGKGYAGV 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH FGGL A+HG    HRS GS G    PGRVFK  +MAGRMG  R TV+NL V SVD
Sbjct: 127 MKRHGFGGLGASHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNVRRTVQNLTVHSVD 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            ++GL+LVKG VPG      +LVR + K
Sbjct: 187 AEKGLLLVKGAVPGP-NGGLVLVRTAVK 213


>gi|145225625|ref|YP_001136303.1| 50S ribosomal protein L3 [Mycobacterium gilvum PYR-GCK]
 gi|315445978|ref|YP_004078857.1| 50S ribosomal protein L3P [Mycobacterium sp. Spyr1]
 gi|189042852|sp|A4T1U2|RL3_MYCGI RecName: Full=50S ribosomal protein L3
 gi|145218111|gb|ABP47515.1| LSU ribosomal protein L3P [Mycobacterium gilvum PYR-GCK]
 gi|315264281|gb|ADU01023.1| LSU ribosomal protein L3P [Mycobacterium sp. Spyr1]
          Length = 218

 Score =  169 bits (429), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 90/213 (42%), Positives = 130/213 (61%), Gaps = 4/213 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   + +PVTV+      V   RT +++GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTTERDGYSAVQLAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDD---LLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           +KP+ G F++  V+P++ L E R+  ++D   L  VG   +   F  G  VDVTG + GK
Sbjct: 63  NKPVTGQFAAAGVNPRRHLAELRLADNEDAGALYEVGQELTAEIFADGAYVDVTGTSKGK 122

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF+G MKRH F G  A+HG    HR  GS G    PGRVFK  +M+GRMG +RVT +NL+
Sbjct: 123 GFAGTMKRHGFKGQGASHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGSDRVTTQNLK 182

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V  VD + G++L+KG +PG +    ++VR + K
Sbjct: 183 VHKVDAENGVLLIKGAIPG-RNGGLVVVRSAIK 214


>gi|253991688|ref|YP_003043044.1| 50S ribosomal protein L3 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253783138|emb|CAQ86303.1| 50s ribosomal protein l3 [Photorhabdus asymbiotica]
          Length = 209

 Score =  169 bits (429), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 92/202 (45%), Positives = 130/202 (64%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++N +V   + L+ +GY A+QV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKDLNNDGYRAIQVTTGSKKASRVNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L EFR+ + ++   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRILREFRLSEGEEY-AVGQSISVEIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    A+HG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDASHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  ++ I+
Sbjct: 182 AERNLLLVKGAVPGATGSNLIV 203


>gi|226942778|ref|YP_002797851.1| 50S ribosomal protein L3 [Azotobacter vinelandii DJ]
 gi|226717705|gb|ACO76876.1| 50S ribosomal protein L3 [Azotobacter vinelandii DJ]
          Length = 200

 Score =  169 bits (429), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 89/201 (44%), Positives = 128/201 (63%), Gaps = 3/201 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT ++  EG  +PVTV+ ++  +V   +  + +GY+AVQV  GE +   V+K   G F+ 
Sbjct: 1   MTRIFTEEGVSVPVTVIEIEPNRVTQFKNAESDGYLAVQVTVGERRASRVTKAQAGHFAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
            NV+  + ++EFR+++ +     G   +   F  GQLVDVTG + GKG++G +KR NF G
Sbjct: 61  ANVAAGRGVWEFRLEEGE--YQSGDQITVEIFQAGQLVDVTGQSKGKGYAGTIKRWNFRG 118

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
              THG S+SHR  GS G  Q PGRVFK KKM+G +G  RVTV++LEVV VD +R L+LV
Sbjct: 119 QDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHLGAERVTVQSLEVVRVDSERNLLLV 178

Query: 192 KGCVPGAKKNSWILVRDSFKS 212
           KG +PGA     ++VR + K+
Sbjct: 179 KGAIPGATGGD-VIVRPAAKA 198


>gi|325981805|ref|YP_004294207.1| 50S ribosomal protein L3 [Nitrosomonas sp. AL212]
 gi|325531324|gb|ADZ26045.1| 50S ribosomal protein L3 [Nitrosomonas sp. AL212]
          Length = 215

 Score =  169 bits (429), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 91/214 (42%), Positives = 131/214 (61%), Gaps = 5/214 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GM  ++   G   PVTV+ + + ++   +    NGY A QV  G+ K+  
Sbjct: 1   MSLGLIGRKIGMMRIFTENGDAFPVTVIDVASNRITQIKKTSSNGYCAAQVSFGQKKISR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPV---GSVFSPSYFTVGQLVDVTGMTIG 117
           V+KP  G  +   V     + EFRV KDD +L     G       F VGQ VD++G+TIG
Sbjct: 61  VNKPTAGHCAKAGVIAGSIIREFRV-KDDSILSSFQNGMEIKSDIFKVGQKVDISGITIG 119

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGFSGA+K HNF   RA+HG S +H+  GS G  QDPGR+F  K+MA  MG  + T++NL
Sbjct: 120 KGFSGAIKLHNFSSNRASHGNSKAHKKTGSIGMAQDPGRIFPGKRMAAHMGNVKRTIQNL 179

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           E++ +D +R L+LVKG +PG+ K+ +++VR S K
Sbjct: 180 EILRIDSERNLLLVKGAIPGS-KDGYVVVRSSVK 212


>gi|294142933|ref|YP_003558911.1| 50S ribosomal protein L3 [Shewanella violacea DSS12]
 gi|293329402|dbj|BAJ04133.1| ribosomal protein L3 [Shewanella violacea DSS12]
          Length = 212

 Score =  169 bits (429), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 90/206 (43%), Positives = 128/206 (62%), Gaps = 1/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  +PVTV+ + + +V   +TL+ +GY A+QV  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFCEDGVSVPVTVIEITSNRVTQVKTLETDGYRALQVTTGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++KP  G F+   V   + L+E R+  D+ + + VG+  +   F     VDVTG + GKG
Sbjct: 61  ITKPEAGHFAKAGVEAGRGLWEVRLANDEGEGIEVGAELNVDIFADIAKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF     THG S++HRS+GS G  Q PGRVFK KKM+G MG  RVT +NL V
Sbjct: 121 FQGGIKRWNFHAQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLNV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205
           + VD +R L+LVKG VPGA   + I+
Sbjct: 181 IRVDAERNLLLVKGAVPGAINGNLII 206


>gi|325921481|ref|ZP_08183336.1| LSU ribosomal protein L3P [Xanthomonas gardneri ATCC 19865]
 gi|325548028|gb|EGD19027.1| LSU ribosomal protein L3P [Xanthomonas gardneri ATCC 19865]
          Length = 216

 Score =  169 bits (429), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 95/211 (45%), Positives = 130/211 (61%), Gaps = 4/211 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G V RK GM+ V+  +GR +PVT++     ++   +T++ +GY AVQ+  G  +   V+K
Sbjct: 8   GFVGRKAGMSRVFTEDGRSVPVTLIEATPNRIAQIKTVEADGYSAVQITVGARRAALVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           P  G F+   V   + L+EFRV+ D  L    VG       F VGQ VDV G+T GKGF 
Sbjct: 68  PAAGHFAKAKVEAGRGLWEFRVE-DAQLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQ 126

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR+NF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  + + +NLEVV 
Sbjct: 127 GTIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVK 186

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VD +RGLI ++G VPGA     ++VR + K+
Sbjct: 187 VDVERGLIAIRGAVPGAAGGD-VIVRPASKA 216


>gi|311277725|ref|YP_003939956.1| 50S ribosomal protein L3 [Enterobacter cloacae SCF1]
 gi|308746920|gb|ADO46672.1| 50S ribosomal protein L3 [Enterobacter cloacae SCF1]
          Length = 209

 Score =  169 bits (429), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 91/202 (45%), Positives = 128/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K   V+K
Sbjct: 3   GLIGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFAEVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|303240971|ref|ZP_07327482.1| 50S ribosomal protein L3 [Acetivibrio cellulolyticus CD2]
 gi|302591557|gb|EFL61294.1| 50S ribosomal protein L3 [Acetivibrio cellulolyticus CD2]
          Length = 212

 Score =  169 bits (428), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 92/212 (43%), Positives = 131/212 (61%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++  K+GMT ++N  G  IPVTV+    C V+  +T++ +GY AV+VG  +A  K 
Sbjct: 1   MKKFILGTKIGMTQIFNEAGLAIPVTVIQAGPCTVIQKKTVETDGYGAVKVGFADANEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G FS + V+PKK + EFR    D       +     F  G+ +DVTG++ GKGF
Sbjct: 61  LNKPQKGQFSKLKVAPKKYIREFRADDFDKYEAGQEIKVADMFENGEKIDVTGISKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRH       THG S+ HR  GS G    P RVFK KK+ G MG  RVTV+NL++V
Sbjct: 121 AGVMKRHGHKTGPLTHG-SMYHRRVGSMGANTSPARVFKGKKLPGHMGVERVTVQNLDIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA K   ++++++ KS
Sbjct: 180 RVDAERNLLLVKGAVPGA-KGGLVIIKNTVKS 210


>gi|320540609|ref|ZP_08040259.1| 50S ribosomal subunit protein L3 [Serratia symbiotica str. Tucson]
 gi|320029540|gb|EFW11569.1| 50S ribosomal subunit protein L3 [Serratia symbiotica str. Tucson]
          Length = 209

 Score =  169 bits (428), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 92/202 (45%), Positives = 127/202 (62%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + LD +GY A+QV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKGLDTDGYRAIQVTTGSKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+++  +    G   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLEEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG +G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA   + I+
Sbjct: 182 AERNLLLVKGAVPGATGGNLIV 203


>gi|253581392|ref|ZP_04858618.1| ribosomal protein L3 [Fusobacterium varium ATCC 27725]
 gi|251836756|gb|EES65290.1| ribosomal protein L3 [Fusobacterium varium ATCC 27725]
          Length = 213

 Score =  169 bits (428), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 92/209 (44%), Positives = 135/209 (64%), Gaps = 3/209 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++A+K+GMT ++  +G+ IPVTV+      V+  +T++ +GY A+Q+G  E K KN +
Sbjct: 7   SGILAKKIGMTQIFE-DGKFIPVTVVEAGPNYVLQKKTVENDGYTALQLGFDEKKEKNTT 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    V+P++ + E RV   +    +G           + VD+TG + GKG +G
Sbjct: 66  KPIMGIFKKAGVNPQRFVKELRVDSVEGF-ELGQEIKADVLAEVEYVDITGTSKGKGTAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNFGG RA+HGVS +HR  GS G    PG+V K K+MAG+ G   VTV+NL+VV V
Sbjct: 125 VMKRHNFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQYGNATVTVQNLKVVKV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D +  L+L+KG VPG+ KNS+I+V+ + K
Sbjct: 185 DVENNLLLIKGAVPGS-KNSYIVVKPAVK 212


>gi|22127860|ref|NP_671283.1| 50S ribosomal protein L3 [Yersinia pestis KIM 10]
 gi|45440067|ref|NP_991606.1| 50S ribosomal protein L3 [Yersinia pestis biovar Microtus str.
           91001]
 gi|51597988|ref|YP_072179.1| 50S ribosomal protein L3 [Yersinia pseudotuberculosis IP 32953]
 gi|108809254|ref|YP_653170.1| 50S ribosomal protein L3 [Yersinia pestis Antiqua]
 gi|108814019|ref|YP_649786.1| 50S ribosomal protein L3 [Yersinia pestis Nepal516]
 gi|145597452|ref|YP_001161527.1| 50S ribosomal protein L3 [Yersinia pestis Pestoides F]
 gi|150260743|ref|ZP_01917471.1| 50S ribosomal protein L3 [Yersinia pestis CA88-4125]
 gi|153948634|ref|YP_001402863.1| 50S ribosomal protein L3 [Yersinia pseudotuberculosis IP 31758]
 gi|162419265|ref|YP_001605175.1| 50S ribosomal protein L3 [Yersinia pestis Angola]
 gi|165927910|ref|ZP_02223742.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939998|ref|ZP_02228534.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str. IP275]
 gi|166010464|ref|ZP_02231362.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166213230|ref|ZP_02239265.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167398599|ref|ZP_02304123.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167418747|ref|ZP_02310500.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425639|ref|ZP_02317392.1| ribosomal protein L3 [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|170022544|ref|YP_001719049.1| 50S ribosomal protein L3 [Yersinia pseudotuberculosis YPIII]
 gi|186897184|ref|YP_001874296.1| 50S ribosomal protein L3 [Yersinia pseudotuberculosis PB1/+]
 gi|218927415|ref|YP_002345290.1| 50S ribosomal protein L3 [Yersinia pestis CO92]
 gi|229836309|ref|ZP_04456476.1| 50S ribosomal subunit protein L3 [Yersinia pestis Pestoides A]
 gi|229840067|ref|ZP_04460226.1| 50S ribosomal subunit protein L3 [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229842149|ref|ZP_04462304.1| 50S ribosomal subunit protein L3 [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229904551|ref|ZP_04519662.1| 50S ribosomal subunit protein L3 [Yersinia pestis Nepal516]
 gi|270488233|ref|ZP_06205307.1| 50S ribosomal protein L3 [Yersinia pestis KIM D27]
 gi|294502289|ref|YP_003566351.1| 50S ribosomal protein L3 [Yersinia pestis Z176003]
 gi|42559671|sp|Q8ZJA9|RL3_YERPE RecName: Full=50S ribosomal protein L3
 gi|55977743|sp|P11252|RL3_YERPS RecName: Full=50S ribosomal protein L3
 gi|123073062|sp|Q1CCU4|RL3_YERPN RecName: Full=50S ribosomal protein L3
 gi|123245521|sp|Q1C2U7|RL3_YERPA RecName: Full=50S ribosomal protein L3
 gi|166234609|sp|A4TGZ2|RL3_YERPP RecName: Full=50S ribosomal protein L3
 gi|166990943|sp|A7FNN5|RL3_YERP3 RecName: Full=50S ribosomal protein L3
 gi|226730592|sp|B2K5N0|RL3_YERPB RecName: Full=50S ribosomal protein L3
 gi|226730593|sp|A9R8Z6|RL3_YERPG RecName: Full=50S ribosomal protein L3
 gi|226730594|sp|B1JIW1|RL3_YERPY RecName: Full=50S ribosomal protein L3
 gi|21960995|gb|AAM87534.1|AE014002_7 50S ribosomal subunit protein L3 [Yersinia pestis KIM 10]
 gi|45434922|gb|AAS60483.1| 50S ribosomal protein L3 [Yersinia pestis biovar Microtus str.
           91001]
 gi|51591270|emb|CAH22936.1| 50S ribosomal protein L3 [Yersinia pseudotuberculosis IP 32953]
 gi|108777667|gb|ABG20186.1| LSU ribosomal protein L3P [Yersinia pestis Nepal516]
 gi|108781167|gb|ABG15225.1| LSU ribosomal protein L3P [Yersinia pestis Antiqua]
 gi|115346026|emb|CAL18892.1| 50S ribosomal protein L3 [Yersinia pestis CO92]
 gi|145209148|gb|ABP38555.1| LSU ribosomal protein L3P [Yersinia pestis Pestoides F]
 gi|149290151|gb|EDM40228.1| 50S ribosomal protein L3 [Yersinia pestis CA88-4125]
 gi|152960129|gb|ABS47590.1| ribosomal protein L3 [Yersinia pseudotuberculosis IP 31758]
 gi|162352080|gb|ABX86028.1| ribosomal protein L3 [Yersinia pestis Angola]
 gi|165912038|gb|EDR30679.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str. IP275]
 gi|165920186|gb|EDR37487.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165990554|gb|EDR42855.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166205528|gb|EDR50008.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962741|gb|EDR58762.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167051103|gb|EDR62511.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055329|gb|EDR65123.1| ribosomal protein L3 [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169749078|gb|ACA66596.1| ribosomal protein L3 [Yersinia pseudotuberculosis YPIII]
 gi|186700210|gb|ACC90839.1| ribosomal protein L3 [Yersinia pseudotuberculosis PB1/+]
 gi|229678669|gb|EEO74774.1| 50S ribosomal subunit protein L3 [Yersinia pestis Nepal516]
 gi|229690459|gb|EEO82513.1| 50S ribosomal subunit protein L3 [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229696433|gb|EEO86480.1| 50S ribosomal subunit protein L3 [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229706377|gb|EEO92384.1| 50S ribosomal subunit protein L3 [Yersinia pestis Pestoides A]
 gi|262360369|gb|ACY57090.1| 50S ribosomal protein L3 [Yersinia pestis D106004]
 gi|262364321|gb|ACY60878.1| 50S ribosomal protein L3 [Yersinia pestis D182038]
 gi|270336737|gb|EFA47514.1| 50S ribosomal protein L3 [Yersinia pestis KIM D27]
 gi|294352748|gb|ADE63089.1| 50S ribosomal protein L3 [Yersinia pestis Z176003]
 gi|320013342|gb|ADV96913.1| 50S ribosomal subunit protein L3 [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 209

 Score =  169 bits (428), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 93/202 (46%), Positives = 127/202 (62%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   ++L+ +GY AVQV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYRAVQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+ +  +    G   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLPEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG MG  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHMGDERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA   + I+
Sbjct: 182 AERNLLLVKGAVPGATGGNLIV 203


>gi|325916487|ref|ZP_08178756.1| LSU ribosomal protein L3P [Xanthomonas vesicatoria ATCC 35937]
 gi|325537276|gb|EGD09003.1| LSU ribosomal protein L3P [Xanthomonas vesicatoria ATCC 35937]
          Length = 216

 Score =  169 bits (428), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 95/211 (45%), Positives = 130/211 (61%), Gaps = 4/211 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G V RK GM+ V+  +GR +PVT++     ++   +T++ +GY AVQ+  G  +   V+K
Sbjct: 8   GFVGRKAGMSRVFTEDGRSVPVTLIEATPNRIAQIKTVETDGYSAVQITVGARRAALVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           P  G F+   V   + L+EFRV+ D  L    VG       F VGQ VDV G+T GKGF 
Sbjct: 68  PAAGHFAKAKVEAGRGLWEFRVE-DAQLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQ 126

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR+NF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  + + +NLEVV 
Sbjct: 127 GTIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVK 186

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VD +RGLI ++G VPGA     ++VR + K+
Sbjct: 187 VDVERGLIAIRGAVPGAAGGD-VIVRPASKA 216


>gi|300933010|ref|ZP_07148266.1| 50S ribosomal protein L3 [Corynebacterium resistens DSM 45100]
          Length = 218

 Score =  169 bits (428), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 91/203 (44%), Positives = 125/203 (61%), Gaps = 3/203 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT +++ E R +PVTV+    C V   RT + +GY AVQ+  GE   + V+K
Sbjct: 8   GILGKKLGMTQIFDDENRVVPVTVVEAGPCVVTQVRTKETDGYEAVQIAFGEIDPRKVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ + E RV+ D     VG   +   F   + VDVTG+T G G++GA
Sbjct: 68  PAAGHFKKAGVTPRRHVTEIRVE-DASAYEVGQDVTVEIFNDVKFVDVTGITKGHGYAGA 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G  A+HG   +HR  G  G    PGR+FK K+MAGRMG +RVT++NL+V  VD
Sbjct: 127 MKRHGFAGQGASHGNQAAHRRVGGIGACATPGRIFKGKRMAGRMGSDRVTLQNLKVAKVD 186

Query: 184 DKRGLILVKGCVPGAKKNSWILV 206
            +  L+LVKG VPG   N  I+V
Sbjct: 187 AESNLLLVKGAVPG--NNGGIVV 207


>gi|170769506|ref|ZP_02903959.1| ribosomal protein L3 [Escherichia albertii TW07627]
 gi|170121563|gb|EDS90494.1| ribosomal protein L3 [Escherichia albertii TW07627]
          Length = 209

 Score =  169 bits (428), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 92/202 (45%), Positives = 128/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|312889367|ref|ZP_07748921.1| LSU ribosomal protein L3P [Mucilaginibacter paludis DSM 18603]
 gi|311298244|gb|EFQ75359.1| LSU ribosomal protein L3P [Mucilaginibacter paludis DSM 18603]
          Length = 205

 Score =  169 bits (428), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 91/205 (44%), Positives = 129/205 (62%), Gaps = 4/205 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C V   +++D +GY AVQ+  GE K KN S
Sbjct: 2   SGIIGKKVGMTSIFDEAGKNIPCTVIEAGPCVVTHVKSVDTDGYAAVQLAYGEKKEKNTS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
            P++G F     +PK+KL EF+  +D+  L  G V +   F+ G  VDV G + GKGF G
Sbjct: 62  GPLKGHFQKAGTTPKRKLVEFKTFEDEKSL--GDVITVDLFSAGDFVDVVGTSKGKGFQG 119

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG+   THG     R+ GS G    P RVFK  +MAG MG +RV V+NL+VV 
Sbjct: 120 VVKRHGFGGVGMQTHGQHNRLRAPGSLGASSWPSRVFKGMRMAGHMGNSRVKVQNLQVVK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           V  ++ LI+VKG +PGA K S+++V
Sbjct: 180 VYPEQNLIVVKGSIPGA-KGSFVIV 203


>gi|15617118|ref|NP_240331.1| 50S ribosomal protein L3 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|11134328|sp|P57591|RL3_BUCAI RecName: Full=50S ribosomal protein L3
 gi|25294942|pir||A84991 50S ribosomal protein L3 [imported] - Buchnera sp. (strain APS)
 gi|10039183|dbj|BAB13217.1| 50S ribosomal protein L3 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 209

 Score =  169 bits (428), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 89/202 (44%), Positives = 129/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  EG  IPVTV+ L   ++   + ++ + Y A+QV  G  K   ++K
Sbjct: 3   GLVGKKIGMTRIFTEEGTSIPVTVIELKENRITQVKNINTDLYCAIQVTTGIKKSNRLNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P + L+EFR  K+++   +G   + + F   + VD+TG++ GKGFSG 
Sbjct: 63  PQSGHFLKSGVTPGRGLWEFRTDKNNNF-KIGQSITINIFNNVKKVDITGISKGKGFSGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG++G  RVTV++L +V +D
Sbjct: 122 VKRWNFHTQDATHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGQLGNTRVTVQSLNIVRID 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
           + R L+LVKG VPGA  +  I+
Sbjct: 182 EHRNLLLVKGAVPGATGSDLIV 203


>gi|170077685|ref|YP_001734323.1| 50S ribosomal protein L3 [Synechococcus sp. PCC 7002]
 gi|226730579|sp|B1XJT9|RL3_SYNP2 RecName: Full=50S ribosomal protein L3
 gi|169885354|gb|ACA99067.1| ribosomal protein L3 [Synechococcus sp. PCC 7002]
          Length = 213

 Score =  169 bits (428), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 90/204 (44%), Positives = 129/204 (63%), Gaps = 7/204 (3%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT +++ E G  IPVTV+    C V   +T + +GY +VQ+G G+ K K
Sbjct: 1   MSLGILGTKLGMTQIFDNETGTAIPVTVVQAGPCTVTQIKTSETDGYTSVQIGYGDVKEK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIG 117
           N++KP  G     + +P + L E+R+   DD+    +G   + + F  GQ+VDV+G TIG
Sbjct: 61  NLTKPQLGHLKKADAAPLRHLKEYRL---DDVSGYELGQAITANIFEAGQVVDVSGNTIG 117

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           +GF+G  KRHNF     THG S +HR  GSTG    PGRV+  K+MAGR GG ++TV+ L
Sbjct: 118 RGFAGYQKRHNFKRGNMTHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGRYGGTKITVRKL 176

Query: 178 EVVSVDDKRGLILVKGCVPGAKKN 201
           EVV VD+++ L+L+KG +PG   N
Sbjct: 177 EVVRVDEEKNLLLIKGAIPGKAGN 200


>gi|261342790|ref|ZP_05970648.1| 50S ribosomal protein L3 [Enterobacter cancerogenus ATCC 35316]
 gi|288314968|gb|EFC53906.1| 50S ribosomal protein L3 [Enterobacter cancerogenus ATCC 35316]
          Length = 209

 Score =  169 bits (427), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 93/202 (46%), Positives = 128/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQDISVELFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|254796647|ref|YP_003081483.1| ribosomal protein L3 [Neorickettsia risticii str. Illinois]
 gi|254589884|gb|ACT69246.1| ribosomal protein L3 [Neorickettsia risticii str. Illinois]
          Length = 210

 Score =  169 bits (427), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/210 (47%), Positives = 134/210 (63%), Gaps = 7/210 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ +K+G T VY+     +PVT+L L+  + VV    +++G +  +V  G  K+K  
Sbjct: 3   RVGLLLKKVGCTSVYDDRSSLVPVTLLQLE--ENVVLSAEERDGVVVTRVSFGTRKLK-- 58

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP   +   + +    ++ EFRV       P+GS  +  +F  GQ VD  G +IGKGF+
Sbjct: 59  -KPQLAYLRKLGLEKGGRVVEFRVSPRFVPEPLGS-LTVEHFRPGQYVDAVGTSIGKGFA 116

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF GLRA+HGVSISHRS GSTG  QDPG+VFK KKMAG MG  RVT++NL V  
Sbjct: 117 GVMKRHNFAGLRASHGVSISHRSGGSTGQCQDPGKVFKGKKMAGHMGNARVTMQNLLVQL 176

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           VD +  LI V+G VPG  KNS++L+RD+ K
Sbjct: 177 VDVENCLIGVRGSVPGC-KNSYVLLRDALK 205


>gi|325068030|ref|ZP_08126703.1| 50S ribosomal protein L3 [Actinomyces oris K20]
          Length = 222

 Score =  169 bits (427), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 89/209 (42%), Positives = 128/209 (61%), Gaps = 2/209 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++  KLGMT +++  G   PVTV+ +D   V   RT++ +GY AVQ+  G+   + V+KP
Sbjct: 16  LLGTKLGMTQIWDENGVLRPVTVVRVDTNVVTQVRTIETDGYEAVQLAFGDIDARKVTKP 75

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + G F+   V P++ + E R     +  P G   +   F VGQLVDVTG + GKGF+G M
Sbjct: 76  LAGHFAKAGVEPRRHVAEIRTSLASEFTP-GQELAADTFEVGQLVDVTGTSKGKGFAGVM 134

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH F G+ A+HG   +HR  GS G    PGR+FK  +MAGRMG  R TV+NL++  +D 
Sbjct: 135 KRHGFAGVGASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGHARRTVQNLKIRGIDV 194

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +G++LV G +PG  K S ++VR + K A
Sbjct: 195 DKGVLLVNGAIPG-PKGSVVVVRTAVKGA 222


>gi|152972227|ref|YP_001337373.1| 50S ribosomal protein L3 [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|206576036|ref|YP_002236281.1| ribosomal protein L3 [Klebsiella pneumoniae 342]
 gi|238896816|ref|YP_002921561.1| 50S ribosomal protein L3 [Klebsiella pneumoniae NTUH-K2044]
 gi|262045177|ref|ZP_06018204.1| 50S ribosomal protein L3 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288933266|ref|YP_003437325.1| 50S ribosomal protein L3 [Klebsiella variicola At-22]
 gi|290512069|ref|ZP_06551437.1| 50S ribosomal protein L3 [Klebsiella sp. 1_1_55]
 gi|330002294|ref|ZP_08304288.1| 50S ribosomal protein L3 [Klebsiella sp. MS 92-3]
 gi|166233150|sp|A6TEX2|RL3_KLEP7 RecName: Full=50S ribosomal protein L3
 gi|226730525|sp|B5XN94|RL3_KLEP3 RecName: Full=50S ribosomal protein L3
 gi|150957076|gb|ABR79106.1| 50S ribosomal protein L3 [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|206565094|gb|ACI06870.1| ribosomal protein L3 [Klebsiella pneumoniae 342]
 gi|238549143|dbj|BAH65494.1| 50S ribosomal protein L3 [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259037497|gb|EEW38741.1| 50S ribosomal protein L3 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288887995|gb|ADC56313.1| 50S ribosomal protein L3 [Klebsiella variicola At-22]
 gi|289775859|gb|EFD83859.1| 50S ribosomal protein L3 [Klebsiella sp. 1_1_55]
 gi|328537367|gb|EGF63617.1| 50S ribosomal protein L3 [Klebsiella sp. MS 92-3]
          Length = 209

 Score =  169 bits (427), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 93/202 (46%), Positives = 127/202 (62%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+  D +   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLA-DGEEFTVGQNISVELFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|148655337|ref|YP_001275542.1| 50S ribosomal protein L3 [Roseiflexus sp. RS-1]
 gi|166234588|sp|A5USI9|RL3_ROSS1 RecName: Full=50S ribosomal protein L3
 gi|148567447|gb|ABQ89592.1| LSU ribosomal protein L3P [Roseiflexus sp. RS-1]
          Length = 210

 Score =  169 bits (427), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 130/213 (61%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V++  G+ IPVT++ +  C V   RT +++GY AVQ+G  E K K+
Sbjct: 1   MIEGLLGRKIGMTQVFDATGQVIPVTIIEVGPCVVTQIRTKERDGYEAVQIGYQEVKAKS 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P +G          + L EFR     D   VG V +   FT GQ VDV G + G+GF
Sbjct: 61  LTRPEQGHLRGAG-KLLRHLREFRADNIADH-KVGDVLTVEMFTPGQRVDVIGTSKGRGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH FGG   THG S   R+ GS G   DPG V KN +MAGRMG  RVTV+NL VV
Sbjct: 119 QGVVKRHGFGGGPRTHGQSDRLRAPGSIGAGTDPGHVLKNTRMAGRMGNQRVTVQNLTVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  +R L+LV+G +PGA KN  ++VR + K +
Sbjct: 179 DVVPERNLLLVRGSIPGA-KNGLVMVRRAIKGS 210


>gi|323966282|gb|EGB61717.1| 50S ribosomal protein L3 [Escherichia coli M863]
          Length = 209

 Score =  169 bits (427), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 93/202 (46%), Positives = 127/202 (62%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K   V K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVIK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|294638052|ref|ZP_06716312.1| 50S ribosomal protein L3 [Edwardsiella tarda ATCC 23685]
 gi|291088844|gb|EFE21405.1| 50S ribosomal protein L3 [Edwardsiella tarda ATCC 23685]
          Length = 209

 Score =  169 bits (427), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 92/202 (45%), Positives = 127/202 (62%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + LD +GY A+QV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLDNDGYRAIQVTTGSKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L EFR+ + ++   +G   S   F   + VDVTG++ GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRVLREFRLSEGEEFT-IGQNISVEIFADVKKVDVTGISKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG +G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA     I+
Sbjct: 182 AERNLLLVKGAVPGATGGDLIV 203


>gi|15837754|ref|NP_298442.1| 50S ribosomal protein L3 [Xylella fastidiosa 9a5c]
 gi|9106116|gb|AAF83962.1|AE003950_12 50S ribosomal protein L3 [Xylella fastidiosa 9a5c]
          Length = 210

 Score =  169 bits (427), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/209 (47%), Positives = 129/209 (61%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G V RK GM+ V+  +G  IPVT++     +VV  +T D +GY AVQV  G  +   V+K
Sbjct: 2   GFVGRKAGMSRVFLEDGCSIPVTLIEATANRVVQIKTSDVDGYDAVQVTVGSRRSVLVNK 61

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P  G F+   V   + L+EFRV+K       VGS    S F VGQ VD+ G+T GKGF G
Sbjct: 62  PESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGFQG 121

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHNF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  R +V+NLEVV +
Sbjct: 122 TIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEVVKI 181

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D +R LI V+G +PGA     +L+R + K
Sbjct: 182 DVERCLIAVRGAIPGASGGD-VLIRSASK 209


>gi|114778824|ref|ZP_01453631.1| 50S ribosomal protein L3 [Mariprofundus ferrooxydans PV-1]
 gi|114550955|gb|EAU53519.1| 50S ribosomal protein L3 [Mariprofundus ferrooxydans PV-1]
          Length = 199

 Score =  169 bits (427), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 93/202 (46%), Positives = 126/202 (62%), Gaps = 3/202 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT ++  +G  I VTVL+++ C+VV  R+ DK+GY AVQVG G AK +N ++P++G ++ 
Sbjct: 1   MTQIFTADGSAIAVTVLNIEPCKVVARRSADKDGYDAVQVGFGAAK-RNTTRPVQGHYAR 59

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
                   L EFR+  D +   +G   + + F  GQ +DV+G + G GF+G MKR+NFGG
Sbjct: 60  QGQEVAGGLKEFRIAADAEF-ELGQELNATLFEAGQKIDVSGTSKGHGFAGVMKRYNFGG 118

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
            RATHG    HR  GSTG  Q PGRVF  KKM G  G  R T +NLEVV VD +   ILV
Sbjct: 119 GRATHGAEKVHRQMGSTGQCQWPGRVFPGKKMPGHFGNVRSTTQNLEVVRVDAEANRILV 178

Query: 192 KGCVPGAKKNSWILVRDSFKSA 213
           KG VPG+ +N  + +R + K A
Sbjct: 179 KGAVPGS-RNGLVELRPAVKGA 199


>gi|329945684|ref|ZP_08293414.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 170 str.
           F0386]
 gi|328528492|gb|EGF55466.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 170 str.
           F0386]
          Length = 222

 Score =  169 bits (427), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 90/209 (43%), Positives = 128/209 (61%), Gaps = 2/209 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++  KLGMT +++  G   PVTV+ +D   V   RT++ +GY AVQ+  G+   + V+KP
Sbjct: 16  LLGTKLGMTQIWDENGVLRPVTVVRVDTNVVTQVRTIETDGYEAVQLAFGDINARKVTKP 75

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + G F+   V P++ + E R     +  P G   +   F VGQLVDVTG + GKGF+G M
Sbjct: 76  LAGHFAKAGVEPRRHVAEVRTSLASEFTP-GQELAADTFEVGQLVDVTGTSKGKGFAGVM 134

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH F G+ A+HG   +HR  GS G    PGR+FK  +MAGRMG  R TV+NL++  VD 
Sbjct: 135 KRHGFAGVGASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGHARRTVQNLKIRGVDV 194

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +G++LV G +PG  K S ++VR + K A
Sbjct: 195 DKGVLLVNGAIPG-PKGSVVVVRTAVKGA 222


>gi|283788044|ref|YP_003367909.1| 50S ribosomal subunit protein L3 [Citrobacter rodentium ICC168]
 gi|282951498|emb|CBG91197.1| 50S ribosomal subunit protein L3 [Citrobacter rodentium ICC168]
          Length = 209

 Score =  169 bits (427), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 92/202 (45%), Positives = 127/202 (62%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L   GY A+QV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANEGYRAIQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|332172249|gb|AEE21503.1| 50S ribosomal protein L3 [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 212

 Score =  169 bits (427), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 91/199 (45%), Positives = 127/199 (63%), Gaps = 1/199 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  IPVTV+     +V   RT + +GY A+QV AG+ K   
Sbjct: 1   MAIGLIGRKVGMTRIFTEDGVSIPVTVIEATPNRVTQLRTDETDGYTALQVTAGDKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQ-KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L+EFR+   + + + VGS  +   F   ++VDV G + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLWEFRLDGTEGEGIEVGSEITVEIFAETKMVDVAGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F GA+KR NF   R +HG S+SHR+ GS G  Q PG+VFK KKMAG+MG  RVTV++L+V
Sbjct: 121 FQGAIKRWNFSHQRNSHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNKRVTVQSLDV 180

Query: 180 VSVDDKRGLILVKGCVPGA 198
           V VD +  L+LV+G VPGA
Sbjct: 181 VRVDAENNLLLVRGNVPGA 199


>gi|21241737|ref|NP_641319.1| 50S ribosomal protein L3 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|78046555|ref|YP_362730.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|294627843|ref|ZP_06706422.1| 50S ribosomal protein L3 [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|294663996|ref|ZP_06729410.1| 50S ribosomal protein L3 [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|325925387|ref|ZP_08186789.1| LSU ribosomal protein L3P [Xanthomonas perforans 91-118]
 gi|42559654|sp|Q8PNS4|RL3_XANAC RecName: Full=50S ribosomal protein L3
 gi|109893571|sp|Q3BWY3|RL3_XANC5 RecName: Full=50S ribosomal protein L3
 gi|21107108|gb|AAM35855.1| 50S ribosomal protein L3 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|78034985|emb|CAJ22630.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|292597757|gb|EFF41915.1| 50S ribosomal protein L3 [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292606225|gb|EFF49462.1| 50S ribosomal protein L3 [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|325544265|gb|EGD15646.1| LSU ribosomal protein L3P [Xanthomonas perforans 91-118]
          Length = 216

 Score =  169 bits (427), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/211 (45%), Positives = 130/211 (61%), Gaps = 4/211 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G V RK GM+ V+  +GR +PVT++     ++   +T++ +GY AVQV  G  +   V+K
Sbjct: 8   GFVGRKAGMSRVFTEDGRSVPVTLIEATPNRIAQIKTVEVDGYSAVQVTVGARRAALVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           P  G F+   V   + L+EFRV+ D  L    VG       F VGQ VDV G+T GKGF 
Sbjct: 68  PAAGHFAKAKVEAGRGLWEFRVE-DAQLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQ 126

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR+NF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  + + +NLEVV 
Sbjct: 127 GTIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVK 186

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VD +RGLI ++G VPGA     ++VR + K+
Sbjct: 187 VDVERGLIAIRGAVPGAAGGD-VIVRPASKA 216


>gi|22297625|ref|NP_680872.1| 50S ribosomal protein L3 [Thermosynechococcus elongatus BP-1]
 gi|42559634|sp|Q8DMN1|RL3_THEEB RecName: Full=50S ribosomal protein L3
 gi|22293802|dbj|BAC07634.1| 50S ribosomal protein L3 [Thermosynechococcus elongatus BP-1]
          Length = 212

 Score =  169 bits (427), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 87/197 (44%), Positives = 121/197 (61%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT +++  GR +P+TV+    C +   +T   +GY A+QV  GE + KN
Sbjct: 1   MTVGILGTKLGMTQIFDEAGRSVPITVVQAGPCPITQIKTPQTDGYTAIQVAYGEVREKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +S+P RG  +     P + L EFR++ D     +G   +   F+ GQLVDV G +IG+GF
Sbjct: 61  LSRPERGHLNKSQTPPMRHLREFRLE-DVSAYQLGQAITVDIFSPGQLVDVRGTSIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRHNF      HG S +HR  GSTG    PGRVF  K+MAGRMG   VT++ L+V+
Sbjct: 120 AGYQKRHNFKRGPMAHG-SKNHRLPGSTGAGTTPGRVFPGKRMAGRMGNTAVTIRKLQVM 178

Query: 181 SVDDKRGLILVKGCVPG 197
            VD +R LIL+KG +PG
Sbjct: 179 RVDPERNLILIKGALPG 195


>gi|292669860|ref|ZP_06603286.1| 50S ribosomal protein L3 [Selenomonas noxia ATCC 43541]
 gi|292648657|gb|EFF66629.1| 50S ribosomal protein L3 [Selenomonas noxia ATCC 43541]
          Length = 220

 Score =  169 bits (427), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/215 (46%), Positives = 131/215 (60%), Gaps = 5/215 (2%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RKLGMT ++  EGR +PVTV+   N  V+ ++T + +GY AVQ+G GE K KNV+KP
Sbjct: 8   ILGRKLGMTQIFTEEGRVVPVTVVESGNNFVLQNKTDETDGYNAVQIGFGEVKEKNVNKP 67

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           ++G F    V   + + E R+    +   VG       F  G LVDV G + GKGF+G +
Sbjct: 68  LKGHFEKAGVKAVRFIREMRLSAPSE-YNVGDTIGVDIFAAGDLVDVVGTSKGKGFAGGI 126

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCR-QDP-GRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           KRHNF      HG S SHR  GSTG     P GRV K KK+ GRMGG RVTV+ L VV V
Sbjct: 127 KRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLTVVRV 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           D  R LIL+KG +PG KK  +++++D+ K A   K
Sbjct: 186 DADRNLILIKGAIPGPKK-GFVVIKDTVKPAKAAK 219


>gi|227328949|ref|ZP_03832973.1| 50S ribosomal protein L3 [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
 gi|253690183|ref|YP_003019373.1| ribosomal protein L3 [Pectobacterium carotovorum subsp. carotovorum
           PC1]
 gi|259709730|sp|C6DG74|RL3_PECCP RecName: Full=50S ribosomal protein L3
 gi|251756761|gb|ACT14837.1| ribosomal protein L3 [Pectobacterium carotovorum subsp. carotovorum
           PC1]
          Length = 209

 Score =  169 bits (427), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 93/202 (46%), Positives = 127/202 (62%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L EFR+ + ++   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRTLREFRLSEGEEFT-VGQSISVEIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|21672770|ref|NP_660837.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|25009109|sp|Q8K950|RL3_BUCAP RecName: Full=50S ribosomal protein L3
 gi|21623417|gb|AAM68048.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 209

 Score =  169 bits (427), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 88/194 (45%), Positives = 121/194 (62%), Gaps = 1/194 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +KLGM+ ++  EG  IP+TV+ +   ++   R +  + Y A+QV  G  K+  + K
Sbjct: 3   GLVGKKLGMSRIFTKEGSSIPITVIQIQENRITQIRNIKTDKYYAIQVTTGLKKLNRLKK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V P + L+EFR+  +++   +G     + F   + VDVTG++ GKGFSG 
Sbjct: 63  PESGHFLKSGVIPGRGLWEFRIN-NNEKFQIGQSIKINIFNDIKKVDVTGISKGKGFSGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G NRVTV+NL +V +D
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGHLGNNRVTVQNLNIVKID 181

Query: 184 DKRGLILVKGCVPG 197
             R L+LVKG VPG
Sbjct: 182 QNRNLLLVKGAVPG 195


>gi|269796255|ref|YP_003315710.1| 50S ribosomal protein L3P [Sanguibacter keddieii DSM 10542]
 gi|269098440|gb|ACZ22876.1| LSU ribosomal protein L3P [Sanguibacter keddieii DSM 10542]
          Length = 219

 Score =  168 bits (426), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 92/211 (43%), Positives = 127/211 (60%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           + V+  KLGMT V++  GR +PVTV+ +    V   RT + +GY AVQ+  G+   + VS
Sbjct: 11  TAVLGTKLGMTQVWDEAGRLVPVTVVQVGTNVVTQVRTAELDGYAAVQLAYGQIDPRKVS 70

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +P++G F    V+P++ + E R   D     +G   +   F  G +VDV G T GKGF+G
Sbjct: 71  QPLKGHFEKAGVTPRRHVTEIRT-SDAGEFTLGQELTAEAFASGSVVDVIGTTKGKGFAG 129

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    P RVFK  +MAGRMG +R T +NL V +V
Sbjct: 130 VMKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGVRMAGRMGVDRQTTQNLTVHAV 189

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+LVKG VPG  K   +LVR + K A
Sbjct: 190 DAEKGLLLVKGAVPG-PKGGVVLVRSAAKGA 219


>gi|21230364|ref|NP_636281.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66769642|ref|YP_244404.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|166710831|ref|ZP_02242038.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzicola BLS256]
 gi|188992854|ref|YP_001904864.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris
           str. B100]
 gi|42559653|sp|Q8PC49|RL3_XANCP RecName: Full=50S ribosomal protein L3
 gi|81304403|sp|Q4URD9|RL3_XANC8 RecName: Full=50S ribosomal protein L3
 gi|226730589|sp|B0RU82|RL3_XANCB RecName: Full=50S ribosomal protein L3
 gi|21111920|gb|AAM40205.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66574974|gb|AAY50384.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|167734614|emb|CAP52824.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris]
          Length = 216

 Score =  168 bits (426), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 95/211 (45%), Positives = 130/211 (61%), Gaps = 4/211 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G V RK GM+ V+  +GR +PVT++     ++   +T++ +GY AVQ+  G  +   V+K
Sbjct: 8   GFVGRKAGMSRVFTEDGRSVPVTLIEATPNRIAQIKTVEVDGYSAVQITVGARRAALVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           P  G F+   V   + L+EFRV+ D  L    VG       F VGQ VDV G+T GKGF 
Sbjct: 68  PAAGHFAKAKVEAGRGLWEFRVE-DAQLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQ 126

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR+NF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  + + +NLEVV 
Sbjct: 127 GTIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVK 186

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VD +RGLI ++G VPGA     ++VR + K+
Sbjct: 187 VDVERGLIAIRGAVPGAAGGD-VIVRPASKA 216


>gi|308814220|ref|XP_003084415.1| putative ribosomal protein L3 (ISS) [Ostreococcus tauri]
 gi|116056300|emb|CAL56683.1| putative ribosomal protein L3 (ISS) [Ostreococcus tauri]
          Length = 312

 Score =  168 bits (426), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 98/211 (46%), Positives = 126/211 (59%), Gaps = 3/211 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVKN 60
           R+G +  K GMT  ++  G R  +TV+ LD  +VV     D  NGY AVQ+G G  K K 
Sbjct: 61  RTGAIGIKCGMTADWDARGCRHALTVVWLDGVEVVRRTGRDGANGYDAVQIGYGARKAKG 120

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F       K+ L EFRV +   L P G+V + ++F  GQ VDV G T GKGF
Sbjct: 121 VTKAELGHFVRHGSGIKRGLKEFRVSRCGTLTP-GTVITAAHFAAGQYVDVGGTTKGKGF 179

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G MKR  F G  ATHG +  HR+HGS G  QDPGRVFK KKMAGRMGG R TV++  V 
Sbjct: 180 QGPMKRWGFAGQPATHGNTKKHRAHGSIGQCQDPGRVFKGKKMAGRMGGRRRTVQSAYVW 239

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L+ +KG +PG    + + +RD+ +
Sbjct: 240 KVDTERNLLYIKGQIPGGAGTA-VTIRDALR 269


>gi|42559703|sp|Q9PE76|RL3_XYLFA RecName: Full=50S ribosomal protein L3
          Length = 215

 Score =  168 bits (426), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/209 (47%), Positives = 129/209 (61%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G V RK GM+ V+  +G  IPVT++     +VV  +T D +GY AVQV  G  +   V+K
Sbjct: 7   GFVGRKAGMSRVFLEDGCSIPVTLIEATANRVVQIKTSDVDGYDAVQVTVGSRRSVLVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P  G F+   V   + L+EFRV+K       VGS    S F VGQ VD+ G+T GKGF G
Sbjct: 67  PESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGFQG 126

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHNF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  R +V+NLEVV +
Sbjct: 127 TIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEVVKI 186

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D +R LI V+G +PGA     +L+R + K
Sbjct: 187 DVERCLIAVRGAIPGASGGD-VLIRSASK 214


>gi|71902234|ref|ZP_00684241.1| Ribosomal protein L3 [Xylella fastidiosa Ann-1]
 gi|71728008|gb|EAO30222.1| Ribosomal protein L3 [Xylella fastidiosa Ann-1]
          Length = 215

 Score =  168 bits (426), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/209 (47%), Positives = 129/209 (61%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G V RK GM+ V+  +G  IPVT++     +VV  +T D +GY AVQV  G  +   V+K
Sbjct: 7   GFVGRKAGMSRVFLEDGCSIPVTLIEATANRVVQIKTSDVDGYDAVQVTVGSRRSVLVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P  G F+   V   + L+EFRV+K       VGS    S F VGQ VD+ G+T GKGF G
Sbjct: 67  PESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGFQG 126

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHNF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  R +V+NLEV+ +
Sbjct: 127 TIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEVIKI 186

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D +R LI V+G VPGA     +L+R + K
Sbjct: 187 DVERCLIAVRGAVPGASGGD-VLIRSASK 214


>gi|86739295|ref|YP_479695.1| 50S ribosomal protein L3 [Frankia sp. CcI3]
 gi|109893429|sp|Q2JFH6|RL3_FRASC RecName: Full=50S ribosomal protein L3
 gi|86566157|gb|ABD09966.1| LSU ribosomal protein L3P [Frankia sp. CcI3]
          Length = 235

 Score =  168 bits (426), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 93/208 (44%), Positives = 124/208 (59%), Gaps = 2/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      V   +T D +GY AVQ+G GE   + ++K
Sbjct: 8   GLLGTKLGMTQVWDANNRVVPVTVIKAGPNVVTQVKTPDSDGYSAVQLGYGEVDPRKINK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P RG F++  V+P++ L E R     +  P G   +   F+ G +VDVTG + GKGF+G 
Sbjct: 68  PARGHFATSGVTPRRHLVELRTADAGNYRP-GQELTGEVFSAGTVVDVTGTSKGKGFAGV 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GL A HGV   HRS GS G    PGRVFK  +MAGRMG  R T   L + +VD
Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGHVRTTTSGLTIHAVD 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +RG +LV+G VPG      +LVR + K
Sbjct: 187 TERGYLLVRGAVPG-PDGGLVLVRSAAK 213


>gi|296105028|ref|YP_003615174.1| 50S ribosomal protein L3 [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295059487|gb|ADF64225.1| 50S ribosomal protein L3 [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295096961|emb|CBK86051.1| LSU ribosomal protein L3P [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 209

 Score =  168 bits (426), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 92/202 (45%), Positives = 128/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQDISVELFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|34541541|ref|NP_906020.1| 50S ribosomal protein L3 [Porphyromonas gingivalis W83]
 gi|188995732|ref|YP_001929984.1| 50S ribosomal protein L3 [Porphyromonas gingivalis ATCC 33277]
 gi|42559592|sp|Q7MTL3|RL3_PORGI RecName: Full=50S ribosomal protein L3
 gi|226730547|sp|B2RLZ2|RL3_PORG3 RecName: Full=50S ribosomal protein L3
 gi|34397858|gb|AAQ66919.1| ribosomal protein L3 [Porphyromonas gingivalis W83]
 gi|188595412|dbj|BAG34387.1| 50S ribosomal protein L3 [Porphyromonas gingivalis ATCC 33277]
          Length = 205

 Score =  168 bits (426), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 91/205 (44%), Positives = 133/205 (64%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EG+ +P TV+ +  C V   +TL+K+GY A+Q+G  +AK K+ +K
Sbjct: 3   GLLGKKIGMTSVFSAEGKNLPCTVIEVGPCVVTQVKTLEKDGYSALQLGFVDAKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F   NV+PK+ L EF+  + +  L  G V +  +F+    VDV G + GKGF G 
Sbjct: 63  PLAGHFKKANVAPKRHLAEFKNFEGEHKL--GDVLNVEFFSDADFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ +ATHG     R+ G+ G    P +VFK  +MAG+MG  RVTV+NLEV+ V
Sbjct: 121 VKRHGFGGVGQATHGQHNRLRAPGAVGACSYPAKVFKGTRMAGQMGNERVTVQNLEVIKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  L+LVKG VPGA K S +L+ 
Sbjct: 181 MPEHNLLLVKGSVPGA-KGSILLIE 204


>gi|261823232|ref|YP_003261338.1| 50S ribosomal protein L3 [Pectobacterium wasabiae WPP163]
 gi|261607245|gb|ACX89731.1| 50S ribosomal protein L3 [Pectobacterium wasabiae WPP163]
          Length = 209

 Score =  168 bits (426), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 92/202 (45%), Positives = 127/202 (62%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L EFR+ + ++   +G   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRTLREFRLSEGEEFT-IGQSISVEIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|328884426|emb|CCA57665.1| LSU ribosomal protein L3p [Streptomyces venezuelae ATCC 10712]
          Length = 218

 Score =  168 bits (426), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 93/208 (44%), Positives = 126/208 (60%), Gaps = 2/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+K
Sbjct: 11  GILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDIDGYESVQIAFGEIDPRKVNK 70

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G 
Sbjct: 71  PLKGHFAKADVTPRRHLVELRTA-DASEYTLGQEITAEVFEAGVKVDVTGKSKGKGFAGV 129

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF G +A+HG    HR  GS G    PGRVFK  +MAGRMG  RVT +NL V +VD
Sbjct: 130 MKRHNFRGGKASHGAHRVHRKPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTVHAVD 189

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            ++GL+L+KG VPG      +LVR + K
Sbjct: 190 AEKGLLLIKGAVPGP-NGGLVLVRTAAK 216


>gi|308047991|ref|YP_003911557.1| 50S ribosomal protein L3P [Ferrimonas balearica DSM 9799]
 gi|307630181|gb|ADN74483.1| LSU ribosomal protein L3P [Ferrimonas balearica DSM 9799]
          Length = 212

 Score =  168 bits (426), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 130/213 (61%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTV+ ++  +V   +TLD +GY A+QV AG  K   
Sbjct: 1   MAIGLVGRKVGMTRIFTPEGVSIPVTVIEVEPNRVTQVKTLDTDGYSALQVTAGAKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV-FSPSYFTVGQLVDVTGMTIGKG 119
           V+KP  G F+   V   +  +EFR+ + +              FT    VDVTG + GKG
Sbjct: 61  VTKPEAGHFAKAGVEAGRGTWEFRLGEGEGEGIELGAELKVDIFTDVAKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F GA+KR NF     THG S+SHR+ GS G  Q PG+VFK KKMAG MG  RVT +NL+V
Sbjct: 121 FQGAIKRWNFRSQDMTHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGHMGAERVTTQNLDV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LVKG +PGA   + ++V+ + K+
Sbjct: 181 VRVDVERNLLLVKGAIPGANGGN-VIVKPAVKA 212


>gi|238754175|ref|ZP_04615533.1| 50S ribosomal protein L3 [Yersinia ruckeri ATCC 29473]
 gi|238707671|gb|EEQ00031.1| 50S ribosomal protein L3 [Yersinia ruckeri ATCC 29473]
          Length = 209

 Score =  168 bits (426), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 92/202 (45%), Positives = 127/202 (62%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   ++L+ +GY AVQV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYRAVQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+ +  +    G   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLAEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG +G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA   + I+
Sbjct: 182 AERNLLLVKGAVPGATGGNLIV 203


>gi|224827017|ref|ZP_03700114.1| ribosomal protein L3 [Lutiella nitroferrum 2002]
 gi|224600683|gb|EEG06869.1| ribosomal protein L3 [Lutiella nitroferrum 2002]
          Length = 214

 Score =  168 bits (426), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 97/213 (45%), Positives = 128/213 (60%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTVL +   +V   +T + +GY A+QV  G  K   
Sbjct: 1   MSLGLVGRKVGMTRIFAEDGASIPVTVLDMAANRVTQIKTAEVDGYEAIQVTYGSCKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF +  +       G   +   F VGQLVDVTG + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLGEFVLNAEQLSQFKPGDAITVEIFQVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNF   RA+HG S SH + GS G  QDPGRV   K+MAG+ G  + TV+ LE+
Sbjct: 121 FSGVIKRHNFSSNRASHGNSRSHNTPGSIGQAQDPGRVLPGKRMAGQYGNVQSTVQRLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V +D +R LILVKG VPGA  N  ++VR S K+
Sbjct: 181 VRIDTERQLILVKGAVPGA-TNGDVVVRPSVKA 212


>gi|37528543|ref|NP_931888.1| 50S ribosomal protein L3 [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|42559593|sp|Q7MYF1|RL3_PHOLL RecName: Full=50S ribosomal protein L3
 gi|36787981|emb|CAE17098.1| 50S ribosomal protein L3 [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 209

 Score =  168 bits (425), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 91/202 (45%), Positives = 129/202 (63%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ +++ +V   + LD +GY A+QV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIEDNRVTQVKELDNDGYRAIQVTTGSKKASRVNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L EFR+ + ++   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRILREFRLSEGEEY-AVGQSISVEIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    A+HG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDASHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPG+   + I+
Sbjct: 182 AERNLLLVKGAVPGSTGGNLIV 203


>gi|16762843|ref|NP_458460.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16766729|ref|NP_462344.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|29144330|ref|NP_807672.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56415359|ref|YP_152434.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62181944|ref|YP_218361.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|168260850|ref|ZP_02682823.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|168468001|ref|ZP_02701838.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|194445166|ref|YP_002042690.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194447875|ref|YP_002047463.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194472945|ref|ZP_03078929.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194737134|ref|YP_002116382.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197248367|ref|YP_002148359.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197264223|ref|ZP_03164297.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197364289|ref|YP_002143926.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|198243139|ref|YP_002217402.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200387538|ref|ZP_03214150.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205354932|ref|YP_002228733.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207858682|ref|YP_002245333.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|213052953|ref|ZP_03345831.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213583772|ref|ZP_03365598.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213613028|ref|ZP_03370854.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|213646335|ref|ZP_03376388.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|213865564|ref|ZP_03387683.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|224585235|ref|YP_002639034.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238913845|ref|ZP_04657682.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289806054|ref|ZP_06536683.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
 gi|289824750|ref|ZP_06544215.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|42559567|sp|P60445|RL3_SALTI RecName: Full=50S ribosomal protein L3
 gi|42559568|sp|P60446|RL3_SALTY RecName: Full=50S ribosomal protein L3
 gi|81309571|sp|Q57J32|RL3_SALCH RecName: Full=50S ribosomal protein L3
 gi|81821488|sp|Q5PIV2|RL3_SALPA RecName: Full=50S ribosomal protein L3
 gi|226730559|sp|B5F8F2|RL3_SALA4 RecName: Full=50S ribosomal protein L3
 gi|226730560|sp|B5FJL4|RL3_SALDC RecName: Full=50S ribosomal protein L3
 gi|226730561|sp|B5R291|RL3_SALEP RecName: Full=50S ribosomal protein L3
 gi|226730562|sp|B5RH15|RL3_SALG2 RecName: Full=50S ribosomal protein L3
 gi|226730563|sp|B4TKL5|RL3_SALHS RecName: Full=50S ribosomal protein L3
 gi|226730564|sp|B4SUU0|RL3_SALNS RecName: Full=50S ribosomal protein L3
 gi|226730565|sp|B5BGY6|RL3_SALPK RecName: Full=50S ribosomal protein L3
 gi|226730566|sp|B4TXE2|RL3_SALSV RecName: Full=50S ribosomal protein L3
 gi|254803688|sp|C0Q0B6|RL3_SALPC RecName: Full=50S ribosomal protein L3
 gi|25294952|pir||AI1005 50S ribosomal chain protein L3 [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16421997|gb|AAL22303.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|16505149|emb|CAD08173.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29139968|gb|AAO71532.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56129616|gb|AAV79122.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62129577|gb|AAX67280.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|194403829|gb|ACF64051.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194406179|gb|ACF66398.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194459309|gb|EDX48148.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194712636|gb|ACF91857.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|195628908|gb|EDX48318.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|197095766|emb|CAR61336.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|197212070|gb|ACH49467.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197242478|gb|EDY25098.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197937655|gb|ACH74988.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|199604636|gb|EDZ03181.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205274713|emb|CAR39769.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205350127|gb|EDZ36758.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|206710485|emb|CAR34843.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224469763|gb|ACN47593.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261248596|emb|CBG26434.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267995649|gb|ACY90534.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301159983|emb|CBW19502.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312914463|dbj|BAJ38437.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320087885|emb|CBY97648.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|321226487|gb|EFX51537.1| LSU ribosomal protein L3p (L3e) [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322615019|gb|EFY11943.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322617306|gb|EFY14207.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322625528|gb|EFY22353.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322626370|gb|EFY23179.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322632118|gb|EFY28871.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322635003|gb|EFY31726.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322643296|gb|EFY39863.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322646620|gb|EFY43127.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322649966|gb|EFY46385.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322652683|gb|EFY49023.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322659560|gb|EFY55804.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322665498|gb|EFY61685.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322670392|gb|EFY66531.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322670465|gb|EFY66599.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322675041|gb|EFY71124.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322681578|gb|EFY77607.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322685922|gb|EFY81911.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|322716431|gb|EFZ08002.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323131798|gb|ADX19228.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323194030|gb|EFZ79230.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323196452|gb|EFZ81603.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323202309|gb|EFZ87354.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207342|gb|EFZ92292.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323211222|gb|EFZ96067.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323216069|gb|EGA00800.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323223440|gb|EGA07768.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323226830|gb|EGA11020.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323231808|gb|EGA15918.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323233239|gb|EGA17334.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323237306|gb|EGA21371.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323245541|gb|EGA29540.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323249047|gb|EGA32969.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323250670|gb|EGA34551.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323256899|gb|EGA40613.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323263048|gb|EGA46595.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323266048|gb|EGA49543.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323272805|gb|EGA56208.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
 gi|326625183|gb|EGE31528.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|326630081|gb|EGE36424.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 209

 Score =  168 bits (425), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 93/195 (47%), Positives = 125/195 (64%), Gaps = 1/195 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLAEGEEYT-VGQSISVELFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGA 198
            +R L+LVKG VPGA
Sbjct: 182 AERNLLLVKGGVPGA 196


>gi|326773963|ref|ZP_08233245.1| 50S ribosomal protein L3 [Actinomyces viscosus C505]
 gi|326636102|gb|EGE37006.1| 50S ribosomal protein L3 [Actinomyces viscosus C505]
          Length = 222

 Score =  168 bits (425), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 89/209 (42%), Positives = 127/209 (60%), Gaps = 2/209 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++  KLGMT +++  G   PVTV+ +D   V   RT++ +GY AVQ+  G+     V+KP
Sbjct: 16  LLGTKLGMTQIWDENGVLRPVTVVRVDTNVVTQVRTIETDGYEAVQLAFGDIDASKVTKP 75

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + G F+   V P++ + E R     +  P G   +   F VGQLVDVTG + GKGF+G M
Sbjct: 76  LAGHFAKAGVEPRRHVAEIRTSLASEFTP-GQELAADTFEVGQLVDVTGTSKGKGFAGVM 134

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH F G+ A+HG   +HR  GS G    PGR+FK  +MAGRMG  R TV+NL++  +D 
Sbjct: 135 KRHGFAGVGASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGHARRTVQNLKIRGIDV 194

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +G++LV G +PG  K S ++VR + K A
Sbjct: 195 DKGVLLVNGAIPG-PKGSVVVVRTAVKGA 222


>gi|167748430|ref|ZP_02420557.1| hypothetical protein ANACAC_03174 [Anaerostipes caccae DSM 14662]
 gi|317472037|ref|ZP_07931369.1| 50S ribosomal protein L3 [Anaerostipes sp. 3_2_56FAA]
 gi|167652422|gb|EDR96551.1| hypothetical protein ANACAC_03174 [Anaerostipes caccae DSM 14662]
 gi|316900441|gb|EFV22423.1| 50S ribosomal protein L3 [Anaerostipes sp. 3_2_56FAA]
          Length = 209

 Score =  168 bits (425), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 127/212 (59%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++  K+GMT ++N +G   PVTVL    C V   +T + +GY AVQVG  + K K+
Sbjct: 1   MKKAILTTKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTEENDGYEAVQVGFADKKEKS 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G F    V+PKK + EF+ +   +   VG       F  G  +D T  + GKG+
Sbjct: 61  VNKPEKGHFDKAGVAPKKFVREFKFENASEYT-VGQEIKADIFEAGDKIDATATSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH       THG S  HR  GS G   DP +VFK KKM G+MG  RVT++NLEVV
Sbjct: 120 AGGIKRHGLSTGPKTHG-SKYHRHAGSNGMASDPSKVFKGKKMPGQMGSERVTIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  +ILVKG VPG KK S +++++S K+
Sbjct: 179 KVDAENNIILVKGAVPGPKK-SLVMLKESVKA 209


>gi|296423844|ref|XP_002841462.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637702|emb|CAZ85653.1| unnamed protein product [Tuber melanosporum]
          Length = 306

 Score =  168 bits (425), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 89/199 (44%), Positives = 124/199 (62%), Gaps = 1/199 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GV+A K GMT +Y   GRRI  TVL L+  QV   +T  K+GY AVQVG+G     NV
Sbjct: 76  RTGVLAVKKGMTAIYKPSGRRIACTVLQLERVQVTAVKTRQKHGYWAVQVGSGWRNSNNV 135

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           ++PM G F++  V+PK+ L EFRV+ +  L+  G+  S  +F  GQ VDV     G+GF+
Sbjct: 136 TRPMLGHFATAGVAPKEHLREFRVKDETGLMEPGTALSADFFVEGQYVDVRANCKGRGFA 195

Query: 122 GAMKRHNFGGLRATHGVSISHRS-HGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           G MKRH F G  A+HG S+SHR+   +   +    RV   K+M GRMGG+RVT  + +++
Sbjct: 196 GGMKRHGFSGQPASHGNSLSHRAMGSAGQSQGGGSRVLPGKRMPGRMGGHRVTRPHAQIM 255

Query: 181 SVDDKRGLILVKGCVPGAK 199
            ++ + G IL+ G VPG K
Sbjct: 256 EINKELGTILLFGPVPGPK 274


>gi|269955435|ref|YP_003325224.1| 50S ribosomal protein L3 [Xylanimonas cellulosilytica DSM 15894]
 gi|269304116|gb|ACZ29666.1| ribosomal protein L3 [Xylanimonas cellulosilytica DSM 15894]
          Length = 217

 Score =  168 bits (425), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 89/211 (42%), Positives = 129/211 (61%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           + V+ +KLGMT +++  GR +PVTV+ +D   V   RT + +GY AVQ+  G+   + V+
Sbjct: 9   TAVLGKKLGMTQLWDEAGRLVPVTVVAVDTNVVTQVRTTETDGYSAVQLAVGQIDPRKVT 68

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +P++G F    V+P++ + E R   D     VG   + + F  G +VDV+G T GKG +G
Sbjct: 69  QPLKGHFEKAGVTPRRHVAEIRT-ADASTYTVGQEITAAAFEAGAVVDVSGTTKGKGTAG 127

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    P RVFK  +MAGRMG  R T +NL V +V
Sbjct: 128 VMKRHGFAGVGASHGSHRNHRKPGSIGGASTPSRVFKGLRMAGRMGNARQTTQNLTVHAV 187

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+LVKG VPG  K   ++V+ + K A
Sbjct: 188 DAEKGLLLVKGAVPG-PKGGVVVVKTAAKGA 217


>gi|313895368|ref|ZP_07828925.1| 50S ribosomal protein L3 [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|312976263|gb|EFR41721.1| 50S ribosomal protein L3 [Selenomonas sp. oral taxon 137 str.
           F0430]
          Length = 217

 Score =  168 bits (425), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 99/219 (45%), Positives = 132/219 (60%), Gaps = 5/219 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ RKLGMT ++  EGR +PVTV+   N  V+ ++T + +GY AVQ+G G+ K KN
Sbjct: 1   MAKAILGRKLGMTQIFTEEGRVVPVTVVESGNNLVLRNKTNETDGYNAVQIGFGDVKEKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F    V   + + E R+    +   VG       F  G LVDV G + GKGF
Sbjct: 61  VTKPLKGQFEKAGVKAVRFIREMRLSAPSE-YNVGDTIGVDIFAEGDLVDVVGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCR-QDP-GRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KRHNF      HG S SHR  GSTG     P GRV K KK+ GRMGG RVTV+ L 
Sbjct: 120 AGGIKRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLT 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           VV VD  R LIL+KG +PG KK  +++++D+ K A   K
Sbjct: 179 VVRVDTDRNLILIKGAIPGPKK-GFVVIKDTVKPAKAAK 216


>gi|116671521|ref|YP_832454.1| 50S ribosomal protein L3 [Arthrobacter sp. FB24]
 gi|171855202|sp|A0JZ84|RL3_ARTS2 RecName: Full=50S ribosomal protein L3
 gi|116611630|gb|ABK04354.1| LSU ribosomal protein L3P [Arthrobacter sp. FB24]
          Length = 216

 Score =  168 bits (425), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 92/210 (43%), Positives = 125/210 (59%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   + IPVTV+  D+  +   R  D +GY+AVQ+G G+   + V+K
Sbjct: 9   GLLGTKLGMTQVWDENNKLIPVTVVQADSNVITQLRNADVDGYVAVQIGYGQIDPRKVTK 68

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+P++ + E R   D     +G   S   F  GQ +DV G T GKGF+G 
Sbjct: 69  PLAGHFEKAGVTPRRHVVELRT-ADAAEYELGQELSVEVFEAGQKIDVVGTTKGKGFAGV 127

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G+ A+HG   +HR  GS G    P RVFK  KMAGRMG  R T  NL V +VD
Sbjct: 128 MKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGMKMAGRMGAVRHTTLNLTVHAVD 187

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++ L+L+KG VPGA +   +LVR + K A
Sbjct: 188 VEKSLLLIKGAVPGA-RGQVVLVRTAVKGA 216


>gi|24371829|ref|NP_715871.1| 50S ribosomal protein L3 [Shewanella oneidensis MR-1]
 gi|113968544|ref|YP_732337.1| 50S ribosomal protein L3 [Shewanella sp. MR-4]
 gi|114045707|ref|YP_736257.1| 50S ribosomal protein L3 [Shewanella sp. MR-7]
 gi|117918657|ref|YP_867849.1| 50S ribosomal protein L3 [Shewanella sp. ANA-3]
 gi|42559642|sp|Q8EK68|RL3_SHEON RecName: Full=50S ribosomal protein L3
 gi|122945060|sp|Q0I0A5|RL3_SHESR RecName: Full=50S ribosomal protein L3
 gi|123325489|sp|Q0HNT7|RL3_SHESM RecName: Full=50S ribosomal protein L3
 gi|166234595|sp|A0KRM4|RL3_SHESA RecName: Full=50S ribosomal protein L3
 gi|24345642|gb|AAN53316.1|AE015473_3 ribosomal protein L3 [Shewanella oneidensis MR-1]
 gi|113883228|gb|ABI37280.1| LSU ribosomal protein L3P [Shewanella sp. MR-4]
 gi|113887149|gb|ABI41200.1| LSU ribosomal protein L3P [Shewanella sp. MR-7]
 gi|117610989|gb|ABK46443.1| LSU ribosomal protein L3P [Shewanella sp. ANA-3]
          Length = 212

 Score =  168 bits (425), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 92/206 (44%), Positives = 126/206 (61%), Gaps = 1/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  IPVTV+ +   +V   +TL+ +GY A+QV  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFTEDGVSIPVTVIEVAGNRVTQVKTLETDGYRALQVTTGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++KP  G F+   V   + L+E R+   + + + VG+  +   F     VDVTG + GKG
Sbjct: 61  ITKPEAGHFAKSGVEAGRGLWELRLADGEGEGIEVGAELNVGIFADVAKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF     THG S+SHRS+GS G  Q PGRVFK KKM+G MG  RVT +NL+V
Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205
           V VD +R L+LVKG VPGA     I+
Sbjct: 181 VRVDVERNLLLVKGAVPGATNGDLII 206


>gi|157372776|ref|YP_001480765.1| 50S ribosomal protein L3 [Serratia proteamaculans 568]
 gi|166990940|sp|A8GKJ7|RL3_SERP5 RecName: Full=50S ribosomal protein L3
 gi|157324540|gb|ABV43637.1| ribosomal protein L3 [Serratia proteamaculans 568]
          Length = 209

 Score =  168 bits (425), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 93/202 (46%), Positives = 125/202 (61%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +KLGMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+K
Sbjct: 3   GLVGKKLGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTTGSKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR  + ++    G   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRTAEGEEFT-AGQNISVEIFAEVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG +G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA   + I+
Sbjct: 182 AERNLLLVKGAVPGATGGNLIV 203


>gi|123444098|ref|YP_001008068.1| 50S ribosomal protein L3 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|238752687|ref|ZP_04614158.1| 50S ribosomal protein L3 [Yersinia rohdei ATCC 43380]
 gi|238783169|ref|ZP_04627195.1| 50S ribosomal protein L3 [Yersinia bercovieri ATCC 43970]
 gi|238788910|ref|ZP_04632700.1| 50S ribosomal protein L3 [Yersinia frederiksenii ATCC 33641]
 gi|238797238|ref|ZP_04640739.1| 50S ribosomal protein L3 [Yersinia mollaretii ATCC 43969]
 gi|332163259|ref|YP_004299836.1| 50S ribosomal protein L3 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|166234608|sp|A1JS47|RL3_YERE8 RecName: Full=50S ribosomal protein L3
 gi|122091059|emb|CAL13942.1| 50S ribosomal protein L3 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|238709114|gb|EEQ01361.1| 50S ribosomal protein L3 [Yersinia rohdei ATCC 43380]
 gi|238715965|gb|EEQ07951.1| 50S ribosomal protein L3 [Yersinia bercovieri ATCC 43970]
 gi|238718875|gb|EEQ10690.1| 50S ribosomal protein L3 [Yersinia mollaretii ATCC 43969]
 gi|238722937|gb|EEQ14587.1| 50S ribosomal protein L3 [Yersinia frederiksenii ATCC 33641]
 gi|318607744|emb|CBY29242.1| LSU ribosomal protein L3p (L3e) [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325667489|gb|ADZ44133.1| 50S ribosomal protein L3 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330861855|emb|CBX72026.1| 50S ribosomal protein L3 [Yersinia enterocolitica W22703]
          Length = 209

 Score =  168 bits (425), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 92/202 (45%), Positives = 127/202 (62%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   ++L+ +GY AVQV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYRAVQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+ +  +    G   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLPEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG +G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA   + I+
Sbjct: 182 AERNLLLVKGAVPGATGGNLIV 203


>gi|269468075|gb|EEZ79789.1| ribosomal protein L3 [uncultured SUP05 cluster bacterium]
          Length = 278

 Score =  168 bits (425), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 97/206 (47%), Positives = 130/206 (63%), Gaps = 9/206 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQV--GA----- 53
           M  G+V +KLGMT + + +G    V+V+ ++  +VV  RT + +GY AVQV  GA     
Sbjct: 1   MAIGLVGQKLGMTRIMSEDGSATAVSVIKIEANRVVQTRTTEVDGYSAVQVTTGAKVNKK 60

Query: 54  GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113
           GEAKV+ V   ++G ++  +      L+EFR   D + +   S F  S F  G  VDVTG
Sbjct: 61  GEAKVRRVPSAIKGHYAKASQDIGLGLWEFRA--DANEIGDASSFDLSIFGAGHYVDVTG 118

Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
            + GKGF G +KRHNF    ATHG SISHR+ GSTG  Q+PGRVFK KKMAG MG  +VT
Sbjct: 119 QSKGKGFQGGVKRHNFQMQDATHGNSISHRAIGSTGQCQEPGRVFKGKKMAGHMGDEQVT 178

Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAK 199
            + LE++ VD +R L+LVKG +PG+K
Sbjct: 179 EECLEIIRVDSERNLLLVKGAIPGSK 204


>gi|188535279|ref|YP_001909076.1| 50S ribosomal protein L3 [Erwinia tasmaniensis Et1/99]
 gi|226725174|sp|B2VK65|RL3_ERWT9 RecName: Full=50S ribosomal protein L3
 gi|188030321|emb|CAO98210.1| 50S ribosomal protein L3 [Erwinia tasmaniensis Et1/99]
          Length = 209

 Score =  167 bits (424), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 91/202 (45%), Positives = 127/202 (62%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L+ +GY A+QV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKGLENDGYTAIQVTTGAKKASRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR  +  +   VG   +   F   + VDVTG + GKGF+G 
Sbjct: 63  PAAGHFAKAGVEAGRGLWEFRTAEGAEFT-VGQSINVDIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|297625782|ref|YP_003687545.1| 50S ribosomal protein L3 [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
 gi|296921547|emb|CBL56101.1| 50S ribosomal protein L3 [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 224

 Score =  167 bits (424), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 94/208 (45%), Positives = 124/208 (59%), Gaps = 2/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT +++   R +PVTV+    C V   RT D +GY AVQ+G G  + K+V+K
Sbjct: 14  GLLGTKLGMTQLWDENNRLVPVTVIQAGPCVVTQVRTPDTDGYSAVQLGYGAIRAKSVTK 73

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V+P+K L E R   D     +G    P  F    +VDVTG+T GKG +G 
Sbjct: 74  PAAGQFARAKVTPRKYLAEIRTS-DASEYTLGQELGPDTFRTDDVVDVTGVTKGKGTAGV 132

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR  F GL A+HGV   HRS G  G    PG VFK  +MAGRMG  R TV+NL V  VD
Sbjct: 133 VKRWGFKGLGASHGVHRKHRSPGGIGACATPGHVFKGLRMAGRMGNARKTVQNLAVAGVD 192

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
             +GLILV+G VPG  K + +++R + K
Sbjct: 193 ADKGLILVRGAVPG-NKGALVVLRTAAK 219


>gi|259909999|ref|YP_002650355.1| 50S ribosomal protein L3 [Erwinia pyrifoliae Ep1/96]
 gi|292489849|ref|YP_003532739.1| 50S ribosomal protein L3 [Erwinia amylovora CFBP1430]
 gi|292900891|ref|YP_003540260.1| 50S ribosomal protein L3 [Erwinia amylovora ATCC 49946]
 gi|224965621|emb|CAX57153.1| 50S ribosomal protein L3 [Erwinia pyrifoliae Ep1/96]
 gi|283480096|emb|CAY76012.1| 50S ribosomal protein L3 [Erwinia pyrifoliae DSM 12163]
 gi|291200739|emb|CBJ47872.1| 50S ribosomal subunit protein L3 [Erwinia amylovora ATCC 49946]
 gi|291555286|emb|CBA23589.1| 50S ribosomal protein L3 [Erwinia amylovora CFBP1430]
 gi|310765598|gb|ADP10548.1| 50S ribosomal protein L3 [Erwinia sp. Ejp617]
 gi|312174031|emb|CBX82284.1| 50S ribosomal protein L3 [Erwinia amylovora ATCC BAA-2158]
          Length = 209

 Score =  167 bits (424), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 91/202 (45%), Positives = 127/202 (62%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L+ +GY A+QV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKGLENDGYTAIQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR  +  +   VG   +   F   + VDVTG + GKGF+G 
Sbjct: 63  PAAGHFAKAGVEAGRGLWEFRTAEGAEFT-VGQSINVDIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|238928155|ref|ZP_04659915.1| ribosomal protein L3 [Selenomonas flueggei ATCC 43531]
 gi|238884115|gb|EEQ47753.1| ribosomal protein L3 [Selenomonas flueggei ATCC 43531]
          Length = 220

 Score =  167 bits (424), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 98/215 (45%), Positives = 131/215 (60%), Gaps = 5/215 (2%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RKLGMT ++  EGR +PVTV+   N  V+  +T++ +GY AVQ+G G+ K KNV+KP
Sbjct: 8   ILGRKLGMTQIFTEEGRVVPVTVVESGNNFVLRSKTVESDGYNAVQIGFGDIKEKNVTKP 67

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           ++G F    V   + + E R+    +   VG       F  G LVDV G + GKGF+G +
Sbjct: 68  LKGQFEKAGVKAVRFIREMRLSAPSE-YNVGDTIGVDIFAAGDLVDVVGTSKGKGFAGGI 126

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCR-QDP-GRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           KRHNF      HG S SHR  GSTG     P GRV K KK+ GRMGG RVTV+ L VV V
Sbjct: 127 KRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLTVVRV 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           D  R LIL+KG +PG KK  +++++D+ K A   K
Sbjct: 186 DADRNLILIKGAIPGPKKG-FVVIKDTVKPAKAAK 219


>gi|260886876|ref|ZP_05898139.1| 50S ribosomal protein L3 [Selenomonas sputigena ATCC 35185]
 gi|330839326|ref|YP_004413906.1| 50S ribosomal protein L3 [Selenomonas sputigena ATCC 35185]
 gi|260863475|gb|EEX77975.1| 50S ribosomal protein L3 [Selenomonas sputigena ATCC 35185]
 gi|329747090|gb|AEC00447.1| 50S ribosomal protein L3 [Selenomonas sputigena ATCC 35185]
          Length = 219

 Score =  167 bits (424), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 97/213 (45%), Positives = 131/213 (61%), Gaps = 5/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ RKLGMT ++  EG  +PVTV+   N  V++++T++ +GY AVQ+G GE K K 
Sbjct: 1   MSKAILGRKLGMTQIFTEEGTVVPVTVVESGNNVVIMNKTVENDGYNAVQIGFGEVKEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F+   V+P + + E R+  D     VG       F  G LVDVTG + GKGF
Sbjct: 61  VTKPLKGHFAKAGVAPVRFIREMRLT-DASEYNVGDTIGVDIFAAGDLVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KRHNF      HG S SHR  GSTG       GRV K KK+ G+MG  RVTV+ L 
Sbjct: 120 AGTIKRHNFARGPMGHG-SKSHREPGSTGAMISGHGGRVLKGKKLPGQMGHARVTVQRLS 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           VV VD +R LIL+KG +PG KK   ++VR + K
Sbjct: 179 VVRVDAERNLILIKGAIPGPKK-GLVVVRATVK 210


>gi|163783267|ref|ZP_02178260.1| elongation factor Tu [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881375|gb|EDP74886.1| elongation factor Tu [Hydrogenivirga sp. 128-5-R1-1]
          Length = 236

 Score =  167 bits (424), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 96/200 (48%), Positives = 124/200 (62%), Gaps = 1/200 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GV+ RKLGMT V+  +G  +PVTV+ +    VV  ++ +K+GY AVQVGA EAK K+
Sbjct: 1   MGIGVIGRKLGMTRVFTSDGTAVPVTVIQVPANYVVQVKSPEKDGYSAVQVGAVEAKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+ G FS  NV   + L EFRV    D      +     F  G LVDV G + G+GF
Sbjct: 61  LTKPLMGHFSKKNVKLLRYLKEFRVDNTQDYQEGQELKLEEVFKPGDLVDVVGTSKGRGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR +FGG   +HG    HR+ GS G R DPGRV+K KKMAG  G  ++ V++L VV
Sbjct: 121 AGTMKRWDFGGFPKSHGHRY-HRAVGSIGNRTDPGRVWKGKKMAGHWGAEKIRVQSLLVV 179

Query: 181 SVDDKRGLILVKGCVPGAKK 200
            V  + GLILVKG VPG  K
Sbjct: 180 DVIPEEGLILVKGSVPGPNK 199


>gi|95931442|ref|ZP_01314148.1| ribosomal protein L3 [Desulfuromonas acetoxidans DSM 684]
 gi|95132510|gb|EAT14203.1| ribosomal protein L3 [Desulfuromonas acetoxidans DSM 684]
          Length = 210

 Score =  167 bits (424), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 96/215 (44%), Positives = 131/215 (60%), Gaps = 9/215 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M +G++ +KLGMT ++   G RIPVTV+    C VV  + +D +GY AVQ+G GE K   
Sbjct: 2   MVNGILGKKLGMTQIFTESGMRIPVTVIEAGPCTVVQKKVVDTDGYDAVQLGFGEQKAHR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGS-VFSPSYFTVGQLVDVTGMTIG 117
           ++KP  G F        K +F    + D ++  L VG+ +     F+ G +VDV G + G
Sbjct: 62  INKPKMGHFKKAG----KGVFASLREMDGEIAELEVGAEIVCGDVFSAGDIVDVMGTSKG 117

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF G MKR NF G R+THG S  HR+ G+ GC   P RVFK KKMAG+MG  RVT++NL
Sbjct: 118 KGFQGVMKRWNFSGGRSTHG-SKFHRAPGAIGCSAWPSRVFKGKKMAGQMGNERVTIQNL 176

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           E+V V   + LILVKG +PG  KN  + +R + K+
Sbjct: 177 EIVDVRADQNLILVKGAIPGP-KNGLVTIRKAIKA 210


>gi|238061121|ref|ZP_04605830.1| 50S ribosomal protein L3 rplC [Micromonospora sp. ATCC 39149]
 gi|57547707|gb|AAW52546.1| RplC [Micromonospora sp. ATCC 39149]
 gi|237882932|gb|EEP71760.1| 50S ribosomal protein L3 rplC [Micromonospora sp. ATCC 39149]
          Length = 223

 Score =  167 bits (423), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 90/204 (44%), Positives = 126/204 (61%), Gaps = 3/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   + +PVTV+    C V   R+ +K+GY AVQ+  G    + V K
Sbjct: 7   GILGAKLGMTQVWD-NNKVVPVTVVQAGPCVVSQVRSAEKDGYSAVQLAYGTIDPRKVKK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G ++  +V+P++ + E R     D   +G   +   F  G  +DVTG T GKG++G 
Sbjct: 66  PVSGHYAKADVAPRRHIVELRTTDAADY-SLGQEVTVEQFPAGVTIDVTGKTKGKGYAGP 124

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GLRA+HGV   HRS GS G    PGRVFK  +MAGRMGG R TV+NL V ++D
Sbjct: 125 MKRHGFHGLRASHGVERKHRSPGSIGACATPGRVFKGTRMAGRMGGVRYTVQNLTVQAID 184

Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207
            +  L+LV+G +PG  K + +LVR
Sbjct: 185 TENNLLLVRGAIPGP-KGALVLVR 207


>gi|269837066|ref|YP_003319294.1| 50S ribosomal protein L3 [Sphaerobacter thermophilus DSM 20745]
 gi|269786329|gb|ACZ38472.1| ribosomal protein L3 [Sphaerobacter thermophilus DSM 20745]
          Length = 216

 Score =  167 bits (423), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 98/213 (46%), Positives = 130/213 (61%), Gaps = 9/213 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT ++N  G+ IPVTVL +  C V   +T +++GY AVQ+G G  K   
Sbjct: 1   MIHGLLGKKLGMTQIFNEAGQAIPVTVLEVGPCVVTQVKTRERDGYEAVQLGFGHKK--R 58

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           +++P RG   +    P+      R  K D++    VG V   S F  G+ VDVTG + G+
Sbjct: 59  LNQPERGHLRASGAQPRY----LREVKADNIEEYSVGQVIDCSVFKEGERVDVTGTSKGR 114

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF+G MKRH FGG  ATHG S   R+ GS G    PGRVFK  +MAG MG  RVTV+NLE
Sbjct: 115 GFAGVMKRHGFGGGPATHGQSDRKRAPGSIGASATPGRVFKGLRMAGHMGNQRVTVQNLE 174

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           VV VD +R ++LV+G VPGA     +LVR + K
Sbjct: 175 VVRVDPERNVVLVRGSVPGA-NGQLVLVRRAVK 206


>gi|325964166|ref|YP_004242072.1| 50S ribosomal protein L3P [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470253|gb|ADX73938.1| LSU ribosomal protein L3P [Arthrobacter phenanthrenivorans Sphe3]
          Length = 216

 Score =  167 bits (423), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 91/210 (43%), Positives = 125/210 (59%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   + IPVTV+  D+  +   R  + +GY+AVQ+G G+   + V+K
Sbjct: 9   GLLGTKLGMTQVWDENNKLIPVTVVQADSNVITQLRNAEADGYVAVQIGYGQIDPRKVTK 68

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+P++ + E R   D     +G   S   F  GQ +DV G T GKGF+G 
Sbjct: 69  PLAGHFEKAGVTPRRHVVELRT-ADAAEYELGQELSVEVFEAGQKIDVIGTTKGKGFAGV 127

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G+ A+HG   +HR  GS G    P RVFK  KMAGRMG  R T  NL V +VD
Sbjct: 128 MKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGMKMAGRMGAVRHTTLNLTVHAVD 187

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++ L+L+KG VPGA +   +LVR + K A
Sbjct: 188 VEKSLLLIKGAVPGA-RGQVVLVRTAVKGA 216


>gi|77359116|ref|YP_338691.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|109893540|sp|Q3IF25|RL3_PSEHT RecName: Full=50S ribosomal protein L3
 gi|76874027|emb|CAI85248.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 211

 Score =  167 bits (423), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 91/198 (45%), Positives = 120/198 (60%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+     ++   ++   +GY A+QV AG  K   
Sbjct: 1   MALGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRIAQIKSEATDGYNALQVTAGTKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+   V   + L+EFR+   +    VG+  +   F     VDVTG + GKGF
Sbjct: 61  VNKASAGHFAKAGVEAGRGLWEFRLNGGEGDFEVGAELTVELFNEINKVDVTGTSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG MG  RVT +NLE+V
Sbjct: 121 QGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGHMGAERVTTQNLELV 180

Query: 181 SVDDKRGLILVKGCVPGA 198
            VD +R L+LVKG VPGA
Sbjct: 181 RVDAERNLLLVKGAVPGA 198


>gi|148263140|ref|YP_001229846.1| 50S ribosomal protein L3 [Geobacter uraniireducens Rf4]
 gi|189042846|sp|A5GAW5|RL3_GEOUR RecName: Full=50S ribosomal protein L3
 gi|146396640|gb|ABQ25273.1| LSU ribosomal protein L3P [Geobacter uraniireducens Rf4]
          Length = 211

 Score =  167 bits (423), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 94/212 (44%), Positives = 127/212 (59%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT ++  +GRRIPVTV+    C V+  +T +K+GY A+QVG    +   
Sbjct: 1   MNKGLIGKKLGMTQIFAEDGRRIPVTVVEAGPCVVIQKKTKEKDGYSAIQVGFNSQEAAK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +  + G   +        L E RV  + D   VG V S   F  G LVDVTG +IGKGF
Sbjct: 61  ANSAVVGHCKTAGSGVFSFLRELRVD-NADQYSVGDVLSAEIFAPGDLVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G MKR  F G RA+HG S  HR+ GS GC   P RVFKNKKM G++G  +VTV+ L++V
Sbjct: 120 QGVMKRWGFKGGRASHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQLGNEKVTVQRLKIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD    LIL+ G +PG+  N  +L++DS K+
Sbjct: 179 RVDAADNLILLNGAIPGS-TNGLVLIKDSVKA 209


>gi|317065030|ref|ZP_07929515.1| LSU ribosomal protein L3P [Fusobacterium ulcerans ATCC 49185]
 gi|313690706|gb|EFS27541.1| LSU ribosomal protein L3P [Fusobacterium ulcerans ATCC 49185]
          Length = 213

 Score =  167 bits (423), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 91/209 (43%), Positives = 134/209 (64%), Gaps = 3/209 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++A+K+GMT ++  +G+ IPVTV+      V+  +T++ +GY A+Q+G  E K KN +
Sbjct: 7   SGILAKKIGMTQIFE-DGKFIPVTVVEAGPNYVLQKKTVENDGYTALQLGFDEKKEKNTT 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    V+P++ + E RV   +    +G           + VD+TG + GKG +G
Sbjct: 66  KPIMGIFKKAGVNPQRFVKELRVDSVEGF-ELGQEIKADVLAEVEYVDITGTSKGKGTAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF G RA+HGVS +HR  GS G    PG+V + KKMAG+ G   VTV+NL+VV V
Sbjct: 125 VMKRHNFAGNRASHGVSRNHRLGGSIGMSSWPGKVLRGKKMAGQYGNATVTVQNLKVVKV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D +  L+L+KG VPG+ KNS+I+V+ + K
Sbjct: 185 DVENNLLLIKGAVPGS-KNSYIVVKPAVK 212


>gi|260579267|ref|ZP_05847151.1| 50S ribosomal protein L3 [Corynebacterium jeikeium ATCC 43734]
 gi|258602619|gb|EEW15912.1| 50S ribosomal protein L3 [Corynebacterium jeikeium ATCC 43734]
          Length = 218

 Score =  167 bits (423), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 91/213 (42%), Positives = 125/213 (58%), Gaps = 2/213 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT +++ E R +PVTV+    C V   RT + +GY AVQ+  GE   + V+K
Sbjct: 8   GILGKKLGMTQIFDEENRVVPVTVVEAGPCVVTQVRTKETDGYEAVQIAFGEIDPRKVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ + E RV  D     VG   +   F   + VDVTG T GKG++G 
Sbjct: 68  PAAGHFKKAGVTPRRHVAEIRVA-DASSYEVGQDVTVDIFNDVKFVDVTGTTKGKGYAGG 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G  A HG   +HR  GS G    PGRVFK K+MAGRMG +RVT +NL+V  VD
Sbjct: 127 MKRHGFAGQGAAHGNQAAHRRVGSIGQAATPGRVFKGKRMAGRMGNDRVTQQNLKVAKVD 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            +  L+L+KG VPG      ++V+ + K   + 
Sbjct: 187 AESNLLLIKGAVPGV-NGGLVVVKTAVKGGAHA 218


>gi|238758764|ref|ZP_04619938.1| 50S ribosomal protein L3 [Yersinia aldovae ATCC 35236]
 gi|238703061|gb|EEP95604.1| 50S ribosomal protein L3 [Yersinia aldovae ATCC 35236]
          Length = 209

 Score =  167 bits (423), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 93/202 (46%), Positives = 125/202 (61%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTTGSKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+ +  +    G   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLAEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG MG  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHMGDERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA   + I+
Sbjct: 182 AERNLLLVKGAVPGATGGNLIV 203


>gi|297571935|ref|YP_003697709.1| 50S ribosomal protein L3 [Arcanobacterium haemolyticum DSM 20595]
 gi|296932282|gb|ADH93090.1| 50S ribosomal protein L3 [Arcanobacterium haemolyticum DSM 20595]
          Length = 222

 Score =  167 bits (423), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 87/205 (42%), Positives = 123/205 (60%), Gaps = 2/205 (0%)

Query: 9   KLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGF 68
           KLGMT V++   + +PVTV+ +    V   RT + +GY AVQ+ +GE K KNV+KP++G 
Sbjct: 20  KLGMTQVWDENAKLVPVTVVRVGKNVVTQVRTPEIDGYSAVQIASGELKAKNVTKPLKGH 79

Query: 69  FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
           F    V P++ + E R    +D   +G       F  GQ +DV G + GKGF+G MKRH 
Sbjct: 80  FEKAGVEPRRHVAEIRTVDAEDYT-LGQELGVETFEAGQTIDVIGKSKGKGFAGVMKRHG 138

Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188
           F G+ A+HG   +HR  GS G    P RVF+  +MAGRMG  RVTV+NL + ++D +  L
Sbjct: 139 FAGVSASHGAHRNHRKPGSIGACSTPSRVFRGMRMAGRMGNARVTVQNLTIHAIDTENNL 198

Query: 189 ILVKGCVPGAKKNSWILVRDSFKSA 213
           ILV G +PG  K   +++R + K A
Sbjct: 199 ILVSGAIPG-NKGGVVVIRTAVKGA 222


>gi|221069450|ref|ZP_03545555.1| ribosomal protein L3 [Comamonas testosteroni KF-1]
 gi|264676442|ref|YP_003276348.1| ribosomal protein L3 [Comamonas testosteroni CNB-2]
 gi|299531236|ref|ZP_07044647.1| 50S ribosomal protein L3 [Comamonas testosteroni S44]
 gi|220714473|gb|EED69841.1| ribosomal protein L3 [Comamonas testosteroni KF-1]
 gi|262206954|gb|ACY31052.1| ribosomal protein L3 [Comamonas testosteroni CNB-2]
 gi|298720819|gb|EFI61765.1| 50S ribosomal protein L3 [Comamonas testosteroni S44]
          Length = 224

 Score =  167 bits (423), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 92/216 (42%), Positives = 130/216 (60%), Gaps = 13/216 (6%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  +PVTV+ + N +V   +T + +GY+A+QV  G  K   V+K
Sbjct: 8   GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVALQVTFGARKASRVTK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDD-------LLPVGSVFSPSYFTVGQLVDVTGMTI 116
           P  G  +   V   +   EFRV  +         +LPV  +FS     VGQ VDV G +I
Sbjct: 68  PQAGHLAKAGVEAGEVTREFRVTDETAGKYAAGAVLPVAELFS-----VGQKVDVQGTSI 122

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           GKG++G +KRHNF   RA+HG S SH   GS G  QDPGRVF  K+M G MG   VT +N
Sbjct: 123 GKGYAGTIKRHNFSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTTQN 182

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           L+VV +D+ R L+L+KG +PGA K  ++ VR + K+
Sbjct: 183 LDVVRIDEARQLLLIKGAIPGA-KGGFVSVRPAIKA 217


>gi|296130495|ref|YP_003637745.1| 50S ribosomal protein L3 [Cellulomonas flavigena DSM 20109]
 gi|296022310|gb|ADG75546.1| 50S ribosomal protein L3 [Cellulomonas flavigena DSM 20109]
          Length = 219

 Score =  167 bits (423), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 91/211 (43%), Positives = 127/211 (60%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           + ++  KLGMT V++  GR +PVTVL +    V   R+ + +GY AVQ+  G+   + V+
Sbjct: 11  TALLGTKLGMTQVWDEAGRLVPVTVLAVGTNVVTQVRSAESDGYAAVQLAYGQIDPRKVT 70

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F    V+P++ + E R     +   +G   +   F  GQ+VDVTG T GKG +G
Sbjct: 71  KPLKGHFEKAGVTPRRHVAEIRTSNAAEFT-LGQEITAGAFEAGQVVDVTGTTKGKGTAG 129

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    P RVFK  KMAGRMG  R T +NL V +V
Sbjct: 130 VMKRHGFHGVGASHGAHRNHRKPGSIGGASTPSRVFKGLKMAGRMGVARQTTQNLTVHAV 189

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+LVKG VPG  K   ++VR + K A
Sbjct: 190 DAEKGLLLVKGAVPG-PKGGVVVVRSAVKGA 219


>gi|160895840|ref|YP_001561422.1| 50S ribosomal protein L3 [Delftia acidovorans SPH-1]
 gi|226725161|sp|A9BPR8|RL3_DELAS RecName: Full=50S ribosomal protein L3
 gi|160361424|gb|ABX33037.1| ribosomal protein L3 [Delftia acidovorans SPH-1]
          Length = 224

 Score =  167 bits (423), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 92/216 (42%), Positives = 131/216 (60%), Gaps = 13/216 (6%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  +PVTV+ + N +V   +T + +GY+A+QV  G  K   V+K
Sbjct: 8   GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVALQVTFGSRKASRVTK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDD-------DLLPVGSVFSPSYFTVGQLVDVTGMTI 116
           P  G  +   V   + + EFRV ++         +LPV  +FS     VGQ VDV G +I
Sbjct: 68  PEAGHLAKAGVEAGEVMGEFRVTEETAGKYAAGSVLPVAELFS-----VGQKVDVQGTSI 122

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           GKGF+G +KRHNF   RA+HG S SH   GS    QDPGRVF  KKM G MG   +T +N
Sbjct: 123 GKGFAGTIKRHNFRSQRASHGNSRSHNVPGSISMAQDPGRVFPGKKMTGHMGDETITTQN 182

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           L+VV +D+ R L+L+KG VPG+ K  ++ VR + K+
Sbjct: 183 LDVVRIDEARQLLLIKGAVPGS-KGGFVTVRPAIKA 217


>gi|325282640|ref|YP_004255181.1| 50S ribosomal protein L3 [Deinococcus proteolyticus MRP]
 gi|324314449|gb|ADY25564.1| 50S ribosomal protein L3 [Deinococcus proteolyticus MRP]
          Length = 206

 Score =  167 bits (423), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 93/195 (47%), Positives = 118/195 (60%), Gaps = 6/195 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  K+GMT ++  + R +PVTV+    C VV  +T + +GY AVQ+G G+ K K ++K
Sbjct: 3   GILGTKIGMTQIWK-DDRAVPVTVILAGPCPVVQRKTNEVDGYEAVQIGFGDRKEKGLNK 61

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G     ++SP + L EFR     D  P G       F  G+ +DVTG + GKGF G 
Sbjct: 62  PQLGHLKKADISPVRYLREFR-----DFSPEGDEVRVDVFGEGEKIDVTGTSKGKGFQGV 116

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR NF G  A+HG    HR  GS G R+ PGRV+K KKMAG MG  RVTV+NLEVV V 
Sbjct: 117 MKRWNFAGGPASHGAKKWHRRPGSIGQRKTPGRVYKGKKMAGHMGDERVTVQNLEVVEVR 176

Query: 184 DKRGLILVKGCVPGA 198
               LILVKG VPGA
Sbjct: 177 PDENLILVKGAVPGA 191


>gi|260362276|ref|ZP_05775243.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus K5030]
 gi|308111331|gb|EFO48871.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus K5030]
          Length = 200

 Score =  167 bits (423), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 89/189 (47%), Positives = 121/189 (64%), Gaps = 1/189 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+  EG  IPVTV+ ++  +V   +TL+ +GY A+QV AG  K   V+K
Sbjct: 3   GLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
              G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF GA
Sbjct: 63  AEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELTVELFNETKKVDVTGTSKGKGFQGA 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKRGLILVK 192
            +R L+L+K
Sbjct: 182 AERNLLLIK 190


>gi|319443065|ref|ZP_07992221.1| 50S ribosomal protein L3 [Corynebacterium variabile DSM 44702]
          Length = 218

 Score =  167 bits (423), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 85/194 (43%), Positives = 118/194 (60%), Gaps = 1/194 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT +++ E R +PVTV+    C V   RT D +GY AVQ+  G+   + V K
Sbjct: 8   GILGKKLGMTQIFDEENRVVPVTVVEAGPCVVTQVRTKDTDGYEAVQIAFGDIDPRKVKK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ + E RV+ D     VG   +   F     VDVTG + GKG++GA
Sbjct: 68  PQAGHFKKAGVTPRRHVTEIRVE-DASAYEVGQDITAELFADVTFVDVTGTSKGKGYAGA 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G  A+HG   +HR  G  G    PGRVFK  +MAGRMG N+VT++NL++  VD
Sbjct: 127 MKRHGFAGQGASHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGNNQVTLQNLKIARVD 186

Query: 184 DKRGLILVKGCVPG 197
            +  L+L+KG +PG
Sbjct: 187 AESNLVLIKGAIPG 200


>gi|189424410|ref|YP_001951587.1| 50S ribosomal protein L3 [Geobacter lovleyi SZ]
 gi|226725181|sp|B3E7T5|RL3_GEOLS RecName: Full=50S ribosomal protein L3
 gi|189420669|gb|ACD95067.1| ribosomal protein L3 [Geobacter lovleyi SZ]
          Length = 211

 Score =  167 bits (423), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT ++  +G R+PVTV+    C V+  +T + +GY AVQVG        
Sbjct: 1   MNKGIIGKKLGMTQIFLEDGTRVPVTVVQAGPCVVLQKKTAEVDGYSAVQVGFETVNAAK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +   RG          + L E +++++ +L  +G   +   F  G L+DVTG +IGKGF
Sbjct: 61  ANSADRGHCVKAGKGVFRHLRELKLEQEAEL-NIGDELTVQQFEPGDLIDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRHNF G RA+HG S  HR+ GS GC   P RVFKNKKM G+MG  RVTV+ L+VV
Sbjct: 120 QGVIKRHNFKGGRASHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQMGNERVTVQRLQVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  + LIL+KG +P + KN+ ++++DS K+
Sbjct: 179 RVDADQNLILIKGAIPDS-KNNVVVIKDSVKA 209


>gi|309782834|ref|ZP_07677554.1| 50S ribosomal protein L3 [Ralstonia sp. 5_7_47FAA]
 gi|308918258|gb|EFP63935.1| 50S ribosomal protein L3 [Ralstonia sp. 5_7_47FAA]
          Length = 221

 Score =  167 bits (423), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/207 (44%), Positives = 127/207 (61%), Gaps = 3/207 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTVL + + +V   +T + +GY AVQV  G  +   
Sbjct: 5   MSLGLVGRKVGMTRIFTDDGDSIPVTVLEVGDNRVTQIKTDETDGYTAVQVTFGTRRASR 64

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQ--KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           V+KP+ G  +   V   + + EFRV   +  +  P G+  S   F VGQ +DV G+TIGK
Sbjct: 65  VTKPLAGHLAKAGVEAGEVIKEFRVDAARAAEFQP-GANISVDLFEVGQKIDVQGVTIGK 123

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           G++G +KR+NF   RA+HG S SH   GS G  QDPGRVF  K+M G MG    TV+NLE
Sbjct: 124 GYAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLE 183

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWIL 205
           +  +D +R L+LVKG +PGAK    I+
Sbjct: 184 IAKIDAERKLLLVKGAIPGAKGGQVIV 210


>gi|227115272|ref|ZP_03828928.1| 50S ribosomal protein L3 [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 209

 Score =  167 bits (423), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/202 (45%), Positives = 126/202 (62%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY A QV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAAQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L EFR+ + ++   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRTLREFRLSEGEEFT-VGQSISVEIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA  +  I+
Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203


>gi|283835737|ref|ZP_06355478.1| hypothetical protein CIT292_10129 [Citrobacter youngae ATCC 29220]
 gi|291068416|gb|EFE06525.1| 50S ribosomal protein L3 [Citrobacter youngae ATCC 29220]
          Length = 209

 Score =  167 bits (423), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 93/195 (47%), Positives = 124/195 (63%), Gaps = 1/195 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+  D +   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFTKAGVEAGRGLWEFRLA-DGEEYTVGQSISVELFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGA 198
            +R L+LVKG VPGA
Sbjct: 182 AERNLLLVKGGVPGA 196


>gi|161506006|ref|YP_001573118.1| 50S ribosomal protein L3 [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|189029478|sp|A9MN46|RL3_SALAR RecName: Full=50S ribosomal protein L3
 gi|160867353|gb|ABX23976.1| hypothetical protein SARI_04187 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 209

 Score =  167 bits (423), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 93/195 (47%), Positives = 125/195 (64%), Gaps = 1/195 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGVKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLAEGEEYT-VGQSISVELFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGA 198
            +R L+LVKG VPGA
Sbjct: 182 AERNLLLVKGGVPGA 196


>gi|309789667|ref|ZP_07684248.1| ribosomal protein L3 [Oscillochloris trichoides DG6]
 gi|308228403|gb|EFO82050.1| ribosomal protein L3 [Oscillochloris trichoides DG6]
          Length = 209

 Score =  167 bits (423), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 93/212 (43%), Positives = 132/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M SG++ RKLGM  V++ +G  IPVTV+    C V   RT++++GY AVQ+G  + + + 
Sbjct: 1   MISGMLGRKLGMMQVFSDKGEVIPVTVIAAGPCIVTQVRTVERDGYAAVQIGYEQVEPRK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G   + N    + L EF      +  P G V +   F  GQ +DV+G + G+GF
Sbjct: 61  LTKPQQGHLKAANAM-LRYLREFPADNPQEHTP-GEVINVELFKPGQKIDVSGTSKGRGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH F G   THG S  HR+ GS G    PGRV+K +KMAGRMGG RVT++NLEVV
Sbjct: 119 AGVVKRHGFRGGPKTHGQSDRHRAPGSIGAGTTPGRVWKGQKMAGRMGGKRVTIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ LILVKG VPGA +   + +R + K+
Sbjct: 179 EVLPEKNLILVKGSVPGA-RTGLLEIRRAVKA 209


>gi|154249817|ref|YP_001410642.1| 50S ribosomal protein L3 [Fervidobacterium nodosum Rt17-B1]
 gi|171769379|sp|A7HM52|RL3_FERNB RecName: Full=50S ribosomal protein L3
 gi|154153753|gb|ABS60985.1| ribosomal protein L3 [Fervidobacterium nodosum Rt17-B1]
          Length = 207

 Score =  167 bits (423), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/208 (44%), Positives = 129/208 (62%), Gaps = 4/208 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ARK+GMT ++  E + +PVTVL    C VV  +T++K+GY A+Q+G  E   K ++KP
Sbjct: 4   IIARKVGMTRLWKDE-KVVPVTVLKAGPCVVVQKKTVEKDGYNAIQLGFEEVNEKKLTKP 62

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M G F   NV P + L EFRV+ + D   VG   + + F  G  +D+TG T G+G+SGAM
Sbjct: 63  MLGVFKKANVKPMRVLKEFRVE-NVDQYSVGQEITVAIFQEGDKIDITGWTKGRGYSGAM 121

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR NF G    HG    HR  GS G   +P R+FK K+M GR G  RVT+ N EVV++D 
Sbjct: 122 KRWNFQGGPKAHGAKF-HRELGSVGQHTEPARIFKGKRMPGRYGNERVTILNSEVVTIDA 180

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +  L+ VKG VPGA + S +++R + K 
Sbjct: 181 QNNLLAVKGGVPGA-RGSLVIIRSAVKQ 207


>gi|187930364|ref|YP_001900851.1| 50S ribosomal protein L3 [Ralstonia pickettii 12J]
 gi|241664532|ref|YP_002982892.1| 50S ribosomal protein L3 [Ralstonia pickettii 12D]
 gi|226730553|sp|B2UEL9|RL3_RALPJ RecName: Full=50S ribosomal protein L3
 gi|187727254|gb|ACD28419.1| ribosomal protein L3 [Ralstonia pickettii 12J]
 gi|240866559|gb|ACS64220.1| ribosomal protein L3 [Ralstonia pickettii 12D]
          Length = 217

 Score =  167 bits (422), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/207 (44%), Positives = 127/207 (61%), Gaps = 3/207 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTVL + + +V   +T + +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTDDGDSIPVTVLEVGDNRVTQIKTDETDGYTAVQVTFGTRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQ--KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           V+KP+ G  +   V   + + EFRV   +  +  P G+  S   F VGQ +DV G+TIGK
Sbjct: 61  VTKPLAGHLAKAGVEAGEVIKEFRVDAARAAEFQP-GANISVDLFEVGQKIDVQGVTIGK 119

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           G++G +KR+NF   RA+HG S SH   GS G  QDPGRVF  K+M G MG    TV+NLE
Sbjct: 120 GYAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLE 179

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWIL 205
           +  +D +R L+LVKG +PGAK    I+
Sbjct: 180 IAKIDAERKLLLVKGAIPGAKGGQVIV 206


>gi|94312248|ref|YP_585458.1| 50S ribosomal protein L3 [Cupriavidus metallidurans CH34]
 gi|122987810|sp|Q1LI37|RL3_RALME RecName: Full=50S ribosomal protein L3
 gi|93356100|gb|ABF10189.1| 50S ribosomal subunit protein L3 [Cupriavidus metallidurans CH34]
          Length = 214

 Score =  167 bits (422), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 89/206 (43%), Positives = 125/206 (60%), Gaps = 1/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+ + + +V   +T + +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTDDGDSIPVTVVEVGDNRVTQIKTDETDGYTAVQVTFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + + EFR+       L  GS  S   F VGQ +DV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEVIKEFRIDAAKAAELQAGSSLSVDLFQVGQKIDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KRH+F   RATHG S SH   GS G  QDPGRVF  K+M G +G    TV+NLE+
Sbjct: 121 YAGTIKRHHFASGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDATRTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205
             +D +R L+LVKG +PG+K    I+
Sbjct: 181 AKIDAERKLLLVKGAIPGSKGGKVIV 206


>gi|257470826|ref|ZP_05634916.1| 50S ribosomal protein L3P [Fusobacterium ulcerans ATCC 49185]
          Length = 208

 Score =  167 bits (422), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 91/209 (43%), Positives = 134/209 (64%), Gaps = 3/209 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++A+K+GMT ++  +G+ IPVTV+      V+  +T++ +GY A+Q+G  E K KN +
Sbjct: 2   SGILAKKIGMTQIFE-DGKFIPVTVVEAGPNYVLQKKTVENDGYTALQLGFDEKKEKNTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    V+P++ + E RV   +    +G           + VD+TG + GKG +G
Sbjct: 61  KPIMGIFKKAGVNPQRFVKELRVDSVEGF-ELGQEIKADVLAEVEYVDITGTSKGKGTAG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF G RA+HGVS +HR  GS G    PG+V + KKMAG+ G   VTV+NL+VV V
Sbjct: 120 VMKRHNFAGNRASHGVSRNHRLGGSIGMSSWPGKVLRGKKMAGQYGNATVTVQNLKVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D +  L+L+KG VPG+ KNS+I+V+ + K
Sbjct: 180 DVENNLLLIKGAVPGS-KNSYIVVKPAVK 207


>gi|182680994|ref|YP_001829154.1| 50S ribosomal protein L3 [Xylella fastidiosa M23]
 gi|182631104|gb|ACB91880.1| ribosomal protein L3 [Xylella fastidiosa M23]
 gi|307579463|gb|ADN63432.1| 50S ribosomal protein L3 [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 210

 Score =  167 bits (422), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/209 (46%), Positives = 129/209 (61%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G V RK GM+ V+  +G  IPVT++     +VV  +T D +GY AVQV  G  +   V+K
Sbjct: 2   GFVGRKAGMSRVFLEDGCSIPVTLIEATANRVVQIKTSDVDGYDAVQVTVGSRRSVLVNK 61

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P  G F+   V   + L+EFRV+K       VGS    S F VGQ VD+ G+T GKGF G
Sbjct: 62  PESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGFQG 121

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHNF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  + +V+NLEV+ +
Sbjct: 122 TIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVKQSVQNLEVIKI 181

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D +R LI V+G +PGA     +L+R + K
Sbjct: 182 DVERCLIAVRGAIPGASGGD-VLIRSASK 209


>gi|304438362|ref|ZP_07398303.1| 50S ribosomal protein L3 [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304368728|gb|EFM22412.1| 50S ribosomal protein L3 [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 220

 Score =  167 bits (422), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/215 (45%), Positives = 131/215 (60%), Gaps = 5/215 (2%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RKLGMT ++  EGR +PVTV+   N  V+  +T++ +GY AVQ+G G+ K KNV+KP
Sbjct: 8   ILGRKLGMTQIFTEEGRVVPVTVVESGNNFVLRSKTVESDGYNAVQIGFGDIKEKNVTKP 67

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           ++G F    V   + + E R+    +   VG       F  G LVDV G + GKGF+G +
Sbjct: 68  LKGQFEKAGVKAVRFIREMRLAAPSE-YNVGDTIGVDIFAEGDLVDVVGTSKGKGFAGGI 126

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCR-QDP-GRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           KRHNF      HG S SHR  GSTG     P GRV K KK+ GRMGG RVTV+ L VV V
Sbjct: 127 KRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLTVVRV 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           D  R LIL+KG +PG KK  +++++D+ K A   K
Sbjct: 186 DADRNLILIKGAIPGPKKG-FVVIKDTVKPAKAAK 219


>gi|111220546|ref|YP_711340.1| 50S ribosomal protein L3 [Frankia alni ACN14a]
 gi|123339021|sp|Q0RRS1|RL3_FRAAA RecName: Full=50S ribosomal protein L3
 gi|111148078|emb|CAJ59746.1| 50S ribosomal subunit protein L3 [Frankia alni ACN14a]
          Length = 234

 Score =  167 bits (422), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/208 (44%), Positives = 122/208 (58%), Gaps = 2/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      V   +T D +GY AVQ+G GE   + ++K
Sbjct: 8   GLLGTKLGMTQVWDANNRVVPVTVIKAGPNVVTQVKTPDSDGYSAVQLGYGEIDPRKINK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P RG F++  V+P++ L E R     +  P G   +   F  G +VDVTG + GKGF+G 
Sbjct: 68  PARGHFATSGVTPRRHLVELRTADAGNYRP-GQELTGEVFAEGTVVDVTGTSKGKGFAGV 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GL A HGV   HRS GS G    PGRVFK  +MAGRMG  R T   L + +VD
Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGHARTTTPGLTIHAVD 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +RG +LVKG +PG      + VR + K
Sbjct: 187 TERGFLLVKGAIPG-PDGGLVFVRSAAK 213


>gi|157148900|ref|YP_001456219.1| 50S ribosomal protein L3 [Citrobacter koseri ATCC BAA-895]
 gi|166233131|sp|A8AQM0|RL3_CITK8 RecName: Full=50S ribosomal protein L3
 gi|157086105|gb|ABV15783.1| hypothetical protein CKO_04738 [Citrobacter koseri ATCC BAA-895]
          Length = 209

 Score =  167 bits (422), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/195 (47%), Positives = 125/195 (64%), Gaps = 1/195 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLAEGEEYT-VGQSISVELFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGA 198
            +R L+LVKG VPGA
Sbjct: 182 AERNLLLVKGGVPGA 196


>gi|119718125|ref|YP_925090.1| 50S ribosomal protein L3P [Nocardioides sp. JS614]
 gi|166990937|sp|A1SNL8|RL3_NOCSJ RecName: Full=50S ribosomal protein L3
 gi|119538786|gb|ABL83403.1| LSU ribosomal protein L3P [Nocardioides sp. JS614]
          Length = 223

 Score =  167 bits (422), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 91/213 (42%), Positives = 125/213 (58%), Gaps = 2/213 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      V   RT   +GY A+QVG GE   + V+K
Sbjct: 9   GLLGTKLGMTQVWDENNRVVPVTVIAAGTNVVTQVRTPATDGYNAIQVGYGEIDGRKVTK 68

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F     +P++ L E R     D   VG   +   F  G+ +DVTG + GKGF+G 
Sbjct: 69  PQAGHFGKAGTTPRRHLVEIRTALAADYT-VGQELAVDTFAAGEEIDVTGTSKGKGFAGT 127

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G+ A+HG   +HR  GS G    PGRVFK  +MAGRMG + VT +N+ V +VD
Sbjct: 128 MKRHGFAGVSASHGAHRNHRKPGSIGACATPGRVFKGVRMAGRMGTDTVTTQNVTVHAVD 187

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
             +GLIL+KG VPG  K   +++R + KS++  
Sbjct: 188 TAKGLILLKGAVPG-PKGGLVVLRSAAKSSLTS 219


>gi|134096321|ref|YP_001101396.1| 50S ribosomal protein L3 [Herminiimonas arsenicoxydans]
 gi|212288400|sp|A4G9T8|RL3_HERAR RecName: Full=50S ribosomal protein L3
 gi|133740224|emb|CAL63275.1| 50S ribosomal subunit protein L3 [Herminiimonas arsenicoxydans]
          Length = 224

 Score =  167 bits (422), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/209 (45%), Positives = 125/209 (59%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  IPVTVL + N +V   +T D +GY AVQV  G  +   V+K
Sbjct: 10  GLLGRKVGMMRIFTDDGDSIPVTVLDVSNNRVTQIKTPDVDGYSAVQVAFGSRRASRVNK 69

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
              G  +   V     L EFRV       L VG V + S F VGQ VDV G+TIGKG++G
Sbjct: 70  ASAGHHAKAGVEAGTVLKEFRVAATAASELKVGDVIAASLFEVGQKVDVQGVTIGKGYAG 129

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRH+F   RATHG S SH   GS G  QDPGRVF  K+M G +G    T++NLE+  +
Sbjct: 130 TIKRHHFASGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVARTMQNLEIARI 189

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D  R L+LVKG VPGA KN  ++V  + K
Sbjct: 190 DADRQLLLVKGAVPGA-KNGQVIVSPAVK 217


>gi|323141356|ref|ZP_08076247.1| 50S ribosomal protein L3 [Phascolarctobacterium sp. YIT 12067]
 gi|322414105|gb|EFY04933.1| 50S ribosomal protein L3 [Phascolarctobacterium sp. YIT 12067]
          Length = 213

 Score =  167 bits (422), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 94/213 (44%), Positives = 133/213 (62%), Gaps = 5/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT ++  +GR IPVTV+    C V+ ++T + +GY AVQ+G GE K K+
Sbjct: 1   MAKGILGKKLGMTQIFEADGRLIPVTVVEAGPCVVLQNKTEETDGYNAVQLGFGEIKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KPM+G F    V+P K + E R+    +   VG   +   F  G+L+D +G++ GKGF
Sbjct: 61  TTKPMKGHFDKAGVTPVKFVRELRLAAPSEYA-VGDKIAADIFAAGELIDASGVSRGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTG-CRQDP-GRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KRHNF      HG S SHR  GS G     P GRV K KK+ GRMG   VTV+ L 
Sbjct: 120 AGTIKRHNFSRGPMKHG-SKSHREPGSMGPMHSGPGGRVIKGKKLPGRMGNANVTVQRLT 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           VV VD +R LILVKG +PGA   S+++++++ K
Sbjct: 179 VVKVDAERNLILVKGAIPGA-TGSYVVLKETVK 210


>gi|119963305|ref|YP_948657.1| 50S ribosomal protein L3 [Arthrobacter aurescens TC1]
 gi|171704615|sp|A1R8U5|RL3_ARTAT RecName: Full=50S ribosomal protein L3
 gi|119950164|gb|ABM09075.1| ribosomal protein L3 [Arthrobacter aurescens TC1]
          Length = 216

 Score =  167 bits (422), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 89/210 (42%), Positives = 125/210 (59%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   + IPVTV+  D+  +   R  + +GY+AVQ+G G+   + V+K
Sbjct: 9   GLLGTKLGMTQVWDENNKLIPVTVVQADSNVITQLRNAEVDGYVAVQIGYGQIDPRKVTK 68

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+P++ + E R   D     +G   S   F  GQ +DV G + GKGF+G 
Sbjct: 69  PLAGHFEKAGVTPRRHVVELRT-ADAASYELGQELSVEIFEAGQKIDVVGTSKGKGFAGV 127

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G+ A+HG   +HR  GS G    P RVFK  KMAGRMG  R T  NL V ++D
Sbjct: 128 MKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGLKMAGRMGAERHTTLNLTVHAID 187

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++ L+L+KG VPGA +   +LVR + K A
Sbjct: 188 AEKSLLLIKGAVPGA-RGQVVLVRTAVKGA 216


>gi|307267014|ref|ZP_07548530.1| 50S ribosomal protein L3 [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306917999|gb|EFN48257.1| 50S ribosomal protein L3 [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 210

 Score =  167 bits (422), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/212 (45%), Positives = 132/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +K GMT ++N +G  IPVTV+    C VV  +T++ +GY A+QVG G+ K K 
Sbjct: 1   MKKGILGKKHGMTQIFNEKGEVIPVTVIEAGPCVVVQKKTVETDGYNAIQVGFGDVKEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+ G F  V V  K+ L EF++  D +   VGS      F  G  VDVTG++ GKGF
Sbjct: 61  LTKPLIGHFKKVGVPFKRYLREFKLD-DINGYEVGSEIKVDIFKPGDRVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR+       +HG S  HR  GS G   DPGR FK K M G MG  RVT++NLEVV
Sbjct: 120 AGVVKRYGANRGPMSHG-SKYHRRVGSMGATTDPGRTFKGKIMPGHMGHERVTIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  L+LVKG VPG  K S ++++DS KS
Sbjct: 179 KVDPELNLLLVKGSVPGP-KGSLLIIKDSVKS 209


>gi|327402783|ref|YP_004343621.1| 50S ribosomal protein L3P [Fluviicola taffensis DSM 16823]
 gi|327318291|gb|AEA42783.1| LSU ribosomal protein L3P [Fluviicola taffensis DSM 16823]
          Length = 204

 Score =  167 bits (422), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 90/203 (44%), Positives = 125/203 (61%), Gaps = 4/203 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT VY+ EG+  P TV+    C V   +T D++GY A+Q+G GE + KN   
Sbjct: 3   GIIGKKIGMTSVYSAEGKATPCTVIEAGPCVVTQVKTQDRDGYEAIQLGFGERREKNTPN 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
            ++G F   N +PK KL EF   K  D L +G V     F  G+ V + G + GKGF G 
Sbjct: 63  ALKGHFKKANTTPKSKLVEF---KGFDGLNLGDVVDVQLFEQGEFVGIAGTSKGKGFQGV 119

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRHNFGG+ ++THG     R+ GS G    P RVFK  +MAG+MG  RVTV+NLEV+ V
Sbjct: 120 VKRHNFGGVGQSTHGQHNRLRAPGSIGACSYPARVFKGMRMAGQMGNKRVTVENLEVLRV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205
              + LI+VKG +PG K ++ I+
Sbjct: 180 LADKNLIVVKGSIPGPKGSTVII 202


>gi|13432203|sp|P30762|RL3_MYCLE RecName: Full=50S ribosomal protein L3
          Length = 217

 Score =  167 bits (422), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 93/212 (43%), Positives = 126/212 (59%), Gaps = 3/212 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   R +PVTV+      V   RTL+++GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTLERDGYSAVQLAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP+ G ++S  V+P++ L E R+   D      VG   +   F     VDVTG + GKG
Sbjct: 63  NKPVTGQYNSAGVNPRRYLAELRLDHPDAAAEYEVGQELTAEIFADATYVDVTGTSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG MKRH F G  A+HG    HR  GS G    P RVFK  +MAGRMG +RVTV+NL V
Sbjct: 123 FSGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             VD + G++L+KG VPG +    ++VR + K
Sbjct: 183 HKVDTENGVLLIKGAVPG-RTGGLVMVRSAIK 213


>gi|33564555|emb|CAE43871.1| 50S ribosomal protein L3 [Bordetella pertussis Tohama I]
          Length = 214

 Score =  167 bits (422), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/207 (44%), Positives = 124/207 (59%), Gaps = 3/207 (1%)

Query: 8   RKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRG 67
           RK+GMT ++  +G  IPVTVL + N +V   ++L+ +GY A+QV  G  +   V KP  G
Sbjct: 3   RKVGMTRIFTEDGESIPVTVLDVSNNRVTQVKSLESDGYAAIQVTYGTRRATRVVKPQAG 62

Query: 68  FFSSVNVSPKKKLFEFRVQKDDDLLPVGS--VFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            ++         L EFR+             +   S F  GQ VDVTG +IGKGF+G +K
Sbjct: 63  HYAKAGAEAGSILKEFRLDPARAAEFAAGAVIAVESVFEAGQQVDVTGTSIGKGFAGTIK 122

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           RHNFG  RA+HG S SHR  GS G  QDPGR+F  K+M+G MG    TV+NL+VV VD +
Sbjct: 123 RHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMSGHMGDVTRTVQNLDVVRVDAE 182

Query: 186 RGLILVKGCVPGAKKNSWILVRDSFKS 212
           RGL++VKG VPG      ++VR + K+
Sbjct: 183 RGLLMVKGAVPG-HAGGDVIVRPAVKA 208


>gi|15828002|ref|NP_302265.1| 50S ribosomal protein L3 [Mycobacterium leprae TN]
 gi|221230479|ref|YP_002503895.1| 50S ribosomal protein L3 [Mycobacterium leprae Br4923]
 gi|13093555|emb|CAC30817.1| 50S ribosomal protein L3 [Mycobacterium leprae]
 gi|219933586|emb|CAR71959.1| 50S ribosomal protein L3 [Mycobacterium leprae Br4923]
          Length = 218

 Score =  167 bits (422), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 93/212 (43%), Positives = 126/212 (59%), Gaps = 3/212 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   R +PVTV+      V   RTL+++GY AVQ+  GE   + V
Sbjct: 4   RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTLERDGYSAVQLAYGEISPRKV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP+ G ++S  V+P++ L E R+   D      VG   +   F     VDVTG + GKG
Sbjct: 64  NKPVTGQYNSAGVNPRRYLAELRLDHPDAAAEYEVGQELTAEIFADATYVDVTGTSKGKG 123

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG MKRH F G  A+HG    HR  GS G    P RVFK  +MAGRMG +RVTV+NL V
Sbjct: 124 FSGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 183

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             VD + G++L+KG VPG +    ++VR + K
Sbjct: 184 HKVDTENGVLLIKGAVPG-RTGGLVMVRSAIK 214


>gi|261367803|ref|ZP_05980686.1| 50S ribosomal protein L3 [Subdoligranulum variabile DSM 15176]
 gi|282570601|gb|EFB76136.1| 50S ribosomal protein L3 [Subdoligranulum variabile DSM 15176]
          Length = 210

 Score =  167 bits (422), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 90/214 (42%), Positives = 126/214 (58%), Gaps = 6/214 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +KLGMT +++  G+ +PVT++    C VV  +T++ +GY AVQ+G GE   K 
Sbjct: 1   MQKGIIGKKLGMTQLFDANGKVVPVTIIEAGPCTVVQKKTVESDGYQAVQMGYGEVSAKK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           V+K  +G F   +V+PK+ L EFR    DD+  L VG +     F  G  VDV G + GK
Sbjct: 61  VNKAAKGHFDKADVAPKRTLREFRF---DDIASLNVGDILKADVFAEGDKVDVVGTSKGK 117

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           G+ G +KR     LR +HG     R  GS G    P RVFK K++ G MG  RVTV+NL 
Sbjct: 118 GYQGVIKRFGQHRLRESHGTGPVARHAGSNGSTSTPSRVFKGKRLPGHMGAVRVTVQNLS 177

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VV VD +  LI +KG +PG  K S + + DS K+
Sbjct: 178 VVKVDAENNLIAIKGAIPGP-KGSVVTIHDSVKA 210


>gi|326390661|ref|ZP_08212216.1| 50S ribosomal protein L3 [Thermoanaerobacter ethanolicus JW 200]
 gi|325993339|gb|EGD51776.1| 50S ribosomal protein L3 [Thermoanaerobacter ethanolicus JW 200]
          Length = 210

 Score =  166 bits (421), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/214 (45%), Positives = 133/214 (62%), Gaps = 7/214 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +K GMT ++N +G  IPVTV+    C VV  +T++ +GY A+QVG G+ K K 
Sbjct: 1   MKKGILGKKHGMTQIFNEKGEVIPVTVIEAGPCVVVQKKTVETDGYNAIQVGFGDVKEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           ++KP+ G F  V V  K+ L EF++   DD+    VGS      F  G  VDVTG++ GK
Sbjct: 61  LTKPLIGHFKKVGVPFKRYLREFKL---DDISGYEVGSEIKVDIFKPGDRVDVTGISKGK 117

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF+G +KR+       +HG S  HR  GS G   DPGR FK K M G MG  RVT++NLE
Sbjct: 118 GFAGVVKRYGANRGPMSHG-SKYHRRVGSMGATTDPGRTFKGKIMPGHMGHERVTIQNLE 176

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VV VD +  L+LVKG VPG  K S ++++DS KS
Sbjct: 177 VVKVDPELNLLLVKGSVPGP-KGSLLIIKDSVKS 209


>gi|299143194|ref|ZP_07036274.1| 50S ribosomal protein L3 [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298517679|gb|EFI41418.1| 50S ribosomal protein L3 [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 210

 Score =  166 bits (421), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 90/208 (43%), Positives = 134/208 (64%), Gaps = 3/208 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT +++ EG+  PVTV+  +   VV  +T++ +GY AVQV  G  K + V+KP
Sbjct: 4   LIGKKIGMTQIFDEEGKVTPVTVIEAEPNVVVQKKTVEVDGYNAVQVATGFVKERRVNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           ++G F+   V  KK L EFR ++ ++   +G       F+VG+ +DVTG + GKG  G +
Sbjct: 64  LKGHFAKAGVECKKNLREFRTEEVENY-NIGDEIKVDLFSVGEFIDVTGTSKGKGTQGVI 122

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           +RH FG  R THG S  HR  G  G    PG+VFKN +MAG+MG  +VTV+NLEVV VD 
Sbjct: 123 RRHGFGRGRETHG-SKFHRMPGGMGAATYPGKVFKNHRMAGKMGNEQVTVQNLEVVRVDL 181

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
           ++ LILVKG +PG KK   + ++++ K+
Sbjct: 182 EKNLILVKGAIPGPKK-GIVTLKETVKA 208


>gi|289665137|ref|ZP_06486718.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289669344|ref|ZP_06490419.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 216

 Score =  166 bits (421), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 94/211 (44%), Positives = 129/211 (61%), Gaps = 4/211 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G V RK GM+  +  +GR +PVT++     ++   +T++ +GY AVQ+  G  +   V+K
Sbjct: 8   GFVGRKAGMSRFFTEDGRSVPVTLIEATPNRIAQIKTVEVDGYSAVQITVGARRAALVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           P  G F+   V   + L+EFRV+ D  L    VG       F VGQ VDV G+T GKGF 
Sbjct: 68  PAAGHFAKAKVEAGRGLWEFRVE-DAQLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQ 126

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR+NF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  + + +NLEVV 
Sbjct: 127 GTIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVK 186

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VD +RGLI ++G VPGA     ++VR + K+
Sbjct: 187 VDVERGLIAIRGAVPGAAGGD-VIVRPASKA 216


>gi|332038837|gb|EGI75279.1| 50S ribosomal protein L3 [Pseudoalteromonas haloplanktis ANT/505]
          Length = 211

 Score =  166 bits (421), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 91/198 (45%), Positives = 120/198 (60%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+     ++   ++   +GY A+QV AG  K   
Sbjct: 1   MALGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRIAQIKSDATDGYNALQVTAGTKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+   V   + L+EFR+   +    VG+  +   F     VDVTG + GKGF
Sbjct: 61  VNKAKAGHFAKAGVEAGRGLWEFRLNGGEGDFEVGAELTVELFNEINKVDVTGTSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG MG  RVT +NLE+V
Sbjct: 121 QGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGHMGAERVTTQNLELV 180

Query: 181 SVDDKRGLILVKGCVPGA 198
            VD +R L+LVKG VPGA
Sbjct: 181 RVDAERNLLLVKGAVPGA 198


>gi|237728655|ref|ZP_04559136.1| 50S ribosomal protein L3 [Citrobacter sp. 30_2]
 gi|226909277|gb|EEH95195.1| 50S ribosomal protein L3 [Citrobacter sp. 30_2]
          Length = 209

 Score =  166 bits (421), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/195 (47%), Positives = 124/195 (63%), Gaps = 1/195 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+  D +   VG   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLA-DGEEYTVGQNISVELFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGA 198
            +R L+LVKG VPGA
Sbjct: 182 AERNLLLVKGGVPGA 196


>gi|254303420|ref|ZP_04970778.1| ribosomal protein L3 [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148323612|gb|EDK88862.1| ribosomal protein L3 [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 211

 Score =  166 bits (421), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT ++  +G+ +PVTV+      V+  +T +K+GY+A+Q+G  E K KN +
Sbjct: 2   SGILGKKIGMTQIFE-DGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   V P++ + E  V+  D    +G           Q VD+TG + GKG SG
Sbjct: 61  KPLMGIFNKAGVKPQRFVKELEVESVDGY-ELGQEIKVDVLAEVQYVDITGTSKGKGTSG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGG RA+HGVS +HR  GS G    PG+V K K+MAG+ G   VTV+NL+VV V
Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D +  L+L+KG VPGA KN ++++R + K  +
Sbjct: 180 DAEHNLLLIKGAVPGA-KNGYLVIRPAVKKVI 210


>gi|160881785|ref|YP_001560753.1| ribosomal protein L3 [Clostridium phytofermentans ISDg]
 gi|189042839|sp|A9KJJ4|RL3_CLOPH RecName: Full=50S ribosomal protein L3
 gi|160430451|gb|ABX44014.1| ribosomal protein L3 [Clostridium phytofermentans ISDg]
          Length = 211

 Score =  166 bits (421), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/212 (45%), Positives = 126/212 (59%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N  G   PVTVL    C V   +T+D +GY AVQVG G+ +   
Sbjct: 1   MKKAILATKIGMTQIFNENGVLTPVTVLQAGPCAVTQVKTVDNDGYAAVQVGFGDIRETL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G F+   V+ K+ L EFR +   D   VG       FT G  +D TG + GKGF
Sbjct: 61  VNKPQKGHFAKAGVANKRFLKEFRFENAADYT-VGQEIKVDIFTAGDKIDATGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    PGRVFK K M G+MG  +VTV+NLEVV
Sbjct: 120 QGAIKRHGLSRGPMGHG-SKFHRHAGSNGAATTPGRVFKGKHMPGQMGNVKVTVQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +D    LILVKG VPG KK + I+++++ KS
Sbjct: 179 KIDVDNNLILVKGAVPGPKK-AMIMLKETVKS 209


>gi|119502924|ref|ZP_01625009.1| 50S ribosomal protein L3 [marine gamma proteobacterium HTCC2080]
 gi|119461270|gb|EAW42360.1| 50S ribosomal protein L3 [marine gamma proteobacterium HTCC2080]
          Length = 211

 Score =  166 bits (421), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/211 (46%), Positives = 129/211 (61%), Gaps = 1/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT V+  EG  +PVTV+ +   +V   + L+ +GY A+QV  G+ K   
Sbjct: 1   MTIGIVGRKSGMTRVFTDEGVSVPVTVVEVLPNRVTQIKDLETDGYRAIQVTTGDRKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKP  G ++    +    L+EFR+   ++   VGS  +   F  GQ VDV G + GKGF
Sbjct: 61  VSKPAAGHYAKAGTAAGDGLWEFRLDGSEETFEVGSELTVERFEQGQKVDVAGRSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR NF    ATHG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT + LEVV
Sbjct: 121 QGAVKRWNFSMQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQGLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +D +R L+L+KG VPGA     ++VR + K
Sbjct: 181 RIDSERNLLLIKGAVPGAPGGH-VIVRPTVK 210


>gi|313673467|ref|YP_004051578.1| LSU ribosomal protein l3p [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312940223|gb|ADR19415.1| LSU ribosomal protein L3P [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 212

 Score =  166 bits (421), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/212 (44%), Positives = 130/212 (61%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ RK+GMT ++  EG  IPVTV+    CQVV  +T +K+GY A+Q+G  +   +N
Sbjct: 1   MLKALIGRKIGMTQIFTSEGNVIPVTVVQAGPCQVVQKKTTEKDGYNALQLGFDKILKEN 60

Query: 61  -VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++KPM G F    V   K L EF+V+  D+   VG   + S F  G +VDV G++IGKG
Sbjct: 61  KINKPMGGHFKKHGVDAHKTLKEFKVENPDEYQ-VGQEINVSVFAEGDIVDVQGVSIGKG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KRH F G  A HG S  HR+ GS G R+ PG   K KK+ GRMGG  VTV+ LEV
Sbjct: 120 FQGVIKRHGFAGGPAAHG-SDFHRAPGSIGMREWPGETLKGKKLPGRMGGKTVTVQKLEV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V V   + L+L+KG +PG   NS + ++++ K
Sbjct: 179 VKVLPDKNLLLIKGAIPG-HDNSIVFIKETTK 209


>gi|34764925|ref|ZP_00145270.1| LSU ribosomal protein L3P [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27885736|gb|EAA23133.1| LSU ribosomal protein L3P [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 211

 Score =  166 bits (421), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 135/212 (63%), Gaps = 3/212 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT ++  +G+ +PVTV+      V+  +T +K+GY+A+Q+G  E K KN +
Sbjct: 2   SGILGKKIGMTQIFE-DGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   V P++ + E  V+  D    +G        T  + VD+TG + GKG SG
Sbjct: 61  KPLMGIFNKAGVKPQRFVKELAVESVDGY-ELGQEIKVDVLTEVEYVDITGTSKGKGTSG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGG RA+HGVS +HR  GS G    PG+V K K+MAG+ G   VTV+NL+VV V
Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D +  L+L+KG VPGA KN ++++R + K  +
Sbjct: 180 DAEHNLLLIKGAVPGA-KNGYLVIRPAVKKVI 210


>gi|300690160|ref|YP_003751155.1| 50S ribosomal subunit protein L3 [Ralstonia solanacearum PSI07]
 gi|299077220|emb|CBJ49846.2| 50S ribosomal subunit protein L3 [Ralstonia solanacearum PSI07]
          Length = 220

 Score =  166 bits (421), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/213 (44%), Positives = 128/213 (60%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V+  +G  IPVTVL +   +V   +T + +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + + EFR+       L +G       F VGQ +DV G TIGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEIIVEFRIDAAKAAELKLGDTIDVDLFAVGQKIDVQGTTIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RA+HG S SH   GS G  QDPGRVF  K+M G MG    TV+NL +
Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LVKG VPGA K+ +++V  + K+
Sbjct: 181 VRVDAERKLLLVKGAVPGA-KSGFVVVSPAVKA 212


>gi|28198353|ref|NP_778667.1| 50S ribosomal protein L3 [Xylella fastidiosa Temecula1]
 gi|42559619|sp|Q87E82|RL3_XYLFT RecName: Full=50S ribosomal protein L3
 gi|212288597|sp|B2I8G9|RL3_XYLF2 RecName: Full=50S ribosomal protein L3
 gi|28056423|gb|AAO28316.1| 50S ribosomal protein L3 [Xylella fastidiosa Temecula1]
          Length = 215

 Score =  166 bits (421), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/209 (46%), Positives = 129/209 (61%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G V RK GM+ V+  +G  IPVT++     +VV  +T D +GY AVQV  G  +   V+K
Sbjct: 7   GFVGRKAGMSRVFLEDGCSIPVTLIEATANRVVQIKTSDVDGYDAVQVTVGSRRSVLVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P  G F+   V   + L+EFRV+K       VGS    S F VGQ VD+ G+T GKGF G
Sbjct: 67  PESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGFQG 126

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHNF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  + +V+NLEV+ +
Sbjct: 127 TIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVKQSVQNLEVIKI 186

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D +R LI V+G +PGA     +L+R + K
Sbjct: 187 DVERCLIAVRGAIPGASGGD-VLIRSASK 214


>gi|58583207|ref|YP_202223.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84625044|ref|YP_452416.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|81311762|sp|Q5GWT3|RL3_XANOR RecName: Full=50S ribosomal protein L3
 gi|109893572|sp|Q2NZY5|RL3_XANOM RecName: Full=50S ribosomal protein L3
 gi|212288596|sp|B2SQR0|RL3_XANOP RecName: Full=50S ribosomal protein L3
 gi|58427801|gb|AAW76838.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84368984|dbj|BAE70142.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 216

 Score =  166 bits (421), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/211 (44%), Positives = 129/211 (61%), Gaps = 4/211 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G V RK GM+ ++  +GR +PVT++     ++   +T++ +GY AVQ+  G  +   V+K
Sbjct: 8   GFVGRKAGMSRIFTEDGRSVPVTLIEATPNRIAQIKTVEVDGYSAVQITVGARRAALVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           P  G F+   V   + L+EFRV+ D  L    VG       F VGQ VDV G+T GKGF 
Sbjct: 68  PAAGHFAKAKVEAGRGLWEFRVE-DAHLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQ 126

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR+NF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  + + +NLEVV 
Sbjct: 127 GTIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVK 186

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VD +RGLI + G VPGA     ++VR + K+
Sbjct: 187 VDVERGLIAIHGAVPGAAGGD-VIVRPASKA 216


>gi|270264373|ref|ZP_06192639.1| 50S ribosomal protein L3 [Serratia odorifera 4Rx13]
 gi|270041509|gb|EFA14607.1| 50S ribosomal protein L3 [Serratia odorifera 4Rx13]
          Length = 209

 Score =  166 bits (421), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/202 (45%), Positives = 126/202 (62%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTTGSKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR+ + ++    G   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-AGQNISVEIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG +G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA   + I+
Sbjct: 182 AERNLLLVKGAVPGATGGNLIV 203


>gi|300309456|ref|YP_003773548.1| 50S ribosomal protein L3 [Herbaspirillum seropedicae SmR1]
 gi|300072241|gb|ADJ61640.1| 50S ribosomal subunit L3 protein [Herbaspirillum seropedicae SmR1]
          Length = 222

 Score =  166 bits (421), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/212 (45%), Positives = 125/212 (58%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GM  ++  +G  IPVTVL + N +V   +T + +GY AVQV  G+ +   
Sbjct: 5   MSLGLVGRKVGMMRIFTEDGDSIPVTVLDVSNNRVTQIKTPEVDGYSAVQVTFGQRRASR 64

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V K   G F+   V     L EFRV       L  G V     F  GQ VDV G++IGKG
Sbjct: 65  VVKAAAGHFAKAGVEAGTVLKEFRVDASKAAELKAGDVVGIGMFEAGQKVDVQGVSIGKG 124

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RATHG S SH   GS G  QDPGRVF  K+M G +G  + TV+NLE+
Sbjct: 125 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVKTTVQNLEI 184

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             VD +R L+LVKG VPGA KN  ++V  + K
Sbjct: 185 ARVDAERQLLLVKGAVPGA-KNGQVIVSPAVK 215


>gi|319760329|ref|YP_004124267.1| 50S ribosomal protein L3 [Candidatus Blochmannia vafer str. BVAF]
 gi|318039043|gb|ADV33593.1| 50S ribosomal protein L3 [Candidatus Blochmannia vafer str. BVAF]
          Length = 217

 Score =  166 bits (421), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 87/196 (44%), Positives = 128/196 (65%), Gaps = 1/196 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           +G++ RKLGMT ++  +G  IPVT++ +    V+  + L ++GY AVQV  G +KV  ++
Sbjct: 2   NGLIGRKLGMTRLFGEDGVSIPVTMVEVLPNHVIQIKNLKRDGYCAVQVTTGHSKVNCLN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G      V P K L+EFRV   D  + +G V +   F   + VDVTG++ GKGFSG
Sbjct: 62  KPQLGHLKKAGVKPGKGLWEFRVN-SDSTISLGDVITIEIFKNAKEVDVTGISKGKGFSG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    A+HG S+SHR+ GS G  Q PG+VFK KKMAG++G +RVTV+NL++++V
Sbjct: 121 TIKRWNFHTQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQLGNSRVTVQNLKIINV 180

Query: 183 DDKRGLILVKGCVPGA 198
           +    ++L+KG +PG 
Sbjct: 181 NLNDNVLLIKGAIPGT 196


>gi|228472276|ref|ZP_04057042.1| 50S ribosomal protein L3 [Capnocytophaga gingivalis ATCC 33624]
 gi|228276479|gb|EEK15203.1| 50S ribosomal protein L3 [Capnocytophaga gingivalis ATCC 33624]
          Length = 205

 Score =  166 bits (421), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 87/206 (42%), Positives = 130/206 (63%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP T++    C V   RT + +GY A+Q+G  + K K+ S
Sbjct: 2   SGLIGKKVGMTSIFDENGKNIPCTIIEAGPCVVTQVRTKEVDGYEALQLGFDDKKEKHTS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F+   V+PKKKL EF  Q  +    +G   +  +F  G+ VDVTG + GKGF G
Sbjct: 62  KAAAGHFAKAGVTPKKKLVEF--QGFESTYKLGDTITAEFFVEGEFVDVTGTSKGKGFQG 119

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            ++RH FGG+ ++THG     R+ GS G    P RVFK  +MAGRMG  +VTV+NL+V+ 
Sbjct: 120 VVRRHGFGGVGQSTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ LI++KGCVPG  KN+++ + 
Sbjct: 180 VIPEKNLIILKGCVPG-HKNAYVTIH 204


>gi|159039834|ref|YP_001539087.1| ribosomal protein L3 [Salinispora arenicola CNS-205]
 gi|212288411|sp|A8M529|RL3_SALAI RecName: Full=50S ribosomal protein L3
 gi|157918669|gb|ABW00097.1| ribosomal protein L3 [Salinispora arenicola CNS-205]
          Length = 219

 Score =  166 bits (421), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/204 (45%), Positives = 125/204 (61%), Gaps = 3/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+    C V   R+  K+GY AVQ+  G    + V K
Sbjct: 7   GILGAKLGMTQVWD-NNRVVPVTVVQAGPCVVSQVRSHQKDGYAAVQLAYGAIDPRKVKK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G ++  +V+P++ + E R   D     +G   +   F  G  VDVTG T GKG++G 
Sbjct: 66  PISGHYTKADVAPRRHIVELRT-TDAAEYSLGQEVTVEQFPAGISVDVTGKTKGKGYAGP 124

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GLRA+HGV   HRS GS G    PGRVFK  +MAGRMGG R TV+NL V +VD
Sbjct: 125 MKRHGFHGLRASHGVERKHRSPGSIGGCATPGRVFKGTRMAGRMGGVRYTVQNLTVQAVD 184

Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207
            +  L+LV+G +PG  K + +LVR
Sbjct: 185 TENNLLLVRGAIPGP-KGALVLVR 207


>gi|167036801|ref|YP_001664379.1| 50S ribosomal protein L3 [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|256752632|ref|ZP_05493484.1| ribosomal protein L3 [Thermoanaerobacter ethanolicus CCSD1]
 gi|320115223|ref|YP_004185382.1| 50S ribosomal protein L3 [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|226730582|sp|B0KCK0|RL3_THEP3 RecName: Full=50S ribosomal protein L3
 gi|166855635|gb|ABY94043.1| ribosomal protein L3 [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|256748452|gb|EEU61504.1| ribosomal protein L3 [Thermoanaerobacter ethanolicus CCSD1]
 gi|319928314|gb|ADV78999.1| 50S ribosomal protein L3 [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 210

 Score =  166 bits (420), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/214 (45%), Positives = 132/214 (61%), Gaps = 7/214 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ RK GMT +++ +G  IPVTV+    C VV  +T++ +GY A+QVG G+ K K 
Sbjct: 1   MKKGILGRKHGMTQIFDEKGEVIPVTVIEAGPCVVVQKKTVETDGYNAIQVGFGDVKEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           ++KP+ G F    V  K+ L EFR+   DD+    VGS      F  G  VDVTG++ GK
Sbjct: 61  LTKPLIGHFKKAGVPFKRYLREFRL---DDISGYEVGSEIKVDIFKPGDRVDVTGISKGK 117

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF+G +KR+       +HG S  HR  GS G   DPGR FK K M G MG  RVT++NLE
Sbjct: 118 GFAGVVKRYGANRGPMSHG-SKYHRRVGSMGATTDPGRTFKGKIMPGHMGHERVTIQNLE 176

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VV VD +  L+LVKG VPG  K S ++++DS KS
Sbjct: 177 VVKVDPELNLLLVKGSVPGP-KGSLLIIKDSVKS 209


>gi|240167703|ref|ZP_04746362.1| 50S ribosomal protein L3 [Mycobacterium kansasii ATCC 12478]
          Length = 217

 Score =  166 bits (420), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 126/212 (59%), Gaps = 3/212 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   R +PVTV+      V   RT +++GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP+ G +++  V+P++ L E R+   D +    VG   +   F  G  VDVTG + GKG
Sbjct: 63  TKPLTGQYTAAGVNPRRHLAELRLDDPDAVAEYEVGQELTAEIFADGSYVDVTGTSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKRH F G  A HG    HR  GS G    P RVFK  +MAGRMG +RVTV+NL V
Sbjct: 123 FAGTMKRHGFRGQGAAHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             VD + G++L+KG VPG +    ++VR + K
Sbjct: 183 HKVDAENGVLLIKGAVPG-RTGGLVMVRSAIK 213


>gi|291296991|ref|YP_003508389.1| 50S ribosomal protein L3 [Meiothermus ruber DSM 1279]
 gi|290471950|gb|ADD29369.1| ribosomal protein L3 [Meiothermus ruber DSM 1279]
          Length = 214

 Score =  166 bits (420), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/208 (45%), Positives = 127/208 (61%), Gaps = 7/208 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  K+GMT ++  + + +PVTV+    C VV  +T++K+GY AVQ+G    K + V+K
Sbjct: 3   GILGTKVGMTQIWKGD-KAVPVTVILAGPCPVVQRKTIEKDGYEAVQLGFQSQKPQRVNK 61

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G F+   V P K L E R        P G   + S F VG++VDVTG + G GF+G 
Sbjct: 62  PAKGHFAKAGVEPVKYLRELR-----GFNPEGDTVTVSIFNVGEVVDVTGTSKGHGFTGV 116

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MK+ NF G   +HG    HR  GS G R+ PGRVFK KKMAGR G  RVT++ LEVV V 
Sbjct: 117 MKKWNFAGGNDSHGAHKIHRHGGSIGNRKTPGRVFKGKKMAGRWGNERVTIQGLEVVDVL 176

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +   LILVKG VPGA   S ++VR + K
Sbjct: 177 ENENLILVKGSVPGA-NGSLVVVRQTSK 203


>gi|255530514|ref|YP_003090886.1| 50S ribosomal protein L3 [Pedobacter heparinus DSM 2366]
 gi|255343498|gb|ACU02824.1| ribosomal protein L3 [Pedobacter heparinus DSM 2366]
          Length = 205

 Score =  166 bits (420), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 88/204 (43%), Positives = 129/204 (63%), Gaps = 3/204 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++ +G+ IP TV+    C V   +T +K+GY++VQ+   EAK KN +
Sbjct: 2   SGIIGKKVGMTSIFDADGKNIPCTVIEAGPCVVTQVKTEEKDGYVSVQLSFDEAKEKNTT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
            P++G F+    +PK+KL EF  +  ++ L +G   + + F  G  VDV G + GKGF G
Sbjct: 62  MPLKGHFAKAKTTPKRKLVEF--EPFEESLNLGDTVTVNIFNEGDFVDVVGTSKGKGFQG 119

Query: 123 AMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG+   THG     R+ GS G    P RVFK  +MAGRMGG+RV V+NL+V+ 
Sbjct: 120 VVKRHGFGGVGGQTHGQHNRMRAPGSLGAASYPSRVFKGMRMAGRMGGDRVKVQNLQVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWIL 205
           V   + L++V G VPGAK +  IL
Sbjct: 180 VYADQNLVVVSGSVPGAKGSYVIL 203


>gi|145596434|ref|YP_001160731.1| ribosomal protein L3 [Salinispora tropica CNB-440]
 gi|212288412|sp|A4XBP6|RL3_SALTO RecName: Full=50S ribosomal protein L3
 gi|145305771|gb|ABP56353.1| LSU ribosomal protein L3P [Salinispora tropica CNB-440]
          Length = 219

 Score =  166 bits (420), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/204 (45%), Positives = 125/204 (61%), Gaps = 3/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+    C V   R+ +K+GY AVQ+  G    + V K
Sbjct: 7   GILGAKLGMTQVWD-NNRVVPVTVVQAGPCVVSQVRSQEKDGYAAVQLAYGAIDPRKVKK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G ++  +V+P++ + E R   D      G   +   F  G  VDVTG T GKG++G 
Sbjct: 66  PISGHYAKADVAPRRHIVELRT-TDAGEYSSGQEVTVEEFPAGISVDVTGKTKGKGYAGP 124

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GLRA+HGV   HRS GS G    PGRVFK  +MAGRMGG R TV+NL V +VD
Sbjct: 125 MKRHGFHGLRASHGVERKHRSPGSIGGCATPGRVFKGTRMAGRMGGVRYTVQNLTVQAVD 184

Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207
            +  L+LV+G +PG  K + +LVR
Sbjct: 185 TENNLLLVRGAIPGP-KGALVLVR 207


>gi|327399523|ref|YP_004340392.1| 50S ribosomal protein L3 [Hippea maritima DSM 10411]
 gi|327182152|gb|AEA34333.1| 50S ribosomal protein L3 [Hippea maritima DSM 10411]
          Length = 206

 Score =  166 bits (420), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/196 (50%), Positives = 125/196 (63%), Gaps = 3/196 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++A+KLGMT +Y +EG+ IPVTVL      +   +T +K+GY A+QVG  + K K V+K
Sbjct: 3   GLIAKKLGMTQLY-VEGKAIPVTVLEAQEGVITDIKTKEKDGYNAIQVGFIDTKEKRVTK 61

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G +  V VSPKK L EFRV  D D   V        F  G++VDV G T G+GFSG 
Sbjct: 62  PLLGVYKKVGVSPKKILKEFRVD-DVDSFEVKGEVKVDIFQKGEIVDVIGHTKGRGFSGV 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF G    HG S+ +R  GS G  + PGRV K +KM G  G  RVT+KNLEVV VD
Sbjct: 121 MKRHNFAGGPDGHG-SMFNRRVGSIGNCEFPGRVVKGRKMPGHYGNERVTIKNLEVVFVD 179

Query: 184 DKRGLILVKGCVPGAK 199
            ++ LI +KG VPG+K
Sbjct: 180 PEKKLIAIKGAVPGSK 195


>gi|300779845|ref|ZP_07089701.1| 50S ribosomal protein L3 [Corynebacterium genitalium ATCC 33030]
 gi|300533955|gb|EFK55014.1| 50S ribosomal protein L3 [Corynebacterium genitalium ATCC 33030]
          Length = 217

 Score =  166 bits (420), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 87/213 (40%), Positives = 123/213 (57%), Gaps = 2/213 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT +++ E R IPVTV+    C V   RT + +GY A+Q+  G+   +   K
Sbjct: 7   GILGRKLGMTQIFDEENRVIPVTVVEAGPCVVTQIRTEETDGYSAIQIAYGDIDPRKAKK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G +     +P++ + E R+  D     +G   + + F     VDV G T GKG++GA
Sbjct: 67  PQAGHYQKAGQNPRRHVAEIRMD-DTSAYELGQEVTVNIFDGDTFVDVAGTTKGKGYAGA 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G  A HG   +HR  GS G    PGRVFK K+MAGRMG NRVT +NL++  +D
Sbjct: 126 MKRHGFAGQGAAHGNQAAHRRVGSIGGCATPGRVFKGKRMAGRMGSNRVTTQNLKIQRID 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
               L+L+KG +PGA K S + V+ + K   + 
Sbjct: 186 GDSNLLLIKGAIPGA-KGSLVTVKTAVKGGAHA 217


>gi|71018891|ref|XP_759676.1| hypothetical protein UM03529.1 [Ustilago maydis 521]
 gi|46099434|gb|EAK84667.1| hypothetical protein UM03529.1 [Ustilago maydis 521]
          Length = 373

 Score =  166 bits (420), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/221 (47%), Positives = 134/221 (60%), Gaps = 11/221 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH----RTLDKNGYMAVQVGAGEA 56
            R G++A K GMT  +   G RIP TVL + + QV  H        ++ Y A+QV A + 
Sbjct: 91  QRVGLIAVKRGMTSFFLPNGERIPATVLQVHSNQVSAHIGFGPDATESTYTALQVAAVDT 150

Query: 57  K-VKNVSKPMRGFFSSVNVSPKKKLF-EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGM 114
           K   +V+K ++G      +   KK+  EF V   D L+P+G+  S  +F  GQ VDV  +
Sbjct: 151 KSTYHVTKQIQGHLKKAGIIKGKKIIREFPV-SSDALVPLGTQLSAVHFVPGQSVDVRAI 209

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV-T 173
           T G+GF G MKRH F GLRA+HGVSISHRSHGSTG  QDPGRV+   KMAGRMGGN+  T
Sbjct: 210 TRGRGFQGVMKRHGFHGLRASHGVSISHRSHGSTGANQDPGRVWPGTKMAGRMGGNKHGT 269

Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILV---RDSFK 211
           + NL VV VD ++ LI VKG VPG K  S  L    R S+K
Sbjct: 270 IHNLLVVRVDAEKDLIYVKGNVPGPKGGSVTLQDARRPSWK 310


>gi|315125262|ref|YP_004067265.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas sp. SM9913]
 gi|315013775|gb|ADT67113.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas sp. SM9913]
          Length = 211

 Score =  166 bits (420), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 90/198 (45%), Positives = 121/198 (61%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+     ++   ++   +GY A+QV AG  K   
Sbjct: 1   MALGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRIAQIKSDATDGYNALQVTAGTKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+   V   + L+EFR+   +    VG+  +   F     VDVTG + GKGF
Sbjct: 61  VNKATAGHFAKAGVEAGRGLWEFRLNGGEGDFEVGAELTVELFNEINKVDVTGTSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG+MG  +VT +NLE+V
Sbjct: 121 QGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNEQVTTQNLELV 180

Query: 181 SVDDKRGLILVKGCVPGA 198
            VD +R L+LVKG VPGA
Sbjct: 181 RVDAERNLLLVKGAVPGA 198


>gi|221133614|ref|ZP_03559919.1| 50S ribosomal subunit protein L3 [Glaciecola sp. HTCC2999]
          Length = 212

 Score =  166 bits (420), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/213 (44%), Positives = 129/213 (60%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+     +V   RT + +GY A+QV AG  K   
Sbjct: 1   MAIGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRVTQLRTEETDGYRALQVTAGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V     L+EFR+   + + + VGS  +   F     VDV G + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGSGLWEFRLDDSEGENIEVGSEITVELFNDTNKVDVVGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F GA+KR NF   R THG S+SHR+ GS G  Q PG+VFK KKMAG++G  RVT  +LE+
Sbjct: 121 FQGAIKRWNFSSQRMTHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQLGNKRVTTISLEL 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +  L+L+KG VPGA   S ++VR + K+
Sbjct: 181 VRVDVENNLLLIKGAVPGA-TGSDVIVRPAVKA 212


>gi|220913432|ref|YP_002488741.1| 50S ribosomal protein L3 [Arthrobacter chlorophenolicus A6]
 gi|254803650|sp|B8HD06|RL3_ARTCA RecName: Full=50S ribosomal protein L3
 gi|219860310|gb|ACL40652.1| ribosomal protein L3 [Arthrobacter chlorophenolicus A6]
          Length = 216

 Score =  166 bits (420), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 90/210 (42%), Positives = 124/210 (59%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   + IPVTV+  D+  +   R  + +GY+AVQ+G G+   + V+K
Sbjct: 9   GLLGTKLGMTQVWDENNKLIPVTVVQADSNVITQLRNAEVDGYVAVQIGYGQIDPRKVTK 68

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+P++ + E R   D     +G   S   F  GQ +DV G T GKGF+G 
Sbjct: 69  PLAGHFEKAGVTPRRHVVELRT-ADAAEYELGQELSVELFAAGQKIDVIGTTKGKGFAGV 127

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G+ A+HG   +HR  GS G    P RVFK  KMAGRMG  R T  NL V +VD
Sbjct: 128 MKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGMKMAGRMGAVRHTTLNLTVHAVD 187

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++ L+L+KG VPGA +   + VR + K A
Sbjct: 188 AEKSLLLIKGAVPGA-RGQVVFVRTAVKGA 216


>gi|239980056|ref|ZP_04702580.1| 50S ribosomal protein L3 [Streptomyces albus J1074]
          Length = 200

 Score =  166 bits (419), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/202 (46%), Positives = 121/202 (59%), Gaps = 2/202 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V++   R +PVTV+      V   RT D +GY AVQ+  GE   + V+KP++G F+ 
Sbjct: 1   MTQVWDENNRVVPVTVVKAGANVVTQVRTNDTDGYEAVQIAFGEIDPRKVNKPLKGHFAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
            +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNF G
Sbjct: 61  ADVTPRRHLVEIRTA-DASEYTLGQELNADTFEAGLKVDVTGKSKGKGFAGVMKRHNFKG 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
           L A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +VD ++GL+L+
Sbjct: 120 LGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVDAEKGLLLI 179

Query: 192 KGCVPGAKKNSWILVRDSFKSA 213
           KG VPG      +LVR + K A
Sbjct: 180 KGAVPGP-NGGLVLVRTAAKGA 200


>gi|220906719|ref|YP_002482030.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 7425]
 gi|254803669|sp|B8HMQ4|RL3_CYAP4 RecName: Full=50S ribosomal protein L3
 gi|219863330|gb|ACL43669.1| ribosomal protein L3 [Cyanothece sp. PCC 7425]
          Length = 212

 Score =  166 bits (419), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 86/197 (43%), Positives = 120/197 (60%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT +++ E R IPVTV+    C +   +T   +GY A+QV  GE + K+
Sbjct: 1   MAVGILGTKLGMTQIFDQERRAIPVTVVQAGPCPITQIKTKQTDGYAAIQVAFGEVRAKS 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SK   G  +  N +P + L E+R  + D    VG V     F+ GQ+VDVTG +IG+GF
Sbjct: 61  LSKAELGHLAKSNTAPMRHLHEYRTGEVDQFQ-VGQVLKADLFSAGQVVDVTGTSIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRHNF      HG S +HR  GSTG    PGRV+  K+MAG++G  R T++ L +V
Sbjct: 120 AGYQKRHNFKRGPMAHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGQLGSARTTIRQLTIV 178

Query: 181 SVDDKRGLILVKGCVPG 197
            VD +R L+L+KG VPG
Sbjct: 179 RVDPERNLVLIKGAVPG 195


>gi|21223082|ref|NP_628861.1| 50S ribosomal protein L3 [Streptomyces coelicolor A3(2)]
 gi|256785823|ref|ZP_05524254.1| 50S ribosomal protein L3 [Streptomyces lividans TK24]
 gi|289769715|ref|ZP_06529093.1| 50S ribosomal protein L3 [Streptomyces lividans TK24]
 gi|42559700|sp|Q9L0E0|RL3_STRCO RecName: Full=50S ribosomal protein L3
 gi|7321292|emb|CAB82070.1| 50S ribosomal protein L3 [Streptomyces coelicolor A3(2)]
 gi|289699914|gb|EFD67343.1| 50S ribosomal protein L3 [Streptomyces lividans TK24]
          Length = 214

 Score =  166 bits (419), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 92/210 (43%), Positives = 126/210 (60%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+K
Sbjct: 7   GILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+  +V+P++ L E R     +   +G   +   F  G  VDVT  + GKGF+G 
Sbjct: 67  PLKGHFAKADVTPRRHLVEIRTAAASEYT-LGQEITAEAFESGVKVDVTAKSKGKGFAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF G +A+HG    HR  GS G    PGRVFK  +MAGRMG  RVT +NL V +VD
Sbjct: 126 MKRHNFKGGKASHGAHRVHRMPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTVHAVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++GL+L+KG VPG      +LVR + K A
Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214


>gi|167767803|ref|ZP_02439856.1| hypothetical protein CLOSS21_02338 [Clostridium sp. SS2/1]
 gi|317497095|ref|ZP_07955422.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167710542|gb|EDS21121.1| hypothetical protein CLOSS21_02338 [Clostridium sp. SS2/1]
 gi|291558860|emb|CBL37660.1| LSU ribosomal protein L3P [butyrate-producing bacterium SSC/2]
 gi|316895640|gb|EFV17795.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 209

 Score =  166 bits (419), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 88/212 (41%), Positives = 127/212 (59%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++  K+GMT ++N +G   PVTVL    C V   +T + +GY AVQVG  + K K 
Sbjct: 1   MKKAILTTKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTEENDGYSAVQVGFVDKKEKG 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G F    V+PK+ + EFR +  ++   VG       F  G  +D T  + GKG+
Sbjct: 61  INKPQKGHFDKAGVAPKRFVREFRFENAEEYT-VGQEIKADIFAAGDKIDATATSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH      + HG S  HR  GS G   DP +VFK KKM G+MG  RVT++NLE+V
Sbjct: 120 AGGIKRHGLKSGPSAHG-SKYHRHAGSNGMASDPSKVFKGKKMPGQMGAERVTIQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  + +ILVKG VPG KK S +++++S K+
Sbjct: 179 KVDADQNIILVKGAVPGPKK-SLVMLKESVKA 209


>gi|124003662|ref|ZP_01688510.1| ribosomal protein L3 [Microscilla marina ATCC 23134]
 gi|123990717|gb|EAY30184.1| ribosomal protein L3 [Microscilla marina ATCC 23134]
          Length = 208

 Score =  166 bits (419), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 93/212 (43%), Positives = 128/212 (60%), Gaps = 13/212 (6%)

Query: 3   SGVVARKLGMTCVYNIEG---RRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           SG++ +K+GMT +Y+ EG   ++IP T++    C V   +T   +GY A+QVG  + K K
Sbjct: 2   SGLIGKKIGMTSIYSAEGTVAKQIPCTLIQAGPCVVTQVKTTKNDGYEAIQVGFDDKKEK 61

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL---LPVGSVFSPSYFTVGQLVDVTGMTI 116
           N  KP++G F+  N +PK+KL EF+  KD +L   + VG VF       G  VDV G + 
Sbjct: 62  NTPKPLQGHFNKANTTPKRKLVEFQFNKDVELGQEITVGDVFEE-----GDFVDVVGTSK 116

Query: 117 GKGFSGAMKRHNFGGLR-ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
           GKGF G +KRH F G+  ATHG     R  GS G    P RVFK  KMAGR G  RV ++
Sbjct: 117 GKGFQGVVKRHGFHGVGGATHGQHNRQRHPGSIGAASYPARVFKGLKMAGRTGNKRVKIQ 176

Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVR 207
           NL +V +  ++ LILV G VPGA KNS++++ 
Sbjct: 177 NLRIVKIYPEQNLILVSGSVPGA-KNSYVIIE 207


>gi|120596989|ref|YP_961563.1| 50S ribosomal protein L3 [Shewanella sp. W3-18-1]
 gi|146294841|ref|YP_001185265.1| 50S ribosomal protein L3 [Shewanella putrefaciens CN-32]
 gi|166234594|sp|A4YBY3|RL3_SHEPC RecName: Full=50S ribosomal protein L3
 gi|166234596|sp|A1REB4|RL3_SHESW RecName: Full=50S ribosomal protein L3
 gi|120557082|gb|ABM23009.1| LSU ribosomal protein L3P [Shewanella sp. W3-18-1]
 gi|145566531|gb|ABP77466.1| LSU ribosomal protein L3P [Shewanella putrefaciens CN-32]
 gi|319424580|gb|ADV52654.1| 50S ribosomal protein L3 [Shewanella putrefaciens 200]
          Length = 212

 Score =  166 bits (419), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 91/206 (44%), Positives = 126/206 (61%), Gaps = 1/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  IPVTV+ +   +V   +TL+ +GY A+QV  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFTEDGVSIPVTVIEVAGNRVTQVKTLETDGYRALQVTTGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++KP  G F+   V   + L+E R++  + + + VG+  +   F     VDVTG + GKG
Sbjct: 61  ITKPEAGHFAKSGVEAGRGLWEVRLEDGEGEGIEVGAELNVDIFADVAKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF     THG S+SHRS+GS G  Q PGRVFK KKM+G MG  RVT +NL V
Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLVV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205
           V VD +R L+LV+G VPGA     I+
Sbjct: 181 VRVDVERNLLLVRGAVPGATNGDLII 206


>gi|227494545|ref|ZP_03924861.1| ribosomal protein L3 [Actinomyces coleocanis DSM 15436]
 gi|226832279|gb|EEH64662.1| ribosomal protein L3 [Actinomyces coleocanis DSM 15436]
          Length = 221

 Score =  166 bits (419), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 95/209 (45%), Positives = 132/209 (63%), Gaps = 2/209 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RKLGMT V++ +GR +PVTV+ +    V   RT + +GY A Q+G GE   + ++KP
Sbjct: 15  LLGRKLGMTQVWDNDGRVVPVTVVQVGTNVVTQVRTEEVDGYTAAQIGFGEVDARRITKP 74

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + G F    V+P++ L E R   D D   +G     S F  G  VDV+G + GKGF+GAM
Sbjct: 75  LAGHFEKAGVAPRRHLVEVRTS-DVDAFELGQELLASVFEAGDKVDVSGKSKGKGFAGAM 133

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH F G  A+HG   +HR  GS G    PGRVFK  +MAGRMG  R TV+NL++ +VD 
Sbjct: 134 KRHGFRGAPASHGAHRNHRKPGSIGACATPGRVFKGVRMAGRMGNVRRTVQNLDIHAVDV 193

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           ++GL+L+ G +PG  KN+ +LVR+S K A
Sbjct: 194 EKGLLLIHGAIPGP-KNAVVLVRNSVKGA 221


>gi|188996239|ref|YP_001930490.1| ribosomal protein L3 [Sulfurihydrogenibium sp. YO3AOP1]
 gi|226730578|sp|B2V7L3|RL3_SULSY RecName: Full=50S ribosomal protein L3
 gi|188931306|gb|ACD65936.1| ribosomal protein L3 [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 226

 Score =  166 bits (419), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 89/209 (42%), Positives = 127/209 (60%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+ + G+ IPVTV+    C V   RT +K+GY AV +  GE K KN
Sbjct: 1   MPKGIIGKKIGMTKVF-VNGKAIPVTVIQAGPCYVAYTRTQEKDGYNAVALTFGERKEKN 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + KP+   F   N+ P K + EF ++  + + P   +   + F  G LVD+TG + G+GF
Sbjct: 60  IPKPLLAIFKKANIKPAKVIKEFPLKDGETVEPGQEIRIENVFEKGDLVDITGKSKGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +  MKR +F G   +HG    HR+ GS GCR +PGRV+K K+MAG  G   VTV  LEVV
Sbjct: 120 TSVMKRWDFAGFPKSHGHRY-HRAVGSIGCRTEPGRVWKTKRMAGHYGNETVTVLGLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            +  ++ +ILVKG VPGA  NS + ++ S
Sbjct: 179 DIIPEKNVILVKGSVPGA-PNSTVFLKQS 206


>gi|320529796|ref|ZP_08030873.1| 50S ribosomal protein L3 [Selenomonas artemidis F0399]
 gi|320137814|gb|EFW29719.1| 50S ribosomal protein L3 [Selenomonas artemidis F0399]
          Length = 220

 Score =  166 bits (419), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/215 (45%), Positives = 130/215 (60%), Gaps = 5/215 (2%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RKLGMT ++  EGR +PVTV+   N  V+ ++T + +GY AVQ+G G+ K KNV+KP
Sbjct: 8   ILGRKLGMTQIFTEEGRVVPVTVVESGNNLVLRNKTNETDGYNAVQIGFGDVKEKNVTKP 67

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           ++G F    V   + + E R+        VG       F  G LVDV G + GKGF+G +
Sbjct: 68  LKGQFEKAGVKAVRFIREMRLSAPSK-YNVGDTIGVDIFAEGDLVDVVGTSKGKGFAGGI 126

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCR-QDP-GRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           KRHNF      HG S SHR  GSTG     P GRV K KK+ GRMGG RVTV+ L VV V
Sbjct: 127 KRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLTVVRV 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           D  R LIL+KG +PG KK  +++++D+ K A   K
Sbjct: 186 DTDRNLILIKGAIPGPKK-GFVVIKDTVKPAKAAK 219


>gi|126176355|ref|YP_001052504.1| 50S ribosomal protein L3 [Shewanella baltica OS155]
 gi|152998749|ref|YP_001364430.1| 50S ribosomal protein L3 [Shewanella baltica OS185]
 gi|160873326|ref|YP_001552642.1| 50S ribosomal protein L3 [Shewanella baltica OS195]
 gi|217975201|ref|YP_002359952.1| 50S ribosomal protein L3 [Shewanella baltica OS223]
 gi|304412765|ref|ZP_07394367.1| 50S ribosomal protein L3 [Shewanella baltica OS183]
 gi|307307429|ref|ZP_07587164.1| 50S ribosomal protein L3 [Shewanella baltica BA175]
 gi|166234591|sp|A3DA72|RL3_SHEB5 RecName: Full=50S ribosomal protein L3
 gi|166234592|sp|A6WHS8|RL3_SHEB8 RecName: Full=50S ribosomal protein L3
 gi|189029479|sp|A9KWA2|RL3_SHEB9 RecName: Full=50S ribosomal protein L3
 gi|254803689|sp|B8EBK5|RL3_SHEB2 RecName: Full=50S ribosomal protein L3
 gi|125999560|gb|ABN63635.1| LSU ribosomal protein L3P [Shewanella baltica OS155]
 gi|151363367|gb|ABS06367.1| ribosomal protein L3 [Shewanella baltica OS185]
 gi|160858848|gb|ABX47382.1| ribosomal protein L3 [Shewanella baltica OS195]
 gi|217500336|gb|ACK48529.1| ribosomal protein L3 [Shewanella baltica OS223]
 gi|304348845|gb|EFM13261.1| 50S ribosomal protein L3 [Shewanella baltica OS183]
 gi|306910217|gb|EFN40650.1| 50S ribosomal protein L3 [Shewanella baltica BA175]
 gi|315265553|gb|ADT92406.1| 50S ribosomal protein L3 [Shewanella baltica OS678]
          Length = 212

 Score =  166 bits (419), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 92/206 (44%), Positives = 125/206 (60%), Gaps = 1/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  IPVTV+ +   +V   +TL+ +GY A+QV  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFTEDGVSIPVTVIEVAGNRVTQVKTLETDGYRALQVTTGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFR-VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++KP  G F+   V   + L+E R V  + + + VG+  +   F     VDVTG + GKG
Sbjct: 61  ITKPEAGHFAKSGVEAGRGLWEMRLVDGEGEGIEVGAELNVDIFADVAKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF     THG S+SHRS+GS G  Q PGRVFK KKM+G MG  RVT +NL V
Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLVV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205
           V VD +R L+LV+G VPGA     I+
Sbjct: 181 VRVDVERNLLLVRGAVPGATNGDLII 206


>gi|320451300|ref|YP_004203396.1| 50S ribosomal protein L3 [Thermus scotoductus SA-01]
 gi|320151469|gb|ADW22847.1| 50S ribosomal protein L3 [Thermus scotoductus SA-01]
          Length = 206

 Score =  166 bits (419), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/210 (46%), Positives = 124/210 (59%), Gaps = 7/210 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  K+GMT +Y  E R +PVTV+    C VV  RT +K+GY AVQ+G      K V++
Sbjct: 3   GILGMKVGMTRIYR-EDRAVPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLPQNPKRVNR 61

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           PM+G F+   V P + L E R     D  P G V +   F  G+ VDVTG + G+G +G 
Sbjct: 62  PMKGHFARAGVGPVRILKEIR-----DFNPEGDVVTVEIFKAGERVDVTGTSKGRGTAGV 116

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR NF G   +HG    HR  GS G R+ PGRV+K KKMAGR G  RVTV NLEVV V 
Sbjct: 117 MKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGRYGAERVTVMNLEVVDVI 176

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +  L+LVKG VPG      +LVR + K A
Sbjct: 177 PEENLLLVKGAVPGP-NGGLVLVRQTKKVA 205


>gi|237736170|ref|ZP_04566651.1| LSU ribosomal protein L3P [Fusobacterium mortiferum ATCC 9817]
 gi|229421723|gb|EEO36770.1| LSU ribosomal protein L3P [Fusobacterium mortiferum ATCC 9817]
          Length = 208

 Score =  166 bits (419), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 92/209 (44%), Positives = 134/209 (64%), Gaps = 3/209 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++A+K+GMT ++  +G+ IPVTV+      V+  +T++ +GY A+Q+G  E K KN +
Sbjct: 2   SGILAKKIGMTQIFE-DGKFIPVTVVEAGPNFVLQKKTVENDGYTALQLGFDEKKEKNTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    V+P++ + E RV   +    +G           + VD+TG + GKG SG
Sbjct: 61  KPVMGIFKKAGVNPQRFVKELRVDSVEGY-ELGQEIKVDVLAGVEFVDITGTSKGKGTSG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGG RA+HGVS +HR  GS G    PG+V K K+MAG+ G   VTV+NL+VV V
Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSTWPGKVLKGKRMAGQYGNETVTVQNLKVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D +  L+L+KG VPG+ KNS+I+V+ + K
Sbjct: 180 DAENNLLLIKGAVPGS-KNSYIVVKPAVK 207


>gi|282899952|ref|ZP_06307913.1| Ribosomal protein L3 [Cylindrospermopsis raciborskii CS-505]
 gi|281195222|gb|EFA70158.1| Ribosomal protein L3 [Cylindrospermopsis raciborskii CS-505]
          Length = 212

 Score =  166 bits (419), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 89/197 (45%), Positives = 122/197 (61%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT +++  G  IPVTV+    C V   +T   +GY A+QVG GE K K 
Sbjct: 1   MSVGILGTKLGMTQIFDEAGVSIPVTVIQAGPCTVTQVKTQPTDGYCAIQVGYGEVKPKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP  G  +  +  P + L E+R     D   +G       F+VGQ+VDV G +IG+GF
Sbjct: 61  LNKPKLGHLAKSSAGPVRYLNEYRTDAAGDYA-LGQEIKADIFSVGQIVDVIGTSIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KR+NFG    +HG S +HR+ GS G    PGRV+  K+MAGR+GG+RVTV+ L VV
Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGSRVTVRKLTVV 178

Query: 181 SVDDKRGLILVKGCVPG 197
            VD +R LIL+KG +PG
Sbjct: 179 KVDAERNLILIKGAIPG 195


>gi|94987402|ref|YP_595335.1| 50S ribosomal protein L3 [Lawsonia intracellularis PHE/MN1-00]
 gi|123385030|sp|Q1MPR3|RL3_LAWIP RecName: Full=50S ribosomal protein L3
 gi|94731651|emb|CAJ55014.1| 50S ribosomal protein L3 [Lawsonia intracellularis PHE/MN1-00]
          Length = 210

 Score =  166 bits (419), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 90/203 (44%), Positives = 126/203 (62%), Gaps = 1/203 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT V+   G  +PVTV+    C +V  +T++K GY A+Q+  GE K K+VSK
Sbjct: 6   GILGQKLGMTQVFGGNGFAVPVTVVQAGPCPIVQIKTVEKEGYNALQIAFGEGKKKHVSK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
            M+G FS   +S  +K+ E R++       VG V +   F+VG  V +TG +IGKGF GA
Sbjct: 66  SMQGHFSKAGLSLYRKIQEVRLKGSLTSYEVGQVLTVGLFSVGDKVKITGKSIGKGFQGA 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           M+R NF G + +HG    HR+ GS G    PG VFK KKMAG  G  +VTV+NL VV + 
Sbjct: 126 MRRWNFAGSKDSHGCEKVHRAAGSIGNNTFPGHVFKGKKMAGHWGTEKVTVQNLVVVDIR 185

Query: 184 DKRGLILVKGCVPGAKKNSWILV 206
            +  +IL+ G VPG  KNS++ +
Sbjct: 186 PEDNIILIHGSVPGP-KNSFLFI 207


>gi|212288599|sp|A2SLF7|RL3_METPP RecName: Full=50S ribosomal protein L3
          Length = 226

 Score =  166 bits (419), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 96/217 (44%), Positives = 127/217 (58%), Gaps = 14/217 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ RK+GM  ++  +G  +PVTVL + N +V   +T++ +GY A+QV  G  K   V
Sbjct: 9   RLGLLGRKVGMMRIFTDDGDAVPVTVLDVSNNRVTQVKTVETDGYSAIQVTFGARKASRV 68

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQ-------KDDDLLPVGSVFSPSYFTVGQLVDVTGM 114
           +KP  G  +   V   + L EF V        K    LPVG       F  GQ VDV G 
Sbjct: 69  TKPEAGHLAKAGVEAGEILREFAVSAEVAAEYKPGGTLPVG------LFAAGQKVDVQGT 122

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           +IGKGF+G +KRHNFG  RA+HG S SH   GS    QDPGRVF  KKM+G  G    T 
Sbjct: 123 SIGKGFTGTIKRHNFGSQRASHGNSRSHNVPGSISMAQDPGRVFPGKKMSGHRGDVTKTT 182

Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +NL++V VD+ R L+LV+G VPGA KN ++ VR + K
Sbjct: 183 QNLDIVRVDEARQLLLVRGAVPGA-KNGFVTVRPAVK 218


>gi|297170808|gb|ADI21828.1| ribosomal protein L3 [uncultured gamma proteobacterium
           HF0130_25M15]
          Length = 305

 Score =  166 bits (419), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 91/211 (43%), Positives = 133/211 (63%), Gaps = 4/211 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K GMT V+  +GR +PVT++  +   +   +T   +GY A+QV  G+   KN  K
Sbjct: 3   GIVGKKCGMTRVFTDDGRSVPVTIVQANPNLINRIKTEATDGYDAIQVLTGQT-TKNPKK 61

Query: 64  PMRGFF-SSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           P  G   ++ N     KL EFR+  ++ + +  G   +  YF  G+LVDV+G +IGKG++
Sbjct: 62  PDSGQIKTNPNEKLSHKLHEFRLNANELEQVDTGKEITVDYFEKGELVDVSGNSIGKGYA 121

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNF    ATHG S++HR+ GS G  Q PGRVFK KKMAGRMG  + T++NLEV+ 
Sbjct: 122 GVIKRHNFKTQDATHGNSLAHRAPGSIGQNQTPGRVFKGKKMAGRMGNVKKTMQNLEVID 181

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +D  R LI +KG + G  +NS++++  S KS
Sbjct: 182 IDSDRNLIFIKGSIAG-HENSFVVITPSIKS 211


>gi|326799127|ref|YP_004316946.1| 50S ribosomal protein L3 [Sphingobacterium sp. 21]
 gi|326549891|gb|ADZ78276.1| 50S ribosomal protein L3 [Sphingobacterium sp. 21]
          Length = 205

 Score =  166 bits (419), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 88/205 (42%), Positives = 128/205 (62%), Gaps = 4/205 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++ EG+ IP TV+    C V   RT++ +GY A+Q+   E K KN +
Sbjct: 2   SGIIGKKVGMTSIFDAEGKNIPCTVIEAGPCVVTQIRTVENDGYTAIQLAFDEKKEKNTT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
             ++G F+  N +PK+KL EF V  ++  L  G V +   F  G  +DV G + GKGF G
Sbjct: 62  ASLKGHFAKANTTPKRKLVEFEVFPEEKNL--GDVVTVDIFAEGDYIDVVGTSKGKGFQG 119

Query: 123 AMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG+   THG     R+ GS G    P RVFK  +MAGR GG+RV V+NL+V+ 
Sbjct: 120 VVKRHGFGGVGGQTHGQHNRMRAPGSLGASSWPSRVFKGMRMAGRTGGDRVKVQNLQVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           V  ++ L++V G VPGA K S+++V
Sbjct: 180 VYPEKNLLVVSGSVPGA-KGSYVIV 203


>gi|119468280|ref|ZP_01611406.1| 50S ribosomal subunit protein L3 [Alteromonadales bacterium TW-7]
 gi|119448273|gb|EAW29537.1| 50S ribosomal subunit protein L3 [Alteromonadales bacterium TW-7]
          Length = 211

 Score =  165 bits (418), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 90/198 (45%), Positives = 120/198 (60%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+     ++   ++   +GY A+QV AG  K   
Sbjct: 1   MALGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRIAQIKSDATDGYNALQVTAGTKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+   V   + L+EFR+   +    VG+  +   F     VDVTG + GKGF
Sbjct: 61  VNKASAGHFAKAGVEAGRGLWEFRLNGGEGDFEVGAELTVELFNEINKVDVTGTSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG MG  RVT +NLE+V
Sbjct: 121 QGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGHMGAERVTTQNLELV 180

Query: 181 SVDDKRGLILVKGCVPGA 198
            VD +R L+LVKG VPG+
Sbjct: 181 RVDAERNLLLVKGAVPGS 198


>gi|2344833|emb|CAB11435.1| ribosomal protein L3 [Mycobacterium leprae]
          Length = 217

 Score =  165 bits (418), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 93/212 (43%), Positives = 125/212 (58%), Gaps = 3/212 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   R +PVTV+      V   RTL+ +GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTLEPDGYSAVQLAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP+ G ++S  V+P++ L E R+   D      VG   +   F     VDVTG + GKG
Sbjct: 63  NKPVTGQYNSAGVNPRRYLAELRLDHPDAAAEYEVGQELTAEIFADATYVDVTGTSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG MKRH F G  A+HG    HR  GS G    P RVFK  +MAGRMG +RVTV+NL V
Sbjct: 123 FSGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             VD + G++L+KG VPG +    ++VR + K
Sbjct: 183 HKVDTENGVLLIKGAVPG-RTGGLVMVRSAIK 213


>gi|291521898|emb|CBK80191.1| 50S ribosomal protein L3, bacterial [Coprococcus catus GD/7]
          Length = 209

 Score =  165 bits (418), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 96/212 (45%), Positives = 129/212 (60%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++  K+GMT V++ +G   PVTVL    C V   +T++ +GY AVQVG G+ + K 
Sbjct: 1   MKKAILTTKVGMTQVFSEDGVLTPVTVLQAGPCVVTQVKTVENDGYSAVQVGFGDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G F+   V+ K+ L EFR++ D +   +G       F  G  VD T  + GKGF
Sbjct: 61  VNKPKKGHFAKAGVTAKRFLKEFRLE-DAESYTLGQEIKADVFVAGDKVDATAKSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    PGRVFK K M G MG  RVTV+NLEVV
Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGSATTPGRVFKGKHMPGHMGAVRVTVQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           SVD ++ LILVKG VPG KK S +++++S K+
Sbjct: 179 SVDAEKNLILVKGAVPGPKK-SLVMLKESVKA 209


>gi|227499195|ref|ZP_03929330.1| 50S ribosomal protein L3 [Acidaminococcus sp. D21]
 gi|226904642|gb|EEH90560.1| 50S ribosomal protein L3 [Acidaminococcus sp. D21]
          Length = 219

 Score =  165 bits (418), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 91/216 (42%), Positives = 134/216 (62%), Gaps = 5/216 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT ++  +G  +PVTV+    C V+ ++T + +GY A+Q+G G+ K K+
Sbjct: 1   MARGILGKKLGMTQIFEADGTLVPVTVVEAGPCVVLANKTEETDGYNAIQLGFGDIKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+GFF    V+P K + EFR+ +  +   VG   +   F  G LVD  G++ GKGF
Sbjct: 61  VNKPMKGFFDKAGVAPVKFVREFRLAEASE-YKVGDKIAADIFAAGDLVDAIGVSRGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTG-CRQDP-GRVFKNKKMAGRMGGNRVTVKNLE 178
           +G ++RHNF      HG S SHR  GS G     P GRV K KK+ GR+GG   TV+ L 
Sbjct: 120 AGTIERHNFARGPMKHG-SKSHREPGSNGPMHSGPGGRVIKGKKLPGRLGGQSATVQRLT 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           +  VD +R LI+VKG VPGA   +++++RD+ +  V
Sbjct: 179 IAKVDAERNLIMVKGSVPGA-AGTFLMLRDTVRPVV 213


>gi|113869431|ref|YP_727920.1| 50S ribosomal protein L3 [Ralstonia eutropha H16]
 gi|194291022|ref|YP_002006929.1| 50S ribosomal protein l3 [Cupriavidus taiwanensis LMG 19424]
 gi|123133539|sp|Q0K619|RL3_RALEH RecName: Full=50S ribosomal protein L3
 gi|226725158|sp|B3R7S3|RL3_CUPTR RecName: Full=50S ribosomal protein L3
 gi|113528207|emb|CAJ94552.1| LSU ribosomal protein L3 [Ralstonia eutropha H16]
 gi|193224857|emb|CAQ70868.1| 50S ribosomal subunit protein L3 [Cupriavidus taiwanensis LMG
           19424]
          Length = 216

 Score =  165 bits (418), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+ + + +V   +T + +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTDDGEAIPVTVVEVGDNRVTQIKTDETDGYTAVQVTFGARRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + + EFR+       L  G   S   F VGQ +DV G+TIGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEIIREFRIDAAKAAELQAGGSLSVDLFEVGQKIDVQGVTIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR++F   RATHG S SH   GS G  QDPGRVF  K+M G +G    TV+NLE+
Sbjct: 121 YAGTIKRYHFASGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTRTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
             +D +R L+LVKG +PG+ KN  ++V  + K+
Sbjct: 181 AKIDAERKLLLVKGAIPGS-KNGKVIVTPAVKA 212


>gi|71842315|ref|YP_277403.1| ribosomal protein L3 [Emiliania huxleyi]
 gi|109893084|sp|Q4G364|RK3_EMIHU RecName: Full=50S ribosomal protein L3, chloroplastic
 gi|52547746|gb|AAU81908.1| ribosomal protein L3 [Emiliania huxleyi]
 gi|60101558|gb|AAX13902.1| ribosomal protein L3 [Emiliania huxleyi]
          Length = 207

 Score =  165 bits (418), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 87/201 (43%), Positives = 125/201 (62%), Gaps = 2/201 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M +G+  RK+GMT +++ +G  IPVT++  D CQV   +T   +GY A+QVG  E K+  
Sbjct: 1   MTAGIFGRKIGMTQIFDKDGSAIPVTLVKADPCQVCQIKTTKTDGYDAIQVGYLEEKLSK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SKP++G       +  +K  EFRV+ D +   +G   + S F+VGQ V VTG +IGKGF
Sbjct: 61  ISKPIQGHLQKCGSTGYRKFGEFRVE-DPETYNLGDQITTSAFSVGQKVRVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRHNF     THG S +HR  GS G    PGRV+  KKMAG +G  + T+KN E++
Sbjct: 120 AGNQKRHNFSRGPMTHG-SKNHRLPGSIGAGSTPGRVYPGKKMAGHLGNTKTTIKNSEIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKN 201
            V +K  ++++KG +PG  KN
Sbjct: 179 FVSEKENILILKGSLPGKAKN 199


>gi|83748149|ref|ZP_00945176.1| LSU ribosomal protein L3P [Ralstonia solanacearum UW551]
 gi|83725117|gb|EAP72268.1| LSU ribosomal protein L3P [Ralstonia solanacearum UW551]
          Length = 220

 Score =  165 bits (418), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 93/213 (43%), Positives = 128/213 (60%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V+  +G  IPVTVL +   +V   +T + +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + + EFR+       L +G       F+ GQ +DV G TIGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEIIAEFRIDAAKAAELKLGDTIDVDLFSAGQKIDVQGTTIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RA+HG S SH   GS G  QDPGRVF  K+M G MG    TV+NL +
Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LVKG VPGA K+ +++V  + K+
Sbjct: 181 VRVDAERKLLLVKGAVPGA-KSGFVVVSPAVKA 212


>gi|257054470|ref|YP_003132302.1| 50S ribosomal protein L3P [Saccharomonospora viridis DSM 43017]
 gi|256584342|gb|ACU95475.1| LSU ribosomal protein L3P [Saccharomonospora viridis DSM 43017]
          Length = 213

 Score =  165 bits (418), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 92/212 (43%), Positives = 123/212 (58%), Gaps = 2/212 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      V   R+ +K+GY AVQ+  G    + V+K
Sbjct: 3   GILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQVRSKEKDGYSAVQLAFGNIDPRRVNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ L E R   D D   VG   +   F+ G +VDVTG + GKGF+G 
Sbjct: 63  PQAGHFEKAGVTPRRYLAELRTS-DADSYEVGQEITADVFSDGAVVDVTGTSKGKGFAGV 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G  A+HG   +HR+ GS G    PGRVFK K+MAGR G  RVT + L + SV 
Sbjct: 122 MKRHGFAGQGASHGNQATHRAPGSIGGAATPGRVFKGKRMAGRAGNKRVTTQGLTIHSVR 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            + GL+L+KG VPG  K   + VR + K  V 
Sbjct: 182 AEEGLLLIKGAVPG-PKGGLVFVRSAAKGGVT 212


>gi|124268627|ref|YP_001022631.1| 50S ribosomal protein L3 [Methylibium petroleiphilum PM1]
 gi|124261402|gb|ABM96396.1| LSU ribosomal protein L3P [Methylibium petroleiphilum PM1]
          Length = 247

 Score =  165 bits (418), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 96/217 (44%), Positives = 127/217 (58%), Gaps = 14/217 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ RK+GM  ++  +G  +PVTVL + N +V   +T++ +GY A+QV  G  K   V
Sbjct: 30  RLGLLGRKVGMMRIFTDDGDAVPVTVLDVSNNRVTQVKTVETDGYSAIQVTFGARKASRV 89

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQ-------KDDDLLPVGSVFSPSYFTVGQLVDVTGM 114
           +KP  G  +   V   + L EF V        K    LPVG       F  GQ VDV G 
Sbjct: 90  TKPEAGHLAKAGVEAGEILREFAVSAEVAAEYKPGGTLPVG------LFAAGQKVDVQGT 143

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           +IGKGF+G +KRHNFG  RA+HG S SH   GS    QDPGRVF  KKM+G  G    T 
Sbjct: 144 SIGKGFTGTIKRHNFGSQRASHGNSRSHNVPGSISMAQDPGRVFPGKKMSGHRGDVTKTT 203

Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +NL++V VD+ R L+LV+G VPGA KN ++ VR + K
Sbjct: 204 QNLDIVRVDEARQLLLVRGAVPGA-KNGFVTVRPAVK 239


>gi|239918199|ref|YP_002957757.1| LSU ribosomal protein L3P [Micrococcus luteus NCTC 2665]
 gi|281415610|ref|ZP_06247352.1| 50S ribosomal protein L3 [Micrococcus luteus NCTC 2665]
 gi|239839406|gb|ACS31203.1| LSU ribosomal protein L3P [Micrococcus luteus NCTC 2665]
          Length = 216

 Score =  165 bits (418), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 90/210 (42%), Positives = 124/210 (59%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++ + + IPVTV+  D   V   R+ + +GY AVQ+  G+   + V+K
Sbjct: 9   GLLGTKLGMTQVWDEDNKLIPVTVVKADPNVVTQLRSEETDGYTAVQIAYGQIDPRRVTK 68

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+P++ L E R   D     +G   +   F  GQ VDV G T GKGF+GA
Sbjct: 69  PLAGHFEKAGVTPRRHLVELRT-ADAAEYSLGQDVTVEVFEAGQKVDVVGTTKGKGFAGA 127

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G+ A+HG   +HR  GS G    PGRVFK ++M GRMG  R T  NL +  +D
Sbjct: 128 MKRHGFAGVGASHGAHKNHRKPGSVGGASTPGRVFKGQRMPGRMGAVRQTTMNLTLHGID 187

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +  L+L+KG VPG+ K   +LVR + K A
Sbjct: 188 VENNLLLIKGAVPGS-KGQVVLVRSAVKGA 216


>gi|289706533|ref|ZP_06502883.1| 50S ribosomal protein L3 [Micrococcus luteus SK58]
 gi|289556668|gb|EFD50009.1| 50S ribosomal protein L3 [Micrococcus luteus SK58]
          Length = 216

 Score =  165 bits (418), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 90/210 (42%), Positives = 124/210 (59%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++ + + IPVTV+  D   V   R+ + +GY AVQ+  G+   + V+K
Sbjct: 9   GLLGTKLGMTQVWDEDNKLIPVTVVKADPNVVTQLRSEETDGYTAVQIAYGQIDPRRVTK 68

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+P++ L E R   D     +G   +   F  GQ VDV G T GKGF+GA
Sbjct: 69  PLAGHFEKAGVTPRRHLVELRT-ADAAEYELGQDVTVEVFEAGQKVDVVGTTKGKGFAGA 127

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G+ A+HG   +HR  GS G    PGRVFK ++M GRMG  R T  NL +  +D
Sbjct: 128 MKRHGFAGVGASHGAHKNHRKPGSVGGASTPGRVFKGQRMPGRMGAVRQTTMNLTLHGID 187

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +  L+L+KG VPG+ K   +LVR + K A
Sbjct: 188 VENNLLLIKGAVPGS-KGQVVLVRSAVKGA 216


>gi|284049257|ref|YP_003399596.1| 50S ribosomal protein L3 [Acidaminococcus fermentans DSM 20731]
 gi|283953478|gb|ADB48281.1| 50S ribosomal protein L3 [Acidaminococcus fermentans DSM 20731]
          Length = 219

 Score =  165 bits (418), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 95/216 (43%), Positives = 131/216 (60%), Gaps = 5/216 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT ++  +G  +PVTV+    C V+ ++T +K+GY AVQ+G G+ K K 
Sbjct: 1   MAKGILGKKLGMTQIFEADGTLVPVTVVEAGPCVVLQNKTEEKDGYNAVQLGFGDIKEKQ 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+GFF    V+P K + E R+    +   VG   +   F  G LVD  G++ GKGF
Sbjct: 61  VNKPMKGFFDKAGVAPVKVVREVRLDAPSE-YKVGDKIAADIFAAGDLVDAVGVSRGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTG-CRQDP-GRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KRHNF      HG S SHR  GS G     P GRV K KK+ GRMGG   TV+ L 
Sbjct: 120 AGTIKRHNFARGPMKHG-SKSHREPGSNGPMHSGPGGRVIKGKKLPGRMGGISATVQRLT 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           +  VD  R LI+VKG VPGA   +++L+RD+ +  V
Sbjct: 179 IAKVDKDRNLIMVKGSVPGA-AGTFLLLRDTVRPDV 213


>gi|296168557|ref|ZP_06850361.1| 50S ribosomal protein L3 [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295896620|gb|EFG76259.1| 50S ribosomal protein L3 [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 217

 Score =  165 bits (417), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 93/214 (43%), Positives = 128/214 (59%), Gaps = 7/214 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   R +PVTV+      V   RT +++GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDENNRIVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL----LPVGSVFSPSYFTVGQLVDVTGMTIG 117
           +KP+ G +S+  V+P++ L E R+  DD+       VG   +   F  G  VDVTG + G
Sbjct: 63  NKPVTGQYSAAGVNPRRHLAELRL--DDEAAAGEYEVGQELTAEIFADGSYVDVTGTSKG 120

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF+G MKRH F G  A+HG    HR  GS G    P RVFK  +MAGRMG +RVTV+NL
Sbjct: 121 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNL 180

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            V  VD + G++L+KG VPG +    ++VR + K
Sbjct: 181 VVHKVDTENGVLLIKGAVPG-RTGGLVMVRSAIK 213


>gi|289579145|ref|YP_003477772.1| 50S ribosomal protein L3 [Thermoanaerobacter italicus Ab9]
 gi|297545329|ref|YP_003677631.1| 50S ribosomal protein L3 [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|289528858|gb|ADD03210.1| 50S ribosomal protein L3 [Thermoanaerobacter italicus Ab9]
 gi|296843104|gb|ADH61620.1| 50S ribosomal protein L3 [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 210

 Score =  165 bits (417), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 98/214 (45%), Positives = 131/214 (61%), Gaps = 7/214 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ RK GMT +++ +G  IPVTV+    C VV  +T + +GY A+QVG G+ K K 
Sbjct: 1   MKKGILGRKHGMTQIFDEKGEVIPVTVIEAGPCVVVQKKTTETDGYNAIQVGFGDVKEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           ++KP+ G F    V  K+ L EFR+   DD+    VGS      F  G  VDVTG++ GK
Sbjct: 61  LTKPLIGHFKKAGVPFKRYLREFRL---DDVSGYEVGSEIKVDIFKPGDRVDVTGISKGK 117

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF+G +KR+       +HG S  HR  GS G   DPGR FK K M G MG  RVT++NLE
Sbjct: 118 GFAGVVKRYGASRGPMSHG-SKYHRRVGSMGATTDPGRTFKGKIMPGHMGHKRVTIQNLE 176

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VV VD +  L+LVKG VPG  K S ++++DS KS
Sbjct: 177 VVKVDPELNLLLVKGSVPGP-KGSLLIIKDSVKS 209


>gi|68536923|ref|YP_251628.1| 50S ribosomal protein L3 [Corynebacterium jeikeium K411]
 gi|109893423|sp|Q4JT47|RL3_CORJK RecName: Full=50S ribosomal protein L3
 gi|68264522|emb|CAI38010.1| 50S ribosomal protein L3 [Corynebacterium jeikeium K411]
          Length = 218

 Score =  165 bits (417), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 89/213 (41%), Positives = 125/213 (58%), Gaps = 2/213 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT +++ E R +PVTV+    C V   R+ + +GY AVQ+  GE   + V+K
Sbjct: 8   GILGKKLGMTQIFDEENRVVPVTVVEAGPCVVTQVRSKETDGYEAVQIAFGEIDPRKVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ + E RV  D     VG   +   F   + VDVTG T GKG++G 
Sbjct: 68  PAAGHFKKAGVTPRRHVAEIRVA-DASSYEVGQDVTVDIFNDVKFVDVTGTTKGKGYAGG 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G  A HG   +HR  GS G    PGRVFK K+MAGRMG +RVT +NL++  VD
Sbjct: 127 MKRHGFAGQGAAHGNQAAHRRVGSIGQAATPGRVFKGKRMAGRMGNDRVTQQNLKLAKVD 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            +  L+L+KG VPG      ++V+ + K   + 
Sbjct: 187 AESNLLLIKGAVPGV-NGGLVVVKTAVKGGAHA 218


>gi|146329256|ref|YP_001210151.1| 50S ribosomal protein L3 [Dichelobacter nodosus VCS1703A]
 gi|166233139|sp|A5EX82|RL3_DICNV RecName: Full=50S ribosomal protein L3
 gi|146232726|gb|ABQ13704.1| 50S ribosomal protein L3 [Dichelobacter nodosus VCS1703A]
          Length = 212

 Score =  165 bits (417), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V +K+GMT +++ EG    VTV+ +    +   +T + +GY AVQV  G  K   
Sbjct: 1   MTMGLVGQKVGMTRIFDEEGTASAVTVIEIQPNIISQIKTDETDGYHAVQVSVGHRKSSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            +K + G F+  N+S    + EFRV  ++     VG     + F  GQ VDV   +IGKG
Sbjct: 61  TTKALAGHFAKANISAAALVKEFRVDSEEIAKYEVGKPVELAIFEQGQRVDVRARSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KRHNF G R THG S+SHR  GS G  Q PGRVFK KKM+G MG    +V+N+E+
Sbjct: 121 YAGTIKRHNFRGQRKTHGNSVSHRVPGSIGQNQTPGRVFKGKKMSGHMGNKMCSVQNIEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
             +D +R L+L+KG VPGA K  ++++R S K+
Sbjct: 181 ARIDVERNLLLLKGSVPGA-KGGYVVIRPSVKA 212


>gi|172039995|ref|YP_001799709.1| 50S ribosomal protein L3 [Corynebacterium urealyticum DSM 7109]
 gi|226725155|sp|B1VET6|RL3_CORU7 RecName: Full=50S ribosomal protein L3
 gi|171851299|emb|CAQ04275.1| 50S ribosomal protein L3 [Corynebacterium urealyticum DSM 7109]
          Length = 218

 Score =  165 bits (417), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 92/203 (45%), Positives = 119/203 (58%), Gaps = 3/203 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT +++ E R +PVTV+    C V   RT D +GY AVQ+  GE   + V+K
Sbjct: 8   GILGKKLGMTQIFDDENRVVPVTVVEAGPCVVTQVRTKDIDGYEAVQIAFGEIDPRKVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ + E RV  D     VG   +   F     VDVTG + G GF+G 
Sbjct: 68  PESGHFKKAGVTPRRHVAEIRVA-DASGYEVGQDVTVEIFNEVDFVDVTGTSKGHGFAGG 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G  A HG   +HR  G  G    PGRVFK K+MAGRMG NRVT++NL+V  VD
Sbjct: 127 MKRHGFAGQGAAHGNQAAHRRVGGIGGAATPGRVFKGKRMAGRMGNNRVTMQNLKVAKVD 186

Query: 184 DKRGLILVKGCVPGAKKNSWILV 206
               L+L+KG VPG   N  I+V
Sbjct: 187 TDSNLLLIKGAVPGI--NGGIVV 207


>gi|32491292|ref|NP_871546.1| hypothetical protein WGLp543 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|42559632|sp|Q8D212|RL3_WIGBR RecName: Full=50S ribosomal protein L3
 gi|25166499|dbj|BAC24689.1| rplC [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 215

 Score =  165 bits (417), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 89/202 (44%), Positives = 130/202 (64%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT  +N +G  IPVTV+ + + ++V  + ++K+GY ++QV  G  K    +K
Sbjct: 3   GLIGRKIGMTRTFNSDGSSIPVTVIKISDNKIVQIKKIEKDGYSSIQVTTGVKKFSRENK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
            + G F    V   + L+EF+V K+     VG V S + F     V++TG++ GKGFSG 
Sbjct: 63  SIIGHFKKNKVELGRGLWEFKVDKNSKFY-VGQVLSINTFININKVNITGISKGKGFSGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR NF G  A+HG S+SHR+ GS G  Q PG+VFK KKM+G +G N+ TVKNL VV +D
Sbjct: 122 MKRWNFHGQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMSGHLGYNKNTVKNLFVVKID 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +  L+L+KG VPG+K +  I+
Sbjct: 182 LEHELLLIKGSVPGSKGSDLII 203


>gi|300702780|ref|YP_003744381.1| 50S ribosomal protein L3 [Ralstonia solanacearum CFBP2957]
 gi|299070442|emb|CBJ41737.1| 50S ribosomal subunit protein L3 [Ralstonia solanacearum CFBP2957]
          Length = 220

 Score =  165 bits (417), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 93/213 (43%), Positives = 127/213 (59%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V+  +G  IPVTVL +   +V   +T + +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + + EFR+       L +G       F  GQ +DV G TIGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEIIAEFRIDAAKAAELKLGDTIDVDLFAAGQKIDVQGTTIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RA+HG S SH   GS G  QDPGRVF  K+M G MG    TV+NL +
Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LVKG VPGA K+ +++V  + K+
Sbjct: 181 VRVDAERKLLLVKGAVPGA-KSGFVVVSPAVKA 212


>gi|254785079|ref|YP_003072507.1| 50S ribosomal protein L3 [Teredinibacter turnerae T7901]
 gi|259709742|sp|C5BQ61|RL3_TERTT RecName: Full=50S ribosomal protein L3
 gi|237683501|gb|ACR10765.1| ribosomal protein L3 [Teredinibacter turnerae T7901]
          Length = 214

 Score =  165 bits (417), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 90/211 (42%), Positives = 126/211 (59%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++  +G  +PVTV+ +D  ++   ++++ +GY AVQV  G  +   
Sbjct: 1   MTIGIVGRKSGMTRIFTDDGLSVPVTVIEVDPNRITQVKSVETDGYAAVQVTVGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+       + ++E R  +  +   VG   +   F  GQ VDVTG + GKGF
Sbjct: 61  VTKAEAGHFAKAQTEAGRGVWELR-NEAGEAFEVGGQLTVEAFEAGQKVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF    ATHG S+SHR+ GS G  Q PGRV K KKM+G MG  RVT +NLEVV
Sbjct: 120 AGTVKRWNFRTQDATHGNSLSHRAPGSIGQCQTPGRVMKGKKMSGHMGAERVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L+L+KG VPGA     + +R + K
Sbjct: 180 RVDVERNLLLIKGAVPGAPGGD-VFIRPAVK 209


>gi|184200262|ref|YP_001854469.1| 50S ribosomal protein L3 [Kocuria rhizophila DC2201]
 gi|212288402|sp|B2GIL4|RL3_KOCRD RecName: Full=50S ribosomal protein L3
 gi|183580492|dbj|BAG28963.1| 50S ribosomal protein L3 [Kocuria rhizophila DC2201]
          Length = 218

 Score =  165 bits (417), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 92/210 (43%), Positives = 124/210 (59%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++  G+ +PVTV+  D+  V   R  DK+GY AVQ+G G    + V+K
Sbjct: 11  GLLGTKLGMTQVWDENGKFVPVTVVKADSNVVTQLRNTDKDGYNAVQIGFGAIDPRKVTK 70

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F++  V+P++ + E R   D     +G   S   F  G  VDV G T GKG +G 
Sbjct: 71  PLAGHFAAAGVTPRRHVVELRTS-DAAEYELGQELSVELFEAGAKVDVVGTTKGKGTAGV 129

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G+ A+HG   +HR  GS G    P RVFK  +MAGRMG  R T  NL V +VD
Sbjct: 130 MKRHGFSGVGASHGAHKNHRKPGSIGGASYPARVFKGMRMAGRMGNARHTTMNLTVHAVD 189

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +  L+L+KG +PG  K S +LVR + K A
Sbjct: 190 AENSLLLIKGALPG-PKGSVVLVRSTVKGA 218


>gi|219849887|ref|YP_002464320.1| 50S ribosomal protein L3 [Chloroflexus aggregans DSM 9485]
 gi|254803662|sp|B8G6S5|RL3_CHLAD RecName: Full=50S ribosomal protein L3
 gi|219544146|gb|ACL25884.1| ribosomal protein L3 [Chloroflexus aggregans DSM 9485]
          Length = 210

 Score =  164 bits (416), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 93/212 (43%), Positives = 130/212 (61%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GM   +  EGR IPVTV+    C V   RT +++GY AVQ+G  E + + 
Sbjct: 1   MIHGLLGRKIGMMQYFTKEGRAIPVTVIAAGPCIVTQIRTPERDGYSAVQLGYEEVEARK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLL-PVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++KP +G   +      + L EF    DD L    G V +   F  GQ VD++G + G+G
Sbjct: 61  LTKPQQGHLKASGGKMLRYLREFSA--DDPLAHKPGEVVTVELFKPGQKVDISGTSKGRG 118

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRH F G   THG S  HR+ GS G    PGRV+K ++MAGRMGG+RVT++NLEV
Sbjct: 119 FAGVVKRHGFRGGPKTHGQSDRHRAPGSIGAGTTPGRVWKGQRMAGRMGGDRVTIQNLEV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V V  ++ L+LVKG VPGA +N  + +R + K
Sbjct: 179 VEVLPEQNLLLVKGSVPGA-RNGLLQIRKAVK 209


>gi|158319543|ref|YP_001512050.1| ribosomal protein L3 [Alkaliphilus oremlandii OhILAs]
 gi|189042830|sp|A8MLE0|RL3_ALKOO RecName: Full=50S ribosomal protein L3
 gi|158139742|gb|ABW18054.1| ribosomal protein L3 [Alkaliphilus oremlandii OhILAs]
          Length = 210

 Score =  164 bits (416), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 89/197 (45%), Positives = 122/197 (61%), Gaps = 2/197 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT +++  G  IPVTV+ ++   V   +T++K+GY A+QVG G+   +NV+K
Sbjct: 3   GLVGRKIGMTQMFDETGLVIPVTVIEVEANAVTQVKTIEKDGYNAIQVGYGQINERNVNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G F    V+PK+ L EFR++  +     G       F  G  VD++G++ GKGF G 
Sbjct: 63  PSKGHFDKAGVTPKRSLQEFRLESTEGFT-AGQELKADLFKAGDKVDISGVSKGKGFQGV 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KRHN       HG S  HR  GS G    P RVFK KK+AG MG   VT++NLEVV VD
Sbjct: 122 IKRHNQSRGPMAHG-SRYHRGPGSMGAASYPSRVFKGKKLAGHMGHENVTIQNLEVVKVD 180

Query: 184 DKRGLILVKGCVPGAKK 200
            +R L++VKG VPG KK
Sbjct: 181 VERNLLIVKGAVPGPKK 197


>gi|323706450|ref|ZP_08118011.1| 50S ribosomal protein L3 [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323534170|gb|EGB23960.1| 50S ribosomal protein L3 [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 209

 Score =  164 bits (416), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 94/212 (44%), Positives = 129/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K GMT ++ +    IPVTV+    C VV  +T + +GY A+QVG G+ K K 
Sbjct: 1   MKKAILGKKHGMTQIF-VGNEMIPVTVVEAGPCVVVQKKTKENDGYDAIQVGFGDVKEKR 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + KP++G F+  NV  KK L EFR+  D     VGS      F+VG  VDV G + GKGF
Sbjct: 60  LIKPLKGHFAKANVPFKKYLREFRLD-DISSYEVGSEIKADIFSVGDRVDVIGTSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR+N       HG S  HR  GS G   DP R FK K++ G MG  RVT++NLEVV
Sbjct: 119 AGVVKRYNANRGPMAHG-SKYHRRPGSMGASSDPSRTFKGKRLPGHMGNERVTIQNLEVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD ++ L+L+KG VPG  K S +++RD+ KS
Sbjct: 178 KVDPEKNLLLIKGSVPGV-KGSLLMIRDTVKS 208


>gi|237742672|ref|ZP_04573153.1| LSU ribosomal protein L3P [Fusobacterium sp. 4_1_13]
 gi|256846067|ref|ZP_05551525.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_36A2]
 gi|294784802|ref|ZP_06750090.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_27]
 gi|229430320|gb|EEO40532.1| LSU ribosomal protein L3P [Fusobacterium sp. 4_1_13]
 gi|256719626|gb|EEU33181.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_36A2]
 gi|294486516|gb|EFG33878.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_27]
          Length = 211

 Score =  164 bits (416), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT ++  +G+ +PVTV+      V+  +T +K+GY+A+Q+G  E K KN +
Sbjct: 2   SGILGKKIGMTQIFE-DGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   V P++ + E  V+  D    +G           + VD+TG + GKG SG
Sbjct: 61  KPLMGIFNKAGVKPQRFVKELAVESVDGY-ELGQEIKVDVLAEVEYVDITGTSKGKGTSG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGG RA+HGVS +HR  GS G    PG+V K K+MAG+ G   VTV+NL+VV V
Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D +  L+L+KG VPGA KN ++++R + K  +
Sbjct: 180 DAEHNLLLIKGAVPGA-KNGYLVIRPAVKKVI 210


>gi|238763730|ref|ZP_04624689.1| 50S ribosomal protein L3 [Yersinia kristensenii ATCC 33638]
 gi|238698032|gb|EEP90790.1| 50S ribosomal protein L3 [Yersinia kristensenii ATCC 33638]
          Length = 209

 Score =  164 bits (416), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 91/202 (45%), Positives = 126/202 (62%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   ++L+ +GY AVQV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYRAVQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+ FR+ +  +    G   S   F   + VDVTG + GKGF+G 
Sbjct: 63  PEAGHFAKAGVEAGRGLWGFRLPEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG +G  RVTV++L+VV VD
Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +R L+LVKG VPGA   + I+
Sbjct: 182 AERNLLLVKGAVPGATGGNLIV 203


>gi|121592712|ref|YP_984608.1| 50S ribosomal protein L3 [Acidovorax sp. JS42]
 gi|222109493|ref|YP_002551757.1| 50S ribosomal protein l3 [Acidovorax ebreus TPSY]
 gi|166233110|sp|A1W2Q7|RL3_ACISJ RecName: Full=50S ribosomal protein L3
 gi|254803670|sp|B9MB73|RL3_DIAST RecName: Full=50S ribosomal protein L3
 gi|120604792|gb|ABM40532.1| LSU ribosomal protein L3P [Acidovorax sp. JS42]
 gi|221728937|gb|ACM31757.1| ribosomal protein L3 [Acidovorax ebreus TPSY]
          Length = 224

 Score =  164 bits (416), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 92/216 (42%), Positives = 131/216 (60%), Gaps = 13/216 (6%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  +PVTV+ + N +V   +T + +GY+++QV  G  K   V+K
Sbjct: 8   GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVSLQVTFGSRKASRVTK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKD-------DDLLPVGSVFSPSYFTVGQLVDVTGMTI 116
           P  G  +   V   + + EFRV  +          +PV  VF+     VGQ VDV G +I
Sbjct: 68  PEAGHLAKAGVEAGEIIREFRVTPEVAGKYAAGAAVPVADVFA-----VGQKVDVQGTSI 122

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           GKGF+G +KRHNFG  RA+HG S SH   GS G  QDPGRVF  KKM G +G   VT +N
Sbjct: 123 GKGFAGTIKRHNFGSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKKMTGHLGDVTVTTQN 182

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           L+VV +D+ R L+L+KG VPG+ K  ++ VR + K+
Sbjct: 183 LDVVRIDEARQLLLIKGAVPGS-KGGFVTVRPAVKA 217


>gi|78357300|ref|YP_388749.1| 50S ribosomal protein L3 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|109893427|sp|Q30Z42|RL3_DESDG RecName: Full=50S ribosomal protein L3
 gi|78219705|gb|ABB39054.1| LSU ribosomal protein L3P [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 209

 Score =  164 bits (416), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 93/206 (45%), Positives = 128/206 (62%), Gaps = 2/206 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           + G++ RK+GMT ++  +G  + VTV+    C V+  +   K+GY AVQ+G  EAK K+V
Sbjct: 4   KMGILGRKIGMTRIFANDGSAVAVTVIQAGPCPVIQVKDAAKDGYNAVQIGFEEAKEKHV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP RG          + L E R++   +   VG   +   FT G+ V VTG +IGKGF+
Sbjct: 64  NKPARGHMDKAGRGLFRVLREIRLEAPAEQ-KVGDDLTVGLFTPGEFVKVTGTSIGKGFA 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR NFGG+ A+HG    HRS GS G    PG+V+KNKKMAG MG  +VTVK+L+++ 
Sbjct: 123 GVMKRWNFGGMPASHGHEAVHRSPGSIGHATFPGKVWKNKKMAGHMGARQVTVKSLQIIE 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  +  LILVKG VPG  KN  ++VR
Sbjct: 183 VRAEDNLILVKGPVPGP-KNGLVMVR 207


>gi|41410259|ref|NP_963095.1| 50S ribosomal protein L3 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118463063|ref|YP_883606.1| 50S ribosomal protein L3 [Mycobacterium avium 104]
 gi|254776907|ref|ZP_05218423.1| 50S ribosomal protein L3 [Mycobacterium avium subsp. avium ATCC
           25291]
 gi|81831570|sp|Q73SB3|RL3_MYCPA RecName: Full=50S ribosomal protein L3
 gi|166233161|sp|A0QL18|RL3_MYCA1 RecName: Full=50S ribosomal protein L3
 gi|41399093|gb|AAS06711.1| RplC [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118164350|gb|ABK65247.1| ribosomal protein L3 [Mycobacterium avium 104]
          Length = 217

 Score =  164 bits (416), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 127/212 (59%), Gaps = 3/212 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   R +PVTV+      V   RT +++GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTPEQDGYSAVQLAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP+ G +++  ++P++ L E R+   D      VG   +   FT G  VDVTG + GKG
Sbjct: 63  NKPVTGQYAAAGINPRRFLAELRLDNPDAAAEYQVGQELTAEIFTDGSYVDVTGTSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKRH F G  A+HG    HR  GS G    P RVFK  +MAGRMG +RVTV+NL V
Sbjct: 123 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             VD + G++L+KG VPG +    ++VR + K
Sbjct: 183 HKVDTENGVLLIKGAVPG-RTGGLVMVRSAVK 213


>gi|319948723|ref|ZP_08022844.1| 50S ribosomal protein L3 [Dietzia cinnamea P4]
 gi|319437625|gb|EFV92624.1| 50S ribosomal protein L3 [Dietzia cinnamea P4]
          Length = 221

 Score =  164 bits (416), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 88/210 (41%), Positives = 120/210 (57%), Gaps = 3/210 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+    C V   RT + +GY AVQ+  G    + V+K
Sbjct: 8   GILGAKLGMTQVFDENNRVVPVTVVKAGPCVVTGIRTEENDGYNAVQIAFGAVDPRKVTK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           P+ G F    V+P++ + E R+   +      +G       F  G  VDVTG + GKGF+
Sbjct: 68  PVAGQFEKAGVTPRRHIAEIRLDNAEQAAGYEIGQEIGADVFEDGAFVDVTGTSKGKGFA 127

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F G  A+HG    HR  GS G    PGRVFK K MAGRMG  RVT  NL+V  
Sbjct: 128 GTMKRHGFAGQGASHGTQAVHRKPGSIGGASTPGRVFKGKAMAGRMGNERVTTMNLKVHK 187

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           VD + G++L+KG +PG +    ++VR + K
Sbjct: 188 VDAEAGVLLIKGAIPG-RNGGLVMVRSAVK 216


>gi|326334545|ref|ZP_08200756.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325693314|gb|EGD35242.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 205

 Score =  164 bits (416), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 85/205 (41%), Positives = 129/205 (62%), Gaps = 4/205 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP T++    C V   RT + +GY A+Q+G  + K K+ +
Sbjct: 2   SGLIGKKVGMTSIFDENGKNIPCTIIEAGPCVVTQVRTKEVDGYEALQLGFDDKKEKHTN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F+   +SPKKKL EF  Q  +    +G   +  +F  G+ VDVTG + GKGF G
Sbjct: 62  KAAAGHFAKAGISPKKKLIEF--QGFESTYKLGDTITAEFFVEGEFVDVTGTSKGKGFQG 119

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            ++RH FGG+ ++THG     R+ GS G    P RVFK  +MAGRMG  +VTV+NL V+ 
Sbjct: 120 VVRRHGFGGVGQSTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLRVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           V  ++ L+++KGCVPG  KN+++ +
Sbjct: 180 VIPEKNLLILKGCVPG-HKNAYVTI 203


>gi|73542863|ref|YP_297383.1| 50S ribosomal protein L3 [Ralstonia eutropha JMP134]
 gi|109893544|sp|Q46WE4|RL3_RALEJ RecName: Full=50S ribosomal protein L3
 gi|72120276|gb|AAZ62539.1| LSU ribosomal protein L3P [Ralstonia eutropha JMP134]
          Length = 216

 Score =  164 bits (416), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+ + + +V   +T + +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTDDGDSIPVTVVEVGDNRVTQIKTDETDGYTAVQVTFGARRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + + EFR+       L  G   S   F VGQ +DV G+TIGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEIIREFRIDAAKAAELQTGGSLSVDLFEVGQKIDVQGVTIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR++F   RATHG S SH   GS G  QDPGRVF  K+M G +G    TV+NLE+
Sbjct: 121 YAGTIKRYHFASGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTRTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
             +D +R L+LVKG +PG+ KN  ++V  + K+
Sbjct: 181 AKIDAERKLLLVKGAIPGS-KNGKVIVTPAVKA 212


>gi|296141115|ref|YP_003648358.1| 50S ribosomal protein L3 [Tsukamurella paurometabola DSM 20162]
 gi|296029249|gb|ADG80019.1| 50S ribosomal protein L3 [Tsukamurella paurometabola DSM 20162]
          Length = 218

 Score =  164 bits (416), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 88/208 (42%), Positives = 125/208 (60%), Gaps = 2/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      V   RT   +GY AVQ+  G    + V+K
Sbjct: 8   GILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQIRTEATDGYDAVQIAFGAIDPRKVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F+   V+P++ + E R+  D     VG       F+ G+ VDVTG++ GKG++G 
Sbjct: 68  PVSGQFAKAGVTPRRHIAELRIA-DTSEYEVGQELGADVFSGGEFVDVTGISKGKGYAGV 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GL A+HG    HR+ GS G    PGRVFK  +MAGRMG ++VT +NL V  VD
Sbjct: 127 MKRHGFAGLGASHGAQAVHRAPGSIGGCATPGRVFKGVRMAGRMGSDKVTTQNLTVFKVD 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
              G++L+KG +PG +K   ++VR + K
Sbjct: 187 ADAGVLLIKGAIPG-RKGGLVMVRTAVK 213


>gi|225850735|ref|YP_002730969.1| 50S ribosomal protein L3 [Persephonella marina EX-H1]
 gi|254803685|sp|C0QQM3|RL3_PERMH RecName: Full=50S ribosomal protein L3
 gi|225645055|gb|ACO03241.1| 50S ribosomal protein L3 [Persephonella marina EX-H1]
          Length = 227

 Score =  164 bits (416), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 90/201 (44%), Positives = 124/201 (61%), Gaps = 2/201 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+  +G+ IPVTV+ ++   VV  RT DK+GY AV +G GE K K 
Sbjct: 1   MPKGIIGKKIGMTRVFK-DGKAIPVTVIQVEPNYVVNIRTEDKDGYSAVVLGTGEKKEKR 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
             KPM   F    + P + L EF +++ +   P   V     F  G LVDVTG + G+GF
Sbjct: 60  TPKPMLAIFKKAGLKPLRHLAEFPLKEGEQPEPGQEVKVEDVFEKGDLVDVTGTSKGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           + AMKR +F G + +HG S  HR+ GS G   DPGRV+K K+MAG  G   +TV+ LEVV
Sbjct: 120 ASAMKRWDFSGFKKSHG-SRYHRAVGSIGACSDPGRVWKTKRMAGHYGNETITVQGLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKN 201
            +  ++ +ILVKG VPGA K+
Sbjct: 179 DIIPEKNIILVKGSVPGAPKS 199


>gi|288925715|ref|ZP_06419647.1| 50S ribosomal protein L3 [Prevotella buccae D17]
 gi|315606504|ref|ZP_07881519.1| 50S ribosomal protein L3 [Prevotella buccae ATCC 33574]
 gi|288337653|gb|EFC76007.1| 50S ribosomal protein L3 [Prevotella buccae D17]
 gi|315251910|gb|EFU31884.1| 50S ribosomal protein L3 [Prevotella buccae ATCC 33574]
          Length = 204

 Score =  164 bits (416), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 86/205 (41%), Positives = 129/205 (62%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G GEAK K  SK
Sbjct: 3   GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F     +PKK L EF+  ++ +L   G   +   F   + VDV G++ GKGF G 
Sbjct: 63  PQLGHFKKAGTTPKKHLAEFKFDEEYNL---GDTINVELFNDTKFVDVVGISKGKGFQGV 119

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           MKRH FGG+ ++THG     R  GS G    P +VFK  +MAG+MGG+RVT +NL+V+ V
Sbjct: 120 MKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLQVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             ++ L++VKG + G K ++ ++ +
Sbjct: 180 IPEQNLLIVKGSIAGCKGSTVLIEK 204


>gi|288942072|ref|YP_003444312.1| 50S ribosomal protein L3 [Allochromatium vinosum DSM 180]
 gi|288897444|gb|ADC63280.1| 50S ribosomal protein L3 [Allochromatium vinosum DSM 180]
          Length = 216

 Score =  164 bits (416), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 90/198 (45%), Positives = 123/198 (62%), Gaps = 1/198 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GV+ RK GMT V+   G  IPVTV+ +   +V   ++ + +GY A+QV  G+ +   
Sbjct: 1   MSIGVIGRKAGMTRVFTEAGESIPVTVIEVTPNRVSQVKSEETDGYRAIQVAFGQRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KPM G ++   V   + L EFR++  +   L VG   S S F  GQ VDV G+T G+G
Sbjct: 61  VTKPMAGHYAKAGVEAGEVLREFRLEGGEGADLQVGQEISVSIFEPGQKVDVRGVTKGRG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG ++RH+F G   THG S+SHR+ GS G  Q PGRV+K KKMAG +G      +NLEV
Sbjct: 121 FSGVIRRHHFAGQDRTHGNSLSHRAPGSIGQNQTPGRVWKGKKMAGHLGAANRCQQNLEV 180

Query: 180 VSVDDKRGLILVKGCVPG 197
           V +D +R L+LV+G VPG
Sbjct: 181 VRIDAERNLLLVRGGVPG 198


>gi|254822787|ref|ZP_05227788.1| 50S ribosomal protein L3 [Mycobacterium intracellulare ATCC 13950]
          Length = 217

 Score =  164 bits (415), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 92/212 (43%), Positives = 127/212 (59%), Gaps = 3/212 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   R +PVTV+      V   RT +++GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDENNRIVPVTVVKAGPNVVTRIRTPEQDGYSAVQLAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP+ G +++  V+P++ L E R+   D      VG   +   FT G  VDVTG + GKG
Sbjct: 63  NKPVTGQYAAAGVNPRRFLAELRLDNPDAAAEYQVGQELTAEIFTDGSYVDVTGTSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKRH F G  A+HG    HR  GS G    P RVFK  +MAGRMG +RVTV+NL V
Sbjct: 123 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             VD + G++L+KG VPG +    ++VR + K
Sbjct: 183 HKVDTENGVLLIKGAVPG-RTGGLVVVRSAVK 213


>gi|183981053|ref|YP_001849344.1| 50S ribosomal protein L3 RplC [Mycobacterium marinum M]
 gi|226730539|sp|B2HSN1|RL3_MYCMM RecName: Full=50S ribosomal protein L3
 gi|183174379|gb|ACC39489.1| 50S ribosomal protein L3 RplC [Mycobacterium marinum M]
          Length = 217

 Score =  164 bits (415), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 128/212 (60%), Gaps = 3/212 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   + +PVTV+      V   RT +++GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP+ G +++  V+P++ L E R+   + +    VG   +   F  G  VDVTG + GKG
Sbjct: 63  NKPVTGQYTAAGVNPRRHLAELRLDDAEAVTEYEVGQELTAEIFADGSYVDVTGTSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKRH F G  A+HG    HR  GS G    P RVFK  +MAGRMG +RVTV+NL V
Sbjct: 123 FAGTMKRHGFSGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             VD ++G++L+KG VPG +    ++VR + K
Sbjct: 183 HKVDAEQGVLLIKGAVPG-RTGGLVMVRSAIK 213


>gi|88608492|ref|YP_506157.1| ribosomal protein L3 [Neorickettsia sennetsu str. Miyayama]
 gi|88600661|gb|ABD46129.1| ribosomal protein L3 [Neorickettsia sennetsu str. Miyayama]
          Length = 210

 Score =  164 bits (415), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 96/210 (45%), Positives = 134/210 (63%), Gaps = 7/210 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ +K+G T VY+     +P+T+L L+  + VV    +++G +  +V  G  K+K  
Sbjct: 3   RVGLLLKKVGCTSVYDDRFSLVPITLLQLE--ENVVLSAEERDGVVIARVSFGTRKLK-- 58

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            +P       + +    ++ EFRV       P+GS+ +  +F  GQ VD  G +IGKGF+
Sbjct: 59  -RPQSACLKKLGLEKGGRVVEFRVSPRFMPEPLGSL-TVEHFRPGQYVDAVGTSIGKGFA 116

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF GLRA+HGVSISHRS GSTG  QDPG+VFK KKMAG MG  RVT++NL V  
Sbjct: 117 GVMKRHNFAGLRASHGVSISHRSGGSTGQCQDPGKVFKGKKMAGHMGNARVTIQNLLVQL 176

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           VD +  LI V+G VPG  KNS++L++D+ K
Sbjct: 177 VDVENCLIGVRGSVPGC-KNSYVLLKDALK 205


>gi|54022700|ref|YP_116942.1| 50S ribosomal protein L3 [Nocardia farcinica IFM 10152]
 gi|81823259|sp|Q5Z1W3|RL3_NOCFA RecName: Full=50S ribosomal protein L3
 gi|54014208|dbj|BAD55578.1| putative ribosomal protein L3 [Nocardia farcinica IFM 10152]
          Length = 221

 Score =  164 bits (415), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 90/214 (42%), Positives = 127/214 (59%), Gaps = 2/214 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           +G++  KLGMT V++ + R +PVTV+      V   RT +++GY AVQV  G    + V+
Sbjct: 10  AGILGTKLGMTQVFDEKNRVVPVTVIKAGPNVVTQIRTEERDGYSAVQVAFGAIDPRKVN 69

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   V+P++ + E RV  D     VG   +   F  G  VDVTG + GKG++G
Sbjct: 70  KPVAGQFAKAGVTPRRHIAEIRVA-DASSFEVGQEINADVFEEGSYVDVTGTSKGKGYAG 128

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G  A+HG    HR  GS G    PGRVFK  +MAGRMG +RVT +NL V  V
Sbjct: 129 TMKRHGFRGQGASHGAQAVHRRPGSIGGCATPGRVFKGMRMAGRMGNDRVTTQNLSVHKV 188

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           D + GL+L+KG +PG +K   ++V+ + K   + 
Sbjct: 189 DAENGLLLIKGAIPG-RKGGVVIVKSAVKGGAHA 221


>gi|330470173|ref|YP_004407916.1| 50S ribosomal protein L3 [Verrucosispora maris AB-18-032]
 gi|328813144|gb|AEB47316.1| 50S ribosomal protein L3 [Verrucosispora maris AB-18-032]
          Length = 207

 Score =  164 bits (415), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 88/201 (43%), Positives = 122/201 (60%), Gaps = 3/201 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V++   + +PVTV+    C +   R  DK+GY AVQ+  G    +   KP+RG ++ 
Sbjct: 1   MTQVWD-NNKVVPVTVVQAGPCVISQVRDADKDGYSAVQLAYGTIDPRKAKKPLRGHYAK 59

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
            +V+P++ + E R     D   +G   +   F  G  +DVTG T GKG++G MKRH F G
Sbjct: 60  ADVAPRRHIVELRTSDAADY-SLGQEITVEEFPAGISIDVTGKTKGKGYAGPMKRHGFHG 118

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
           LRA+HGV   HRS GS G    PGRVFK  +MAGRMGG R TV+NL V +VD +  L+LV
Sbjct: 119 LRASHGVERKHRSPGSIGACATPGRVFKGTRMAGRMGGVRYTVQNLTVQAVDTENNLLLV 178

Query: 192 KGCVPGAKKNSWILVRDSFKS 212
           +G +PG  K + +LVR + K+
Sbjct: 179 RGAIPGP-KGALVLVRTAAKT 198


>gi|194335445|ref|YP_002017239.1| ribosomal protein L3 [Pelodictyon phaeoclathratiforme BU-1]
 gi|226730543|sp|B4SBU7|RL3_PELPB RecName: Full=50S ribosomal protein L3
 gi|194307922|gb|ACF42622.1| ribosomal protein L3 [Pelodictyon phaeoclathratiforme BU-1]
          Length = 209

 Score =  164 bits (415), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 86/202 (42%), Positives = 125/202 (61%), Gaps = 1/202 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT ++N +   +  T++    C V   +  DK GY A Q+G GE K K VSKP
Sbjct: 4   ILGKKIGMTRLFNEKREAVSCTIIQAGPCFVTQVKRADKEGYDAYQIGIGERKEKKVSKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           ++G +    V+P  KL EF  ++ +  L +GS  S   FT G+ V+V G++ GKGF+G M
Sbjct: 64  LQGHYKKAGVAPGFKLAEFDFKELNQELELGSAVSVESFTEGEKVNVLGVSKGKGFAGVM 123

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHNF G + THG S   R+ GS G   DP RVFK  +MAGRMG + +TV+NL +  +  
Sbjct: 124 KRHNFSGGQRTHGQSDRQRAPGSVGGSSDPSRVFKGTRMAGRMGSDNITVRNLVIFKIMP 183

Query: 185 KRGLILVKGCVPGAKKNSWILV 206
           +  LI++KG VPG  KNS++ +
Sbjct: 184 ESNLIVIKGSVPGP-KNSYVKI 204


>gi|237806875|ref|YP_002891315.1| 50S ribosomal protein L3 [Tolumonas auensis DSM 9187]
 gi|259709745|sp|C4L7T0|RL3_TOLAT RecName: Full=50S ribosomal protein L3
 gi|237499136|gb|ACQ91729.1| ribosomal protein L3 [Tolumonas auensis DSM 9187]
          Length = 212

 Score =  164 bits (415), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 95/213 (44%), Positives = 131/213 (61%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RKLGMT V+  +G  IPVTV+ ++  +V   +TL+ +GY AVQV  G  K   
Sbjct: 1   MTLGLVGRKLGMTRVFTEDGVSIPVTVIEVEANRVTQLKTLETDGYTAVQVTTGVKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++K   G F+   V   + L+EFR+   +   L VGS      F   +  DVTG++ GKG
Sbjct: 61  LTKAEAGHFAKAEVEAGRGLWEFRLNDGEGADLTVGSELKVDIFADVKKADVTGISKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KR NF     THG S SHR  GS G  Q PG+VFK KKMAG +G  RVTV++L++
Sbjct: 121 FAGVVKRWNFRTQDMTHGNSRSHRVPGSIGQNQSPGKVFKGKKMAGHLGCERVTVQSLDI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+L+KG VPGA  N  ++V+ + K+
Sbjct: 181 VRVDVERNLLLIKGAVPGA-TNGDVIVKPAVKA 212


>gi|237743899|ref|ZP_04574380.1| LSU ribosomal protein L3P [Fusobacterium sp. 7_1]
 gi|229432930|gb|EEO43142.1| LSU ribosomal protein L3P [Fusobacterium sp. 7_1]
          Length = 211

 Score =  164 bits (415), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT ++  +G+ IPVTV+      V+  +T +K+GY+A+Q+G  E K KN +
Sbjct: 2   SGILGKKIGMTQIFE-DGKFIPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   V P++ + E  V+  D    +G             VD+TG + GKG SG
Sbjct: 61  KPLMGIFNKAGVKPQRFVKELAVESVDGY-ELGQEIKVDVLAEVGYVDITGTSKGKGTSG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGG RA+HGVS +HR  GS G    PG+V K K+MAG+ G   VTV+NL+VV V
Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D +  L+L+KG VPGA KNS+++++ + K  +
Sbjct: 180 DAEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210


>gi|304384275|ref|ZP_07366686.1| 50S ribosomal protein L3 [Prevotella marshii DSM 16973]
 gi|304334591|gb|EFM00873.1| 50S ribosomal protein L3 [Prevotella marshii DSM 16973]
          Length = 204

 Score =  164 bits (415), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 89/205 (43%), Positives = 126/205 (61%), Gaps = 5/205 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V++ +G+ +P TV+    C V   +TL+K+GY AVQ+G  EAK    +K
Sbjct: 3   GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTLEKDGYKAVQLGFAEAKESRTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           PM G F     +PKK L EF+ +++ +L   G   +   F   + VDV G + GKGF G 
Sbjct: 63  PMLGIFKKAGTTPKKHLVEFKFEEEYNL---GDTITVELFNDTEFVDVVGTSKGKGFQGV 119

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ ++THG     R  GS G    P +VFK  +MAG+MGG+RVT +NL V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLRVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  LILVKG V G  K S +L++
Sbjct: 180 IPEHNLILVKGSVAGC-KGSTVLIK 203


>gi|308376477|ref|ZP_07438983.2| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu008]
 gi|308350981|gb|EFP39832.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu008]
          Length = 221

 Score =  164 bits (414), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 125/212 (58%), Gaps = 3/212 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   R +PVTV+      V   RT +++GY AVQ+  GE   + V
Sbjct: 7   RKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP--VGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP+ G +++  V+P++ L E R+   D      VG   +   F  G  VDVTG + GKG
Sbjct: 67  NKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKG 126

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKRH F G  A+HG    HR  GS G    P RVFK  +MAGRMG +RVTV NL V
Sbjct: 127 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLV 186

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             VD + G++L+KG VPG +    ++VR + K
Sbjct: 187 HKVDAENGVLLIKGAVPG-RTGGLVMVRSAIK 217


>gi|15607841|ref|NP_215215.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis H37Rv]
 gi|15840108|ref|NP_335145.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis CDC1551]
 gi|31791886|ref|NP_854379.1| 50S ribosomal protein L3 [Mycobacterium bovis AF2122/97]
 gi|121636623|ref|YP_976846.1| 50S ribosomal protein L3 [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148660476|ref|YP_001281999.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis H37Ra]
 gi|148821906|ref|YP_001286660.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis F11]
 gi|167967943|ref|ZP_02550220.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis H37Ra]
 gi|215402485|ref|ZP_03414666.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis 02_1987]
 gi|215410256|ref|ZP_03419064.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis 94_M4241A]
 gi|215425943|ref|ZP_03423862.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis T92]
 gi|215429541|ref|ZP_03427460.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis EAS054]
 gi|215444824|ref|ZP_03431576.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis T85]
 gi|218752351|ref|ZP_03531147.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis GM 1503]
 gi|219556550|ref|ZP_03535626.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis T17]
 gi|224989095|ref|YP_002643782.1| 50S ribosomal protein L3 [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253797644|ref|YP_003030645.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis KZN 1435]
 gi|254231021|ref|ZP_04924348.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis C]
 gi|254363648|ref|ZP_04979694.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254549662|ref|ZP_05140109.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260185583|ref|ZP_05763057.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis CPHL_A]
 gi|260199711|ref|ZP_05767202.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis T46]
 gi|260203872|ref|ZP_05771363.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis K85]
 gi|289442102|ref|ZP_06431846.1| LSU ribosomal protein L3 [Mycobacterium tuberculosis T46]
 gi|289446261|ref|ZP_06436005.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis CPHL_A]
 gi|289552958|ref|ZP_06442168.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis KZN 605]
 gi|289568645|ref|ZP_06448872.1| ribosomal protein L3 [Mycobacterium tuberculosis T17]
 gi|289573309|ref|ZP_06453536.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis K85]
 gi|289744425|ref|ZP_06503803.1| ribosomal protein L3 [Mycobacterium tuberculosis 02_1987]
 gi|289749208|ref|ZP_06508586.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis T92]
 gi|289752748|ref|ZP_06512126.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis EAS054]
 gi|289756789|ref|ZP_06516167.1| ribosomal protein L3 [Mycobacterium tuberculosis T85]
 gi|289760828|ref|ZP_06520206.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis GM 1503]
 gi|294996196|ref|ZP_06801887.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis 210]
 gi|297633200|ref|ZP_06950980.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis KZN 4207]
 gi|297730180|ref|ZP_06959298.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis KZN R506]
 gi|298524192|ref|ZP_07011601.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis 94_M4241A]
 gi|306774812|ref|ZP_07413149.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu001]
 gi|306781456|ref|ZP_07419793.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu002]
 gi|306783353|ref|ZP_07421675.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu003]
 gi|306787722|ref|ZP_07426044.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu004]
 gi|306794489|ref|ZP_07432791.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu005]
 gi|306796455|ref|ZP_07434757.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu006]
 gi|306806525|ref|ZP_07443193.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu007]
 gi|306966722|ref|ZP_07479383.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu009]
 gi|306970914|ref|ZP_07483575.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu010]
 gi|307078644|ref|ZP_07487814.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu011]
 gi|307083208|ref|ZP_07492321.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu012]
 gi|313657507|ref|ZP_07814387.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis KZN V2475]
 gi|42560219|sp|P60441|RL3_MYCBO RecName: Full=50S ribosomal protein L3
 gi|42560220|sp|P60442|RL3_MYCTU RecName: Full=50S ribosomal protein L3
 gi|166233162|sp|A1KGI2|RL3_MYCBP RecName: Full=50S ribosomal protein L3
 gi|166233166|sp|A5U087|RL3_MYCTA RecName: Full=50S ribosomal protein L3
 gi|254803684|sp|C1AL35|RL3_MYCBT RecName: Full=50S ribosomal protein L3
 gi|1806169|emb|CAB06464.1| PROBABLE 50S RIBOSOMAL PROTEIN L3 RPLC [Mycobacterium tuberculosis
           H37Rv]
 gi|13880258|gb|AAK44959.1| ribosomal protein L3 [Mycobacterium tuberculosis CDC1551]
 gi|31617473|emb|CAD93583.1| PROBABLE 50S RIBOSOMAL PROTEIN L3 RPLC [Mycobacterium bovis
           AF2122/97]
 gi|121492270|emb|CAL70737.1| Probable 50S ribosomal protein L3 rplC [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124600080|gb|EAY59090.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis C]
 gi|134149162|gb|EBA41207.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148504628|gb|ABQ72437.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis H37Ra]
 gi|148720433|gb|ABR05058.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis F11]
 gi|224772208|dbj|BAH25014.1| 50S ribosomal protein L3 [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253319147|gb|ACT23750.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis KZN 1435]
 gi|289415021|gb|EFD12261.1| LSU ribosomal protein L3 [Mycobacterium tuberculosis T46]
 gi|289419219|gb|EFD16420.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis CPHL_A]
 gi|289437590|gb|EFD20083.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis KZN 605]
 gi|289537740|gb|EFD42318.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis K85]
 gi|289542399|gb|EFD46047.1| ribosomal protein L3 [Mycobacterium tuberculosis T17]
 gi|289684953|gb|EFD52441.1| ribosomal protein L3 [Mycobacterium tuberculosis 02_1987]
 gi|289689795|gb|EFD57224.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis T92]
 gi|289693335|gb|EFD60764.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis EAS054]
 gi|289708334|gb|EFD72350.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis GM 1503]
 gi|289712353|gb|EFD76365.1| ribosomal protein L3 [Mycobacterium tuberculosis T85]
 gi|298493986|gb|EFI29280.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis 94_M4241A]
 gi|308216702|gb|EFO76101.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu001]
 gi|308325756|gb|EFP14607.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu002]
 gi|308331847|gb|EFP20698.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu003]
 gi|308335634|gb|EFP24485.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu004]
 gi|308337249|gb|EFP26100.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu005]
 gi|308343115|gb|EFP31966.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu006]
 gi|308347002|gb|EFP35853.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu007]
 gi|308355577|gb|EFP44428.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu009]
 gi|308359535|gb|EFP48386.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu010]
 gi|308363440|gb|EFP52291.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu011]
 gi|308367078|gb|EFP55929.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu012]
 gi|323720925|gb|EGB29991.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis CDC1551A]
 gi|326905077|gb|EGE52010.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis W-148]
 gi|328457425|gb|AEB02848.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis KZN 4207]
          Length = 217

 Score =  164 bits (414), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 125/212 (58%), Gaps = 3/212 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   R +PVTV+      V   RT +++GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP--VGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP+ G +++  V+P++ L E R+   D      VG   +   F  G  VDVTG + GKG
Sbjct: 63  NKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKRH F G  A+HG    HR  GS G    P RVFK  +MAGRMG +RVTV NL V
Sbjct: 123 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLV 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             VD + G++L+KG VPG +    ++VR + K
Sbjct: 183 HKVDAENGVLLIKGAVPG-RTGGLVMVRSAIK 213


>gi|295101414|emb|CBK98959.1| LSU ribosomal protein L3P [Faecalibacterium prausnitzii L2-6]
          Length = 210

 Score =  164 bits (414), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 126/212 (59%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT +++  G+ IPVTV+    C VV  +T++ +GY AVQ+G GE   K 
Sbjct: 1   MVKGIIGKKVGMTQLFDESGKVIPVTVIEAGPCTVVQKKTVESDGYQAVQLGFGEVSAKK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F   NV+PKK L EFR++ D   + VG V     F  G  VDV G++ GKG+
Sbjct: 61  VNKAAAGHFKKANVAPKKTLREFRLE-DVSAMNVGDVLKADVFAAGDKVDVVGVSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR+    LR +HG     R  GS G    P RVF  K++ G MG  RVTV+NL VV
Sbjct: 120 QGVIKRYGQHRLRESHGTGPVARHAGSNGSTSTPSRVFPGKRLPGHMGFVRVTVQNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  LI VKG VPG+ K + + + +S K+
Sbjct: 180 KVDTENNLIAVKGAVPGS-KGTIVTLANSVKA 210


>gi|118602213|ref|YP_903428.1| 50S ribosomal protein L3P [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|226730558|sp|A1AVK0|RL3_RUTMC RecName: Full=50S ribosomal protein L3
 gi|118567152|gb|ABL01957.1| LSU ribosomal protein L3P [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 238

 Score =  164 bits (414), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 94/222 (42%), Positives = 135/222 (60%), Gaps = 9/222 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG------ 54
           M  G+V +K+GMT + + +G   PV+V+ ++  ++V  +T+D NGY A+QV  G      
Sbjct: 1   MAMGLVGQKIGMTRLISDDGSITPVSVIKIELNRIVQTKTVDTNGYSAIQVTTGVKVNKK 60

Query: 55  -EAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113
            EAKV  V   ++G ++  +      L+EFRV+ D+  +   +    S F+ G  V+V G
Sbjct: 61  GEAKVHRVPAAIKGHYAKTSQEIGLGLWEFRVEADE--ITDATSVDISLFSAGHYVNVVG 118

Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
            + GKGF G +KRHNF    ATHG SISHR+ GSTG  Q+PGRVFK KKMAG MG  +VT
Sbjct: 119 RSKGKGFQGGVKRHNFQMQDATHGNSISHRAIGSTGQCQEPGRVFKGKKMAGHMGNEQVT 178

Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            + L++V VD +R +I VKG +PGA K    +   S K+ +N
Sbjct: 179 QECLKIVKVDSERNIIFVKGSIPGATKGFVKISLSSKKNKIN 220


>gi|296329220|ref|ZP_06871721.1| 50S ribosomal protein L3 [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296153576|gb|EFG94393.1| 50S ribosomal protein L3 [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 211

 Score =  164 bits (414), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT ++  +G+ +PVTV+      V+  +T +K+GY+A+Q+G  E K KN +
Sbjct: 2   SGILGKKIGMTQIFE-DGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   V P++ + E  V+  D    +G        T    VD+TG + GKG SG
Sbjct: 61  KPLMGIFNKAGVKPQRFVKELEVESVDGY-ELGQEIKVDVLTEVGYVDITGTSKGKGTSG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MK+H F G RA+HGVS +HR  GS G    PG+V K KKMAG+ G   VTV+NL+VV V
Sbjct: 120 VMKKHGFAGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKKMAGQHGNATVTVQNLKVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D +  L+L+KG VPGA KNS+++++ + K  +
Sbjct: 180 DAEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210


>gi|258513640|ref|YP_003189862.1| 50S ribosomal protein L3 [Desulfotomaculum acetoxidans DSM 771]
 gi|257777345|gb|ACV61239.1| ribosomal protein L3 [Desulfotomaculum acetoxidans DSM 771]
          Length = 209

 Score =  164 bits (414), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 131/212 (61%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++  +GR +PVTV+    C VV  +T +++GY AVQ+G GE + + 
Sbjct: 1   MPKGILGKKVGMTQIFTEDGRALPVTVIEAGPCVVVQKKTPEQDGYAAVQLGFGEKRERL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP++G F    V+P + L E RV+ D D   VG       F+ G  VDV G++ GKGF
Sbjct: 61  FNKPLKGHFKKYGVTPMRYLKELRVE-DIDSYEVGQEIKADLFSKGDKVDVVGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNF      HG S  HR  GS G +  P RVFK +K+ G MG  RVTV+NLE+V
Sbjct: 120 AGGIKRHNFHRGPMAHG-SKYHRRPGSLGAK-GPARVFKGRKLPGHMGVERVTVQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R ++ VKG +PG  KN  +++  S K+
Sbjct: 178 KVDAERNILAVKGAIPG-NKNGLVMILTSKKA 208


>gi|282898357|ref|ZP_06306348.1| Ribosomal protein L3 [Raphidiopsis brookii D9]
 gi|281196888|gb|EFA71793.1| Ribosomal protein L3 [Raphidiopsis brookii D9]
          Length = 212

 Score =  164 bits (414), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 88/197 (44%), Positives = 122/197 (61%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT +++  G  IPVTV+    C V   +T   +GY A+QVG GE K K 
Sbjct: 1   MSVGILGTKLGMTQIFDEAGVSIPVTVIKAGPCTVTQVKTQPTDGYCAIQVGYGEVKPKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G  +  +  P + L E+R     D   +G       F+VGQ+VDV G +IG+GF
Sbjct: 61  LNQPKLGHLAKSSAGPVRYLNEYRTDAAGDYA-LGQEIKADIFSVGQIVDVIGTSIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KR+NFG    +HG S +HR+ GS G    PGRV+  K+MAGR+GG+RVTV+ L VV
Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGSRVTVRKLTVV 178

Query: 181 SVDDKRGLILVKGCVPG 197
            VD +R LIL+KG +PG
Sbjct: 179 KVDAERNLILIKGAIPG 195


>gi|156743948|ref|YP_001434077.1| 50S ribosomal protein L3 [Roseiflexus castenholzii DSM 13941]
 gi|189029477|sp|A7NR63|RL3_ROSCS RecName: Full=50S ribosomal protein L3
 gi|156235276|gb|ABU60059.1| ribosomal protein L3 [Roseiflexus castenholzii DSM 13941]
          Length = 210

 Score =  164 bits (414), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 94/213 (44%), Positives = 129/213 (60%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V++  G+ IPVT++ +  C V   RT +++GY AVQ+G  E + K+
Sbjct: 1   MIEGLLGRKIGMTQVFDPTGQVIPVTIIEVGPCVVTQIRTKERDGYEAVQIGYQEVRAKS 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G          + L EFR     D   VG V +   F  GQ VDV G + G+GF
Sbjct: 61  LTKPEQGHLRGAG-KLLRHLREFRTDNIADH-KVGDVLTVEMFAPGQRVDVIGTSKGRGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH FGG   THG S   R+ GS G   DPG ++KN +MAGRMG  RVTV+NL VV
Sbjct: 119 QGVVKRHGFGGGPRTHGQSDRLRAPGSIGAGTDPGHLWKNTRMAGRMGNQRVTVQNLTVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  +R L+LV+G VPGA  N  ++VR + K +
Sbjct: 179 DVVPERNLLLVRGSVPGA-NNGLVMVRRAIKGS 210


>gi|237755896|ref|ZP_04584489.1| 50S ribosomal protein L3 [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691946|gb|EEP60961.1| 50S ribosomal protein L3 [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 226

 Score =  164 bits (414), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/210 (43%), Positives = 129/210 (61%), Gaps = 5/210 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+ + G+ IPVTV+    C VV  RT +K+GY AV +  GE K KN
Sbjct: 1   MPKGIIGKKIGMTRVF-VNGKAIPVTVIQAGPCNVVYTRTQEKDGYNAVALAFGERKEKN 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG-SVFSPSYFTVGQLVDVTGMTIGKG 119
             KP+   F   N+ P K + EF + KD + + +G  +   + F  G LVD+TG + G+G
Sbjct: 60  TPKPLLAIFKKANIKPAKVIKEFPL-KDGETVELGQEIRIENVFEKGDLVDITGKSKGRG 118

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+  MKR +F G   +HG    HR+ GS GCR +PGRV+K K+MAG  G   VTV  LEV
Sbjct: 119 FTSVMKRWDFAGFPKSHGHRY-HRAVGSIGCRTEPGRVWKTKRMAGHYGNETVTVLGLEV 177

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           V +  ++ +ILVKG VPGA  NS + ++ S
Sbjct: 178 VDIIPEKNVILVKGSVPGA-PNSIVFLKQS 206


>gi|313112880|ref|ZP_07798526.1| 50S ribosomal protein L3 [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310624785|gb|EFQ08094.1| 50S ribosomal protein L3 [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 210

 Score =  164 bits (414), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 126/212 (59%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT +++  G+ +PVTV+    C VV  +T++ +GY AVQ+G GE   K 
Sbjct: 1   MVKGIIGKKVGMTQLFDANGKVVPVTVIEAGPCTVVQKKTVESDGYQAVQLGFGEVSAKK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F   NV+PKK L EFR++ D   + VG V     F  G  VDV G++ GKG+
Sbjct: 61  VNKAAAGHFKKANVAPKKTLREFRLE-DVSAMNVGDVLKADVFAEGDKVDVVGVSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR+    LR +HG     R  GS G    P RVF  K++ G MG  RVTV+NL VV
Sbjct: 120 QGVIKRYGQHRLRESHGTGPVARHAGSNGSTSTPARVFPGKRLPGHMGFVRVTVQNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  LI VKG VPG+ K + I + +S K+
Sbjct: 180 KVDTENNLIAVKGAVPGS-KGTIITLANSVKA 210


>gi|219666490|ref|YP_002456925.1| 50S ribosomal protein L3 [Desulfitobacterium hafniense DCB-2]
 gi|219536750|gb|ACL18489.1| ribosomal protein L3 [Desulfitobacterium hafniense DCB-2]
          Length = 209

 Score =  164 bits (414), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/205 (44%), Positives = 124/205 (60%), Gaps = 3/205 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+  EG  IPVTV+    C V+  +T   +GY A+QVG G  + + 
Sbjct: 1   MSKGILGKKVGMTQVFTEEGHLIPVTVVEAGPCYVIQKKTKATDGYNAIQVGFGALRERL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  +V P + + EFRV  D D   +G   +   F  G  VDV G++ GKGF
Sbjct: 61  ANKPQKGHVAKASVKPMRYIREFRVD-DVDAYEIGQEITAEVFAAGDAVDVVGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH  G     HG S  HR  GS G +  P RVFK + + GRMGG RVTV+NL+VV
Sbjct: 120 AGMIKRHGAGRGPMKHG-SKYHRRTGSLGAK-GPARVFKGRNLPGRMGGERVTVQNLKVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWIL 205
            VD  + +ILVKG VPGAKK+  IL
Sbjct: 178 RVDADKNMILVKGAVPGAKKSLLIL 202


>gi|15612697|ref|NP_241000.1| 50S ribosomal protein L3 [Bacillus halodurans C-125]
 gi|7674305|sp|Q9Z9L4|RL3_BACHD RecName: Full=50S ribosomal protein L3
 gi|4512404|dbj|BAA75271.1| rplC homologue (identity of 81% to B. subtilis ) [Bacillus
           halodurans]
 gi|10172746|dbj|BAB03853.1| 50S ribosomal protein L3 [Bacillus halodurans C-125]
          Length = 209

 Score =  164 bits (414), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/212 (45%), Positives = 130/212 (61%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+   G  IPVTV+      V+  +T+D +GY AVQ+G  + K  N
Sbjct: 1   MSKGILGKKVGMTQVFAENGDVIPVTVIEAAPNVVLQKKTVDSDGYEAVQLGFDDQKQNN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    +PK+ + E R    D+   VG       F  G +VDVTG + GKGF
Sbjct: 61  ANKPEKGHAAKAETAPKRFIKEIRGVNLDEF-EVGQEIKVDAFAEGDIVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GA+KRHN      +HG S  HR  GS G   DP RVFK K + GRMGG +VTV+NLE++
Sbjct: 120 AGAIKRHNQARGPMSHG-SRYHRRPGSMGP-VDPNRVFKGKALPGRMGGEQVTVQNLEII 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGAKK S++ VR + KS
Sbjct: 178 KVDAERNLLLVKGNVPGAKK-SYVTVRSAIKS 208


>gi|332041523|gb|EGI77883.1| 50S ribosomal protein L3 [Hylemonella gracilis ATCC 19624]
          Length = 224

 Score =  164 bits (414), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 90/217 (41%), Positives = 128/217 (58%), Gaps = 13/217 (5%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ RK+GM  ++  +G  +PVTV+ + + +V   +T D +GY+A+QV  G  +   V
Sbjct: 6   RLGLLGRKVGMMRLFTDDGDAVPVTVVDVSDNRVTQVKTQDNDGYVALQVTFGSRRASRV 65

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-------LPVGSVFSPSYFTVGQLVDVTGM 114
           +KP  G  +   V   + + EFRV  D          LPV  +F+     VGQ VDV G 
Sbjct: 66  TKPQAGHLAKAGVEAGEIIQEFRVAADTAAKYQAGAKLPVTEIFA-----VGQKVDVQGT 120

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           +IGKGF+G +KRHNF   RA+HG S SH   GS    QDPGRVF  K+M G MG   VT 
Sbjct: 121 SIGKGFAGTIKRHNFSSQRASHGNSRSHNVPGSISMAQDPGRVFPGKRMTGHMGDETVTT 180

Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +NL+V+ +D+ R L+L+KG VPG+    ++ VR + K
Sbjct: 181 QNLDVIRIDEARQLLLIKGAVPGS-AGGFVTVRPAVK 216


>gi|227549826|ref|ZP_03979875.1| 50S ribosomal protein L3 [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078081|gb|EEI16044.1| 50S ribosomal protein L3 [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 218

 Score =  164 bits (414), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 87/213 (40%), Positives = 122/213 (57%), Gaps = 2/213 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT +++ + R IPVTV+      V   RT + +GY A+Q+  G+   +   K
Sbjct: 8   GILGTKLGMTQIFDEDNRVIPVTVVEAGPVVVTQIRTAETDGYSAIQIAYGDIDPRKTKK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ + E R+  D     VG  F+ + F     VDV G T GKG++GA
Sbjct: 68  PQAGHFKKAGVNPRRHVAEIRMD-DTSAYEVGQEFNATIFDGDTYVDVVGTTKGKGYAGA 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G  A+HG   +HR  GS G    PGRVFK  +MAGRMG NRVT +NL++  +D
Sbjct: 127 MKRHGFAGQGASHGNQAAHRRVGSIGACATPGRVFKGTRMAGRMGSNRVTTQNLKIQRID 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
               LIL+KG +PG  K S + V+ + K   + 
Sbjct: 187 GDNNLILIKGAIPGV-KGSIVTVKTAVKGGAHA 218


>gi|188575490|ref|YP_001912419.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188519942|gb|ACD57887.1| ribosomal protein L3 [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 207

 Score =  163 bits (413), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/209 (44%), Positives = 128/209 (61%), Gaps = 4/209 (1%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           + RK GM+ ++  +GR +PVT++     ++   +T++ +GY AVQ+  G  +   V+KP 
Sbjct: 1   MGRKAGMSRIFTEDGRSVPVTLIEATPNRIAQIKTVEVDGYSAVQITVGARRAALVNKPA 60

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
            G F+   V   + L+EFRV+ D  L    VG       F VGQ VDV G+T GKGF G 
Sbjct: 61  AGHFAKAKVEAGRGLWEFRVE-DAHLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQGT 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR+NF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  + + +NLEVV VD
Sbjct: 120 IKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVKVD 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +RGLI + G VPGA     ++VR + K+
Sbjct: 180 VERGLIAIHGAVPGAAGGD-VIVRPASKA 207


>gi|227497181|ref|ZP_03927429.1| ribosomal protein L3 [Actinomyces urogenitalis DSM 15434]
 gi|226833312|gb|EEH65695.1| ribosomal protein L3 [Actinomyces urogenitalis DSM 15434]
          Length = 222

 Score =  163 bits (413), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 88/205 (42%), Positives = 124/205 (60%), Gaps = 2/205 (0%)

Query: 9   KLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGF 68
           KLGMT +++  G   PVTV+ +D   V   RT++ +GY AVQ+  GE   + V+KP+ G 
Sbjct: 20  KLGMTQIWDENGVLRPVTVVRVDTNVVTQVRTIETDGYEAVQLAFGEIAERKVTKPLAGH 79

Query: 69  FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
           F+   V+P++ + E R     +    G   +   F VGQ VDV G + GKGF+G MKRH 
Sbjct: 80  FAKAGVAPRRHVAEVRTSLASEF-EAGQELTADLFEVGQKVDVQGTSKGKGFAGVMKRHG 138

Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188
           F G+ A+HG   +HR  GS G    PGR+FK  +MAGRMG    TV+NL+V  VD ++G+
Sbjct: 139 FAGVSASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGHETTTVQNLKVRGVDVEKGV 198

Query: 189 ILVKGCVPGAKKNSWILVRDSFKSA 213
           +LV G +PG  K S ++VR + K A
Sbjct: 199 LLVNGAIPG-PKGSVVVVRTAVKGA 222


>gi|251772490|gb|EES53056.1| Ribosomal protein L3 [Leptospirillum ferrodiazotrophum]
          Length = 204

 Score =  163 bits (413), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 88/204 (43%), Positives = 125/204 (61%), Gaps = 3/204 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++  K+GMT +Y   G+ IPVTV+ +  C+V+  +T +K+ Y AVQ+G G  K  +++KP
Sbjct: 4   IIGEKIGMTQIYLPNGKSIPVTVVKVGPCEVIQVKTKEKDRYSAVQLGYGIVKPVSLNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           +RG F   + +  + + E  +  D    P GS++   +F  G+LV  TGMT GKGF+G M
Sbjct: 64  LRGHFQKYSQNTYRTIREVVILGDPP--PSGSIYGADFFKPGELVSATGMTKGKGFAGVM 121

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH+F G  ATHG S+ HR  GS G    P RV KNKK+ G MG  +VT+KNLEVV V  
Sbjct: 122 KRHHFRGGDATHG-SMFHREPGSIGSSAYPSRVLKNKKLPGHMGHKKVTIKNLEVVEVKA 180

Query: 185 KRGLILVKGCVPGAKKNSWILVRD 208
           +  L+L+KG VPG      +  +D
Sbjct: 181 EANLVLLKGAVPGHPGTILVFKKD 204


>gi|312140918|ref|YP_004008254.1| 50S ribosomal protein l3 rplc [Rhodococcus equi 103S]
 gi|325675444|ref|ZP_08155128.1| 50S ribosomal protein L3 [Rhodococcus equi ATCC 33707]
 gi|311890257|emb|CBH49575.1| 50S ribosomal protein L3 RplC [Rhodococcus equi 103S]
 gi|325553415|gb|EGD23093.1| 50S ribosomal protein L3 [Rhodococcus equi ATCC 33707]
          Length = 217

 Score =  163 bits (413), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 88/213 (41%), Positives = 124/213 (58%), Gaps = 2/213 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      V   RT +++GY AVQ+  G    + V+K
Sbjct: 7   GILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQIRTEERDGYSAVQLAFGAIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V+P++ + E RV  D     VG   +   F  G  VDVTG + GKGF+G 
Sbjct: 67  PTSGQFAKAGVTPRRHVVELRV-ADTSEYEVGQELTAEVFEDGAYVDVTGTSKGKGFAGT 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G  A+HG    HR  GS G    PGRVFK  +M+GRMG +R+T +NL V  VD
Sbjct: 126 MKRHGFAGQGASHGAQAVHRRPGSIGGCATPGRVFKGMRMSGRMGSDRITTQNLSVHKVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            + GL+L+KG +PG +K   ++V+ + K   + 
Sbjct: 186 AENGLLLIKGAIPG-RKGGLVIVKTAVKGGASA 217


>gi|304315940|ref|YP_003851085.1| 50S ribosomal protein L3 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777442|gb|ADL68001.1| 50S ribosomal protein L3 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 209

 Score =  163 bits (413), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 94/212 (44%), Positives = 129/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K GMT ++ +    IPVTV+    C VV  +T + +GY A+QVG G+ K K 
Sbjct: 1   MKKAILGKKHGMTQIF-VGNEMIPVTVVEAGPCVVVQKKTKENDGYDAIQVGFGDVKEKR 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + KP++G F+  NV  KK L EFR+  D     VGS      F+VG  VDV G + GKGF
Sbjct: 60  LIKPLKGHFTKANVPFKKYLREFRLD-DISSYEVGSEIKADIFSVGDRVDVIGTSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR+N       HG S  HR  GS G   DP R FK K++ G MG  RVTV+NLEVV
Sbjct: 119 AGVVKRYNANRGPMAHG-SKYHRRPGSMGASSDPSRTFKGKRLPGHMGNERVTVQNLEVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD ++ L+L+KG VPG  + S +++RD+ KS
Sbjct: 178 KVDPEKNLLLIKGSVPGI-RGSLLMIRDTVKS 208


>gi|300814637|ref|ZP_07094888.1| 50S ribosomal protein L3 [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|300511256|gb|EFK38505.1| 50S ribosomal protein L3 [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 209

 Score =  163 bits (413), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/209 (44%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RK+GMT +++ +G   PV+V+ ++   V   +T + +GY A+Q+ AG  K   V+KP
Sbjct: 4   LIGRKIGMTQIFDEKGIVTPVSVIEVEPNIVTQKKTSENDGYSAIQISAGAVKENKVNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
            +G F    VS KK L EF +  D D   +G       F VG+ VDV G + GKG +G +
Sbjct: 64  TKGHFDKAGVSYKKYLSEF-LTDDVDSYNLGDEIKVDIFEVGEHVDVIGTSKGKGTAGII 122

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH FG  R THG S  HR  G  G    PG+VFKN +MAG+MG  RVTV+NLE+V +D 
Sbjct: 123 KRHGFGRGRETHG-SKFHRMPGGMGAASYPGKVFKNHRMAGKMGNERVTVQNLEIVRIDA 181

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            + LILVKG +PG KK S + V+++ K A
Sbjct: 182 SKNLILVKGAIPGNKK-SKVFVKETVKKA 209


>gi|282882468|ref|ZP_06291089.1| 50S ribosomal protein L3 [Peptoniphilus lacrimalis 315-B]
 gi|281297610|gb|EFA90085.1| 50S ribosomal protein L3 [Peptoniphilus lacrimalis 315-B]
          Length = 209

 Score =  163 bits (413), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/209 (44%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RK+GMT +++ +G   PV+V+ ++   V   +T + +GY A+Q+ AG  K   V+KP
Sbjct: 4   LIGRKIGMTQIFDEKGIVTPVSVIEVEPNIVTQKKTPENDGYSAIQISAGAVKENKVNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
            +G F    VS KK L EF +  D D   +G       F VG+ VDV G + GKG +G +
Sbjct: 64  TKGHFDKAGVSYKKYLSEF-LTDDVDSYNLGDEIKVDIFEVGEHVDVIGTSKGKGTAGII 122

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH FG  R THG S  HR  G  G    PG+VFKN +MAG+MG  RVTV+NLE+V +D 
Sbjct: 123 KRHGFGRGRETHG-SKFHRMPGGMGAASYPGKVFKNHRMAGKMGNERVTVQNLEIVRIDA 181

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            + LILVKG +PG KK S + V+++ K A
Sbjct: 182 SKNLILVKGAIPGNKK-SKVFVKETVKKA 209


>gi|307154842|ref|YP_003890226.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 7822]
 gi|306985070|gb|ADN16951.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 7822]
          Length = 212

 Score =  163 bits (413), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 89/202 (44%), Positives = 120/202 (59%), Gaps = 3/202 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT +++ E G  IPVTV+H   C +   +T + +GY ++Q+G GE K K
Sbjct: 1   MSVGIIGTKLGMTQIFDKETGIAIPVTVIHAGPCPITQIKTPETDGYSSIQIGYGEVKEK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++KP+ G        P K L E+R+   +    +G       F  G +VDV G TIG+G
Sbjct: 61  ALNKPLLGHLKKSESIPLKNLKEYRLDNPEQYQ-LGDALKVDIFQPGDIVDVAGKTIGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G  KRHNF     THG S +HR  GSTG    PGRV+  K+MAGR GG +VT++ L V
Sbjct: 120 FAGYQKRHNFKRGSMTHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGRYGGTQVTIRKLTV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKN 201
           V VD +R LIL+KG VPG   N
Sbjct: 179 VQVDPERNLILIKGAVPGKPGN 200


>gi|19704966|ref|NP_602461.1| 50S ribosomal protein L3 [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|42559658|sp|Q8RIF5|RL3_FUSNN RecName: Full=50S ribosomal protein L3
 gi|19712868|gb|AAL93760.1| LSU ribosomal protein L3P [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 211

 Score =  163 bits (413), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT ++  +G+ +PVTV+      V+  +T +K+GY+A+Q+G  E K KN +
Sbjct: 2   SGILGKKIGMTQIFE-DGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   V P++ + E  V+  D    +G        T    VD+TG + GKG SG
Sbjct: 61  KPLMGIFNKAGVKPQRFVKELEVESVDGY-ELGQEIKVDVLTEVGYVDITGTSKGKGTSG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MK+H F G RA+HGVS +HR  GS G    PG+V K KKMAG+ G   VTV+NL+VV V
Sbjct: 120 VMKKHGFSGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKKMAGQHGNATVTVQNLKVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D +  L+L+KG VPGA KNS+++++ + K  +
Sbjct: 180 DAEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210


>gi|51894210|ref|YP_076901.1| 50S ribosomal protein L3 [Symbiobacterium thermophilum IAM 14863]
 gi|81826004|sp|Q67JU3|RL3_SYMTH RecName: Full=50S ribosomal protein L3
 gi|51857899|dbj|BAD42057.1| 50S ribosomal protein L3 [Symbiobacterium thermophilum IAM 14863]
          Length = 216

 Score =  163 bits (413), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/209 (46%), Positives = 132/209 (63%), Gaps = 4/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +KLGMT ++  +G+ IPVTV+    C VV  +T   +GY AVQ+G GE +   
Sbjct: 1   MQKGILGKKLGMTQIFAPDGKIIPVTVVEAGPCVVVQKKTTATDGYNAVQLGFGEIRETL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F    V   + L EFR+  D + L VG V     F  G+LVDVTG++ GKGF
Sbjct: 61  VNKPLKGHFEKHQVKATRYLREFRLD-DVESLNVGDVIKADIFAEGELVDVTGISRGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF    ++HG S  HR  GS G R+   RV K +K+ GR+GG RVTV  L VV
Sbjct: 120 AGGVKRWNFNRGPSSHG-SKYHRRPGSLGQRRW-ARVPKGRKLPGRLGGERVTVLGLRVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            VD ++ LIL+KG VPGA K S I +RDS
Sbjct: 178 KVDPEKNLILIKGAVPGA-KGSLITIRDS 205


>gi|257453271|ref|ZP_05618570.1| 50S ribosomal protein L3P [Fusobacterium sp. 3_1_5R]
 gi|257467134|ref|ZP_05631445.1| 50S ribosomal protein L3P [Fusobacterium gonidiaformans ATCC 25563]
 gi|315918265|ref|ZP_07914505.1| LSU ribosomal protein L3P [Fusobacterium gonidiaformans ATCC 25563]
 gi|317059805|ref|ZP_07924290.1| LSU ribosomal protein L3P [Fusobacterium sp. 3_1_5R]
 gi|313685481|gb|EFS22316.1| LSU ribosomal protein L3P [Fusobacterium sp. 3_1_5R]
 gi|313692140|gb|EFS28975.1| LSU ribosomal protein L3P [Fusobacterium gonidiaformans ATCC 25563]
          Length = 208

 Score =  163 bits (413), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 89/209 (42%), Positives = 133/209 (63%), Gaps = 3/209 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++A+K+GMT ++  +G+ +PVTV+      V+  +T + +GY A+Q+G  E K KN +
Sbjct: 2   SGILAKKIGMTQIFE-DGKFVPVTVVEAGPNYVLQKKTEESDGYTALQLGFDEKKEKNTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   V P++ + E +V   +    +G       F+  + VD+TG + GKG +G
Sbjct: 61  KPLMGIFNKAGVKPQRFVRELKVDSVEGY-ELGQEIKVDVFSEVEYVDITGTSKGKGTAG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGG RATHGVS +HR  GS G    PG+V K  +MAGR G   VTV+NL+VV V
Sbjct: 120 VMKRHGFGGNRATHGVSRNHRLGGSIGQSSWPGKVLKGLRMAGRHGNATVTVQNLKVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D +  L+L+KG VPGA KN +++++ + K
Sbjct: 180 DAENNLLLIKGAVPGA-KNGYLVIKPAIK 207


>gi|19551746|ref|NP_599748.1| 50S ribosomal protein L3 [Corynebacterium glutamicum ATCC 13032]
 gi|62389401|ref|YP_224803.1| 50S ribosomal protein L3 [Corynebacterium glutamicum ATCC 13032]
 gi|145294657|ref|YP_001137478.1| 50S ribosomal protein L3 [Corynebacterium glutamicum R]
 gi|42559652|sp|Q8NT09|RL3_CORGL RecName: Full=50S ribosomal protein L3
 gi|166233137|sp|A4QBH9|RL3_CORGB RecName: Full=50S ribosomal protein L3
 gi|21323271|dbj|BAB97899.1| Ribosomal protein L3 [Corynebacterium glutamicum ATCC 13032]
 gi|41324735|emb|CAF19217.1| 50S RIBOSOMAL PROTEIN L3 [Corynebacterium glutamicum ATCC 13032]
 gi|140844577|dbj|BAF53576.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 218

 Score =  163 bits (413), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 87/215 (40%), Positives = 127/215 (59%), Gaps = 6/215 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT +++ E R IPVTV+    C V   RT++ +GY A+Q+  GE   + V++
Sbjct: 8   GILGTKLGMTQIFDEENRVIPVTVVEAGPCVVSQIRTVETDGYNAIQIAYGEIDPRKVNQ 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           P+ G F    V+P++ + E R+   DD+    VG   +   F   + VDVTG T GKG++
Sbjct: 68  PLTGHFKKAGVTPRRHVTEIRM---DDVSGYEVGQDVTVEIFNDIKFVDVTGTTKGKGYA 124

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           GAMKRH F G  A HG   +HR  G  G    PGR+FK K+MAGRMG +RVT +NL+V  
Sbjct: 125 GAMKRHGFAGQGAGHGNQAAHRRVGGIGAAATPGRIFKGKRMAGRMGNDRVTTQNLKVQK 184

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           +D    +IL+KG +PG  +   + V+ + K   + 
Sbjct: 185 IDADANIILIKGAIPG-NRGGIVTVKTAVKGGAHA 218


>gi|256027490|ref|ZP_05441324.1| 50S ribosomal protein L3P [Fusobacterium sp. D11]
 gi|260495203|ref|ZP_05815331.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_33]
 gi|289765452|ref|ZP_06524830.1| LSU ribosomal protein L3P [Fusobacterium sp. D11]
 gi|260197260|gb|EEW94779.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_33]
 gi|289717007|gb|EFD81019.1| LSU ribosomal protein L3P [Fusobacterium sp. D11]
          Length = 211

 Score =  163 bits (413), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT ++  +G+ +PVTV+      V+  +T +K+GY+A+Q+G  E K KN +
Sbjct: 2   SGILGKKIGMTQIFE-DGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   V P++ + E  V+  D    +G             VD+TG + GKG SG
Sbjct: 61  KPLMGIFNKAGVKPQRFVKELAVESVDGY-ELGQEIKVDVLAEVGYVDITGTSKGKGTSG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGG RA+HGVS +HR  GS G    PG+V K K+MAG+ G   VTV+NL+VV V
Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D +  L+L+KG VPGA KNS+++++ + K  +
Sbjct: 180 DAEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210


>gi|288801098|ref|ZP_06406554.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 299 str. F0039]
 gi|288332032|gb|EFC70514.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 299 str. F0039]
          Length = 204

 Score =  163 bits (413), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 86/205 (41%), Positives = 126/205 (61%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V++ +G+ IP TV+    C V   +T++K+GY AVQ+G GEAK  N +K
Sbjct: 3   GLIGRKIGMTSVFSADGKNIPCTVIEAGPCVVTQVKTIEKDGYKAVQLGFGEAKESNTNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           PM G F     +PKK L EF+  ++ +L   G   +   F     VDV G + GKGF G 
Sbjct: 63  PMMGTFKKAGTTPKKHLAEFKFDEEYNL---GDTITVELFNDANFVDVVGTSKGKGFQGV 119

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ ++THG     R  GS G    P +VFK  +MAG+MGG+RVT +NL+V+ V
Sbjct: 120 IKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLKVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  ++LVKG V G   ++ ++ +
Sbjct: 180 IPEHNILLVKGSVAGCNGSTLLIEK 204


>gi|164686527|ref|ZP_02210555.1| hypothetical protein CLOBAR_00094 [Clostridium bartlettii DSM
           16795]
 gi|164604396|gb|EDQ97861.1| hypothetical protein CLOBAR_00094 [Clostridium bartlettii DSM
           16795]
          Length = 209

 Score =  163 bits (413), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/210 (44%), Positives = 131/210 (62%), Gaps = 4/210 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++   G  IPVTV+      V   +T + +GY A+QVG  +AK K+++K
Sbjct: 3   GILGKKIGMTQIFTEHGEVIPVTVVEAGPVVVTQIKTTENDGYTAIQVGFQDAKEKSLNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G  ++ N + KK L EFRV   ++   VG       F  G+L+DVTG++ GKGF G 
Sbjct: 63  PQKGHLAAAN-TLKKHLKEFRVDSVEEYT-VGQEIKADLFAAGELIDVTGISKGKGFQGP 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KRH       THG S  HR  GS G    PGRVFKNKK+AG MG  +VTV+NLEVV VD
Sbjct: 121 IKRHGQSRGPETHG-SRYHRRPGSMGACSYPGRVFKNKKLAGHMGSVKVTVQNLEVVRVD 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             +  ILVKG +PGA K S + ++++ K++
Sbjct: 180 ADKNFILVKGAIPGA-KGSVVTIKEAVKAS 208


>gi|119773354|ref|YP_926094.1| 50S ribosomal protein L3 [Shewanella amazonensis SB2B]
 gi|166234590|sp|A1S218|RL3_SHEAM RecName: Full=50S ribosomal protein L3
 gi|119765854|gb|ABL98424.1| LSU ribosomal protein L3P [Shewanella amazonensis SB2B]
          Length = 212

 Score =  163 bits (413), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/206 (44%), Positives = 124/206 (60%), Gaps = 1/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKTLENDGYRALQVTTGAKKAHR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV-FSPSYFTVGQLVDVTGMTIGKG 119
           V+KP  G F+   V   + L+E R+ + +          +   F   Q VDVTG + GKG
Sbjct: 61  VTKPEAGHFAKAGVEAGRGLWEMRLGEGEGEGIEVGAELNVEIFADVQKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF     THG S+SHR++GS G  Q PGRVFK KKM+G MG  RVT +NL+V
Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLSHRANGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205
           V VD +R L+LVKG VPGA     I+
Sbjct: 181 VRVDVERNLLLVKGAVPGATNGDLII 206


>gi|269925831|ref|YP_003322454.1| ribosomal protein L3 [Thermobaculum terrenum ATCC BAA-798]
 gi|269789491|gb|ACZ41632.1| ribosomal protein L3 [Thermobaculum terrenum ATCC BAA-798]
          Length = 204

 Score =  163 bits (413), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/198 (46%), Positives = 122/198 (61%), Gaps = 5/198 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT +++  GR +PVTV+      V   +T +++GY AVQ+G  E  VK 
Sbjct: 1   MVEGLIGKKIGMTHIFDENGRFVPVTVIQAGPNFVTFIKTKERDGYEAVQLGFEE--VKK 58

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + KP RG     N+ P + L EF+     +L  VG     S F  G+ VDVTG + GKGF
Sbjct: 59  LKKPERGHLK--NLPPLRHLREFKADNISEL-QVGQKVDASIFQAGEKVDVTGTSKGKGF 115

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH FGG   THG S  HR+ GS G    PG+V K ++MAGR GG RVTVK L VV
Sbjct: 116 TGVVKRHGFGGGPKTHGQSDRHRAPGSIGATTTPGKVLKGQRMAGRAGGERVTVKRLTVV 175

Query: 181 SVDDKRGLILVKGCVPGA 198
           +VD  R L+LVKG VPGA
Sbjct: 176 AVDTDRNLLLVKGAVPGA 193


>gi|111023096|ref|YP_706068.1| 50S ribosomal protein L3 [Rhodococcus jostii RHA1]
 gi|226365595|ref|YP_002783378.1| 50S ribosomal protein L3 [Rhodococcus opacus B4]
 gi|123339772|sp|Q0S3H6|RL3_RHOSR RecName: Full=50S ribosomal protein L3
 gi|254803687|sp|C1B012|RL3_RHOOB RecName: Full=50S ribosomal protein L3
 gi|110822626|gb|ABG97910.1| 50S ribosomal protein L3 [Rhodococcus jostii RHA1]
 gi|226244085|dbj|BAH54433.1| 50S ribosomal protein L3 [Rhodococcus opacus B4]
          Length = 218

 Score =  163 bits (412), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/208 (42%), Positives = 123/208 (59%), Gaps = 2/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      V   RT +++GY AVQ+  G    + V+K
Sbjct: 8   GILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQIRTEERDGYSAVQLAFGAIDPRKVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V+P++ + E RV  D     VG   +   F  G  VDVTG + GKGF+G 
Sbjct: 68  PTSGQFAKAGVTPRRHVVELRV-ADTSEYEVGQELTAEVFEDGAYVDVTGTSKGKGFAGT 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G  A+HG    HR  GS G    PGRVFK  +M+GRMG +R+T +NL V  VD
Sbjct: 127 MKRHGFAGQGASHGAQAVHRRPGSIGGCATPGRVFKGMRMSGRMGSDRITTQNLSVHKVD 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            + GL+L+KG +PG +K   ++V+ + K
Sbjct: 187 AENGLLLIKGAIPG-RKGGLVIVKSAVK 213


>gi|288554725|ref|YP_003426660.1| 50S ribosomal protein L3 [Bacillus pseudofirmus OF4]
 gi|288545885|gb|ADC49768.1| 50S ribosomal protein L3 [Bacillus pseudofirmus OF4]
          Length = 208

 Score =  163 bits (412), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/212 (45%), Positives = 129/212 (60%), Gaps = 5/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+  +   V+  +T++ +GY A+Q+G  + K  N
Sbjct: 1   MTKGILGRKIGMTQVFAENGEVIPVTVIEAEPNVVLQKKTVESDGYEAIQIGFADQKKSN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP  G  +  N +PK+ + E R    D  L VG+      FT G +VDVTG + GKGF
Sbjct: 61  TNKPQEGHAAKANTAPKRFMKEIR--NFDASLEVGNEVKVDTFTAGDVVDVTGTSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRHN      +HG S  HR  GS G    P RVFK K + GRMGG  VTV+NLE+V
Sbjct: 119 QGAIKRHNQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGETVTVQNLEIV 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  R L+LVKG VPGAKK S++ V+ + K+
Sbjct: 177 KVDTDRNLLLVKGNVPGAKK-SYVSVQSAVKA 207


>gi|257463961|ref|ZP_05628346.1| 50S ribosomal protein L3P [Fusobacterium sp. D12]
 gi|317061484|ref|ZP_07925969.1| LSU ribosomal protein L3P [Fusobacterium sp. D12]
 gi|313687160|gb|EFS23995.1| LSU ribosomal protein L3P [Fusobacterium sp. D12]
          Length = 208

 Score =  163 bits (412), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/209 (43%), Positives = 132/209 (63%), Gaps = 3/209 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++A+K+GMT ++  +G+ +PVTV+      V+  +T + +GY A+Q+G  E K KN +
Sbjct: 2   SGILAKKIGMTQIFE-DGKFVPVTVVEAGPNYVLQKKTEETDGYTALQLGFDEKKEKNTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   V P++ + E +V   +    +G       F+  + VD+TG + GKG SG
Sbjct: 61  KPLMGIFNKAGVKPQRFVRELKVDSVEGY-ELGQEIKVDVFSEVEYVDITGTSKGKGTSG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGG RATHGVS +HR  GS G    PG+V K  +MAGR G   VTV+NL+VV V
Sbjct: 120 VMKRHGFGGNRATHGVSRNHRLGGSIGQSSWPGKVLKGLRMAGRHGNATVTVQNLKVVRV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D    L+L+KG VPGA KN +++++ + K
Sbjct: 180 DADNNLLLIKGAVPGA-KNGYLVIKPAIK 207


>gi|262199869|ref|YP_003271078.1| 50S ribosomal protein L3 [Haliangium ochraceum DSM 14365]
 gi|262083216|gb|ACY19185.1| 50S ribosomal protein L3 [Haliangium ochraceum DSM 14365]
          Length = 243

 Score =  163 bits (412), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/216 (42%), Positives = 131/216 (60%), Gaps = 4/216 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR G++ +KLGMT V+  +G RIPVTV+      VV  RT +++GY A+ VG GE   + 
Sbjct: 3   MRMGILGKKLGMTQVFAEDGERIPVTVIQTGPNYVVGKRTEERDGYSALVVGFGEKPARL 62

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSY-FTVGQLVDVTGMTIGK 118
            +KP+ G F +  V P +   EFR+  D+     VG     S  F  G  +DVTG + GK
Sbjct: 63  ANKPLAGQFKN-GVKPPRMQREFRLPADEVAKYEVGQELKISEVFEAGIPLDVTGTSKGK 121

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           G+ G MKRHN  G +A+HGV    R  GS GCR  PGRV K K+M+GRMGG R TV+NL+
Sbjct: 122 GYQGVMKRHNMSGTKASHGVHEYFRHGGSIGCRLTPGRVHKGKRMSGRMGGERKTVQNLQ 181

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           +V + ++   +LV+G +PG  +  ++++R +   AV
Sbjct: 182 LVQILEEDNAVLVRGAIPGPNQ-GYVMLRKAATRAV 216


>gi|78221846|ref|YP_383593.1| 50S ribosomal protein L3 [Geobacter metallireducens GS-15]
 gi|109893431|sp|Q39Y06|RL3_GEOMG RecName: Full=50S ribosomal protein L3
 gi|78193101|gb|ABB30868.1| LSU ribosomal protein L3P [Geobacter metallireducens GS-15]
          Length = 210

 Score =  163 bits (412), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/220 (43%), Positives = 134/220 (60%), Gaps = 19/220 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52
           M+ G++A+KLGMT ++  +GRRIPVTV+    C V+  +T++ +GY A+QVG        
Sbjct: 1   MKKGLIAKKLGMTQIFADDGRRIPVTVVEAGPCIVLQKKTVETDGYNAIQVGFLAKDADK 60

Query: 53  AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
           +G A V +     +G F+ +         EFRV+ D D   +G   +   F  G  VDVT
Sbjct: 61  SGRALVGHCKSAGQGVFTYIR--------EFRVE-DVDRYTIGDSITAEIFAPGDYVDVT 111

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G +IGKGF G +KR  F G R++HG S  HR+ GS G    P RVFKNKKM G++G  RV
Sbjct: 112 GTSIGKGFQGVIKRWGFRGGRSSHG-SCFHRAPGSIGSSAWPSRVFKNKKMPGQLGNERV 170

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           TV+ L+VV VD    L+L++G +PGA KN  +L++DS K+
Sbjct: 171 TVQRLQVVRVDTADNLLLIRGAIPGA-KNGILLLKDSVKA 209


>gi|304413145|ref|ZP_07394618.1| 50S ribosomal subunit protein L3 [Candidatus Regiella insecticola
           LSR1]
 gi|304283988|gb|EFL92381.1| 50S ribosomal subunit protein L3 [Candidatus Regiella insecticola
           LSR1]
          Length = 258

 Score =  163 bits (412), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 94/219 (42%), Positives = 125/219 (57%), Gaps = 25/219 (11%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT V+  EG  IPVTV+ ++  +V   + +  +GY AVQV  G+ K   + K
Sbjct: 28  GLIGKKLGMTRVFTEEGVSIPVTVIEIEKNRVTQVKDIKTDGYCAVQVTTGQKKTSRLKK 87

Query: 64  PMRGFFSSVN------------------------VSPKKKLFEFRVQKDDDLLPVGSVFS 99
           P RG F                            V+  + L+EFR+ +D   L  G   +
Sbjct: 88  PQRGHFEGTKTIRSKRATLDNPEIIKEVLTSKDPVTAGRGLWEFRIAEDQKFLR-GEEIT 146

Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
              F   + VDVTG + GKGF+G +KR NF    ATHG S+SHR+ GS G  Q PG+VFK
Sbjct: 147 VEIFADVKKVDVTGTSKGKGFAGVVKRWNFRTQDATHGNSLSHRAPGSIGQNQTPGKVFK 206

Query: 160 NKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGA 198
            KKMAG +G  RVTV++L+VV VD KR L+LVKG VPGA
Sbjct: 207 GKKMAGHLGDERVTVQSLDVVRVDAKRNLLLVKGAVPGA 245


>gi|25027078|ref|NP_737132.1| 50S ribosomal protein L3 [Corynebacterium efficiens YS-314]
 gi|259506793|ref|ZP_05749693.1| 50S ribosomal protein L3 [Corynebacterium efficiens YS-314]
 gi|42559646|sp|Q8FS80|RL3_COREF RecName: Full=50S ribosomal protein L3
 gi|23492358|dbj|BAC17332.1| putative 50S ribosomal protein L3 [Corynebacterium efficiens
           YS-314]
 gi|259165664|gb|EEW50218.1| 50S ribosomal protein L3 [Corynebacterium efficiens YS-314]
          Length = 218

 Score =  163 bits (412), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 87/215 (40%), Positives = 127/215 (59%), Gaps = 6/215 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT +++ E R IPVTV+    C V   RT++ +GY A+Q+  GE   + V++
Sbjct: 8   GILGTKLGMTQIFDEENRVIPVTVVEAGPCVVSQIRTVETDGYNAIQIAYGEIDPRKVNQ 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           P+ G F    V+P++ + E R+   DD+    VG   +   F   + VDVTG + GKG++
Sbjct: 68  PLTGHFKKAGVTPRRHVTEIRM---DDVSGYEVGQDVTVEIFNDVKFVDVTGTSKGKGYA 124

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           GAMKRH F G  A HG   +HR  G  G    PGR+FK K+MAGRMG +RVT +NL+V  
Sbjct: 125 GAMKRHGFAGQGAGHGNQAAHRRVGGIGAAATPGRIFKGKRMAGRMGNDRVTTQNLKVQK 184

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           +D    LIL+KG +PG  +   + V+ + K   + 
Sbjct: 185 IDADANLILIKGAIPG-NRGGIVTVKTAVKGGAHA 218


>gi|52840574|ref|YP_094373.1| 50S ribosomal protein L3 [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|54296365|ref|YP_122734.1| 50S ribosomal protein L3 [Legionella pneumophila str. Paris]
 gi|148361053|ref|YP_001252260.1| 50S ribosomal protein L3 [Legionella pneumophila str. Corby]
 gi|81822648|sp|Q5X859|RL3_LEGPA RecName: Full=50S ribosomal protein L3
 gi|81823474|sp|Q5ZYP3|RL3_LEGPH RecName: Full=50S ribosomal protein L3
 gi|166233152|sp|A5IHR4|RL3_LEGPC RecName: Full=50S ribosomal protein L3
 gi|52627685|gb|AAU26426.1| 50S ribosomal protein L3 [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|53750150|emb|CAH11542.1| 50S ribosomal subunit protein L3 [Legionella pneumophila str.
           Paris]
 gi|148282826|gb|ABQ56914.1| 50S ribosomal protein L3 [Legionella pneumophila str. Corby]
          Length = 216

 Score =  163 bits (412), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/198 (45%), Positives = 122/198 (61%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  EG  +PV+V+ +   +V   +T   +GY AVQ+  G  K   
Sbjct: 1   MMIGLLGRKIGMTRVFTPEGVSVPVSVVEVQPNRVSQVKTAANDGYSAVQLTGGTKKSSK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKP+ G F+   +       EFR+  +D   P   +     FT GQ VDV+G+T GKGF
Sbjct: 61  VSKPVAGHFAKAQIDAGDMQVEFRIDSEDAFTPGQVISVADVFTAGQYVDVSGLTKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNF    A+HG S SHR  GS G  Q PGRVFK KKMAG MG  R T+++LE+V
Sbjct: 121 AGTVKRHNFRTQDASHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNARCTIQSLELV 180

Query: 181 SVDDKRGLILVKGCVPGA 198
            VD +R L+L+KG +PGA
Sbjct: 181 KVDSERNLLLIKGAIPGA 198


>gi|218885187|ref|YP_002434508.1| 50S ribosomal protein L3 [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|226725164|sp|B8DN96|RL3_DESVM RecName: Full=50S ribosomal protein L3
 gi|218756141|gb|ACL07040.1| ribosomal protein L3 [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 209

 Score =  163 bits (412), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/204 (45%), Positives = 122/204 (59%), Gaps = 2/204 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT ++  +G  + VTV+    C V+  R  + +GY AVQ+   EAK K+V+K
Sbjct: 6   GILGRKVGMTRIFASDGSAVAVTVIQAGPCPVIQVRNGETDGYDAVQIAFEEAKEKHVTK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P RG F+       + L E R++   +   VG   + S F  G+ V VTG +IGKG+ G 
Sbjct: 66  PARGHFAKAGKGLFRNLREIRLEAPAEF-EVGQELTVSLFAAGEKVKVTGTSIGKGYQGV 124

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           M+R NF G + THG    HRS GS G    PG VFK KKMAG  G  RVTVKNLE+V + 
Sbjct: 125 MRRWNFAGSKDTHGCEKVHRSGGSIGNNTFPGHVFKGKKMAGHWGDERVTVKNLEIVDIR 184

Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207
            +  +ILVKG VPG  KN  +LVR
Sbjct: 185 AEDNVILVKGAVPGP-KNGLVLVR 207


>gi|319761138|ref|YP_004125075.1| 50S ribosomal protein l3 [Alicycliphilus denitrificans BC]
 gi|330822996|ref|YP_004386299.1| 50S ribosomal protein L3 [Alicycliphilus denitrificans K601]
 gi|317115699|gb|ADU98187.1| 50S ribosomal protein L3 [Alicycliphilus denitrificans BC]
 gi|329308368|gb|AEB82783.1| 50S ribosomal protein L3 [Alicycliphilus denitrificans K601]
          Length = 224

 Score =  163 bits (412), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/216 (41%), Positives = 130/216 (60%), Gaps = 13/216 (6%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  +PVTV+ + N +V   +T + +GY+A+QV  G  K   V+K
Sbjct: 8   GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVALQVTFGSRKASRVTK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKD-------DDLLPVGSVFSPSYFTVGQLVDVTGMTI 116
           P  G  +   V   + + EF V  +          +PV  VF+     VGQ VDV G +I
Sbjct: 68  PEAGHLAKAGVEAGEIIREFPVTAEVAGKYAAGATVPVADVFA-----VGQKVDVQGTSI 122

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           GKG++G +KRHNFG  RA+HG S SH   GS G  QDPGR+F  KKM G +G   VT +N
Sbjct: 123 GKGYAGTIKRHNFGSQRASHGNSRSHNVPGSIGMAQDPGRIFPGKKMTGHLGDATVTTQN 182

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           L+VV +D+ R L+L+KG VPG+ K  ++ VR + K+
Sbjct: 183 LDVVRIDEARQLLLIKGAVPGS-KGGFVTVRPAVKA 217


>gi|269140570|ref|YP_003297271.1| 50S ribosomal protein L3 [Edwardsiella tarda EIB202]
 gi|267986231|gb|ACY86060.1| 50S ribosomal protein L3 [Edwardsiella tarda EIB202]
 gi|304560359|gb|ADM43023.1| LSU ribosomal protein L3p (L3e) [Edwardsiella tarda FL6-60]
          Length = 199

 Score =  163 bits (412), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/194 (45%), Positives = 122/194 (62%), Gaps = 1/194 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT ++  +G  IPVTV+ ++  +V   + LD +GY A+QV  G  K   V+KP  G F+ 
Sbjct: 1   MTRIFTEDGVSIPVTVIEIEANRVTQVKDLDNDGYRAIQVTTGSKKANRVTKPEAGHFAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             V   + L EFR+ + ++   +G   S   F   + VDVTG++ GKGF+G +KR NF  
Sbjct: 61  AGVEAGRVLREFRLSEGEEFT-IGQNISVEIFADVKKVDVTGISKGKGFAGTVKRWNFRT 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
             ATHG S+SHR+ GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD +R L+LV
Sbjct: 120 QDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVDAERNLLLV 179

Query: 192 KGCVPGAKKNSWIL 205
           KG VPGA     I+
Sbjct: 180 KGAVPGATGGDLIV 193


>gi|329901062|ref|ZP_08272688.1| LSU ribosomal protein L3p (L3e) [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327549262|gb|EGF33840.1| LSU ribosomal protein L3p (L3e) [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 218

 Score =  163 bits (412), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 126/212 (59%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GM  ++  +G  IPVTV+ + N +V   +T + +GY +VQV  G+ +   
Sbjct: 1   MSLGLVGRKVGMMRIFTDDGDSIPVTVVDVSNNRVTQIKTPETDGYTSVQVAFGQRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQK-DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V++   G  +   V     L EFR+       +  G + + S F VGQ VDV G++IGKG
Sbjct: 61  VNQATAGHHAKAGVEAGTVLKEFRIDAVKASEMKAGDIVAASLFEVGQKVDVQGISIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RATHG S SH   GS G  QDPGRVF  K+M G MG   VT +NLE+
Sbjct: 121 YAGVIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTTQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             +D  R L+L+KG VPGA KN  ++V  + K
Sbjct: 181 ARIDADRQLLLIKGAVPGA-KNGKVVVSPAVK 211


>gi|325288578|ref|YP_004264759.1| LSU ribosomal protein L3P [Syntrophobotulus glycolicus DSM 8271]
 gi|324963979|gb|ADY54758.1| LSU ribosomal protein L3P [Syntrophobotulus glycolicus DSM 8271]
          Length = 209

 Score =  163 bits (412), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/211 (43%), Positives = 130/211 (61%), Gaps = 7/211 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++  +G+ IPVTV+    C V+  +T   +GY A+QVG  E + + 
Sbjct: 1   MSKGILGKKIGMTQIFLEDGKLIPVTVVEAGPCYVLQKKTQASDGYNAIQVGFSEIRERL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP  G F  V+V P + + EFR   D +   +G   +   F+ G  +DV G + GKGF
Sbjct: 61  VNKPKLGHFKKVDVKPSRFIREFRTD-DVESFEIGQTINADVFSTGDKIDVVGTSRGKGF 119

Query: 121 SGAMKRHNFGGLRAT--HGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           +G  KRH  GG R    HG    HR+ GS G +  P RVFK +++ GR+GG RVTV+NLE
Sbjct: 120 AGMHKRH--GGRRGPMGHGSKYHHRT-GSMGAK-GPARVFKGRELPGRLGGERVTVQNLE 175

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +V VD  + LIL+KGCVPGAKK+  IL + S
Sbjct: 176 IVRVDADKNLILIKGCVPGAKKSLLILKKTS 206


>gi|256380598|ref|YP_003104258.1| ribosomal protein L3 [Actinosynnema mirum DSM 43827]
 gi|255924901|gb|ACU40412.1| ribosomal protein L3 [Actinosynnema mirum DSM 43827]
          Length = 216

 Score =  163 bits (412), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/208 (43%), Positives = 123/208 (59%), Gaps = 2/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+  +   V   RT + +GY AVQ+  G    + V K
Sbjct: 8   GLLGTKLGMTQVFDENNRVVPVTVVKAEPNVVTQVRTQENDGYSAVQLAFGAIDPRKVIK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F+   V+P++ L E R   D     VG   +   F  G +VDV G + GKG++G 
Sbjct: 68  PVAGHFAKAGVTPRRHLAELRT-TDASEYQVGQEITAEVFEAGAVVDVVGTSRGKGYAGV 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GL A+HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL+V  VD
Sbjct: 127 MKRHGFAGLGASHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGHARVTTQNLKVFRVD 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            + GL+L+KG VPG K  + + V+ + K
Sbjct: 187 AESGLLLIKGAVPGPKGGT-VFVKTAAK 213


>gi|296131836|ref|YP_003639083.1| 50S ribosomal protein L3 [Thermincola sp. JR]
 gi|296030414|gb|ADG81182.1| 50S ribosomal protein L3 [Thermincola potens JR]
          Length = 209

 Score =  163 bits (412), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/212 (41%), Positives = 130/212 (61%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++N +G  +PVTV+    C VV  +T++ +GY ++Q+G GE +   
Sbjct: 1   MSKGILGKKIGMTQIFNEQGEVLPVTVVEAGPCVVVQKKTVETDGYNSIQLGFGEKRESL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP++G F+   V P K L EF+V   DD   +G       F  G+ VDV G + GKGF
Sbjct: 61  LTKPLKGHFAKAGVKPMKYLKEFKVVNIDDYQ-LGQEIKVDIFEAGERVDVEGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR+NF      HG S SHR  GS G +  P RVFK  K  G +G  +VT++NLE+V
Sbjct: 120 AGTIKRYNFQRGPMAHG-SKSHRRVGSAGAK-GPARVFKGTKRPGHLGAEKVTIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG +PG  K S + V+ S K+
Sbjct: 178 KVDPERNLLLIKGAIPGP-KGSLVAVKSSVKA 208


>gi|148273801|ref|YP_001223362.1| 50S ribosomal protein L3 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|212288254|sp|A5CUB3|RL3_CLAM3 RecName: Full=50S ribosomal protein L3
 gi|147831731|emb|CAN02700.1| 50S ribosomal protein L3 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 217

 Score =  162 bits (411), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/209 (44%), Positives = 124/209 (59%), Gaps = 2/209 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           +G++  KLGMT V++   + IPVTV+ +    V   RT + +GY A+Q+  G+   +   
Sbjct: 9   TGLLGTKLGMTQVWDENNKLIPVTVVQITPNVVTQVRTPEVDGYGAIQIAYGQIDPRKAD 68

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P++ L E R   D     +G   +   F  G  VDV G + GKGF+G
Sbjct: 69  KPSTGHFDKAGVTPRRHLTEVRTA-DFAEYALGQEITVGAFEPGTKVDVVGTSKGKGFAG 127

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF G+ A+HG   +HR  GS G    P RVFK  +MAGRMGG RVTV NL V SV
Sbjct: 128 VMKRHNFKGVSASHGSHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGERVTVLNLVVHSV 187

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D ++GL+LVKG VPGA +   + VR++ K
Sbjct: 188 DAEKGLLLVKGAVPGA-RGRIVFVRNAVK 215


>gi|225011647|ref|ZP_03702085.1| ribosomal protein L3 [Flavobacteria bacterium MS024-2A]
 gi|225004150|gb|EEG42122.1| ribosomal protein L3 [Flavobacteria bacterium MS024-2A]
          Length = 205

 Score =  162 bits (411), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/206 (43%), Positives = 129/206 (62%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++ +G+ IP TVL L  C V   RT   +GY A+Q+G  +   K V+
Sbjct: 2   SGLIGKKIGMTSLFDEKGKNIPCTVLELGPCVVTQVRTTAVDGYEALQLGFDDKAEKKVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F   N  PKKKL EF  Q  ++ L +G   +  +F  G+ VDV+G + GKGF G
Sbjct: 62  KAAAGHFKKANSVPKKKLVEF--QNFEEELNLGDTITVEHFNEGEFVDVSGTSKGKGFQG 119

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH F G+ +ATHG     R+ GS G    P RVFK  +MAG+MG  +V V+NL VV 
Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGQMGNVKVKVQNLRVVK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L++VKGCVPG  KN++++V+
Sbjct: 180 VVPEKNLLVVKGCVPG-HKNAYVIVQ 204


>gi|296105878|ref|YP_003617578.1| large subunit ribosomal protein L3 [Legionella pneumophila 2300/99
           Alcoy]
 gi|295647779|gb|ADG23626.1| large subunit ribosomal protein L3 [Legionella pneumophila 2300/99
           Alcoy]
 gi|307609138|emb|CBW98585.1| 50S ribosomal subunit protein L3 [Legionella pneumophila 130b]
          Length = 215

 Score =  162 bits (411), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/195 (46%), Positives = 121/195 (62%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+  EG  +PV+V+ +   +V   +T   +GY AVQ+  G  K   VSK
Sbjct: 3   GLLGRKIGMTRVFTPEGVSVPVSVVEVQPNRVSQVKTAANDGYSAVQLTGGTKKSSKVSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F+   +       EFR+  +D   P   +     FT GQ VDV+G+T GKGF+G 
Sbjct: 63  PVAGHFAKAQIDAGDMQVEFRIDSEDAFTPGQVISVADVFTAGQYVDVSGLTKGKGFAGT 122

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KRHNF    A+HG S SHR  GS G  Q PGRVFK KKMAG MG  R T+++LE+V VD
Sbjct: 123 VKRHNFRTQDASHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNARCTIQSLELVKVD 182

Query: 184 DKRGLILVKGCVPGA 198
            +R L+L+KG +PGA
Sbjct: 183 SERNLLLIKGAIPGA 197


>gi|295394348|ref|ZP_06804573.1| 50S ribosomal protein L3 [Brevibacterium mcbrellneri ATCC 49030]
 gi|294972806|gb|EFG48656.1| 50S ribosomal protein L3 [Brevibacterium mcbrellneri ATCC 49030]
          Length = 224

 Score =  162 bits (411), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/210 (43%), Positives = 122/210 (58%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++     +PVTV+   +  V   R  + +GY AVQ+G GE   + V+K
Sbjct: 17  GLMGTKLGMTQVWDENNNLVPVTVISASSNVVTQIRNEEVDGYSAVQIGYGEIDPRKVNK 76

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G F    V+P++ L E R   D     +G   S   F  G  VDVT  T GKGF+G 
Sbjct: 77  PAKGHFEKAGVAPRRHLVELRTA-DAGEYELGQELSTEVFEAGIKVDVTANTKGKGFAGV 135

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G+ A+HG   +HR  GS G    PGRVFK  +MAGRMG  R T +NL + S+D
Sbjct: 136 MKRHGFAGVGASHGQHRNHRKPGSIGGAATPGRVFKGMRMAGRMGNVRHTTQNLTIHSID 195

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +  L+L+KG VPG  K + +LVR + K A
Sbjct: 196 SENNLLLIKGAVPGP-KGAVVLVRSAAKGA 224


>gi|120402316|ref|YP_952145.1| 50S ribosomal protein L3 [Mycobacterium vanbaalenii PYR-1]
 gi|166233168|sp|A1T4N9|RL3_MYCVP RecName: Full=50S ribosomal protein L3
 gi|119955134|gb|ABM12139.1| LSU ribosomal protein L3P [Mycobacterium vanbaalenii PYR-1]
          Length = 218

 Score =  162 bits (411), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 89/214 (41%), Positives = 129/214 (60%), Gaps = 7/214 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   + +PVTV+      V   RT +++GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL----LPVGSVFSPSYFTVGQLVDVTGMTIG 117
           +KP+ G +++  V+P++ L E R+  DD+       VG   +   F  G  VDVTG + G
Sbjct: 63  NKPVTGQYAAAGVNPRRHLAELRL--DDEAAAAEYEVGQELTAEIFADGAYVDVTGTSKG 120

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF+G MKRH F G  A+HG    HR  GS G    PGRVFK  +M+GRMG +RVT +NL
Sbjct: 121 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGSDRVTTQNL 180

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +V  VD + G++L+KG +PG +    ++VR + K
Sbjct: 181 KVHKVDAENGVLLIKGAIPG-RNGGLVVVRSAIK 213


>gi|254517470|ref|ZP_05129526.1| ribosomal protein L3 [Clostridium sp. 7_2_43FAA]
 gi|226911219|gb|EEH96420.1| ribosomal protein L3 [Clostridium sp. 7_2_43FAA]
          Length = 209

 Score =  162 bits (411), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT +++  G+ +PVTV+    C VV  +T++K+GY A+QVG G+ + K 
Sbjct: 1   MKKAILGKKIGMTQIFDANGKVVPVTVVEAGPCVVVQKKTIEKDGYEAIQVGFGDVREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G ++   VS K+KL EFR++ D     VG       F  G  +DV+G++ GKGF
Sbjct: 61  VNKPKKGHYAKAGVSLKRKLKEFRLE-DCSAYEVGQEIKADLFEAGDKIDVSGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR N      THG S  HR+ GS G   DP R FKNK M G MG    TV NLEVV
Sbjct: 120 QGVIKRWNANRGPMTHG-SKFHRAVGSMGASSDPSRTFKNKNMPGHMGAVNTTVLNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ LIL+KG +PG  K + +++R++ K+
Sbjct: 179 KVIAEKNLILIKGGIPGPNKGT-VVIRNAVKA 209


>gi|257440269|ref|ZP_05616024.1| 50S ribosomal protein L3 [Faecalibacterium prausnitzii A2-165]
 gi|257197303|gb|EEU95587.1| 50S ribosomal protein L3 [Faecalibacterium prausnitzii A2-165]
          Length = 210

 Score =  162 bits (411), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 126/212 (59%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT +++  G+ IPVTV+    C VV  +T++ +GY AVQ+G GE   K 
Sbjct: 1   MVKGIIGKKVGMTQLFDESGKVIPVTVIEAGPCTVVQKKTVESDGYQAVQLGFGEVSAKK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F   NV+PKK L EFR++ D   + VG V     F  G  VDV G++ GKG+
Sbjct: 61  VNKAAAGHFKKANVAPKKTLREFRLE-DVSAMNVGDVLKADVFAAGDKVDVAGVSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR     LR +HG     R  GS G   +P RVF  K++ G MG  RVTV+NL VV
Sbjct: 120 QGVIKRFGQHRLRESHGTGPVARHAGSMGAISNPSRVFPGKRLPGHMGFVRVTVQNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  LI VKG VPG+ K + + + +S K+
Sbjct: 180 KVDTENNLIAVKGAVPGS-KGTIVTLANSVKA 210


>gi|295694837|ref|YP_003588075.1| 50S ribosomal protein L3 [Bacillus tusciae DSM 2912]
 gi|295410439|gb|ADG04931.1| 50S ribosomal protein L3 [Bacillus tusciae DSM 2912]
          Length = 210

 Score =  162 bits (411), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/211 (43%), Positives = 130/211 (61%), Gaps = 4/211 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT V+  +GR +PVTV+    C V+  +T++ +GY+A+Q+G  + K +  ++
Sbjct: 3   GILGRKLGMTQVFREDGRVVPVTVIEAGPCIVLQKKTVETDGYVAIQLGFADKKGRRANR 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G  +    +PKK + E R   D     VG       F  G+LVDVTG + GKG++G 
Sbjct: 63  PETGHAAKSGATPKKYIREIR-NVDIAKYEVGQELRADVFAPGELVDVTGTSKGKGYAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KRHN       HG S  HR  GS G    P RVFK + + GRMGG RVTV+NLEV+  D
Sbjct: 122 IKRHNQARGPMAHG-SKYHRGVGSLGS-IAPNRVFKGQTLPGRMGGERVTVQNLEVIQAD 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            +R L+LVKG VPG  +NS+++V+ + K+AV
Sbjct: 180 PERNLLLVKGAVPGP-RNSYVIVKSAVKAAV 209


>gi|331699176|ref|YP_004335415.1| 50S ribosomal protein L3 [Pseudonocardia dioxanivorans CB1190]
 gi|326953865|gb|AEA27562.1| 50S ribosomal protein L3 [Pseudonocardia dioxanivorans CB1190]
          Length = 217

 Score =  162 bits (411), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 89/209 (42%), Positives = 126/209 (60%), Gaps = 2/209 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           +G++ +KLGMT V++   R +PVTV+      V   R+ + +GY+AVQ+  G    + V+
Sbjct: 7   TGILGKKLGMTQVFDENNRVVPVTVVQAGPNVVTQIRSQETDGYVAVQLAFGAVDPRRVN 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V+P++   E R   D     +G   +   F  G +VDV G + GKG++G
Sbjct: 67  KPETGHFAKAGVTPRRYTVELRT-TDAGEYSLGQEITAEVFEPGAVVDVVGTSKGKGYAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF GL A+HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V  V
Sbjct: 126 VMKRHNFKGLGASHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGSVRVTTQNLTVHRV 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D +RGL+L+KG VPG  + + ++V+ + K
Sbjct: 186 DAERGLLLIKGAVPGP-RGALVVVKTAAK 213


>gi|2113866|emb|CAA73672.1| rplC [Mycobacterium bovis BCG]
          Length = 217

 Score =  162 bits (411), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 124/212 (58%), Gaps = 3/212 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   R  PVTV+      V   RT +++GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDESNRVAPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP--VGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP+ G +++  V+P++ L E R+   D      VG   +   F  G  VDVTG + GKG
Sbjct: 63  NKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKRH F G  A+HG    HR  GS G    P RVFK  +MAGRMG +RVTV NL V
Sbjct: 123 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLV 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             VD + G++L+KG VPG +    ++VR + K
Sbjct: 183 HKVDAENGVLLIKGAVPG-RTGGLVMVRSAIK 213


>gi|108797986|ref|YP_638183.1| 50S ribosomal protein L3 [Mycobacterium sp. MCS]
 gi|119867082|ref|YP_937034.1| 50S ribosomal protein L3 [Mycobacterium sp. KMS]
 gi|126433648|ref|YP_001069339.1| 50S ribosomal protein L3 [Mycobacterium sp. JLS]
 gi|123070590|sp|Q1BDA7|RL3_MYCSS RecName: Full=50S ribosomal protein L3
 gi|166233164|sp|A3PVC1|RL3_MYCSJ RecName: Full=50S ribosomal protein L3
 gi|166233165|sp|A1UBN6|RL3_MYCSK RecName: Full=50S ribosomal protein L3
 gi|108768405|gb|ABG07127.1| LSU ribosomal protein L3P [Mycobacterium sp. MCS]
 gi|119693171|gb|ABL90244.1| LSU ribosomal protein L3P [Mycobacterium sp. KMS]
 gi|126233448|gb|ABN96848.1| LSU ribosomal protein L3P [Mycobacterium sp. JLS]
          Length = 217

 Score =  162 bits (411), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/212 (41%), Positives = 125/212 (58%), Gaps = 3/212 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   + +PVTV+      V   RT +++GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTPERDGYSAVQIAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP+ G F++  V+P++ L E R+  +       VG   +   F+ G  VDVTG + GKG
Sbjct: 63  NKPVTGQFAAAGVNPRRHLAELRLDDESAAADYEVGQELTAEVFSDGAYVDVTGTSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKRH F G  A HG    HR  GS G    PGRVFK  +M+GRMG +RVT +NL V
Sbjct: 123 FAGTMKRHGFKGQGAAHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGSDRVTTQNLVV 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             VD   G++L+KG +PG +    ++VR + K
Sbjct: 183 HKVDAANGVLLIKGAIPG-RNGGLVMVRSAIK 213


>gi|170780733|ref|YP_001709065.1| 50S ribosomal protein L3 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|212288255|sp|B0RB39|RL3_CLAMS RecName: Full=50S ribosomal protein L3
 gi|169155301|emb|CAQ00404.1| 50S ribosomal protein L3 [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 217

 Score =  162 bits (411), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/209 (44%), Positives = 124/209 (59%), Gaps = 2/209 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           +G++  KLGMT V++   + IPVTV+ +    V   RT + +GY A+Q+  G+   +   
Sbjct: 9   TGLLGTKLGMTQVWDENNKLIPVTVVQITPNVVTQVRTPEVDGYGAIQIAYGQIDPRKAD 68

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P++ L E R   D     +G   +   F  G  VDV G + GKGF+G
Sbjct: 69  KPSTGHFDKAGVTPRRHLTEVRTA-DFAEYTLGQEITVGAFEPGTKVDVVGTSKGKGFAG 127

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF G+ A+HG   +HR  GS G    P RVFK  +MAGRMGG RVTV NL V SV
Sbjct: 128 VMKRHNFKGVSASHGSHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGERVTVLNLVVHSV 187

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D ++GL+LVKG VPGA +   + VR++ K
Sbjct: 188 DAEKGLLLVKGAVPGA-RGRIVFVRNAVK 215


>gi|91791539|ref|YP_561190.1| 50S ribosomal protein L3 [Shewanella denitrificans OS217]
 gi|123061370|sp|Q12SV9|RL3_SHEDO RecName: Full=50S ribosomal protein L3
 gi|91713541|gb|ABE53467.1| LSU ribosomal protein L3P [Shewanella denitrificans OS217]
          Length = 212

 Score =  162 bits (411), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 89/206 (43%), Positives = 124/206 (60%), Gaps = 1/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  IPVTV+ +   +V   +TL+ +GY A+QV  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFTEDGVSIPVTVIEVAGNRVTQVKTLETDGYRALQVTTGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++K   G F+   V   + L+E R+   + + + VG+  +   F     VDVTG + GKG
Sbjct: 61  ITKAEAGHFAKGGVEAGRGLWEMRLADGEGEGIEVGAELNVDIFAETVKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF     THG S++HRS+GS G  Q PGRVFK KKM+G MG  +VT +NL V
Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAEQVTTQNLHV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205
           V VD +R LILV+G VPGA     I+
Sbjct: 181 VRVDSERNLILVRGAVPGATNGDLII 206


>gi|226305341|ref|YP_002765299.1| 50S ribosomal protein L3 [Rhodococcus erythropolis PR4]
 gi|229489469|ref|ZP_04383332.1| 50S ribosomal protein L3 [Rhodococcus erythropolis SK121]
 gi|259709732|sp|C0ZW25|RL3_RHOE4 RecName: Full=50S ribosomal protein L3
 gi|226184456|dbj|BAH32560.1| 50S ribosomal protein L3 [Rhodococcus erythropolis PR4]
 gi|229323566|gb|EEN89324.1| 50S ribosomal protein L3 [Rhodococcus erythropolis SK121]
          Length = 218

 Score =  162 bits (410), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 88/213 (41%), Positives = 123/213 (57%), Gaps = 2/213 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      V   RT +++GY AVQ+  G    + V+K
Sbjct: 8   GILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQIRTEERDGYSAVQLAFGAIDPRKVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V+P++ + E RV    D   VG   +   F  G  VDVTG + GKGF+G 
Sbjct: 68  PTSGQFTKAGVTPRRHVVELRVADTSDY-EVGQELTAEVFEDGAYVDVTGTSKGKGFAGT 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G  A+HG    HR  GS G    PGRVFK  +M+GRMG +R+T +NL V  VD
Sbjct: 127 MKRHGFKGQGASHGTQAVHRRPGSIGGCATPGRVFKGMRMSGRMGSDRITTQNLSVHKVD 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            + GL+L+KG +PG +K   ++V+ + K     
Sbjct: 187 AENGLLLIKGAIPG-RKGGLVIVKSAVKGGARA 218


>gi|320199504|gb|EFW74094.1| LSU ribosomal protein L3p (L3e) [Escherichia coli EC4100B]
          Length = 199

 Score =  162 bits (410), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 89/194 (45%), Positives = 121/194 (62%), Gaps = 1/194 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K   V+KP  G F+ 
Sbjct: 1   MTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTKPEAGHFAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G +KR NF  
Sbjct: 61  AGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAGTVKRWNFRT 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
             ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV VD +R L+LV
Sbjct: 120 QDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAERNLLLV 179

Query: 192 KGCVPGAKKNSWIL 205
           KG VPGA  +  I+
Sbjct: 180 KGAVPGATGSDLIV 193


>gi|302523993|ref|ZP_07276335.1| 50S ribosomal protein L3 [Streptomyces sp. AA4]
 gi|302432888|gb|EFL04704.1| 50S ribosomal protein L3 [Streptomyces sp. AA4]
          Length = 216

 Score =  162 bits (410), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 91/208 (43%), Positives = 120/208 (57%), Gaps = 2/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++ + R +PVTV+      V   RT DK+GY AVQ+  G    + V+K
Sbjct: 8   GILGTKLGMTQVFDEQNRVVPVTVVKAGPNVVTQVRTTDKDGYAAVQLAFGAVDPRKVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ L E R   D +   VG   +   F  G  VDVTG + GKG++G 
Sbjct: 68  PRTGHFDKAGVTPRRHLAELRTT-DAETYEVGQEITAEVFEAGTTVDVTGTSKGKGYAGV 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G  A+HG    HR  GS G    PGRVFK  +MAGRMG +RVT + L V +V 
Sbjct: 127 MKRHGFKGQGASHGAQAVHRKPGSIGGCATPGRVFKGLRMAGRMGSDRVTTQGLTVHAVR 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            + GL+L+KG VPG  K   + VR + K
Sbjct: 187 AEDGLLLIKGAVPGP-KGGLLFVRSAAK 213


>gi|153812865|ref|ZP_01965533.1| hypothetical protein RUMOBE_03272 [Ruminococcus obeum ATCC 29174]
 gi|149831077|gb|EDM86166.1| hypothetical protein RUMOBE_03272 [Ruminococcus obeum ATCC 29174]
          Length = 210

 Score =  162 bits (410), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 93/212 (43%), Positives = 127/212 (59%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G+ IPVTVL    C V   +T + +GY AVQVG GE + K 
Sbjct: 1   MKKAILATKVGMTQIFNEDGQLIPVTVLQAGPCVVTQVKTEENDGYAAVQVGYGEIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G F    V+ K+ + EFR +   +   VG       F  G  +DVT ++ GKGF
Sbjct: 61  VNKPEKGHFDKAGVAAKRFVKEFRFENAAEYT-VGQEIKTDIFADGDHIDVTAVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G   DP +VFK K M G MG  +VTV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKHMPGHMGNVQVTVQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  L+LVKG VPG KK S + ++++ KS
Sbjct: 179 RVDTENNLLLVKGAVPGPKK-SLVTIKETVKS 209


>gi|227832219|ref|YP_002833926.1| 50S ribosomal protein L3 [Corynebacterium aurimucosum ATCC 700975]
 gi|262183926|ref|ZP_06043347.1| 50S ribosomal protein L3 [Corynebacterium aurimucosum ATCC 700975]
 gi|254803667|sp|C3PKQ2|RL3_CORA7 RecName: Full=50S ribosomal protein L3
 gi|227453235|gb|ACP31988.1| 50S ribosomal protein L3 [Corynebacterium aurimucosum ATCC 700975]
          Length = 218

 Score =  162 bits (410), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 87/213 (40%), Positives = 122/213 (57%), Gaps = 2/213 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++ E R +PVTV+    C V   RT + +GY A+Q+  GE   + V+K
Sbjct: 8   GILGTKLGMTQVFDEENRVVPVTVVEAGPCVVTQIRTKETDGYNAIQIAFGEKDPRKVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ + E R+  D     VG       F     VDVTG T G G++GA
Sbjct: 68  PATGHFKKAGVTPRRYVAEIRMD-DTSAYEVGQEVKVDIFEGVSFVDVTGTTKGHGYAGA 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G  A HG   +HR  G  G    PGRVFK K+MAGRMG +RVT +NL++  +D
Sbjct: 127 MKRHGFAGQGAAHGNQAAHRRVGGIGGASFPGRVFKGKRMAGRMGQDRVTTQNLKIQKID 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            +  L+L+KG +PGA +   + V+ + K   + 
Sbjct: 187 AESNLLLIKGAIPGA-RGGLVTVKTAVKGGAHA 218


>gi|160942901|ref|ZP_02090140.1| hypothetical protein FAEPRAM212_00377 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445802|gb|EDP22805.1| hypothetical protein FAEPRAM212_00377 [Faecalibacterium prausnitzii
           M21/2]
 gi|295103925|emb|CBL01469.1| LSU ribosomal protein L3P [Faecalibacterium prausnitzii SL3/3]
          Length = 210

 Score =  162 bits (410), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 125/212 (58%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT +++  G+ IPVTV+    C VV  +T++ +GY AVQ+G GE   K 
Sbjct: 1   MVKGIIGKKVGMTQLFDESGKVIPVTVIEAGPCTVVQKKTVESDGYQAVQLGFGEVSAKK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F   NV+PKK L EFR+  D   + VG +     F  G  VDV G++ GKG+
Sbjct: 61  VNKAAAGHFKKANVAPKKTLREFRLD-DVSAMNVGDILKADVFAAGDKVDVAGVSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR     LR +HG     R  GS G   +P RVF  K++ G MG  RVTV+NL VV
Sbjct: 120 QGVIKRFGQHRLRESHGTGPVARHAGSMGAISNPSRVFPGKRLPGHMGCVRVTVQNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  LI VKG VPG+ K + I + +S K+
Sbjct: 180 KVDTENNLIAVKGAVPGS-KGTIITLANSVKA 210


>gi|254422678|ref|ZP_05036396.1| ribosomal protein L3 [Synechococcus sp. PCC 7335]
 gi|196190167|gb|EDX85131.1| ribosomal protein L3 [Synechococcus sp. PCC 7335]
          Length = 212

 Score =  162 bits (410), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 89/197 (45%), Positives = 119/197 (60%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT V++  G  IPVTV+    C V   +T   +GY +VQ+G GE K K 
Sbjct: 1   MSVGILGTKLGMTQVFDETGNAIPVTVIQAGPCVVTQIKTEKTDGYSSVQIGYGEVKEKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G       SP + L E+RV  D     +G   +   F  GQ +DV+G++IGKGF
Sbjct: 61  LNRPKLGHLKKSGASPLRHLREYRVS-DTGEFELGQALAADRFEAGQTIDVSGISIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KR+NF     +HG S +HR+ GSTG    PGRV+  KKMAGRMG  +VT++ L VV
Sbjct: 120 AGNQKRNNFRRGPMSHG-SKNHRAPGSTGAGTTPGRVYPGKKMAGRMGSEKVTIRKLSVV 178

Query: 181 SVDDKRGLILVKGCVPG 197
            VD  R L+LVKG VPG
Sbjct: 179 RVDSDRNLLLVKGGVPG 195


>gi|78186070|ref|YP_374113.1| 50S ribosomal protein L3 [Chlorobium luteolum DSM 273]
 gi|109893534|sp|Q3B6G1|RL3_PELLD RecName: Full=50S ribosomal protein L3
 gi|78165972|gb|ABB23070.1| LSU ribosomal protein L3P [Chlorobium luteolum DSM 273]
          Length = 209

 Score =  162 bits (409), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 87/202 (43%), Positives = 122/202 (60%), Gaps = 1/202 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT +YN +   +P T++    C V   +  +K+GY AVQ+G GE K   V+KP
Sbjct: 4   ILGKKIGMTRLYNDKREAVPCTIIQAGPCFVTQVKNAEKDGYDAVQIGIGERKEHKVTKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M G +    V+P   + EF     D  L  GS  S   F  G++V+V G++ GKGF+G +
Sbjct: 64  MLGHYKKAGVTPGYMMAEFDASMFDVELAAGSPVSVESFKEGEIVNVLGVSKGKGFAGVV 123

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHNFGG   THG S   R+ GS G   DP R FK  +M GRMG + VTV+NL+VV +  
Sbjct: 124 KRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFKGTRMGGRMGSDNVTVRNLQVVKIMA 183

Query: 185 KRGLILVKGCVPGAKKNSWILV 206
           +  LI+VKG VPG  KNS++ +
Sbjct: 184 ESNLIMVKGSVPGP-KNSYVKI 204


>gi|302388088|ref|YP_003823910.1| 50S ribosomal protein L3 [Clostridium saccharolyticum WM1]
 gi|302198716|gb|ADL06287.1| 50S ribosomal protein L3 [Clostridium saccharolyticum WM1]
          Length = 211

 Score =  162 bits (409), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 91/213 (42%), Positives = 129/213 (60%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++A K+GMT ++N  G   PVTVL    C V   +T++ +GY AVQVG  + + K 
Sbjct: 1   MKKGILATKVGMTQIFNENGVLTPVTVLQAGPCVVTQVKTVENDGYSAVQVGYVDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKP++G F    VS K+ + EF+++ + D   V        F  G  +D T ++ GKGF
Sbjct: 61  VSKPIKGHFDKAGVSYKRYVREFKLE-NADQYSVKDEIKAEIFAAGDKIDATAISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G   DP +VFK KKM G+MG  +VT++NLE+V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SKFHRHAGSNGACSDPSKVFKGKKMPGQMGNKKVTIQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            VD +  LILVKG VPG KK S + ++++ K++
Sbjct: 179 RVDAENNLILVKGAVPGPKK-SLVTIKETVKAS 210


>gi|255324736|ref|ZP_05365850.1| 50S ribosomal protein L3 [Corynebacterium tuberculostearicum SK141]
 gi|255298211|gb|EET77514.1| 50S ribosomal protein L3 [Corynebacterium tuberculostearicum SK141]
          Length = 218

 Score =  162 bits (409), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 85/213 (39%), Positives = 123/213 (57%), Gaps = 2/213 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT V++ + R +PVTV+    C V   RT + +GY A+Q+  GE   +  +K
Sbjct: 8   GILGKKLGMTQVFDEDNRVVPVTVVEAGPCVVTQIRTPETDGYSAIQIAFGEIDPRKANK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+P++ + E R+  D     VG       F     VDVTG T G G++GA
Sbjct: 68  PVGGHFKKAGVTPRRHVAEIRMD-DTSAYEVGQEVKVDIFEGTTFVDVTGKTKGHGYAGA 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G  A HG   +HR  G  G    PGRVFK K+MAGRMG +RVT +NL++  +D
Sbjct: 127 MKRHGFAGQGAAHGNQAAHRRVGGIGGAATPGRVFKGKRMAGRMGHDRVTTQNLKIQKID 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            +  L+L+KG +PGA +   + V+ + K   + 
Sbjct: 187 AESNLLLIKGAIPGA-RGGLVTVKTAVKGGAHA 218


>gi|317125872|ref|YP_004099984.1| 50S ribosomal protein L3P [Intrasporangium calvum DSM 43043]
 gi|315589960|gb|ADU49257.1| LSU ribosomal protein L3P [Intrasporangium calvum DSM 43043]
          Length = 221

 Score =  162 bits (409), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 86/202 (42%), Positives = 119/202 (58%), Gaps = 2/202 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V++ + R +PVTV+    C V   R    +GY AVQ+  G    + V++PM G F  
Sbjct: 22  MTQVWDADNRLVPVTVVEAGPCVVTQVRNGATDGYDAVQIAFGAIDPRKVNQPMSGHFEK 81

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             V+P++ L E R     D   +G   S   F  GQ VD TG T GKGF+G MKRH F G
Sbjct: 82  AGVTPRRHLVELRTADAADY-ELGQEISADVFEAGQRVDATGTTKGKGFAGVMKRHGFAG 140

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
           + ++HG   +HR  GS G    PGRVF+  +MAGRMGG R T +NL++ +VD ++GL+L+
Sbjct: 141 VSSSHGSHRNHRKPGSIGGCATPGRVFRGMRMAGRMGGVRQTTQNLQIHAVDAEKGLLLI 200

Query: 192 KGCVPGAKKNSWILVRDSFKSA 213
           KG VPG  +   +L+R + K A
Sbjct: 201 KGAVPG-PRGGIVLIRTAAKGA 221


>gi|237786395|ref|YP_002907100.1| 50S ribosomal protein L3 [Corynebacterium kroppenstedtii DSM 44385]
 gi|259647406|sp|C4LL52|RL3_CORK4 RecName: Full=50S ribosomal protein L3
 gi|237759307|gb|ACR18557.1| 50S ribosomal protein L3 [Corynebacterium kroppenstedtii DSM 44385]
          Length = 219

 Score =  162 bits (409), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 88/199 (44%), Positives = 120/199 (60%), Gaps = 6/199 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++ + R +PVTV+    C V   RT +K+GY A+Q+  G+   + V+K
Sbjct: 8   GILGTKLGMTQVFDEDNRVVPVTVVEAGPCVVTQIRTEEKDGYSAIQIAYGDIDPRKVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLL---PVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           P  G F+   V+P++ + E R+   DD+L    VG   +   F   + VDVTG T G GF
Sbjct: 68  PQSGHFAKAGVTPRRYVTEIRM---DDVLSDYEVGQDVTVELFGDVKFVDVTGTTRGHGF 124

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRH F G  A HG   +HR  G  G    PGRVFK  +MAGRMG NRVT +NL++ 
Sbjct: 125 AGAMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGNNRVTTQNLKLF 184

Query: 181 SVDDKRGLILVKGCVPGAK 199
            VD    L+L+KG VPG +
Sbjct: 185 KVDADSNLLLIKGAVPGIR 203


>gi|325269535|ref|ZP_08136151.1| 50S ribosomal protein L3 [Prevotella multiformis DSM 16608]
 gi|324988154|gb|EGC20121.1| 50S ribosomal protein L3 [Prevotella multiformis DSM 16608]
          Length = 204

 Score =  162 bits (409), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 85/203 (41%), Positives = 126/203 (62%), Gaps = 4/203 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G GEAK K  SK
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKTVEKDGYKAVQLGFGEAKEKRTSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G F     +PKK L EF+  ++ +L   G   +   F   + VD+ G + GKGF G 
Sbjct: 63  PQQGHFKKAGTTPKKHLAEFKFDEEYNL---GDTITVELFNDAKFVDIVGTSKGKGFQGV 119

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ ++THG     R  GS G    P +VFK  +MAG+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLQVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205
             +  L+LVKG V G   ++ I+
Sbjct: 180 IPEHNLLLVKGSVAGCNGSTVII 202


>gi|310659502|ref|YP_003937223.1| 50S ribosomal protein L3 [Clostridium sticklandii DSM 519]
 gi|308826280|emb|CBH22318.1| 50S ribosomal subunit protein L3 [Clostridium sticklandii]
          Length = 208

 Score =  162 bits (409), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 94/207 (45%), Positives = 123/207 (59%), Gaps = 3/207 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           V+ RKLGMT V+  +GR +PVTV+      V   +  + +GY AVQV  GE K K V+KP
Sbjct: 4   VLGRKLGMTQVFAEDGRLVPVTVIEAGPMVVTQIKNKETDGYEAVQVAFGEVKEKRVNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           +RG F+   V  KK + EF+V+ D     +        F  G+ VD  G + GKGF G +
Sbjct: 64  LRGHFAKAGVGFKKFVREFKVE-DLSAYSLAQEIKVDVFEAGEKVDAIGTSKGKGFQGPI 122

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHN      THG S  HR  GS G   DP RVFK KK+AG MG  RVT++NLEVV VD 
Sbjct: 123 KRHNQSRGPMTHG-SRYHRGPGSMGAASDPSRVFKGKKLAGHMGAERVTIQNLEVVKVDV 181

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
           ++ LIL+KG VPG KK   ++++ + K
Sbjct: 182 EKNLILIKGAVPGPKKG-LVVIKKAIK 207


>gi|220930965|ref|YP_002507873.1| ribosomal protein L3 [Halothermothrix orenii H 168]
 gi|254803676|sp|B8D0C4|RL3_HALOH RecName: Full=50S ribosomal protein L3
 gi|219992275|gb|ACL68878.1| ribosomal protein L3 [Halothermothrix orenii H 168]
          Length = 211

 Score =  162 bits (409), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 92/216 (42%), Positives = 133/216 (61%), Gaps = 5/216 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT +++ +G  IPVTV+    C V+  +  +++GY A+QVG  +     
Sbjct: 1   MAKGIIGKKLGMTQIFDDDGNVIPVTVVQAGPCVVIQKKVEERDGYNALQVGFEDVPEHR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F    V PKK + EF    +D  L  G   +   F  G+LVDVTG++ GKGF
Sbjct: 61  VNKPLKGHFERAGVKPKKHVKEFMDFPED--LNEGDEITVDIFEEGELVDVTGISKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF     +HG S  HR+ GS G   D  RVFK +K+ GRMG +RVT++NLEVV
Sbjct: 119 AGTIKRWNFSRGPMSHG-SRFHRAPGSIGA-VDASRVFKGQKLPGRMGHDRVTIQNLEVV 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            VD ++ L+L+KG VPG  K   + +R++ K A N 
Sbjct: 177 RVDSEKNLLLIKGSVPGPNK-GILTIREAVKKASNA 211


>gi|167039520|ref|YP_001662505.1| 50S ribosomal protein L3 [Thermoanaerobacter sp. X514]
 gi|300915229|ref|ZP_07132544.1| 50S ribosomal protein L3 [Thermoanaerobacter sp. X561]
 gi|307725153|ref|YP_003904904.1| 50S ribosomal protein L3 [Thermoanaerobacter sp. X513]
 gi|226730583|sp|B0K5P3|RL3_THEPX RecName: Full=50S ribosomal protein L3
 gi|166853760|gb|ABY92169.1| ribosomal protein L3 [Thermoanaerobacter sp. X514]
 gi|300888953|gb|EFK84100.1| 50S ribosomal protein L3 [Thermoanaerobacter sp. X561]
 gi|307582214|gb|ADN55613.1| 50S ribosomal protein L3 [Thermoanaerobacter sp. X513]
          Length = 210

 Score =  162 bits (409), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 96/214 (44%), Positives = 131/214 (61%), Gaps = 7/214 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ RK GMT +++ +G  IPVTV+    C VV  +T++ +GY A+QVG G+ K K 
Sbjct: 1   MKKGILGRKHGMTQIFDEKGEVIPVTVIEAGPCVVVQKKTVETDGYNAIQVGFGDVKEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           ++KP+ G F    V  K+ L EFR+   DD+    VGS      F  G  V+VTG++ GK
Sbjct: 61  LTKPLIGHFKKAGVPFKRYLREFRL---DDISGYEVGSEIKVDIFKPGDRVNVTGISKGK 117

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF+G +KR+       +HG S  HR  GS     DPGR FK K M G MG  RVT++NLE
Sbjct: 118 GFAGVVKRYGANRGPMSHG-SKYHRRVGSMSATTDPGRTFKGKIMPGHMGHERVTIQNLE 176

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VV VD +  L+LVKG VPG  K S ++++DS KS
Sbjct: 177 VVKVDPELNLLLVKGSVPGP-KGSLLIIKDSVKS 209


>gi|17547738|ref|NP_521140.1| 50S ribosomal protein L3 [Ralstonia solanacearum GMI1000]
 gi|42559667|sp|Q8XV12|RL3_RALSO RecName: Full=50S ribosomal protein L3
 gi|17430043|emb|CAD16728.1| probable 50s ribosomal protein l3 [Ralstonia solanacearum GMI1000]
          Length = 220

 Score =  162 bits (409), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 91/213 (42%), Positives = 128/213 (60%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V+  +G  IPVTVL +   +V   +T + +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGTRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + + EFR+       L +G       F+V Q +DV G TIGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEIIVEFRIDATKAAELKLGDTIDVDLFSVDQKIDVQGTTIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR++F   RA+HG S SH   GS G  QDPGRVF  K+M G MG    TV+NL +
Sbjct: 121 YAGTIKRYHFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V +D +R L+LVKG VPGA K+ +++V  + K+
Sbjct: 181 VRIDAERKLLLVKGAVPGA-KSGFVVVSPAVKA 212


>gi|224531994|ref|ZP_03672626.1| ribosomal protein L3 [Borrelia valaisiana VS116]
 gi|224511459|gb|EEF81865.1| ribosomal protein L3 [Borrelia valaisiana VS116]
          Length = 206

 Score =  162 bits (409), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 94/209 (44%), Positives = 130/209 (62%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V+   G  +PVTV+      ++  +T+D++GY A+  G+ + K   VSK
Sbjct: 3   GLIGKKVGMTQVFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKVSK 62

Query: 64  PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G + S+ ++ PKK + E    K  D    G       F   + VDVTG T GKGF G
Sbjct: 63  PIKGQYKSLKDIEPKKYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRMGGN+ T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D++R  ILVKG VPGA K S+++V+ S K
Sbjct: 179 DEERRAILVKGAVPGA-KGSFVVVKKSKK 206


>gi|114561336|ref|YP_748849.1| 50S ribosomal protein L3 [Shewanella frigidimarina NCIMB 400]
 gi|122301115|sp|Q089Q4|RL3_SHEFN RecName: Full=50S ribosomal protein L3
 gi|114332629|gb|ABI70011.1| LSU ribosomal protein L3P [Shewanella frigidimarina NCIMB 400]
          Length = 212

 Score =  161 bits (408), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 88/206 (42%), Positives = 124/206 (60%), Gaps = 1/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  IPVTV+ +   +V   +TL+ +GY A+QV  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFTEDGTSIPVTVIEIAGNRVTQVKTLETDGYRALQVTTGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++K   G F+   V   + L+E R+   + + + VG+  +   F     VDVTG + GKG
Sbjct: 61  ITKAEAGHFAKGGVEAGRGLWEMRLADGEGEGIEVGAEINVDIFADTVKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF     THG S++HRS+GS G  Q PGRVFK KKM+G MG  +VT +NL V
Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAEQVTTQNLHV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205
           V VD +R L+LV+G VPGA     I+
Sbjct: 181 VRVDAERNLLLVRGAVPGATNGDLII 206


>gi|54293321|ref|YP_125736.1| 50S ribosomal protein L3 [Legionella pneumophila str. Lens]
 gi|81822454|sp|Q5WZL2|RL3_LEGPL RecName: Full=50S ribosomal protein L3
 gi|53753153|emb|CAH14600.1| 50S ribosomal subunit protein L3 [Legionella pneumophila str. Lens]
          Length = 216

 Score =  161 bits (408), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 91/198 (45%), Positives = 122/198 (61%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  EG  +PV+V+ +   +V   +T   +GY AVQ+  G  K   
Sbjct: 1   MMIGLLGRKIGMTRVFTPEGVSVPVSVVEVHPNRVSQVKTAANDGYSAVQLTGGIKKSSK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKP+ G F+   +       EFR+  +D   P   +     FT GQ VDV+G+T GKGF
Sbjct: 61  VSKPVAGHFAKAQIDAGDMQVEFRIDSEDAFTPGQVISVADVFTAGQYVDVSGLTKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNF    A+HG S SHR  GS G  Q PGRVFK KKMAG MG  R T+++LE+V
Sbjct: 121 AGTVKRHNFRTQDASHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNARCTIQSLELV 180

Query: 181 SVDDKRGLILVKGCVPGA 198
            VD +R L+L+KG +PGA
Sbjct: 181 KVDSERNLLLIKGAIPGA 198


>gi|110802837|ref|YP_699663.1| 50S ribosomal protein L3 [Clostridium perfringens SM101]
 gi|123341525|sp|Q0SQE4|RL3_CLOPS RecName: Full=50S ribosomal protein L3
 gi|110683338|gb|ABG86708.1| 50S ribosomal protein L3 [Clostridium perfringens SM101]
          Length = 209

 Score =  161 bits (408), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT +++  GR IPVTV+    C VV  +T++ +GY A+QVG GE + K 
Sbjct: 1   MKKAIIGKKVGMTQIFDENGRVIPVTVVEAGPCVVVQKKTVETDGYDAIQVGFGELREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP RG F+   VS ++ L EFR++ D     VG       F +G  VDV+G++ GKGF
Sbjct: 61  VNKPRRGHFAKAGVSLRRTLKEFRME-DVANYNVGDEIKVDTFEIGDKVDVSGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR N      +HG S  HR+ GS G   DP R FKNK+M G MG    TV NLEVV
Sbjct: 120 QGTIKRWNASRGPMSHG-SKFHRAPGSMGAASDPSRTFKNKRMPGHMGAKNTTVLNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  ++ +IL+KG +PG  K + I++R+S K+
Sbjct: 179 KIMPEKNIILIKGGIPGPNKGT-IVIRNSVKA 209


>gi|227502654|ref|ZP_03932703.1| 50S ribosomal protein L3 [Corynebacterium accolens ATCC 49725]
 gi|306835219|ref|ZP_07468253.1| 50S ribosomal protein L3 [Corynebacterium accolens ATCC 49726]
 gi|227076384|gb|EEI14347.1| 50S ribosomal protein L3 [Corynebacterium accolens ATCC 49725]
 gi|304568899|gb|EFM44430.1| 50S ribosomal protein L3 [Corynebacterium accolens ATCC 49726]
          Length = 218

 Score =  161 bits (408), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 87/213 (40%), Positives = 122/213 (57%), Gaps = 2/213 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT V++ E R +PVTV+    C V   RT + +GY A+Q+  GE   +  +K
Sbjct: 8   GILGKKLGMTQVFDDENRVVPVTVVEAGPCVVTQIRTPETDGYSAIQIAFGEIDPRKANK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ + E R+  D     VG       F     VDVTG T G G++GA
Sbjct: 68  PESGHFKKAGVTPRRHVAEIRMD-DTSAYEVGQEVKVDIFEGITFVDVTGQTKGHGYAGA 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G  A HG   +HR  G  G    PGRVFK K+MAGRMG +RVT +NL++  VD
Sbjct: 127 MKRHGFQGQGAAHGNQAAHRRVGGIGGAATPGRVFKGKRMAGRMGHDRVTTQNLKIQKVD 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            +  L+L+KG +PGA +   + V+ + K   + 
Sbjct: 187 VESNLLLIKGAIPGA-RGGLVTVKTAVKGGAHA 218


>gi|297537531|ref|YP_003673300.1| 50S ribosomal protein L3 [Methylotenera sp. 301]
 gi|297256878|gb|ADI28723.1| 50S ribosomal protein L3 [Methylotenera sp. 301]
          Length = 219

 Score =  161 bits (408), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 86/213 (40%), Positives = 129/213 (60%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  +G  IPVTVL +   +V   +T+  +GY  +QV  G  +   
Sbjct: 1   MSLGLIGRKVGMTRVFTEDGASIPVTVLEVVPNRVTQIKTIASDGYTGLQVAYGTRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++  + G ++    +    + EF V  D       G+  +   F  GQ+VDVTG+++GKG
Sbjct: 61  INSALTGHYAKSGSAAGAGIHEFPVTSDVLANYTAGANITVDIFQAGQIVDVTGISLGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+GA+KRH+F   RA+HG S SH   GS G  QDPGRVF  K+M G +G  +VT +NLE+
Sbjct: 121 FAGAIKRHHFKSNRASHGNSKSHNVPGSIGMAQDPGRVFPGKRMPGHLGATKVTTQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+L+KG +PG+K    ++VR + K+
Sbjct: 181 VRVDAERNLLLIKGAIPGSKGGD-VVVRPAIKA 212


>gi|218294754|ref|ZP_03495608.1| ribosomal protein L3 [Thermus aquaticus Y51MC23]
 gi|218244662|gb|EED11186.1| ribosomal protein L3 [Thermus aquaticus Y51MC23]
          Length = 206

 Score =  161 bits (408), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 97/210 (46%), Positives = 123/210 (58%), Gaps = 7/210 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  K+GMT +Y  E R IPVTV+    C VV  RT +K+GY AVQ+G    K   V++
Sbjct: 3   GILGTKVGMTRIYR-EDRAIPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLAQKPGRVNR 61

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           PM+G F+   V P + L E R     D  P G V +   F  G+ VDVTG + G+G +G 
Sbjct: 62  PMKGHFAKAGVQPVRILKEIR-----DFNPEGDVVTVEIFKPGERVDVTGTSKGRGTAGV 116

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR NF G   +HG    HR  GS G R+ PGRV+K KKMAG  G  RVTV NLEVV V 
Sbjct: 117 MKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGHYGAERVTVVNLEVVDVI 176

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +  L+LVKG VPG      ++VR + K A
Sbjct: 177 PEENLLLVKGAVPGP-NGGLVVVRQTKKVA 205


>gi|77918315|ref|YP_356130.1| 50S ribosomal protein L3 [Pelobacter carbinolicus DSM 2380]
 gi|109893533|sp|Q3A6P7|RL3_PELCD RecName: Full=50S ribosomal protein L3
 gi|77544398|gb|ABA87960.1| LSU ribosomal protein L3P [Pelobacter carbinolicus DSM 2380]
          Length = 210

 Score =  161 bits (408), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 91/211 (43%), Positives = 126/211 (59%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT V+ ++G+ IPVTV+    C V+  +T +K+GY A+Q+G G  K ++
Sbjct: 1   MTKGILGKKLGMTQVFAVDGKCIPVTVVEAGPCVVLQKKTEEKDGYNALQLGFGAKKTQS 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP  G F        + L E   +  DD      +    +F  G ++DVTG + GKGF
Sbjct: 61  VNKPAMGHFKKSGKGAFEFLREVECENIDDHAVGDEITCDGFFATGDVIDVTGTSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G RA+HG S+ HR  G  G    P RVFK KKMAG+MG  RVT + LEVV
Sbjct: 121 QGVIKRWNFAGGRASHG-SMFHRRPGGIGASAWPSRVFKGKKMAGQMGNKRVTTQGLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            V  ++ L+L+KG VPG   N  +L+R S K
Sbjct: 180 DVRPEKSLVLIKGAVPGP-VNGLLLIRKSRK 209


>gi|46199630|ref|YP_005297.1| 50S ribosomal protein L3 [Thermus thermophilus HB27]
 gi|55981661|ref|YP_144958.1| 50S ribosomal protein L3 [Thermus thermophilus HB8]
 gi|1710559|sp|P52860|RL3_THETH RecName: Full=50S ribosomal protein L3
 gi|62287202|sp|Q5SHN8|RL3_THET8 RecName: Full=50S ribosomal protein L3
 gi|81830573|sp|Q72I04|RL3_THET2 RecName: Full=50S ribosomal protein L3
 gi|116668236|pdb|2J01|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Mrna, Trna And Paromomycin (Part 2 Of 4).
           This File Contains The 50s Subunit From Molecule I.
 gi|116668297|pdb|2J03|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Mrna, Trna And Paromomycin (Part 4 Of 4).
           This File Contains The 50s Subunit From Molecule Ii.
 gi|119389737|pdb|2HGJ|E Chain E, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
           Showing How The 16s 3'-End Mimicks Mrna E And P Codons.
           This Entry 2hgj Contains 50s Ribosomal Subunit. The 30s
           Ribosomal Subunit Can Be Found In Pdb Entry 2hgi.
 gi|119389794|pdb|2HGQ|E Chain E, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
           With Translocated And Rotated Shine-Dalgarno Duplex.
           This Entry 2hgq Contains 50s Ribosomal Subunit. The 30s
           Ribosomal Subunit Can Be Found In Pdb Entry 2hgp.
 gi|119389850|pdb|2HGU|E Chain E, 70s T.Th. Ribosome Functional Complex With Mrna And E- And
           P-Site Trnas At 4.5a. This Entry 2hgu Contains 50s
           Ribosomal Subunit. The 30s Ribosomal Subunit Can Be
           Found In Pdb Entry 2hgr.
 gi|149240888|pdb|1VSA|C Chain C, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals
           Functional Interactions And Rearrangements. This File,
           1vsa, Contains The 50s Ribosome Subunit. 30s Ribosome
           Subunit Is In The File 2ow8
 gi|157836523|pdb|2V47|E Chain E, Structure Of The Ribosome Recycling Factor Bound To The
           Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
           Trna-Fmet (Part 2 Of 4). This File Contains The 50s
           Subunit For Molecule 1.
 gi|157836579|pdb|2V49|E Chain E, Structure Of The Ribosome Recycling Factor Bound To The
           Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
           Trna-Fmet (Part 4 Of 4). This File Contains The 50s
           Subunit Of Molecule 2.
 gi|160285430|pdb|1VSP|C Chain C, Interactions And Dynamics Of The Shine-Dalgarno Helix In
           The 70s Ribosome. This File, 1vsp, Contains The 50s
           Ribosome Subunit. 30s Ribosome Subunit Is In The File
           2qnh
 gi|209156521|pdb|3D5B|E Chain E, Structural Basis For Translation Termination On The 70s
           Ribosome. This File Contains The 50s Subunit Of One 70s
           Ribosome. The Entire Crystal Structure Contains Two 70s
           Ribosomes As Described In Remark 400.
 gi|209156575|pdb|3D5D|E Chain E, Structural Basis For Translation Termination On The 70s
           Ribosome. This File Contains The 50s Subunit Of The
           Second 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes As Described In Remark 400.
 gi|211938857|pdb|2JL6|E Chain E, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome (Part 2 Of 4). This File
           Contains The 50s Subunit.
 gi|211938915|pdb|2JL8|E Chain E, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome (Part 4 Of 4). This File
           Contains The 50s Subunit.
 gi|218766798|pdb|3F1F|E Chain E, Crystal Structure Of A Translation Termination Complex
           Formed With Release Factor Rf2. This File Contains The
           50s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes As Described In
           Remark 400.
 gi|218766854|pdb|3F1H|E Chain E, Crystal Structure Of A Translation Termination Complex
           Formed With Release Factor Rf2. This File Contains The
           50s Subunit Of The Second 70s Ribosome. The Entire
           Crystal Structure Contains Two 70s Ribosomes As
           Described In Remark 400.
 gi|226887438|pdb|2WDI|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome In
           Complex With Mrna, Paromomycin, Acylated A-Site Trna,
           Deacylated P-Site Trna, And E-Site Trna. This File
           Contains The 50s Subunit For Molecule I.
 gi|226887470|pdb|2WDJ|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome In
           Complex With Mrna, Paromomycin, Acylated A-Site Trna,
           Deacylated P-Site Trna, And E-Site Trna. This File
           Contains The 50s Subunit For Molecule Ii.
 gi|226887527|pdb|2WDL|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome In
           Complex With Mrna, Paromomycin, Acylated A- And P-Site
           Trnas, And E-Site Trna.  This File Contains The 50s
           Subunit For Molecule I.
 gi|226887584|pdb|2WDN|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome In
           Complex With Mrna, Paromomycin, Acylated A- And P-Site
           Trnas, And E-Site Trna.  This File Contains The 50s
           Subunit For Molecule Ii.
 gi|237823568|pdb|2WH2|E Chain E, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome
 gi|237823627|pdb|2WH4|E Chain E, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome
 gi|260100014|pdb|3HUX|E Chain E, Structure Of Ef-P Bound To The 70s Ribosome; This File
           Contains The 50s Subunit For Molecule I.
 gi|260100070|pdb|3HUZ|E Chain E, Structure Of Ef-P Bound To The 70s Ribosome; This File
           Contains The 50s Subunit For Molecule Ii.
 gi|261824523|pdb|2WRJ|E Chain E, The Structure Of The Ribosome With Elongation Factor G
           Trapped In The Post-Translocational State (Part 2 Of 4).
 gi|261824585|pdb|2WRL|E Chain E, The Structure Of The Ribosome With Elongation Factor G
           Trapped In The Post-Translocational State. (Part 4 Of
           4).
 gi|261824648|pdb|2WRO|E Chain E, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
           And Trna (Part 2 Of 4).
 gi|261824707|pdb|2WRR|E Chain E, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
           And Trna (Part 4 Of 4).
 gi|281307195|pdb|3KIR|E Chain E, Structure Of Rele Nuclease Bound To The 70s Ribosome
           (Precleavage State; Part 2 Of 4)
 gi|281307253|pdb|3KIT|E Chain E, Structure Of Rele Nuclease Bound To The 70s Ribosome
           (Precleavage State; Part 4 Of 4)
 gi|281307311|pdb|3KIW|E Chain E, Structure Of Rele Nuclease Bound To The 70s Ribosome
           (Postcleavage State; Part 2 Of 4)
 gi|281307369|pdb|3KIY|E Chain E, Structure Of Rele Nuclease Bound To The 70s Ribosome
           (Postcleavage State; Part 4 Of 4)
 gi|288965633|pdb|3KNI|E Chain E, The Structures Of Viomycin Bound To The 70s Ribosome. This
           File Contains The 50s Subunit For Molecule I
 gi|288965665|pdb|3KNK|E Chain E, The Structures Of Viomycin Bound To The 70s Ribosome. This
           File Contains The 50s Subunit For Molecule Ii.
 gi|288965697|pdb|3KNM|E Chain E, The Structures Of Capreomycin Bound To The 70s Ribosome.
           Thi Contains The 50s Subunit For Molecule I.
 gi|288965729|pdb|3KNO|E Chain E, The Structures Of Capreomycin Bound To The 70s Ribosome.
           Thi Contains The 50s Subunit For Molecule Ii
 gi|294979477|pdb|3I8F|E Chain E, Elongation Complex Of The 70s Ribosome With Three Trnas
           And Entry 3i8f Contains 50s Ribosomal Subunit. The 30s
           Ribosoma Can Be Found In Pdb Entry 3i8g. Molecule B In
           The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f
           (50s).
 gi|294979557|pdb|3I8I|E Chain E, Elongation Complex Of The 70s Ribosome With Three Trnas
           And Entry 3i8i Contains 50s Ribosomal Subnit. The 30s
           Ribosomal Can Be Found In Pdb Entry 3i8h. Molecule A In
           The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g
           (30s).
 gi|294979615|pdb|3I9C|E Chain E, Initiation Complex Of 70s Ribosome With Two Trnas And
           Mrna. 3i9c Contains 50s Ribosomal Subunit Of Molecule B.
           The 30s Subunit Can Be Found In Pdb Entry 3i9b. Molecule
           A In The S Asymmetric Unit Is Deposited As 3i9d (30s)
           And 3i9e (50s)
 gi|294979669|pdb|3I9E|E Chain E, Initiation Complex Of 70s Ribosome With Two Trnas And
           Mrna. 3i9e Contains 50s Ribosomal Subunit Of Molecule A.
           The 30s Subunit Can Be Found In Pdb Entry 3i9d. Molecule
           B In The S Asymmetric Unit Is Deposited As 3i9b (30s)
           And 3i9c (50s)
 gi|295982114|pdb|2X9S|E Chain E, Structure Of The 70s Ribosome Bound To Release Factor 2
           And A Substrate Analog Provides Insights Into Catalysis
           Of Peptide Release
 gi|295982173|pdb|2X9U|E Chain E, Structure Of The 70s Ribosome Bound To Release Factor 2
           And A Substrate Analog Provides Insights Into Catalysis
           Of Peptide Release
 gi|300508632|pdb|3MRZ|D Chain D, Recognition Of The Amber Stop Codon By Release Factor Rf1.
           This Entry 3mrz Contains 50s Ribosomal Subunit. The 30s
           Ribosomal Subunit Can Be Found In Pdb Entry 3ms0.
           Molecule A In The Same Asymmetric Unit Is Deposited As
           3mr8 (50s) And 3ms1 (30s).
 gi|300508687|pdb|3MS1|D Chain D, Recognition Of The Amber Stop Codon By Release Factor Rf1.
           This Entry 3ms1 Contains 50s Ribosomal Subunit. The 30s
           Ribosomal Subunit Can Be Found In Pdb Entry 3mr8.
           Molecule B In The Same Asymmetric Unit Is Deposited As
           3mrz (50s) And 3ms0 (30s).
 gi|307568001|pdb|2XG0|E Chain E, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
           70s Ribosome (Part 2 Of 4)
 gi|307568059|pdb|2XG2|E Chain E, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
           70s Ribosome (Part 4 Of 4)
 gi|309320289|pdb|3OH5|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Chloramphenicol. This File Contains The
           50s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|309320319|pdb|3OH7|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Chloramphenicol. This File Contains The
           50s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|309320391|pdb|3OHJ|E Chain E, Structure Of The Thermus Thermophilus Ribosome Complexed
           With Erythromycin. This File Contains The 50s Subunit Of
           One 70s Ribosome. The Entire Crystal Structure Contains
           Two 70s Ribosomes.
 gi|309320421|pdb|3OHK|E Chain E, Structure Of The Thermus Thermophilus Ribosome Complexed
           With Erythromycin. This File Contains The 50s Subunit Of
           One 70s Ribosome. The Entire Crystal Structure Contains
           Two 70s Ribosomes.
 gi|309320472|pdb|3OHZ|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Azithromycin. This File Contains The 50s
           Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|309320523|pdb|3OI1|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Azithromycin. This File Contains The 50s
           Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|309320574|pdb|3OI3|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Telithromycin. This File Contains The 50s
           Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|309320625|pdb|3OI5|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Telithromycin. This File Contains The 50s
           Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|312207713|pdb|2XQE|E Chain E, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s
           Ribosome With A Gtp Analog
 gi|313754037|pdb|2XTG|E Chain E, Trna Tranlocation On The 70s Ribosome: The        Pre-
           Translocational Translocation Intermediate Ti(Pre)
 gi|313754095|pdb|2XUX|E Chain E, Trna Tranlocation On The 70s Ribosome: The Post-
           Translocational Translocation Intermediate Ti(Post)
 gi|325533442|pdb|2Y0V|E Chain E, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
           Near-Cognate Codon On The 70s Ribosome
 gi|325533501|pdb|2Y0X|E Chain E, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
           Near-Cognate Codon On The 70s Ribosome
 gi|325533560|pdb|2Y0Z|E Chain E, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
           A Near-Cognate Codon On The 70s Ribosome
 gi|325533619|pdb|2Y11|E Chain E, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
           Cognate Codon On The 70s Ribosome.
 gi|325533678|pdb|2Y13|E Chain E, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
           A Near-Cognate Codon On The 70s Ribosome
 gi|325533737|pdb|2Y15|E Chain E, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
           A Cognate Codon On The 70s Ribosome.
 gi|325533796|pdb|2Y17|E Chain E, Ef-Tu Complex 3
 gi|325533855|pdb|2Y19|E Chain E, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
           Cognate Codon On The 70s Ribosome.
 gi|1143612|emb|CAA86408.1| ribosomal protein L3 [Thermus thermophilus]
 gi|46197256|gb|AAS81670.1| LSU ribosomal protein L3P [Thermus thermophilus HB27]
 gi|55773074|dbj|BAD71515.1| 50S ribosomal protein L3 [Thermus thermophilus HB8]
          Length = 206

 Score =  161 bits (408), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 93/210 (44%), Positives = 125/210 (59%), Gaps = 7/210 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  K+GMT ++  + R +PVTV+    C VV  RT +K+GY AVQ+G      K V++
Sbjct: 3   GILGVKVGMTRIFR-DDRAVPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLPQNPKRVNR 61

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+   V P + L E R     D  P G   +   F  G+ VDVTG + G+GF+G 
Sbjct: 62  PLKGHFAKAGVEPVRILREIR-----DFNPEGDTVTVEIFKPGERVDVTGTSKGRGFAGV 116

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR NF G   +HG    HR  GS G R+ PGRV+K KKMAG  G  RVTV NLEVV V 
Sbjct: 117 MKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGHYGAERVTVMNLEVVDVI 176

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +  L+LVKG VPG      ++VR++ K+A
Sbjct: 177 PEENLLLVKGAVPGP-NGGLVIVRETKKAA 205


>gi|15644248|ref|NP_229300.1| 50S ribosomal protein L3 [Thermotoga maritima MSB8]
 gi|148270422|ref|YP_001244882.1| 50S ribosomal protein L3 [Thermotoga petrophila RKU-1]
 gi|170289183|ref|YP_001739421.1| ribosomal protein L3 [Thermotoga sp. RQ2]
 gi|281412729|ref|YP_003346808.1| 50S ribosomal protein L3 [Thermotoga naphthophila RKU-10]
 gi|585886|sp|P38515|RL3_THEMA RecName: Full=50S ribosomal protein L3
 gi|166234605|sp|A5IM83|RL3_THEP1 RecName: Full=50S ribosomal protein L3
 gi|226730584|sp|B1LBP0|RL3_THESQ RecName: Full=50S ribosomal protein L3
 gi|4982064|gb|AAD36566.1|AE001798_31 ribosomal protein L3 [Thermotoga maritima MSB8]
 gi|437923|emb|CAA79777.1| ribosomal protein L3 [Thermotoga maritima]
 gi|147735966|gb|ABQ47306.1| LSU ribosomal protein L3P [Thermotoga petrophila RKU-1]
 gi|170176686|gb|ACB09738.1| ribosomal protein L3 [Thermotoga sp. RQ2]
 gi|281373832|gb|ADA67394.1| 50S ribosomal protein L3 [Thermotoga naphthophila RKU-10]
          Length = 207

 Score =  161 bits (408), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 93/205 (45%), Positives = 127/205 (61%), Gaps = 6/205 (2%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RK+GMT V+ +    +PVTV+    C VV  +T++K+GY AVQ+G    K K V+KP
Sbjct: 4   IIGRKIGMTRVF-VGNDSVPVTVIKAGPCVVVQKKTVEKDGYNAVQLGF--EKAKKVNKP 60

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + G F    V P K L EFRV+  D+  P G V     F  G+ VDVTG T G+GF+GAM
Sbjct: 61  LAGHFKKFGVEPMKILREFRVENPDEYEP-GQVIKVDVFEKGEYVDVTGWTKGRGFAGAM 119

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR  F G   +HG S  HR  GS G   +P +++K KKM GR G  RVTV+NL+VV +D 
Sbjct: 120 KRWGFSGGPKSHG-SKFHRELGSVGQHTEPAKIWKGKKMPGRYGNERVTVRNLQVVDIDP 178

Query: 185 KRGLILVKGCVPGAKKNSWILVRDS 209
           +  L++VKG VPGA +   +L+R +
Sbjct: 179 ENDLLVVKGGVPGA-RGGLVLIRSA 202


>gi|284992874|ref|YP_003411428.1| 50S ribosomal protein L3 [Geodermatophilus obscurus DSM 43160]
 gi|284066119|gb|ADB77057.1| 50S ribosomal protein L3 [Geodermatophilus obscurus DSM 43160]
          Length = 221

 Score =  161 bits (408), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 93/208 (44%), Positives = 120/208 (57%), Gaps = 2/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+    C V   RT + +GY AVQ+G GE   + V+K
Sbjct: 7   GLLGEKLGMTQVFDENNRIVPVTVVKAGPCVVTQVRTPEVDGYSAVQLGFGEIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V+P++ L E R  KD     VG   +   F     VDV G + GKG +G 
Sbjct: 67  PEGGHFTKAGVTPRRHLVELRT-KDASEYTVGQELTAEVFDGVAKVDVIGTSKGKGTAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GL A HG    HRS GS G    PGRVFK  +MAGRMG  + T  +L V  VD
Sbjct: 126 MKRHGFKGLGAAHGTQRKHRSPGSIGGASTPGRVFKGLRMAGRMGAVKTTTLSLTVHKVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +RGL+L+KG +PG  K   +LVR + K
Sbjct: 186 AERGLLLIKGAIPGP-KGGLVLVRSAVK 212


>gi|238921442|ref|YP_002934957.1| hypothetical protein NT01EI_3594 [Edwardsiella ictaluri 93-146]
 gi|238871011|gb|ACR70722.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 199

 Score =  161 bits (408), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 88/194 (45%), Positives = 121/194 (62%), Gaps = 1/194 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT ++  +G  IPVTV+ ++  +V   + LD +GY A+QV  G  K   V+KP  G F+ 
Sbjct: 1   MTRIFTEDGVSIPVTVIEIEANRVTQVKDLDNDGYRAIQVTTGSKKANRVTKPEAGHFAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             V   + L EFR+ + ++   +G   S   F   + VDVTG++ GKGF+G +KR NF  
Sbjct: 61  AGVEAGRVLREFRLSEGEEFT-IGQNISVEIFADVKKVDVTGISKGKGFAGTVKRWNFRT 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
             ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD +R L+LV
Sbjct: 120 QDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVDAERNLLLV 179

Query: 192 KGCVPGAKKNSWIL 205
           KG VPGA     I+
Sbjct: 180 KGAVPGATGGDLIV 193


>gi|224510783|pdb|3FIN|E Chain E, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas
           And Ef-Tu.Gdp.Kirromycin Ternary Complex, Fitted To A
           6.4 A Cryo-Em Map. This File Contains The 50s Subunit
          Length = 205

 Score =  161 bits (408), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 93/210 (44%), Positives = 125/210 (59%), Gaps = 7/210 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  K+GMT ++  + R +PVTV+    C VV  RT +K+GY AVQ+G      K V++
Sbjct: 3   GILGVKVGMTRIFR-DDRAVPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLPQNPKRVNR 61

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+   V P + L E R     D  P G   +   F  G+ VDVTG + G+GF+G 
Sbjct: 62  PLKGHFAKAGVEPVRILREIR-----DFNPEGDTVTVEIFKPGERVDVTGTSKGRGFAGV 116

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR NF G   +HG    HR  GS G R+ PGRV+K KKMAG  G  RVTV NLEVV V 
Sbjct: 117 MKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGHYGAERVTVMNLEVVDVI 176

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +  L+LVKG VPG      ++VR++ K+A
Sbjct: 177 PEENLLLVKGAVPGP-NGGLVIVRETKKAA 205


>gi|89893217|ref|YP_516704.1| 50S ribosomal protein L3 [Desulfitobacterium hafniense Y51]
 gi|123397902|sp|Q250N2|RL3_DESHY RecName: Full=50S ribosomal protein L3
 gi|89332665|dbj|BAE82260.1| 50S ribosomal protein L3 [Desulfitobacterium hafniense Y51]
          Length = 212

 Score =  161 bits (407), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 90/202 (44%), Positives = 123/202 (60%), Gaps = 3/202 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V+  EG  IPVTV+    C V+  +T   +GY A+QVG G  + +  +K
Sbjct: 7   GILGKKVGMTQVFTEEGHLIPVTVVEAGPCYVIQKKTKATDGYNAIQVGFGALRERLANK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G  +  +V P + + EFRV  D +   +G V +   F  G  VDV G++ GKGF+G 
Sbjct: 67  PQKGHVAKASVKPMRYIREFRVD-DVEAYEIGQVITAELFAAGDAVDVVGISKGKGFAGM 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KRH        HG S  HR  GS G +  P RVFK + + GRMGG RVTV+NL+VV VD
Sbjct: 126 IKRHGASRGPMKHG-SKYHRRTGSLGAK-GPARVFKGRNLPGRMGGERVTVQNLKVVRVD 183

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
             + +ILVKG VPGAKK+  IL
Sbjct: 184 ADKNMILVKGAVPGAKKSLLIL 205


>gi|118473190|ref|YP_885819.1| 50S ribosomal protein L3 [Mycobacterium smegmatis str. MC2 155]
 gi|166233163|sp|A0QSD1|RL3_MYCS2 RecName: Full=50S ribosomal protein L3
 gi|118174477|gb|ABK75373.1| ribosomal protein L3 [Mycobacterium smegmatis str. MC2 155]
          Length = 217

 Score =  161 bits (407), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 89/214 (41%), Positives = 128/214 (59%), Gaps = 7/214 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   + +PVTV+      V   RT +++GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTTERDGYSAVQLAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL----LPVGSVFSPSYFTVGQLVDVTGMTIG 117
            KP+ G F++  V+P++ + E R+  DD+       VG   +   F+ G  VDVTG + G
Sbjct: 63  IKPVAGQFAAAGVNPRRHVAELRL--DDEAAVAEYEVGQELTAEIFSDGAYVDVTGTSKG 120

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF+G MKRH F G  A HG    HR  GS G    PGRVFK  +M+GRMG +RVT +NL
Sbjct: 121 KGFAGTMKRHGFRGQGAAHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGNDRVTTQNL 180

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +V  VD + G++L+KG +PG +    ++VR + K
Sbjct: 181 KVHKVDAENGVLLIKGAIPG-RNGGLVVVRSAIK 213


>gi|289614454|emb|CBI58738.1| unnamed protein product [Sordaria macrospora]
          Length = 365

 Score =  161 bits (407), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 96/214 (44%), Positives = 127/214 (59%), Gaps = 17/214 (7%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+GV+A K GMT      G RIP TVL LD  Q+V ++T  KNGY AVQ+G  EAK   
Sbjct: 102 LRTGVLAVKKGMTVFMGKTGARIPCTVLQLDRVQIVANKTRAKNGYWAVQLGYYEAK--- 158

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
                        + PK+ L EF+V+  D LLPVG    P +F VGQ VDV G+T G GF
Sbjct: 159 ------------GIPPKQTLAEFKVRNQDGLLPVGVQLFPDWFHVGQRVDVRGITRGMGF 206

Query: 121 SGAMKRHNFGGLRATHGVSISHRS-HGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           +G MK+H F G  A+HG S +HR+     G +    RV   KKM GRMG  + TV+NL V
Sbjct: 207 AGGMKKHGFSGQEASHGNSKNHRTIGSVGGSQGSGSRVLPGKKMPGRMGAQQHTVQNLPV 266

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           + VD++ G+++VKG V G  K + + V+D+ K A
Sbjct: 267 LMVDNELGIVVVKGAVAG-HKGAVVKVQDAVKKA 299


>gi|33519658|ref|NP_878490.1| 50S ribosomal subunit protein L3 [Candidatus Blochmannia
           floridanus]
 gi|42559603|sp|Q7VQE8|RL3_BLOFL RecName: Full=50S ribosomal protein L3
 gi|33517321|emb|CAD83706.1| 50S ribosomal subunit protein L3 [Candidatus Blochmannia
           floridanus]
          Length = 219

 Score =  161 bits (407), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 86/195 (44%), Positives = 123/195 (63%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V RKLGMT + N EG  I VT++ +    V   +  +K+GY AVQV  G  + K ++
Sbjct: 2   DGLVGRKLGMTRIINEEGIMIAVTMIEILPHYVTQVKNKEKDGYCAVQVTTGNTRDKCLN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G    + ++  K L+EFR+   + L+ VG +F+         VDVTG++ GKGF+G
Sbjct: 62  KPKLGHLKKLGINYGKGLWEFRLNDSNRLISVGDIFTLKVLKCINKVDVTGISKGKGFAG 121

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF    A+HG S+SHR+ GS G  Q PG+VFK KKMAG +G  + T++NL V+++
Sbjct: 122 AVKRWNFRTQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGHLGYEKATIQNLAVINI 181

Query: 183 DDKRGLILVKGCVPG 197
           D K  L+LVKG +PG
Sbjct: 182 DIKNNLLLVKGAIPG 196


>gi|325104868|ref|YP_004274522.1| LSU ribosomal protein L3P [Pedobacter saltans DSM 12145]
 gi|324973716|gb|ADY52700.1| LSU ribosomal protein L3P [Pedobacter saltans DSM 12145]
          Length = 205

 Score =  161 bits (407), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 84/206 (40%), Positives = 127/206 (61%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++ EG+ IP TV+    C V   +T++ +GY AVQ+   E K KN +
Sbjct: 2   SGIIGKKVGMTSIFDAEGKNIPCTVIEAGPCVVTQVKTVETDGYAAVQLAYDEKKEKNTT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
             ++G F+    +PK+K+ EF+  + +  L  G V   + F  G  VDV G + GKGF G
Sbjct: 62  AALKGHFAKAGTAPKRKMVEFKYFEVEKTL--GEVVDVTLFEEGDYVDVVGTSKGKGFQG 119

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG+   THG     R+ GS G    P RVFK  +MAGR GG+RV ++NL++V 
Sbjct: 120 VVKRHGFGGVGMQTHGQHNRMRAPGSLGASSFPSRVFKGMRMAGRTGGSRVKIQNLQIVK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L++V G +PGA K S++L+ 
Sbjct: 180 VFAEQNLLVVSGSIPGA-KGSYVLIE 204


>gi|300868356|ref|ZP_07112982.1| 50S ribosomal protein L3 [Oscillatoria sp. PCC 6506]
 gi|300333649|emb|CBN58170.1| 50S ribosomal protein L3 [Oscillatoria sp. PCC 6506]
          Length = 211

 Score =  161 bits (407), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 87/197 (44%), Positives = 120/197 (60%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT V++ +GR IPVTV+    C V   +T   +GY A+QVG G+ K K 
Sbjct: 1   MSVGILGTKLGMTQVFDEQGRAIPVTVIQAGPCTVTQIKTKQTDGYAAIQVGYGDVKAKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP  G  +    +P + L E+R++ D     +G       FT GQ+VDV G +IGKGF
Sbjct: 61  LNKPELGHLAKSGATPVRHLQEYRLE-DIGEFQLGQQVKADLFTPGQIVDVIGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRHNF      HG S +HR  GS G    PGRV+  K+MAGR+G  ++TV+ L V+
Sbjct: 120 AGFQKRHNFKRGPMAHG-SKNHRQPGSIGPGTTPGRVYPGKRMAGRLGNVQITVRKLTVL 178

Query: 181 SVDDKRGLILVKGCVPG 197
            VD +R L+L+KG VPG
Sbjct: 179 RVDTERNLLLIKGAVPG 195


>gi|266620263|ref|ZP_06113198.1| 50S ribosomal protein L3 [Clostridium hathewayi DSM 13479]
 gi|288868166|gb|EFD00465.1| 50S ribosomal protein L3 [Clostridium hathewayi DSM 13479]
          Length = 211

 Score =  161 bits (407), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 93/214 (43%), Positives = 128/214 (59%), Gaps = 3/214 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++A K+GMT ++N +G   PVTVL    C V   +T + +GY AVQVG  + + K 
Sbjct: 1   MKKGILATKVGMTQIFNEDGVLTPVTVLLAGPCVVTQVKTAENDGYDAVQVGFVDKRAKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKP++G F    VS K+ + EF+ +   +   V        F  G  +D T ++ GKGF
Sbjct: 61  VSKPVKGHFDKAGVSYKRYVREFKFENASEY-SVKDEIKADIFAAGDKIDATAISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G   DP +VFK KKM G+MG  RVT++NLE+V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SKFHRHAGSNGSCSDPSKVFKGKKMPGQMGNKRVTIQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            VD +  LILVKG VPG KK S + ++++ K+AV
Sbjct: 179 KVDAENNLILVKGAVPGPKK-SLVTIKETVKAAV 211


>gi|296119209|ref|ZP_06837779.1| 50S ribosomal protein L3 [Corynebacterium ammoniagenes DSM 20306]
 gi|295967835|gb|EFG81090.1| 50S ribosomal protein L3 [Corynebacterium ammoniagenes DSM 20306]
          Length = 217

 Score =  161 bits (407), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 84/213 (39%), Positives = 123/213 (57%), Gaps = 2/213 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT V++ E R +PVTV+    C V   RT++ +GY A+Q+  GE   +  +K
Sbjct: 7   GILGKKLGMTQVFDEENRVVPVTVVEAGPCVVTQIRTVENDGYNAIQIAYGEIDPRKANK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ + E R+  D     VG   +   F     VDVTG + G G++GA
Sbjct: 67  PASGHFKKAGVTPRRHVAEIRMD-DVTAYEVGQDVTVEVFEGITFVDVTGTSKGHGYAGA 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G  A HG   +HR  G  G    PGRVFK K+MAGRMG +RVT +NL++  +D
Sbjct: 126 MKRHGFAGQGAAHGNQAAHRRVGGIGGAATPGRVFKGKRMAGRMGSDRVTTQNLKIQKID 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            +  L+L+KG +PG  +   + V+ + K   + 
Sbjct: 186 AESNLLLIKGAIPGV-RGGLVTVKTAVKGGAHA 217


>gi|295698649|ref|YP_003603304.1| ribosomal protein L3 [Candidatus Riesia pediculicola USDA]
 gi|291157291|gb|ADD79736.1| ribosomal protein L3 [Candidatus Riesia pediculicola USDA]
          Length = 208

 Score =  161 bits (407), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 85/202 (42%), Positives = 123/202 (60%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++   G  IP+TV+ ++  +V     L KNGY +VQV +G  K K +  
Sbjct: 3   GLIGKKIGMTRIFMKNGMAIPITVIQVEENRVTQVGILKKNGYRSVQVTSGIKKHKFLKS 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
              GFF  + V P K L EF+    ++   +G     S+ +  + +D++  + GKGF G 
Sbjct: 63  SEIGFFKKIVVDPGKILKEFKTNATNENYHIGQKIHLSFLSKFKRIDISSFSKGKGFCGT 122

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    A+HG S+SHR  GS G  Q PGRVFK KKMAG MG  +VT+K LE++ +D
Sbjct: 123 IKRWNFKAQDASHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGHMGNKKVTMKKLEIIQID 182

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
           +K+GLILVKG VPG    + I+
Sbjct: 183 EKKGLILVKGSVPGGTNCNLII 204


>gi|89902555|ref|YP_525026.1| 50S ribosomal protein L3 [Rhodoferax ferrireducens T118]
 gi|109893546|sp|Q21RV8|RL3_RHOFD RecName: Full=50S ribosomal protein L3
 gi|89347292|gb|ABD71495.1| LSU ribosomal protein L3P [Rhodoferax ferrireducens T118]
          Length = 228

 Score =  161 bits (407), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 90/219 (41%), Positives = 130/219 (59%), Gaps = 13/219 (5%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  EG  IPVTV+ + N +V   +T + +GY+A+QV  G  K   V+K
Sbjct: 8   GLLGRKVGMMRLFTDEGDSIPVTVVDVSNNRVTQVKTQENDGYVALQVTFGARKASRVTK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKD-------DDLLPVGSVFSPSYFTVGQLVDVTGMTI 116
           P  G  +   V   + + EFR+  D          +PV +VF+     VGQ VDV G TI
Sbjct: 68  PAAGHLAKAGVEAGEIIREFRLTADVAAQYKAGATVPVTAVFA-----VGQKVDVQGTTI 122

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           GKGF+G +KRH+    RA+HG S SH   GS G  QDPGRVF  K+M G +G + VT +N
Sbjct: 123 GKGFAGTIKRHHMKSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDDTVTTQN 182

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           L+V+ +D+ R L+++KG VPG+    ++ VR + K   N
Sbjct: 183 LDVIRIDEARQLLMIKGAVPGS-AGGFVTVRPAVKVKAN 220


>gi|225849548|ref|YP_002729713.1| 50S ribosomal protein L3 [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644163|gb|ACN99213.1| 50S ribosomal protein L3 [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 228

 Score =  161 bits (407), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++ + G+ +PVTV+    C V   R+ DK+GY AV +  GE K KN
Sbjct: 1   MPKGIIGKKIGMTRIF-VNGKAVPVTVVQAGPCYVTYLRSKDKDGYEAVALAFGERKEKN 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
             KP+   F   N+ P K + EF +++ + L     +     F  G LVDVTG + G+GF
Sbjct: 60  TPKPLLAIFKKANIKPAKVIKEFPLKEGETLELGQEIRVEQVFEKGDLVDVTGKSKGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +  MKR +F G   +HG    HR+ GS GCR +PGRV+K K+MAG  G   VTV  LEVV
Sbjct: 120 TSVMKRWDFAGFPKSHGHRY-HRAVGSIGCRTEPGRVWKTKRMAGHYGNETVTVLGLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            +  ++ +IL+KG +PGA  NS + +++S
Sbjct: 179 DIIPEKNVILLKGSIPGA-PNSTVFLKNS 206


>gi|237739366|ref|ZP_04569847.1| LSU ribosomal protein L3P [Fusobacterium sp. 2_1_31]
 gi|229422974|gb|EEO38021.1| LSU ribosomal protein L3P [Fusobacterium sp. 2_1_31]
          Length = 211

 Score =  161 bits (407), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT ++  +G+ +PVTV+      V+  +T +K+GY+A+Q+G  E K KN +
Sbjct: 2   SGILGKKIGMTQIFE-DGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   V P++ + E  V+  +    +G             VD+TG + GKG SG
Sbjct: 61  KPLMGIFNKAGVKPQRFVRELAVESVEGY-ELGQEIKVDVLAEVGYVDITGTSKGKGTSG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGG RA+HGVS +HR  GS G    PG+V K K+MAG+ G   VTV+NL+VV V
Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D +  L+L+KG VPGA KNS+++++ + K  +
Sbjct: 180 DVEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210


>gi|300782608|ref|YP_003762899.1| 50S ribosomal protein L3 [Amycolatopsis mediterranei U32]
 gi|299792122|gb|ADJ42497.1| large subunit ribosomal protein L3 [Amycolatopsis mediterranei U32]
          Length = 218

 Score =  160 bits (406), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 92/208 (44%), Positives = 120/208 (57%), Gaps = 2/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++ + R +PVTV+      V   RT DK+GY AVQ+  G    + V+K
Sbjct: 8   GILGTKLGMTQVFDEQNRVVPVTVVKAGPNVVTQVRTQDKDGYTAVQLAFGAVDPRKVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ L E R   D +   VG   +   F  G  VDVTG + GKG++G 
Sbjct: 68  PRTGHFDKAGVTPRRFLAELRT-TDAETYEVGQEITAEVFAAGVEVDVTGTSKGKGYAGV 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G  A+HG    HR  GS G    PGRVFK  +MAGRMG +RVT +NL V +V 
Sbjct: 127 MKRHGFKGQGASHGAQAVHRKPGSIGGCATPGRVFKGLRMAGRMGNDRVTTQNLTVHAVR 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
              GL+L+KG VPG  K   + VR + K
Sbjct: 187 ADDGLLLIKGAVPGP-KGGVLFVRSAAK 213


>gi|169335629|ref|ZP_02862822.1| hypothetical protein ANASTE_02049 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258367|gb|EDS72333.1| hypothetical protein ANASTE_02049 [Anaerofustis stercorihominis DSM
           17244]
          Length = 216

 Score =  160 bits (406), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 91/213 (42%), Positives = 127/213 (59%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A+K+GMT V++  G  IPVTVL    C V+  +T++K+GY AVQ+G GE   KN
Sbjct: 6   MKKAIMAKKVGMTQVFSETGEVIPVTVLQAGPCYVLQVKTVEKDGYEAVQLGYGEINEKN 65

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F    V P +K+ EFR   D      G+      F  G  +D+TG++ GKGF
Sbjct: 66  VNKPLKGHFEKAGVKPVRKIKEFRFD-DCSGYETGNEIKADVFEAGDKIDITGVSKGKGF 124

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S SHR  G+      PGRV K K M G MG  +VTV+NL VV
Sbjct: 125 QGAIKRHGQSRGPMGHG-SKSHRVVGAMSGASYPGRVMKGKNMPGHMGSEKVTVQNLTVV 183

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             D++  ++LVKG VPG+   S + + DS K++
Sbjct: 184 KADNENNMLLVKGAVPGS-NGSIVTITDSIKAS 215


>gi|262066304|ref|ZP_06025916.1| 50S ribosomal protein L3 [Fusobacterium periodonticum ATCC 33693]
 gi|294783642|ref|ZP_06748966.1| 50S ribosomal protein L3 [Fusobacterium sp. 1_1_41FAA]
 gi|291379999|gb|EFE87517.1| 50S ribosomal protein L3 [Fusobacterium periodonticum ATCC 33693]
 gi|294480520|gb|EFG28297.1| 50S ribosomal protein L3 [Fusobacterium sp. 1_1_41FAA]
          Length = 211

 Score =  160 bits (406), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT ++  +G+ +PVTV+      V+  +T +K+GY+A+Q+G  E K KN +
Sbjct: 2   SGILGKKIGMTQIFE-DGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   V P++ + E  V+  +    +G             VD+TG + GKG SG
Sbjct: 61  KPLMGIFNKAGVKPQRFVRELAVETVEGY-ELGQEIKVDVLAEVGYVDITGTSKGKGTSG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGG RA+HGVS +HR  GS G    PG+V K K+MAG+ G   VTV+NL+VV V
Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D +  L+L+KG VPGA KNS+++++ + K  +
Sbjct: 180 DVEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210


>gi|225175674|ref|ZP_03729668.1| ribosomal protein L3 [Dethiobacter alkaliphilus AHT 1]
 gi|225169003|gb|EEG77803.1| ribosomal protein L3 [Dethiobacter alkaliphilus AHT 1]
          Length = 213

 Score =  160 bits (406), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 93/217 (42%), Positives = 129/217 (59%), Gaps = 4/217 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT V+  EG+ IPVTV+    C VV  +T + +GY AVQ G G  K K+
Sbjct: 1   MQKAILGKKVGMTQVFTEEGKVIPVTVIEAGPCVVVQKKTKEVDGYDAVQFGYGAIKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP+ G F      PKK + E R++ D     VG       F  G  VD++G+T GKGF
Sbjct: 61  VTKPLAGHFKKAEQEPKKYIREMRLE-DTASYEVGQEVKADVFAEGDWVDISGVTRGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GA+KRH FG    THG S  HR  GS G   D  RVFK +K+ GRMGG +VTV+ L+VV
Sbjct: 120 AGAIKRHGFGRGPTTHG-SHYHRGPGSLGA-VDAARVFKGRKLPGRMGGVKVTVQKLKVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
            VD  R L+L+ G VPG  +   + ++++ K+    K
Sbjct: 178 KVDTDRNLLLIHGAVPGP-RGGLVTLKNTVKNVKEAK 213


>gi|224534796|ref|ZP_03675368.1| ribosomal protein L3 [Borrelia spielmanii A14S]
 gi|224514044|gb|EEF84366.1| ribosomal protein L3 [Borrelia spielmanii A14S]
          Length = 206

 Score =  160 bits (406), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 92/209 (44%), Positives = 130/209 (62%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++   G  +PVT++      ++  +T+D++GY A+  G+ + K   VSK
Sbjct: 3   GLIGKKVGMTQIFQKNGIVVPVTIIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKVSK 62

Query: 64  PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G + S+ ++ PKK + E    K  D    G       F   + VDVTG T GKGF G
Sbjct: 63  PIKGQYKSLKDIEPKKYVIEL---KGLDGYDAGDEIKVDVFKSVRYVDVTGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  A+HG S  HR  G TG    P R FK  KMAGRMGGN+ T++NLEVV +
Sbjct: 120 AMKRHNFSGGPASHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D+++  ILVKG VPGA K S+++V+ S K
Sbjct: 179 DEEKRAILVKGAVPGA-KGSFVVVKKSKK 206


>gi|311740077|ref|ZP_07713911.1| 50S ribosomal protein L3 [Corynebacterium pseudogenitalium ATCC
           33035]
 gi|311305150|gb|EFQ81219.1| 50S ribosomal protein L3 [Corynebacterium pseudogenitalium ATCC
           33035]
          Length = 218

 Score =  160 bits (406), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 85/213 (39%), Positives = 123/213 (57%), Gaps = 2/213 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT V++ + R +PVTV+    C V   RT + +GY A+Q+  GE   +  +K
Sbjct: 8   GILGKKLGMTQVFDEDNRVVPVTVVEAGPCVVTQIRTPETDGYSAIQIAFGEIDPRKANK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+P++ + E R+  D     VG       F     VDVTG T G G++GA
Sbjct: 68  PVGGHFKKAGVTPRRHVAEIRMD-DTSAYEVGQEVKVDIFEGITFVDVTGKTKGHGYAGA 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G  A HG   +HR  G  G    PGRVFK K+MAGRMG +RVT +NL++  +D
Sbjct: 127 MKRHGFAGQGAAHGNQAAHRRVGGIGGAATPGRVFKGKRMAGRMGHDRVTTQNLKIQKID 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            +  L+L+KG +PGA +   + V+ + K   + 
Sbjct: 187 AESNLLLIKGAIPGA-RGGLVTVKTAVKGGAHA 218


>gi|118616571|ref|YP_904903.1| 50S ribosomal protein L3 [Mycobacterium ulcerans Agy99]
 gi|166233167|sp|A0PM63|RL3_MYCUA RecName: Full=50S ribosomal protein L3
 gi|118568681|gb|ABL03432.1| 50S ribosomal protein L3 RplC [Mycobacterium ulcerans Agy99]
          Length = 217

 Score =  160 bits (406), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 88/212 (41%), Positives = 126/212 (59%), Gaps = 3/212 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   + +PVTV+      V   RT +++GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP+ G +++  V+P++ L E R+   + +    VG   +   F  G  VDVTG + GKG
Sbjct: 63  NKPVTGQYTAAGVNPRRHLAELRLDDAEAVTEYEVGQELTAEIFADGSYVDVTGTSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKRH F G  A+HG    HR  GS G    P RVFK  +MAGRMG +RVTV+NL V
Sbjct: 123 FAGTMKRHGFSGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             VD ++ ++L+KG VPG +    + VR + K
Sbjct: 183 HKVDAEQSVLLIKGAVPG-RTGGLVTVRSAIK 213


>gi|255326842|ref|ZP_05367918.1| 50S ribosomal protein L3 [Rothia mucilaginosa ATCC 25296]
 gi|283457543|ref|YP_003362126.1| 50S ribosomal protein L3 [Rothia mucilaginosa DY-18]
 gi|255296059|gb|EET75400.1| 50S ribosomal protein L3 [Rothia mucilaginosa ATCC 25296]
 gi|283133541|dbj|BAI64306.1| ribosomal protein L3 [Rothia mucilaginosa DY-18]
          Length = 218

 Score =  160 bits (406), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 88/210 (41%), Positives = 122/210 (58%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++ +G+ +PVTV+  D+  V   R  + +GY AVQ+G G    + V+K
Sbjct: 11  GLLGTKLGMTQVWDEDGKFVPVTVVKADSNVVTQIRNQETDGYEAVQIGFGAIDSRKVTK 70

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+P++ + E R   D     +G   +   F  GQ VDV G T GKGF+G 
Sbjct: 71  PLAGHFEKAGVTPRRHIVELRTA-DASEYSLGQELTVELFEAGQKVDVVGKTKGKGFAGV 129

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G+ A+HG   +HR  GS G    P RVFK  +MAGRMG  R T  NL +  VD
Sbjct: 130 MKRHGFKGVGASHGQHKNHRKPGSIGGASYPARVFKGMRMAGRMGAARHTTLNLTIQGVD 189

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +  ++L+KG +PG  K   +LVR + K A
Sbjct: 190 AENNVLLIKGAIPGP-KGGVVLVRTAVKGA 218


>gi|326332191|ref|ZP_08198471.1| 50S ribosomal protein L3 [Nocardioidaceae bacterium Broad-1]
 gi|325949897|gb|EGD41957.1| 50S ribosomal protein L3 [Nocardioidaceae bacterium Broad-1]
          Length = 218

 Score =  160 bits (406), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 89/208 (42%), Positives = 123/208 (59%), Gaps = 2/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT +++     +PVTV+  +   V   RT + +GY AVQ+G GE   + V+K
Sbjct: 9   GLLGTKLGMTQLWDENNVVVPVTVIAANTNVVTQVRTPEVDGYNAVQIGYGEIDGRKVNK 68

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F     +P++ L E R   D      G   S   F VG+ +DVTG + GKGF+G 
Sbjct: 69  PGAGQFEKAGTTPRRHLAEIRTA-DAASYSAGQELSVDTFAVGEEIDVTGTSKGKGFAGT 127

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G+ A+HG   +HR  GS G    PGRVFK  +MAG MG + VT +NL V +VD
Sbjct: 128 MKRHGFAGVSASHGAHRNHRKPGSIGACATPGRVFKGVRMAGHMGTDTVTTQNLTVHAVD 187

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            ++GLILVKG +PG  K   +++R + K
Sbjct: 188 TEKGLILVKGAIPG-PKGGLVVLRSAAK 214


>gi|325287048|ref|YP_004262838.1| 50S ribosomal protein L3 [Cellulophaga lytica DSM 7489]
 gi|324322502|gb|ADY29967.1| 50S ribosomal protein L3 [Cellulophaga lytica DSM 7489]
          Length = 205

 Score =  160 bits (406), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 90/206 (43%), Positives = 123/206 (59%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ RK+GMT +++  G+ IP TV+    C V   RT + +GY A+Q+G  +   K  +
Sbjct: 2   SGLIGRKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTEEVDGYNALQLGFDDKAEKRAN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F     SPKKK+ EF  Q  +    +G       F  G+ VDV G + GKGF G
Sbjct: 62  KAQMGHFKKAGTSPKKKVVEF--QDFEGEYKLGDTVGVDQFVEGEFVDVVGTSKGKGFQG 119

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG+ +ATHG     R+ GS G    P RVFK  KMAGRMGG RVTV+NL V  
Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGRMGGERVTVQNLRVYK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L++VKGCVPG  KN+++ ++
Sbjct: 180 VVPEKNLLVVKGCVPG-HKNAYVTIQ 204


>gi|169830436|ref|YP_001716418.1| ribosomal protein L3 [Candidatus Desulforudis audaxviator MP104C]
 gi|212288256|sp|B1I1I8|RL3_DESAP RecName: Full=50S ribosomal protein L3
 gi|169637280|gb|ACA58786.1| ribosomal protein L3 [Candidatus Desulforudis audaxviator MP104C]
          Length = 213

 Score =  160 bits (406), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 91/211 (43%), Positives = 126/211 (59%), Gaps = 4/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RKLGM+  +  EG  +PVT++    C VV  +T D +GY AVQ+G  E   K 
Sbjct: 4   MAKGILGRKLGMSRFFTAEGVAVPVTLIEAGPCTVVQKKTPDTDGYSAVQLGFMEQPAKR 63

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++P++G F    V P + L E RV    D   VG V     F VG++VDV G + GKGF
Sbjct: 64  VNRPLKGHFGRAGVKPSRFLRELRVADAAD-YEVGQVLKADLFDVGEIVDVVGTSKGKGF 122

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH F      HG S  HR  G+   +  P RVFK +K+ GR+GG RVTV+NLE+V
Sbjct: 123 AGGIKRHGFHRGPMGHG-SKYHRRPGALAAK-GPARVFKGRKLPGRLGGVRVTVQNLEIV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L+ V+G VPG  + S ++V+ + K
Sbjct: 181 KVDPERNLLAVRGAVPGI-RGSLVVVKSAVK 210


>gi|255282605|ref|ZP_05347160.1| 50S ribosomal protein L3 [Bryantella formatexigens DSM 14469]
 gi|255266898|gb|EET60103.1| 50S ribosomal protein L3 [Bryantella formatexigens DSM 14469]
          Length = 211

 Score =  160 bits (406), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 127/212 (59%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G   PVTVL    C V   +T++ +GY AVQVG  + + K 
Sbjct: 1   MKKAILATKVGMTQIFNDDGVLTPVTVLQAGPCVVTQIKTVENDGYSAVQVGYVDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F    VS K+ L EF++   ++   V        F  G  +D T ++ GKGF
Sbjct: 61  VNKPLKGHFDKAGVSYKRYLREFKLDNAEEY-QVAQEIKADIFAAGDKIDATAISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G   DP +VF+ KKMAG MG  RVT++NLEVV
Sbjct: 120 QGAIKRHGLHRGPMAHG-SKYHRHAGSNGACSDPSKVFRGKKMAGHMGHKRVTIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  L+LVKG VPG KK S + ++++ K+
Sbjct: 179 RVDAENNLLLVKGAVPGPKK-SLVSIKETVKA 209


>gi|213403778|ref|XP_002172661.1| 50S ribosomal protein L3 [Schizosaccharomyces japonicus yFS275]
 gi|212000708|gb|EEB06368.1| 50S ribosomal protein L3 [Schizosaccharomyces japonicus yFS275]
          Length = 264

 Score =  160 bits (406), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/198 (47%), Positives = 123/198 (62%), Gaps = 3/198 (1%)

Query: 2   RSGVVARKLGMTCVYNIEG-RRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           R G +  K GMT V++    +++PVTVL  D  QVV  +T  ++GY AVQ+GAG     N
Sbjct: 47  RPGAILFKKGMTSVWDESTHQQVPVTVLQFDRVQVVGLKTEKRDGYSAVQMGAGLRLPHN 106

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP-VGSVFSPSYFTVGQLVDVTGMTIGKG 119
           VS+ ++G FS+  V PK+ + EF+V KDD  LP VG+V +P YF VGQ VDV  +T GKG
Sbjct: 107 VSRALQGHFSANGVYPKRYVKEFQV-KDDSCLPKVGTVLTPEYFQVGQHVDVKALTKGKG 165

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            +G MKR    G   +HG S SHRS G TG  + P RV   KKM+G MG    TV+N+ V
Sbjct: 166 TAGVMKRWGLSGGNDSHGASKSHRSAGGTGQAKIPARVLPGKKMSGHMGHQFRTVQNMLV 225

Query: 180 VSVDDKRGLILVKGCVPG 197
            +V  +   ILVKG VPG
Sbjct: 226 WAVHPEHDCILVKGAVPG 243


>gi|163847923|ref|YP_001635967.1| 50S ribosomal protein L3 [Chloroflexus aurantiacus J-10-fl]
 gi|222525803|ref|YP_002570274.1| 50S ribosomal protein L3 [Chloroflexus sp. Y-400-fl]
 gi|189042836|sp|A9WH66|RL3_CHLAA RecName: Full=50S ribosomal protein L3
 gi|254803663|sp|B9LJD2|RL3_CHLSY RecName: Full=50S ribosomal protein L3
 gi|163669212|gb|ABY35578.1| ribosomal protein L3 [Chloroflexus aurantiacus J-10-fl]
 gi|222449682|gb|ACM53948.1| ribosomal protein L3 [Chloroflexus sp. Y-400-fl]
          Length = 210

 Score =  160 bits (405), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 89/211 (42%), Positives = 126/211 (59%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GM   +  +G  IPVTV+    C V   RT +++GY AVQ+G  E + + 
Sbjct: 1   MIHGLLGRKIGMMQYFTAQGMAIPVTVIAAGPCIVTQIRTPERDGYSAVQLGYEEVEPRK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G   +      + L EF         P G V +   F  GQ VD++G + G+GF
Sbjct: 61  LTKPQQGHLKASGGKMLRYLREFSADDPQAHTP-GEVVTVELFRPGQKVDISGTSKGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH F G   THG S  HR+ GS G    PGRV+K ++MAGRMGG RVT++NLEVV
Sbjct: 120 AGVVKRHGFRGGPKTHGQSDRHRAPGSIGAGTTPGRVWKGQRMAGRMGGTRVTIQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            V  ++ L+LVKG VPGA +N  + +R + K
Sbjct: 180 EVLPEQNLLLVKGSVPGA-RNGLLQIRKAVK 209


>gi|295109477|emb|CBL23430.1| 50S ribosomal protein L3, bacterial [Ruminococcus obeum A2-162]
          Length = 210

 Score =  160 bits (405), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 126/212 (59%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G+ IPVTVL    C V   +T + +GY AVQVG GE + K 
Sbjct: 1   MKKAILATKVGMTQIFNEDGQLIPVTVLQAGPCVVTQVKTEENDGYAAVQVGYGEIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G F    V+ ++ + EFR +   +   VG       F  G  +D T ++ GKGF
Sbjct: 61  VNKPEKGHFDKAGVAAQRFVKEFRFENAAEYT-VGQEIKADIFADGDHIDATAISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G   DP +VFK K M G MG  +VTV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKHMPGHMGNVQVTVQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  L+LVKG VPG KK S + ++++ KS
Sbjct: 179 RVDTENNLLLVKGAVPGPKK-SLVTIKETVKS 209


>gi|261749470|ref|YP_003257156.1| 50S ribosomal protein L3 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497563|gb|ACX84013.1| 50S ribosomal protein L3 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 210

 Score =  160 bits (405), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 86/208 (41%), Positives = 130/208 (62%), Gaps = 9/208 (4%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++   LGMT +++  G  IP T++ +  C V+  +T++K+GY A+Q+G  + K K+ +K
Sbjct: 3   GLIGINLGMTSLFSKNGENIPCTIVKVGPCYVIQVKTMEKDGYSAIQLGIIDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLP---VGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            ++G F    + PKKKL EF+    D L P   +GS  + + F  G+LVDV G+T GKGF
Sbjct: 63  ALQGHFRKSGIFPKKKLLEFK----DVLSPSIKLGSQININSFVEGELVDVRGITKGKGF 118

Query: 121 SGAMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            G +KRH F G+   +HG     R+ GS G   DP R+FK KKMAGRMGG  VT+KNL +
Sbjct: 119 QGVVKRHKFSGVGERSHGQHNRLRAPGSVGAGSDPSRIFKGKKMAGRMGGKHVTIKNLTI 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVR 207
           + +D    + ++ G VPG  KNS+++++
Sbjct: 179 LKIDVTENIFILNGSVPG-NKNSYLMIK 205


>gi|229821623|ref|YP_002883149.1| ribosomal protein L3 [Beutenbergia cavernae DSM 12333]
 gi|229567536|gb|ACQ81387.1| ribosomal protein L3 [Beutenbergia cavernae DSM 12333]
          Length = 220

 Score =  160 bits (405), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 84/211 (39%), Positives = 128/211 (60%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           + ++  KLGMT V++  GR +PVTV+ +    V   RT + +GY AVQ+  G+   + V+
Sbjct: 12  TALLGTKLGMTQVWDDAGRLVPVTVVQVGTNVVSAVRTPETDGYSAVQLAFGQIDPRKVT 71

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +P++G F+   V+P++ + E R     +  P G   +   F  GQ VDV G T GKG +G
Sbjct: 72  QPLKGHFAKAGVTPRRHVAEIRTGDAAEYTP-GQELTVEVFAAGQGVDVVGTTKGKGTAG 130

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    P RVF+  +MAGRMG +R TV+NL++ +V
Sbjct: 131 VMKRHGFSGVGASHGAHRNHRKAGSIGGASTPSRVFRGLRMAGRMGNDRHTVQNLKIHAV 190

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+LV G +PG  +   ++V+ + K A
Sbjct: 191 DAEKGLLLVTGALPG-PRGGLVVVKTASKEA 220


>gi|218135281|ref|ZP_03464085.1| hypothetical protein BACPEC_03186 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990666|gb|EEC56677.1| hypothetical protein BACPEC_03186 [Bacteroides pectinophilus ATCC
           43243]
          Length = 211

 Score =  160 bits (405), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 125/212 (58%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G   PVTVL    C V   +TL+ +GY AVQVG  + + K 
Sbjct: 1   MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTLENDGYEAVQVGFADKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+G F    VS K+ + EFR +   +   V        F  G  +D T ++ GKGF
Sbjct: 61  VNKPMKGHFDKAGVSYKRFVREFRFENASEY-NVKDEIKADIFAAGDKIDATAISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    PGRVFK K M G+MG  R+T++NLEVV
Sbjct: 120 QGAIKRHGQSRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGQMGAKRITIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  +ILVKG VPG KK S + ++++ K+
Sbjct: 179 RVDAENNIILVKGAVPGPKK-SLVTLKETVKT 209


>gi|315640161|ref|ZP_07895283.1| 50S ribosomal protein L3 [Enterococcus italicus DSM 15952]
 gi|315484138|gb|EFU74612.1| 50S ribosomal protein L3 [Enterococcus italicus DSM 15952]
          Length = 209

 Score =  160 bits (405), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/214 (45%), Positives = 131/214 (61%), Gaps = 8/214 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQLKTVENDGYEAVQVGYQDLREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
            +KP +G  +  N +PK+ + EF   KD +L  L VGS      F  G +VDVTG T GK
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KDVELEGLEVGSEIKVDAFQAGDIVDVTGTTKGK 117

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLE
Sbjct: 118 GFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLE 175

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +V VD +R +IL+KG VPGAKK S I ++ + K+
Sbjct: 176 IVRVDAERNVILIKGNVPGAKK-SLITIKSAVKA 208


>gi|159028206|emb|CAO89813.1| rplC [Microcystis aeruginosa PCC 7806]
          Length = 212

 Score =  160 bits (405), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 89/198 (44%), Positives = 119/198 (60%), Gaps = 3/198 (1%)

Query: 1   MRSGVVARKLGMTCVY-NIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT ++ N  G  IPVTV+    C V   +T   +GY ++QVG    K K
Sbjct: 1   MSIGILGTKLGMTQIFDNKTGVAIPVTVVQAGPCPVTQVKTKKTDGYESIQVGYKTVKEK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++KP+ G  +   VSP + L E+R++ D     +G   + + F  G LVDV G TIG+G
Sbjct: 61  ALNKPLLGHLAKAGVSPLRHLIEYRLE-DASAYTLGQEITAAIFQEGDLVDVAGTTIGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG  KRHNF     THG S +HR  GSTG    PGRVF  K+MAG+ G  +VT++ L V
Sbjct: 120 FSGYQKRHNFKRGNMTHG-SKNHRLPGSTGAGTTPGRVFPGKRMAGQYGSTQVTIRKLSV 178

Query: 180 VSVDDKRGLILVKGCVPG 197
           V +D +R LIL+KG VPG
Sbjct: 179 VKIDSERNLILIKGAVPG 196


>gi|153952861|ref|YP_001393626.1| 50S ribosomal protein L3 [Clostridium kluyveri DSM 555]
 gi|219853526|ref|YP_002470648.1| hypothetical protein CKR_0183 [Clostridium kluyveri NBRC 12016]
 gi|189042838|sp|A5N4P7|RL3_CLOK5 RecName: Full=50S ribosomal protein L3
 gi|254803666|sp|B9DYA9|RL3_CLOK1 RecName: Full=50S ribosomal protein L3
 gi|146345742|gb|EDK32278.1| RplC [Clostridium kluyveri DSM 555]
 gi|219567250|dbj|BAH05234.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 209

 Score =  160 bits (405), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 130/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +KLGMT ++N  GR IPVTV+    C VV  +T +K+GY ++Q+G G+ + K 
Sbjct: 1   MKKAILGKKLGMTQIFNENGRVIPVTVIEAGPCVVVQKKTEEKDGYKSIQIGFGDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F+   VS K+ L EF+V   D+   VG       F  G  +DV+G++ GKGF
Sbjct: 61  VNKPLKGHFAKSGVSLKRFLKEFKVDNIDE-YEVGQEIKADIFAEGDRIDVSGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G ++R N      +HG S  HR+ GS G   DP R FKNKKM G MG    TV NL+V 
Sbjct: 120 QGVIRRWNAQRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKKMPGHMGNKNTTVLNLQVA 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ +IL+KG VPG  K S++ ++D+ K+
Sbjct: 179 KVIPEKNIILIKGGVPGPNK-SFVSIKDTVKA 209


>gi|318042564|ref|ZP_07974520.1| 50S ribosomal protein L3 [Synechococcus sp. CB0101]
          Length = 215

 Score =  160 bits (404), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 86/197 (43%), Positives = 122/197 (61%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++ EGR IPVTV+    C++   +T   +GY AVQ+G G+ + K 
Sbjct: 1   MSIGILGKKLGMSQFFDDEGRSIPVTVIEAGPCRITQLKTDSTDGYTAVQLGFGDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G  +     P + L E+RV   D  L +G   + + F  GQ VDV+G TIG+GF
Sbjct: 61  VNKPAKGHLAKSGSEPLRHLKEYRVDTVDG-LELGGAITVAAFEAGQKVDVSGDTIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     THG S +HR  GSTG    PGRV+  K+MAGR GG ++T + L ++
Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRVYPGKRMAGRYGGKQITTRGLVIL 178

Query: 181 SVDDKRGLILVKGCVPG 197
            VD +R L++VKG VPG
Sbjct: 179 KVDAERNLLVVKGSVPG 195


>gi|125975384|ref|YP_001039294.1| 50S ribosomal protein L3P [Clostridium thermocellum ATCC 27405]
 gi|256005329|ref|ZP_05430295.1| ribosomal protein L3 [Clostridium thermocellum DSM 2360]
 gi|281419346|ref|ZP_06250361.1| 50S ribosomal protein L3 [Clostridium thermocellum JW20]
 gi|166233136|sp|A3DJH2|RL3_CLOTH RecName: Full=50S ribosomal protein L3
 gi|125715609|gb|ABN54101.1| LSU ribosomal protein L3P [Clostridium thermocellum ATCC 27405]
 gi|255990765|gb|EEU00881.1| ribosomal protein L3 [Clostridium thermocellum DSM 2360]
 gi|281406966|gb|EFB37229.1| 50S ribosomal protein L3 [Clostridium thermocellum JW20]
 gi|316939500|gb|ADU73534.1| 50S ribosomal protein L3 [Clostridium thermocellum DSM 1313]
          Length = 212

 Score =  160 bits (404), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 92/214 (42%), Positives = 132/214 (61%), Gaps = 6/214 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ RK+GMT V++ +G  IPVTV+      VV  +  + +GY +V+V  G+ + K 
Sbjct: 1   MEKFMLGRKIGMTQVFDEDGLLIPVTVIEAGPITVVQKKKPETDGYNSVRVAFGDVQEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G F+ + ++PKK + EFRV   D       +     F  G  VDVTG++ GKGF
Sbjct: 61  LNKPEKGLFAKLGIAPKKYIREFRVDDPDKYELKQEIKVEEMFQPGDRVDVTGISKGKGF 120

Query: 121 SGAMKRHNFGGLR--ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KR  FG  R   THG S+ HR  GS G   +P RVFK KK+ G MG  RVTV+NL+
Sbjct: 121 AGVIKR--FGNRRGKETHG-SMYHRRVGSMGANTNPARVFKGKKLPGHMGVERVTVQNLD 177

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VV VD +R L+LVKG VPGA K   ++++D+ K+
Sbjct: 178 VVKVDAERNLMLVKGAVPGA-KGGLLMIKDTVKA 210


>gi|120609041|ref|YP_968719.1| 50S ribosomal protein L3 [Acidovorax citrulli AAC00-1]
 gi|326315224|ref|YP_004232896.1| 50S ribosomal protein L3 [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|166233109|sp|A1TJ07|RL3_ACIAC RecName: Full=50S ribosomal protein L3
 gi|120587505|gb|ABM30945.1| LSU ribosomal protein L3P [Acidovorax citrulli AAC00-1]
 gi|323372060|gb|ADX44329.1| 50S ribosomal protein L3 [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 224

 Score =  160 bits (404), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 88/216 (40%), Positives = 128/216 (59%), Gaps = 13/216 (6%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  +PVTV+ + N +V   +T + +GY+A+QV  G  K   V+K
Sbjct: 8   GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVALQVTFGSRKASRVTK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDD-------LLPVGSVFSPSYFTVGQLVDVTGMTI 116
           P  G  +   V   + + EFRV  +          +PV  VFS     VGQ VDV G +I
Sbjct: 68  PEAGHLAKAGVEAGEIIREFRVTAETAGKYATGAAVPVADVFS-----VGQKVDVQGTSI 122

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           GKG++G +KRHN    RA+HG S SH   GS G  QDPGRVF  K+M G +G    T +N
Sbjct: 123 GKGYAGTIKRHNMASQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDATTTTQN 182

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           L+V+ VD+ R L+L+KG +PG+ K  ++ VR + K+
Sbjct: 183 LDVIRVDEARQLLLIKGAIPGS-KGGFVTVRPAVKA 217


>gi|51598732|ref|YP_072920.1| 50S ribosomal protein L3 [Borrelia garinii PBi]
 gi|81825630|sp|Q661E3|RL3_BORGA RecName: Full=50S ribosomal protein L3
 gi|51573303|gb|AAU07328.1| ribosomal protein L3 [Borrelia garinii PBi]
          Length = 206

 Score =  160 bits (404), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 93/209 (44%), Positives = 129/209 (61%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++   G  IPVTV+      ++  +T+D++GY A+  G+ + K   VSK
Sbjct: 3   GLIGKKVGMTQIFQKNGIVIPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKVSK 62

Query: 64  PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G + S+ ++ PKK + E    K  D    G       F   + VDVTG T GKGF G
Sbjct: 63  PIKGQYKSLKDIEPKKYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRMGGN+ T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNKQTIQNLEVVLI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D++   ILVKG VPGA K S+++V+ S K
Sbjct: 179 DEENRAILVKGAVPGA-KGSFVVVKKSKK 206


>gi|167629467|ref|YP_001679966.1| 50S ribosomal protein l3 [Heliobacterium modesticaldum Ice1]
 gi|212288399|sp|B0TC56|RL3_HELMI RecName: Full=50S ribosomal protein L3
 gi|167592207|gb|ABZ83955.1| 50S ribosomal protein l3 [Heliobacterium modesticaldum Ice1]
          Length = 210

 Score =  160 bits (404), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/211 (43%), Positives = 129/211 (61%), Gaps = 4/211 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           + G++ RK+GMT V+   G  +PVTV+    C VV  +T++K+GY AVQ+G G+ + K +
Sbjct: 3   KKGLLGRKIGMTQVFADNGVAVPVTVVQAGPCVVVQKKTVEKDGYEAVQIGFGDVREKLL 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP RG   +  V   + L E +V   D+   VG       F+ G+ VDV G + GKGF+
Sbjct: 63  NKPKRGHLKNAGVRLVRVLREIKVDSMDE-YKVGQELKADVFSAGEYVDVVGTSKGKGFA 121

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNF      HG S  HR  GS G +  P R+FK +KM GRMG  RVTV+ L+VV 
Sbjct: 122 GGIKRHNFKRGPMKHG-SKYHRRPGSAGAK-GPARIFKGRKMPGRMGNERVTVQKLQVVR 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VD +R L+L+KG VPG K+   +L++ S K+
Sbjct: 180 VDAERNLLLIKGAVPGPKR-GLLLIKSSIKA 209


>gi|213425750|ref|ZP_03358500.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
          Length = 199

 Score =  160 bits (404), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 89/187 (47%), Positives = 118/187 (63%), Gaps = 1/187 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+KP  G F+ 
Sbjct: 1   MTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVTKPEAGHFAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G +KR NF  
Sbjct: 61  AGVEAGRGLWEFRLAEGEEYT-VGQSISVELFADVKKVDVTGTSKGKGFAGTVKRWNFRT 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
             ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV VD +R L+LV
Sbjct: 120 QDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAERNLLLV 179

Query: 192 KGCVPGA 198
           KG VPGA
Sbjct: 180 KGGVPGA 186


>gi|187776576|ref|ZP_02993049.1| hypothetical protein CLOSPO_00090 [Clostridium sporogenes ATCC
           15579]
 gi|187775235|gb|EDU39037.1| hypothetical protein CLOSPO_00090 [Clostridium sporogenes ATCC
           15579]
          Length = 216

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 87/212 (41%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +KLGMT ++N  G+ IPVTV+    C V+  +T++K+GY A+QV  G+ + K 
Sbjct: 8   MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 67

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP++G F+   VS K+ + EF+++ D + L VG       F  G+ VD++G++ GKGF
Sbjct: 68  RNKPVKGHFAKAGVSVKRHIKEFKLE-DSNSLEVGQEIKADVFEAGERVDISGVSKGKGF 126

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G ++R N      THG S  HR+ GS G   DP R FKNK+M G MG    TV NLEVV
Sbjct: 127 QGTIRRWNAHRGPMTHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 185

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  ++ LIL+KG VPG  K   + +R++ K+
Sbjct: 186 RIIPEKNLILIKGGVPGPNK-GLVQIRNTVKA 216


>gi|216263354|ref|ZP_03435349.1| ribosomal protein L3 [Borrelia afzelii ACA-1]
 gi|215980198|gb|EEC21019.1| ribosomal protein L3 [Borrelia afzelii ACA-1]
          Length = 206

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/209 (44%), Positives = 130/209 (62%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++   G  +PVTV+      ++  +T+D++GY A+  G+ + K   VSK
Sbjct: 3   GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKVSK 62

Query: 64  PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G + S+ ++ PKK + E    K  D    G       F   + VDVTG T GKGF G
Sbjct: 63  PIKGQYKSLKDIEPKKYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRMGGN+ T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D+++  ILVKG VPGA K S+++V+ S K
Sbjct: 179 DEEKRAILVKGAVPGA-KGSFVVVKKSKK 206


>gi|118443770|ref|YP_877198.1| 50S ribosomal protein L3 [Clostridium novyi NT]
 gi|166233135|sp|A0PXU6|RL3_CLONN RecName: Full=50S ribosomal protein L3
 gi|118134226|gb|ABK61270.1| ribosomal protein L3 [Clostridium novyi NT]
          Length = 209

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 86/212 (40%), Positives = 130/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ RK+GMT +++  G+ IPVTV+    C V+  +T +K+GY A+QVG  + + K 
Sbjct: 1   MKKAIIGRKIGMTQIFDENGKVIPVTVVEAGPCAVLQKKTEEKDGYNAIQVGFEDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G F+   VS K+ + EFR++  D+   VG+      F  G  VDVTG++ GKGF
Sbjct: 61  ANKPKKGHFAKAGVSLKRIVREFRLENIDE-YEVGTEIKADVFAAGDKVDVTGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF      HG S  HR+ GS G   DP R FKNKKM G MG  + T+ N+EVV
Sbjct: 120 QGTIKRWNFHRGPMAHG-SKYHRAVGSMGAASDPSRTFKNKKMPGHMGNKKSTILNIEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V   + ++L+KG +PG  K  +++++D+ K+
Sbjct: 179 KVMADKNVLLIKGGIPGPNK-GYVVIKDTVKA 209


>gi|300742057|ref|ZP_07072078.1| 50S ribosomal protein L3 [Rothia dentocariosa M567]
 gi|311111973|ref|YP_003983195.1| 50S ribosomal protein L3 [Rothia dentocariosa ATCC 17931]
 gi|300381242|gb|EFJ77804.1| 50S ribosomal protein L3 [Rothia dentocariosa M567]
 gi|310943467|gb|ADP39761.1| 50S ribosomal protein L3 [Rothia dentocariosa ATCC 17931]
          Length = 218

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 88/210 (41%), Positives = 122/210 (58%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++ +G+ +PVTV+  D+  +   R  + +GY AVQ+G G    + V+K
Sbjct: 11  GLLGTKLGMTQVWDEDGKVVPVTVVKADSNVITQIRNQETDGYHAVQIGFGSIDSRKVTK 70

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+P++ L E R   D     +G   +   F  GQ VDV G T GKGF+G 
Sbjct: 71  PLAGHFEKAGVTPRRHLVELRTA-DAAEYSLGQELTVEMFEPGQKVDVVGKTKGKGFAGV 129

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G+ A+HG   +HR  GS G    P RVFK  +MAGRMG  R T  NL +  VD
Sbjct: 130 MKRHGFKGVGASHGQHKNHRKPGSIGGASYPARVFKGMRMAGRMGAARHTTLNLTIQGVD 189

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +  ++L+KG +PG  K   +LVR + K A
Sbjct: 190 AENNVLLIKGAIPGP-KGGVVLVRTAVKGA 218


>gi|167749439|ref|ZP_02421566.1| hypothetical protein EUBSIR_00393 [Eubacterium siraeum DSM 15702]
 gi|167657611|gb|EDS01741.1| hypothetical protein EUBSIR_00393 [Eubacterium siraeum DSM 15702]
 gi|291532093|emb|CBK97678.1| LSU ribosomal protein L3P [Eubacterium siraeum 70/3]
 gi|291558166|emb|CBL35283.1| LSU ribosomal protein L3P [Eubacterium siraeum V10Sc8a]
          Length = 211

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 87/215 (40%), Positives = 127/215 (59%), Gaps = 6/215 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT +++  G+ +PVTV+    C V   +T + +GY AVQ+G G+   K+
Sbjct: 1   MTKGLIGKKIGMTQIFDEAGKVVPVTVIEAGPCVVTQLKTAENDGYEAVQLGFGDVSPKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
            +KPM G F   ++  K+ L EFR+   DD+  + VG V     F  G ++DV+G++ GK
Sbjct: 61  TNKPMTGHFKKNDLPFKRTLKEFRL---DDISNVNVGDVLKADVFAAGDVIDVSGVSKGK 117

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF GA+KRHN   L+ THG     R  GS G    P R+FK K MAG MG   VTV+NL 
Sbjct: 118 GFQGAIKRHNQHRLKETHGTGPVVRQAGSMGACSSPSRIFKGKGMAGHMGAENVTVQNLV 177

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           +V +D +  LI +KG +PG  K   + + D+ K A
Sbjct: 178 IVKIDAENNLIAIKGAIPGP-KGGVVCITDAVKKA 211


>gi|168181864|ref|ZP_02616528.1| 50S ribosomal protein L3 [Clostridium botulinum Bf]
 gi|237796942|ref|YP_002864494.1| 50S ribosomal protein L3 [Clostridium botulinum Ba4 str. 657]
 gi|259647405|sp|C3KVQ1|RL3_CLOB6 RecName: Full=50S ribosomal protein L3
 gi|182674831|gb|EDT86792.1| 50S ribosomal protein L3 [Clostridium botulinum Bf]
 gi|229262333|gb|ACQ53366.1| 50S ribosomal protein L3 [Clostridium botulinum Ba4 str. 657]
          Length = 209

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 86/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +KLGMT ++N  G+ IPVTV+    C V+  +T++K+GY A+QV  G+ + K 
Sbjct: 1   MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP++G F+   VS K+ + EF+++ D + L +G       F  G+ VD++G++ GKGF
Sbjct: 61  RNKPVKGHFAKAGVSVKRHIKEFKLE-DSNSLEIGQEIKADVFEAGERVDISGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G ++R N      THG S  HR+ GS G   DP R FKNK+M G MG    TV NLEVV
Sbjct: 120 QGTIRRWNAHRGPMTHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  ++ LIL+KG VPG  K   + +R++ K+
Sbjct: 179 RIIPEKNLILIKGGVPGPNK-GLVQIRNTVKA 209


>gi|189501211|ref|YP_001960681.1| 50S ribosomal protein L3 [Chlorobium phaeobacteroides BS1]
 gi|226725147|sp|B3EP61|RL3_CHLPB RecName: Full=50S ribosomal protein L3
 gi|189496652|gb|ACE05200.1| ribosomal protein L3 [Chlorobium phaeobacteroides BS1]
          Length = 209

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 91/211 (43%), Positives = 124/211 (58%), Gaps = 5/211 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           + ++ +K+GMT +YN      P TV+    C V   +T + +GY A Q+  GE K   VS
Sbjct: 2   AAILGKKIGMTSIYNANREAEPCTVIQAGPCFVSQVKTTENDGYEAYQLSIGERKEAKVS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPV--GSVFSPSYFTVGQLVDVTGMTIGKGF 120
           KP+RG F+   ++P  K+ EF   KDD  L +  GS  S   F+ G  V+V G++ GKGF
Sbjct: 62  KPLRGHFAKAGIAPGYKVVEF--GKDDMGLDLEQGSAVSVEIFSAGDAVEVQGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNF G + THG S   R+ GS G   DP R FK  KM GRMGG  V VK LE+V
Sbjct: 120 AGVVKRHNFSGGQRTHGQSDRLRAPGSVGGASDPSRTFKGTKMGGRMGGKTVKVKGLEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            V  +  L+++KG VPG  KNS++ +  S K
Sbjct: 180 KVIPESNLLVIKGSVPGV-KNSYVQIVSSKK 209


>gi|153214894|ref|ZP_01949692.1| ribosomal protein L3 [Vibrio cholerae 1587]
 gi|124115053|gb|EAY33873.1| ribosomal protein L3 [Vibrio cholerae 1587]
          Length = 184

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 86/183 (46%), Positives = 116/183 (63%), Gaps = 1/183 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   V+K
Sbjct: 3   GLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGSKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR++  ++   VGS  +   F   + VDVTG + GKGF GA
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQGA 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD
Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181

Query: 184 DKR 186
            +R
Sbjct: 182 AER 184


>gi|78484640|ref|YP_390565.1| ribosomal protein L3 [Thiomicrospira crunogena XCL-2]
 gi|109893569|sp|Q31IY2|RL3_THICR RecName: Full=50S ribosomal protein L3
 gi|78362926|gb|ABB40891.1| LSU ribosomal protein L3P [Thiomicrospira crunogena XCL-2]
          Length = 212

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/213 (43%), Positives = 127/213 (59%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GV+  K+GMT V+N +G   PVTV+ +   ++   +  + +GY A+QV  G      
Sbjct: 1   MGIGVIGTKVGMTRVFNEDGVSTPVTVVEVSPNRITQIKNNETDGYDAIQVTFGSKHAGR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           VSKP  G ++   V   + L+EFR+    ++  L  GS  +   F    +VDV+G T GK
Sbjct: 61  VSKPEAGHYAKAGVEAGQGLWEFRLDDVSEVEGLEPGSEITVEKFNDVAVVDVSGTTKGK 120

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G +KRHNF    ATHG S+SHR+ GS G  Q PGRVFK KKMAG MG  + T  NLE
Sbjct: 121 GFQGGVKRHNFKMQDATHGNSVSHRAPGSIGQNQTPGRVFKGKKMAGHMGNVKQTTLNLE 180

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +V VD +  L+L+KG +PGA K S ++VR + K
Sbjct: 181 LVKVDVENSLLLIKGALPGA-KGSTVIVRKAIK 212


>gi|34811555|pdb|1PNU|B Chain B, Crystal Structure Of A Streptomycin Dependent Ribosome
           From Escherichia Coli, 50s Subunit Of 70s Ribosome. This
           File, 1pnu, Contains Only Molecules Of The 50s Ribosomal
           Subunit. The 30s Subunit, Mrna, P-Site Trna, And A-Site
           Trna Are In The Pdb File 1pns.
 gi|34811608|pdb|1PNY|B Chain B, Crystal Structure Of The Wild Type Ribosome From E. Coli,
           50s Subunit Of 70s Ribosome. This File, 1pny, Contains
           Only Molecules Of The 50s Ribosomal Subunit. The 30s
           Subunit Is In The Pdb File 1pnx.
 gi|56966347|pdb|1VOR|E Chain E, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           50s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|56966400|pdb|1VOU|E Chain E, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           50s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|56966453|pdb|1VOW|E Chain E, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           50s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|56966506|pdb|1VOY|E Chain E, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           50s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|56966559|pdb|1VP0|E Chain E, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           50s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400
          Length = 205

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/210 (42%), Positives = 123/210 (58%), Gaps = 7/210 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  K+GMT ++  + R IPVTV+    C +V  +T   +GY AVQ+G      + V+K
Sbjct: 3   GILGTKIGMTQIWKND-RAIPVTVVLAGPCPIVQRKTAQTDGYEAVQIGYAPKAERKVNK 61

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           PM+G F+   V+P + L EFR        P G   +   F  G+ +D TG + GKG  G 
Sbjct: 62  PMQGHFAKAGVAPTRILREFR-----GFAPDGDSVNVDIFAEGEKIDATGTSKGKGTQGV 116

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR NF G  A+HG    HR  GS G R+ PGRV+K K+MAG MG  RVTV+NLEVV + 
Sbjct: 117 MKRWNFAGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGHMGMERVTVQNLEVVEIR 176

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
               LILVKG +PGA     +++R + K++
Sbjct: 177 AGENLILVKGAIPGA-NGGLVVLRSAAKAS 205


>gi|253682166|ref|ZP_04862963.1| 50S ribosomal protein L3 [Clostridium botulinum D str. 1873]
 gi|253561878|gb|EES91330.1| 50S ribosomal protein L3 [Clostridium botulinum D str. 1873]
          Length = 209

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 130/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ RK+GMT +++  G+ IPVTV+    C V+  +T +K+GY A+QVG  + + K 
Sbjct: 1   MKKAIIGRKVGMTQIFDENGKVIPVTVVEAGPCAVLQKKTEEKDGYNAIQVGFEDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G F+   VS K+ + EFR++  D+   VGS      F  G  VDVTG++ GKGF
Sbjct: 61  ANKPKKGHFAKAGVSLKRIVREFRLENIDE-YEVGSEIKADVFEAGDKVDVTGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF      HG S  HR+ GS G   DP R FKNKKM G MG  + TV NLEVV
Sbjct: 120 QGTIKRWNFHRGPMAHG-SKYHRAVGSMGAASDPSRTFKNKKMPGHMGHKKSTVLNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V   + +IL+KG +PG  K  +++++++ K+
Sbjct: 179 KVMADKNVILIKGGIPGPNK-GYVVIKNTVKA 209


>gi|56751874|ref|YP_172575.1| 50S ribosomal protein L3 [Synechococcus elongatus PCC 6301]
 gi|81301041|ref|YP_401249.1| 50S ribosomal protein L3 [Synechococcus elongatus PCC 7942]
 gi|3122742|sp|O24689|RL3_SYNP6 RecName: Full=50S ribosomal protein L3
 gi|109893565|sp|Q31L07|RL3_SYNE7 RecName: Full=50S ribosomal protein L3
 gi|2446890|dbj|BAA22449.1| 50S ribosomal protein L3 [Synechococcus elongatus PCC 6301]
 gi|56686833|dbj|BAD80055.1| 50S ribosomal protein L3 [Synechococcus elongatus PCC 6301]
 gi|81169922|gb|ABB58262.1| LSU ribosomal protein L3P [Synechococcus elongatus PCC 7942]
          Length = 213

 Score =  159 bits (403), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 85/197 (43%), Positives = 116/197 (58%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT +++  G+ +PVTV+    C +   +T+  +GY A+Q+G  E + K 
Sbjct: 1   MSIGILGTKLGMTQIFDESGKAVPVTVIQAGPCPITQIKTVATDGYNAIQIGFLEVREKQ 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SKP  G  S     P + L E+RV   D  L +G   +   F  GQ VDV G TIG+GF
Sbjct: 61  LSKPELGHLSKAGAPPLRHLLEYRVPSTDG-LELGQALTADRFEAGQKVDVQGHTIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     +HG S +HR  GSTG    PGRV+  K+MAGR G ++ T++ L VV
Sbjct: 120 TGYQKRHGFARGPMSHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGRSGNDKTTIRGLTVV 178

Query: 181 SVDDKRGLILVKGCVPG 197
            VD  R L+LVKG VPG
Sbjct: 179 RVDADRNLLLVKGSVPG 195


>gi|89891148|ref|ZP_01202656.1| 50S ribosomal protein L3 (rplC) [Flavobacteria bacterium BBFL7]
 gi|89516792|gb|EAS19451.1| 50S ribosomal protein L3 (rplC) [Flavobacteria bacterium BBFL7]
          Length = 205

 Score =  159 bits (403), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 86/206 (41%), Positives = 127/206 (61%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ RK+GMT +Y+  G+ +P T++    C V   RT + +GY A+Q+G  +   KN S
Sbjct: 2   SGLIGRKIGMTSIYDENGKNMPCTIIEAGPCVVTQVRTEEVDGYSALQLGFDDKSDKNAS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K  +G F       KKK+ EF  Q  D++  +G   S   FT G+ +DV+G + GKGF G
Sbjct: 62  KAAQGHFKKAGTGVKKKVVEF--QGFDEVYKLGDAISVDIFTEGEFIDVSGTSKGKGFQG 119

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH F G+ +ATHG     R+ GS G    P RVFK  +MAG+MG  +V V+NL V+ 
Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGQMGNEKVKVENLRVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L++VKGCVPG  KNS+++++
Sbjct: 180 VVPEKNLLVVKGCVPG-HKNSYVILQ 204


>gi|110800321|ref|YP_697094.1| 50S ribosomal protein L3 [Clostridium perfringens ATCC 13124]
 gi|161485641|ref|NP_563321.2| 50S ribosomal protein L3 [Clostridium perfringens str. 13]
 gi|182626914|ref|ZP_02954647.1| ribosomal protein L3 [Clostridium perfringens D str. JGS1721]
 gi|42559666|sp|Q8XHS3|RL3_CLOPE RecName: Full=50S ribosomal protein L3
 gi|123049583|sp|Q0TMP6|RL3_CLOP1 RecName: Full=50S ribosomal protein L3
 gi|110674968|gb|ABG83955.1| 50S ribosomal protein L3 [Clostridium perfringens ATCC 13124]
 gi|177907704|gb|EDT70319.1| ribosomal protein L3 [Clostridium perfringens D str. JGS1721]
          Length = 209

 Score =  159 bits (403), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT +++  GR IPVTV+    C VV  +T++ +GY A+QVG GE + K 
Sbjct: 1   MKKAIIGKKVGMTQIFDENGRVIPVTVVEAGPCVVVQKKTVETDGYDAIQVGFGELREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G F+   VS ++ L EFR++ D     VG       F +G  VDV+G++ GKGF
Sbjct: 61  VNKPRKGHFAKAGVSLRRTLKEFRME-DVANYNVGDEIKVDTFEIGDKVDVSGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR N      +HG S  HR+ GS G   DP R FKNK+M G MG    TV NLEVV
Sbjct: 120 QGTIKRWNASRGPMSHG-SKFHRAPGSMGAASDPSRTFKNKRMPGHMGAKNTTVLNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  ++ +IL+KG +PG  K + +++R+S K+
Sbjct: 179 KIMPEKNIILIKGGIPGPNKGT-VVIRNSVKA 209


>gi|196228455|ref|ZP_03127322.1| ribosomal protein L3 [Chthoniobacter flavus Ellin428]
 gi|196227858|gb|EDY22361.1| ribosomal protein L3 [Chthoniobacter flavus Ellin428]
          Length = 215

 Score =  159 bits (403), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/207 (42%), Positives = 129/207 (62%), Gaps = 3/207 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +K+GMT VY+ +G+  PVTV+      V+  +T + +GY+ VQVG    K + 
Sbjct: 1   MKIGLLGKKIGMTRVYDDKGKATPVTVIEAGGNTVLQTKTQENDGYVGVQVGFDVQKEQR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++P+ G F      PKK + EFR+  DD  L      S S F VG +VDV G + GKGF
Sbjct: 61  VTQPLLGHFKKAGSEPKKLVKEFRL-PDDVKLDGALDLSVSQFAVGDVVDVIGRSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +++HN  G  A+HG S+ HR +G+ G R  PGR++KN  M G MG  RVTV+NL+VV
Sbjct: 120 QGVIRKHNMAGQGASHG-SMMHRRNGAIGNRSTPGRIWKNMGMPGHMGDERVTVQNLKVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207
            V  + G+IL+ G VPGA   ++I++R
Sbjct: 179 QVRPEEGVILISGAVPGA-NGTYIVIR 204


>gi|296392585|ref|YP_003657469.1| 50S ribosomal protein L3 [Segniliparus rotundus DSM 44985]
 gi|296179732|gb|ADG96638.1| 50S ribosomal protein L3 [Segniliparus rotundus DSM 44985]
          Length = 221

 Score =  159 bits (403), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/215 (41%), Positives = 125/215 (58%), Gaps = 6/215 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   R +PVTV+      V   RT +++ Y A+Q+  G    + V
Sbjct: 9   RVGLLGAKLGMTQVFDERNRVVPVTVIRTGVNVVTQVRTPERDKYSAIQLAFGHIDPRKV 68

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP+ G F    V+P++ L EFR+   DD+    VG     + F+ G LVDVTG + GKG
Sbjct: 69  NKPLAGQFEKAGVTPRRHLAEFRL---DDVSGYEVGQQIDATVFSAGDLVDVTGTSKGKG 125

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKRH F G  A+HG    HR  GS G    PGRVFK  +MAGRMG  + T +NL V
Sbjct: 126 FAGTMKRHGFKGQGASHGAHKVHRRPGSIGACAFPGRVFKGTRMAGRMGNAKTTTQNLTV 185

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
             VD + G++L+KG VPG +    + +R + K  V
Sbjct: 186 FRVDPEAGVLLIKGAVPG-RDGGLVFIRSAVKKGV 219


>gi|213964789|ref|ZP_03392988.1| 50S ribosomal protein L3 [Corynebacterium amycolatum SK46]
 gi|213952325|gb|EEB63708.1| 50S ribosomal protein L3 [Corynebacterium amycolatum SK46]
          Length = 218

 Score =  159 bits (403), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 88/213 (41%), Positives = 120/213 (56%), Gaps = 2/213 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT +++ E R +PVTV+    C V   RT + +GY AVQ+  GE   + V+K
Sbjct: 8   GILGTKLGMTQIFDEENRVVPVTVVEAGPCVVTQVRTKETDGYDAVQIAYGEIDPRKVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++   E R   D     VG       F   + VDVTG + G GF+G 
Sbjct: 68  PEAGHFKKAGVTPRRHSVEIRT-PDASSYEVGQSVGVDIFGEIEYVDVTGTSKGHGFAGG 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G  A HG   +HR  G  G    PGRVFK K+MAGRMG +RVT +NL++  VD
Sbjct: 127 MKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGKRMAGRMGNDRVTTQNLKIQKVD 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
               L+L+KG VPGA +   ++V+ + K   + 
Sbjct: 187 ADANLLLIKGAVPGA-RGGLLVVKTATKGGAHA 218


>gi|163752917|ref|ZP_02160041.1| 50S ribosomal protein L3 [Kordia algicida OT-1]
 gi|161326649|gb|EDP97974.1| 50S ribosomal protein L3 [Kordia algicida OT-1]
          Length = 205

 Score =  159 bits (403), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 87/206 (42%), Positives = 126/206 (61%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C V   RT + +GY A+Q+G  +   K  S
Sbjct: 2   SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTNEVDGYEALQLGFDDKAEKRAS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F     SPK K+ EF  Q  ++   +G   +  +F  G+ VDV G + GKGF G
Sbjct: 62  KAANGHFKKAGTSPKYKVVEF--QGFEEEYKLGDSITVEHFEEGEFVDVAGTSKGKGFQG 119

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG+ +ATHG     R+ GS G    P RVFK  +MAGRMGG +V V+NL V+ 
Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGEKVKVQNLRVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L++VKGCVPG  KN++++V+
Sbjct: 180 VVPEKNLLVVKGCVPG-HKNAYVIVQ 204


>gi|166368484|ref|YP_001660757.1| 50S ribosomal protein L3 [Microcystis aeruginosa NIES-843]
 gi|189042851|sp|B0JI03|RL3_MICAN RecName: Full=50S ribosomal protein L3
 gi|166090857|dbj|BAG05565.1| 50S ribosomal protein L3 [Microcystis aeruginosa NIES-843]
          Length = 212

 Score =  159 bits (403), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/198 (44%), Positives = 118/198 (59%), Gaps = 3/198 (1%)

Query: 1   MRSGVVARKLGMTCVY-NIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT ++ N  G  IPVTV+    C V   +T   +GY ++QVG    K K
Sbjct: 1   MSIGILGTKLGMTQIFDNKTGVAIPVTVVQAGPCPVTQVKTKKTDGYESIQVGYKTVKEK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++KP+ G  +   VSP + L E+R++ D     +G   +   F  G LVDV G TIG+G
Sbjct: 61  ALNKPLLGHLAKAGVSPLRHLIEYRLE-DASAYTLGQEITADIFQEGDLVDVAGTTIGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG  KRHNF     THG S +HR  GSTG    PGRVF  K+MAG+ G  +VT++ L V
Sbjct: 120 FSGYQKRHNFKRGNMTHG-SKNHRLPGSTGAGTTPGRVFPGKRMAGQYGSTQVTIRKLSV 178

Query: 180 VSVDDKRGLILVKGCVPG 197
           V +D +R LIL+KG VPG
Sbjct: 179 VKIDSERNLILIKGAVPG 196


>gi|56961932|ref|YP_173654.1| 50S ribosomal protein L3 [Bacillus clausii KSM-K16]
 gi|81822272|sp|Q5WLR2|RL3_BACSK RecName: Full=50S ribosomal protein L3
 gi|56908166|dbj|BAD62693.1| 50S ribosomal protein L3 [Bacillus clausii KSM-K16]
          Length = 206

 Score =  159 bits (403), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/212 (43%), Positives = 132/212 (62%), Gaps = 6/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+  +   V+  +T++ +GY A+Q+G  +AK  N
Sbjct: 1   MTKGILGRKIGMTQVFAENGEVIPVTVIEAEPNIVLQKKTVESDGYEAIQIGFADAKKPN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
             KP  G  +    +PK+ + E R    D++  VG   + + F  G LVDVTG + GKGF
Sbjct: 61  --KPATGHAAKAETAPKRFIKEIRGVNLDEV-EVGQAINVTTFAAGDLVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRHN      +HG S  HR  GS G    P RVFK K + GRMGG ++T++NLE+V
Sbjct: 118 QGAIKRHNQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKALPGRMGGEQITMQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD++R L+LVKG VPGAKK S++ V+ + K+
Sbjct: 176 RVDEERNLLLVKGNVPGAKK-SYVTVQSAVKA 206


>gi|322812575|pdb|3PYO|D Chain D, Crystal Structure Of A Complex Containing Domain 3 From
           The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
           File Contains The 50s Subunit Of The First 70s Ribosome.
 gi|322812628|pdb|3PYR|D Chain D, Crystal Structure Of A Complex Containing Domain 3 From
           The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
           File Contains The 50s Subunit Of The Second 70s
           Ribosome.
 gi|322812681|pdb|3PYT|D Chain D, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
           Igr Ires Rna Bound To The 70s Ribosome. This File
           Contains The 50s Subunit Of The First 70s Ribosome.
 gi|322812734|pdb|3PYV|D Chain D, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
           Igr Ires Rna Bound To The 70s Ribosome. This File
           Contains The 50s Subunit Of The Second 70s Ribosome
          Length = 204

 Score =  159 bits (403), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/209 (44%), Positives = 124/209 (59%), Gaps = 7/209 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  K+GMT ++  + R +PVTV+    C VV  RT +K+GY AVQ+G      K V++
Sbjct: 3   GILGVKVGMTRIFR-DDRAVPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLPQNPKRVNR 61

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+   V P + L E R     D  P G   +   F  G+ VDVTG + G+GF+G 
Sbjct: 62  PLKGHFAKAGVEPVRILREIR-----DFNPEGDTVTVEIFKPGERVDVTGTSKGRGFAGV 116

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR NF G   +HG    HR  GS G R+ PGRV+K KKMAG  G  RVTV NLEVV V 
Sbjct: 117 MKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGHYGAERVTVMNLEVVDVI 176

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  L+LVKG VPG      ++VR++ K+
Sbjct: 177 PEENLLLVKGAVPGP-NGGLVIVRETKKA 204


>gi|317131369|ref|YP_004090683.1| 50S ribosomal protein L3 [Ethanoligenens harbinense YUAN-3]
 gi|315469348|gb|ADU25952.1| 50S ribosomal protein L3 [Ethanoligenens harbinense YUAN-3]
          Length = 211

 Score =  159 bits (403), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/213 (41%), Positives = 128/213 (60%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +K+GMT +++  G  IPVTV+    C VV  +T++ +GY +VQ+G  E + K 
Sbjct: 1   MQKGIIGKKIGMTQLFDERGNVIPVTVIEAGPCVVVQKKTVEVDGYESVQLGFEEVREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G F    V+ K+ L EFR++ D   L VG +     F  G  VDV G + GKG+
Sbjct: 61  LNKPEKGHFEKAGVASKRVLREFRLE-DMSALNVGDIVKADVFAAGDRVDVAGTSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR     L+ THG    HR  GS G   +  RV K KKMAG+MG  RVTV+NL+VV
Sbjct: 120 AGVIKRWGHHRLKMTHGTGPVHREVGSMGASTNMSRVPKGKKMAGQMGNERVTVQNLDVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            VD +  LI +KG +PG  K   +++ DS K A
Sbjct: 180 KVDAENNLIALKGAIPGP-KGGIVILADSVKKA 211


>gi|226321110|ref|ZP_03796652.1| ribosomal protein L3 [Borrelia burgdorferi 29805]
 gi|226233520|gb|EEH32259.1| ribosomal protein L3 [Borrelia burgdorferi 29805]
 gi|312149724|gb|ADQ29795.1| ribosomal protein L3 [Borrelia burgdorferi N40]
          Length = 206

 Score =  159 bits (403), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 91/209 (43%), Positives = 130/209 (62%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++   G  IPVTV+      ++  +T+D++GY A+  G+ + K   VSK
Sbjct: 3   GLIGKKVGMTQIFQKNGIVIPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKVSK 62

Query: 64  PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G + S+ ++ PK+ + E    K  D    G       F   + VDVTG T GKGF G
Sbjct: 63  PIKGQYKSLKDIEPKRYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRMGGN+ T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D+++  +LVKG VPGA K S+++V+ S K
Sbjct: 179 DEEKRALLVKGAVPGA-KGSFVVVKKSKK 206


>gi|187918344|ref|YP_001883907.1| 50S ribosomal protein L3 [Borrelia hermsii DAH]
 gi|226725138|sp|B2S0I1|RL3_BORHD RecName: Full=50S ribosomal protein L3
 gi|119861192|gb|AAX16987.1| LSU ribosomal protein L3P [Borrelia hermsii DAH]
          Length = 209

 Score =  159 bits (402), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 134/212 (63%), Gaps = 6/212 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V+   G  +PVTV+  +   ++  +T++++GY A+ +G+ + K   +SK
Sbjct: 3   GLIGKKVGMTQVFQGNGVVVPVTVIEFEPNYIIGKKTVERDGYDALIMGSVDLKSSKISK 62

Query: 64  PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G + ++ NV PKK + EF+  K  D    G       F   + VD+TG T GKGF G
Sbjct: 63  PIKGQYKNLENVEPKKYVIEFKGLKGYD---AGDEVGLDAFKEIKYVDITGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  GSTG    P R FK  KMAGRMGG + T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGSTGQAATPSRTFKGTKMAGRMGGEQQTIQNLEVVFI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D+++  ILVKG VPG  K S+++V+ + K  V
Sbjct: 179 DEEKRAILVKGAVPGV-KGSFVIVKKAKKVGV 209


>gi|134103264|ref|YP_001108925.1| 50S ribosomal protein L3 [Saccharopolyspora erythraea NRRL 2338]
 gi|291007943|ref|ZP_06565916.1| 50S ribosomal protein L3 [Saccharopolyspora erythraea NRRL 2338]
 gi|166234589|sp|A4FPM5|RL3_SACEN RecName: Full=50S ribosomal protein L3
 gi|133915887|emb|CAM06000.1| 50S ribosomal protein L3 [Saccharopolyspora erythraea NRRL 2338]
          Length = 216

 Score =  159 bits (402), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 88/208 (42%), Positives = 122/208 (58%), Gaps = 2/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++ + R +PVTV+      V   RT +K+GY AVQ+  G    + V+K
Sbjct: 8   GILGTKLGMTQVFDDQNRVVPVTVVQAGPNVVTQIRTPEKDGYSAVQLAFGAIDPRKVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V+P++ + E R   D     VG   +   F  G +VDV G + GKGF+G 
Sbjct: 68  PRTGHFTKAGVTPRRHVVELRT-ADAGEYEVGQEVTAEVFEAGTVVDVVGTSKGKGFAGT 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G  A+HG    HR  GS G    PGRVFK  +M+GRMG +RVT +NL+V  V+
Sbjct: 127 MKRHGFRGQGASHGTQAVHRKPGSIGGCATPGRVFKGMRMSGRMGSDRVTTQNLKVHRVE 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            + GL+L+KG +PG  K   +LV+   K
Sbjct: 187 GESGLLLIKGAIPGP-KGGLVLVKSPAK 213


>gi|153210324|ref|ZP_01947604.1| ribosomal protein L3 [Coxiella burnetii 'MSU Goat Q177']
 gi|212218074|ref|YP_002304861.1| 50S ribosomal protein L3 [Coxiella burnetii CbuK_Q154]
 gi|226725156|sp|B6J5D2|RL3_COXB1 RecName: Full=50S ribosomal protein L3
 gi|120575146|gb|EAX31770.1| ribosomal protein L3 [Coxiella burnetii 'MSU Goat Q177']
 gi|212012336|gb|ACJ19716.1| LSU ribosomal protein L3P [Coxiella burnetii CbuK_Q154]
          Length = 217

 Score =  159 bits (402), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 88/212 (41%), Positives = 126/212 (59%), Gaps = 1/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK GMT ++   G  IPVTV+ +   ++   +T++ +GY A QV  G+     
Sbjct: 1   MSIGLIGRKCGMTRIFTETGSSIPVTVVEVIPNRITQVKTVETDGYRAFQVAYGKKSSAR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G +S   V     L EFR+  ++      G       F  GQ+VDV G+T GKG
Sbjct: 61  VNKPLAGHYSKAAVEAGNALREFRLGNEELTEAKAGDELKVDIFKEGQVVDVRGLTRGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRHNF    ATHG S+SHR+ GS G  Q PGRV+K KKMAG++G    TV++ E+
Sbjct: 121 FAGTVKRHNFRTQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGQLGNVYCTVQSQEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           + VD +R L+L+KG +PGA     I+ + S K
Sbjct: 181 IKVDVERNLLLIKGALPGAPGGEVIITQSSKK 212


>gi|218440623|ref|YP_002378952.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 7424]
 gi|226725159|sp|B7KHY7|RL3_CYAP7 RecName: Full=50S ribosomal protein L3
 gi|218173351|gb|ACK72084.1| ribosomal protein L3 [Cyanothece sp. PCC 7424]
          Length = 212

 Score =  159 bits (402), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/202 (44%), Positives = 120/202 (59%), Gaps = 3/202 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT +++ E G  IPVTV+H   C +   +T   +GY ++Q+G GE K K
Sbjct: 1   MSVGILGTKLGMTQIFDKETGIAIPVTVIHAGPCPITQVKTPATDGYNSIQIGYGEVKEK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++KP  G       +P + L E+R++   D   +G       F  G LVDV G TIG+G
Sbjct: 61  ALNKPKLGHLKKSASTPVRHLKEYRLENAADYQ-LGDGIKVDLFKPGDLVDVAGKTIGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G  KRHNF     THG S +HR  GSTG    PGRV+  K+MAGR GG +VT++ L V
Sbjct: 120 FAGYQKRHNFKRGSMTHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGRYGGTQVTIRKLTV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKN 201
           V +D +R LIL+KG VPG   N
Sbjct: 179 VQIDTERNLILIKGAVPGKPGN 200


>gi|313888808|ref|ZP_07822469.1| 50S ribosomal protein L3 [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845177|gb|EFR32577.1| 50S ribosomal protein L3 [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 210

 Score =  159 bits (402), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 86/198 (43%), Positives = 122/198 (61%), Gaps = 2/198 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           +V +K+GMT +++ EG   PV+V+ ++   VV  +T++ +GY A+QV   E K + ++KP
Sbjct: 4   LVGKKIGMTQIFDEEGIVTPVSVIEVEPNVVVQKKTIESDGYNAIQVATQEVKERRLNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
            +G      V  +K L EFR   D +   +G       F VG+ VDV G + GKG +G +
Sbjct: 64  EKGHLDKAGVGYRKHLSEFRTD-DVESYNLGDEIKVDLFEVGEHVDVVGTSKGKGTAGII 122

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHNFG  R THG S  HR  G  G    PG+V+KN +MAG+MG  RVTV+NLE+V +D 
Sbjct: 123 KRHNFGRGRETHG-SKFHRMPGGMGAASYPGKVWKNHRMAGKMGNERVTVQNLEIVRIDT 181

Query: 185 KRGLILVKGCVPGAKKNS 202
            + LILVKG +PG KK +
Sbjct: 182 DKNLILVKGAIPGPKKGT 199


>gi|219685094|ref|ZP_03539914.1| ribosomal protein L3 [Borrelia garinii Far04]
 gi|219673190|gb|EED30209.1| ribosomal protein L3 [Borrelia garinii Far04]
          Length = 206

 Score =  159 bits (402), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/209 (44%), Positives = 129/209 (61%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++   G  IPVTV+      ++  +T+D++GY A+  G+ + K   VSK
Sbjct: 3   GLIGKKVGMTQIFQKNGIVIPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKDSKVSK 62

Query: 64  PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G + S+ ++ PKK + E    K  D    G       F   + VDVTG T GKGF G
Sbjct: 63  PIKGQYKSLKDIEPKKYVIEL---KGLDGYDPGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRMGGN+ T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNKQTIQNLEVVLI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D++   ILVKG VPGA K S+++V+ S K
Sbjct: 179 DEENRAILVKGAVPGA-KGSFVVVKKSKK 206


>gi|189347703|ref|YP_001944232.1| 50S ribosomal protein L3 [Chlorobium limicola DSM 245]
 gi|226725145|sp|B3EGZ0|RL3_CHLL2 RecName: Full=50S ribosomal protein L3
 gi|189341850|gb|ACD91253.1| ribosomal protein L3 [Chlorobium limicola DSM 245]
          Length = 209

 Score =  159 bits (402), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 83/202 (41%), Positives = 125/202 (61%), Gaps = 1/202 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT +YN +   I  TV+    C V   ++ +K+GY A Q+G GE   K ++KP
Sbjct: 4   ILGKKIGMTRLYNDKREAISCTVIQAGPCFVTQVKSAEKDGYDAYQIGIGERDEKKINKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M+G +    V+P   + EF+  +  + L  G+  S   F  G+ V+V G++ GKGF+G +
Sbjct: 64  MQGHYRKAGVTPGFMMAEFKKTEFSENLEAGNPVSVESFKEGEKVNVLGVSKGKGFAGVV 123

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHNFGG   THG S   R+ GS G   DP R F+  +MAGRMGG+ +TVKNLE+V +  
Sbjct: 124 KRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFRGTRMAGRMGGDNITVKNLEIVKIMP 183

Query: 185 KRGLILVKGCVPGAKKNSWILV 206
           +  L+++KG VPG  KNS++ +
Sbjct: 184 ESNLLVIKGAVPGP-KNSYVKI 204


>gi|228989319|ref|ZP_04149310.1| 50S ribosomal protein L3 [Bacillus pseudomycoides DSM 12442]
 gi|228995501|ref|ZP_04155169.1| 50S ribosomal protein L3 [Bacillus mycoides Rock3-17]
 gi|229003126|ref|ZP_04160972.1| 50S ribosomal protein L3 [Bacillus mycoides Rock1-4]
 gi|228758089|gb|EEM07288.1| 50S ribosomal protein L3 [Bacillus mycoides Rock1-4]
 gi|228764230|gb|EEM13109.1| 50S ribosomal protein L3 [Bacillus mycoides Rock3-17]
 gi|228770397|gb|EEM18970.1| 50S ribosomal protein L3 [Bacillus pseudomycoides DSM 12442]
          Length = 210

 Score =  159 bits (402), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 94/211 (44%), Positives = 132/211 (62%), Gaps = 4/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGELIPVTVIAATPNVVLQKKTTETDGYNAIQLGFDDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  + +PK+ + E R   D D L VG       FT G++VDVTG++ GKGF
Sbjct: 61  TNKPEQGHTAKASTTPKRFIREIR-DADVDGLEVGQEVKVEVFTAGEIVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       +HG S  HR  GS G    P RVFK KK+AGRMGG++VT++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L+LVKG VPGAKK S ++V+ + K
Sbjct: 178 QVDAERNLLLVKGNVPGAKK-SLVVVQGAVK 207


>gi|227505216|ref|ZP_03935265.1| 50S ribosomal protein L3 [Corynebacterium striatum ATCC 6940]
 gi|227198190|gb|EEI78238.1| 50S ribosomal protein L3 [Corynebacterium striatum ATCC 6940]
          Length = 218

 Score =  159 bits (402), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 82/213 (38%), Positives = 121/213 (56%), Gaps = 2/213 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT +++ + R +PVTV+    C V   RT + +GY A+Q+  GE   +  +K
Sbjct: 8   GILGKKLGMTQIFDEDNRVVPVTVVEAGPCVVTQIRTAETDGYNAIQIAFGEIDPRKANK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ + E R+  D     VG   +   F     VDVTG T G G++GA
Sbjct: 68  PAAGHFKKAGVTPRRHVAEIRMD-DTSAYEVGQEVTADIFEGITFVDVTGTTKGHGYAGA 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G  A HG   +HR  G  G    P RVFK  +MAGRMG +RVT +NL++  +D
Sbjct: 127 MKRHGFAGQGAAHGNQAAHRRVGGIGACATPARVFKGTRMAGRMGQDRVTTQNLKIQKID 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            +  L+L+KG +PGA +   + V+ + K   + 
Sbjct: 187 AESNLLLIKGAIPGA-RGGLVTVKTAVKGGAHA 218


>gi|171913926|ref|ZP_02929396.1| 50S ribosomal protein L3 [Verrucomicrobium spinosum DSM 4136]
          Length = 212

 Score =  159 bits (402), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 93/211 (44%), Positives = 125/211 (59%), Gaps = 4/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT VY  +G  + VTV+ +   QVV  +  DK+GY AVQVG  E K   
Sbjct: 1   MSIGLIGKKVGMTQVYLKDGSAVAVTVIDVAGNQVVQVKNADKDGYTAVQVGYSEKKENR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SKP    F   N + K  + EFR   + +    GS      F  G+ VDV G T GKGF
Sbjct: 61  CSKPELEHFKKHNATAKYVVREFRT--EGEAPEAGSTLGADKFADGEYVDVIGTTKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG +KR+NF G  A+HG S+ HR  GS GCR  PGRV+KN+KM GR G +R T +NL+VV
Sbjct: 119 SGVVKRYNFKGQPASHG-SMMHRRTGSIGCRLTPGRVWKNQKMPGRHGFDRRTTQNLKVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
               + G++L+ G VPG    S+++VR + K
Sbjct: 178 QSRAEDGVLLIAGAVPGP-NGSYVIVRPAIK 207


>gi|18146071|dbj|BAB82111.1| 50S ribosomal protein L3 [Clostridium perfringens str. 13]
          Length = 216

 Score =  159 bits (402), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT +++  GR IPVTV+    C VV  +T++ +GY A+QVG GE + K 
Sbjct: 8   MKKAIIGKKVGMTQIFDENGRVIPVTVVEAGPCVVVQKKTVETDGYDAIQVGFGELREKL 67

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G F+   VS ++ L EFR++ D     VG       F +G  VDV+G++ GKGF
Sbjct: 68  VNKPRKGHFAKAGVSLRRTLKEFRME-DVANYNVGDEIKVDTFEIGDKVDVSGVSKGKGF 126

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR N      +HG S  HR+ GS G   DP R FKNK+M G MG    TV NLEVV
Sbjct: 127 QGTIKRWNASRGPMSHG-SKFHRAPGSMGAASDPSRTFKNKRMPGHMGAKNTTVLNLEVV 185

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  ++ +IL+KG +PG  K + +++R+S K+
Sbjct: 186 KIMPEKNIILIKGGIPGPNKGT-VVIRNSVKA 216


>gi|315320564|ref|YP_004072621.1| 50S ribosomal protein L3 [Thalassiosira oceanica CCMP1005]
 gi|283569037|gb|ADB27574.1| 50S ribosomal protein L3 [Thalassiosira oceanica CCMP1005]
          Length = 207

 Score =  159 bits (401), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 87/206 (42%), Positives = 122/206 (59%), Gaps = 2/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT +++  G  IPVT+L +  C V   +T   +GY A+QVG G    K+
Sbjct: 1   MSLGLLGNKIGMTQIFDESGNIIPVTILKVGPCIVTQVKTTLNDGYNAIQVGYGNVSTKS 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G     N+ P K L EFRV +  D   VG V +   F  GQL++VTG +IGKGF
Sbjct: 61  LTQPQLGHLQKSNIQPLKYLKEFRVNEPAD-FSVGQVLNVDSFIEGQLINVTGKSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KR+NF     THG S +HR+ GS G   DPGRV   KKMAG++G     +K L++V
Sbjct: 120 SGLQKRYNFSRGPMTHG-SKNHRAPGSIGMGTDPGRVLPGKKMAGQLGNKMTNIKKLKIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
            V++   +++VKG VPG   N   +V
Sbjct: 179 QVNNNENILVVKGAVPGKPGNLLSIV 204


>gi|15805340|ref|NP_294034.1| 50S ribosomal protein L3 [Deinococcus radiodurans R1]
 gi|42559707|sp|Q9RXK2|RL3_DEIRA RecName: Full=50S ribosomal protein L3
 gi|28948921|pdb|1NKW|B Chain B, Crystal Structure Of The Large Ribosomal Subunit From
           Deinococcus Radiodurans
 gi|29726789|pdb|1NWX|B Chain B, Complex Of The Large Ribosomal Subunit From Deinococcus
           Radiodurans With Abt-773
 gi|29726820|pdb|1NWY|B Chain B, Complex Of The Large Ribosomal Subunit From Deinococcus
           Radiodurans With Azithromycin
 gi|51247374|pdb|1SM1|B Chain B, Complex Of The Large Ribosomal Subunit From Deinococcus
           Radiodurans With Quinupristin And Dalfopristin
 gi|61680337|pdb|1XBP|B Chain B, Inhibition Of Peptide Bond Formation By Pleuromutilins:
           The Structure Of The 50s Ribosomal Subunit From
           Deinococcus Radiodurans In Complex With Tiamulin
 gi|146386617|pdb|2OGM|B Chain B, The Crystal Structure Of The Large Ribosomal Subunit From
           Deinococcus Radiodurans Complexed With The Pleuromutilin
           Derivative Sb-571519
 gi|146386619|pdb|2OGN|B Chain B, The Crystal Structure Of The Large Ribosomal Subunit From
           Deinococcus Radiodurans Complexed With The Pleuromutilin
           Derivative Sb-280080
 gi|146386621|pdb|2OGO|B Chain B, The Crystal Structure Of The Large Ribosomal Subunit From
           Deinococcus Radiodurans Complexed With The Pleuromutilin
           Derivative Retapamulin (Sb-275833)
 gi|190613491|pdb|2ZJP|B Chain B, Thiopeptide Antibiotic Nosiheptide Bound To The Large
           Ribosomal Subunit Of Deinococcus Radiodurans
 gi|190613521|pdb|2ZJQ|B Chain B, Interaction Of L7 With L11 Induced By Microccocin Binding
           To The Deinococcus Radiodurans 50s Subunit
 gi|190613552|pdb|2ZJR|B Chain B, Refined Native Structure Of The Large Ribosomal Subunit
           (50s) From Deinococcus Radiodurans
 gi|190613659|pdb|3CF5|B Chain B, Thiopeptide Antibiotic Thiostrepton Bound To The Large
           Ribosomal Subunit Of Deinococcus Radiodurans
 gi|203282458|pdb|3DLL|B Chain B, The Oxazolidinone Antibiotics Perturb The Ribosomal
           Peptidyl-Transferase Center And Effect Trna Positioning
 gi|323714542|pdb|3PIO|B Chain B, Crystal Structure Of The Synergistic Antibiotic Pair
           Lankamycin And Lankacidin In Complex With The Large
           Ribosomal Subunit
 gi|323714572|pdb|3PIP|B Chain B, Crystal Structure Of The Synergistic Antibiotic Pair
           Lankamycin And Lankacidin In Complex With The Large
           Ribosomal Subunit
 gi|6457985|gb|AAF09892.1|AE001892_3 ribosomal protein L3 [Deinococcus radiodurans R1]
          Length = 211

 Score =  159 bits (401), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 87/195 (44%), Positives = 115/195 (58%), Gaps = 6/195 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  K+GMT ++  + R IPVTV+    C +V  +T   +GY AVQ+G      + V+K
Sbjct: 3   GILGTKIGMTQIWKND-RAIPVTVVLAGPCPIVQRKTAQTDGYEAVQIGYAPKAERKVNK 61

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           PM+G F+   V+P + L EFR        P G   +   F  G+ +D TG + GKG  G 
Sbjct: 62  PMQGHFAKAGVAPTRILREFR-----GFAPDGDSVNVDIFAEGEKIDATGTSKGKGTQGV 116

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR NF G  A+HG    HR  GS G R+ PGRV+K K+MAG MG  RVTV+NLEVV + 
Sbjct: 117 MKRWNFAGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGHMGMERVTVQNLEVVEIR 176

Query: 184 DKRGLILVKGCVPGA 198
               LILVKG +PGA
Sbjct: 177 AGENLILVKGAIPGA 191


>gi|170757219|ref|YP_001783121.1| 50S ribosomal protein L3 [Clostridium botulinum B1 str. Okra]
 gi|226725153|sp|B1IGF4|RL3_CLOBK RecName: Full=50S ribosomal protein L3
 gi|169122431|gb|ACA46267.1| 50S ribosomal protein L3 [Clostridium botulinum B1 str. Okra]
          Length = 209

 Score =  159 bits (401), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +KLGMT ++N  G+ IPVTV+    C V+  +T++K+GY A+QV  G+ + K 
Sbjct: 1   MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP++G F+   VS K+ + EF+++ D + L +G       F  G+ VD++G++ GKGF
Sbjct: 61  RNKPVKGHFAKAGVSVKRHIKEFKLE-DSNSLEIGQEIKADVFEAGERVDISGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G ++R N      +HG S  HR+ GS G   DP R FKNK+M G MG    TV NLEVV
Sbjct: 120 QGTIRRWNAHRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  ++ LIL+KG VPG  K   + +R++ K+
Sbjct: 179 KIIPEKNLILIKGGVPGPNK-GLVQIRNTVKA 209


>gi|261415819|ref|YP_003249502.1| 50S ribosomal protein L3 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372275|gb|ACX75020.1| 50S ribosomal protein L3 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302326929|gb|ADL26130.1| ribosomal protein L3 [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 205

 Score =  159 bits (401), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 92/205 (44%), Positives = 126/205 (61%), Gaps = 3/205 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           +G++A+KLGMT V+  +G  +PVTVL    C VV H+T +K+GY AVQ+G G  K +  +
Sbjct: 2   NGILAKKLGMTQVFTEQGECVPVTVLEAGPCVVVCHKTEEKDGYTAVQIGFGLKKEQRAN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F   +V+ ++ L EF V  D +  PVG  F  + F   + V+V+G++ G GFSG
Sbjct: 62  KAEVGHFKKADVAVREHLAEFDVA-DLESWPVGKEFGAADFADAKTVNVSGISKGHGFSG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRH F     +HG   + R  G T     PGRVF  K+MAG+ G  +VTVK+L+VV V
Sbjct: 121 TIKRHGFHSGPRSHGTH-NMREPGGTSAHSYPGRVFPGKRMAGQYGNKKVTVKHLQVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
           D  R LI V+G VPG  KNS I+VR
Sbjct: 180 DGDRNLIFVRGAVPGP-KNSIIVVR 203


>gi|15674287|ref|NP_268460.1| 50S ribosomal protein L3 [Streptococcus pyogenes M1 GAS]
 gi|42559685|sp|Q9A1X4|RL3_STRP1 RecName: Full=50S ribosomal protein L3
 gi|13621367|gb|AAK33182.1| 50S ribosomal protein L3 [Streptococcus pyogenes M1 GAS]
          Length = 208

 Score =  159 bits (401), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/213 (44%), Positives = 133/213 (62%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  S   F  G +VDVTG++ GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFEAGDVVDVTGISKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK++AGRMGGNRVTV+NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +ILVKG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILVKGNVPGAKK-SLITIKSAVKAA 207


>gi|15594823|ref|NP_212612.1| 50S ribosomal protein L3 [Borrelia burgdorferi B31]
 gi|195941615|ref|ZP_03086997.1| 50S ribosomal protein L3 [Borrelia burgdorferi 80a]
 gi|216264833|ref|ZP_03436825.1| ribosomal protein L3 [Borrelia burgdorferi 156a]
 gi|218249534|ref|YP_002374988.1| ribosomal protein L3 [Borrelia burgdorferi ZS7]
 gi|221218185|ref|ZP_03589651.1| ribosomal protein L3 [Borrelia burgdorferi 72a]
 gi|223888933|ref|ZP_03623524.1| ribosomal protein L3 [Borrelia burgdorferi 64b]
 gi|224532529|ref|ZP_03673154.1| ribosomal protein L3 [Borrelia burgdorferi WI91-23]
 gi|224533652|ref|ZP_03674241.1| ribosomal protein L3 [Borrelia burgdorferi CA-11.2a]
 gi|225549667|ref|ZP_03770633.1| ribosomal protein L3 [Borrelia burgdorferi 118a]
 gi|226321788|ref|ZP_03797314.1| ribosomal protein L3 [Borrelia burgdorferi Bol26]
 gi|226725136|sp|B7J243|RL3_BORBZ RecName: Full=50S ribosomal protein L3
 gi|2688413|gb|AAC66864.1| ribosomal protein L3 (rplC) [Borrelia burgdorferi B31]
 gi|215981306|gb|EEC22113.1| ribosomal protein L3 [Borrelia burgdorferi 156a]
 gi|218164722|gb|ACK74783.1| ribosomal protein L3 [Borrelia burgdorferi ZS7]
 gi|221192133|gb|EEE18354.1| ribosomal protein L3 [Borrelia burgdorferi 72a]
 gi|223885749|gb|EEF56848.1| ribosomal protein L3 [Borrelia burgdorferi 64b]
 gi|224512601|gb|EEF82977.1| ribosomal protein L3 [Borrelia burgdorferi WI91-23]
 gi|224513325|gb|EEF83687.1| ribosomal protein L3 [Borrelia burgdorferi CA-11.2a]
 gi|225369944|gb|EEG99391.1| ribosomal protein L3 [Borrelia burgdorferi 118a]
 gi|226232977|gb|EEH31730.1| ribosomal protein L3 [Borrelia burgdorferi Bol26]
 gi|312148184|gb|ADQ30843.1| ribosomal protein L3 [Borrelia burgdorferi JD1]
          Length = 206

 Score =  159 bits (401), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 90/209 (43%), Positives = 130/209 (62%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++   G  +PVTV+      ++  +T+D++GY A+  G+ + K   VSK
Sbjct: 3   GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKVSK 62

Query: 64  PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G + S+ ++ PK+ + E    K  D    G       F   + VDVTG T GKGF G
Sbjct: 63  PIKGQYKSLKDIEPKRYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRMGGN+ T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D+++  +LVKG VPGA K S+++V+ S K
Sbjct: 179 DEEKRALLVKGAVPGA-KGSFVVVKKSKK 206


>gi|29653590|ref|NP_819282.1| LSU ribosomal protein L3P [Coxiella burnetii RSA 493]
 gi|161830671|ref|YP_001596185.1| 50S ribosomal protein L3 [Coxiella burnetii RSA 331]
 gi|212213250|ref|YP_002304186.1| 50S ribosomal protein L3 [Coxiella burnetii CbuG_Q212]
 gi|42559616|sp|Q83ES4|RL3_COXBU RecName: Full=50S ribosomal protein L3
 gi|189042841|sp|A9NAM4|RL3_COXBR RecName: Full=50S ribosomal protein L3
 gi|226725157|sp|B6J263|RL3_COXB2 RecName: Full=50S ribosomal protein L3
 gi|29540852|gb|AAO89796.1| LSU ribosomal protein L3P [Coxiella burnetii RSA 493]
 gi|161762538|gb|ABX78180.1| ribosomal protein L3 [Coxiella burnetii RSA 331]
 gi|212011660|gb|ACJ19041.1| LSU ribosomal protein L3P [Coxiella burnetii CbuG_Q212]
          Length = 217

 Score =  159 bits (401), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 88/212 (41%), Positives = 126/212 (59%), Gaps = 1/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK GMT ++   G  IPVTV+ +   ++   +T++ +GY A QV  G+     
Sbjct: 1   MSIGLIGRKCGMTRIFTETGSSIPVTVVEVILNRITQVKTVETDGYRAFQVAYGKKSSAR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G +S   V     L EFR+  ++      G       F  GQ+VDV G+T GKG
Sbjct: 61  VNKPLAGHYSKAAVEAGNALREFRLGNEELTEAKAGDELKVDIFKEGQVVDVRGLTRGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRHNF    ATHG S+SHR+ GS G  Q PGRV+K KKMAG++G    TV++ E+
Sbjct: 121 FAGTVKRHNFRTQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGQLGNVYCTVQSQEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           + VD +R L+L+KG +PGA     I+ + S K
Sbjct: 181 IKVDVERNLLLIKGALPGAPGGEVIITQSSKK 212


>gi|168187814|ref|ZP_02622449.1| ribosomal protein L3 [Clostridium botulinum C str. Eklund]
 gi|169294352|gb|EDS76485.1| ribosomal protein L3 [Clostridium botulinum C str. Eklund]
          Length = 209

 Score =  159 bits (401), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 86/212 (40%), Positives = 130/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ RK+GMT +++  G+ IPVTV+    C V+  ++ +K+GY A+QVG  + + K 
Sbjct: 1   MKKAIIGRKIGMTQIFDENGKVIPVTVVEAGPCAVLQKKSEEKDGYNAIQVGFEDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G F+   VS K+ + EFR++  D+   VG+      F  G  VDVTG++ GKGF
Sbjct: 61  ANKPKKGHFAKAGVSLKRIVKEFRLENIDE-YEVGTEIKADVFEAGDKVDVTGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF      HG S  HR+ GS G   DP R FKNKKM G MG  + TV N+EVV
Sbjct: 120 QGTIKRWNFHRGPMAHG-SKYHRAVGSMGAASDPSRTFKNKKMPGHMGNKKSTVLNIEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V   + ++L+KG +PG  K  +++++D+ K+
Sbjct: 179 KVMADKNVLLIKGGIPGPNK-GYVVIKDTVKA 209


>gi|148381421|ref|YP_001255962.1| ribosomal protein L3 [Clostridium botulinum A str. ATCC 3502]
 gi|153932935|ref|YP_001385796.1| 50S ribosomal protein L3 [Clostridium botulinum A str. ATCC 19397]
 gi|153937726|ref|YP_001389203.1| 50S ribosomal protein L3 [Clostridium botulinum A str. Hall]
 gi|166233132|sp|A7FZ69|RL3_CLOB1 RecName: Full=50S ribosomal protein L3
 gi|166233133|sp|A5I7K6|RL3_CLOBH RecName: Full=50S ribosomal protein L3
 gi|148290905|emb|CAL85041.1| 50S ribosomal protein L3 [Clostridium botulinum A str. ATCC 3502]
 gi|152928979|gb|ABS34479.1| 50S ribosomal protein L3 [Clostridium botulinum A str. ATCC 19397]
 gi|152933640|gb|ABS39139.1| 50S ribosomal protein L3 [Clostridium botulinum A str. Hall]
          Length = 209

 Score =  159 bits (401), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +KLGMT ++N  G+ IPVTV+    C V+  +T++K+GY A+QV  G+ + K 
Sbjct: 1   MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP++G F+   VS K+ + EF+++ D + L +G       F  G+ VD++G++ GKGF
Sbjct: 61  RNKPIKGHFAKAGVSVKRHIKEFKLE-DSNSLEIGQEIKADVFEAGERVDISGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G ++R N      +HG S  HR+ GS G   DP R FKNK+M G MG    TV NLEVV
Sbjct: 120 QGTIRRWNAHRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  ++ LIL+KG VPG  K   + +R++ K+
Sbjct: 179 RIIPEKNLILIKGGVPGPNK-GLVQIRNTVKA 209


>gi|258651363|ref|YP_003200519.1| 50S ribosomal protein L3 [Nakamurella multipartita DSM 44233]
 gi|258554588|gb|ACV77530.1| ribosomal protein L3 [Nakamurella multipartita DSM 44233]
          Length = 220

 Score =  159 bits (401), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 97/218 (44%), Positives = 124/218 (56%), Gaps = 7/218 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      V   RT + +GY AVQ   G    + V+K
Sbjct: 7   GILGHKLGMTQVFDEANRVVPVTVVAAGPVVVTAVRTPETDGYSAVQFAFGAVDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSG 122
           P  G F    V+P++ L E R   D     VG   + +  F  G +VDVTG + GKG +G
Sbjct: 67  PAAGQFVKAGVTPRRHLVELRTD-DVSGYSVGQELTAAEVFDAGAVVDVTGTSKGKGTAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F GL A HGV   HRS GS G    PGRVFK  +MAGRMG  +VTV+NL V +V
Sbjct: 126 VMKRHGFAGLGAGHGVQRKHRSPGSIGGCSTPGRVFKGLRMAGRMGNAKVTVQNLTVHAV 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
           D  RGL+L+ G VPG K    ++     KSAV  + KV
Sbjct: 186 DADRGLVLINGAVPGPKGGLVMI-----KSAVKNQSKV 218


>gi|152973956|ref|YP_001373473.1| 50S ribosomal protein L3 [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|189042831|sp|A7GK20|RL3_BACCN RecName: Full=50S ribosomal protein L3
 gi|152022708|gb|ABS20478.1| ribosomal protein L3 [Bacillus cytotoxicus NVH 391-98]
          Length = 210

 Score =  159 bits (401), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 92/213 (43%), Positives = 133/213 (62%), Gaps = 4/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGELIPVTVIEATPNVVLQKKTTETDGYNAIQLGFEDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  + +PK+ + E R   D D L VG       F  G+ VDVTG++ GKGF
Sbjct: 61  ANKPEQGHVAKASTAPKRFIREIR-DADVDGLEVGQEVKVEVFAAGETVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH       +HG S  HR  GS G    P RVFK KK+AGRMGG+++T++NLE+V
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQITIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            VD +R L+L+KG VPGAKK S ++V+ + K++
Sbjct: 178 QVDVERNLLLIKGNVPGAKK-SLVVVQGAVKAS 209


>gi|121608243|ref|YP_996050.1| 50S ribosomal protein L3 [Verminephrobacter eiseniae EF01-2]
 gi|166234606|sp|A1WHC5|RL3_VEREI RecName: Full=50S ribosomal protein L3
 gi|121552883|gb|ABM57032.1| LSU ribosomal protein L3P [Verminephrobacter eiseniae EF01-2]
          Length = 224

 Score =  159 bits (401), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 86/211 (40%), Positives = 127/211 (60%), Gaps = 3/211 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  +PVTV+ + + +V   +T + +GY+A+QV  G  K   VSK
Sbjct: 8   GLLGRKVGMMRLFTDDGDAVPVTVVDVSDNRVTQVKTQENDGYVALQVTFGARKASRVSK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           P  G  +   V   + + EFRV  D         SV   S F+VGQ VDV G +IGKG++
Sbjct: 68  PEAGHLAKAGVQAGEIIQEFRVSADTAAQYQAGASVAITSVFSVGQKVDVQGTSIGKGYA 127

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHN    RA+HG S SH   GS G  QDPGRVF  K+M G +G    T +NL+++ 
Sbjct: 128 GTIKRHNMRSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDATRTTQNLDLIR 187

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +D+ R L+L+KG +PG+ K  ++ VR + +S
Sbjct: 188 IDEARQLLLIKGAIPGS-KGGFVTVRPAVRS 217


>gi|291613236|ref|YP_003523393.1| 50S ribosomal protein L3 [Sideroxydans lithotrophicus ES-1]
 gi|291583348|gb|ADE11006.1| 50S ribosomal protein L3 [Sideroxydans lithotrophicus ES-1]
          Length = 214

 Score =  159 bits (401), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 92/213 (43%), Positives = 125/213 (58%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  +PVTVL + N +V   +T   +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKIGMTRIFTDDGTSLPVTVLDVSNNRVTQIKTAATDGYSAVQVAYGTRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V     L EF    +    L +G       F VGQ VDVTG+TIGKG
Sbjct: 61  VTKAAAGHFAKAGVEAGSVLKEFTATPEQLSSLTLGGKVGVDMFQVGQKVDVTGVTIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR++F   RATHG S SH   GS G  QDPGRVF  K+M G +G  + TV+NL++
Sbjct: 121 YAGTIKRYHFKSGRATHGNSKSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVQRTVQNLKI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V +D  R L+LV G VPGA     ++VR + K+
Sbjct: 181 VRIDADRQLLLVMGAVPGAPGGD-VIVRPAVKA 212


>gi|225016285|ref|ZP_03705477.1| hypothetical protein CLOSTMETH_00188 [Clostridium methylpentosum
           DSM 5476]
 gi|224950960|gb|EEG32169.1| hypothetical protein CLOSTMETH_00188 [Clostridium methylpentosum
           DSM 5476]
          Length = 211

 Score =  158 bits (400), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 84/213 (39%), Positives = 126/213 (59%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT +++  G+ IPVTV+    C VV  +T++ +GY AVQVG  + K   
Sbjct: 1   MKKAIIGKKVGMTQIFDENGKVIPVTVVEAGPCVVVQKKTVENDGYEAVQVGFSDLKPHK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP  G F+  + +PK+ L EFR++ D   L +G +     F  G +VDV G + GKGF
Sbjct: 61  VNKPTAGHFAKADAAPKRHLKEFRLE-DCASLNLGDLIKADVFAEGDIVDVCGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR+    L+A+HG     R  GS G   DP R+ K KKM G+MG   VT++NL VV
Sbjct: 120 AGTIKRYGNASLKASHGTGPVGRHAGSMGAASDPSRIPKGKKMPGQMGNETVTIQNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            VD +  LI ++G +PG      + + +S K A
Sbjct: 180 KVDAENNLIALRGAIPGP-NGGIVTIANSVKKA 211


>gi|258512670|ref|YP_003186104.1| 50S ribosomal protein L3 [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257479396|gb|ACV59715.1| 50S ribosomal protein L3 [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 211

 Score =  158 bits (400), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 91/209 (43%), Positives = 125/209 (59%), Gaps = 4/209 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT V+  +G  +PVTV+    C V+  R LDK+GY A+Q+G  + K    +K
Sbjct: 3   GILGRKLGMTQVFTEDGDVVPVTVIEAGPCVVLQKRVLDKDGYEAIQLGFADKKASRATK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G  +    +PK+ + E R    ++   VG       F  G +VDVTG++ GKGF+G 
Sbjct: 63  PEIGHAAKAGTAPKRYIREIRGVNVEE-YEVGQQLKADIFAPGDMVDVTGVSKGKGFAGP 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KRHN       HG S  HR  GS G    P R FK + MAGRMGG RVTV+NLEVV VD
Sbjct: 122 IKRHNQHRGPMAHG-SKYHRGVGSLGSIA-PNRTFKGQTMAGRMGGERVTVQNLEVVKVD 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            ++ +IL+KG VPG  +NS++ +R + K 
Sbjct: 180 PEKNVILIKGSVPGP-RNSFVTIRSAVKQ 207


>gi|168334352|ref|ZP_02692539.1| 50S ribosomal protein L3 [Epulopiscium sp. 'N.t. morphotype B']
          Length = 211

 Score =  158 bits (400), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 90/213 (42%), Positives = 123/213 (57%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A+K+GMT +++     IPVTVL    C VV  +T + +GY A+QVG    K K 
Sbjct: 1   MKKAIMAKKIGMTQIFDENANLIPVTVLEAGPCTVVQKKTKENDGYEAIQVGFINKKEKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V KP  G F    V PKK L EFR   D     VG       F  G  VDV G+T GKG+
Sbjct: 61  VIKPEAGHFEKAGVEPKKYLKEFRFD-DCSAFEVGGEIKAEVFVKGDKVDVAGVTKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           + ++K++ +      HG S  HR  GS G   +PGRV K K +  RMGG+ VT++NLE+V
Sbjct: 120 TSSIKKYGYSRGPMAHG-SKYHRHAGSMGAATNPGRVMKGKGLPSRMGGDNVTIQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            VD  + LIL+KGCVPG  K + + V++S K +
Sbjct: 179 RVDADKNLILIKGCVPGP-KGTVVTVKNSVKHS 210


>gi|153940129|ref|YP_001392834.1| 50S ribosomal protein L3 [Clostridium botulinum F str. Langeland]
 gi|168178832|ref|ZP_02613496.1| ribosomal protein L3 [Clostridium botulinum NCTC 2916]
 gi|170758623|ref|YP_001788821.1| 50S ribosomal protein L3 [Clostridium botulinum A3 str. Loch Maree]
 gi|166233134|sp|A7GJ74|RL3_CLOBL RecName: Full=50S ribosomal protein L3
 gi|226725154|sp|B1KSM5|RL3_CLOBM RecName: Full=50S ribosomal protein L3
 gi|152936025|gb|ABS41523.1| 50S ribosomal protein L3 [Clostridium botulinum F str. Langeland]
 gi|169405612|gb|ACA54023.1| 50S ribosomal protein L3 [Clostridium botulinum A3 str. Loch Maree]
 gi|182670248|gb|EDT82224.1| ribosomal protein L3 [Clostridium botulinum NCTC 2916]
 gi|295320814|gb|ADG01192.1| 50S ribosomal protein L3 [Clostridium botulinum F str. 230613]
          Length = 209

 Score =  158 bits (400), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +KLGMT ++N  G+ IPVTV+    C V+  +T++K+GY A+QV  G+ + K 
Sbjct: 1   MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP++G F+   VS K+ + EF+++ D + L +G       F  G+ VD++G++ GKGF
Sbjct: 61  RNKPVKGHFAKAGVSVKRHIKEFKLE-DSNSLEIGQEIKADVFEAGERVDISGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G ++R N      +HG S  HR+ GS G   DP R FKNK+M G MG    TV NLEVV
Sbjct: 120 QGTIRRWNAHRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  ++ LIL+KG VPG  K   + +R++ K+
Sbjct: 179 RIIPEKNLILIKGGVPGPNK-GLVQIRNTVKA 209


>gi|212550451|ref|YP_002308768.1| 50S ribosomal protein L3 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|226725128|sp|B6YQ85|RL3_AZOPC RecName: Full=50S ribosomal protein L3
 gi|212548689|dbj|BAG83357.1| 50S ribosomal protein L3 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 204

 Score =  158 bits (400), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 87/203 (42%), Positives = 126/203 (62%), Gaps = 4/203 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++++EG+ +P TV+ +  C V   +T+DK+GY AVQVG  + K K+ +K
Sbjct: 3   GLIGKKIGMTSIFSVEGKNLPCTVMEVGPCVVTQVKTVDKDGYEAVQVGFEDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P RG F    VS K+ L EF   K+      G V +  +F  G  VDV G++ GKGF G 
Sbjct: 63  PERGHFKRAGVSFKRYLAEF---KEQGKYKEGDVITVDFFNKGIYVDVVGISKGKGFQGV 119

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH F G+  AT G S   R  GS G    P +VFK  +MAG+MG  +VT++NLEV+ +
Sbjct: 120 VKRHGFRGVGEATLGQSDRQRHPGSIGACSYPAKVFKGTRMAGQMGNTKVTIQNLEVIEL 179

Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205
             K  L++VKG VPG+K +  I+
Sbjct: 180 ISKYNLLIVKGSVPGSKGSILIV 202


>gi|194334861|ref|YP_002016721.1| 50S ribosomal protein L3 [Prosthecochloris aestuarii DSM 271]
 gi|226730548|sp|B4S5M7|RL3_PROA2 RecName: Full=50S ribosomal protein L3
 gi|194312679|gb|ACF47074.1| ribosomal protein L3 [Prosthecochloris aestuarii DSM 271]
          Length = 209

 Score =  158 bits (400), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 86/204 (42%), Positives = 120/204 (58%), Gaps = 1/204 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           + ++ +K+GMT +YN +   +P TV+    C V   +T D +GY A Q+  GE K   VS
Sbjct: 2   AAILGKKIGMTRIYNEKREAVPCTVIQAAPCFVSQVKTSDNDGYEAYQLSIGERKEAKVS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KPMRG ++   ++P  K+ EF     D  L +GS  S   F  G  VDV G+T GKGF+G
Sbjct: 62  KPMRGHYAKAGITPGYKIAEFGKDLMDADLELGSSVSVDMFKEGDKVDVRGVTKGKGFAG 121

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHNF G   THG S   R+ GS G   DP R FK  +MAGRMG   V V+ L++V +
Sbjct: 122 VVKRHNFAGGSRTHGQSDRLRAPGSVGGSSDPSRTFKGMRMAGRMGSKNVKVRGLQIVKI 181

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
             +  L+++KG VPG  KNS++ +
Sbjct: 182 IPESNLLVIKGSVPGV-KNSYVEI 204


>gi|222099967|ref|YP_002534535.1| 50S ribosomal protein L3 [Thermotoga neapolitana DSM 4359]
 gi|221572357|gb|ACM23169.1| 50S ribosomal protein L3 [Thermotoga neapolitana DSM 4359]
          Length = 210

 Score =  158 bits (400), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 93/205 (45%), Positives = 124/205 (60%), Gaps = 6/205 (2%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RK+GMT V+ I    +PVTV+    C VV  +T++ +GY AVQ+G    K K V+KP
Sbjct: 7   IIGRKIGMTRVF-IGNEAVPVTVIKAGPCVVVQKKTVETDGYNAVQLGF--EKAKKVNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + G F    V P + L EFRV   D+  P G V     F  G+ VDVTG + G+GF+GAM
Sbjct: 64  LAGHFKKFGVEPMRVLREFRVDNPDEYEP-GQVIKVDIFEKGEYVDVTGWSKGRGFAGAM 122

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR  F G   +HG S  HR  GS G   +P +++K KKM GR G  RVTV+NL+VV VD 
Sbjct: 123 KRWGFSGGPKSHG-SKFHRELGSVGQHTEPAKIWKGKKMPGRYGNERVTVRNLQVVDVDP 181

Query: 185 KRGLILVKGCVPGAKKNSWILVRDS 209
           +  LI VKG VPGA +   +L+R +
Sbjct: 182 ENDLIAVKGGVPGA-RGGLVLIRSA 205


>gi|163938118|ref|YP_001643002.1| 50S ribosomal protein L3 [Bacillus weihenstephanensis KBAB4]
 gi|218895245|ref|YP_002443656.1| ribosomal protein L3 [Bacillus cereus G9842]
 gi|228970299|ref|ZP_04130958.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|229053956|ref|ZP_04195390.1| 50S ribosomal protein L3 [Bacillus cereus AH603]
 gi|229131118|ref|ZP_04260030.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST196]
 gi|226725130|sp|B7IT19|RL3_BACC2 RecName: Full=50S ribosomal protein L3
 gi|226725133|sp|A9VP77|RL3_BACWK RecName: Full=50S ribosomal protein L3
 gi|163860315|gb|ABY41374.1| ribosomal protein L3 [Bacillus weihenstephanensis KBAB4]
 gi|218544022|gb|ACK96416.1| ribosomal protein L3 [Bacillus cereus G9842]
 gi|228652331|gb|EEL08256.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST196]
 gi|228721374|gb|EEL72895.1| 50S ribosomal protein L3 [Bacillus cereus AH603]
 gi|228789408|gb|EEM37328.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|326937905|gb|AEA13801.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 210

 Score =  158 bits (400), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 93/211 (44%), Positives = 132/211 (62%), Gaps = 4/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+  +   V+  +T + +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGELIPVTVIAANPNVVLQKKTTETDGYNAIQLGFEDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  + +PK+ + E R   D D L VG       F  G++VDVTG++ GKGF
Sbjct: 61  TNKPEQGHTAKASTTPKRFIREIR-DADVDGLEVGQEVKVEVFAAGEIVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       +HG S  HR  GS G    P RVFK KK+AGRMGG++VT++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L+LVKG VPGAKK S ++V+ + K
Sbjct: 178 QVDTERNLLLVKGNVPGAKK-SLVVVQGAVK 207


>gi|126697640|ref|YP_001086537.1| 50S ribosomal protein L3 [Clostridium difficile 630]
 gi|254973731|ref|ZP_05270203.1| 50S ribosomal protein L3 [Clostridium difficile QCD-66c26]
 gi|255091120|ref|ZP_05320598.1| 50S ribosomal protein L3 [Clostridium difficile CIP 107932]
 gi|255099232|ref|ZP_05328209.1| 50S ribosomal protein L3 [Clostridium difficile QCD-63q42]
 gi|255305015|ref|ZP_05349187.1| 50S ribosomal protein L3 [Clostridium difficile ATCC 43255]
 gi|255312775|ref|ZP_05354358.1| 50S ribosomal protein L3 [Clostridium difficile QCD-76w55]
 gi|255515534|ref|ZP_05383210.1| 50S ribosomal protein L3 [Clostridium difficile QCD-97b34]
 gi|255648629|ref|ZP_05395531.1| 50S ribosomal protein L3 [Clostridium difficile QCD-37x79]
 gi|255654162|ref|ZP_05399571.1| 50S ribosomal protein L3 [Clostridium difficile QCD-23m63]
 gi|260681846|ref|YP_003213131.1| 50S ribosomal protein L3 [Clostridium difficile CD196]
 gi|260685444|ref|YP_003216577.1| 50S ribosomal protein L3 [Clostridium difficile R20291]
 gi|296449799|ref|ZP_06891568.1| 50S ribosomal protein L3 [Clostridium difficile NAP08]
 gi|296877863|ref|ZP_06901885.1| 50S ribosomal protein L3 [Clostridium difficile NAP07]
 gi|306518752|ref|ZP_07405099.1| 50S ribosomal protein L3 [Clostridium difficile QCD-32g58]
 gi|123174670|sp|Q18CG0|RL3_CLOD6 RecName: Full=50S ribosomal protein L3
 gi|115249077|emb|CAJ66888.1| 50S ribosomal protein L3 [Clostridium difficile]
 gi|260208009|emb|CBA60186.1| 50S ribosomal protein L3 [Clostridium difficile CD196]
 gi|260211460|emb|CBE01579.1| 50S ribosomal protein L3 [Clostridium difficile R20291]
 gi|296261397|gb|EFH08223.1| 50S ribosomal protein L3 [Clostridium difficile NAP08]
 gi|296431163|gb|EFH16988.1| 50S ribosomal protein L3 [Clostridium difficile NAP07]
          Length = 209

 Score =  158 bits (400), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 94/208 (45%), Positives = 128/208 (61%), Gaps = 4/208 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++  +G  IPVT +      V   +T+DK+GY A+Q+G  +AK K ++K
Sbjct: 3   GILGKKVGMTQIFTDKGVVIPVTAVEAGPMVVTQIKTVDKDGYNAIQIGFEDAKEKALNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G  ++ NV  KK L EFRV   +    VG       F  G  +DVTG++ GKGF G 
Sbjct: 63  PKKGHLAAANVL-KKHLKEFRVDSVEGYT-VGQEIKADVFEAGAKIDVTGISKGKGFQGP 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KRH       THG S  HR  GS G    PGRVFKNKK+AG MG  +VTV+NLEVV VD
Sbjct: 121 IKRHGQSRGPETHG-SRYHRRPGSMGACSYPGRVFKNKKLAGHMGSVKVTVQNLEVVKVD 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
             + LILVKG +PGA K S + ++++ K
Sbjct: 180 ADKNLILVKGAIPGA-KGSVVTIKEAIK 206


>gi|38233085|ref|NP_938852.1| 50S ribosomal protein L3 [Corynebacterium diphtheriae NCTC 13129]
 gi|42559574|sp|P60453|RL3_CORDI RecName: Full=50S ribosomal protein L3
 gi|38199344|emb|CAE48977.1| 50S ribosomal protein L3 [Corynebacterium diphtheriae]
          Length = 218

 Score =  158 bits (400), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 84/198 (42%), Positives = 117/198 (59%), Gaps = 5/198 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT +++ + R IPVTV+    C V   RT++ +GY A+Q+  GE   +  +K
Sbjct: 8   GILGTKLGMTQIFDEDNRVIPVTVVEAGPCVVTQIRTVETDGYNAIQIAYGEIDPRKANK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           P  G F    V+P++ + E R+   DD+    +G   +   F     VDVTG T GKG++
Sbjct: 68  PAAGHFKKAGVTPRRHVAEIRM---DDVSGYELGQDVTVEIFEGINFVDVTGTTKGKGYA 124

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           GAMKRH F G  A HG   +HR  G  G    PGRVFK  +MAGRMG +RVT +NL+V  
Sbjct: 125 GAMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGSDRVTTQNLKVQK 184

Query: 182 VDDKRGLILVKGCVPGAK 199
           +D    LIL+KG +PG +
Sbjct: 185 IDADANLILIKGAIPGVR 202


>gi|302543361|ref|ZP_07295703.1| 50S ribosomal protein L3 [Streptomyces hygroscopicus ATCC 53653]
 gi|302460979|gb|EFL24072.1| 50S ribosomal protein L3 [Streptomyces himastatinicus ATCC 53653]
          Length = 214

 Score =  158 bits (400), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/210 (46%), Positives = 127/210 (60%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+  KLGMT V++   R +PVTV+    C V   RT D +GY AVQ+  GE   + V+K
Sbjct: 7   GVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTDDADGYDAVQIAFGEIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKG +G 
Sbjct: 67  PLKGHFAKADVTPRRHLVELRTA-DASEYTLGQEVTAEAFESGVKVDVTGTSKGKGTAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH FGGL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +VD
Sbjct: 126 MKRHGFGGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++GL+L+KG VPG      +LVR + K A
Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214


>gi|67923583|ref|ZP_00517055.1| Ribosomal protein L3 [Crocosphaera watsonii WH 8501]
 gi|67854553|gb|EAM49840.1| Ribosomal protein L3 [Crocosphaera watsonii WH 8501]
          Length = 213

 Score =  158 bits (400), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 88/198 (44%), Positives = 118/198 (59%), Gaps = 3/198 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT ++  E G  IPVTV+    C +   +T + +GY AVQ+G  E K K
Sbjct: 1   MSVGLLGTKLGMTQIFEEESGLAIPVTVVQAGPCTITQIKTTETDGYSAVQLGYLEVKEK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++KP  G    VN SP + L E+RV+ D     +G       F+ G LVDV+G ++G+G
Sbjct: 61  ALTKPELGHLKKVNASPLRHLKEYRVE-DTASYQLGEAVKADIFSTGDLVDVSGTSMGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G  KRHNF     THG S +HR  GSTG    PGRV+  KKMAG+ G  + T + L V
Sbjct: 120 FAGYQKRHNFKRGNMTHG-SKNHRLPGSTGAGTTPGRVYPGKKMAGQYGAAKTTTRKLTV 178

Query: 180 VSVDDKRGLILVKGCVPG 197
           V VD +R L+L+KG VPG
Sbjct: 179 VRVDTERNLLLIKGAVPG 196


>gi|322807806|emb|CBZ05381.1| LSU ribosomal protein L3p (L3e) [Clostridium botulinum H04402 065]
          Length = 209

 Score =  158 bits (400), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +KLGMT ++N  G+ IPVTV+    C V+  +T++K+GY A+QV  G+ + K 
Sbjct: 1   MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP++G F+   VS K+ + EF+++ D + L +G       F  G+ VD++G++ GKGF
Sbjct: 61  RNKPVKGHFAKAGVSVKRHIKEFKLE-DSNSLKIGQEIKADIFEAGERVDISGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G ++R N      +HG S  HR+ GS G   DP R FKNK+M G MG    TV NLEVV
Sbjct: 120 QGTIRRWNAHRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  ++ LIL+KG VPG  K   + +R++ K+
Sbjct: 179 RIIPEKNLILIKGGVPGPNK-GLVQIRNTVKA 209


>gi|331268413|ref|YP_004394905.1| 50S ribosomal protein L3 [Clostridium botulinum BKT015925]
 gi|329124963|gb|AEB74908.1| ribosomal protein L3 [Clostridium botulinum BKT015925]
          Length = 209

 Score =  158 bits (400), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 87/212 (41%), Positives = 130/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ RK+GMT +++  G+ IPVTV+    C V+  +T +K+GY A+QVG  + + K 
Sbjct: 1   MKKAIIGRKIGMTQIFDENGKVIPVTVVEAGPCAVLQKKTEEKDGYNAIQVGFEDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G F+   VS K+ + EFR++  D+   VG+      F  G  VDVTG++ GKGF
Sbjct: 61  ANKPKKGHFAKAGVSLKRIVREFRLENIDE-YEVGNEIKADVFEAGDKVDVTGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF      HG S  HR+ GS G   DP R FKNKKM G MG  + TV NLEVV
Sbjct: 120 QGTIKRWNFHRGPMAHG-SKYHRAVGSMGAASDPSRTFKNKKMPGHMGHKKSTVLNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V   + ++L+KG +PG  K  +++++++ K+
Sbjct: 179 KVMADKNVVLIKGGIPGPNK-GYVVIKNTVKA 209


>gi|193211851|ref|YP_001997804.1| 50S ribosomal protein L3 [Chlorobaculum parvum NCIB 8327]
 gi|226725146|sp|B3QR75|RL3_CHLP8 RecName: Full=50S ribosomal protein L3
 gi|193085328|gb|ACF10604.1| ribosomal protein L3 [Chlorobaculum parvum NCIB 8327]
          Length = 209

 Score =  158 bits (400), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 88/207 (42%), Positives = 122/207 (58%), Gaps = 1/207 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT +YN +   +P TV+    C V   ++ +K+GY A Q+G GE   K V+KP
Sbjct: 4   ILGKKIGMTRLYNNKREAVPCTVIQAGPCFVAQVKSTEKDGYDAYQLGFGERDEKKVTKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + G +     +P   L E         L  G+  +   FT G++VDV G+T GKGF+G +
Sbjct: 64  LAGHYKKAGKTPGYLLSEVSKSLIAGELEAGATVAVDVFTEGEIVDVLGVTKGKGFAGVV 123

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHNFGG   THG S   R+ GS G   DP R FK  +MAGRMGG   TV+NLE+V V  
Sbjct: 124 KRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFKGTRMAGRMGGENKTVRNLEIVKVMP 183

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
           +  LI+VKG VPG  KNS++ +  + K
Sbjct: 184 ESNLIVVKGAVPGP-KNSYVKIVSTTK 209


>gi|222056705|ref|YP_002539067.1| ribosomal protein L3 [Geobacter sp. FRC-32]
 gi|254803674|sp|B9M6U5|RL3_GEOSF RecName: Full=50S ribosomal protein L3
 gi|221565994|gb|ACM21966.1| ribosomal protein L3 [Geobacter sp. FRC-32]
          Length = 211

 Score =  158 bits (400), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++  +GRRIPVTV+    C V+  +T +K+GY A+QVG    +   
Sbjct: 1   MNKGLIGKKIGMTQIFADDGRRIPVTVVEAGPCVVIQKKTKEKDGYNAIQVGFDAKEAAK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +    G   +          E RV  + D   VG V +   F  G ++DVTG +IGKGF
Sbjct: 61  ANSATVGHCKAAGSGAFSFFRELRVD-NVDSYNVGDVLNADLFAAGDVIDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR  F G R++HG S  HR+ GS GC   P RVFKNKKM G++G  RVTV+ L+VV
Sbjct: 120 QGVIKRWGFKGGRSSHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQLGNERVTVQRLKVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD    LILV G +PG+  N  + ++DS K+
Sbjct: 179 RVDAADNLILVGGAIPGS-TNGLVFIKDSVKA 209


>gi|160872579|ref|ZP_02062711.1| ribosomal protein L3 [Rickettsiella grylli]
 gi|159121378|gb|EDP46716.1| ribosomal protein L3 [Rickettsiella grylli]
          Length = 223

 Score =  158 bits (400), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 85/203 (41%), Positives = 123/203 (60%), Gaps = 5/203 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK GMT +Y   G  IPVT++ +   +VV  +T +++GY ++QV  G+     
Sbjct: 1   MTMGLIGRKCGMTQLYAENGTVIPVTLIEIQPNRVVQIKTKERDGYESIQVTTGKKLSSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG-----SVFSPSYFTVGQLVDVTGMT 115
           ++K   G F+   V P   L+E R+ ++D     G      +     F +G  VDVTG  
Sbjct: 61  LNKAEAGHFAKAAVEPGINLWELRITEEDHEFLKGISLGMEMTIDKLFKLGTYVDVTGTN 120

Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
            GKGF+G +KR++F    ATHG S+SHR+ GS G RQ PGRVFK KKM G++G  R TV+
Sbjct: 121 KGKGFAGVVKRYHFSTQDATHGNSLSHRAPGSIGQRQSPGRVFKGKKMCGQLGNRRCTVQ 180

Query: 176 NLEVVSVDDKRGLILVKGCVPGA 198
           +LE+V +D +R L+ +KG VPGA
Sbjct: 181 SLEIVRIDTERHLLHIKGAVPGA 203


>gi|304438907|ref|ZP_07398830.1| 50S ribosomal protein L3 [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304372573|gb|EFM26156.1| 50S ribosomal protein L3 [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 210

 Score =  158 bits (400), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT +++  G   PVTV+      VV  ++++ +GY AVQV +G+ K+  V+KP
Sbjct: 4   LIGKKVGMTQLFDENGTVTPVTVIQAMPNVVVQKKSVETDGYNAVQVASGDVKLNRVNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
            +G F   NV PKK L EF+   D D   +G   + + F+ G  VDV G + GKG  G +
Sbjct: 64  TKGHFEKANVEPKKYLNEFKTD-DLDSYEIGKELNVTIFSEGDFVDVVGTSKGKGTQGVV 122

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
            RH FG  R THG S  HR  G  G    PG+V+KN +MAG+ G  RVTV+NL VV VD+
Sbjct: 123 TRHGFGRGRETHG-SKFHRMPGGMGAATYPGKVWKNHRMAGKTGNERVTVQNLLVVRVDE 181

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           +R LI VKG +PG K+   + V+++ K  
Sbjct: 182 ERNLIFVKGSIPGPKRGK-VTVKETVKQG 209


>gi|229825321|ref|ZP_04451390.1| hypothetical protein GCWU000182_00675 [Abiotrophia defectiva ATCC
           49176]
 gi|229790693|gb|EEP26807.1| hypothetical protein GCWU000182_00675 [Abiotrophia defectiva ATCC
           49176]
          Length = 211

 Score =  158 bits (399), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 92/205 (44%), Positives = 121/205 (59%), Gaps = 2/205 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++  +G  IPVTVL  D   V   +T++ +GY AVQVG G+ +   
Sbjct: 1   MKKAILATKIGMTQIFAEDGSLIPVTVLKADPAVVTQVKTVENDGYSAVQVGFGDIRENL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G F+   V  K+ L EF+++ D +    G       F  G  VD T  + GKGF
Sbjct: 61  VNKPKKGHFAKAGVPVKRFLREFKLE-DAENYKAGDEIKSDVFAAGDKVDATATSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+ RH        HG S  HR  GS G   DP +VFK KKMAG MG  +VTV+NLEVV
Sbjct: 120 QGAIHRHGLHRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKKMAGHMGHVKVTVQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWIL 205
            VD ++ LILVKG VPGAKK   +L
Sbjct: 179 RVDAEKNLILVKGAVPGAKKALVML 203


>gi|85858146|ref|YP_460348.1| 50S ribosomal protein L3P [Syntrophus aciditrophicus SB]
 gi|109893562|sp|Q2LQA1|RL3_SYNAS RecName: Full=50S ribosomal protein L3
 gi|85721237|gb|ABC76180.1| LSU ribosomal protein L3P [Syntrophus aciditrophicus SB]
          Length = 218

 Score =  158 bits (399), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 132/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ RK+GMT V+  +G  IPVT + ++   +   +T++K+GY A+Q+G G  K   
Sbjct: 10  MKKMIIGRKIGMTQVFAEDGAAIPVTAIEVEPSVITQKKTVEKDGYDAIQLGYGRIKQNK 69

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP++G F+  +    + L E R  +  +   +G   +   F  G++VD+TG T GKGF
Sbjct: 70  ATKPLQGHFAKADKGCFRILKEMRCDQIQEY-ELGQEITLDIFESGEMVDITGTTKGKGF 128

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH F G R++HG S+ HR+ GS G    P RVFK KK+ G+MG  + TVKNL + 
Sbjct: 129 AGVIKRHGFRGGRSSHG-SMFHRAPGSIGASAYPSRVFKGKKLPGQMGNKQKTVKNLMIW 187

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           S+  +R LIL++G VPGA +N ++ ++ S K+
Sbjct: 188 SLRPERNLILIRGAVPGA-RNGYLFIKQSAKA 218


>gi|289423692|ref|ZP_06425491.1| 50S ribosomal protein L3 [Peptostreptococcus anaerobius 653-L]
 gi|289155942|gb|EFD04608.1| 50S ribosomal protein L3 [Peptostreptococcus anaerobius 653-L]
          Length = 209

 Score =  158 bits (399), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 92/210 (43%), Positives = 129/210 (61%), Gaps = 4/210 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V+  EG  IPVTV+      V   +TL+ +GY A+QVG  +AK K ++K
Sbjct: 3   GILGKKIGMTQVFTEEGLVIPVTVVEAGPVAVTQIKTLENDGYEAIQVGYVDAKEKALNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G  +   V  K+ L EFRV   +    VG       FT G+ +DVTG++ GKGF G 
Sbjct: 63  PQKGHLAKAGVL-KRHLKEFRVDTVEGY-EVGQEIKADLFTAGEKIDVTGISKGKGFQGP 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KRH       +HG S  HR  GS G    PGRVFKNKK+AG MG  ++T++NLEVV VD
Sbjct: 121 IKRHGQSRGPESHG-SRYHRRPGSMGACSYPGRVFKNKKLAGHMGSVKITIQNLEVVRVD 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++ L+L+KG +PGA K S + V+ + K +
Sbjct: 180 AEKNLLLIKGAIPGA-KGSVVTVKAAIKGS 208


>gi|260589279|ref|ZP_05855192.1| 50S ribosomal protein L3 [Blautia hansenii DSM 20583]
 gi|331082685|ref|ZP_08331808.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 6_1_63FAA]
 gi|260540360|gb|EEX20929.1| 50S ribosomal protein L3 [Blautia hansenii DSM 20583]
 gi|330400304|gb|EGG79946.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 209

 Score =  158 bits (399), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 92/211 (43%), Positives = 125/211 (59%), Gaps = 5/211 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G   PVTVL    C V   +T+D +GY AVQVG G+ +   
Sbjct: 1   MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTMDNDGYEAVQVGFGDKRENI 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+G F    VS K+ + E +++ +  L   G       F  G  +DVT  + GKGF
Sbjct: 61  VNKPMKGHFEKAGVSCKRFVRELKLEGEYTL---GQEIKADIFAAGDKIDVTATSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G   DP +VFK K+M G MG  RVTV+NLEVV
Sbjct: 118 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKRMPGHMGHVRVTVQNLEVV 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +  L+LVKG VPG KK S + ++++ K
Sbjct: 177 RVDAENNLLLVKGAVPGPKK-SLVTIKETVK 206


>gi|19745241|ref|NP_606377.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS8232]
 gi|21909576|ref|NP_663844.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS315]
 gi|28894954|ref|NP_801304.1| 50S ribosomal protein L3 [Streptococcus pyogenes SSI-1]
 gi|71909858|ref|YP_281408.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS5005]
 gi|139472927|ref|YP_001127642.1| 50S ribosomal protein L3 [Streptococcus pyogenes str. Manfredo]
 gi|251781515|ref|YP_002995816.1| 50S ribosomal protein L3 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|306828260|ref|ZP_07461520.1| 50S ribosomal protein L3 [Streptococcus pyogenes ATCC 10782]
 gi|42559572|sp|P60451|RL3_STRP3 RecName: Full=50S ribosomal protein L3
 gi|42559573|sp|P60452|RL3_STRP8 RecName: Full=50S ribosomal protein L3
 gi|166234599|sp|A2RC14|RL3_STRPG RecName: Full=50S ribosomal protein L3
 gi|19747335|gb|AAL96876.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS8232]
 gi|21903757|gb|AAM78647.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS315]
 gi|28810199|dbj|BAC63137.1| 50S ribosomal protein L3 [Streptococcus pyogenes SSI-1]
 gi|71852640|gb|AAZ50663.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS5005]
 gi|134271173|emb|CAM29386.1| 50S ribosomal protein L3 [Streptococcus pyogenes str. Manfredo]
 gi|242390143|dbj|BAH80602.1| 50S ribosomal protein L3 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|304429571|gb|EFM32620.1| 50S ribosomal protein L3 [Streptococcus pyogenes ATCC 10782]
 gi|323126311|gb|ADX23608.1| 50S ribosomal protein L3 [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 208

 Score =  158 bits (399), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 95/213 (44%), Positives = 132/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  S   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK++AGRMGGNRVTV+NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +ILVKG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILVKGNVPGAKK-SLITIKSAVKAA 207


>gi|323344636|ref|ZP_08084860.1| 50S ribosomal protein L3 [Prevotella oralis ATCC 33269]
 gi|323093906|gb|EFZ36483.1| 50S ribosomal protein L3 [Prevotella oralis ATCC 33269]
          Length = 204

 Score =  158 bits (399), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 83/205 (40%), Positives = 125/205 (60%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V++ +G+  P TV+ +  C V   +T++K+GY AVQ+G GEAK K  + 
Sbjct: 3   GLIGRKIGMTSVFSADGKNTPCTVIEIGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTTM 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           PM G F     +PKK L EF+  ++ +L   G   +   F   + VDV G + GKGF G 
Sbjct: 63  PMMGIFKKAGTTPKKHLAEFKFDEEYNL---GDTLTVELFEGTEFVDVIGTSKGKGFQGV 119

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ ++THG     R  GS G    P +VFK  +MAG+MGG+RVT +NL V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLRVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             ++ L++VKG   G   ++ ++ +
Sbjct: 180 IPEQNLLIVKGSFAGCNGSTVLIEK 204


>gi|225574700|ref|ZP_03783310.1| hypothetical protein RUMHYD_02777 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038090|gb|EEG48336.1| hypothetical protein RUMHYD_02777 [Blautia hydrogenotrophica DSM
           10507]
          Length = 224

 Score =  158 bits (399), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 88/212 (41%), Positives = 126/212 (59%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G  IPVTVL    C V   +T + +GY AVQVG  + +   
Sbjct: 15  MKKAILATKVGMTQIFNEDGVLIPVTVLQAGPCVVTQVKTEENDGYSAVQVGYADKRENL 74

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+G F    VS K+ + EF++    +   +G       F  G  +D T ++ GKG+
Sbjct: 75  VNKPMKGHFEKAGVSCKRFVKEFKLDNAAEY-ELGQEIKVDVFEAGDHIDATAISKGKGY 133

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G   DP +VFK KKM G+MG  ++T++NLEVV
Sbjct: 134 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGAASDPSKVFKGKKMPGQMGNKQITIQNLEVV 192

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  L+LVKG VPG KK S + ++++ KS
Sbjct: 193 RVDAENNLLLVKGAVPGPKK-SLVTIKETVKS 223


>gi|307069692|ref|YP_003878169.1| 50S ribosomal subunit protein L3 [Candidatus Zinderia insecticola
           CARI]
 gi|306482952|gb|ADM89823.1| 50S ribosomal subunit protein L3 [Candidatus Zinderia insecticola
           CARI]
          Length = 202

 Score =  158 bits (399), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 80/198 (40%), Positives = 120/198 (60%), Gaps = 2/198 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK-NVSK 63
           ++ +K+GM+C+YN  G  IPVT++ + N  V   + + K+ Y ++Q+  G+ K+  N+ K
Sbjct: 1   MIGKKIGMSCLYNKNGSMIPVTIIDVSNNFVTQIKNIKKDKYFSIQISYGKNKISSNMKK 60

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F          + EF+  K      +G     + F + Q V + G +IGKGFSG 
Sbjct: 61  PLIGHFYKSKTKYNYIIKEFK-NKRYSKFNLGERIKINIFNLNQKVSIKGKSIGKGFSGT 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KRHNF   RA+HG S SH+S GS G  QDPGRVFK KKM G++G    T++NLE++ +D
Sbjct: 120 IKRHNFSSGRASHGNSRSHKSPGSVGMCQDPGRVFKGKKMCGQLGNKNCTIRNLEILKID 179

Query: 184 DKRGLILVKGCVPGAKKN 201
           +K  L+ +KG +PG K N
Sbjct: 180 NKNNLLWIKGSIPGFKNN 197


>gi|206890251|ref|YP_002249245.1| ribosomal protein L3 [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206742189|gb|ACI21246.1| ribosomal protein L3 [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 205

 Score =  158 bits (399), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 89/196 (45%), Positives = 122/196 (62%), Gaps = 6/196 (3%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVKNVSK 63
           ++ +K+GMT +++ EGR IPVTV+    C +V  R+ +KNGY AVQ+G  E  K KNV K
Sbjct: 4   ILGKKIGMTQIFDEEGRIIPVTVIEAGPCWIVQVRSKEKNGYEAVQLGFQEIKKEKNVPK 63

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    + P + L EF++   +    VG   +   FT G +V + G++ GKG+ G 
Sbjct: 64  PLLGIFKKAGIPPCRVLKEFKMTGFN----VGDKVTVEIFTKGDVVSIAGISKGKGYQGV 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF G   THG S+ +R+ GS G    P RV+K K MAG MG  RVTVKNL +V V 
Sbjct: 120 MKRHNFAGGPDTHG-SMFNRAPGSIGASSFPSRVWKGKGMAGHMGNERVTVKNLTIVDVI 178

Query: 184 DKRGLILVKGCVPGAK 199
            ++ L+LVKG VPG +
Sbjct: 179 PEQNLLLVKGAVPGGE 194


>gi|291286312|ref|YP_003503128.1| 50S ribosomal protein L3 [Denitrovibrio acetiphilus DSM 12809]
 gi|290883472|gb|ADD67172.1| 50S ribosomal protein L3 [Denitrovibrio acetiphilus DSM 12809]
          Length = 211

 Score =  158 bits (399), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 93/213 (43%), Positives = 128/213 (60%), Gaps = 5/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVK 59
           M   ++ +K+GMT V+N +G  +PVTV+    C V   RT +K+GY A+Q+G  E  K  
Sbjct: 1   MAKAIIGKKVGMTQVFNEDGTVVPVTVVLAGPCVVTEVRTEEKDGYSAIQLGFDEIVKET 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            V+KPM G+F    V P K L EFR +  +  + VG     + F  G LVDV G +IGKG
Sbjct: 61  RVNKPMAGYFKKQGVKPMKFLKEFRGEAGE--ITVGQQVDVNVFEEGDLVDVQGTSIGKG 118

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKRH F G   THG S  HR+ GS G  + PG   K +KM GRMGG +VTV+NL V
Sbjct: 119 FQGVMKRHGFAGGPKTHG-SHFHRAPGSIGMCEFPGETPKGRKMPGRMGGKKVTVQNLSV 177

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V V  +  L+LVKG +PG   ++ + ++++ K+
Sbjct: 178 VKVIPETNLLLVKGAIPG-HDDAIVYIKEAVKA 209


>gi|332042720|gb|EGI78920.1| 50S ribosomal protein L3 [Lacinutrix algicola 5H-3-7-4]
          Length = 205

 Score =  158 bits (399), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 86/206 (41%), Positives = 128/206 (62%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C V   RT + +GY AVQ+G  +A  K+ +
Sbjct: 2   SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCIVTQVRTEEVDGYKAVQLGFDDATEKSAT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G       S K+K+ EF  Q  ++   +G   +  +F  G+ VDV+G + GKGF G
Sbjct: 62  KADLGHAKKAGTSVKRKIAEF--QGFEEEYKLGDAITVEHFAEGEFVDVSGTSKGKGFQG 119

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG+ +ATHG     R+ GS G    P RVFK  KMAGRMGG+ + V+NL V+ 
Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGRMGGDTIKVQNLRVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L++VKGCVPG  KN+++++R
Sbjct: 180 VVTEKNLLVVKGCVPG-HKNAYVIIR 204


>gi|30018380|ref|NP_830011.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 14579]
 gi|42559608|sp|Q81J42|RL3_BACCR RecName: Full=50S ribosomal protein L3
 gi|29893920|gb|AAP07212.1| LSU ribosomal protein L3P [Bacillus cereus ATCC 14579]
          Length = 210

 Score =  158 bits (399), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 93/211 (44%), Positives = 132/211 (62%), Gaps = 4/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+  +   V+  +T + +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGELIPVTVIAANPNVVLQKKTTETDGYNAIQLGFEDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  + +PK+ + E R   D D L VG       F  G++VDVTG++ GKGF
Sbjct: 61  TNKPEQGHTAKASTTPKRFIREIR-DADVDGLEVGQEVKVDVFATGEIVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       +HG S  HR  GS G    P RVFK KK+AGRMGG++VT++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L+LVKG VPGAKK S ++V+ + K
Sbjct: 178 QVDTERNLLLVKGNVPGAKK-SLVVVQGAVK 207


>gi|258406185|ref|YP_003198927.1| 50S ribosomal protein L3 [Desulfohalobium retbaense DSM 5692]
 gi|257798412|gb|ACV69349.1| 50S ribosomal protein L3 [Desulfohalobium retbaense DSM 5692]
          Length = 209

 Score =  158 bits (399), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 88/203 (43%), Positives = 122/203 (60%), Gaps = 2/203 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +KLGMT V+  +G  IPVTV+    C V+  +T + +GY A+Q+GA       V+KP
Sbjct: 6   LIGKKLGMTRVFGEDGTVIPVTVIQAGPCPVIQVKTAETDGYTALQIGADPLPAHRVTKP 65

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
            +G  +       +KL E RV+   +  P G   S   FT+G+ +DVTG + G+GF+GAM
Sbjct: 66  QQGHQAKAGKGCFRKLQEVRVEDAAEYEP-GQELSVDMFTIGERIDVTGKSKGRGFAGAM 124

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR NFGG  +THG    HRS G+ G    P R+FK KKM G MG  RV+V+N EVV +  
Sbjct: 125 KRWNFGGSPSTHGHEKVHRSTGAVGQCAAPSRIFKGKKMPGHMGAQRVSVRNAEVVDIRP 184

Query: 185 KRGLILVKGCVPGAKKNSWILVR 207
           +  LIL++G VPG  KN  I +R
Sbjct: 185 EDNLILLRGQVPGP-KNGVITLR 206


>gi|111115307|ref|YP_709925.1| 50S ribosomal protein L3 [Borrelia afzelii PKo]
 gi|123341335|sp|Q0SN29|RL3_BORAP RecName: Full=50S ribosomal protein L3
 gi|110890581|gb|ABH01749.1| ribosomal protein L3 [Borrelia afzelii PKo]
          Length = 206

 Score =  158 bits (399), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 91/209 (43%), Positives = 130/209 (62%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++   G  +PVTV+      ++  +T+D++GY A+  G+ + K   VSK
Sbjct: 3   GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKVSK 62

Query: 64  PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G + S+ ++ PKK + E    K  D    G       F   + VDVTG T GKGF G
Sbjct: 63  PIKGQYKSLKDIEPKKYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRMGGN+ T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           ++++  ILVKG VPGA K S+++V+ S K
Sbjct: 179 NEEKRAILVKGAVPGA-KGSFVVVKKSKK 206


>gi|300857762|ref|YP_003782745.1| 50S ribosomal protein L3 [Corynebacterium pseudotuberculosis FRC41]
 gi|300685216|gb|ADK28138.1| 50S ribosomal protein L3 [Corynebacterium pseudotuberculosis FRC41]
 gi|302205500|gb|ADL09842.1| 50S ribosomal protein L3 [Corynebacterium pseudotuberculosis C231]
 gi|302330055|gb|ADL20249.1| 50S ribosomal protein L3 [Corynebacterium pseudotuberculosis 1002]
 gi|308275736|gb|ADO25635.1| 50S ribosomal protein L3 [Corynebacterium pseudotuberculosis I19]
          Length = 218

 Score =  158 bits (399), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 84/213 (39%), Positives = 121/213 (56%), Gaps = 2/213 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT +++ + R IPVTV+    C V   RT++ +GY A+Q+  G+   +  +K
Sbjct: 8   GILGTKLGMTQIFDEDNRVIPVTVVEAGPCVVTQIRTIETDGYNAIQIAYGDIDPRKANK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ + E R+  D     +G   +   F     VDVTG T GKG++GA
Sbjct: 68  PATGHFKKAGVTPRRHVAEIRMN-DVSAYELGQDVTVEIFEGITFVDVTGTTKGKGYAGA 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G  A HG   +HR  G  G    PGRVFK  +MAGRMG +RVT +NL+V  +D
Sbjct: 127 MKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGNDRVTTQNLKVQKID 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
               LIL+KG +PG  +   + V+ + K   + 
Sbjct: 187 ADANLILIKGAIPG-NRGGIVTVKTAVKGGAHA 218


>gi|219684396|ref|ZP_03539340.1| ribosomal protein L3 [Borrelia garinii PBr]
 gi|219672385|gb|EED29438.1| ribosomal protein L3 [Borrelia garinii PBr]
          Length = 206

 Score =  158 bits (399), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 92/209 (44%), Positives = 129/209 (61%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++   G  IPVTV+      ++  +T+D++GY A+  G+ + K   VSK
Sbjct: 3   GLIGKKVGMTQIFQKNGIVIPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKVSK 62

Query: 64  PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G + S+ ++ P+K + E    K  D    G       F   + VDVTG T GKGF G
Sbjct: 63  PIKGQYKSLKDIEPQKYVIEL---KGLDGYDPGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRMGGN+ T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNKQTIQNLEVVLI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D++   ILVKG VPGA K S+++V+ S K
Sbjct: 179 DEENRAILVKGAVPGA-KGSFVVVKKSKK 206


>gi|152964657|ref|YP_001360441.1| ribosomal protein L3 [Kineococcus radiotolerans SRS30216]
 gi|189042849|sp|A6W5T8|RL3_KINRD RecName: Full=50S ribosomal protein L3
 gi|151359174|gb|ABS02177.1| ribosomal protein L3 [Kineococcus radiotolerans SRS30216]
          Length = 219

 Score =  158 bits (399), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 86/211 (40%), Positives = 121/211 (57%), Gaps = 2/211 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+  KLGMT +++ + R +PVTV+ ++   V   RT   +GY AVQ+       +  +K
Sbjct: 8   GVLGTKLGMTQLWDADNRIVPVTVVKVEPNVVTQIRTTTVDGYEAVQLATTAIAQRKATK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ L E R     D   +G   +   F  G  VDV G T GKGF+G 
Sbjct: 68  PAAGHFEKAGVAPRRHLVELRTTDAADY-SLGQEVTAEAFATGATVDVVGTTKGKGFAGV 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G+ A+HG   +HR  GS G    PGRVFK  +MAGRMG  R T +NL V +VD
Sbjct: 127 MKRHGFHGVGASHGAHRNHRKPGSIGGCATPGRVFKGMRMAGRMGAARQTTQNLTVQAVD 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            ++GL+L+ G +PG  +   +LV+ + K+ V
Sbjct: 187 AEKGLLLITGAIPG-PRGGLVLVKSASKARV 216


>gi|17231707|ref|NP_488255.1| 50S ribosomal protein L3 [Nostoc sp. PCC 7120]
 gi|42559670|sp|Q8YPH9|RL3_ANASP RecName: Full=50S ribosomal protein L3
 gi|17133350|dbj|BAB75914.1| 50S ribosomal protein L3 [Nostoc sp. PCC 7120]
          Length = 211

 Score =  158 bits (399), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 121/197 (61%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT +++  G  IPVTV+ +  C V   ++   +GY A+QVG GE K K 
Sbjct: 1   MSVGILGTKLGMTQIFDEAGVAIPVTVVQVGPCVVTQVKSKQTDGYAAIQVGYGEVKPKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P+ G  +  +    + L E+      D   +G       F+VG+LVDV G +IG+GF
Sbjct: 61  LNRPLLGHLAKSSAPALRHLKEYHTDGSSDYA-LGQEIKADIFSVGELVDVIGTSIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KR+NFG    +HG S +HR+ GS G    PGRV+  K+MAGR+GG RVT++ L V+
Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGTRVTIRKLTVI 178

Query: 181 SVDDKRGLILVKGCVPG 197
            VD +R L+L+KG VPG
Sbjct: 179 RVDAERNLLLIKGAVPG 195


>gi|218290005|ref|ZP_03494182.1| ribosomal protein L3 [Alicyclobacillus acidocaldarius LAA1]
 gi|218239990|gb|EED07177.1| ribosomal protein L3 [Alicyclobacillus acidocaldarius LAA1]
          Length = 211

 Score =  158 bits (399), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 91/209 (43%), Positives = 125/209 (59%), Gaps = 4/209 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT V+  +G  +PVTV+    C V+  R LDK+GY A+Q+G  + K    +K
Sbjct: 3   GILGRKLGMTQVFTEDGDVVPVTVIEAGPCVVLQKRVLDKDGYEAIQLGFADKKASRATK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G  +    +PK+ + E R    ++   VG       F  G +VDVTG++ GKGF+G 
Sbjct: 63  PEIGHAAKAGTAPKRYIREIRGVNVEE-YEVGQQVKADIFAPGDIVDVTGVSKGKGFAGP 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KRHN       HG S  HR  GS G    P R FK + MAGRMGG RVTV+NLEVV VD
Sbjct: 122 IKRHNQHRGPMAHG-SKYHRGVGSLGSIA-PNRTFKGQTMAGRMGGERVTVQNLEVVKVD 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            ++ +IL+KG VPG  +NS++ +R + K 
Sbjct: 180 PEKNVILIKGSVPGP-RNSFVTIRSAVKQ 207


>gi|284040621|ref|YP_003390551.1| 50S ribosomal protein L3 [Spirosoma linguale DSM 74]
 gi|283819914|gb|ADB41752.1| 50S ribosomal protein L3 [Spirosoma linguale DSM 74]
          Length = 220

 Score =  157 bits (398), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 90/210 (42%), Positives = 128/210 (60%), Gaps = 11/210 (5%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT VYN +G+ +  TV+    C V   R+++K+GY AVQ+G G+ K K+ +
Sbjct: 16  SGLIGKKIGMTSVYNADGQALACTVIETGPCVVTQVRSVEKDGYTAVQLGYGDKKEKHSN 75

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDD----DLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           KP  G F     +PK+KL EF+  + +      L V  VF+ + F     VDV G   G+
Sbjct: 76  KPEMGHFKKAGTTPKRKLVEFKEFEQELALGTTLTVADVFAETDF-----VDVVGTAKGR 130

Query: 119 GFSGAMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           GF G +KRH FGG+   THG     R  GS G    P RVFK  +MAGRMGGNRV V+NL
Sbjct: 131 GFQGVVKRHGFGGVGGQTHGQHNRGRHPGSIGACSFPSRVFKGLRMAGRMGGNRVKVQNL 190

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVR 207
            V+ V  ++ L++V G +PGA KNS++++ 
Sbjct: 191 RVLRVLPEQNLLVVSGSIPGA-KNSYVIIE 219


>gi|71902709|ref|YP_279512.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS6180]
 gi|94987675|ref|YP_595776.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS9429]
 gi|94989555|ref|YP_597655.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS10270]
 gi|94991544|ref|YP_599643.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS2096]
 gi|209558627|ref|YP_002285099.1| 50S ribosomal protein L3 [Streptococcus pyogenes NZ131]
 gi|109893561|sp|Q48VU9|RL3_STRPM RecName: Full=50S ribosomal protein L3
 gi|122986963|sp|Q1JE59|RL3_STRPB RecName: Full=50S ribosomal protein L3
 gi|123382464|sp|Q1JJ62|RL3_STRPD RecName: Full=50S ribosomal protein L3
 gi|123382568|sp|Q1JP17|RL3_STRPC RecName: Full=50S ribosomal protein L3
 gi|226730577|sp|B5XJ36|RL3_STRPZ RecName: Full=50S ribosomal protein L3
 gi|71801804|gb|AAX71157.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS6180]
 gi|94541183|gb|ABF31232.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS9429]
 gi|94543063|gb|ABF33111.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10270]
 gi|94545052|gb|ABF35099.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS2096]
 gi|209539828|gb|ACI60404.1| LSU ribosomal protein L3p (L3e) [Streptococcus pyogenes NZ131]
          Length = 208

 Score =  157 bits (398), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 94/213 (44%), Positives = 132/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  S   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK++AGRMGGNRVTV+NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207


>gi|30260301|ref|NP_842678.1| 50S ribosomal protein L3 [Bacillus anthracis str. Ames]
 gi|42779191|ref|NP_976438.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 10987]
 gi|47525366|ref|YP_016715.1| 50S ribosomal protein L3 [Bacillus anthracis str. 'Ames Ancestor']
 gi|49183144|ref|YP_026396.1| 50S ribosomal protein L3 [Bacillus anthracis str. Sterne]
 gi|49479271|ref|YP_034462.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|52145108|ref|YP_081721.1| 50S ribosomal protein L3 [Bacillus cereus E33L]
 gi|118475879|ref|YP_893030.1| 50S ribosomal protein L3 [Bacillus thuringiensis str. Al Hakam]
 gi|206972204|ref|ZP_03233151.1| 50S ribosomal protein L3 [Bacillus cereus AH1134]
 gi|217957685|ref|YP_002336229.1| 50S ribosomal protein L3 [Bacillus cereus AH187]
 gi|218230754|ref|YP_002364959.1| 50S ribosomal protein L3 [Bacillus cereus B4264]
 gi|218901314|ref|YP_002449148.1| ribosomal protein L3 [Bacillus cereus AH820]
 gi|222093880|ref|YP_002527930.1| 50S ribosomal protein l3 [Bacillus cereus Q1]
 gi|225862162|ref|YP_002747540.1| 50S ribosomal protein L3 [Bacillus cereus 03BB102]
 gi|227812783|ref|YP_002812792.1| 50S ribosomal protein L3 [Bacillus anthracis str. CDC 684]
 gi|228912849|ref|ZP_04076496.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228919060|ref|ZP_04082439.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228983365|ref|ZP_04143578.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229089241|ref|ZP_04220522.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-42]
 gi|229153888|ref|ZP_04282018.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 4342]
 gi|229182504|ref|ZP_04309755.1| 50S ribosomal protein L3 [Bacillus cereus BGSC 6E1]
 gi|229188395|ref|ZP_04315443.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 10876]
 gi|229194500|ref|ZP_04321303.1| 50S ribosomal protein L3 [Bacillus cereus m1293]
 gi|229603960|ref|YP_002864761.1| 50S ribosomal protein L3 [Bacillus anthracis str. A0248]
 gi|254684386|ref|ZP_05148246.1| 50S ribosomal protein L3 [Bacillus anthracis str. CNEVA-9066]
 gi|254720832|ref|ZP_05182624.1| 50S ribosomal protein L3 [Bacillus anthracis str. A1055]
 gi|254733589|ref|ZP_05191309.1| 50S ribosomal protein L3 [Bacillus anthracis str. Western North
           America USA6153]
 gi|254739507|ref|ZP_05197204.1| 50S ribosomal protein L3 [Bacillus anthracis str. Kruger B]
 gi|254751228|ref|ZP_05203266.1| 50S ribosomal protein L3 [Bacillus anthracis str. Vollum]
 gi|254756765|ref|ZP_05208794.1| 50S ribosomal protein L3 [Bacillus anthracis str. Australia 94]
 gi|296500944|ref|YP_003662644.1| 50S ribosomal protein L3 [Bacillus thuringiensis BMB171]
 gi|300119578|ref|ZP_07057122.1| 50S ribosomal protein L3 [Bacillus cereus SJ1]
 gi|301051847|ref|YP_003790058.1| 50S ribosomal protein L3 [Bacillus anthracis CI]
 gi|42559609|sp|Q81VT0|RL3_BACAN RecName: Full=50S ribosomal protein L3
 gi|81824428|sp|Q63H90|RL3_BACCZ RecName: Full=50S ribosomal protein L3
 gi|81828437|sp|Q6HPQ8|RL3_BACHK RecName: Full=50S ribosomal protein L3
 gi|81831213|sp|Q73F96|RL3_BACC1 RecName: Full=50S ribosomal protein L3
 gi|166233117|sp|A0R8I0|RL3_BACAH RecName: Full=50S ribosomal protein L3
 gi|226725129|sp|B7JKB9|RL3_BACC0 RecName: Full=50S ribosomal protein L3
 gi|226725131|sp|B7HJ48|RL3_BACC4 RecName: Full=50S ribosomal protein L3
 gi|226725132|sp|B7HQU4|RL3_BACC7 RecName: Full=50S ribosomal protein L3
 gi|254803651|sp|C3P9Q5|RL3_BACAA RecName: Full=50S ribosomal protein L3
 gi|254803652|sp|C3LJ82|RL3_BACAC RecName: Full=50S ribosomal protein L3
 gi|254803653|sp|C1ET39|RL3_BACC3 RecName: Full=50S ribosomal protein L3
 gi|254803654|sp|B9IZJ4|RL3_BACCQ RecName: Full=50S ribosomal protein L3
 gi|30253622|gb|AAP24164.1| 50S ribosomal protein L3 [Bacillus anthracis str. Ames]
 gi|42735106|gb|AAS39046.1| ribosomal protein L3 [Bacillus cereus ATCC 10987]
 gi|47500514|gb|AAT29190.1| ribosomal protein L3 [Bacillus anthracis str. 'Ames Ancestor']
 gi|49177071|gb|AAT52447.1| ribosomal protein L3 [Bacillus anthracis str. Sterne]
 gi|49330827|gb|AAT61473.1| ribosomal protein L3 (50S ribosomal protein L3) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|51978577|gb|AAU20127.1| ribosomal protein L3 (50S ribosomal protein L3) [Bacillus cereus
           E33L]
 gi|118415104|gb|ABK83523.1| LSU ribosomal protein L3P [Bacillus thuringiensis str. Al Hakam]
 gi|206732778|gb|EDZ49953.1| 50S ribosomal protein L3 [Bacillus cereus AH1134]
 gi|217067429|gb|ACJ81679.1| ribosomal protein L3 [Bacillus cereus AH187]
 gi|218158711|gb|ACK58703.1| ribosomal protein L3 [Bacillus cereus B4264]
 gi|218534762|gb|ACK87160.1| ribosomal protein L3 [Bacillus cereus AH820]
 gi|221237928|gb|ACM10638.1| ribosomal protein L3 (50S ribosomal protein L3) [Bacillus cereus
           Q1]
 gi|225787302|gb|ACO27519.1| 50S ribosomal protein L3 [Bacillus cereus 03BB102]
 gi|227007571|gb|ACP17314.1| 50S ribosomal protein L3 [Bacillus anthracis str. CDC 684]
 gi|228588966|gb|EEK46981.1| 50S ribosomal protein L3 [Bacillus cereus m1293]
 gi|228595069|gb|EEK52840.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 10876]
 gi|228600959|gb|EEK58528.1| 50S ribosomal protein L3 [Bacillus cereus BGSC 6E1]
 gi|228629569|gb|EEK86266.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 4342]
 gi|228694080|gb|EEL47762.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-42]
 gi|228776355|gb|EEM24708.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228840585|gb|EEM85847.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228846785|gb|EEM91790.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229268368|gb|ACQ50005.1| 50S ribosomal protein L3 [Bacillus anthracis str. A0248]
 gi|296321996|gb|ADH04924.1| 50S ribosomal protein L3 [Bacillus thuringiensis BMB171]
 gi|298723050|gb|EFI63948.1| 50S ribosomal protein L3 [Bacillus cereus SJ1]
 gi|300374016|gb|ADK02920.1| 50S ribosomal protein L3 [Bacillus cereus biovar anthracis str. CI]
 gi|324324101|gb|ADY19361.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 210

 Score =  157 bits (398), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 93/211 (44%), Positives = 132/211 (62%), Gaps = 4/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+  +   V+  +T + +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGELIPVTVIAANPNVVLQKKTTETDGYNAIQLGFEDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  + +PK+ + E R   D D L VG       F  G++VDVTG++ GKGF
Sbjct: 61  TNKPEQGHTAKASTTPKRFIREIR-DADVDGLEVGQEVKVDVFATGEIVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       +HG S  HR  GS G    P RVFK KK+AGRMGG++VT++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L+LVKG VPGAKK S ++V+ + K
Sbjct: 178 QVDTERNLLLVKGNVPGAKK-SLVVVQGAVK 207


>gi|169823852|ref|YP_001691463.1| 50S ribosomal protein L3 [Finegoldia magna ATCC 29328]
 gi|303234744|ref|ZP_07321370.1| 50S ribosomal protein L3 [Finegoldia magna BVS033A4]
 gi|226725177|sp|B0RZU0|RL3_FINM2 RecName: Full=50S ribosomal protein L3
 gi|167830657|dbj|BAG07573.1| 50S ribosomal protein L3 [Finegoldia magna ATCC 29328]
 gi|302494085|gb|EFL53865.1| 50S ribosomal protein L3 [Finegoldia magna BVS033A4]
          Length = 209

 Score =  157 bits (398), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 90/208 (43%), Positives = 129/208 (62%), Gaps = 3/208 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT ++N +G  +PVTV+      V   +T +K GY A+QVG  E K K+V++P
Sbjct: 4   ILGKKIGMTQIFNEDGSVVPVTVIEAGPMVVTQIKTKEKEGYNAIQVGYIEKKEKHVNQP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           MRG F    VS KK L EF++  DD+   +G       F  G +VDV G++ GKG  GA+
Sbjct: 64  MRGHFGKAGVSFKKHLREFKIN-DDEQFNLGDEIKLDIFQDGDVVDVIGISKGKGTQGAI 122

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
            RHN+      HG S SHR  G+      P RVFK +K +G+MG +RVTV+NL++V VD+
Sbjct: 123 VRHNYSRGPMGHG-SKSHRVAGARSAGSYPARVFKGRKGSGKMGHDRVTVQNLKIVKVDN 181

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +R L+L+KG VPG  K   + VR++ KS
Sbjct: 182 ERNLLLIKGAVPG-NKGGVVTVREAIKS 208


>gi|253995718|ref|YP_003047782.1| 50S ribosomal protein L3 [Methylotenera mobilis JLW8]
 gi|253982397|gb|ACT47255.1| ribosomal protein L3 [Methylotenera mobilis JLW8]
          Length = 216

 Score =  157 bits (398), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 88/214 (41%), Positives = 129/214 (60%), Gaps = 6/214 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  +G  +PVTVL +   +V   +T   +GY  +QV  G  +   
Sbjct: 1   MSLGLIGRKVGMTRVFTEDGASVPVTVLEVVPNRVTQIKTTASDGYTGLQVAYGTRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP---VGSVFSPSYFTVGQLVDVTGMTIG 117
           ++K + G ++    +    + EF V   DD+L     G+  +   F  GQ VDVTG ++G
Sbjct: 61  INKALTGHYAKSGSAAGAGIHEFSV--GDDVLANYTPGANITVDIFQAGQKVDVTGTSLG 118

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF+GA+KRH+F   RA+HG S SH   GS G  QDPGRVF  K+M G +G  +VT +NL
Sbjct: 119 KGFAGAIKRHHFSSNRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMPGHLGAVKVTTQNL 178

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           E+V VD +R L+L+KG +PG+K    ++VR + K
Sbjct: 179 EIVRVDVERNLLLIKGAIPGSKGGD-VVVRPAIK 211


>gi|171462879|ref|YP_001796992.1| ribosomal protein L3 [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|226730546|sp|B1XSQ1|RL3_POLNS RecName: Full=50S ribosomal protein L3
 gi|171192417|gb|ACB43378.1| ribosomal protein L3 [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 218

 Score =  157 bits (398), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 86/207 (41%), Positives = 123/207 (59%), Gaps = 2/207 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  EG  IPVTV+ + + +V   +T   NGY A+Q+  G  +   
Sbjct: 1   MSLGLIGRKVGMTRLFTDEGEAIPVTVIDVSDNRVAQIKTQATNGYDAIQLAHGTRRATR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQ--KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           V+K M G F+   V     L EF +   K  ++ P   + + + FT GQ VDV G+TIGK
Sbjct: 61  VTKAMAGHFAKAGVMAGNALNEFHLDAAKIAEMTPGQVIPAETAFTAGQKVDVQGVTIGK 120

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           G++G +KR++F   RA+HG S SH   GS G  QDPGRVF  K+M G +G    TV+NL 
Sbjct: 121 GYAGTIKRYHFASGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDITRTVQNLV 180

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWIL 205
           +  +D +R LI+VKG +PGA     I+
Sbjct: 181 IARIDAERNLIMVKGAIPGAPGGKVIV 207


>gi|300857246|ref|YP_003782230.1| 50S ribosomal protein L3 [Clostridium ljungdahlii DSM 13528]
 gi|300437361|gb|ADK17128.1| 50S ribosomal protein L3 [Clostridium ljungdahlii DSM 13528]
          Length = 209

 Score =  157 bits (398), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 127/212 (59%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ RKLGMT ++N  G+ IPVTV+    C V+  +T++K+GY AVQVG  + + K 
Sbjct: 1   MKKAILGRKLGMTQIFNENGKVIPVTVIEAGPCAVIQKKTVEKDGYEAVQVGFSDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+G F    V+ K+ + EF+++   +    G       FT G  VDV+G++ GKGF
Sbjct: 61  VNKPMKGHFEKAGVTLKRFIKEFKLENASEYKE-GQEIKADVFTAGDKVDVSGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR N      +HG S  HR+ GS G   DP R FKN KMAG MG    TV NLEV 
Sbjct: 120 QGTIKRWNAQRGPMSHG-SKFHRAPGSMGACSDPSRTFKNMKMAGHMGNRNTTVLNLEVA 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ +IL+KG VPG  K   + +R++ K+
Sbjct: 179 KVIPEKNIILIKGGVPGPNK-GLVAIRNTVKA 209


>gi|15896383|ref|NP_349732.1| 50S ribosomal protein L3 [Clostridium acetobutylicum ATCC 824]
 gi|42559679|sp|Q97EH8|RL3_CLOAB RecName: Full=50S ribosomal protein L3
 gi|15026199|gb|AAK81072.1|AE007808_25 Ribosomal protein L3 [Clostridium acetobutylicum ATCC 824]
          Length = 209

 Score =  157 bits (398), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 91/214 (42%), Positives = 135/214 (63%), Gaps = 7/214 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +KLGMT ++N EG+ +PVTV+    C V+  +T +K GY A+QVG G  + K 
Sbjct: 1   MKKGILGKKLGMTQIFNEEGKVVPVTVIEAGPCVVIQKKTSEKEGYDAIQVGFGTIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F+  NV  K+ + EFR++ D     VG+      F  G+ VDV+G++ GKGF
Sbjct: 61  VNKPLKGHFAKGNVELKRFVKEFRLE-DTSSYEVGAEIKADIFAAGEKVDVSGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRA--THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
            G ++R  +G  R   +HG S  HR+ GS G   DP R FK+KKM G MG    TV N+E
Sbjct: 120 QGTIRR--WGAHRGPMSHG-SKFHRAVGSMGGSSDPSRTFKSKKMPGHMGHVNTTVLNVE 176

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V  V  ++ LIL+KG VPG  K S++++++S K+
Sbjct: 177 VAKVIPEKNLILIKGGVPGPNK-SFVVIKNSVKA 209


>gi|257866529|ref|ZP_05646182.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC30]
 gi|257870517|ref|ZP_05650170.1| 50S ribosomal protein L3 [Enterococcus gallinarum EG2]
 gi|257872956|ref|ZP_05652609.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC10]
 gi|257876133|ref|ZP_05655786.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC20]
 gi|325567376|ref|ZP_08144043.1| 50S ribosomal protein L3 [Enterococcus casseliflavus ATCC 12755]
 gi|257800487|gb|EEV29515.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC30]
 gi|257804681|gb|EEV33503.1| 50S ribosomal protein L3 [Enterococcus gallinarum EG2]
 gi|257807120|gb|EEV35942.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC10]
 gi|257810299|gb|EEV39119.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC20]
 gi|325158809|gb|EGC70955.1| 50S ribosomal protein L3 [Enterococcus casseliflavus ATCC 12755]
          Length = 209

 Score =  157 bits (398), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 131/212 (61%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY A+QVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQVKTIENDGYEAIQVGYQDMREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF+   + + L VGS      F  G ++DVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREFK-NVELEGLEVGSEIKVDIFEAGDIIDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK++AGRMGGNR+T++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRITIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R +IL+KG VPGAKK S I ++ + K+
Sbjct: 178 RVDAERNVILIKGNVPGAKK-SLITIKSAVKA 208


>gi|167771267|ref|ZP_02443320.1| hypothetical protein ANACOL_02625 [Anaerotruncus colihominis DSM
           17241]
 gi|167666518|gb|EDS10648.1| hypothetical protein ANACOL_02625 [Anaerotruncus colihominis DSM
           17241]
          Length = 210

 Score =  157 bits (398), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 86/212 (40%), Positives = 125/212 (58%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  +V +K+GMT +++  G+ IPVTV+    C VV  +T + +GY AVQ+G G+   K 
Sbjct: 1   MQKCIVGKKIGMTQLFDESGKMIPVTVVEAGPCVVVQKKTTENDGYEAVQLGFGDISEKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F+   V+ K+ L EFR+  D   L VG +     F VG  VDV G++ GKG+
Sbjct: 61  VNKPLKGHFAKAGVALKRVLREFRLD-DCSALSVGDIIKADTFAVGDAVDVAGVSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR     L+ THG     R  GS G    P RVFK K + G MG   VTV+NL +V
Sbjct: 120 AGTIKRFGNHRLKETHGSGPVARHAGSNGACSSPSRVFKGKGLPGHMGAENVTVQNLSIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +D +  LI ++G +PGA K   + + DS K+
Sbjct: 180 KIDAENNLIAIRGAIPGA-KGGVVFITDSVKA 210


>gi|254449764|ref|ZP_05063201.1| ribosomal protein L3 [Octadecabacter antarcticus 238]
 gi|198264170|gb|EDY88440.1| ribosomal protein L3 [Octadecabacter antarcticus 238]
          Length = 163

 Score =  157 bits (398), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 75/124 (60%), Positives = 95/124 (76%), Gaps = 1/124 (0%)

Query: 88  DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGS 147
           +++L+ VG     S++  GQ VDV+G +IGKGF+GAMKRHNF GLRATHGVS+SHRSHGS
Sbjct: 3   EENLIAVGEEIIASHYFEGQFVDVSGTSIGKGFAGAMKRHNFSGLRATHGVSVSHRSHGS 62

Query: 148 TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVR 207
           TG  QDPG+VFK KKMAG MG  ++T +NL V+  D  RGLI+VKG VPG+ K  W+ V+
Sbjct: 63  TGQCQDPGKVFKGKKMAGHMGSAKITTQNLVVIKTDLDRGLIMVKGAVPGS-KGGWVTVK 121

Query: 208 DSFK 211
           D+ K
Sbjct: 122 DAVK 125


>gi|325972661|ref|YP_004248852.1| 50S ribosomal protein L3 [Spirochaeta sp. Buddy]
 gi|324027899|gb|ADY14658.1| 50S ribosomal protein L3 [Spirochaeta sp. Buddy]
          Length = 206

 Score =  157 bits (398), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 90/208 (43%), Positives = 127/208 (61%), Gaps = 5/208 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +GR  PVTV+ ++   VV  RT +K+GY A  +G+ + K   ++K
Sbjct: 3   GLIGKKVGMTQVFDAQGRLTPVTVIKIEGNVVVGERTDEKHGYSAAVLGSVDKKKSTITK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+ V   PKK + EFR    D  L VG V     F     VDVTG T GKG++G 
Sbjct: 63  PYAGQFTDV-CEPKKHVIEFR--DFDKELTVGEVLGVDIFKDATFVDVTGTTKGKGYAGG 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KRH F G RATHG S  HR  G T     P R FK  +MAG MG  R+TV+NL+VV VD
Sbjct: 120 IKRHGFSGGRATHG-SKFHRDIGGTAMSSTPARTFKGHRMAGHMGNERMTVQNLKVVRVD 178

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
           ++  +++VKG +PG  + S ++V+ + K
Sbjct: 179 EEMQVLMVKGAIPGPAQ-SVVIVKKAIK 205


>gi|300088197|ref|YP_003758719.1| 50S ribosomal protein L3 [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527930|gb|ADJ26398.1| 50S ribosomal protein L3 [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 207

 Score =  157 bits (398), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 91/199 (45%), Positives = 124/199 (62%), Gaps = 5/199 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M +G++ +KLGMT VY+ EG+  PVTVL +  C VV  +T +++GY A Q+G GE K   
Sbjct: 1   MINGIIGKKLGMTQVYSTEGKMEPVTVLQVGPCTVVQVKTPERDGYTAAQLGFGEDK--K 58

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++K  +G          + L EFR+  D D + VG+    S F  G+ VDVTG++ G+GF
Sbjct: 59  LTKAEQGHVKEYGNF--RHLREFRLD-DLDGVEVGARVDASLFVDGERVDVTGISKGRGF 115

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH F G   THG S  HR+ GS G    PGRVFK  +MAG MG  +VTV  L+VV
Sbjct: 116 AGTVKRHGFAGGPKTHGQSDRHRAPGSIGATTTPGRVFKGTRMAGHMGNEQVTVSGLKVV 175

Query: 181 SVDDKRGLILVKGCVPGAK 199
             D ++ L+LVKG VPGA+
Sbjct: 176 KTDVEKNLLLVKGAVPGAR 194


>gi|154494380|ref|ZP_02033700.1| hypothetical protein PARMER_03735 [Parabacteroides merdae ATCC
           43184]
 gi|218262297|ref|ZP_03476811.1| hypothetical protein PRABACTJOHN_02485 [Parabacteroides johnsonii
           DSM 18315]
 gi|154085824|gb|EDN84869.1| hypothetical protein PARMER_03735 [Parabacteroides merdae ATCC
           43184]
 gi|218223448|gb|EEC96098.1| hypothetical protein PRABACTJOHN_02485 [Parabacteroides johnsonii
           DSM 18315]
          Length = 205

 Score =  157 bits (398), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 88/205 (42%), Positives = 126/205 (61%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EG+ +P TV+ +  C V   +TL+K+GY AVQ+G  E K K+ ++
Sbjct: 3   GLLGKKIGMTSVFSAEGKNLPCTVIEVGPCVVTQIKTLEKDGYEAVQLGFEEKKEKHTTQ 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+PK+ L EF+  + +  L  G V +  Y      VDV G + GKGF G 
Sbjct: 63  PEMGHFKKAGVTPKRYLAEFKNFETEYKL--GDVITVDYLEDAGFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ + THG     R+ G  G    P +VFK  +MAG+MG  RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRLRAPGGIGACSYPAKVFKGMRMAGQMGNERVTVQNLQVIKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  L+LVKG VPGA K S +L+ 
Sbjct: 181 MPEHNLLLVKGSVPGA-KGSILLIE 204


>gi|325510539|gb|ADZ22175.1| 50S ribosomal protein L3 [Clostridium acetobutylicum EA 2018]
          Length = 210

 Score =  157 bits (397), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 91/214 (42%), Positives = 135/214 (63%), Gaps = 7/214 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +KLGMT ++N EG+ +PVTV+    C V+  +T +K GY A+QVG G  + K 
Sbjct: 2   MKKGILGKKLGMTQIFNEEGKVVPVTVIEAGPCVVIQKKTSEKEGYDAIQVGFGTIREKL 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F+  NV  K+ + EFR++ D     VG+      F  G+ VDV+G++ GKGF
Sbjct: 62  VNKPLKGHFAKGNVELKRFVKEFRLE-DTSSYEVGAEIKADIFAAGEKVDVSGVSKGKGF 120

Query: 121 SGAMKRHNFGGLRA--THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
            G ++R  +G  R   +HG S  HR+ GS G   DP R FK+KKM G MG    TV N+E
Sbjct: 121 QGTIRR--WGAHRGPMSHG-SKFHRAVGSMGGSSDPSRTFKSKKMPGHMGHVNTTVLNVE 177

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V  V  ++ LIL+KG VPG  K S++++++S K+
Sbjct: 178 VAKVIPEKNLILIKGGVPGPNK-SFVVIKNSVKA 210


>gi|225548727|ref|ZP_03769774.1| ribosomal protein L3 [Borrelia burgdorferi 94a]
 gi|225370757|gb|EEH00193.1| ribosomal protein L3 [Borrelia burgdorferi 94a]
          Length = 206

 Score =  157 bits (397), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 90/209 (43%), Positives = 130/209 (62%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++   G  +PVTV+      ++  +T+D++GY A+  G+ + K   VSK
Sbjct: 3   GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKVSK 62

Query: 64  PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G + S+ ++ PK+ + E    K  D    G       F   + VDVTG T GKGF G
Sbjct: 63  PIKGQYKSLKDIEPKRCVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRMGGN+ T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D+++  +LVKG VPGA K S+++V+ S K
Sbjct: 179 DEEKRALLVKGAVPGA-KGSFVVVKKSKK 206


>gi|119953267|ref|YP_945476.1| 50S ribosomal protein L3 [Borrelia turicatae 91E135]
 gi|254803656|sp|A1QZR4|RL3_BORT9 RecName: Full=50S ribosomal protein L3
 gi|119862038|gb|AAX17806.1| LSU ribosomal protein L3P [Borrelia turicatae 91E135]
          Length = 209

 Score =  157 bits (397), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 133/212 (62%), Gaps = 6/212 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V+   G  +PVTV+  +   V+  +T++++GY A+ +G+ + +   +SK
Sbjct: 3   GLIGKKVGMTQVFQGNGVVVPVTVIEFEPNYVIGKKTVERDGYDALIMGSVDLRSSKISK 62

Query: 64  PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P+RG + ++ NV PK+ + EF+  K  D    G       F   + VD+TG T GKGF G
Sbjct: 63  PIRGQYKNLENVEPKRYVIEFKGLKGYD---AGDEIGLDAFREIKYVDITGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRMGG + T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGEQQTIQNLEVVFI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D+++  ILVKG VPG  K S+++V+ + K  V
Sbjct: 179 DEEKRAILVKGAVPGV-KGSFVIVKKAKKVGV 209


>gi|239817873|ref|YP_002946783.1| 50S ribosomal protein L3 [Variovorax paradoxus S110]
 gi|259709746|sp|C5CP53|RL3_VARPS RecName: Full=50S ribosomal protein L3
 gi|239804450|gb|ACS21517.1| ribosomal protein L3 [Variovorax paradoxus S110]
          Length = 226

 Score =  157 bits (397), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 86/211 (40%), Positives = 128/211 (60%), Gaps = 3/211 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  +PVTV+ + N +V   ++ + +GY+A+QV  G  K   V+K
Sbjct: 8   GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQIKSQETDGYVALQVTFGSRKASRVTK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDD-LLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFS 121
           P  G  +   V   + + EFRV  D       G+V + S  F+VGQ VDV G +IGKG++
Sbjct: 68  PQAGHLAKAGVEAGEIIREFRVTADTAGQHKAGAVIAASSVFSVGQKVDVQGTSIGKGYA 127

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHN    RA+HG S SH   GS G  QDPGRVF  K+M G +G    T +NL+V  
Sbjct: 128 GTIKRHNMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTKTTQNLDVFR 187

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +D+ R L+L+KG +PG+ K  ++ VR + K+
Sbjct: 188 IDEARQLLLIKGAIPGS-KGGFVTVRPAIKA 217


>gi|186684510|ref|YP_001867706.1| 50S ribosomal protein L3 [Nostoc punctiforme PCC 73102]
 gi|226730541|sp|B2ITQ5|RL3_NOSP7 RecName: Full=50S ribosomal protein L3
 gi|186466962|gb|ACC82763.1| ribosomal protein L3 [Nostoc punctiforme PCC 73102]
          Length = 210

 Score =  157 bits (397), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 81/197 (41%), Positives = 119/197 (60%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT +++  G  IPVTV+    C V   +T   +GY A+QVG GE K K 
Sbjct: 1   MSVGILGTKLGMTQIFDEAGVAIPVTVIQAGPCTVTQVKTKQTDGYFAIQVGFGEVKPKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P+ G  +  +    + L E+      D   +G       F+ GQ+VDV G +IG+GF
Sbjct: 61  LNRPLLGHLAKSSAPALRHLNEYHTDSSSDYA-LGQQIKADIFSEGQIVDVVGTSIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KR+NFG    +HG S +HR+ GS G    PGRV+  K+MAGR+GG R+T++ L +V
Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGKRITIRKLTIV 178

Query: 181 SVDDKRGLILVKGCVPG 197
            VD +R L+L+KG +PG
Sbjct: 179 RVDAERNLLLIKGAIPG 195


>gi|313680515|ref|YP_004058254.1| LSU ribosomal protein l3p [Oceanithermus profundus DSM 14977]
 gi|313153230|gb|ADR37081.1| LSU ribosomal protein L3P [Oceanithermus profundus DSM 14977]
          Length = 208

 Score =  157 bits (397), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 125/209 (59%), Gaps = 7/209 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  K+GMT ++  + R IPVTV+    C VV  ++ +++GY AVQ+G    + K V+K
Sbjct: 3   GILGAKVGMTQIWKND-RAIPVTVVLAGPCPVVQRKSPERDGYAAVQLGFVPLEPKRVNK 61

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           PM+G F+  +  P + L E R     D  P G V +   F  G  VDVTG + G+G +G 
Sbjct: 62  PMKGHFAKFSAEPVRYLREIR-----DFEPEGDVVTVEIFQPGDKVDVTGTSKGRGTAGV 116

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR NF G  A+HG    HR  GS G R+ PGRV+K KKMAG  G  R+TV+NLEVV V 
Sbjct: 117 MKRWNFAGGPASHGAHRIHRHGGSIGQRKAPGRVYKGKKMAGHYGAERITVQNLEVVEVI 176

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  L+L+KG +PG      ++VR++ + 
Sbjct: 177 PEENLLLIKGAIPGP-NGGLVVVRETTRD 204


>gi|50913439|ref|YP_059411.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS10394]
 gi|73917496|sp|Q5XED5|RL3_STRP6 RecName: Full=50S ribosomal protein L3
 gi|50902513|gb|AAT86228.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10394]
          Length = 208

 Score =  157 bits (397), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 95/213 (44%), Positives = 132/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  S   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK++AGRMGGNRVTV+NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +ILVKG VPGAKK S I ++ + K+A
Sbjct: 176 QVILEKNVILVKGNVPGAKK-SLITIKSAVKAA 207


>gi|323703548|ref|ZP_08115194.1| 50S ribosomal protein L3 [Desulfotomaculum nigrificans DSM 574]
 gi|323531539|gb|EGB21432.1| 50S ribosomal protein L3 [Desulfotomaculum nigrificans DSM 574]
          Length = 209

 Score =  157 bits (397), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 127/212 (59%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++N EG  IPVTV+    C VV  +T++ +GY A+Q+G GE +   
Sbjct: 1   MPVGILGKKVGMTQIFNKEGIAIPVTVVEAGPCVVVQKKTVETDGYNAIQLGFGEKREAL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G  +   V P + L E RV+ D +   VG       F  GQ VDV G + G+GF
Sbjct: 61  INKPTKGHLAKAGVRPVRFLRELRVE-DPNAYEVGQEIKADIFNEGQKVDVVGTSKGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNF      HG S  HR  GS+  +  P R FK +K+ G  G  RVTV+NLEVV
Sbjct: 120 AGGIKRHNFHRGPMAHG-SKYHRRPGSSAAK-GPARTFKGRKLPGHYGVERVTVQNLEVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+ +KG VPG  +   +LV++S K+
Sbjct: 178 KVDPERNLLAIKGAVPGP-RGGLLLVKNSVKA 208


>gi|226950933|ref|YP_002806024.1| ribosomal protein L3 [Clostridium botulinum A2 str. Kyoto]
 gi|254803664|sp|C1FMV1|RL3_CLOBJ RecName: Full=50S ribosomal protein L3
 gi|226840834|gb|ACO83500.1| ribosomal protein L3 [Clostridium botulinum A2 str. Kyoto]
          Length = 209

 Score =  157 bits (396), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +KLGMT ++N  G+ IPVTV+    C V+  +T++K+GY A+QV  G+ + K 
Sbjct: 1   MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP++G F+   VS K+ + EF+++ D + L +G       F  G+ VD++G++ GKGF
Sbjct: 61  RNKPVKGHFAKAGVSVKRHIKEFKLE-DLNSLEIGQEIKADVFEAGERVDISGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G ++R N      +HG S  HR+ GS G   DP R FKNK+M G MG    TV NLEVV
Sbjct: 120 QGTIRRWNAHRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  ++ LIL+KG VPG  K   + +R++ K+
Sbjct: 179 RIIPEKNLILIKGGVPGPNK-GLVQIRNTVKA 209


>gi|22536243|ref|NP_687094.1| 50S ribosomal protein L3 [Streptococcus agalactiae 2603V/R]
 gi|25010133|ref|NP_734528.1| 50S ribosomal protein L3 [Streptococcus agalactiae NEM316]
 gi|76786764|ref|YP_328784.1| 50S ribosomal protein L3 [Streptococcus agalactiae A909]
 gi|76798231|ref|ZP_00780481.1| ribosomal protein L3 [Streptococcus agalactiae 18RS21]
 gi|77406990|ref|ZP_00784005.1| ribosomal protein L3 [Streptococcus agalactiae H36B]
 gi|77412293|ref|ZP_00788609.1| ribosomal protein L3 [Streptococcus agalactiae CJB111]
 gi|42559639|sp|Q8E2D1|RL3_STRA5 RecName: Full=50S ribosomal protein L3
 gi|42559641|sp|Q8E7T8|RL3_STRA3 RecName: Full=50S ribosomal protein L3
 gi|109893560|sp|Q3K3W9|RL3_STRA1 RecName: Full=50S ribosomal protein L3
 gi|22533063|gb|AAM98966.1|AE014194_11 ribosomal protein L3 [Streptococcus agalactiae 2603V/R]
 gi|23094484|emb|CAD45703.1| ribosomal protein L3 [Streptococcus agalactiae NEM316]
 gi|76561821|gb|ABA44405.1| ribosomal protein L3 [Streptococcus agalactiae A909]
 gi|76586440|gb|EAO62948.1| ribosomal protein L3 [Streptococcus agalactiae 18RS21]
 gi|77161683|gb|EAO72678.1| ribosomal protein L3 [Streptococcus agalactiae CJB111]
 gi|77174395|gb|EAO77249.1| ribosomal protein L3 [Streptococcus agalactiae H36B]
 gi|319743995|gb|EFV96375.1| 50S ribosomal protein L3 [Streptococcus agalactiae ATCC 13813]
          Length = 208

 Score =  157 bits (396), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/213 (43%), Positives = 132/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  S   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK++AGRMGGNRVTV+NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ ++L+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVVLIKGNVPGAKK-SLITIKSAVKAA 207


>gi|37519654|ref|NP_923031.1| 50S ribosomal protein L3 [Gloeobacter violaceus PCC 7421]
 gi|42559594|sp|Q7NPH0|RL3_GLOVI RecName: Full=50S ribosomal protein L3
 gi|35210645|dbj|BAC88026.1| 50S ribosomal protein L3 [Gloeobacter violaceus PCC 7421]
          Length = 215

 Score =  157 bits (396), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/219 (42%), Positives = 127/219 (57%), Gaps = 5/219 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RKLGMT +++ EGR IPVTV+    C V   ++   +GY AVQ+G G A+ K 
Sbjct: 1   MSLGILGRKLGMTQIFDEEGRAIPVTVVEAGPCPVTQVKSEATDGYTAVQLGFGTAREKV 60

Query: 61  VSKPMRGFFSSVNV-SPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +++P  G      + +P + L EFR+       P G   +   F  GQLVDV G +IGKG
Sbjct: 61  LTRPEVGHCKKAGLEAPVRHLREFRLPDSSQYTP-GQQITVDLFAAGQLVDVVGTSIGKG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G  KRH+FG     HG S +HR+ GS G    PGRVF  K+M GRMG  RVTV+ L V
Sbjct: 120 FAGGQKRHHFGRGPMAHG-SKNHRAPGSIGAGTTPGRVFPGKRMPGRMGNERVTVRKLTV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           V V  +R +IL++G +PG +    +L+    KS    KG
Sbjct: 179 VRVIPERNVILIQGGLPGVE--GGLLMISPAKSVGRAKG 215


>gi|317507409|ref|ZP_07965143.1| 50S ribosomal protein L3 [Segniliparus rugosus ATCC BAA-974]
 gi|316254294|gb|EFV13630.1| 50S ribosomal protein L3 [Segniliparus rugosus ATCC BAA-974]
          Length = 212

 Score =  157 bits (396), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 90/211 (42%), Positives = 121/211 (57%), Gaps = 2/211 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      V   RT +++ Y AVQ+  G+   + V+K
Sbjct: 2   GLLGAKLGMTQVFDERNRVVPVTVIRTGVNIVTQIRTPERDKYSAVQLAFGQIDPRKVNK 61

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+P++ L E R++ D     VG     S F  G LVDVTG + GKGF+G 
Sbjct: 62  PLTGQFEKAGVTPRRHLAELRLE-DVSGYEVGQQLDVSVFADGDLVDVTGTSKGKGFAGT 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G  A HG    HR  GS G    PGRVFK  +MAGRMG  + T +NL V  VD
Sbjct: 121 MKRHGFKGQGAAHGAHKVHRRPGSIGACAFPGRVFKGTRMAGRMGNAKTTTQNLTVFRVD 180

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            + G++L+KG VPG +    + VR + K  V
Sbjct: 181 PEAGVLLIKGAVPG-RDGGLVFVRSAVKKGV 210


>gi|284929561|ref|YP_003422083.1| 50S ribosomal protein L3P [cyanobacterium UCYN-A]
 gi|284810005|gb|ADB95702.1| LSU ribosomal protein L3P [cyanobacterium UCYN-A]
          Length = 212

 Score =  157 bits (396), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 88/200 (44%), Positives = 121/200 (60%), Gaps = 7/200 (3%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT +++ E G  IPVTV+ +  C +   +T D +GY A+Q+G  E K K
Sbjct: 1   MAIGLLGTKLGMTQIFDDETGAAIPVTVMKVGPCTITQIKTSDTDGYNAIQIGYSEVKEK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP--VGSVFSPSYFTVGQLVDVTGMTIG 117
            + KP  G       SP + L E+RV   DD+ P  +G   +   F  G LVDVTG ++G
Sbjct: 61  ALVKPELGHLKKAGASPLRHLKEYRV---DDIQPYQLGETVNVDLFNTGDLVDVTGTSMG 117

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           +GF+G  KRHNF     THG S SHR  GSTG    PGRV+  KKMAG+ G ++VT + L
Sbjct: 118 RGFAGYQKRHNFKRGNMTHG-SKSHRLPGSTGAGTTPGRVYPGKKMAGQYGASKVTTRRL 176

Query: 178 EVVSVDDKRGLILVKGCVPG 197
           +VV +D +  L+L+KG +PG
Sbjct: 177 KVVQIDAECNLLLIKGAIPG 196


>gi|225552448|ref|ZP_03773388.1| ribosomal protein L3 [Borrelia sp. SV1]
 gi|225371446|gb|EEH00876.1| ribosomal protein L3 [Borrelia sp. SV1]
          Length = 206

 Score =  157 bits (396), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 89/209 (42%), Positives = 129/209 (61%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++   G  +PVTV+      ++  +T+D++GY A+  G+ + K   VSK
Sbjct: 3   GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKVSK 62

Query: 64  PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G +  + ++ PK+ + E    K  D    G       F   + VDVTG T GKGF G
Sbjct: 63  PIKGQYKGLKDIEPKRYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRMGGN+ T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D+++  +LVKG VPGA K S+++V+ S K
Sbjct: 179 DEEKRALLVKGAVPGA-KGSFVVVKKSKK 206


>gi|75906914|ref|YP_321210.1| 50S ribosomal protein L3 [Anabaena variabilis ATCC 29413]
 gi|109893410|sp|Q3MFC1|RL3_ANAVT RecName: Full=50S ribosomal protein L3
 gi|75700639|gb|ABA20315.1| LSU ribosomal protein L3P [Anabaena variabilis ATCC 29413]
          Length = 211

 Score =  157 bits (396), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 82/197 (41%), Positives = 120/197 (60%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT +++  G  IPVTV+ +  C V   ++   +GY A+QVG GE K K 
Sbjct: 1   MSVGILGTKLGMTQIFDEAGVAIPVTVVQVGPCVVTQVKSKQTDGYAAIQVGYGEVKPKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P+ G  +  +    + L E+      D   +G       F+ G+LVDV G +IG+GF
Sbjct: 61  LNRPLLGHLAKSSAPALRHLKEYHTDSSSDYA-LGQEIKADIFSAGELVDVIGTSIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KR+NFG    +HG S +HR+ GS G    PGRV+  K+MAGR+GG RVT++ L V+
Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGTRVTIRKLTVI 178

Query: 181 SVDDKRGLILVKGCVPG 197
            VD +R L+L+KG VPG
Sbjct: 179 RVDAERNLLLIKGAVPG 195


>gi|306821620|ref|ZP_07455218.1| 50S ribosomal protein L3 [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304550365|gb|EFM38358.1| 50S ribosomal protein L3 [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 207

 Score =  157 bits (396), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/201 (46%), Positives = 116/201 (57%), Gaps = 2/201 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +KLGMT ++  +GR IPVTV+      V   +T + +GY AVQ   GE K KNV+KP
Sbjct: 4   IMGKKLGMTQIFAEDGRLIPVTVIEAGPMVVTQIKTKENDGYEAVQCAYGEIKEKNVNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           ++G F    V  K+ L EF+V    D    G + +   F VG  VD    + GKGF G +
Sbjct: 64  LKGHFKKAGVGSKRHLREFKVANIADYQLAGEI-NVDVFAVGDKVDAVATSKGKGFQGPI 122

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH       THG S  HR  GS G   DP RVFK KK+AG MG  R T+KNLEVV VD 
Sbjct: 123 KRHGQSRGPETHG-SHYHRGPGSMGMCSDPSRVFKGKKLAGHMGFERTTIKNLEVVLVDK 181

Query: 185 KRGLILVKGCVPGAKKNSWIL 205
            + L+LVKG VPG KK   IL
Sbjct: 182 DKNLVLVKGSVPGPKKGLVIL 202


>gi|255038089|ref|YP_003088710.1| 50S ribosomal protein L3 [Dyadobacter fermentans DSM 18053]
 gi|254950845|gb|ACT95545.1| ribosomal protein L3 [Dyadobacter fermentans DSM 18053]
          Length = 206

 Score =  157 bits (396), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 85/206 (41%), Positives = 126/206 (61%), Gaps = 3/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +YN +G+ +  TV+    C V   R+ +K+GY A+Q+G GE K KN S
Sbjct: 2   SGLIGKKIGMTSLYNADGQALACTVIQAGPCVVTQVRSEEKDGYKAIQLGFGEKKEKNTS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +P+ G F   N +PK+KL EF+  + +  L   S+     F  G+ VDV G   G+GF G
Sbjct: 62  QPLIGHFKKANTTPKQKLVEFKEFEVEHELGT-SLSVQDIFEEGEFVDVVGSAKGRGFQG 120

Query: 123 AMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG+   THG     R  GS G    P RVFK  +M GRMG NRV ++NL ++ 
Sbjct: 121 VVKRHGFGGVGGQTHGQHNRARHPGSIGACSFPSRVFKGIRMGGRMGNNRVKIQNLRILK 180

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ +++V G VPG+ KNS++++ 
Sbjct: 181 VIPEQNILVVSGSVPGS-KNSFLIIE 205


>gi|291547982|emb|CBL21090.1| 50S ribosomal protein L3, bacterial [Ruminococcus sp. SR1/5]
          Length = 210

 Score =  157 bits (396), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 124/212 (58%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G  IPVTVL    C V   +T + +GY +VQVG GE + K 
Sbjct: 1   MKKAILATKVGMTQIFNEDGMLIPVTVLQAGPCVVTQVKTEENDGYTSVQVGFGEIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G F    V+ K+ + EFR     +   VG       F  G  +D T ++ GKGF
Sbjct: 61  VNKPEKGHFDKAGVAVKRFVKEFRFDNAGE-YEVGQEIKADIFAAGDHIDATAVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G   DP +VFK K M G MG  +VTV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKHMPGHMGHVQVTVQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  L+LVKG VPG KK S + ++++ KS
Sbjct: 179 RVDTENNLLLVKGAVPGPKK-SLVTIKETVKS 209


>gi|322410858|gb|EFY01766.1| 50S ribosomal protein L3 [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 208

 Score =  157 bits (396), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/213 (43%), Positives = 132/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTETGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VGS  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSEITVDTFVAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK++AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTIQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207


>gi|258591316|emb|CBE67615.1| 50S ribosomal subunit protein L3 [NC10 bacterium 'Dutch sediment']
          Length = 210

 Score =  157 bits (396), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 85/199 (42%), Positives = 121/199 (60%), Gaps = 3/199 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA-GEAKVK 59
           M  G++ +K+GMT ++   G  +PVT++    C +V  RT   +GY AVQ+G   E K +
Sbjct: 1   MGIGLLGKKVGMTQLFGESGNAVPVTIIEAGPCPIVQLRTSSTDGYEAVQIGYRAERKTR 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQ-KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
            ++KP++G F    V+P+K L EFR++ +D     VG + +   F  G+ V VTG+T GK
Sbjct: 61  RIAKPLKGHFDKAKVTPQKYLREFRLKTQDSSKYTVGEILTVGLFEAGEKVQVTGITKGK 120

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G +KR  + G   THG S+ HR+ GS G    P RVFK   M GRMG +R TVK L+
Sbjct: 121 GFQGGVKRWGYLGGPETHG-SMFHRAPGSIGASSFPSRVFKGHHMPGRMGTDRATVKGLQ 179

Query: 179 VVSVDDKRGLILVKGCVPG 197
           VV +  ++ L+LVKG VPG
Sbjct: 180 VVKILPEQNLVLVKGAVPG 198


>gi|187734815|ref|YP_001876927.1| ribosomal protein L3 [Akkermansia muciniphila ATCC BAA-835]
 gi|226725123|sp|B2UMU0|RL3_AKKM8 RecName: Full=50S ribosomal protein L3
 gi|187424867|gb|ACD04146.1| ribosomal protein L3 [Akkermansia muciniphila ATCC BAA-835]
          Length = 211

 Score =  157 bits (396), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/214 (42%), Positives = 129/214 (60%), Gaps = 7/214 (3%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++ +K+GMT +++ E G  +PVTV+ +        +T DK+GY A+QV     K  
Sbjct: 1   MALGLIGKKVGMTRLFDQESGAMVPVTVIDVKGNTFAQIKTEDKDGYNAIQVAFDAQKES 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP--SYFTVGQLVDVTGMTIG 117
            V+KP  G F  + + P K L EFRV+  +  LP      P    F+ GQ VDV G + G
Sbjct: 61  RVAKPQAGHFKKLGIQPTKLLKEFRVEASE--LPAEGAKDPGVDLFSAGQWVDVIGTSKG 118

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF GAM+RHNF G  A HG S+ HR  G  G    PGRV+KN+KM G+MG  + TV+NL
Sbjct: 119 KGFQGAMRRHNFHGSPAAHG-SMMHRRTGGVGGCSTPGRVWKNQKMPGQMGNAKRTVQNL 177

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +VV+V  +  +IL+ G VPGA + S++++R + K
Sbjct: 178 KVVAVRPEDNVILISGAVPGA-RGSYLVIRPAKK 210


>gi|154706152|ref|YP_001425182.1| 50S ribosomal protein L3 [Coxiella burnetii Dugway 5J108-111]
 gi|189042840|sp|A9KD31|RL3_COXBN RecName: Full=50S ribosomal protein L3
 gi|154355438|gb|ABS76900.1| LSU ribosomal protein L3P [Coxiella burnetii Dugway 5J108-111]
          Length = 217

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/212 (41%), Positives = 125/212 (58%), Gaps = 1/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK GMT ++   G  IPVTV+ +   ++   +T++ +GY A QV  G+     
Sbjct: 1   MSIGLIGRKCGMTRIFTETGSSIPVTVVEVIPNRITQVKTVETDGYRAFQVAYGKKSSAR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G +S   V     L EFR+  ++      G       F  GQ+VDV G+T GKG
Sbjct: 61  VNKPLAGHYSKAAVEAGNALREFRLGNEELTEAKAGDELKVDIFKEGQVVDVRGLTRGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +K HNF    ATHG S+SHR+ GS G  Q PGRV+K KKMAG++G    TV++ E+
Sbjct: 121 FAGTVKHHNFRTQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGQLGNVYCTVQSQEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           + VD +R L+L+KG +PGA     I+ + S K
Sbjct: 181 IKVDVERNLLLIKGALPGAPGGEVIITQSSKK 212


>gi|28212175|ref|NP_783119.1| 50S ribosomal protein L3 [Clostridium tetani E88]
 gi|42559625|sp|Q890N9|RL3_CLOTE RecName: Full=50S ribosomal protein L3
 gi|28204619|gb|AAO37056.1| LSU ribosomal protein L3P [Clostridium tetani E88]
          Length = 209

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 86/212 (40%), Positives = 128/212 (60%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ RKLGMT +++   R +PVTV+    C VV  ++++K+GY A+QVG GE + K 
Sbjct: 1   MKKAIIGRKLGMTQIFDENNRVVPVTVVEAGPCTVVQKKSVEKDGYEAIQVGYGEIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F    V   + L EF+++   +   VG       F  G+ +DVTG + GKG+
Sbjct: 61  VNKPLKGHFEKAGVGLSRMLREFKLENVSE-YQVGQEIKVDIFEAGEKIDVTGTSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR N      +HG S  HR+ GS G    P R FKNK+MAG MG  + TV NLEVV
Sbjct: 120 QGIIKRWNAHRGPMSHG-SKFHRAVGSMGAASYPARTFKNKRMAGHMGNVKSTVLNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
               ++ LIL+KG +PG  K  ++++R+S K+
Sbjct: 179 KTIPEKNLILIKGGIPGPNK-GYVIIRNSIKA 209


>gi|3915827|sp|P94267|RL3_BORBU RecName: Full=50S ribosomal protein L3
          Length = 206

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 89/209 (42%), Positives = 129/209 (61%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++   G  +PVTV+      ++  +T+D++GY A+  G+ + K   VSK
Sbjct: 3   GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKVSK 62

Query: 64  PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G + S+ ++ PK+ + E    K  D    G       F   + VDVTG T GKGF G
Sbjct: 63  PIKGQYKSLKDIEPKRYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRM GN+ T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMAGNQQTIQNLEVVLI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D+++  +LVKG VPGA K S+++V+ S K
Sbjct: 179 DEEKRALLVKGAVPGA-KGSFVVVKKSKK 206


>gi|225020386|ref|ZP_03709578.1| hypothetical protein CORMATOL_00393 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305680123|ref|ZP_07402933.1| 50S ribosomal protein L3 [Corynebacterium matruchotii ATCC 14266]
 gi|224946775|gb|EEG27984.1| hypothetical protein CORMATOL_00393 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305660743|gb|EFM50240.1| 50S ribosomal protein L3 [Corynebacterium matruchotii ATCC 14266]
          Length = 218

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 82/196 (41%), Positives = 117/196 (59%), Gaps = 5/196 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT +++     +PVTV+    C +   RT + +GY A+Q+  G+   + V K
Sbjct: 8   GLLGKKLGMTQIFDENNHVVPVTVVEAGPCVITQIRTQETDGYTAIQIAYGDIDPRKVKK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           P  G F+   V+P++ + E R+   DD+    +G   + + F     VDVTG+T GKGF+
Sbjct: 68  PQAGHFNKAGVTPRRHVAEIRM---DDVSGYELGQEITANIFDGITFVDVTGITKGKGFA 124

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F G  A HG   SHR  G  G    PGRVFK K+MAGRMG +RVT +NL++  
Sbjct: 125 GGMKRHGFAGQGAGHGNQASHRRVGGIGACATPGRVFKGKRMAGRMGQDRVTTQNLKIQK 184

Query: 182 VDDKRGLILVKGCVPG 197
           +D    LIL+KG +PG
Sbjct: 185 IDADANLILIKGAIPG 200


>gi|290581289|ref|YP_003485681.1| 50S ribosomal protein L3 [Streptococcus mutans NN2025]
 gi|254998188|dbj|BAH88789.1| 50S ribosomal protein L3 [Streptococcus mutans NN2025]
          Length = 208

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG   +   F  G +VDVTG T GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGQEITVEQFEAGDVVDVTGTTKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    P RVFK K +AGRMGGNRVT++NLE+V
Sbjct: 118 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGNRVTIQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I+++ + K+A
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLIIIKSAVKAA 207


>gi|319796217|ref|YP_004157857.1| 50S ribosomal protein l3 [Variovorax paradoxus EPS]
 gi|315598680|gb|ADU39746.1| 50S ribosomal protein L3 [Variovorax paradoxus EPS]
          Length = 226

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 88/216 (40%), Positives = 128/216 (59%), Gaps = 13/216 (6%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  +PVTV+ + N +V   ++ + +GY+A+QV  G  K   V+K
Sbjct: 8   GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQIKSQETDGYVALQVTFGSRKASRVTK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRV-------QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116
           P  G  +   V   + + EFRV        K   ++  GSVFS     VGQ VDV G +I
Sbjct: 68  PEAGHLAKAGVEAGEIIQEFRVTAETAGQHKAGGVIAAGSVFS-----VGQKVDVQGTSI 122

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           GKGF+G +KRHN    RA+HG S SH   GS G  QDPGRVF  K+M G +G    T +N
Sbjct: 123 GKGFAGTIKRHNMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTKTTQN 182

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           L+V  +D+ R L+L+KG +PG+ K  ++ VR + K+
Sbjct: 183 LDVFRIDEARQLLLIKGAIPGS-KGGFVTVRPAIKA 217


>gi|307244784|ref|ZP_07526885.1| 50S ribosomal protein L3 [Peptostreptococcus stomatis DSM 17678]
 gi|306491882|gb|EFM63934.1| 50S ribosomal protein L3 [Peptostreptococcus stomatis DSM 17678]
          Length = 209

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/212 (43%), Positives = 129/212 (60%), Gaps = 8/212 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V+   G  +PVTV+      +   +T++ +GY A+QVG  +AK K ++K
Sbjct: 3   GILGKKIGMTQVFTENGEVVPVTVVEAGPVSITQIKTVENDGYQAIQVGFVDAKEKALNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           P +G  +   V  K+KL EFRV   D L    VG       F  G+ +DVTG++ GKGF 
Sbjct: 63  PQKGHLAKAGVL-KRKLKEFRV---DSLEGYEVGQELKADIFAEGEKIDVTGISKGKGFQ 118

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRH       THG S  HR  GS G    PGRVFKNKK+AG MG  +VTV+NLEVV 
Sbjct: 119 GPIKRHGQSRGPETHG-SRYHRRPGSMGACSYPGRVFKNKKLAGHMGSVKVTVQNLEVVK 177

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           VD ++ L+L+KG +PGA K S + V+ + K +
Sbjct: 178 VDAEKNLLLIKGAIPGA-KGSVVTVKAAIKGS 208


>gi|222152265|ref|YP_002561440.1| 50S ribosomal protein L3 [Streptococcus uberis 0140J]
 gi|254803695|sp|B9DSV0|RL3_STRU0 RecName: Full=50S ribosomal protein L3
 gi|222113076|emb|CAR40439.1| 50S ribosomal protein L3 [Streptococcus uberis 0140J]
          Length = 208

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/213 (43%), Positives = 132/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VGS  +   F+ G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSEITVESFSAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207


>gi|218131327|ref|ZP_03460131.1| hypothetical protein BACEGG_02938 [Bacteroides eggerthii DSM 20697]
 gi|217986259|gb|EEC52596.1| hypothetical protein BACEGG_02938 [Bacteroides eggerthii DSM 20697]
          Length = 205

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 84/205 (40%), Positives = 126/205 (61%), Gaps = 3/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EG+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYQAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PKK L EF+  + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFEGADFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ + THG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  L+L+KG VPG K +  I+ +
Sbjct: 181 IAEHNLLLIKGSVPGCKGSIVIIEK 205


>gi|300870647|ref|YP_003785518.1| 50S ribosomal protein L3 [Brachyspira pilosicoli 95/1000]
 gi|42559690|sp|Q9FA04|RL3_BRAPL RecName: Full=50S ribosomal protein L3
 gi|11036693|gb|AAG27264.1| putative L3 ribosomal protein [Brachyspira pilosicoli]
 gi|300688346|gb|ADK31017.1| 50S ribosomal protein L3 [Brachyspira pilosicoli 95/1000]
          Length = 218

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 82/195 (42%), Positives = 115/195 (58%), Gaps = 2/195 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT V++  G  I VTV+    C V+  R  +K+GY A+Q+G G  K K++ K
Sbjct: 3   GIIGRKLGMTTVFDETGNAIAVTVVEAGPCTVMQVRDNEKDGYNAIQLGYGAVKEKHLKK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F   N+ PKK L EFR+  D     VG       F  G  +DV+ ++ G+GF+G 
Sbjct: 63  PQIGQFKKANLEPKKYLKEFRLD-DSSAYTVGQELKVDIFQAGDFIDVSSLSKGRGFAGV 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHN+ G   +HG +   R+ GS GC   P RV+K K M G MG    T++NL+VV + 
Sbjct: 122 MKRHNYDGGPMSHGSNFRRRA-GSIGCNSYPARVWKGKGMPGHMGNTLTTIQNLKVVEIR 180

Query: 184 DKRGLILVKGCVPGA 198
            +  LI++KG +PGA
Sbjct: 181 PEDNLIMIKGSIPGA 195


>gi|253701922|ref|YP_003023111.1| 50S ribosomal protein L3 [Geobacter sp. M21]
 gi|259646547|sp|C6E4Q7|RL3_GEOSM RecName: Full=50S ribosomal protein L3
 gi|251776772|gb|ACT19353.1| ribosomal protein L3 [Geobacter sp. M21]
          Length = 211

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT ++  +GRRI VTV+    C VV  +++ K+GY A+QVG G      
Sbjct: 1   MNKGLIGKKLGMTQIFAEDGRRIAVTVVEAGPCVVVQKKSVAKDGYSAIQVGLGAKDASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +    G              E R+  + D   +G V   + F  G LVDVTG +IGKGF
Sbjct: 61  ANAAQIGHCKGAGAGVFTHYRELRMD-NTDAYNLGDVIEAAVFEEGDLVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR  F G R++HG S  HR+ GS GC   P RVFKNKKM G++G  +VTV+ L+VV
Sbjct: 120 AGVIKRWGFKGGRSSHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQLGNEKVTVQRLKVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD    LIL+ G +PG+  N  +L++DS K+
Sbjct: 179 RVDAADNLILLGGAIPGS-ANGVVLIKDSVKA 209


>gi|225027478|ref|ZP_03716670.1| hypothetical protein EUBHAL_01734 [Eubacterium hallii DSM 3353]
 gi|224955213|gb|EEG36422.1| hypothetical protein EUBHAL_01734 [Eubacterium hallii DSM 3353]
          Length = 209

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 88/212 (41%), Positives = 128/212 (60%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++  +G  IPVTVL    C+V   +T++ +GY AVQVG  + + K 
Sbjct: 1   MKKAILATKIGMTQIFAEDGELIPVTVLQAGPCEVTQVKTVENDGYSAVQVGFQDMREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KPM+G F    VS K+ + EF++  D +   +G   +   F  G  VD T ++ GKGF
Sbjct: 61  STKPMKGHFEKAGVSVKRFVREFKLD-DAENYELGQKITVDVFEAGDKVDATAISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH       THG S  HR  GS G   DP +V K KKM G+MG  ++T++NLEVV
Sbjct: 120 QGAIKRHGQHTGPKTHG-SKYHRHAGSNGMASDPSKVMKGKKMPGQMGHVQITIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +D +  +ILVKG VPG KK S + ++ + K+
Sbjct: 179 KIDAENNVILVKGSVPGPKK-SLVTLKAAVKA 209


>gi|312866521|ref|ZP_07726738.1| 50S ribosomal protein L3 [Streptococcus downei F0415]
 gi|311097952|gb|EFQ56179.1| 50S ribosomal protein L3 [Streptococcus downei F0415]
          Length = 208

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/213 (44%), Positives = 130/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VGS  +   F  G +VDVTG T GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSELTVEQFEAGDVVDVTGTTKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLE+ 
Sbjct: 118 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIA 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  +  +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVVPEMNVILIKGNVPGAKK-SLITIKTAVKAA 207


>gi|197117323|ref|YP_002137750.1| 50S ribosomal protein L3 [Geobacter bemidjiensis Bem]
 gi|226725180|sp|B5EFQ0|RL3_GEOBB RecName: Full=50S ribosomal protein L3
 gi|197086683|gb|ACH37954.1| ribosomal protein L3 [Geobacter bemidjiensis Bem]
          Length = 211

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT ++  +GRRI VTV+    C VV  +++ K+GY A+QVG G      
Sbjct: 1   MNKGLIGKKLGMTQIFAEDGRRIAVTVVEAGPCVVVQKKSVAKDGYSAIQVGFGAKDASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +    G              E R+  + D   +G V   + F  G LVDVTG +IGKGF
Sbjct: 61  ANAAQVGHCKGAGAGVFTHYRELRMD-NTDAYKLGDVIEAAVFEEGDLVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR  F G R++HG S  HR+ GS GC   P RVFKNKKM G++G  +VTV+ L+VV
Sbjct: 120 AGVIKRWGFKGGRSSHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQLGNEKVTVQRLKVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD    LIL+ G +PG+  N  +L++DS K+
Sbjct: 179 RVDAADNLILLGGAIPGS-ANGVVLIKDSVKA 209


>gi|241765217|ref|ZP_04763200.1| ribosomal protein L3 [Acidovorax delafieldii 2AN]
 gi|241365097|gb|EER59976.1| ribosomal protein L3 [Acidovorax delafieldii 2AN]
          Length = 224

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 86/216 (39%), Positives = 128/216 (59%), Gaps = 13/216 (6%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  +PVTV+ + N +V   +T + +GY+A+QV  G  K   V+K
Sbjct: 8   GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVALQVTFGSRKASRVTK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDD-------LLPVGSVFSPSYFTVGQLVDVTGMTI 116
           P  G  +   V   + + EFRV  +          +PV  VF+     VGQ VDV G +I
Sbjct: 68  PEAGHLAKAGVEAGEIIQEFRVTAETAGKYAAGAAVPVADVFA-----VGQKVDVQGTSI 122

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           GKG++G +KRHN    RA+HG S SH   GS G  QDPGRVF  K+M G +G    T +N
Sbjct: 123 GKGYAGTIKRHNMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTKTTQN 182

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           L+V+ +D+ R L+L+KG +PG+ K  ++ VR + K+
Sbjct: 183 LDVIRIDEARQLLLIKGAIPGS-KGGFVTVRPAVKA 217


>gi|77409988|ref|ZP_00786570.1| ribosomal protein L3 [Streptococcus agalactiae COH1]
 gi|77171404|gb|EAO74691.1| ribosomal protein L3 [Streptococcus agalactiae COH1]
          Length = 208

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+  +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGIFGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  S   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK++AGRMGGNRVTV+NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ ++L+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVVLIKGNVPGAKK-SLITIKSAVKAA 207


>gi|281423839|ref|ZP_06254752.1| 50S ribosomal protein L3 [Prevotella oris F0302]
 gi|299141147|ref|ZP_07034284.1| 50S ribosomal protein L3 [Prevotella oris C735]
 gi|281402066|gb|EFB32897.1| 50S ribosomal protein L3 [Prevotella oris F0302]
 gi|298577107|gb|EFI48976.1| 50S ribosomal protein L3 [Prevotella oris C735]
          Length = 204

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 84/205 (40%), Positives = 124/205 (60%), Gaps = 5/205 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T +K+GY A+Q+G  EAK    SK
Sbjct: 3   GLIGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTEEKDGYKALQLGFEEAKENRTSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           PM G F     +PKK L EF+  ++ +L   G   +   F   + VD+ G + GKGF G 
Sbjct: 63  PMMGTFKKAGTTPKKHLAEFKFDEEHNL---GDTITVELFADAKFVDIVGTSKGKGFQGV 119

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ ++THG     R  GS G    P +VFK  +MAG+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLQVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  L+LVKG V G    S +L++
Sbjct: 180 IPEHNLLLVKGSVAGC-NGSTVLIK 203


>gi|110639535|ref|YP_679744.1| 50S ribosomal protein L3 [Cytophaga hutchinsonii ATCC 33406]
 gi|123163229|sp|Q11QB2|RL3_CYTH3 RecName: Full=50S ribosomal protein L3
 gi|110282216|gb|ABG60402.1| LSU ribosomal protein L3P [Cytophaga hutchinsonii ATCC 33406]
          Length = 206

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 85/206 (41%), Positives = 125/206 (60%), Gaps = 3/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT VY+  G  +P TV+    C +   +T++ +GY AVQ+   + K K+ +
Sbjct: 2   SGIIGKKVGMTSVYDAVGNYVPCTVIEAGPCVITQIKTVETDGYKAVQLAFDDKKEKSTT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    VSPK+KL EF+   +++L    S+ +   F  G  VDV G   G+GF G
Sbjct: 62  KPLLGHFKKAGVSPKRKLVEFK-GFENELTLGQSLAAQDVFVEGDFVDVVGTAKGRGFQG 120

Query: 123 AMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG+   THG     R  GS G    P RVFK  +MAGRMG NRV ++NL+++ 
Sbjct: 121 VVKRHGFGGVGGQTHGQHNRARHAGSIGACSFPARVFKGTRMAGRMGNNRVKIQNLQILK 180

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  +  L++V G VPG+ KNS++L+ 
Sbjct: 181 VYPEHNLLVVSGSVPGS-KNSYVLIE 205


>gi|119511179|ref|ZP_01630296.1| 50S ribosomal protein L3 [Nodularia spumigena CCY9414]
 gi|119464167|gb|EAW45087.1| 50S ribosomal protein L3 [Nodularia spumigena CCY9414]
          Length = 211

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 119/197 (60%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT V++  G  IPVTV+    C V   +T   +GY A+Q+G GE K K 
Sbjct: 1   MSVGILGTKLGMTQVFDEAGVSIPVTVVQAGPCTVTQVKTKQTDGYSAIQLGYGEVKPKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P+ G  +  +    + L E+      D   +G       F+ GQ+VDV G +IG+GF
Sbjct: 61  LNRPLLGHLAKSSAPALRHLNEYHTDSPSDYA-LGQELKADIFSEGQIVDVVGTSIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KR+NFG    +HG S +HR+ GS G    PGRV+  K+MAGR+GG RVT++ L VV
Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGTRVTIRKLTVV 178

Query: 181 SVDDKRGLILVKGCVPG 197
            VD +R L+L+KG +PG
Sbjct: 179 RVDLERNLLLIKGAIPG 195


>gi|289548391|ref|YP_003473379.1| 50S ribosomal protein L3 [Thermocrinis albus DSM 14484]
 gi|289182008|gb|ADC89252.1| 50S ribosomal protein L3 [Thermocrinis albus DSM 14484]
          Length = 234

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/198 (45%), Positives = 121/198 (61%), Gaps = 3/198 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT V+  +G  +PVTV+ ++   VV  R  +K+GY AVQVGA  AK KN
Sbjct: 1   MPIGLIGTKVGMTRVFLKDGTAVPVTVIKIEPNYVVAVRRQEKDGYNAVQVGAFPAKEKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKG 119
           ++KP  G      + P ++L EFRV  D D   VG        F  G+LVDV G++ G+G
Sbjct: 61  LTKPELGHLKKAGLPPLRRLKEFRVD-DPDQYQVGQELRVEQIFQPGELVDVVGISKGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+GAMKR +FGG   +HG    HR+ GS G R DPGRV+K K+MAG  G   + V+ L V
Sbjct: 120 FAGAMKRWDFGGFPKSHG-HRYHRAVGSIGQRTDPGRVWKGKRMAGHWGAETIRVQALLV 178

Query: 180 VSVDDKRGLILVKGCVPG 197
           V V  +  L+LVKG VPG
Sbjct: 179 VDVVPEENLLLVKGSVPG 196


>gi|94985967|ref|YP_605331.1| 50S ribosomal protein L3 [Deinococcus geothermalis DSM 11300]
 gi|122986549|sp|Q1IX72|RL3_DEIGD RecName: Full=50S ribosomal protein L3
 gi|94556248|gb|ABF46162.1| ribosomal protein L3 [Deinococcus geothermalis DSM 11300]
          Length = 207

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/211 (43%), Positives = 120/211 (56%), Gaps = 7/211 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT ++  + R +PVTV+    C VV  +T   +GY AVQ+G      K 
Sbjct: 1   MTKGILGTKIGMTQIWKGD-RAVPVTVVLAGPCPVVQRKTKLTDGYEAVQLGFAPKSEKR 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++P  G F    V+P + L EFR     D  P G   +   F  G+ +D TG + GKG 
Sbjct: 60  VNRPELGHFKKAGVAPMRFLREFR-----DFAPEGDTVNVDIFAEGEKIDATGTSKGKGT 114

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G MKR NF G  A+HG    HR  GS G R+ PGRV+K K+MAG MG  RVTV+NLEVV
Sbjct: 115 QGVMKRWNFAGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGHMGMERVTVQNLEVV 174

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            V     LILVKG +PGA     +++R + K
Sbjct: 175 EVRADENLILVKGAIPGA-NGGLVMLRQAAK 204


>gi|226356897|ref|YP_002786637.1| 50S ribosomal protein L3 [Deinococcus deserti VCD115]
 gi|226318887|gb|ACO46883.1| putative 50S ribosomal protein L3 [Deinococcus deserti VCD115]
          Length = 206

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/195 (45%), Positives = 115/195 (58%), Gaps = 6/195 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  K+GMT ++  + R +PVTV+    C VV  +T   +GY AVQ+G      K V++
Sbjct: 3   GILGTKVGMTQIWKGD-RAVPVTVVLAGPCPVVQRKTSVSDGYEAVQIGFAPKSEKRVNR 61

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    VSP + L EFR     +  P G   S   F  G+ +D TG + GKGF G 
Sbjct: 62  PAAGHFKKYGVSPVRFLREFR-----NFNPDGDTVSVDIFAEGEKIDATGTSKGKGFQGV 116

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR NF G  A+HG    HR  GS G R+ PGRV+K K+MAG MG +R+TV+NLEVV V 
Sbjct: 117 MKRWNFKGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGHMGMDRITVQNLEVVEVR 176

Query: 184 DKRGLILVKGCVPGA 198
               LILVKG +PGA
Sbjct: 177 ADENLILVKGAIPGA 191


>gi|291291685|gb|ADD91676.1| 50S ribosomal protein L3 [Enterococcus faecium]
          Length = 209

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/214 (43%), Positives = 131/214 (61%), Gaps = 8/214 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY A+QVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQVKTMETDGYEAIQVGYQDMREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
            +KP +G  +  N +PK+ + EF   K+ +L    VG   +   F  G ++DVTG T GK
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNVELGEYEVGKEITVDVFQAGDIIDVTGTTKGK 117

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G +KRH        HG S  HR  GS G    P RVFKNK++AGRMGGNRVT++NLE
Sbjct: 118 GFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGP-VTPNRVFKNKRLAGRMGGNRVTIQNLE 175

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VV VD +R +IL+KG VPGAKK S I ++ + K+
Sbjct: 176 VVRVDAERNVILIKGNVPGAKK-SLITIKSAVKA 208


>gi|116628598|ref|YP_821217.1| 50S ribosomal protein L3 [Streptococcus thermophilus LMD-9]
 gi|122266808|sp|Q03IF1|RL3_STRTD RecName: Full=50S ribosomal protein L3
 gi|116101875|gb|ABJ67021.1| LSU ribosomal protein L3P [Streptococcus thermophilus LMD-9]
 gi|312279259|gb|ADQ63916.1| 50S ribosomal protein L3 [Streptococcus thermophilus ND03]
          Length = 208

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VGS  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSEITVDIFEAGDIVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKTA 207


>gi|302379782|ref|ZP_07268266.1| 50S ribosomal protein L3 [Finegoldia magna ACS-171-V-Col3]
 gi|302312370|gb|EFK94367.1| 50S ribosomal protein L3 [Finegoldia magna ACS-171-V-Col3]
          Length = 209

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/208 (43%), Positives = 128/208 (61%), Gaps = 3/208 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT ++N +G  +PVTV+      V   +T +K GY A+QVG  E K K+V++P
Sbjct: 4   ILGKKIGMTQIFNEDGSVVPVTVIEAGPMVVTQIKTKEKEGYNAIQVGYIEKKEKHVNQP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           MRG F    VS KK L EF++  DD+   +G       F  G +VDV G++ GKG  GA+
Sbjct: 64  MRGHFGKAGVSFKKHLREFKIN-DDEQFNLGDEIKLDIFQDGDVVDVIGISKGKGTQGAI 122

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
            RHN+      HG S SHR  G+      P RVFK +K  G+MG +RVTV+NL++V VD+
Sbjct: 123 VRHNYSRGPMGHG-SKSHRVAGARSAGSYPARVFKGRKGFGKMGHDRVTVQNLKIVKVDN 181

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +R L+L+KG VPG  K   + VR++ KS
Sbjct: 182 ERNLLLIKGAVPG-NKGGVVTVREAIKS 208


>gi|187934203|ref|YP_001884473.1| 50S ribosomal protein L3 [Clostridium botulinum B str. Eklund 17B]
 gi|188590013|ref|YP_001919672.1| 50S ribosomal protein L3 [Clostridium botulinum E3 str. Alaska E43]
 gi|251780648|ref|ZP_04823568.1| 50S ribosomal protein L3 [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|226725151|sp|B2UYB0|RL3_CLOBA RecName: Full=50S ribosomal protein L3
 gi|226725152|sp|B2TIH5|RL3_CLOBB RecName: Full=50S ribosomal protein L3
 gi|187722356|gb|ACD23577.1| 50S ribosomal protein L3 [Clostridium botulinum B str. Eklund 17B]
 gi|188500294|gb|ACD53430.1| 50S ribosomal protein L3 [Clostridium botulinum E3 str. Alaska E43]
 gi|243084963|gb|EES50853.1| 50S ribosomal protein L3 [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 209

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 88/212 (41%), Positives = 129/212 (60%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT ++N  G+ IPVTV+    C VV  +T++K+GY A+QVG G+ + K 
Sbjct: 1   MKKAIMGKKIGMTQIFNEAGKVIPVTVVEAGPCVVVQKKTVEKDGYEAIQVGFGDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G F    V  K+ L EFR++ D     VG       F +G  +DV+G++ GKGF
Sbjct: 61  VNKPAKGHFEKAGVVLKRTLKEFRLE-DVSQYEVGQEIKADVFEIGDKIDVSGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR N      THG S   R+ GS G   DP R FKNK+M G MG    TV NLEVV
Sbjct: 120 QGVIKRWNQQRGPMTHG-SKFKRAPGSMGASSDPSRTFKNKRMPGHMGCVNTTVMNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ L+L+KG +PG  K + +++R++ K+
Sbjct: 179 KVIAEKNLLLIKGGIPGPNKGT-VVIRNAVKA 209


>gi|78189807|ref|YP_380145.1| 50S ribosomal protein L3 [Chlorobium chlorochromatii CaD3]
 gi|109893419|sp|Q3APH3|RL3_CHLCH RecName: Full=50S ribosomal protein L3
 gi|78172006|gb|ABB29102.1| LSU ribosomal protein L3P [Chlorobium chlorochromatii CaD3]
          Length = 209

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 88/207 (42%), Positives = 123/207 (59%), Gaps = 1/207 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT ++N +   +  TV+   +C V   +  DK GY A QV  GE K + VSKP
Sbjct: 4   ILGKKIGMTRLFNEKREAVSCTVIEAGSCFVTQIKRTDKEGYDAYQVSYGERKEQKVSKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           ++G +    V+P   L EF   + +  L VGS  S   F VG+ V+V G++ GKGF+G +
Sbjct: 64  LQGHYKKAGVTPGYTLVEFSFAELNQELAVGSQVSVEGFNVGEKVNVLGVSKGKGFAGVV 123

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR+NFGG   THG S   R+ GS G   DP RVFK  +MAGR G   +TVKNLE+  V  
Sbjct: 124 KRYNFGGGSRTHGQSDRLRAPGSVGGSSDPSRVFKGTRMAGRKGSANITVKNLEIFKVMP 183

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
           +  LI+VKG +PG   NS++ +  S K
Sbjct: 184 ESNLIVVKGSIPGP-NNSYVKIISSKK 209


>gi|326792607|ref|YP_004310428.1| 50S ribosomal protein L3 [Clostridium lentocellum DSM 5427]
 gi|326543371|gb|ADZ85230.1| 50S ribosomal protein L3 [Clostridium lentocellum DSM 5427]
          Length = 209

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 123/212 (58%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT +++     IPVTVL    C V   +T++ +GY A+QVG GE K K+
Sbjct: 1   MKKAILGKKIGMTQIFDENANLIPVTVLEAGPCVVTQKKTMENDGYEAIQVGFGEVKSKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V KP+ G F+   V  KK L EFR++ D     VG+      F  G  VDV G + GKG+
Sbjct: 61  VIKPVAGHFAKAGVEAKKFLKEFRLE-DTSAYEVGTEIKADAFAAGDKVDVVGTSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+K++        HG S SHR  GS G    PGRV K K +   MG  +VTV+NLEV 
Sbjct: 120 QGAIKKYGQSRGPMGHG-SKSHRVAGSMGAATSPGRVMKGKGLPSHMGCVQVTVQNLEVA 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  + LIL+KG VPG  K + I ++DS K+
Sbjct: 179 RVDADKNLILIKGAVPGP-KGTIITIKDSCKA 209


>gi|291280148|ref|YP_003496983.1| 50S ribosomal protein L3 [Deferribacter desulfuricans SSM1]
 gi|290754850|dbj|BAI81227.1| 50S ribosomal protein L3 [Deferribacter desulfuricans SSM1]
          Length = 214

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/212 (46%), Positives = 127/212 (59%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVK 59
           M SG++ +K+GMT V+  EG  IPVTVL +  C VV  +  +K+GY A+Q+G  +  K+K
Sbjct: 1   MLSGLLGKKIGMTQVFTSEGLVIPVTVLQVGPCVVVQKKVKEKDGYNALQIGFEKVTKLK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            V+KPM G F   NV P K L E +V   D+    G   +   F  G  VDV G++ GKG
Sbjct: 61  KVNKPMLGHFKKHNVEPLKYLKEVKVDNPDEFNE-GQEITVEIFNEGDFVDVQGISKGKG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKRH F G  A+HG +  HR+ GS G  + PG   K +KM GRMGG +VTV  LEV
Sbjct: 120 FQGVMKRHGFAGGPASHGSNF-HRAPGSVGMCEFPGETPKGRKMPGRMGGEKVTVMGLEV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V V   + L+LVKG VPG   NS + VR + K
Sbjct: 179 VKVIPDKNLVLVKGAVPG-HNNSLVYVRKAVK 209


>gi|148244329|ref|YP_001219023.1| 50S ribosomal protein L3 [Candidatus Vesicomyosocius okutanii HA]
 gi|226730587|sp|A5CXK4|RL3_VESOH RecName: Full=50S ribosomal protein L3
 gi|146326156|dbj|BAF61299.1| 50S ribosomal protein L3 [Candidatus Vesicomyosocius okutanii HA]
          Length = 241

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/207 (42%), Positives = 130/207 (62%), Gaps = 9/207 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG------ 54
           M   +V +K+GMT + + +G  +PV+V+ ++  ++V  RT+D +GY A+QV  G      
Sbjct: 1   MAIDLVGQKIGMTRLISDDGSIMPVSVIKIEPNRIVQTRTIDIDGYRAIQVTTGKKVNKK 60

Query: 55  -EAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113
            EAKV+ +S  ++G ++  +      L+EF+++  D+ +   +    S F  G  VDV G
Sbjct: 61  GEAKVRRISAAIKGHYAKASQEIGLGLWEFKLE--DNEITNATSIDISLFGAGHYVDVIG 118

Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
            + GKGF G +K HNF    ATHG SISHR+ GSTG  Q+PGRVFK KKMAG MG  +VT
Sbjct: 119 KSKGKGFQGGVKLHNFQMQDATHGNSISHRAIGSTGQCQEPGRVFKGKKMAGHMGNKQVT 178

Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKK 200
            + L+VV VD ++ +ILVKG +PGA K
Sbjct: 179 QECLKVVKVDIEKSVILVKGSIPGAIK 205


>gi|329962267|ref|ZP_08300273.1| 50S ribosomal protein L3 [Bacteroides fluxus YIT 12057]
 gi|328530375|gb|EGF57252.1| 50S ribosomal protein L3 [Bacteroides fluxus YIT 12057]
          Length = 205

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 84/205 (40%), Positives = 126/205 (61%), Gaps = 3/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EG+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYEAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PKK L EF+  + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFNDAAFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ + THG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  L+L+KG VPG K +  I+ +
Sbjct: 181 IAEHNLLLIKGSVPGCKGSIVIIEK 205


>gi|114567841|ref|YP_754995.1| 50S ribosomal protein L3 [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122317284|sp|Q0AUI0|RL3_SYNWW RecName: Full=50S ribosomal protein L3
 gi|114338776|gb|ABI69624.1| LSU ribosomal protein L3P [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 212

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 85/211 (40%), Positives = 127/211 (60%), Gaps = 4/211 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           +  ++  K+GMT +++   + +PV+++    C V+  + ++ +GY ++QVG    K K  
Sbjct: 5   KKAIMGIKIGMTQIFDENDKAVPVSIIEAGPCTVLQKKKVESDGYESIQVGFYNLKEKLA 64

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP RG F   NV P + + EFR+   DD   VG   +   FT G LVDV G + GKGF+
Sbjct: 65  NKPARGHFKKANVKPLRYIKEFRIDNVDD-YDVGQEITADIFTTGDLVDVIGTSKGKGFA 123

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNF      HG S  HR  GS G +  P RVFK +K+ GR+GG RVTV+ L+VV 
Sbjct: 124 GGVKRHNFARGSMGHG-SKYHRRPGSLGAK-GPARVFKGRKLPGRLGGERVTVQGLKVVK 181

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V   R LIL+KG +PG K+  ++++++S K 
Sbjct: 182 VYPDRNLILIKGSIPGPKR-GFVIIKNSVKE 211


>gi|256819982|ref|YP_003141261.1| 50S ribosomal protein L3 [Capnocytophaga ochracea DSM 7271]
 gi|315225401|ref|ZP_07867215.1| 50S ribosomal protein L3 [Capnocytophaga ochracea F0287]
 gi|256581565|gb|ACU92700.1| ribosomal protein L3 [Capnocytophaga ochracea DSM 7271]
 gi|314944674|gb|EFS96709.1| 50S ribosomal protein L3 [Capnocytophaga ochracea F0287]
          Length = 205

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 83/205 (40%), Positives = 127/205 (61%), Gaps = 4/205 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP T++    C V   RT + +GY A+Q+G  +   K  +
Sbjct: 2   SGLIGKKVGMTSIFDENGKNIPCTIIEAGPCVVTQVRTKEVDGYDALQLGFDDKAEKRAT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F     S KKK+ EF  Q  +D   +G   +  +FT G+ VD+TG++ GKGF G
Sbjct: 62  KAELGHFKKAGTSVKKKVVEF--QGFEDNYKLGDTITVDFFTEGEFVDITGVSKGKGFQG 119

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            ++RH FGG+ + THG     R+ GS G    P RVFK  +MAGRMG  +VTV+NL+V+ 
Sbjct: 120 VVRRHGFGGVGQTTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           V  ++ L++VKGC+PG  KN+++ +
Sbjct: 180 VVAEKNLLVVKGCIPG-HKNAYVTI 203


>gi|167764372|ref|ZP_02436497.1| hypothetical protein BACSTE_02756 [Bacteroides stercoris ATCC
           43183]
 gi|167697777|gb|EDS14356.1| hypothetical protein BACSTE_02756 [Bacteroides stercoris ATCC
           43183]
          Length = 205

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 84/205 (40%), Positives = 126/205 (61%), Gaps = 3/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EG+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYQAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PKK L EF+  + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFEGADYVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ + THG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  L+L+KG VPG K +  I+ +
Sbjct: 181 IAEHNLLLIKGSVPGCKGSIVIIEK 205


>gi|160888399|ref|ZP_02069402.1| hypothetical protein BACUNI_00812 [Bacteroides uniformis ATCC 8492]
 gi|270294752|ref|ZP_06200953.1| 50S ribosomal protein L3 [Bacteroides sp. D20]
 gi|317477751|ref|ZP_07936944.1| 50S ribosomal protein L3 [Bacteroides sp. 4_1_36]
 gi|156862076|gb|EDO55507.1| hypothetical protein BACUNI_00812 [Bacteroides uniformis ATCC 8492]
 gi|270273999|gb|EFA19860.1| 50S ribosomal protein L3 [Bacteroides sp. D20]
 gi|316906096|gb|EFV27857.1| 50S ribosomal protein L3 [Bacteroides sp. 4_1_36]
          Length = 205

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 84/205 (40%), Positives = 126/205 (61%), Gaps = 3/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EG+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYEAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PKK L EF+  + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFNDATFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ + THG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  L+L+KG VPG K +  I+ +
Sbjct: 181 IAEHNLLLIKGSVPGCKGSIVIIEK 205


>gi|227550720|ref|ZP_03980769.1| 50S ribosomal protein L3 [Enterococcus faecium TX1330]
 gi|257878725|ref|ZP_05658378.1| ribosomal protein L3 [Enterococcus faecium 1,230,933]
 gi|257881366|ref|ZP_05661019.1| ribosomal protein L3 [Enterococcus faecium 1,231,502]
 gi|257885634|ref|ZP_05665287.1| ribosomal protein L3 [Enterococcus faecium 1,231,501]
 gi|257888021|ref|ZP_05667674.1| ribosomal protein L3 [Enterococcus faecium 1,141,733]
 gi|257890584|ref|ZP_05670237.1| ribosomal protein L3 [Enterococcus faecium 1,231,410]
 gi|257893174|ref|ZP_05672827.1| ribosomal protein L3 [Enterococcus faecium 1,231,408]
 gi|257896360|ref|ZP_05676013.1| ribosomal protein L3 [Enterococcus faecium Com12]
 gi|257899334|ref|ZP_05678987.1| ribosomal protein L3 [Enterococcus faecium Com15]
 gi|258615211|ref|ZP_05712981.1| 50S ribosomal protein L3 [Enterococcus faecium DO]
 gi|260558287|ref|ZP_05830483.1| ribosomal protein L3 [Enterococcus faecium C68]
 gi|261206993|ref|ZP_05921682.1| ribosomal protein L3 [Enterococcus faecium TC 6]
 gi|289565372|ref|ZP_06445822.1| 50S ribosomal protein L3 [Enterococcus faecium D344SRF]
 gi|293379446|ref|ZP_06625590.1| 50S ribosomal protein L3 [Enterococcus faecium PC4.1]
 gi|293562946|ref|ZP_06677413.1| ribosomal protein L3 [Enterococcus faecium E1162]
 gi|293567931|ref|ZP_06679272.1| ribosomal protein L3 [Enterococcus faecium E1071]
 gi|293570684|ref|ZP_06681734.1| ribosomal protein L3 [Enterococcus faecium E980]
 gi|294615393|ref|ZP_06695266.1| ribosomal protein L3 [Enterococcus faecium E1636]
 gi|294618320|ref|ZP_06697901.1| ribosomal protein L3 [Enterococcus faecium E1679]
 gi|294621078|ref|ZP_06700269.1| ribosomal protein L3 [Enterococcus faecium U0317]
 gi|314937608|ref|ZP_07844934.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133a04]
 gi|314942893|ref|ZP_07849706.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133C]
 gi|314947971|ref|ZP_07851375.1| 50S ribosomal protein L3 [Enterococcus faecium TX0082]
 gi|314950888|ref|ZP_07853957.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133A]
 gi|314991464|ref|ZP_07856941.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133B]
 gi|314995015|ref|ZP_07860135.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133a01]
 gi|227180181|gb|EEI61153.1| 50S ribosomal protein L3 [Enterococcus faecium TX1330]
 gi|257812953|gb|EEV41711.1| ribosomal protein L3 [Enterococcus faecium 1,230,933]
 gi|257817024|gb|EEV44352.1| ribosomal protein L3 [Enterococcus faecium 1,231,502]
 gi|257821490|gb|EEV48620.1| ribosomal protein L3 [Enterococcus faecium 1,231,501]
 gi|257824075|gb|EEV51007.1| ribosomal protein L3 [Enterococcus faecium 1,141,733]
 gi|257826944|gb|EEV53570.1| ribosomal protein L3 [Enterococcus faecium 1,231,410]
 gi|257829553|gb|EEV56160.1| ribosomal protein L3 [Enterococcus faecium 1,231,408]
 gi|257832925|gb|EEV59346.1| ribosomal protein L3 [Enterococcus faecium Com12]
 gi|257837246|gb|EEV62320.1| ribosomal protein L3 [Enterococcus faecium Com15]
 gi|260075461|gb|EEW63767.1| ribosomal protein L3 [Enterococcus faecium C68]
 gi|260078621|gb|EEW66323.1| ribosomal protein L3 [Enterococcus faecium TC 6]
 gi|289162862|gb|EFD10712.1| 50S ribosomal protein L3 [Enterococcus faecium D344SRF]
 gi|291589516|gb|EFF21323.1| ribosomal protein L3 [Enterococcus faecium E1071]
 gi|291591767|gb|EFF23403.1| ribosomal protein L3 [Enterococcus faecium E1636]
 gi|291595414|gb|EFF26726.1| ribosomal protein L3 [Enterococcus faecium E1679]
 gi|291599314|gb|EFF30340.1| ribosomal protein L3 [Enterococcus faecium U0317]
 gi|291605072|gb|EFF34539.1| ribosomal protein L3 [Enterococcus faecium E1162]
 gi|291609156|gb|EFF38428.1| ribosomal protein L3 [Enterococcus faecium E980]
 gi|292641969|gb|EFF60135.1| 50S ribosomal protein L3 [Enterococcus faecium PC4.1]
 gi|313590741|gb|EFR69586.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133a01]
 gi|313593944|gb|EFR72789.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133B]
 gi|313596897|gb|EFR75742.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133A]
 gi|313598365|gb|EFR77210.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133C]
 gi|313642985|gb|EFS07565.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133a04]
 gi|313645569|gb|EFS10149.1| 50S ribosomal protein L3 [Enterococcus faecium TX0082]
          Length = 209

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/214 (43%), Positives = 131/214 (61%), Gaps = 8/214 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY A+QVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQVKTMETDGYEAIQVGYQDMREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
            +KP +G  +  N +PK+ + EF   K+ +L    VG   +   F  G ++DVTG T GK
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNVELGEYEVGKEITVDVFQAGDIIDVTGTTKGK 117

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G +KRH        HG S  HR  GS G    P RVFKNK++AGRMGGNRVT++NLE
Sbjct: 118 GFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTIQNLE 175

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VV VD +R +IL+KG VPGAKK S I ++ + K+
Sbjct: 176 VVRVDAERNVILIKGNVPGAKK-SLITIKSAVKA 208


>gi|213962845|ref|ZP_03391105.1| 50S ribosomal protein L3 [Capnocytophaga sputigena Capno]
 gi|213954502|gb|EEB65824.1| 50S ribosomal protein L3 [Capnocytophaga sputigena Capno]
          Length = 225

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 83/205 (40%), Positives = 127/205 (61%), Gaps = 4/205 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP T++    C V   RT + +GY A+Q+G  +   K  +
Sbjct: 22  SGLIGKKVGMTSIFDENGKNIPCTIIEAGPCVVTQVRTKEVDGYDALQLGFDDKAEKRAT 81

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F     S KKK+ EF  Q  +D   +G   +  +FT G+ VD+TG++ GKGF G
Sbjct: 82  KAELGHFKKAGTSVKKKVVEF--QGFEDNYKLGDTITVDFFTEGEFVDITGVSKGKGFQG 139

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            ++RH FGG+ + THG     R+ GS G    P RVFK  +MAGRMG  +VTV+NL+V+ 
Sbjct: 140 VVRRHGFGGVGQTTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVLK 199

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           V  ++ L++VKGC+PG  KN+++ +
Sbjct: 200 VVAEKNLLVVKGCIPG-HKNAYVTI 223


>gi|319900924|ref|YP_004160652.1| LSU ribosomal protein L3P [Bacteroides helcogenes P 36-108]
 gi|319415955|gb|ADV43066.1| LSU ribosomal protein L3P [Bacteroides helcogenes P 36-108]
          Length = 205

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 84/205 (40%), Positives = 126/205 (61%), Gaps = 3/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EG+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PKK L EF+  + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFNDATFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ + THG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  L+L+KG VPG K +  I+ +
Sbjct: 181 IAEHNLLLIKGSVPGCKGSIVIIEK 205


>gi|317968817|ref|ZP_07970207.1| 50S ribosomal protein L3 [Synechococcus sp. CB0205]
          Length = 215

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 86/197 (43%), Positives = 121/197 (61%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++ EGR IPVTV+    C++   +T   +GY AVQ+G G+ + K 
Sbjct: 1   MSIGILGKKLGMSQFFDDEGRAIPVTVIEAGPCRITQLKTDSTDGYTAVQLGFGDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKP +G  +       + L E+RV   D  L +G   + + F  GQ VDV+G TIG+GF
Sbjct: 61  VSKPAKGHLAKSGDELLRHLKEYRVDSVDG-LELGGDVTVAAFEAGQKVDVSGDTIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     THG S +HR  GSTG    PGRV+  K+MAGR GG ++T + L ++
Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRVYPGKRMAGRYGGKQITTRGLTIL 178

Query: 181 SVDDKRGLILVKGCVPG 197
            VD +R L++VKG VPG
Sbjct: 179 KVDAERNLLVVKGSVPG 195


>gi|303230114|ref|ZP_07316883.1| 50S ribosomal protein L3 [Veillonella atypica ACS-134-V-Col7a]
 gi|303231226|ref|ZP_07317964.1| 50S ribosomal protein L3 [Veillonella atypica ACS-049-V-Sch6]
 gi|302514133|gb|EFL56137.1| 50S ribosomal protein L3 [Veillonella atypica ACS-049-V-Sch6]
 gi|302515175|gb|EFL57148.1| 50S ribosomal protein L3 [Veillonella atypica ACS-134-V-Col7a]
          Length = 213

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/213 (46%), Positives = 132/213 (61%), Gaps = 5/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ +KLGMT V+  EG+ +PVTV+      VV  +T++ +GY AVQ+G G  K K+
Sbjct: 1   MSKAILGKKLGMTQVFTAEGQLVPVTVVETTPSVVVRVKTVETDGYEAVQIGYGSIKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP++G F    V+P K L E RV    D   VG   +   F  G+LVDV G   GKGF
Sbjct: 61  LTKPVKGQFDKAGVAPVKYLREVRVDSAADYT-VGQTLAADIFAEGELVDVVGTGKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTG--CRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KRHNF     THG S SHR  GS G       G+V+K KK+ G+MGG RVTV+ L 
Sbjct: 120 AGTIKRHNFSRGPETHG-SKSHREPGSIGPMISGGGGKVYKGKKLPGQMGGYRVTVQRLS 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           VV VD +R L+LVKG +PGA K S ++VR++ K
Sbjct: 179 VVKVDAERNLLLVKGGIPGA-KGSLVMVRNTVK 210


>gi|145219061|ref|YP_001129770.1| 50S ribosomal protein L3 [Prosthecochloris vibrioformis DSM 265]
 gi|189042857|sp|A4SCQ9|RL3_PROVI RecName: Full=50S ribosomal protein L3
 gi|145205225|gb|ABP36268.1| LSU ribosomal protein L3P [Chlorobium phaeovibrioides DSM 265]
          Length = 209

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 84/202 (41%), Positives = 119/202 (58%), Gaps = 1/202 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT +YN +   +P T++    C V   ++   +GY A QVG GE K   V+KP
Sbjct: 4   ILGKKIGMTRLYNEKREAVPCTIIQAGPCFVTQVKSAGIDGYDAYQVGIGERKEAKVTKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M G +    V+P     EF     D  L  GS      FT G++V V G++ GKGF+G +
Sbjct: 64  MLGHYKKAGVAPGYMTAEFDTSMFDGELTAGSPVLVESFTEGEIVKVQGVSKGKGFAGVV 123

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHNFGG + THG S   R+ GS G   DP + FK  KM GRMG + +TV+NL+V+ +  
Sbjct: 124 KRHNFGGGQRTHGQSDRLRAPGSIGGASDPSKTFKGTKMGGRMGSDTITVRNLQVIKIMP 183

Query: 185 KRGLILVKGCVPGAKKNSWILV 206
           +  LI+VKG VPG  KNS++ +
Sbjct: 184 ESSLIMVKGSVPGP-KNSYVRI 204


>gi|228478031|ref|ZP_04062642.1| 50S ribosomal protein L3 [Streptococcus salivarius SK126]
 gi|312862472|ref|ZP_07722715.1| 50S ribosomal protein L3 [Streptococcus vestibularis F0396]
 gi|322374045|ref|ZP_08048579.1| 50S ribosomal protein L3 [Streptococcus sp. C150]
 gi|322515867|ref|ZP_08068809.1| 50S ribosomal protein L3 [Streptococcus vestibularis ATCC 49124]
 gi|228250211|gb|EEK09464.1| 50S ribosomal protein L3 [Streptococcus salivarius SK126]
 gi|311102115|gb|EFQ60315.1| 50S ribosomal protein L3 [Streptococcus vestibularis F0396]
 gi|321277011|gb|EFX54082.1| 50S ribosomal protein L3 [Streptococcus sp. C150]
 gi|322125654|gb|EFX96981.1| 50S ribosomal protein L3 [Streptococcus vestibularis ATCC 49124]
          Length = 208

 Score =  155 bits (393), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/213 (44%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VGS  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSEITVDTFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207


>gi|169630900|ref|YP_001704549.1| 50S ribosomal protein L3 [Mycobacterium abscessus ATCC 19977]
 gi|169242867|emb|CAM63895.1| 50S ribosomal protein L3 [Mycobacterium abscessus]
          Length = 205

 Score =  155 bits (393), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 86/204 (42%), Positives = 123/204 (60%), Gaps = 7/204 (3%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V++   R +PVTV+      V   RT +++GY AVQ+  GE   + V+KP+ G F++
Sbjct: 1   MTQVFDDNNRVVPVTVVKAGPNVVTRIRTTEQDGYSAVQLAYGEISPRKVTKPVTGQFAA 60

Query: 72  VNVSPKKKLFEFRVQKDDDL----LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRH 127
             ++P++ L E R+  DD+       VG   +   F+ G  VDVTG + GKGF+G MKRH
Sbjct: 61  AGINPRRHLAELRL--DDEAAAAEYEVGQELTAEIFSDGAYVDVTGTSKGKGFAGTMKRH 118

Query: 128 NFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRG 187
            F G  A+HG    HR  GS G    PGRVFK  +M+GRMG +RVT +NL V  VD + G
Sbjct: 119 GFRGQGASHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGSDRVTTQNLVVHKVDAENG 178

Query: 188 LILVKGCVPGAKKNSWILVRDSFK 211
           ++L+KG +PG +K   ++VR + K
Sbjct: 179 VLLIKGAIPG-RKGGLVVVRTAVK 201


>gi|269798550|ref|YP_003312450.1| ribosomal protein L3 [Veillonella parvula DSM 2008]
 gi|282849864|ref|ZP_06259247.1| 50S ribosomal protein L3 [Veillonella parvula ATCC 17745]
 gi|294792794|ref|ZP_06757941.1| 50S ribosomal protein L3 [Veillonella sp. 6_1_27]
 gi|294794548|ref|ZP_06759684.1| 50S ribosomal protein L3 [Veillonella sp. 3_1_44]
 gi|313893076|ref|ZP_07826653.1| 50S ribosomal protein L3 [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|269095179|gb|ACZ25170.1| ribosomal protein L3 [Veillonella parvula DSM 2008]
 gi|282580301|gb|EFB85701.1| 50S ribosomal protein L3 [Veillonella parvula ATCC 17745]
 gi|294454878|gb|EFG23251.1| 50S ribosomal protein L3 [Veillonella sp. 3_1_44]
 gi|294456693|gb|EFG25056.1| 50S ribosomal protein L3 [Veillonella sp. 6_1_27]
 gi|313442429|gb|EFR60844.1| 50S ribosomal protein L3 [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 213

 Score =  155 bits (393), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/213 (46%), Positives = 132/213 (61%), Gaps = 5/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ +KLGMT V+  EG+ +PVTV+      VV  +T++ +GY AVQ+G G  K K+
Sbjct: 1   MSKAILGKKLGMTQVFTAEGQLVPVTVVETTPSVVVRVKTVETDGYEAVQIGYGSIKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP++G F    V+P K L E RV    D   VG   +   F  G+LVDV G   GKGF
Sbjct: 61  LTKPVKGQFDKAGVAPVKYLREVRVANAADYT-VGQTLAADIFAEGELVDVVGTGKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTG--CRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KRHNF     THG S SHR  GS G       G+V+K KK+ G+MGG RVTV+ L 
Sbjct: 120 AGTIKRHNFSRGPETHG-SKSHREPGSIGPMISGGGGKVYKGKKLPGQMGGYRVTVQRLS 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           VV VD +R L+LVKG +PGA K S ++VR++ K
Sbjct: 179 VVKVDAERNLLLVKGGIPGA-KGSLVMVRNTVK 210


>gi|317485822|ref|ZP_07944686.1| 50S ribosomal protein L3 [Bilophila wadsworthia 3_1_6]
 gi|316922928|gb|EFV44150.1| 50S ribosomal protein L3 [Bilophila wadsworthia 3_1_6]
          Length = 209

 Score =  155 bits (393), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 85/206 (41%), Positives = 123/206 (59%), Gaps = 2/206 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           + G++ RKLGMT ++  +G  + VTV+    C V   +T + +GY A+Q+   EAK K+V
Sbjct: 4   KMGILGRKLGMTRIFAGDGSAVAVTVVQAGPCPVTQVKTAETDGYNALQIAFEEAKEKHV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KPM+G F+    +  +K+ E R+        VG+V +   F  G  + VTG ++GKG+ 
Sbjct: 64  TKPMKGHFAKAGTALYRKVREIRLD-GPAAYEVGAVLTADVFAAGDKIKVTGTSLGKGYQ 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G M+R NF G + THG    HRS GS G    PG VFK +KMAG  G  +VTV+ LE+V 
Sbjct: 123 GVMRRWNFKGSKDTHGCEKVHRSGGSIGNNTFPGHVFKGRKMAGHWGAEQVTVQGLEIVD 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  +  +IL++G VPG  KN  +LVR
Sbjct: 183 VRTEDNVILIRGSVPGP-KNGLVLVR 207


>gi|119358191|ref|YP_912835.1| 50S ribosomal protein L3 [Chlorobium phaeobacteroides DSM 266]
 gi|166233130|sp|A1BJ34|RL3_CHLPD RecName: Full=50S ribosomal protein L3
 gi|119355540|gb|ABL66411.1| LSU ribosomal protein L3P [Chlorobium phaeobacteroides DSM 266]
          Length = 209

 Score =  155 bits (393), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 82/202 (40%), Positives = 122/202 (60%), Gaps = 1/202 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT +YN +   I  T++    C V   +  +K+GY A Q+G GE   K V+KP
Sbjct: 4   ILGKKIGMTRLYNDKREAISCTIIQAGPCFVTQVKHAEKDGYDAYQIGIGERDEKKVNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M G +    V+P  K+ EF   + +  L  G+    S F  G+ ++V G++ GKGF+G +
Sbjct: 64  MLGHYKKAGVTPGYKIAEFSKSEINLELEAGAPLDLSVFKEGEKINVLGVSKGKGFAGVV 123

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHNFGG   THG S   R+ GS G   DP R F+  +MAGRMGG  +TVKNLE++ +  
Sbjct: 124 KRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFRGTRMAGRMGGCNITVKNLEIIRIMP 183

Query: 185 KRGLILVKGCVPGAKKNSWILV 206
           +  L++VKG +PG  KNS++ +
Sbjct: 184 ESNLLVVKGAIPGP-KNSYVKI 204


>gi|319952196|ref|YP_004163463.1| lsu ribosomal protein l3p [Cellulophaga algicola DSM 14237]
 gi|319420856|gb|ADV47965.1| LSU ribosomal protein L3P [Cellulophaga algicola DSM 14237]
          Length = 205

 Score =  155 bits (393), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 86/206 (41%), Positives = 125/206 (60%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+ L  C V   RT + +GY A+Q+G  +   K  +
Sbjct: 2   SGLIGKKVGMTSIFDENGKNIPCTVIELGPCVVTQVRTEEVDGYSALQLGFDDKAEKRAN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F    VSPKKK+ EFR    +    +G       F  G+ VD  G++ GKGF G
Sbjct: 62  KAETGHFKKAGVSPKKKVVEFR--DFEGGYKLGDTIGVDLFVEGEFVDAIGISKGKGFQG 119

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH F G+ +ATHG     R+ GS G    P RVFK  KMAGRMG ++VTV+NL+V+ 
Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSVGAASYPARVFKGMKMAGRMGTDKVTVQNLKVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L+++KGCVPG  KN+++ + 
Sbjct: 180 VVPEKNLLVLKGCVPG-HKNAYVTIE 204


>gi|150020845|ref|YP_001306199.1| 50S ribosomal protein L3 [Thermosipho melanesiensis BI429]
 gi|166234604|sp|A6LLL3|RL3_THEM4 RecName: Full=50S ribosomal protein L3
 gi|149793366|gb|ABR30814.1| ribosomal protein L3 [Thermosipho melanesiensis BI429]
          Length = 205

 Score =  155 bits (393), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/195 (45%), Positives = 119/195 (61%), Gaps = 5/195 (2%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RKLGMT V+ +  + +PVTV+    C VV  +T++ +GY AVQ+G  EAK   V+KP
Sbjct: 4   IIGRKLGMTRVF-VGDKVVPVTVIKAGPCFVVQKKTIETDGYNAVQLGFEEAK--KVNKP 60

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M G F    V+P K L EFRV+ D D   VG       F+ G  +D+TG + G+GF+GAM
Sbjct: 61  MEGVFKKAGVNPLKVLKEFRVE-DPDKFEVGQEIKVDIFSEGDKIDITGWSKGRGFAGAM 119

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR  F G   +HG    HR  GS G   +P R+FK KKM G+ G  RVT+ N E+V +D 
Sbjct: 120 KRWGFRGGPKSHGAKF-HRELGSVGQHSEPARIFKGKKMPGQYGNERVTILNSEIVKIDV 178

Query: 185 KRGLILVKGCVPGAK 199
           +  LI VKG VPGA+
Sbjct: 179 ENNLIAVKGGVPGAR 193


>gi|329116829|ref|ZP_08245546.1| 50S ribosomal protein L3 [Streptococcus parauberis NCFD 2020]
 gi|326907234|gb|EGE54148.1| 50S ribosomal protein L3 [Streptococcus parauberis NCFD 2020]
          Length = 208

 Score =  155 bits (393), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/213 (43%), Positives = 130/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTETGEFIPVTVIEAAANVVLQVKTIETDGYEAVQVGFDDKREIL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VGS  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSEITVDTFVAGDIVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++  IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNAILIKGNVPGAKK-SLITIKSAVKAA 207


>gi|156312295|ref|XP_001617804.1| hypothetical protein NEMVEDRAFT_v1g225779 [Nematostella vectensis]
 gi|156195878|gb|EDO25704.1| predicted protein [Nematostella vectensis]
          Length = 205

 Score =  155 bits (393), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 84/206 (40%), Positives = 128/206 (62%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ RK+GMT +++  G+ IP TV+    C V   RT + +GY A+Q+G  + K K+ +
Sbjct: 2   SGLIGRKIGMTSLFDENGKNIPCTVIEAGPCVVTQVRTEEVDGYNALQLGFDDKKAKSSN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K + G F     + K+K+ EF  Q  ++   +G   +  +F  G+ VDV+G++ GKGF G
Sbjct: 62  KALDGHFKKAGATAKRKVVEF--QGFEEEYKLGDSITVEHFEEGEFVDVSGISKGKGFQG 119

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG+ +ATHG     R+ GS G    P RVFK  +MAGRMGG +V V+NL V+ 
Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGEKVKVQNLRVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V   + L++VKG +PG  KNS++ ++
Sbjct: 180 VVADKNLLVVKGAIPG-HKNSYVTIQ 204


>gi|291166879|gb|EFE28925.1| 50S ribosomal protein L3 [Filifactor alocis ATCC 35896]
          Length = 210

 Score =  155 bits (393), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 88/211 (41%), Positives = 129/211 (61%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+S ++ +K+GMT +++  G  IPVTV+      V   +T + +GY AVQVG GE K K+
Sbjct: 1   MKS-IMGKKIGMTQIFDENGVMIPVTVVEAGPVVVTQIKTEETDGYNAVQVGFGEVKEKH 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+G F+   V+ KK + E R +   +   +        F VG+ +DVTG++ GKGF
Sbjct: 60  VNKPMKGHFAKAGVALKKHVKELRPEDGVENYSLAQEIKVDIFEVGEKIDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G++KRH       THG S  HR+ GS G   DP +V K KK+ G MG  RVT++NLEV 
Sbjct: 120 QGSIKRHGQSRGPETHG-SHYHRAPGSMGSASDPSKVRKGKKLPGHMGHTRVTIQNLEVA 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD ++ LIL+KG +PG KK   ++++ + K
Sbjct: 179 RVDAEKNLILIKGAIPGPKKG-LVVIKTAVK 208


>gi|110004229|emb|CAK98567.1| 50s ribosomal protein l3 [Spiroplasma citri]
          Length = 258

 Score =  155 bits (393), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 131/208 (62%), Gaps = 6/208 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT ++  +GR IPVTV+ ++   V+   T ++NGY A+Q+   + ++  VSK
Sbjct: 3   GILGRKIGMTQIFATDGRLIPVTVVEVEPNVVLRVLTKEQNGYQALQLAVEDKRISLVSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G F   N +PK+ + E R   + D    G +     FT G+ VDVTG + GKGF+G+
Sbjct: 63  PDQGQFKKANTTPKRFVKEIR---NMDGYNPGDIIKADIFTAGEFVDVTGTSKGKGFTGS 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KRHN+      HG S  HR  GS G    P R+ K+KKM G MG  +VT++NLEV+++D
Sbjct: 120 IKRHNYSRGPMGHG-SGYHRGVGSMGAIA-PNRILKSKKMPGHMGTKKVTIQNLEVIAID 177

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            ++  +LVKG +PG KK  +++++++ K
Sbjct: 178 TEKNALLVKGSIPGPKKQ-FVIIKEAIK 204


>gi|55821905|ref|YP_140347.1| 50S ribosomal protein L3 [Streptococcus thermophilus LMG 18311]
 gi|55823821|ref|YP_142262.1| 50S ribosomal protein L3 [Streptococcus thermophilus CNRZ1066]
 gi|81820218|sp|Q5LXR1|RL3_STRT1 RecName: Full=50S ribosomal protein L3
 gi|81820383|sp|Q5M2B3|RL3_STRT2 RecName: Full=50S ribosomal protein L3
 gi|55737890|gb|AAV61532.1| 50S ribosomal protein L3 [Streptococcus thermophilus LMG 18311]
 gi|55739806|gb|AAV63447.1| 50S ribosomal protein L3 [Streptococcus thermophilus CNRZ1066]
          Length = 208

 Score =  155 bits (393), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VGS  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSEITVDIFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207


>gi|148243215|ref|YP_001228372.1| 50S ribosomal protein L3 [Synechococcus sp. RCC307]
 gi|166234603|sp|A5GVW0|RL3_SYNR3 RecName: Full=50S ribosomal protein L3
 gi|147851525|emb|CAK29019.1| 50S ribosomal protein L3 [Synechococcus sp. RCC307]
          Length = 215

 Score =  155 bits (393), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 88/211 (41%), Positives = 127/211 (60%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++ EGR +PVTV+    C++   +T   +GY AVQVG G+ + K 
Sbjct: 1   MSIGILGKKLGMSQFFDDEGRAVPVTVIEAGPCRITQVKTPTNDGYSAVQVGFGDVREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++P +G          + L E+RV   D +  +GS  +   F  GQ VDV+G T+G+GF
Sbjct: 61  VNQPAKGHLKKSGEDLLRHLKEYRVDSTDGV-ELGSSVTVDAFEPGQKVDVSGDTMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRH F     THG S +HR  GSTG    PGR++  K+MAGR GG + TVK L V+
Sbjct: 120 SGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGTKTTVKGLVVL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L++VKG VPG K  + + +R + +
Sbjct: 179 KVDSERNLLVVKGSVPG-KPGALLSIRPAVR 208


>gi|239623347|ref|ZP_04666378.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239522313|gb|EEQ62179.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 226

 Score =  155 bits (393), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 90/211 (42%), Positives = 122/211 (57%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N  G  +PVTVL    C V   +T + +GY AVQVG  + + K 
Sbjct: 16  MKKAILATKVGMTQIFNENGALVPVTVLQAGPCVVTQVKTAENDGYKAVQVGFVDKREKL 75

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKP+RG F    VS K+ + EF+ +  ++   V        F  G  +D T ++ GKGF
Sbjct: 76  VSKPLRGHFDKAGVSYKRYVREFKFENAEEY-SVKDEIKADIFAAGDKIDATAISKGKGF 134

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR+        HG S  HR  GS G    PGRVFK K M G MG  ++TV+NLEVV
Sbjct: 135 QGAIKRYGQHRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGHMGSKKITVQNLEVV 193

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD    LILVKG VPG KK S + ++++ K
Sbjct: 194 KVDTDNNLILVKGAVPGPKK-SLVTIKETVK 223


>gi|1685371|gb|AAB36822.1| ribosomal protein L3 [Borrelia burgdorferi]
          Length = 206

 Score =  155 bits (393), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/209 (42%), Positives = 129/209 (61%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++   G  +PVTV+      ++  +T+D++GY A+  G+ + K   VSK
Sbjct: 3   GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKVSK 62

Query: 64  PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G + S+ ++ PK+ + E    K  D    G       F   + VDVTG T GKGF G
Sbjct: 63  PIKGQYKSLKDIEPKRYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRM GN+ T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMAGNQQTIQNLEVVLI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D+++  +LVKG VPGA K S+++V+ S K
Sbjct: 179 DEEKRALLVKGPVPGA-KGSFVVVKKSKK 206


>gi|24380367|ref|NP_722322.1| 50S ribosomal protein L3 [Streptococcus mutans UA159]
 gi|42559636|sp|Q8DS16|RL3_STRMU RecName: Full=50S ribosomal protein L3
 gi|24378386|gb|AAN59628.1|AE015024_20 50S ribosomal protein L3 [Streptococcus mutans UA159]
          Length = 208

 Score =  155 bits (393), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/213 (44%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  + +PK+ + EF   K+ + L VG   +   F  G +VDVTG T GKGF
Sbjct: 61  SNKPAKGHVAKADTAPKRFIREF---KNIEGLEVGQEITVEQFEAGDVVDVTGTTKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    P RVFK K +AGRMGGNRVTV+NLEVV
Sbjct: 118 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGNRVTVQNLEVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I+++ + K+A
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLIIIKSAVKAA 207


>gi|322418364|ref|YP_004197587.1| 50S ribosomal protein L3 [Geobacter sp. M18]
 gi|320124751|gb|ADW12311.1| 50S ribosomal protein L3 [Geobacter sp. M18]
          Length = 211

 Score =  155 bits (392), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 88/212 (41%), Positives = 125/212 (58%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT ++  +GRRI VTV+    C V+  ++++K+GY A+QVG  +     
Sbjct: 1   MNKGLIGKKLGMTQIFAEDGRRIAVTVVEAGPCVVLQKKSVEKDGYTAIQVGYVQKDAAR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +    G   S          E R+  + D   +G V     F  G LVDVTG +IGKGF
Sbjct: 61  ANAAQVGHCKSAGAGVFTHYRELRMD-NTDAYNLGDVIEAGVFAEGDLVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR  F G R++HG S  HR+ GS GC   P RVFKNKKM G++G  +VTV+ L+VV
Sbjct: 120 AGVIKRWGFKGGRSSHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQLGNEKVTVQRLKVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD    LIL+ G +PG+  N  +L++DS K+
Sbjct: 179 RVDAADNLILLGGAIPGS-ANGVVLIKDSVKA 209


>gi|126657988|ref|ZP_01729140.1| 50S ribosomal protein L3 [Cyanothece sp. CCY0110]
 gi|126620626|gb|EAZ91343.1| 50S ribosomal protein L3 [Cyanothece sp. CCY0110]
          Length = 212

 Score =  155 bits (392), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 84/198 (42%), Positives = 116/198 (58%), Gaps = 3/198 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT ++  E G  IPVTV+    C +   +T + +GY A+Q+G  E + K
Sbjct: 1   MAVGLLGTKLGMTQIFEEESGLAIPVTVVQAGPCTITQIKTAETDGYTAIQIGYLEVREK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           N++KP  G       SP + L E+RV+ D     +G       F  G LVD+ G ++G+G
Sbjct: 61  NLTKPELGHLKKAEASPLRHLKEYRVE-DTASYTLGEAVKADIFNAGDLVDIAGTSMGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G  KRHNF     THG S +HR  GSTG    PGRV+  KKMAG+ G    T ++LEV
Sbjct: 120 FAGYQKRHNFKRGSMTHG-SKNHRLPGSTGAGTTPGRVYPGKKMAGQYGAVTTTTRHLEV 178

Query: 180 VSVDDKRGLILVKGCVPG 197
           V VD +R L+L++G VPG
Sbjct: 179 VKVDAERNLLLIRGAVPG 196


>gi|302344356|ref|YP_003808885.1| 50S ribosomal protein L3 [Desulfarculus baarsii DSM 2075]
 gi|301640969|gb|ADK86291.1| 50S ribosomal protein L3 [Desulfarculus baarsii DSM 2075]
          Length = 207

 Score =  155 bits (392), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 86/197 (43%), Positives = 119/197 (60%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++  EGR + VTVL +  C VV  +T D + Y A+Q+G G  K KN
Sbjct: 1   MLKGLIGKKVGMTRLFLEEGRAVAVTVLEVGPCHVVQIKTEDNDQYNALQLGFGAKKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP  G F    V     L EFRV+   D   VG   +   F +G  V+VTG + G+GF
Sbjct: 61  VNKPTAGHFKKAGVEATSTLREFRVEDVAD-FEVGQTITADMFKMGDSVNVTGRSKGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG +KRHNFGG R THG + +H + GS G   DP RVFK  ++ G  G  R  V+NL++V
Sbjct: 120 SGVVKRHNFGGGRDTHGCT-THDAPGSIGQSADPSRVFKGVRLPGHYGAERKQVRNLKIV 178

Query: 181 SVDDKRGLILVKGCVPG 197
            V  ++ L++V+G VPG
Sbjct: 179 DVRPEQNLVVVRGAVPG 195


>gi|225621028|ref|YP_002722286.1| 50S ribosomal protein L3 [Brachyspira hyodysenteriae WA1]
 gi|254803657|sp|C0QVZ6|RL3_BRAHW RecName: Full=50S ribosomal protein L3
 gi|225215848|gb|ACN84582.1| 50S ribosomal protein L3 [Brachyspira hyodysenteriae WA1]
          Length = 217

 Score =  155 bits (392), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 86/217 (39%), Positives = 124/217 (57%), Gaps = 7/217 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT V++  G  I VTV+    C V+  R  +K+GY A+Q+G G  K K++ K
Sbjct: 3   GIIGKKLGMTTVFDETGNAIAVTVVEAGPCTVMQIRDNEKDGYSAIQLGYGAVKEKHLKK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F   N+ PKK L EFR+  D     VG       F  G  +DV+ ++ G+GF+G 
Sbjct: 63  PQIGQFKKANLEPKKYLKEFRMD-DASSYTVGQELKADIFQAGDFIDVSSLSKGRGFAGV 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHN+ G   +HG +   R+ GS GC   P RV+K K M G MG    T++NL+VV + 
Sbjct: 122 MKRHNYDGGPMSHGSNFRRRA-GSIGCNSYPARVWKGKGMPGHMGNTLTTIQNLKVVEIR 180

Query: 184 DKRGLILVKGCVPGA-----KKNSWILVRDSFKSAVN 215
               LI++KG +PGA     K  S +  R+  K+++N
Sbjct: 181 PDDNLIMIKGAIPGAINSIVKLTSAVKKRNKKKNSMN 217


>gi|150392160|ref|YP_001322209.1| ribosomal protein L3 [Alkaliphilus metalliredigens QYMF]
 gi|189042829|sp|A6TWI2|RL3_ALKMQ RecName: Full=50S ribosomal protein L3
 gi|149952022|gb|ABR50550.1| ribosomal protein L3 [Alkaliphilus metalliredigens QYMF]
          Length = 210

 Score =  155 bits (392), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 85/202 (42%), Positives = 118/202 (58%), Gaps = 2/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT ++N +G   PVTV+ +    V   ++ + +GY +VQVG GE K+KN  K
Sbjct: 3   GLMGRKVGMTQIFNEDGIVTPVTVIEVAENVVTQIKSDETDGYNSVQVGYGEKKIKNTIK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F     +PK+ + EFRV   +     G       F  G  VDVTG++ GKGF G 
Sbjct: 63  PLQGHFEKAGTTPKRTMKEFRVDSTEGFT-AGQELKADLFQAGDKVDVTGISKGKGFQGV 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KRH        HG S  HR  GS G    PGRVFK K + G MG  +VT +NLE+V VD
Sbjct: 122 IKRHGQSRGPMAHG-SRYHRRPGSMGASAYPGRVFKGKNLPGHMGNVQVTAQNLEIVRVD 180

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            ++ L+L+KG VPG KK   ++
Sbjct: 181 LEKNLLLIKGAVPGPKKGVLVI 202


>gi|203284388|ref|YP_002222128.1| 50S ribosomal protein L3 [Borrelia duttonii Ly]
 gi|203287922|ref|YP_002222937.1| 50S ribosomal protein L3 [Borrelia recurrentis A1]
 gi|226725137|sp|B5RM36|RL3_BORDL RecName: Full=50S ribosomal protein L3
 gi|226725139|sp|B5RPI2|RL3_BORRA RecName: Full=50S ribosomal protein L3
 gi|201083831|gb|ACH93422.1| 50S ribosomal protein L3 [Borrelia duttonii Ly]
 gi|201085142|gb|ACH94716.1| 50S ribosomal protein L3 [Borrelia recurrentis A1]
          Length = 209

 Score =  155 bits (392), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 87/212 (41%), Positives = 132/212 (62%), Gaps = 6/212 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V+   G  +PVTV+  +   V+  +T++++GY A+ +G+ + K   VS+
Sbjct: 3   GLIGKKVGMTQVFQSNGIVVPVTVIEFEPNYVIGKKTMERDGYDALIMGSVDLKGSKVSR 62

Query: 64  PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G +  + N+ PK+ + EF+  K  D    G       F   + VD+TG T GKGF G
Sbjct: 63  PIKGQYKKLENIEPKRYVIEFKGLKGYD---AGDEVGLDAFREIKYVDITGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRMGG + T++NLE+V +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGEQQTIQNLEIVFI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D+++  ILVKG VPG  K S+++V+ + K  +
Sbjct: 179 DEEKRAILVKGAVPGV-KGSFVIVKKAKKVGI 209


>gi|253580619|ref|ZP_04857883.1| 50S ribosomal protein L3 [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847990|gb|EES75956.1| 50S ribosomal protein L3 [Ruminococcus sp. 5_1_39BFAA]
          Length = 210

 Score =  155 bits (391), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 124/212 (58%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G+ IPVTVL    C V   +T + +GY AVQVG G+ +   
Sbjct: 1   MKKAILATKVGMTQIFNEDGQLIPVTVLQAGPCVVTQVKTEENDGYEAVQVGFGDIRESL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G F    V+ K+ + EFR     +   VG       F  G  +D T ++ GKGF
Sbjct: 61  VNKPEKGHFDKAGVAVKRFVKEFRFDNAAEYT-VGQEIKADIFADGDHIDATAVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G   DP +VFK K M G MG  +VTV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKHMPGHMGNVQVTVQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  L+LVKG VPG KK S + ++++ KS
Sbjct: 179 RVDTENNLLLVKGAVPGPKK-SLVTIKETVKS 209


>gi|163783906|ref|ZP_02178880.1| ribosomal protein L03 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880827|gb|EDP74357.1| ribosomal protein L03 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 230

 Score =  155 bits (391), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M +G++ +K+GMT ++   G+ IPVTV+ ++   +V  RT +K+GY AV +G GE K K 
Sbjct: 1   MPTGIIGKKIGMTRIFK-NGKAIPVTVIQVEPNYIVGIRTKEKDGYSAVILGTGEKKEKR 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
             KP+   F    + P + L EF +++ +       V     F  G LVDV G + G+GF
Sbjct: 60  TPKPLLKIFEKAGLKPLRVLKEFPLKEGEQPEVGKEVKVEEVFQPGDLVDVAGKSKGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           + AMKR +FGG R +HG S  HR+ GS G   +P RVFK K+MAG  G  RV+V  LEVV
Sbjct: 120 TSAMKRWDFGGFRKSHG-SRYHRAVGSVGAATEPSRVFKGKRMAGHYGNERVSVLGLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            +  ++ +ILVKG VPGA K S++ ++ S
Sbjct: 179 DIIPEKSVILVKGSVPGATK-SYVELKAS 206


>gi|123966973|ref|YP_001012054.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9515]
 gi|166233178|sp|A2BYT6|RL3_PROM5 RecName: Full=50S ribosomal protein L3
 gi|123201339|gb|ABM72947.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9515]
          Length = 217

 Score =  155 bits (391), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 83/207 (40%), Positives = 130/207 (62%), Gaps = 3/207 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +G  +PVT++    C+V   +T   +GY A+Q+G G +K K+
Sbjct: 1   MSIGILGKKLGMSQLFDDDGNAVPVTLIEAGPCRVTQLKTQSLDGYTAIQIGYGVSKDKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SKP +G          K L EF+V+++     +G   + + F VGQ VD++G ++G+GF
Sbjct: 61  LSKPEKGHLLKSGKELLKHLKEFKVEENSSY-EIGKEITVTNFEVGQKVDISGKSMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRH F     +HG S +HR+ GSTG    PGR++  K+MAGR GG ++T K L VV
Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKKITTKGLLVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207
            +DD++ L++VKG VPG K  S + +R
Sbjct: 179 KIDDQKNLLVVKGSVPG-KPGSIVNIR 204


>gi|288904273|ref|YP_003429494.1| ribosomal protein L3 [Streptococcus gallolyticus UCN34]
 gi|306830302|ref|ZP_07463473.1| 50S ribosomal protein L3 [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|320548055|ref|ZP_08042335.1| 50S ribosomal protein L3 [Streptococcus equinus ATCC 9812]
 gi|325977252|ref|YP_004286968.1| 50S ribosomal protein L3 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288730998|emb|CBI12542.1| ribosomal protein L3 [Streptococcus gallolyticus UCN34]
 gi|304427549|gb|EFM30650.1| 50S ribosomal protein L3 [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|320447297|gb|EFW88060.1| 50S ribosomal protein L3 [Streptococcus equinus ATCC 9812]
 gi|325177180|emb|CBZ47224.1| 50S ribosomal protein L3 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 208

 Score =  155 bits (391), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 93/213 (43%), Positives = 130/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG   +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGQEITVDTFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLEVV
Sbjct: 118 QGVIKRHGQARGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207


>gi|16077184|ref|NP_387997.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221307928|ref|ZP_03589775.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221312249|ref|ZP_03594054.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221317183|ref|ZP_03598477.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221321446|ref|ZP_03602740.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|321313787|ref|YP_004206074.1| 50S ribosomal protein L3 [Bacillus subtilis BSn5]
 gi|1710556|sp|P42920|RL3_BACSU RecName: Full=50S ribosomal protein L3; Short=BL3
 gi|1165303|gb|AAC45956.1| L3 [Bacillus subtilis]
 gi|2632383|emb|CAB11892.1| ribosomal protein L3 (BL3) [Bacillus subtilis subsp. subtilis str.
           168]
 gi|291482489|dbj|BAI83564.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. natto BEST195]
 gi|320020061|gb|ADV95047.1| 50S ribosomal protein L3 [Bacillus subtilis BSn5]
          Length = 209

 Score =  155 bits (391), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 92/212 (43%), Positives = 129/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQLGFDDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    +PK+ + E R   + D   VG       F+ G++VDVTG++ GKGF
Sbjct: 61  SNKPEKGHVAKAETAPKRFVKELR-GVEMDAYEVGQEVKVEIFSAGEIVDVTGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH       +HG S  HR  GS G   DP RVFK K + GRMGG ++TV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGP-VDPNRVFKGKLLPGRMGGEQITVQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGAKK S I V+ + KS
Sbjct: 178 KVDAERNLLLIKGNVPGAKK-SLITVKSAVKS 208


>gi|52078609|ref|YP_077400.1| 50S ribosomal protein L3 [Bacillus licheniformis ATCC 14580]
 gi|52783971|ref|YP_089800.1| 50S ribosomal protein L3 [Bacillus licheniformis ATCC 14580]
 gi|319649116|ref|ZP_08003324.1| 50S ribosomal protein L3 [Bacillus sp. BT1B_CT2]
 gi|81825438|sp|Q65PA7|RL3_BACLD RecName: Full=50S ribosomal protein L3
 gi|52001820|gb|AAU21762.1| ribosomal protein L3 (BL3) [Bacillus licheniformis ATCC 14580]
 gi|52346473|gb|AAU39107.1| RplC [Bacillus licheniformis ATCC 14580]
 gi|317388816|gb|EFV69635.1| 50S ribosomal protein L3 [Bacillus sp. BT1B_CT2]
          Length = 209

 Score =  155 bits (391), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 93/212 (43%), Positives = 128/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTSENDGYEAIQIGFDDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    +PK+ + E R   D D   VG       F+ G++VDVTG + GKGF
Sbjct: 61  ANKPEKGHVAKAETAPKRFVKELR-GVDMDAYEVGQEVKVDIFSNGEIVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH       +HG S  HR  GS G   DP RVFK K + GRMGG ++TV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGP-VDPNRVFKGKLLPGRMGGEQITVQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGAKK S + V+ + KS
Sbjct: 178 KVDAERNLLLVKGNVPGAKK-SLVTVKSAVKS 208


>gi|297588191|ref|ZP_06946835.1| 50S ribosomal protein L3 [Finegoldia magna ATCC 53516]
 gi|297574880|gb|EFH93600.1| 50S ribosomal protein L3 [Finegoldia magna ATCC 53516]
          Length = 209

 Score =  155 bits (391), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 89/208 (42%), Positives = 128/208 (61%), Gaps = 3/208 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT ++N +G  +PVTV+      V   +T +K GY A+QVG  E K K+V++P
Sbjct: 4   ILGKKIGMTQIFNEDGSVVPVTVIEAGPMVVTQIKTKEKEGYNAIQVGYIEKKEKHVNQP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           MRG F    VS KK L EF++  DD    +G       F  G +VDV G++ GKG  G++
Sbjct: 64  MRGHFGKAGVSFKKHLQEFKI-GDDQQFNLGDEIKLDIFQDGDVVDVIGISKGKGTQGSI 122

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
            RHN+      HG S SHR  G+      P RVFK +K +G+MG +RVTV+NL++V VD+
Sbjct: 123 VRHNYSRGPMGHG-SKSHRVAGARSAGSYPARVFKGRKGSGKMGHDRVTVQNLKIVKVDN 181

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +R L+L+KG VPG  K   + VR++ KS
Sbjct: 182 ERNLLLIKGAVPG-NKGGVVTVREAIKS 208


>gi|306832547|ref|ZP_07465687.1| 50S ribosomal protein L3 [Streptococcus bovis ATCC 700338]
 gi|304425305|gb|EFM28431.1| 50S ribosomal protein L3 [Streptococcus bovis ATCC 700338]
          Length = 208

 Score =  155 bits (391), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG   + + F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGQEITVNTFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207


>gi|207723095|ref|YP_002253500.1| 50s ribosomal protein l3 [Ralstonia solanacearum IPO1609]
 gi|206588288|emb|CAQ18986.1| 50s ribosomal protein l3 [Ralstonia solanacearum IPO1609]
          Length = 209

 Score =  155 bits (391), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 87/202 (43%), Positives = 120/202 (59%), Gaps = 2/202 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V+  +G  IPVTVL +   +V   +T + +GY AVQV  G  +   V+KP+ G  + 
Sbjct: 1   MTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGSRRASRVTKPLAGHLAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
             V   + + EFR+       L +G       F+ GQ +DV G TIGKG++G +KR+NF 
Sbjct: 61  AGVEAGEIIAEFRIDAAKAAELKLGDTIDVDLFSAGQKIDVQGTTIGKGYAGTIKRYNFS 120

Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
             RA+HG S SH   GS G  QDPGRVF  K+M G MG    TV+NL +V VD +R L+L
Sbjct: 121 SGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVIVRVDAERKLLL 180

Query: 191 VKGCVPGAKKNSWILVRDSFKS 212
           VKG VPGA K+ +++V  + K+
Sbjct: 181 VKGAVPGA-KSGFVVVSPAVKA 201


>gi|329956703|ref|ZP_08297276.1| 50S ribosomal protein L3 [Bacteroides clarus YIT 12056]
 gi|328524075|gb|EGF51151.1| 50S ribosomal protein L3 [Bacteroides clarus YIT 12056]
          Length = 205

 Score =  155 bits (391), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 84/205 (40%), Positives = 126/205 (61%), Gaps = 3/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EG+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYQAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PKK L EF+  + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFEGVDFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ + THG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  L+L+KG VPG K +  I+ +
Sbjct: 181 IAEHNLLLIKGSVPGCKGSIVIIEK 205


>gi|237717399|ref|ZP_04547880.1| 50S ribosomal protein L3 [Bacteroides sp. D1]
 gi|262406164|ref|ZP_06082714.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_22]
 gi|294644059|ref|ZP_06721836.1| 50S ribosomal protein L3 [Bacteroides ovatus SD CC 2a]
 gi|294807315|ref|ZP_06766128.1| 50S ribosomal protein L3 [Bacteroides xylanisolvens SD CC 1b]
 gi|298483064|ref|ZP_07001245.1| 50S ribosomal protein L3 [Bacteroides sp. D22]
 gi|229443382|gb|EEO49173.1| 50S ribosomal protein L3 [Bacteroides sp. D1]
 gi|262357039|gb|EEZ06129.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_22]
 gi|292640583|gb|EFF58824.1| 50S ribosomal protein L3 [Bacteroides ovatus SD CC 2a]
 gi|294445480|gb|EFG14134.1| 50S ribosomal protein L3 [Bacteroides xylanisolvens SD CC 1b]
 gi|295085428|emb|CBK66951.1| LSU ribosomal protein L3P [Bacteroides xylanisolvens XB1A]
 gi|298270808|gb|EFI12388.1| 50S ribosomal protein L3 [Bacteroides sp. D22]
          Length = 205

 Score =  154 bits (390), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 84/205 (40%), Positives = 126/205 (61%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PK+ L EF+  + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKRAGVTPKRHLAEFKEFETE--LNLGDTITVEMFNDASFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ +ATHG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
                L+LVKG +PG  K S +L+ 
Sbjct: 181 IADHNLLLVKGSIPGC-KGSIVLIE 204


>gi|218779762|ref|YP_002431080.1| 50S ribosomal protein L3 [Desulfatibacillum alkenivorans AK-01]
 gi|226725162|sp|B8FET5|RL3_DESAA RecName: Full=50S ribosomal protein L3
 gi|218761146|gb|ACL03612.1| ribosomal protein L3 [Desulfatibacillum alkenivorans AK-01]
          Length = 211

 Score =  154 bits (390), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 87/210 (41%), Positives = 121/210 (57%), Gaps = 2/210 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT +++ +GR IPVTV+    C V   +T DK+GY A+Q+G G  K ++
Sbjct: 1   MSKGILGKKLGMTGLFSSDGRHIPVTVIEAGPCVVTQIKTKDKDGYNALQLGFGPKKERH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP  G F     +    + EF V   ++   +G   S   F VG+ +DV G++ G+GF
Sbjct: 61  TNKPETGHFEKSGGAAYVMVKEFAVDNPEE-FELGQSLSTELFAVGEKIDVAGVSKGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRH FGG R THG     R  GS GC   P +V K KK+ G  G  R TV+NLE+V
Sbjct: 120 AGVMKRHGFGGGRMTHGGRCKRRP-GSIGCSAWPSKVIKGKKLPGHYGVERKTVRNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
            +   + LIL+KG VPGAK     L +  F
Sbjct: 179 DIRADQNLILLKGAVPGAKSGMLELKKLKF 208


>gi|313889584|ref|ZP_07823229.1| 50S ribosomal protein L3 [Streptococcus pseudoporcinus SPIN 20026]
 gi|313122093|gb|EFR45187.1| 50S ribosomal protein L3 [Streptococcus pseudoporcinus SPIN 20026]
          Length = 208

 Score =  154 bits (390), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 92/213 (43%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207


>gi|88807884|ref|ZP_01123395.1| 50S ribosomal protein L3 [Synechococcus sp. WH 7805]
 gi|88787923|gb|EAR19079.1| 50S ribosomal protein L3 [Synechococcus sp. WH 7805]
          Length = 218

 Score =  154 bits (390), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 83/209 (39%), Positives = 127/209 (60%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +G+ +PVT++    C++   +T + +GY AVQ+G GE + K 
Sbjct: 1   MSIGILGKKLGMSQLFDEQGKAVPVTLIEAGPCRITQLKTTETDGYSAVQIGFGETRDKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G  +       + L E+RV  D D L +G   +   F  GQ VDV+G T+G+GF
Sbjct: 61  VNKPAKGHLAKSGEGVLRHLSEYRVD-DVDGLELGGAVTVGDFEAGQKVDVSGDTMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     THG S +HR  GSTG    PGR++  K+MAGR GG + T + L ++
Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKTTTRGLTIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            VD  R L++VKG VPG K  + + +R +
Sbjct: 179 RVDSDRNLLVVKGSVPG-KPGALLNIRPA 206


>gi|291298710|ref|YP_003509988.1| 50S ribosomal protein L3 [Stackebrandtia nassauensis DSM 44728]
 gi|290567930|gb|ADD40895.1| ribosomal protein L3 [Stackebrandtia nassauensis DSM 44728]
          Length = 220

 Score =  154 bits (390), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 96/211 (45%), Positives = 127/211 (60%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           +G++  KLGMT V++   R +PVTV+    C V   RT D +GY AVQ+  G+   + V+
Sbjct: 6   NGILGTKLGMTQVWDENNRVVPVTVVQAGPCVVTQVRTPDTDGYSAVQLAFGQIDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   V+P++ + E R   D      G   +   F  G LVDVTG T GKG++G
Sbjct: 66  KPLSGHFAKAEVAPRRHVVELRTT-DATEYSAGDEITVDRFETGGLVDVTGKTKGKGYAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGGL A HGV   HRS GS G    PGRVFK  +MAGRMGG R TV+NL++ +V
Sbjct: 125 VMKRHGFGGLGAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGGVRHTVQNLKIHAV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D    L+L+KG +PG      +LVR + K A
Sbjct: 185 DADNNLLLIKGALPGP-TGGLVLVRGAVKVA 214


>gi|172038926|ref|YP_001805427.1| 50S ribosomal protein L3 [Cyanothece sp. ATCC 51142]
 gi|254803668|sp|B1WQQ9|RL3_CYAA5 RecName: Full=50S ribosomal protein L3
 gi|171700380|gb|ACB53361.1| 50S ribosomal protein L3 [Cyanothece sp. ATCC 51142]
          Length = 212

 Score =  154 bits (390), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 85/198 (42%), Positives = 116/198 (58%), Gaps = 3/198 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT ++  E G  IPVTV+    C +   +T + +GY A+Q+G  E K K
Sbjct: 1   MAVGLLGTKLGMTQIFEEESGLAIPVTVVQAGPCTITQIKTAETDGYSAIQIGYLEVKEK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++KP  G    V  SP + L E+RV  D     +G       F  G LVD+ G ++G+G
Sbjct: 61  ALTKPELGHLKKVEASPLRHLKEYRVD-DTATYTLGEAVKADIFNAGDLVDIAGTSMGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G  KRHNF     THG S +HR  GSTG    PGRV+  KKMAG+ G  + T ++L+V
Sbjct: 120 FAGYQKRHNFKRGSMTHG-SKNHRLPGSTGAGTTPGRVYPGKKMAGQYGAVKTTTRHLQV 178

Query: 180 VSVDDKRGLILVKGCVPG 197
           V VD +R L+L+KG VPG
Sbjct: 179 VRVDAERNLLLIKGAVPG 196


>gi|157690900|ref|YP_001485362.1| 50S ribosomal protein L3 [Bacillus pumilus SAFR-032]
 gi|166989380|sp|A8F985|RL3_BACP2 RecName: Full=50S ribosomal protein L3
 gi|157679658|gb|ABV60802.1| ribosomal protein L3 [Bacillus pumilus SAFR-032]
          Length = 209

 Score =  154 bits (390), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 93/212 (43%), Positives = 126/212 (59%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T D +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVVEAAANVVLQKKTTDTDGYEAIQIGFDDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    +PK+ + E R   + D   VG       F  G +VDVTG + GKGF
Sbjct: 61  SNKPEKGHVAKAETAPKRFVKELR-GAELDAYEVGQEVKVDIFANGDIVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH       THG S  HR  GS G   DP RVFK K + GRMGG ++TV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMTHG-SRYHRRPGSMGP-VDPNRVFKGKLLPGRMGGEQITVQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGAKK S + V+ + KS
Sbjct: 178 KVDAERNLLLIKGNVPGAKK-SLVTVKSAVKS 208


>gi|195977208|ref|YP_002122452.1| 50S ribosomal protein L3 [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|225867665|ref|YP_002743613.1| 50S ribosomal protein L3 [Streptococcus equi subsp. zooepidemicus]
 gi|226730570|sp|B4U500|RL3_STREM RecName: Full=50S ribosomal protein L3
 gi|259709735|sp|C0MCB0|RL3_STRS7 RecName: Full=50S ribosomal protein L3
 gi|195973913|gb|ACG61439.1| 50S ribosomal protein L3 [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|225700941|emb|CAW97644.1| 50S ribosomal protein L3 [Streptococcus equi subsp. zooepidemicus]
          Length = 208

 Score =  154 bits (390), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 91/213 (42%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY A+QVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAIQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDIFAAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207


>gi|325000492|ref|ZP_08121604.1| ribosomal protein L3 [Pseudonocardia sp. P1]
          Length = 225

 Score =  154 bits (390), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 88/197 (44%), Positives = 121/197 (61%), Gaps = 1/197 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           +GV+  KLGMT V++   R +PVTV+ +    V   R+ + +GY AVQ+  G    + V+
Sbjct: 15  TGVLGTKLGMTQVFDDNNRVVPVTVVQVGPNVVTQVRSEESDGYTAVQLAYGAIDPRKVN 74

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V+P++ L E R     D  P   + + ++  + + VDV G+T GKGF+G
Sbjct: 75  KPETGHFAKAGVTPRRHLLELRTADAADYTPGQEITAEAFAEIAE-VDVVGVTKGKGFAG 133

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F GL A+HG    HRS GS G    PGRVFK  +MAGRMG  R T +NL+V  V
Sbjct: 134 VMKRHGFAGLGASHGTQRKHRSPGSIGGCATPGRVFKGVRMAGRMGSERQTTQNLKVHRV 193

Query: 183 DDKRGLILVKGCVPGAK 199
           D +RGL+L+KG VPGA+
Sbjct: 194 DAERGLLLIKGAVPGAR 210


>gi|225869536|ref|YP_002745483.1| 50S ribosomal protein L3 [Streptococcus equi subsp. equi 4047]
 gi|254803692|sp|C0M660|RL3_STRE4 RecName: Full=50S ribosomal protein L3
 gi|225698940|emb|CAW91967.1| 50S ribosomal protein L3 [Streptococcus equi subsp. equi 4047]
          Length = 208

 Score =  154 bits (390), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 91/213 (42%), Positives = 130/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT ++   G  IPVTV+      V+  +T++ +GY A+QVG  + +   
Sbjct: 1   MTKGILGEKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAIQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDIFAAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGP-VSPNRVFKNKHLAGRMGGNRVTIQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207


>gi|150008984|ref|YP_001303727.1| 50S ribosomal protein L3 [Parabacteroides distasonis ATCC 8503]
 gi|255014815|ref|ZP_05286941.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_7]
 gi|256841015|ref|ZP_05546522.1| 50S ribosomal protein L3 [Parabacteroides sp. D13]
 gi|262383874|ref|ZP_06077010.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_33B]
 gi|298375783|ref|ZP_06985739.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_19]
 gi|301312033|ref|ZP_07217955.1| 50S ribosomal protein L3 [Bacteroides sp. 20_3]
 gi|166233171|sp|A6LEJ1|RL3_PARD8 RecName: Full=50S ribosomal protein L3
 gi|149937408|gb|ABR44105.1| ribosomal protein L3 [Parabacteroides distasonis ATCC 8503]
 gi|256736858|gb|EEU50185.1| 50S ribosomal protein L3 [Parabacteroides sp. D13]
 gi|262294772|gb|EEY82704.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_33B]
 gi|298266820|gb|EFI08477.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_19]
 gi|300830135|gb|EFK60783.1| 50S ribosomal protein L3 [Bacteroides sp. 20_3]
          Length = 205

 Score =  154 bits (390), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 86/205 (41%), Positives = 125/205 (60%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EG+ +P TV+ +  C V   +TL+K+GY AVQ+G  E K K+ ++
Sbjct: 3   GLLGKKIGMTSVFSAEGKNLPCTVIEVGPCVVTQIKTLEKDGYEAVQLGFQEKKEKHTTQ 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ L EF+  + +  L  G V +  +      VDV G + GKGF G 
Sbjct: 63  PEMGHFKKAGVAPQRHLAEFKNFETEYKL--GDVITVDFLEDAGFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ + THG     R  GS G    P +VFK  +M G+MG  RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGNERVTVQNLQVIKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  L+LVKG VPGA K S +L+ 
Sbjct: 181 MPEHNLLLVKGSVPGA-KGSILLIE 204


>gi|148238770|ref|YP_001224157.1| 50S ribosomal protein L3 [Synechococcus sp. WH 7803]
 gi|166234602|sp|A5GIU5|RL3_SYNPW RecName: Full=50S ribosomal protein L3
 gi|147847309|emb|CAK22860.1| 50S ribosomal protein L3 [Synechococcus sp. WH 7803]
          Length = 218

 Score =  154 bits (390), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 83/209 (39%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +G+ +PVT++    C++   +T + +GY AVQ+G GE + K 
Sbjct: 1   MSIGILGKKLGMSQLFDEQGKAVPVTLIEAGPCRITQLKTTETDGYSAVQIGFGETRDKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G  +       + L E+RV  D + L +G   + S F  GQ VDV+G T+G+GF
Sbjct: 61  VNKPAKGHLAKSGEGVLRHLSEYRVD-DVNGLELGGAVTVSDFEAGQKVDVSGDTMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     THG S +HR  GSTG    PGR++  K+MAGR GG + T + L ++
Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKTTTRGLTIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            VD  R L++VKG VPG K  + + +R +
Sbjct: 179 KVDSDRNLLVVKGSVPG-KPGALLNIRPA 206


>gi|308172007|ref|YP_003918712.1| 50S ribosomal protein L3 (BL3) [Bacillus amyloliquefaciens DSM 7]
 gi|307604871|emb|CBI41242.1| ribosomal protein L3 (BL3) [Bacillus amyloliquefaciens DSM 7]
 gi|328551817|gb|AEB22309.1| 50S ribosomal protein L3 [Bacillus amyloliquefaciens TA208]
 gi|328910077|gb|AEB61673.1| ribosomal protein L3 (BL3) [Bacillus amyloliquefaciens LL3]
          Length = 209

 Score =  154 bits (390), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 130/212 (61%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQLGFDDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    +PK+ + E R   D D   +G       F+ G++VDVTG++ GKGF
Sbjct: 61  SNKPEKGHVAKAETAPKRFVKELR-GVDMDAYEIGQEVKVEIFSAGEIVDVTGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH       +HG S  HR  GS G   DP RVFK K + GRMGG+++TV+NLEVV
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGP-VDPNRVFKGKLLPGRMGGDQITVQNLEVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA+K + I V+ + KS
Sbjct: 178 KVDAERNLLLIKGNVPGARK-ALITVKSAVKS 208


>gi|239618265|ref|YP_002941587.1| ribosomal protein L3 [Kosmotoga olearia TBF 19.5.1]
 gi|259646550|sp|C5CGR4|RL3_KOSOT RecName: Full=50S ribosomal protein L3
 gi|239507096|gb|ACR80583.1| ribosomal protein L3 [Kosmotoga olearia TBF 19.5.1]
          Length = 213

 Score =  154 bits (390), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 90/200 (45%), Positives = 120/200 (60%), Gaps = 7/200 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG----AGEAKVK 59
           G++ RKLGMT +Y  +G+ + VTV+    C VV  +T     Y A+Q+G    + E   K
Sbjct: 3   GIIGRKLGMTTIYE-DGKALGVTVIKAGPCTVVQKKTAAGGEYNAIQLGFEELSPERAKK 61

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++KP+   F +  V P + L E RV+  D+   VG V     F  G+LVDVTG T G+G
Sbjct: 62  LLTKPILKKFEAAKVKPHRILKEIRVENPDEY-NVGDVIDAGIFKEGELVDVTGWTKGRG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+GAMKR NFGG   THG S  HR  GS G   +P +++K KKM GR G  RVTV N++V
Sbjct: 121 FTGAMKRWNFGGGEVTHG-SKFHRELGSVGNHTEPAKIWKGKKMPGRYGNERVTVLNVKV 179

Query: 180 VSVDDKRGLILVKGCVPGAK 199
           V VD + GLI + G VPGA+
Sbjct: 180 VKVDAENGLIAIHGAVPGAR 199


>gi|194017514|ref|ZP_03056125.1| ribosomal protein L3 [Bacillus pumilus ATCC 7061]
 gi|194010786|gb|EDW20357.1| ribosomal protein L3 [Bacillus pumilus ATCC 7061]
          Length = 209

 Score =  154 bits (390), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 93/212 (43%), Positives = 126/212 (59%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T D +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVVEAAANVVLQKKTADTDGYEAIQIGFDDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    +PK+ + E R   + D   VG       F  G +VDVTG + GKGF
Sbjct: 61  SNKPEKGHVAKAETAPKRFVKELR-GAELDAYEVGQEVKVDIFANGDIVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH       THG S  HR  GS G   DP RVFK K + GRMGG ++TV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMTHG-SRYHRRPGSMGP-VDPNRVFKGKLLPGRMGGEQITVQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGAKK S + V+ + KS
Sbjct: 178 KVDAERNLLLIKGNVPGAKK-SLVTVKSAVKS 208


>gi|227487123|ref|ZP_03917439.1| 50S ribosomal protein L3 [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227541710|ref|ZP_03971759.1| 50S ribosomal protein L3 [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227092781|gb|EEI28093.1| 50S ribosomal protein L3 [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227182525|gb|EEI63497.1| 50S ribosomal protein L3 [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 216

 Score =  154 bits (390), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 85/210 (40%), Positives = 121/210 (57%), Gaps = 6/210 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++ + R +PVTV+    C V   RT++ +GY A+Q+  GE   +   K
Sbjct: 8   GILGTKLGMTQVFDEDNRVVPVTVVEAGPCVVTQIRTVETDGYNAIQIAYGEIDPRKAKK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           P  G       +P++ + E R+   DD+    +G   +   F    LVDVTG T GKG++
Sbjct: 68  PQVGHAKKAGATPRRHVAEIRM---DDVSGYELGQDVTVDIFEGVNLVDVTGTTKGKGYA 124

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           GAMKRH F G  A HG   +HR  G  G    PGRVFK  +MAGRMG +RVT +NL+V  
Sbjct: 125 GAMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGQDRVTTQNLKVQR 184

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +D +  LIL+KG +PG  +   + V+ + K
Sbjct: 185 IDAEANLILIKGAIPG-NRGGLVTVKTAVK 213


>gi|171778375|ref|ZP_02919554.1| hypothetical protein STRINF_00405 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282906|gb|EDT48330.1| hypothetical protein STRINF_00405 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 208

 Score =  154 bits (390), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 93/213 (43%), Positives = 130/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG   +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGQEITVDTFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207


>gi|16329941|ref|NP_440669.1| 50S ribosomal protein L3 [Synechocystis sp. PCC 6803]
 gi|2500229|sp|P73320|RL3_SYNY3 RecName: Full=50S ribosomal protein L3
 gi|1652427|dbj|BAA17349.1| 50S ribosomal protein L3 [Synechocystis sp. PCC 6803]
          Length = 213

 Score =  154 bits (390), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 87/198 (43%), Positives = 118/198 (59%), Gaps = 3/198 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT +++ E G  IPVTV+    C V   +T D +GY A+QVG    K K
Sbjct: 1   MSIGILGTKLGMTQIFDQESGISIPVTVVQAGPCPVTQVKTQDTDGYNAIQVGFLPVKEK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            +SKP  G     N  P + L E+R+    +L P G   +   F  G LVDV G ++G+G
Sbjct: 61  ALSKPELGHLKKSNTDPMRHLKEYRLTDAPNLQP-GDAVTADIFQAGDLVDVAGQSMGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G  KRHNF     THG S +HR  GSTG    PGRV+  K+MAG+ G ++VTV+ L V
Sbjct: 120 FAGYQKRHNFRRGNMTHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGQYGASQVTVRRLTV 178

Query: 180 VSVDDKRGLILVKGCVPG 197
           V VD +R L+++KG +PG
Sbjct: 179 VRVDAERNLLIIKGALPG 196


>gi|160883064|ref|ZP_02064067.1| hypothetical protein BACOVA_01027 [Bacteroides ovatus ATCC 8483]
 gi|260175416|ref|ZP_05761828.1| 50S ribosomal protein L3 [Bacteroides sp. D2]
 gi|299144624|ref|ZP_07037692.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_23]
 gi|315923646|ref|ZP_07919886.1| 50S ribosomal protein L3 [Bacteroides sp. D2]
 gi|156111536|gb|EDO13281.1| hypothetical protein BACOVA_01027 [Bacteroides ovatus ATCC 8483]
 gi|298515115|gb|EFI38996.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_23]
 gi|313697521|gb|EFS34356.1| 50S ribosomal protein L3 [Bacteroides sp. D2]
          Length = 205

 Score =  154 bits (390), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 84/205 (40%), Positives = 125/205 (60%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PK+ L EF+    D  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKRAGVTPKRHLAEFKEFGTD--LNLGDTITVEMFNDANFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ +ATHG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
                L+L+KG +PG  K S +L+ 
Sbjct: 181 IADHNLLLIKGSIPGC-KGSIVLIE 204


>gi|154684634|ref|YP_001419795.1| 50S ribosomal protein L3 [Bacillus amyloliquefaciens FZB42]
 gi|166233116|sp|A7Z0N8|RL3_BACA2 RecName: Full=50S ribosomal protein L3
 gi|154350485|gb|ABS72564.1| RplC [Bacillus amyloliquefaciens FZB42]
          Length = 209

 Score =  154 bits (390), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 130/212 (61%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQLGFDDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    +PK+ + E R   D D   +G       F+ G++VDVTG++ GKGF
Sbjct: 61  SNKPEKGHVAKAETAPKRFVKELR-GVDMDAYEIGQEVKVEIFSAGEIVDVTGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH       +HG S  HR  GS G   DP RVFK K + GRMGG+++TV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGP-VDPNRVFKGKLLPGRMGGDQITVQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA+K + I V+ + KS
Sbjct: 178 KVDAERNLLLIKGNVPGARK-TLITVKSAVKS 208


>gi|217077283|ref|YP_002335001.1| ribosomal protein L3 [Thermosipho africanus TCF52B]
 gi|226730580|sp|B7IHU6|RL3_THEAB RecName: Full=50S ribosomal protein L3
 gi|217037138|gb|ACJ75660.1| ribosomal protein L3 [Thermosipho africanus TCF52B]
          Length = 205

 Score =  154 bits (390), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 87/205 (42%), Positives = 122/205 (59%), Gaps = 6/205 (2%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RK+GMT ++  + + IPVTV+    C VV  +T+D +GY A+Q+G  EAK   V+KP
Sbjct: 4   IIGRKVGMTRIFK-DDKVIPVTVIKAGPCYVVQKKTIDTDGYNAIQIGFEEAK--KVNKP 60

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M G F    V P K L EFRV+  ++   +G       F  G  +D+TG + G+GF+GAM
Sbjct: 61  MEGVFKKAGVKPLKILKEFRVENPEEF-ELGQEIKVDIFAEGDKIDITGWSKGRGFAGAM 119

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR  F G   +HG    HR  GS G   +P R+FK KKM G+ G  RVT+ N E+V +D 
Sbjct: 120 KRWGFRGGPKSHGAKF-HRELGSVGQHSEPARIFKGKKMPGQYGNERVTILNSEIVKIDV 178

Query: 185 KRGLILVKGCVPGAKKNSWILVRDS 209
           +  LI VKG VPGA +   +L+R +
Sbjct: 179 ENNLIAVKGGVPGA-RGGLVLIRTA 202


>gi|305665137|ref|YP_003861424.1| 50S ribosomal protein L3 [Maribacter sp. HTCC2170]
 gi|88709889|gb|EAR02121.1| 50S ribosomal protein L3 [Maribacter sp. HTCC2170]
          Length = 207

 Score =  154 bits (390), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 84/206 (40%), Positives = 123/206 (59%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ +P TV+    C V   RT + +GY A+Q+G  +   K  +
Sbjct: 2   SGLIGKKVGMTSIFDENGKNVPCTVIEAGPCVVTQVRTEEVDGYSALQLGFDDKAEKRAN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F     SPKKK+ EF  Q  +    +G       F  G+ VDV G + GKGF G
Sbjct: 62  KAESGHFKKAGASPKKKVVEF--QGFEGEYKLGDTIGVDVFVEGEFVDVVGTSKGKGFQG 119

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH F G+ +ATHG     R+ GS G    P RVFK  +MAGRMGG+R TV+NL V+ 
Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGDRTTVQNLRVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           +  ++ L++VKGCVPG  KN+++ ++
Sbjct: 180 IVPEKNLLVVKGCVPG-HKNAYVTIK 204


>gi|288818164|ref|YP_003432512.1| ribosomal protein L3 [Hydrogenobacter thermophilus TK-6]
 gi|288787564|dbj|BAI69311.1| ribosomal protein L3 [Hydrogenobacter thermophilus TK-6]
 gi|308751765|gb|ADO45248.1| 50S ribosomal protein L3 [Hydrogenobacter thermophilus TK-6]
          Length = 235

 Score =  154 bits (389), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 89/205 (43%), Positives = 130/205 (63%), Gaps = 17/205 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+  +G  IPVT++ +    VV  ++++K+GY A+Q+GA  AK K+
Sbjct: 1   MAIGLIGKKVGMTRVFLKDGTAIPVTLIEIPPHTVVAIKSIEKDGYSALQLGAYSAKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--------LPVGSVFSPSYFTVGQLVDVT 112
           ++KP  G    V V   ++L EFRV   DD+        L V  VFSP     G+LVDV 
Sbjct: 61  LTKPEMGHLQKVGVRLLRRLKEFRV---DDIAGYQVGQELTVADVFSP-----GELVDVV 112

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ G+GF+G MKR +FGG   +HG    HR+ GS G R DPGRV+K+K+MAG  G  +V
Sbjct: 113 GISKGRGFTGTMKRWDFGGFPKSHGHRY-HRAVGSIGNRSDPGRVWKSKRMAGHYGAQKV 171

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPG 197
            +++L VV +  ++ L+LVKG VPG
Sbjct: 172 RIQSLFVVDIVPEKNLMLVKGSVPG 196


>gi|283782758|ref|YP_003373512.1| 50S ribosomal protein L3 [Gardnerella vaginalis 409-05]
 gi|297242968|ref|ZP_06926906.1| ribosomal protein L3 [Gardnerella vaginalis AMD]
 gi|298253073|ref|ZP_06976865.1| ribosomal protein L3 [Gardnerella vaginalis 5-1]
 gi|283442144|gb|ADB14610.1| 50S ribosomal protein L3 [Gardnerella vaginalis 409-05]
 gi|296889179|gb|EFH27913.1| ribosomal protein L3 [Gardnerella vaginalis AMD]
 gi|297532468|gb|EFH71354.1| ribosomal protein L3 [Gardnerella vaginalis 5-1]
          Length = 216

 Score =  154 bits (389), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 122/212 (57%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+ ++ RKLGM+ V++  G  +PVT++ +    V   +T++ +GY AVQ+G G+     V
Sbjct: 7   RTALLGRKLGMSQVWDENGFFVPVTLVEVATNVVTAVKTVESDGYCAVQLGYGQIDPTKV 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G F+   V+P++ L E R +   D  P G   +   F  G  VDVTG T GKGF+
Sbjct: 67  TKPLAGHFAKAGVTPRRHLAEVRTENAADYQP-GQELTAELFAEGSEVDVTGTTKGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F   R THG   + R  GS G    P R+ K K+MAGRMG    T  NL +VS
Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTSTALNLTIVS 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D + G++ +KG VPG  K + +LVR + K A
Sbjct: 186 SDVENGILAIKGAVPG-PKGAIVLVRSAVKGA 216


>gi|295401920|ref|ZP_06811883.1| 50S ribosomal protein L3 [Geobacillus thermoglucosidasius C56-YS93]
 gi|312109261|ref|YP_003987577.1| 50S ribosomal protein L3 [Geobacillus sp. Y4.1MC1]
 gi|294976050|gb|EFG51665.1| 50S ribosomal protein L3 [Geobacillus thermoglucosidasius C56-YS93]
 gi|311214362|gb|ADP72966.1| 50S ribosomal protein L3 [Geobacillus sp. Y4.1MC1]
          Length = 211

 Score =  154 bits (389), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 93/219 (42%), Positives = 129/219 (58%), Gaps = 8/219 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++K+GY A+Q+G  +   K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTIEKDGYEAIQLGFEDLSEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP  G  +  N +PK+ + E R    D+   VG       F+ G +VDVTG++ GKGF
Sbjct: 61  ANKPQIGHAAKANTAPKRFIREIRGANIDEY-EVGQEVKVDIFSEGDIVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    P RVFK+K++ GRMGG RVT++NL++V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGAIA-PNRVFKSKELPGRMGGQRVTIQNLKIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            VD +R L+L+KG VPG +K   I+     KSAV  K K
Sbjct: 178 KVDPERNLLLIKGNVPGPRKGLVIV-----KSAVKAKAK 211


>gi|29374851|ref|NP_814004.1| 50S ribosomal protein L3 [Enterococcus faecalis V583]
 gi|227519992|ref|ZP_03950041.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0104]
 gi|227555853|ref|ZP_03985900.1| 50S ribosomal protein L3 [Enterococcus faecalis HH22]
 gi|229546964|ref|ZP_04435689.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1322]
 gi|229550553|ref|ZP_04439278.1| 50S ribosomal protein L3 [Enterococcus faecalis ATCC 29200]
 gi|255971709|ref|ZP_05422295.1| 50S ribosomal protein L3 [Enterococcus faecalis T1]
 gi|255974709|ref|ZP_05425295.1| 50S ribosomal protein L3 [Enterococcus faecalis T2]
 gi|256618380|ref|ZP_05475226.1| 50S ribosomal protein L3 [Enterococcus faecalis ATCC 4200]
 gi|256762003|ref|ZP_05502583.1| 50S ribosomal protein L3 [Enterococcus faecalis T3]
 gi|256855163|ref|ZP_05560524.1| ribosomal protein L3 [Enterococcus faecalis T8]
 gi|256956862|ref|ZP_05561033.1| 50S ribosomal protein L3 [Enterococcus faecalis DS5]
 gi|256960669|ref|ZP_05564840.1| 50S ribosomal protein L3 [Enterococcus faecalis Merz96]
 gi|256964132|ref|ZP_05568303.1| 50S ribosomal protein L3 [Enterococcus faecalis HIP11704]
 gi|257078532|ref|ZP_05572893.1| 50S ribosomal protein L3 [Enterococcus faecalis JH1]
 gi|257081497|ref|ZP_05575858.1| 50S ribosomal protein L3 [Enterococcus faecalis E1Sol]
 gi|257084145|ref|ZP_05578506.1| 50S ribosomal protein L3 [Enterococcus faecalis Fly1]
 gi|257087972|ref|ZP_05582333.1| 50S ribosomal protein L3 [Enterococcus faecalis D6]
 gi|257088649|ref|ZP_05583010.1| 50S ribosomal protein L3 [Enterococcus faecalis CH188]
 gi|257417576|ref|ZP_05594570.1| 50S ribosomal protein L3 [Enterococcus faecalis AR01/DG]
 gi|257418699|ref|ZP_05595693.1| 50S ribosomal protein L3 [Enterococcus faecalis T11]
 gi|257421500|ref|ZP_05598490.1| 50S ribosomal protein L3 [Enterococcus faecalis X98]
 gi|293382758|ref|ZP_06628683.1| 50S ribosomal protein L3 [Enterococcus faecalis R712]
 gi|293388059|ref|ZP_06632587.1| 50S ribosomal protein L3 [Enterococcus faecalis S613]
 gi|294781051|ref|ZP_06746402.1| 50S ribosomal protein L3 [Enterococcus faecalis PC1.1]
 gi|300862213|ref|ZP_07108293.1| 50S ribosomal protein L3 [Enterococcus faecalis TUSoD Ef11]
 gi|307269087|ref|ZP_07550448.1| 50S ribosomal protein L3 [Enterococcus faecalis TX4248]
 gi|307274171|ref|ZP_07555379.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0855]
 gi|307276396|ref|ZP_07557519.1| 50S ribosomal protein L3 [Enterococcus faecalis TX2134]
 gi|307278606|ref|ZP_07559676.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0860]
 gi|307287014|ref|ZP_07567089.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0109]
 gi|307291645|ref|ZP_07571520.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0411]
 gi|312901122|ref|ZP_07760410.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0470]
 gi|312904684|ref|ZP_07763839.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0635]
 gi|312908653|ref|ZP_07767595.1| 50S ribosomal protein L3 [Enterococcus faecalis DAPTO 512]
 gi|312909199|ref|ZP_07768056.1| 50S ribosomal protein L3 [Enterococcus faecalis DAPTO 516]
 gi|312952607|ref|ZP_07771471.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0102]
 gi|42559615|sp|Q839G4|RL3_ENTFA RecName: Full=50S ribosomal protein L3
 gi|29342309|gb|AAO80075.1| ribosomal protein L3 [Enterococcus faecalis V583]
 gi|227072540|gb|EEI10503.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0104]
 gi|227175020|gb|EEI55992.1| 50S ribosomal protein L3 [Enterococcus faecalis HH22]
 gi|229304272|gb|EEN70268.1| 50S ribosomal protein L3 [Enterococcus faecalis ATCC 29200]
 gi|229307892|gb|EEN73879.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1322]
 gi|255962727|gb|EET95203.1| 50S ribosomal protein L3 [Enterococcus faecalis T1]
 gi|255967581|gb|EET98203.1| 50S ribosomal protein L3 [Enterococcus faecalis T2]
 gi|256597907|gb|EEU17083.1| 50S ribosomal protein L3 [Enterococcus faecalis ATCC 4200]
 gi|256683254|gb|EEU22949.1| 50S ribosomal protein L3 [Enterococcus faecalis T3]
 gi|256709676|gb|EEU24723.1| ribosomal protein L3 [Enterococcus faecalis T8]
 gi|256947358|gb|EEU63990.1| 50S ribosomal protein L3 [Enterococcus faecalis DS5]
 gi|256951165|gb|EEU67797.1| 50S ribosomal protein L3 [Enterococcus faecalis Merz96]
 gi|256954628|gb|EEU71260.1| 50S ribosomal protein L3 [Enterococcus faecalis HIP11704]
 gi|256986562|gb|EEU73864.1| 50S ribosomal protein L3 [Enterococcus faecalis JH1]
 gi|256989527|gb|EEU76829.1| 50S ribosomal protein L3 [Enterococcus faecalis E1Sol]
 gi|256992175|gb|EEU79477.1| 50S ribosomal protein L3 [Enterococcus faecalis Fly1]
 gi|256996002|gb|EEU83304.1| 50S ribosomal protein L3 [Enterococcus faecalis D6]
 gi|256997461|gb|EEU83981.1| 50S ribosomal protein L3 [Enterococcus faecalis CH188]
 gi|257159404|gb|EEU89364.1| 50S ribosomal protein L3 [Enterococcus faecalis ARO1/DG]
 gi|257160527|gb|EEU90487.1| 50S ribosomal protein L3 [Enterococcus faecalis T11]
 gi|257163324|gb|EEU93284.1| 50S ribosomal protein L3 [Enterococcus faecalis X98]
 gi|291079918|gb|EFE17282.1| 50S ribosomal protein L3 [Enterococcus faecalis R712]
 gi|291082510|gb|EFE19473.1| 50S ribosomal protein L3 [Enterococcus faecalis S613]
 gi|294451854|gb|EFG20305.1| 50S ribosomal protein L3 [Enterococcus faecalis PC1.1]
 gi|295112506|emb|CBL31143.1| LSU ribosomal protein L3P [Enterococcus sp. 7L76]
 gi|300848738|gb|EFK76495.1| 50S ribosomal protein L3 [Enterococcus faecalis TUSoD Ef11]
 gi|306497264|gb|EFM66806.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0411]
 gi|306501960|gb|EFM71249.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0109]
 gi|306504666|gb|EFM73866.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0860]
 gi|306506876|gb|EFM76023.1| 50S ribosomal protein L3 [Enterococcus faecalis TX2134]
 gi|306509133|gb|EFM78195.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0855]
 gi|306514567|gb|EFM83121.1| 50S ribosomal protein L3 [Enterococcus faecalis TX4248]
 gi|310625440|gb|EFQ08723.1| 50S ribosomal protein L3 [Enterococcus faecalis DAPTO 512]
 gi|310629395|gb|EFQ12678.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0102]
 gi|310632036|gb|EFQ15319.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0635]
 gi|311290441|gb|EFQ68997.1| 50S ribosomal protein L3 [Enterococcus faecalis DAPTO 516]
 gi|311291794|gb|EFQ70350.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0470]
 gi|315026835|gb|EFT38767.1| 50S ribosomal protein L3 [Enterococcus faecalis TX2137]
 gi|315028875|gb|EFT40807.1| 50S ribosomal protein L3 [Enterococcus faecalis TX4000]
 gi|315031139|gb|EFT43071.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0017]
 gi|315036015|gb|EFT47947.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0027]
 gi|315145336|gb|EFT89352.1| 50S ribosomal protein L3 [Enterococcus faecalis TX2141]
 gi|315147171|gb|EFT91187.1| 50S ribosomal protein L3 [Enterococcus faecalis TX4244]
 gi|315151071|gb|EFT95087.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0012]
 gi|315153609|gb|EFT97625.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0031]
 gi|315156211|gb|EFU00228.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0043]
 gi|315158644|gb|EFU02661.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0312]
 gi|315160728|gb|EFU04745.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0645]
 gi|315165901|gb|EFU09918.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1302]
 gi|315168100|gb|EFU12117.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1341]
 gi|315171460|gb|EFU15477.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1342]
 gi|315172694|gb|EFU16711.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1346]
 gi|315573514|gb|EFU85705.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0309B]
 gi|315579326|gb|EFU91517.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0630]
 gi|315582138|gb|EFU94329.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0309A]
 gi|323479422|gb|ADX78861.1| 50S ribosomal protein L3 [Enterococcus faecalis 62]
 gi|327534004|gb|AEA92838.1| 50S ribosomal protein L3 [Enterococcus faecalis OG1RF]
 gi|329577749|gb|EGG59175.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1467]
          Length = 209

 Score =  154 bits (389), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 93/214 (43%), Positives = 132/214 (61%), Gaps = 8/214 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY A+QVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQVKTVETDGYEAIQVGYQDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
            +KP +G  +  N +PK+ + EF   K+ +L    VG       F  G +VDVTG T GK
Sbjct: 61  SNKPAKGHVAKANTAPKRFIKEF---KNVELGEYEVGKEIKVDVFQAGDVVDVTGTTKGK 117

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF GA+KRH       +HG S  HR  GS G    P RVFKNK++AGRMGG+RVT++NLE
Sbjct: 118 GFQGAIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGDRVTIQNLE 175

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VV VD +R +IL+KG +PGAKK S I ++ + K+
Sbjct: 176 VVKVDVERNVILIKGNIPGAKK-SLITIKSAVKA 208


>gi|88803750|ref|ZP_01119274.1| 50S ribosomal protein L3 [Polaribacter irgensii 23-P]
 gi|88780483|gb|EAR11664.1| 50S ribosomal protein L3 [Polaribacter irgensii 23-P]
          Length = 205

 Score =  154 bits (389), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 83/206 (40%), Positives = 130/206 (63%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ RK+GMT +++  G+ IP TV+    C V   RT++ +GY A+Q+G  +   K+ +
Sbjct: 2   SGLIGRKIGMTSLFDENGKNIPCTVIEAGPCVVTQVRTIEVDGYSALQLGFDDKTAKSSN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K + G F       KKK+ EF  Q  +++  +G   S ++F  G+ VDV+G++ GKGF G
Sbjct: 62  KALDGHFKKAGSVAKKKVVEF--QGFEEVYKLGDSISVAHFEEGEFVDVSGVSKGKGFQG 119

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH F G+ +ATHG     R+ GS G    P RVFK  +MAGRMGG++V V+NL V+ 
Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGDKVKVQNLRVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L++VKG +PG  KN+++ ++
Sbjct: 180 VVAEKNLLVVKGAIPG-HKNAFVTIQ 204


>gi|313904952|ref|ZP_07838323.1| 50S ribosomal protein L3 [Eubacterium cellulosolvens 6]
 gi|313470209|gb|EFR65540.1| 50S ribosomal protein L3 [Eubacterium cellulosolvens 6]
          Length = 211

 Score =  154 bits (389), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 92/212 (43%), Positives = 121/212 (57%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT +++  G  IPVTVL    C V   +T + +GY AVQVG GE + K 
Sbjct: 1   MKKAILATKVGMTQIFDETGASIPVTVLQAGPCVVTQVKTEENDGYAAVQVGFGEIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G F    V  K+ L EFR     +   V        F  G  +D T ++ GKGF
Sbjct: 61  VNKPKKGQFDKAEVPVKRYLQEFRFDNAAE-YEVKQEIKADIFADGDHIDATAISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G   DP +VFK K M G MG  +VTV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGSCSDPSKVFKGKHMPGHMGHVKVTVQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  L+LVKG VPG KK S I +++S K+
Sbjct: 179 KVDAENNLLLVKGSVPGPKK-SLITIKESVKA 209


>gi|11467717|ref|NP_050769.1| ribosomal protein L3 [Guillardia theta]
 gi|3914660|sp|O46894|RK3_GUITH RecName: Full=50S ribosomal protein L3, chloroplastic
 gi|3603042|gb|AAC35703.1| ribosomal protein L3 [Guillardia theta]
          Length = 204

 Score =  154 bits (389), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 83/201 (41%), Positives = 121/201 (60%), Gaps = 2/201 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++  KLGMT +++  G  IPVT+L +  C V   ++  K+ Y A+Q+G  +   K 
Sbjct: 1   MKIGLLGTKLGMTQIFDDNGSAIPVTILKVGPCYVTNLKSDTKDNYNAIQIGYQQVDAKK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP  G     N+ P K L E++V        +      S F +GQ+V V+G++IGKGF
Sbjct: 61  LTKPQLGHLQVNNLPPLKHLKEYKVDATHTFT-IAQQLDVSIFELGQIVSVSGVSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNF     THG S +HR  GS G    P +V K KKMAGR+GG++VT KNL VV
Sbjct: 120 AGTVKRHNFTRGPMTHG-SKNHREPGSIGQGSTPAKVHKGKKMAGRLGGHQVTTKNLTVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKN 201
            +D    ++++KGCVPG + N
Sbjct: 179 HLDKDNNVLVLKGCVPGKRGN 199


>gi|262341013|ref|YP_003283868.1| 50S ribosomal protein L3 [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272350|gb|ACY40258.1| 50S ribosomal protein L3 [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 210

 Score =  154 bits (389), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 89/205 (43%), Positives = 133/205 (64%), Gaps = 3/205 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ + +GMT ++   G+ +P TV+ ++ C V+  +T++ +GY +VQ+G GE K+K  +
Sbjct: 2   SGLIGKNIGMTSIFLENGKNVPCTVIKVNPCYVIQIKTVENDGYFSVQLGTGEKKLKKTN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
            P+ G F    +SP+KKL EFR +     L +G   S   F  G+LV+V G++ GKGF G
Sbjct: 62  NPLLGHFKKSGLSPRKKLLEFR-ENSISHLKLGEKVSVDTFKKGELVNVKGISKGKGFQG 120

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRHNF G+   +HG     RS GS G   DP RVFK KKMAG+MG   +TVKNLE++ 
Sbjct: 121 VVKRHNFSGVGERSHGQHNRLRSPGSIGAGSDPSRVFKGKKMAGKMGKKNITVKNLEILK 180

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           +D  + LI++KG VPG  KNS++++
Sbjct: 181 IDIHQNLIILKGSVPG-NKNSYLMI 204


>gi|42559578|sp|P60457|RL3_SPIKU RecName: Full=50S ribosomal protein L3
 gi|34849393|gb|AAP58892.1| ribosomal protein L3 [Spiroplasma kunkelii CR2-3x]
          Length = 258

 Score =  154 bits (389), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 81/208 (38%), Positives = 132/208 (63%), Gaps = 6/208 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT ++  +GR IPVTV+ +++  V+   T ++NGY A+Q+   + ++  VSK
Sbjct: 3   GILGRKIGMTQIFATDGRLIPVTVVEVEHNIVLRVLTKEQNGYQALQLAVEDKRISLVSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G F   N +PK+ + E R   + D    G +     FT G+ VDVTG + GKGF+G+
Sbjct: 63  PDQGQFKKANTTPKRFVKEIR---NMDGYNSGDIIKADIFTAGEFVDVTGTSKGKGFTGS 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KRHN+      HG S  HR  GS G    P R+ K+KKM G +G  +VT++NLE++++D
Sbjct: 120 IKRHNYSRGPMGHG-SGYHRGVGSMGAIA-PNRILKSKKMPGHIGTEKVTIQNLEIIAID 177

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            ++  +LVKG +PG KK  +++++++ K
Sbjct: 178 TEKNALLVKGSIPGPKKQ-FVVIKEAIK 204


>gi|261338279|ref|ZP_05966163.1| 50S ribosomal protein L3 [Bifidobacterium gallicum DSM 20093]
 gi|270276934|gb|EFA22788.1| 50S ribosomal protein L3 [Bifidobacterium gallicum DSM 20093]
          Length = 216

 Score =  154 bits (389), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 86/212 (40%), Positives = 123/212 (58%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+ ++ +KLGM+ V++  G  IPVT++ +    V   +T + +GY AVQ+G G+A    +
Sbjct: 7   RTALLGKKLGMSQVWDENGFFIPVTLIDVSTNVVTAVKTEETDGYNAVQLGYGQADPTKI 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KPM G F+   V+P++ L E R +   +  P G   +   F  G  VDVTG T GKGF+
Sbjct: 67  TKPMAGHFAKAGVTPRRHLAEVRTENVAEFEP-GQELTAELFPEGVQVDVTGTTKGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F   R THG   + R  GS G    P R+ K K+MAGRMG +  TV NL ++S
Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHDTNTVLNLTIMS 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D + G+I VKG +PG  K   +LVR + K A
Sbjct: 186 SDVENGIIAVKGAIPGP-KGGIVLVRSAVKGA 216


>gi|189485085|ref|YP_001956026.1| 50S ribosomal protein L3 [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|212288415|sp|B1GZ83|RL3_UNCTG RecName: Full=50S ribosomal protein L3
 gi|170287044|dbj|BAG13565.1| 50S ribosomal protein L3 [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 227

 Score =  154 bits (389), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 85/201 (42%), Positives = 125/201 (62%), Gaps = 2/201 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT V++++G  +PVTV+ + +C V   RT++KNGY AVQ+G GE K K ++K 
Sbjct: 5   IIGKKIGMTQVFDVKGNLMPVTVVEVGHCVVTDVRTVEKNGYSAVQLGFGEIKEKGLNKA 64

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
              FF   N+S K+ L EFRV +      VG       F  G  VDV+ +T GKG++G +
Sbjct: 65  QAVFFKRNNLSYKRTLKEFRVSEVAG-FSVGHEIKADAFKAGDYVDVSAVTKGKGYAGVI 123

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHNFG    +HG S   RS GS+G  Q P +V K  KM+G MG   VTV+ L +V+VD 
Sbjct: 124 KRHNFGMQPVSHGQSDRTRSRGSSGA-QGPQKVLKGLKMSGHMGNEYVTVQKLLIVNVDA 182

Query: 185 KRGLILVKGCVPGAKKNSWIL 205
           ++ ++L+KG VP A + +  +
Sbjct: 183 EKNVLLIKGSVPSANRGTLFI 203


>gi|302388712|ref|YP_003824533.1| LSU ribosomal protein L3P [Thermosediminibacter oceani DSM 16646]
 gi|302199340|gb|ADL06910.1| LSU ribosomal protein L3P [Thermosediminibacter oceani DSM 16646]
          Length = 209

 Score =  154 bits (389), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 89/208 (42%), Positives = 129/208 (62%), Gaps = 4/208 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++  KLGMT +++  G+ +PVTV+    C V+  +T + +GY A++VG  + K   ++KP
Sbjct: 6   ILGIKLGMTQIFDEAGQAVPVTVVEAGPCVVMQKKTPEIDGYSALKVGFVDVKEHRLTKP 65

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + G F    + PKK + E ++ + D    VG       F  G+ VDVTG++IGKGF+G +
Sbjct: 66  VLGQFRKYQLKPKKYIRELKIDEVDKY-NVGDEIKVDIFKPGERVDVTGISIGKGFAGGV 124

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR NF     +HG S+ HR  GS G   DP RVFK KKM G +G  RVTV+NLE+V VD 
Sbjct: 125 KRWNFNRGPMSHG-SMYHRRPGSGGA-TDPERVFKGKKMPGHLGHERVTVQNLEIVKVDP 182

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +R L+L+KG VPG KK S + ++ + KS
Sbjct: 183 ERNLLLIKGSVPGTKK-SLLYIKSTVKS 209


>gi|270157910|ref|ZP_06186567.1| ribosomal protein L3 [Legionella longbeachae D-4968]
 gi|289163830|ref|YP_003453968.1| 50S ribosomal subunit protein L3 [Legionella longbeachae NSW150]
 gi|269989935|gb|EEZ96189.1| ribosomal protein L3 [Legionella longbeachae D-4968]
 gi|288857003|emb|CBJ10817.1| 50S ribosomal subunit protein L3 [Legionella longbeachae NSW150]
          Length = 216

 Score =  154 bits (389), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 92/199 (46%), Positives = 123/199 (61%), Gaps = 2/199 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  +G  +PV+V+ +   +V   +T+  +GY A+Q+  G  K   
Sbjct: 1   MMIGLLGRKIGMTRVFMADGVSVPVSVVEVHPNRVSQVKTITTDGYSAIQLTGGAKKPGK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G F+   +     L EF V  +D     G V S    FT GQ VDV+G T GKG
Sbjct: 61  VNKPLTGHFAKAEIEAGDMLVEFPVDSEDKFT-AGQVISITDVFTAGQFVDVSGTTKGKG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KR+NF    ATHG S SHR  GS G  Q PGRVFK KKMAG MG  R TV++LE+
Sbjct: 120 FAGTVKRYNFRTQDATHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNVRCTVQSLEL 179

Query: 180 VSVDDKRGLILVKGCVPGA 198
           V VD +R L+L+KG +PGA
Sbjct: 180 VRVDAERNLLLIKGAIPGA 198


>gi|118579119|ref|YP_900369.1| 50S ribosomal protein L3 [Pelobacter propionicus DSM 2379]
 gi|166233173|sp|A1ALU1|RL3_PELPD RecName: Full=50S ribosomal protein L3
 gi|118501829|gb|ABK98311.1| LSU ribosomal protein L3P [Pelobacter propionicus DSM 2379]
          Length = 209

 Score =  154 bits (389), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 85/201 (42%), Positives = 121/201 (60%), Gaps = 3/201 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT ++  +G R+PVTV+    C V   +T   +GY AVQVG       N SKPM G  + 
Sbjct: 12  MTQIFTEDGTRVPVTVIQAGPCVVTQKKTASIDGYSAVQVGFDSTPAANASKPMLGHCTK 71

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
                 + L EF+     ++  +G V +   FT G  VDVTG +IGKGF G +KR+NF G
Sbjct: 72  SGQGVFRYLREFKFDAASEM-NLGDVLTVEQFTAGDFVDVTGTSIGKGFQGVIKRYNFRG 130

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
            RA+HG S  HR+ GS G    P RVFKNKKM G++G  +VT++ L+V+ VD    L+L+
Sbjct: 131 GRASHG-SRFHRAPGSIGASATPSRVFKNKKMPGQLGNTQVTMQCLQVIRVDADDNLLLI 189

Query: 192 KGCVPGAKKNSWILVRDSFKS 212
           KG +PG  +N+ +L+++S K+
Sbjct: 190 KGAIPG-HRNNIVLIKNSVKA 209


>gi|254495711|ref|ZP_05108627.1| 50S ribosomal protein L3 [Legionella drancourtii LLAP12]
 gi|254355058|gb|EET13677.1| 50S ribosomal protein L3 [Legionella drancourtii LLAP12]
          Length = 216

 Score =  154 bits (389), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 88/198 (44%), Positives = 118/198 (59%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  EG  +PV+V+ +   +V   +T++ +GY A+Q+  G  K   
Sbjct: 1   MMIGLLGRKIGMTRVFTAEGVSVPVSVVEVHPNRVSQIKTMEADGYAAIQLTGGTKKASK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+   +       EF V  +D       +     F  GQ VDV+G T GKGF
Sbjct: 61  VNKAQAGHFAKAEIEAGDMQVEFWVDSEDAFKAGQELSVADVFAAGQFVDVSGTTKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNF    ATHG S SHR  GS G  Q PGRVFK KKMAG MG  R TV++LE+V
Sbjct: 121 AGTVKRHNFRTQDATHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNVRCTVQSLELV 180

Query: 181 SVDDKRGLILVKGCVPGA 198
            VD +R L+L+KG +PGA
Sbjct: 181 RVDAERNLLLIKGAIPGA 198


>gi|238601104|ref|XP_002395321.1| hypothetical protein MPER_04643 [Moniliophthora perniciosa FA553]
 gi|215465855|gb|EEB96251.1| hypothetical protein MPER_04643 [Moniliophthora perniciosa FA553]
          Length = 259

 Score =  154 bits (389), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 93/205 (45%), Positives = 118/205 (57%), Gaps = 25/205 (12%)

Query: 30  LDNCQVVVH-RTLDKNG--YMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ 86
           LDNCQV  +  T  KN   Y AVQV A +   K  ++ MRG F    V  K+ + EF + 
Sbjct: 1   LDNCQVTANIVTARKNASEYHAVQVAASDRPFKTTTQQMRGHFRKAQVPCKRVVREFPIT 60

Query: 87  KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146
            D  + PVG+  S  +F  GQ VDV   +IGKGF+G MKR  F GLRA+HGVSISHRS G
Sbjct: 61  PDAHV-PVGTTLSAIHFVPGQFVDVIAKSIGKGFAGGMKRWGFKGLRASHGVSISHRSIG 119

Query: 147 STGCRQ--------------------DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKR 186
           +TG  Q                    +PGRV+  KKM GR+GG R+T +NL VV VD + 
Sbjct: 120 ATGAHQVLYQKDIFVAYLIDKASVSRNPGRVWPGKKMPGRLGGERITTQNLAVVRVDSEL 179

Query: 187 GLILVKGCVPGAKKNSWILVRDSFK 211
            LI VKG VPG   +S ++V+D+ K
Sbjct: 180 NLIYVKGAVPGV-DDSHVMVKDAKK 203


>gi|323700806|ref|ZP_08112718.1| 50S ribosomal protein L3 [Desulfovibrio sp. ND132]
 gi|323460738|gb|EGB16603.1| 50S ribosomal protein L3 [Desulfovibrio desulfuricans ND132]
          Length = 210

 Score =  154 bits (388), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 86/204 (42%), Positives = 120/204 (58%), Gaps = 2/204 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT ++  +G   PVTV+    C V+  +T DK GY A+Q+G      + V+K
Sbjct: 6   GLLGRKLGMTRIFKSDGTICPVTVIEAGPCAVMQIKTTDKEGYNALQLGYDTVPERKVNK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           PM+G  +    +  + L EF ++  D    +G   +   F  G+ V VTG + GKGF G 
Sbjct: 66  PMKGHMAKAGDALYRHLKEFPLEVVDGY-ELGQEITVDIFAAGEKVKVTGTSKGKGFQGV 124

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF G RA+HG    HR  GS G    PGRV+K K+MAG MG  RVT+ N+E+V V 
Sbjct: 125 MKRHNFNGSRASHGAEKVHRVPGSVGNATYPGRVWKGKRMAGHMGSERVTLSNVEIVDVR 184

Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207
            +  ++LVKG VPG   N  +++R
Sbjct: 185 PEDNVLLVKGQVPGP-NNGLVMIR 207


>gi|224537817|ref|ZP_03678356.1| hypothetical protein BACCELL_02704 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520503|gb|EEF89608.1| hypothetical protein BACCELL_02704 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 205

 Score =  154 bits (388), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 84/205 (40%), Positives = 126/205 (61%), Gaps = 3/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EG+ +P TV+    C V   ++++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKSVEKDGYAAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PKK L EF+  + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFNDVTFVDVIGTSKGKGFQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ +ATHG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
                L+L+KG VPG K +  I+ +
Sbjct: 181 LPDHNLLLIKGSVPGCKGSIVIIEK 205


>gi|261854950|ref|YP_003262233.1| 50S ribosomal protein L3 [Halothiobacillus neapolitanus c2]
 gi|261835419|gb|ACX95186.1| 50S ribosomal protein L3 [Halothiobacillus neapolitanus c2]
          Length = 214

 Score =  154 bits (388), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 94/213 (44%), Positives = 126/213 (59%), Gaps = 4/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK+GMT V++  G   PVTV+ ++  +V   +T + +GY AVQV  G  +   
Sbjct: 1   MSLGVVGRKVGMTRVFDDAGVSTPVTVIEVEPNRVTQLKTPEVDGYTAVQVTTGTRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           V+K M G ++    +  +   EFR+  D+     P G+  + S F   + VDV G + GK
Sbjct: 61  VTKAMAGHYAKAETASGRMSTEFRISADELAGFQP-GAEITVSIFDGVEKVDVAGQSKGK 119

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF+G +KR+NF    ATHG S SHR  GS G  Q PGRVF  KKM+G MG  RV+   L+
Sbjct: 120 GFAGTVKRYNFRTQDATHGNSRSHRVPGSIGQNQTPGRVFPGKKMSGHMGDERVSSLGLK 179

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           VV VD +RGLILVKG VPG+     ++VR S K
Sbjct: 180 VVRVDVERGLILVKGAVPGSTGGD-VIVRPSVK 211


>gi|188584836|ref|YP_001916381.1| LSU ribosomal protein L3P [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|226730540|sp|B2A4D9|RL3_NATTJ RecName: Full=50S ribosomal protein L3
 gi|179349523|gb|ACB83793.1| LSU ribosomal protein L3P [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 210

 Score =  154 bits (388), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT +++ EG  +PVTV+    C VV  +  D +GY AVQ+G  + K   
Sbjct: 1   MKKAILGKKVGMTQIFSEEGEVMPVTVVKAGPCSVVQKKVEDTDGYNAVQIGFEDKKENK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
             KP +G F    V+PKK L EF ++  ++ L VG   +   F VG  +DVTG +  KGF
Sbjct: 61  TKKPEKGHFEKAGVNPKKHLTEFELESMEN-LEVGQELTVEQFEVGDQIDVTGTSKSKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR        THG S  +R+ GS G   D  RVFK + + GRMGGN VTV+ LEVV
Sbjct: 120 QGTIKRFKHSTGPKTHG-SRFYRAPGSLGS-MDISRVFKGQTLPGRMGGNTVTVQRLEVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  L+LVKG VPG KK    +V DS K+
Sbjct: 178 DVDKENNLLLVKGAVPGPKKGLLKIV-DSVKA 208


>gi|42526279|ref|NP_971377.1| 50S ribosomal protein L3 [Treponema denticola ATCC 35405]
 gi|81831476|sp|Q73PN1|RL3_TREDE RecName: Full=50S ribosomal protein L3
 gi|41816391|gb|AAS11258.1| ribosomal protein L3 [Treponema denticola ATCC 35405]
 gi|325473223|gb|EGC76418.1| 50S ribosomal protein L3 [Treponema denticola F0402]
          Length = 208

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/210 (42%), Positives = 130/210 (61%), Gaps = 5/210 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++N  G  +PVTV+ ++   VV  +  +K GY +V +G GE K K+ SK
Sbjct: 3   GLIGKKIGMTQIFNEVGHLMPVTVIQVEPNTVVALKDKEKFGYSSVVLGLGELKEKHTSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G FS  ++ P K L EFR    D  + VG       F     +D+T ++ GKGF G 
Sbjct: 63  PYAGQFSG-DIKPLKLLKEFR--DFDKEVAVGDKLGVEAFEKVSYLDITAISKGKGFQGV 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR  +GG RA+HG S  HR  GSTG    PGR FKN  M GRMG ++VTV+NL++V +D
Sbjct: 120 MKRWGYGGGRASHG-SKFHREAGSTGHCTTPGRSFKNTTMPGRMGFDKVTVQNLQIVKID 178

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            + G+I+V+G VPG KK++ + ++ + K A
Sbjct: 179 PELGVIMVRGSVPG-KKDATVFLKSAVKRA 207


>gi|29348136|ref|NP_811639.1| 50S ribosomal protein L3 [Bacteroides thetaiotaomicron VPI-5482]
 gi|253569590|ref|ZP_04847000.1| 50S ribosomal protein L3 [Bacteroides sp. 1_1_6]
 gi|298386181|ref|ZP_06995738.1| 50S ribosomal protein L3 [Bacteroides sp. 1_1_14]
 gi|42559628|sp|Q8A476|RL3_BACTN RecName: Full=50S ribosomal protein L3
 gi|29340039|gb|AAO77833.1| 50S ribosomal protein L3 [Bacteroides thetaiotaomicron VPI-5482]
 gi|251841609|gb|EES69690.1| 50S ribosomal protein L3 [Bacteroides sp. 1_1_6]
 gi|298261409|gb|EFI04276.1| 50S ribosomal protein L3 [Bacteroides sp. 1_1_14]
          Length = 205

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 82/203 (40%), Positives = 125/203 (61%), Gaps = 3/203 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PK+ L EF+  + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKRAGVTPKRHLAEFK--EFETELNLGDTITVEMFNDATFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ +ATHG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205
                L+L+KG +PG K +  I+
Sbjct: 181 IADHNLLLIKGSIPGCKGSIVII 203


>gi|319893200|ref|YP_004150075.1| LSU ribosomal protein L3p (L3e) [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317162896|gb|ADV06439.1| LSU ribosomal protein L3p (L3e) [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323463752|gb|ADX75905.1| ribosomal protein L3 [Staphylococcus pseudintermedius ED99]
          Length = 219

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/220 (42%), Positives = 127/220 (57%), Gaps = 11/220 (5%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY A+Q+G        
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQIGFENKEAYK 60

Query: 53  AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
            G    K  +K   G     + +PK+ + EFR    DD   VG   S   F VG ++DVT
Sbjct: 61  KGRKTNKYATKAAEGHAKKADAAPKRFIREFRNVNVDDY-EVGQEVSVDTFEVGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G + GKGF GA+KRHN      +HG S  HR+ GS G   D  RVFK +K+ GRMGGN V
Sbjct: 120 GTSKGKGFQGAIKRHNQSRGPMSHG-SHFHRAPGSIGMASDASRVFKGQKLPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           TV+NLEVV VD +  +ILVKG VPG KK  ++ ++ + K+
Sbjct: 179 TVQNLEVVQVDTENNVILVKGNVPGPKK-GFVQIQSAIKA 217


>gi|218961433|ref|YP_001741208.1| 50S ribosomal subunit protein L3 [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730090|emb|CAO81002.1| 50S ribosomal subunit protein L3 [Candidatus Cloacamonas
           acidaminovorans]
          Length = 210

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/206 (40%), Positives = 122/206 (59%), Gaps = 3/206 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ IPVTV+    C+V+  RT  +NGY A+Q+G  E   + VSK
Sbjct: 3   GLIGKKIGMTQVFDSDGKVIPVTVIKAGPCKVICKRTEAENGYEAIQIGYEEIPARKVSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           P++G F   N    + + EFR      +  + +G       F   + V V+  + G+GF+
Sbjct: 63  PLQGHFKKYNSPFYRYVREFRPSYGQHIESVQIGDELKADIFGENETVSVSANSKGRGFT 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNFGG  ++HG   S R  GS G    P RVFK  KMAG+ G  +VTV +L+V+ 
Sbjct: 123 GVMKRHNFGGFISSHGSHESFRGPGSIGQCAQPSRVFKGMKMAGQYGNTKVTVHHLKVIK 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           VD +  LI+VKG VPG  +NS + + 
Sbjct: 183 VDPENNLIMVKGAVPG-HRNSLVTIH 207


>gi|239825693|ref|YP_002948317.1| 50S ribosomal protein L3 [Geobacillus sp. WCH70]
 gi|259646548|sp|C5D3R7|RL3_GEOSW RecName: Full=50S ribosomal protein L3
 gi|239805986|gb|ACS23051.1| ribosomal protein L3 [Geobacillus sp. WCH70]
          Length = 211

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/219 (42%), Positives = 128/219 (58%), Gaps = 8/219 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++K+GY A+Q+G  +   K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTIEKDGYEAIQLGFEDISEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP  G  +  N +PK+ + E R    D+   VG       F  G +VDVTG++ GKGF
Sbjct: 61  ANKPQIGHAAKANTAPKRFIREIRGANIDEY-EVGQEVKVDIFAEGDIVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    P RVFK+K++ GRMGG RVT++NL++V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGAIA-PNRVFKSKELPGRMGGQRVTIQNLKIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            VD +R L+L+KG VPG +K   I+     KSAV  K K
Sbjct: 178 KVDPERNLLLIKGNVPGPRKGLVIV-----KSAVKAKAK 211


>gi|218245140|ref|YP_002370511.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 8801]
 gi|257058165|ref|YP_003136053.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 8802]
 gi|226725160|sp|B7K335|RL3_CYAP8 RecName: Full=50S ribosomal protein L3
 gi|218165618|gb|ACK64355.1| ribosomal protein L3 [Cyanothece sp. PCC 8801]
 gi|256588331|gb|ACU99217.1| ribosomal protein L3 [Cyanothece sp. PCC 8802]
          Length = 212

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 86/198 (43%), Positives = 117/198 (59%), Gaps = 3/198 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT +++ E G  IPVTV+    C V   +T D +GY A+QVG  E K K
Sbjct: 1   MAVGILGTKLGMTQIFDQETGMAIPVTVVQAGPCTVTQVKTPDTDGYTAIQVGYHEVKEK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++K   G    ++  P + L E+R+  D     +G       F  G LVDV+G ++G+G
Sbjct: 61  ALTKAEIGHLKKIDAPPLRHLKEYRLD-DSSQYQLGDAIKADIFNPGDLVDVSGKSMGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G  KRHNF     THG S +HR  GSTG    PGRV+  K+MAG+ G  +VT+++L V
Sbjct: 120 FAGYQKRHNFKRGNMTHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGQYGATQVTIRHLTV 178

Query: 180 VSVDDKRGLILVKGCVPG 197
           V VD  R LILVKG +PG
Sbjct: 179 VRVDSDRNLILVKGAIPG 196


>gi|311070763|ref|YP_003975686.1| 50S ribosomal protein L3 [Bacillus atrophaeus 1942]
 gi|310871280|gb|ADP34755.1| 50S ribosomal protein L3 [Bacillus atrophaeus 1942]
          Length = 209

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 129/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVIEAAANVVLQKKTAENDGYEAIQLGFDDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    +PK+ + E R   + D   VG       F+ G++VDVTG++ GKGF
Sbjct: 61  SNKPEKGHVAKAETAPKRFVKELR-GVEMDAYEVGQEVKVEIFSAGEIVDVTGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH       +HG S  HR  GS G   DP RVFK K + GRMGG ++TV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGP-VDPNRVFKGKLLPGRMGGEQITVQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA+K S I V+ + KS
Sbjct: 178 KVDAERNLLLIKGNVPGARK-SLITVKSAVKS 208


>gi|310779596|ref|YP_003967929.1| LSU ribosomal protein L3P [Ilyobacter polytropus DSM 2926]
 gi|309748919|gb|ADO83581.1| LSU ribosomal protein L3P [Ilyobacter polytropus DSM 2926]
          Length = 208

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           +G++A+K+GMT ++   G+ +PVTV+      V+  +T +K+GY A+Q+G  E K KN +
Sbjct: 2   AGILAKKIGMTQIFE-NGKFVPVTVVEAGPNFVLQKKTEEKDGYTALQLGFDEKKEKNTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KPM G F+   V P + + E +    +    +G           + VD+ G + GKG +G
Sbjct: 61  KPMMGIFNKAGVKPLRFVRELKADSVEGY-ELGQEIKVDILDGVEFVDIKGTSKGKGTAG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF G RATHGVS +HR  GS G    P +V K  KMAGR G   VTV+NL+VV V
Sbjct: 120 VMKRHNFSGNRATHGVSRNHRLGGSIGQSSFPSKVLKGLKMAGRYGNAAVTVQNLKVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D +  L+L+KG VPG  KN +I+V+ + K
Sbjct: 180 DVENNLLLIKGAVPGP-KNGYIVVKPAIK 207


>gi|189465418|ref|ZP_03014203.1| hypothetical protein BACINT_01771 [Bacteroides intestinalis DSM
           17393]
 gi|189437692|gb|EDV06677.1| hypothetical protein BACINT_01771 [Bacteroides intestinalis DSM
           17393]
          Length = 205

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/205 (40%), Positives = 125/205 (60%), Gaps = 3/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EG+ +P TV+    C V   ++++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKSVEKDGYAAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PKK L EF+  + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFNDATFVDVIGTSKGKGFQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ + THG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
                L+L+KG VPG K +  I+ +
Sbjct: 181 LPDHNLLLIKGSVPGCKGSIVIIEK 205


>gi|86610028|ref|YP_478790.1| 50S ribosomal protein L3 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|109893564|sp|Q2JIM7|RL3_SYNJB RecName: Full=50S ribosomal protein L3
 gi|86558570|gb|ABD03527.1| ribosomal protein L3 [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 214

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 84/200 (42%), Positives = 123/200 (61%), Gaps = 3/200 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT +++ EG  IPVTV+    C V   +T   +GY A+Q+G      K+
Sbjct: 1   MALGILGRKVGMTQIFSPEGLAIPVTVVQAGPCTVTQIKTQATDGYNAIQLGYLPTAEKH 60

Query: 61  VSKPMRGFFSSVNVSPK-KKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +++  RG  +   V+   + L EFRV + +    +G   +   F+ GQLVDV G +IG+G
Sbjct: 61  LTRAQRGHLTKAGVTELLRHLREFRVDQPEAYQ-LGQKITVEMFSPGQLVDVAGTSIGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G  KRH+FG    +HG S +HR  GS G    PGRVF   +MAGR+GG RVT + L++
Sbjct: 120 FAGYQKRHHFGRGPMSHG-SKNHRRPGSIGAGTTPGRVFPGMRMAGRLGGGRVTTRKLQL 178

Query: 180 VSVDDKRGLILVKGCVPGAK 199
           V VD +R L+++KGCVPG +
Sbjct: 179 VQVDPERDLLVIKGCVPGVE 198


>gi|87124962|ref|ZP_01080809.1| 50S ribosomal protein L3 [Synechococcus sp. RS9917]
 gi|86167282|gb|EAQ68542.1| 50S ribosomal protein L3 [Synechococcus sp. RS9917]
          Length = 218

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 81/211 (38%), Positives = 130/211 (61%), Gaps = 7/211 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +G+ +PVT++    C++   +T + +GY AVQ+G G+ + K 
Sbjct: 1   MSIGILGKKLGMSQLFDEQGKAVPVTLIEAGPCRITQLKTTETDGYAAVQIGFGDTREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           V+KP +G  +       + L E+RV   DD+  L +G   +   F  GQ VDV+G ++G+
Sbjct: 61  VNKPAKGHLAKSGEELLRHLSEYRV---DDVAGLELGGAITVGDFEAGQKVDVSGDSMGR 117

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF+G  KRH F     THG S +HR  GSTG    PGR++  K+MAGR GG ++T + L 
Sbjct: 118 GFAGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLT 176

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           ++ +D +R L++VKG VPG K  S + +R +
Sbjct: 177 ILKIDSERNLLVVKGSVPG-KPGSLLNIRPA 206


>gi|71891975|ref|YP_277705.1| 50S ribosomal subunit protein L3 [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|109893412|sp|Q493K8|RL3_BLOPB RecName: Full=50S ribosomal protein L3
 gi|71796081|gb|AAZ40832.1| 50S ribosomal subunit protein L3 [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 217

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/196 (42%), Positives = 126/196 (64%), Gaps = 1/196 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT +++ +G  IPVT++ +   +V   + ++ +GY AVQV  G    K++++
Sbjct: 3   GLIGQKLGMTRLFDKDGVSIPVTMIEITPHRVTQIKNIENDGYCAVQVTTGMKNFKHINR 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P  G      V   + ++EFR ++     L +G + +   F   + VD+TG++ GKGF+G
Sbjct: 63  PETGHMIKSGVDAGRGVWEFRCEEAGMPQLSLGDIITIQIFKNVKKVDITGISKGKGFAG 122

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    A+HG S+SHR+ GS G  Q PGRVFK KKMAG++G  +VTV+NL+VV+V
Sbjct: 123 TIKRWNFHMQDASHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGQLGNYKVTVQNLDVVNV 182

Query: 183 DDKRGLILVKGCVPGA 198
           D K  L+LVKG VPG 
Sbjct: 183 DVKLNLLLVKGAVPGT 198


>gi|83591276|ref|YP_431285.1| 50S ribosomal protein L3 [Moorella thermoacetica ATCC 39073]
 gi|109893524|sp|Q2RFP7|RL3_MOOTA RecName: Full=50S ribosomal protein L3
 gi|83574190|gb|ABC20742.1| LSU ribosomal protein L3P [Moorella thermoacetica ATCC 39073]
          Length = 209

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 86/211 (40%), Positives = 129/211 (61%), Gaps = 4/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR G++ +K+GMT V++  GR IPVTV+    C V+  +    +GY AVQVG    K + 
Sbjct: 1   MRKGILGKKIGMTQVFDETGRAIPVTVIQAGPCVVIRKKETSTDGYDAVQVGFEPVKERK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP+ G+F+   V+P + + EFR++   +   VG       F+ G+ VDVTG++ GKGF
Sbjct: 61  VNKPLLGYFNKAGVTPFRYIREFRLENSGEYQ-VGQEIKADVFSPGEKVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH F      HG S  HR  GS   +  P RVFK +++ G +G  RVTV+ LEVV
Sbjct: 120 AGGIKRHGFHRGPMEHG-SKYHRRPGSLAAK-GPARVFKGRRLPGHLGAVRVTVQGLEVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D +R L+L+KG VPG  ++  +++++S K
Sbjct: 178 RNDPERNLLLIKGSVPGP-RHGLLVIKNSVK 207


>gi|158337810|ref|YP_001518986.1| 50S ribosomal protein L3 [Acaryochloris marina MBIC11017]
 gi|189042827|sp|B0C1D3|RL3_ACAM1 RecName: Full=50S ribosomal protein L3
 gi|158308051|gb|ABW29668.1| 50S ribosomal protein L3 [Acaryochloris marina MBIC11017]
          Length = 212

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 82/197 (41%), Positives = 118/197 (59%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT V++  GR IPVTV+    C V   +T   +GY A+Q+G G    K 
Sbjct: 1   MSVGILGTKLGMTQVFDEAGRAIPVTVVQAGPCPVTQIKTAQTDGYTAIQIGYGSTTEKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G       +P + L E+R+  D     +G   S   F+ GQLVD++G +IG+GF
Sbjct: 61  LTRPELGHLKKSGSTPVRHLQEYRL-ADVSEYELGQSISADLFSEGQLVDISGTSIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRHNF      HG S +HR+ GSTG    PGR++  K+MAG+MG  + T++ L VV
Sbjct: 120 AGYQKRHNFRRGPMGHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGQMGNVKKTIRKLTVV 178

Query: 181 SVDDKRGLILVKGCVPG 197
            VD +R ++L+KG VPG
Sbjct: 179 RVDAERNVLLIKGSVPG 195


>gi|150015043|ref|YP_001307297.1| 50S ribosomal protein L3 [Clostridium beijerinckii NCIMB 8052]
 gi|189042837|sp|A6LPR1|RL3_CLOB8 RecName: Full=50S ribosomal protein L3
 gi|149901508|gb|ABR32341.1| ribosomal protein L3 [Clostridium beijerinckii NCIMB 8052]
          Length = 209

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 86/212 (40%), Positives = 128/212 (60%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ RK+GMT +++ +G+ IPVTV+    C VV  +TL+ +GY A+QVG  E + K 
Sbjct: 1   MKKAIIGRKVGMTQIFDEKGKVIPVTVVEAGPCVVVQKKTLENDGYEAIQVGFDEIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G F+    + ++ L EFR+  D     VG+      F  G  VDV+ ++ GKGF
Sbjct: 61  ANKPRKGHFAKAGATLRRTLKEFRLD-DISQYEVGNEIKADVFGAGDKVDVSAVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G++KR N      THG S  HR+ GS G   DP R FKNK+M G MG    TV NLEVV
Sbjct: 120 QGSIKRWNQQRGPMTHG-SKFHRAPGSMGASSDPSRTFKNKRMPGHMGSVNTTVLNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ LIL+KG +PG  K + ++++D+ ++
Sbjct: 179 KVIAEKNLILIKGGIPGPNKGT-VVIKDTVRA 209


>gi|153872677|ref|ZP_02001498.1| Ribosomal protein L3 [Beggiatoa sp. PS]
 gi|152070858|gb|EDN68503.1| Ribosomal protein L3 [Beggiatoa sp. PS]
          Length = 213

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/213 (42%), Positives = 130/213 (61%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G+V  K GMT +++   G  IPVTV+     ++   +T   +GY A+QV +     K
Sbjct: 1   MALGIVGIKCGMTRLFDTAAGDVIPVTVIKAPPNRITQIKTQIHDGYQAIQVTSPLKVPK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           +++KP++G  +  +VS     +EFR+  D    L +G     + F  GQ VDVTG+T GK
Sbjct: 61  HINKPIKGHLAKASVSTGFGFWEFRLANDTLKELKLGGEIDVTLFVTGQNVDVTGVTKGK 120

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF+G +KRH+F    ATHG S+SHR+ GS G  Q PGRVFK KKMAG +G  R TV+NL 
Sbjct: 121 GFAGVVKRHHFRTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHLGCQRRTVQNLT 180

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           ++ V  ++ L+L+KG VPGA  N  ++VR + K
Sbjct: 181 IMRVIAEKNLLLIKGAVPGA-PNGTVIVRPAIK 212


>gi|330837655|ref|YP_004412296.1| 50S ribosomal protein L3P [Spirochaeta coccoides DSM 17374]
 gi|329749558|gb|AEC02914.1| LSU ribosomal protein L3P [Spirochaeta coccoides DSM 17374]
          Length = 206

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/208 (44%), Positives = 122/208 (58%), Gaps = 5/208 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EGR  PVTV+ ++   VV  RT +KNGY A  +GA + K   V+K
Sbjct: 3   GLIGKKIGMTQVFDAEGRLTPVTVIKIEGNVVVADRTEEKNGYNAALLGAIDKKKSRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+ K+ L EFR    D  + VG V     F     VDVTG T GKGF G 
Sbjct: 63  PYAGQFPE-GVAVKRNLVEFR--DFDKEVSVGEVLGVDLFKDIAFVDVTGTTKGKGFQGG 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G RA+HG S  HR  G T     P   FK  +MAG MG  R TV+NL VV VD
Sbjct: 120 MKRHGFAGGRASHG-SKFHRDIGGTAMSTTPAHTFKGHRMAGHMGFERTTVQNLRVVRVD 178

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
           ++  +++VKG +PG  + S ++V+ + K
Sbjct: 179 EELQVLMVKGAIPGPAQ-SVVIVKKAVK 205


>gi|307718206|ref|YP_003873738.1| 50S ribosomal protein L3 [Spirochaeta thermophila DSM 6192]
 gi|306531931|gb|ADN01465.1| 50S ribosomal protein L3 [Spirochaeta thermophila DSM 6192]
          Length = 208

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/204 (45%), Positives = 121/204 (59%), Gaps = 3/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+ RKLGMT V++  G  +PVTV+ ++   VV  RT +++GY A+ +GA   K     K
Sbjct: 3   GVIGRKLGMTQVFDANGYVVPVTVIKVEKNTVVDVRTPERHGYRALVLGAFPLKASRAVK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    + PKK L E R   + D  P G       F   + VDV G++ GKG+ G 
Sbjct: 63  PYLGQFQKRGLEPKKVLREIR-DFEGDYKP-GDEIGVEIFEGVRFVDVRGLSKGKGYQGV 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G  A+HG S  HR+HGSTG    P +V K  KMAGRMGG +V V+NL +V VD
Sbjct: 121 MKRHGFSGGPASHG-SKFHRAHGSTGQSAYPSKVLKGTKMAGRMGGVQVCVQNLRIVEVD 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207
            +RG +LV+G VPG +K   I+ R
Sbjct: 180 KERGCLLVEGAVPGPRKGVVIVTR 203


>gi|154505169|ref|ZP_02041907.1| hypothetical protein RUMGNA_02682 [Ruminococcus gnavus ATCC 29149]
 gi|153794648|gb|EDN77068.1| hypothetical protein RUMGNA_02682 [Ruminococcus gnavus ATCC 29149]
          Length = 242

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/229 (41%), Positives = 129/229 (56%), Gaps = 20/229 (8%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M+  ++A K+GMT ++N E G  IPVTVL    C V   +T++ +GY AVQVG  + K K
Sbjct: 16  MKKAILATKVGMTQIFNEETGVLIPVTVLQAGPCVVTQVKTVENDGYKAVQVGFVDKKEK 75

Query: 60  ----------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
                            V+K  +G F    VS K+ + EFR +  ++   +        F
Sbjct: 76  IVTKDKSGKKEIAHRNGVTKAEKGHFDKAGVSGKRYVKEFRFENAEEYT-LAQEIKADIF 134

Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
             G  VD T ++ GKGF GA+KRHN      THG S  HR  GS G   DP +VFK KKM
Sbjct: 135 AAGDKVDATAISKGKGFQGAIKRHNQSRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKM 193

Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            G+MGG ++TV+NLEVV VD +  L+LVKG VPG KK S I ++++ K+
Sbjct: 194 PGQMGGKKITVQNLEVVRVDAENNLLLVKGSVPGPKK-SLITIKETVKA 241


>gi|33862114|ref|NP_893675.1| 50S ribosomal protein L3 [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|42559598|sp|Q7UZU7|RL3_PROMP RecName: Full=50S ribosomal protein L3
 gi|33634332|emb|CAE20017.1| 50S ribosomal protein L3 [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 217

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 80/197 (40%), Positives = 125/197 (63%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +G  +PVT++    C+V   +T   +GY A+Q+G G +K K+
Sbjct: 1   MSIGILGKKLGMSQLFDKDGNAVPVTLIEAGPCRVTQLKTQPLDGYTAIQIGYGVSKDKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SKP +G          K L E+RV+++     +G   + + F VGQ VD++G ++G+GF
Sbjct: 61  LSKPEKGHLLKSGEILLKHLKEYRVEENSSY-EIGKEITVTNFEVGQKVDISGKSMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRH F     +HG S +HR+ GSTG    PGR++  K+MAGR GG ++T K L VV
Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKKITTKGLLVV 178

Query: 181 SVDDKRGLILVKGCVPG 197
            +DD++ L++VKG VPG
Sbjct: 179 KIDDQKNLLVVKGSVPG 195


>gi|289550143|ref|YP_003471047.1| LSU ribosomal protein L3p (L3e) [Staphylococcus lugdunensis
           HKU09-01]
 gi|289179675|gb|ADC86920.1| LSU ribosomal protein L3p (L3e) [Staphylococcus lugdunensis
           HKU09-01]
          Length = 220

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/219 (42%), Positives = 124/219 (56%), Gaps = 11/219 (5%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+QVG  + +   
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60

Query: 59  ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
                 K  +KP  G       +PK+ + EFR   + D   VG   S   F  G ++DVT
Sbjct: 61  KDAKSNKYATKPAEGHAKKAGTAPKRFIREFR-NVNVDEYEVGQEVSVDTFEAGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH        HG S  HR+ GS G   D  RVFK +K  GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMAHG-SHFHRAPGSVGMASDASRVFKGQKAPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           TV+NLEVV VD + G+ILVKG VPGAKK   + ++ S K
Sbjct: 179 TVQNLEVVQVDTENGVILVKGNVPGAKK-GLVEIKSSIK 216


>gi|296333113|ref|ZP_06875567.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305672815|ref|YP_003864486.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296149729|gb|EFG90624.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305411058|gb|ADM36176.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 209

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 129/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  ++ + +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKSTENDGYEAIQLGFDDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    +PK+ + E R   + D   VG       F+ G++VDVTG++ GKGF
Sbjct: 61  SNKPEKGHVAKAETAPKRFVKELR-GVEMDAYEVGQEVKVEIFSAGEIVDVTGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH       +HG S  HR  GS G   DP RVFK K + GRMGG ++TV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGP-VDPNRVFKGKLLPGRMGGEQITVQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGAKK S I V+ + KS
Sbjct: 178 KVDAERNLLLIKGNVPGAKK-SLITVKSAVKS 208


>gi|283767342|ref|ZP_06340257.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus H19]
 gi|283461221|gb|EFC08305.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus H19]
          Length = 220

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/219 (43%), Positives = 124/219 (56%), Gaps = 11/219 (5%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY A+QVG        
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEAKENLVLQKKTVEVDGYNAIQVGFEDKKAYK 60

Query: 53  AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
                 K  +KP  G     + +PK+ + EFR   D D   VG   S   F  G ++DVT
Sbjct: 61  KDAKSNKYANKPAEGHAKKADAAPKRFIREFR-NVDVDAYEVGQEVSVDTFVAGDVIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH       +HG S  HR+ GS G   D  RVFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQSRGPMSHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           TV+NLEVV VD +  +ILVKG VPG KK   + +R S K
Sbjct: 179 TVQNLEVVQVDTENKVILVKGNVPGPKK-GLVEIRTSIK 216


>gi|238018623|ref|ZP_04599049.1| hypothetical protein VEIDISOL_00458 [Veillonella dispar ATCC 17748]
 gi|237865094|gb|EEP66384.1| hypothetical protein VEIDISOL_00458 [Veillonella dispar ATCC 17748]
          Length = 213

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/213 (45%), Positives = 131/213 (61%), Gaps = 5/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ +KLGMT V+  EG+ +PVTV+      VV  +T++ +GY AVQ+G G  K K+
Sbjct: 1   MSKAILGKKLGMTQVFTAEGQLVPVTVVETTPSVVVRVKTVETDGYEAVQIGYGSIKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP++G F    V+P K L E RV    D   VG   +   F  G+LVDV G   GKGF
Sbjct: 61  LTKPVKGQFDKAGVAPVKYLREVRVANAADYT-VGQTLAADIFAEGELVDVVGTGKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTG--CRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KRHNF     THG S SHR  GS G       G+V+K KK+ G+MGG RVTV+ L 
Sbjct: 120 AGTIKRHNFSRGPETHG-SKSHREPGSIGPMISGGGGKVYKGKKLPGQMGGYRVTVQRLS 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V  VD +R L+LVKG +PGA K S ++VR++ K
Sbjct: 179 VEKVDAERNLLLVKGGIPGA-KGSLVMVRNTVK 210


>gi|145588242|ref|YP_001154839.1| ribosomal protein L3 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189042856|sp|A4SUW1|RL3_POLSQ RecName: Full=50S ribosomal protein L3
 gi|145046648|gb|ABP33275.1| LSU ribosomal protein L3P [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 218

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/207 (40%), Positives = 124/207 (59%), Gaps = 2/207 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  EG  IPVTV+ + + ++   +T   +GY A+Q+  G  +   
Sbjct: 1   MSLGLIGRKVGMTRLFTDEGDSIPVTVIDVSDNRIAQIKTQATDGYDAIQLAHGTRRATR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQ--KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           V+K M G F+   V     L EF++   K  ++ P   + + + FT GQ VDV G++IGK
Sbjct: 61  VTKAMAGHFAKAGVMAGNGLNEFQLDAAKIAEMTPGQVIPADTAFTAGQKVDVQGVSIGK 120

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           G++G +KR++F   RA+HG S SH   GS G  QDPGRVF  K+M G +G    TV+NL 
Sbjct: 121 GYAGTIKRYHFASGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTRTVQNLV 180

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWIL 205
           +  +D +R LI+VKG +PGA     I+
Sbjct: 181 IARIDAERNLIMVKGAIPGAPGGKVIV 207


>gi|183601944|ref|ZP_02963313.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219682857|ref|YP_002469240.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|241190433|ref|YP_002967827.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241195839|ref|YP_002969394.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|183218829|gb|EDT89471.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219620507|gb|ACL28664.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|240248825|gb|ACS45765.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250393|gb|ACS47332.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|289178157|gb|ADC85403.1| LSU ribosomal protein L3P [Bifidobacterium animalis subsp. lactis
           BB-12]
 gi|295793420|gb|ADG32955.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis
           V9]
          Length = 216

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 123/212 (58%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+ ++ +KLGM+ V++  G  +PVT++ +    V   +  + +GY AVQ+G G+   + V
Sbjct: 7   RNALLGKKLGMSQVWDENGFFVPVTLVEVSTNVVTAVKNEETDGYKAVQLGYGQVDPRKV 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KPM G F+   V+P++ L E R +  +D  P G   +   F  G  VDVTG T GKGF+
Sbjct: 67  TKPMAGHFAKAGVTPRRHLAEVRTENVEDFEP-GQELTAEVFPEGVQVDVTGTTKGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F   R THG   + R  GS G    P R+ K K+MAGRMG    TV+NL VVS
Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTNTVQNLTVVS 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D + G++ +KG +PG  K   +LVR + K A
Sbjct: 186 SDVENGILAIKGAIPGP-KGGIVLVRSAVKGA 216


>gi|313158234|gb|EFR57636.1| 50S ribosomal protein L3 [Alistipes sp. HGB5]
          Length = 204

 Score =  153 bits (387), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 84/198 (42%), Positives = 117/198 (59%), Gaps = 4/198 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT VY+ EG+ IP TV+    C V   +T++K+ Y AVQ+   E   K+ S
Sbjct: 2   SGLIGKKIGMTSVYSAEGKNIPCTVIEAGPCVVTQIKTVEKDTYEAVQIAYDEKSEKHTS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
             + G F     +PK+K+ EF+   + +L   G   +   F+    VDVTG++ GKGF G
Sbjct: 62  SSLLGHFKKAGTTPKRKMAEFKGMPEVNL---GDTLTVELFSEEDWVDVTGISKGKGFQG 118

Query: 123 AMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG+   THG     R  GS G    P RVFK K++ G+MGG +V V NL V+ 
Sbjct: 119 VVKRHGFGGVGGQTHGQHNRQRKPGSLGASSYPSRVFKGKRLPGQMGGEQVKVLNLRVLK 178

Query: 182 VDDKRGLILVKGCVPGAK 199
           V  +  LILVKG +PGAK
Sbjct: 179 VIPESNLILVKGSIPGAK 196


>gi|149179414|ref|ZP_01857968.1| 50S ribosomal protein L3 [Planctomyces maris DSM 8797]
 gi|148841725|gb|EDL56134.1| 50S ribosomal protein L3 [Planctomyces maris DSM 8797]
          Length = 229

 Score =  153 bits (387), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 126/224 (56%), Gaps = 20/224 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT +Y+ +G  +PVTV+    C V+  RTLD +GY AVQVG  +   + 
Sbjct: 1   MPVGLLGKKVGMTQIYD-DGVMVPVTVIQAGPCHVLQVRTLDTDGYEAVQVGFEDKPRRL 59

Query: 61  VSKPMRGFFSSVN-------------------VSPKKKLFEFRVQKDDDLLPVGSVFSPS 101
            ++  RG  ++++                     PK+ + EFR   +D    VG   + S
Sbjct: 60  AARSERGHVAALDSKRQKKRAESGVAVVDKAGCEPKRFVKEFRTDGEDHGCEVGGELTVS 119

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F     +DV G + G+GF+G MKRHNF G RATHGV   HR  GS G   DP RV K  
Sbjct: 120 VFADVPFIDVIGTSKGRGFAGVMKRHNFSGQRATHGVKRVHRHGGSIGMSADPSRVLKGT 179

Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWIL 205
           +M GR GG ++TV++L+VV VD++ G++LV+G VPG      ++
Sbjct: 180 RMGGRYGGKQITVRHLKVVRVDEENGVLLVRGAVPGPNGGDLVI 223


>gi|15925240|ref|NP_372774.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927830|ref|NP_375363.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus N315]
 gi|21283898|ref|NP_646986.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MW2]
 gi|49484466|ref|YP_041690.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49487032|ref|YP_044253.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|82751839|ref|YP_417580.1| 50S ribosomal protein L3 [Staphylococcus aureus RF122]
 gi|87161988|ref|YP_494839.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88196162|ref|YP_500979.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|150394755|ref|YP_001317430.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus JH1]
 gi|151222364|ref|YP_001333186.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156980565|ref|YP_001442824.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus Mu3]
 gi|161353538|ref|YP_187049.2| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus COL]
 gi|221140148|ref|ZP_03564641.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253317010|ref|ZP_04840223.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253729916|ref|ZP_04864081.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253734341|ref|ZP_04868506.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|255007030|ref|ZP_05145631.2| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257423735|ref|ZP_05600164.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257426413|ref|ZP_05602815.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257429052|ref|ZP_05605439.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus 68-397]
 gi|257431698|ref|ZP_05608061.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257434659|ref|ZP_05610710.1| LSU ribosomal protein L3 [Staphylococcus aureus subsp. aureus M876]
 gi|257794596|ref|ZP_05643575.1| 50S ribosomal protein L3 [Staphylococcus aureus A9781]
 gi|258408802|ref|ZP_05681086.1| 50S ribosomal protein L3 [Staphylococcus aureus A9763]
 gi|258422401|ref|ZP_05685313.1| LSU ribosomal protein L3 [Staphylococcus aureus A9719]
 gi|258422697|ref|ZP_05685602.1| LSU ribosomal protein L3 [Staphylococcus aureus A9635]
 gi|258439790|ref|ZP_05690536.1| 50S ribosomal protein L3 [Staphylococcus aureus A9299]
 gi|258442654|ref|ZP_05691214.1| 50S ribosomal protein L3 [Staphylococcus aureus A8115]
 gi|258446647|ref|ZP_05694802.1| 50S ribosomal protein L3 [Staphylococcus aureus A6300]
 gi|258450235|ref|ZP_05698327.1| 50S ribosomal protein L3 [Staphylococcus aureus A6224]
 gi|258450755|ref|ZP_05698814.1| 50S ribosomal protein L3 [Staphylococcus aureus A5948]
 gi|258455393|ref|ZP_05703353.1| ribosomal protein L3 [Staphylococcus aureus A5937]
 gi|262048514|ref|ZP_06021398.1| 50S ribosomal protein L3 [Staphylococcus aureus D30]
 gi|262052039|ref|ZP_06024250.1| 50S ribosomal protein L3 [Staphylococcus aureus 930918-3]
 gi|269203883|ref|YP_003283152.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ED98]
 gi|282893688|ref|ZP_06301920.1| 50S ribosomal protein L3 [Staphylococcus aureus A8117]
 gi|282902153|ref|ZP_06310046.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C160]
 gi|282906593|ref|ZP_06314441.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282909563|ref|ZP_06317374.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911810|ref|ZP_06319606.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282915099|ref|ZP_06322876.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus M899]
 gi|282917595|ref|ZP_06325347.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus D139]
 gi|282920825|ref|ZP_06328543.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C427]
 gi|282922119|ref|ZP_06329815.1| 50S ribosomal protein L3 [Staphylococcus aureus A9765]
 gi|282925730|ref|ZP_06333378.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C101]
 gi|282926796|ref|ZP_06334423.1| 50S ribosomal protein L3 [Staphylococcus aureus A10102]
 gi|283959028|ref|ZP_06376469.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|284025276|ref|ZP_06379674.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus 132]
 gi|293497503|ref|ZP_06665357.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293511078|ref|ZP_06669775.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus M809]
 gi|293549684|ref|ZP_06672356.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus M1015]
 gi|294848783|ref|ZP_06789528.1| 50S ribosomal protein L3 [Staphylococcus aureus A9754]
 gi|295404926|ref|ZP_06814739.1| 50S ribosomal protein L3 [Staphylococcus aureus A8819]
 gi|295428833|ref|ZP_06821457.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296275959|ref|ZP_06858466.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MR1]
 gi|297209937|ref|ZP_06926333.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297243984|ref|ZP_06927874.1| 50S ribosomal protein L3 [Staphylococcus aureus A8796]
 gi|297589681|ref|ZP_06948322.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MN8]
 gi|300910949|ref|ZP_07128399.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|304379434|ref|ZP_07362169.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|42559569|sp|P60448|RL3_STAAM RecName: Full=50S ribosomal protein L3
 gi|42559570|sp|P60449|RL3_STAAN RecName: Full=50S ribosomal protein L3
 gi|42559571|sp|P60450|RL3_STAAW RecName: Full=50S ribosomal protein L3
 gi|56749372|sp|Q6G771|RL3_STAAS RecName: Full=50S ribosomal protein L3
 gi|56749401|sp|Q6GEI3|RL3_STAAR RecName: Full=50S ribosomal protein L3
 gi|109893558|sp|Q2FEN9|RL3_STAA3 RecName: Full=50S ribosomal protein L3
 gi|109893559|sp|Q2YYP6|RL3_STAAB RecName: Full=50S ribosomal protein L3
 gi|123291758|sp|Q2FW06|RL3_STAA8 RecName: Full=50S ribosomal protein L3
 gi|166234598|sp|A7X5G3|RL3_STAA1 RecName: Full=50S ribosomal protein L3
 gi|172049048|sp|A6QJ92|RL3_STAAE RecName: Full=50S ribosomal protein L3
 gi|189029483|sp|A6U3X5|RL3_STAA2 RecName: Full=50S ribosomal protein L3
 gi|13702050|dbj|BAB43342.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus N315]
 gi|14248023|dbj|BAB58412.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus Mu50]
 gi|21205340|dbj|BAB96034.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MW2]
 gi|49242595|emb|CAG41316.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49245475|emb|CAG43952.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|82657370|emb|CAI81811.1| 50S ribosomal protein L3 [Staphylococcus aureus RF122]
 gi|87127962|gb|ABD22476.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203720|gb|ABD31530.1| ribosomal protein L3, putative [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|149947207|gb|ABR53143.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus JH1]
 gi|150375164|dbj|BAF68424.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156722700|dbj|BAF79117.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus Mu3]
 gi|253726363|gb|EES95092.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253727658|gb|EES96387.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257272753|gb|EEV04855.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257276044|gb|EEV07495.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257279533|gb|EEV10120.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus 68-397]
 gi|257282577|gb|EEV12709.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257285255|gb|EEV15371.1| LSU ribosomal protein L3 [Staphylococcus aureus subsp. aureus M876]
 gi|257788568|gb|EEV26908.1| 50S ribosomal protein L3 [Staphylococcus aureus A9781]
 gi|257840485|gb|EEV64945.1| 50S ribosomal protein L3 [Staphylococcus aureus A9763]
 gi|257841832|gb|EEV66269.1| LSU ribosomal protein L3 [Staphylococcus aureus A9719]
 gi|257847108|gb|EEV71117.1| LSU ribosomal protein L3 [Staphylococcus aureus A9635]
 gi|257847566|gb|EEV71568.1| 50S ribosomal protein L3 [Staphylococcus aureus A9299]
 gi|257851775|gb|EEV75709.1| 50S ribosomal protein L3 [Staphylococcus aureus A8115]
 gi|257854715|gb|EEV77663.1| 50S ribosomal protein L3 [Staphylococcus aureus A6300]
 gi|257856327|gb|EEV79236.1| 50S ribosomal protein L3 [Staphylococcus aureus A6224]
 gi|257861538|gb|EEV84340.1| 50S ribosomal protein L3 [Staphylococcus aureus A5948]
 gi|257862604|gb|EEV85372.1| ribosomal protein L3 [Staphylococcus aureus A5937]
 gi|259160094|gb|EEW45127.1| 50S ribosomal protein L3 [Staphylococcus aureus 930918-3]
 gi|259163372|gb|EEW47930.1| 50S ribosomal protein L3 [Staphylococcus aureus D30]
 gi|262076173|gb|ACY12146.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ED98]
 gi|269941839|emb|CBI50249.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus TW20]
 gi|282312559|gb|EFB42963.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C101]
 gi|282315240|gb|EFB45624.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C427]
 gi|282318557|gb|EFB48915.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus D139]
 gi|282320820|gb|EFB51154.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus M899]
 gi|282323506|gb|EFB53822.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282326542|gb|EFB56844.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282329492|gb|EFB59013.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282591247|gb|EFB96320.1| 50S ribosomal protein L3 [Staphylococcus aureus A10102]
 gi|282593587|gb|EFB98580.1| 50S ribosomal protein L3 [Staphylococcus aureus A9765]
 gi|282596612|gb|EFC01571.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C160]
 gi|282763746|gb|EFC03874.1| 50S ribosomal protein L3 [Staphylococcus aureus A8117]
 gi|283471472|emb|CAQ50683.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus ST398]
 gi|283788620|gb|EFC27447.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|285817912|gb|ADC38399.1| 50S ribosomal protein L3 [Staphylococcus aureus 04-02981]
 gi|290918731|gb|EFD95807.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus M1015]
 gi|291096434|gb|EFE26692.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466065|gb|EFF08594.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus M809]
 gi|294824162|gb|EFG40586.1| 50S ribosomal protein L3 [Staphylococcus aureus A9754]
 gi|294969871|gb|EFG45889.1| 50S ribosomal protein L3 [Staphylococcus aureus A8819]
 gi|295127182|gb|EFG56824.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296885610|gb|EFH24547.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297178762|gb|EFH38007.1| 50S ribosomal protein L3 [Staphylococcus aureus A8796]
 gi|297578192|gb|EFH96905.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MN8]
 gi|298695506|gb|ADI98728.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           ED133]
 gi|300887929|gb|EFK83124.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|302333886|gb|ADL24079.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|302752123|gb|ADL66300.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304341966|gb|EFM07870.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312437339|gb|ADQ76410.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           TCH60]
 gi|312830599|emb|CBX35441.1| 50S ribosomal protein L3 (BL3) [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315129670|gb|EFT85661.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315193502|gb|EFU23898.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           CGS00]
 gi|315198220|gb|EFU28551.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320140212|gb|EFW32071.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320143482|gb|EFW35263.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329723366|gb|EGG59895.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           21172]
 gi|329730333|gb|EGG66723.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           21193]
 gi|329732084|gb|EGG68439.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           21189]
          Length = 220

 Score =  153 bits (387), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/219 (43%), Positives = 124/219 (56%), Gaps = 11/219 (5%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY A+QVG        
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYK 60

Query: 53  AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
                 K  +KP  G     + +PK+ + EFR   D D   VG   S   F  G ++DVT
Sbjct: 61  KDAKSNKYANKPAEGHAKKADAAPKRFIREFR-NVDVDAYEVGQEVSVDTFVAGDVIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH       +HG S  HR+ GS G   D  RVFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQSRGPMSHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           TV+NLEVV VD +  +ILVKG VPG KK   + +R S K
Sbjct: 179 TVQNLEVVQVDTENKVILVKGNVPGPKK-GLVEIRTSIK 216


>gi|283796559|ref|ZP_06345712.1| 50S ribosomal protein L3 [Clostridium sp. M62/1]
 gi|291075973|gb|EFE13337.1| 50S ribosomal protein L3 [Clostridium sp. M62/1]
 gi|295092547|emb|CBK78654.1| 50S ribosomal protein L3, bacterial [Clostridium cf.
           saccharolyticum K10]
 gi|295115275|emb|CBL36122.1| 50S ribosomal protein L3, bacterial [butyrate-producing bacterium
           SM4/1]
          Length = 211

 Score =  153 bits (387), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/211 (42%), Positives = 123/211 (58%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G   PVTVL    C V   +T + +GY AVQVG  + + K 
Sbjct: 1   MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTAENDGYEAVQVGFVDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKP++G F    VS K+ + EFR +   +   V        F  G  +D T ++ GKGF
Sbjct: 61  VSKPVKGHFDKAGVSYKRYVREFRFENASEY-SVKDEIKADIFAAGDKIDATAISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    PGRVFK K M G+MG  +VT++NLE+V
Sbjct: 120 QGAIKRHGQHRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGQMGHVKVTIQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +  L+LVKG VPG KK S + ++++ K
Sbjct: 179 KVDAENNLLLVKGAVPGPKK-SLVTIKETVK 208


>gi|225010517|ref|ZP_03700988.1| ribosomal protein L3 [Flavobacteria bacterium MS024-3C]
 gi|225005346|gb|EEG43297.1| ribosomal protein L3 [Flavobacteria bacterium MS024-3C]
          Length = 205

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 85/206 (41%), Positives = 122/206 (59%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ RK+GMT +++  G+ IP TV+    C V   RT + +GY A+Q+G  +   K+V+
Sbjct: 2   SGLIGRKIGMTSIFDENGKNIPCTVIETGPCTVTQVRTEEVDGYNALQLGFDDKAEKHVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F    VS K+K+ EFR  + D    +G       F  G+ VD+   + GKGF G
Sbjct: 62  KAAAGHFKKAGVSAKRKVVEFRDFEGD--YKLGDTIGVDLFVEGEFVDIAANSKGKGFQG 119

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH F G+ +ATHG     R+ GS G    P RVFK  KMAGRMGG RV+  NL ++ 
Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGRMGGVRVSALNLRILK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L++VKGCVPG  KN+++ + 
Sbjct: 180 VVPEKNLLVVKGCVPG-HKNAYVTIE 204


>gi|319944795|ref|ZP_08019059.1| 50S ribosomal protein L3 [Lautropia mirabilis ATCC 51599]
 gi|319742044|gb|EFV94467.1| 50S ribosomal protein L3 [Lautropia mirabilis ATCC 51599]
          Length = 217

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 80/195 (41%), Positives = 117/195 (60%), Gaps = 1/195 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           M  ++  +G  IPVTV+ +   +V   ++++K+GY AVQ+  GE +   V+    G ++ 
Sbjct: 1   MMRIFTDDGESIPVTVIDVSGNRVSQVKSVEKDGYSAVQLVYGERRASRVNAAEAGHYAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
             V       EF V  +    +P G+V    +F VGQ +DV G + GKGF+G +KRHNFG
Sbjct: 61  AGVQAGTVAAEFHVSPERAAEVPAGTVLGADHFVVGQYIDVQGTSQGKGFAGTIKRHNFG 120

Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
             RA+HG S SHR  GS G  QDPGRVF  ++M+G+MG    TV+NL V  +D +RGL+L
Sbjct: 121 SQRASHGNSRSHRVPGSIGMAQDPGRVFPGQRMSGQMGNVTRTVQNLVVERIDTERGLLL 180

Query: 191 VKGCVPGAKKNSWIL 205
           V+G VPG+     ++
Sbjct: 181 VRGAVPGSAGGHLVI 195


>gi|87300913|ref|ZP_01083755.1| 50S ribosomal protein L3 [Synechococcus sp. WH 5701]
 gi|87284784|gb|EAQ76736.1| 50S ribosomal protein L3 [Synechococcus sp. WH 5701]
          Length = 215

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/211 (39%), Positives = 126/211 (59%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++  G+ IPVTV+    C++   +T   +GY A Q+G GE + K 
Sbjct: 1   MSFGILGKKLGMSQFFDPNGKSIPVTVIEAGPCRITQLKTPATDGYSAAQIGFGETRDKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP  G  +       + L E+R++  D L  +G+  +   F  GQ VDV+G T+G+GF
Sbjct: 61  VNKPAAGHLAKSGDELLRHLQEYRLESLDGL-ELGASITVEAFEAGQKVDVSGDTVGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRH F     +HG S +HR  GSTG    PGRV+  K+MAGR GG ++T + L ++
Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHREPGSTGAGTTPGRVYPGKRMAGRYGGKQITTRGLTIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L++VKG VPG K  + + +R + +
Sbjct: 179 KVDHERNLLVVKGSVPG-KPGALLSIRPALR 208


>gi|313677120|ref|YP_004055116.1| LSU ribosomal protein l3p [Marivirga tractuosa DSM 4126]
 gi|312943818|gb|ADR23008.1| LSU ribosomal protein L3P [Marivirga tractuosa DSM 4126]
          Length = 212

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/216 (39%), Positives = 123/216 (56%), Gaps = 17/216 (7%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +Y ++GR +  TV+    C V   +  + +GY A+Q+G  E K KN  
Sbjct: 2   SGIIGKKIGMTSIYGVDGRNVACTVIEAGPCVVTQVKKEETDGYSAIQLGYEERKEKNTP 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLL----------PVGSVFSPSYFTVGQLVDVT 112
           K ++G F +   +PKKKL EFR  +  D             +G VF       G  VDV 
Sbjct: 62  KALQGHFKNAQTTPKKKLAEFREYEGYDTFVDKFTLGQTVTIGDVFEE-----GDYVDVA 116

Query: 113 GMTIGKGFSGAMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
           G + GKGF G +KRH FGG+ +ATHG     R+ GS G    P RVF   +MAGR GG+R
Sbjct: 117 GSSKGKGFQGVVKRHGFGGVGQATHGQHNRQRAPGSIGGASYPARVFPGMRMAGRTGGDR 176

Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVR 207
           V   NL V+ +  ++ L+LV G +PGA KNS++++ 
Sbjct: 177 VKNTNLRVLKLIPEKNLLLVSGSIPGA-KNSFVIIE 211


>gi|312130549|ref|YP_003997889.1| lsu ribosomal protein l3p [Leadbetterella byssophila DSM 17132]
 gi|311907095|gb|ADQ17536.1| LSU ribosomal protein L3P [Leadbetterella byssophila DSM 17132]
          Length = 205

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/198 (41%), Positives = 122/198 (61%), Gaps = 3/198 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT ++N  G  +P TV+    C V   RT + +GY A+Q+G GE K K  +
Sbjct: 2   SGIIGKKIGMTTIFN-NGAAVPCTVIEAGPCVVTQVRTEETDGYNAIQLGFGEKKEKRTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K + G F   N +PK+KL EF+ + + +     ++     F  G+ VDV+G T GKGF G
Sbjct: 61  KALLGHFKKANTTPKRKLVEFK-EFEKEFALGDTIKVEDVFVEGEFVDVSGNTKGKGFQG 119

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG+ ++THG     R+ GS G    P RVFK  +MAGRMG  +VT++NL+V+ 
Sbjct: 120 VVKRHGFGGVGQSTHGQHNRLRAPGSIGACSYPARVFKGLRMAGRMGNTKVTIQNLQVLK 179

Query: 182 VDDKRGLILVKGCVPGAK 199
           +  ++ LI+V G VPG K
Sbjct: 180 LFPEKNLIIVSGSVPGGK 197


>gi|212697253|ref|ZP_03305381.1| hypothetical protein ANHYDRO_01821 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325848888|ref|ZP_08170398.1| 50S ribosomal protein L3 [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|212675702|gb|EEB35309.1| hypothetical protein ANHYDRO_01821 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325480532|gb|EGC83594.1| 50S ribosomal protein L3 [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 209

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/212 (43%), Positives = 127/212 (59%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+S +   K+GMT V + +G   PVTVL  D   +V  ++ + +GY ++QVG  + K KN
Sbjct: 1   MKS-IFTTKVGMTQVIDEDGVVTPVTVLKADENVIVQVKSEEVDGYNSIQVGYYDKKEKN 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V KP+RG F   N S K+ L E R+ +  +L P G   S   F  G+LVD+   + GKG 
Sbjct: 60  VKKPIRGHFDKANASYKRYLKEVRLSEKSELNP-GDTLSVDQFEEGELVDIVATSKGKGT 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR N+G   A+HG S SHR  G+     DP RVFK +K +G+MG  RVTV+NL+VV
Sbjct: 119 QGAIKRWNYGRGPASHG-SKSHRVAGARAAGSDPARVFKGRKGSGKMGNERVTVQNLKVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V+ +   ILVKG VPG  K   + V+ + KS
Sbjct: 178 KVNTEDSYILVKGAVPGP-KGGLVQVKQAIKS 208


>gi|86605866|ref|YP_474629.1| 50S ribosomal protein L3 [Synechococcus sp. JA-3-3Ab]
 gi|109893563|sp|Q2JV81|RL3_SYNJA RecName: Full=50S ribosomal protein L3
 gi|86554408|gb|ABC99366.1| ribosomal protein L3 [Synechococcus sp. JA-3-3Ab]
          Length = 214

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 85/200 (42%), Positives = 123/200 (61%), Gaps = 3/200 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT +++ EG  IPVTV+    C V   +T   +GY AVQ+G      K+
Sbjct: 1   MALGILGRKVGMTQIFSPEGLAIPVTVVQAGPCTVTQIKTQATDGYNAVQLGYWPTAEKH 60

Query: 61  VSKPMRGFFSSVNVSPK-KKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +++  RG  S   V+   + L EFRV + +    +G   +   F+ GQL+DV G +IG+G
Sbjct: 61  LTRAQRGHLSKAGVTELLRHLREFRVDQPEAYQ-LGQKITVEIFSPGQLLDVAGTSIGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G  KRH+FG    +HG S +HR  GS G    PGRVF   +MAGRMGG RVT++ L++
Sbjct: 120 FAGYQKRHHFGRGPMSHG-SKNHRRPGSVGAGTTPGRVFPGLRMAGRMGGCRVTIRKLQL 178

Query: 180 VSVDDKRGLILVKGCVPGAK 199
           V VD +R L+++KG VPG +
Sbjct: 179 VQVDPERNLLIIKGSVPGVE 198


>gi|121534759|ref|ZP_01666580.1| ribosomal protein L3 [Thermosinus carboxydivorans Nor1]
 gi|121306779|gb|EAX47700.1| ribosomal protein L3 [Thermosinus carboxydivorans Nor1]
          Length = 217

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/211 (45%), Positives = 132/211 (62%), Gaps = 5/211 (2%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +KLGMT ++  EG  +PVTV+      +V  +T++ +GY AVQ+G G  K K V+KP
Sbjct: 8   ILGKKLGMTQIFTAEGHLVPVTVVEAAPNVLVQRKTVETDGYNAVQLGFGAVKDKKVTKP 67

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M+G F+   V P + + E R+  + +   VG       F+ G+LVDVTG   GKGF+G +
Sbjct: 68  MKGHFAKAGVKPVRFIRELRLPSEPEFQ-VGQTIGVDIFSDGELVDVTGTGKGKGFAGGI 126

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQD--PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           KRHNF      HG S SHR  GS G R     G+VFK KK+ GRMGG+RVTV+ L VV V
Sbjct: 127 KRHNFKRGPMAHG-SKSHREPGSMGPRMSGGGGKVFKGKKLPGRMGGHRVTVQRLTVVRV 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D  R L+L+KG +PGA K S ++V+++ K A
Sbjct: 186 DKDRNLLLIKGAIPGA-KGSLVMVKNTVKPA 215


>gi|146298161|ref|YP_001192752.1| 50S ribosomal protein L3 [Flavobacterium johnsoniae UW101]
 gi|189042844|sp|A5FMY1|RL3_FLAJO RecName: Full=50S ribosomal protein L3
 gi|146152579|gb|ABQ03433.1| 50S ribosomal protein L3 [Flavobacterium johnsoniae UW101]
          Length = 205

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/210 (41%), Positives = 128/210 (60%), Gaps = 12/210 (5%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C V   RT + +GY A+Q+G  +   K+ +
Sbjct: 2   SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTNEVDGYEALQLGFDDKNEKHST 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFR----VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           K   G F       KKK+ EF+     QK  DL+ V      S F  G+ VDV G++ GK
Sbjct: 62  KAALGHFKKAGTVAKKKVVEFQDFATEQKLGDLIDV------SIFEEGEFVDVQGVSKGK 115

Query: 119 GFSGAMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           GF G +KRH FGG+ +ATHG     R+ GS G    P RVFK  +MAGRMGG+ V V+NL
Sbjct: 116 GFQGVVKRHGFGGVGQATHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGGDNVKVQNL 175

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVR 207
            V+ V  ++ L++VKGC+PG  KNS+++++
Sbjct: 176 RVLKVVAEKNLLVVKGCIPG-HKNSYVIIQ 204


>gi|228474733|ref|ZP_04059464.1| 50S ribosomal protein L3 [Staphylococcus hominis SK119]
 gi|314935832|ref|ZP_07843184.1| 50S ribosomal protein L3 [Staphylococcus hominis subsp. hominis
           C80]
 gi|228271396|gb|EEK12764.1| 50S ribosomal protein L3 [Staphylococcus hominis SK119]
 gi|313656397|gb|EFS20137.1| 50S ribosomal protein L3 [Staphylococcus hominis subsp. hominis
           C80]
          Length = 220

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/219 (42%), Positives = 124/219 (56%), Gaps = 11/219 (5%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58
           M  G++ RK+GMT V+   G  IPVTV+  +   V+  +T + +GY A+QVG  + +   
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEANQNVVLQKKTEEVDGYNAIQVGFADKQAYK 60

Query: 59  ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
                 K  +KP  G       +PK+ + EFR   + D   VG   +   F  G ++DVT
Sbjct: 61  KDAKSNKYANKPAEGHAKKAGAAPKRFIREFR-NVNVDEYEVGQEVTVDTFEAGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G + GKGF GA+KRH  G     HG S  HR+ GS G   D  RVFK +KM GRMGGN V
Sbjct: 120 GTSKGKGFQGAIKRHGQGRGPMAHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           TV+NLEVV VD    +ILVKG VPG KK  ++ ++ S K
Sbjct: 179 TVQNLEVVQVDTDNNVILVKGNVPGPKK-GFVEIKSSIK 216


>gi|160902256|ref|YP_001567837.1| ribosomal protein L3 [Petrotoga mobilis SJ95]
 gi|189042855|sp|A9BHA5|RL3_PETMO RecName: Full=50S ribosomal protein L3
 gi|160359900|gb|ABX31514.1| ribosomal protein L3 [Petrotoga mobilis SJ95]
          Length = 213

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/209 (41%), Positives = 127/209 (60%), Gaps = 4/209 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V+  + + IPVTV+    C VV  +T++ +GY A+Q+G  E   +  +K
Sbjct: 3   GILGKKVGMTRVFK-DDKAIPVTVIKAGPCVVVQKKTVETDGYNAIQIGFEEIPERKANK 61

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V P + L EFRV+  DD   +G     + F+ G+ +D+ G + G+G+SG 
Sbjct: 62  PLMGHFKKAQVKPLRYLREFRVENVDDY-EIGQKIDVTIFSEGEKIDLIGNSKGRGYSGV 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR NF G   THG S  HR  GSTG    P +VFK KKM G+ G  RVT++N EVV +D
Sbjct: 121 MKRWNFRGGENTHG-SKFHRGLGSTGMATFPSKVFKGKKMPGQYGNERVTIQNSEVVYID 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  LI VKG VPGA +   + +R++ K+
Sbjct: 180 VQNNLIAVKGGVPGA-RGGLVTIREAVKA 207


>gi|298531085|ref|ZP_07018486.1| 50S ribosomal protein L3 [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509108|gb|EFI33013.1| 50S ribosomal protein L3 [Desulfonatronospira thiodismutans ASO3-1]
          Length = 210

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 84/202 (41%), Positives = 119/202 (58%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT V++ +G+ IPVTV+    C V+  +  DK+GY A+Q+G        ++K
Sbjct: 6   GLIGKKLGMTSVFSDDGKFIPVTVIQAGPCPVIQKKDQDKDGYSAIQIGYDSMPGHKLNK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+RG  +       +KL EF  +  ++  P G   +   F  G  + +TG + GKGF+G 
Sbjct: 66  PVRGHQAKAGKGFFRKLTEFSPENVEEFEP-GQELNVEIFKPGDRIKLTGTSKGKGFAGV 124

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR NF GL  THG    HRS G+ G   DPG+VFK KKM GRMG   V+ KN E++SV 
Sbjct: 125 MKRWNFRGLPRTHGHEKVHRSPGAIGQCADPGKVFKGKKMPGRMGNKTVSYKNAEIISVR 184

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +  +ILVKG VPG +    +L
Sbjct: 185 TQDNVILVKGQVPGPRNGYVVL 206


>gi|300728443|ref|ZP_07061805.1| ribosomal protein L3 [Prevotella bryantii B14]
 gi|299774362|gb|EFI70992.1| ribosomal protein L3 [Prevotella bryantii B14]
          Length = 204

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/205 (43%), Positives = 127/205 (61%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G GEAK KN SK
Sbjct: 3   GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKNTSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F     +PKK L EF+    D+ L +G   +   F   Q VDV G + GKGF G 
Sbjct: 63  PLMGTFKKAGTTPKKHLAEFKF---DEELNLGDTLTVEIFNDAQFVDVVGTSKGKGFQGV 119

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ ++THG     R  GS G    P +VFK  +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLKVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  LILVKG V G   ++ ++ +
Sbjct: 180 IPEHNLILVKGSVAGCNGSTVLIEK 204


>gi|147676655|ref|YP_001210870.1| 50S ribosomal protein L3 [Pelotomaculum thermopropionicum SI]
 gi|189042854|sp|A5D5J0|RL3_PELTS RecName: Full=50S ribosomal protein L3
 gi|146272752|dbj|BAF58501.1| ribosomal protein L3 [Pelotomaculum thermopropionicum SI]
          Length = 210

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/212 (41%), Positives = 125/212 (58%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  +PVTV+    C VV  +T +K+GY A+Q+G G  K ++
Sbjct: 1   MPKGLLGKKVGMTQIFTDTGLAVPVTVIEAGPCIVVQKKTPEKDGYSAIQLGFGAKKERS 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KPM G F +  V P + L E RV+ + +   VG       F  G+ VDV G T G+GF
Sbjct: 61  FNKPMLGHFLAARVRPLRYLREVRVE-NPETYQVGQEIKADIFAPGEKVDVVGTTKGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH F      HG S  HR  GS G +  P RVFK +++ G +G  RVTV+NLEVV
Sbjct: 120 AGGIKRHGFHRGPMAHG-SKYHRRPGSLGAK-GPARVFKGRRLPGHLGMERVTVQNLEVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  R L+ VKG VPG  K   +L++ + K+
Sbjct: 178 KVDADRNLLAVKGAVPGP-KGGLVLIKQAAKA 208


>gi|298491398|ref|YP_003721575.1| 50S ribosomal protein L3 ['Nostoc azollae' 0708]
 gi|298233316|gb|ADI64452.1| 50S ribosomal protein L3 ['Nostoc azollae' 0708]
          Length = 211

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/197 (41%), Positives = 118/197 (59%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT +++  G  IPVTV+    C V   +T   +GY A+QVG G  K K 
Sbjct: 1   MSVGILGTKLGMTQIFDEAGVAIPVTVIQAGPCTVTQVKTKQTDGYCAIQVGYGVVKPKV 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P+ G  +  +    + L E+R     D   +G       F+ GQ+VDV G +IG+GF
Sbjct: 61  LNRPLLGHLAKSSAPALRHLNEYRTDASGDYA-LGQELKADIFSAGQIVDVIGTSIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KR++FG    +HG S +HR+ GS G    PGRV+  K+MAGR+GG RVT++ L +V
Sbjct: 120 AGNQKRNHFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGTRVTIRKLTIV 178

Query: 181 SVDDKRGLILVKGCVPG 197
            +D  R LIL+KG +PG
Sbjct: 179 RLDADRNLILIKGAIPG 195


>gi|325689231|gb|EGD31237.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK115]
          Length = 208

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 131/212 (61%), Gaps = 6/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGELIPVTVIEAAPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK++AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTIQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ +IL+KG VPGAKK S I ++ + K+
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKA 206


>gi|299541932|ref|ZP_07052255.1| 50S ribosomal protein L3 [Lysinibacillus fusiformis ZC1]
 gi|298725670|gb|EFI66311.1| 50S ribosomal protein L3 [Lysinibacillus fusiformis ZC1]
          Length = 209

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 128/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY A+QVG  + +VK 
Sbjct: 1   MAKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTVETDGYEAIQVGFEDKRVKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EFR   + +   VG       F  G ++DVTG+T GKGF
Sbjct: 61  SNKPEQGHVAKANTAPKRFIREFR-NVNVEEYEVGQEVKVEIFAEGDVIDVTGVTKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFK KK+ G+MGGN VT++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKQKKLPGQMGGNVVTIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  R L+LVKG VPG+KK + + V+ + K+
Sbjct: 178 KVDTDRNLLLVKGNVPGSKK-ALVTVKTAIKA 208


>gi|254674251|emb|CBA10035.1| 50S ribosomal protein L3 [Neisseria meningitidis alpha275]
          Length = 196

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/193 (46%), Positives = 118/193 (61%), Gaps = 2/193 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++    L  G   + S F VGQLVDVTG + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  +   K L+V
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGTPKHCSK-LKV 179

Query: 180 VSVDDKRGLILVK 192
           V VD +R L+ VK
Sbjct: 180 VRVDAERQLLWVK 192


>gi|239905858|ref|YP_002952597.1| 50S ribosomal protein L3 [Desulfovibrio magneticus RS-1]
 gi|259647413|sp|C4XLX3|RL3_DESMR RecName: Full=50S ribosomal protein L3
 gi|239795722|dbj|BAH74711.1| 50S ribosomal protein L3 [Desulfovibrio magneticus RS-1]
          Length = 210

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/206 (43%), Positives = 122/206 (59%), Gaps = 6/206 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT V+  +G  IPVTV+    C V   + L+K+GY A+Q+G  E   + V+K
Sbjct: 6   GILGRKLGMTRVFGDDGSIIPVTVIQAGPCPVTQVKNLEKDGYNAMQIGFDEIPERKVNK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPV--GSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           P +G          + L E R+   D  +P   G   +   F  G++V VTG +IGKGF+
Sbjct: 66  PEKGHLDKAARGYFRVLKEIRL---DGPVPFEQGMDVTVDIFAPGEIVKVTGTSIGKGFA 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR NF GL+ THG   +HRS GS G   +PG+V K KKMAG MG   VTV ++ VV 
Sbjct: 123 GVMKRWNFAGLKKTHGTEKAHRSGGSIGNNTEPGKVMKGKKMAGHMGARTVTVPSITVVD 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  +  LILVKG +PG  +N  ++VR
Sbjct: 183 VRPEMNLILVKGQIPGP-RNGVVVVR 207


>gi|33866599|ref|NP_898158.1| 50S ribosomal protein L3 [Synechococcus sp. WH 8102]
 gi|42559596|sp|Q7U4K0|RL3_SYNPX RecName: Full=50S ribosomal protein L3
 gi|33633377|emb|CAE08582.1| 50S ribosomal protein L3 [Synechococcus sp. WH 8102]
          Length = 218

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/211 (38%), Positives = 127/211 (60%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++ +GR +PVT++    C++   ++ D +GY AVQ+G G+ + K 
Sbjct: 1   MSIGILGKKLGMSQFFDEQGRAVPVTLIEAGPCRITQLKSSDTDGYAAVQIGFGDTREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G  +    +  + L E+RV   D    +G   +   F  GQ VDV+G TIG+GF
Sbjct: 61  INKPAKGHLNKTGETLLRHLREYRVDGLDG-FELGGSITVGDFEAGQKVDVSGDTIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRH F     THG S +HR  GS G    PGR++  K+MAGR GG ++T + L ++
Sbjct: 120 SGYQKRHGFSRGPMTHG-SKNHREPGSIGPGTTPGRIYPGKRMAGRYGGKKITTRGLTIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L++VKG VPG K  + + +R + +
Sbjct: 179 KVDSERNLLVVKGSVPG-KPGALLNIRPALR 208


>gi|299830377|ref|YP_003734592.1| ribosomal protein L3 [Kryptoperidinium foliaceum]
 gi|297385079|gb|ADI40377.1| ribosomal protein L3 [Kryptoperidinium foliaceum]
          Length = 208

 Score =  152 bits (385), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 83/206 (40%), Positives = 120/206 (58%), Gaps = 2/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT +++  G  IPVT+L +  C +   +T  K+GY A+QVG      K+
Sbjct: 1   MSVGLLGNKIGMTQIFDETGNIIPVTILKVGPCTITQVKTEAKDGYNAIQVGYSNVSNKS 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G     N+ P K L EFRV  D +   VG   +   F+ GQ V++ G TIGKGF
Sbjct: 61  LTQPELGHLQKSNIQPLKYLKEFRVNSDHE-FEVGQSLTLDLFSSGQFVNIQGKTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRHNF     THG S +HR+ GS G    PGRV   KKMAG++G    TVK L+VV
Sbjct: 120 AGLQKRHNFTRGPMTHG-SKNHRAPGSIGMGTTPGRVLPGKKMAGQLGNKITTVKKLKVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
            ++ +  ++++KG VPG   N   ++
Sbjct: 179 QLNLEENILVIKGSVPGKPGNLLTII 204


>gi|242278658|ref|YP_002990787.1| ribosomal protein L3 [Desulfovibrio salexigens DSM 2638]
 gi|259647407|sp|C6C185|RL3_DESAD RecName: Full=50S ribosomal protein L3
 gi|242121552|gb|ACS79248.1| ribosomal protein L3 [Desulfovibrio salexigens DSM 2638]
          Length = 210

 Score =  152 bits (385), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 87/206 (42%), Positives = 120/206 (58%), Gaps = 2/206 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT V+  +G  +PVTVL +  C V+  +T +K GY A+Q+G      + V+K
Sbjct: 6   GLLGKKLGMTRVFADDGSVVPVTVLEVGPCPVMQVKTEEKEGYNAIQIGYDALPERKVNK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G          + L EF ++   D   +G   S   F  G+ V VTG + GKGF G 
Sbjct: 66  PAKGHQEKAGKGYFRHLREFPLESVADY-ELGQEISVDIFAAGEKVKVTGTSKGKGFQGV 124

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR NF G RA+HG    HRS GS G    PG+VFK KKM G+MG  RVTV N+E+V V 
Sbjct: 125 MKRWNFAGSRASHGAEKVHRSPGSIGHATFPGKVFKGKKMPGQMGNERVTVSNIEIVDVR 184

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDS 209
               +++VKG VPG  KN  +++R +
Sbjct: 185 ADENVLVVKGQVPGP-KNGLVMIRKT 209


>gi|296126865|ref|YP_003634117.1| 50S ribosomal protein L3 [Brachyspira murdochii DSM 12563]
 gi|296018681|gb|ADG71918.1| 50S ribosomal protein L3 [Brachyspira murdochii DSM 12563]
          Length = 217

 Score =  152 bits (385), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/195 (41%), Positives = 113/195 (57%), Gaps = 2/195 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT V++  G  I VTV+    C V+  R  +K+GY A+Q+G G  K K++ K
Sbjct: 3   GIIGKKLGMTTVFDETGNAIAVTVVEAGPCTVMQIRDNEKDGYSAIQLGYGAVKEKHLKK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F   N+ PKK L EFR+        VG       F  G  +DV+ ++ G+GF+G 
Sbjct: 63  PQIGQFKKANLEPKKYLKEFRMDNTSSYT-VGQELKADVFQAGDFIDVSSLSKGRGFAGV 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHN+ G   +HG +   R+ GS GC   P RV+K K M G MG    T++NL+VV + 
Sbjct: 122 MKRHNYDGGPMSHGSNFRRRA-GSIGCNSYPARVWKGKGMPGHMGNALTTIQNLKVVEIR 180

Query: 184 DKRGLILVKGCVPGA 198
               LI++KG +PGA
Sbjct: 181 PDDNLIMIKGAIPGA 195


>gi|255690003|ref|ZP_05413678.1| 50S ribosomal protein L3 [Bacteroides finegoldii DSM 17565]
 gi|260624611|gb|EEX47482.1| 50S ribosomal protein L3 [Bacteroides finegoldii DSM 17565]
          Length = 205

 Score =  152 bits (385), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 83/205 (40%), Positives = 125/205 (60%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYEAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PK+ L EF+  + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKRHLAEFKEFETE--LNLGDTVTVEMFNDANFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ + THG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
                L+LVKG +PG  K S +L+ 
Sbjct: 181 IADHNLLLVKGSIPGC-KGSIVLIE 204


>gi|150025407|ref|YP_001296233.1| 50S ribosomal protein L3 [Flavobacterium psychrophilum JIP02/86]
 gi|166233142|sp|A6GZ99|RL3_FLAPJ RecName: Full=50S ribosomal protein L3
 gi|149771948|emb|CAL43422.1| 50S ribosomal protein L3 [Flavobacterium psychrophilum JIP02/86]
          Length = 205

 Score =  152 bits (385), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 84/206 (40%), Positives = 126/206 (61%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ RK+GMT +++  G+ IP TV+    C V   RT+  +GY A+Q+G  +   K+ +
Sbjct: 2   SGLIGRKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTIGVDGYEALQLGFDDKNEKHST 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F       KKK+ EF+    +  L  G V S   F+ G+ VD+ G++ GKGF G
Sbjct: 62  KADLGHFKKAGTVAKKKVVEFQDFVSEHKL--GDVISVDLFSEGEFVDIQGVSKGKGFQG 119

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG+ +ATHG     R+ GS G    P RVFK  +MAGRMGG+ V V+NL V+ 
Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGGDNVKVQNLRVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L+++KGC+PG   NS+++++
Sbjct: 180 VVAEKNLLVIKGCIPGC-NNSYVIIQ 204


>gi|169830030|ref|YP_001700188.1| 50S ribosomal protein L3 [Lysinibacillus sphaericus C3-41]
 gi|226730531|sp|B1HMY0|RL3_LYSSC RecName: Full=50S ribosomal protein L3
 gi|168994518|gb|ACA42058.1| 50S ribosomal protein L3 [Lysinibacillus sphaericus C3-41]
          Length = 209

 Score =  152 bits (384), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 128/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY A+QVG  + +VK 
Sbjct: 1   MAKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTVETDGYEAIQVGFEDKRVKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EFR   + +   VG       F  G ++DVTG+T GKGF
Sbjct: 61  SNKPQQGHVAKANTAPKRFIREFR-NVNVEEYEVGQEVKVEIFAEGDVIDVTGVTKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFK KK+ G+MGGN VT++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKQKKLPGQMGGNVVTIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  R L+LVKG VPG+KK + + V+ + K+
Sbjct: 178 KVDTDRNLLLVKGNVPGSKK-ALVTVKTASKA 208


>gi|125716985|ref|YP_001034118.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK36]
 gi|323350940|ref|ZP_08086598.1| 50S ribosomal protein L3 [Streptococcus sanguinis VMC66]
 gi|166234600|sp|A3CK63|RL3_STRSV RecName: Full=50S ribosomal protein L3
 gi|125496902|gb|ABN43568.1| 50S ribosomal protein L3, putative [Streptococcus sanguinis SK36]
 gi|322122922|gb|EFX94628.1| 50S ribosomal protein L3 [Streptococcus sanguinis VMC66]
 gi|324990002|gb|EGC21943.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK353]
 gi|324991815|gb|EGC23740.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK405]
 gi|324996295|gb|EGC28203.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK678]
 gi|325686405|gb|EGD28435.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK72]
 gi|325695810|gb|EGD37707.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK150]
 gi|325697976|gb|EGD39859.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK160]
 gi|327458431|gb|EGF04787.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK1]
 gi|327463723|gb|EGF10039.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK1057]
 gi|327467335|gb|EGF12835.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK330]
 gi|327471742|gb|EGF17183.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK408]
 gi|327490463|gb|EGF22245.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK1058]
 gi|328945217|gb|EGG39371.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK1087]
          Length = 208

 Score =  152 bits (384), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 131/212 (61%), Gaps = 6/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGELIPVTVVEAAPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK++AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTIQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ +IL+KG VPGAKK S I ++ + K+
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKA 206


>gi|57867723|ref|YP_189394.1| 50S ribosomal protein L3 [Staphylococcus epidermidis RP62A]
 gi|81819347|sp|Q5HLZ9|RL3_STAEQ RecName: Full=50S ribosomal protein L3
 gi|57638381|gb|AAW55169.1| ribosomal protein L3 [Staphylococcus epidermidis RP62A]
          Length = 220

 Score =  152 bits (384), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/208 (44%), Positives = 119/208 (57%), Gaps = 10/208 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+QVG        
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60

Query: 53  AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
            G    K  +KP  G     + +PK+ + EFR   + D   VG   S   F  G ++DVT
Sbjct: 61  KGSKSNKYANKPAEGHAKKADTAPKRFIREFR-NLNVDEYEVGQEVSVDTFETGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH  G     HG S  HR+ GS G   D  +VFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQGRGPMAHG-SHFHRAPGSVGMASDASKVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKK 200
           TV+NLEVV VD +  +ILVKG VPG KK
Sbjct: 179 TVQNLEVVQVDTENSVILVKGNVPGPKK 206


>gi|251812047|ref|ZP_04826520.1| 50S ribosomal protein L3 [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875342|ref|ZP_06284215.1| 50S ribosomal protein L3 [Staphylococcus epidermidis SK135]
 gi|293368433|ref|ZP_06615057.1| 50S ribosomal protein L3 [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|251804381|gb|EES57038.1| 50S ribosomal protein L3 [Staphylococcus epidermidis BCM-HMP0060]
 gi|281296107|gb|EFA88628.1| 50S ribosomal protein L3 [Staphylococcus epidermidis SK135]
 gi|291317391|gb|EFE57813.1| 50S ribosomal protein L3 [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329731174|gb|EGG67544.1| 50S ribosomal protein L3 [Staphylococcus epidermidis VCU144]
 gi|329736435|gb|EGG72703.1| 50S ribosomal protein L3 [Staphylococcus epidermidis VCU028]
 gi|329736982|gb|EGG73237.1| 50S ribosomal protein L3 [Staphylococcus epidermidis VCU045]
          Length = 220

 Score =  152 bits (384), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/208 (44%), Positives = 119/208 (57%), Gaps = 10/208 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+QVG        
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60

Query: 53  AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
            G    K  +KP  G     + +PK+ + EFR   + D   VG   S   F  G ++DVT
Sbjct: 61  KGSKSNKYANKPAEGHAKKADTAPKRFIREFR-NVNVDEYEVGQEVSVDTFETGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH  G     HG S  HR+ GS G   D  +VFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQGRGPMAHG-SHFHRAPGSVGMASDASKVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKK 200
           TV+NLEVV VD +  +ILVKG VPG KK
Sbjct: 179 TVQNLEVVQVDTENSVILVKGNVPGPKK 206


>gi|308235496|ref|ZP_07666233.1| 50S ribosomal protein L3 [Gardnerella vaginalis ATCC 14018]
 gi|311115167|ref|YP_003986388.1| 50S ribosomal protein L3 [Gardnerella vaginalis ATCC 14019]
 gi|310946661|gb|ADP39365.1| 50S ribosomal protein L3 [Gardnerella vaginalis ATCC 14019]
          Length = 216

 Score =  152 bits (384), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 84/212 (39%), Positives = 121/212 (57%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+ ++ RKLGM+ V++  G  +PVT++ +    V   +T + +GY AVQ+G G+     V
Sbjct: 7   RTALLGRKLGMSQVWDENGLFVPVTLVEVATNVVTAVKTEETDGYCAVQLGYGQIDPTKV 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G F+   V+P++ L E R +   D  P G   +   F  G  VDVTG T GKGF+
Sbjct: 67  TKPLAGHFAKAGVTPRRHLAEVRTENAADYKP-GQELTAEVFAEGAEVDVTGTTKGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F   R THG   + R  GS G    P R+ K K+MAGRMG    T  NL +VS
Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTSTALNLTIVS 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D + G++ +KG +PG  K + +LVR + K A
Sbjct: 186 SDVENGILAIKGAIPG-PKGAIVLVRSAVKGA 216


>gi|260893372|ref|YP_003239469.1| 50S ribosomal protein L3 [Ammonifex degensii KC4]
 gi|260865513|gb|ACX52619.1| 50S ribosomal protein L3 [Ammonifex degensii KC4]
          Length = 209

 Score =  152 bits (384), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 4/209 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT  +   G  + VTV+    C VV  +  + +GY A+QVG  E     V+K
Sbjct: 3   GILGKKLGMTQYFTPAGEAMAVTVIKAGPCVVVQTKNRETDGYEAIQVGFEEIPEHRVNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+RG F+   + P + L EFRV  D     VG       F+ G+ VDVTG++ GKGF+G 
Sbjct: 63  PLRGHFARAGLKPLRYLREFRV-PDASAYTVGQEIKVDIFSPGEKVDVTGISKGKGFAGG 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KRH F     +HG S  HR  GS G +  P RVFK +K+ G MG  RVTV+NLEVV VD
Sbjct: 122 IKRHGFSRGPMSHG-SKYHRRPGSLGAK-GPARVFKGRKLPGHMGMERVTVQNLEVVKVD 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R L++VKG VPG  +   ++++ + K+
Sbjct: 180 PERNLLVVKGAVPGP-RGGLLIIKQAVKA 207


>gi|153805957|ref|ZP_01958625.1| hypothetical protein BACCAC_00202 [Bacteroides caccae ATCC 43185]
 gi|149130634|gb|EDM21840.1| hypothetical protein BACCAC_00202 [Bacteroides caccae ATCC 43185]
          Length = 205

 Score =  152 bits (384), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 82/205 (40%), Positives = 125/205 (60%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PK+ L EF+  + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKRAGVTPKRHLAEFKEFETE--LNLGDTVTVELFNDANFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ + THG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
                L+L+KG +PG  K S +L+ 
Sbjct: 181 IADHNLLLIKGSIPGC-KGSIVLIE 204


>gi|299065415|emb|CBJ36584.1| 50S ribosomal subunit protein L3 [Ralstonia solanacearum CMR15]
          Length = 209

 Score =  152 bits (384), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/202 (42%), Positives = 120/202 (59%), Gaps = 2/202 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V+  +G  IPVTVL +   +V   +T + +GY AVQV  G  +   V+KP+ G  + 
Sbjct: 1   MTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGTRRASRVTKPLAGHLAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
             V   + + EFR+       L +G       F+VGQ +DV G TIGKG++G +KR++F 
Sbjct: 61  AGVEAGEIIVEFRIDATKAAELKLGDTIDVDLFSVGQKIDVQGTTIGKGYAGTIKRYHFS 120

Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
             RA+HG S SH   GS G  QDPGRVF  K+M G MG    TV+NL +V VD +R L+ 
Sbjct: 121 SGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVIVRVDAERKLLF 180

Query: 191 VKGCVPGAKKNSWILVRDSFKS 212
           VKG VPGA K+ +++V  + K+
Sbjct: 181 VKGAVPGA-KSGFVVVSPAVKA 201


>gi|239636233|ref|ZP_04677237.1| 50S ribosomal protein L3 [Staphylococcus warneri L37603]
 gi|239598249|gb|EEQ80742.1| 50S ribosomal protein L3 [Staphylococcus warneri L37603]
 gi|330685188|gb|EGG96852.1| 50S ribosomal protein L3 [Staphylococcus epidermidis VCU121]
          Length = 223

 Score =  152 bits (384), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/220 (43%), Positives = 124/220 (56%), Gaps = 11/220 (5%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+QVG  + K   
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEAGQNVVLQKKTEEVDGYNAIQVGFEDKKAYK 60

Query: 59  ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
                 K  +KP  G     + +PK+ + EFR   + D   VG   S   F  G ++DVT
Sbjct: 61  KGSKTNKYANKPAEGHAKKADTAPKRFIREFR-NVNVDEYEVGQEVSVDTFETGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH        HG S  HR+ GS G   D  RVFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMAHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           TV+NLEVV VD +  +ILVKG VPG KK   + +  S KS
Sbjct: 179 TVQNLEVVQVDTENSVILVKGNVPGPKK-GLVEISTSIKS 217


>gi|254527207|ref|ZP_05139259.1| ribosomal protein L3 [Prochlorococcus marinus str. MIT 9202]
 gi|221538631|gb|EEE41084.1| ribosomal protein L3 [Prochlorococcus marinus str. MIT 9202]
          Length = 217

 Score =  152 bits (384), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 79/197 (40%), Positives = 124/197 (62%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +G  +PVT++    C+V   +T   +GY A+Q+G G +K K+
Sbjct: 1   MSIGILGKKLGMSQLFDDKGNAVPVTLIEAGPCRVTQLKTNALDGYTAIQIGYGVSKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SKP +G          K L E+RV++      +G+  +   F VGQ VD++G ++G+GF
Sbjct: 61  ISKPEKGHLLKSGEELLKHLKEYRVEETSSY-EIGNQITVKNFEVGQKVDISGKSMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRH F     +HG S +HR+ GSTG    PGR++  K+MAGR GG ++T K L V+
Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVL 178

Query: 181 SVDDKRGLILVKGCVPG 197
            +DD++ L++VKG VPG
Sbjct: 179 KIDDQKNLLVVKGSVPG 195


>gi|11465780|ref|NP_053924.1| ribosomal protein L3 [Porphyra purpurea]
 gi|1710474|sp|P51314|RK3_PORPU RecName: Full=50S ribosomal protein L3, chloroplastic
 gi|1276780|gb|AAC08200.1| 50S ribosomal protein L3 [Porphyra purpurea]
          Length = 205

 Score =  152 bits (384), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 82/199 (41%), Positives = 121/199 (60%), Gaps = 2/199 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT  ++  G  IPVTV+ +  C +   +++  +GY A+QVG  +   + 
Sbjct: 1   MSVGILGTKVGMTQFFDETGLSIPVTVIQVGPCVITQIKSMSTDGYNAIQVGYKQVVEQK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SKP+ G        P K L E+ V+  +D   V  VFS + F VGQ V+V+  +IGKGF
Sbjct: 61  LSKPLLGHLKKSQSPPLKYLREYLVESIEDF-EVSQVFSTNIFEVGQKVNVSSKSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRH+F     +HG S +HR  GS G    PGRV+  K MAG+MG  +VT+KNL++V
Sbjct: 120 SGYQKRHHFSRGPMSHG-SKNHRQPGSIGAGTTPGRVYPGKNMAGQMGNKKVTIKNLQIV 178

Query: 181 SVDDKRGLILVKGCVPGAK 199
           S++ +  L+L+KG VPG +
Sbjct: 179 SINIENDLLLLKGAVPGKQ 197


>gi|28493521|ref|NP_787682.1| 50S ribosomal protein L3 [Tropheryma whipplei str. Twist]
 gi|28572367|ref|NP_789147.1| 50S ribosomal protein L3 [Tropheryma whipplei TW08/27]
 gi|42559617|sp|Q83FY6|RL3_TROWT RecName: Full=50S ribosomal protein L3
 gi|42559618|sp|Q83I78|RL3_TROW8 RecName: Full=50S ribosomal protein L3
 gi|28410498|emb|CAD66884.1| 50S ribosomal protein L3 [Tropheryma whipplei TW08/27]
 gi|28476563|gb|AAO44651.1| 50S ribosomal protein L3 [Tropheryma whipplei str. Twist]
          Length = 210

 Score =  152 bits (384), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 124/212 (58%), Gaps = 9/212 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVK 59
           M   ++  K+GMT +++  GRR+           VV   +  +K+GY  +Q+  G    +
Sbjct: 1   MARALLGTKVGMTQIWS--GRRVVPVTAVAVTTNVVSQVKAPEKDGYSRLQIATGAIDPR 58

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            V++P +G F+   ++P++ + E      D    +G  F P  F  GQLVDV G + GKG
Sbjct: 59  RVNRPRKGHFAKAGLTPRRFIREV-----DSEGSLGDEFGPEIFQEGQLVDVVGKSKGKG 113

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG MKRHNF G+ ATHG   +HR  GS G    P RVFK  +MAGR+G +RVTV NL +
Sbjct: 114 FSGTMKRHNFQGVSATHGSHRNHRKPGSVGASSTPSRVFKGTRMAGRLGSSRVTVHNLRL 173

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V +D + GL+LV+G VPG+   S +++RD+ K
Sbjct: 174 VKIDSENGLLLVEGAVPGS-SGSPVIIRDAVK 204


>gi|157414163|ref|YP_001485029.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9215]
 gi|166990938|sp|A8G762|RL3_PROM2 RecName: Full=50S ribosomal protein L3
 gi|157388738|gb|ABV51443.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9215]
          Length = 217

 Score =  152 bits (384), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 79/197 (40%), Positives = 124/197 (62%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +G  +PVT++    C+V   +T   +GY A+Q+G G +K K+
Sbjct: 1   MSIGILGKKLGMSQLFDDKGNAVPVTLIEAGPCRVTQLKTNALDGYTAIQIGYGVSKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SKP +G          K L E+RV++      +G+  +   F VGQ VD++G ++G+GF
Sbjct: 61  ISKPEKGHLLKSGEELLKHLKEYRVEETSSY-EIGNQITVKNFEVGQKVDISGKSMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRH F     +HG S +HR+ GSTG    PGR++  K+MAGR GG ++T K L V+
Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVL 178

Query: 181 SVDDKRGLILVKGCVPG 197
            +DD++ L++VKG VPG
Sbjct: 179 KIDDQKNLLVVKGSVPG 195


>gi|118411190|ref|YP_874584.1| 50S ribosomal protein L3 [Thalassiosira pseudonana]
 gi|125987628|sp|A0T0X2|RK3_THAPS RecName: Full=50S ribosomal protein L3, chloroplastic
 gi|116739937|gb|ABK20807.1| 50S ribosomal protein L3 [Thalassiosira pseudonana]
          Length = 207

 Score =  152 bits (384), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 82/206 (39%), Positives = 118/206 (57%), Gaps = 2/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT +++  G  IPVT+L +  C +   +T   +GY A+QVG G    K 
Sbjct: 1   MSLGLLGNKIGMTQIFDESGNIIPVTILKVGPCVITQVKTTLNDGYNAIQVGYGNVSTKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G     N+ P K L EF V  D     VG + +   F  GQL++VTG +IGKGF
Sbjct: 61  LTQPQLGHLQKSNIQPLKYLKEFHV-SDPTEFNVGQILNVESFVAGQLINVTGKSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KR+NF     THG S +HR+ GS G    PGRV   KKMAG++G     +K L++V
Sbjct: 120 SGLQKRYNFARGPMTHG-SKNHRAPGSIGMGTSPGRVLPGKKMAGQLGNKTANIKKLKIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
            V++   +++VKG VPG   N   ++
Sbjct: 179 QVNNDENILVVKGAVPGKPGNLLSII 204


>gi|126697087|ref|YP_001091973.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9301]
 gi|166233175|sp|A3PF47|RL3_PROM0 RecName: Full=50S ribosomal protein L3
 gi|126544130|gb|ABO18372.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9301]
          Length = 217

 Score =  152 bits (384), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 78/197 (39%), Positives = 124/197 (62%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +G  +PVT++    C++   +T   +GY AVQ+G G +K K+
Sbjct: 1   MSIGILGKKLGMSQLFDEKGNSVPVTLIEAGPCRITQLKTTALDGYTAVQIGYGLSKDKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SKP +G          K L E+RV++      +G+  +   F VGQ VD++G ++G+GF
Sbjct: 61  ISKPEKGHLLKSGEELLKHLKEYRVEETSSY-EIGNQITVKNFEVGQKVDISGKSMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     +HG S +HR+ GSTG    PGR++  K+MAGR GG ++T K L V+
Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVL 178

Query: 181 SVDDKRGLILVKGCVPG 197
            +DD++ L++VKG VPG
Sbjct: 179 KIDDQKNLLVVKGSVPG 195


>gi|323483301|ref|ZP_08088691.1| 50S ribosomal protein L3 [Clostridium symbiosum WAL-14163]
 gi|323691201|ref|ZP_08105477.1| 50S ribosomal protein L3 [Clostridium symbiosum WAL-14673]
 gi|323403399|gb|EGA95707.1| 50S ribosomal protein L3 [Clostridium symbiosum WAL-14163]
 gi|323504720|gb|EGB20506.1| 50S ribosomal protein L3 [Clostridium symbiosum WAL-14673]
          Length = 211

 Score =  152 bits (384), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 125/212 (58%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G   PVTVL    C V   +T++ +GY AVQVG  + + K 
Sbjct: 1   MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTVENDGYKAVQVGFVDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F    V+ K+ + EFR +  ++   V        F  G  +DVT ++ GKGF
Sbjct: 61  VTKPVKGHFDKAGVAYKRFVREFRFENAEEY-SVKDEIKAEIFAAGDKIDVTAVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR+        HG S  HR  GS G    PGRVFK K M G MG  +VT++NLEVV
Sbjct: 120 QGAIKRYGQHRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGHMGSVKVTIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD    LILVKG VPG KK S + V+++ K+
Sbjct: 179 RVDADSNLILVKGAVPGPKK-SLVTVKETVKA 209


>gi|242243947|ref|ZP_04798390.1| 50S ribosomal protein L3 [Staphylococcus epidermidis W23144]
 gi|242232580|gb|EES34892.1| 50S ribosomal protein L3 [Staphylococcus epidermidis W23144]
 gi|319400623|gb|EFV88848.1| 50S ribosomal protein L3 [Staphylococcus epidermidis FRI909]
          Length = 220

 Score =  152 bits (384), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 91/208 (43%), Positives = 119/208 (57%), Gaps = 10/208 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+QVG        
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60

Query: 53  AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
            G    K  +KP  G     + +PK+ + EFR   + D   VG   S   F  G ++DVT
Sbjct: 61  KGSKSNKYANKPAEGHAKKADTAPKRFIREFR-NVNVDEYEVGQEVSVDTFETGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH  G     HG S  HR+ GS G   D  +VFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQGRGPMAHG-SHFHRAPGSVGMASDASKVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKK 200
           TV+NLEVV +D +  +ILVKG VPG KK
Sbjct: 179 TVQNLEVVQIDTENSVILVKGNVPGPKK 206


>gi|311029049|ref|ZP_07707139.1| 50S ribosomal protein L3 [Bacillus sp. m3-13]
          Length = 206

 Score =  152 bits (383), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 127/212 (59%), Gaps = 7/212 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKVGMTQVFAENGDLIPVTVIEATPNVVLQVKTVETDGYEAIQIGFADKRDKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP++G  +  N +PK+ + E         L VG       F  G +VDVTG++ GKGF
Sbjct: 61  ANKPLKGHVAKANTAPKRFIREISGAN----LEVGQEVKVDIFAEGDVVDVTGISKGKGF 116

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G++KRHN      THG S  HR  GS G    P RVFK K + GRMGG R+T++NLE+V
Sbjct: 117 QGSIKRHNQSRGPMTHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGERITIQNLEIV 174

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPG KK S I ++ + K+
Sbjct: 175 KVDAERNLLLVKGNVPGPKK-SLITIKSAIKA 205


>gi|194477058|ref|YP_002049237.1| 50S ribosomal protein L3 [Paulinella chromatophora]
 gi|212288241|sp|B1X508|RK3_PAUCH RecName: Full=50S ribosomal protein L3, organellar chromatophore
 gi|171192065|gb|ACB43027.1| 50S ribosomal protein L3 [Paulinella chromatophora]
          Length = 218

 Score =  152 bits (383), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 81/197 (41%), Positives = 121/197 (61%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++ EG+ +PVT++    C++   +++D +GY AVQ+G GE + K 
Sbjct: 1   MSIGILGKKLGMSQFFDEEGKAVPVTLIEAGPCRITQLKSIDTDGYTAVQLGYGETRQKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G  +         L E+RV+  D  L +G+  +   F  GQ VDV+G ++G+GF
Sbjct: 61  VNKPSKGHLARSGEQLLSHLREYRVETIDG-LKLGNSITVEDFKAGQKVDVSGDSMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRH F     THG S +HR  GSTG    PGR++  K+MAGR GG ++T + L +V
Sbjct: 120 SGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKQITTRGLVIV 178

Query: 181 SVDDKRGLILVKGCVPG 197
            VD    L++VKG VPG
Sbjct: 179 KVDTGHNLLVVKGSVPG 195


>gi|163791666|ref|ZP_02186061.1| 50S ribosomal protein L3 [Carnobacterium sp. AT7]
 gi|159873045|gb|EDP67154.1| 50S ribosomal protein L3 [Carnobacterium sp. AT7]
          Length = 210

 Score =  152 bits (383), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 93/216 (43%), Positives = 130/216 (60%), Gaps = 10/216 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+   G  IPVTV+      V+  +T++ +GY AVQ+G  E +   
Sbjct: 1   MTKGILGKKVGMTQVFTESGELIPVTVIEATPNVVLQVKTMETDGYEAVQLGYQEKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLL---PVGSVFSPSYFTVGQLVDVTGMTIG 117
            +KP  G  +  N +PK+ + EF    +D +L    VG       F VG +V+VTG T G
Sbjct: 61  SNKPAMGHVAKANATPKRFIREF----NDVVLGEYEVGQEVKVDTFAVGDIVNVTGTTKG 116

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF G +KRH       +HG S  HR  GS G   DP RVFK   + GRMGGNRVT+KNL
Sbjct: 117 KGFQGVIKRHGHSRGPMSHG-SRHHRRPGSMGP-VDPNRVFKRTLLPGRMGGNRVTIKNL 174

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           E+VSVD ++ ++L+KG VPG+KK S I ++ +F+ A
Sbjct: 175 EIVSVDVEKNVLLIKGNVPGSKK-SLIQIKSAFQKA 209


>gi|112791754|gb|ABI22152.1| ribosomal protein L3 [Flavobacterium hibernum]
          Length = 205

 Score =  152 bits (383), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/210 (41%), Positives = 127/210 (60%), Gaps = 12/210 (5%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C V   RT   +GY A+Q+G  +   K+ +
Sbjct: 2   SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTKGVDGYEALQLGFDDKNEKHST 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFR----VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           K   G F       KKK+ EF+     QK  DL+ V      S F  G+ VDV G++ GK
Sbjct: 62  KAALGHFKKAGTVAKKKVVEFQDFATEQKLGDLIDV------SIFAEGEFVDVQGVSKGK 115

Query: 119 GFSGAMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           GF G +KRH FGG+ +ATHG     R+ GS G    P RVFK  +MAGRMGG+ V V+NL
Sbjct: 116 GFQGVVKRHGFGGVGQATHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGGDNVKVQNL 175

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVR 207
            V+ V  ++ L+++KGCVPG  KNS+++++
Sbjct: 176 RVLKVVAEKNLLVIKGCVPG-HKNSYVIIQ 204


>gi|260435636|ref|ZP_05789606.1| 50S ribosomal protein L3 [Synechococcus sp. WH 8109]
 gi|260413510|gb|EEX06806.1| 50S ribosomal protein L3 [Synechococcus sp. WH 8109]
          Length = 229

 Score =  152 bits (383), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++ +GR +PVT++    C++   +  D +GY AVQ+G GE + K 
Sbjct: 12  MSIGILGKKLGMSQFFDEQGRAVPVTLIEAGPCRITQLKNDDTDGYSAVQIGFGETREKL 71

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G  +       + L E+RV   + L  +G   +   F  GQ VDV+G T+G+GF
Sbjct: 72  INKPAQGHLNKSGEGLLRHLREYRVDSVEGL-EIGGAITVGDFEAGQKVDVSGDTVGRGF 130

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     THG S +HR  GSTG    PGR++  K+MAGR GG ++T + L ++
Sbjct: 131 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLTIL 189

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +  L++VKG VPG K  + + +R + +
Sbjct: 190 KVDSEHNLLVVKGSVPG-KPGALLNIRPALR 219


>gi|167752385|ref|ZP_02424512.1| hypothetical protein ALIPUT_00629 [Alistipes putredinis DSM 17216]
 gi|167660626|gb|EDS04756.1| hypothetical protein ALIPUT_00629 [Alistipes putredinis DSM 17216]
          Length = 204

 Score =  152 bits (383), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 83/198 (41%), Positives = 117/198 (59%), Gaps = 4/198 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT VY+ EG+ IP TV+    C V   RT++K+ Y AVQ+   +   K+ +
Sbjct: 2   SGLIGKKIGMTSVYSAEGKNIPCTVIEAGPCVVTQIRTVEKDSYEAVQIAYDDKSEKHTT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
             + G F     +PK+K+ EF   KD   + +G   +   F+    VDVTG++ GKGF G
Sbjct: 62  GSLLGHFKKAGTTPKRKMAEF---KDMPEVNLGDTLTVDMFSEEDWVDVTGISKGKGFQG 118

Query: 123 AMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG+   THG     R  GS G    P RVF  K++ GRMGG +V V NL+V+ 
Sbjct: 119 VVKRHGFGGVGGQTHGQHNRQRKPGSLGASSYPSRVFPGKRLPGRMGGEQVKVLNLKVLK 178

Query: 182 VDDKRGLILVKGCVPGAK 199
           +  +  LILVKG +PGAK
Sbjct: 179 IIPENNLILVKGSIPGAK 196


>gi|124023995|ref|YP_001018302.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9303]
 gi|166233177|sp|A2CC27|RL3_PROM3 RecName: Full=50S ribosomal protein L3
 gi|123964281|gb|ABM79037.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9303]
          Length = 218

 Score =  152 bits (383), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 83/209 (39%), Positives = 127/209 (60%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++ +GR IPVT++    C++   +T D +GY AVQ+G G+ + K 
Sbjct: 1   MSIGILGKKLGMSQFFDDQGRAIPVTLIEAGPCRITQLKTSDIDGYAAVQIGFGDTREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G  +       K L E+RV+  +  L +G+  +   F  GQ VDV+G T+G+GF
Sbjct: 61  INKPSKGHLTKSGEVLLKHLREYRVEGLEG-LELGAAITVGSFEAGQKVDVSGDTMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRH F     +HG S +HR  GSTG    PGR++  K+MAGR GG + T + L ++
Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKRTTRGLTIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            VD  R L++VKG VPG K  + + +R +
Sbjct: 179 KVDSNRNLLVVKGSVPG-KPGALLNIRPA 206


>gi|320335523|ref|YP_004172234.1| 50S ribosomal protein L3 [Deinococcus maricopensis DSM 21211]
 gi|319756812|gb|ADV68569.1| 50S ribosomal protein L3 [Deinococcus maricopensis DSM 21211]
          Length = 206

 Score =  152 bits (383), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/195 (45%), Positives = 113/195 (57%), Gaps = 6/195 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  K+GMT V+  + + IPVTV+    C VV  +T   +GY AVQVG      K +++
Sbjct: 3   GILGTKVGMTQVWK-DDKVIPVTVVLAGPCPVVQRKTTATDGYEAVQVGFMPKNEKRINR 61

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G      VS  + L EFR     +  P G   +   F  G+ +D TG + GKG  G 
Sbjct: 62  PLMGHLKKAGVSGVRYLREFR-----NFTPEGDTITVDIFGAGEKIDATGTSKGKGTQGV 116

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR NF G  A+HG    HR  GS G R+ PGRV+K K+MAGRMG  RVTV+NLEVV V 
Sbjct: 117 MKRWNFKGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGRMGNERVTVQNLEVVEVR 176

Query: 184 DKRGLILVKGCVPGA 198
               LILVKG +PGA
Sbjct: 177 AGENLILVKGAIPGA 191


>gi|325663062|ref|ZP_08151512.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 4_1_37FAA]
 gi|331086669|ref|ZP_08335746.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|325470516|gb|EGC73746.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 4_1_37FAA]
 gi|330409835|gb|EGG89270.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 226

 Score =  152 bits (383), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 92/228 (40%), Positives = 126/228 (55%), Gaps = 19/228 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G   PVTVL    C V   +T++ +GY AVQVG  + K K 
Sbjct: 1   MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQIKTVENDGYSAVQVGFVDKKDKI 60

Query: 61  V----------------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
           V                +K  +G F    VS K+ + EF+ +  D+   +        F 
Sbjct: 61  VNVDKNGKKTIVHRHGTTKAEKGHFDKAGVSSKRFVREFKFENADEF-ELAQEIKADIFA 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  VD T ++ GKGF GA+KRHN      THG S  HR  GS G   DP +VFK KKM 
Sbjct: 120 AGDKVDATAISKGKGFQGAIKRHNQHRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           G MG  R+T++NLE+V VD +  LILVKG VPG KK S + +++S K+
Sbjct: 179 GHMGSKRITIQNLEIVRVDAENNLILVKGSVPGPKK-SLVTIKESVKA 225


>gi|242371896|ref|ZP_04817470.1| 50S ribosomal protein L3 [Staphylococcus epidermidis M23864:W1]
 gi|242350403|gb|EES42004.1| 50S ribosomal protein L3 [Staphylococcus epidermidis M23864:W1]
          Length = 220

 Score =  152 bits (383), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 92/208 (44%), Positives = 118/208 (56%), Gaps = 10/208 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+QVG        
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60

Query: 53  AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
            G    K  +KP  G     + +PK+ + EFR   + D   VG   S   F  G ++DVT
Sbjct: 61  KGSKSNKYANKPAEGHAKKADTAPKRFIREFR-NVNVDEYEVGQEVSVDTFETGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH        HG S  HR+ GS G   D  RVFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMAHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKK 200
           TV+NLEVV VD +  +ILVKG VPG KK
Sbjct: 179 TVQNLEVVQVDTENSVILVKGNVPGPKK 206


>gi|242624269|ref|YP_003002187.1| 50S ribosomal protein L3 [Aureoumbra lagunensis]
 gi|239997377|gb|ACS36899.1| 50S ribosomal protein L3 [Aureoumbra lagunensis]
          Length = 208

 Score =  152 bits (383), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 85/201 (42%), Positives = 118/201 (58%), Gaps = 2/201 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT + +  G  +PVT+L    C V   +T++ +GY AVQVG  +   K 
Sbjct: 1   MPLGLLGNKIGMTQIVDERGNMVPVTILRAGPCIVTQIKTVEVDGYEAVQVGYNQVSSKF 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP  G    V V   + L E+R+   + +  +G   S   F  G LVD+TG TIGKGF
Sbjct: 61  LTKPQIGHLEKVGVPLLRYLHEYRIDSTEQVT-LGQTISVDMFKSGDLVDITGKTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRHNFG    THG S +HR+ GS G    PGRV+  KKMAG +G  +VT+K L+++
Sbjct: 120 AGLQKRHNFGRGPMTHG-SKNHRAPGSIGAGTTPGRVYPGKKMAGHLGAKKVTIKKLKIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKN 201
            VD +  LI+V G VPG   N
Sbjct: 179 FVDAENNLIVVLGSVPGKSGN 199


>gi|123969297|ref|YP_001010155.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. AS9601]
 gi|166233179|sp|A2BTD7|RL3_PROMS RecName: Full=50S ribosomal protein L3
 gi|123199407|gb|ABM71048.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. AS9601]
          Length = 217

 Score =  152 bits (383), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 79/197 (40%), Positives = 123/197 (62%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +G  +PVT++    C+V   +T   +GY AVQ+G G +K K+
Sbjct: 1   MSIGILGKKLGMSQLFDDKGNSVPVTLIEAGPCRVTQLKTTALDGYTAVQIGYGLSKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SKP +G          K L E+RV++      +G   +   F VGQ VD++G ++G+GF
Sbjct: 61  LSKPEKGHLLKSGEELLKHLKEYRVEETSSY-EIGKQITVKNFEVGQKVDISGKSMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     +HG S +HR+ GSTG    PGR++  K+MAGR GG ++T K L V+
Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVL 178

Query: 181 SVDDKRGLILVKGCVPG 197
            +DD++ L++VKG VPG
Sbjct: 179 KIDDQKNLLVVKGSVPG 195


>gi|303246993|ref|ZP_07333269.1| 50S ribosomal protein L3 [Desulfovibrio fructosovorans JJ]
 gi|302491700|gb|EFL51583.1| 50S ribosomal protein L3 [Desulfovibrio fructosovorans JJ]
          Length = 210

 Score =  152 bits (383), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 87/204 (42%), Positives = 118/204 (57%), Gaps = 2/204 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT V+  +G  IPVTV+    C V   +T +K+GY A+Q+G      + V+K
Sbjct: 6   GILGRKLGMTRVFGDDGSIIPVTVIEAGPCPVTQVKTEEKDGYNAMQIGFDTIPERKVNK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G          + L E R         +G   +   F  G+ V +TG +IGKGF+G 
Sbjct: 66  PEKGHMDKAGRGYFRTLRELRCD-GPAAFELGMDVTVDIFAPGETVKITGTSIGKGFAGV 124

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF GL+ THG   +HRS GS G   +PG+V K K+MAG MG   VTV  ++VV V 
Sbjct: 125 MKRHNFAGLKKTHGTEKAHRSGGSIGNNTEPGKVMKGKRMAGHMGARTVTVSGIQVVDVR 184

Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207
            +  LILVKG VPG  +N  ++VR
Sbjct: 185 PEMNLILVKGQVPGP-RNCVVMVR 207


>gi|160941069|ref|ZP_02088407.1| hypothetical protein CLOBOL_05962 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436018|gb|EDP13785.1| hypothetical protein CLOBOL_05962 [Clostridium bolteae ATCC
           BAA-613]
          Length = 226

 Score =  151 bits (382), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 89/211 (42%), Positives = 121/211 (57%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N  G  +PVTVL    C V   +T + +GY AVQVG  + + K 
Sbjct: 16  MKKAILATKVGMTQIFNENGALVPVTVLQAGPCVVTQVKTAENDGYKAVQVGFVDKRDKL 75

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKP +G F    VS K+ + EF+ +  ++   V        F  G  +D T ++ GKGF
Sbjct: 76  VSKPQKGHFDKAGVSYKRYVREFKFENAEEY-SVKDEIKADIFAAGDKIDATAISKGKGF 134

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR+        HG S  HR  GS G    PGRVFK K M G MG  ++TV+NLEVV
Sbjct: 135 QGAIKRYGQHRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGHMGSKQITVQNLEVV 193

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD    LILVKG VPG KK S + ++++ K
Sbjct: 194 KVDVDNNLILVKGAVPGPKK-SLVTIKETVK 223


>gi|291562768|emb|CBL41584.1| 50S ribosomal protein L3, bacterial [butyrate-producing bacterium
           SS3/4]
          Length = 211

 Score =  151 bits (382), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N EG  +PVTVL    C V   +T + +GY AVQVG  + + K 
Sbjct: 1   MKKAILATKVGMTQIFNDEGVLVPVTVLQAGPCVVTQVKTEENDGYKAVQVGFVDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F    VS K+ + EFR +  ++   V        F  G  VD T ++ GKGF
Sbjct: 61  VNKPVKGHFDKAGVSYKRFVREFRFENSEEY-NVKDEIKADIFAAGDKVDATAISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR         HG S  HR  GS G    PGRVFK K M G+MG  ++T +NLE+V
Sbjct: 120 QGAIKRLGQSRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGQMGNKKITTQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  LILVKG VPG KK S + ++++ K+
Sbjct: 179 KVDVENNLILVKGAVPGPKK-SLVTLKETVKA 209


>gi|312144247|ref|YP_003995693.1| 50S ribosomal protein L3 [Halanaerobium sp. 'sapolanicus']
 gi|311904898|gb|ADQ15339.1| 50S ribosomal protein L3 [Halanaerobium sp. 'sapolanicus']
          Length = 206

 Score =  151 bits (382), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 92/200 (46%), Positives = 122/200 (61%), Gaps = 4/200 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ +KLGMT  +   G  +PVTV+    C V   +T +K+GY AVQ+G GE K   
Sbjct: 1   MAKAILGKKLGMTQYFKDNGDVVPVTVVEAGPCVVTQIKTTEKDGYDAVQLGFGEVKKHR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP  G F S N+ PKK L EF+    D  L  GS  +   F VG +V+V+G++ GKGF
Sbjct: 61  LNKPKLGQFESRNLEPKKYLREFKGLDLD--LSEGSEVAADIFEVGDIVNVSGVSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR N      +HG S  HR+ GS G   D  RVFK KKM GRMG NRVT +NLE+V
Sbjct: 119 QGNIKRWNHHSGPMSHG-SHFHRAPGSIGS-VDARRVFKGKKMPGRMGHNRVTEENLEIV 176

Query: 181 SVDDKRGLILVKGCVPGAKK 200
            VD +R ++L+ G VPG+KK
Sbjct: 177 KVDLERNVLLIAGSVPGSKK 196


>gi|262038282|ref|ZP_06011672.1| 50S ribosomal protein L3 [Leptotrichia goodfellowii F0264]
 gi|261747749|gb|EEY35198.1| 50S ribosomal protein L3 [Leptotrichia goodfellowii F0264]
          Length = 208

 Score =  151 bits (382), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 90/208 (43%), Positives = 125/208 (60%), Gaps = 4/208 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT ++  E + IPVTV+      VV  ++ +K+GY AV +   + K KN  KP
Sbjct: 2   ILGKKIGMTQIFENE-KLIPVTVIEAGPNFVVQKKSEEKDGYNAVTLAYDDKKEKNTIKP 60

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
             G F    +SPKK L EF+V + +    +G  F        + VD+ G + GKG +G M
Sbjct: 61  EMGIFKKAGISPKKFLKEFKVAELESF-ELGQEFKVDVLEGIEFVDIVGTSKGKGTAGVM 119

Query: 125 KRHNFGGLRATHGVSISHRSHGS-TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           KRHNFGG RATHGVS +HR  GS  G       V K KKMAGR+G  +VTV+NL+VV  D
Sbjct: 120 KRHNFGGNRATHGVSRNHRLGGSNAGGAASNSNVPKGKKMAGRLGNEQVTVQNLKVVKFD 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +  L+LVKG VPG  KN +++++ S K
Sbjct: 180 AENNLLLVKGAVPGP-KNGYLVIKKSVK 206


>gi|225387237|ref|ZP_03757001.1| hypothetical protein CLOSTASPAR_00989 [Clostridium asparagiforme
           DSM 15981]
 gi|225046655|gb|EEG56901.1| hypothetical protein CLOSTASPAR_00989 [Clostridium asparagiforme
           DSM 15981]
          Length = 211

 Score =  151 bits (382), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 86/211 (40%), Positives = 124/211 (58%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT +++  G  IPVTVL    C V   +T+D +GY AVQVG  + + K 
Sbjct: 1   MKKAILATKVGMTQIFDENGVLIPVTVLQAGPCVVTQVKTVDNDGYKAVQVGFVDKRDKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G F    VS K+ + E R++  ++   V        F  G  +D T ++ GKGF
Sbjct: 61  VNKPQKGHFDKAGVSYKRYVRELRLENAEEY-SVKDEIKADIFAQGDKIDATAISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR+        HG S  HR  GS G    PGRVFK K M G+MG  ++T++NLEVV
Sbjct: 120 QGAIKRYGQSRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGQMGNKQITIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +  L+L+KG VPG KK S + ++++ K
Sbjct: 179 KVDTENNLLLIKGAVPGPKK-SLVTIKETVK 208


>gi|212716611|ref|ZP_03324739.1| hypothetical protein BIFCAT_01540 [Bifidobacterium catenulatum DSM
           16992]
 gi|225351045|ref|ZP_03742068.1| hypothetical protein BIFPSEUDO_02627 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|212660315|gb|EEB20890.1| hypothetical protein BIFCAT_01540 [Bifidobacterium catenulatum DSM
           16992]
 gi|225158501|gb|EEG71743.1| hypothetical protein BIFPSEUDO_02627 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 213

 Score =  151 bits (382), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 122/212 (57%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+ ++ +KLGM+ V++  G  +PVT++ +    V   ++ + +GY AVQ+G G+     V
Sbjct: 4   RTALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKSEESDGYKAVQLGYGQVDPTKV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G F+   V+P++ L E R    ++  P G   +   F  G LVDVTG T GKGF+
Sbjct: 64  TKPLAGHFAKAGVTPRRHLAEVRTDNAEEFEP-GQELTAELFPEGTLVDVTGTTKGKGFA 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F   R THG   + R  GS G    P R+ K K+MAGRMG    T  NL +VS
Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTNTTLNLTIVS 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D + G++ +KG +PG  K S +LVR + K A
Sbjct: 183 SDVENGVLAIKGAIPGP-KGSIVLVRSAVKGA 213


>gi|119025339|ref|YP_909184.1| 50S ribosomal protein L3 [Bifidobacterium adolescentis ATCC 15703]
 gi|154486747|ref|ZP_02028154.1| hypothetical protein BIFADO_00572 [Bifidobacterium adolescentis
           L2-32]
 gi|166233119|sp|A1A069|RL3_BIFAA RecName: Full=50S ribosomal protein L3
 gi|118764923|dbj|BAF39102.1| 50S ribosomal protein L3 [Bifidobacterium adolescentis ATCC 15703]
 gi|154084610|gb|EDN83655.1| hypothetical protein BIFADO_00572 [Bifidobacterium adolescentis
           L2-32]
          Length = 213

 Score =  151 bits (382), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 122/212 (57%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+ ++ +KLGM+ V++  G  +PVT++ +    V   ++ + +GY AVQ+G G+     V
Sbjct: 4   RTALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKSEESDGYKAVQLGYGQVDPTKV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G F+   V+P++ L E R    ++  P G   +   F  G LVDVTG T GKGF+
Sbjct: 64  TKPLAGHFAKAGVTPRRHLAEVRTDNAEEFEP-GQELTAELFPEGTLVDVTGTTKGKGFA 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F   R THG   + R  GS G    P R+ K K+MAGRMG    T  NL +VS
Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTNTALNLTIVS 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D + G++ +KG +PG  K S +LVR + K A
Sbjct: 183 SDVENGVLAIKGAIPGP-KGSIVLVRSAVKGA 213


>gi|298207727|ref|YP_003715906.1| 50S ribosomal protein L3 [Croceibacter atlanticus HTCC2559]
 gi|83850364|gb|EAP88232.1| 50S ribosomal protein L3 [Croceibacter atlanticus HTCC2559]
          Length = 205

 Score =  151 bits (382), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 86/206 (41%), Positives = 122/206 (59%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C V   RT + +GY A+Q+G  +   K  S
Sbjct: 2   SGLIGKKIGMTSIFDENGKNIPCTVIQAGPCVVTQVRTSEVDGYKALQLGFDDKADKRAS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
               G F     SPK K+ EF+  +DD    +G   +   F  G+ VDV+G + GKGF G
Sbjct: 62  NAAVGHFKKAGTSPKYKVAEFKKFEDD--FNLGDSVTVEMFKEGEFVDVSGTSKGKGFQG 119

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG+ +ATHG     R+ GS G    P RVFK  KMAG+MG  +V V+NL V+ 
Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGQMGNEKVKVQNLRVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V   + LI+VKG VPG  KNS++ ++
Sbjct: 180 VVADKNLIVVKGAVPG-HKNSYVTIQ 204


>gi|78211928|ref|YP_380707.1| 50S ribosomal protein L3 [Synechococcus sp. CC9605]
 gi|109893567|sp|Q3AMN0|RL3_SYNSC RecName: Full=50S ribosomal protein L3
 gi|78196387|gb|ABB34152.1| 50S ribosomal protein L3 [Synechococcus sp. CC9605]
          Length = 218

 Score =  151 bits (382), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++ +GR +PVT++    C++   +  D +GY AVQ+G GE + K 
Sbjct: 1   MSIGILGKKLGMSQFFDEQGRAVPVTLIEAGPCRITQLKNDDTDGYSAVQIGFGETREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G  +       + L E+RV   + L  +G   +   F  GQ VDV+G T+G+GF
Sbjct: 61  INKPAQGHLNKSGEGLLRHLREYRVDSVEGL-ELGGAITVGDFEAGQKVDVSGDTVGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     THG S +HR  GSTG    PGR++  K+MAGR GG ++T + L ++
Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLTIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +  L++VKG VPG K  + + +R + +
Sbjct: 179 KVDSEHNLLVVKGSVPG-KPGALLNIRPALR 208


>gi|329314933|gb|AEB89346.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           T0131]
          Length = 220

 Score =  151 bits (381), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 94/219 (42%), Positives = 123/219 (56%), Gaps = 11/219 (5%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY A+QVG        
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYK 60

Query: 53  AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
                 K  +KP  G     + +PK+ + EFR   D D   VG   S   F  G ++DVT
Sbjct: 61  KDAKSNKYANKPAEGHAKKADAAPKRFIREFR-NVDVDAYEVGQEVSVDTFVAGDVIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF G +KRH       +HG S  HR+ GS G   D  RVFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGGIKRHGQSRGPMSHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           TV+NLEVV VD +  +ILVKG VPG KK   + +R S K
Sbjct: 179 TVQNLEVVQVDTENKVILVKGNVPGPKK-GLVEIRTSIK 216


>gi|27468742|ref|NP_765379.1| 50S ribosomal protein L3 [Staphylococcus epidermidis ATCC 12228]
 gi|42559629|sp|Q8CRG0|RL3_STAES RecName: Full=50S ribosomal protein L3
 gi|27316290|gb|AAO05465.1|AE016750_70 50S ribosomal protein L3 [Staphylococcus epidermidis ATCC 12228]
          Length = 220

 Score =  151 bits (381), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 91/208 (43%), Positives = 119/208 (57%), Gaps = 10/208 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+QVG        
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60

Query: 53  AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
            G    K  +KP  G     + +PK+ + EFR   + D   +G   S   F  G ++DVT
Sbjct: 61  KGSKSNKYANKPAEGHAKKADTAPKRFIREFR-NVNVDEYELGQEVSVDTFETGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH  G     HG S  HR+ GS G   D  +VFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQGRGPMAHG-SHFHRAPGSVGMASDASKVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKK 200
           TV+NLEVV VD +  +ILVKG VPG KK
Sbjct: 179 TVQNLEVVQVDTENSVILVKGNVPGPKK 206


>gi|314984887|gb|EFT28979.1| 50S ribosomal protein L3 [Propionibacterium acnes HL005PA1]
          Length = 173

 Score =  151 bits (381), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 83/169 (49%), Positives = 105/169 (62%), Gaps = 2/169 (1%)

Query: 46  YMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105
           Y AVQ+G G  +  NV+KP  G F    V+P++ L E R   D     +G   +   F+ 
Sbjct: 1   YSAVQLGYGAVQAHNVTKPEAGPFEKAGVTPRRHLVELRTA-DASEYTLGQEIAADVFSE 59

Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
              VDVTG + GKG +G MKRH FGGLRATHGV   HRS GS G    PG+V K  +MAG
Sbjct: 60  SDFVDVTGTSKGKGTAGVMKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAG 119

Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           RMG  RVTV+NL+V SVD +RG++LV+G VPG  K S ++VR + K A 
Sbjct: 120 RMGVERVTVQNLQVHSVDAERGIMLVRGAVPG-PKGSLLVVRSAAKKAA 167


>gi|291457202|ref|ZP_06596592.1| 50S ribosomal protein L3 [Bifidobacterium breve DSM 20213]
 gi|291381037|gb|EFE88555.1| 50S ribosomal protein L3 [Bifidobacterium breve DSM 20213]
          Length = 213

 Score =  151 bits (381), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 118/212 (55%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R  ++ +KLGM+ V++  G  +PVT++ +    V   +T + +GY AVQ+G G      V
Sbjct: 4   RKALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKTEESDGYKAVQLGYGAIDPTKV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G F+   V+P++ L E R   D D    G   +   F  G  VDVTG T GKGF+
Sbjct: 64  TKPLAGHFAKAGVTPRRHLVEVRTD-DVDQFEAGQELAADLFEEGTEVDVTGTTKGKGFA 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F   R THG   + R  GS G    P R+ K K+MAGRMG    T +NL VVS
Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTATTQNLTVVS 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D + G+I +KG +PG  K   +LVR + K A
Sbjct: 183 ADVENGIIAIKGAIPGP-KGGIVLVRSAVKGA 213


>gi|315659227|ref|ZP_07912091.1| 50S ribosomal protein L3 [Staphylococcus lugdunensis M23590]
 gi|315495652|gb|EFU83983.1| 50S ribosomal protein L3 [Staphylococcus lugdunensis M23590]
          Length = 220

 Score =  151 bits (381), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 93/219 (42%), Positives = 123/219 (56%), Gaps = 11/219 (5%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+QVG  + +   
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60

Query: 59  ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
                 K  +KP  G       +PK+ + EFR   + D   VG   S   F  G ++DVT
Sbjct: 61  KDAKSNKYATKPAEGHAKKAGTAPKRFIREFR-NVNVDEYEVGQEVSVDTFEAGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH        HG S  HR+ GS G   D  RVFK +K  GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMAHG-SHFHRAPGSVGMASDASRVFKGQKAPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            V+NLEVV VD + G+ILVKG VPGAKK   + ++ S K
Sbjct: 179 IVQNLEVVQVDTENGVILVKGNVPGAKK-GLVEIKSSIK 216


>gi|255526578|ref|ZP_05393485.1| ribosomal protein L3 [Clostridium carboxidivorans P7]
 gi|296187266|ref|ZP_06855662.1| 50S ribosomal protein L3 [Clostridium carboxidivorans P7]
 gi|255509686|gb|EET86019.1| ribosomal protein L3 [Clostridium carboxidivorans P7]
 gi|296048137|gb|EFG87575.1| 50S ribosomal protein L3 [Clostridium carboxidivorans P7]
          Length = 209

 Score =  151 bits (381), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 127/212 (59%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +KLGMT +++  G+ +PVTV+    C V   +T +K+GY A+Q+G  + + K 
Sbjct: 1   MKKAILGKKLGMTQIFDENGKIVPVTVIEAGPCVVFQKKTTEKDGYEAIQLGFDDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+G F+    + K+ + E RV+ D     VG       F  G+ +DV+G++ GKGF
Sbjct: 61  VNKPMKGHFAKAGAALKRFVKEIRVE-DISAYEVGQEIKADVFAAGEKIDVSGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR N      +HG S  HR+ GS G   DP R FKNKK+ G MG    TV NLEV 
Sbjct: 120 QGTIKRWNAQRGPMSHG-SKFHRAPGSMGASSDPSRTFKNKKLPGHMGNVNTTVLNLEVA 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ +IL+KG VPG  K  ++++R++ K+
Sbjct: 179 KVMPEKNIILIKGGVPGPNK-GFVVIRNTVKA 209


>gi|163786190|ref|ZP_02180638.1| 50S ribosomal protein L3 [Flavobacteriales bacterium ALC-1]
 gi|159878050|gb|EDP72106.1| 50S ribosomal protein L3 [Flavobacteriales bacterium ALC-1]
          Length = 205

 Score =  151 bits (381), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 86/206 (41%), Positives = 123/206 (59%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C V   RT + +GY A+Q+G  +A  K+ +
Sbjct: 2   SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCIVTQVRTEEVDGYSALQLGFDDATEKSAT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G       S K+K+ EF+   ++  L  G   +   FT G+ VDV G + GKGF G
Sbjct: 62  KADLGHAKKAGTSVKRKVVEFKGFGEEYKL--GDAITVEQFTEGEFVDVAGTSKGKGFQG 119

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH F G+ +ATHG     R+ GS G    P RVFK  KMAGRMGG  V V+NL V  
Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGRMGGETVKVQNLRVYK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L++VKGCVPG  KNS++++ 
Sbjct: 180 VVPEKNLLVVKGCVPG-HKNSYVIIE 204


>gi|118411058|ref|YP_874453.1| 50S ribosomal protein L3 [Phaeodactylum tricornutum]
 gi|125987627|sp|A0T0H8|RK3_PHATC RecName: Full=50S ribosomal protein L3, chloroplastic
 gi|116739805|gb|ABK20676.1| 50S ribosomal protein L3 [Phaeodactylum tricornutum]
          Length = 207

 Score =  151 bits (381), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 123/209 (58%), Gaps = 2/209 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT +++  G  IPVT+L +  C +   +   K+GY ++Q+G G    K 
Sbjct: 1   MVVGLLGNKIGMTQIFDESGNIIPVTILKVGPCVITQVKNQSKDGYDSIQIGYGNVLSKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G     N+ P K L EFR+ ++ +   +G V +   FT GQLV++ G +IGKGF
Sbjct: 61  LTQPELGHLQKSNIQPLKYLKEFRINQETEFQ-IGQVLNVDSFTPGQLVNIQGKSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRHNF     THG S +HR+ GS G    PGRV   KKM+G++G    T+K L+++
Sbjct: 120 SGLQKRHNFTRGPMTHG-SKNHRAPGSIGMGTTPGRVLPGKKMSGQLGNKITTIKKLKII 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            ++ +  ++++KG VPG   N   +V  +
Sbjct: 179 QINSEENILVIKGSVPGKPGNLLSIVPSA 207


>gi|331091667|ref|ZP_08340501.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330403424|gb|EGG82983.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 226

 Score =  151 bits (381), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 91/228 (39%), Positives = 126/228 (55%), Gaps = 19/228 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK- 59
           M+  ++A K+GMT ++N +G   PVTVL    C V   +T++ +GY AVQVG  + K K 
Sbjct: 1   MKKAILATKVGMTQIFNEDGALTPVTVLQAGPCVVTQIKTVENDGYSAVQVGFVDKKDKI 60

Query: 60  ---------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
                           V+K  +G F    VS K+ + EF+ +  D+   +        F 
Sbjct: 61  VNVDKNGKKEIVHRHGVTKAEKGHFDKAGVSGKRFVREFKFENADEYT-LAQEIKADIFA 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  VD T ++ GKGF GA+KRHN      THG S  HR  GS G   DP +VFK KKM 
Sbjct: 120 AGDKVDATAISKGKGFQGAIKRHNQHRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           G MG  ++T++NLE+V VD +  LILVKG VPG KK S + +++S K+
Sbjct: 179 GHMGSKKITIQNLEIVRVDAENNLILVKGSVPGPKK-SLVTIKESVKA 225


>gi|294786411|ref|ZP_06751665.1| 50S ribosomal protein L3 [Parascardovia denticolens F0305]
 gi|315225973|ref|ZP_07867761.1| 50S ribosomal protein L3 [Parascardovia denticolens DSM 10105]
 gi|294485244|gb|EFG32878.1| 50S ribosomal protein L3 [Parascardovia denticolens F0305]
 gi|315120105|gb|EFT83237.1| 50S ribosomal protein L3 [Parascardovia denticolens DSM 10105]
          Length = 217

 Score =  151 bits (381), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 121/212 (57%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+ +V +KLGM+ +++  G  +PVT++ +    V   ++ D++GY AVQ+G G      V
Sbjct: 7   RTALVGKKLGMSQIWDENGFFVPVTLVDVSTNVVTAVKSEDRDGYKAVQLGYGAIDPTKV 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G F+   V+P++ L E R +      P G   +   F+ G  VDVTG T GKGF+
Sbjct: 67  TKPLAGHFAKAGVTPRRHLVEVRTEDAGSYQP-GQELAADTFSDGDQVDVTGTTKGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F   R THG   + R  GS G    P RV K K+MAGRMG    T + L VVS
Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSIGACATPSRVLKGKRMAGRMGHVTHTTQGLTVVS 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D + GLI +KG +PG  K + +LVR + K A
Sbjct: 186 ADVENGLIAIKGAIPGP-KGAIVLVRSAVKGA 216


>gi|238916265|ref|YP_002929782.1| large subunit ribosomal protein L3 [Eubacterium eligens ATCC 27750]
 gi|259647745|sp|C4Z2T0|RL3_EUBE2 RecName: Full=50S ribosomal protein L3
 gi|238871625|gb|ACR71335.1| large subunit ribosomal protein L3 [Eubacterium eligens ATCC 27750]
          Length = 211

 Score =  151 bits (381), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 89/213 (41%), Positives = 123/213 (57%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G   PVTVL    C V   +T++ +GY AVQVG  + + K 
Sbjct: 1   MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTVENDGYDAVQVGFADIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F    V  K+ L EF+ +   +   V        F  G  VD T ++ GKGF
Sbjct: 61  VNKPVKGHFDKAEVPYKRFLREFKFENASEY-SVKDEIKADIFAAGDKVDATAISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR         HG S  HR  GS G    PGRVFK K M G MG  R+T++NLEVV
Sbjct: 120 QGAIKRLGQSRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGHMGSKRITIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            VD +  +ILVKG VPG KK S + ++++ K+A
Sbjct: 179 RVDVENNVILVKGAVPGPKK-SLVTLKETVKAA 210


>gi|116075767|ref|ZP_01473026.1| 50S ribosomal protein L3 [Synechococcus sp. RS9916]
 gi|116067082|gb|EAU72837.1| 50S ribosomal protein L3 [Synechococcus sp. RS9916]
          Length = 218

 Score =  151 bits (381), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 81/211 (38%), Positives = 129/211 (61%), Gaps = 7/211 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++ +G+ +PVT++    C++   +T + +GY AVQ+G GE + K 
Sbjct: 1   MSIGILGKKLGMSQFFDEQGKAVPVTLIEAGPCRITQLKTSETDGYSAVQIGFGETRDKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           ++KP +G  +       + L E+RV   DD+    +G+  +   F  GQ VDV+G ++G+
Sbjct: 61  INKPAKGHLAKSGEELLRHLSEYRV---DDVSGFELGNQVTVGDFEAGQKVDVSGDSMGR 117

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF+G  KRH F     THG S +HR  GSTG    PGR++  K+MAGR GG ++T + L 
Sbjct: 118 GFAGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLT 176

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           ++ VD +R L++VKG VPG K  S + +R +
Sbjct: 177 IIKVDSERNLLVVKGSVPG-KPGSLLNIRPA 206


>gi|171741273|ref|ZP_02917080.1| hypothetical protein BIFDEN_00348 [Bifidobacterium dentium ATCC
           27678]
 gi|283455366|ref|YP_003359930.1| 50S ribosomal protein L3 [Bifidobacterium dentium Bd1]
 gi|306823568|ref|ZP_07456943.1| 50S ribosomal protein L3 [Bifidobacterium dentium ATCC 27679]
 gi|309802910|ref|ZP_07697011.1| 50S ribosomal protein L3 [Bifidobacterium dentium JCVIHMP022]
 gi|171276887|gb|EDT44548.1| hypothetical protein BIFDEN_00348 [Bifidobacterium dentium ATCC
           27678]
 gi|283102000|gb|ADB09106.1| rplC 50S ribosomal protein L3 [Bifidobacterium dentium Bd1]
 gi|304553275|gb|EFM41187.1| 50S ribosomal protein L3 [Bifidobacterium dentium ATCC 27679]
 gi|308220377|gb|EFO76688.1| 50S ribosomal protein L3 [Bifidobacterium dentium JCVIHMP022]
          Length = 213

 Score =  151 bits (381), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 122/212 (57%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+ ++ +KLGM+ V++  G  +PVT++ +    V   ++ + +GY AVQ+G G+     V
Sbjct: 4   RTALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKSEESDGYKAVQLGYGQVDPTKV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G F+   V+P++ L E R    ++  P G   +   F  G LVDVTG T GKGF+
Sbjct: 64  TKPLAGHFAKAGVTPRRHLAEVRTDNAEEFEP-GQELTAELFPEGTLVDVTGTTKGKGFA 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F   R THG   + R  GS G    P R+ K K+MAGRMG    T +NL +VS
Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTNTAQNLTIVS 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D + G++ +KG +PG  K   +LVR + K A
Sbjct: 183 SDVENGVLAIKGAIPGP-KGGIVLVRSAVKGA 213


>gi|146317731|ref|YP_001197443.1| 50S ribosomal protein L3 [Streptococcus suis 05ZYH33]
 gi|253750987|ref|YP_003024128.1| 50S ribosomal protein L3 [Streptococcus suis SC84]
 gi|253752887|ref|YP_003026027.1| 50S ribosomal protein L3 [Streptococcus suis P1/7]
 gi|253754712|ref|YP_003027852.1| 50S ribosomal protein L3 [Streptococcus suis BM407]
 gi|330831920|ref|YP_004400745.1| 50S ribosomal protein L3 [Streptococcus suis ST3]
 gi|166234601|sp|A4VSF4|RL3_STRSY RecName: Full=50S ribosomal protein L3
 gi|145688537|gb|ABP89043.1| Ribosomal protein L3 [Streptococcus suis 05ZYH33]
 gi|251815276|emb|CAZ50842.1| 50S ribosomal protein L3 [Streptococcus suis SC84]
 gi|251817176|emb|CAZ54898.1| 50S ribosomal protein L3 [Streptococcus suis BM407]
 gi|251819132|emb|CAR44223.1| 50S ribosomal protein L3 [Streptococcus suis P1/7]
 gi|292557531|gb|ADE30532.1| ribosomal protein L3 [Streptococcus suis GZ1]
 gi|319757241|gb|ADV69183.1| 50S ribosomal protein L3 [Streptococcus suis JS14]
 gi|329306143|gb|AEB80559.1| 50S ribosomal protein L3 [Streptococcus suis ST3]
          Length = 208

 Score =  150 bits (380), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 128/212 (60%), Gaps = 6/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYAAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG   +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGQEITVETFAAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFK K +AGRMGGNRVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGNRVTIQNLEVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ +IL+KG VPGAKK S I ++ + K+
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKA 206


>gi|73661972|ref|YP_300753.1| 50S ribosomal protein L3 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|82581593|sp|Q49ZG8|RL3_STAS1 RecName: Full=50S ribosomal protein L3
 gi|72494487|dbj|BAE17808.1| 50S ribosomal protein L3 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 219

 Score =  150 bits (380), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 91/219 (41%), Positives = 126/219 (57%), Gaps = 11/219 (5%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58
           M  G++ RK+GMT V+   G  IPVTV+      ++  ++ + +GY A+QVG  + +   
Sbjct: 1   MTKGILGRKIGMTQVFGENGDLIPVTVVEASQNVILQKKSEEIDGYNAIQVGYEDKQAYK 60

Query: 59  ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
                 K  +KP  G       +PK+ + EFR   + D   VG   S + F  G ++DVT
Sbjct: 61  KDSRSSKYANKPAEGHAKKAGTAPKRFIREFR-NVNVDEYEVGQEVSVNTFEAGDVIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRHN      +HG S  HR+ GS G   D  RVFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHNQARGPMSHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           TV+NLEVV +D +  +ILVKG VPG KK  ++ +  S K
Sbjct: 179 TVQNLEVVQIDAENNVILVKGNVPGPKK-GFVEITSSIK 216


>gi|313204917|ref|YP_004043574.1| LSU ribosomal protein l3p [Paludibacter propionicigenes WB4]
 gi|312444233|gb|ADQ80589.1| LSU ribosomal protein L3P [Paludibacter propionicigenes WB4]
          Length = 205

 Score =  150 bits (380), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 82/203 (40%), Positives = 123/203 (60%), Gaps = 3/203 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++ +GY AVQVG      K+ +K
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKTVETDGYEAVQVGFQTKTEKHTNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
              G F +  V+P++ L EF+  + +    +G   +   F     VDV G + GKGF G 
Sbjct: 63  AEAGIFKAAGVAPQRHLVEFKGFETE--FKLGDAITVELFEADTFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ +ATHG     R+ GS G    P RVFK  +MAGR GG++VT++NL+V+ V
Sbjct: 121 VKRHGFGGVGQATHGQHNRLRAPGSLGASSYPSRVFKGMRMAGRTGGDKVTMQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205
             +  LIL+KG VPGAK +  I+
Sbjct: 181 IPEHNLILIKGSVPGAKGSIVII 203


>gi|237666933|ref|ZP_04526918.1| 50S ribosomal protein L3 [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|237658132|gb|EEP55687.1| 50S ribosomal protein L3 [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 209

 Score =  150 bits (380), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 84/205 (40%), Positives = 121/205 (59%), Gaps = 2/205 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT +++  G+ +PVTV+    C VV  +TL+ +GY A+QVG  E + K 
Sbjct: 1   MKKAIIGKKIGMTQIFDENGKVVPVTVVEAGPCVVVQKKTLENDGYEAIQVGFEEIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G F+   VS ++ L EFR++ D     VG       F  G  VDV+ ++ GKGF
Sbjct: 61  ANKPRKGQFAKAGVSIRRTLKEFRLE-DITSYEVGQEIKADVFEAGDKVDVSAVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR N      THG S  HR+ GS G   DP R FKNK+M G MG    TV NL+VV
Sbjct: 120 QGCIKRWNQQRGPMTHG-SKFHRAPGSMGASSDPSRTFKNKRMPGHMGSVNTTVLNLQVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWIL 205
            V  ++ LIL+KG +PG  K + ++
Sbjct: 179 KVIAEKNLILIKGGIPGPNKGTVVI 203


>gi|269122581|ref|YP_003310758.1| ribosomal protein L3 [Sebaldella termitidis ATCC 33386]
 gi|268616459|gb|ACZ10827.1| ribosomal protein L3 [Sebaldella termitidis ATCC 33386]
          Length = 208

 Score =  150 bits (380), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 91/208 (43%), Positives = 124/208 (59%), Gaps = 4/208 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT ++  E + IPVTV+      V+  + ++K+GY A+ +G  E K KN  KP
Sbjct: 2   LLGKKIGMTQIFEGE-KLIPVTVIEAGPNFVIQKKNVEKDGYNALTLGYDEKKEKNTIKP 60

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
             G F    V+PKK L EFR   + D   +G       F   + VDV+G + GKG +G M
Sbjct: 61  EMGVFKKAGVTPKKFLKEFRTD-NLDSYELGQEIKVDSFEGIEFVDVSGTSKGKGTAGVM 119

Query: 125 KRHNFGGLRATHGVSISHRSHGS-TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           KRHNFGG RATHGVS +HR  GS  G       V K KKMAGR+G   VTV+NL VV  D
Sbjct: 120 KRHNFGGNRATHGVSRNHRLGGSNAGGAASNSNVPKGKKMAGRLGNENVTVQNLRVVKFD 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +  L+LVKG +PG  KN +++++ S K
Sbjct: 180 VENNLLLVKGAIPGP-KNGYLVIKKSVK 206


>gi|320538165|ref|ZP_08038060.1| 50S ribosomal protein L3 [Treponema phagedenis F0421]
 gi|320144982|gb|EFW36703.1| 50S ribosomal protein L3 [Treponema phagedenis F0421]
          Length = 207

 Score =  150 bits (380), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 88/208 (42%), Positives = 128/208 (61%), Gaps = 6/208 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V+N +G  +PVTV+ ++   VV  +  +K GY AV +G GE K K+ +K
Sbjct: 3   GLIGKKIGMTQVFNEQGHLMPVTVIQVEPNTVVALKDEEKFGYSAVVLGLGEMKEKHAAK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+  ++ P K L EFR    D  + VG           + +DVT ++ GKGF G 
Sbjct: 63  PYAGQFA--DMKPVKLLKEFR--GFDKEVSVGEKIGVEILDTTRYLDVTAVSKGKGFQGV 118

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR  FGG RA+HG S  HR  GSTG    PGR FKN KM GRMG  +VTV+NL +  +D
Sbjct: 119 VKRWGFGGGRASHG-SKFHREAGSTGQCTSPGRSFKNVKMPGRMGAEKVTVQNLRIEKID 177

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            + G+++V+G VPG KK++ + ++ + K
Sbjct: 178 PEMGVVMVRGSVPG-KKDATVFLKSAVK 204


>gi|157151310|ref|YP_001451235.1| 50S ribosomal protein L3 [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|262283583|ref|ZP_06061348.1| ribosomal protein L3 [Streptococcus sp. 2_1_36FAA]
 gi|189029485|sp|A8AZM5|RL3_STRGC RecName: Full=50S ribosomal protein L3
 gi|157076104|gb|ABV10787.1| ribosomal protein L3 [Streptococcus gordonii str. Challis substr.
           CH1]
 gi|262260640|gb|EEY79341.1| ribosomal protein L3 [Streptococcus sp. 2_1_36FAA]
          Length = 208

 Score =  150 bits (380), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 129/212 (60%), Gaps = 6/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFAAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLE+ 
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIA 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ +IL+KG VPGAKK S I ++ + K+
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKA 206


>gi|116072564|ref|ZP_01469830.1| 50S ribosomal protein L3 [Synechococcus sp. BL107]
 gi|116064451|gb|EAU70211.1| 50S ribosomal protein L3 [Synechococcus sp. BL107]
          Length = 218

 Score =  150 bits (379), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 79/197 (40%), Positives = 119/197 (60%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +GR +PVT++    C++   +  D +GY AVQ+G GE + K 
Sbjct: 1   MSIGILGKKLGMSQLFDEQGRAVPVTLIEAGPCRITQLKNDDTDGYAAVQIGFGETREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G  +       + L E+RV   D  L +G   + S F  GQ VDV+G T+G+GF
Sbjct: 61  INKPSKGHLTKSGEDLLRHLREYRVDNVDG-LELGGSITVSDFEAGQKVDVSGDTMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     THG S +HR  GS G    PGR++  K+M+GR GG + T + L ++
Sbjct: 120 AGLQKRHGFSRGPMTHG-SKNHRQPGSIGAGTTPGRIYPGKRMSGRYGGKKTTTRGLTIL 178

Query: 181 SVDDKRGLILVKGCVPG 197
            VD  R L++VKG VPG
Sbjct: 179 RVDSDRNLLVVKGSVPG 195


>gi|299830598|ref|YP_003735046.1| 50S ribosomal protein L3 [Durinskia baltica]
 gi|297384962|gb|ADI40261.1| 50S ribosomal protein L3 [Durinskia baltica]
          Length = 207

 Score =  150 bits (379), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 80/206 (38%), Positives = 121/206 (58%), Gaps = 2/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT +++  G  IPVT+L +  C V   +T  K+GY ++QVG      K+
Sbjct: 1   MSVGLLGNKIGMTQIFDETGNIIPVTILKVGPCVVTQVKTEAKDGYNSIQVGYSRVSSKS 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G     N+ P K L EFR+  D +   VG   +    ++GQ VD+ G TIGKGF
Sbjct: 61  LTQPELGHLQKSNIQPLKHLKEFRITNDQN-FEVGQTLNVDLLSLGQFVDIQGKTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRHNF     THG S +HR+ GS G    PGRV   K+M+G++G   +TVK L+V+
Sbjct: 120 TGLQKRHNFARGPMTHG-SKNHRAPGSIGMGTTPGRVLPGKRMSGQVGNKVITVKKLKVI 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
            ++ +  ++++KG VPG   N   +V
Sbjct: 179 QLNLEENILVIKGSVPGKPGNLLSIV 204


>gi|189095434|ref|YP_001936447.1| ribosomal protein L3 [Heterosigma akashiwo]
 gi|157694777|gb|ABV66053.1| 50S ribosomal protein L3 [Heterosigma akashiwo]
 gi|157778008|gb|ABV70194.1| 50S ribosomal protein L3 [Heterosigma akashiwo]
          Length = 208

 Score =  150 bits (379), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 81/201 (40%), Positives = 118/201 (58%), Gaps = 2/201 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT +++  G  +PVTV+    C V   +    +GY A+Q+G    K+KN
Sbjct: 1   MSIGILGTKIGMTQIFDENGLAVPVTVVQSGPCIVTQIKNFSTDGYNAIQIGFLAKKIKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +K  +G F+ V   P++ L EF+V+  ++   +G       F +GQ V+VTG +IGKGF
Sbjct: 61  TNKAEQGHFTKVGCQPQRILKEFKVESTENFT-LGQQIKVDCFEIGQFVNVTGRSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KR+NF     THG S +HR  GS G    PGRV   KKMAG+ G   VT+  L+V+
Sbjct: 120 SGLQKRYNFSRGPMTHG-SKNHRLPGSIGAGTTPGRVLPGKKMAGQYGNKNVTISKLKVL 178

Query: 181 SVDDKRGLILVKGCVPGAKKN 201
           ++D K  L+L+KG +PG   N
Sbjct: 179 NIDSKENLLLLKGAIPGKAGN 199


>gi|322386354|ref|ZP_08059984.1| 50S ribosomal protein L3 [Streptococcus cristatus ATCC 51100]
 gi|321269578|gb|EFX52508.1| 50S ribosomal protein L3 [Streptococcus cristatus ATCC 51100]
          Length = 208

 Score =  150 bits (379), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 130/212 (61%), Gaps = 6/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGELIPVTVVEAAPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ +IL+KG VPGAKK S + ++ + K+
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLVTIKSAVKA 206


>gi|56418641|ref|YP_145959.1| 50S ribosomal protein L3 [Geobacillus kaustophilus HTA426]
 gi|261417607|ref|YP_003251289.1| 50S ribosomal protein L3 [Geobacillus sp. Y412MC61]
 gi|297528482|ref|YP_003669757.1| 50S ribosomal protein L3 [Geobacillus sp. C56-T3]
 gi|319765265|ref|YP_004130766.1| 50S ribosomal protein L3 [Geobacillus sp. Y412MC52]
 gi|81819840|sp|Q5L3Z7|RL3_GEOKA RecName: Full=50S ribosomal protein L3
 gi|56378483|dbj|BAD74391.1| 50S ribosomal protein L3 [Geobacillus kaustophilus HTA426]
 gi|261374064|gb|ACX76807.1| 50S ribosomal protein L3 [Geobacillus sp. Y412MC61]
 gi|297251734|gb|ADI25180.1| 50S ribosomal protein L3 [Geobacillus sp. C56-T3]
 gi|317110131|gb|ADU92623.1| 50S ribosomal protein L3 [Geobacillus sp. Y412MC52]
          Length = 213

 Score =  150 bits (379), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/200 (42%), Positives = 120/200 (60%), Gaps = 3/200 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++   G  IPVTV+H     V+  +T++ +GY A+Q+G  +   K 
Sbjct: 1   MTKGILGRKIGMTQIFAENGDLIPVTVIHATPNVVLQKKTIENDGYEAIQLGFEDISEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP  G  +  N +PK+ + E R    D+   VG       F+ G++VDVTG++ GKGF
Sbjct: 61  ANKPQIGHAAKANTAPKRFIREIRGANIDEY-EVGQEVKVDIFSEGEIVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    P RVFK K + GRMGG RVT++NL++V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGSIA-PNRVFKTKNLPGRMGGERVTIQNLKIV 177

Query: 181 SVDDKRGLILVKGCVPGAKK 200
            VD +R L+L+KG VPG +K
Sbjct: 178 KVDPERNLLLIKGNVPGPRK 197


>gi|120437174|ref|YP_862860.1| 50S ribosomal protein L3 [Gramella forsetii KT0803]
 gi|166233147|sp|A0M598|RL3_GRAFK RecName: Full=50S ribosomal protein L3
 gi|117579324|emb|CAL67793.1| 50S ribosomal protein L3 [Gramella forsetii KT0803]
          Length = 203

 Score =  150 bits (379), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/205 (40%), Positives = 123/205 (60%), Gaps = 6/205 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C V   RT + +GY A+Q+G  + K   V 
Sbjct: 2   SGLIGKKIGMTSIFDENGKNIPCTVIQAGPCVVTQVRTKEVDGYEALQLGFDDKK--TVG 59

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G         K+K+ EF+   +D    +G   +  +F  G+ VD+ G + GKGF G
Sbjct: 60  KAAEGHAKKAGTVAKRKVVEFQGYNED--YKLGDSVTVEHFKEGEFVDIAGTSKGKGFQG 117

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG+ +ATHG     R+ GS G    P RVFK  KMAGRMGG RV ++NL V+ 
Sbjct: 118 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGRMGGERVKIENLRVLK 177

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           V   + L+++KGCVPG+ KNS++++
Sbjct: 178 VVADKNLLVIKGCVPGS-KNSYVII 201


>gi|210611125|ref|ZP_03288739.1| hypothetical protein CLONEX_00929 [Clostridium nexile DSM 1787]
 gi|210152112|gb|EEA83119.1| hypothetical protein CLONEX_00929 [Clostridium nexile DSM 1787]
          Length = 241

 Score =  150 bits (379), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/228 (39%), Positives = 126/228 (55%), Gaps = 19/228 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G   PVTVL    C V   +T++ +GY AVQVG  + K K 
Sbjct: 16  MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQIKTVENDGYSAVQVGFVDKKDKI 75

Query: 61  V----------------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
           V                +K  +G F    VS K+ + EF+ +  ++   +        F 
Sbjct: 76  VNKDKNGKKEIVHRHGTTKAEKGHFDKAGVSSKRFVREFKFENAEEFT-LAQEIKADIFA 134

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  VD T ++ GKGF GA+KRHN      THG S  HR  GS G   DP +VFK KKM 
Sbjct: 135 AGDKVDATAISKGKGFQGAIKRHNQHRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKMP 193

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           G MG  R+T++NLE+V VD +  LILVKG VPG KK S + +++S K+
Sbjct: 194 GHMGSKRITIQNLEIVRVDAENNLILVKGSVPGPKK-SLVTIKESVKA 240


>gi|268316408|ref|YP_003290127.1| 50S ribosomal protein L3 [Rhodothermus marinus DSM 4252]
 gi|262333942|gb|ACY47739.1| ribosomal protein L3 [Rhodothermus marinus DSM 4252]
          Length = 210

 Score =  150 bits (379), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/197 (46%), Positives = 118/197 (59%), Gaps = 3/197 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVKNV 61
           SG++ RK+GMT V++  G  IP T++  +   VV  +T + K+GY AVQ+G GE K K  
Sbjct: 2   SGMLGRKIGMTQVFDQAGNCIPCTIIQAEPNAVVQVKTAEGKDGYEAVQLGYGERKPKRT 61

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           ++ M G F    VSPK+ L EF+     D+ P   V     F  G+L+DV G+T G+GF 
Sbjct: 62  TRAMLGHFEKAGVSPKQVLREFK-NFVLDVKPGDEVRVEQLFREGELIDVVGITKGRGFQ 120

Query: 122 GAMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           G +KRH FGG+ A THG     R+ GS G    P  VFK  +MAGRMG  RV VKNL VV
Sbjct: 121 GVVKRHGFGGVGARTHGQHNRERAPGSIGASSFPSHVFKGMRMAGRMGNQRVKVKNLRVV 180

Query: 181 SVDDKRGLILVKGCVPG 197
            +  +  LILVKG VPG
Sbjct: 181 RIFPEHNLILVKGAVPG 197


>gi|45644693|gb|AAS73081.1| predicted ribosomal protein L3 [uncultured marine gamma
           proteobacterium EBAC20E09]
          Length = 202

 Score =  150 bits (379), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 81/186 (43%), Positives = 116/186 (62%), Gaps = 2/186 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           M+ ++  +G  IPVT + +    V   +T + NGY AV V +   K+ N+SK    FF  
Sbjct: 1   MSRLFLEDGESIPVTAISVCGNFVADIKTKENNGYNAV-VLSKSKKINNLSKSQSEFFKK 59

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
            N++P   L EF+V+ D D   +G   +   F VGQ VD+TG + GKG++G +KRHNF  
Sbjct: 60  NNINPGS-LSEFKVENDIDTFEIGKHMTADVFEVGQFVDITGTSKGKGYAGVIKRHNFSM 118

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
             ATHG S++HR+HGS G  Q PGRV+K KKM+G MG  + TV+NL++V +D +  ++ V
Sbjct: 119 QDATHGNSLAHRAHGSIGQCQTPGRVWKGKKMSGHMGNVQKTVQNLKIVELDVENNVVYV 178

Query: 192 KGCVPG 197
           KG VPG
Sbjct: 179 KGAVPG 184


>gi|319940060|ref|ZP_08014414.1| 50S ribosomal protein L3 [Streptococcus anginosus 1_2_62CV]
 gi|319810774|gb|EFW07101.1| 50S ribosomal protein L3 [Streptococcus anginosus 1_2_62CV]
          Length = 208

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 129/212 (60%), Gaps = 6/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGELIPVTVVEATPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLE+ 
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIA 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ +IL+KG VPGAKK S I ++ + K+
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKA 206


>gi|314934297|ref|ZP_07841656.1| 50S ribosomal protein L3 [Staphylococcus caprae C87]
 gi|313652227|gb|EFS15990.1| 50S ribosomal protein L3 [Staphylococcus caprae C87]
          Length = 220

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/208 (44%), Positives = 117/208 (56%), Gaps = 10/208 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+QVG        
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60

Query: 53  AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
            G    K  +KP  G     + +PK+ + EFR   + D   VG   S   F  G ++DVT
Sbjct: 61  KGSKSNKYANKPAEGHAKKADTAPKRFIREFR-NVNVDEYEVGQEVSVDTFETGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH        HG S  HR+ GS G   D  RVFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMGHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKK 200
           TV+NLEVV VD    +ILVKG VPG KK
Sbjct: 179 TVQNLEVVQVDTDNSVILVKGNVPGPKK 206


>gi|229818240|ref|ZP_04448522.1| hypothetical protein BIFANG_03538 [Bifidobacterium angulatum DSM
           20098]
 gi|229784491|gb|EEP20605.1| hypothetical protein BIFANG_03538 [Bifidobacterium angulatum DSM
           20098]
          Length = 216

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 121/212 (57%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R  ++ RKLGM+ V++  G  +PVT++ +    V   +T + +GY AVQ+G G+     V
Sbjct: 7   RKALLGRKLGMSQVWDENGFFVPVTLVDVSTNVVTAIKTEETDGYTAVQIGYGQIDPTKV 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G F+   V+P++ L E R + +     +G   +   F  G  VDVTG T GKGF+
Sbjct: 67  TKPLAGHFAKAGVTPRRHLVEVR-EDNATEYELGQELTAEVFEEGAEVDVTGTTKGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F   R THG   + R  GS G    P R+ K K+MAGRMG    TV+NL +VS
Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTSTVQNLTIVS 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D + G++ +KG +PG  K   +LVR + K A
Sbjct: 186 ADVENGVLAIKGAIPGP-KGGIVLVRSAVKGA 216


>gi|223042682|ref|ZP_03612731.1| 50S ribosomal protein L3 [Staphylococcus capitis SK14]
 gi|222444345|gb|EEE50441.1| 50S ribosomal protein L3 [Staphylococcus capitis SK14]
          Length = 220

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/208 (44%), Positives = 117/208 (56%), Gaps = 10/208 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+QVG        
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60

Query: 53  AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
            G    K  +KP  G     + +PK+ + EFR   + D   VG   S   F  G ++DVT
Sbjct: 61  KGSKSNKYANKPAEGHAKKADTTPKRFIREFR-NVNVDEYEVGQEVSVDTFETGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH        HG S  HR+ GS G   D  RVFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMGHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKK 200
           TV+NLEVV VD    +ILVKG VPG KK
Sbjct: 179 TVQNLEVVQVDTDNSVILVKGNVPGPKK 206


>gi|301168458|emb|CBW28048.1| 50S ribosomal protein L3 [Bacteriovorax marinus SJ]
          Length = 232

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/206 (44%), Positives = 125/206 (60%), Gaps = 8/206 (3%)

Query: 9   KLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGF 68
           K GMT +++  G  +PVTV+ L    V   +T++ +GY A QVG GE + K V KP +G 
Sbjct: 31  KAGMTRIFDENGNHVPVTVVKLIPNIVTQVKTVETDGYEAYQVGYGEKREKLVKKPTKGH 90

Query: 69  FSSVNVSPK-KKLFEFRVQ--KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
               NVS    K  E + +    DDL   G   S + FT    VDVTG+T GKGF G MK
Sbjct: 91  LKKANVSANLTKFAEIKNETVSTDDL---GKELSVANFTPETYVDVTGVTKGKGFQGVMK 147

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R+NF G  A+HG S  HR++GS G R  PGRVFK KKM G MG  + TV+N++VV V+ +
Sbjct: 148 RYNFAGGPASHG-SHFHRTNGSIGNRATPGRVFKLKKMPGHMGAVKQTVQNVKVVEVNTE 206

Query: 186 RGLILVKGCVPGAKKNSWILVRDSFK 211
           +G +L+KG +PG+ KN ++ +  + K
Sbjct: 207 KGYMLIKGSLPGS-KNGFVKIAKALK 231


>gi|78185522|ref|YP_377956.1| 50S ribosomal protein L3 [Synechococcus sp. CC9902]
 gi|109893566|sp|Q3AUW3|RL3_SYNS9 RecName: Full=50S ribosomal protein L3
 gi|78169816|gb|ABB26913.1| LSU ribosomal protein L3P [Synechococcus sp. CC9902]
          Length = 218

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 78/197 (39%), Positives = 119/197 (60%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +GR +PVT++    C++   +  D +GY AVQ+G GE + K 
Sbjct: 1   MSIGILGKKLGMSQLFDEQGRAVPVTLIEAGPCRITQLKNDDTDGYAAVQIGFGETREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G  +       + L E+RV   D  L +G   + S F  GQ VDV+G T+G+GF
Sbjct: 61  INKPSKGHLTKSGEDLLRHLREYRVDNVDG-LELGGSITVSDFEAGQKVDVSGDTMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     THG S +HR  GS G    PGR++  K+M+GR GG + T + L ++
Sbjct: 120 AGLQKRHGFSRGPMTHG-SKNHRQPGSIGAGTTPGRIYPGKRMSGRYGGKKTTTRGLTIL 178

Query: 181 SVDDKRGLILVKGCVPG 197
            +D  R L++VKG VPG
Sbjct: 179 RIDSDRNLLVVKGSVPG 195


>gi|23336501|ref|ZP_00121715.1| COG0087: Ribosomal protein L3 [Bifidobacterium longum DJO10A]
 gi|23466130|ref|NP_696733.1| 50S ribosomal protein L3 [Bifidobacterium longum NCC2705]
 gi|189440569|ref|YP_001955650.1| 50S ribosomal protein L3 [Bifidobacterium longum DJO10A]
 gi|227546476|ref|ZP_03976525.1| ribosomal protein L3 [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|239621010|ref|ZP_04664041.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|296454870|ref|YP_003662014.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. longum
           JDM301]
 gi|312133874|ref|YP_004001213.1| rplc [Bifidobacterium longum subsp. longum BBMN68]
 gi|317483450|ref|ZP_07942440.1| 50S ribosomal protein L3 [Bifidobacterium sp. 12_1_47BFAA]
 gi|322689929|ref|YP_004209663.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. infantis
           157F]
 gi|322691870|ref|YP_004221440.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|42559648|sp|Q8G417|RL3_BIFLO RecName: Full=50S ribosomal protein L3
 gi|226725135|sp|B3DQ13|RL3_BIFLD RecName: Full=50S ribosomal protein L3
 gi|23326866|gb|AAN25369.1| 50S ribosomal protein L3 [Bifidobacterium longum NCC2705]
 gi|189429004|gb|ACD99152.1| Ribosomal protein L3 [Bifidobacterium longum DJO10A]
 gi|227213025|gb|EEI80904.1| ribosomal protein L3 [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|239516111|gb|EEQ55978.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|291516469|emb|CBK70085.1| LSU ribosomal protein L3P [Bifidobacterium longum subsp. longum F8]
 gi|296184302|gb|ADH01184.1| ribosomal protein L3 [Bifidobacterium longum subsp. longum JDM301]
 gi|311773167|gb|ADQ02655.1| RplC [Bifidobacterium longum subsp. longum BBMN68]
 gi|316915136|gb|EFV36568.1| 50S ribosomal protein L3 [Bifidobacterium sp. 12_1_47BFAA]
 gi|320456726|dbj|BAJ67348.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320461265|dbj|BAJ71885.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. infantis
           157F]
          Length = 213

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/212 (39%), Positives = 118/212 (55%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R  ++ +KLGM+ V++  G  +PVT++ +    V   +T + +GY AVQ+G G      V
Sbjct: 4   RKALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKTEESDGYKAVQLGYGAIDPTKV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G F+   V+P++ L E R   D D    G   +   F  G  VDVTG T GKGF+
Sbjct: 64  TKPLAGHFAKAGVTPRRHLVEVRTD-DVDQFEAGQELAADLFEEGAEVDVTGTTKGKGFA 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F   R THG   + R  GS G    P R+ K K+MAGRMG    T +NL VVS
Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTATTQNLTVVS 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D + G++ +KG +PG  K   +LVR + K A
Sbjct: 183 ADVENGILAIKGAIPGP-KGGIVLVRSAVKGA 213


>gi|315222820|ref|ZP_07864706.1| 50S ribosomal protein L3 [Streptococcus anginosus F0211]
 gi|315188123|gb|EFU21852.1| 50S ribosomal protein L3 [Streptococcus anginosus F0211]
          Length = 208

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 129/212 (60%), Gaps = 6/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGELIPVTVVEAAPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFAAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLE+ 
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIA 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ +IL+KG VPGAKK S I ++ + K+
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKA 206


>gi|256370780|ref|YP_003108605.1| 50S ribosomal protein L3 [Candidatus Sulcia muelleri SMDSEM]
 gi|256009572|gb|ACU52932.1| 50S ribosomal subunit protein L3 [Candidatus Sulcia muelleri
           SMDSEM]
          Length = 205

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/207 (38%), Positives = 129/207 (62%), Gaps = 5/207 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT  ++ +G ++P T++    C V+  +TL K+GY + Q+G  E K+K  +K
Sbjct: 3   GIIGKKIGMTSFFDEKGLKVPCTIIVAGPCLVLQKKTLKKDGYNSYQIGFEEKKIKKTNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
            + G F     +PKKK+ EF ++K+   L  G +     F   +LVD+TG + GKGF G 
Sbjct: 63  SLLGNFKKFKSTPKKKIVEFSLKKE---LKSGDIIKVDIFNENELVDITGFSKGKGFQGV 119

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH F G+   +HG    +R+ GS G   DP RVFK  +MAGRMG  +VT+K L+++ +
Sbjct: 120 IKRHGFSGVGEKSHGQHNRYRAPGSIGAGSDPSRVFKGTRMAGRMGNKKVTIKKLKILKI 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDS 209
           D  + L+++KG VPG  KNS++ ++ +
Sbjct: 180 DLLKNLLIIKGSVPGT-KNSFLKIKKT 205


>gi|256371215|ref|YP_003109039.1| ribosomal protein L3 [Acidimicrobium ferrooxidans DSM 10331]
 gi|256007799|gb|ACU53366.1| ribosomal protein L3 [Acidimicrobium ferrooxidans DSM 10331]
          Length = 213

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 86/210 (40%), Positives = 118/210 (56%), Gaps = 2/210 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R   V  K+GMT V+    R +PVTV+ +    VV  +T +++GY AVQV  G  K + +
Sbjct: 3   RKTFVGEKVGMTQVWTEGDRAVPVTVIKVVPTWVVRTKTPERDGYEAVQVAVGRVKPQRL 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           S+P+ G F +  V    ++ E R+       P G          G  +DV G++ G GFS
Sbjct: 63  SRPVAGQFEARGVEAGARIMELRLDGASSFEP-GDQIGIEGIEPGMRLDVVGVSKGHGFS 121

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF G  A HG    HR+ GS G    P RVFK  +MAG+ G  RVT+ NLEVV 
Sbjct: 122 GGMKRHNFRGQGAAHGNHKKHRAPGSIGACATPARVFKGTRMAGQYGTERVTIHNLEVVR 181

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            + +R L+LVKG +PG  + + ++VRDS K
Sbjct: 182 AEPERQLVLVKGSIPGP-RGAIVVVRDSVK 210


>gi|297623274|ref|YP_003704708.1| 50S ribosomal protein L3 [Truepera radiovictrix DSM 17093]
 gi|297164454|gb|ADI14165.1| 50S ribosomal protein L3 [Truepera radiovictrix DSM 17093]
          Length = 206

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 86/195 (44%), Positives = 115/195 (58%), Gaps = 6/195 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  K+GMT V+  + R +PVTV+    C VV  +T + +GY AVQ+G    + K  +K
Sbjct: 3   GLLGTKVGMTQVWQGD-RLVPVTVVLAGPCPVVQRKTPETDGYSAVQLGWIAKRDKVATK 61

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G      VS ++ L EFR     D  P G   +   F  GQ VDVTG + G+G +G 
Sbjct: 62  PELGHAKKAGVSAQRHLVEFR-----DYDPEGDTVTVEIFKPGQKVDVTGTSKGRGTAGV 116

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR NF GL A+HGV   HR+ GS G R+ PGRV+K K+MAGR G  RVT   LE++ V 
Sbjct: 117 MKRWNFAGLPASHGVKKKHRAPGSIGQRKFPGRVYKGKRMAGRYGNERVTTLGLELLEVR 176

Query: 184 DKRGLILVKGCVPGA 198
               L+L+KG +PGA
Sbjct: 177 PDDNLLLIKGSIPGA 191


>gi|78780035|ref|YP_398147.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9312]
 gi|109893536|sp|Q318I4|RL3_PROM9 RecName: Full=50S ribosomal protein L3
 gi|78713534|gb|ABB50711.1| LSU ribosomal protein L3P [Prochlorococcus marinus str. MIT 9312]
          Length = 217

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 77/197 (39%), Positives = 124/197 (62%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +G  +PVT++    C+V   +T   +GY AVQ+G G +K K+
Sbjct: 1   MSIGILGKKLGMSQLFDDKGNAVPVTLIEAGPCRVTQLKTTTLDGYSAVQIGYGLSKDKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G          K L E+RV++      +G+  +   F VGQ VD++G ++G+GF
Sbjct: 61  INKPEKGHLLKSGEELLKHLKEYRVEETTSY-EIGNQITVKNFEVGQKVDISGKSMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     +HG S +HR+ GSTG    PGR++  K+MAGR GG ++T K L V+
Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVL 178

Query: 181 SVDDKRGLILVKGCVPG 197
            +DD++ L+++KG VPG
Sbjct: 179 KIDDQKNLLVIKGSVPG 195


>gi|283853153|ref|ZP_06370406.1| ribosomal protein L3 [Desulfovibrio sp. FW1012B]
 gi|283571411|gb|EFC19418.1| ribosomal protein L3 [Desulfovibrio sp. FW1012B]
          Length = 210

 Score =  149 bits (377), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 86/204 (42%), Positives = 118/204 (57%), Gaps = 2/204 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT ++  +G  IPVTV+    C V   +T +K+GY A+Q+G  +   + V+K
Sbjct: 6   GILGRKLGMTRIFGDDGSIIPVTVIEAGPCPVTQVKTAEKDGYNAMQIGFDQIPERKVNK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G          + L E R+         G   +   F  G+ V VTG +IGKGF+G 
Sbjct: 66  PEKGHLDKAGRGYYRVLKEIRLD-GPSAFEQGMDVTVDIFAPGETVKVTGTSIGKGFAGV 124

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR NF GL+ THG   +HRS GS G   +PG+V K KKMAG MG   VT+  +E+V V 
Sbjct: 125 MKRWNFAGLKKTHGTEKAHRSGGSIGNNTEPGKVMKGKKMAGHMGARTVTMLGIEIVDVR 184

Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207
            +  LILVKG VPG  +N  ++VR
Sbjct: 185 PEMNLILVKGQVPGP-RNCVVMVR 207


>gi|325261494|ref|ZP_08128232.1| 50S ribosomal protein L3 [Clostridium sp. D5]
 gi|324032948|gb|EGB94225.1| 50S ribosomal protein L3 [Clostridium sp. D5]
          Length = 226

 Score =  149 bits (377), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 125/228 (54%), Gaps = 19/228 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK- 59
           M+  ++A K+GMT ++N +G   PVTVL    C V   +T D +GY AVQVG  + K K 
Sbjct: 1   MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTADNDGYSAVQVGFADKKEKI 60

Query: 60  ---------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
                           V+K  +G F    VS K+ + EFR +  ++   +        F 
Sbjct: 61  VTKDKSGKKEIAHRNGVTKAEKGHFDKAGVSGKRYVKEFRFENAEEYT-LAQEIKADIFE 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  +D T ++ GKGF GA+KRHN      THG S  HR  GS G   DP +VFK KKM 
Sbjct: 120 AGDKIDATAVSKGKGFQGAIKRHNQSRGPMTHG-SKFHRHAGSNGSASDPSKVFKGKKMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           G+MG  ++TV+NLEVV VD +  L+LVKG VPG KK   + ++++ K+
Sbjct: 179 GQMGNKKITVQNLEVVRVDAENNLLLVKGSVPGPKK-CLVTLKETVKA 225


>gi|295135701|ref|YP_003586377.1| 50S ribosomal protein L3 [Zunongwangia profunda SM-A87]
 gi|294983716|gb|ADF54181.1| 50S ribosomal protein L3 [Zunongwangia profunda SM-A87]
          Length = 203

 Score =  149 bits (377), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 82/206 (39%), Positives = 127/206 (61%), Gaps = 6/206 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C +   RT + +GY A+Q+G  + K  N  
Sbjct: 2   SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCVITQVRTNEVDGYEALQLGFDDKKTAN-- 59

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G      V+ ++K+ EF+  + D    +G   +  +F  G+ VD++G + GKGF G
Sbjct: 60  KAATGHAKKAGVAAQRKVVEFQGFEGD--YKLGDTINVEHFKEGEFVDISGTSKGKGFQG 117

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG+ ++THG     R+ GS G    P RVFK  +MAGRMGG +V V+NL V+ 
Sbjct: 118 VVKRHGFGGVGQSTHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGEKVKVENLRVLK 177

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L++VKGCVPG  KNS++++R
Sbjct: 178 VVAEKNLLVVKGCVPG-HKNSYVIIR 202


>gi|326203896|ref|ZP_08193758.1| 50S ribosomal protein L3 [Clostridium papyrosolvens DSM 2782]
 gi|325985994|gb|EGD46828.1| 50S ribosomal protein L3 [Clostridium papyrosolvens DSM 2782]
          Length = 212

 Score =  149 bits (377), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/213 (40%), Positives = 128/213 (60%), Gaps = 4/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT +++  G  IPVTV+      VV  +T++ +GY A++VG  +   K 
Sbjct: 1   MKKAMLGKKIGMTQIFDENGLVIPVTVVEAGPLTVVQKKTVETDGYNALKVGYQKVAEKK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG-SVFSPSYFTVGQLVDVTGMTIGKG 119
           +SKP  G FS   ++P K L EFR++ D     VG  + +   F  G  +DV+G++ GKG
Sbjct: 61  LSKPALGQFSKTKLAPMKYLREFRLE-DISSYEVGQEIKAEDMFQSGDKIDVSGLSKGKG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR+   G   THG S+ HR  GS     +P RVFK KK+ G MG +  TV+NLEV
Sbjct: 120 FQGTIKRYGQKGGPKTHG-SMYHRRVGSMSANTNPARVFKGKKLPGHMGMDNTTVQNLEV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R LILVKG +PG  K   ++++ + KS
Sbjct: 179 VRVDAERNLILVKGALPGP-KGGLLVIKSTVKS 210


>gi|113953361|ref|YP_729667.1| 50S ribosomal protein L3 [Synechococcus sp. CC9311]
 gi|123031873|sp|Q0ID05|RL3_SYNS3 RecName: Full=50S ribosomal protein L3
 gi|113880712|gb|ABI45670.1| ribosomal protein L3 [Synechococcus sp. CC9311]
          Length = 218

 Score =  149 bits (377), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 127/209 (60%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++ +G+ +PVT++    C++   ++ + +GY AVQ+G GE + K 
Sbjct: 1   MSIGILGKKLGMSQFFDEQGKAVPVTLIEAGPCRITQLKSSETDGYQAVQIGFGEIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G  +       + L E+RV  D D + +G   +   F  GQ VDV+G T+G+GF
Sbjct: 61  INKPAKGHLAKSGEDLVRHLCEYRVD-DLDGIQLGGAVTVGDFAAGQKVDVSGDTMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     THG S +HR  GS G    PGR++  K+M+GR GG ++T + L ++
Sbjct: 120 AGLQKRHGFSRGPMTHG-SKNHRQPGSIGAGTTPGRIYPGKRMSGRYGGKKITTRGLTIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            +D +R L++VKG VPG K  S + +R +
Sbjct: 179 KIDSERNLLVVKGSVPG-KPGSLLNIRPA 206


>gi|327438278|dbj|BAK14643.1| ribosomal protein L3 [Solibacillus silvestris StLB046]
          Length = 209

 Score =  149 bits (377), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 128/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  ++++ +GY A+Q+G  + +VK 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKSVETDGYEAIQLGFEDKRVKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EFR   +     VG       F  G ++DVTG+T GKGF
Sbjct: 61  SNKPEQGHVAKANTAPKRFIREFR-NLEAATYEVGQEVKVEIFAEGDVIDVTGVTKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       +HG S  HR  GS G    P RVFK KK+ G+MGG  VT++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKQKKLPGQMGGTVVTIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPG+KK + + V+ + KS
Sbjct: 178 KVDVERNLLLVKGNVPGSKK-ALVTVKTAIKS 208


>gi|320352917|ref|YP_004194256.1| 50S ribosomal protein L3P [Desulfobulbus propionicus DSM 2032]
 gi|320121419|gb|ADW16965.1| LSU ribosomal protein L3P [Desulfobulbus propionicus DSM 2032]
          Length = 210

 Score =  149 bits (377), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/197 (43%), Positives = 119/197 (60%), Gaps = 3/197 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT VY+  GR IPVTV+    C ++  +T++K GY A+QVG  E K   ++K
Sbjct: 6   GILGRKLGMTRVYDENGRSIPVTVIEAGPCTILQKKTVEKEGYNAIQVGFLEKKETRMNK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF-TVGQLVDVTGMTIGKGFSG 122
           P  G            + EFRV  + D+  VG   + S   ++G LVD++G + G+GF G
Sbjct: 66  PEVGHCKRSGGKGFYYIKEFRVT-NPDVYEVGQQITVSEIVSIGDLVDISGKSKGRGFQG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRH F G R THG S  HR+ GS GC   P RV K KK+ GRMG   +T KNL ++ +
Sbjct: 125 VIKRHGFAGGRTTHG-SDFHRAPGSIGCSAWPSRVLKGKKLPGRMGNESMTQKNLRIIDI 183

Query: 183 DDKRGLILVKGCVPGAK 199
            ++  ++LV+G VPGAK
Sbjct: 184 RNEDNVLLVRGTVPGAK 200


>gi|257125036|ref|YP_003163150.1| ribosomal protein L3 [Leptotrichia buccalis C-1013-b]
 gi|257048975|gb|ACV38159.1| ribosomal protein L3 [Leptotrichia buccalis C-1013-b]
          Length = 208

 Score =  149 bits (377), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/208 (40%), Positives = 124/208 (59%), Gaps = 4/208 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT ++  E + IPVTV+      +   +T +K GY A+ +  G+ + KN +KP
Sbjct: 2   ILGKKIGMTQIFEDE-KLIPVTVIEAGTNFITQIKTEEKEGYNAITLAYGDKREKNTTKP 60

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
             G F    V+PK+ L EF+V    D   +G           + VD++G + GKG +G M
Sbjct: 61  ELGIFKKAGVTPKRFLKEFKVANPADF-ALGQEIKVDVLEGIEFVDISGTSKGKGTAGVM 119

Query: 125 KRHNFGGLRATHGVSISHRSHGS-TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           KRHNFGG RA+HGVS +HR  GS  G       V K KKMAGR+G  +VTV+NL+V+  D
Sbjct: 120 KRHNFGGNRASHGVSRNHRLGGSNAGGAASNSNVPKGKKMAGRLGAEKVTVQNLQVIKFD 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +  L+LVKG VPG  KN +++++ S K
Sbjct: 180 VENSLLLVKGAVPGP-KNGYLVIKKSVK 206


>gi|195952643|ref|YP_002120933.1| ribosomal protein L3 [Hydrogenobaculum sp. Y04AAS1]
 gi|226730524|sp|B4U744|RL3_HYDS0 RecName: Full=50S ribosomal protein L3
 gi|195932255|gb|ACG56955.1| ribosomal protein L3 [Hydrogenobaculum sp. Y04AAS1]
          Length = 232

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/196 (43%), Positives = 118/196 (60%), Gaps = 2/196 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGM  V+  +G  IPVT + ++   VV  ++ + +GY A+QVG+   K     K
Sbjct: 3   GLIGKKLGMMRVFLNDGTAIPVTAIKVEPNYVVYIKSSETDGYNAIQVGSIPLKQSRFKK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           PM G F   N++P K L EFRV  D     +G       F+ G+LVD+ G + G+GF+G 
Sbjct: 63  PMVGHFKKANLTPLKYLKEFRVD-DVSSFALGQELGVDIFSPGELVDIVGRSKGRGFTGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR +FGG   +HG    HR+ GS G R DPGRV+K+K+MAGR G   + V+ L VV V 
Sbjct: 122 MKRWDFGGFPKSHGHRY-HRAVGSVGNRTDPGRVWKSKRMAGRHGNETIRVQALVVVDVL 180

Query: 184 DKRGLILVKGCVPGAK 199
             +G+ILV G VPG K
Sbjct: 181 KDKGIILVNGSVPGHK 196


>gi|212704583|ref|ZP_03312711.1| hypothetical protein DESPIG_02645 [Desulfovibrio piger ATCC 29098]
 gi|212671982|gb|EEB32465.1| hypothetical protein DESPIG_02645 [Desulfovibrio piger ATCC 29098]
          Length = 209

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/206 (40%), Positives = 119/206 (57%), Gaps = 2/206 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           + G++ RKLGMT ++  +G  +PVTV+    C V   +T++ +GY A+Q+   E K K+V
Sbjct: 4   KMGILGRKLGMTRIFAGDGAAVPVTVIQAGPCPVTQVKTVETDGYNALQIALTEDKEKHV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SK M+G F+       ++L E R++   ++ P G   +   F  G +V VT  +IGKG+ 
Sbjct: 64  SKAMKGHFAKAGTGLYRELREIRLENAPEMEP-GQELTVEMFATGDVVKVTAKSIGKGYQ 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G M+R NF G + THG    HR++GS G    PG VFK +KMAG  G   VT   L +V 
Sbjct: 123 GRMRRWNFAGSKDTHGCEKVHRNNGSIGNNTFPGHVFKGRKMAGHWGNETVTEMGLVIVD 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V     +ILVKG VPG  KN  +L+R
Sbjct: 183 VRPADNVILVKGSVPGP-KNGLVLIR 207


>gi|71276484|ref|ZP_00652759.1| Ribosomal protein L3 [Xylella fastidiosa Dixon]
 gi|71162661|gb|EAO12388.1| Ribosomal protein L3 [Xylella fastidiosa Dixon]
          Length = 186

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 86/179 (48%), Positives = 112/179 (62%), Gaps = 2/179 (1%)

Query: 34  QVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLL 92
           +VV  +T D +GY A+QV  G  +   V+KP  G F+   V   + L+EFRV+K      
Sbjct: 8   RVVQIKTSDVDGYDAIQVTVGSRRSVLVNKPESGHFAKAKVEAGRGLWEFRVEKTQLGSY 67

Query: 93  PVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
            VGS    S F VGQ VD+ G+T GKGF G +KRHNF    ATHG S+SHR+ GS G RQ
Sbjct: 68  SVGSEVGLSIFAVGQKVDIQGITKGKGFQGTIKRHNFRMGDATHGNSLSHRAPGSLGQRQ 127

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            PGRVF  KKM+G MG  R +V+NLEV+ +D +R LI V+G +PGA     +L+R + K
Sbjct: 128 TPGRVFPGKKMSGHMGAVRQSVQNLEVIKIDVERFLIAVRGAIPGASGGD-VLIRSASK 185


>gi|297618384|ref|YP_003703543.1| 50S ribosomal protein L3 [Syntrophothermus lipocalidus DSM 12680]
 gi|297146221|gb|ADI02978.1| 50S ribosomal protein L3 [Syntrophothermus lipocalidus DSM 12680]
          Length = 212

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 129/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +  G++  KLGMT +++   R   VTV+    C V+  +T+  +GY A+QVG G  K   
Sbjct: 5   VEKGLLGVKLGMTQLFDENDRATAVTVVEAGPCIVLQKKTVATDGYNAIQVGFGSVKESK 64

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP++G  ++ NV P + + EFRV+  DD   VG       F  G ++DVTG++ GKGF
Sbjct: 65  ITKPLKGHLANANVKPVRFIREFRVENIDD-YQVGQEIRVDIFKEGDIIDVTGISKGKGF 123

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNF      HG S  HR  G+ G +  P RVFK +K+ GR+GG +VTV+ L VV
Sbjct: 124 AGGIKRHNFQRGAMAHG-SKYHRRPGALGAK-GPARVFKGRKLPGRLGGEKVTVQRLRVV 181

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ ++L+KG +PG ++   + +++S K+
Sbjct: 182 KVYPEKNILLIKGAIPGPRR-GLVTIKNSAKA 212


>gi|33863999|ref|NP_895559.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9313]
 gi|42559599|sp|Q7V542|RL3_PROMM RecName: Full=50S ribosomal protein L3
 gi|33635583|emb|CAE21907.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9313]
          Length = 218

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 127/209 (60%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++ +GR IPVT++    C++   +T + +GY AVQ+G G+ + K 
Sbjct: 1   MSIGILGKKLGMSQFFDDQGRAIPVTLIEAGPCRITQLKTSEIDGYAAVQIGFGDTREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G  +       K L E+RV+  + L  +G+  +   F  GQ VDV+G T+G+GF
Sbjct: 61  INKPSKGHLTKSGEVLLKHLREYRVEGLEGL-ELGAAITVGSFEAGQKVDVSGDTMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     +HG S +HR  GSTG    PGR++  K+MAGR GG + T + L ++
Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKRTTRGLTIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            VD  R L++VKG VPG K  + + +R +
Sbjct: 179 KVDSNRNLLVVKGSVPG-KPGALLNIRPA 206


>gi|88704378|ref|ZP_01102092.1| Ribosomal protein L3 [Congregibacter litoralis KT71]
 gi|88701429|gb|EAQ98534.1| Ribosomal protein L3 [Congregibacter litoralis KT71]
          Length = 184

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/170 (47%), Positives = 106/170 (62%), Gaps = 1/170 (0%)

Query: 42  DKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS 101
           D +GY ++QV AG  K   VSK   G F+   V   + L+EFR+  +++   VG+  +  
Sbjct: 15  DSDGYRSIQVTAGSRKAAKVSKSEAGLFAKAGVEAGRGLWEFRLSAEEEGFEVGAELTVE 74

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F  GQ VDV G + GKGF G +KR NF    ATHG S+SHR+ GS G  Q PGRVFK K
Sbjct: 75  RFEEGQKVDVAGKSKGKGFQGVIKRWNFSMQDATHGNSLSHRAPGSIGQCQTPGRVFKGK 134

Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           KM+G+MG   VTV+ LE+V VD +R L+L+KG VPGA     ++VR + K
Sbjct: 135 KMSGQMGNTNVTVQGLEIVRVDAERNLLLIKGAVPGAPGGD-VVVRPAVK 183


>gi|256544506|ref|ZP_05471879.1| 50S ribosomal protein L3 [Anaerococcus vaginalis ATCC 51170]
 gi|256399831|gb|EEU13435.1| 50S ribosomal protein L3 [Anaerococcus vaginalis ATCC 51170]
          Length = 209

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/199 (43%), Positives = 122/199 (61%), Gaps = 3/199 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+S +   K+GMT V + +G   PVTVL  D   +V  ++ + +GY ++Q+G  + K KN
Sbjct: 1   MKS-IFTTKVGMTQVIDEDGVVTPVTVLKADENVIVQVKSEEVDGYNSIQIGYHDKKEKN 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V KP++G F     S K+ L E R+ +  +L P G   S   F  G+LVD+T ++ GKG 
Sbjct: 60  VKKPIKGHFDKAGASYKRFLREVRLDEKSELNP-GDTLSVDQFEEGELVDITAISKGKGT 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR N+G   A+HG S SHR  G+     DP RVFK +K +G+MG  RVTV+NL+VV
Sbjct: 119 QGAIKRWNYGRGPASHG-SKSHRVAGARAAGSDPARVFKGRKGSGKMGHERVTVQNLKVV 177

Query: 181 SVDDKRGLILVKGCVPGAK 199
            V+ +   ILVKG VPG K
Sbjct: 178 KVNTEDSYILVKGAVPGPK 196


>gi|159904219|ref|YP_001551563.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9211]
 gi|226730549|sp|A9BCP7|RL3_PROM4 RecName: Full=50S ribosomal protein L3
 gi|159889395|gb|ABX09609.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9211]
          Length = 219

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 82/211 (38%), Positives = 128/211 (60%), Gaps = 7/211 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++ +GR +PVT++    C++   ++L  +GY AVQ+G G  + K 
Sbjct: 1   MSIGILGKKLGMSQFFDDKGRSVPVTLIEAGPCRITQLKSLATDGYSAVQIGYGFTREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           V+KP +G  S       + L E+RV   DDL    +G+  +   F  GQ VDV+G ++G+
Sbjct: 61  VNKPFKGHLSKSGEGFLRHLHEYRV---DDLGVYELGAKITVGNFEAGQKVDVSGNSMGR 117

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF+G  KRH+F     +HG S +HR  GSTG    PGR++  K+MAGR GG ++T + L 
Sbjct: 118 GFAGYQKRHSFSRGPMSHG-SKNHRQPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLT 176

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           ++ +D  R L++VKG VPG K  S + +R +
Sbjct: 177 IMKIDSDRNLLVVKGSVPG-KPGSLLNIRPA 206


>gi|242620043|ref|YP_003002047.1| 50S ribosomal protein L3 [Aureococcus anophagefferens]
 gi|239997288|gb|ACS36811.1| 50S ribosomal protein L3 [Aureococcus anophagefferens]
          Length = 210

 Score =  149 bits (376), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 82/201 (40%), Positives = 117/201 (58%), Gaps = 2/201 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT + +  G  +PVT+L    C V   +T++ +GY A Q+G  +   K 
Sbjct: 1   MPLGILGNKIGMTQIVDDLGNLVPVTILRAGPCTVTQIKTVETDGYSAAQLGYAQVTSKV 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP  G    V     + L E+++  D   L +G       F+ G +VDVTG +IGKGF
Sbjct: 61  LTKPQIGHLEKVGAPLLRYLHEYKIS-DTSELSLGQTIGVDIFSAGSVVDVTGKSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KR+NFG    THG S +HR+ GS G    PGRV+  KKMAG +G  +VT+K L+V+
Sbjct: 120 AGLQKRYNFGRGPMTHG-SKNHRAPGSIGAGTTPGRVYPGKKMAGHLGAKQVTIKKLKVL 178

Query: 181 SVDDKRGLILVKGCVPGAKKN 201
            VD +  LI+VKG VPG   N
Sbjct: 179 IVDAENNLIIVKGAVPGKPGN 199


>gi|126662264|ref|ZP_01733263.1| 50S ribosomal protein L3 [Flavobacteria bacterium BAL38]
 gi|126625643|gb|EAZ96332.1| 50S ribosomal protein L3 [Flavobacteria bacterium BAL38]
          Length = 205

 Score =  149 bits (376), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/206 (42%), Positives = 128/206 (62%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ RK+GMT +++  G+ IP TV+    C V   RT + +GY A+Q+G  +   K   
Sbjct: 2   SGLIGRKIGMTSIFDENGKNIPCTVIECGPCVVTQVRTNEVDGYSAIQLGFDDKAEKRSI 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F     + KKK+ EF+  +++    +G V +   F  G+ VDV G++ GKGF G
Sbjct: 62  KAELGHFKKAGTAAKKKVVEFKGFEEE--YKLGDVIAVDLFAEGEFVDVLGVSKGKGFQG 119

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG+ +ATHG     R+ GS G    P RVFK  +MAGRMGG+ VTV+NL V+ 
Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGGDNVTVQNLRVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L++VKGCVPG  KNS+++++
Sbjct: 180 VVGEKNLLVVKGCVPG-HKNSYVIIQ 204


>gi|322388401|ref|ZP_08062004.1| 50S ribosomal protein L3 [Streptococcus infantis ATCC 700779]
 gi|321140714|gb|EFX36216.1| 50S ribosomal protein L3 [Streptococcus infantis ATCC 700779]
          Length = 208

 Score =  149 bits (376), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 129/212 (60%), Gaps = 6/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY A+QVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNVEGLEVGAEITVETFAAGDIVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFK K +AGRMGG+RVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ +IL+KG VPGAKK S I ++ + K+
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKA 206


>gi|206602675|gb|EDZ39156.1| Ribosomal protein L3 [Leptospirillum sp. Group II '5-way CG']
          Length = 207

 Score =  149 bits (376), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 79/202 (39%), Positives = 124/202 (61%), Gaps = 4/202 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RKLGMT +Y   G+ +PVT++    C+++  +T +K GY A Q+G      K+++KP
Sbjct: 4   LLGRKLGMTQIYLPSGQAVPVTIVEAGPCEILQVKTSEKEGYSAAQIGYFPISPKHLNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
            RG       +  + + EF+V+++      GS+ +   F  G  +D+TG + GKGF+G M
Sbjct: 64  ERGHQQKYAKNLYRYVREFKVEENTQ--SPGSILTVEIFQEGDSLDITGQSKGKGFAGVM 121

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH+F G  ATHG S+ HR  GS G    P RV KNKK+ G MG  R+TVKNL++++V  
Sbjct: 122 KRHHFRGGDATHG-SMFHREPGSIGSSAYPSRVLKNKKLPGHMGDKRITVKNLKLIAVKP 180

Query: 185 KRGLILVKGCVPGAKKNSWILV 206
           +  L+ +KG +PG+   S+++V
Sbjct: 181 EANLLFIKGAIPGS-NGSFVVV 201


>gi|289435898|ref|YP_003465770.1| hypothetical protein lse_2537 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289172142|emb|CBH28688.1| rplC [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 209

 Score =  149 bits (375), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 128/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY AVQ+G  + + K 
Sbjct: 1   MTKGILGRKVGMTQVFTENGELIPVTVIEAAQNVVLQKKTVETDGYEAVQIGFEDKRAKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EFR   + D   +G+      F  G ++D TG++ GKGF
Sbjct: 61  SNKPEQGHVAKANTTPKRFIREFR-DVNLDEYEIGAEVKVDVFAEGDIIDATGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK + GRMGG ++T++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQITIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD ++ ++LVKG VPGAKK + + ++ + K+
Sbjct: 178 KVDVEKNVLLVKGNVPGAKK-ALVQIKTATKA 208


>gi|309389933|gb|ADO77813.1| LSU ribosomal protein L3P [Halanaerobium praevalens DSM 2228]
          Length = 206

 Score =  149 bits (375), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 90/200 (45%), Positives = 121/200 (60%), Gaps = 4/200 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ +KLGMT  +   G  +PVTV+    C V   +T +K+GY +VQ+G GE K   
Sbjct: 1   MAKAILGKKLGMTQYFKDNGELVPVTVVEAGPCVVTQIKTTEKDGYNSVQLGFGEVKKHR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP  G F S N+ PKK L EF+    D  L  GS      F VG+ +DV+G++ GKGF
Sbjct: 61  LNKPELGQFESRNLEPKKHLREFKGL--DMELSEGSEIKADIFEVGEKIDVSGISKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR N      THG S  HR+ GS G   D  RV+K  KM GRMG +RVT +NLE+V
Sbjct: 119 AGNIKRWNHHRGPMTHG-SHFHRAPGSIGA-VDARRVYKGFKMPGRMGHDRVTERNLEIV 176

Query: 181 SVDDKRGLILVKGCVPGAKK 200
            VD +R ++L+ G VPGAKK
Sbjct: 177 KVDLERNVLLIAGPVPGAKK 196


>gi|27904942|ref|NP_778068.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|42559626|sp|Q89A68|RL3_BUCBP RecName: Full=50S ribosomal protein L3
 gi|27904340|gb|AAO27173.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 214

 Score =  149 bits (375), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 84/210 (40%), Positives = 126/210 (60%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT ++  EG   PVT++ +   ++   +T+ ++ Y AVQV  G  K   + K
Sbjct: 3   GLIGQKLGMTRIFTEEGTVYPVTIIKVKENRITQIKTISRDLYHAVQVTTGIKKSNKLLK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P  G F    V   K L+EF++     +   +G   +   F+  + VD+ G + GKGF G
Sbjct: 63  PEIGHFLKSGVKIGKGLWEFKLTNSSINDFKIGQSLNLELFSNIKKVDIIGTSKGKGFCG 122

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR+ GS G  Q PGRVFK KKMAG +G +RVTV+NL++V +
Sbjct: 123 TVKRWNFHTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHLGNHRVTVQNLDIVKI 182

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D  + +ILVKG VPG    + I+++ + K+
Sbjct: 183 DLNQEIILVKGAVPGYSGGN-IIIKPAIKT 211


>gi|309799058|ref|ZP_07693311.1| ribosomal protein L3 [Streptococcus infantis SK1302]
 gi|308117293|gb|EFO54716.1| ribosomal protein L3 [Streptococcus infantis SK1302]
          Length = 208

 Score =  149 bits (375), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 129/212 (60%), Gaps = 6/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY A+QVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNVEGLEVGAEITVETFAAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFK K +AGRMGG+RVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ +IL+KG VPGAKK S I ++ + K+
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKA 206


>gi|303233143|ref|ZP_07319816.1| 50S ribosomal protein L3 [Atopobium vaginae PB189-T1-4]
 gi|302480728|gb|EFL43815.1| 50S ribosomal protein L3 [Atopobium vaginae PB189-T1-4]
          Length = 221

 Score =  149 bits (375), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/207 (42%), Positives = 122/207 (58%), Gaps = 3/207 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M + ++ RK+GMT V++     +PVTV+    C V   +T   +GY A+Q+G GE   K+
Sbjct: 16  MVTTILGRKIGMTQVWDENDNVVPVTVIQAGPCVVSQVKTKSSDGYDAIQIGFGEVSSKH 75

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM G F + NV P + L E RV+  ++    G   +   F     VDVTG++ GKGF
Sbjct: 76  VNKPMEGHFKAHNVEPLRHLCEVRVENGEE-HACGDTITVKDFADATAVDVTGVSKGKGF 134

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF      HG S + R  GS G    PGRV K   MAG MG  R+TVKNL++V
Sbjct: 135 QGTIKRWNFSSGPKAHG-SRNQREPGSIGQCAYPGRVRKGLHMAGHMGDERITVKNLKLV 193

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207
            +D+++ L+LVKG VPG  KN+ + +R
Sbjct: 194 RIDEEQNLLLVKGAVPGG-KNALLTIR 219


>gi|15900145|ref|NP_344749.1| 50S ribosomal protein L3 [Streptococcus pneumoniae TIGR4]
 gi|15902232|ref|NP_357782.1| 50S ribosomal protein L3 [Streptococcus pneumoniae R6]
 gi|111658801|ref|ZP_01409432.1| hypothetical protein SpneT_02000098 [Streptococcus pneumoniae
           TIGR4]
 gi|116516725|ref|YP_815712.1| 50S ribosomal protein L3 [Streptococcus pneumoniae D39]
 gi|148983607|ref|ZP_01816926.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP3-BS71]
 gi|148987945|ref|ZP_01819408.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP6-BS73]
 gi|148992785|ref|ZP_01822428.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP9-BS68]
 gi|148996630|ref|ZP_01824348.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP11-BS70]
 gi|149001686|ref|ZP_01826659.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP14-BS69]
 gi|149005958|ref|ZP_01829687.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP18-BS74]
 gi|149011077|ref|ZP_01832382.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP19-BS75]
 gi|149017897|ref|ZP_01834356.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP23-BS72]
 gi|168483845|ref|ZP_02708797.1| ribosomal protein L3 [Streptococcus pneumoniae CDC1873-00]
 gi|168486024|ref|ZP_02710532.1| ribosomal protein L3 [Streptococcus pneumoniae CDC1087-00]
 gi|168489686|ref|ZP_02713885.1| ribosomal protein L3 [Streptococcus pneumoniae SP195]
 gi|168492162|ref|ZP_02716305.1| ribosomal protein L3 [Streptococcus pneumoniae CDC0288-04]
 gi|168493902|ref|ZP_02718045.1| ribosomal protein L3 [Streptococcus pneumoniae CDC3059-06]
 gi|168576364|ref|ZP_02722247.1| ribosomal protein L3 [Streptococcus pneumoniae MLV-016]
 gi|169833378|ref|YP_001693741.1| 50S ribosomal protein L3 [Streptococcus pneumoniae Hungary19A-6]
 gi|182683188|ref|YP_001834935.1| 50S ribosomal protein L3 [Streptococcus pneumoniae CGSP14]
 gi|194397396|ref|YP_002036910.1| 50S ribosomal protein L3 [Streptococcus pneumoniae G54]
 gi|221231113|ref|YP_002510265.1| 50S ribosomal protein L3 [Streptococcus pneumoniae ATCC 700669]
 gi|225853815|ref|YP_002735327.1| 50S ribosomal protein L3 [Streptococcus pneumoniae JJA]
 gi|225855974|ref|YP_002737485.1| 50S ribosomal protein L3 [Streptococcus pneumoniae P1031]
 gi|225858063|ref|YP_002739573.1| 50S ribosomal protein L3 [Streptococcus pneumoniae 70585]
 gi|225860251|ref|YP_002741760.1| 50S ribosomal protein L3 [Streptococcus pneumoniae Taiwan19F-14]
 gi|237649723|ref|ZP_04523975.1| 50S ribosomal protein L3 [Streptococcus pneumoniae CCRI 1974]
 gi|237821421|ref|ZP_04597266.1| 50S ribosomal protein L3 [Streptococcus pneumoniae CCRI 1974M2]
 gi|270292000|ref|ZP_06198215.1| ribosomal protein L3 [Streptococcus sp. M143]
 gi|289168732|ref|YP_003447001.1| 50S ribosomal protein L3 [Streptococcus mitis B6]
 gi|293364347|ref|ZP_06611073.1| 50S ribosomal protein L3 [Streptococcus oralis ATCC 35037]
 gi|298230366|ref|ZP_06964047.1| 50S ribosomal protein L3 [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298255987|ref|ZP_06979573.1| 50S ribosomal protein L3 [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298502023|ref|YP_003723963.1| 50S ribosomal protein L3 [Streptococcus pneumoniae TCH8431/19A]
 gi|303255095|ref|ZP_07341171.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS455]
 gi|303259261|ref|ZP_07345239.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP-BS293]
 gi|303261016|ref|ZP_07346965.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP14-BS292]
 gi|303263344|ref|ZP_07349267.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS397]
 gi|303265509|ref|ZP_07351409.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS457]
 gi|303267933|ref|ZP_07353735.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS458]
 gi|306825986|ref|ZP_07459322.1| 50S ribosomal protein L3 [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|306828783|ref|ZP_07461975.1| 50S ribosomal protein L3 [Streptococcus mitis ATCC 6249]
 gi|307066886|ref|YP_003875852.1| hypothetical protein SPAP_0257 [Streptococcus pneumoniae AP200]
 gi|307126429|ref|YP_003878460.1| 50S ribosomal protein L3 [Streptococcus pneumoniae 670-6B]
 gi|307702686|ref|ZP_07639638.1| 50S ribosomal protein L3 (BL3) [Streptococcus oralis ATCC 35037]
 gi|307704065|ref|ZP_07640994.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK597]
 gi|307709910|ref|ZP_07646357.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK564]
 gi|307711054|ref|ZP_07647476.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK321]
 gi|315612332|ref|ZP_07887245.1| 50S ribosomal protein L3 [Streptococcus sanguinis ATCC 49296]
 gi|322375039|ref|ZP_08049553.1| 50S ribosomal protein L3 [Streptococcus sp. C300]
 gi|322377230|ref|ZP_08051722.1| 50S ribosomal protein L3 [Streptococcus sp. M334]
 gi|322391199|ref|ZP_08064671.1| 50S ribosomal protein L3 [Streptococcus peroris ATCC 700780]
 gi|331267136|ref|YP_004326766.1| 50S ribosomal protein L3 [Streptococcus oralis Uo5]
 gi|42559631|sp|Q8CWV8|RL3_STRR6 RecName: Full=50S ribosomal protein L3
 gi|42559682|sp|Q97SV5|RL3_STRPN RecName: Full=50S ribosomal protein L3
 gi|122279402|sp|Q04MN6|RL3_STRP2 RecName: Full=50S ribosomal protein L3
 gi|226730574|sp|B5E6F5|RL3_STRP4 RecName: Full=50S ribosomal protein L3
 gi|226730575|sp|B1I8J8|RL3_STRPI RecName: Full=50S ribosomal protein L3
 gi|226730576|sp|B2IS40|RL3_STRPS RecName: Full=50S ribosomal protein L3
 gi|254803693|sp|C1CAL2|RL3_STRP7 RecName: Full=50S ribosomal protein L3
 gi|254803694|sp|B8ZKF7|RL3_STRPJ RecName: Full=50S ribosomal protein L3
 gi|254803696|sp|C1CC06|RL3_STRZJ RecName: Full=50S ribosomal protein L3
 gi|254803697|sp|C1CI97|RL3_STRZP RecName: Full=50S ribosomal protein L3
 gi|254803698|sp|C1CP88|RL3_STRZT RecName: Full=50S ribosomal protein L3
 gi|14971677|gb|AAK74389.1| ribosomal protein L3 [Streptococcus pneumoniae TIGR4]
 gi|15457732|gb|AAK98992.1| 50S Ribosomal protein L3 [Streptococcus pneumoniae R6]
 gi|116077301|gb|ABJ55021.1| ribosomal protein L3 [Streptococcus pneumoniae D39]
 gi|147757205|gb|EDK64244.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP11-BS70]
 gi|147760144|gb|EDK67133.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP14-BS69]
 gi|147762314|gb|EDK69275.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP18-BS74]
 gi|147764713|gb|EDK71643.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP19-BS75]
 gi|147923754|gb|EDK74866.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP3-BS71]
 gi|147926409|gb|EDK77482.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP6-BS73]
 gi|147928511|gb|EDK79526.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP9-BS68]
 gi|147931461|gb|EDK82439.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP23-BS72]
 gi|168995880|gb|ACA36492.1| ribosomal protein L3 [Streptococcus pneumoniae Hungary19A-6]
 gi|172042867|gb|EDT50913.1| ribosomal protein L3 [Streptococcus pneumoniae CDC1873-00]
 gi|182628522|gb|ACB89470.1| 50S ribosomal protein L3 [Streptococcus pneumoniae CGSP14]
 gi|183570883|gb|EDT91411.1| ribosomal protein L3 [Streptococcus pneumoniae CDC1087-00]
 gi|183571866|gb|EDT92394.1| ribosomal protein L3 [Streptococcus pneumoniae SP195]
 gi|183573583|gb|EDT94111.1| ribosomal protein L3 [Streptococcus pneumoniae CDC0288-04]
 gi|183576220|gb|EDT96748.1| ribosomal protein L3 [Streptococcus pneumoniae CDC3059-06]
 gi|183577906|gb|EDT98434.1| ribosomal protein L3 [Streptococcus pneumoniae MLV-016]
 gi|194357063|gb|ACF55511.1| 50S ribosomal protein L3 [Streptococcus pneumoniae G54]
 gi|220673573|emb|CAR68059.1| 50S ribosomal protein L3 [Streptococcus pneumoniae ATCC 700669]
 gi|225720422|gb|ACO16276.1| ribosomal protein L3 [Streptococcus pneumoniae 70585]
 gi|225722972|gb|ACO18825.1| ribosomal protein L3 [Streptococcus pneumoniae JJA]
 gi|225725081|gb|ACO20933.1| ribosomal protein L3 [Streptococcus pneumoniae P1031]
 gi|225726716|gb|ACO22567.1| ribosomal protein L3 [Streptococcus pneumoniae Taiwan19F-14]
 gi|270279528|gb|EFA25370.1| ribosomal protein L3 [Streptococcus sp. M143]
 gi|288908299|emb|CBJ23141.1| 50S ribosomal protein L3 [Streptococcus mitis B6]
 gi|291317193|gb|EFE57620.1| 50S ribosomal protein L3 [Streptococcus oralis ATCC 35037]
 gi|298237618|gb|ADI68749.1| 50S ribosomal protein L3 [Streptococcus pneumoniae TCH8431/19A]
 gi|301793482|emb|CBW35855.1| 50S ribosomal protein L3 [Streptococcus pneumoniae INV104]
 gi|301799358|emb|CBW31893.1| 50S ribosomal protein L3 [Streptococcus pneumoniae OXC141]
 gi|301801153|emb|CBW33826.1| 50S ribosomal protein L3 [Streptococcus pneumoniae INV200]
 gi|302597925|gb|EFL64995.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS455]
 gi|302637853|gb|EFL68339.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP14-BS292]
 gi|302639679|gb|EFL70136.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP-BS293]
 gi|302642629|gb|EFL72974.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS458]
 gi|302644949|gb|EFL75196.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS457]
 gi|302647117|gb|EFL77341.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS397]
 gi|304428961|gb|EFM32049.1| 50S ribosomal protein L3 [Streptococcus mitis ATCC 6249]
 gi|304431702|gb|EFM34682.1| 50S ribosomal protein L3 [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|306408423|gb|ADM83850.1| hypothetical protein SPAP_0257 [Streptococcus pneumoniae AP200]
 gi|306483491|gb|ADM90360.1| ribosomal protein L3 [Streptococcus pneumoniae 670-6B]
 gi|307617016|gb|EFN96194.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK321]
 gi|307619281|gb|EFN98410.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK564]
 gi|307622355|gb|EFO01363.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK597]
 gi|307623802|gb|EFO02787.1| 50S ribosomal protein L3 (BL3) [Streptococcus oralis ATCC 35037]
 gi|315315313|gb|EFU63352.1| 50S ribosomal protein L3 [Streptococcus sanguinis ATCC 49296]
 gi|321145952|gb|EFX41341.1| 50S ribosomal protein L3 [Streptococcus peroris ATCC 700780]
 gi|321280539|gb|EFX57578.1| 50S ribosomal protein L3 [Streptococcus sp. C300]
 gi|321281943|gb|EFX58951.1| 50S ribosomal protein L3 [Streptococcus sp. M334]
 gi|326683808|emb|CBZ01426.1| 50S ribosomal protein L3 [Streptococcus oralis Uo5]
 gi|327390628|gb|EGE88968.1| 50S ribosomal protein L3 [Streptococcus pneumoniae GA04375]
 gi|332075874|gb|EGI86341.1| 50S ribosomal protein L3 [Streptococcus pneumoniae GA17570]
 gi|332076655|gb|EGI87117.1| 50S ribosomal protein L3 [Streptococcus pneumoniae GA17545]
 gi|332077510|gb|EGI87971.1| 50S ribosomal protein L3 [Streptococcus pneumoniae GA41301]
          Length = 208

 Score =  149 bits (375), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 129/212 (60%), Gaps = 6/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY A+QVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNVEGLEVGAEITVETFAAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFK K +AGRMGG+RVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ +IL+KG VPGAKK S I ++ + K+
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKA 206


>gi|294790411|ref|ZP_06755569.1| 50S ribosomal protein L3 [Scardovia inopinata F0304]
 gi|294458308|gb|EFG26661.1| 50S ribosomal protein L3 [Scardovia inopinata F0304]
          Length = 216

 Score =  149 bits (375), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 84/210 (40%), Positives = 118/210 (56%), Gaps = 2/210 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R  +V +KLGM+ V++  G  +PVT++ +    +   +T + +GY AVQ+G G      V
Sbjct: 7   RKALVGKKLGMSQVWDDNGFFVPVTLVDVSTNIITAVKTDETDGYKAVQLGYGAIDPTKV 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G F+   V+P++ L E R +  D   P G       F  GQ VDVTG T GKGF+
Sbjct: 67  TKPLAGHFAKAGVTPRRHLVEVRTEDADSFEP-GQELPVDTFADGQRVDVTGTTKGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F   R THG   + R  GS G    P R+ K K+MAGRMG N  T + L VVS
Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGNNTHTTQGLTVVS 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +   G++ +KG VPG  K + +LVR + K
Sbjct: 186 SNVDSGILAIKGAVPGP-KGAIVLVRSAVK 214


>gi|317476356|ref|ZP_07935605.1| 50S ribosomal protein L3 [Bacteroides eggerthii 1_2_48FAA]
 gi|316907382|gb|EFV29087.1| 50S ribosomal protein L3 [Bacteroides eggerthii 1_2_48FAA]
          Length = 195

 Score =  149 bits (375), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 81/197 (41%), Positives = 119/197 (60%), Gaps = 3/197 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V++ EG+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +KP+ G F  
Sbjct: 1   MTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYQAVQLGFQDKKEKHTTKPLMGHFKK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             V+PKK L EF+  + +  L +G   +   F     VDV G + GKGF G +KRH FGG
Sbjct: 61  AGVTPKKHLAEFK--EFETELNLGDTVTVELFEGADFVDVVGTSKGKGFQGVVKRHGFGG 118

Query: 132 L-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
           + + THG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V  +  L+L
Sbjct: 119 VGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKVIAEHNLLL 178

Query: 191 VKGCVPGAKKNSWILVR 207
           +KG VPG K +  I+ +
Sbjct: 179 IKGSVPGCKGSIVIIEK 195


>gi|260584416|ref|ZP_05852163.1| 50S ribosomal protein L3 [Granulicatella elegans ATCC 700633]
 gi|260157934|gb|EEW93003.1| 50S ribosomal protein L3 [Granulicatella elegans ATCC 700633]
          Length = 210

 Score =  149 bits (375), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 86/212 (40%), Positives = 127/212 (59%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT  +   G  IPVTV+ +    V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGKKVGMTQYFTEAGELIPVTVVEVTPNVVLQLKTIENDGYEAVQLGFDDLREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            ++P +G  +  N +PK+ + EF   +  +   VG   +   F  G +VDVTG + GKGF
Sbjct: 61  SNRPAKGHVAKANATPKRFIREFNNVELSEY-EVGQEITVDVFKAGDIVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    P RVFK K + G+MGGNR+T++NLEVV
Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGGASFPSRVFKGKALPGQMGGNRITIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R +IL+KG VPG+KK S + ++ + KS
Sbjct: 179 KVDAERNVILIKGNVPGSKK-SLVEIKTAIKS 209


>gi|281358743|ref|ZP_06245219.1| 50S ribosomal protein L3 [Victivallis vadensis ATCC BAA-548]
 gi|281314770|gb|EFA98807.1| 50S ribosomal protein L3 [Victivallis vadensis ATCC BAA-548]
          Length = 218

 Score =  149 bits (375), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 88/217 (40%), Positives = 124/217 (57%), Gaps = 5/217 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT VY+ +G  IPVTV+    C V   +T++++GY AVQ+G GE K KNV+K
Sbjct: 3   GLIGRKVGMTQVYDEKGVLIPVTVVQAGPCVVTDVKTVERDGYSAVQLGFGERKAKNVTK 62

Query: 64  PMRGFFSSVNVSPKKK---LFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
              G  +   V+  K    L E R    D+    G+V +   F     +DV G T G+GF
Sbjct: 63  ARAGHLAKAGVTGDKLPSVLREIRTAAGDEAPAPGTVLNADVFEANDYLDVVGTTKGRGF 122

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G ++R+ FGG RA+HG  +  R  GS GC + PG V K K+M G MG    TV+NL+VV
Sbjct: 123 QGVVRRYRFGGGRASHG-GVWTRRTGSIGCCEWPGNVIKGKRMPGHMGNVPRTVQNLQVV 181

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
            V  +  ++LVKG +PGA     +L+R + K     K
Sbjct: 182 RVMAEDNVLLVKGAIPGA-NGGILLIRSAIKKQTGAK 217


>gi|296875404|ref|ZP_06899478.1| 50S ribosomal protein L3 [Streptococcus parasanguinis ATCC 15912]
 gi|312866990|ref|ZP_07727201.1| 50S ribosomal protein L3 [Streptococcus parasanguinis F0405]
 gi|319945835|ref|ZP_08020085.1| 50S ribosomal protein L3 [Streptococcus australis ATCC 700641]
 gi|296433597|gb|EFH19370.1| 50S ribosomal protein L3 [Streptococcus parasanguinis ATCC 15912]
 gi|311097472|gb|EFQ55705.1| 50S ribosomal protein L3 [Streptococcus parasanguinis F0405]
 gi|319747900|gb|EFW00144.1| 50S ribosomal protein L3 [Streptococcus australis ATCC 700641]
          Length = 208

 Score =  149 bits (375), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 129/212 (60%), Gaps = 6/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY A+QVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNVEGLEVGAEITVDTFEAGDIVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFK K +AGRMGG+RVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ +IL+KG VPGAKK S I ++ + K+
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKA 206


>gi|213693088|ref|YP_002323674.1| ribosomal protein L3 [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|254803655|sp|B7GNE0|RL3_BIFLI RecName: Full=50S ribosomal protein L3
 gi|213524549|gb|ACJ53296.1| ribosomal protein L3 [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|320459266|dbj|BAJ69887.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. infantis
           ATCC 15697]
          Length = 213

 Score =  149 bits (375), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 118/212 (55%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R  ++ +KLGM+ V++  G  +PVT++ +    V   +T + +GY AVQ+G G      V
Sbjct: 4   RKALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKTEESDGYKAVQLGYGAIDPTKV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G F+   V+P++ L E R   D D    G   +   F  G  VDVTG T GKGF+
Sbjct: 64  TKPLAGHFAKAGVTPRRHLVEVRTD-DVDQFEAGQELAADLFEEGAEVDVTGTTKGKGFA 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F   R THG   + R  GS G    P R+ K K+MAGRMG    T +NL +VS
Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTATTQNLIIVS 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D + G++ +KG +PG  K   +LVR + K A
Sbjct: 183 ADVENGILAIKGAIPGP-KGGIVLVRSAVKGA 213


>gi|294055221|ref|YP_003548879.1| 50S ribosomal protein L3 [Coraliomargarita akajimensis DSM 45221]
 gi|293614554|gb|ADE54709.1| 50S ribosomal protein L3 [Coraliomargarita akajimensis DSM 45221]
          Length = 214

 Score =  148 bits (374), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 122/212 (57%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT V++   R +PVTV+    C V   +T +K+GY AVQ+G    K   
Sbjct: 1   MKVALLGKKIGMTQVFDENNRLVPVTVIEAGPCPVTQVKTSEKDGYSAVQIGYRAQKEHR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SK   G F    V P  +L EFRV  + + L VG V +   F  GQ +DV G T G+GF
Sbjct: 61  LSKAALGHFKKAGVEPLAELREFRVAAEGE-LNVGDVLTVEKFEAGQKIDVIGTTKGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR  F G  A+HG S+ HR  GS G  Q PG V K KKM G MG  + TV+NL VV
Sbjct: 120 QGVVKRWGFHGGPASHG-SMFHRRGGSYGMCQWPGHVIKGKKMPGHMGDKQRTVQNLTVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V   + LILVKG +PG+ +   + VR + K+
Sbjct: 179 KVLADKNLILVKGSIPGS-RGGLVTVRTAIKN 209


>gi|307708060|ref|ZP_07644528.1| ribosomal protein L3 [Streptococcus mitis NCTC 12261]
 gi|307615845|gb|EFN95050.1| ribosomal protein L3 [Streptococcus mitis NCTC 12261]
          Length = 208

 Score =  148 bits (374), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 129/212 (60%), Gaps = 6/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY A+QVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGELIPVTVIEAAPNVVLQVKTVETDGYNAIQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNVEGLEVGAEITVETFAAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFK K +AGRMGG+RVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ +IL+KG VPGAKK S I ++ + K+
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKA 206


>gi|315925256|ref|ZP_07921470.1| 50S ribosomal protein L3 [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315621490|gb|EFV01457.1| 50S ribosomal protein L3 [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 211

 Score =  148 bits (374), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 88/215 (40%), Positives = 124/215 (57%), Gaps = 7/215 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT ++  +G  +PVTV+    C VV  +TL+ +GY AVQ+  G+ K KN
Sbjct: 1   MKKAIIGKKIGMTQIFQEDGTVVPVTVVQAGPCTVVQKKTLENDGYEAVQLAYGDIKEKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V KP++G F    V   + L EFR+  D   L  G       F  G  VDV+G + GKG+
Sbjct: 61  VVKPVKGHFDKYGVDYARTLREFRLD-DCASLEAGQKIKADVFEAGDKVDVSGKSKGKGY 119

Query: 121 SGAMKRHNFGGLRA--THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           +GA+KR  +G  R    HG S  HRS GS G    P RV K K +AG+MG   VT  NLE
Sbjct: 120 AGAIKR--WGQQRGPMAHG-SKYHRSAGSMGASAYPARVPKGKHLAGQMGNKNVTALNLE 176

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           ++ VD +  L+L+KG VPG  +   + V+ S K+A
Sbjct: 177 IIQVDAENNLLLIKGAVPGP-RGGVVSVKSSVKAA 210


>gi|317153958|ref|YP_004122006.1| 50S ribosomal protein L3 [Desulfovibrio aespoeensis Aspo-2]
 gi|316944209|gb|ADU63260.1| 50S ribosomal protein L3 [Desulfovibrio aespoeensis Aspo-2]
          Length = 210

 Score =  148 bits (374), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 83/204 (40%), Positives = 121/204 (59%), Gaps = 2/204 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT ++  +G    VTV+    C V+  +T DK GY A+Q+G      + V+K
Sbjct: 6   GILGKKLGMTRIFKEDGSVCCVTVIEAGPCPVMQIKTQDKEGYNALQLGYDTIAERKVNK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G  +       + L EF ++  D    +G   +   F+ G+ V VTG + GKGF G 
Sbjct: 66  PLKGHMAKAGKDMYRHLREFPLEGVDGY-ELGQEITVDIFSAGEKVKVTGTSKGKGFQGV 124

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF G RA+HG    HR  GS G    PGRV+KNKKM G+MG  RVT+ N+E+V V 
Sbjct: 125 MKRHNFSGSRASHGAEKVHRVPGSVGNATYPGRVWKNKKMPGQMGNARVTLSNVEIVDVR 184

Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207
            +  +++VKG VPG   N ++++R
Sbjct: 185 PEDNVLVVKGQVPGP-NNGFVMIR 207


>gi|295398288|ref|ZP_06808330.1| 50S ribosomal protein L3 [Aerococcus viridans ATCC 11563]
 gi|294973427|gb|EFG49212.1| 50S ribosomal protein L3 [Aerococcus viridans ATCC 11563]
          Length = 211

 Score =  148 bits (374), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 87/215 (40%), Positives = 126/215 (58%), Gaps = 7/215 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT  +   G  +PVTV+      V+  +T + +GY A+QVG    +   
Sbjct: 1   MTKGILGKKVGMTQFFTETGELVPVTVIEAQPNVVLQAKTNETDGYEAIQVGFDNKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
            +KP +G  +    +PK+ + EF   KD +L    VGS      F  G +VDVTG + GK
Sbjct: 61  ANKPHKGHVAKAETTPKRFIKEF---KDVELGDYEVGSEIKVDIFQAGDIVDVTGTSKGK 117

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF GA+KRH       +HG S  HRS GS G   D  +VFK K + G+ GG ++T++NLE
Sbjct: 118 GFQGAIKRHGQSRGPMSHG-SHYHRSPGSMGMASDASKVFKGKNLPGQTGGTQITIQNLE 176

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           +V VD +R +IL+KG VPGAKK S + ++ + KSA
Sbjct: 177 IVKVDAERNVILIKGNVPGAKK-SMVTIKSAVKSA 210


>gi|90994504|ref|YP_536994.1| ribosomal protein L3 [Porphyra yezoensis]
 gi|109893085|sp|Q1XDH4|RK3_PORYE RecName: Full=50S ribosomal protein L3, chloroplastic
 gi|90819068|dbj|BAE92437.1| 50S ribosomal protein L3 [Porphyra yezoensis]
          Length = 205

 Score =  148 bits (374), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 76/197 (38%), Positives = 117/197 (59%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT  ++  G  IPVTV+ +  C +   + +  +GY A+QVG  +   + 
Sbjct: 1   MSVGILGTKVGMTQFFDEAGLSIPVTVIQVGPCVITQIKAVSTDGYNAIQVGYKQVAEQK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+ G        P K L E+ ++  DD   V  + S   F VGQ ++V+  ++GKGF
Sbjct: 61  LNKPLLGHLKKSQAPPLKYLREYEMKSTDDF-EVSQILSTDLFQVGQKINVSSRSVGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRH+F     +HG S +HR  GS G    PGRV+  K MAG++G  +VT+KNL++V
Sbjct: 120 SGYQKRHHFSRGPMSHG-SKNHRQPGSIGAGTTPGRVYPGKNMAGQLGNKKVTIKNLQIV 178

Query: 181 SVDDKRGLILVKGCVPG 197
           S++ +  L++VKG VPG
Sbjct: 179 SINSENDLLIVKGAVPG 195


>gi|307694152|ref|ZP_07636389.1| 50S ribosomal protein L3 [Ruminococcaceae bacterium D16]
          Length = 241

 Score =  148 bits (374), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 81/219 (36%), Positives = 120/219 (54%), Gaps = 3/219 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ +K+GMT +++  G  +PVTV+    C VV  +T +K+GY A+Q+G      + 
Sbjct: 1   MEKAIIGKKIGMTQIFDEAGHVVPVTVIEAGPCTVVQKKTAEKDGYEAIQLGYQTVPERK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLF-EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++KP  G      +   KK+  EFR+  D     +G       F  G  VDVTG++ G G
Sbjct: 61  LTKPEVGHQKKAGLEELKKVLKEFRLD-DCSKYEIGDELKADVFAAGDRVDVTGISKGHG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           + G +KRH    L+ THG    HR  G+     DP R+FK K  AG+MG  +VTV NL+V
Sbjct: 120 YQGVIKRHGASRLKETHGTGPVHRHAGAMAANSDPSRIFKGKIGAGQMGNEQVTVMNLDV 179

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           +SVD + G+I V+G +PG  K   + +R+S K     KG
Sbjct: 180 ISVDAELGIIAVRGAIPGP-KGGVVFLRNSVKKYFEPKG 217


>gi|291549416|emb|CBL25678.1| LSU ribosomal protein L3P [Ruminococcus torques L2-14]
          Length = 227

 Score =  148 bits (374), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 92/229 (40%), Positives = 127/229 (55%), Gaps = 20/229 (8%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M+  ++A K+GMT ++N E G  IPVTVL    C V   +T++ +GY AVQVG  + K K
Sbjct: 1   MKKAILATKVGMTQIFNEEDGVLIPVTVLQAGPCVVTQVKTVENDGYSAVQVGYVDKKEK 60

Query: 60  ----------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
                            V+K  +G F    VS K+ + EFR +  ++   +        F
Sbjct: 61  IVTKDNSGKKSIAHRNGVTKAEKGHFDKAGVSGKRYVKEFRFENAEEYT-LAQEIKADIF 119

Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
             G  +D T ++ GKGF GA+KRHN      THG S  HR  GS G   DP +VFK KKM
Sbjct: 120 AAGDKIDATAVSKGKGFQGAIKRHNQSRGPMTHG-SKFHRHAGSNGSASDPSKVFKGKKM 178

Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            G+MG  ++TV+NLEVV VD +  LILVKG VPG KK   + ++++ K+
Sbjct: 179 PGQMGNKKITVQNLEVVRVDAENNLILVKGSVPGPKK-CLVTIKETVKA 226


>gi|328958728|ref|YP_004376114.1| 50S ribosomal protein L3 [Carnobacterium sp. 17-4]
 gi|328675052|gb|AEB31098.1| 50S ribosomal protein L3 [Carnobacterium sp. 17-4]
          Length = 210

 Score =  148 bits (374), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 93/216 (43%), Positives = 127/216 (58%), Gaps = 10/216 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+   G  IPVTV+      V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGKKVGMTQVFTESGELIPVTVIEATPNVVLQVKTIETDGYEAVQLGYQDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLL---PVGSVFSPSYFTVGQLVDVTGMTIG 117
            +KP  G  +  N +PK+ + EF    DD  L    VG       F  G +V+VTG T G
Sbjct: 61  SNKPAMGHVAKANATPKRFIREF----DDVELGDYEVGQEVKVDAFKAGDIVNVTGTTKG 116

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF G +KRH       +HG S  HR  GS G   DP RVFK   + GRMGGNRVT+KNL
Sbjct: 117 KGFQGVIKRHGHSRGPMSHG-SRHHRRPGSMGP-VDPNRVFKRTLLPGRMGGNRVTIKNL 174

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           EVV VD ++ +IL+KG VPG+KK S I ++ +F+ A
Sbjct: 175 EVVRVDVEKNVILIKGNVPGSKK-SLIQIKSAFQKA 209


>gi|124514443|gb|EAY55956.1| ribosomal protein L3 [Leptospirillum rubarum]
          Length = 207

 Score =  148 bits (374), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 79/202 (39%), Positives = 124/202 (61%), Gaps = 4/202 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RKLGMT +Y   G+ +PVT++    C+V+  +T +K GY A Q+G      K+++KP
Sbjct: 4   LLGRKLGMTQIYLPSGQAVPVTIVEAGPCEVLQVKTSEKEGYSAAQIGYFPVSPKHLNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
            RG       +  + + EF+V+++      G++ +   F  G  +D+TG + GKGF+G M
Sbjct: 64  ERGHQQKYAKNLYRYVREFKVEENTQA--PGNILTVEIFQEGDSLDITGQSKGKGFAGVM 121

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH+F G  ATHG S+ HR  GS G    P RV KNKK+ G MG  R+TVKNL++++V  
Sbjct: 122 KRHHFRGGDATHG-SMFHREPGSIGSSAYPSRVLKNKKLPGHMGDKRITVKNLKLIAVKP 180

Query: 185 KRGLILVKGCVPGAKKNSWILV 206
           +  L+ +KG +PG+   S+++V
Sbjct: 181 EANLLFIKGAIPGS-NGSFVVV 201


>gi|148268690|ref|YP_001247633.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus JH9]
 gi|189029484|sp|A5IV34|RL3_STAA9 RecName: Full=50S ribosomal protein L3
 gi|147741759|gb|ABQ50057.1| LSU ribosomal protein L3P [Staphylococcus aureus subsp. aureus JH9]
          Length = 220

 Score =  148 bits (373), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 93/219 (42%), Positives = 122/219 (55%), Gaps = 11/219 (5%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY A+QVG        
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYK 60

Query: 53  AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
                 K  +KP  G     + +PK+ + EFR   D D   VG   S   F  G ++DVT
Sbjct: 61  KDAKSNKYANKPAEGHAKKADAAPKRFIREFR-NVDVDAYEVGQEVSVDTFVAGDVIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH       +H  S  HR+  S G   D  RVFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQSRGPMSHS-SHFHRAPDSVGMASDASRVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           TV+NLEVV VD +  +ILVKG VPG KK   + +R S K
Sbjct: 179 TVQNLEVVQVDTENKVILVKGNVPGPKK-GLVEIRTSIK 216


>gi|296120747|ref|YP_003628525.1| ribosomal protein L3 [Planctomyces limnophilus DSM 3776]
 gi|296013087|gb|ADG66326.1| ribosomal protein L3 [Planctomyces limnophilus DSM 3776]
          Length = 245

 Score =  148 bits (373), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 93/238 (39%), Positives = 133/238 (55%), Gaps = 27/238 (11%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  +G  IPVTV+    C V+  RT++++GY AVQ+G  +   + 
Sbjct: 14  MSCGLLGRKVGMTQVFTPQGEAIPVTVIECGPCVVLQIRTVERDGYSAVQLGFSDKPRRL 73

Query: 61  VSKPMRGFFSSVN-------------------VSPKKKLFEFRVQKDD-DLLPVGSVFSP 100
            S+  RG  ++++                     PK+ + EFRV  ++     VG V + 
Sbjct: 74  ASRSERGHVAAIDSKRRKSLAAAGVALAEKADCEPKRFVREFRVTPEEASAFTVGQVLTV 133

Query: 101 SY-FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
           S  F   + VDV G + G+GF+G MKRHNF G  A+HGV   HRS GSTG   DPG+VFK
Sbjct: 134 SQIFGEVKHVDVVGTSKGRGFAGVMKRHNFHGTCASHGVKKVHRSGGSTGQSTDPGKVFK 193

Query: 160 NKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
             KM G  G  +VTV+ L+VV  DD+  ++LV+G VPG     ++ VR +     NCK
Sbjct: 194 GTKMPGHYGDAQVTVRRLQVVRADDENNVLLVRGAVPGY-SGGFVRVRKT-----NCK 245


>gi|138893785|ref|YP_001124238.1| 50S ribosomal protein L3 [Geobacillus thermodenitrificans NG80-2]
 gi|196251024|ref|ZP_03149706.1| ribosomal protein L3 [Geobacillus sp. G11MC16]
 gi|166233146|sp|A4IJI9|RL3_GEOTN RecName: Full=50S ribosomal protein L3
 gi|134265298|gb|ABO65493.1| Ribosomal protein L3 [Geobacillus thermodenitrificans NG80-2]
 gi|196209496|gb|EDY04273.1| ribosomal protein L3 [Geobacillus sp. G11MC16]
          Length = 211

 Score =  148 bits (373), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 90/219 (41%), Positives = 125/219 (57%), Gaps = 8/219 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY A+Q+G  +   K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTIENDGYEAIQLGFEDLSTKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP  G  +  N +PK+ + E R    ++   VG       F+ G +VDVTG++ GKGF
Sbjct: 61  ANKPQIGHAAKANTAPKRFIREIRGANVNEY-EVGQEVKVDIFSEGDIVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFK K + GRMGG RVT++NL++V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGAIA-PNRVFKTKNLPGRMGGERVTIQNLKIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            VD +R L+L+KG VPG +K   I+     KSAV  K K
Sbjct: 178 KVDPERNLLLIKGNVPGPRKGLVIV-----KSAVKAKAK 211


>gi|70725803|ref|YP_252717.1| 50S ribosomal protein L3 [Staphylococcus haemolyticus JCSC1435]
 gi|82581592|sp|Q4L8B4|RL3_STAHJ RecName: Full=50S ribosomal protein L3
 gi|68446527|dbj|BAE04111.1| 50S ribosomal protein L3 [Staphylococcus haemolyticus JCSC1435]
          Length = 220

 Score =  148 bits (373), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 92/219 (42%), Positives = 121/219 (55%), Gaps = 11/219 (5%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+QVG        
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKKAYK 60

Query: 53  AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
                 K  +KP  G       +PK+ + EFR   + D   VG   +   F  G ++DVT
Sbjct: 61  KDAKSNKYANKPAEGHAKKAGAAPKRFIREFR-NVNVDEYEVGQEVTVDTFEAGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G + GKGF GA+KRH        HG S  HR+ GS G   D  RVFK +KM GRMGGN V
Sbjct: 120 GTSKGKGFQGAIKRHGQARGPMAHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           TV+NLEVV VD +  +ILVKG VPG KK  ++ ++ S K
Sbjct: 179 TVQNLEVVQVDTENNVILVKGNVPGPKK-GFVEIQTSIK 216


>gi|322390660|ref|ZP_08064174.1| 50S ribosomal protein L3 [Streptococcus parasanguinis ATCC 903]
 gi|321142633|gb|EFX38097.1| 50S ribosomal protein L3 [Streptococcus parasanguinis ATCC 903]
          Length = 208

 Score =  148 bits (373), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 128/212 (60%), Gaps = 6/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY A+QVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG   +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNVEGLEVGDEITVDTFEAGDIVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFK K +AGRMGG+RVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ +IL+KG VPGAKK S I ++ + K+
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKA 206


>gi|308272979|emb|CBX29583.1| 50S ribosomal protein L3 [uncultured Desulfobacterium sp.]
          Length = 211

 Score =  148 bits (373), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 121/199 (60%), Gaps = 2/199 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT +++ EG+ +PVTVL +  C V   ++ + +GY A+Q+G GE K   
Sbjct: 1   MCRGLIGKKLGMTVMFSSEGKCVPVTVLKVGPCVVTQIKSNETDGYNALQIGFGEKKKTR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP++G      +   + + EF V+  ++   +G + +   F VG LVDV+G+  G+GF
Sbjct: 61  INKPVQGHLKKGGLESCEYMREFSVENPEE-YKLGQILNIEMFNVGDLVDVSGIIKGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG +KRH F G R THG S  HR  GS G    P RVFK KK+ G  G  + T++NLE++
Sbjct: 120 SGVIKRHGFSGGRKTHG-SHCHRIPGSIGASAWPSRVFKGKKLPGHYGCCKQTMRNLEII 178

Query: 181 SVDDKRGLILVKGCVPGAK 199
            V     LIL+KG VPG +
Sbjct: 179 DVRQHDNLILLKGAVPGPR 197


>gi|228470688|ref|ZP_04055539.1| 50S ribosomal protein L3 [Porphyromonas uenonis 60-3]
 gi|228307545|gb|EEK16541.1| 50S ribosomal protein L3 [Porphyromonas uenonis 60-3]
          Length = 205

 Score =  148 bits (373), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 81/197 (41%), Positives = 122/197 (61%), Gaps = 3/197 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EG  +P TV+ +  C V   +T D++GY A+Q+G  +AK K+ ++
Sbjct: 3   GLLGKKIGMTSVFSAEGVNVPCTVIEVGPCVVTQVKTADRDGYEAIQLGFQDAKDKHTTR 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F +  V+ K+ L EF     D  L  G   +   F     VDV G + GKGF G 
Sbjct: 63  PLQGHFKAAGVTNKRHLAEFMGFGSDYKL--GDEITVELFNDTHYVDVHGTSKGKGFQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ ++THG     R+ G+ G    P +VFK  +MAG+MG  RVTV+NLEV+ V
Sbjct: 121 VKRHGFGGVGQSTHGQDDRLRAPGAVGACSYPAKVFKGTRMAGQMGNKRVTVQNLEVIKV 180

Query: 183 DDKRGLILVKGCVPGAK 199
             +  ++++KG VPGAK
Sbjct: 181 MPEHNILVLKGSVPGAK 197


>gi|298373698|ref|ZP_06983687.1| 50S ribosomal protein L3 [Bacteroidetes oral taxon 274 str. F0058]
 gi|298274750|gb|EFI16302.1| 50S ribosomal protein L3 [Bacteroidetes oral taxon 274 str. F0058]
          Length = 206

 Score =  148 bits (373), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 81/205 (39%), Positives = 125/205 (60%), Gaps = 3/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+  P TV+ +  C V   +T++K+GY A Q+G  E K K+ +K
Sbjct: 3   GLIGKKVGMTSVFSADGKNTPCTVIEVGPCVVTQVKTVEKDGYQAYQLGFEEKKEKHTNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
              G F    VS ++ L EF+   D +L    +V + + F     VDV G++ GKGF G 
Sbjct: 63  AEAGHFKKAGVSARRNLVEFK-SFDKELKAGDTVTADAVFEENDFVDVVGISKGKGFQGV 121

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ + THG     R+ GS G    P +V K  +MAGR GG+RVT++NL+VV +
Sbjct: 122 VKRHGFGGVGQQTHGQHNRGRAPGSMGASSYPSKVVKGMRMAGRTGGDRVTIQNLQVVKI 181

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  +++VKG +PGA K S +L+ 
Sbjct: 182 IPEHNIVMVKGSIPGA-KGSIVLIE 205


>gi|21674998|ref|NP_663063.1| 50S ribosomal protein L3 [Chlorobium tepidum TLS]
 gi|42559650|sp|Q8KAH2|RL3_CHLTE RecName: Full=50S ribosomal protein L3
 gi|21648231|gb|AAM73405.1| ribosomal protein L3 [Chlorobium tepidum TLS]
          Length = 209

 Score =  148 bits (373), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 86/207 (41%), Positives = 117/207 (56%), Gaps = 1/207 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT +YN +   +P TV+    C V   ++ +K+GY A Q+G GE   K VSKP
Sbjct: 4   ILGKKIGMTRLYNDKREAVPCTVIQAGPCYVTQVKSTEKDGYEAYQLGFGERDEKKVSKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + G +     +P   L E         L  G+      F  G  V+V G+T GKGF+G +
Sbjct: 64  LAGHYKKAGKNPGYILSEVSKSLIVGELEAGATVPVDVFKEGDKVNVLGVTKGKGFAGVV 123

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHNFGG   THG S   R+ GS G   DP R FK  +MAGRMGG   TV+NL +V V  
Sbjct: 124 KRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFKGTRMAGRMGGKNKTVQNLVIVKVMP 183

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
           +  LI+VKG VPG  KNS++ +  + K
Sbjct: 184 ESNLIVVKGAVPGP-KNSYVKIVSTTK 209


>gi|293115547|ref|ZP_05792032.2| 50S ribosomal protein L3 [Butyrivibrio crossotus DSM 2876]
 gi|292809408|gb|EFF68613.1| 50S ribosomal protein L3 [Butyrivibrio crossotus DSM 2876]
          Length = 240

 Score =  147 bits (372), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 91/228 (39%), Positives = 124/228 (54%), Gaps = 19/228 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52
           M+  ++A K+GMT ++N +G  +PVTVL    C V   +T++ +GY AVQVG        
Sbjct: 14  MKKAILATKIGMTQIFNEDGVLVPVTVLQAGPCVVTQVKTVENDGYAAVQVGFVDKKEKI 73

Query: 53  -----AGEAKVKN---VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
                 G  +++N   V+K  +G F    VS K+ + EFR +   D   V        F 
Sbjct: 74  VNVDKNGSKEIRNRHGVTKAEKGHFDKAGVSYKRYVREFRFENAADYT-VADEIKADIFA 132

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  +D T +  GKGF GA+KRH        HG S  HR  GS G   DP RVFK K M 
Sbjct: 133 AGDKLDATAIAKGKGFQGAIKRHGQHRGPMAHG-SKFHRHQGSNGSSSDPSRVFKGKGMP 191

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           G MG  ++TV+NLE+V VD +  LILVKG VPG KK S + ++++ KS
Sbjct: 192 GHMGAKKITVQNLEIVKVDVENNLILVKGAVPGPKK-SLVTLKETVKS 238


>gi|167463902|ref|ZP_02328991.1| Ribosomal protein L3 [Paenibacillus larvae subsp. larvae
           BRL-230010]
 gi|322381126|ref|ZP_08055129.1| 50S ribosomal protein L3-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321154702|gb|EFX46973.1| 50S ribosomal protein L3-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 208

 Score =  147 bits (372), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 122/212 (57%), Gaps = 6/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT V+  EG  +PVTV+    C V+  +  + +GY A+QVG  + K K 
Sbjct: 1   MTKGILGKKLGMTQVFTPEGLVVPVTVIQAGPCVVLQKKDSENDGYEAIQVGFEDKKEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFR-VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            +KP  G     N +PK+ + EFR VQ  D    VG       F  G+ VDVTG + GKG
Sbjct: 61  ANKPEIGHAKKANTTPKRYVQEFRGVQLSD--YEVGQELKADLFAEGEFVDVTGTSKGKG 118

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KRHN      +HG S  HR  GS G      RVFK K + G MG   VT++NL+V
Sbjct: 119 FQGVIKRHNQSRGPMSHG-SRYHRGPGSMGSIA-ANRVFKGKNLPGHMGHETVTLQNLQV 176

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           + VD +R +ILVKG +PG  KNS++ V+ + K
Sbjct: 177 IKVDAERNVILVKGSIPGP-KNSYVKVQSAVK 207


>gi|172056140|ref|YP_001812600.1| 50S ribosomal protein L3 [Exiguobacterium sibiricum 255-15]
 gi|226725176|sp|B1YGV0|RL3_EXIS2 RecName: Full=50S ribosomal protein L3
 gi|171988661|gb|ACB59583.1| ribosomal protein L3 [Exiguobacterium sibiricum 255-15]
          Length = 208

 Score =  147 bits (372), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 91/211 (43%), Positives = 131/211 (62%), Gaps = 5/211 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT ++N  G  +PVTV+ ++   V+  +T++ +GY AVQ+G G+ K   
Sbjct: 1   MAKGILGTKLGMTQIFNESGEVVPVTVVSVEGNVVLQLKTMEVDGYEAVQLGFGDIKEGR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  + +PK+ + E R    D    +G       F  G++VDVTG + GKGF
Sbjct: 61  QNKPQKGHAAKASATPKRFIKEIRTSVTD--FEIGQEIKADTFAAGEMVDVTGTSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GA+KRHN       HG S  HR  GS G    P RVFK K + GRMGG +VTV+NLE+V
Sbjct: 119 AGAIKRHNQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGEQVTVQNLEIV 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +RGL+LVKG +PGA+K S ++V+ + K
Sbjct: 177 KVDVERGLLLVKGAIPGARK-SQVVVKTAVK 206


>gi|269991357|emb|CAX12541.1| 50S ribosomal protein L3 [Fucus vesiculosus]
          Length = 209

 Score =  147 bits (372), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 2/201 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+   K+GMT +++ EG  +PVTV+ +  C +   +T   NGY AVQ+G  + +V  
Sbjct: 1   MSIGIFGNKIGMTQIFDKEGLALPVTVIRVGPCFITQLKTEQLNGYSAVQIGYLKRQVLK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++K   G  +   + P   L E++V  D     +G V +  YF +GQ V+V+G +IGKGF
Sbjct: 61  LNKAELGHLTKNGLLPLLYLREYKV-PDPTNYSLGQVINVDYFQIGQFVNVSGKSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRHNF     THG S +H++ GS G    PGRVF  K+MAG++G  +VT+  LE++
Sbjct: 120 SGNQKRHNFKRGPMTHG-SKNHKAPGSIGPGTTPGRVFPGKRMAGQLGAKKVTISKLEIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKN 201
            +D K  L+++KG VPG   N
Sbjct: 179 GIDSKHSLLILKGSVPGKSGN 199


>gi|220928207|ref|YP_002505116.1| 50S ribosomal protein L3 [Clostridium cellulolyticum H10]
 gi|254803665|sp|B8I7X9|RL3_CLOCE RecName: Full=50S ribosomal protein L3
 gi|219998535|gb|ACL75136.1| ribosomal protein L3 [Clostridium cellulolyticum H10]
          Length = 212

 Score =  147 bits (372), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 129/214 (60%), Gaps = 4/214 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT +++  G  IPVTV+      VV  +T++ +GY A++VG  +   K 
Sbjct: 1   MKKAMLGKKIGMTQIFDENGLVIPVTVVEAGPLTVVQKKTVETDGYDAIKVGYVKVAEKK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG-SVFSPSYFTVGQLVDVTGMTIGKG 119
           +SKP  G FS   ++P K L EFR++ D     VG  + + + F  G  +DV+G++ GKG
Sbjct: 61  LSKPNLGQFSKTKLAPMKHLKEFRLE-DISGFEVGQEIKAENMFQSGDKIDVSGVSKGKG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G  KR+       THG S+ HR  GS G   +PGRVFK KK+ G MG   +TV+NLEV
Sbjct: 120 FQGVTKRYGQRTGPNTHG-SMYHRRIGSMGSGTNPGRVFKGKKLPGHMGRETITVQNLEV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V VD  R LIL+KG +PG  K   ++++++ KS 
Sbjct: 179 VRVDSDRNLILIKGAIPGP-KGGLLVIKNTVKSG 211


>gi|302337477|ref|YP_003802683.1| 50S ribosomal protein L3 [Spirochaeta smaragdinae DSM 11293]
 gi|301634662|gb|ADK80089.1| 50S ribosomal protein L3 [Spirochaeta smaragdinae DSM 11293]
          Length = 206

 Score =  147 bits (372), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 84/194 (43%), Positives = 116/194 (59%), Gaps = 4/194 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT +++  G   PVTV+ +++  V+  R  +KNGY A  +GA + K K+V+K
Sbjct: 3   GLIGKKVGMTQIFDERGVLTPVTVIKIEDNVVIDKRDEEKNGYTASVIGAEDLKSKHVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F   NV PK+ L E R  + +    VG       F     VDV G + GKG+ GA
Sbjct: 63  PYGGQFPE-NVHPKRYLVEMRDFEAES--SVGETLGVGIFKEISFVDVVGTSKGKGYQGA 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G RATHG S  HR  G TG    P +V K  KM GRMG  R TV+NL V+ VD
Sbjct: 120 MKRHGFKGGRATHG-SKFHRGLGGTGMAATPSKVLKGAKMPGRMGAARTTVQNLRVIKVD 178

Query: 184 DKRGLILVKGCVPG 197
           +++ +++VKG +PG
Sbjct: 179 EEKQVLMVKGAIPG 192


>gi|325299132|ref|YP_004259049.1| 50S ribosomal protein L3 [Bacteroides salanitronis DSM 18170]
 gi|324318685|gb|ADY36576.1| 50S ribosomal protein L3 [Bacteroides salanitronis DSM 18170]
          Length = 205

 Score =  147 bits (372), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 80/205 (39%), Positives = 123/205 (60%), Gaps = 3/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   ++++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQLGFQDMKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PK+ L EF+   ++  L +G   +   F     VDV G + GKG+ G 
Sbjct: 63  PLMGHFKKAGVTPKRHLAEFKDFSEE--LNLGDTITVELFNDAPYVDVIGTSKGKGYQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ + THG     R  GS G    P +VFK  +MAG MG +RVT  NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMAGHMGCDRVTTHNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  L+L+KG VPG K +  I+ +
Sbjct: 181 IPEHNLLLIKGSVPGYKGSIVIIEK 205


>gi|311748514|ref|ZP_07722299.1| 50S ribosomal protein L3 [Algoriphagus sp. PR1]
 gi|126577030|gb|EAZ81278.1| 50S ribosomal protein L3 [Algoriphagus sp. PR1]
          Length = 210

 Score =  147 bits (372), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 83/209 (39%), Positives = 123/209 (58%), Gaps = 5/209 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++ +GR +  T++    C V   + ++ +GY AVQ+  GE K KN  
Sbjct: 2   SGIIGKKVGMTSIFSADGRNVACTLIEAGPCVVTQVKNVETDGYNAVQLAYGERKEKNTP 61

Query: 63  KPMRGFFSSVNVSPKKKLF---EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           KP+ G F     +PK+K+    EFRV+ +  +    +V S   F  G  VD  G + GKG
Sbjct: 62  KPLIGHFKKAGTTPKQKVVEFREFRVEFEGQVDLGATVKSSEVFVEGDFVDAIGTSKGKG 121

Query: 120 FSGAMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           F G +KRH F G+  +THG     R  GS G    P RVFK  +MAGR GG+RV V NL+
Sbjct: 122 FQGVVKRHGFAGVGGSTHGQHNRQRHPGSIGACSWPSRVFKGMRMAGRTGGDRVKVINLK 181

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVR 207
           V+ +  ++ L+LV G VPG  KNS++++ 
Sbjct: 182 VLKIYPEQNLLLVSGSVPGP-KNSFVILE 209


>gi|154498883|ref|ZP_02037261.1| hypothetical protein BACCAP_02875 [Bacteroides capillosus ATCC
           29799]
 gi|150271723|gb|EDM98949.1| hypothetical protein BACCAP_02875 [Bacteroides capillosus ATCC
           29799]
          Length = 240

 Score =  147 bits (372), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 79/199 (39%), Positives = 115/199 (57%), Gaps = 1/199 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ +K+GMT +++  G+ IPVTV+    C V   +T++K+GY AVQ+G  +   + 
Sbjct: 1   MEKAIIGKKVGMTQIFDEAGKVIPVTVIEAGPCVVTQKKTVEKDGYTAVQLGFEDVPERK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP  G      VS K+ L EF +  + + L +G       F  G  VDVTG++ GKG+
Sbjct: 61  LTKPELGHLKKAGVSAKRVLKEFALN-NAESLNIGDEVKADAFAAGDRVDVTGISKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH    L+ +HG    HR  GS     DP R+FK K  AG+MG  +VTV NL+VV
Sbjct: 120 AGVIKRHGAHRLKESHGTGPVHRHAGSMSANSDPSRIFKGKIGAGQMGNEQVTVLNLDVV 179

Query: 181 SVDDKRGLILVKGCVPGAK 199
            VD +  LI V G +PG K
Sbjct: 180 KVDPELNLIAVCGAIPGPK 198


>gi|260905721|ref|ZP_05914043.1| 50S ribosomal protein L3 [Brevibacterium linens BL2]
          Length = 224

 Score =  147 bits (372), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 117/209 (55%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++ +   +PVTV+   +  V   R  + +GY AVQ+  GE   + V+K
Sbjct: 17  GLLGTKLGMTQVWDEQNNLVPVTVVAAGSNVVTQVRNEETDGYPAVQIAFGEIDPRKVNK 76

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ L E R     D   +G       F  G  VDVT  T GKG +G 
Sbjct: 77  PTAGHFEKAGVTPRRHLVELRTADAADY-SLGQELGVDTFDAGIKVDVTAKTKGKGTAGV 135

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G+ A+HG   +HR  GS G    PGRVFK  +MAGRMG  + T +NL + +VD
Sbjct: 136 MKRHGFHGVGASHGQHRNHRKPGSIGGAATPGRVFKGMRMAGRMGAVKHTTQNLTIHAVD 195

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +   +L+KG VPG  K + +LVR + K 
Sbjct: 196 TENNFLLIKGAVPG-PKGAVVLVRSAAKE 223


>gi|154483187|ref|ZP_02025635.1| hypothetical protein EUBVEN_00888 [Eubacterium ventriosum ATCC
           27560]
 gi|149735995|gb|EDM51881.1| hypothetical protein EUBVEN_00888 [Eubacterium ventriosum ATCC
           27560]
          Length = 198

 Score =  147 bits (372), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 86/201 (42%), Positives = 117/201 (58%), Gaps = 5/201 (2%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT ++N  G  +PVTVL    C V   +T++ +GY AVQVG  + + K V+KP++G F  
Sbjct: 1   MTQIFNEAGELVPVTVLQAGPCVVTQVKTIENDGYEAVQVGFEDIREKLVNKPVKGMFDK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             VS K+ + EF+++ +     V        F  G  +D T +  GKGF GA+KRH    
Sbjct: 61  AGVSYKRYVREFKLEGE---YSVKDEIKVDVFEAGDKIDATAIAKGKGFQGAIKRHGQSR 117

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
               HG S  HR  GS G    P RVFK KKM G MGG +VT +NLEVV VD ++ L+LV
Sbjct: 118 GPMAHG-SKYHRHAGSNGSCSTPSRVFKGKKMPGHMGGKKVTTQNLEVVRVDAEKNLLLV 176

Query: 192 KGCVPGAKKNSWILVRDSFKS 212
           KG VPG KK S + +++S K+
Sbjct: 177 KGAVPGPKK-SLVTIKESVKA 196


>gi|132952|sp|P28600|RL3_BACST RecName: Full=50S ribosomal protein L3
 gi|40102|emb|CAA47402.1| ribosomal protein L3 [Geobacillus stearothermophilus]
          Length = 213

 Score =  147 bits (372), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 84/200 (42%), Positives = 119/200 (59%), Gaps = 3/200 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++   G  IPVTV+H     V+  +T++ +GY A+Q+G  +   K 
Sbjct: 1   MTKGILGRKIGMTQIFAENGDLIPVTVIHATPNVVLQKKTIENDGYEAIQLGFEDISEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP  G  +  N +PK+ + E R    ++   VG       F+ G +VDVTG++ GKGF
Sbjct: 61  ANKPQIGHAAKANTAPKRFIREIRGANINEY-EVGQEVKVDIFSEGDIVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    P RVFK K + GRMGG RVT++NL++V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGAIA-PNRVFKTKNLPGRMGGERVTIQNLKIV 177

Query: 181 SVDDKRGLILVKGCVPGAKK 200
            VD +R L+L+KG VPG +K
Sbjct: 178 KVDPERNLLLIKGNVPGPRK 197


>gi|313887083|ref|ZP_07820782.1| 50S ribosomal protein L3 [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312923494|gb|EFR34304.1| 50S ribosomal protein L3 [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|332176633|gb|AEE12323.1| 50S ribosomal protein L3 [Porphyromonas asaccharolytica DSM 20707]
          Length = 205

 Score =  147 bits (372), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 81/197 (41%), Positives = 122/197 (61%), Gaps = 3/197 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EG  +P TV+ +  C V   +T D++GY A+Q+G  +AK K+ ++
Sbjct: 3   GLLGKKIGMTSVFSAEGVNVPCTVIEVGPCVVTQVKTADRDGYEAIQLGFQDAKDKHTTR 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F +  V+ K+ L EF     D  L  G   +   F     VDV G + GKGF G 
Sbjct: 63  PLQGHFKAAGVTNKRHLAEFMGFGSDYKL--GDEITVELFNDTHYVDVHGTSKGKGFQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ ++THG     R+ GS G    P +VFK  +MAG++G  RVTV+NLEV+ V
Sbjct: 121 VKRHGFGGVGQSTHGQDDRLRAPGSVGACSYPAKVFKGTRMAGQLGNKRVTVQNLEVIKV 180

Query: 183 DDKRGLILVKGCVPGAK 199
             +  ++++KG VPGAK
Sbjct: 181 MPEHNILVLKGSVPGAK 197


>gi|166031659|ref|ZP_02234488.1| hypothetical protein DORFOR_01359 [Dorea formicigenerans ATCC
           27755]
 gi|166028636|gb|EDR47393.1| hypothetical protein DORFOR_01359 [Dorea formicigenerans ATCC
           27755]
          Length = 226

 Score =  147 bits (372), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 88/228 (38%), Positives = 125/228 (54%), Gaps = 19/228 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G   PVTVL    C V   +T++ +GY AVQVG  + K K 
Sbjct: 1   MKKAILATKVGMTQIFNEDGTLTPVTVLQAGPCVVTQIKTVENDGYEAVQVGFVDKKDKT 60

Query: 61  V----------------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
           V                +K  +G F+   V+ K+ + EF+ +   D   +        F 
Sbjct: 61  VNKDKNGKKEIVHRHGVTKAEQGHFAKAGVTGKRFVKEFKFENAADY-ALAQEIKADIFE 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  +D T ++ GKGF GA+KRHN       HG S  HR  GS G   DP +VFK KKM 
Sbjct: 120 AGDKIDATAISKGKGFQGAIKRHNQHRGPMAHG-SKFHRHQGSNGAASDPSKVFKGKKMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           G MG  ++T++NLEVV VD +  L+LVKG VPG KK S + +R++ K+
Sbjct: 179 GHMGSKKITIQNLEVVRVDAENNLLLVKGSVPGPKK-SLVTIREAVKA 225


>gi|160894756|ref|ZP_02075531.1| hypothetical protein CLOL250_02307 [Clostridium sp. L2-50]
 gi|156863690|gb|EDO57121.1| hypothetical protein CLOL250_02307 [Clostridium sp. L2-50]
          Length = 227

 Score =  147 bits (372), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 92/228 (40%), Positives = 126/228 (55%), Gaps = 19/228 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--- 57
           M+  ++A K+GMT +++  G  +PVTVL    C V   +T++ +GY A+QVG GE K   
Sbjct: 1   MKKAILATKVGMTQIFDENGVLVPVTVLQAGPCVVTQVKTVENDGYDAIQVGFGEKKERI 60

Query: 58  -VKNVS------------KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
             K+VS            K   G     N +PK    EFR+  D     +G+      F 
Sbjct: 61  TTKDVSGKKVIRNPHGAGKAEVGHAKKANTTPKTFYREFRLD-DCAQYELGAEIKADVFA 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  +DVT  T GKG++G +KRH      + HG S  HR  GS G    PGRVFK KKM 
Sbjct: 120 EGDKIDVTAKTKGKGYAGGLKRHGLKSGPSGHG-SKYHRHAGSNGSATTPGRVFKGKKMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           G MG  RVT++NLEVV +D +  +ILVKG VPG KK S ++++D+ K+
Sbjct: 179 GHMGSVRVTIQNLEVVKIDVENDVILVKGAVPGPKK-SLVMIKDTVKT 225


>gi|116515259|ref|YP_802888.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|122285345|sp|Q057A4|RL3_BUCCC RecName: Full=50S ribosomal protein L3
 gi|58384692|gb|AAW72707.1| 50S ribosomal protein L3 [Buchnera aphidicola (Cinara cedri)]
 gi|116257113|gb|ABJ90795.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 208

 Score =  147 bits (372), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 85/208 (40%), Positives = 127/208 (61%), Gaps = 2/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +KLGMT ++  E   IPVT + + +  VV  +T++ + Y ++Q+  G  K K V K
Sbjct: 3   GLVGKKLGMTRIFFEEYTSIPVTAIEILDNIVVQVKTIENDNYESIQLTTGFKKEKKVLK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
              G F   NVS  + L+EF+  K+      G   + ++F   + +D+TG++ GKGF+G 
Sbjct: 63  SEYGHFLKFNVSVGRGLWEFKC-KNSSNYSSGQKITINFFKNIKKLDITGISKGKGFAGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    ATHG S+SHR  GS G  Q PG VFK KKM+G +G  R T++NL++V +D
Sbjct: 122 VKRWNFRMQDATHGNSLSHRVPGSIGQNQTPGHVFKGKKMSGHLGDQRTTIQNLKIVKID 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D   +IL+KG +PG+   S IL++ S K
Sbjct: 182 DINKIILIKGSIPGS-IGSDILLKPSIK 208


>gi|299820955|ref|ZP_07052844.1| 50S ribosomal protein L3 [Listeria grayi DSM 20601]
 gi|299817976|gb|EFI85211.1| 50S ribosomal protein L3 [Listeria grayi DSM 20601]
          Length = 209

 Score =  147 bits (371), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 88/212 (41%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T+D +GY AVQ+G    + K 
Sbjct: 1   MTKGILGRKVGMTQVFTENGELIPVTVIEAAENVVLQKKTVDTDGYEAVQIGFENKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G     N +PK+ + E R   + D   +G+      F  G +VD TG++ GKGF
Sbjct: 61  SNKPEKGHVVKANTTPKRFIREIR-DVNLDEYEIGAEVKVDVFAEGDIVDATGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK + GRMGG +VT++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQVTIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  + ++LVKG VPGAKK S + ++ + K+
Sbjct: 178 KVDVDKNILLVKGNVPGAKK-SLVQIKTAVKA 208


>gi|16801842|ref|NP_472110.1| 50S ribosomal protein L3 [Listeria innocua Clip11262]
 gi|116873998|ref|YP_850779.1| 50S ribosomal protein L3 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|42559673|sp|Q927K7|RL3_LISIN RecName: Full=50S ribosomal protein L3
 gi|123466648|sp|A0ALW8|RL3_LISW6 RecName: Full=50S ribosomal protein L3
 gi|16415317|emb|CAC98007.1| ribosomal protein L3 [Listeria innocua Clip11262]
 gi|116742876|emb|CAK22000.1| ribosomal protein L3 [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 209

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/212 (39%), Positives = 128/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY AVQ+G  + + K 
Sbjct: 1   MTKGILGRKVGMTQVFTENGELIPVTVIEAAQNVVLQKKTVETDGYEAVQIGFEDKRAKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  + +PK+ + EFR   + D   +G+      F  G ++D TG++ GKGF
Sbjct: 61  SNKPEQGHVAKADTTPKRFIREFR-DVNLDEYEIGAEVKVDVFAEGDIIDATGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK + GRMGG ++T++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQITIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD ++ ++LVKG VPGAKK + + ++ + K+
Sbjct: 178 KVDVEKNVLLVKGNVPGAKK-ALVQIKTATKA 208


>gi|86132544|ref|ZP_01051137.1| 50S ribosomal protein L3 [Dokdonia donghaensis MED134]
 gi|85816786|gb|EAQ37971.1| 50S ribosomal protein L3 [Dokdonia donghaensis MED134]
          Length = 203

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 80/206 (38%), Positives = 126/206 (61%), Gaps = 6/206 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C +   RT + +GY A+Q+G  +  VK  +
Sbjct: 2   SGLIGKKVGMTSIFDENGKNIPCTVIEAGPCVITQVRTKETDGYEALQLGFDD--VKKAN 59

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G         K+K+ EF  Q  +    +G   +  +F  G+ VDV+G + GKGF G
Sbjct: 60  KAATGHAKKAGTVAKRKVVEF--QGFEGEFKLGDAITVDHFAEGEFVDVSGTSKGKGFQG 117

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH F G+ +ATHG     R+ GS G    P RVFK  +MAGRMGG+++ V+NL+V+ 
Sbjct: 118 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGDKIKVQNLKVLK 177

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L++VKGCVPG  KN++++++
Sbjct: 178 VVAEKNLLVVKGCVPG-HKNAYVIIQ 202


>gi|226329480|ref|ZP_03804998.1| hypothetical protein PROPEN_03389 [Proteus penneri ATCC 35198]
 gi|225202666|gb|EEG85020.1| hypothetical protein PROPEN_03389 [Proteus penneri ATCC 35198]
          Length = 181

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/176 (47%), Positives = 109/176 (61%), Gaps = 1/176 (0%)

Query: 30  LDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD 89
           + N +V   R L+K+GY A+QV  G  K   V KP  G F+   V   + L EFR+ + +
Sbjct: 1   MKNNRVTQVRDLEKDGYRAIQVTTGSKKANRVLKPEAGHFAKAGVEAGRLLREFRLNEGE 60

Query: 90  DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTG 149
           +   VG   S   F   + VDVTG + GKGF+G +KR NF    ATHG S+SHR  GS G
Sbjct: 61  EYT-VGQSISVEIFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIG 119

Query: 150 CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWIL 205
             Q PG+VFK KKMAG++G  +VTV++LEVV VD +R L+LVKG VPGA  +  I+
Sbjct: 120 QNQTPGKVFKGKKMAGQLGNEQVTVQSLEVVRVDAERNLLLVKGAVPGATGSDLIV 175


>gi|330850884|ref|YP_004376634.1| 50S ribosomal protein L3 [Fistulifera sp. JPCC DA0580]
 gi|328835704|dbj|BAK19000.1| 50S ribosomal protein L3 [Fistulifera sp. JPCC DA0580]
          Length = 207

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/206 (37%), Positives = 124/206 (60%), Gaps = 2/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT +++  G  IPVT+L +  C V   +T  K+GY ++QVG G    K 
Sbjct: 1   MSVGLLGNKIGMTQIFDESGNIIPVTILKVGPCVVTQVKTKSKDGYDSIQVGYGNVSPKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G     ++ P + L EFRV ++++   +G +   + F+ GQL+++ G +IGKGF
Sbjct: 61  LTQPELGHLQKSDIQPLRYLKEFRVSEENE-FNLGQILDVNSFSPGQLINIQGKSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KR+NF     THG S +HR+ GS G    PGRV   KKM+G++G    T+K L+V+
Sbjct: 120 SGLQKRYNFSRGPMTHG-SKNHRAPGSIGMGTSPGRVLPGKKMSGQVGNKVTTIKKLKVI 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
            V+ +  ++++KG VPG   N   +V
Sbjct: 179 QVNLEENILVIKGSVPGKPGNLLSIV 204


>gi|189218695|ref|YP_001939336.1| Ribosomal protein L3 [Methylacidiphilum infernorum V4]
 gi|189185553|gb|ACD82738.1| Ribosomal protein L3 [Methylacidiphilum infernorum V4]
          Length = 221

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/211 (39%), Positives = 129/211 (61%), Gaps = 3/211 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ARK+GMT +++  G   P+TVL  +   VV  +   +   + +QVG      + +SK
Sbjct: 14  GIMARKIGMTQLFDATGTMHPLTVLVAEPNVVVQCKKEGEGKEVRLQVGYEALPERKLSK 73

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G +    +SP++ L EF  + ++   P G +   S F  G+ VDV G+T GKGF G 
Sbjct: 74  PLLGHYKKSGISPRRHLKEFVFESEESWQP-GQLLDVSRFNEGEKVDVIGITKGKGFQGV 132

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +K+H FGG  A+HG S +HR +G+ G R  PGRVFKN+ M G MG  +VT++NL++  + 
Sbjct: 133 IKKHGFGGQPASHG-SKTHRRNGAIGERSFPGRVFKNQGMPGHMGRKKVTIQNLDLFKII 191

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            +  ++LVKG VPGA K   ++VR + K++V
Sbjct: 192 PEDNVLLVKGSVPGA-KGDMVIVRKAIKASV 221


>gi|330997365|ref|ZP_08321216.1| 50S ribosomal protein L3 [Paraprevotella xylaniphila YIT 11841]
 gi|329570739|gb|EGG52455.1| 50S ribosomal protein L3 [Paraprevotella xylaniphila YIT 11841]
          Length = 205

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 81/205 (39%), Positives = 121/205 (59%), Gaps = 3/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   ++++K+GY AVQ+G  EAK KN + 
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQLGFQEAKEKNTTA 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F     +PK+ L EF   + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGTTPKRHLAEFTGFEQE--LNLGDTVTVDMFEGTVYVDVIGTSKGKGFQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ + THG     R  GS G    P +VFK  +M G+MG  RVT +NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGLRMGGQMGNERVTAQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  L+L+KG VPG K +  I+ +
Sbjct: 181 IPEHNLLLIKGSVPGYKGSIVIIEK 205


>gi|289449936|ref|YP_003475784.1| 50S ribosomal protein L3 [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289184483|gb|ADC90908.1| 50S ribosomal protein L3 [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 211

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/212 (40%), Positives = 127/212 (59%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ RK GMT +++  G  +PVTV+     QVV  +T++ +GY AV+VG  + K   
Sbjct: 1   MEKFMLGRKAGMTQLFDENGVAVPVTVIECGPVQVVQKKTVEVDGYSAVKVGFADKKETA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP  G F    +SPK+ L EF V ++++      +    +F VG  VDV+G++ GKG+
Sbjct: 61  VNKPDLGQFKKAGISPKRFLKEFVVAENNEFAAGQELKVSDFFAVGDRVDVSGVSKGKGY 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH   G    HG S  HR  GS G    PGRVFK KKM G+MG   VTV+NL+VV
Sbjct: 121 QGNVKRHGQKGGPQAHG-SKYHRRVGSMGPNTWPGRVFKGKKMPGQMGNVNVTVQNLDVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R +I +KG VPG  +  ++ ++++ K+
Sbjct: 180 LVDGERNIIALKGAVPGP-RGGYLSIKETVKA 210


>gi|259047555|ref|ZP_05737956.1| 50S ribosomal protein L3 [Granulicatella adiacens ATCC 49175]
 gi|259035746|gb|EEW37001.1| 50S ribosomal protein L3 [Granulicatella adiacens ATCC 49175]
          Length = 210

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 127/212 (59%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT  +   G  IPVTV+ +    V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGKKVGMTQYFTEAGELIPVTVVEVTPNVVLQLKTIENDGYEAVQLGFDDLREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            ++P +G  +  N +PK+ + EF   +  +   VG   +   F  G +VDVTG + GKGF
Sbjct: 61  SNRPAKGHVAKANATPKRFIREFNNVELSEY-EVGQEITVDVFKAGDIVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    P RVFK K + G+MGG+R+T++NLEVV
Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGGASFPSRVFKGKALPGQMGGDRITIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R +IL+KG VPG+KK S + ++ + KS
Sbjct: 179 KVDAERNVILIKGNVPGSKK-SLVEIKTAIKS 209


>gi|124026708|ref|YP_001015823.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. NATL1A]
 gi|166233176|sp|A2C4Z9|RL3_PROM1 RecName: Full=50S ribosomal protein L3
 gi|123961776|gb|ABM76559.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. NATL1A]
          Length = 218

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 80/217 (36%), Positives = 130/217 (59%), Gaps = 3/217 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +GR +PVT++    C++   ++ D +GY AVQ+G    + K 
Sbjct: 1   MSLGILGKKLGMSQLFDDQGRAVPVTLIEAGPCRITQLKSADTDGYAAVQIGFQLIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G  +       + L E+RV+   +   +G+  +   F  GQ VDV+G T+G+GF
Sbjct: 61  INKPSKGHLAKSGNDLLRHLREYRVENSSEF-ELGASITVDDFEKGQKVDVSGDTMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     +HG S +HR  GS G    PGRV+  K+MAGRMGG +VT + LE++
Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHRLPGSIGAGTTPGRVYPGKRMAGRMGGKKVTTRALEIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
            +D    L++VKG VPG K  S + +R + +  V+ +
Sbjct: 179 KIDTNHNLLVVKGSVPG-KPGSLLNIRPAKRVGVSIQ 214


>gi|134298093|ref|YP_001111589.1| 50S ribosomal protein L3 [Desulfotomaculum reducens MI-1]
 gi|172044219|sp|A4J111|RL3_DESRM RecName: Full=50S ribosomal protein L3
 gi|134050793|gb|ABO48764.1| LSU ribosomal protein L3P [Desulfotomaculum reducens MI-1]
          Length = 209

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/211 (40%), Positives = 122/211 (57%), Gaps = 4/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++N  G  IPVTV+    C VV  RT + +GY A+Q+G G  +   
Sbjct: 1   MPKGILGKKIGMTQIFNEAGVAIPVTVVEAGPCLVVQKRTPENDGYSAIQLGFGVKRENL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G  +   V P + L E +V  D +   VG       F  G+ VDV G + GKGF
Sbjct: 61  LNKPTKGHLNKAGVRPVRFLRELKVD-DLEAFQVGQEIKADIFAEGEKVDVVGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNF      HG S  HR  GS+  +  P R FK +K+ G  G  RVTV+NL+VV
Sbjct: 120 AGGIKRHNFHRGPMAHG-SKYHRRPGSSAAK-GPARTFKGRKLPGHYGVERVTVQNLQVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L+ +KG VPG  +   +LV++S K
Sbjct: 178 KVDPERNLLAIKGAVPGP-RGGLLLVKNSVK 207


>gi|149072009|ref|YP_001293580.1| 50S ribosomal protein L3 [Rhodomonas salina]
 gi|212288242|sp|A6MW01|RK3_RHDSA RecName: Full=50S ribosomal protein L3, chloroplastic
 gi|134302960|gb|ABO70764.1| 50S ribosomal protein L3 [Rhodomonas salina]
          Length = 208

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/210 (39%), Positives = 122/210 (58%), Gaps = 2/210 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT +++  G  IPVTV+    C +   +T + + Y A+Q+G  E K  +
Sbjct: 1   MIPGILGTKLGMTQIFDESGLAIPVTVIKAGPCILTQIKTQESDSYQAIQIGFSEVKESS 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+ G          K L E+RV K  + L V    +   F VG+ V V+G TIGKGF
Sbjct: 61  LNKPLLGHLKKSQAPALKHLKEYRV-KSVEGLEVAQKITLDSFEVGKTVSVSGKTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G ++R++F     THG S +HR  GS G    PG+V K KKMAGR+GG + T+KNLE+V
Sbjct: 120 AGTVRRYSFTRGPMTHG-SKNHREPGSIGQGSTPGKVHKGKKMAGRLGGKQSTIKNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
            V+    +++VKG VPG K N   + ++  
Sbjct: 179 HVNTDNNILVVKGAVPGKKGNILSIQQEEI 208


>gi|226323010|ref|ZP_03798528.1| hypothetical protein COPCOM_00782 [Coprococcus comes ATCC 27758]
 gi|225208577|gb|EEG90931.1| hypothetical protein COPCOM_00782 [Coprococcus comes ATCC 27758]
          Length = 226

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 125/228 (54%), Gaps = 19/228 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK- 59
           M+  ++A K+GMT ++N +G   PVTVL    C V   +T++ +GY AVQVG  + K K 
Sbjct: 1   MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQIKTVENDGYSAVQVGFVDKKDKI 60

Query: 60  ---------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
                           V+K  +G F    V+ K+ + EF+ +  D+   +        F 
Sbjct: 61  VNVDKNGKKEIVHRHGVTKAEKGHFDKAGVTGKRFVKEFKFENADEY-QLAQEIKADIFE 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  VD T ++ GKGF GA+KRHN       HG S  HR  GS G   DP +VFK KKM 
Sbjct: 120 AGDKVDATAISKGKGFQGAIKRHNQHRGPMAHG-SKFHRHAGSNGAASDPSKVFKGKKMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           G MG  ++T++NLE+V VD +  L+LVKG VPG KK S + +++S KS
Sbjct: 179 GHMGAKKITIQNLEIVRVDVENNLLLVKGAVPGPKK-SLVTIKESVKS 225


>gi|182412051|ref|YP_001817117.1| ribosomal protein L3 [Opitutus terrae PB90-1]
 gi|177839265|gb|ACB73517.1| ribosomal protein L3 [Opitutus terrae PB90-1]
          Length = 216

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/212 (41%), Positives = 127/212 (59%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M S ++ +K+GMT VY+ +   +PVTV+    C VV  +T + +GY AVQ+G  + K KN
Sbjct: 1   MISSLLGKKIGMTQVYDAQNVLVPVTVVEAGPCAVVQVKTTETDGYNAVQIGFEQKKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKK-LFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            S   +   +  +++   + L E R++    L  VG V + + F  GQLVDV G+T GKG
Sbjct: 61  ASLAEKNHAAKASLADAPRVLSEVRLEAAPTL-KVGDVVNVTAFAEGQLVDVIGVTKGKG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR    G  A+HG S+ HR  GS G RQ PGR +KN+ M G MG  + TV+NL V
Sbjct: 120 FQGVVKRFRVAGGPASHG-SMFHRRIGSIGMRQTPGRTWKNQAMPGHMGQLKRTVQNLRV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V +  ++ LILVKG +PGA  +  ++VR + K
Sbjct: 179 VKIIPEKNLILVKGAIPGANGDD-VIVRSAIK 209


>gi|328953158|ref|YP_004370492.1| 50S ribosomal protein L3 [Desulfobacca acetoxidans DSM 11109]
 gi|328453482|gb|AEB09311.1| 50S ribosomal protein L3 [Desulfobacca acetoxidans DSM 11109]
          Length = 208

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/206 (41%), Positives = 125/206 (60%), Gaps = 4/206 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RKLGMT +++ EG  +PVTV+    C +V  ++L  +GY AVQVG    ++  ++KP
Sbjct: 5   LLGRKLGMTRIFSAEGVALPVTVIEAGPCYIVQKKSLAADGYDAVQVGFIRKRLDKLTKP 64

Query: 65  MRGFFSSVNV-SPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           ++G +      S  + L EFR++   DL  VG     S F +G+ VDV G + G+GF+G 
Sbjct: 65  LQGHYEKHGFKSGFRFLKEFRLESISDL-EVGQELDVSQFEIGERVDVVGFSKGRGFAGV 123

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR  F     THG S+SHR+ GS G    P RVFK KK+ GRMG  RVT   LEVV V 
Sbjct: 124 IKRWGFQRGPETHG-SMSHRAPGSIGASAYPSRVFKGKKLPGRMGNARVTTLTLEVVDVR 182

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDS 209
            +  L+++KG VPGA ++  +L++ S
Sbjct: 183 PESNLLILKGAVPGA-RHGLLLIKKS 207


>gi|91786167|ref|YP_547119.1| 50S ribosomal protein L3 [Polaromonas sp. JS666]
 gi|123165529|sp|Q12GX1|RL3_POLSJ RecName: Full=50S ribosomal protein L3
 gi|91695392|gb|ABE42221.1| LSU ribosomal protein L3P [Polaromonas sp. JS666]
          Length = 227

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/211 (41%), Positives = 126/211 (59%), Gaps = 3/211 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  +PVTV+ + N +V   +T   +GY A+QV  G  K   V+K
Sbjct: 8   GLLGRKVGMMRLFTDDGDTVPVTVVDVSNNRVTQVKTEANDGYDALQVAFGARKASRVTK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVF-SPSYFTVGQLVDVTGMTIGKGFS 121
           P  G  +   V   + L EFRV  D       G+V  +   F VGQLVDV G +IGKG++
Sbjct: 68  PAAGHLAKAGVEAGEILKEFRVTADVAGKYAAGTVVPAADVFAVGQLVDVQGTSIGKGYA 127

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHN    RA+HG S SH   GS G  QDPGRVF  K+M G +G   VT +NL +V 
Sbjct: 128 GTIKRHNMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTVTTQNLNIVR 187

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +D+ R L++++G VPG+ K  ++ VR + K+
Sbjct: 188 IDEARQLLMIRGAVPGS-KGGFVTVRAAIKA 217


>gi|229829429|ref|ZP_04455498.1| hypothetical protein GCWU000342_01519 [Shuttleworthia satelles DSM
           14600]
 gi|229791860|gb|EEP27974.1| hypothetical protein GCWU000342_01519 [Shuttleworthia satelles DSM
           14600]
          Length = 227

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/230 (40%), Positives = 128/230 (55%), Gaps = 23/230 (10%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52
           M   ++A K+GMT ++N +G  IPVTVL    C V   +TL+ +GY AVQVG        
Sbjct: 1   MNKAILATKVGMTQIFNEDGVLIPVTVLQAGPCAVTQVKTLENDGYEAVQVGFVDKKDKI 60

Query: 53  -----AGEAKVKN---VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
                AG  +V +   V+KP++G F+   V  KK + EFR +   +   +G       F 
Sbjct: 61  NTKDAAGRKEVHHRHGVNKPLKGHFAKAGVEGKKYVREFRFENASEY-KLGDEIKADIFA 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRA--THGVSISHRSHGSTGCRQDPGRVFKNKK 162
            G  VD T ++ GKGF GA+KR   G  R    HG S  HR  GS G   DP +VFK K 
Sbjct: 120 EGDKVDATAISKGKGFQGAIKR--LGQHRGPMAHG-SKFHRHQGSNGAASDPSKVFKGKG 176

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           M G MG  +VT++NLEVV VD +  L+L+KG VPG K+ S + +++S K+
Sbjct: 177 MPGHMGSVKVTIQNLEVVKVDAENNLLLIKGAVPGPKR-SLVTIKESVKA 225


>gi|288803933|ref|ZP_06409356.1| 50S ribosomal protein L3 [Prevotella melaninogenica D18]
 gi|302345074|ref|YP_003813427.1| 50S ribosomal protein L3 [Prevotella melaninogenica ATCC 25845]
 gi|288333566|gb|EFC72018.1| 50S ribosomal protein L3 [Prevotella melaninogenica D18]
 gi|302150099|gb|ADK96361.1| 50S ribosomal protein L3 [Prevotella melaninogenica ATCC 25845]
          Length = 204

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/203 (42%), Positives = 126/203 (62%), Gaps = 4/203 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G GEAK K  SK
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G F     +PKK L EF+  ++ +L   G   +   F+  + VDV G + GKGF G 
Sbjct: 63  PQQGHFKKAGTTPKKHLAEFKFDEEYNL---GDTVTVELFSNAKFVDVVGTSKGKGFQGV 119

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ ++THG     R  GS G    P +VFK  +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205
             +  LILVKG V G   ++ I+
Sbjct: 180 IPEHNLILVKGSVAGCNGSTVII 202


>gi|326803033|ref|YP_004320851.1| 50S ribosomal protein L3 [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651005|gb|AEA01188.1| 50S ribosomal protein L3 [Aerococcus urinae ACS-120-V-Col10a]
          Length = 211

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/215 (41%), Positives = 127/215 (59%), Gaps = 7/215 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT  +   G  +PVTV+      V+  +TL+ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGKKVGMTQFFTESGELVPVTVIEAQANVVLQVKTLENDGYEAVQLGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
            +KP +G  +    +PK+ + EF   KD +L    VGS      F  G +VDVTG + GK
Sbjct: 61  ANKPEQGHVAKAETTPKRFIREF---KDVELGEYEVGSEVKVDIFQEGDIVDVTGTSKGK 117

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF GA+KRH       +HG S  HR+ GS G   D  +VFK K + G+MGGN VT++NLE
Sbjct: 118 GFQGAIKRHGQQRGPMSHG-SHYHRAAGSMGMASDASKVFKGKNLPGQMGGNTVTIQNLE 176

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           +V V   + +ILVKG VPGAKK S + ++ + KSA
Sbjct: 177 IVKVMADKNVILVKGNVPGAKK-SLVEIKTAAKSA 210


>gi|224283709|ref|ZP_03647031.1| Ribosomal protein L3 [Bifidobacterium bifidum NCIMB 41171]
 gi|310288024|ref|YP_003939283.1| 50S ribosomal protein L3 [Bifidobacterium bifidum S17]
 gi|311064897|ref|YP_003971623.1| 50S ribosomal protein L3 RplC [Bifidobacterium bifidum PRL2010]
 gi|313140865|ref|ZP_07803058.1| 50S ribosomal protein L3 [Bifidobacterium bifidum NCIMB 41171]
 gi|309251961|gb|ADO53709.1| 50S ribosomal protein L3 [Bifidobacterium bifidum S17]
 gi|310867217|gb|ADP36586.1| RplC 50S ribosomal protein L3 [Bifidobacterium bifidum PRL2010]
 gi|313133375|gb|EFR50992.1| 50S ribosomal protein L3 [Bifidobacterium bifidum NCIMB 41171]
          Length = 217

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 119/209 (56%), Gaps = 2/209 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RKLGMT V++  G  +PVT++ +    V   ++ + +GY A+Q+G G+     V+KP
Sbjct: 11  LLGRKLGMTQVWDENGFFVPVTLVDVSTNVVTAVKSEETDGYKAIQIGYGQIDPTKVTKP 70

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + G F+   V+P++ L E R +   +  P G   S   F  G  VDVTG T GKGF+G +
Sbjct: 71  LAGHFAKAGVTPRRHLVEVRTEDAAEYEP-GQELSIDAFAEGSEVDVTGTTKGKGFAGTI 129

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR  F   R THG   + R  GS G    P R+ K K+MAGRMG    TV++L V+S D 
Sbjct: 130 KRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTATVQSLTVMSADA 189

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           +  ++ +KG +PG  K   +LVR + K A
Sbjct: 190 ENNVLAIKGAIPGP-KGGIVLVRTAVKGA 217


>gi|163815975|ref|ZP_02207345.1| hypothetical protein COPEUT_02155 [Coprococcus eutactus ATCC 27759]
 gi|158448785|gb|EDP25780.1| hypothetical protein COPEUT_02155 [Coprococcus eutactus ATCC 27759]
          Length = 227

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 126/228 (55%), Gaps = 19/228 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--- 57
           M+  ++A+K+GMT +++  G   PVTVL    C V   +T++ +GY A+QVG GE K   
Sbjct: 1   MKKAILAKKVGMTQIFDENGVLTPVTVLQAGPCVVTQIKTVENDGYDAIQVGFGEKKERV 60

Query: 58  -VKNVS------------KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
             K+VS            K   G       +PK    EFR++   +   +G+      F 
Sbjct: 61  TTKDVSGKKVIRNPHGAGKAEVGHAKKAGTTPKTFYREFRLENTAEY-ELGAEIKADVFA 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  +DVT  + GKG++G +KRH      + HG S  HR  GS G    PGRVFK KKM 
Sbjct: 120 AGDKIDVTAKSKGKGYAGGLKRHGLKSGPSGHG-SKYHRHAGSNGSATTPGRVFKGKKMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           G MG  RVT++NLEVV +D +  +ILVKG VPG KK S ++++D+ KS
Sbjct: 179 GHMGNVRVTIQNLEVVKIDVENNVILVKGAVPGPKK-SLVMIKDTVKS 225


>gi|86141140|ref|ZP_01059686.1| 50S ribosomal protein L3 [Leeuwenhoekiella blandensis MED217]
 gi|85831699|gb|EAQ50154.1| 50S ribosomal protein L3 [Leeuwenhoekiella blandensis MED217]
          Length = 203

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/206 (40%), Positives = 122/206 (59%), Gaps = 6/206 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C V   RT + +GY A+Q+G  +AK  N  
Sbjct: 2   SGLIGKKVGMTSIFDENGKNIPCTVIEAGPCVVTQVRTEEVDGYSALQLGFDDAKTAN-- 59

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K  +G         K+K+ EF  Q  +    +G   +   F  GQ VDV G + GKGF G
Sbjct: 60  KAAQGHAKKAGTVAKRKVVEF--QDFEGEYKLGDAVTVEVFKEGQFVDVAGTSKGKGFQG 117

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG+ ++THG     R+ GS G    P RVFK  +MAG+MG  RV V+NL V+ 
Sbjct: 118 VVKRHGFGGVGQSTHGQHNRLRAPGSIGAASYPSRVFKGMRMAGQMGNERVKVQNLRVLK 177

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L++VKGCVPG  KNS++++ 
Sbjct: 178 VVAEKNLLVVKGCVPG-HKNSYVIIE 202


>gi|317126861|ref|YP_004093143.1| 50S ribosomal protein L3 [Bacillus cellulosilyticus DSM 2522]
 gi|315471809|gb|ADU28412.1| 50S ribosomal protein L3 [Bacillus cellulosilyticus DSM 2522]
          Length = 211

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/215 (40%), Positives = 125/215 (58%), Gaps = 4/215 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  +PVTV+      V+  +T +  GY A+Q+G  + K   
Sbjct: 1   MAKGILGKKIGMTQIFAENGEVVPVTVIEATPNVVLQKKTTEGEGYEAIQLGFDDKKQIQ 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G       +PK+ + EFR+    +   +G       F VG +VDVTG + GKGF
Sbjct: 61  QTKPAKGHAEKAKTNPKRFVKEFRLSNVAEY-EIGQEVKVDTFAVGDIVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRHN      +HG S  HR  GS G   DP  V K K + GRMGG +VT++NLE+V
Sbjct: 120 QGAIKRHNQSRGPMSHG-SRYHRRPGSMGPV-DPNHVRKGKLLPGRMGGEQVTIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            VD +R L+LVKG VPGA+K S++ V+ + K+   
Sbjct: 178 RVDTERNLLLVKGNVPGARK-SYVTVQSAVKATAE 211


>gi|228898863|ref|ZP_04063145.1| 50S ribosomal protein L3 [Bacillus thuringiensis IBL 4222]
 gi|228905907|ref|ZP_04069804.1| 50S ribosomal protein L3 [Bacillus thuringiensis IBL 200]
 gi|228937413|ref|ZP_04100059.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228963210|ref|ZP_04124379.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228976869|ref|ZP_04137281.1| 50S ribosomal protein L3 [Bacillus thuringiensis Bt407]
 gi|229009619|ref|ZP_04166845.1| 50S ribosomal protein L3 [Bacillus mycoides DSM 2048]
 gi|229015512|ref|ZP_04172510.1| 50S ribosomal protein L3 [Bacillus cereus AH1273]
 gi|229021721|ref|ZP_04178303.1| 50S ribosomal protein L3 [Bacillus cereus AH1272]
 gi|229027958|ref|ZP_04184111.1| 50S ribosomal protein L3 [Bacillus cereus AH1271]
 gi|229074171|ref|ZP_04207217.1| 50S ribosomal protein L3 [Bacillus cereus Rock4-18]
 gi|229083430|ref|ZP_04215778.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-44]
 gi|229094832|ref|ZP_04225837.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-29]
 gi|229100909|ref|ZP_04231713.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-28]
 gi|229113786|ref|ZP_04243221.1| 50S ribosomal protein L3 [Bacillus cereus Rock1-3]
 gi|229165098|ref|ZP_04292893.1| 50S ribosomal protein L3 [Bacillus cereus AH621]
 gi|229170961|ref|ZP_04298562.1| 50S ribosomal protein L3 [Bacillus cereus MM3]
 gi|228612501|gb|EEK69722.1| 50S ribosomal protein L3 [Bacillus cereus MM3]
 gi|228618361|gb|EEK75391.1| 50S ribosomal protein L3 [Bacillus cereus AH621]
 gi|228669657|gb|EEL25064.1| 50S ribosomal protein L3 [Bacillus cereus Rock1-3]
 gi|228682488|gb|EEL36561.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-28]
 gi|228688575|gb|EEL42448.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-29]
 gi|228699863|gb|EEL52500.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-44]
 gi|228708941|gb|EEL61068.1| 50S ribosomal protein L3 [Bacillus cereus Rock4-18]
 gi|228733346|gb|EEL84175.1| 50S ribosomal protein L3 [Bacillus cereus AH1271]
 gi|228739589|gb|EEL90003.1| 50S ribosomal protein L3 [Bacillus cereus AH1272]
 gi|228745799|gb|EEL95803.1| 50S ribosomal protein L3 [Bacillus cereus AH1273]
 gi|228751641|gb|EEM01441.1| 50S ribosomal protein L3 [Bacillus mycoides DSM 2048]
 gi|228782839|gb|EEM31005.1| 50S ribosomal protein L3 [Bacillus thuringiensis Bt407]
 gi|228796468|gb|EEM43907.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228822246|gb|EEM68228.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228853722|gb|EEM98482.1| 50S ribosomal protein L3 [Bacillus thuringiensis IBL 200]
 gi|228860763|gb|EEN05141.1| 50S ribosomal protein L3 [Bacillus thuringiensis IBL 4222]
          Length = 199

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/200 (44%), Positives = 124/200 (62%), Gaps = 4/200 (2%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V+   G  IPVTV+  +   V+  +T + +GY A+Q+G  + + K  +KP +G  + 
Sbjct: 1   MTQVFAENGELIPVTVIAANPNVVLQKKTTETDGYNAIQLGFEDKREKLTNKPEQGHTAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
            + +PK+ + E R   D D L VG       F  G++VDVTG++ GKGF G +KRH    
Sbjct: 61  ASTTPKRFIREIR-DADVDGLEVGQEVKVEVFAAGEIVDVTGISKGKGFQGVIKRHGQSR 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
              +HG S  HR  GS G    P RVFK KK+AGRMGG++VT++NLE+V VD +R L+LV
Sbjct: 120 GPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIVQVDTERNLLLV 177

Query: 192 KGCVPGAKKNSWILVRDSFK 211
           KG VPGAKK S ++V+ + K
Sbjct: 178 KGNVPGAKK-SLVVVQGAVK 196


>gi|260061897|ref|YP_003194977.1| 50S ribosomal protein L3 [Robiginitalea biformata HTCC2501]
 gi|88786030|gb|EAR17199.1| 50S ribosomal protein L3 [Robiginitalea biformata HTCC2501]
          Length = 196

 Score =  146 bits (369), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/197 (41%), Positives = 117/197 (59%), Gaps = 3/197 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT +++  G+ IP TV+    C V   RT + +GY A+Q+G  +   K  +K   G F  
Sbjct: 1   MTSIFDENGKNIPCTVIEAGPCVVTQVRTEEVDGYNALQLGFDDKADKRANKAENGHFKK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
              +PKKK+ EFR   ++    +G   +   F  G+ VDV G++ GKGF G +KRH FGG
Sbjct: 61  AGTAPKKKVVEFRYF-EEGAFKLGDTINVELFKEGEFVDVNGISKGKGFQGVVKRHGFGG 119

Query: 132 L-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
           + ++THG     R+ GS G   DP RVFK  KMAG+MG  RVTV+NL V+ V  ++ L++
Sbjct: 120 VGQSTHGQHNRLRAPGSIGAASDPSRVFKGMKMAGQMGNQRVTVQNLRVLKVVPEKNLLV 179

Query: 191 VKGCVPGAKKNSWILVR 207
           +KG VPG  KN++I + 
Sbjct: 180 LKGAVPG-HKNAYITIE 195


>gi|225436243|ref|XP_002271466.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 281

 Score =  146 bits (369), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/199 (41%), Positives = 113/199 (56%), Gaps = 2/199 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62
           GV+A KLGM   +  EG+ +PVTV+      +V   +T   +GY AVQVG    + + ++
Sbjct: 67  GVMATKLGMMSYFEPEGKVVPVTVVGFREGNIVTQVKTEATDGYSAVQVGYRRVRDRKLT 126

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G        P + L EFR+   D   P   +     F  G LVDV+G+TIGKGF G
Sbjct: 127 KPEMGHLEKAGTIPMRHLQEFRLVSVDGFEPNQKLVFEELFKEGDLVDVSGITIGKGFQG 186

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHNF     THG S SHR+ GS G    PG V+K KKM GRMGG +  ++ L++V +
Sbjct: 187 GIKRHNFRRGPMTHG-SKSHRALGSIGAGTTPGHVYKGKKMPGRMGGTKTKIRKLKIVKI 245

Query: 183 DDKRGLILVKGCVPGAKKN 201
           D+   ++++KG VPG   N
Sbjct: 246 DNDLRVVMIKGAVPGKPGN 264


>gi|149198922|ref|ZP_01875963.1| 50S ribosomal protein L3 [Lentisphaera araneosa HTCC2155]
 gi|149137917|gb|EDM26329.1| 50S ribosomal protein L3 [Lentisphaera araneosa HTCC2155]
          Length = 210

 Score =  146 bits (369), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/197 (43%), Positives = 119/197 (60%), Gaps = 4/197 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           +G++ +KLGMT VY+ +GR +PVTV+    C V+  +T DK+ Y A+Q+G G  + KNVS
Sbjct: 2   TGIIGKKLGMTQVYDDKGRLVPVTVIEAGPCPVLDVKTNDKDSYSALQIGFGSKRAKNVS 61

Query: 63  KPMRGFFSSVN--VSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           K + G  +  N   +P   + E R++ D D   VGSV +   F+    VDV G T G+GF
Sbjct: 62  KAVLGHLAKSNNQENPPALIKEIRLEADSD-KEVGSVLTVEEFSDIAYVDVIGTTKGRGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NFGG RA+HG     R  GS G    PGRVFK KKM G MG  + T + L+V+
Sbjct: 121 QGVVKRWNFGGGRASHGGDW-ERKGGSIGMCNWPGRVFKGKKMPGHMGSVQRTSQGLKVI 179

Query: 181 SVDDKRGLILVKGCVPG 197
            V  +  +++VKG VPG
Sbjct: 180 QVRPEENILMVKGAVPG 196


>gi|310829585|ref|YP_003961942.1| ribosomal protein L3 [Eubacterium limosum KIST612]
 gi|308741319|gb|ADO38979.1| ribosomal protein L3 [Eubacterium limosum KIST612]
          Length = 209

 Score =  146 bits (369), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 118/212 (55%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT ++   G  +PVTV+    C VV  + +D +GY AVQ+  G+ K K 
Sbjct: 1   MKKAIIGKKIGMTQIFTENGTVVPVTVVEAGPCVVVQKKNMDVDGYEAVQLAYGDVKEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G +    V  KK + EF++  D D    G V     F  G  VD++G + GKGF
Sbjct: 61  VTKPLKGHYDKHGVEYKKVIREFKLD-DYDAFETGQVIKADMFEAGDKVDISGKSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HRS GS G    P RV K K + G+MG   VT  NLEVV
Sbjct: 120 QGVIKRHGQSRGPMAHG-SKYHRSPGSMGASAYPARVMKGKNLPGQMGNKNVTALNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  +  ++L+KG VPG  + S + ++ S K+
Sbjct: 179 QVSAEDNILLIKGAVPGP-RGSLVSIKSSVKA 209


>gi|228925363|ref|ZP_04088459.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228931612|ref|ZP_04094518.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228943916|ref|ZP_04106301.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228950658|ref|ZP_04112792.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228956551|ref|ZP_04118347.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229041015|ref|ZP_04189778.1| 50S ribosomal protein L3 [Bacillus cereus AH676]
 gi|229067875|ref|ZP_04201192.1| 50S ribosomal protein L3 [Bacillus cereus F65185]
 gi|229077410|ref|ZP_04210063.1| 50S ribosomal protein L3 [Bacillus cereus Rock4-2]
 gi|229107796|ref|ZP_04237432.1| 50S ribosomal protein L3 [Bacillus cereus Rock1-15]
 gi|229119772|ref|ZP_04249033.1| 50S ribosomal protein L3 [Bacillus cereus 95/8201]
 gi|229125627|ref|ZP_04254659.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-Cer4]
 gi|229136956|ref|ZP_04265583.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST26]
 gi|229142916|ref|ZP_04271357.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST24]
 gi|229148519|ref|ZP_04276775.1| 50S ribosomal protein L3 [Bacillus cereus m1550]
 gi|229159283|ref|ZP_04287307.1| 50S ribosomal protein L3 [Bacillus cereus R309803]
 gi|229176710|ref|ZP_04304114.1| 50S ribosomal protein L3 [Bacillus cereus 172560W]
 gi|228606753|gb|EEK64170.1| 50S ribosomal protein L3 [Bacillus cereus 172560W]
 gi|228624175|gb|EEK80977.1| 50S ribosomal protein L3 [Bacillus cereus R309803]
 gi|228634935|gb|EEK91508.1| 50S ribosomal protein L3 [Bacillus cereus m1550]
 gi|228640537|gb|EEK96926.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST24]
 gi|228646494|gb|EEL02701.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST26]
 gi|228657819|gb|EEL13625.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-Cer4]
 gi|228663673|gb|EEL19252.1| 50S ribosomal protein L3 [Bacillus cereus 95/8201]
 gi|228675645|gb|EEL30853.1| 50S ribosomal protein L3 [Bacillus cereus Rock1-15]
 gi|228705901|gb|EEL58234.1| 50S ribosomal protein L3 [Bacillus cereus Rock4-2]
 gi|228715234|gb|EEL67093.1| 50S ribosomal protein L3 [Bacillus cereus F65185]
 gi|228727312|gb|EEL78506.1| 50S ribosomal protein L3 [Bacillus cereus AH676]
 gi|228803116|gb|EEM49938.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228809009|gb|EEM55494.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228815749|gb|EEM61985.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228828040|gb|EEM73768.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228834285|gb|EEM79826.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 199

 Score =  146 bits (369), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/200 (44%), Positives = 124/200 (62%), Gaps = 4/200 (2%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V+   G  IPVTV+  +   V+  +T + +GY A+Q+G  + + K  +KP +G  + 
Sbjct: 1   MTQVFAENGELIPVTVIAANPNVVLQKKTTETDGYNAIQLGFEDKREKLTNKPEQGHTAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
            + +PK+ + E R   D D L VG       F  G++VDVTG++ GKGF G +KRH    
Sbjct: 61  ASTTPKRFIREIR-DADVDGLEVGQEVKVDVFATGEIVDVTGISKGKGFQGVIKRHGQSR 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
              +HG S  HR  GS G    P RVFK KK+AGRMGG++VT++NLE+V VD +R L+LV
Sbjct: 120 GPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIVQVDTERNLLLV 177

Query: 192 KGCVPGAKKNSWILVRDSFK 211
           KG VPGAKK S ++V+ + K
Sbjct: 178 KGNVPGAKK-SLVVVQGAVK 196


>gi|226309808|ref|YP_002769702.1| 50S ribosomal protein L3 [Brevibacillus brevis NBRC 100599]
 gi|254803658|sp|C0ZII0|RL3_BREBN RecName: Full=50S ribosomal protein L3
 gi|226092756|dbj|BAH41198.1| 50S ribosomal protein L3 [Brevibacillus brevis NBRC 100599]
          Length = 209

 Score =  146 bits (368), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/211 (40%), Positives = 124/211 (58%), Gaps = 4/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT V+   G    VTV+ + +  V+  + ++ +GY A+Q+G  + K + 
Sbjct: 1   MTKGILGKKLGMTQVFGPNGTATAVTVIEVGSNVVLQKKDVETDGYEAIQIGFEDKKEQR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + E R     D   VG       F  G++VDV G++ GKGF
Sbjct: 61  ANKPEKGHAAKANTAPKRFIREIRGVNLADY-EVGQELKADIFAEGEMVDVAGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRHN       HG S  HR  GS G    P RVFK + + G+MGG+ VT++NLEV+
Sbjct: 120 QGAIKRHNQSRGPMAHG-SRYHRGPGSMGAVA-PNRVFKGQTLPGQMGGDNVTIQNLEVI 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L+LVKG VPG  KNS +LV  + K
Sbjct: 178 KVDTERNLVLVKGSVPGP-KNSCVLVSTAVK 207


>gi|229542203|ref|ZP_04431263.1| ribosomal protein L3 [Bacillus coagulans 36D1]
 gi|229326623|gb|EEN92298.1| ribosomal protein L3 [Bacillus coagulans 36D1]
          Length = 209

 Score =  146 bits (368), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/212 (41%), Positives = 123/212 (58%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY A+Q+G  +   + 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTVETDGYEAIQLGFADKPERL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  S  N +PK+ + EF      D   VG       F  G +VDVTG+T GKGF
Sbjct: 61  ANKPEKGHVSKANAAPKRFIREFSGVNTSDF-EVGQEVKVDIFAEGDIVDVTGVTKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFK K + GRMGG RVTV+NL++V
Sbjct: 120 QGVIKRHGQHRGPMAHG-SRYHRRPGSMGPIA-PNRVFKQKALPGRMGGERVTVQNLQIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPG +K + + V+ + K+
Sbjct: 178 KVDAERNLLLIKGNVPGPRK-ALVTVKAAVKA 208


>gi|320103617|ref|YP_004179208.1| 50S ribosomal protein L3P [Isosphaera pallida ATCC 43644]
 gi|319750899|gb|ADV62659.1| LSU ribosomal protein L3P [Isosphaera pallida ATCC 43644]
          Length = 212

 Score =  146 bits (368), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/210 (41%), Positives = 120/210 (57%), Gaps = 3/210 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT +Y  +G+ +PVTVL    C V+  +T + +GY AVQ+G  + K K 
Sbjct: 1   MVVGLLGRKVGMTQIYREDGQAVPVTVLECGPCTVLQVKTPETDGYCAVQLGYLDRKRKT 60

Query: 61  VSKPMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            +   RG      N  PK+ + E R Q +   L +G   + S F   + VDVTG++ G+G
Sbjct: 61  ATAAARGHARKAGNAEPKRYIREIR-QDEPPTLKLGDQLTVSVFEAIKRVDVTGVSKGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRH F GLRATHGV   HR  GS+G   DP R  K  +  G  G  +VT  NLEV
Sbjct: 120 FAGVVKRHGFRGLRATHGVKRMHRHPGSSGPSADPSRTRKGIRKPGHFGHAKVTALNLEV 179

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           V VD    L++VKG VPG     ++ VR +
Sbjct: 180 VKVDPDANLLVVKGAVPGP-NGGFVTVRQT 208


>gi|312899043|ref|ZP_07758427.1| 50S ribosomal protein L3 [Megasphaera micronuciformis F0359]
 gi|310619828|gb|EFQ03404.1| 50S ribosomal protein L3 [Megasphaera micronuciformis F0359]
          Length = 212

 Score =  146 bits (368), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/213 (43%), Positives = 128/213 (60%), Gaps = 5/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ +KLGMT V+  EG  +PVTV+      VV  +T+D +GY ++Q+G GE K K+
Sbjct: 1   MSKAILGKKLGMTQVFTEEGAVVPVTVVEASPNVVVRVKTVDTDGYNSIQLGYGEIKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP++G F    VSP K L E R+  D     VG   +   F  G LVDV G T GKGF
Sbjct: 61  LTKPVKGQFDKAGVSPVKHLRELRLT-DTPEYTVGQTLAADIFASGDLVDVVGTTKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTG--CRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KRH F      HG S SHR  GS G       G+V K KK+ G+MGGN+ TV +L 
Sbjct: 120 AGTIKRHGFHRGPMGHG-SKSHREPGSLGPMISGGGGKVIKGKKLPGQMGGNQATVLHLS 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           VV VD ++ +IL+KG +PG  K S +++RD+ K
Sbjct: 179 VVKVDTEKNIILIKGGIPGP-KGSIVMIRDTVK 210


>gi|293375389|ref|ZP_06621670.1| 50S ribosomal protein L3 [Turicibacter sanguinis PC909]
 gi|325844417|ref|ZP_08168144.1| 50S ribosomal protein L3 [Turicibacter sp. HGF1]
 gi|292645942|gb|EFF63971.1| 50S ribosomal protein L3 [Turicibacter sanguinis PC909]
 gi|325489091|gb|EGC91475.1| 50S ribosomal protein L3 [Turicibacter sp. HGF1]
          Length = 209

 Score =  146 bits (368), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT +++ EG+ IPVTV+      V+  +T + +GY AVQVG    + K 
Sbjct: 1   MAKGILGRKIGMTQIFSEEGKLIPVTVVQATPNVVLQVKTNETDGYEAVQVGFETKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP  G  +    +PK+ + EFR   D     VG       F  G++VDVTG T GKGF
Sbjct: 61  ANKPEMGHVAKAETAPKRFIREFR-NLDVAEYQVGQEIKVDTFAEGEIVDVTGKTKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G      RV K KK+ G+ GGN VTV+NLE+V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGSIA-ANRVLKGKKLPGQTGGNIVTVQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R ++L+KG VPGAKK S ++VR + K+
Sbjct: 178 KVDTERNVLLIKGNVPGAKK-SLVMVRSAVKA 208


>gi|323354876|gb|EGA86709.1| Mrpl9p [Saccharomyces cerevisiae VL3]
          Length = 148

 Score =  146 bits (368), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/147 (49%), Positives = 101/147 (68%), Gaps = 1/147 (0%)

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M G F+S  V+PK+ + EFRV+ +  L+P G++  PS+F  GQ VDV  ++ GKGF+G M
Sbjct: 1   MLGHFASKVVNPKEXVAEFRVKDEKGLIPPGTLLKPSFFKEGQYVDVRSVSKGKGFTGVM 60

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR+ F GLRA+HG SI HR  GS G  QDPGRV   +KM G MG   VT++N++V+ VDD
Sbjct: 61  KRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVLKVDD 120

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
           +  +I VKG V G  KNS++ ++D+ K
Sbjct: 121 ENNVIWVKGSVAGP-KNSFVKIQDAIK 146


>gi|16804670|ref|NP_466155.1| 50S ribosomal protein L3 [Listeria monocytogenes EGD-e]
 gi|46908804|ref|YP_015193.1| 50S ribosomal protein L3 [Listeria monocytogenes str. 4b F2365]
 gi|47094372|ref|ZP_00232066.1| ribosomal protein L3 [Listeria monocytogenes str. 4b H7858]
 gi|217966169|ref|YP_002351847.1| ribosomal protein L3 [Listeria monocytogenes HCC23]
 gi|224499305|ref|ZP_03667654.1| 50S ribosomal protein L3 [Listeria monocytogenes Finland 1988]
 gi|224503574|ref|ZP_03671881.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL R2-561]
 gi|226225177|ref|YP_002759284.1| ribosomal protein L3 [Listeria monocytogenes Clip81459]
 gi|254825007|ref|ZP_05230008.1| ribosomal protein L3 [Listeria monocytogenes FSL J1-194]
 gi|254829081|ref|ZP_05233768.1| ribosomal protein L3 [Listeria monocytogenes FSL N3-165]
 gi|254830936|ref|ZP_05235591.1| 50S ribosomal protein L3 [Listeria monocytogenes 10403S]
 gi|254854162|ref|ZP_05243510.1| ribosomal protein L3 [Listeria monocytogenes FSL R2-503]
 gi|254899917|ref|ZP_05259841.1| 50S ribosomal protein L3 [Listeria monocytogenes J0161]
 gi|254912877|ref|ZP_05262889.1| 50S ribosomal protein L3 [Listeria monocytogenes J2818]
 gi|254931098|ref|ZP_05264457.1| ribosomal protein L3 [Listeria monocytogenes HPB2262]
 gi|254937257|ref|ZP_05268954.1| ribosomal protein L3 [Listeria monocytogenes F6900]
 gi|254991854|ref|ZP_05274044.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL J2-064]
 gi|255027144|ref|ZP_05299130.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL J2-003]
 gi|255029693|ref|ZP_05301644.1| 50S ribosomal protein L3 [Listeria monocytogenes LO28]
 gi|255519640|ref|ZP_05386877.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL J1-175]
 gi|284800482|ref|YP_003412347.1| 50S ribosomal protein L3 [Listeria monocytogenes 08-5578]
 gi|284993668|ref|YP_003415436.1| 50S ribosomal protein L3 [Listeria monocytogenes 08-5923]
 gi|290891817|ref|ZP_06554814.1| ribosomal protein L3 [Listeria monocytogenes FSL J2-071]
 gi|300763617|ref|ZP_07073615.1| ribosomal protein L3 [Listeria monocytogenes FSL N1-017]
 gi|42559668|sp|Q8Y440|RL3_LISMO RecName: Full=50S ribosomal protein L3
 gi|67461150|sp|Q71WE6|RL3_LISMF RecName: Full=50S ribosomal protein L3
 gi|254803678|sp|B8DB08|RL3_LISMH RecName: Full=50S ribosomal protein L3
 gi|259709728|sp|C1KZI0|RL3_LISMC RecName: Full=50S ribosomal protein L3
 gi|16412120|emb|CAD00710.1| ribosomal protein L3 [Listeria monocytogenes EGD-e]
 gi|46882077|gb|AAT05370.1| ribosomal protein L3 [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47017254|gb|EAL08093.1| ribosomal protein L3 [Listeria monocytogenes str. 4b H7858]
 gi|217335439|gb|ACK41233.1| ribosomal protein L3 [Listeria monocytogenes HCC23]
 gi|225877639|emb|CAS06353.1| ribosomal protein L3 [Listeria monocytogenes serotype 4b str. CLIP
           80459]
 gi|258601491|gb|EEW14816.1| ribosomal protein L3 [Listeria monocytogenes FSL N3-165]
 gi|258607554|gb|EEW20162.1| ribosomal protein L3 [Listeria monocytogenes FSL R2-503]
 gi|258609863|gb|EEW22471.1| ribosomal protein L3 [Listeria monocytogenes F6900]
 gi|284056044|gb|ADB66985.1| 50S ribosomal protein L3 [Listeria monocytogenes 08-5578]
 gi|284059135|gb|ADB70074.1| 50S ribosomal protein L3 [Listeria monocytogenes 08-5923]
 gi|290558411|gb|EFD91928.1| ribosomal protein L3 [Listeria monocytogenes FSL J2-071]
 gi|293582645|gb|EFF94677.1| ribosomal protein L3 [Listeria monocytogenes HPB2262]
 gi|293590876|gb|EFF99210.1| 50S ribosomal protein L3 [Listeria monocytogenes J2818]
 gi|293594248|gb|EFG02009.1| ribosomal protein L3 [Listeria monocytogenes FSL J1-194]
 gi|300515894|gb|EFK42943.1| ribosomal protein L3 [Listeria monocytogenes FSL N1-017]
 gi|307572221|emb|CAR85400.1| rplC [Listeria monocytogenes L99]
 gi|328468116|gb|EGF39122.1| 50S ribosomal protein L3 [Listeria monocytogenes 1816]
 gi|328469805|gb|EGF40722.1| 50S ribosomal protein L3 [Listeria monocytogenes 220]
          Length = 209

 Score =  146 bits (368), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/212 (39%), Positives = 127/212 (59%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGRKVGMTQVFTENGELIPVTVIEAAQNVVLQKKTVETDGYEAVQIGFEDKRAIL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EFR   + D   +G+      F  G ++D TG++ GKGF
Sbjct: 61  SNKPEQGHVAKANTTPKRFIREFR-DVNLDEYEIGAEVKVDVFAEGDIIDATGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK + GRMGG ++T++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQITIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD ++ ++LVKG VPGAKK + + ++ + K+
Sbjct: 178 KVDVEKNVLLVKGNVPGAKK-ALVQIKTATKA 208


>gi|291518045|emb|CBK73266.1| LSU ribosomal protein L3P [Butyrivibrio fibrisolvens 16/4]
          Length = 227

 Score =  146 bits (368), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/230 (41%), Positives = 124/230 (53%), Gaps = 23/230 (10%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK- 59
           M+  ++A K+GMT V+N  G  IPVTVL    C V   +T++ +GY AVQVG  + KVK 
Sbjct: 1   MKKAILATKVGMTQVFNEGGELIPVTVLSAGPCVVTQIKTVENDGYDAVQVGFVDKKVKL 60

Query: 60  ---------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
                           V+KP +G F    V PK+ + EFR     D   +        F 
Sbjct: 61  VNKDANGRKEIIHRNGVNKPEKGHFDKAGVEPKRFVREFRFDNCADYA-LAQEIKADIFE 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRA--THGVSISHRSHGSTGCRQDPGRVFKNKK 162
            G  VD T  + GKGF GA+KR   G  R    HG S  HR  GS G    P RVFK K 
Sbjct: 120 AGDKVDATATSKGKGFQGAIKR--LGQHRGPMAHG-SKFHRHQGSNGACSSPSRVFKGKG 176

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           M G+MGG RVT++NLE+V VD +  L+LVKG VPG KK S + +++S K+
Sbjct: 177 MPGQMGGTRVTIQNLEIVRVDVENNLLLVKGAVPGPKK-SLVTIKESVKA 225


>gi|210623188|ref|ZP_03293627.1| hypothetical protein CLOHIR_01577 [Clostridium hiranonis DSM 13275]
 gi|210153725|gb|EEA84731.1| hypothetical protein CLOHIR_01577 [Clostridium hiranonis DSM 13275]
          Length = 209

 Score =  146 bits (368), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/210 (43%), Positives = 134/210 (63%), Gaps = 4/210 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++  EG  IPVTV+ +    V   +T++ +GY A+QVG  +AK K+++K
Sbjct: 3   GILGKKVGMTQIFTEEGVVIPVTVVEVGPVVVTQVKTIENDGYNAIQVGFEDAKEKSLNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G  ++ NV  KK L EFRV+   +   VG       F  G  +DVTG++ GKGF G 
Sbjct: 63  PAKGHLAAANVL-KKHLKEFRVENAAEYT-VGQEIKADIFEAGAKIDVTGISKGKGFQGP 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KRH       THG S  HR  GS G    PGRVFKNKK+AG MG  +VT++NL++V VD
Sbjct: 121 IKRHGQSRGPETHG-SRYHRRPGSMGACSYPGRVFKNKKLAGHMGSVKVTIQNLDLVRVD 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            ++ L+LVKG +PGA K S + ++++ K++
Sbjct: 180 AEKNLMLVKGAIPGA-KGSVVTIKEAVKAS 208


>gi|260592765|ref|ZP_05858223.1| 50S ribosomal protein L3 [Prevotella veroralis F0319]
 gi|260535296|gb|EEX17913.1| 50S ribosomal protein L3 [Prevotella veroralis F0319]
          Length = 204

 Score =  146 bits (368), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/203 (42%), Positives = 125/203 (61%), Gaps = 4/203 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G GEAK K  SK
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G F     SPKK L EF+  ++ +L   G   +   F   + VDV G + GKGF G 
Sbjct: 63  PQQGHFKKAGTSPKKHLAEFKFDEEYNL---GDTITVELFNDVKFVDVVGTSKGKGFQGV 119

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ ++THG     R  GS G    P +VFK  +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205
             +  LILVKG V G   ++ I+
Sbjct: 180 IPEHNLILVKGSVAGCNGSTVII 202


>gi|294496983|ref|YP_003560683.1| 50S ribosomal protein L3 [Bacillus megaterium QM B1551]
 gi|294496985|ref|YP_003560685.1| 50S ribosomal protein L3 [Bacillus megaterium QM B1551]
 gi|295702350|ref|YP_003595425.1| 50S ribosomal protein L3 [Bacillus megaterium DSM 319]
 gi|294346920|gb|ADE67249.1| 50S ribosomal protein L3 [Bacillus megaterium QM B1551]
 gi|294346922|gb|ADE67251.1| 50S ribosomal protein L3 [Bacillus megaterium QM B1551]
 gi|294800009|gb|ADF37075.1| 50S ribosomal protein L3 [Bacillus megaterium DSM 319]
          Length = 209

 Score =  145 bits (367), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +  + +GY A+Q+G  + + K 
Sbjct: 1   MAKGILGRKIGMTQVFAENGDLIPVTVIEASANVVLQVKNAETDGYEAIQLGFEDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + E R   D     VG       F  G ++DVTG++ GKGF
Sbjct: 61  SNKPAKGHATKANTAPKRFIRELR-GVDASAYEVGQEVKVDIFAEGDVIDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH       +HG S  HR  GS G    P RVFK K + GRMGG R+TV+NL +V
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGERITVQNLSIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA+K S + V+ + KS
Sbjct: 178 KVDAERNLLLVKGNVPGARK-SLVTVKSAVKS 208


>gi|328949277|ref|YP_004366614.1| 50S ribosomal protein L3 [Treponema succinifaciens DSM 2489]
 gi|328449601|gb|AEB15317.1| 50S ribosomal protein L3 [Treponema succinifaciens DSM 2489]
          Length = 206

 Score =  145 bits (367), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/208 (42%), Positives = 125/208 (60%), Gaps = 5/208 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++A+K+GMT V++  G   PVTV+ ++   VV  +T +K GY AV +G  + K   ++K
Sbjct: 3   GLIAKKVGMTQVFDENGNLTPVTVIRVEPNTVVATKTQEKCGYEAVVLGLEDLKPHKITK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P    F   N++PK+ L EFR  + +  + VG       F   + +DVT  + GKGF G 
Sbjct: 63  PYAKQFPE-NITPKRHLKEFRDFEGE--VKVGDQIGVELFEKVRFIDVTATSKGKGFQGV 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR  F G RATHG S  HR  G TGC   PG   KN KM GRMG +RVTV+NL+VV VD
Sbjct: 120 MKRWGFHGGRATHG-SKFHREAGGTGCCTTPGHCLKNVKMPGRMGFDRVTVQNLKVVKVD 178

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +  +++V+G VPG  +N  ++V+ + K
Sbjct: 179 PELNVLMVRGAVPGV-RNCTLIVKAAVK 205


>gi|302876534|ref|YP_003845167.1| 50S ribosomal protein L3 [Clostridium cellulovorans 743B]
 gi|307687207|ref|ZP_07629653.1| 50S ribosomal protein L3 [Clostridium cellulovorans 743B]
 gi|302579391|gb|ADL53403.1| 50S ribosomal protein L3 [Clostridium cellulovorans 743B]
          Length = 209

 Score =  145 bits (367), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 84/214 (39%), Positives = 128/214 (59%), Gaps = 7/214 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT +++   + IPVTV+    C V+  +T+DK+GY A+QVG G+ +   
Sbjct: 1   MKKAILGKKIGMTQIFDENRKLIPVTVVEAGPCVVIQKKTIDKDGYEAIQVGFGDKRENL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KPM+G F++  V  K+ + E R++ D     V   F    F  G+ VDV+G++ GKGF
Sbjct: 61  FNKPMKGHFAAAGVPVKRYVKELRLE-DVSGYNVKDEFKVDIFEAGEKVDVSGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRA--THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
            G +KR  +G  R   +HG S  HR+ GS G   DP R FKNKK+ G MG    TV NL 
Sbjct: 120 QGTIKR--WGAHRGPMSHG-SKFHRAPGSMGASSDPSRTFKNKKLPGHMGAKNTTVMNLT 176

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V  V   + +IL+KG VPG  K  ++++R++ K+
Sbjct: 177 VAKVMVDKNIILIKGAVPGPNK-GFVVIRNAVKA 209


>gi|72382967|ref|YP_292322.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. NATL2A]
 gi|109893537|sp|Q46IQ9|RL3_PROMT RecName: Full=50S ribosomal protein L3
 gi|72002817|gb|AAZ58619.1| LSU ribosomal protein L3P [Prochlorococcus marinus str. NATL2A]
          Length = 218

 Score =  145 bits (367), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +GR +PVT++    C++   ++ D +GY AVQ+G    + K 
Sbjct: 1   MSLGILGKKLGMSQLFDDQGRAVPVTLIEAGPCRITQLKSADTDGYAAVQIGFQLIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G  +       + L E+RV+   +   +G+  +   F  GQ VD++G T+G+GF
Sbjct: 61  INKPSKGHLAKSGNDLLRHLREYRVENSSEF-ELGASITVDDFEKGQKVDISGDTMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     +HG S +HR  GS G    PGRV+  K+MAGRMGG +VT + LE++
Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHRLPGSIGAGTTPGRVYPGKRMAGRMGGKKVTTRALEIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            +D    L++VKG VPG K  S + +R +
Sbjct: 179 KIDTNHNLLVVKGSVPG-KPGSLLNIRPA 206


>gi|225571552|ref|ZP_03780548.1| hypothetical protein CLOHYLEM_07650 [Clostridium hylemonae DSM
           15053]
 gi|225159629|gb|EEG72248.1| hypothetical protein CLOHYLEM_07650 [Clostridium hylemonae DSM
           15053]
          Length = 226

 Score =  145 bits (367), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/228 (38%), Positives = 125/228 (54%), Gaps = 19/228 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G   PVTVL    C V   +T + +GY AVQVG  + K K 
Sbjct: 1   MKKAILATKVGMTQIFNEDGTLTPVTVLQAGPCVVTQVKTAENDGYDAVQVGFVDKKEKT 60

Query: 61  V----------------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
           V                +K  +G F+   VS K+ + EF+ +   +   +        F 
Sbjct: 61  VNKDKSGKKEIVHRHGVTKAEQGHFAKAGVSGKRFVREFKFENASEY-ELAQEIKADIFE 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  +D T ++ GKGF GA+KRHN      THG S  HR  GS G   DP +VFK KKM 
Sbjct: 120 AGDKIDATAVSKGKGFQGAIKRHNQHRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           G MG  ++T++NLEVV VD +  L+LVKG VPG KK S + ++++ K+
Sbjct: 179 GHMGSKKITIQNLEVVRVDAENNLLLVKGSVPGPKK-SLVTIKEAVKA 225


>gi|319654868|ref|ZP_08008943.1| 50S ribosomal protein L3 [Bacillus sp. 2_A_57_CT2]
 gi|317393431|gb|EFV74194.1| 50S ribosomal protein L3 [Bacillus sp. 2_A_57_CT2]
          Length = 208

 Score =  145 bits (367), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/212 (41%), Positives = 127/212 (59%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  ++++ +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVVEAAPNVVLQMKSVETDGYEAIQLGFEDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EFR   D     VG       F  G+ VDVTG++ GKGF
Sbjct: 61  SNKPEKGHVAKANTAPKRFVREFR-GADLGQYEVGQEVKVDIFAEGETVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    P RVFK K + GRMGG ++TV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGEQITVQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA+K + + ++ + K+
Sbjct: 178 KVDAERNLLLIKGNVPGARK-ALVKIKSAVKA 208


>gi|269122979|ref|YP_003305556.1| 50S ribosomal protein L3 [Streptobacillus moniliformis DSM 12112]
 gi|268314305|gb|ACZ00679.1| ribosomal protein L3 [Streptobacillus moniliformis DSM 12112]
          Length = 208

 Score =  145 bits (367), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/208 (41%), Positives = 125/208 (60%), Gaps = 4/208 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT ++  E + IPVTV+      VV  +T++K GY ++ +   E + K V+KP
Sbjct: 2   ILGKKIGMTQIFENE-KLIPVTVIEAGPNFVVQTKTVEKEGYTSITLAYDEKREKLVNKP 60

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
             G F    ++ KK L EF+V+  ++   +G           + VD+ G++ GKG +G M
Sbjct: 61  EMGVFKKAGITAKKFLKEFKVESVEEF-ALGQELKVDVLEGIEFVDIQGISKGKGTAGVM 119

Query: 125 KRHNFGGLRATHGVSISHRSHGS-TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           KRHNFGG RATHGVS +HR  GS  G       V K KKMAGR+G   VTV+NL+VV  D
Sbjct: 120 KRHNFGGNRATHGVSRNHRLGGSNAGGAASNSNVPKGKKMAGRLGNENVTVQNLKVVKFD 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +  L+LVKG VPG  KN +++++ S K
Sbjct: 180 VENNLLLVKGAVPGP-KNGYLVIKKSIK 206


>gi|307297394|ref|ZP_07577200.1| 50S ribosomal protein L3 [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916654|gb|EFN47036.1| 50S ribosomal protein L3 [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 210

 Score =  145 bits (367), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/200 (43%), Positives = 118/200 (59%), Gaps = 7/200 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG----AGEAKVK 59
           G++ RKLGMT +Y  +G+   VTV+    C VV  +T D   Y A+QVG      E   K
Sbjct: 3   GILGRKLGMTTIYK-DGKAFGVTVVKAGPCTVVQKKTSDGGEYDAIQVGFEELTPERAKK 61

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++KP+   F +  V P + L EF+V   +D   VG +     F+ G+ VDVTG + G+G
Sbjct: 62  VLTKPLVKKFEAAKVKPHRILKEFKVGNINDF-NVGDIIEARVFSEGEKVDVTGFSKGRG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSGAMKR NF G  A+HG S  HR  GS G   +P +++K KKM G+ G  + TVKNL V
Sbjct: 121 FSGAMKRWNFRGGEASHG-SKFHRELGSVGNHTEPAKIWKGKKMPGQYGNEKKTVKNLTV 179

Query: 180 VSVDDKRGLILVKGCVPGAK 199
           V VD + GL+ + G VPGA+
Sbjct: 180 VKVDAENGLLAIYGAVPGAR 199


>gi|320166925|gb|EFW43824.1| mitochondrial ribosomal protein L3 [Capsaspora owczarzaki ATCC
           30864]
          Length = 566

 Score =  145 bits (366), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 84/212 (39%), Positives = 128/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
            R+GV+A K+GM   +N  G+R+P+TVL + +  V+  R  + +GY A+Q+ AGE  +K 
Sbjct: 323 QRTGVIATKVGMMHTWNHWGQRLPLTVLQISDAAVLDFRVPESHGYTALQIAAGE--IKQ 380

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +K + G F  V ++ +K + EFRV  +  L+P G+    ++F  GQ VDV   T G+GF
Sbjct: 381 PAKHVEGTFRRVGLTARKHIHEFRVTANA-LIPPGTRLYAAHFIPGQHVDVLANTKGRGF 439

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRH   G  A+HG S+ HR+ GS G     GRV+  K+MAG MG       NL V 
Sbjct: 440 AGVMKRHGMKGSPASHGHSLVHRAMGSFGGGGGMGRVYPGKRMAGHMGTIPAMHHNLLVY 499

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            ++ K  L+ VKG VPG +K +++ +RD+ ++
Sbjct: 500 RINTKHNLVYVKGSVPGPRK-AFVYLRDAVRA 530


>gi|212637954|ref|YP_002314474.1| 50S ribosomal protein L3 [Anoxybacillus flavithermus WK1]
 gi|212559434|gb|ACJ32489.1| Ribosomal protein L3 [Anoxybacillus flavithermus WK1]
          Length = 208

 Score =  145 bits (366), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/214 (42%), Positives = 124/214 (57%), Gaps = 8/214 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY A+Q+G  + + K  +K
Sbjct: 3   GILGRKIGMTQVFAENGDLIPVTVIQATPNVVLQKKTIENDGYEAIQLGFEDLREKLANK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G  +  N +PK+ + E R     +   VG       F  G++VDVTG + GKGF G 
Sbjct: 63  PQKGHAAKANTTPKRFIREIRGVNLAEY-EVGQEVKVDIFNEGEIVDVTGTSKGKGFQGV 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KRH        HG S  HR  GS G    P RVFK+K++ GRMGG RVTV+NL+VV VD
Sbjct: 122 IKRHGQSRGPMAHG-SRYHRRPGSMGPIA-PNRVFKSKELPGRMGGERVTVQNLKVVKVD 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
            +R LIL+KG VPG  K   I+     KSAV  K
Sbjct: 180 PERNLILIKGNVPGPNKGLVII-----KSAVKAK 208


>gi|295093643|emb|CBK82734.1| LSU ribosomal protein L3P [Coprococcus sp. ART55/1]
          Length = 227

 Score =  145 bits (366), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 125/228 (54%), Gaps = 19/228 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--- 57
           M+  ++A K+GMT +++  G   PVTVL    C V   +T++ +GY A+QVG GE K   
Sbjct: 1   MKKAILATKVGMTQIFDENGVLTPVTVLQAGPCVVTQIKTVENDGYDAIQVGFGEKKERV 60

Query: 58  -VKNVS------------KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
             K+VS            K   G       +PK    EFR++   +   +G+      F 
Sbjct: 61  TTKDVSGKKVIRNPHGAGKAEVGHAKKAGTTPKAFYREFRLENTAEY-ELGAEIKADVFA 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  +DVT  + GKG++G +KRH      + HG S  HR  GS G    PGRVFK KKM 
Sbjct: 120 AGDKIDVTAKSKGKGYAGGLKRHGLKSGPSGHG-SKYHRHAGSNGSATTPGRVFKGKKMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           G MG  RVT++NLEVV +D +  +ILVKG VPG KK S ++++D+ KS
Sbjct: 179 GHMGSVRVTIQNLEVVKIDVENNVILVKGAVPGPKK-SLVMIKDTVKS 225


>gi|297569422|ref|YP_003690766.1| 50S ribosomal protein L3 [Desulfurivibrio alkaliphilus AHT2]
 gi|296925337|gb|ADH86147.1| 50S ribosomal protein L3 [Desulfurivibrio alkaliphilus AHT2]
          Length = 210

 Score =  145 bits (366), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 85/198 (42%), Positives = 118/198 (59%), Gaps = 3/198 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT +++  G  IPVTV+    C V+  +TL K GY A+QVG G  K + ++K
Sbjct: 6   GLLGKKMGMTRIFSETGTAIPVTVIEAGPCVVLQKKTLAKEGYNAIQVGFGAKKEQRLNK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKGFSG 122
           P +G   +        + EFRV  D D   +G   S    F VG+LVDV   + G+GF G
Sbjct: 66  PEKGHAKAAGKGGFYHIKEFRVA-DPDAYELGQEISMTEIFNVGELVDVRARSKGRGFQG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRH F G RATHG S+ HR  G+ GC   P RV K KKM G+MG   VT KN  +V +
Sbjct: 125 VVKRHGFKGGRATHG-SMFHRRPGAIGCSAWPSRVIKGKKMPGQMGDQFVTKKNCTIVDI 183

Query: 183 DDKRGLILVKGCVPGAKK 200
             ++ +++VKG VPGAK+
Sbjct: 184 RPEQNVLVVKGGVPGAKE 201


>gi|229823535|ref|ZP_04449604.1| hypothetical protein GCWU000282_00833 [Catonella morbi ATCC 51271]
 gi|229786979|gb|EEP23093.1| hypothetical protein GCWU000282_00833 [Catonella morbi ATCC 51271]
          Length = 211

 Score =  145 bits (366), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 125/212 (58%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT  +   G  +PVTV+      V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGKKVGMTQFFTENGELVPVTVIEATPNVVLQVKTMENDGYEAVQLGFQDLREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EFR + +     VG   +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANATPKRFIREFR-EVELGEYQVGQEITVETFAAGDIVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    P RVFK K + G+ GG RVT++NLEVV
Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGGASFPSRVFKGKGLPGQTGGERVTIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +VD +  +IL+KG VPGAKK S + ++ + K+
Sbjct: 179 AVDVENNVILIKGNVPGAKK-SLVEIKQAIKT 209


>gi|197303812|ref|ZP_03168848.1| hypothetical protein RUMLAC_02551 [Ruminococcus lactaris ATCC
           29176]
 gi|197297105|gb|EDY31669.1| hypothetical protein RUMLAC_02551 [Ruminococcus lactaris ATCC
           29176]
          Length = 242

 Score =  145 bits (366), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 90/229 (39%), Positives = 126/229 (55%), Gaps = 20/229 (8%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M+  ++A K+GMT ++N E G  IPVTVL    C V   +T++ +GY AVQVG  + K K
Sbjct: 16  MKKAILATKVGMTQIFNEEDGVLIPVTVLQAGPCVVTQVKTVENDGYSAVQVGYVDKKEK 75

Query: 60  ----------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
                            V+K  +G F    VS K+ + EFR +  ++   +        F
Sbjct: 76  IVTKDNSGKKSIAHRNGVTKAEKGHFDKAGVSGKRYVKEFRFENAEEYT-LAQEIKADIF 134

Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
             G  +D T ++ GKGF GA+KRH       THG S  HR  GS G   DP +VFK KKM
Sbjct: 135 AAGDKIDATAISKGKGFQGAIKRHGQSRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKM 193

Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            G+MG  ++TV+NLEVV VD +  L+LVKG VPG KK   + ++++ K+
Sbjct: 194 PGQMGNKKITVQNLEVVRVDAENNLLLVKGSVPGPKK-CLVTIKETVKA 241


>gi|282881000|ref|ZP_06289691.1| 50S ribosomal protein L3 [Prevotella timonensis CRIS 5C-B1]
 gi|281305223|gb|EFA97292.1| 50S ribosomal protein L3 [Prevotella timonensis CRIS 5C-B1]
          Length = 204

 Score =  145 bits (365), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 84/195 (43%), Positives = 122/195 (62%), Gaps = 4/195 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V++ +G+ IP TV+    C V   +T++K+GY AVQ+G GEAK K  SK
Sbjct: 3   GLIGRKIGMTSVFSADGKNIPCTVIEAGPCVVTQLKTVEKDGYKAVQLGFGEAKEKRTSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F     +PKK L EF+ +++ +L   G   +   F+    VDV G++ GKGF G 
Sbjct: 63  PLMGTFKKAGTTPKKHLAEFKFEEEYNL---GDTITVDLFSNADFVDVVGVSKGKGFQGV 119

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ ++THG     R  GS G    P +VFK  +M G+MGG+RVT +NL V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLRVLKV 179

Query: 183 DDKRGLILVKGCVPG 197
             ++ L++VKG   G
Sbjct: 180 IPEQNLLIVKGSFAG 194


>gi|126022788|ref|NP_043617.2| ribosomal protein L3 [Odontella sinensis]
 gi|125987859|sp|P49569|RK3_ODOSI RecName: Full=50S ribosomal protein L3, chloroplastic
          Length = 207

 Score =  145 bits (365), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 80/201 (39%), Positives = 115/201 (57%), Gaps = 2/201 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT +++  G  IPVT+L +  C +   +T   +GY A+Q+G G    K+
Sbjct: 1   MSLGLLGNKIGMTQIFDESGNIIPVTILKVGPCVITQVKTDLNDGYNAIQIGYGTVSNKS 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G     N+ P K L EFRV   ++   VG V +    + GQ +DVTG + GKGF
Sbjct: 61  LTQPELGHLQKSNIQPLKYLKEFRVNNPEE-FKVGQVVNVESLSTGQFIDVTGKSSGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRHNF     THG S +HR+ GS G    PGRV   KKMAG++G      K L+++
Sbjct: 120 SGLQKRHNFTRGPMTHG-SKNHRAPGSIGMGTTPGRVLPGKKMAGQLGNKVTKTKKLKII 178

Query: 181 SVDDKRGLILVKGCVPGAKKN 201
            V+    +++VKG VPG   N
Sbjct: 179 QVNGNENILVVKGSVPGKPGN 199


>gi|237718743|ref|ZP_04549224.1| 50S ribosomal protein L3 [Bacteroides sp. 2_2_4]
 gi|229451875|gb|EEO57666.1| 50S ribosomal protein L3 [Bacteroides sp. 2_2_4]
          Length = 195

 Score =  145 bits (365), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 80/197 (40%), Positives = 118/197 (59%), Gaps = 4/197 (2%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +KP+ G F  
Sbjct: 1   MTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTKPLMGHFKR 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             V+PK+ L EF+    +  L +G   +   F     VDV G + GKGF G +KRH FGG
Sbjct: 61  AGVTPKRHLAEFKEFGTE--LNLGDTITVEMFNDANFVDVVGTSKGKGFQGVVKRHGFGG 118

Query: 132 L-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
           + +ATHG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V     L+L
Sbjct: 119 VGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKVIADHNLLL 178

Query: 191 VKGCVPGAKKNSWILVR 207
           +KG +PG  K S +L+ 
Sbjct: 179 IKGSIPGC-KGSIVLIE 194


>gi|23097574|ref|NP_691040.1| 50S ribosomal protein L3 [Oceanobacillus iheyensis HTE831]
 gi|42559644|sp|Q8ETY2|RL3_OCEIH RecName: Full=50S ribosomal protein L3
 gi|22775797|dbj|BAC12075.1| 50S ribosomal protein L3 [Oceanobacillus iheyensis HTE831]
          Length = 209

 Score =  145 bits (365), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 85/211 (40%), Positives = 124/211 (58%), Gaps = 4/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT +++  G  IPVTV+  +   V+  +TL+ +GY A+Q+G  + K   
Sbjct: 1   MTKGILGRKIGMTQLFSDNGELIPVTVIQAEPNVVLQKKTLENDGYEALQIGFADKKESR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +K  +G       +PK+ + E R   + +   VG       F  G+ +DVTG + GKGF
Sbjct: 61  TNKAEKGHAEKAGTAPKRYVREIR-GAEVNSFEVGQEIKVDIFESGEKIDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       THG S  HR+ G+ G   DP RVFK KK+ G MG  +VT++NLEVV
Sbjct: 120 QGVIKRHGQQRGPTTHG-SHFHRAPGAMGVI-DPMRVFKGKKLPGHMGSEQVTIQNLEVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           SVD  + L+L+KG VPGAKK S++ +  + K
Sbjct: 178 SVDTDKNLLLIKGNVPGAKK-SYVKITSAVK 207


>gi|229917358|ref|YP_002886004.1| 50S ribosomal protein L3 [Exiguobacterium sp. AT1b]
 gi|259646546|sp|C4KZP6|RL3_EXISA RecName: Full=50S ribosomal protein L3
 gi|229468787|gb|ACQ70559.1| ribosomal protein L3 [Exiguobacterium sp. AT1b]
          Length = 208

 Score =  145 bits (365), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 93/214 (43%), Positives = 129/214 (60%), Gaps = 9/214 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT ++N  G  +PVTV+ ++   V+  +T+D +GY AVQ+G G+ K   
Sbjct: 1   MAKGILGTKLGMTQIFNEAGEVVPVTVVAVEGNVVLQLKTVDTDGYEAVQLGFGDIKESR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + E R   +     +G       F  G+LVDVTG + GKGF
Sbjct: 61  QNKPSKGHAAKANATPKRFIKEVRTSVEG--YEIGQEIKADIFAAGELVDVTGTSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    P RVFK K + G+MGG R T++NLEVV
Sbjct: 119 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGQMGGERKTIQNLEVV 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            VD +RGL+LVKG +PGA+K++ I+     KSAV
Sbjct: 177 KVDVERGLLLVKGAIPGARKSNVII-----KSAV 205


>gi|149371629|ref|ZP_01891045.1| 50S ribosomal protein L3 [unidentified eubacterium SCB49]
 gi|149355256|gb|EDM43816.1| 50S ribosomal protein L3 [unidentified eubacterium SCB49]
          Length = 203

 Score =  144 bits (364), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 81/206 (39%), Positives = 122/206 (59%), Gaps = 6/206 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ RK+GMT +++  G+ +P TV+    C V   RT + +GY A+Q+G  + K   V+
Sbjct: 2   SGLIGRKIGMTSIFDENGKNLPCTVIECGPCVVTQVRTEEVDGYAALQLGFDDKKA--VN 59

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G         K+K+ EF+    D+   +G   +  +F  G  VDV G + GKGF G
Sbjct: 60  KAAEGHAKKAGTVAKRKVVEFK--GFDEEYKLGDTITVEHFAEGDFVDVAGTSKGKGFQG 117

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG+ +ATHG     R+ GS G    P RVFK  +MAG+MG  +V V+NL V+ 
Sbjct: 118 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGQMGNEKVKVQNLRVLK 177

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L++VKGCVPG  KN+++ ++
Sbjct: 178 VVAEKNLLVVKGCVPG-HKNAYVTIQ 202


>gi|307565148|ref|ZP_07627656.1| 50S ribosomal protein L3 [Prevotella amnii CRIS 21A-A]
 gi|307346179|gb|EFN91508.1| 50S ribosomal protein L3 [Prevotella amnii CRIS 21A-A]
          Length = 204

 Score =  144 bits (364), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 84/205 (40%), Positives = 127/205 (61%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G GEAK K  SK
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F     +PKK L EF+  ++ +L   G   +   F   + VDV G + GKGF G 
Sbjct: 63  PLQGHFKKAGTTPKKHLAEFKFDEEYNL---GDTITVELFNDTKYVDVVGTSKGKGFQGV 119

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ ++THG     R  GS G    P +VFK  +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  ++LVKG V G   ++ I+ +
Sbjct: 180 IPEHNILLVKGSVAGCNGSTVIIEK 204


>gi|319789238|ref|YP_004150871.1| 50S ribosomal protein L3 [Thermovibrio ammonificans HB-1]
 gi|317113740|gb|ADU96230.1| 50S ribosomal protein L3 [Thermovibrio ammonificans HB-1]
          Length = 207

 Score =  144 bits (364), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 85/206 (41%), Positives = 120/206 (58%), Gaps = 5/206 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--VKNV 61
           G++ RK+GMT V+  +G+ I VTV+    C VV  +T +++GY A+Q+G  E        
Sbjct: 3   GILGRKVGMTQVFTEDGKAIAVTVIEAGPCTVVQKKTPERDGYSALQLGFIEKNKAESKF 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP+ G F    + P + L E +    ++   VG   +   F  G+ VDVTG + G+GF+
Sbjct: 63  PKPLLGHFKKAGIKPTRWLKEVKFDNVEEYA-VGDKITVDIFKPGEKVDVTGTSKGRGFA 121

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G  KRH FGG R +HG S  H   GS G   DPGRV K K+MAG  G   VTVKNLE+V 
Sbjct: 122 GYHKRHGFGGGRRSHG-SDFHEGPGSIGACADPGRVHKGKRMAGHYGNETVTVKNLEIVD 180

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L+L+KG +PG  K S ++V+
Sbjct: 181 VIPEKNLLLIKGAIPG-HKGSLVIVK 205


>gi|189501654|ref|YP_001957371.1| 50S ribosomal protein L3 [Candidatus Amoebophilus asiaticus 5a2]
 gi|226725126|sp|B3EUM3|RL3_AMOA5 RecName: Full=50S ribosomal protein L3
 gi|189497095|gb|ACE05642.1| hypothetical protein Aasi_0197 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 210

 Score =  144 bits (364), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 78/208 (37%), Positives = 121/208 (58%), Gaps = 5/208 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT +Y+  GR +P TV+    C V   + ++K+GY AVQ+G  + K KN  K
Sbjct: 3   GIIGKKLGMTTLYDEAGRSVPCTVITGGPCVVTQIKNIEKDGYTAVQLGYDDKKEKNTVK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRV--QKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKGF 120
           P+ G F     +PK+KL EF+   ++    + +G        F  G+ VD  G++ GKGF
Sbjct: 63  PLMGHFQKAQTTPKRKLVEFKEFGKELGKEIQLGQTIQLHDIFVEGEYVDAIGLSKGKGF 122

Query: 121 SGAMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            G +KRH F G+   +HG     R+ G+ G    P RVFK  +MAGR GG RV + NL +
Sbjct: 123 QGVVKRHGFSGVGGKSHGQHNRERAPGAIGACSTPSRVFKGMRMAGRTGGQRVKITNLRI 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVR 207
           + +  ++ ++++ G VPGA KN +I++ 
Sbjct: 183 MKLVPEKNILVISGSVPGA-KNGYIILE 209


>gi|269101057|ref|YP_003289205.1| 50S ribosomal protein L3 [Ectocarpus siliculosus]
 gi|266631565|emb|CAV31236.1| Chloroplast 50S ribosomal protein L3 [Ectocarpus siliculosus]
 gi|270118695|emb|CAT18766.1| Chloroplast 50S ribosomal protein L3 [Ectocarpus siliculosus]
          Length = 207

 Score =  144 bits (364), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 81/201 (40%), Positives = 114/201 (56%), Gaps = 2/201 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+   K+GMT +++  G  +PVTV+ +  C +   +T   NGY A+Q+G  +     
Sbjct: 1   MSIGIFGNKIGMTQIFDKNGLALPVTVVSVGPCFITQLKTEKTNGYDAIQIGYSKGHTSK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK   G      +SP   L E+RV  D     +G + +   F VGQ V+VTG +IGKGF
Sbjct: 61  FSKAELGHLEKNGLSPLYHLCEYRVN-DLKNYSLGQILTVDNFQVGQFVNVTGKSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRH F     THG S +HR+ GS G    PGRVF  K MAG++G  ++TV  LE++
Sbjct: 120 SGNQKRHKFKRGPMTHG-SKNHRAPGSIGPGTTPGRVFPGKLMAGQLGAKKITVSKLEIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKN 201
            +D K+ L+++KG VPG   N
Sbjct: 179 GIDSKQNLLILKGSVPGKPGN 199


>gi|303328094|ref|ZP_07358533.1| 50S ribosomal protein L3 [Desulfovibrio sp. 3_1_syn3]
 gi|302861920|gb|EFL84855.1| 50S ribosomal protein L3 [Desulfovibrio sp. 3_1_syn3]
          Length = 209

 Score =  144 bits (364), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 83/206 (40%), Positives = 117/206 (56%), Gaps = 2/206 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           + G++ RKLGMT ++  +G  + VTV+    C V   +T++K+GY A+Q+   EAK K+V
Sbjct: 4   KMGILGRKLGMTRIFAGDGAAVAVTVIEAGPCPVTQVKTVEKDGYNALQIALTEAKEKHV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            K MRG F+       +   E R+    +  P G   +   F  G +V VTG ++GKG+ 
Sbjct: 64  GKAMRGHFAKAGTGLFRHTREIRLSGAPEQQP-GQQLTVDIFAAGDVVKVTGKSMGKGYQ 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G M+R NF G + THG    HR++GS G    PG VFK +KMAG  G   VT   L +V 
Sbjct: 123 GRMRRWNFAGSKDTHGCEKVHRNNGSVGNNTFPGHVFKGRKMAGHWGNETVTEMGLLIVG 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  +  +ILVKG VPG  KN  +L+R
Sbjct: 183 VRPEDNVILVKGSVPGP-KNGLVLIR 207


>gi|89100349|ref|ZP_01173214.1| 50S ribosomal protein L3 [Bacillus sp. NRRL B-14911]
 gi|89084970|gb|EAR64106.1| 50S ribosomal protein L3 [Bacillus sp. NRRL B-14911]
          Length = 208

 Score =  144 bits (363), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 85/200 (42%), Positives = 121/200 (60%), Gaps = 3/200 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +++D +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVVEATGNVVLQVKSVDTDGYEAIQLGFEDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  + +PK+ + EFR   D     VG       F  G  VDVTG++ GKGF
Sbjct: 61  SNKPEQGHVAKADTAPKRFVREFR-GVDLAAYEVGQEVKVDIFAEGDTVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G++KRH       +HG S  HR  GS G    P RVFK K + GRMGG+++TV+NLE+V
Sbjct: 120 QGSIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKALPGRMGGDQITVQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKK 200
            +D +R L+L+KG VPGAKK
Sbjct: 178 KIDAERNLLLIKGNVPGAKK 197


>gi|139438580|ref|ZP_01772096.1| Hypothetical protein COLAER_01094 [Collinsella aerofaciens ATCC
           25986]
 gi|133776119|gb|EBA39939.1| Hypothetical protein COLAER_01094 [Collinsella aerofaciens ATCC
           25986]
          Length = 203

 Score =  144 bits (363), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 93/205 (45%), Positives = 122/205 (59%), Gaps = 7/205 (3%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RK+GMT V++ +   +PVTV+    C V   +T   +GY AVQ+G G+ K KNV+KP
Sbjct: 2   ILGRKIGMTQVWDEDDNVVPVTVIQAGPCAVSQVKTQATDGYDAVQIGFGDIKAKNVNKP 61

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M G F+   V P + L E RV+  ++   VG V + + F   + VDV G + GKGF G +
Sbjct: 62  MAGHFAKAGVEPVRFLREVRVENGEE-HKVGEVVTVADFADVEKVDVIGTSKGKGFQGRI 120

Query: 125 KRHNFGGLRA--THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           KR  +G  R   THG S   R  GS G    P RV K  KMAG MG  RVTVKNL VV +
Sbjct: 121 KR--WGQRRGPMTHG-SHFQRHPGSIGQCAYPARVLKGVKMAGHMGNERVTVKNLSVVRI 177

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
           D ++ LILVKG VPGA KN  + +R
Sbjct: 178 DAEQNLILVKGAVPGA-KNGLVAIR 201


>gi|282858374|ref|ZP_06267554.1| 50S ribosomal protein L3 [Prevotella bivia JCVIHMP010]
 gi|282588822|gb|EFB93947.1| 50S ribosomal protein L3 [Prevotella bivia JCVIHMP010]
          Length = 204

 Score =  144 bits (363), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 84/205 (40%), Positives = 126/205 (61%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G GEAK K  SK
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G F     +PKK L EF+  ++ +L   G   +   F   + VDV G + GKGF G 
Sbjct: 63  PQQGHFKKAGTTPKKHLAEFKFDEEYNL---GDTITVELFNDTKFVDVVGTSKGKGFQGV 119

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ ++THG     R  GS G    P +VFK  +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  ++LVKG V G   ++ I+ +
Sbjct: 180 IPEHNILLVKGSVAGCNGSTVIIEK 204


>gi|290968244|ref|ZP_06559787.1| 50S ribosomal protein L3 [Megasphaera genomosp. type_1 str. 28L]
 gi|290781726|gb|EFD94311.1| 50S ribosomal protein L3 [Megasphaera genomosp. type_1 str. 28L]
          Length = 212

 Score =  144 bits (363), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 92/213 (43%), Positives = 128/213 (60%), Gaps = 5/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ +KLGMT ++  EG  +PVTV+      VV  +T+D +GY ++Q+G GE K K+
Sbjct: 1   MSKAILGKKLGMTQIFTEEGAVVPVTVVEASPNVVVRVKTVDTDGYNSIQIGYGEVKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP++G F+   V+P K L E R+  D     VG   +   F  G LVDV G   GKGF
Sbjct: 61  LTKPVKGQFAKAGVNPVKYLRELRLT-DTPEYTVGQTLAADIFASGDLVDVIGTGKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTG--CRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KRH F      HG S SHR  GS G       G+V K KK+ G+MGGN+ TV +L 
Sbjct: 120 AGTIKRHGFHRGPMGHG-SKSHREPGSLGPMISGGGGKVVKGKKLPGQMGGNQATVLHLS 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           VV VD  + LIL+KG +PGA K S +++RD+ K
Sbjct: 179 VVKVDMDKNLILIKGGIPGA-KGSLVMIRDTVK 210


>gi|301059231|ref|ZP_07200168.1| 50S ribosomal protein L3 [delta proteobacterium NaphS2]
 gi|300446666|gb|EFK10494.1| 50S ribosomal protein L3 [delta proteobacterium NaphS2]
          Length = 207

 Score =  144 bits (363), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 117/209 (55%), Gaps = 2/209 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M + +  +K+GMT  +   G+  PVTV+ +  C V   +T++K GY A+Q+G G    K 
Sbjct: 1   MVNKLFGKKIGMTRYFLEGGKSEPVTVVKIAPCVVTQKKTVEKEGYNAIQIGFGPKDEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP++G F +        L E +V  D D   +G       F +G  V V G + G+GF
Sbjct: 61  TNKPLKGHFEASGGKCFAYLNEVKVD-DVDAFELGQEIKSDVFAIGDTVHVRGRSKGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR  FGG R THG S SHR  GS GC  DP RV K +KM GRMG   VT KNL+VV
Sbjct: 120 AGVMKRWGFGGGRKTHG-SRSHRVPGSIGCSADPARVVKGRKMPGRMGNTHVTTKNLKVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            +     ++L+KG VPGA+ N   + + S
Sbjct: 179 DIRPDMDILLLKGPVPGARGNLLEIFKAS 207


>gi|308233852|ref|ZP_07664589.1| LSU ribosomal protein L3P [Atopobium vaginae DSM 15829]
 gi|328943560|ref|ZP_08241025.1| 50S ribosomal protein L3 [Atopobium vaginae DSM 15829]
 gi|327491529|gb|EGF23303.1| 50S ribosomal protein L3 [Atopobium vaginae DSM 15829]
          Length = 206

 Score =  144 bits (363), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 88/207 (42%), Positives = 121/207 (58%), Gaps = 3/207 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M + ++ RK+GMT V++     +PVTV+    C V   +T   +GY AVQ+G G+ K K+
Sbjct: 1   MVTTILGRKIGMTQVWDENDNIVPVTVIQAGPCTVSQVKTKATDGYDAVQIGFGDIKAKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP+ G F + NV P + L E RV+  +D    G V +   F     VDV G + GKGF
Sbjct: 61  VNKPLAGHFKAHNVEPARYLAEVRVENGED-HKCGDVVTVKDFADVAAVDVIGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF      HG S + R  GS G    P RV K   MAG MG  RVTVKNL++V
Sbjct: 120 QGTIKRWNFSCGPKAHG-SRNQREPGSIGQCSYPARVRKGLHMAGHMGDERVTVKNLKLV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207
            +D+++ L+LVKG VPG  KN+ + +R
Sbjct: 179 RIDEEQNLMLVKGAVPGG-KNALVSIR 204


>gi|113476579|ref|YP_722640.1| 50S ribosomal protein L3 [Trichodesmium erythraeum IMS101]
 gi|123056500|sp|Q110A7|RL3_TRIEI RecName: Full=50S ribosomal protein L3
 gi|110167627|gb|ABG52167.1| LSU ribosomal protein L3P [Trichodesmium erythraeum IMS101]
          Length = 227

 Score =  144 bits (363), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 117/212 (55%), Gaps = 17/212 (8%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT V+  E G+ IPVTV+    C V   +T   +GY AVQ+G GEAK K
Sbjct: 1   MVVGILGTKLGMTQVFEAETGKAIPVTVVEAGPCVVTQIKTEQTDGYTAVQIGYGEAKNK 60

Query: 60  ----NVSKP----------MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105
               N  +P            G       +P + L E+RV    +   +G       F  
Sbjct: 61  TRQLNTKEPKEVNRYLTNAQEGHLVKSGGTPLRYLREYRVDNTGNF-ELGQQIKVDLFEA 119

Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
           GQLVDVTG +IGKGF+G  KRHNF      HG S +HR  GSTG    PGRV+  KKMAG
Sbjct: 120 GQLVDVTGKSIGKGFAGYQKRHNFRRGPMAHG-SKNHRLPGSTGPGTTPGRVYPGKKMAG 178

Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197
            +G  RVT + L++V +D +R L+L+KG +PG
Sbjct: 179 HLGNVRVTTRKLKIVRIDPERNLLLIKGSIPG 210


>gi|11467343|ref|NP_043200.1| ribosomal protein L3 [Cyanophora paradoxa]
 gi|132953|sp|P15766|RK3_CYAPA RecName: Full=50S ribosomal protein L3, cyanelle
 gi|1016144|gb|AAA81231.1| ribosomal protein L3 [Cyanophora paradoxa]
 gi|13513069|emb|CAC35457.1| L3 ribosomal protein [Cyanophora paradoxa]
          Length = 209

 Score =  144 bits (363), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 77/197 (39%), Positives = 114/197 (57%), Gaps = 2/197 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT +++  G  IPVT++    C +   +T   +GY A+QVG  E K KN
Sbjct: 1   MSIGILGTKLGMTQIFDEAGNAIPVTIIQAGPCPITQIKTTATDGYNAIQVGYRETKEKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++K   G     N S  + L EF ++  D  + V    +   F    +V++ G +IG+GF
Sbjct: 61  LTKAQLGHLQKTNNSALRVLQEFSIESSDS-IEVEKPITVELFNDNDIVNIQGYSIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRHNF     +HG S +HR  GS G    PGRV+   +MAGR G +++T++ L++V
Sbjct: 120 SGYQKRHNFARGPMSHG-SKNHRLPGSIGAGSTPGRVYPGTRMAGRKGDSKITIRGLKIV 178

Query: 181 SVDDKRGLILVKGCVPG 197
            VD +R L++VKG VPG
Sbjct: 179 KVDSERSLLIVKGSVPG 195


>gi|320160414|ref|YP_004173638.1| 50S ribosomal protein L3 [Anaerolinea thermophila UNI-1]
 gi|319994267|dbj|BAJ63038.1| 50S ribosomal protein L3 [Anaerolinea thermophila UNI-1]
          Length = 209

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/212 (40%), Positives = 123/212 (58%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT +++  G  IPVTV+    C V   RT + +GY AVQ+G  E K K 
Sbjct: 1   MLKGLIGKKIGMTQIFDENGVAIPVTVIEAGPCYVTQVRTPENDGYSAVQLGFEEVKPKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++    G     N+ P + L EFRV+  +  +  G   +   F VG+ VDV G + GKGF
Sbjct: 61  LTGGELGHLKRNNLPPLRFLREFRVKNPE--VKEGDKVTVECFAVGERVDVVGTSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR++F G   THG S  HR+ GS      PGRV+K  +  G MG +RVT + L+VV
Sbjct: 119 QGGVKRYHFRGGPKTHGQSDRHRAPGSRSSGTTPGRVYKGSRGPGHMGNDRVTAQGLKVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R LI VKG VPGA K   ++++++ K 
Sbjct: 179 LVDTERNLIGVKGSVPGA-KGGLVVIKEARKQ 209


>gi|302336382|ref|YP_003801589.1| LSU ribosomal protein L3P [Olsenella uli DSM 7084]
 gi|301320222|gb|ADK68709.1| LSU ribosomal protein L3P [Olsenella uli DSM 7084]
          Length = 206

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/207 (43%), Positives = 122/207 (58%), Gaps = 3/207 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M S ++ RK+GMT V++ +   +PVTV+    C V   +T   +GY AVQ+G G+   K+
Sbjct: 1   MVSTILGRKIGMTQVWDEDDNVVPVTVIQAGPCTVSQVKTKATDGYDAVQIGFGDITAKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM G F+   V P + L E RV+ D +    G   S + F   + VDVTG + GKGF
Sbjct: 61  VNKPMAGHFAKAGVEPMRYLREVRVE-DGEEHSCGDQVSVADFAEVKSVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF     THG S + R  GS G    P RV K   MAG MG  RVTVKNL++V
Sbjct: 120 QGTIKRWNFSRGPMTHG-SRNQRKPGSIGQCAYPARVRKGLHMAGHMGDERVTVKNLKLV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207
            VD ++ L+LVKG VPG  KN+ + +R
Sbjct: 179 RVDVEQNLMLVKGAVPGG-KNALVSIR 204


>gi|332182016|gb|AEE17704.1| 50S ribosomal protein L3 [Treponema brennaborense DSM 12168]
          Length = 206

 Score =  144 bits (362), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/211 (43%), Positives = 123/211 (58%), Gaps = 9/211 (4%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++A K+GMT V++ +G   PVTV+ +D   VV  +T +  GY AV +G G+ K   +SK
Sbjct: 3   GLIATKVGMTQVFDEDGNLTPVTVIRVDPNVVVACKTKETFGYDAVVLGLGDLKNSQISK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    ++PK+ L EFR   ++  + VG       F     VDVT  + GKGF G 
Sbjct: 63  PYAGQFPE-GITPKRHLKEFRDFSNE--VAVGDQIGVELFENTNYVDVTATSKGKGFQGV 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR  F G RATHG S  HR  GSTG    PG  FKN KM G MG  R+TV+NL+V+ VD
Sbjct: 120 MKRWGFHGGRATHG-SKFHREAGSTGQCTSPGHSFKNIKMPGHMGCERITVQNLKVIKVD 178

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            +  +++V+G VPG K  + I+     KSAV
Sbjct: 179 PELKVVMVRGSVPGNKDCTLII-----KSAV 204


>gi|42561270|ref|NP_975721.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|81829359|sp|Q6MSM6|RL3_MYCMS RecName: Full=50S ribosomal protein L3
 gi|42492768|emb|CAE77363.1| 50S RIBOSOMAL PROTEIN L3 [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|301320560|gb|ADK69203.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. mycoides SC
           str. Gladysdale]
          Length = 223

 Score =  144 bits (362), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/209 (39%), Positives = 131/209 (62%), Gaps = 8/209 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+ MT V+   G+ +PVTV+ +    V+  +T+D +GY+AVQ+G  + +V  V+K
Sbjct: 3   GILGRKVEMTQVFTSAGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLVNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSG 122
           P  G F   N +PK+ + E R  +  +L   G V + S  F  G+ VDVTG++ GKGF+G
Sbjct: 63  PELGHFKKANSNPKRFVKEIRNMQGYEL---GQVINVSDIFVSGEYVDVTGISKGKGFAG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHN+      HG S  HR  GS G   +  R+FK+KKM G MG  + T++NLE++++
Sbjct: 120 GIKRHNYARGPMAHG-SGYHRGIGSMGAIIN--RIFKSKKMPGHMGNAKRTIQNLEIIAI 176

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D    ++L+KG +PG+ KNS++ ++ + K
Sbjct: 177 DQPNNIMLIKGSIPGS-KNSFVQIKQNIK 204


>gi|46579714|ref|YP_010522.1| 50S ribosomal protein L3 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120602809|ref|YP_967209.1| 50S ribosomal protein L3 [Desulfovibrio vulgaris DP4]
 gi|81830454|sp|Q72CI0|RL3_DESVH RecName: Full=50S ribosomal protein L3
 gi|166233138|sp|A1VEB6|RL3_DESVV RecName: Full=50S ribosomal protein L3
 gi|46449129|gb|AAS95781.1| ribosomal protein L3 [Desulfovibrio vulgaris str. Hildenborough]
 gi|120563038|gb|ABM28782.1| LSU ribosomal protein L3P [Desulfovibrio vulgaris DP4]
 gi|311233505|gb|ADP86359.1| 50S ribosomal protein L3 [Desulfovibrio vulgaris RCH1]
          Length = 209

 Score =  144 bits (362), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/206 (41%), Positives = 117/206 (56%), Gaps = 2/206 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           + G++ RK+G+T ++  +G  + VTV+    C V   +T+  +GY A+Q+   EAK K++
Sbjct: 4   KMGILGRKIGVTRIFASDGSAVAVTVIKAGPCPVTQVKTVATDGYDAIQIAFDEAKEKHL 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G  +       + L E R++       VGS    + F  G  V V+G +IGKG+ 
Sbjct: 64  NKPEIGHLAKAGKGLFRTLREIRLEAPA-AYEVGSELDVTLFATGDRVKVSGTSIGKGYQ 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G M+R NF G + THG    HRS GS G    PG VFK KKMAG  G   VTV NLEVV 
Sbjct: 123 GVMRRWNFAGSKDTHGCEKVHRSGGSIGNNTFPGHVFKGKKMAGHWGNESVTVLNLEVVD 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  +  +ILVKG VPG  KN  ++VR
Sbjct: 183 VRPEDNVILVKGSVPGP-KNGLVMVR 207


>gi|325856043|ref|ZP_08171932.1| 50S ribosomal protein L3 [Prevotella denticola CRIS 18C-A]
 gi|327313190|ref|YP_004328627.1| 50S ribosomal protein L3 [Prevotella denticola F0289]
 gi|325483715|gb|EGC86679.1| 50S ribosomal protein L3 [Prevotella denticola CRIS 18C-A]
 gi|326944923|gb|AEA20808.1| 50S ribosomal protein L3 [Prevotella denticola F0289]
          Length = 204

 Score =  144 bits (362), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/205 (41%), Positives = 125/205 (60%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G GEAK K  SK
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKTVEKDGYKAVQLGFGEAKEKRTSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F     +PKK L EF+  ++ +L   G   +   F   + VDV G + GKGF G 
Sbjct: 63  PQLGHFKKAGTTPKKHLAEFKFDEEYNL---GDTITVELFNDTKFVDVVGTSKGKGFQGV 119

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ ++THG     R  GS G    P +VFK  +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  L+LVKG V G   ++ I+ +
Sbjct: 180 IPEHNLLLVKGSVAGCNGSTVIISK 204


>gi|121603120|ref|YP_980449.1| 50S ribosomal protein L3 [Polaromonas naphthalenivorans CJ2]
 gi|166233174|sp|A1VIQ0|RL3_POLNA RecName: Full=50S ribosomal protein L3
 gi|120592089|gb|ABM35528.1| LSU ribosomal protein L3P [Polaromonas naphthalenivorans CJ2]
          Length = 226

 Score =  144 bits (362), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/211 (41%), Positives = 125/211 (59%), Gaps = 3/211 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  +PVTV+ + N +V   +T   +GY A+QV  G  K   V+K
Sbjct: 8   GLLGRKVGMMRLFTDDGDTVPVTVVDVSNNRVTQVKTEANDGYDALQVAFGSRKASRVTK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVF-SPSYFTVGQLVDVTGMTIGKGFS 121
           P  G  +   V   + L EFRV  D       G+V  +   F VGQLVDV G +IGKGF+
Sbjct: 68  PEAGHLAKAGVEAGEILKEFRVTADVAGKYAAGTVVPAADIFAVGQLVDVQGTSIGKGFA 127

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRH     RA+HG S SH   GS G  QDPGRVF  K+M G +G    T +NL++V 
Sbjct: 128 GTIKRHKMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTKTTQNLDIVR 187

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +D+ R L++++G VPG+ K  ++ VR + K+
Sbjct: 188 IDEARQLLMIRGAVPGS-KGGFVTVRAAIKA 217


>gi|205372069|ref|ZP_03224886.1| 50S ribosomal protein L3 [Bacillus coahuilensis m4-4]
          Length = 209

 Score =  143 bits (361), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T D +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTADTDGYSAIQLGFEDMRAKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP  G  +    +PK+ + E R   +     VG       F  G +VDVTG++ GKGF
Sbjct: 61  ANKPRTGHAAKAETAPKRFIREIR-DANVAEYEVGQEVKVDTFAAGDVVDVTGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH       +HG S  HR  GS G    P RVFK K + GRMGG+ VTV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGDIVTVQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGAKK + + V+ + K+
Sbjct: 178 KVDVERNLLLVKGNVPGAKK-ALVKVQSAVKA 208


>gi|286142754|gb|ADC41407.1| ribosomal protein L3 [Streptomyces sp. CB169]
 gi|286142756|gb|ADC41408.1| ribosomal protein L3 [Streptomyces sp. CB170]
          Length = 167

 Score =  143 bits (361), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 77/167 (46%), Positives = 101/167 (60%), Gaps = 1/167 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+    C V   RT D +GY +VQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNFGGL
Sbjct: 61  DVTPRRHLVEIRTS-DASEYTLGQELTAETFESGVKVDVTGKSKGKGFAGVMKRHNFGGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            ++HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V
Sbjct: 120 GSSHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTV 166


>gi|256827416|ref|YP_003151375.1| 50S ribosomal protein L3P [Cryptobacterium curtum DSM 15641]
 gi|256583559|gb|ACU94693.1| LSU ribosomal protein L3P [Cryptobacterium curtum DSM 15641]
          Length = 206

 Score =  143 bits (361), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/207 (41%), Positives = 122/207 (58%), Gaps = 3/207 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M + +   KLGMT +++ +   +PVTV+      +   +T + +GY AVQ+G G  K + 
Sbjct: 1   MINAIYGTKLGMTQIFSEDDEVVPVTVIQAAPNTICQLKTKETDGYEAVQLGFGAIKPQK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++PM G F+   V P + L E RV+ D     +G   + S F   + VDVT  + GKGF
Sbjct: 61  VNRPMGGHFAKQGVDPVRHLREVRVE-DASAHSLGEKVTVSLFADAKKVDVTATSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G M+R+NF G    HG    HR+ GS G    P RVFK  ++ G MG + VTVKNL+VV
Sbjct: 120 AGVMRRYNFRGGPGGHGAHF-HRAPGSVGMCATPSRVFKGLRLPGHMGVDTVTVKNLDVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207
            +D+++ LILVKG VPG  KN+ + VR
Sbjct: 179 RIDEEQNLILVKGAVPGG-KNAMVRVR 204


>gi|254442313|ref|ZP_05055789.1| ribosomal protein L3 [Verrucomicrobiae bacterium DG1235]
 gi|198256621|gb|EDY80929.1| ribosomal protein L3 [Verrucomicrobiae bacterium DG1235]
          Length = 201

 Score =  143 bits (361), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/202 (43%), Positives = 121/202 (59%), Gaps = 4/202 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT VY  + + +PVTVL    C V+  +T++ +GY A+Q+G    K KN SK   G    
Sbjct: 1   MTQVYGSDNQVVPVTVLQAGPCPVLQVKTVESDGYNAIQIGFDSKKDKNASKAAIGHAKK 60

Query: 72  VNVSPKKKLF-EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
             V+   ++  E R  +  D    G V   S F VG+ VDV G T GKGF+G MKR N  
Sbjct: 61  AGVAHAPRVIREVRSPEAIDAT-AGDVLDVSKFEVGKKVDVIGNTKGKGFAGVMKRFNTK 119

Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
           G  A+HG S+ HR  GS G  Q PG VFKN+KM G MG  + T++NLE+VS+D ++ LIL
Sbjct: 120 GGPASHG-SMFHRRIGSIGLCQWPGHVFKNQKMPGHMGAKQRTIQNLEIVSIDAEKNLIL 178

Query: 191 VKGCVPGAKKNSWILVRDSFKS 212
           VKG +PGA  ++ +++R + K+
Sbjct: 179 VKGGIPGANGDT-VMIRSAIKA 199


>gi|258648159|ref|ZP_05735628.1| 50S ribosomal protein L3 [Prevotella tannerae ATCC 51259]
 gi|260852040|gb|EEX71909.1| 50S ribosomal protein L3 [Prevotella tannerae ATCC 51259]
          Length = 206

 Score =  143 bits (361), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/209 (39%), Positives = 121/209 (57%), Gaps = 10/209 (4%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ IP TV+ +  C V   ++++K GY AVQ+G  EAK KN + 
Sbjct: 3   GLLGKKIGMTSVFSADGKNIPCTVVEVGPCVVTQIKSVEKEGYNAVQLGFQEAKEKNTTA 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDD----DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           P+ G F     +PK+ L EF     +    D + V  VF    +     VDV G + G G
Sbjct: 63  PLLGHFKKAGTTPKRHLAEFTGFDKEFNLGDTITVADVFEGVEY-----VDVVGTSKGHG 117

Query: 120 FSGAMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           F G MKRH FGG+ ++THG     R  G+ G    P +VFK  +MAG+MG  R T +NL+
Sbjct: 118 FQGVMKRHGFGGVGQSTHGQDDRARKPGAIGACSYPAKVFKGMRMAGQMGNRRATNQNLK 177

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVR 207
           V+ V  +  L+L+KG VPG K +  I+ +
Sbjct: 178 VIKVIPEHNLLLLKGSVPGCKGSIVIIEK 206


>gi|323308966|gb|EGA62197.1| Mrpl9p [Saccharomyces cerevisiae FostersO]
          Length = 235

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 77/175 (44%), Positives = 106/175 (60%), Gaps = 2/175 (1%)

Query: 2   RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           R G++ RK GM   ++   G R   T+L ++N +V++HRT + NGY A QVG G   +  
Sbjct: 58  RCGLITRKKGMMPYFDKSTGERSAATILEVNNVEVIMHRTSEVNGYFACQVGYGSRHLSK 117

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF-TVGQLVDVTGMTIGKG 119
           VS+ M G F+S  V+PK+ + EFRV+ +  +     +    +F   GQ VDV  ++ GKG
Sbjct: 118 VSRQMLGHFASKVVNPKEHVAEFRVKDEKGINTTWHIIETVFFFKEGQYVDVRSVSKGKG 177

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           F+G MKR+ F GLRA+HG SI HR  GS G  QDPGRV   +KM G MG   VT+
Sbjct: 178 FTGVMKRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTI 232


>gi|317496190|ref|ZP_07954550.1| 50S ribosomal protein L3 [Gemella moribillum M424]
 gi|329770040|ref|ZP_08261435.1| 50S ribosomal protein L3 [Gemella sanguinis M325]
 gi|316913765|gb|EFV35251.1| 50S ribosomal protein L3 [Gemella moribillum M424]
 gi|328837351|gb|EGF86981.1| 50S ribosomal protein L3 [Gemella sanguinis M325]
          Length = 220

 Score =  143 bits (360), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/224 (41%), Positives = 127/224 (56%), Gaps = 18/224 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--- 57
           M  G++ RK+GMT ++   G  IPVTV+      V+  +T +  GY A+Q+G  + +   
Sbjct: 1   MTKGILGRKVGMTQIFAENGELIPVTVVEAKGNVVLQKKTEEVEGYNAIQLGFDDKRPYD 60

Query: 58  -------VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQL 108
                  VK  +KP +G     N +PK+ + E R   D D+    VG       F  G L
Sbjct: 61  KERKDRLVKVANKPEQGHADKANTAPKRFVREIR---DADVASYEVGQEVQVDIFAAGDL 117

Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
           VDVTG++ GKGF GA+KRH        HG S  HR  GS G    P RVFK K + G+MG
Sbjct: 118 VDVTGVSKGKGFQGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKALPGQMG 175

Query: 169 GNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           G  VT +NLE+VSVD + GLILVKGC+PG+KK S++ ++ + KS
Sbjct: 176 GVTVTTQNLEIVSVDVENGLILVKGCIPGSKK-SFVKIQSAVKS 218


>gi|256383913|gb|ACU78483.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|256384744|gb|ACU79313.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|296455991|gb|ADH22226.1| 50S ribosomal protein L3 [synthetic Mycoplasma mycoides
           JCVI-syn1.0]
          Length = 223

 Score =  143 bits (360), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/209 (39%), Positives = 130/209 (62%), Gaps = 8/209 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+ MT V+   G+ +PVTV+ +    V+  +T+D +GY+AVQ+G  + +V  V+K
Sbjct: 3   GILGRKVEMTQVFTSAGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLVNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSG 122
           P  G F   N +PK+ + E R  +  +L   G V + S  F  G+ VDVTG++ GKGF+G
Sbjct: 63  PELGHFKKANSNPKRFVKEIRNMQGYEL---GQVINVSDIFVSGEYVDVTGISKGKGFAG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHN+      HG S  HR  GS G   +  R+FK+KKM G MG  + T++NLE++++
Sbjct: 120 GIKRHNYARGPMAHG-SGYHRGIGSMGAIIN--RIFKSKKMPGHMGNAKRTIQNLEIIAI 176

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D    ++L+KG +PG  KNS++ ++ + K
Sbjct: 177 DQPNNIMLIKGSIPGP-KNSFVQIKQNIK 204


>gi|224477220|ref|YP_002634826.1| 50S ribosomal protein L3 [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254803691|sp|B9DM19|RL3_STACT RecName: Full=50S ribosomal protein L3
 gi|222421827|emb|CAL28641.1| 50S ribosomal protein L3 [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 220

 Score =  143 bits (360), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/219 (40%), Positives = 121/219 (55%), Gaps = 11/219 (5%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+QVG  + +   
Sbjct: 1   MTKGILGRKIGMTQVFGENGDLIPVTVVEAGQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60

Query: 59  ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
                 K  +KP  G       +PK+ + EF+   + D   VG   S   F  G ++DVT
Sbjct: 61  KDSKSNKYANKPAEGHAKKAGTAPKRFIREFK-NINVDEYEVGQEVSVDTFEAGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF G +KRH        HG S  HR+ GS G   D  +VFK  KM GRMGGN V
Sbjct: 120 GVSKGKGFQGNIKRHGHARGPMAHG-SHFHRAPGSVGMASDASKVFKGHKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           TV+NLEVV +D +  +ILVKG VPG KK   + ++ S K
Sbjct: 179 TVQNLEVVQIDAENNVILVKGNVPGPKK-GLVEIKTSIK 216


>gi|221488825|gb|EEE27039.1| 50S ribosomal protein L3, putative [Toxoplasma gondii GT1]
          Length = 514

 Score =  143 bits (360), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/199 (42%), Positives = 117/199 (58%), Gaps = 3/199 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K+GM  +++  G R  VTV  +D C V+  RTLDK+GY A  +G G   +  V
Sbjct: 256 RTGLLAYKIGMMSLWDGWGERHAVTVCQVDRCVVMDQRTLDKDGYEACVMGIGYKPIHKV 315

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KPM G +    + PK ++ EF+    D LLPVG   S  +FT GQ V V+G +  KG+ 
Sbjct: 316 TKPMLGVYIRSQIEPKSRIAEFKCS-SDCLLPVGHEMSVRHFTPGQQVFVSGWSKDKGYL 374

Query: 122 GAMKRHNFGGLRATHGVSI-SHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           G  KR  F G  A+HGV   +H S GS G  +    V++ KKMAG  GG+   V N +V 
Sbjct: 375 GVKKRWGFAGQNASHGVEAKAHSSPGSIGQSKTVNVVWRFKKMAGHAGGDPRVV-NCKVF 433

Query: 181 SVDDKRGLILVKGCVPGAK 199
            ++ +R LI +KGCVPG K
Sbjct: 434 RIEAQRNLIFLKGCVPGYK 452


>gi|256830538|ref|YP_003159266.1| ribosomal protein L3 [Desulfomicrobium baculatum DSM 4028]
 gi|256579714|gb|ACU90850.1| ribosomal protein L3 [Desulfomicrobium baculatum DSM 4028]
          Length = 210

 Score =  143 bits (360), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/202 (39%), Positives = 115/202 (56%), Gaps = 1/202 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT +Y  +G  IPVTV+    C V+  +  +K+GY A+QVG  E     ++K
Sbjct: 6   GIVGRKIGMTRIYGADGNVIPVTVIQAGPCPVIEKKVSEKDGYTAIQVGFEEVAAHRLTK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G     N    K L E R+   D+   +G   +   FT G+ + VTG + G+GF+G 
Sbjct: 66  PEQGHQQKANCGFYKMLKEIRLGSVDEY-EIGQKLTVEMFTPGEKIRVTGTSKGRGFAGV 124

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           ++R NF G  A+HG    HR  GS G    P +VFK KKM G++G    T+ NLE+V V 
Sbjct: 125 IRRWNFSGAPASHGHEKVHRKPGSIGQCAWPSKVFKGKKMPGQLGNKTATMLNLEIVDVR 184

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
            +  ++LV+G VPG K+   +L
Sbjct: 185 PEDNVVLVRGQVPGPKQGIVVL 206


>gi|331703716|ref|YP_004400403.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328802271|emb|CBW54425.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 223

 Score =  143 bits (360), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/209 (39%), Positives = 130/209 (62%), Gaps = 8/209 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+ MT V+   G+ +PVTV+ +    V+  +T+D +GY+AVQ+G  + +V  V+K
Sbjct: 3   GILGRKVEMTQVFTNSGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLVNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSG 122
           P  G F   N +PK+ + E R  +  +L   G V + S  F  G+ VDVTG++ GKGF+G
Sbjct: 63  PELGHFKKANSNPKRFVKEIRNMQGYEL---GQVINVSDIFVSGEYVDVTGISKGKGFAG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHN+      HG S  HR  GS G   +  R+FK+KKM G MG  + T++NLE++++
Sbjct: 120 GIKRHNYARGPMAHG-SGYHRGIGSMGAIIN--RIFKSKKMPGHMGNAKRTIQNLEIIAI 176

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D    ++L+KG +PG  KNS++ ++ + K
Sbjct: 177 DQPNNIMLIKGSIPGP-KNSFVQIKQNIK 204


>gi|237837257|ref|XP_002367926.1| ribosomal protein L3p, putative [Toxoplasma gondii ME49]
 gi|211965590|gb|EEB00786.1| ribosomal protein L3p, putative [Toxoplasma gondii ME49]
 gi|221509315|gb|EEE34884.1| 50S ribosomal protein L3, putative [Toxoplasma gondii VEG]
          Length = 514

 Score =  143 bits (360), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/199 (42%), Positives = 117/199 (58%), Gaps = 3/199 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K+GM  +++  G R  VTV  +D C V+  RTLDK+GY A  +G G   +  V
Sbjct: 256 RTGLLAYKIGMMSLWDGWGERHAVTVCQVDRCVVMDQRTLDKDGYEACVMGIGYKPIHKV 315

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KPM G +    + PK ++ EF+    D LLPVG   S  +FT GQ V V+G +  KG+ 
Sbjct: 316 TKPMLGVYIRSQIEPKSRIAEFKCS-SDCLLPVGHEMSVRHFTPGQQVFVSGWSKDKGYL 374

Query: 122 GAMKRHNFGGLRATHGVSI-SHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           G  KR  F G  A+HGV   +H S GS G  +    V++ KKMAG  GG+   V N +V 
Sbjct: 375 GVKKRWGFAGQNASHGVEAKAHSSPGSIGQSKTVNVVWRFKKMAGHAGGDPRVV-NCKVF 433

Query: 181 SVDDKRGLILVKGCVPGAK 199
            ++ +R LI +KGCVPG K
Sbjct: 434 RIEAQRNLIFLKGCVPGYK 452


>gi|32475058|ref|NP_868052.1| 50S ribosomal protein L3 [Rhodopirellula baltica SH 1]
 gi|42559597|sp|Q7UN20|RL3_RHOBA RecName: Full=50S ribosomal protein L3
 gi|32445598|emb|CAD75599.1| 50S ribosomal protein L3 [Rhodopirellula baltica SH 1]
          Length = 228

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/216 (36%), Positives = 119/216 (55%), Gaps = 22/216 (10%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ RK+GMT ++  +G  +PVTV+    C V+  R+ D++GY AVQ+G  +   + 
Sbjct: 1   MSPSILGRKIGMTQIFLEDGTAVPVTVVQAGPCHVLQVRSKDRDGYEAVQMGFEDKPRRL 60

Query: 61  VSKPMRGFFSSV-------------------NVSPKKKLFEFRVQKDDDLLPVGSVFSPS 101
             +  RG  +++                   +  P++ + EFR   + +   VG   +  
Sbjct: 61  AKRSERGQVATIESKRSKKRSAAGIEAPAKADCEPQRFVREFRGSSEAN---VGDTLTVE 117

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   + VD+TG + G+GF+G MKRHNF G RATHGV   HR  G TG    P R FK K
Sbjct: 118 QFNDVKKVDITGTSKGRGFAGVMKRHNFAGQRATHGVKKCHRHAGGTGMSASPSRTFKGK 177

Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197
           +MAG+ G  +VT +NLEVV VD +  L++++G VPG
Sbjct: 178 RMAGQYGNAKVTTRNLEVVRVDAENNLLMIRGAVPG 213


>gi|303237517|ref|ZP_07324082.1| 50S ribosomal protein L3 [Prevotella disiens FB035-09AN]
 gi|302482337|gb|EFL45367.1| 50S ribosomal protein L3 [Prevotella disiens FB035-09AN]
          Length = 204

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/203 (40%), Positives = 122/203 (60%), Gaps = 4/203 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G GEAK    SK
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTIEKDGYKAVQLGFGEAKESRTSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G F     +PKK L EF+  ++ +L   G   +   F   + VDV G + GKGF G 
Sbjct: 63  PQQGHFKKAGTTPKKHLAEFKFDEEYNL---GDTITVELFNDTKFVDVVGTSKGKGFQGV 119

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           MKRH FGG+ ++THG     R  GS G    P +VFK  +M G MGG+ VT +NL+V+ V
Sbjct: 120 MKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGHMGGDTVTTQNLQVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205
             +  ++LVKG V G   ++ I+
Sbjct: 180 IPEHNILLVKGSVAGCNGSTLII 202


>gi|15605616|ref|NP_212989.1| ribosomal protein L03 [Aquifex aeolicus VF5]
 gi|3914748|sp|O66431|RL3_AQUAE RecName: Full=50S ribosomal protein L3
 gi|2982767|gb|AAC06393.1| ribosomal protein L03 [Aquifex aeolicus VF5]
          Length = 241

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/206 (43%), Positives = 119/206 (57%), Gaps = 12/206 (5%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLD-NCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  K+GMT V   +G  IPVTV+    N  V V     K+GY A+Q+GA EAK K
Sbjct: 1   MPLGLIGEKVGMTRVLLKDGTAIPVTVIKFPVNYVVQVKSQNTKDGYNALQIGAYEAKEK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-----LPVGSVFSPSYFTVGQLVDVTGM 114
           +++KP+ G F    V   ++L+EFRV   ++      L V  VF P     G LVDV G+
Sbjct: 61  HLTKPLIGHFKKHGVPLLRRLWEFRVDNPEEFQSGQQLKVEDVFKP-----GDLVDVWGI 115

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           + G+GF+GAMKR +F G   +HG    HR+ G+ G R DPGRV+K K+M G  G   V V
Sbjct: 116 SKGRGFAGAMKRWDFAGFPKSHGHRY-HRAVGAIGQRTDPGRVWKGKRMPGHYGAKPVRV 174

Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKK 200
           + L VV V  +   ILVKG VPG  K
Sbjct: 175 QGLFVVDVLPEENAILVKGSVPGHNK 200


>gi|224123986|ref|XP_002319213.1| predicted protein [Populus trichocarpa]
 gi|222857589|gb|EEE95136.1| predicted protein [Populus trichocarpa]
          Length = 222

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 112/199 (56%), Gaps = 2/199 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62
           GV+  KLGM   +   G+ +PVTV+      +V   +T   +GY AVQVG    + K ++
Sbjct: 8   GVMGTKLGMMTYFEPNGKVVPVTVVGFREGNIVTQIKTDATDGYDAVQVGYRRVRDKKLT 67

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G      V P + L EFR+Q  D       +     F  G LVDV+G TIGKGF G
Sbjct: 68  KPEMGHLEKAGVIPMRHLQEFRLQGLDGFEIGQKLLFEELFKEGDLVDVSGTTIGKGFQG 127

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHNF     +HG S SHR+ GS G    PGRV+K KKM GRMGG +  ++ L++V +
Sbjct: 128 GIKRHNFKRGPMSHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKI 186

Query: 183 DDKRGLILVKGCVPGAKKN 201
           D+   ++++KG +PG   N
Sbjct: 187 DNDLRVVMIKGALPGKPGN 205


>gi|286142696|gb|ADC41378.1| ribosomal protein L3 [Streptomyces microflavus]
 gi|286142702|gb|ADC41381.1| ribosomal protein L3 [Streptomyces microflavus]
 gi|286142704|gb|ADC41382.1| ribosomal protein L3 [Streptomyces alboviridis]
 gi|286142706|gb|ADC41383.1| ribosomal protein L3 [Streptomyces microflavus]
 gi|286142712|gb|ADC41386.1| ribosomal protein L3 [Streptomyces albidus]
          Length = 167

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/167 (46%), Positives = 100/167 (59%), Gaps = 1/167 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+    C V   RT D +GY AVQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVELRT-PDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            A HGV   HRS GS G    PGRVFK  +MAGRMG  RVT +NL +
Sbjct: 120 GAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTI 166


>gi|330752348|emb|CBL87301.1| ribosomal protein L3 [uncultured Sphingobacteria bacterium]
          Length = 205

 Score =  142 bits (359), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 119/204 (58%), Gaps = 4/204 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           V+ +K+GMT ++ + G++ P TV+  +   +   ++ + +GY +VQ+ + E K K+ +KP
Sbjct: 4   VIGKKIGMTAIFTVNGKKEPCTVVSCEPNVITQIKSEESDGYSSVQIASIEKKEKSSNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
             G F+    +PK+ + E R    +    VG  F    F  GQ VDV G + GKGF G +
Sbjct: 64  EMGHFAKAKTTPKRVVMEIRDYTGEGT--VGDSFGVEIFEEGQFVDVVGTSKGKGFQGVV 121

Query: 125 KRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           KRH F G+  ATHG     R+ GS G    P RVFK  +MAGRMGG RV ++NL ++ VD
Sbjct: 122 KRHGFRGVGEATHGQHNRLRAPGSLGAGSTPSRVFKGTRMAGRMGGERVKMQNLRILKVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207
            +  ++++ G VPG  K S++++ 
Sbjct: 182 TENNVLVISGAVPG-HKGSYVIIE 204


>gi|91216910|ref|ZP_01253874.1| 50S ribosomal protein L3 [Psychroflexus torquis ATCC 700755]
 gi|91185071|gb|EAS71450.1| 50S ribosomal protein L3 [Psychroflexus torquis ATCC 700755]
          Length = 204

 Score =  142 bits (358), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 119/205 (58%), Gaps = 3/205 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C V   RT + +GY A+Q+G  +   KN +
Sbjct: 2   SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTNEVDGYEALQLGFDDKSDKNAT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F     S K+K+ EF+  K++    +G   +   F   + VDV+  + GKGF G
Sbjct: 62  KADLGHFKKAGSSVKRKVIEFQGFKEE--YKLGDHITVDLFKENEFVDVSATSKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRH F G + THG     R+ GS G    P R+FK  KM G+MG  +V V+NL V+ V
Sbjct: 120 VVKRHGFAGSQRTHGQQSMLRAPGSVGAASYPARIFKGMKMGGQMGSQKVKVQNLRVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             ++ LI++KGCVPG   N+++ ++
Sbjct: 180 VPEKNLIVIKGCVPG-HNNTYVTIQ 203


>gi|297621720|ref|YP_003709857.1| 50S ribosomal protein L3 [Waddlia chondrophila WSU 86-1044]
 gi|297377021|gb|ADI38851.1| 50S ribosomal protein L3 [Waddlia chondrophila WSU 86-1044]
          Length = 220

 Score =  142 bits (358), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 81/216 (37%), Positives = 123/216 (56%), Gaps = 9/216 (4%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN---- 60
           ++ +K GMT +++ +G  +  TV+ ++   V   +T   +GY AVQVG  +   K+    
Sbjct: 5   LMGKKRGMTHLFDEKGNVVVCTVIEMEPNVVTQIKTQGTDGYDAVQVGFDKVTTKDPRTM 64

Query: 61  ---VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
              V KP+RG F    V P++ + E R+  D     VG  F  + F   + +D T ++IG
Sbjct: 65  DQRVKKPLRGHFKKAGVEPRRHMLESRLS-DVTGYQVGQEFDVTAFNEVKFIDATAISIG 123

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF GAMK H F G+ A+HG   +HRS GSTG R  PGR F   K A +MG  +VT++NL
Sbjct: 124 KGFQGAMKLHGFSGMPASHGAKKNHRSLGSTGGRSTPGRCFPGGKRASQMGNRQVTIQNL 183

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           E+V +  +  +++VKG +PG  KN  + +R + K A
Sbjct: 184 EIVQIIPEENVVVVKGSIPGP-KNGVVTMRQAVKKA 218


>gi|222150445|ref|YP_002559598.1| 50S ribosomal protein L3 [Macrococcus caseolyticus JCSC5402]
 gi|254803679|sp|B9E9J1|RL3_MACCJ RecName: Full=50S ribosomal protein L3
 gi|222119567|dbj|BAH16902.1| 50S ribosomal protein L3 [Macrococcus caseolyticus JCSC5402]
          Length = 220

 Score =  142 bits (358), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/208 (40%), Positives = 117/208 (56%), Gaps = 10/208 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY ++Q+G  + +   
Sbjct: 1   MTKGILGRKVGMTQVFGENGELIPVTVVEAAQNVVLQKKTEEVDGYSSIQIGFEDKQAYK 60

Query: 59  ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
                 K  +KP  G       +PK+ + EFR   D +   VG   +   F  G +VDVT
Sbjct: 61  ADRKSNKFATKPAEGHAKKAGTAPKRFIREFR-NVDTEAYEVGQEVTVDTFQTGDIVDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH       +HG S  HR  GS G   D  +VFK K + GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQSRGPMSHG-SRYHRRPGSMGMASDASKVFKGKALPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKK 200
           T++NLE+V VD +  +ILVKG VPG KK
Sbjct: 179 TMQNLEIVKVDAENNVILVKGNVPGPKK 206


>gi|257784963|ref|YP_003180180.1| 50S ribosomal protein L3 [Atopobium parvulum DSM 20469]
 gi|257473470|gb|ACV51589.1| ribosomal protein L3 [Atopobium parvulum DSM 20469]
          Length = 206

 Score =  142 bits (358), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/207 (43%), Positives = 122/207 (58%), Gaps = 3/207 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M + ++ RKLGMT V++     +PVTV+    C V   +T++ +GY AVQ+G G+   K+
Sbjct: 1   MVNTILGRKLGMTQVWDENDNVVPVTVVLAGPCTVSQVKTVETDGYNAVQIGFGDISEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM G F +  V P + L E RV+ D      G V + + F+    VDVTG + GKGF
Sbjct: 61  VNKPMAGHFKAQGVEPMRYLREVRVE-DASEHKTGDVVTVADFSEVTTVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF     THG S + R  GS G    P RV K   M G MG  RVTVKNL++V
Sbjct: 120 QGTVKRWNFSRGPMTHG-SRNQRRPGSIGQCAYPARVRKGLHMYGHMGAERVTVKNLKLV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207
            VD ++ L+L+KG VPG  KN+ + VR
Sbjct: 179 RVDAEQNLMLIKGAVPGG-KNALVQVR 204


>gi|157363442|ref|YP_001470209.1| 50S ribosomal protein L3 [Thermotoga lettingae TMO]
 gi|166990942|sp|A8F4R1|RL3_THELT RecName: Full=50S ribosomal protein L3
 gi|157314046|gb|ABV33145.1| ribosomal protein L3 [Thermotoga lettingae TMO]
          Length = 210

 Score =  142 bits (358), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/197 (41%), Positives = 115/197 (58%), Gaps = 6/197 (3%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RK+GMT ++ I    IPVTV+    C VV  +    +GY A+QVG     +K V+KP
Sbjct: 4   ILGRKIGMTRLF-INDVSIPVTVVRAGPCYVVQKKNPQIDGYCAIQVGF--EHLKRVNKP 60

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           + G F    V P + L E R++ +++L    +G       F  G+ VD+TG T G+GFSG
Sbjct: 61  LEGHFKKAQVKPLRLLREIRLEDENELDSYEIGQEIKLDIFQPGEKVDITGWTKGRGFSG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR  F G    HG S  HR  GS G   +P ++FK KKM GR G  RVT+ NLEV+ +
Sbjct: 121 GIKRWGFSGGPRAHG-SKFHRELGSLGQHTEPAKIFKGKKMPGRYGNERVTIHNLEVIKI 179

Query: 183 DDKRGLILVKGCVPGAK 199
           D +  L+++KG VPGA+
Sbjct: 180 DLENNLLVLKGSVPGAR 196


>gi|325294396|ref|YP_004280910.1| 50S ribosomal protein L3 [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325064844|gb|ADY72851.1| 50S ribosomal protein L3 [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 207

 Score =  142 bits (357), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 86/199 (43%), Positives = 118/199 (59%), Gaps = 6/199 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT ++  +G+ I VTV+    C VV  RT +++GY A+Q+G  E K K+ SK
Sbjct: 3   GILGRKVGMTQIFTEDGKAIAVTVIEAGPCTVVQKRTPERDGYSALQLGFME-KNKHESK 61

Query: 64  ---PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
              P+ G F    + P + L E +   + D   VG   +   F  G+ VD+TG + G+GF
Sbjct: 62  FPKPLLGHFKKAGIKPTRWLKEVKFD-NIDQYNVGDKITVEIFQPGEKVDITGTSKGRGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH FGG R +HG S  H   GS G    PGRV K K+MAG  G   VT++NLE+V
Sbjct: 121 AGYHKRHGFGGGRKSHG-SDFHEGPGSIGACAFPGRVHKGKRMAGHYGNETVTIRNLEIV 179

Query: 181 SVDDKRGLILVKGCVPGAK 199
            V  ++ LILVKG VPG K
Sbjct: 180 DVIPEKNLILVKGSVPGHK 198


>gi|257790717|ref|YP_003181323.1| 50S ribosomal protein L3 [Eggerthella lenta DSM 2243]
 gi|317488572|ref|ZP_07947117.1| 50S ribosomal protein L3 [Eggerthella sp. 1_3_56FAA]
 gi|325831933|ref|ZP_08165030.1| 50S ribosomal protein L3 [Eggerthella sp. HGA1]
 gi|257474614|gb|ACV54934.1| ribosomal protein L3 [Eggerthella lenta DSM 2243]
 gi|316912314|gb|EFV33878.1| 50S ribosomal protein L3 [Eggerthella sp. 1_3_56FAA]
 gi|325486254|gb|EGC88706.1| 50S ribosomal protein L3 [Eggerthella sp. HGA1]
          Length = 206

 Score =  142 bits (357), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 89/207 (42%), Positives = 124/207 (59%), Gaps = 3/207 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M + +  +K+GMT ++N + R +PVTV+  +   +   +T D +GY AVQ+G G  K K 
Sbjct: 1   MINAIYGKKIGMTQIFNEDDRVVPVTVIQAEPNTICQVKTKDSDGYEAVQLGFGAIKEKK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM G F+    +P + L E RV+   +   VG   + + F   + VDVTG + GKGF
Sbjct: 61  VNKPMAGHFAKQGTAPTRYLREVRVENAGEY-KVGDQQTVAAFAETKKVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR+ F G    HG    HR+ GS G    P RVFK  K+ G MG + VTVKNLEVV
Sbjct: 120 AGVMKRYGFRGGPGGHGAHF-HRAPGSVGQCATPSRVFKGLKLPGHMGVDTVTVKNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207
            +D+++ LILVKG +PG  KN  + VR
Sbjct: 179 RIDEEQNLILVKGAIPGG-KNGVVRVR 204


>gi|315186331|gb|EFU20092.1| 50S ribosomal protein L3 [Spirochaeta thermophila DSM 6578]
          Length = 198

 Score =  142 bits (357), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 86/196 (43%), Positives = 114/196 (58%), Gaps = 3/196 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V++  G  +PVTV+ ++   VV  RT +++GY A+ +GA   K     KP  G F  
Sbjct: 1   MTQVFDANGYVVPVTVIKVEKNTVVDVRTPERHGYRALVLGAFPLKASRAVKPYLGQFQK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             + PKK L E R   + D  P G       F   + VDV G++ GKG+ G MKRH F G
Sbjct: 61  RGLEPKKVLREIR-DFEGDYKP-GDEIGVEIFEGVRFVDVRGLSKGKGYQGVMKRHGFSG 118

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
             A+HG S  HR+HGSTG    P +V K  KMAGRMGG +V V+NL +V VD +RG +LV
Sbjct: 119 GPASHG-SKFHRAHGSTGQATYPAKVLKGTKMAGRMGGVQVCVQNLRIVEVDKERGCLLV 177

Query: 192 KGCVPGAKKNSWILVR 207
           +G VPG +K   I+ R
Sbjct: 178 EGAVPGPRKGVVIVTR 193


>gi|81859531|sp|Q5HDV8|RL3_STAAC RecName: Full=50S ribosomal protein L3
 gi|57285020|gb|AAW37114.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus COL]
 gi|323442744|gb|EGB00370.1| 50S ribosomal protein L3 [Staphylococcus aureus O46]
          Length = 209

 Score =  142 bits (357), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/208 (43%), Positives = 116/208 (55%), Gaps = 11/208 (5%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG--------AGEAKVKNVSK 63
           MT V+   G  IPVTV+      V+  +T++ +GY A+QVG              K  +K
Sbjct: 1   MTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYKKDAKSNKYANK 60

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G     + +PK+ + EFR   D D   VG   S   F  G ++DVTG++ GKGF GA
Sbjct: 61  PAEGHAKKADAAPKRFIREFR-NVDVDAYEVGQEVSVDTFVAGDVIDVTGVSKGKGFQGA 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KRH       +HG S  HR+ GS G   D  RVFK +KM GRMGGN VTV+NLEVV VD
Sbjct: 120 IKRHGQSRGPMSHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTVTVQNLEVVQVD 178

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +  +ILVKG VPG KK   + +R S K
Sbjct: 179 TENKVILVKGNVPGPKK-GLVEIRTSIK 205


>gi|223936428|ref|ZP_03628340.1| ribosomal protein L3 [bacterium Ellin514]
 gi|223894946|gb|EEF61395.1| ribosomal protein L3 [bacterium Ellin514]
          Length = 224

 Score =  142 bits (357), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/219 (39%), Positives = 125/219 (57%), Gaps = 10/219 (4%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLG T VY+ +G   PVTV+     +V+  +T D +GY AVQ+G  + K + V+K
Sbjct: 3   GLLGKKLGQTRVYDDKGVLWPVTVVLAGPNRVLQCKTQDSDGYNAVQLGFDDQKDQRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPV--GSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           P+ G     N +  K++ EFR    D  L V  G V   + F  G  +D  G+T G+GF 
Sbjct: 63  PLLGHIKKHNGAAVKRIREFR----DFTLSVKPGDVIGATIFAKGDFIDAIGVTKGRGFE 118

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF G   THG    HR  G+ G R  PG V +  +M G MG  + T +NLE++ 
Sbjct: 119 GVMKRHNFAGGDMTHGAKGWHRRAGAIGQRLFPGTVMRGMRMPGHMGQVQRTTQNLEIIQ 178

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
           V +   L+L+KG +PGA K  ++++R+S K   N KG V
Sbjct: 179 VREADNLLLIKGAIPGA-KGDYVVIRESKK---NPKGSV 213


>gi|302824121|ref|XP_002993706.1| hypothetical protein SELMODRAFT_431753 [Selaginella moellendorffii]
 gi|300138430|gb|EFJ05198.1| hypothetical protein SELMODRAFT_431753 [Selaginella moellendorffii]
          Length = 222

 Score =  142 bits (357), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 82/199 (41%), Positives = 111/199 (55%), Gaps = 2/199 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62
           GV+  K+GM   +  +GR IPVTV+      +V   +T   +GY AVQVG    +   ++
Sbjct: 8   GVMGTKVGMMTHFMPDGRAIPVTVIGFHEGNIVTQVKTEPTDGYNAVQVGYLRVRDTKLT 67

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G  + +   P + L EFR+   D   P   +     F VG LVDV+G +IGKGF G
Sbjct: 68  KPELGHLNKIGTIPMRHLQEFRLVSVDGFEPSQRLNVEDIFKVGDLVDVSGKSIGKGFQG 127

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHNF     THG S SHR  GS G    PGRV+  KKM GRMG  +  ++ LE++ +
Sbjct: 128 GIKRHNFKRGLMTHG-SKSHRQLGSIGAGTTPGRVYPGKKMPGRMGFQKTKIRKLEIIKI 186

Query: 183 DDKRGLILVKGCVPGAKKN 201
           D +   +LVKG VPG + N
Sbjct: 187 DPELRAVLVKGAVPGKRGN 205


>gi|313884599|ref|ZP_07818360.1| 50S ribosomal protein L3 [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620383|gb|EFR31811.1| 50S ribosomal protein L3 [Eremococcus coleocola ACS-139-V-Col8]
          Length = 210

 Score =  142 bits (357), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 84/212 (39%), Positives = 122/212 (57%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT  +   G  IPVTV+      V+  ++L+ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGKKVGMTQYFTENGELIPVTVVEATPNVVLQVKSLENDGYEAVQLGYQDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EFR   +     VG   +   F  G ++DVTG + GKGF
Sbjct: 61  ATKPHKGHVAKANATPKRFIREFR-NVELGSFEVGQEITVETFEAGDIIDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G   D  +VFK K + G+ GG +VT++NLEVV
Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGMASDASKVFKGKNLPGQTGGEQVTIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +V  +  LIL+KG VPG KK S + +R + KS
Sbjct: 179 AVVAEDNLILIKGNVPGPKK-SLVEIRTAVKS 209


>gi|286142600|gb|ADC41330.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142604|gb|ADC41332.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142610|gb|ADC41335.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142666|gb|ADC41363.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142670|gb|ADC41365.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142708|gb|ADC41384.1| ribosomal protein L3 [Streptomyces albovinaceus]
 gi|286142720|gb|ADC41390.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142726|gb|ADC41393.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142730|gb|ADC41395.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142742|gb|ADC41401.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142744|gb|ADC41402.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142748|gb|ADC41404.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142760|gb|ADC41410.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142784|gb|ADC41422.1| ribosomal protein L3 [Streptomyces griseus]
          Length = 167

 Score =  142 bits (357), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 77/167 (46%), Positives = 100/167 (59%), Gaps = 1/167 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+    C V   RT D +GY AVQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   + + F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVELRT-PDASEYTLGQEVTAAVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL +
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTI 166


>gi|167759862|ref|ZP_02431989.1| hypothetical protein CLOSCI_02225 [Clostridium scindens ATCC 35704]
 gi|167662481|gb|EDS06611.1| hypothetical protein CLOSCI_02225 [Clostridium scindens ATCC 35704]
          Length = 226

 Score =  141 bits (356), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 126/228 (55%), Gaps = 19/228 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK- 59
           M+  ++A K+GMT +++ +G   PVTVL    C V   +T++ +GY AVQVG  + K K 
Sbjct: 1   MKKAILATKVGMTQIFSEDGTLTPVTVLQAGPCVVTQVKTVENDGYDAVQVGFVDKKDKI 60

Query: 60  ---------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
                           V+K  +G F+   VS K+ + EF+++   +   +        F 
Sbjct: 61  VNKDKSGKKEIAHRHGVTKAEQGHFAKAGVSGKRFVREFKLENAGEY-ELAQEIKADIFE 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  +D T ++ GKGF GA+KRH       THG S  HR  GS G   DP +VFK KKM 
Sbjct: 120 AGDKIDATAISKGKGFQGAIKRHGQHRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           G MG  ++T++NLE+V VD +  LILVKG VPG KK S + ++++ K+
Sbjct: 179 GHMGSKKITIQNLEIVRVDAENNLILVKGSVPGPKK-SLVTIKEAVKA 225


>gi|241888995|ref|ZP_04776299.1| 50S ribosomal protein L3 [Gemella haemolysans ATCC 10379]
 gi|329768273|ref|ZP_08259774.1| 50S ribosomal protein L3 [Gemella haemolysans M341]
 gi|241864244|gb|EER68622.1| 50S ribosomal protein L3 [Gemella haemolysans ATCC 10379]
 gi|328837472|gb|EGF87101.1| 50S ribosomal protein L3 [Gemella haemolysans M341]
          Length = 220

 Score =  141 bits (356), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 92/224 (41%), Positives = 127/224 (56%), Gaps = 18/224 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--- 57
           M  G++ RK+GMT ++   G  IPVTV+      V+  +T +  GY A+Q+G  + +   
Sbjct: 1   MTKGILGRKVGMTQIFAENGELIPVTVVEAKGNVVLQKKTEEVEGYNAIQLGFDDKRPYD 60

Query: 58  -------VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQL 108
                  VK  +KP +G     N +PK+ + E R   D ++    VG       F  G L
Sbjct: 61  KERKDRLVKVANKPEQGHADKANTAPKRFVREIR---DAEVANYEVGQEVQVDIFAAGDL 117

Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
           VDVTG++ GKGF GA+KRH        HG S  HR  GS G    P RVFK K + G+MG
Sbjct: 118 VDVTGVSKGKGFQGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKALPGQMG 175

Query: 169 GNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           G  VT +NLE+VSVD + GLILVKGC+PG+KK S++ ++ + KS
Sbjct: 176 GVTVTTQNLEIVSVDVENGLILVKGCIPGSKK-SFVKIQSAVKS 218


>gi|283794897|ref|YP_003359250.1| ribosomal protein L3 [Cryptomonas paramecium]
 gi|253981869|gb|ACT46786.1| ribosomal protein L3 [Cryptomonas paramecium]
          Length = 210

 Score =  141 bits (356), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 84/199 (42%), Positives = 117/199 (58%), Gaps = 2/199 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT V++  G  IP T++ +  C V   +T+ K GY ++Q+G       +
Sbjct: 3   MNFGILGTKVGMTNVFDPSGVAIPGTIVKVGPCIVTQVKTVPKEGYSSIQLGYFSVAKAS 62

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SKP  G     N    + L EFRV   D+ L +G   + S F+VG  V V G ++GKGF
Sbjct: 63  LSKPELGHLKISNSQAVRYLREFRVDSPDENL-LGQEVTVSKFSVGDRVSVAGKSVGKGF 121

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG +KRH+F     THG S +HR  GS G    PGRVF  K+MAGR+GG +VT+KNL VV
Sbjct: 122 SGTVKRHHFTRGPMTHG-SKNHREPGSIGMGTTPGRVFPGKRMAGRLGGKKVTIKNLRVV 180

Query: 181 SVDDKRGLILVKGCVPGAK 199
            V  +   +++KG VPG K
Sbjct: 181 FVSLENNFLVLKGSVPGKK 199


>gi|50364938|ref|YP_053363.1| 50S ribosomal protein L3 [Mesoplasma florum L1]
 gi|81827327|sp|Q6F1Z4|RL3_MESFL RecName: Full=50S ribosomal protein L3
 gi|50363494|gb|AAT75479.1| 50S ribosomal protein L3 [Mesoplasma florum L1]
          Length = 238

 Score =  141 bits (356), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 87/215 (40%), Positives = 131/215 (60%), Gaps = 10/215 (4%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+ MT V+   G+ +PVTV+ +    ++  +TL+ NGY+A Q+G  + +   V+K
Sbjct: 3   GILGRKVEMTQVFTANGKLVPVTVVEVQPNTILQVKTLETNGYVATQLGVFDKRENLVNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSG 122
           P  G F   N  PK+ + E R   + +   VGSV S S  F  GQ VDVTG++ GKGF+G
Sbjct: 63  PELGQFKKANSVPKRFVKEIR---NMEGFEVGSVISASDIFETGQYVDVTGISKGKGFAG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KRHN+      HG S  HR  GS G   +  R+FK+KKMAG MG  + TV+NLEV+++
Sbjct: 120 AIKRHNYSRGPMAHG-SGYHRGIGSMGAIIN--RIFKSKKMAGHMGHVKRTVQNLEVIAI 176

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           D+   ++LVKG +PG  K  ++ ++ + K   N +
Sbjct: 177 DNN--IMLVKGSIPGPNK-GFVTIKANVKGLSNTQ 208


>gi|51209943|ref|YP_063607.1| ribosomal protein L3 [Gracilaria tenuistipitata var. liui]
 gi|68052932|sp|Q6B8V3|RK3_GRATL RecName: Full=50S ribosomal protein L3, chloroplastic
 gi|50657697|gb|AAT79682.1| 50S ribosomal protein L3 [Gracilaria tenuistipitata var. liui]
          Length = 205

 Score =  141 bits (356), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 121/201 (60%), Gaps = 2/201 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +K+GMT +++  G+ +PVT+L L  C +   + ++ +GY A+Q+G  +     
Sbjct: 1   MKIGLLGKKIGMTQIFDPGGKALPVTILKLGPCLITDIKKMESHGYAAIQIGYVKVNGNK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++K   G  +  N+   K L E++V   ++   +G   +    ++ Q + V+G +IGKGF
Sbjct: 61  LNKAQIGHLNKYNMPLVKFLKEYKVASTENY-QIGKWITVEDLSINQNISVSGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNF     +HG S +HR  GS G    PG+VF  KKMAGRMGG +VT++NL+++
Sbjct: 120 TGCIKRHNFSRGPMSHG-SKNHRQPGSIGAGTTPGKVFAGKKMAGRMGGKKVTIQNLKII 178

Query: 181 SVDDKRGLILVKGCVPGAKKN 201
            +     LI+VKG VPG   N
Sbjct: 179 DIKINNNLIIVKGSVPGKPGN 199


>gi|83319916|ref|YP_424660.1| 50S ribosomal protein L3 [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|90110058|sp|P10134|RL3_MYCCT RecName: Full=50S ribosomal protein L3
 gi|83283802|gb|ABC01734.1| 50 ribosomal protein L3 [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 223

 Score =  141 bits (356), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 130/209 (62%), Gaps = 8/209 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+ MT V+   G+ +PVTV+ +    V+  +T+D +GY+AVQ+G  + +V  V+K
Sbjct: 3   GILGRKVEMTQVFTNSGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLVNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSG 122
           P  G F   N +PK+ + E R  +  +   +G V + S  F  G+ VDVTG++ GKGF+G
Sbjct: 63  PELGHFKKANSNPKRFVKEIRNMQGYE---IGQVINVSDIFVSGEYVDVTGISKGKGFAG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHN+      HG S  HR  GS G   +  R+FK+KKM G MG  + T++NLE++++
Sbjct: 120 GIKRHNYSRGPMAHG-SGYHRGIGSMGAIIN--RIFKSKKMPGHMGNAKRTIQNLEIIAI 176

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D    ++L+KG +PG  KNS++ ++ + K
Sbjct: 177 DQSNNIMLIKGSIPGP-KNSFVQIKQNVK 204


>gi|286142686|gb|ADC41373.1| ribosomal protein L3 [Streptomyces olivoviridis]
          Length = 167

 Score =  141 bits (355), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 77/167 (46%), Positives = 100/167 (59%), Gaps = 1/167 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+    C V   RT D +GY +VQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVELRT-PDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            A HGV   HRS GS G    PGRVFK  +MAGRMG  RVT +NL +
Sbjct: 120 GAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTI 166


>gi|286142602|gb|ADC41331.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142606|gb|ADC41333.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142612|gb|ADC41336.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142614|gb|ADC41337.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142616|gb|ADC41338.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142660|gb|ADC41360.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142662|gb|ADC41361.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142664|gb|ADC41362.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142668|gb|ADC41364.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142672|gb|ADC41366.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142674|gb|ADC41367.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142676|gb|ADC41368.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142678|gb|ADC41369.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142680|gb|ADC41370.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142682|gb|ADC41371.1| ribosomal protein L3 [Streptomyces sp. DSM 40932]
 gi|286142688|gb|ADC41374.1| ribosomal protein L3 [Streptomyces anulatus]
 gi|286142690|gb|ADC41375.1| ribosomal protein L3 [Streptomyces reticuli]
 gi|286142750|gb|ADC41405.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142752|gb|ADC41406.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142762|gb|ADC41411.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142764|gb|ADC41412.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142770|gb|ADC41415.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142772|gb|ADC41416.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142774|gb|ADC41417.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142776|gb|ADC41418.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142778|gb|ADC41419.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142780|gb|ADC41420.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142790|gb|ADC41425.1| ribosomal protein L3 [Streptomyces sp. E1002]
          Length = 167

 Score =  141 bits (355), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 77/167 (46%), Positives = 99/167 (59%), Gaps = 1/167 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+    C V   RT D +GY AVQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVELRT-PDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL +
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTI 166


>gi|153816252|ref|ZP_01968920.1| hypothetical protein RUMTOR_02501 [Ruminococcus torques ATCC 27756]
 gi|145846435|gb|EDK23353.1| hypothetical protein RUMTOR_02501 [Ruminococcus torques ATCC 27756]
          Length = 242

 Score =  141 bits (355), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 124/228 (54%), Gaps = 20/228 (8%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M+  ++A K+GMT ++N E G  IPVTVL    C V   +T++ +GY AVQVG  + K K
Sbjct: 16  MKKAILATKVGMTQIFNHEDGVLIPVTVLQAGPCVVTQVKTVENDGYSAVQVGYVDKKDK 75

Query: 60  ----------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
                            V+K  +G F    VS K+ + EFR    ++   +        F
Sbjct: 76  IVTKDGSGRKAIAHRNGVTKAEKGHFDKAGVSGKRYVKEFRFDNAEEY-ALAQEIKADIF 134

Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
             G  +D T ++ GKGF GA+KRH       THG S  HR  GS G   DP +VFK KKM
Sbjct: 135 AEGDHIDATAISKGKGFQGAIKRHGQSRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKM 193

Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            G+MG  ++TV+NLE+V VD +  L+LVKG VPG KK   + ++++ K
Sbjct: 194 PGQMGNKKITVQNLEIVRVDAENNLLLVKGSVPGPKK-CLVTIKETVK 240


>gi|313665577|ref|YP_004047448.1| 50S ribosomal protein L3 [Mycoplasma leachii PG50]
 gi|312949526|gb|ADR24122.1| 50S ribosomal protein L3 [Mycoplasma leachii PG50]
          Length = 223

 Score =  141 bits (355), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 130/209 (62%), Gaps = 8/209 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+ MT V+   G+ +PVTV+ +    V+  +T+D +GY+AVQ+G  + +V  V+K
Sbjct: 3   GILGRKVEMTQVFTNSGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLVNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSG 122
           P  G F   N +PK+ + E R  +  +   +G V + S  F  G+ VDVTG++ GKGF+G
Sbjct: 63  PELGHFKKANSNPKRFVKEIRNMQGYE---IGQVINVSDIFVSGEYVDVTGISKGKGFAG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHN+      HG S  HR  GS G   +  R+FK+KKM G MG  + T++NLE++++
Sbjct: 120 GIKRHNYSRGPMAHG-SGYHRGIGSMGAIIN--RIFKSKKMPGHMGNAKRTIQNLEIIAI 176

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D    ++L+KG +PG  KNS++ ++ + K
Sbjct: 177 DQTNNIMLIKGSIPGP-KNSFVQIKQNVK 204


>gi|317501774|ref|ZP_07959960.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331088705|ref|ZP_08337615.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 3_1_46FAA]
 gi|316896807|gb|EFV18892.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330407228|gb|EGG86731.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 227

 Score =  141 bits (355), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 124/228 (54%), Gaps = 20/228 (8%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M+  ++A K+GMT ++N E G  IPVTVL    C V   +T++ +GY AVQVG  + K K
Sbjct: 1   MKKAILATKVGMTQIFNHEDGVLIPVTVLQAGPCVVTQVKTVENDGYSAVQVGYVDKKDK 60

Query: 60  ----------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
                            V+K  +G F    VS K+ + EFR    ++   +        F
Sbjct: 61  IVTKDGSGRKAIAHRNGVTKAEKGHFDKAGVSGKRYVKEFRFDNAEEY-ALAQEIKADIF 119

Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
             G  +D T ++ GKGF GA+KRH       THG S  HR  GS G   DP +VFK KKM
Sbjct: 120 AEGDHIDATAISKGKGFQGAIKRHGQSRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKM 178

Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            G+MG  ++TV+NLE+V VD +  L+LVKG VPG KK   + ++++ K
Sbjct: 179 PGQMGNKKITVQNLEIVRVDAENNLLLVKGSVPGPKK-CLVTIKETVK 225


>gi|255639119|gb|ACU19859.1| unknown [Glycine max]
          Length = 264

 Score =  141 bits (355), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 110/199 (55%), Gaps = 2/199 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62
           GV+  KLGM   +  +G  +PVTV+      +V   +T   +GY AVQVG    + + ++
Sbjct: 50  GVMGTKLGMMSYFESDGEVVPVTVVGFKEGNIVTQIKTEATDGYDAVQVGYRRVRDRKLT 109

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G    V   P + L EFR+Q  D       +     F  G LVDV+G TIGKGF G
Sbjct: 110 KPEMGHLHKVGAIPMRHLQEFRLQAIDGFDLNQRLLFDETFKEGDLVDVSGTTIGKGFQG 169

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHNF     THG S SHR  GS G    PGRV+K KKM GRMGG +  ++ L++V +
Sbjct: 170 GIKRHNFKRGPMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKI 228

Query: 183 DDKRGLILVKGCVPGAKKN 201
           D    ++++KG +PG   N
Sbjct: 229 DKDLNVLMIKGALPGKPGN 247


>gi|323490623|ref|ZP_08095828.1| 50S ribosomal protein L3 [Planococcus donghaensis MPA1U2]
 gi|323395715|gb|EGA88556.1| 50S ribosomal protein L3 [Planococcus donghaensis MPA1U2]
          Length = 209

 Score =  141 bits (355), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 87/212 (41%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVIEASPNVVLQKKTVEVDGYEAIQLGFEDKRDKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + E R     D   +G       F  G +VDVTG T GKGF
Sbjct: 61  SNKPSKGHVAKANTAPKRFIRELRNVNLADY-EIGQEVKVDVFAEGDVVDVTGTTKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       THG S  HR  GS G    P RVFK KK+ G+MGG  +T++NL +V
Sbjct: 120 QGVIKRHGQSRGPMTHG-SRYHRRPGSMGPVA-PNRVFKQKKLPGQMGGTTITIQNLSIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPG++K + I V+ + K+
Sbjct: 178 KVDLERNLLLVKGNVPGSRK-ALIRVKSATKA 208


>gi|286142694|gb|ADC41377.1| ribosomal protein L3 [Streptomyces griseobrunneus]
 gi|286142698|gb|ADC41379.1| ribosomal protein L3 [Streptomyces bacillaris]
 gi|286142710|gb|ADC41385.1| ribosomal protein L3 [Kitasatospora mediocidica]
 gi|286142716|gb|ADC41388.1| ribosomal protein L3 [Streptomyces roseochromogenes]
          Length = 167

 Score =  141 bits (355), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 77/167 (46%), Positives = 99/167 (59%), Gaps = 1/167 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+    C V   RT D +GY AVQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPCVVTQVRTNDNDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVELRT-PDASEYTLGQEVTADVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL +
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTI 166


>gi|281422251|ref|ZP_06253250.1| 50S ribosomal protein L3 [Prevotella copri DSM 18205]
 gi|281403756|gb|EFB34436.1| 50S ribosomal protein L3 [Prevotella copri DSM 18205]
          Length = 204

 Score =  141 bits (355), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 81/205 (39%), Positives = 126/205 (61%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ IP TV+ +  C V   +T++K+GY A Q+G  EAK K  S+
Sbjct: 3   GLIGKKIGMTSVFSADGKNIPCTVIEVGPCVVTQVKTVEKDGYKAYQLGFEEAKEKRTSQ 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           PM G F     +PKK L EF+  ++ +L   G   +   F   + VDV G + GKGF G 
Sbjct: 63  PMMGIFKKAGTTPKKHLAEFKFDEEYNL---GDTITVEIFNDCKFVDVIGTSKGKGFQGV 119

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ ++THG     R  GS G    P +VFK  +M G+MGG+RVT +NL+V+ +
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKI 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             ++ L++VKG   G K ++ ++ +
Sbjct: 180 IPEQNLLIVKGSFAGCKGSTVLIEK 204


>gi|53715466|ref|YP_101458.1| 50S ribosomal protein L3 [Bacteroides fragilis YCH46]
 gi|60683438|ref|YP_213582.1| 50S ribosomal protein L3 [Bacteroides fragilis NCTC 9343]
 gi|253566670|ref|ZP_04844123.1| 50S ribosomal protein L3 [Bacteroides sp. 3_2_5]
 gi|255011646|ref|ZP_05283772.1| 50S ribosomal protein L3 [Bacteroides fragilis 3_1_12]
 gi|265767548|ref|ZP_06095214.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_16]
 gi|313149482|ref|ZP_07811675.1| 50S ribosomal protein L3 [Bacteroides fragilis 3_1_12]
 gi|81313514|sp|Q5L8A9|RL3_BACFN RecName: Full=50S ribosomal protein L3
 gi|81824898|sp|Q64NK8|RL3_BACFR RecName: Full=50S ribosomal protein L3
 gi|52218331|dbj|BAD50924.1| 50S ribosomal protein L3 [Bacteroides fragilis YCH46]
 gi|60494872|emb|CAH09679.1| putative 50S ribosomal protein L3 [Bacteroides fragilis NCTC 9343]
 gi|251944842|gb|EES85317.1| 50S ribosomal protein L3 [Bacteroides sp. 3_2_5]
 gi|263252853|gb|EEZ24365.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_16]
 gi|301164923|emb|CBW24484.1| putative 50S ribosomal protein L3 [Bacteroides fragilis 638R]
 gi|313138249|gb|EFR55609.1| 50S ribosomal protein L3 [Bacteroides fragilis 3_1_12]
          Length = 205

 Score =  141 bits (355), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 84/205 (40%), Positives = 128/205 (62%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PK+ L EF+  +++  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKRHLAEFKEFENE--LNLGDTVTVELFDGADYVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ ++THG     R  GS G    P +VFK  +M G+MGG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQSTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  L+L+KG VPG  K S +L+ 
Sbjct: 181 IAEHNLLLIKGSVPGC-KGSIVLIE 204


>gi|286142796|gb|ADC41428.1| ribosomal protein L3 [Streptomyces netropsis]
          Length = 167

 Score =  140 bits (354), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 77/167 (46%), Positives = 100/167 (59%), Gaps = 1/167 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+    C V   RT D +GY +VQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   + + F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVELRTA-DASEYTLGQEITAAVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTV 166


>gi|44209|emb|CAA29704.1| unnamed protein product [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 223

 Score =  140 bits (354), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 130/209 (62%), Gaps = 8/209 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+ MT V+   G+ +PVTV+ +    V+  +T+D +GY+AVQ+G  + +V  V+K
Sbjct: 3   GILGRKVEMTQVFTNSGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLVNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSG 122
           P  G F   N +PK+ + E R  +  +   +G V + S  F  G+ VDVTG++ GKGF+G
Sbjct: 63  PELGHFKKANSNPKRFVKEIRNMQGYE---IGQVINVSDIFVSGEYVDVTGISKGKGFAG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHN+      HG S  HR  GS G   +  R+FK+KKM G MG  + T++NLE++++
Sbjct: 120 GIKRHNYSRGPMAHG-SGYHRGIGSMGAIIN--RIFKSKKMPGHMGNAKRTIQNLEIIAI 176

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D    ++L+KG +PG  KNS++ ++ + K
Sbjct: 177 DQSNNIMLIKGPIPGP-KNSFVQIKQNVK 204


>gi|210631082|ref|ZP_03296738.1| hypothetical protein COLSTE_00623 [Collinsella stercoris DSM 13279]
 gi|210160170|gb|EEA91141.1| hypothetical protein COLSTE_00623 [Collinsella stercoris DSM 13279]
          Length = 206

 Score =  140 bits (354), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 89/203 (43%), Positives = 118/203 (58%), Gaps = 3/203 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RK+GMT V++ +   +PVTV+    C V   +T   +GY AVQ+G G+ K K+V+KP
Sbjct: 5   ILGRKIGMTQVWDEDDNVVPVTVIQAGPCTVSQVKTEATDGYNAVQIGFGDIKSKHVNKP 64

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M G F+   V P + L E RV+  ++   VG V + + F     VDV G + GKGF G +
Sbjct: 65  MAGHFAKAGVEPVRYLREVRVENGEE-HKVGDVVTVADFESVAKVDVIGTSKGKGFQGRI 123

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR N      +HG  I  R  GS G    P RV K  KMAG MG  RVTVKNL VV +D 
Sbjct: 124 KRWNQHRGPMSHGSHI-QRHPGSIGQCAYPARVLKGVKMAGHMGNARVTVKNLSVVRIDA 182

Query: 185 KRGLILVKGCVPGAKKNSWILVR 207
           ++ LILVKG VPG  KN  + +R
Sbjct: 183 EQNLILVKGAVPGG-KNGLVAIR 204


>gi|257456892|ref|ZP_05622073.1| 50S ribosomal protein L3 [Treponema vincentii ATCC 35580]
 gi|257445601|gb|EEV20663.1| 50S ribosomal protein L3 [Treponema vincentii ATCC 35580]
          Length = 208

 Score =  140 bits (354), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 87/208 (41%), Positives = 123/208 (59%), Gaps = 5/208 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT +++ EGR  PVTVL +    VV  +  D  GY AV +G GE K   VSK
Sbjct: 3   GLIGKKIGMTQLFDEEGRLTPVTVLQVVPNTVVAVKDADHFGYEAVVLGTGELKEGRVSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
                F+   V+P + L EFR    D  + VG+          + +D+T ++ GKGF G 
Sbjct: 63  VYANQFAE-GVAPVRLLKEFR--GFDKEVAVGAKIGVEVLESVRYLDITAISKGKGFQGV 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR  FGG RA+HG S  HR  GSTG    PGR FKN KM G MG  RVTV+NL +  +D
Sbjct: 120 VKRWGFGGGRASHG-SKFHREAGSTGQCTSPGRSFKNVKMPGHMGAERVTVQNLRIEKID 178

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            + G+++V+G VPG KK++ + ++ + K
Sbjct: 179 PELGVVMVRGSVPG-KKDAVVFLKSAVK 205


>gi|153854970|ref|ZP_01996183.1| hypothetical protein DORLON_02189 [Dorea longicatena DSM 13814]
 gi|149752467|gb|EDM62398.1| hypothetical protein DORLON_02189 [Dorea longicatena DSM 13814]
          Length = 226

 Score =  140 bits (354), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 125/228 (54%), Gaps = 19/228 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52
           M+  ++A K+GMT ++N +G   PVTVL    C V   +T++ +GY AVQVG        
Sbjct: 1   MKKAILATKVGMTQIFNEDGTLTPVTVLQAGPCAVTQIKTVENDGYEAVQVGFVDKKDKI 60

Query: 53  -----AGEAKV---KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
                 G+ ++     V+K  +G F+   V+ K+ + EF+ +   +   +G       F 
Sbjct: 61  INKDKGGKKEIVHRHGVTKAEQGHFAKAGVTGKRYVREFKFENASEY-ELGQEIKADIFA 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  +D T ++ GKGF GA+KRHN       HG S  HR  GS G   DP +VFK K M 
Sbjct: 120 AGDKIDATAISKGKGFQGAIKRHNQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKHMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           G MG  ++TV+NL VV VD +  L+LVKG VPG KK S + ++++ K+
Sbjct: 179 GHMGSKKITVQNLVVVRVDAENNLLLVKGSVPGPKK-SLVTIKEAVKA 225


>gi|193214800|ref|YP_001995999.1| 50S ribosomal protein L3 [Chloroherpeton thalassium ATCC 35110]
 gi|226725149|sp|B3QY24|RL3_CHLT3 RecName: Full=50S ribosomal protein L3
 gi|193088277|gb|ACF13552.1| ribosomal protein L3 [Chloroherpeton thalassium ATCC 35110]
          Length = 208

 Score =  140 bits (354), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 79/204 (38%), Positives = 117/204 (57%), Gaps = 1/204 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           S ++ +K+GMT +++   + IP TV+    C V   +T+DK+GY A Q+   + K    +
Sbjct: 2   SAILGKKIGMTSLFDENRKAIPCTVIEAGPCFVSQVKTVDKDGYAAYQICFDKKKENRTA 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V P  K+ EFR +   D L  G     S F  G  V V+G++ GKGF+G
Sbjct: 62  KPQLGHFQKSGVEPSYKMSEFRKEIFADELNAGDEVKVSIFKEGDTVKVSGVSKGKGFAG 121

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR++FGG   THG S   R+ GS G    P R FK ++MAGR G + VT++ L+VV V
Sbjct: 122 VVKRYHFGGGSKTHGQSDRLRAPGSVGGSSFPSRTFKGQRMAGRKGSDSVTIRGLKVVKV 181

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
             +  L+++KG VPG   NS++ +
Sbjct: 182 LPESNLLVIKGAVPGP-NNSYLEI 204


>gi|286142802|gb|ADC41431.1| ribosomal protein L3 [Streptomyces mashuensis]
          Length = 167

 Score =  140 bits (354), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 77/167 (46%), Positives = 99/167 (59%), Gaps = 1/167 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+    C V   RT D +GY +VQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPCIVTQVRTNDTDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVEIRT-ADASEYTLGQELTAEVFEAGVKVDVTGKSKGKGFAGVMKRHNFRGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTV 166


>gi|302036665|ref|YP_003796987.1| 50S ribosomal protein L3 [Candidatus Nitrospira defluvii]
 gi|300604729|emb|CBK41061.1| 50S ribosomal protein L3 [Candidatus Nitrospira defluvii]
          Length = 206

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/212 (41%), Positives = 120/212 (56%), Gaps = 6/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M +G++ +KLGMT VY+ E    PVTV+    C+VV  +T +++GY AVQ+  GE K + 
Sbjct: 1   MTNGLLGKKLGMTQVYD-ESVLAPVTVIEAGPCRVVSVKTKERDGYEAVQLSFGEVKEQR 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +S+   G       +P + L EF    D   + VG       F  G  VDV G++ GKGF
Sbjct: 60  LSRGELGHLKKHQAAPSRWLREFPKVGD---VTVGQTVKVDMFKKGDWVDVVGVSKGKGF 116

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G ++RHN+ G   THG S+ HR+ GS G    P RV+KNK + G MG  RVTV+ L+VV
Sbjct: 117 QGVVRRHNYAGGPETHG-SMFHRAPGSIGASSYPSRVWKNKALPGHMGDERVTVQRLKVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
                  L+ V+G VPG   N  ++VR S KS
Sbjct: 176 DARPDENLLFVRGAVPGG-VNGLLIVRKSKKS 206


>gi|294674771|ref|YP_003575387.1| 50S ribosomal protein L3 [Prevotella ruminicola 23]
 gi|294472870|gb|ADE82259.1| ribosomal protein L3 [Prevotella ruminicola 23]
          Length = 204

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/203 (41%), Positives = 121/203 (59%), Gaps = 4/203 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V++ +G+ +P TV+    C V   ++++K+GY AVQ+  GE K KN +K
Sbjct: 3   GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKSVEKDGYEAVQLAFGEKKEKNTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
            M G F   N +PK  L EF+    D  L +G   +   F   + VDV G + GKGF G 
Sbjct: 63  AMMGIFKKANTTPKAHLAEFKF---DTELNLGDTVTVDIFEGAEFVDVVGTSKGKGFQGV 119

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ +ATHG     R  GS G    P +VFK  +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQATHGQDDRLRKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLKVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205
             +  LILVKG   G   ++ ++
Sbjct: 180 IPEHNLILVKGSCAGYNGSTVLI 202


>gi|229815775|ref|ZP_04446100.1| hypothetical protein COLINT_02824 [Collinsella intestinalis DSM
           13280]
 gi|229808691|gb|EEP44468.1| hypothetical protein COLINT_02824 [Collinsella intestinalis DSM
           13280]
          Length = 206

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/203 (43%), Positives = 118/203 (58%), Gaps = 3/203 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RK+GMT V++ +   +PVTV+    C V   +T   +GY AVQ+G G+ K K+V+KP
Sbjct: 5   ILGRKIGMTQVWDEDDNVVPVTVIQAGPCTVSQVKTEATDGYNAVQIGFGDIKSKHVNKP 64

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M G F+   V P + L E RV+  ++   VG V + + F     VDV G + GKGF G +
Sbjct: 65  MAGHFAKAGVEPVRYLREVRVENGEE-HKVGDVVTVADFENVAKVDVIGTSKGKGFQGRI 123

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR N      THG  I  R  GS G    P RV K  KMAG MG  RVTVKNL VV +D 
Sbjct: 124 KRWNQRRGPMTHGSHI-QRHPGSIGQCAYPARVLKGVKMAGHMGNARVTVKNLSVVRIDA 182

Query: 185 KRGLILVKGCVPGAKKNSWILVR 207
           ++ L+LVKG VPG  KN  + +R
Sbjct: 183 EQNLMLVKGAVPGG-KNGLVAIR 204


>gi|225158913|ref|ZP_03725227.1| ribosomal protein L3 [Opitutaceae bacterium TAV2]
 gi|224802531|gb|EEG20789.1| ribosomal protein L3 [Opitutaceae bacterium TAV2]
          Length = 215

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 123/212 (58%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M S ++ +K+GMT VY+ +   +PVTV+    C VV  +T + +GY AVQ+G    K KN
Sbjct: 1   MISTLLGKKIGMTQVYDAQNVLVPVTVVEAGPCPVVQVKTTETDGYNAVQLGFSVKKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLF-EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             K  +   +   +    ++  E R+  +   L  G V + + F  GQ+VDV G+T GKG
Sbjct: 61  TPKAEQAHAAKAGLENTPRVLGEVRL-NEAPTLKAGDVVTVAAFKEGQIVDVIGITKGKG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G ++R    G  A+HG S+ HR  GS G RQ PGR +KN+KM G MG  + TV+NL +
Sbjct: 120 FQGVVRRFRVAGGPASHG-SMFHRRIGSIGMRQTPGRSWKNQKMPGHMGSQQRTVQNLTI 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V +   + L+LVKG +PGA  +  ++VR + K
Sbjct: 179 VKILADKNLLLVKGAIPGANGDD-VIVRTAIK 209


>gi|317503980|ref|ZP_07961988.1| 50S ribosomal protein L3 [Prevotella salivae DSM 15606]
 gi|315665006|gb|EFV04665.1| 50S ribosomal protein L3 [Prevotella salivae DSM 15606]
          Length = 204

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/205 (40%), Positives = 124/205 (60%), Gaps = 5/205 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T +K+GY A+Q+G  EAK    SK
Sbjct: 3   GLIGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTEEKDGYKALQLGFEEAKENRTSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           PM G F     +PKK L EF+  ++ +L   G   +   F+  + VD+ G + GKGF G 
Sbjct: 63  PMMGTFKKAGTTPKKHLAEFKFNEEYNL---GDTLTVEIFSDAKFVDIVGTSKGKGFQGV 119

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ ++THG     R  GS G    P +VFK  +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  L+LVKG V G    S +L++
Sbjct: 180 IPEHNLLLVKGSVAGC-NGSTVLIK 203


>gi|158520725|ref|YP_001528595.1| ribosomal protein L3 [Desulfococcus oleovorans Hxd3]
 gi|226725163|sp|A8ZV57|RL3_DESOH RecName: Full=50S ribosomal protein L3
 gi|158509551|gb|ABW66518.1| ribosomal protein L3 [Desulfococcus oleovorans Hxd3]
          Length = 208

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 78/207 (37%), Positives = 117/207 (56%), Gaps = 3/207 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V++ +G  +PVTV+    C V   +T++ +GY A+Q+G  E K   
Sbjct: 1   MCRGIIGRKIGMTGVFSDQGEYVPVTVIEAGPCVVTQIKTVETDGYSALQLGFLEKKASK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+ G F          + E  V  D     +G V +   F+ G+ V V G+  G+GF
Sbjct: 61  INKPLAGHFKKSGGVGFAYVREMAVD-DPSAYTLGQVINAELFSAGEKVHVAGLMKGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH F G + THG   SHR  GS G    P +VFK +K+ GR G  R+T KNL++ 
Sbjct: 120 AGVVKRHGFAGGKDTHGCH-SHRVPGSIGTSAWPSKVFKGRKLPGRYGNTRITTKNLKIF 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207
            +  +  LIL+KG VPG+  N  + +R
Sbjct: 179 DIQPETNLILIKGAVPGS-NNGLVEIR 204


>gi|325280968|ref|YP_004253510.1| 50S ribosomal protein L3 [Odoribacter splanchnicus DSM 20712]
 gi|324312777|gb|ADY33330.1| 50S ribosomal protein L3 [Odoribacter splanchnicus DSM 20712]
          Length = 207

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/205 (42%), Positives = 128/205 (62%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V+++EG+ IP TV+    C V   +T++K+GY A+Q+G  E K K+ +K
Sbjct: 5   GLIGKKVGMTSVFSVEGKSIPCTVIECGPCVVTQVKTIEKDGYEALQLGFDEKKEKHTTK 64

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
            + G F     +PK+KL EF    ++  L  G V   +       VD+ G + GKG+ G 
Sbjct: 65  QLSGHFKKAGTTPKRKLVEFAGFAEEHKL--GDVIDVTILEGTAYVDIVGTSKGKGYQGV 122

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ +ATHG     R  GS G    P RVFK  +M GRMGG+RVTV+NLEV+ V
Sbjct: 123 VKRHGFGGVGQATHGQHNRLRKPGSIGACSTPARVFKGMRMGGRMGGDRVTVENLEVLKV 182

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  L+LVKG VPG+ K S+++++
Sbjct: 183 IPENNLLLVKGSVPGS-KGSYVIIQ 206


>gi|33241161|ref|NP_876103.1| 50S ribosomal protein L3 [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|42559600|sp|Q7V9W2|RL3_PROMA RecName: Full=50S ribosomal protein L3
 gi|33238691|gb|AAQ00756.1| Ribosomal protein L3 [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 219

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++ +GR IPVT++    C++   ++   +GY AVQ+  G  + K 
Sbjct: 1   MSIGILGKKLGMSQFFDEKGRSIPVTLVEAGPCRITQLKSSATDGYSAVQIAFGAVREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G  +       + + E+RV KD     +G+  +   F  GQ VDV+G ++G+GF
Sbjct: 61  INKPFQGHLAKSGDDLLRYMSEYRV-KDVGEFQLGAQITVGDFEEGQKVDVSGTSMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRH F     +HG S +HR  GSTG    PGR++  K+MAGR GG ++T + L ++
Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLMIM 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            VD  + L+++KG +PG K  S + +R +
Sbjct: 179 KVDSDKNLLVIKGSLPG-KPGSLLNIRPA 206


>gi|238810297|dbj|BAH70087.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 276

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 82/217 (37%), Positives = 122/217 (56%), Gaps = 6/217 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++   G  +PVTV+ +    V    + DKNGY+A Q+  GE K   
Sbjct: 1   MMKGILGRKIGMTQIFTELGASVPVTVIEVQPNVVTKVLSADKNGYVATQIAVGEKKEHR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP++G F+    +PK+ + E R  +  +L   G     + F  G+LVD+TG + GKGF
Sbjct: 61  SNKPLKGQFAQAKTTPKRYVKEIRGMQGYEL---GQTIKANIFKAGELVDITGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KR N      +HG     +    TG   D    RVFK   M G +G  R TV+NLE
Sbjct: 118 AGTIKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVFKGMTMPGHLGAVRTTVQNLE 177

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           +V VD    ++LVKG +PGA KNS++++R++ K   N
Sbjct: 178 IVKVDVANNIMLVKGSIPGA-KNSYVMIREAVKGLPN 213


>gi|240145878|ref|ZP_04744479.1| 50S ribosomal protein L3 [Roseburia intestinalis L1-82]
 gi|257202027|gb|EEV00312.1| 50S ribosomal protein L3 [Roseburia intestinalis L1-82]
 gi|291535430|emb|CBL08542.1| LSU ribosomal protein L3P [Roseburia intestinalis M50/1]
 gi|291537926|emb|CBL11037.1| LSU ribosomal protein L3P [Roseburia intestinalis XB6B4]
          Length = 227

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/230 (39%), Positives = 124/230 (53%), Gaps = 23/230 (10%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G  +PVTVL    C V   +T++ +GY AVQV   + K K 
Sbjct: 1   MKKAILATKVGMTQIFNADGVLVPVTVLEAGPCSVTQIKTVENDGYSAVQVAYADKKEKV 60

Query: 61  VSK----------------PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
           VSK                   G F+   VS K+ + EF+ +  D+   +G V     F 
Sbjct: 61  VSKDANGKKEIRNRHGVNKAQMGHFAKAGVSGKRYVREFKFENADEY-KLGDVIKADIFA 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRA--THGVSISHRSHGSTGCRQDPGRVFKNKK 162
            G  +D T ++ GKGF GA+KR   G  R    HG S  HR  GS G    P RVFK K 
Sbjct: 120 EGDKIDATAISKGKGFQGAIKR--LGQHRGPMAHG-SKFHRHQGSNGACSSPSRVFKGKG 176

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           M G MG  +VT +NLEVV VD +  L+LVKG VPGAKK   + ++++ K+
Sbjct: 177 MPGHMGSVKVTTQNLEVVRVDAENNLLLVKGAVPGAKK-CMVTIKETVKA 225


>gi|37912950|gb|AAR05282.1| ribosomal protein L3 [uncultured marine gamma proteobacterium
           EB000-45B06]
 gi|40063177|gb|AAR38014.1| ribosomal protein L3 [uncultured marine bacterium 562]
          Length = 211

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 81/198 (40%), Positives = 120/198 (60%), Gaps = 3/198 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K GMT ++  +G  IPVT + +    +   +T  ++GY A  V +   K  N
Sbjct: 1   MSIGLIGKKSGMTRLFLEDGESIPVTAVSVCGNFLADIKTTSRDGYNAFVV-SKVNKSNN 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K    F+  +N+ P   L EFR   +  D + VG   +   F +GQ VDVTG + GKG
Sbjct: 60  VNKSKSEFYKKINLDPGI-LAEFRSGDEVADDMKVGKHLTADIFEIGQYVDVTGTSKGKG 118

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KRHNF    ATHG S+SHR+HGS G  Q PGRV+K KKM+G MG  + TV++L++
Sbjct: 119 YAGVIKRHNFAMQDATHGNSLSHRAHGSIGQCQTPGRVWKGKKMSGHMGNVQKTVQSLKI 178

Query: 180 VSVDDKRGLILVKGCVPG 197
           V +D +  ++ +KG VPG
Sbjct: 179 VDLDVENSVLYIKGAVPG 196


>gi|238922830|ref|YP_002936343.1| 50S ribosomal protein L3 [Eubacterium rectale ATCC 33656]
 gi|259646545|sp|C4ZBD4|RL3_EUBR3 RecName: Full=50S ribosomal protein L3
 gi|238874502|gb|ACR74209.1| 50S ribosomal protein L3 [Eubacterium rectale ATCC 33656]
 gi|291523732|emb|CBK89319.1| LSU ribosomal protein L3P [Eubacterium rectale DSM 17629]
 gi|291528802|emb|CBK94388.1| LSU ribosomal protein L3P [Eubacterium rectale M104/1]
          Length = 227

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/230 (40%), Positives = 125/230 (54%), Gaps = 23/230 (10%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK- 59
           M+  ++A K+GMT ++N +G  +PVTVL    C V   +T++ +GY AVQVG G+ K K 
Sbjct: 1   MKKAILATKIGMTQIFNADGVLVPVTVLEAGPCVVTQIKTVENDGYSAVQVGFGDKKEKV 60

Query: 60  ---------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
                           V+K   G F    VS K+ + EF+ +  D+   +        F 
Sbjct: 61  VEKDANGKKSVAHRHGVNKAQMGHFKKAGVSGKRFVREFKFENADEY-NLADEIKADIFA 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRA--THGVSISHRSHGSTGCRQDPGRVFKNKK 162
            G  VDVT ++ GKGF GA+KR   G  R    HG S  HR  GS G    P +VFK K 
Sbjct: 120 EGDKVDVTAISKGKGFQGAIKR--LGQHRGPMAHG-SKFHRHQGSNGACSSPSKVFKGKG 176

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           M G MG  +VT +NLEVV VD  + L+L+KG VPGAKK + I V+++ KS
Sbjct: 177 MPGHMGSVKVTTQNLEVVRVDADKNLLLIKGAVPGAKK-ALITVKETTKS 225


>gi|73748316|ref|YP_307555.1| 50S ribosomal protein L3 [Dehalococcoides sp. CBDB1]
 gi|147669096|ref|YP_001213914.1| 50S ribosomal protein L3 [Dehalococcoides sp. BAV1]
 gi|289432364|ref|YP_003462237.1| 50S ribosomal protein L3 [Dehalococcoides sp. GT]
 gi|109893426|sp|Q3ZZM4|RL3_DEHSC RecName: Full=50S ribosomal protein L3
 gi|189042842|sp|A5FRY9|RL3_DEHSB RecName: Full=50S ribosomal protein L3
 gi|73660032|emb|CAI82639.1| ribosomal protein L3 [Dehalococcoides sp. CBDB1]
 gi|146270044|gb|ABQ17036.1| LSU ribosomal protein L3P [Dehalococcoides sp. BAV1]
 gi|288946084|gb|ADC73781.1| 50S ribosomal protein L3 [Dehalococcoides sp. GT]
          Length = 205

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/218 (38%), Positives = 128/218 (58%), Gaps = 20/218 (9%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--V 58
           M  G++ +K+GMT ++  +G+  PVT++    C VV  +T  ++GY AVQ+G G+AK   
Sbjct: 1   MIQGIIGKKIGMTQIFQEDGKAQPVTLVEAGPCVVVQVKTEKQDGYEAVQLGYGKAKHIT 60

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKD---DDL--LPVGSVFSPSYFTVGQLVDVTG 113
             V    RGF             EF+V ++   DD+  + VG   + S F  G+ +D +G
Sbjct: 61  SAVKGQCRGFG------------EFKVLREVDVDDIAAVSVGDQITVSDFKDGEKIDASG 108

Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
           ++ G+GFSG +KR +F G   THG S  HR+ GS G    PGR++K K MAG MG   VT
Sbjct: 109 VSRGRGFSGVVKRWHFAGGPKTHGQSDRHRAPGSIGSTTTPGRIYKGKHMAGHMGNEAVT 168

Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           ++NL V+  D ++ L++VKG +PG  KN+ IL++ + K
Sbjct: 169 IRNLVVLKTDAEKNLLMVKGAIPGG-KNTIILIKKTGK 205


>gi|286142800|gb|ADC41430.1| ribosomal protein L3 [Streptomyces cinnamoneus]
          Length = 167

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/167 (46%), Positives = 100/167 (59%), Gaps = 1/167 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+    C V   RT D +GY +VQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPCVVTQVRTNDIDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   + + F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVELRTA-DASEYTLGQEITAAVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTV 166


>gi|91200667|emb|CAJ73718.1| strongly similar to 50S ribosomal protein L3 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 196

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/196 (40%), Positives = 118/196 (60%), Gaps = 3/196 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT +Y  EG  +PVT++    C V+  +TL  +GY AVQ+G  + K+K   +P  G  + 
Sbjct: 1   MTQIYTGEGALVPVTLIKAGPCNVLQVKTLGNDGYSAVQLGYKDKKIKRAKRPEIGHAAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
            ++ P + + E ++    D+  +G   +   F   +LVDV G++ GKGF+G MKR    G
Sbjct: 61  ASLLPGRFVKEVKLDTVSDI-HLGQAVTLDIFEDVKLVDVIGISKGKGFAGVMKRWGMKG 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
              THG S  HRS GS G   DPGRV + KKM G++G  RVT+KNL+VV VD ++ ++ V
Sbjct: 120 GPQTHG-STRHRSVGSVGAGTDPGRVIRGKKMPGQLGRERVTIKNLDVVKVDKEKNMLFV 178

Query: 192 KGCVPGAKKNSWILVR 207
           KG VPG  K S+++++
Sbjct: 179 KGAVPGY-KGSYLIIK 193


>gi|256420659|ref|YP_003121312.1| ribosomal protein L3 [Chitinophaga pinensis DSM 2588]
 gi|256035567|gb|ACU59111.1| ribosomal protein L3 [Chitinophaga pinensis DSM 2588]
          Length = 205

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/205 (38%), Positives = 116/205 (56%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT +++  GR+  VT++    C V   +T++ +GY A+QV  GE K KN  K
Sbjct: 3   GIIGKKIGMTSIFDQNGRQTAVTIIEAGPCVVTQVKTVETDGYNAIQVSFGEKKEKNTPK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
                F+  + SPK+ + EFR    D    +G   +   F  G+ +DV G + GKGF G 
Sbjct: 63  AELNHFAKASTSPKRFVKEFR--NPDVQKALGETITTEIFAEGETIDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH F G+  ATHG     R+ GS G    P RVFK  +MAG+ G  +V VK L++V +
Sbjct: 121 VKRHGFSGVGEATHGQHDRSRAPGSVGGSSYPSRVFKGMRMAGQTGNEQVKVKGLKIVKI 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             ++  ILV G VPG    S +L++
Sbjct: 181 FAEKNYILVSGSVPG-HNGSIVLIQ 204


>gi|291334061|gb|ADD93734.1| 50S ribosomal protein L3 [uncultured marine bacterium
           MedDCM-OCT-S05-C114]
          Length = 215

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/218 (40%), Positives = 130/218 (59%), Gaps = 7/218 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ +KLGM+ VY+ +   +PVT++    C ++  ++LDK+GY A+Q+G    K K 
Sbjct: 1   MNLELIGKKLGMSQVYDEDNNLVPVTIVEAGPCPILQVKSLDKDGYEAIQIGF-NPKGKA 59

Query: 61  VSKPMR---GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
            +KP +   G  S  NV P+    E R+ K +     GS  +   F+  ++VDV   T G
Sbjct: 60  PNKPNKCQIGKASKANVEPQHLSQEIRI-KGEHSFEQGSSLTVENFSDVKVVDVISTTKG 118

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF G +KR NFGG  A+HG S+ HR  GS G  Q PGRVFKNKKM G  G  + T +NL
Sbjct: 119 KGFQGVVKRWNFGGGPASHG-SMFHRRGGSYGLCQWPGRVFKNKKMPGHTGTAKRTTQNL 177

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           ++V +  ++ L+L+KG VPG+ K + + VR + KS V+
Sbjct: 178 QLVKILPEKNLLLIKGSVPGS-KGTILTVRVAKKSKVS 214


>gi|331004121|ref|ZP_08327601.1| 50S ribosomal protein L3 [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330411531|gb|EGG90941.1| 50S ribosomal protein L3 [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 225

 Score =  139 bits (350), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/226 (37%), Positives = 122/226 (53%), Gaps = 18/226 (7%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ARK+GMT +++  G  IPVTVL    C V   +T + +GY +VQV  G+ + K 
Sbjct: 1   MKKAILARKVGMTQIFDENGVLIPVTVLLAGPCVVTQVKTEENDGYNSVQVAYGQIRTKL 60

Query: 61  VSKPMRGFFSSVNVSP--------KKKLF-------EFRVQKDDDLLPVGSVFSPSYFTV 105
           V+K   G  +   +          K+++F       EF+ +   +  P   +     F  
Sbjct: 61  VNKAKAGHLAKAGIEKVVVENGDKKREIFTAGRFIREFKFENASEYAPKAEI-KADIFAA 119

Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
           G  +D T ++ GKGF GA+KRH       +HG S  HR  GS G   DP  VFK K M G
Sbjct: 120 GDKIDATAISKGKGFQGAIKRHGQSRGPMSHG-SKFHRHQGSNGSSSDPSHVFKGKGMPG 178

Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            MG  RVT +NLE+V VD  + LILVKG +PG+KK + I ++++ K
Sbjct: 179 HMGAKRVTTQNLEIVRVDADKNLILVKGSMPGSKK-ALITLKETVK 223


>gi|315652354|ref|ZP_07905346.1| 50S ribosomal protein L3 [Eubacterium saburreum DSM 3986]
 gi|315485477|gb|EFU75867.1| 50S ribosomal protein L3 [Eubacterium saburreum DSM 3986]
          Length = 225

 Score =  139 bits (350), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/226 (38%), Positives = 122/226 (53%), Gaps = 18/226 (7%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ARK+GMT +++  G  IPVTVL    C V   +T + +GY +VQV  G+ + K 
Sbjct: 1   MKKAILARKVGMTQIFDENGVLIPVTVLLAGPCVVTQVKTEENDGYNSVQVAYGQIRTKL 60

Query: 61  VSKPMRGFFSSVNVSP--------KKKLF-------EFRVQKDDDLLPVGSVFSPSYFTV 105
           V+K   G  +   +          K+++F       EF+ +   +  P   +     F  
Sbjct: 61  VNKAKAGHLAKAGIEKTVVEKGDKKREVFTAGRFIREFKFENASEYAPKAEI-KVDIFAA 119

Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
           G  VD T ++ GKGF GA+KRH       +HG S  HR  GS G   DP  VFK K M G
Sbjct: 120 GDKVDATAVSKGKGFQGAIKRHGQSRGPMSHG-SKFHRHQGSNGSSSDPSHVFKGKGMPG 178

Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            MG  RVT +NLE+V VD  R LILVKG +PG+KK + I ++++ K
Sbjct: 179 HMGAKRVTTQNLEIVRVDADRNLILVKGSMPGSKK-ALITLKETVK 223


>gi|321310980|ref|YP_004193309.1| 50S ribosomal protein L4 [Mycoplasma haemofelis str. Langford 1]
 gi|319802824|emb|CBY93470.1| ribosomal protein L3 [Mycoplasma haemofelis str. Langford 1]
          Length = 229

 Score =  139 bits (349), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 121/208 (58%), Gaps = 4/208 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           +V +KLGMT V++  G  IPVT + ++   ++  +T++K+GY AV VG G  K   +SKP
Sbjct: 4   IVGKKLGMTQVFSDSGTLIPVTAIEVEPNLILSLKTVEKDGYSAVVVGYGSVKETRLSKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           +RG F    +  ++ +FE R    D L     +   S F VG LVDV+G+T G GF+GA+
Sbjct: 64  VRGQFQKKGLEVRRNIFELRNSSQDGLKEGELLKVDSLFKVGDLVDVSGVTRGHGFTGAI 123

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQ---DPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           K  NF     +HG    HR  GS    +    P +V+K KKMAGR G  RV+  NLE+V 
Sbjct: 124 KLWNFSCGPRSHGAGYPHRYQGSLETGRGGVSPQKVWKGKKMAGRYGCERVSQINLEIVY 183

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
           VD ++ L+ VKG V G + NS + ++ +
Sbjct: 184 VDPEKNLLFVKGSVAG-RSNSIVRIKTT 210


>gi|116780926|gb|ABK21883.1| unknown [Picea sitchensis]
          Length = 303

 Score =  139 bits (349), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 109/199 (54%), Gaps = 2/199 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62
           GV+  KLGM   +   G+ +PVTV+      +V   +T   +GY AVQVG    + K ++
Sbjct: 89  GVMGTKLGMMSYFEPGGKFVPVTVVGFHEGNIVTQIKTEATDGYEAVQVGYRRVRDKKLT 148

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G  + V   P + L EFR+   D       +     F  G LVDV+G +IGKGF G
Sbjct: 149 KPEMGHLNKVGTIPMRHLQEFRLTSVDGFELSQRLTFEELFKEGDLVDVSGKSIGKGFQG 208

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHNF     +HG S SHR  GS G    PGRV+  KKM GRMGG +  ++ L+VV +
Sbjct: 209 GIKRHNFRRGPMSHG-SKSHRQLGSIGAGTTPGRVYPGKKMPGRMGGTKTKIRKLQVVKI 267

Query: 183 DDKRGLILVKGCVPGAKKN 201
           D +   +L+KG VPG   N
Sbjct: 268 DSELRTVLIKGAVPGKPGN 286


>gi|288929340|ref|ZP_06423185.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329442|gb|EFC68028.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 317 str. F0108]
          Length = 204

 Score =  139 bits (349), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 82/203 (40%), Positives = 119/203 (58%), Gaps = 4/203 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V++ +G+ +P TV+    C V   +T++ +GY AVQ+  GEAK    +K
Sbjct: 3   GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVETDGYKAVQLAYGEAKKNRTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
            M G F     +PKK L EF+   + +L   G   +   F   + VDV G + GKGF G 
Sbjct: 63  AMAGIFEKAGTTPKKHLAEFKFDTEYNL---GDTITVDLFEGAEFVDVVGTSKGKGFQGV 119

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ + THG     R  GS G    P +VFK  +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQTTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLKVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205
             +  LILVKG V G   ++ ++
Sbjct: 180 IPEHNLILVKGSVAGCNGSTLLI 202


>gi|308190095|ref|YP_003923026.1| 50S ribosomal protein L3 [Mycoplasma fermentans JER]
 gi|319777391|ref|YP_004137042.1| 50S ribosomal protein l3 [Mycoplasma fermentans M64]
 gi|307624837|gb|ADN69142.1| 50S ribosomal protein L3 [Mycoplasma fermentans JER]
 gi|318038466|gb|ADV34665.1| 50S ribosomal protein L3 [Mycoplasma fermentans M64]
          Length = 275

 Score =  139 bits (349), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 81/214 (37%), Positives = 121/214 (56%), Gaps = 6/214 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT ++   G  +PVTV+ +    V    + DKNGY+A Q+  GE K    +K
Sbjct: 3   GILGRKIGMTQIFTELGASVPVTVIEVQPNVVTKVLSADKNGYVATQIAVGEKKEHRSNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+    +PK+ + E R  +  +L   G     + F  G+LVD+TG + GKGF+G 
Sbjct: 63  PLKGQFAQAKTTPKRYVKEIRGMQGYEL---GQTIKANIFKAGELVDITGTSKGKGFAGT 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181
           +KR N      +HG     +    TG   D    RVFK   M G +G  R TV+NLE+V 
Sbjct: 120 IKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVFKGMTMPGHLGAVRTTVQNLEIVK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           VD    ++LVKG +PGA KNS++++R++ K   N
Sbjct: 180 VDVANNIMLVKGSIPGA-KNSYVMIREAVKGLPN 212


>gi|291320506|ref|YP_003515770.1| 50S ribosomal protein L3 [Mycoplasma agalactiae]
 gi|290752841|emb|CBH40816.1| 50S ribosomal protein L3 [Mycoplasma agalactiae]
          Length = 267

 Score =  139 bits (349), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 82/210 (39%), Positives = 123/210 (58%), Gaps = 6/210 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT +Y   G+RIPVTV+ +    V    T++KNGY+A Q+   E K K V++
Sbjct: 3   GILGRKVGMTQIYTELGQRIPVTVIEVKPNVVSKVLTVEKNGYVATQLATVEKKAKRVNR 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F     +PK+ + E R  +  +L   G   + S F+ G+LVD+TG++ GKGF+G 
Sbjct: 63  PLAGQFIQAKTTPKQYIKEIRGMEGYEL---GQEVNASIFSAGELVDITGISKGKGFAGT 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181
           +KR N      +HG     +    TG   D    RV K   M G +G  + TV+NLE+V 
Sbjct: 120 IKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVVKGMTMPGHLGSEKTTVQNLEIVK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           VD    L+LVKG +PGAKK S+++++ + K
Sbjct: 180 VDTVNNLLLVKGSIPGAKK-SFVIIKQAVK 208


>gi|187251822|ref|YP_001876304.1| 50S ribosomal protein L3 [Elusimicrobium minutum Pei191]
 gi|186971982|gb|ACC98967.1| Ribosomal protein L3 [Elusimicrobium minutum Pei191]
          Length = 259

 Score =  139 bits (349), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 82/196 (41%), Positives = 111/196 (56%), Gaps = 2/196 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           V+  K+GMT +++ +G    V+V+    C+VV  RT +K+GY AV +G GE K K ++KP
Sbjct: 32  VLGEKMGMTQLFDEKGNLHAVSVVKAGPCKVVRVRTQEKDGYTAVCLGFGEVKEKALNKP 91

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKGFSGA 123
             GFF     +P + + E RV  D     VG V S    F  G  VDV G   G+GF+GA
Sbjct: 92  ELGFFKKTTQAPVRHMKEHRVS-DVTGFEVGQVVSLDKIFKPGDYVDVQGKIKGRGFAGA 150

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G  A+HG S   R+ G    R+  G+V   ++MAG  G    TV  +EV+ VD
Sbjct: 151 MKRHGFAGQPASHGASDRERAPGGLASRRSLGKVLSGQRMAGHYGNTTQTVAKIEVIKVD 210

Query: 184 DKRGLILVKGCVPGAK 199
            +  LI +KG VPGAK
Sbjct: 211 SENNLIFLKGSVPGAK 226


>gi|215400772|ref|YP_002327533.1| ribosomal protein L3 [Vaucheria litorea]
 gi|194441222|gb|ACF70950.1| ribosomal protein L3 [Vaucheria litorea]
          Length = 196

 Score =  139 bits (349), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 76/190 (40%), Positives = 114/190 (60%), Gaps = 2/190 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V+  EG  +PVTV+ +  C V   +T   +GY A+Q+G  +  ++ ++K   G    
Sbjct: 1   MTQVFYKEGLAVPVTVIRIGPCLVTKIKTTTTDGYNAIQIGYCQVPIRKLTKGQLGHLKK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
           V + P K L E+   KD +   VG + + + F +GQLV+++G++IGKGFSG  KR+NF  
Sbjct: 61  VGLPPLKYLTEYNF-KDINEFYVGQILTINNFNLGQLVNISGLSIGKGFSGTCKRYNFKR 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
              THG S SH++ GS G    PGRVF  KKM G+ G  +VT+  L+++ +D +  L++V
Sbjct: 120 GPMTHG-SKSHKAPGSIGPGTTPGRVFPGKKMPGQHGNKKVTILKLKILGIDTEENLLVV 178

Query: 192 KGCVPGAKKN 201
           KG VPG   N
Sbjct: 179 KGSVPGKPGN 188


>gi|261880882|ref|ZP_06007309.1| 50S ribosomal protein L3 [Prevotella bergensis DSM 17361]
 gi|270332389|gb|EFA43175.1| 50S ribosomal protein L3 [Prevotella bergensis DSM 17361]
          Length = 204

 Score =  139 bits (349), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 80/203 (39%), Positives = 121/203 (59%), Gaps = 4/203 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V++ +G+ +P TV+    C V   +T++ +GY AVQ+G GEAK    +K
Sbjct: 3   GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVENDGYEAVQIGFGEAKKSRTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           PM G F     +PKK L EF+ ++D +L   G   +   F     V+V G + GKGF G 
Sbjct: 63  PMAGIFKKAGTTPKKHLAEFKFEEDYNL---GDAITVELFADADFVNVVGTSKGKGFQGV 119

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH F G+ + THG     R  GS G    P +VFK  +M G+MGG+RV  +NL+V+ V
Sbjct: 120 VKRHGFAGVGQRTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVKTRNLKVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205
             ++ L++VKG   G K ++ ++
Sbjct: 180 IPEQNLLIVKGSFAGCKGSTVLI 202


>gi|224542238|ref|ZP_03682777.1| hypothetical protein CATMIT_01413 [Catenibacterium mitsuokai DSM
           15897]
 gi|224524780|gb|EEF93885.1| hypothetical protein CATMIT_01413 [Catenibacterium mitsuokai DSM
           15897]
          Length = 227

 Score =  139 bits (349), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/220 (38%), Positives = 129/220 (58%), Gaps = 12/220 (5%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+  +G+ IPVTV+      V+  +T++ +GY A+QVG  + + K  +K
Sbjct: 3   GILGRKIGMTQVFATDGKLIPVTVIEATPNVVLQKKTVETDGYNAIQVGFEDKREKLANK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLL--PVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           P +G  +  N +PK+ + EFR    D+++   VG   S   F  G++VDVTG + GKG+ 
Sbjct: 63  PEKGVVAKANTAPKRFIKEFRF---DEMMSYEVGQTVSVDSFVAGEVVDVTGTSKGKGYQ 119

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRH        HG S +HR  GS G    P R+   K + G+MGGN  TV+NLE+V+
Sbjct: 120 GVIKRHGQHIGPKGHG-SGAHRIVGSMGPIA-PNRIAPGKNLPGQMGGNTRTVQNLEIVA 177

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
           VD ++ ++LV G VPG KK   ++     KS +   GK +
Sbjct: 178 VDVEKNVLLVSGSVPGPKKGLVVV-----KSGIKANGKTN 212


>gi|328955914|ref|YP_004373247.1| LSU ribosomal protein L3P [Coriobacterium glomerans PW2]
 gi|328456238|gb|AEB07432.1| LSU ribosomal protein L3P [Coriobacterium glomerans PW2]
          Length = 206

 Score =  138 bits (348), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/199 (44%), Positives = 115/199 (57%), Gaps = 2/199 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M S ++ RK+GMT V++     +PVTV+    C V   +T   +GY AVQ+G G+ + K+
Sbjct: 1   MVSMILGRKIGMTQVWDENDNVVPVTVIQAGPCYVSQVKTEATDGYDAVQIGFGDIRAKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++PM G F+   V P + L E RV   +    VG   + + F   + VDV G + GKGF
Sbjct: 61  VNRPMAGHFAKAGVEPVRYLREVRVPAGEQH-SVGDPVTVADFEGTEKVDVIGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR        THG S  HR  GS G    P RV K  KMAG MG +RVTVKNL VV
Sbjct: 120 QGRIKRWGQHRGPMTHG-SHFHRHPGSIGQCAYPSRVLKGLKMAGHMGNDRVTVKNLSVV 178

Query: 181 SVDDKRGLILVKGCVPGAK 199
            +D ++ LILVKG VPGAK
Sbjct: 179 RIDAEQNLILVKGAVPGAK 197


>gi|156363345|ref|XP_001626005.1| predicted protein [Nematostella vectensis]
 gi|156212865|gb|EDO33905.1| predicted protein [Nematostella vectensis]
          Length = 264

 Score =  138 bits (348), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 81/215 (37%), Positives = 123/215 (57%), Gaps = 7/215 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG----YMAVQVGA-GEA 56
           R+G V  KLGM+ ++  +GRR+PVT++ + +C+VV  R    +G       +QVGA  + 
Sbjct: 8   RTGAVGVKLGMSALWLKDGRRLPVTLIQIKDCEVVQARVAKGHGGRDPQTELQVGAVNKL 67

Query: 57  KVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116
           ++  + K   G F   +V PK+K+  F V  D  L P G+  + ++F  GQ V + G+T 
Sbjct: 68  ELNQIGKAQFGHFKRFSVRPKRKVCSFPVTPDALLTP-GTPITAAHFYPGQYVKIQGVTK 126

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
            KGF G MKR   GG  A+HG S +HR  G+TG  QDPGRV+  KKMAG MG    T+  
Sbjct: 127 DKGFQGVMKRWGMGGQPASHGQSKTHRKMGATGGGQDPGRVWPGKKMAGHMGNKNCTLHA 186

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           + V  ++ K  ++ V+G  PG     ++ + D++K
Sbjct: 187 VRVHRINTKYNVLYVQGQCPGP-TGGFLKISDAWK 220


>gi|254495341|ref|ZP_05108265.1| 50S ribosomal protein L3 [Polaribacter sp. MED152]
 gi|213690665|gb|EAQ40852.2| 50S ribosomal protein L3 [Polaribacter sp. MED152]
          Length = 195

 Score =  138 bits (348), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 81/197 (41%), Positives = 121/197 (61%), Gaps = 4/197 (2%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT +++  G+ IP TV+    C V   RT + +GY A+Q+G  + K K+ +K + G F  
Sbjct: 1   MTSLFDENGKNIPCTVIEAGPCVVTQVRTEEVDGYNALQLGFDDKKAKSSNKALDGHFKK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
              + KKK+ EF  Q  ++   +G   +  +FT G+ VDV+G + GKGF G +KRH FGG
Sbjct: 61  AGTTAKKKVVEF--QGFEEEYKLGDAITVEHFTEGEFVDVSGTSKGKGFQGVVKRHGFGG 118

Query: 132 L-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
           + +ATHG     R+ GS G    P RVFK  +MAGRMGG +V V+NL V+ V  ++ L++
Sbjct: 119 VGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGEKVKVQNLRVLKVVAEKNLLV 178

Query: 191 VKGCVPGAKKNSWILVR 207
           VKG VPG  KN+++ ++
Sbjct: 179 VKGAVPG-HKNAFVTIQ 194


>gi|323440070|gb|EGA97785.1| 50S ribosomal protein L3 [Staphylococcus aureus O11]
          Length = 209

 Score =  138 bits (348), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 89/208 (42%), Positives = 115/208 (55%), Gaps = 11/208 (5%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG--------AGEAKVKNVSK 63
           MT V+   G  IPVTV+      V+  +T++ +GY A+QVG              K  +K
Sbjct: 1   MTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYKKDAKSNKYANK 60

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G     + +PK+ + EFR   D D   VG   S   F  G ++DVTG++ GKGF GA
Sbjct: 61  PAEGHAKKADAAPKRFIREFR-NVDVDAYEVGQEVSVDTFVAGDVIDVTGVSKGKGFQGA 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KRH       +HG S  HR+ GS G   D  RVFK +KM GRMG N VTV+NLEVV VD
Sbjct: 120 IKRHGQSRGPMSHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGRNTVTVQNLEVVQVD 178

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +  +ILVKG VPG KK   + +R S K
Sbjct: 179 TENKVILVKGNVPGPKK-GLVEIRTSIK 205


>gi|254431244|ref|ZP_05044947.1| ribosomal protein L3 [Cyanobium sp. PCC 7001]
 gi|197625697|gb|EDY38256.1| ribosomal protein L3 [Cyanobium sp. PCC 7001]
          Length = 204

 Score =  138 bits (348), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 79/205 (38%), Positives = 119/205 (58%), Gaps = 3/205 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           M+  ++  G+ IPVTV+    C++   ++   +GY AVQ+G G+ + K V+KP +G  + 
Sbjct: 1   MSQFFDEAGKSIPVTVIEAGPCRITQIKSTGTDGYNAVQLGFGDIREKLVNKPAQGHLAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
                 + L E+RV   D L  +G   + + F  GQ VDV+G T+G+GF+G  KRH F  
Sbjct: 61  SGEELLRHLKEYRVDSLDGL-ELGGAVTVAAFEPGQKVDVSGDTMGRGFAGYQKRHGFSR 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
              THG S +HR  GSTG    PGRV+  K+MAGR GG + T + L ++ VD +R L++V
Sbjct: 120 GPMTHG-SKNHREPGSTGAGTTPGRVYPGKRMAGRYGGKQTTTRGLVILKVDTERNLLVV 178

Query: 192 KGCVPGAKKNSWILVRDSFKSAVNC 216
           KG VPG K  + + +R + +   N 
Sbjct: 179 KGSVPG-KPGALLNIRPANRVGANA 202


>gi|189460684|ref|ZP_03009469.1| hypothetical protein BACCOP_01331 [Bacteroides coprocola DSM 17136]
 gi|189432643|gb|EDV01628.1| hypothetical protein BACCOP_01331 [Bacteroides coprocola DSM 17136]
          Length = 205

 Score =  138 bits (348), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 82/205 (40%), Positives = 124/205 (60%), Gaps = 3/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   ++++K+GY AVQVG  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQVGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PK+ L EF+   ++  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKRHLAEFKDFSEE--LNLGDTITVELFNDASYVDVIGTSKGKGFQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ + THG     R  GS G    P +VFK  +M G+MGG+RVT  NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTHNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  L+L+KG VPG K +  I+ +
Sbjct: 181 IPEHNLLLIKGSVPGCKGSIVIIEK 205


>gi|286142684|gb|ADC41372.1| ribosomal protein L3 [Streptomyces californicus]
 gi|286142700|gb|ADC41380.1| ribosomal protein L3 [Streptomyces vinaceus]
 gi|286142714|gb|ADC41387.1| ribosomal protein L3 [Streptomyces floridae]
 gi|286142746|gb|ADC41403.1| ribosomal protein L3 [Streptomyces sp. CB157]
 gi|286142798|gb|ADC41429.1| ribosomal protein L3 [Streptomyces puniceus]
          Length = 167

 Score =  138 bits (347), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 75/167 (44%), Positives = 100/167 (59%), Gaps = 1/167 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+    C V   RT D +GY AVQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   + + F  G  VDVTG + GKGF+G MKRHNF G 
Sbjct: 61  DVTPRRHLVELRT-PDASEYTLGQEVTAAVFESGVKVDVTGKSKGKGFAGVMKRHNFKGG 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           +A+HG    HR  GS G    PGRVFK  +MAGRMG  RVT +NL +
Sbjct: 120 KASHGAHRVHRMPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTI 166


>gi|297582450|ref|YP_003698230.1| 50S ribosomal protein L3 [Bacillus selenitireducens MLS10]
 gi|297140907|gb|ADH97664.1| 50S ribosomal protein L3 [Bacillus selenitireducens MLS10]
          Length = 208

 Score =  138 bits (347), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 119/212 (56%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT +++  G ++PVTV+      V+  +T +  GY A+Q+G  + K   
Sbjct: 1   MTKGILGKKLGMTQIFSENGEQVPVTVIEASPNVVLQKKTAEGEGYEAIQIGYDDKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            + P +G       +PK+ + E R     D   +G       F  G  +DVTG + GKGF
Sbjct: 61  QNSPEKGHAEKAKTAPKRFVKEIRDVNTADY-EIGQEIKVDIFAEGDAIDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRHN      +HG S  HR  GS G   DP  V   K + G+MGG  VT++NLEVV
Sbjct: 120 QGAIKRHNQSRGPMSHG-SRYHRRPGSMGPV-DPNHVRPGKLLPGQMGGETVTIQNLEVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R +ILVKG VPGA+K S++ +  + K+
Sbjct: 178 KVDTERNVILVKGNVPGARK-SFVTITSATKA 208


>gi|116748990|ref|YP_845677.1| 50S ribosomal protein L3 [Syntrophobacter fumaroxidans MPOB]
 gi|166990941|sp|A0LIJ0|RL3_SYNFM RecName: Full=50S ribosomal protein L3
 gi|116698054|gb|ABK17242.1| LSU ribosomal protein L3P [Syntrophobacter fumaroxidans MPOB]
          Length = 210

 Score =  138 bits (347), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   +V RKL M+ ++  +G  +P+T++    C V   +T +++GY A+Q+G G  K KN
Sbjct: 1   MIKAIVGRKLQMSQIFAEDGTAVPITLIQAGPCTVTQVKTPERDGYSALQIGFGSRKPKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+G    V     + L E R++   D   VG   +   F +G+ +DV G T GKG+
Sbjct: 61  VNKPMKGHLDKVGKGYFEVLREIRMENASD-HEVGEDLAADVFEIGERIDVIGTTKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR  F    + HG S + R  GSTG    PGRV K KKM G+ G  R TV NL ++
Sbjct: 120 AGTIKRWGFQRGPSGHG-SKNIREPGSTGNATFPGRVIKGKKMPGQKGNKRTTVMNLRII 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  +  L++VKG VPG+ +N  +L+R + ++
Sbjct: 179 DVRPEENLLIVKGAVPGS-QNGIVLIRKTNRA 209


>gi|260909750|ref|ZP_05916444.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 472 str. F0295]
 gi|260636175|gb|EEX54171.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 472 str. F0295]
          Length = 204

 Score =  138 bits (347), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 82/203 (40%), Positives = 119/203 (58%), Gaps = 4/203 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V++ +G+ +P TV+    C V   +T++ +GY AVQ+  GEAK    +K
Sbjct: 3   GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVETDGYNAVQLAYGEAKKNRTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
            M G F     +PKK L EF+   + +L   G   +   F   + VDV G + GKGF G 
Sbjct: 63  AMAGIFDKAGTTPKKHLAEFKFDTEYNL---GDTITVDLFEGAEFVDVVGTSKGKGFQGV 119

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ + THG     R  GS G    P +VFK  +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQTTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLKVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205
             +  LILVKG V G   ++ ++
Sbjct: 180 IPEHNLILVKGSVAGCNGSTLLI 202


>gi|286142596|gb|ADC41328.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142598|gb|ADC41329.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142718|gb|ADC41389.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142722|gb|ADC41391.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142724|gb|ADC41392.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142728|gb|ADC41394.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142732|gb|ADC41396.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142734|gb|ADC41397.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142736|gb|ADC41398.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142738|gb|ADC41399.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142740|gb|ADC41400.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142758|gb|ADC41409.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142766|gb|ADC41413.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142768|gb|ADC41414.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142782|gb|ADC41421.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142786|gb|ADC41423.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142788|gb|ADC41424.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142792|gb|ADC41426.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142794|gb|ADC41427.1| ribosomal protein L3 [Streptomyces griseus]
          Length = 167

 Score =  138 bits (347), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 77/167 (46%), Positives = 98/167 (58%), Gaps = 1/167 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+      V   RT D +GY AVQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGANVVTQVRTNDTDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVEIRTA-DASEYTLGQELNADTFEAGLKVDVTGKSKGKGFAGVMKRHNFKGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTV 166


>gi|291460718|ref|ZP_06600108.1| 50S ribosomal protein L3 [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291416677|gb|EFE90396.1| 50S ribosomal protein L3 [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 209

 Score =  137 bits (346), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 120/212 (56%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT +++  G  IPVTVL    C V   +TL+ +GY AVQVG  + + + 
Sbjct: 1   MKKAILAIKVGMTQIWDENGILIPVTVLQAGPCVVTQVKTLENDGYKAVQVGFQDKRERL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++P +G F    V  K+ + EFR +  ++  P   + +   F  G  VDVT ++ GKGF
Sbjct: 61  VNRPEKGQFDKAGVPCKRFVREFRFENSEEYKPKDEIKA-DIFAAGDKVDVTAVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
             A++++        HG S  HR  GS G    P RV   K M   MG  RVT +NL VV
Sbjct: 120 QSAIRKYGQHRGPMAHG-SKFHRHQGSNGTSATPSRVLPGKGMPSHMGAVRVTTQNLSVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD + GLIL+KG VPG KK + + V+++ K+
Sbjct: 179 RVDAENGLILIKGAVPGPKK-ALVTVKEAVKA 209


>gi|148377809|ref|YP_001256685.1| 50S ribosomal protein L3 [Mycoplasma agalactiae PG2]
 gi|226730538|sp|A5IYY6|RL3_MYCAP RecName: Full=50S ribosomal protein L3
 gi|148291855|emb|CAL59245.1| 50S ribosomal protein L3 [Mycoplasma agalactiae PG2]
          Length = 267

 Score =  137 bits (346), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 82/210 (39%), Positives = 122/210 (58%), Gaps = 6/210 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT +Y   G+RIPVTV+ +    V    T++KNGY A Q+   E K K V++
Sbjct: 3   GILGRKVGMTQIYTELGQRIPVTVVEVKPNVVSKVLTVEKNGYFATQLATVEKKAKRVNR 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F     +PK+ + E R  +  +L   G   + S F+ G+LVD+TG++ GKGF+G 
Sbjct: 63  PLAGQFIQAKTTPKQYIKEIRGMEGYEL---GQEVNASIFSAGELVDITGISKGKGFAGT 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181
           +KR N      +HG     +    TG   D    RV K   M G +G  + TV+NLE+V 
Sbjct: 120 IKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVVKGMTMPGHLGSEKTTVQNLEIVK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           VD    L+LVKG +PGAKK S+++++ + K
Sbjct: 180 VDTVNNLLLVKGSIPGAKK-SFVIIKQAVK 208


>gi|224023618|ref|ZP_03641984.1| hypothetical protein BACCOPRO_00325 [Bacteroides coprophilus DSM
           18228]
 gi|224016840|gb|EEF74852.1| hypothetical protein BACCOPRO_00325 [Bacteroides coprophilus DSM
           18228]
          Length = 205

 Score =  137 bits (346), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 82/205 (40%), Positives = 124/205 (60%), Gaps = 3/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   ++++K+GY AVQVG  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQVGFQDMKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PK+ L EF+   ++  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKRHLAEFKDFSEE--LNLGDTITVELFNDANYVDVIGTSKGKGFQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ + THG     R  GS G    P +VFK  +M G+MGG+RVT  NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTHNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  L+L+KG VPG K +  I+ +
Sbjct: 181 IPEHNLLLIKGSVPGYKGSIVIIEK 205


>gi|325108615|ref|YP_004269683.1| 50S ribosomal protein L3P [Planctomyces brasiliensis DSM 5305]
 gi|324968883|gb|ADY59661.1| LSU ribosomal protein L3P [Planctomyces brasiliensis DSM 5305]
          Length = 231

 Score =  137 bits (346), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 89/230 (38%), Positives = 125/230 (54%), Gaps = 20/230 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT VY   G  +PVTVL +  C V+  RTLD++GY AVQ+G G+   + 
Sbjct: 1   MPVGLLGRKVGMTQVYEEGGVVVPVTVLEVGPCPVLQVRTLDRDGYEAVQLGFGDKPRRL 60

Query: 61  VSKPMRG-------------------FFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS 101
            ++  RG                     +  +  P++ + EFR   +   + VG V +  
Sbjct: 61  ATRGERGHVAEISSKRRKARQEAGVELLAKADCEPQRYVREFRTDGESLDIEVGKVLTVE 120

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F     VDV   + G+G +G MKRHNF G RA+HGV   HR+ GS G   DP RV K  
Sbjct: 121 QFAEISNVDVVATSKGRGTAGVMKRHNFAGQRASHGVKKVHRAPGSIGQSADPSRVLKGT 180

Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +MAG+ G  RVTV+NL+V  +  +  L+LVKG VPG     ++LVR + K
Sbjct: 181 RMAGQYGNARVTVRNLKVARIVAEENLLLVKGAVPGP-SGGYVLVRPTNK 229


>gi|57234686|ref|YP_181218.1| 50S ribosomal protein L3 [Dehalococcoides ethenogenes 195]
 gi|109893425|sp|Q3Z981|RL3_DEHE1 RecName: Full=50S ribosomal protein L3
 gi|57225134|gb|AAW40191.1| ribosomal protein L3 [Dehalococcoides ethenogenes 195]
          Length = 205

 Score =  137 bits (346), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 82/218 (37%), Positives = 129/218 (59%), Gaps = 20/218 (9%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--V 58
           M  G++ +K+GMT ++  +G+  PVT++    C VV  +T  ++GY AVQ+G G+AK   
Sbjct: 1   MIQGIIGKKIGMTQIFQEDGKAQPVTLVEAGPCVVVQVKTEKQDGYEAVQLGYGKAKHIT 60

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKD---DDL--LPVGSVFSPSYFTVGQLVDVTG 113
             V    RGF             EF+V ++   DD+  + VG   + S F  G+ +D +G
Sbjct: 61  SAVKGQCRGFG------------EFKVLREVDVDDIAAVNVGDQITVSDFKDGEKIDASG 108

Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
           ++ G+GF+G +KR +F G   THG S  HR+ GS      PGR++K K+MAG MG + VT
Sbjct: 109 VSRGRGFAGVVKRWHFAGGPKTHGQSDRHRAPGSISSTTTPGRIYKGKRMAGHMGNDAVT 168

Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           ++NL V+  D ++ L++VKG +PG  KN+ IL++ + K
Sbjct: 169 IRNLVVLKTDAEKNLLMVKGAIPGG-KNTIILIKKTGK 205


>gi|302822169|ref|XP_002992744.1| hypothetical protein SELMODRAFT_430901 [Selaginella moellendorffii]
 gi|300139485|gb|EFJ06225.1| hypothetical protein SELMODRAFT_430901 [Selaginella moellendorffii]
          Length = 222

 Score =  137 bits (346), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 110/199 (55%), Gaps = 2/199 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62
           GV+  K+GM   +  +GR IPVTV+      +V   +T   +GY AVQVG    +   ++
Sbjct: 8   GVMGTKVGMMTHFMPDGRAIPVTVIGFHEGNIVTQVKTEPTDGYNAVQVGYLRVRDTKLT 67

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G  + +   P + L EFR+   D       +     F VG LVDV+G +IGKGF G
Sbjct: 68  KPELGHLNKIGTIPMRHLQEFRLVSVDGFELSQRLNVEDIFKVGDLVDVSGKSIGKGFQG 127

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHNF     THG S SHR  GS G    PGRV+  KKM GRMG  +  ++ LE++ +
Sbjct: 128 GIKRHNFKRGPMTHG-SKSHRQLGSIGAGTTPGRVYPGKKMPGRMGFQKTKIRKLEIIKI 186

Query: 183 DDKRGLILVKGCVPGAKKN 201
           D +   +LVKG VPG + N
Sbjct: 187 DPELRAVLVKGAVPGKRGN 205


>gi|270307842|ref|YP_003329900.1| ribosomal protein L3 [Dehalococcoides sp. VS]
 gi|270153734|gb|ACZ61572.1| ribosomal protein L3 [Dehalococcoides sp. VS]
          Length = 205

 Score =  137 bits (346), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 82/218 (37%), Positives = 129/218 (59%), Gaps = 20/218 (9%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--V 58
           M  G++ +K+GMT ++  +G+  PVT++    C VV  +T  ++GY AVQ+G G+AK   
Sbjct: 1   MIQGIIGKKIGMTQIFQEDGKAQPVTLVEAGPCVVVQVKTEKQDGYEAVQLGYGKAKHIT 60

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKD---DDL--LPVGSVFSPSYFTVGQLVDVTG 113
             V    RGF             EF+V ++   DD+  + VG   + S F  G+ +D +G
Sbjct: 61  SAVKGQCRGFG------------EFKVLREVDVDDIATVNVGDQITVSDFKDGEKIDASG 108

Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
           ++ G+GF+G +KR +F G   THG S  HR+ GS      PGR++K K+MAG MG + VT
Sbjct: 109 VSRGRGFAGVVKRWHFAGGPKTHGQSDRHRAPGSISSTTTPGRIYKGKRMAGHMGNDAVT 168

Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           ++NL V+  D ++ L++VKG +PG  KN+ IL++ + K
Sbjct: 169 IRNLVVLKTDAEKNLLMVKGAIPGG-KNTIILIKKTGK 205


>gi|150003387|ref|YP_001298131.1| 50S ribosomal protein L3 [Bacteroides vulgatus ATCC 8482]
 gi|212695305|ref|ZP_03303433.1| hypothetical protein BACDOR_04845 [Bacteroides dorei DSM 17855]
 gi|237711673|ref|ZP_04542154.1| 50S ribosomal protein L3 [Bacteroides sp. 9_1_42FAA]
 gi|237725885|ref|ZP_04556366.1| 50S ribosomal protein L3 [Bacteroides sp. D4]
 gi|254881322|ref|ZP_05254032.1| 50S ribosomal protein L3 [Bacteroides sp. 4_3_47FAA]
 gi|265753093|ref|ZP_06088662.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_33FAA]
 gi|294777821|ref|ZP_06743265.1| 50S ribosomal protein L3 [Bacteroides vulgatus PC510]
 gi|319640324|ref|ZP_07995049.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_40A]
 gi|166233118|sp|A6KYJ5|RL3_BACV8 RecName: Full=50S ribosomal protein L3
 gi|149931811|gb|ABR38509.1| 50S ribosomal protein L3 [Bacteroides vulgatus ATCC 8482]
 gi|212662215|gb|EEB22789.1| hypothetical protein BACDOR_04845 [Bacteroides dorei DSM 17855]
 gi|229435693|gb|EEO45770.1| 50S ribosomal protein L3 [Bacteroides dorei 5_1_36/D4]
 gi|229454368|gb|EEO60089.1| 50S ribosomal protein L3 [Bacteroides sp. 9_1_42FAA]
 gi|254834115|gb|EET14424.1| 50S ribosomal protein L3 [Bacteroides sp. 4_3_47FAA]
 gi|263236279|gb|EEZ21774.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_33FAA]
 gi|294448275|gb|EFG16831.1| 50S ribosomal protein L3 [Bacteroides vulgatus PC510]
 gi|317388099|gb|EFV68953.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_40A]
          Length = 205

 Score =  137 bits (346), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 82/205 (40%), Positives = 124/205 (60%), Gaps = 3/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   ++++K+GY AVQVG  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQVGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PK+ L EF+  + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKRHLAEFKDFETE--LNLGDTITVELFNDAAYVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ + THG     R  GS G    P +VFK  +M G+MGG+RVT  NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTHNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  L+L+KG VPG K +  I+ +
Sbjct: 181 IPEHNLLLIKGSVPGCKGSIVIIEK 205


>gi|255085138|ref|XP_002505000.1| ribosomal protein L3, chloroplast precursor [Micromonas sp. RCC299]
 gi|226520269|gb|ACO66258.1| ribosomal protein L3, chloroplast precursor [Micromonas sp. RCC299]
          Length = 276

 Score =  137 bits (345), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 85/200 (42%), Positives = 114/200 (57%), Gaps = 6/200 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62
           GV   K GMT ++  EG  IPV+V+ +    VV   +T+D +GY AVQV   E     ++
Sbjct: 67  GVFGNKAGMTQIFTDEGLCIPVSVIAVQKGNVVTQVKTVDTDGYNAVQVAYDEVADYKIT 126

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFS 121
           KP  G  +   V+P + L EFR+ +      +G    PS  FT G LVDV G +IGKG+ 
Sbjct: 127 KPEVGHCAKAGVAPMRHLEEFRLAQAP-AHELGQQLKPSEMFTAGDLVDVRGASIGKGWQ 185

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           GA+K++ F     THG S SHR HGS G    PGR++  KKM  +MG   VT + L+VV 
Sbjct: 186 GAVKKYGFSRGLMTHG-SKSHRQHGSVGAGTTPGRIYPGKKMHSQMGNETVTARKLKVVK 244

Query: 182 VDDKRGLILVKGCVPGAKKN 201
           V+D    I+VKG VPG + N
Sbjct: 245 VEDD--CIIVKGSVPGKRGN 262


>gi|225376409|ref|ZP_03753630.1| hypothetical protein ROSEINA2194_02051 [Roseburia inulinivorans DSM
           16841]
 gi|225211785|gb|EEG94139.1| hypothetical protein ROSEINA2194_02051 [Roseburia inulinivorans DSM
           16841]
          Length = 227

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/230 (38%), Positives = 127/230 (55%), Gaps = 23/230 (10%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52
           M+  ++A K+GMT ++N +G  +PVTVL    C V   +T++ +GY AVQV         
Sbjct: 1   MKKAILATKVGMTQIFNADGVLVPVTVLEAGPCSVTQIKTVENDGYSAVQVAFADKKERI 60

Query: 53  -----AGEAKVKN---VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
                 G+ +++N   V+K   G F+   VS K+ + EF+ +   +   +G V     F 
Sbjct: 61  VNKDANGKKEIRNRHGVNKAQMGHFAKAGVSGKRFVKEFKFENAAEY-NLGDVIKADIFA 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRA--THGVSISHRSHGSTGCRQDPGRVFKNKK 162
            G  +D T ++ GKGF GA+KR  FG  R    HG S  HR  GS G    P RVFK K 
Sbjct: 120 EGDKIDATAISKGKGFQGAIKR--FGQHRGPMAHG-SKFHRHQGSNGACSSPSRVFKGKG 176

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           M G MG  +VT +NLEVV VD +  L+LVKG VPGAKK   + ++++ K+
Sbjct: 177 MPGHMGSVKVTTQNLEVVRVDAENNLLLVKGAVPGAKK-CLVTIKETVKA 225


>gi|108804974|ref|YP_644911.1| 50S ribosomal protein L3P [Rubrobacter xylanophilus DSM 9941]
 gi|123368030|sp|Q1AU29|RL3_RUBXD RecName: Full=50S ribosomal protein L3
 gi|108766217|gb|ABG05099.1| LSU ribosomal protein L3P [Rubrobacter xylanophilus DSM 9941]
          Length = 205

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/209 (40%), Positives = 117/209 (55%), Gaps = 6/209 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M + V ARK  MT  +  +G  + VTVL ++   V   +T +K+GY AVQVG G  K   
Sbjct: 1   MATAVFARKKYMTQAFQDDGTAVGVTVLEVEPNVVTAVKTAEKDGYEAVQVGFGAVKSGR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++P  G F+ +++ P++ L E R    +    VG       F  G  V V+  + G+GF
Sbjct: 61  VNRPHAGVFAKLDIPPRRYLRELRGVSGE----VGQTIGADAFEAGDRVHVSARSKGRGF 116

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH FG    THG S + R  GS G   DP R+FK ++M G MG   VTV+NLEVV
Sbjct: 117 QGTVKRHGFGRGPVTHG-SHNIRQPGSVGASADPSRIFKGQRMPGHMGDRSVTVRNLEVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            VD +R  I V+G VPG  +N+ + VR +
Sbjct: 176 RVDAERNEIWVRGGVPGG-RNAIVKVRKA 203


>gi|295107591|emb|CBL05134.1| LSU ribosomal protein L3P [Gordonibacter pamelaeae 7-10-1-b]
          Length = 206

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/207 (43%), Positives = 122/207 (58%), Gaps = 3/207 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M + +  +K+GMT ++  + R +PVTV+  +  +V   +T   +GY AVQ+G G  K K 
Sbjct: 1   MINAIYGKKIGMTQIFGEDDRVVPVTVIQAEPNKVCQVKTKATDGYEAVQMGFGAIKEKK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+G F     +P + L E RV+   +   VG   + + F   + VDVTG + GKGF
Sbjct: 61  VNKPMKGHFEKQGAAPVRYLREVRVENAGEY-NVGDEQTVAAFAETKKVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR+ F G    HG    HR+ GS G    P RVFK  K+ G MG + VTVKNLEVV
Sbjct: 120 AGVMKRYGFRGGPGGHGAHF-HRAPGSVGQCATPSRVFKGLKLPGHMGCDTVTVKNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207
            VD+ + LILVKG VPG  KN  + VR
Sbjct: 179 RVDEDQNLILVKGAVPGG-KNGIVRVR 204


>gi|198274003|ref|ZP_03206535.1| hypothetical protein BACPLE_00139 [Bacteroides plebeius DSM 17135]
 gi|198273081|gb|EDY97350.1| hypothetical protein BACPLE_00139 [Bacteroides plebeius DSM 17135]
          Length = 205

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/205 (40%), Positives = 124/205 (60%), Gaps = 3/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   ++++K+GY AVQVG  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQVGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PK+ L EF+   ++  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKRHLAEFKDFSEE--LNLGDTITVELFNDTAYVDVIGTSKGKGFQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ + THG     R  GS G    P +VFK  +M G+MGG+RVT  NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTHNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  L+L+KG VPG K +  I+ +
Sbjct: 181 IPEHNLLLIKGSVPGCKGSIVIIEK 205


>gi|42559212|sp|Q7XYP4|RK3_BIGNA RecName: Full=50S ribosomal protein L3, chloroplastic; Flags:
           Precursor
 gi|32307490|gb|AAP79150.1| ribosomal protein rpL3 [Bigelowiella natans]
          Length = 302

 Score =  137 bits (344), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/201 (40%), Positives = 113/201 (56%), Gaps = 3/201 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVK 59
           ++ G++  K GMT  Y+ EG   PVTV+ L+   VV   +T + +GY AVQ+   E + +
Sbjct: 87  IKMGLMGTKAGMTTYYDDEGIAHPVTVIALEAGNVVTQVKTKETDGYDAVQLAYKETRDR 146

Query: 60  NVSKPMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
            +  P R       NV   K L EF++    +  P   + +   F VG LVDV+G + GK
Sbjct: 147 TIPWPERQHLRKHGNVKAMKHLKEFKIADVSEFTPGQQLKAEELFEVGDLVDVSGTSSGK 206

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G+++R        +HG S SHR HGS GC   P RV+K  KMAGRMG  R TVK L 
Sbjct: 207 GFQGSIRRWGMKRGPMSHG-SKSHRQHGSIGCSATPSRVYKGLKMAGRMGNERKTVKKLP 265

Query: 179 VVSVDDKRGLILVKGCVPGAK 199
           V+ V+D+   I+V+G VPG K
Sbjct: 266 VMMVNDEEKYIVVRGSVPGKK 286


>gi|1185166|emb|CAA91649.1| 50S ribosomal protein L3 [Odontella sinensis]
          Length = 196

 Score =  137 bits (344), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/190 (40%), Positives = 108/190 (56%), Gaps = 2/190 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT +++  G  IPVT+L +  C +   +T   +GY A+Q+G G    K++++P  G    
Sbjct: 1   MTQIFDESGNIIPVTILKVGPCVITQVKTDLNDGYNAIQIGYGTVSNKSLTQPELGHLQK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
            N+ P K L EFRV   ++   VG V +    + GQ +DVTG + GKGFSG  KRHNF  
Sbjct: 61  SNIQPLKYLKEFRVNNPEEF-KVGQVVNVESLSTGQFIDVTGKSSGKGFSGLQKRHNFTR 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
              THG S +HR+ GS G    PGRV   KKMAG++G      K L+++ V+    +++V
Sbjct: 120 GPMTHG-SKNHRAPGSIGMGTTPGRVLPGKKMAGQLGNKVTKTKKLKIIQVNGNENILVV 178

Query: 192 KGCVPGAKKN 201
           KG VPG   N
Sbjct: 179 KGSVPGKPGN 188


>gi|261409521|ref|YP_003245762.1| 50S ribosomal protein L3 [Paenibacillus sp. Y412MC10]
 gi|329922035|ref|ZP_08277828.1| 50S ribosomal protein L3 [Paenibacillus sp. HGF5]
 gi|261285984|gb|ACX67955.1| 50S ribosomal protein L3 [Paenibacillus sp. Y412MC10]
 gi|328942418|gb|EGG38682.1| 50S ribosomal protein L3 [Paenibacillus sp. HGF5]
          Length = 207

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/208 (40%), Positives = 118/208 (56%), Gaps = 4/208 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT V+  EG  IPVTV+    C V+  + L+ +GY A+QVG  + K    +K
Sbjct: 3   GILGRKLGMTQVFTPEGVVIPVTVIEAGPCVVLQKKDLENDGYEAIQVGFSDKKENRSNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G     N +PK+ + E R   D   + VG       F  G+ VDVTG++ GKGF G 
Sbjct: 63  PEAGHAKKANTAPKRYVREIR-GVDLASVEVGQELKADVFAEGEFVDVTGISKGKGFQGV 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR        +HG S  HR  GS G  Q   RV K K++ G MG   VT++ LEVV VD
Sbjct: 122 IKRWGQSRGPMSHG-SRYHRRPGSMGSIQ-ANRVPKGKRLPGHMGNETVTIQKLEVVKVD 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +R +ILVKG +PG KK  ++ ++++ K
Sbjct: 180 AERNVILVKGSIPGPKK-GFVQIKETVK 206


>gi|286142620|gb|ADC41340.1| ribosomal protein L3 [Streptomyces griseoruber]
          Length = 167

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/167 (45%), Positives = 98/167 (58%), Gaps = 1/167 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPNVVTQVRTNDADGYESVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVEIRTA-DASEYTLGQEITAEVFEAGIKVDVTGKSKGKGFAGVMKRHNFKGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTV 166


>gi|315649699|ref|ZP_07902783.1| 50S ribosomal protein L3 [Paenibacillus vortex V453]
 gi|315274887|gb|EFU38263.1| 50S ribosomal protein L3 [Paenibacillus vortex V453]
          Length = 207

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/208 (40%), Positives = 118/208 (56%), Gaps = 4/208 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT V+  EG  IPVTV+    C V+  + L+ +GY A+QVG  + K    +K
Sbjct: 3   GILGRKLGMTQVFTPEGIVIPVTVIEAGPCVVLQKKDLENDGYEAIQVGFSDKKENRSNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G     N +PK+ + E R   D   + VG       F  G+ VDVTG++ GKGF G 
Sbjct: 63  PEAGHAKKANTAPKRYVREIR-GVDLASVEVGQELKADVFAEGEFVDVTGISKGKGFQGV 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR        +HG S  HR  GS G  Q   RV K K++ G MG   VT++ LEVV VD
Sbjct: 122 IKRWGQSRGPMSHG-SRYHRRPGSMGSIQ-ANRVPKGKRLPGHMGNETVTIQKLEVVRVD 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +R +ILVKG +PG KK  ++ ++++ K
Sbjct: 180 AERNVILVKGSIPGPKK-GFVQIKETVK 206


>gi|229496170|ref|ZP_04389890.1| 50S ribosomal protein L3 [Porphyromonas endodontalis ATCC 35406]
 gi|229316748|gb|EEN82661.1| 50S ribosomal protein L3 [Porphyromonas endodontalis ATCC 35406]
          Length = 205

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/197 (39%), Positives = 113/197 (57%), Gaps = 3/197 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G   P TV+ L  C V   +T + +GY A+Q+G  E   K+ +K
Sbjct: 3   GLLGKKIGMTSVFSADGVNTPCTVIELGPCVVTQVKTSEHDGYDALQLGFQETTEKHATK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+P + L EF+    D  L  G       F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVAPMRHLAEFKGFSGDYKL--GDTIKVDIFENVVYVDVIGTSKGKGFQGV 120

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           + RH FGG+ ++THG     R+ G+ G    P +VFK  +MAG+ G  RVTV+NLEV+ V
Sbjct: 121 VGRHGFGGVGQSTHGQHNRLRAPGAVGACSYPAKVFKGTRMAGQTGNERVTVQNLEVIKV 180

Query: 183 DDKRGLILVKGCVPGAK 199
             +  L+L+KG +PG K
Sbjct: 181 MPEHNLLLIKGSIPGHK 197


>gi|324528045|gb|ADY48869.1| 50S ribosomal protein L3 [Ascaris suum]
          Length = 231

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/213 (37%), Positives = 126/213 (59%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RKLGM+ ++  +G  IPVT++ ++   +   +T + +GY A+Q+G  + K K+
Sbjct: 1   MMKGLVGRKLGMSQMFATDGTIIPVTMIEIEPNVITQIKTTETDGYNAIQIGVEDKKQKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLF-EFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
            ++P  G      +   K+++ EF V +D+     +G   +   F+ G++VDV G + GK
Sbjct: 61  TTQPEMGHVKKAGLETGKRVYKEFTVGEDEVSNYTLGQELTVDIFSDGEIVDVQGTSKGK 120

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF GA+KRHN      +HG S  HR  GS G      +VFK K + G MG   VT +NLE
Sbjct: 121 GFQGAIKRHNQSRGPMSHG-SRYHRRPGSMGAVAP--QVFKGKNLPGHMGSKTVTTQNLE 177

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +V VD KR ++++KG VPGAKK S++ ++ + K
Sbjct: 178 IVKVDTKRNVLIIKGNVPGAKK-SFVTIKAAVK 209


>gi|294507051|ref|YP_003571109.1| 50S ribosomal protein L3 [Salinibacter ruber M8]
 gi|294343379|emb|CBH24157.1| 50S ribosomal protein L3 [Salinibacter ruber M8]
          Length = 208

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/201 (41%), Positives = 112/201 (55%), Gaps = 4/201 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M SG++ +K+GMT V++ EG  +  TV+      V   ++  ++GY AVQ+G    K KN
Sbjct: 1   MSSGLIGKKVGMTSVFDDEGNNVACTVVEAGPNVVTQVKSEGRDGYSAVQLGFDNVKEKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V++ M G F      PK+ L EFR   DD DL  V  V     F   + +DV G++ GKG
Sbjct: 61  VTQAMLGHFEKAGCPPKRMLSEFRDFGDDVDLGDV--VRVEDLFQEDERIDVVGVSKGKG 118

Query: 120 FSGAMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           F G +KRH F G+   THG S   R  GS G   DP RVFK  +MAG+ GG R  ++NL 
Sbjct: 119 FQGVVKRHGFSGVGMMTHGQSDRQRHPGSIGASADPSRVFKGVRMAGQTGGERTKIQNLR 178

Query: 179 VVSVDDKRGLILVKGCVPGAK 199
           VV +   +  IL+ G VPG K
Sbjct: 179 VVRILADQNAILIHGSVPGPK 199


>gi|221194518|ref|ZP_03567575.1| 50S ribosomal protein L3 [Atopobium rimae ATCC 49626]
 gi|221185422|gb|EEE17812.1| 50S ribosomal protein L3 [Atopobium rimae ATCC 49626]
          Length = 206

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/207 (42%), Positives = 119/207 (57%), Gaps = 3/207 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M + ++ RKLGMT V++     +PVTV+    C V   +T + +GY AVQ+G G+   K+
Sbjct: 1   MVNTILGRKLGMTQVWDENDNVVPVTVILAGPCTVSQVKTAETDGYDAVQIGFGDISEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM G F +  V P + L E RV   ++    G   + + F+    VDV G + GKGF
Sbjct: 61  VNKPMAGHFKAQGVEPMRYLREVRVPAGEE-HKCGDTVTVADFSEVTAVDVIGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF     THG S + R  GS G    P RV K   M G MG  RVTVKNL++V
Sbjct: 120 QGTIKRWNFSRGPMTHG-SRNQRRPGSIGQCAYPARVRKGLHMYGHMGAERVTVKNLKLV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207
            VD ++ L+L+KG VPG  KN+ + VR
Sbjct: 179 RVDAEQNLMLIKGAVPGG-KNALVQVR 204


>gi|302669961|ref|YP_003829921.1| ribosomal protein L3 RplC [Butyrivibrio proteoclasticus B316]
 gi|302394434|gb|ADL33339.1| ribosomal protein L3 RplC [Butyrivibrio proteoclasticus B316]
          Length = 227

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/227 (37%), Positives = 123/227 (54%), Gaps = 19/227 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++  +G  +PVTVL    C V   +T++ +GY AVQVG  + K K 
Sbjct: 1   MKKAILATKVGMTQIFKEDGSLVPVTVLQAGPCVVTQIKTVENDGYSAVQVGFVDKKEKV 60

Query: 61  V----------------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
           V                +K  +G F    VS K+ + EF+++   D   +G+      F 
Sbjct: 61  VNKDKNGNKTIYHRHGATKAEQGHFKKAGVSCKRYVREFKLENAADY-ALGAEIKADVFA 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  +D T ++ GKGF GA+K++        HG S  HR  GS G   DP RVFK K M 
Sbjct: 120 EGDKIDATAISKGKGFQGAIKKNGQHRGPMAHG-SKFHRHQGSNGSSSDPSRVFKGKGMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           G MG  +VTV+NLEVV VD  + LILVKG +PG KK   + ++++ K
Sbjct: 179 GHMGSVKVTVQNLEVVRVDADKNLILVKGAIPGPKK-GLVTIKETVK 224


>gi|286142658|gb|ADC41359.1| ribosomal protein L3 [Streptomyces humidus]
          Length = 167

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/167 (45%), Positives = 98/167 (58%), Gaps = 1/167 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPNVVTQVRTNDSDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVEIRTA-DAAEYTLGQEITAEVFEAGVKVDVTGKSKGKGFAGVMKRHNFKGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTV 166


>gi|293977931|ref|YP_003543361.1| 50S ribosomal protein L3P [Candidatus Sulcia muelleri DMIN]
 gi|292667862|gb|ADE35497.1| LSU ribosomal protein L3P [Candidatus Sulcia muelleri DMIN]
          Length = 206

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/206 (38%), Positives = 130/206 (63%), Gaps = 5/206 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ + +GMT +Y+  G  +P +++    C V+  +T +K+GY + Q+G  E K KN +
Sbjct: 2   SGIIGKNIGMTSMYDESGFNVPCSIIEAGPCIVLQIKTKEKDGYDSCQLGFDEKKYKNTN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+  FF     +PKKK+FEF ++ +   +  G++   ++F   +LV++TG + GKGF G
Sbjct: 62  KPLLFFFKKFKSTPKKKIFEFPIKGN---IKSGNIIKLNFFHENELVNITGFSKGKGFQG 118

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH F G+   +HG     R+ GS G   DP RVFK  +MAGRMG  +VT+KN +++ 
Sbjct: 119 VVKRHGFSGVGERSHGQHNRSRAPGSIGAGSDPSRVFKGTRMAGRMGNKKVTLKNRKILK 178

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           +D     +++KG VPGA KNS+++++
Sbjct: 179 IDLLNNFLIIKGSVPGA-KNSYLIIK 203


>gi|83816242|ref|YP_445167.1| 50S ribosomal protein L3 [Salinibacter ruber DSM 13855]
 gi|109893553|sp|Q2S3R4|RL3_SALRD RecName: Full=50S ribosomal protein L3
 gi|83757636|gb|ABC45749.1| ribosomal protein L3 [Salinibacter ruber DSM 13855]
          Length = 208

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/201 (41%), Positives = 112/201 (55%), Gaps = 4/201 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M SG++ +K+GMT V++ EG  +  TV+      V   ++  ++GY AVQ+G    K KN
Sbjct: 1   MSSGLIGKKVGMTSVFDDEGNNVACTVVEAGPNVVTQVKSEGRDGYSAVQLGFDNVKEKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V++ M G F      PK+ L EFR   DD DL  V  V     F   + +DV G++ GKG
Sbjct: 61  VTQAMLGHFEKAGCPPKRMLSEFRDFGDDVDLGDV--VRVQDLFQEDERIDVVGVSKGKG 118

Query: 120 FSGAMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           F G +KRH F G+   THG S   R  GS G   DP RVFK  +MAG+ GG R  ++NL 
Sbjct: 119 FQGVVKRHGFSGVGMMTHGQSDRQRHPGSIGASADPSRVFKGVRMAGQTGGERTKIQNLR 178

Query: 179 VVSVDDKRGLILVKGCVPGAK 199
           VV +   +  IL+ G VPG K
Sbjct: 179 VVRILADQNAILIHGSVPGPK 199


>gi|257067060|ref|YP_003153316.1| 50S ribosomal protein L3 [Anaerococcus prevotii DSM 20548]
 gi|256798940|gb|ACV29595.1| ribosomal protein L3 [Anaerococcus prevotii DSM 20548]
          Length = 209

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/190 (42%), Positives = 111/190 (58%), Gaps = 2/190 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+S +   K+GMT V + +G   PVTVL  D   VV  +T++ +GY A+QVG  + K KN
Sbjct: 1   MKS-IFTTKVGMTQVIDEDGVITPVTVLKADENVVVQVKTVETDGYNAIQVGYMDKKEKN 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP+R  F   N S K+ L E    ++   L +G   +   F  G +VDV   + GKG 
Sbjct: 60  VTKPVREHFKKANASTKRFLREINFGEETPELNLGDTITVEQFEAGDIVDVVATSKGKGT 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR N+G   A+HG S SHR  G+     DP RVFK +K +G+MG  RVTV+N+EVV
Sbjct: 120 QGAIKRWNYGRGPASHG-SKSHRVAGARAAGSDPARVFKGRKGSGKMGNERVTVQNIEVV 178

Query: 181 SVDDKRGLIL 190
            V  +   IL
Sbjct: 179 KVSVEDNYIL 188


>gi|325479159|gb|EGC82256.1| 50S ribosomal protein L3 [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 209

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/190 (41%), Positives = 112/190 (58%), Gaps = 2/190 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+S +   K+GMT V + +G   PVTVL  D   VV  +T++ +GY A+QVG  + K KN
Sbjct: 1   MKS-IFTTKVGMTQVIDEDGVITPVTVLKADENVVVQVKTVETDGYNAIQVGYMDKKEKN 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V KP+R  F   N + K+ L E    ++   L +G V +   F  G +VD+   + GKG 
Sbjct: 60  VKKPVREHFKKANAATKRYLKEVNFGEETPELNLGDVITVEQFEAGDIVDIVATSKGKGT 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR N+G   A+HG S SHR  G+     DP RVFK +K +G+MG  RVT++N+EVV
Sbjct: 120 QGAIKRWNYGRGPASHG-SKSHRVAGARAAGSDPARVFKGRKGSGKMGNERVTIQNIEVV 178

Query: 181 SVDDKRGLIL 190
            V+ +   IL
Sbjct: 179 KVNVEDNYIL 188


>gi|332170559|gb|AEE19814.1| 50S ribosomal protein L3 [Krokinobacter diaphorus 4H-3-7-5]
          Length = 203

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/206 (38%), Positives = 125/206 (60%), Gaps = 6/206 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C +   RT + +GY A+Q+G  +AK  N +
Sbjct: 2   SGLIGKKVGMTSIFDENGKNIPCTVIEAGPCVITQVRTKEADGYEALQLGFDDAKKANKA 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
                         K+K+ EF  Q  +    +G   +  +F  G+ VDV+G + GKGF G
Sbjct: 62  AAGH--AKKAGTVAKRKVVEF--QGFEGEFKLGDAITVDHFAEGEFVDVSGTSKGKGFQG 117

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH F G+ +ATHG     R+ GS G    P RVFK  +MAGRMGG+++ V+NL+V+ 
Sbjct: 118 VVKRHGFRGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGDKIKVQNLKVLK 177

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L++VKGCVPG  KN++++++
Sbjct: 178 VVAEKNLLVVKGCVPG-HKNAYVIIQ 202


>gi|227501134|ref|ZP_03931183.1| ribosomal protein L3 [Anaerococcus tetradius ATCC 35098]
 gi|227216719|gb|EEI82120.1| ribosomal protein L3 [Anaerococcus tetradius ATCC 35098]
          Length = 209

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/190 (41%), Positives = 111/190 (58%), Gaps = 2/190 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+S +   K+GMT V + +G   PVTVL  D   VV  +T++ +GY A+QVG  + K KN
Sbjct: 1   MKS-IFTTKVGMTQVIDEDGVITPVTVLKADENVVVQVKTVETDGYNAIQVGYMDKKEKN 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP+R  F   N S K+ L E     +   L +G + +   F  G +VDV   + GKG 
Sbjct: 60  VTKPVREHFKKANASTKRYLREVNFGDETPELNLGDIITVEQFEAGDIVDVVATSKGKGT 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR N+G   A+HG S SHR  G+     DP RVFK +K +G+MG  RVT++N+E+V
Sbjct: 120 QGAIKRWNYGRGPASHG-SKSHRVAGARAAGSDPARVFKGRKGSGKMGNERVTIQNIEIV 178

Query: 181 SVDDKRGLIL 190
            V  +   IL
Sbjct: 179 KVSVEDNYIL 188


>gi|304405616|ref|ZP_07387275.1| 50S ribosomal protein L3 [Paenibacillus curdlanolyticus YK9]
 gi|304345655|gb|EFM11490.1| 50S ribosomal protein L3 [Paenibacillus curdlanolyticus YK9]
          Length = 207

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 120/208 (57%), Gaps = 4/208 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V+  EG  +PVTV+      V+  +  + +GY AVQ+G  + K KN +K
Sbjct: 3   GILGKKIGMTQVFTAEGNVVPVTVIEAGPNVVLQKKDQENDGYEAVQLGFVDKKEKNSTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G     N +PK+ + E R     +   VG V     FT G+ VDVTG++ GKGF G 
Sbjct: 63  PAQGHAKKANTAPKRYIREIRGINLGE-YEVGQVIKADVFTAGEFVDVTGVSKGKGFQGV 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR        +HG S  HR  GS G  Q   RV K K++ G MG   +T++NLEVV VD
Sbjct: 122 IKRWGQSTGPMSHG-SRYHRGPGSMGSIQ-ANRVPKGKRLPGHMGSETITIQNLEVVRVD 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +R +ILVKG +PG  KN+ + V+ + K
Sbjct: 180 AERNVILVKGSIPGP-KNALVKVKLTVK 206


>gi|115444097|ref|NP_001045828.1| Os02g0137200 [Oryza sativa Japonica Group]
 gi|113535359|dbj|BAF07742.1| Os02g0137200 [Oryza sativa Japonica Group]
          Length = 274

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/201 (39%), Positives = 114/201 (56%), Gaps = 4/201 (1%)

Query: 4   GVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVH--RTLDKNGYMAVQVGAGEAKVKN 60
           GV+A K+GM   ++   G+ +PVTV+       VV   +T   +GY AVQVG    + + 
Sbjct: 58  GVMATKVGMMTYFDPATGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVREEK 117

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G        P + L EFR+Q  D   P   +     F  G LVD++G +IGKGF
Sbjct: 118 LTRPELGHLGKAGAPPLRHLQEFRLQSVDGYDPGQPLDFADMFKEGDLVDISGKSIGKGF 177

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRHNF     THG S SHR+ GS G    PGRV+K KKM GRMGG +  ++ L++V
Sbjct: 178 QGGIKRHNFKRGLMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIV 236

Query: 181 SVDDKRGLILVKGCVPGAKKN 201
            +D+   ++++KG VPG   N
Sbjct: 237 KIDNDLKVVMIKGAVPGKPGN 257


>gi|162446957|ref|YP_001620089.1| 50S ribosomal protein L3 [Acholeplasma laidlawii PG-8A]
 gi|189042828|sp|A9NED3|RL3_ACHLI RecName: Full=50S ribosomal protein L3
 gi|161985064|gb|ABX80713.1| large subunit ribosomal protein L3 [Acholeplasma laidlawii PG-8A]
          Length = 212

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/214 (39%), Positives = 125/214 (58%), Gaps = 8/214 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT +++  G  IPVTV+ ++   V+  +T++ +GY A QVG    + K 
Sbjct: 1   MAKGILGRKIGMTQIFDENGVLIPVTVIDVEGNVVLQQKTVEVDGYQATQVGFESKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQK-DDDL--LPVGSVFSPSYFTVGQLVDVTGMTIG 117
            +KP  G     N +PK+ + E R    +++L  L VG+      FT G+ VDVTG + G
Sbjct: 61  SNKPELGHVKKANTAPKRFVKEIRFDALNNELLALEVGTEIKADLFTAGEDVDVTGTSKG 120

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF G +KRHN      THG S  HR  GS G  +      K K + G+MG  +VTV+NL
Sbjct: 121 KGFQGNIKRHNQSRGPMTHG-SRYHRGVGSLGAIKGN---MKGKNLPGQMGNEQVTVQNL 176

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           ++V+VD +  L+LV G VPG +K  +++VR + K
Sbjct: 177 KIVAVDTENDLLLVSGSVPGPRK-GYVVVRSAIK 209


>gi|71029452|ref|XP_764369.1| 60S ribosomal protein L3 [Theileria parva strain Muguga]
 gi|68351323|gb|EAN32086.1| 60S ribosomal protein L3, putative [Theileria parva]
          Length = 347

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/198 (41%), Positives = 114/198 (57%), Gaps = 5/198 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           RSGV+A K+G   +++  G R  VTV H+D C V+  RT++KNGY A+Q+G G   +K  
Sbjct: 88  RSGVLAYKIGCMSLWDDWGVRHAVTVCHVDRCVVLEKRTIEKNGYEALQLGLGYKNIKQQ 147

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SKP  G F  +    K  + EF+    D LLP G  FS  +FT GQ V V+G +  KGF 
Sbjct: 148 SKPNIGRFIKLGTGSKNHIAEFKCS-SDCLLPEGHYFSVRHFTPGQWVFVSGWSKAKGFK 206

Query: 122 GAMKRHNFGGLRATHGVSI-SHRSHGSTGCRQDPGRVFKNKKMAGRMGGN-RVTVKNLEV 179
           GAM+R +FGG   +HG    +H + GS    +    V++N KM G +G + RVT  N  V
Sbjct: 207 GAMRRWSFGGQNQSHGTECKAHSAPGSISQGKSVHIVWRNTKMGGHVGPDPRVT--NCRV 264

Query: 180 VSVDDKRGLILVKGCVPG 197
             ++  R LI +KG +PG
Sbjct: 265 FRIETHRNLIFLKGAIPG 282


>gi|209528437|ref|ZP_03276868.1| ribosomal protein L3 [Arthrospira maxima CS-328]
 gi|209491125|gb|EDZ91549.1| ribosomal protein L3 [Arthrospira maxima CS-328]
          Length = 229

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/214 (37%), Positives = 119/214 (55%), Gaps = 19/214 (8%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT V++ E G+ IPVTV+    C +   +T   +GY A+Q+G GE   K
Sbjct: 1   MSVGILGTKLGMTQVFDAETGKAIPVTVVQAGPCTITQVKTEATDGYTAIQLGYGEVPNK 60

Query: 60  N----------------VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
                            +S   +G  +  N    + L E+R++  D+   +G       F
Sbjct: 61  TRKLNTRKSPDKEVNKYLSHAEQGHLTKSNSPLVRHLKEYRLESTDNF-ELGQEIKVDTF 119

Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
            +GQ+VDVTG+++G+GF+G  KR+NF      HG S +HR  GS G    PGRV+  KKM
Sbjct: 120 ELGQMVDVTGISMGRGFAGNQKRNNFRRGPMAHG-SKNHRLPGSIGPGTTPGRVYPGKKM 178

Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197
           AGR GG ++T + L +V +D +R L+L+KG +PG
Sbjct: 179 AGRYGGKQITTRKLTIVRIDLERNLLLIKGSIPG 212


>gi|242063968|ref|XP_002453273.1| hypothetical protein SORBIDRAFT_04g002980 [Sorghum bicolor]
 gi|241933104|gb|EES06249.1| hypothetical protein SORBIDRAFT_04g002980 [Sorghum bicolor]
          Length = 270

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/201 (40%), Positives = 112/201 (55%), Gaps = 4/201 (1%)

Query: 4   GVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVH--RTLDKNGYMAVQVGAGEAKVKN 60
           GV+A K+GM   ++ E G+ +PVTV+       VV   +T   +GY AVQVG    +   
Sbjct: 54  GVMATKVGMMTYFDPETGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVREDK 113

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G        P K L EFR+   D   P   +     F  G ++DV+G TIGKGF
Sbjct: 114 LTRPELGHLGKAGAPPLKHLQEFRLTAVDAFEPGQPLDFADLFKEGDIIDVSGNTIGKGF 173

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRHNF     THG S SHR  GS G    PGRV+K KKM GRMGG +  ++ L++V
Sbjct: 174 QGGIKRHNFKRGLMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGKKTKIRKLKIV 232

Query: 181 SVDDKRGLILVKGCVPGAKKN 201
            +D+   ++++KG VPG   N
Sbjct: 233 KIDNDLRVLMIKGAVPGKPGN 253


>gi|286142804|gb|ADC41432.1| ribosomal protein L3 [Streptomyces galbus]
          Length = 167

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 76/167 (45%), Positives = 98/167 (58%), Gaps = 1/167 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVEIRTA-DASEYTLGQEITAEVFEAGIKVDVTGKSKGKGFAGVMKRHNFKGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTV 166


>gi|116624202|ref|YP_826358.1| 50S ribosomal protein L3P [Candidatus Solibacter usitatus
           Ellin6076]
 gi|122253082|sp|Q01W92|RL3_SOLUE RecName: Full=50S ribosomal protein L3
 gi|116227364|gb|ABJ86073.1| LSU ribosomal protein L3P [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 210

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/210 (38%), Positives = 118/210 (56%), Gaps = 3/210 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVK 59
           M  G++ +K+GMT ++  +G+ +PVT+L    C VV  +T   +GY AVQ+G  E  K +
Sbjct: 1   MSPGILGKKIGMTQIFRPDGQVVPVTLLKAGPCMVVQRKTPSTDGYDAVQLGLVEFIKPQ 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++KP  G      V   K + EF +    D L  G       F     VDV G++ GKG
Sbjct: 61  RINKPTAGRLKKAGVEGAKFMREFTLGPGSDDLKTGDQVLVDQFKPKDKVDVVGISKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRH+F G   +HG S+ HR+ GS G    P RV    +M G +G  +VTV+NLEV
Sbjct: 121 FAGVVKRHHFRGGEGSHG-SMFHRAPGSIGASSFPSRVVPGMRMGGHLGNAQVTVRNLEV 179

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           + VD +  +++VKG VPG     ++LVR S
Sbjct: 180 IDVDTEDNVLVVKGAVPGP-NGGYVLVRRS 208


>gi|282878759|ref|ZP_06287527.1| 50S ribosomal protein L3 [Prevotella buccalis ATCC 35310]
 gi|281299150|gb|EFA91551.1| 50S ribosomal protein L3 [Prevotella buccalis ATCC 35310]
          Length = 204

 Score =  135 bits (340), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 80/205 (39%), Positives = 121/205 (59%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V++ +G+ IP TV+    C V   +T + +GY A+Q+G GEAK K  +K
Sbjct: 3   GLIGRKIGMTSVFSADGKNIPCTVIEAGPCVVTQVKTEETDGYKALQLGFGEAKEKRTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F     +PKK L EF+   + +L   G   +   F   + VDV G + GKGF G 
Sbjct: 63  PLLGTFKKAGTTPKKHLVEFKFDGEYNL---GDTITVELFNDTEFVDVIGTSKGKGFQGV 119

Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG+ + THG     R  G+ G    P +VFK  +M G+MGG+RVT +NL V+ V
Sbjct: 120 VKRHGFGGVGQRTHGQDDRARKPGAIGACSYPAKVFKGMRMGGQMGGDRVTTQNLRVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             ++ L++VKG   G   ++ ++ +
Sbjct: 180 IPEKNLLIVKGSFAGCNGSTVLIEK 204


>gi|7674308|sp|Q9ZI50|RL3_AQUPY RecName: Full=50S ribosomal protein L3
 gi|4165865|gb|AAD08785.1| ribosomal protein L3 [Aquifex pyrophilus]
          Length = 244

 Score =  135 bits (340), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/230 (40%), Positives = 131/230 (56%), Gaps = 17/230 (7%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVK 59
           M  G++  K+GMT V   +G  IPVTV+      VV  ++++ K+GY A+QVGA EAK K
Sbjct: 1   MPLGLIGEKVGMTRVLLKDGTAIPVTVIKFPVNYVVQVKSVNTKDGYNALQVGAYEAKEK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-----LPVGSVFSPSYFTVGQLVDVTGM 114
           +++KP+ G F    V   ++L+EFRV   ++      L V  VF P     G LVDV G+
Sbjct: 61  HLTKPLIGHFKKHGVPLLRRLWEFRVDNPEEFKSGQELRVQDVFKP-----GDLVDVWGI 115

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           + G+GF+G MKR +F G   +HG    HR+ G+ G R DPGRV+K KKM G  G   V V
Sbjct: 116 SKGRGFAGVMKRWDFAGFPRSHG-HRYHRAVGAIGQRTDPGRVWKGKKMPGHYGAKPVRV 174

Query: 175 KNLEVVSVDDKRGLILVKG-CVPGAKKNSWILV----RDSFKSAVNCKGK 219
           + L VV+   +   ILVKG  +PG  K   +L+    R +++ +   K K
Sbjct: 175 QGLFVVASLPEENAILVKGSALPGHNKGIVVLLPAVERIAYRKSQKLKQK 224


>gi|286142692|gb|ADC41376.1| ribosomal protein L3 [Streptomyces acrimycini]
          Length = 167

 Score =  135 bits (340), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 76/167 (45%), Positives = 98/167 (58%), Gaps = 1/167 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVEIRTA-DASEYTLGQEVTAEVFEAGVKVDVTGKSKGKGFAGVMKRHNFKGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTV 166


>gi|298243968|ref|ZP_06967775.1| 50S ribosomal protein L3 [Ktedonobacter racemifer DSM 44963]
 gi|297557022|gb|EFH90886.1| 50S ribosomal protein L3 [Ktedonobacter racemifer DSM 44963]
          Length = 262

 Score =  135 bits (339), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 89/249 (35%), Positives = 122/249 (48%), Gaps = 51/249 (20%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ RK+GMT V+   G  IPVTV+ +  C V   +T+ ++GY AVQ+G  E  +K+
Sbjct: 1   MLDALLGRKVGMTQVFGQNGTVIPVTVIEVGPCIVTQVKTVARDGYEAVQIGFEETTLKH 60

Query: 61  VSKPMRGFF-------------------------------------------------SS 71
            ++P  G                                                     
Sbjct: 61  STRPELGHLGHSLPLLKGQRKALQTHDQQAKSEENKEEEKQSKQVRKLLKIRENRQRRPG 120

Query: 72  VNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129
             + P K L E  +Q+  DL  + +G  F+ S FT G++VD+ G+T GKGF G +KRH F
Sbjct: 121 PELGPFKVLREVGLQEGVDLGSVELGHSFNASLFTDGEIVDIVGITKGKGFQGGVKRHGF 180

Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLI 189
            G   THG S   R+ GS G    PGRV K  +MAGRMG  RVTVK L++V  D +R L+
Sbjct: 181 RGGPRTHGQSDRLRAPGSIGSGTTPGRVLKGTRMAGRMGNARVTVKKLQIVQSDPERNLL 240

Query: 190 LVKGCVPGA 198
           +VKG VPGA
Sbjct: 241 VVKGSVPGA 249


>gi|258646053|ref|ZP_05733522.1| 50S ribosomal protein L3 [Dialister invisus DSM 15470]
 gi|260403423|gb|EEW96970.1| 50S ribosomal protein L3 [Dialister invisus DSM 15470]
          Length = 213

 Score =  135 bits (339), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 85/215 (39%), Positives = 128/215 (59%), Gaps = 5/215 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++  KLGM+ V+   G  +PVTV+ +    VV  +T++ +GY AVQ+G G  K K+
Sbjct: 1   MSKAILGTKLGMSQVFAENGDLVPVTVVEVLPNVVVGVKTVETDGYNAVQIGYGAVKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P++G F    + P K L E+R+ +  +   VG   +   F  G+ VDV G++ GKGF
Sbjct: 61  LTRPVKGQFEKAGIDPVKYLREYRLAEKPEYT-VGQTLAADIFAAGEFVDVIGISRGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK--MAGRMGGNRVTVKNLE 178
           +G +KR N      +HG S +HR   S G R   G     K   M G++GG+RVTV+NLE
Sbjct: 120 AGTIKRWNHQRGPESHG-SKNHRQTASLGARMSGGGGKVFKGKKMPGQLGGDRVTVQNLE 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           VV VD  R ++LVKG +PGA K S ++V+ + KS+
Sbjct: 179 VVRVDTDRSILLVKGGIPGA-KGSLVMVKTAVKSS 212


>gi|313678365|ref|YP_004056105.1| 50S ribosomal protein L3 [Mycoplasma bovis PG45]
 gi|312950290|gb|ADR24885.1| ribosomal protein L3 [Mycoplasma bovis PG45]
          Length = 276

 Score =  135 bits (339), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 80/210 (38%), Positives = 121/210 (57%), Gaps = 6/210 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT +Y   G+RIPVTV+ +    V    T+++NGY+A Q+   E K K V++
Sbjct: 3   GILGRKVGMTQIYTELGQRIPVTVVEVKPNVVTKVLTVEQNGYVATQLATVEKKAKRVNR 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F     +PK+ + E R  +  +L   G   + S F  G+LVD+TG + GKGF+G 
Sbjct: 63  PLAGQFIQAKTTPKQYIKEIRGMQGYEL---GQEVNASIFEAGELVDITGTSKGKGFAGT 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181
           +KR N      +HG     +    TG   D    RV K   M G +G  + TV+NLE+V 
Sbjct: 120 IKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVVKGMTMPGHLGSEKTTVQNLEIVK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           VD    ++LVKG +PGAKK S+++++ + K
Sbjct: 180 VDVANNILLVKGSIPGAKK-SFVIIKQAVK 208


>gi|307128705|ref|YP_003880735.1| 50S ribosomal protein L3 [Candidatus Sulcia muelleri CARI]
 gi|306483167|gb|ADM90037.1| 50S ribosomal protein L3 [Candidatus Sulcia muelleri CARI]
          Length = 206

 Score =  134 bits (338), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 81/206 (39%), Positives = 131/206 (63%), Gaps = 5/206 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ + +GMT +++  G  IP T++    C V+  +T +K+GY + Q+G  E K+ N +
Sbjct: 4   SGIIGKNIGMTSIFDESGCNIPCTIIEAGPCIVLQIKTKEKDGYDSCQLGFDEKKINNTN 63

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ GFF  +  +PKKK+FEF ++K    +  G +   + F   + V++TG++ GKGF G
Sbjct: 64  KPLLGFFKKIKSTPKKKIFEFYIKKK---IKSGDLIKLNIFNENEYVNITGISKGKGFQG 120

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH F G+   +HG     R+ GS G   DP RVFK  KMAGR+G  +VT+K ++++ 
Sbjct: 121 VVKRHGFSGVGEKSHGQHNRSRAPGSIGAGSDPSRVFKGTKMAGRLGNKKVTIKKIKILK 180

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           +D  + L++VKG VPG  KNS++++R
Sbjct: 181 IDLIKNLLIVKGSVPG-HKNSYLIIR 205


>gi|194708314|gb|ACF88241.1| unknown [Zea mays]
          Length = 262

 Score =  134 bits (338), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 80/201 (39%), Positives = 112/201 (55%), Gaps = 4/201 (1%)

Query: 4   GVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVH--RTLDKNGYMAVQVGAGEAKVKN 60
           GV+A K+GM   ++ E G+ +PVTV+       VV   +T   +GY AVQVG    +   
Sbjct: 46  GVMATKVGMMTYFDPETGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVREDK 105

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G        P + L EFR+   D   P   +     F  G L+DV+G +IGKGF
Sbjct: 106 LTRPELGHLGKAGAPPLRHLQEFRLTAVDAFEPGQPLDFADLFKEGDLIDVSGNSIGKGF 165

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRHNF     THG S SHR  GS G    PGRV+K KKM GRMGG +  ++ L++V
Sbjct: 166 QGGIKRHNFKRGLMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIV 224

Query: 181 SVDDKRGLILVKGCVPGAKKN 201
            +D+   ++++KG VPG   N
Sbjct: 225 KIDNNLRVLMIKGAVPGKPGN 245


>gi|240279928|gb|EER43432.1| 50S ribosomal protein L3 [Ajellomyces capsulatus H143]
          Length = 247

 Score =  134 bits (338), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 69/158 (43%), Positives = 103/158 (65%), Gaps = 1/158 (0%)

Query: 43  KNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSY 102
           KNGY AVQ+G G    + V++PM G F++  V+PK+ + EFRV+ ++ LLP+G + + ++
Sbjct: 60  KNGYYAVQIGCGWKHERAVTRPMLGHFAANGVAPKRHIHEFRVKDENGLLPIGEMINANW 119

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNK 161
           F  GQ VD    + G GF+G MKRH F G   +HGVS++HR    S   +    RV+  K
Sbjct: 120 FQEGQYVDARSNSRGMGFAGVMKRHGFHGQDRSHGVSLTHRSMGSSGPGQGGGSRVYPGK 179

Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAK 199
           KMAG MG  +VT++NL+V+ VD ++G+++V G V G K
Sbjct: 180 KMAGNMGNKQVTLQNLKVLKVDAEKGIVVVNGNVSGPK 217


>gi|42559164|sp|O80360|RK3_TOBAC RecName: Full=50S ribosomal protein L3, chloroplastic; Flags:
           Precursor
 gi|189096128|pdb|3BBO|F Chain F, Homology Model For The Spinach Chloroplast 50s Subunit
           Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
 gi|3298437|dbj|BAA31509.1| chloroplast ribosomal protein L3 [Nicotiana tabacum]
          Length = 259

 Score =  134 bits (338), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 83/199 (41%), Positives = 113/199 (56%), Gaps = 2/199 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62
           GV+A KLGM   +   G  +PVTV+      +V   +T   +GY AVQVG    + + ++
Sbjct: 45  GVMATKLGMMSFFEESGTVVPVTVVGFREGNIVTQIKTEATDGYNAVQVGYRRVRDRKLT 104

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G      + P + L EFR+Q  D       +     F  G LVDV+G TIGKGF G
Sbjct: 105 KPEMGHLEKSGIIPLRHLQEFRLQSIDGFEVTQKLDFGELFKEGDLVDVSGTTIGKGFQG 164

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHNF   + THG S SHR  GS G    PGRV+K KKM GRMGG +  ++ L++V +
Sbjct: 165 GIKRHNFKRGQMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKI 223

Query: 183 DDKRGLILVKGCVPGAKKN 201
           DD+  +I++KG +PG   N
Sbjct: 224 DDQLNIIMIKGALPGKPGN 242


>gi|291567784|dbj|BAI90056.1| 50S ribosomal protein L3 [Arthrospira platensis NIES-39]
          Length = 229

 Score =  134 bits (338), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 81/214 (37%), Positives = 118/214 (55%), Gaps = 19/214 (8%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT V++ E G+ IPVTV+    C +   +T   +GY A+Q+G GE   K
Sbjct: 1   MSVGILGTKLGMTQVFDTETGKAIPVTVVQAGPCTITQVKTEATDGYTAIQLGYGEVPNK 60

Query: 60  N----------------VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
                            +S   +G  +  N    + L E+R++  D+   +G       F
Sbjct: 61  TRKLNTRKSPDKEVNKYLSHAEQGHLTKSNSPLVRHLKEYRLESTDNF-ELGQEVKVDAF 119

Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
             GQ+VDVTG+++G+GF+G  KR+NF      HG S +HR  GS G    PGRV+  KKM
Sbjct: 120 EPGQIVDVTGISMGRGFAGNQKRNNFRRGPMAHG-SKNHRLPGSIGPGTTPGRVYPGKKM 178

Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197
           AGR GG ++T + L +V VD +R L+L+KG +PG
Sbjct: 179 AGRYGGKQITTRKLTIVRVDLERNLLLIKGSIPG 212


>gi|284052648|ref|ZP_06382858.1| 50S ribosomal protein L3 [Arthrospira platensis str. Paraca]
          Length = 229

 Score =  134 bits (338), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 81/214 (37%), Positives = 118/214 (55%), Gaps = 19/214 (8%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT V++ E G+ IPVTV+    C +   +T   +GY A+Q+G GE   K
Sbjct: 1   MSVGILGTKLGMTQVFDTETGKAIPVTVVQAGPCTITQVKTEATDGYTAIQLGYGEVPNK 60

Query: 60  N----------------VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
                            +S   +G  +  N    + L E+R++  D+   +G       F
Sbjct: 61  TRKLNTRKSPDKEVNKYLSHAEQGHLTKSNSPLVRHLKEYRLESTDNF-ELGQQVKVDAF 119

Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
             GQ+VDVTG+++G+GF+G  KR+NF      HG S +HR  GS G    PGRV+  KKM
Sbjct: 120 EPGQIVDVTGISMGRGFAGNQKRNNFRRGPMAHG-SKNHRLPGSIGPGTTPGRVYPGKKM 178

Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197
           AGR GG ++T + L +V VD +R L+L+KG +PG
Sbjct: 179 AGRYGGKQITTRKLTIVRVDLERNLLLIKGSIPG 212


>gi|195657099|gb|ACG48017.1| 50S ribosomal protein L3 [Zea mays]
          Length = 267

 Score =  134 bits (338), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 80/201 (39%), Positives = 112/201 (55%), Gaps = 4/201 (1%)

Query: 4   GVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVH--RTLDKNGYMAVQVGAGEAKVKN 60
           GV+A K+GM   ++ E G+ +PVTV+       VV   +T   +GY AVQVG    +   
Sbjct: 51  GVMATKVGMMTYFDPETGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVREDK 110

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G        P + L EFR+   D   P   +     F  G L+DV+G +IGKGF
Sbjct: 111 LTRPELGHLGKAGAPPLRHLQEFRLTAVDAFEPGQPLDFADLFKEGDLIDVSGNSIGKGF 170

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRHNF     THG S SHR  GS G    PGRV+K KKM GRMGG +  ++ L++V
Sbjct: 171 QGGIKRHNFKRGLMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIV 229

Query: 181 SVDDKRGLILVKGCVPGAKKN 201
            +D+   ++++KG VPG   N
Sbjct: 230 KIDNNLRVLMIKGAVPGKPGN 250


>gi|194700790|gb|ACF84479.1| unknown [Zea mays]
          Length = 230

 Score =  134 bits (338), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 80/201 (39%), Positives = 112/201 (55%), Gaps = 4/201 (1%)

Query: 4   GVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVH--RTLDKNGYMAVQVGAGEAKVKN 60
           GV+A K+GM   ++ E G+ +PVTV+       VV   +T   +GY AVQVG    +   
Sbjct: 14  GVMATKVGMMTYFDPETGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVREDK 73

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G        P + L EFR+   D   P   +     F  G L+DV+G +IGKGF
Sbjct: 74  LTRPELGHLGKAGAPPLRHLQEFRLTAVDAFEPGQPLDFADLFKEGDLIDVSGNSIGKGF 133

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRHNF     THG S SHR  GS G    PGRV+K KKM GRMGG +  ++ L++V
Sbjct: 134 QGGIKRHNFKRGLMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIV 192

Query: 181 SVDDKRGLILVKGCVPGAKKN 201
            +D+   ++++KG VPG   N
Sbjct: 193 KIDNNLRVLMIKGAVPGKPGN 213


>gi|286142594|gb|ADC41327.1| ribosomal protein L3 [Streptomyces platensis]
          Length = 167

 Score =  134 bits (337), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 74/167 (44%), Positives = 99/167 (59%), Gaps = 1/167 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+    C V   RT D++GY +VQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPCVVTQVRTNDQDGYDSVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRH F G 
Sbjct: 61  DVTPRRHLVEVRTA-DAGEYTLGQELTAETFESGVKVDVTGKSKGKGFAGVMKRHGFHGG 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           +A+HG    HR  GS G    PGRVFK  +MAGRMG  RVT +NL V
Sbjct: 120 KASHGAHRVHRKPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTV 166


>gi|327540578|gb|EGF27153.1| 50S ribosomal protein L3 [Rhodopirellula baltica WH47]
          Length = 217

 Score =  134 bits (337), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 112/205 (54%), Gaps = 22/205 (10%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT ++  +G  +PVTV+    C V+  R+ D++GY AVQ+G  +   +   +  RG  ++
Sbjct: 1   MTQIFLEDGTAVPVTVVQAGPCHVLQVRSKDRDGYEAVQMGFEDKPRRLAKRSERGQVAT 60

Query: 72  V-------------------NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
           +                   +  P++ + EFR   + +   VG   +   F   + VD+T
Sbjct: 61  IESKRSKKRSAAGIEAPAKADCEPQRFVREFRGSSEAN---VGDTLTVEQFNDVKKVDIT 117

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G + G+GF+G MKRHNF G RATHGV   HR  G TG    P R FK K+MAG+ G  +V
Sbjct: 118 GTSKGRGFAGVMKRHNFAGQRATHGVKKCHRHAGGTGMSASPSRTFKGKRMAGQYGNAKV 177

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPG 197
           T +NLEVV VD +  L++++G VPG
Sbjct: 178 TTRNLEVVRVDAENNLLMIRGAVPG 202


>gi|286142618|gb|ADC41339.1| ribosomal protein L3 [Streptomyces tuirus]
          Length = 167

 Score =  134 bits (337), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 75/167 (44%), Positives = 98/167 (58%), Gaps = 1/167 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+      V   RT D +GY ++Q+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESIQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVEIRTA-DASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTV 166


>gi|286142608|gb|ADC41334.1| ribosomal protein L3 [Streptomyces platensis]
          Length = 167

 Score =  134 bits (337), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 74/167 (44%), Positives = 99/167 (59%), Gaps = 1/167 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+    C V   RT D++GY +VQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPCVVTQVRTNDQDGYDSVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRH F G 
Sbjct: 61  DVTPRRHLVEVRTT-DAGEYTLGQELTAETFESGVKVDVTGKSKGKGFAGVMKRHGFHGG 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           +A+HG    HR  GS G    PGRVFK  +MAGRMG  RVT +NL V
Sbjct: 120 KASHGAHRVHRKPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTV 166


>gi|286142656|gb|ADC41358.1| ribosomal protein L3 [Streptomyces glaucescens]
          Length = 167

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/167 (44%), Positives = 98/167 (58%), Gaps = 1/167 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+      V   RT D +GY +VQ+  G+   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGDIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVEIRTS-DASEYTLGQEITAEVFEAGVKVDVTGKSKGKGFAGVMKRHNFRGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTV 166


>gi|227485525|ref|ZP_03915841.1| ribosomal protein L3 [Anaerococcus lactolyticus ATCC 51172]
 gi|227236524|gb|EEI86539.1| ribosomal protein L3 [Anaerococcus lactolyticus ATCC 51172]
          Length = 211

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/182 (42%), Positives = 108/182 (59%), Gaps = 1/182 (0%)

Query: 9   KLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGF 68
           K+GMT V + +G   PVTVL  D   VV  +T D +GY A+QVG  + K KNV KP+RG 
Sbjct: 8   KVGMTQVIDEDGVITPVTVLKADENVVVQVKTTDVDGYNAIQVGTVDKKEKNVKKPIRGH 67

Query: 69  FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
           +     S K+ L E  + ++   L  G   +   F  G+LVDV  ++ GKG  GA+KR N
Sbjct: 68  YDKAGASYKRYLKEINLGEEVTELKAGDKITVDVFEEGELVDVVAISKGKGTQGAIKRWN 127

Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188
           +G   A+HG S SHR  G+     DP RVFK +K +G+MG  RVT++N++VV V+ +   
Sbjct: 128 YGRGPASHG-SKSHRVAGARAAGSDPSRVFKGRKGSGKMGHERVTIQNVKVVKVNAEDSY 186

Query: 189 IL 190
           IL
Sbjct: 187 IL 188


>gi|254449111|ref|ZP_05062563.1| ribosomal protein L3 [gamma proteobacterium HTCC5015]
 gi|198261303|gb|EDY85596.1| ribosomal protein L3 [gamma proteobacterium HTCC5015]
          Length = 176

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/176 (44%), Positives = 103/176 (58%), Gaps = 2/176 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVK 59
           M  G+V RK GMT V+  +G  +PVTV+     +V   ++ +  +GY ++QV  GE +  
Sbjct: 1   MAIGLVGRKAGMTRVFTEDGVSVPVTVIEAAPNRVTQVKSQEAADGYSSLQVTKGERRAS 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV-FSPSYFTVGQLVDVTGMTIGK 118
            V+KPM G ++   V     L+EFR++ ++              F  GQ VDV G +IGK
Sbjct: 61  RVTKPMAGHYAKAGVEAGDGLWEFRLEGEEGEGIEVGGELKVDLFEAGQKVDVIGTSIGK 120

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           GF G +KRHNF    ATHG SISHR+ GSTG  Q PGRVFK K+MAG MG  RVT 
Sbjct: 121 GFQGGIKRHNFRSQDATHGNSISHRAPGSTGQCQTPGRVFKGKRMAGHMGSKRVTA 176


>gi|330903578|gb|EGH34150.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 139

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 71/137 (51%), Positives = 88/137 (64%), Gaps = 2/137 (1%)

Query: 69  FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
           F+  NV+  + + EFR+++ D     G       F  GQLVDVTG + GKGF G +KR N
Sbjct: 1   FAKANVAAGRTVMEFRLEEGD--YQAGDQIKAEIFAAGQLVDVTGQSKGKGFQGTIKRWN 58

Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188
           F G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV VD +R L
Sbjct: 59  FRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVVRVDAERNL 118

Query: 189 ILVKGCVPGAKKNSWIL 205
           +LVKG VPGA   + +L
Sbjct: 119 LLVKGAVPGATGGNLVL 135


>gi|153004713|ref|YP_001379038.1| 50S ribosomal protein L3 [Anaeromyxobacter sp. Fw109-5]
 gi|166233114|sp|A7HBF8|RL3_ANADF RecName: Full=50S ribosomal protein L3
 gi|152028286|gb|ABS26054.1| ribosomal protein L3 [Anaeromyxobacter sp. Fw109-5]
          Length = 236

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/205 (40%), Positives = 117/205 (57%), Gaps = 9/205 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M +G++A+KLGMT ++  EG  IPVTVL    C VV  +T +K+GY AV +G GE   K+
Sbjct: 1   MATGLLAKKLGMTQIFTAEGDCIPVTVLEAGPCTVVRRKTAEKDGYDAVVIGWGEVDEKH 60

Query: 61  ---VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL---LPVGSVFS-PSYFTVGQLVDVTG 113
              ++KP  G F        + + E RV KD  L   L  G V +    F   Q +DV G
Sbjct: 61  AHRLTKPEVGVFKKAGTPVFRHVKEIRV-KDAKLLGELKAGDVLTVDKVFKQDQRIDVAG 119

Query: 114 MTIGKGFSGAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           +T G+GF+G MKR N  G  R +      HR  G+ G R+ PG+V+K K + G  G + V
Sbjct: 120 VTKGRGFTGVMKRWNMHGAARDSSTTHEHHRHVGAIGQRKTPGKVWKGKHLPGHYGVDNV 179

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPG 197
           T++NL +V V+  + L+LVKG VPG
Sbjct: 180 TIQNLTIVGVEADKNLLLVKGAVPG 204


>gi|330902741|gb|EGH33754.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 143

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/144 (50%), Positives = 93/144 (64%), Gaps = 3/144 (2%)

Query: 69  FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
           F+  NV+  + + EFR+++ D     G       F  GQLVDVTG + GKGF G +KR N
Sbjct: 1   FAKANVAAGRTVMEFRLEEGD--YQAGDQIKAEIFAAGQLVDVTGQSKGKGFQGTIKRWN 58

Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188
           F G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV VD +R L
Sbjct: 59  FRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVVRVDAERNL 118

Query: 189 ILVKGCVPGAKKNSWILVRDSFKS 212
           +LVKG VPGA   + ++VR + K+
Sbjct: 119 LLVKGAVPGATGGN-LVVRPAAKA 141


>gi|294155415|ref|YP_003559799.1| 50S ribosomal protein L3 [Mycoplasma crocodyli MP145]
 gi|291600390|gb|ADE19886.1| 50S ribosomal protein L3 [Mycoplasma crocodyli MP145]
          Length = 269

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/214 (38%), Positives = 117/214 (54%), Gaps = 6/214 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT VY   G+R+ VTV+ +    V    + +KNGY A+Q+   + K    +K
Sbjct: 3   GILGRKVGMTQVYTETGQRVAVTVIEVQPNVVTKVLSQEKNGYTAIQLAVFDKKASRSNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+    +PK+ + E R   D     +G V   + F  G+LVDVTG + GKGF+G 
Sbjct: 63  PETGHFAKAKTTPKRYVKEVR---DMSGYELGQVLQANVFKAGELVDVTGTSKGKGFAGT 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181
           +KRHN      +HG     +    TG   D    +V K   M G++G  R TV+NLEVV 
Sbjct: 120 IKRHNQHIGPKSHGGGGGSQPVRQTGSLGDIAGNKVVKGMTMPGQLGNERTTVQNLEVVK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           VD    L+L+KG +PG KK S+++VR   K   N
Sbjct: 180 VDLVNNLLLIKGSIPGPKK-SFVMVRQGVKGLAN 212


>gi|218678066|ref|ZP_03525963.1| 50S ribosomal protein L3 [Rhizobium etli CIAT 894]
          Length = 137

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 68/117 (58%), Positives = 83/117 (70%), Gaps = 4/117 (3%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT VYN  G  +PVTVL ++  QVV  RT++KNGY AVQ+GAG+AKVKN SK MRG F+ 
Sbjct: 1   MTRVYNDAGEHVPVTVLRMEAVQVVATRTVEKNGYTAVQLGAGQAKVKNTSKAMRGNFAV 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
            NV PK KL EFRV  +D+LL +G+     +F  GQLVDVTG TIGKGF+   +RH 
Sbjct: 61  ANVEPKAKLQEFRVS-EDNLLEIGTELKAGHFAAGQLVDVTGTTIGKGFA---RRHE 113


>gi|224370691|ref|YP_002604855.1| 50S ribosomal protein L3 [Desulfobacterium autotrophicum HRM2]
 gi|259647408|sp|C0Q9X3|RL3_DESAH RecName: Full=50S ribosomal protein L3
 gi|223693408|gb|ACN16691.1| RplC [Desulfobacterium autotrophicum HRM2]
          Length = 207

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 111/199 (55%), Gaps = 2/199 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++  +G  +PVTV+    C V   +    +GY A+Q+G  E  +  
Sbjct: 1   MFKGMLGKKIGMTSIFAADGTLVPVTVVRFGPCVVTQVKAEKTDGYNALQLGFDERALAK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP  G FS    +    + EFRV+  D+   VG       F +G  V+V+G + G+GF
Sbjct: 61  CNKPKVGHFSKSGSTGFNVVREFRVENTDEF-EVGQNIGLDGFAIGDKVNVSGTSKGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH F     THG   +HR  GS GC   P RV K ++M G MG +R TVKNLE++
Sbjct: 120 AGTIKRHGFSRGPETHGCR-NHRKPGSIGCSAWPARVVKGRRMPGHMGVDRKTVKNLEII 178

Query: 181 SVDDKRGLILVKGCVPGAK 199
            +     L+++KG VPG K
Sbjct: 179 DIRPDENLVMIKGPVPGWK 197


>gi|297824271|ref|XP_002880018.1| 50S ribosomal protein L3 [Arabidopsis lyrata subsp. lyrata]
 gi|297325857|gb|EFH56277.1| 50S ribosomal protein L3 [Arabidopsis lyrata subsp. lyrata]
          Length = 271

 Score =  132 bits (333), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 112/199 (56%), Gaps = 2/199 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62
           GV+  KLGM   +  +G  +PVTV+      +V   +TL  +GY AVQ+G    + K ++
Sbjct: 57  GVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYDAVQIGYRRVRDKKLT 116

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G        P + L EFR+   +   P   +     F  G LVDV G TIGKGF G
Sbjct: 117 KPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGDLVDVAGTTIGKGFQG 176

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRH+F   + THG S SHR+ GS G    PGRV+K KKM GRMGG R  ++ L++V V
Sbjct: 177 GIKRHHFKRGQMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTRTKIRKLKIVKV 235

Query: 183 DDKRGLILVKGCVPGAKKN 201
           D +  ++++KG +PG   N
Sbjct: 236 DKELNVVMIKGALPGKPGN 254


>gi|21553426|gb|AAM62519.1| 50S ribosomal protein L3 [Arabidopsis thaliana]
          Length = 271

 Score =  132 bits (333), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 112/199 (56%), Gaps = 2/199 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62
           GV+  KLGM   +  +G  +PVTV+      +V   +TL  +GY AVQ+G    + K ++
Sbjct: 57  GVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYDAVQIGYRRVRDKKLT 116

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G        P + L EFR+   +   P   +     F  G LVDV G TIGKGF G
Sbjct: 117 KPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGDLVDVAGTTIGKGFQG 176

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRH+F   + THG S SHR+ GS G    PGRV+K KKM GRMGG R  ++ L++V V
Sbjct: 177 GIKRHHFKRGQMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTRTKIRKLKIVKV 235

Query: 183 DDKRGLILVKGCVPGAKKN 201
           D +  ++++KG +PG   N
Sbjct: 236 DKELNVVMIKGALPGKPGN 254


>gi|42409125|dbj|BAD10375.1| putative 50S ribosomal protein L3 [Oryza sativa Japonica Group]
 gi|42409256|dbj|BAD10519.1| putative 50S ribosomal protein L3 [Oryza sativa Japonica Group]
          Length = 215

 Score =  132 bits (333), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/199 (39%), Positives = 113/199 (56%), Gaps = 4/199 (2%)

Query: 6   VARKLGMTCVYN-IEGRRIPVTVLHL-DNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62
           +A K+GM   ++   G+ +PVTV+   +   VV   +T   +GY AVQVG    + + ++
Sbjct: 1   MATKVGMMTYFDPATGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVREEKLT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +P  G        P + L EFR+Q  D   P   +     F  G LVD++G +IGKGF G
Sbjct: 61  RPELGHLGKAGAPPLRHLQEFRLQSVDGYDPGQPLDFADMFKEGDLVDISGKSIGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHNF     THG S SHR+ GS G    PGRV+K KKM GRMGG +  ++ L++V +
Sbjct: 121 GIKRHNFKRGLMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKI 179

Query: 183 DDKRGLILVKGCVPGAKKN 201
           D+   ++++KG VPG   N
Sbjct: 180 DNDLKVVMIKGAVPGKPGN 198


>gi|308070975|ref|YP_003872580.1| 50S ribosomal protein L3 [Paenibacillus polymyxa E681]
 gi|310644202|ref|YP_003948961.1| 50S ribosomal protein l3 [Paenibacillus polymyxa SC2]
 gi|305860254|gb|ADM72042.1| 50S ribosomal protein L3 [Paenibacillus polymyxa E681]
 gi|309249153|gb|ADO58720.1| 50S ribosomal protein L3 [Paenibacillus polymyxa SC2]
          Length = 207

 Score =  132 bits (333), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 117/208 (56%), Gaps = 4/208 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT V+  EG  + VTV+    C V+  + L+ +GY A+Q+G  + K K  +K
Sbjct: 3   GILGKKLGMTQVFTPEGNVLAVTVIEAGPCVVLQKKDLENDGYEAIQLGFSDKKEKRSNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G     N +PK+ + E R   D     VG       FT G+ VDVTG++ GKGF+G 
Sbjct: 63  PEAGHAKKANTAPKRYVRELR-GIDLAAYEVGQELKADVFTEGEFVDVTGISKGKGFAGV 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR         HG S  HR  GS G  Q   RV K K + G MG   VT++ LEVV +D
Sbjct: 122 IKRWGQSRGPMAHG-SRYHRGPGSMGSIQ-ANRVPKGKHLPGHMGHETVTIQRLEVVKID 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +R ++LVKG +PG  KNS++ V ++ K
Sbjct: 180 TERNVLLVKGSIPGP-KNSFVKVLETVK 206


>gi|15224205|ref|NP_181831.1| ribosomal protein L3 family protein [Arabidopsis thaliana]
 gi|42559537|sp|Q9SKX4|RK3A_ARATH RecName: Full=50S ribosomal protein L3-1, chloroplastic; Flags:
           Precursor
 gi|4531443|gb|AAD22128.1| 50S ribosomal protein L3 [Arabidopsis thaliana]
 gi|110740515|dbj|BAE98363.1| 50S ribosomal protein L3 [Arabidopsis thaliana]
 gi|208879532|gb|ACI31311.1| At2g43030 [Arabidopsis thaliana]
 gi|330255107|gb|AEC10201.1| 50S ribosomal protein L3-1 [Arabidopsis thaliana]
          Length = 271

 Score =  132 bits (333), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 112/199 (56%), Gaps = 2/199 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62
           GV+  KLGM   +  +G  +PVTV+      +V   +TL  +GY AVQ+G    + K ++
Sbjct: 57  GVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYDAVQIGYRRVRDKKLT 116

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G        P + L EFR+   +   P   +     F  G LVDV G TIGKGF G
Sbjct: 117 KPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGDLVDVAGTTIGKGFQG 176

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRH+F   + THG S SHR+ GS G    PGRV+K KKM GRMGG R  ++ L++V V
Sbjct: 177 GIKRHHFKRGQMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTRTKIRKLKIVKV 235

Query: 183 DDKRGLILVKGCVPGAKKN 201
           D +  ++++KG +PG   N
Sbjct: 236 DKELNVVMIKGALPGKPGN 254


>gi|282891949|ref|ZP_06300428.1| hypothetical protein pah_c200o113 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498209|gb|EFB40549.1| hypothetical protein pah_c200o113 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 220

 Score =  132 bits (333), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/214 (37%), Positives = 121/214 (56%), Gaps = 10/214 (4%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV------ 58
           ++ +K GMT  ++  G  I  TV+ ++   V   +T +K+GY AVQ+G  + +       
Sbjct: 5   LMGKKRGMTQRFDEAGNLIVCTVIEVEPNVVTQLKTKEKDGYNAVQLGFEKIEANDPRTV 64

Query: 59  -KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
            +  SKP++G ++   V P++   EFR++ D     +G       F     +DV G++ G
Sbjct: 65  KRRTSKPLQGHYAKAGVEPRRFSGEFRIE-DSAEFSLGQELKVDLFKEAGYLDVIGVSKG 123

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KG+ G MK HNFGG  A HG    HR  GSTG R  PGR     K A  MG +RVTV+NL
Sbjct: 124 KGYQGVMKLHNFGGGPAAHGSGF-HRHAGSTGMRSTPGRCLPGGKRASHMGVDRVTVENL 182

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           ++V VD++  LILV+G VPGA  +S + +R++ K
Sbjct: 183 KIVLVDEENNLILVQGQVPGA-YDSLLFLREARK 215


>gi|71894653|ref|YP_278761.1| 50S ribosomal protein L3 [Mycoplasma synoviae 53]
 gi|109893527|sp|Q4A5C1|RL3_MYCS5 RecName: Full=50S ribosomal protein L3
 gi|71851441|gb|AAZ44050.1| 50S ribosomal protein L3 [Mycoplasma synoviae 53]
          Length = 268

 Score =  132 bits (332), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/210 (40%), Positives = 120/210 (57%), Gaps = 6/210 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT +Y+  G  IPVTV+ +    V    T   NGY AVQ+   + + K  +K
Sbjct: 3   GILGRKVGMTQIYSETGTAIPVTVIEVKPNVVTKVLTKQSNGYEAVQLSVFDKREKLSNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F   N +PK+ + E R     +L   G     + F+VG+LVDV+G + GKGF+GA
Sbjct: 63  PETGHFKKANTTPKRFVKEIRNMNGYEL---GQSVLVNIFSVGELVDVSGTSKGKGFAGA 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181
           +KR+N      +HG     +    TG   D    RVFK   M G +G  + T++NLEVV 
Sbjct: 120 IKRYNQHIGPKSHGGGGGSQPIRQTGSLGDISGNRVFKGMTMPGHLGSEKATLQNLEVVK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           VD K  L+LVKG VPGA KNS+++V+ + K
Sbjct: 180 VDLKENLLLVKGSVPGA-KNSFVVVKSAVK 208


>gi|183221347|ref|YP_001839343.1| 50S ribosomal protein L3 [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911440|ref|YP_001962995.1| 50S ribosomal protein L3 [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|226730528|sp|B0SAF4|RL3_LEPBA RecName: Full=50S ribosomal protein L3
 gi|226730529|sp|B0SSH7|RL3_LEPBP RecName: Full=50S ribosomal protein L3
 gi|167776116|gb|ABZ94417.1| 50S Ribosomal protein L3 [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779769|gb|ABZ98067.1| 50S ribosomal protein L3 [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 207

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/202 (42%), Positives = 114/202 (56%), Gaps = 6/202 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGM  ++N +G+ + VTVL +  C V   +T   +GY AVQ+  G+AK K+
Sbjct: 1   MAKGLIGEKLGMAHIFNNDGKMVTVTVLRVGPCFVSQVKTEANDGYEAVQLAFGDAKEKH 60

Query: 61  VSKPMRGFFSSVNV-SPKKKLFEFRVQKDDDLLPVGS-VFSPSYFTVGQLVDVTGMTIGK 118
           ++K   G     N+ +PKK L EF   K  + + VGS V     F +   V VTG + GK
Sbjct: 61  LTKAELGHIKKANIATPKKTLVEF---KGFEGVAVGSEVKLADIFALDDTVKVTGTSKGK 117

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           G  G +KRH F G  A HG S   R  GS G    PGRVFK  KM GRMG  + TV+NL+
Sbjct: 118 GTQGVVKRHGFAGGPAGHG-SRFQRHPGSIGSNTTPGRVFKGLKMGGRMGSEQTTVRNLK 176

Query: 179 VVSVDDKRGLILVKGCVPGAKK 200
           VV +D    L+ V G VPG ++
Sbjct: 177 VVKIDADANLVFVSGPVPGRER 198


>gi|325117734|emb|CBZ53285.1| putative ribosomal protein L3p [Neospora caninum Liverpool]
          Length = 407

 Score =  132 bits (331), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 79/193 (40%), Positives = 112/193 (58%), Gaps = 3/193 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K+GM  +++  G R  VTV  +D C V+  RTLDK+GY A  +G G   +  V
Sbjct: 153 RTGLLAYKIGMMSLWDGWGERHAVTVCQVDRCVVMEQRTLDKDGYEACVMGIGYQPIHKV 212

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KPM G +    + PK ++ EF+    D LLPVG   S  +FT GQ V V+G +  KG+ 
Sbjct: 213 TKPMLGVYIRSRIEPKSRIAEFKCS-SDCLLPVGHEMSVRHFTPGQHVFVSGWSKDKGYL 271

Query: 122 GAMKRHNFGGLRATHGVSI-SHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           G  KR  F G  A+HGV   +H S GS G  +    V++ KKMAG  GG+   V N +V 
Sbjct: 272 GVKKRWGFAGQNASHGVEAKAHSSPGSIGQSKTVNVVWRFKKMAGHAGGDPRVV-NCKVF 330

Query: 181 SVDDKRGLILVKG 193
            ++ +R LI +KG
Sbjct: 331 RIEAQRNLIFLKG 343


>gi|90962406|ref|YP_536322.1| 50S ribosomal protein L3 [Lactobacillus salivarius UCC118]
 gi|227891544|ref|ZP_04009349.1| 50S ribosomal protein L3 [Lactobacillus salivarius ATCC 11741]
 gi|123269876|sp|Q1WS90|RL3_LACS1 RecName: Full=50S ribosomal protein L3
 gi|90821600|gb|ABE00239.1| LSU ribosomal protein L3P [Lactobacillus salivarius UCC118]
 gi|227866691|gb|EEJ74112.1| 50S ribosomal protein L3 [Lactobacillus salivarius ATCC 11741]
 gi|300215031|gb|ADJ79447.1| 50S ribosomal protein L3 [Lactobacillus salivarius CECT 5713]
          Length = 207

 Score =  132 bits (331), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/210 (38%), Positives = 123/210 (58%), Gaps = 9/210 (4%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V+   G  +PVTV+ +D+  V+  +T++ +GY A+Q+G  + +    +K
Sbjct: 5   GILGKKVGMTQVFTENGELVPVTVVKVDSNVVLQVKTMENDGYEAIQLGFDDLREVLTNK 64

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           P +G  +  N +PK+ + E R   D +L    VG       F  G  VDVTG + G GF 
Sbjct: 65  PAKGHAAKANTTPKRFVREIR---DVELGEYKVGDEVKADIFEAGDFVDVTGTSKGHGFQ 121

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G++KR+        HG S  HR  GS G   +  RV K K + GRMGGNRVT++NLE+V 
Sbjct: 122 GSIKRNGQHRGPMAHG-SRYHRRPGSMGVIIN--RVMKGKLLPGRMGGNRVTIQNLEIVK 178

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            D + G++L+KG VPGA K S + ++ + K
Sbjct: 179 ADTENGVLLIKGNVPGANK-SLVTIKSTVK 207


>gi|47212780|emb|CAF95545.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 336

 Score =  132 bits (331), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 117/212 (55%), Gaps = 8/212 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGY----MAVQVGAGEAK 57
           R G+VA KLGM  ++   G R  VT+L + +C V+  + L K  Y     A+ VG   A 
Sbjct: 84  RVGLVAVKLGMAPIWTKAGERHVVTMLQVQDCHVI--KYLPKEEYDGHTAALVVGGKNAS 141

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
               S+     F +  V PK+K+  F++  DD L+  G+    ++F  GQ VDVT  +IG
Sbjct: 142 PFYKSEQQMEMFRNAGVPPKQKITTFKIS-DDALIKPGTPLYAAHFRPGQYVDVTAKSIG 200

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF G MKR  F G  A+HG + +HR  G++G   DP +VFK KKM G MG   +T   L
Sbjct: 201 KGFQGVMKRWGFKGQPASHGQTKTHRRPGASGPGGDPAKVFKGKKMPGMMGNIYITAFGL 260

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           ++  V+ K  ++ V G VPG  +N  + VRD+
Sbjct: 261 KIWRVNTKYNVLYVHGSVPG-HRNCLLKVRDT 291


>gi|302842094|ref|XP_002952591.1| plastid/chloroplast ribosomal protein L3 [Volvox carteri f.
           nagariensis]
 gi|300262230|gb|EFJ46438.1| plastid/chloroplast ribosomal protein L3 [Volvox carteri f.
           nagariensis]
          Length = 259

 Score =  132 bits (331), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/201 (41%), Positives = 109/201 (54%), Gaps = 11/201 (5%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62
           GV+  K GM   +   G  +P TV+ L+   VV   +T D +GY AVQVG      + V+
Sbjct: 45  GVLGTKAGMMSYFTENGLCVPATVIALEEGNVVTQVKTEDTDGYNAVQVGYKAVAERKVT 104

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKD----DDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           KP  G      V P + L EF++ KD    +   P   +   S    G+ VD+ G+T+GK
Sbjct: 105 KPELGHLKKAGVQPMRHLVEFKL-KDRATVESYQPGQELDVSSLLKEGEAVDIAGVTVGK 163

Query: 119 GFSGAMKR--HNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           GF G +KR  H  G +  THG S SHR HGS G    P RVF   KMAG+MG  R TVKN
Sbjct: 164 GFQGTIKRWHHKRGAM--THG-SKSHREHGSIGSATTPSRVFPGLKMAGQMGNVRATVKN 220

Query: 177 LEVVSVDDKRGLILVKGCVPG 197
             ++ VD +R  ++VKG VPG
Sbjct: 221 QTLLKVDSERRALIVKGSVPG 241


>gi|85057802|ref|YP_456718.1| 50S ribosomal protein L3P [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|109893411|sp|Q2NIV4|RL3_AYWBP RecName: Full=50S ribosomal protein L3
 gi|84789907|gb|ABC65639.1| LSU ribosomal protein L3P [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 221

 Score =  132 bits (331), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/215 (36%), Positives = 123/215 (57%), Gaps = 9/215 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+N +G  +PVT++ +    V+  + +D++GY A Q+G  + + KN
Sbjct: 1   MAQGILGKKIGMTQVFNEQGELVPVTIVDVAANVVLQQKNVDQDGYQATQIGFCDKREKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL----LPVGSVFSPSYFTVGQLVDVTGMTI 116
            SKPM G F     +PK+ + E     D +     L VG++ +   F VG LVDVTG + 
Sbjct: 61  TSKPMLGHFKKATTAPKRFIKEINFSSDVNSNLANLVVGALITNDLFQVGDLVDVTGTSK 120

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           GKGF+G++KRHN      +HG     R H   G         K KK+ G MG   VT++N
Sbjct: 121 GKGFAGSIKRHNQSRGPESHG----SRYHRRPGSMGPIKGKLKGKKLPGHMGYETVTIQN 176

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           L ++S+D ++ L L+KG VPG  K  +++++ + K
Sbjct: 177 LAILSIDTEKNLFLIKGNVPGPNK-GFVMIKSAVK 210


>gi|257064320|ref|YP_003143992.1| LSU ribosomal protein L3P [Slackia heliotrinireducens DSM 20476]
 gi|256791973|gb|ACV22643.1| LSU ribosomal protein L3P [Slackia heliotrinireducens DSM 20476]
          Length = 206

 Score =  131 bits (330), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/199 (43%), Positives = 117/199 (58%), Gaps = 2/199 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M + +  +K+GMT ++N + + +P TV+  +  +V   +T D +GY AVQ+G G  K + 
Sbjct: 1   MINAIYGKKIGMTQLFNEDEKVVPCTVIVAEPNKVCQIKTTDTDGYEAVQLGFGAIKPQK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM G F+ +   P + L E RV+   D   VG + +   F   + V VTG +IGKGF
Sbjct: 61  VNKPMAGHFAKLGTEPTRYLREVRVENAADY-KVGDLQTVEAFADVKKVHVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH F G    HG    HR+ GS G    P RV K  +M G MG N VT KNLEVV
Sbjct: 120 QGVIKRHGFRGGPGGHGAHF-HRAPGSVGMCATPSRVLKGVRMPGHMGCNTVTTKNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAK 199
            +D ++ LILVKG VPGAK
Sbjct: 179 RIDAEQNLILVKGAVPGAK 197


>gi|326511938|dbj|BAJ95950.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326521546|dbj|BAK00349.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 264

 Score =  131 bits (330), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/201 (38%), Positives = 114/201 (56%), Gaps = 4/201 (1%)

Query: 4   GVVARKLGMTCVYN-IEGRRIPVTVLHL-DNCQVVVH-RTLDKNGYMAVQVGAGEAKVKN 60
           GV+A K+GM   ++   G+ +PVTV+   +   VV   +T   +GY AVQVG    +   
Sbjct: 48  GVMATKVGMMTYFDPANGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVREDK 107

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G     +  P + L EFR+   D   P   +     F  G LVDV+  +IGKGF
Sbjct: 108 LTRPELGHLGKASAPPLRHLQEFRLVAVDAFDPGQELEFNELFKEGDLVDVSAKSIGKGF 167

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRHNF     THG S SHR+ GS G    PGRV+K KKM GRMGG +  ++ L++V
Sbjct: 168 QGGIKRHNFKRGLMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIV 226

Query: 181 SVDDKRGLILVKGCVPGAKKN 201
            +D+   ++++KG +PG + N
Sbjct: 227 RIDNDLKVVMIKGAIPGKQGN 247


>gi|325973271|ref|YP_004250335.1| 50S ribosomal protein L3 [Mycoplasma suis str. Illinois]
 gi|325989706|ref|YP_004249405.1| 50S ribosomal protein L3 [Mycoplasma suis KI3806]
 gi|323574791|emb|CBZ40451.1| 50S ribosomal protein L3 [Mycoplasma suis]
 gi|323651873|gb|ADX97955.1| 50S ribosomal protein L3 [Mycoplasma suis str. Illinois]
          Length = 230

 Score =  131 bits (330), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/205 (38%), Positives = 120/205 (58%), Gaps = 6/205 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVK 59
           M   V+ +K+GM+ +++  G  IPVT+L L   QV+  +T++K GY A+ VG GE  + +
Sbjct: 1   MSREVICQKIGMSSIFSEGGELIPVTLLKLIPLQVLSCKTVEKEGYNALVVGVGEECEER 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGK 118
            +SKP+RG F    V+ ++K+ E       +   VG+  S S  F +G+ + + G++ G 
Sbjct: 61  KLSKPVRGQFQKKGVALRRKITELSWDGIKEY-SVGNFVSFSDLFQIGEKIKIQGVSRGM 119

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ---DPGRVFKNKKMAGRMGGNRVTVK 175
           GF+GA+KR NF     THG    HR  GS    +    P +V+K KKM+GRMGG   T+ 
Sbjct: 120 GFTGAIKRWNFATGPKTHGAGYPHRFQGSLETGRGGMSPQKVWKGKKMSGRMGGENCTIL 179

Query: 176 NLEVVSVDDKRGLILVKGCVPGAKK 200
           NL +V +D +  ++ VKG +PG KK
Sbjct: 180 NLRIVHIDSENNIVAVKGSIPGRKK 204


>gi|168034315|ref|XP_001769658.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679007|gb|EDQ65459.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 223

 Score =  131 bits (330), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 77/199 (38%), Positives = 107/199 (53%), Gaps = 2/199 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62
           G++  K+GM   +  +G  +P TV+      +V   +T   +GY AVQVG    + + ++
Sbjct: 9   GLMGTKMGMMTYFTEDGIAVPCTVVGFHEGNIVTQVKTDATDGYTAVQVGYRRVRDRKLT 68

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G  + V   P + L EFRV   +   P   +     F  G L+DV G +IGKGF G
Sbjct: 69  KPQLGHLNKVGAIPMRHLQEFRVVSAEGFEPNQRLQLEEMFKAGDLIDVVGDSIGKGFQG 128

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR+NF   + THG S S R  GS G    PGRV+  KKM G+MG  R  V+ LE+V V
Sbjct: 129 GIKRYNFARGQMTHG-SKSKRQLGSIGAGTTPGRVYPGKKMPGQMGSGRTKVRKLEIVKV 187

Query: 183 DDKRGLILVKGCVPGAKKN 201
           D +   +L+KG VPG   N
Sbjct: 188 DPELRAVLIKGSVPGKPGN 206


>gi|269215705|ref|ZP_06159559.1| 50S ribosomal protein L3 [Slackia exigua ATCC 700122]
 gi|269131192|gb|EEZ62267.1| 50S ribosomal protein L3 [Slackia exigua ATCC 700122]
          Length = 206

 Score =  131 bits (330), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/199 (44%), Positives = 116/199 (58%), Gaps = 2/199 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M + +  +KLGMT ++N   + +PVTV+  +   V   +T + +GY AVQ+G G  K K 
Sbjct: 1   MINAIYGKKLGMTQLFNENDQVVPVTVIVAEPNTVCQVKTKETDGYEAVQLGFGAIKAKK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM G F+   V P + L E RV+   D   VG   +   F   + V VTG +IGKGF
Sbjct: 61  VNKPMGGHFAKSGVEPTRHLREVRVESAADY-KVGDTQTVEAFADVKKVHVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH F G    H  +  HR+ GS G    P RVFK  +M G MG + VT KNLEVV
Sbjct: 120 QGVIKRHGFAGGPGGH-GAHFHRAPGSVGQCATPSRVFKGVRMPGHMGTDTVTTKNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAK 199
            +D ++ LILVKG VPGAK
Sbjct: 179 RIDAEQNLILVKGAVPGAK 197


>gi|258620527|ref|ZP_05715565.1| 50S ribosomal protein L3 [Vibrio mimicus VM573]
 gi|258587406|gb|EEW12117.1| 50S ribosomal protein L3 [Vibrio mimicus VM573]
          Length = 167

 Score =  131 bits (330), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 72/160 (45%), Positives = 100/160 (62%), Gaps = 1/160 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY A+QV AG  K   V+K
Sbjct: 3   GLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V   + L+EFR++  ++   VGS  +   F   + VDVTG + GKGF GA
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQGA 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
           +KR NF     THG S+SHR+ GS G  Q PGRVFK KK+
Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKI 161


>gi|167755912|ref|ZP_02428039.1| hypothetical protein CLORAM_01432 [Clostridium ramosum DSM 1402]
 gi|167703904|gb|EDS18483.1| hypothetical protein CLORAM_01432 [Clostridium ramosum DSM 1402]
          Length = 242

 Score =  131 bits (330), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 87/220 (39%), Positives = 125/220 (56%), Gaps = 12/220 (5%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+  +G  IPVTV+  D   V+  +T+  +GY A+QVG  + + K  +K
Sbjct: 3   GILGRKIGMTQVFTTDGLLIPVTVVEADANVVLQKKTVATDGYDAIQVGFEDKREKLANK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLL--PVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
              G     N +PK+ + EFR    D+++   VG   +   F  G++VDVTG + GKG+ 
Sbjct: 63  AELGIVKKANTAPKRFIKEFRY---DEMMSYEVGDKITVDSFVAGEVVDVTGTSKGKGYQ 119

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRH        HG S +HR  GS G    P R+   KK+ G+MG    TV+NLEVV+
Sbjct: 120 GVIKRHGQRIGPKGHG-SGAHRIVGSMGPIA-PNRIAPGKKLPGQMGHVTRTVQNLEVVA 177

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
           VD +  L+L+KG VPG KK   I+     KS +   GKV+
Sbjct: 178 VDVENNLLLIKGSVPGPKKGLVIV-----KSGIKAAGKVN 212


>gi|94502245|ref|ZP_01308731.1| ribosomal protein L3 [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|161833819|ref|YP_001598015.1| 50S ribosomal subunit protein L3 [Candidatus Sulcia muelleri GWSS]
 gi|189029486|sp|A8Z668|RL3_SULMW RecName: Full=50S ribosomal protein L3
 gi|94451216|gb|EAT14155.1| ribosomal protein L3 [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|152206309|gb|ABS30619.1| 50S ribosomal subunit protein L3 [Candidatus Sulcia muelleri GWSS]
          Length = 206

 Score =  131 bits (329), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 78/206 (37%), Positives = 128/206 (62%), Gaps = 5/206 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ + +GMT +Y+  G  +P +++    C V+  +T +K+GY + Q+G  E K KN +
Sbjct: 2   SGIIGKNIGMTSMYDESGFNVPCSIIEAGPCIVLQIKTKEKDGYDSCQLGFDEKKYKNTN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+  FF     +PKKK+FE  ++ +   +  G++   + F   +LV++TG + GKGF G
Sbjct: 62  KPLLFFFKKFKSTPKKKIFELPIKGN---IKSGNIIKLNCFHENELVNITGFSKGKGFQG 118

Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH F G+   +HG     R+ GS G   DP RVFK  +MAGRMG  +VT+KN +++ 
Sbjct: 119 VVKRHGFSGVGERSHGQHNRSRAPGSIGAGSDPSRVFKGTRMAGRMGNKKVTLKNRKILK 178

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           +D     +++KG VPGA KNS+++++
Sbjct: 179 IDLLNNFLIIKGSVPGA-KNSYLIIK 203


>gi|293363580|ref|ZP_06610336.1| 50S ribosomal protein L3 [Mycoplasma alligatoris A21JP2]
 gi|292552929|gb|EFF41683.1| 50S ribosomal protein L3 [Mycoplasma alligatoris A21JP2]
          Length = 277

 Score =  131 bits (329), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 81/210 (38%), Positives = 118/210 (56%), Gaps = 6/210 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT +Y   G R+ VTV+ +    V    + DKNGY+A Q+   + K    +K
Sbjct: 3   GILGRKVGMTQIYTELGTRVAVTVIEVQPNVVTKVLSSDKNGYVATQLAVFDKKASRSNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+  N +PK+ + E R   D     +G +   + F VG LVDVTG + GKGF+G 
Sbjct: 63  PETGHFAKANTTPKRYVKEVR---DMSGYELGQLVQANIFKVGDLVDVTGTSKGKGFAGT 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181
           +KRHN      +HG     +    TG   D    +V K   M G++G  + TV+NLEVV 
Sbjct: 120 IKRHNQHIGPKSHGGGGGSQPVRQTGSLGDIAGNKVVKGMTMPGQLGNVKTTVQNLEVVK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           VD K  L+L+KG +PG KK S+++V++  K
Sbjct: 180 VDLKNNLLLIKGSIPGPKK-SFVMVKEGVK 208


>gi|168282378|ref|ZP_02690045.1| ribosomal protein L3 [Ureaplasma parvum serovar 14 str. ATCC 33697]
 gi|182675690|gb|EDT87595.1| ribosomal protein L3 [Ureaplasma parvum serovar 14 str. ATCC 33697]
          Length = 233

 Score =  131 bits (329), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 82/215 (38%), Positives = 120/215 (55%), Gaps = 11/215 (5%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+S ++  K+GMT V+   G+ +  TV++++  +V+  +T +K+GY A+Q+G    K K 
Sbjct: 1   MKS-LLGTKVGMTQVFTETGKAVAATVIYVEPNKVLAVKTNEKDGYSAIQIGYETVKEKA 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+ G F   N  PK+ + EFR    D +  VG+  + S F  GQLV+    T G GF
Sbjct: 60  LNKPLLGQFKKANSDPKRHIKEFR----DAVAEVGAELTVSEFEPGQLVNAQAYTKGHGF 115

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGST----GCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           +G++KRHNF      HG    HR  GS     G  Q   RVFK  K+ G  G   VT KN
Sbjct: 116 TGSIKRHNFSMGPMGHGAGYPHRYVGSIAKGRGGSQAQ-RVFKGTKLPGHYGHELVTTKN 174

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           L V+ V     LIL+KG +PG  K S +L++ + K
Sbjct: 175 LLVLDVKANENLILIKGAIPGP-KGSIVLLKSAKK 208


>gi|303282635|ref|XP_003060609.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226458080|gb|EEH55378.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 215

 Score =  131 bits (329), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 83/200 (41%), Positives = 113/200 (56%), Gaps = 6/200 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62
           GV   K GMT ++  +G  +PVTV+ +    VV   +T   +GY AVQVG  +     ++
Sbjct: 6   GVFGNKAGMTQLFMDDGLCVPVTVIAVQAGNVVTQVKTEGTDGYNAVQVGYDQVADYKIT 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFS 121
           KP  G  +   V P + L EFR+++  D  P G    PS  F  G +VDV G +IGKG+ 
Sbjct: 66  KPEVGHCAKAGVPPMRHLEEFRLKEASDHAP-GQQLKPSEMFKEGDVVDVRGTSIGKGWQ 124

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           GA+K++ F     THG S SHR HGS G    PGR+F  KKM  +MG   VT + L+V+ 
Sbjct: 125 GAVKKYGFSRGLMTHG-SKSHRQHGSVGAGTSPGRIFPGKKMHSQMGNETVTARKLKVMR 183

Query: 182 VDDKRGLILVKGCVPGAKKN 201
           V+D    I+VKG VPG + N
Sbjct: 184 VEDD--CIIVKGSVPGKRGN 201


>gi|15639182|ref|NP_218628.1| 50S ribosomal protein L3 [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189025422|ref|YP_001933194.1| 50S ribosomal protein L3 [Treponema pallidum subsp. pallidum SS14]
 gi|6094076|sp|O83219|RL3_TREPA RecName: Full=50S ribosomal protein L3
 gi|226730585|sp|B2S2D6|RL3_TREPS RecName: Full=50S ribosomal protein L3
 gi|3322453|gb|AAC65174.1| ribosomal protein L3 (rplC) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189017997|gb|ACD70615.1| ribosomal protein L3 [Treponema pallidum subsp. pallidum SS14]
 gi|291059596|gb|ADD72331.1| 50S ribosomal protein L3 [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 208

 Score =  131 bits (329), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 80/202 (39%), Positives = 117/202 (57%), Gaps = 4/202 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT +++  G   PVTV+ +++  VV  + +++ GY AV +G G  K   +SK
Sbjct: 3   GLIGQKVGMTQIFDARGCVTPVTVIRVEHNVVVGLKDVERFGYSAVILGTGCMKKSRISK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   + P + + EFR    D  + VG V         + +DV  ++ GKGF G 
Sbjct: 63  PYAGQFAE-RIPPVRVMREFRGFTLD--VSVGQVLDVRVLESVRYLDVCALSKGKGFQGV 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR  F G R++HG S  HR  GSTG    PGR FKN KM GRMG  RVTV+NL +  +D
Sbjct: 120 VKRWGFSGGRSSHG-SKFHREAGSTGQCTSPGRTFKNVKMPGRMGAERVTVQNLRIERID 178

Query: 184 DKRGLILVKGCVPGAKKNSWIL 205
              G+++V+G VPG  K +  L
Sbjct: 179 VGLGVVMVRGAVPGRNKATVFL 200


>gi|159485314|ref|XP_001700690.1| plastid ribosomal protein L3 [Chlamydomonas reinhardtii]
 gi|158272032|gb|EDO97839.1| plastid ribosomal protein L3 [Chlamydomonas reinhardtii]
          Length = 259

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/201 (40%), Positives = 112/201 (55%), Gaps = 11/201 (5%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62
           GV+  K GM   +  +G  +P TV+ L+   VV   +T D +GY AVQ+G      K V+
Sbjct: 45  GVLGTKAGMMSYFTEDGLCVPATVIALEEGNVVTQVKTQDTDGYNAVQIGYKATAEKRVT 104

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKD----DDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           KP  G      V P + L EF++ KD    +   P  ++   +    G+ VD+ G+T+GK
Sbjct: 105 KPELGHLKKAGVPPMRHLVEFKL-KDRAAVEAYQPGQALDVAALLKEGEPVDIAGITVGK 163

Query: 119 GFSGAMKR--HNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           GF G +KR  H  G +  +HG S SHR HGS G    P RVF   KMAG+MG  R+TVKN
Sbjct: 164 GFQGTIKRWHHKRGAM--SHG-SKSHREHGSIGSATTPSRVFPGLKMAGQMGNVRMTVKN 220

Query: 177 LEVVSVDDKRGLILVKGCVPG 197
             ++ VD +R  ++VKG VPG
Sbjct: 221 QSLLKVDTERHALVVKGSVPG 241


>gi|84997293|ref|XP_953368.1| 50S ribosomal protein L3 [Theileria annulata strain Ankara]
 gi|65304364|emb|CAI76743.1| 50S ribosomal protein L3, putative [Theileria annulata]
          Length = 347

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/198 (40%), Positives = 113/198 (57%), Gaps = 5/198 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           RSGV+A K+G   +++  G R  VTV  +D C V+  RT++K+GY A+Q+G G   +K  
Sbjct: 88  RSGVLAYKIGCMSLWDDWGVRHAVTVCQVDRCVVLEKRTIEKHGYEALQLGLGYKNIKQQ 147

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SKP  G F  +    K  + EF+    D LLP G  FS  +FT GQ V V+G +  KGF 
Sbjct: 148 SKPNIGRFIKLGTGSKNHIAEFKCS-SDCLLPEGHYFSVRHFTPGQWVFVSGWSKAKGFK 206

Query: 122 GAMKRHNFGGLRATHGVSI-SHRSHGSTGCRQDPGRVFKNKKMAGRMGGN-RVTVKNLEV 179
           GAM+R +FGG   +HG    +H + GS    +    V++N KM G +G + RVT  N  V
Sbjct: 207 GAMRRWSFGGQNQSHGTECKAHSAPGSISQGKSVHIVWRNTKMGGHVGPDPRVT--NCRV 264

Query: 180 VSVDDKRGLILVKGCVPG 197
             ++  R LI +KG +PG
Sbjct: 265 FRIETHRNLIFLKGAIPG 282


>gi|149928568|ref|ZP_01916792.1| ribosomal protein L3 [Limnobacter sp. MED105]
 gi|149822709|gb|EDM81972.1| ribosomal protein L3 [Limnobacter sp. MED105]
          Length = 126

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/121 (55%), Positives = 86/121 (71%), Gaps = 1/121 (0%)

Query: 92  LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151
           L VG+  S   F  GQ VDV+G+T GKGFSGA+KRH+F   RA+HG SISH + GS G  
Sbjct: 5   LQVGAAVSAEIFAPGQKVDVSGVTQGKGFSGAIKRHHFSSQRASHGNSISHNAPGSIGMA 64

Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           QDPGRVF  K+MAG++G    T +NLEVV VD +RGL+L+KG VPG+ K   +LV+ + K
Sbjct: 65  QDPGRVFPGKRMAGQLGNVNRTTQNLEVVRVDAERGLLLIKGAVPGS-KGGQLLVKPAVK 123

Query: 212 S 212
           +
Sbjct: 124 A 124


>gi|163804107|ref|ZP_02197891.1| 50S ribosomal protein L3 [Vibrio sp. AND4]
 gi|159172077|gb|EDP57032.1| 50S ribosomal protein L3 [Vibrio sp. AND4]
          Length = 148

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 68/136 (50%), Positives = 88/136 (64%), Gaps = 1/136 (0%)

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F+   V   + L+EFR++ D++   VG+  +   F   + VDVTG + GKGF G
Sbjct: 1   KAEAGHFAKAGVEAGRGLWEFRLENDEEF-AVGAELTVELFNETKKVDVTGTSKGKGFQG 59

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 60  AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 119

Query: 183 DDKRGLILVKGCVPGA 198
           D +R L+L+KG VPG+
Sbjct: 120 DAERNLLLIKGAVPGS 135


>gi|15674081|ref|NP_268256.1| 50S ribosomal protein L3 [Lactococcus lactis subsp. lactis Il1403]
 gi|281492759|ref|YP_003354739.1| 50S ribosomal protein L3P [Lactococcus lactis subsp. lactis KF147]
 gi|42559688|sp|Q9CDW2|RL3_LACLA RecName: Full=50S ribosomal protein L3
 gi|12725153|gb|AAK06197.1|AE006438_11 50S ribosomal protein L3 [Lactococcus lactis subsp. lactis Il1403]
 gi|281376411|gb|ADA65897.1| LSU ribosomal protein L3P [Lactococcus lactis subsp. lactis KF147]
 gi|326407632|gb|ADZ64703.1| 50S ribosomal protein L3 [Lactococcus lactis subsp. lactis CV56]
          Length = 207

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 122/212 (57%), Gaps = 6/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  ++++ +GY A QVG    +   
Sbjct: 1   MSKGILGKKVGMTQIFTENGELIPVTVIEATPNTVLQVKSVETDGYEATQVGFDTLREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF+  +  +   VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  TNKPAKGHAAKANTTPKRFVREFKGLEGAE---VGAEITVDTFAAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G      +V K KK+AGRMG  RVTV+NL + 
Sbjct: 118 QGPIKRHGQSRGPMAHG-SRYHRRPGSMGPVAA-NKVPKGKKLAGRMGNKRVTVQNLVIA 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ +ILVKG VPGAKK S I+V+ + K+
Sbjct: 176 QVLPEKNVILVKGNVPGAKK-SLIVVKSAIKA 206


>gi|322436546|ref|YP_004218758.1| 50S ribosomal protein L3 [Acidobacterium sp. MP5ACTX9]
 gi|321164273|gb|ADW69978.1| 50S ribosomal protein L3 [Acidobacterium sp. MP5ACTX9]
          Length = 242

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 118/207 (57%), Gaps = 7/207 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVKNVS 62
           G++ +K+GMT +++  G   PVTVL    C +   +T+ K+GY A Q+G  +  K   V+
Sbjct: 5   GILGKKIGMTQIFDERGDVHPVTVLKAGPCVITQLKTMAKDGYDAAQIGYVDFVKASKVT 64

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQK---DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           K M G F+  NV P + + E  +QK   +D  +  G       F   + VDV G + G+G
Sbjct: 65  KAMNGHFAKANVPPVRMIKEVAIQKASAEDAEVKAGDRILVDIFENERFVDVIGTSKGRG 124

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G ++RH FGG   +HG     +  GS G    P RVF  ++M G MG  ++TV+NL +
Sbjct: 125 FAGVIRRHGFGGGPKSHGHMF--QVQGSIGASSFPSRVFPGQRMPGHMGDAQITVRNLRI 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILV 206
            ++D +  LILV+G VPGA ++ ++L+
Sbjct: 183 RAIDVEDNLILVEGAVPGA-RDGYVLI 208


>gi|225706142|gb|ACO08917.1| Mitochondrial 39S ribosomal protein L3 [Osmerus mordax]
          Length = 345

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/210 (39%), Positives = 119/210 (56%), Gaps = 4/210 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59
           R G+VA KLGM  V+   G R  VT+L + +C V+ H T ++ +G+ A + VG   A   
Sbjct: 93  RVGLVAVKLGMAPVWTKSGERHVVTMLQVQDCHVLKHLTKEEYDGHTAALVVGGRNASPF 152

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             ++     F    V PK+K+  F+V  D+ ++  G+    ++F  GQ VDVT  TIGKG
Sbjct: 153 YKTEENMEMFRIAGVPPKQKVTTFKVS-DNAIIKPGTPLHAAHFRPGQYVDVTAKTIGKG 211

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR+ F G  A+HG + +HR  G++G   DP +VFK KKM G MG    T   L+V
Sbjct: 212 FQGVMKRYGFKGQPASHGQTKTHRRPGASGPGGDPAKVFKGKKMPGIMGNIYDTATGLKV 271

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
             ++ K  ++ V G VPG  KN  + VRD+
Sbjct: 272 WRINTKHNVLYVHGSVPG-HKNCLVKVRDT 300


>gi|269115073|ref|YP_003302836.1| 50S ribosomal protein L3 [Mycoplasma hominis]
 gi|268322698|emb|CAX37433.1| 50S ribosomal protein L3 [Mycoplasma hominis ATCC 23114]
          Length = 268

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/214 (36%), Positives = 121/214 (56%), Gaps = 6/214 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT ++  EG+ IPVTV+ +    V    T +KNGY+A+Q+   + K   + K
Sbjct: 3   GILGRKVGMTQLFTSEGKLIPVTVVEVKPNVVTKVLTSEKNGYVALQLATEDKKSSRIIK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P   +F   N +PK+ + E R   D     +G     S FT G++VDVT ++ GKGF+G 
Sbjct: 63  PEVNYFKQANTTPKRFVKEIR---DMSGFSLGDTVDASLFTAGEVVDVTAISKGKGFAGT 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181
           +KR N      +HG     +    TG   D    RV+K   M G +G  +VTV+NLEVV 
Sbjct: 120 IKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVWKGMTMPGHLGAEQVTVQNLEVVK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            D +  ++L+KG VPGA K ++++++ + KS  N
Sbjct: 180 EDAENNILLIKGSVPGA-KGAFLIIKTAKKSIKN 212


>gi|168308532|ref|ZP_02691207.1| ribosomal protein L3 [Ureaplasma parvum serovar 1 str. ATCC 27813]
 gi|171902869|gb|EDT49158.1| ribosomal protein L3 [Ureaplasma parvum serovar 1 str. ATCC 27813]
          Length = 233

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/215 (38%), Positives = 119/215 (55%), Gaps = 11/215 (5%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+S ++  K+GMT V+   G+ +  TV++++  +V+  +T +K+GY A+Q+G    K K 
Sbjct: 1   MKS-LLGTKVGMTQVFTETGKAVAATVIYVEPNKVLAVKTNEKDGYSAIQIGYETVKEKA 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+ G F   N  PK+ + EFR    D    VG+  + S F  GQLV+    T G GF
Sbjct: 60  LNKPLLGQFKKANSDPKRHIKEFR----DVFAEVGAELTVSEFEPGQLVNAQAYTKGHGF 115

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGST----GCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           +G++KRHNF      HG    HR  GS     G  Q   RVFK  K+ G  G   VT KN
Sbjct: 116 TGSIKRHNFSMGPMGHGAGYPHRYVGSIAKGRGGSQAQ-RVFKGTKLPGHYGHELVTTKN 174

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           L V+ V     LIL+KG +PG  K S +L++ + K
Sbjct: 175 LLVLDVKANENLILIKGAIPGP-KGSIVLLKSAKK 208


>gi|125625143|ref|YP_001033626.1| 50S ribosomal protein L3 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|166233151|sp|A2RNQ5|RL3_LACLM RecName: Full=50S ribosomal protein L3
 gi|124493951|emb|CAL98946.1| 50S ribosomal protein L3 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071951|gb|ADJ61351.1| 50S ribosomal protein L3 [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 207

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 122/212 (57%), Gaps = 6/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  ++++ +GY A QVG    +   
Sbjct: 1   MSKGILGKKVGMTQIFTDNGELIPVTVIEATPNTVLQVKSVETDGYEATQVGFDTLREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF+  +  +   VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  TNKPAKGHAAKANTTPKRFVREFKGLEGAE---VGAEITVDTFAAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G      +V K KK+AGRMG  RVTV+NL + 
Sbjct: 118 QGPIKRHGQSRGPMAHG-SRYHRRPGSMGPVAA-NKVPKGKKLAGRMGNKRVTVQNLVIA 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ +ILVKG VPGAKK S I+V+ + K+
Sbjct: 176 QVLPEKNVILVKGNVPGAKK-SLIVVKSAIKA 206


>gi|13357791|ref|NP_078065.1| 50S ribosomal protein L3 [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|167972002|ref|ZP_02554279.1| ribosomal protein L3 [Ureaplasma parvum serovar 6 str. ATCC 27818]
 gi|170762111|ref|YP_001752314.1| 50S ribosomal protein L3 [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|42559705|sp|Q9PQR0|RL3_UREPA RecName: Full=50S ribosomal protein L3
 gi|189029487|sp|B1AIM0|RL3_UREP2 RecName: Full=50S ribosomal protein L3
 gi|11276669|pir||H82914 ribosomal protein L3 UU231 [imported] - Ureaplasma urealyticum
 gi|6899201|gb|AAF30640.1|AE002122_9 ribosomal protein L3 [Ureaplasma parvum serovar 3 str. ATCC 700970]
 gi|168827688|gb|ACA32950.1| ribosomal protein L3 [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|186700755|gb|EDU19037.1| ribosomal protein L3 [Ureaplasma parvum serovar 6 str. ATCC 27818]
          Length = 233

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/215 (38%), Positives = 120/215 (55%), Gaps = 11/215 (5%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+S ++  K+GMT V+   G+ +  TV++++  +V+  +T +K+GY A+Q+G    K K 
Sbjct: 1   MKS-LLGTKVGMTQVFTETGKAVAATVIYVEPNKVLAVKTNEKDGYSAIQIGYETVKEKA 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+ G F   N  PK+ + EFR    D +  VG+  + S F  GQLV+    T G GF
Sbjct: 60  LNKPLLGQFKKANSDPKRHIKEFR----DVVAEVGAELTVSEFEPGQLVNAQAYTKGHGF 115

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGST----GCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           +G++KRHNF      HG    HR  GS     G  Q   RVFK  K+ G  G   VT KN
Sbjct: 116 TGSIKRHNFSMGPMGHGAGYPHRYVGSIAKGRGGSQAQ-RVFKGTKLPGHYGHELVTTKN 174

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           L V+ V     LIL+KG +PG  K S +L++ + K
Sbjct: 175 LLVLDVKANENLILIKGAIPGP-KGSIVLLKSAKK 208


>gi|217967369|ref|YP_002352875.1| ribosomal protein L3 [Dictyoglomus turgidum DSM 6724]
 gi|217336468|gb|ACK42261.1| ribosomal protein L3 [Dictyoglomus turgidum DSM 6724]
          Length = 215

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/201 (39%), Positives = 112/201 (55%), Gaps = 3/201 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RK+GMT ++   G  +PVTV+    C V+  RT +K+GY A+Q+G    K   ++KP
Sbjct: 9   ILGRKIGMTQIFTENGEMVPVTVIRGGPCLVLNVRTKEKDGYDAIQLGFERCKESKLNKP 68

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
             G F  + + P + + E RV+   D    G       F  G+ VD+TG + G GF+G +
Sbjct: 69  QLGIFKKLGLPPFRIIKEVRVKNPLDYTK-GQEIRVDIFQEGEFVDITGKSKGHGFTGHI 127

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR NF   R +HG S  HR   S G       V K +KMAGR G   +TV+NL++V VD 
Sbjct: 128 KRWNFSRGRMSHG-SKFHRRRASIGA-GGVQHVMKGQKMAGRWGNETITVQNLKIVKVDK 185

Query: 185 KRGLILVKGCVPGAKKNSWIL 205
           ++ LILVKG VPG   N  I+
Sbjct: 186 EKDLILVKGAVPGPTGNLLII 206


>gi|255022702|ref|ZP_05294688.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL J1-208]
          Length = 210

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/201 (38%), Positives = 116/201 (57%), Gaps = 4/201 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRR-IPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++ RK      + ++    IPVTV+      V+  +T++ +GY AVQ+G  + +  
Sbjct: 1   MTKGILGRKXXXXXXFLLKTDELIPVTVIEAAQNVVLQKKTVETDGYEAVQIGFEDKRAI 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             +KP +G  +  N +PK+ + EFR   + D   +G+      F  G ++D TG++ GKG
Sbjct: 61  LSNKPEQGHVAKANTTPKRFIREFR-DVNLDEYEIGAEVKVDVFAEGDIIDATGVSKGKG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KRH        HG S  HR  GS G    P RVFKNK + GRMGG ++T++NLE+
Sbjct: 120 FQGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQITIQNLEI 177

Query: 180 VSVDDKRGLILVKGCVPGAKK 200
           V VD ++ ++LVKG VPGAKK
Sbjct: 178 VKVDVEKNVLLVKGNVPGAKK 198


>gi|77414571|ref|ZP_00790714.1| ribosomal protein L3 [Streptococcus agalactiae 515]
 gi|77159369|gb|EAO70537.1| ribosomal protein L3 [Streptococcus agalactiae 515]
          Length = 164

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/169 (46%), Positives = 106/169 (62%), Gaps = 6/169 (3%)

Query: 45  GYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
           GY AVQVG  + +    +KP +G  +  N +PK+ + EF   K+ + L VG+  S   F 
Sbjct: 1   GYEAVQVGFDDKREVLSNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFE 57

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G +VDVTG + GKGF G +KRH        HG S  HR  GS G    P RVFKNK++A
Sbjct: 58  AGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGP-VAPNRVFKNKRLA 115

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           GRMGGNRVTV+NLE+V V  ++ ++L+KG VPGAKK S I ++ + K+A
Sbjct: 116 GRMGGNRVTVQNLEIVQVIPEKNVVLIKGNVPGAKK-SLITIKSAVKAA 163


>gi|167972621|ref|ZP_02554898.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|167988466|ref|ZP_02570137.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|168362040|ref|ZP_02695219.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|195867671|ref|ZP_03079673.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|209553992|ref|YP_002284630.1| 50S ribosomal protein L3 [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225550465|ref|ZP_03771414.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225551135|ref|ZP_03772081.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|226730586|sp|B5ZB40|RL3_UREU1 RecName: Full=50S ribosomal protein L3
 gi|171903367|gb|EDT49656.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|184209454|gb|EDU06497.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188018930|gb|EDU56970.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|195660728|gb|EDX53983.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|209541493|gb|ACI59722.1| 50S ribosomal protein L3 [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225378950|gb|EEH01315.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|225379619|gb|EEH01981.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 233

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/215 (38%), Positives = 120/215 (55%), Gaps = 11/215 (5%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+S ++  K+GMT V+   G+ +  TV++++  +V+  +T +K+GY A+Q+G    K K 
Sbjct: 1   MKS-LLGTKVGMTQVFTETGKAVAATVIYVEPNKVLAVKTNEKDGYNAIQIGYETVKEKA 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+ G F   N  PK+ + EFR    D +  VG+  + S F  GQLV+    T G GF
Sbjct: 60  LNKPLLGQFKKANSDPKRHIKEFR----DVVAEVGAELTVSEFEPGQLVNAQAYTKGHGF 115

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGST----GCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           +G++KRHNF      HG    HR  GS     G  Q   RVFK  K+ G  G   VT KN
Sbjct: 116 TGSIKRHNFSMGPMGHGAGYPHRYVGSIAKGRGGSQAQ-RVFKGTKLPGHYGHELVTTKN 174

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           L V+ V     LIL+KG +PG  K S +L++ + K
Sbjct: 175 LLVLDVKANENLILIKGAIPGP-KGSIVLLKSAKK 208


>gi|160947700|ref|ZP_02094867.1| hypothetical protein PEPMIC_01635 [Parvimonas micra ATCC 33270]
 gi|158446834|gb|EDP23829.1| hypothetical protein PEPMIC_01635 [Parvimonas micra ATCC 33270]
          Length = 208

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/211 (37%), Positives = 121/211 (57%), Gaps = 4/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+S ++ +K+GMT ++  +G  + VTV+      V   +T++ +GY A+Q G  + K K 
Sbjct: 1   MKS-ILGKKIGMTQIFTEDGTVVSVTVVEAGPMFVTQVKTVETDGYNAIQCGYVDKKEKK 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F  V+V  K+ + EFR+  + +    G       F  G  VDV G + GKG 
Sbjct: 60  VTKPLKGHFDKVSVGYKRFVREFRLN-EGETFETGQEIKVDLFAEGDKVDVIGTSKGKGT 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR N+G     HG S SHR  G+      PGRV K +K +G+ G  + TV+NL VV
Sbjct: 119 QGAIKRWNYGRGPEGHG-SKSHRVAGARSAGTYPGRVLKGRKASGKTGNKKSTVQNLVVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD ++ LILVKG +PG  K   + +R++ K
Sbjct: 178 KVDVEKNLILVKGAIPGP-KGGLVTIREAVK 207


>gi|227530205|ref|ZP_03960254.1| ribosomal protein L3 [Lactobacillus vaginalis ATCC 49540]
 gi|227349880|gb|EEJ40171.1| ribosomal protein L3 [Lactobacillus vaginalis ATCC 49540]
          Length = 220

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+   G  +PVTV+ +    V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MAKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQIKTVENDGYNAVQLGFDDKREIL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + E R  +  D + VG       F  G+ VDVTG+T G G+
Sbjct: 61  SNKPEQGHAAKANTTPKRFIGEIRDAELGDDIKVGDEVKADVFNEGETVDVTGVTKGHGY 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G + + N      +HG S  HR  GS G   +  RVFK  K+ GRMGG  VT+++LEVV
Sbjct: 121 QGNIHKDNQSRGPMSHG-SRYHRRPGSLGPIIN--RVFKGMKLPGRMGGKTVTMQHLEVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD    ++L+KG VPGA K S++ +++S K+
Sbjct: 178 KVDLDNNVLLIKGNVPGANK-SYVTIKNSVKA 208


>gi|323340374|ref|ZP_08080631.1| 50S ribosomal protein L3 [Lactobacillus ruminis ATCC 25644]
 gi|323092150|gb|EFZ34765.1| 50S ribosomal protein L3 [Lactobacillus ruminis ATCC 25644]
          Length = 206

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/209 (38%), Positives = 120/209 (57%), Gaps = 8/209 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V+   G  +PVTV+ +    V+  +T++ +GY A+Q+G  + +  NV+K
Sbjct: 5   GILGKKVGMTQVFTENGELVPVTVVEVGTNVVLQVKTVENDGYNAIQLGFDDQRAVNVNK 64

Query: 64  PMRGFFSSVNVSPKKKLFEFR-VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P +G       +PK+ + E R VQ D     VG       F  G +VDVTG + G GF G
Sbjct: 65  PAKGHADKAKTAPKRFVREIRDVQGD---YKVGDEVKADLFEAGDIVDVTGTSKGHGFQG 121

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR         HG S  HR  GS G   +  RV K K + GRMGG RVT++NL++V  
Sbjct: 122 NIKRWGQSRGPMAHG-SRYHRRPGSMGVIIN--RVMKGKMLPGRMGGKRVTIQNLDIVKA 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D + G++L+KG VPGA K S++ ++ + K
Sbjct: 179 DMENGVLLIKGNVPGANK-SYVTIKSTVK 206


>gi|253577179|ref|ZP_04854499.1| 50S ribosomal protein L3 [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251843423|gb|EES71451.1| 50S ribosomal protein L3 [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 207

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 115/208 (55%), Gaps = 4/208 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT V+  EG  IPVTV+   +  V+  + L+ +GY A+Q+G  + K    +K
Sbjct: 3   GILGKKLGMTQVFTPEGNVIPVTVIEASSNVVLQKKDLENDGYEAIQLGYSDKKEARANK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G       +PK+ + E R   D     VG       F  G+ VDVTG++ GKGF G 
Sbjct: 63  PEVGHAKKAGTTPKRYVREIR-GVDLAGYEVGQEVKVDIFAEGEFVDVTGISKGKGFQGV 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR         HG S  HR  GS G      RVFK K + G MG   VT++NLEVV VD
Sbjct: 122 IKRWGQSRGPMAHG-SRYHRRPGSMGSIA-ANRVFKGKNLPGHMGHETVTIQNLEVVKVD 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +R ++LVKG +PG  KNS++ V+ + K
Sbjct: 180 AERNVLLVKGSIPGP-KNSFVKVKQTTK 206


>gi|167975968|ref|ZP_02558245.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|195659702|gb|EDX53082.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
          Length = 226

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/207 (38%), Positives = 115/207 (55%), Gaps = 10/207 (4%)

Query: 9   KLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGF 68
           K+GMT V+   G+ +  TV++++  +V+  +T +K+GY A+Q+G    K K ++KP+ G 
Sbjct: 1   KVGMTQVFTETGKAVAATVIYVEPNKVLAVKTNEKDGYNAIQIGYETVKEKALNKPLLGQ 60

Query: 69  FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
           F   N  PK+ + EFR    D +  VG+  + S F  GQLV+    T G GF+G++KRHN
Sbjct: 61  FKKANSDPKRHIKEFR----DVVAEVGAELTVSEFEPGQLVNAQAYTKGHGFTGSIKRHN 116

Query: 129 FGGLRATHGVSISHRSHGST----GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           F      HG    HR  GS     G  Q   RVFK  K+ G  G   VT KNL V+ V  
Sbjct: 117 FSMGPMGHGAGYPHRYVGSIAKGRGGSQAQ-RVFKGTKLPGHYGHELVTTKNLLVLDVKA 175

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
              LIL+KG +PG  K S +L++ + K
Sbjct: 176 NENLILIKGAIPGP-KGSIVLLKSAKK 201


>gi|286142622|gb|ADC41341.1| ribosomal protein L3 [Streptomyces coelicolor]
 gi|286142624|gb|ADC41342.1| ribosomal protein L3 [Streptomyces coelescens]
 gi|286142626|gb|ADC41343.1| ribosomal protein L3 [Streptomyces violaceoruber]
 gi|286142628|gb|ADC41344.1| ribosomal protein L3 [Streptomyces sp. DSM 40419]
 gi|286142630|gb|ADC41345.1| ribosomal protein L3 [Streptomyces violaceolatus]
 gi|286142632|gb|ADC41346.1| ribosomal protein L3 [Streptomyces lividans]
 gi|286142634|gb|ADC41347.1| ribosomal protein L3 [Streptomyces sp. BTG 4-758]
 gi|286142636|gb|ADC41348.1| ribosomal protein L3 [Streptomyces sp. BTG 4-759]
 gi|286142638|gb|ADC41349.1| ribosomal protein L3 [Streptomyces sp. BTG 6-715]
 gi|286142640|gb|ADC41350.1| ribosomal protein L3 [Streptomyces sp. BTG 6-708]
 gi|286142642|gb|ADC41351.1| ribosomal protein L3 [Streptomyces sp. BTG 717 I]
 gi|286142644|gb|ADC41352.1| ribosomal protein L3 [Streptomyces coelicolor]
 gi|286142646|gb|ADC41353.1| ribosomal protein L3 [Streptomyces sp. BTG 723 I]
 gi|286142648|gb|ADC41354.1| ribosomal protein L3 [Streptomyces sp. BTG 4-723]
 gi|286142650|gb|ADC41355.1| ribosomal protein L3 [Streptomyces sp. BTG 4-738]
 gi|286142652|gb|ADC41356.1| ribosomal protein L3 [Streptomyces coelicolor]
 gi|286142654|gb|ADC41357.1| ribosomal protein L3 [Streptomyces violaceoruber]
          Length = 167

 Score =  129 bits (324), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 97/167 (58%), Gaps = 1/167 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R     +   +G   +   F  G  VDVT  + GKGF+G MKRHNF G 
Sbjct: 61  DVTPRRHLVEIRTAAASEYT-LGQEITAEAFESGVKVDVTAKSKGKGFAGVMKRHNFKGG 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           +A+HG    HR  GS G    PGRVFK  +MAGRMG  RVT +NL V
Sbjct: 120 KASHGAHRVHRMPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTV 166


>gi|255565958|ref|XP_002523967.1| 50S ribosomal protein L3, putative [Ricinus communis]
 gi|223536694|gb|EEF38335.1| 50S ribosomal protein L3, putative [Ricinus communis]
          Length = 285

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/199 (40%), Positives = 113/199 (56%), Gaps = 2/199 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62
           GV+  KLGM   +  +G  +PVTV+      +V   +T   +GY +VQVG    + + ++
Sbjct: 71  GVMGTKLGMMSYFESDGTVVPVTVVGFREGNIVTQIKTEATDGYDSVQVGYRRIRDRKLT 130

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G      V P + L EFR+Q  D       +     F  G LVDV+G+TIGKGF G
Sbjct: 131 KPELGHLEKAGVIPMRHLQEFRLQNIDGFEVGQKLVLEEIFKEGDLVDVSGITIGKGFQG 190

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHNF   + THG S SHR+ GS G    PGRV+K KKM GRMGG +  ++ L++V +
Sbjct: 191 GIKRHNFKRGQMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKI 249

Query: 183 DDKRGLILVKGCVPGAKKN 201
           D+    +++KG +PG   N
Sbjct: 250 DNDLRAVMIKGALPGKPGN 268


>gi|221220576|gb|ACM08949.1| Mitochondrial 39S ribosomal protein L3 [Salmo salar]
          Length = 342

 Score =  129 bits (323), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/211 (39%), Positives = 118/211 (55%), Gaps = 6/211 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQV--GAGEAKV 58
           R G+VA KLGM  V+   G R  VT+L + +C V+ + + +K +G+ A  V  G   +  
Sbjct: 91  RVGLVAVKLGMAPVWTKTGERHVVTMLQVQDCHVLNYLSKEKYDGHTAALVVGGKNASPF 150

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
               + M   F    V PK+K+  F+V  D+ ++  G+    ++F  GQ VDVT  TIGK
Sbjct: 151 YKTDEEME-MFRLAGVPPKQKVTTFKVS-DNAIIKPGTPLYAAHFRPGQYVDVTAKTIGK 208

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G MKR+ F G  A+HG + +HR  G++G   DP +VFK KKM G MG    T   L+
Sbjct: 209 GFQGVMKRYGFKGQPASHGQTKTHRRPGASGPGGDPAKVFKGKKMPGMMGNVFDTAHGLK 268

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           V  V+ K  +I V G VPG  KN  + VRD+
Sbjct: 269 VWRVNTKYNVIYVHGSVPG-HKNCLLKVRDT 298


>gi|270291133|ref|ZP_06197356.1| 50S ribosomal protein L3 [Pediococcus acidilactici 7_4]
 gi|304385414|ref|ZP_07367759.1| 50S ribosomal protein L3 [Pediococcus acidilactici DSM 20284]
 gi|270280529|gb|EFA26364.1| 50S ribosomal protein L3 [Pediococcus acidilactici 7_4]
 gi|304328621|gb|EFL95842.1| 50S ribosomal protein L3 [Pediococcus acidilactici DSM 20284]
          Length = 212

 Score =  129 bits (323), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/210 (37%), Positives = 119/210 (56%), Gaps = 4/210 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V+   G  IPVTV+      V+  +T++ +GY A Q+G  + +    +K
Sbjct: 5   GILGKKVGMTQVFTEAGELIPVTVIDTTPNVVLQLKTVENDGYAAAQLGFDDKRQVLSNK 64

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G  +  N +PK+ + E R  +  + + VG   +   F  G  VDVTG T G GF G 
Sbjct: 65  PEQGHVAKANTNPKRFIHEIRDVELGEDVKVGDKIAADIFEAGDFVDVTGTTKGHGFQGV 124

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +K+         HG S  HR  GS G   +  RVF  KK+ GRMG   VT++NLE+V  D
Sbjct: 125 IKKDGQRRGPMAHG-SRYHRRPGSLGAIIN--RVFPGKKLPGRMGNKTVTIQNLEIVKAD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +  ++LVKG VPGAKK S+++V+ + K+ 
Sbjct: 182 TENNVLLVKGNVPGAKK-SYVVVKSTVKNT 210


>gi|119484833|ref|ZP_01619315.1| 50S ribosomal protein L3 [Lyngbya sp. PCC 8106]
 gi|119457651|gb|EAW38775.1| 50S ribosomal protein L3 [Lyngbya sp. PCC 8106]
          Length = 218

 Score =  129 bits (323), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/203 (40%), Positives = 110/203 (54%), Gaps = 19/203 (9%)

Query: 12  MTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--------VKNVS 62
           MT V++ E G  IPVTV+    C V   +T   +GY A+Q+G GE K        VK+  
Sbjct: 1   MTQVFDAESGIAIPVTVIEAGPCIVTQIKTESTDGYTAIQLGYGEVKNKTRKLNTVKSPG 60

Query: 63  KPMRGFFSSVNVSPKKK--------LFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGM 114
           K +  + S+       K        L E+R++ D     +G       F  GQLVDV+G+
Sbjct: 61  KEVNKYLSNAEQGHLAKSGGQLVRHLREYRIE-DTSSYELGQELKADLFEPGQLVDVSGI 119

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           ++G+GFSG  KRHNF      HG S +HR  GS G    PGRV+  KKMAGR GG ++T 
Sbjct: 120 SMGRGFSGFQKRHNFRRGPMAHG-SKNHRQPGSIGPGTTPGRVYPGKKMAGRYGGKKITT 178

Query: 175 KNLEVVSVDDKRGLILVKGCVPG 197
             L VV +D +R L+L+KG VPG
Sbjct: 179 SKLIVVRIDPERNLLLIKGAVPG 201


>gi|145341932|ref|XP_001416053.1| Plastid ribosomal protein L3, imported to chloroplast, large
           ribosomal subunit [Ostreococcus lucimarinus CCE9901]
 gi|144576277|gb|ABO94345.1| Plastid ribosomal protein L3, imported to chloroplast, large
           ribosomal subunit [Ostreococcus lucimarinus CCE9901]
          Length = 241

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/198 (42%), Positives = 109/198 (55%), Gaps = 6/198 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62
           G    K GMT V+  +G  +PVTV+ + +  VV   +T   +GY AVQVG    +   ++
Sbjct: 26  GAFGSKAGMTQVFTDDGLCVPVTVIAVRDGNVVTQVKTEATDGYNAVQVGYDAVRDDKLT 85

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFS 121
           KP  G          + L EFR+ +D     VG+   P+  F  G  VDV G TIGKGF 
Sbjct: 86  KPELGHCKKAGAPALRHLEEFRL-RDAPTYEVGAQIKPTELFKEGDKVDVRGRTIGKGFQ 144

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           GA+KR+ F     THG S SHR HGS G   +PGR++  K+M G MG   VT K L VVS
Sbjct: 145 GAVKRYGFSRGLMTHG-SKSHRQHGSIGSGTNPGRIYPGKRMHGHMGNEMVTTKGLTVVS 203

Query: 182 VDDKRGLILVKGCVPGAK 199
           V+D    I+VKG VPG K
Sbjct: 204 VEDD--CIIVKGNVPGKK 219


>gi|217073404|gb|ACJ85061.1| unknown [Medicago truncatula]
          Length = 243

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/188 (40%), Positives = 99/188 (52%), Gaps = 2/188 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62
           GV+  KLGM   +   G  +PVTV+      +V   +T   +GY AVQVG    + + ++
Sbjct: 57  GVMGTKLGMMSFFQPNGEVVPVTVVGFKEGNIVTQIKTDATDGYNAVQVGYRRVRDRKLT 116

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G        P   L EFR+Q  D   P   +     F  G LVDV+G TIGKGF G
Sbjct: 117 KPEMGHLEKAGAIPMHHLQEFRLQSVDGFEPNQRLVFDELFNEGDLVDVSGTTIGKGFQG 176

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHNF     +HG S SHR  GS G    PGRV+K KKM GRMGG     + L++V +
Sbjct: 177 GIKRHNFKRGPMSHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTNRKTRKLKIVKI 235

Query: 183 DDKRGLIL 190
           D    +I+
Sbjct: 236 DKDLNVIM 243


>gi|262158450|ref|ZP_06029565.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae INDRE 91/1]
 gi|262029611|gb|EEY48260.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae INDRE 91/1]
          Length = 151

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 70/146 (47%), Positives = 94/146 (64%), Gaps = 2/146 (1%)

Query: 67  GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKR 126
           G F+   V   + L+EFR++  ++   VGS  +   F   + VDVTG + GKGF GA+KR
Sbjct: 8   GHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQGAVKR 66

Query: 127 HNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKR 186
            NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD +R
Sbjct: 67  WNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVDAER 126

Query: 187 GLILVKGCVPGAKKNSWILVRDSFKS 212
            L+L+KG VPGA   + ++V+ + K+
Sbjct: 127 NLLLIKGAVPGATGGN-VIVKPAVKA 151


>gi|299139130|ref|ZP_07032306.1| 50S ribosomal protein L3 [Acidobacterium sp. MP5ACTX8]
 gi|298598810|gb|EFI54972.1| 50S ribosomal protein L3 [Acidobacterium sp. MP5ACTX8]
          Length = 242

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 120/208 (57%), Gaps = 7/208 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVKNV 61
           +G++ +K+GMT +++  G   PVTVL +  C +   +T   +GY A Q+G  E  K   +
Sbjct: 4   TGILGKKIGMTQLFDDRGDIHPVTVLKVGPCVITQLKTQQTDGYSAAQIGLVEFVKASKI 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFR---VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           +K M G F+  NV P +++ E +   V++ ++    G   +   F   + VDV G + G+
Sbjct: 64  NKAMTGHFAKSNVPPVREIREVQIEFVEEGEEAPKAGDRVTVEIFNETRFVDVIGNSKGR 123

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF+G ++RH FGG   +HG     +  GS G    P RVF  ++M G MG N+VTV+NL 
Sbjct: 124 GFAGVIRRHGFGGGPKSHGHMF--QVQGSIGASSFPSRVFPGQRMPGHMGTNQVTVRNLR 181

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILV 206
           +  +D +  L+LV+G VPGA ++ ++LV
Sbjct: 182 IRGIDVEDNLLLVEGAVPGA-RDGYVLV 208


>gi|41053377|ref|NP_956301.1| 39S ribosomal protein L3, mitochondrial [Danio rerio]
 gi|33416933|gb|AAH55650.1| Mitochondrial ribosomal protein L3 [Danio rerio]
 gi|94734481|emb|CAK11310.1| mitochondrial ribosomal protein L3 [Danio rerio]
          Length = 319

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 118/214 (55%), Gaps = 12/214 (5%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRT-LDKNGYMAVQVGAGEAKVKN 60
           R G+VA KLGM  V++  G R  VT+L + +C VV H +  D NG+ +  V  G    KN
Sbjct: 70  RVGLVAIKLGMMPVWSKSGERHVVTMLQVKDCHVVKHLSKEDYNGHTSALVVGG----KN 125

Query: 61  VSKPMRG-----FFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMT 115
           VS   R       F +  + PK+KL  F V  D+ ++  G+    ++F  GQ VDVT  T
Sbjct: 126 VSPFHRPVGYLEIFQNAGIPPKQKLTTFCVT-DNAIIKPGTPLYAAHFRPGQYVDVTAKT 184

Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
           IGKGF G MKR  F G  A+HG + +HR  G+ G   DP +VFK  KM GRMG    T  
Sbjct: 185 IGKGFQGVMKRWGFKGQPASHGQTKTHRRPGALGPGGDPAKVFKGTKMPGRMGNVYNTNF 244

Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            L++  V+ K  ++ V G VPG  +N  + VRD+
Sbjct: 245 GLKIWRVNTKYNILYVNGSVPG-HRNCLVKVRDT 277


>gi|161723281|ref|NP_758399.2| 50S ribosomal protein L3 [Mycoplasma penetrans HF-2]
 gi|42559645|sp|Q8EUB3|RL3_MYCPE RecName: Full=50S ribosomal protein L3
          Length = 310

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 118/212 (55%), Gaps = 9/212 (4%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RK+GM   +  +GRRIPVT++  +   V+ ++T +KNGY+A +VG  + + K ++KP
Sbjct: 4   ILGRKIGMIQSFLEDGRRIPVTIIQAEPNVVLENKTQEKNGYVATKVGFQQIEEKKLNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
            +G+F  +     K   EFR   +     VG       F  G  VD   +T GKGF+GA+
Sbjct: 64  QKGYFKKIKTDAFKHTKEFR---NVSGYNVGDKILVDIFNSGDKVDAQAITKGKGFTGAI 120

Query: 125 KRHNFGGLRATHGVSISHRSHGST----GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           KR NF      HG    HR  GS     G  Q   RV K +KM+G  G   VT+ NL VV
Sbjct: 121 KRWNFKVGPLGHGAGYPHRYQGSISFGRGGSQGQ-RVPKGQKMSGHYGHELVTISNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           S++ ++ LILVKG VPG   NS +L++ + KS
Sbjct: 180 SIELEKNLILVKGSVPGP-VNSLVLLKTTVKS 210


>gi|94734480|emb|CAK11309.1| mitochondrial ribosomal protein L3 [Danio rerio]
          Length = 345

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 118/214 (55%), Gaps = 12/214 (5%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRT-LDKNGYMAVQVGAGEAKVKN 60
           R G+VA KLGM  V++  G R  VT+L + +C VV H +  D NG+ +  V  G    KN
Sbjct: 96  RVGLVAIKLGMMPVWSKSGERHVVTMLQVKDCHVVKHLSKEDYNGHTSALVVGG----KN 151

Query: 61  VSKPMRG-----FFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMT 115
           VS   R       F +  + PK+KL  F V  D+ ++  G+    ++F  GQ VDVT  T
Sbjct: 152 VSPFHRPVGYLEIFQNAGIPPKQKLTTFCVT-DNAIIKPGTPLYAAHFRPGQYVDVTAKT 210

Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
           IGKGF G MKR  F G  A+HG + +HR  G+ G   DP +VFK  KM GRMG    T  
Sbjct: 211 IGKGFQGVMKRWGFKGQPASHGQTKTHRRPGALGPGGDPAKVFKGTKMPGRMGNVYNTNF 270

Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            L++  V+ K  ++ V G VPG  +N  + VRD+
Sbjct: 271 GLKIWRVNTKYNILYVNGSVPG-HRNCLVKVRDT 303


>gi|169350795|ref|ZP_02867733.1| hypothetical protein CLOSPI_01569 [Clostridium spiroforme DSM 1552]
 gi|169292381|gb|EDS74514.1| hypothetical protein CLOSPI_01569 [Clostridium spiroforme DSM 1552]
          Length = 242

 Score =  128 bits (321), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 122/212 (57%), Gaps = 8/212 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+  +G  IPVTV+      V+  +T+  +GY A+QVG  + + K  +K
Sbjct: 3   GILGRKIGMTQVFTTDGLLIPVTVVEATENVVLQKKTVATDGYDAIQVGFEDKREKLANK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLL--PVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
              G     N +PK+ + EFR    D+++   VG   +   F  G++VDVTG + GKG+ 
Sbjct: 63  AELGIVKKANTAPKRFIKEFRF---DEMMSYEVGDKITVDSFVAGEVVDVTGTSKGKGYQ 119

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRH        HG S +HR  GS G    P R+   KK+ G+MG    TV+NLE+V+
Sbjct: 120 GVIKRHGQHIGPKGHG-SGAHRIVGSMGPIA-PNRIAPGKKLPGQMGHVTRTVQNLEIVA 177

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           VD +  L+L+KG VPG KK   ++V+   K+A
Sbjct: 178 VDVENNLLLIKGSVPGPKK-GLVIVKSGIKAA 208


>gi|197122296|ref|YP_002134247.1| 50S ribosomal protein L3 [Anaeromyxobacter sp. K]
 gi|220917078|ref|YP_002492382.1| ribosomal protein L3 [Anaeromyxobacter dehalogenans 2CP-1]
 gi|226725127|sp|B4UAM2|RL3_ANASK RecName: Full=50S ribosomal protein L3
 gi|254803648|sp|B8J817|RL3_ANAD2 RecName: Full=50S ribosomal protein L3
 gi|196172145|gb|ACG73118.1| ribosomal protein L3 [Anaeromyxobacter sp. K]
 gi|219954932|gb|ACL65316.1| ribosomal protein L3 [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 236

 Score =  128 bits (321), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 78/204 (38%), Positives = 114/204 (55%), Gaps = 7/204 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG---EAK 57
           M +G++A+K+GMT ++  EG  +PVTVL    C VV  +T +K+GY AV +G G   E  
Sbjct: 1   MSTGLLAKKVGMTQIFTPEGDCVPVTVLEAGPCTVVRRKTAEKDGYDAVVIGFGVVDEKH 60

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFS-PSYFTVGQLVDVTGM 114
              +SKP  G F        + + E RV+    L  L  G V +    F   Q +DV G+
Sbjct: 61  AHRLSKPEVGVFKKAGTPIFRHVKEIRVKDAKQLGDLKAGDVLTVDKVFKANQRIDVAGV 120

Query: 115 TIGKGFSGAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
           T G+GF+G MKR N  G  R +      HR  G+ G R+ PG+V+K K + G  G + VT
Sbjct: 121 TKGRGFTGVMKRWNMKGAARDSSTAHEHHRHVGAIGQRKTPGKVWKGKHLPGHYGVDNVT 180

Query: 174 VKNLEVVSVDDKRGLILVKGCVPG 197
           ++NL VV ++ ++ ++LV G VPG
Sbjct: 181 IQNLTVVGIEAEQNVLLVSGAVPG 204


>gi|26454475|dbj|BAC44803.1| ribosomal protein L3 [Mycoplasma penetrans HF-2]
          Length = 326

 Score =  128 bits (321), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 118/212 (55%), Gaps = 9/212 (4%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RK+GM   +  +GRRIPVT++  +   V+ ++T +KNGY+A +VG  + + K ++KP
Sbjct: 20  ILGRKIGMIQSFLEDGRRIPVTIIQAEPNVVLENKTQEKNGYVATKVGFQQIEEKKLNKP 79

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
            +G+F  +     K   EFR   +     VG       F  G  VD   +T GKGF+GA+
Sbjct: 80  QKGYFKKIKTDAFKHTKEFR---NVSGYNVGDKILVDIFNSGDKVDAQAITKGKGFTGAI 136

Query: 125 KRHNFGGLRATHGVSISHRSHGST----GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           KR NF      HG    HR  GS     G  Q   RV K +KM+G  G   VT+ NL VV
Sbjct: 137 KRWNFKVGPLGHGAGYPHRYQGSISFGRGGSQGQ-RVPKGQKMSGHYGHELVTISNLTVV 195

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           S++ ++ LILVKG VPG   NS +L++ + KS
Sbjct: 196 SIELEKNLILVKGSVPGP-VNSLVLLKTTVKS 226


>gi|145628334|ref|ZP_01784135.1| 50S ribosomal protein L3 [Haemophilus influenzae 22.1-21]
 gi|145640870|ref|ZP_01796452.1| 50S ribosomal protein L3 [Haemophilus influenzae R3021]
 gi|144980109|gb|EDJ89768.1| 50S ribosomal protein L3 [Haemophilus influenzae 22.1-21]
 gi|145274384|gb|EDK14248.1| 50S ribosomal protein L3 [Haemophilus influenzae 22.4-21]
          Length = 163

 Score =  128 bits (321), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 70/160 (43%), Positives = 95/160 (59%), Gaps = 2/160 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT ++N +G  +PVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+K
Sbjct: 3   GLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V   + L+EFR + ++    +G   +   F   + VDVTG + GKGF G 
Sbjct: 63  PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQGG 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
           +KR NF    ATHG S+SHR  GS G  Q PGRVFK KK 
Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKW 160


>gi|319938507|ref|ZP_08012901.1| 50S ribosomal protein L3 [Coprobacillus sp. 29_1]
 gi|319806423|gb|EFW03090.1| 50S ribosomal protein L3 [Coprobacillus sp. 29_1]
          Length = 244

 Score =  128 bits (321), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 81/220 (36%), Positives = 126/220 (57%), Gaps = 12/220 (5%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+  +G+ IPVTV+   +  V+  +T+  +GY A+QVG  + + K  +K
Sbjct: 3   GILGRKIGMTQVFTTDGKLIPVTVVEATSNVVLQKKTVATDGYDAIQVGFEDKREKLATK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLL--PVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
             +G  +    +PK+ + EFR    D+++   VG       F  G++VDVTG + GKG+ 
Sbjct: 63  AHKGHVAKAETAPKRFIKEFRY---DEMMSYEVGQEIKVDSFVAGEVVDVTGTSKGKGYQ 119

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRH        HG S +HR  GS G    P R+   KK+ G+MG    TV+NLE+V+
Sbjct: 120 GVIKRHGQSIGPKGHG-SGAHRIVGSMGPIA-PNRIAPGKKLPGQMGNVTRTVQNLEIVA 177

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
           VD +  ++L+ G +PG KK   ++     K+AV   GKV+
Sbjct: 178 VDVENNVLLISGSIPGPKKGLVVV-----KTAVKANGKVN 212


>gi|225710684|gb|ACO11188.1| Mitochondrial 39S ribosomal protein L3 [Caligus rogercresseyi]
          Length = 342

 Score =  127 bits (320), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/211 (39%), Positives = 118/211 (55%), Gaps = 6/211 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQV--GAGEAKV 58
           R G+VA KLGM  V+   G R  VT+L + +C V+ + + +K +G+ A  V  G   +  
Sbjct: 91  RVGLVAVKLGMAPVWTKTGERHVVTMLQVQDCHVLNYLSKEKYDGHTAALVVGGKNASPF 150

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
               + M   F    V PK+K+  F+V  D+ ++  G+    ++F  GQ VDVT  TIGK
Sbjct: 151 YKTDEEME-MFRLAGVPPKQKVTTFKVS-DNAIIKPGTPLYAAHFRPGQYVDVTAKTIGK 208

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G MKR+ F G  A+HG + +HR  G++G   DP +VFK KKM G MG    T   L+
Sbjct: 209 GFQGVMKRYGFKGQPASHGQTKTHRRPGASGPGGDPAKVFKGKKMPGMMGNVFDTAHGLK 268

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           V  V+ +  +I V G VPG  KN  + VRD+
Sbjct: 269 VWRVNTRYNVIYVHGSVPG-HKNCLLKVRDT 298


>gi|284042804|ref|YP_003393144.1| 50S ribosomal protein L3 [Conexibacter woesei DSM 14684]
 gi|283947025|gb|ADB49769.1| 50S ribosomal protein L3 [Conexibacter woesei DSM 14684]
          Length = 205

 Score =  127 bits (320), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 79/195 (40%), Positives = 107/195 (54%), Gaps = 3/195 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++A+KLGMT  +  +GR   VTVL    C V   RT +++GY AVQ+  G  + K ++K 
Sbjct: 4   ILAKKLGMTQRFLEDGRVERVTVLEAGPCPVTAIRTHERDGYEAVQLAFGACREKKLTKA 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
             G     + S  + L EFR +  +  L VG   +   F  GQ V V G + GKGF G +
Sbjct: 64  ELGHLKKADASAHRHLVEFRDEAGE--LQVGETVTVEAFEAGQTVKVAGTSKGKGFQGTI 121

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHNF     +HG S + R+ GS G    P RV K  +  G+MG  RVT K LE+V +  
Sbjct: 122 KRHNFRRGPKSHG-SHNVRAPGSIGASAWPARVMKGIRGPGQMGNKRVTQKGLEIVEIVS 180

Query: 185 KRGLILVKGCVPGAK 199
           K  L+LV+G VPG K
Sbjct: 181 KDNLMLVRGSVPGPK 195


>gi|323348471|gb|EGA82716.1| Mrpl9p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 164

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/136 (47%), Positives = 92/136 (67%), Gaps = 3/136 (2%)

Query: 82  EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSIS 141
           E +++K   L+P G++  PS+F  GQ VDV  ++ GKGF+G MKR+ F GLRA+HG SI 
Sbjct: 6   ELKMKKG--LIPPGTLLKPSFFKEGQYVDVRSVSKGKGFTGVMKRYGFKGLRASHGTSIM 63

Query: 142 HRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKN 201
           HR  GS G  QDPGRV   +KM G MG   VT++N++V+ VDD+  +I VKG V G  KN
Sbjct: 64  HRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVLKVDDENNVIWVKGSVAGP-KN 122

Query: 202 SWILVRDSFKSAVNCK 217
           S++ ++D+ K  ++ +
Sbjct: 123 SFVKIQDAIKKNLSIR 138


>gi|81429377|ref|YP_396378.1| 50S ribosomal protein L3 [Lactobacillus sakei subsp. sakei 23K]
 gi|109893434|sp|Q38UR2|RL3_LACSS RecName: Full=50S ribosomal protein L3
 gi|78611020|emb|CAI56072.1| 50S ribosomal protein L3 [Lactobacillus sakei subsp. sakei 23K]
          Length = 210

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 120/209 (57%), Gaps = 5/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+QVG  + +    +K
Sbjct: 5   GILGRKVGMTQVFTENGELIPVTVIAATPNVVLQVKTNETDGYEAIQVGFEDKREVLSNK 64

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G  +  N +PK+ + EFR     D   VG+      F  G +VDVTG+T G GF G 
Sbjct: 65  PAKGHVAKANTTPKRFIREFRDVALGD-YEVGTEIKVDTFAAGDVVDVTGVTKGHGFQGN 123

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +K+         HG S  HR  GS G   +  RVFK K + GRMG N+ TV+NL VVS D
Sbjct: 124 IKKDGQSRGPMGHG-SRYHRRPGSMGAVIN--RVFKGKLLPGRMGNNQRTVQNLVVVSTD 180

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            ++ +ILVKG VPGA KNS + ++ + K+
Sbjct: 181 VEKNVILVKGNVPGA-KNSMVTIKTAVKA 208


>gi|116493163|ref|YP_804898.1| 50S ribosomal protein L3P [Pediococcus pentosaceus ATCC 25745]
 gi|122265373|sp|Q03EB6|RL3_PEDPA RecName: Full=50S ribosomal protein L3
 gi|116103313|gb|ABJ68456.1| LSU ribosomal protein L3P [Pediococcus pentosaceus ATCC 25745]
          Length = 210

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/210 (37%), Positives = 122/210 (58%), Gaps = 5/210 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V+   G  IPVTV+      V+  +T++ +GY +VQ+G  + +    +K
Sbjct: 5   GILGKKVGMTQVFTEAGELIPVTVIDTTPNVVLQLKTVENDGYSSVQLGFDDKRQVLSNK 64

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G  +  N +PK+ + E R  +  D+  VG   +   F  G++VDVTG T G GF G 
Sbjct: 65  PEQGHVAKANTNPKRFIHEIRNVELGDV-KVGDTIAADIFEAGEIVDVTGTTKGHGFQGV 123

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +K+         HG S  HR  GS G   +  RVF  KK+ GRMG   VT+++LE+V  D
Sbjct: 124 IKKDGQRRGPMAHG-SRYHRRPGSLGAVIN--RVFPGKKLPGRMGNKTVTIQHLEIVKAD 180

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +  ++LVKG VPGAKK S+++V+ + K+ 
Sbjct: 181 TENNVLLVKGNVPGAKK-SYLVVKSTVKNT 209


>gi|86158411|ref|YP_465196.1| 50S ribosomal protein L3 [Anaeromyxobacter dehalogenans 2CP-C]
 gi|109893409|sp|Q2IJD0|RL3_ANADE RecName: Full=50S ribosomal protein L3
 gi|85774922|gb|ABC81759.1| LSU ribosomal protein L3P [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 236

 Score =  127 bits (318), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/205 (38%), Positives = 115/205 (56%), Gaps = 9/205 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG---EAK 57
           M +G++A+K+GMT ++  EG  +PVTVL    C VV  +T +K+GY AV +G G   E  
Sbjct: 1   MSTGLLAKKVGMTQIFTPEGDCVPVTVLEAGPCTVVRRKTAEKDGYDAVVIGFGVVDEKH 60

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLL---PVGSVFS-PSYFTVGQLVDVTG 113
              +SKP  G F        + + E RV KD  LL     G V +    F   Q +DV G
Sbjct: 61  AHRLSKPEVGVFKKAGTPIFRHVKEIRV-KDAKLLGDLKAGDVLTVDKVFKANQRIDVAG 119

Query: 114 MTIGKGFSGAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           +T G+GF+G MKR N  G  R +      HR  G+ G R+ PG+V+K K + G  G + +
Sbjct: 120 VTKGRGFTGVMKRWNMKGAARDSSTAHEHHRHVGAIGQRKTPGKVWKGKHLPGHYGVDNI 179

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPG 197
           T++NL VV ++ ++ ++LV G VPG
Sbjct: 180 TIQNLTVVGIEPEQNVLLVSGAVPG 204


>gi|283780374|ref|YP_003371129.1| 50S ribosomal protein L3 [Pirellula staleyi DSM 6068]
 gi|283438827|gb|ADB17269.1| ribosomal protein L3 [Pirellula staleyi DSM 6068]
          Length = 232

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/233 (36%), Positives = 130/233 (55%), Gaps = 25/233 (10%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT +Y+  G  IPVTV+    C+V+  +TL+++GY AVQ+G  +   + 
Sbjct: 1   MTKGILGRKVGMTQIYDEAGNAIPVTVVEAGPCRVLQLKTLERDGYEAVQLGFLDKPRRL 60

Query: 61  VSKPMRGFFSSVN-------------------VSPKKKLFEFRVQKDDDLLPVGSVFSPS 101
            S+  RG  +++                      PK+ + EFR   D     VG   +  
Sbjct: 61  ASRSERGHVAALESKRAKRRAAAGVVAVAKAACEPKRFVREFRGSADG--FTVGQDVTVE 118

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC---RQDPGRVF 158
                + VDVTG++ G+GFSGAMKRHNF G RATHGV   HR  G TG     +  GR+ 
Sbjct: 119 ALEGVKAVDVTGISKGRGFSGAMKRHNFAGQRATHGVKKVHRHMGGTGALASNRGGGRMK 178

Query: 159 KNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           K KKM G+ G  R+T +N+++V VD +  L+L+ G VPG  + + +++R++ K
Sbjct: 179 KGKKMPGQYGSARITTRNIKLVRVDKENNLLLINGPVPGP-QGAMVIIRETNK 230


>gi|225716532|gb|ACO14112.1| Mitochondrial 39S ribosomal protein L3 [Esox lucius]
          Length = 341

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/212 (39%), Positives = 115/212 (54%), Gaps = 8/212 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGY----MAVQVGAGEAK 57
           R G+VA KLGM  V+   G R  VT+L + +C V+  + L K  Y     A+ VG   A 
Sbjct: 91  RVGLVAVKLGMAPVWTKMGDRQVVTLLQVQDCHVL--KYLSKEEYDGHTAALLVGGKNAS 148

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
               S+     F    V PK+K+  F+V  D+ ++  G+    ++F  GQ VDVT  TIG
Sbjct: 149 SFYKSQEEMEMFRFAGVPPKQKISTFKVS-DNAIIKPGTPLYAAHFRPGQYVDVTAKTIG 207

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
            GF G MKR+ F G  ATHG + +HR  G++G   DP +VFK +KM GRMG    T   L
Sbjct: 208 MGFQGVMKRYGFKGQPATHGQTKTHRRPGASGPGGDPAKVFKGRKMPGRMGNVFDTAHGL 267

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +V  V+ +  +I V G VPG  +N  + V DS
Sbjct: 268 KVWRVNTRYNIIYVHGTVPG-HRNCILKVADS 298


>gi|241895187|ref|ZP_04782483.1| 50S ribosomal protein L3 [Weissella paramesenteroides ATCC 33313]
 gi|241871493|gb|EER75244.1| 50S ribosomal protein L3 [Weissella paramesenteroides ATCC 33313]
          Length = 208

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/209 (39%), Positives = 120/209 (57%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V+   G  IPVTV+      V+  +TL+ +GY A+Q+G  + +    +K
Sbjct: 5   GILGRKVGMTQVFTETGELIPVTVIEATPNVVLQVKTLENDGYSALQLGYQDKRQVLSNK 64

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G  +  N +PK+ + E R  + +    VG       F  G+ VDVTG+T G G+ G 
Sbjct: 65  PEQGHVAKANTTPKRYIREIRDAEGE--FNVGDEVKVDIFAAGEAVDVTGITKGHGYQGN 122

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +K+         HG S  HR  GS G   +  RVFK KK+ GRMG ++ TV+NL+VV VD
Sbjct: 123 IKKDGQARGPMAHG-SRYHRRPGSLGAIIN--RVFKGKKLPGRMGNHKRTVQNLQVVRVD 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  +ILVKG VPGA K S + V+ S K+
Sbjct: 180 VENNVILVKGNVPGANK-SLVTVKYSKKA 207


>gi|312870514|ref|ZP_07730633.1| 50S ribosomal protein L3 [Lactobacillus oris PB013-T2-3]
 gi|311093976|gb|EFQ52301.1| 50S ribosomal protein L3 [Lactobacillus oris PB013-T2-3]
          Length = 220

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 122/212 (57%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+   G  +PVTV+ +    V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MAKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQIKTVENDGYNAVQLGFDDKREIL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + E R  +  D + VG       F  G+ VDVTG+T G G+
Sbjct: 61  SNKPEQGHAAKANTTPKRFIGEIRDAELGDDIKVGDEVKADVFAEGETVDVTGVTKGHGY 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G + + N       HG S  HR  GS G   +  RVFK  K+ GRMG   VT+++L+VV
Sbjct: 121 QGNIHKDNQSRGPMAHG-SRYHRRPGSLGAIIN--RVFKGMKLPGRMGNKTVTMQHLQVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD    ++L+KG VPGA K S++ +++S K+
Sbjct: 178 KVDLDNNVLLIKGNVPGANK-SYVTIKNSVKA 208


>gi|94266253|ref|ZP_01289960.1| Ribosomal protein L3 [delta proteobacterium MLMS-1]
 gi|93453179|gb|EAT03643.1| Ribosomal protein L3 [delta proteobacterium MLMS-1]
          Length = 209

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 112/198 (56%), Gaps = 3/198 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V+   G  +PVTV+    C V+  +T+ K GY A+QVG G      ++K
Sbjct: 6   GLLGKKVGMTRVFTETGAAVPVTVIQAGPCVVLQKKTVAKEGYSAIQVGFGPRSEARLNK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKGFSG 122
              G   +      + + EFRV  D +   +G   S      +G LVD+ G + G+GF G
Sbjct: 66  AEAGHVKAAGKGGFEFVREFRVS-DPEAYQLGQEISVGDLLNIGDLVDIRGKSKGRGFQG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR+ F G RATHG S+ HR+ G+ GC   P RV K KKM G+MG   +T KN  +V +
Sbjct: 125 VVKRYGFKGGRATHG-SMFHRAPGAIGCSAWPSRVIKGKKMPGQMGDKYITKKNCTIVDI 183

Query: 183 DDKRGLILVKGCVPGAKK 200
             +  +I++KG VPG+ +
Sbjct: 184 RPESNVIVLKGGVPGSSQ 201


>gi|184155991|ref|YP_001844331.1| 50S ribosomal protein L3 [Lactobacillus fermentum IFO 3956]
 gi|227515487|ref|ZP_03945536.1| ribosomal protein L3 [Lactobacillus fermentum ATCC 14931]
 gi|260662752|ref|ZP_05863646.1| 50S ribosomal protein L3 [Lactobacillus fermentum 28-3-CHN]
 gi|212288403|sp|B2GDW9|RL3_LACF3 RecName: Full=50S ribosomal protein L3
 gi|183227335|dbj|BAG27851.1| 50S ribosomal protein L3 [Lactobacillus fermentum IFO 3956]
 gi|227086100|gb|EEI21412.1| ribosomal protein L3 [Lactobacillus fermentum ATCC 14931]
 gi|260552833|gb|EEX25832.1| 50S ribosomal protein L3 [Lactobacillus fermentum 28-3-CHN]
          Length = 220

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/214 (37%), Positives = 123/214 (57%), Gaps = 8/214 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+   G  +PVTV+ +    V+  +TL+ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQVKTLENDGYSAVQLGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + E R  +  D + VG   +   F  G+ VDVTG T G G+
Sbjct: 61  SNKPEQGHAAKANTTPKRFIGEIRDAELGDDIKVGDKVAADIFAEGETVDVTGTTKGHGY 120

Query: 121 SGAMKRHNFGGLRA--THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
            G +  H  G  R    HG S  HR  GS G   +   VFK KK+ GRMG N  TV++L 
Sbjct: 121 QGNI--HKDGQRRGPMAHG-SRYHRRPGSLGAIIN--HVFKGKKLPGRMGNNTRTVQHLR 175

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +V VD +  ++L+KG VPGA K S++ +++S K+
Sbjct: 176 IVKVDTENNVLLIKGNVPGANK-SFVTIKNSVKA 208


>gi|259502531|ref|ZP_05745433.1| 50S ribosomal protein L3 [Lactobacillus antri DSM 16041]
 gi|259169483|gb|EEW53978.1| 50S ribosomal protein L3 [Lactobacillus antri DSM 16041]
          Length = 220

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 122/212 (57%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+   G  +PVTV+ +    V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MAKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQVKTVENDGYNAVQLGFDDKREIL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + E R  +  D + VG       F  G+ VDVTG+T G G+
Sbjct: 61  SNKPEQGHAAKANTTPKRFIGEIRDAELGDDIKVGDEVKADVFAEGETVDVTGVTKGHGY 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G + + N       HG S  HR  GS G   +  RVFK  K+ GRMG   VT+++L+VV
Sbjct: 121 QGNIHKDNQSRGPMAHG-SRYHRRPGSLGAIIN--RVFKGMKLPGRMGNKTVTMQHLQVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD    ++L+KG VPGA K S++ +++S K+
Sbjct: 178 KVDLDNNVLLIKGNVPGANK-SYVTIKNSVKA 208


>gi|206900842|ref|YP_002250701.1| ribosomal protein L3 [Dictyoglomus thermophilum H-6-12]
 gi|206739945|gb|ACI19003.1| ribosomal protein L3 [Dictyoglomus thermophilum H-6-12]
          Length = 215

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 116/208 (55%), Gaps = 4/208 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RK+GMT ++   G  IPVTV+    C V+  +T +K+GY A+Q+G    K   ++KP
Sbjct: 9   ILGRKIGMTQIFTDSGELIPVTVIKGGPCLVLNVKTKEKDGYDAIQLGFENCKESKLNKP 68

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
             G F  + + P + + E RV+   D    G       F  G+LVD+TG + G GF+G +
Sbjct: 69  QLGIFKKLGLPPFRIIKEVRVKNPLDYTR-GQEIRVDIFQEGELVDITGKSKGHGFTGHI 127

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR  F   R +HG S  HR   S G       V K +KMAGR G   +TV+NL+VV VD 
Sbjct: 128 KRWGFRRGRMSHG-SKFHRRRASIGA-GGVQHVMKGQKMAGRWGNETITVQNLKVVKVDK 185

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
           ++ +ILVKG VPG   N  +++R + K 
Sbjct: 186 EKDIILVKGAVPGPTGN-LLIIRKAVKE 212


>gi|251799642|ref|YP_003014373.1| 50S ribosomal protein L3 [Paenibacillus sp. JDR-2]
 gi|247547268|gb|ACT04287.1| ribosomal protein L3 [Paenibacillus sp. JDR-2]
          Length = 207

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/209 (38%), Positives = 113/209 (54%), Gaps = 4/209 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT V+  EG  +PVTV+    C V+  +  + +GY AVQ G  + K     K
Sbjct: 3   GILGKKLGMTQVFTAEGNVVPVTVIEAGPCVVLQKKDQENDGYEAVQFGFSDKKEARAIK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G     N +PK+ + E R     +   VG       F  G+ VDVTG++ GKGF+G 
Sbjct: 63  PEIGHAKKANTAPKRYVREIRGINLGE-YEVGQEVKADLFAEGEFVDVTGISKGKGFAGV 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR         HG S  HR  GS G  Q   RV K K + G MG   VT++ LE++ VD
Sbjct: 122 IKRWGQSTGPMAHG-SRYHRGPGSMGSIQ-ANRVPKGKHLPGHMGHETVTIQKLEIIRVD 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +R +ILVKG +PG  KN ++ V+ + K+
Sbjct: 180 AERNVILVKGSIPGP-KNGFVKVKQTVKN 207


>gi|225873078|ref|YP_002754537.1| ribosomal protein L3 [Acidobacterium capsulatum ATCC 51196]
 gi|225791691|gb|ACO31781.1| ribosomal protein L3 [Acidobacterium capsulatum ATCC 51196]
          Length = 246

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 119/213 (55%), Gaps = 12/213 (5%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVKNV 61
           +G++ +K+GMT V++ +G   P+TVL    C +   +T  K+GY A Q+G  E  K   V
Sbjct: 4   TGILGKKIGMTQVFDEKGEVHPITVLQAGPCVITQLKTAAKDGYDAAQIGLVEFVKDSKV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQ--------KDDDLLPVGSVFSPSYFTVGQLVDVTG 113
           +KPM+G F+  +V+P + + E  V+        + +  +  G       F   + VD+ G
Sbjct: 64  TKPMKGHFAKSDVAPVRMIKEVDVETAAPSAEGESNGAVKAGDRVLVDIFADEKYVDIIG 123

Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
            + G+GF+G ++RH FGG   +HG     +  GS G    P RVF  ++M G MG +RVT
Sbjct: 124 TSKGRGFAGVVRRHGFGGGPKSHGHMF--QVQGSIGASSFPSRVFPGQRMPGHMGTDRVT 181

Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206
           V+NL +  +D    LI+V+G VPG  ++ ++L+
Sbjct: 182 VRNLRIRGIDLDENLIMVEGAVPGP-RDGYVLI 213


>gi|156089107|ref|XP_001611960.1| 50S ribosomal protein L3 [Babesia bovis T2Bo]
 gi|154799214|gb|EDO08392.1| 50S ribosomal protein L3, putative [Babesia bovis]
          Length = 350

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/198 (40%), Positives = 109/198 (55%), Gaps = 5/198 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R GV+A KLG   +++  G R  VTV H+D C V+  RT+ ++GY AVQ+G G   +   
Sbjct: 91  RCGVLAYKLGCMSLWDDWGERHMVTVCHVDRCVVLEKRTIAEHGYEAVQLGLGYRNINRQ 150

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SK   G F    V  K  + EF+    D LLPVG   S  +FT GQ V V+G +  KGF 
Sbjct: 151 SKQNIGRFIKAGVGSKDHIAEFKC-SSDCLLPVGHYMSVRHFTPGQWVFVSGWSQPKGFQ 209

Query: 122 GAMKRHNFGGLRATHGVSI-SHRSHGSTGCRQDPGRVFKNKKMAGRMGGN-RVTVKNLEV 179
           GAM+R +FGG  A+HG    +H + GS    +    V++  KM G  G + RVT  N  V
Sbjct: 210 GAMRRWHFGGQNASHGTECKAHSAPGSIAQGKSAHIVWRGTKMGGHKGPDPRVT--NCRV 267

Query: 180 VSVDDKRGLILVKGCVPG 197
             ++  R LI +KG VPG
Sbjct: 268 FRIEAHRNLIFLKGTVPG 285


>gi|227431341|ref|ZP_03913394.1| ribosomal protein L3 [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227352934|gb|EEJ43107.1| ribosomal protein L3 [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 228

 Score =  125 bits (314), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/217 (39%), Positives = 120/217 (55%), Gaps = 8/217 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  I VT +      V+  +  + +GY A+Q+G  + +   
Sbjct: 1   MTKGILGRKVGMTQVFTESGELIAVTAVEATPNVVLQVKNAETDGYGAIQLGYQDKRTVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  S  N +PK+ + E R   D+    VG       F  G+ VDVTG+T G GF
Sbjct: 61  SNKPEQGHASKANTAPKRYVREIRNAGDE--FNVGDEIKVDTFQAGEYVDVTGITKGHGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR        THG S  HR  GS G   +  RVFK K + GRMG N+ T++N+ VV
Sbjct: 119 QGAIKRLGQSRGPMTHG-SRYHRRPGSMGAIIN--RVFKGKLLPGRMGNNKRTMQNIAVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
            VD ++ L+L+KG VPGA K S + V+ + K  VN K
Sbjct: 176 HVDVEKNLLLLKGNVPGANK-SLLTVKSTVK--VNAK 209


>gi|148927108|ref|ZP_01810738.1| ribosomal protein L3 [candidate division TM7 genomosp. GTL1]
 gi|147887427|gb|EDK72871.1| ribosomal protein L3 [candidate division TM7 genomosp. GTL1]
          Length = 180

 Score =  125 bits (314), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/181 (43%), Positives = 106/181 (58%), Gaps = 5/181 (2%)

Query: 25  VTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFR 84
           +T++    C V   +T DK+GY AVQ+G GE K  N+S  + G   +  V+PK  + E R
Sbjct: 1   MTLVQAGPCAVTQVKTADKDGYNAVQIGYGEGK--NLSNAVAGHVKAAKVTPKV-IREIR 57

Query: 85  VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRS 144
           V + D++  VG       F VG  VDVTG + GKGF+G +KRHNF   + THG +   R 
Sbjct: 58  VNELDEI-KVGDQLGVDLFIVGDNVDVTGTSKGKGFAGTVKRHNFNTSKKTHGGNGYVRK 116

Query: 145 HGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWI 204
            GS G    P ++FK K+MAGRMG   VTVKNL V  +D +  LI +KG VPG +K   +
Sbjct: 117 VGSIGSMY-PQKIFKGKRMAGRMGHETVTVKNLSVAYIDAESNLIGLKGAVPGPRKGIVV 175

Query: 205 L 205
           +
Sbjct: 176 I 176


>gi|47459070|ref|YP_015932.1| 50S ribosomal protein L3 [Mycoplasma mobile 163K]
 gi|81828477|sp|Q6KI55|RL3_MYCMO RecName: Full=50S ribosomal protein L3
 gi|47458399|gb|AAT27721.1| 50S ribosomal protein l3 [Mycoplasma mobile 163K]
          Length = 297

 Score =  125 bits (314), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 124/212 (58%), Gaps = 8/212 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVKNVS 62
           G++ +K+GMT +Y  +G ++PVTV+ +    VV H+  + K+GY+A+Q+GA + K +   
Sbjct: 3   GILGQKIGMTQIYTAQGNKVPVTVIEV-KPNVVTHKFENTKDGYVALQLGAFDQKERKFK 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F   N +PK+ + E R   + D   +G +     F  G+LVDVTG++ GKGF+G
Sbjct: 62  KPEIGHFKKSNTTPKRFVKEIR---NMDGYNLGDLVKADIFKSGELVDVTGISKGKGFAG 118

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180
            +KRHN      +HG     +    TG   D    +V K   M G +G  + T++NLEVV
Sbjct: 119 TIKRHNQKIGPKSHGGGGGSKPVRQTGSIGDIAGNKVLKGMTMPGHLGNVQRTIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD K  ++LVKG VPG  KN +++++ + K+
Sbjct: 179 KVDIKNNILLVKGSVPGP-KNCFLIIKSAIKN 209


>gi|148544696|ref|YP_001272066.1| 50S ribosomal protein L3 [Lactobacillus reuteri DSM 20016]
 gi|184154049|ref|YP_001842390.1| 50S ribosomal protein L3 [Lactobacillus reuteri JCM 1112]
 gi|194466953|ref|ZP_03072940.1| ribosomal protein L3 [Lactobacillus reuteri 100-23]
 gi|227363819|ref|ZP_03847926.1| ribosomal protein L3 [Lactobacillus reuteri MM2-3]
 gi|227543623|ref|ZP_03973672.1| ribosomal protein L3 [Lactobacillus reuteri CF48-3A]
 gi|300909348|ref|ZP_07126809.1| 50S ribosomal protein L3 [Lactobacillus reuteri SD2112]
 gi|325683030|ref|ZP_08162546.1| 50S ribosomal protein L3 [Lactobacillus reuteri MM4-1A]
 gi|212288404|sp|A5VLK5|RL3_LACRD RecName: Full=50S ribosomal protein L3
 gi|226730527|sp|B2G8X8|RL3_LACRJ RecName: Full=50S ribosomal protein L3
 gi|148531730|gb|ABQ83729.1| LSU ribosomal protein L3P [Lactobacillus reuteri DSM 20016]
 gi|183225393|dbj|BAG25910.1| 50S ribosomal protein L3 [Lactobacillus reuteri JCM 1112]
 gi|194453989|gb|EDX42886.1| ribosomal protein L3 [Lactobacillus reuteri 100-23]
 gi|227071176|gb|EEI09492.1| ribosomal protein L3 [Lactobacillus reuteri MM2-3]
 gi|227186463|gb|EEI66534.1| ribosomal protein L3 [Lactobacillus reuteri CF48-3A]
 gi|300893213|gb|EFK86572.1| 50S ribosomal protein L3 [Lactobacillus reuteri SD2112]
 gi|324977380|gb|EGC14331.1| 50S ribosomal protein L3 [Lactobacillus reuteri MM4-1A]
          Length = 219

 Score =  125 bits (313), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 122/212 (57%), Gaps = 5/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+   G  +PVTV+ +    V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQIKTVENDGYSAVQLGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + E R  +  D + VG       F  G+ VDVTG T G G+
Sbjct: 61  SNKPEQGHAAKANTTPKRFIGEIRDAELGD-IKVGDEVKADVFAEGETVDVTGTTKGHGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G + + N       HG S  HR  GS G   +  RVFK  K+ GRMGG  VT+++L+VV
Sbjct: 120 QGNIHKDNQSRGPMAHG-SRYHRRPGSLGAIIN--RVFKGMKLPGRMGGKTVTMQHLQVV 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD    ++L+KG VPGA K S++ +++S K+
Sbjct: 177 KVDLDNNVLLIKGNVPGANK-SYVTIKNSVKA 207


>gi|116617329|ref|YP_817700.1| 50S ribosomal protein L3P [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122272470|sp|Q03ZP5|RL3_LEUMM RecName: Full=50S ribosomal protein L3
 gi|116096176|gb|ABJ61327.1| LSU ribosomal protein L3P [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 228

 Score =  125 bits (313), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 121/219 (55%), Gaps = 12/219 (5%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  I VT +      V+  +  + +GY A+Q+G  + +   
Sbjct: 1   MTKGILGRKVGMTQVFTESGELIAVTAVEATPNVVLQVKNAETDGYSAIQLGYQDKRTVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  S  N +PK+ + E R   D+    VG       F  G+ VDVTG+T G GF
Sbjct: 61  SNKPEQGHASKANTAPKRYVREIRNAGDE--FNVGDEIKVDTFQAGEYVDVTGITKGHGF 118

Query: 121 SGAMKRHNFGGLRA--THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
            GA+KR   G  R   THG S  HR  GS G   +  RVFK K + GRMG N+ T++N+ 
Sbjct: 119 QGAIKR--LGQSRGPMTHG-SRYHRRPGSMGAIIN--RVFKGKLLPGRMGNNKRTMQNIA 173

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           +V VD +  L+L+KG VPGA K S + V+ + K  VN K
Sbjct: 174 IVHVDVENNLLLLKGNVPGANK-SLLTVKSTVK--VNAK 209


>gi|42524375|ref|NP_969755.1| 50S ribosomal protein L3 [Bdellovibrio bacteriovorus HD100]
 gi|81829166|sp|Q6MJ15|RL3_BDEBA RecName: Full=50S ribosomal protein L3
 gi|39576584|emb|CAE80748.1| 50S ribosomal protein L3 [Bdellovibrio bacteriovorus HD100]
          Length = 220

 Score =  124 bits (312), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 77/206 (37%), Positives = 108/206 (52%), Gaps = 1/206 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           +G+ A K GM  +YN  G  +PVTVL  +   V   +T + +GY A+QV     K KN +
Sbjct: 16  NGLFAFKEGMATIYNENGEAVPVTVLRYEPWFVSQIKTNEADGYEAIQVACHPKKAKNSN 75

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K  +G           +  +   Q   +   VG+  S      G  V +T  + GKGF+G
Sbjct: 76  KAEKGHLEKAGFENGAQFVKELRQAAPEGTVVGAQISIDSLAKGDFVKITSKSKGKGFAG 135

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           ++KR  F G  A+HG S  HR  GS+G R  PGRV   KK  G +G   VTVKN+EVV +
Sbjct: 136 SVKRWGFAGGPASHG-SKFHRRPGSSGNRTWPGRVMPGKKFPGHLGAETVTVKNVEVVQI 194

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRD 208
             +  +++VKG VPGA+     LVR+
Sbjct: 195 IAEENVLMVKGPVPGARNTLVKLVRE 220


>gi|313891553|ref|ZP_07825163.1| 50S ribosomal protein L3 [Dialister microaerophilus UPII 345-E]
 gi|329121828|ref|ZP_08250443.1| 50S ribosomal protein L3 [Dialister micraerophilus DSM 19965]
 gi|313120012|gb|EFR43194.1| 50S ribosomal protein L3 [Dialister microaerophilus UPII 345-E]
 gi|327467766|gb|EGF13258.1| 50S ribosomal protein L3 [Dialister micraerophilus DSM 19965]
          Length = 213

 Score =  124 bits (312), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 80/193 (41%), Positives = 115/193 (59%), Gaps = 4/193 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ RKLGM+ V+   G  +PV+V+ +    VV  +T++ +GY AVQ+G G  K K+
Sbjct: 1   MSKAILGRKLGMSQVFAENGDLVPVSVIEVLPNTVVAVKTVETDGYYAVQLGYGAIKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP++G F    V+P K L E R   +     VG   +   F  G ++DV G++ GKGF
Sbjct: 61  LTKPLKGQFEKAGVAPTKFLREHRFS-EKPAYEVGQTLAADIFAEGDVIDVVGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD--PGRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KRHN      +HG S +HR   S G R     G+VFK KKM G MG +RVTV+NL+
Sbjct: 120 AGTIKRHNHQRGPESHG-SKNHRQTASLGARMSGGGGKVFKGKKMPGHMGCDRVTVQNLK 178

Query: 179 VVSVDDKRGLILV 191
           VV +D  R L+LV
Sbjct: 179 VVRIDTARNLMLV 191


>gi|283768462|ref|ZP_06341374.1| 50S ribosomal protein L3 [Bulleidia extructa W1219]
 gi|283104854|gb|EFC06226.1| 50S ribosomal protein L3 [Bulleidia extructa W1219]
          Length = 252

 Score =  124 bits (311), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 79/211 (37%), Positives = 119/211 (56%), Gaps = 8/211 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT V+ I+G  IPVTV+ +    V+  +T + +GY AVQ+G  + K +  +K
Sbjct: 3   GILGRKLGMTQVFTIDGTLIPVTVIDVKPNVVLQKKTKETDGYEAVQLGYEDVKEQRSNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLL--PVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           P  G     N +PKK + E R    D+++   VG+      F  G +VDV G + GKG+S
Sbjct: 63  PAIGHAKKANTAPKKYIKEIRA---DEMMNFEVGAEVKADLFKAGDVVDVQGTSKGKGYS 119

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCR-QDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           G + R+N      +HG S  HR  GS     ++ G V K   M G+ GG   T +NL+V+
Sbjct: 120 GTIVRNNAARGPMSHG-SGHHRHIGSLATNGRNNGVVNKGTAMPGQEGGYTTTNQNLQVI 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD + G ILVKG +PG +K   ++++ + K
Sbjct: 179 KVDAEEGYILVKGNIPGPRK-GLVVIKTTVK 208


>gi|330722458|gb|EGH00293.1| LSU ribosomal protein L3p (L3e) [gamma proteobacterium IMCC2047]
          Length = 141

 Score =  124 bits (311), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 72/134 (53%), Positives = 88/134 (65%), Gaps = 2/134 (1%)

Query: 80  LFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGV 138
           L E RV++ D + + VG   +   F  GQ VDVTG + GKGF+G +KR NF    ATHG 
Sbjct: 7   LNESRVEEADLEGVNVGDELTVERFEAGQKVDVTGQSKGKGFAGGVKRWNFKMQDATHGN 66

Query: 139 SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGA 198
           SISHR+ GS G  Q PGRVFK KKMAG MG  +VT + LE+V VD +R LILVKG VPGA
Sbjct: 67  SISHRAPGSIGQCQTPGRVFKGKKMAGHMGAAQVTTQGLEIVRVDAERNLILVKGAVPGA 126

Query: 199 KKNSWILVRDSFKS 212
                +LVR + K+
Sbjct: 127 PGGD-VLVRPTVKA 139


>gi|269866677|ref|XP_002652354.1| LSU ribosomal protein L3P [Enterocytozoon bieneusi H348]
 gi|220062674|gb|EED41701.1| LSU ribosomal protein L3P [Enterocytozoon bieneusi H348]
          Length = 116

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/109 (55%), Positives = 82/109 (75%), Gaps = 1/109 (0%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  GQ VDV+G++ GKGF+GA+KRHNF   RA+HG S+SHR+ GS GCRQ PGRVFK KK
Sbjct: 8   FAEGQRVDVSGVSKGKGFAGAIKRHNFRSNRASHGNSLSHRAPGSIGCRQTPGRVFKGKK 67

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           MAG +G  +VT  NLE+V +D  R L+++KG VPGA ++  +++R + +
Sbjct: 68  MAGHLGAEQVTTLNLELVRIDANRRLLMIKGAVPGA-RDGDVMIRPAVR 115


>gi|194246733|ref|YP_002004372.1| 50S ribosomal protein L3 [Candidatus Phytoplasma mali]
 gi|254803686|sp|B3QZZ1|RL3_PHYMT RecName: Full=50S ribosomal protein L3
 gi|193807090|emb|CAP18528.1| 50S ribosomal protein L3 [Candidatus Phytoplasma mali]
          Length = 219

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 127/218 (58%), Gaps = 9/218 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V++ +G  IP+T++ + +  ++   +++KNGY++ Q+G    + K 
Sbjct: 1   MAKGILGRKIGMTQVFDEKGSLIPITIVDVSDNVILQQNSVEKNGYLSTQLGFSSKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFR----VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116
            +KP  G F +   SPK+ + E R    ++ +   L +G+    + F  G +VDV G++ 
Sbjct: 61  STKPALGHFKNAKTSPKRFIKEIRFLPGIKNELSELDLGTSLKTNLFQPGDIVDVIGISK 120

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           GKGFSG++KRHN      +HG     R H   G         K KK+ G+MG   VT++N
Sbjct: 121 GKGFSGSIKRHNQSEGPKSHG----SRYHRRPGSMGPIKGKIKGKKLPGQMGHQTVTLQN 176

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           L++ S+D ++ L L+KG +PG +K  +++++ + K+ +
Sbjct: 177 LKINSIDHEQELFLIKGSIPGPRK-GFVMIKTAIKTVI 213


>gi|168038916|ref|XP_001771945.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676727|gb|EDQ63206.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 214

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/188 (38%), Positives = 101/188 (53%), Gaps = 2/188 (1%)

Query: 15  VYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVKNVSKPMRGFFSSVN 73
           V+  +G+ +P TV+      +V     D  +GY AVQVG    + + ++KP  G  + V 
Sbjct: 11  VFTEDGKAVPCTVVGFHEGNIVTQVKSDATDGYTAVQVGYRRVRDRKLTKPQLGHLNKVG 70

Query: 74  VSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLR 133
             P + L EFRV   +   P   +     F  G L+DV G +IGKGF G +KR+NF   +
Sbjct: 71  AIPMRHLQEFRVVSAEGYEPNQVLQLEEIFKEGDLIDVVGNSIGKGFQGGIKRYNFARGQ 130

Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKG 193
            THG S S R  GS G    PGRV+  KKM G+MG  R  ++ LE+V VD +   +L+KG
Sbjct: 131 MTHG-SKSKRQLGSIGAGTTPGRVYPGKKMPGQMGSGRAKIRKLEIVKVDPELRALLIKG 189

Query: 194 CVPGAKKN 201
            VPG   N
Sbjct: 190 SVPGKPGN 197


>gi|152940799|gb|ABS44864.1| putative 50S ribosomal protein L3 [Oryza sativa Japonica Group]
          Length = 188

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/163 (41%), Positives = 94/163 (57%), Gaps = 1/163 (0%)

Query: 39  RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVF 98
           +T   +GY AVQVG    + + +++P  G        P + L EFR+Q  D   P   + 
Sbjct: 10  KTAATDGYDAVQVGYHGVREEKLTRPELGHLGKAGAPPLRHLQEFRLQSVDGYDPGQPLD 69

Query: 99  SPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVF 158
               F  G LVD++G +IGKGF G +KRHNF     THG S SHR+ GS G    PGRV+
Sbjct: 70  FADMFKEGDLVDISGKSIGKGFQGGIKRHNFKRGLMTHG-SKSHRALGSIGAGTTPGRVY 128

Query: 159 KNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKN 201
           K KKM GRMGG +  ++ L++V +D+   ++++KG VPG   N
Sbjct: 129 KGKKMPGRMGGTKTKIRKLKIVKIDNDLKVVMIKGAVPGKPGN 171


>gi|301300208|ref|ZP_07206420.1| 50S ribosomal protein L3 [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852149|gb|EFK79821.1| 50S ribosomal protein L3 [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 195

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/202 (38%), Positives = 116/202 (57%), Gaps = 9/202 (4%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V+   G  +PVTV+ +D+  V+  +T++ +GY A+Q+G  + +    +KP +G  + 
Sbjct: 1   MTQVFTENGELVPVTVVKVDSNVVLQVKTMENDGYEAIQLGFDDLREVLTNKPAKGHAAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129
            N +PK+ + E R   D +L    VG       F  G  VDVTG + G GF G++KR+  
Sbjct: 61  ANTTPKRFVREIR---DVELGEYKVGDEVKADIFEAGDFVDVTGTSKGHGFQGSIKRNGQ 117

Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLI 189
                 HG S  HR  GS G   +  RV K K + GRMGGNRVT++NLE+V  D + G++
Sbjct: 118 HRGPMAHG-SRYHRRPGSMGVIIN--RVMKGKLLPGRMGGNRVTIQNLEIVKADTENGVL 174

Query: 190 LVKGCVPGAKKNSWILVRDSFK 211
           L+KG VPGA K S + ++ + K
Sbjct: 175 LIKGNVPGANK-SLVTIKSTVK 195


>gi|197294631|ref|YP_001799172.1| 50S ribosomal protein L3 [Candidatus Phytoplasma australiense]
 gi|226730545|sp|B1VAE8|RL3_PHYAS RecName: Full=50S ribosomal protein L3
 gi|171853958|emb|CAM11921.1| 50S ribosomal protein L3 [Candidatus Phytoplasma australiense]
          Length = 221

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/215 (36%), Positives = 120/215 (55%), Gaps = 9/215 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++N +G  IP+T++ +    V+  + +  +GY A Q+G  + K K 
Sbjct: 1   MAQGILGKKIGMTQMFNEQGEIIPITIVDVSANVVLQQKNVAIDGYNATQIGFDDKKDKI 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD----DLLPVGSVFSPSYFTVGQLVDVTGMTI 116
            +KPM G F     +PK+ + E   +K++      L VG   S   F VG LVDVTG + 
Sbjct: 61  TTKPMLGHFKKAKTTPKRFIKEIIFKKENISSLSALAVGDQVSCDLFQVGDLVDVTGTSK 120

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           GKGF+G +KRHN      THG     R H   G         K KK+ G+MG   VT++N
Sbjct: 121 GKGFAGVIKRHNQSRGPETHG----SRHHRRPGSMGPIKGKIKGKKLPGQMGHQTVTIQN 176

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           L + SVD+++ L L+KG VPG  K  +++++ + K
Sbjct: 177 LVLFSVDNQKNLFLIKGSVPGPNK-GFVVIKSAVK 210


>gi|31544255|ref|NP_852833.1| 50S ribosomal protein L3 [Mycoplasma gallisepticum str. R(low)]
 gi|33860197|sp|O52332|RL3_MYCGA RecName: Full=50S ribosomal protein L3
 gi|31541099|gb|AAP56401.1| 50S ribosomal protein L3 [Mycoplasma gallisepticum str. R(low)]
 gi|284930294|gb|ADC30233.1| 50S ribosomal protein L3 [Mycoplasma gallisepticum str. R(high)]
 gi|284931061|gb|ADC30999.1| 50S ribosomal protein L3 [Mycoplasma gallisepticum str. F]
          Length = 236

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/215 (38%), Positives = 115/215 (53%), Gaps = 12/215 (5%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+   K+GMT V+   GR IPVT++ ++  QVV  +T +K+GY AVQ+G  +   KN++K
Sbjct: 3   GIFGTKVGMTQVFEENGRLIPVTLVRVEPNQVVSVKTKEKDGYDAVQLGFNQTDEKNLNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQ---KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           P  G F   N +  K L E R     K  DLL V  +F       GQ+VDV   T G+GF
Sbjct: 63  PQLGHFKKANTNNYKYLEEVRGMVGYKIGDLLKVEELFQE-----GQVVDVQARTKGRGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ---DPGRVFKNKKMAGRMGGNRVTVKNL 177
           +GA+KR NF      HG    HR  GS    +      RV K KKM+G  G   VT++NL
Sbjct: 118 TGAIKRWNFKIGSKGHGAGYPHRFQGSVQAGRGGSQAQRVMKGKKMSGHYGNELVTIQNL 177

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +V    +   +++ G +PGA  NS + +  S K+
Sbjct: 178 SIVGFLPEVSSVMISGAIPGA-NNSKVRITTSKKN 211


>gi|94968254|ref|YP_590302.1| 50S ribosomal protein L3 [Candidatus Koribacter versatilis
           Ellin345]
 gi|123381602|sp|Q1ISC2|RL3_ACIBL RecName: Full=50S ribosomal protein L3
 gi|94550304|gb|ABF40228.1| LSU ribosomal protein L3P [Candidatus Koribacter versatilis
           Ellin345]
          Length = 244

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 116/213 (54%), Gaps = 10/213 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVK 59
           M +G++ +K+GMT +++ +G   PVTVL    C +   +T +K+GY A QVG  E  K  
Sbjct: 1   MINGLIGKKIGMTQLFDSKGDVRPVTVLQAGPCVITQRKTANKDGYDAAQVGLVEFVKET 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKD-------DDLLPVGSVFSPSYFTVGQLVDVT 112
            ++K   G     ++ P + L EF +  D       +  + VG       F   + VDVT
Sbjct: 61  RLTKAQLGHLGKNDLPPVRTLHEFAIVADGPSEAESNGEVKVGDKVLVDLFEGSKFVDVT 120

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ G+GF+G +KRH F G   +HG     +  GS G    P RVFK  +MAG MG ++V
Sbjct: 121 GVSKGRGFAGVVKRHKFAGGARSHGSMF--QISGSIGSSAFPSRVFKGMRMAGHMGQDQV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWIL 205
           TV+NL ++ +D    L++V+G VPG K  +  +
Sbjct: 179 TVRNLRILGIDKDENLLVVEGAVPGPKDATVFI 211


>gi|229552708|ref|ZP_04441433.1| ribosomal protein L3 [Lactobacillus rhamnosus LMS2-1]
 gi|258509482|ref|YP_003172233.1| 50S ribosomal protein L3 [Lactobacillus rhamnosus GG]
 gi|258540679|ref|YP_003175178.1| 50S ribosomal protein L3 [Lactobacillus rhamnosus Lc 705]
 gi|229313914|gb|EEN79887.1| ribosomal protein L3 [Lactobacillus rhamnosus LMS2-1]
 gi|257149409|emb|CAR88382.1| LSU/50S ribosomal protein L3P [Lactobacillus rhamnosus GG]
 gi|257152355|emb|CAR91327.1| LSU/50S ribosomal protein L3P [Lactobacillus rhamnosus Lc 705]
 gi|259650761|dbj|BAI42923.1| 50S ribosomal protein L3 [Lactobacillus rhamnosus GG]
          Length = 210

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 121/212 (57%), Gaps = 5/212 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ +K+GMT V+   G  +PVTV+ +    V+  +T++ +GY AVQ+G G+ +    
Sbjct: 3   RKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQVKTVESDGYEAVQLGYGDMREVLT 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G     + +PK+ + E R     D   VGS      F  G +VDVTG + G G+ 
Sbjct: 63  NKPSVGHAKKADTTPKRFVREIRDVALSD-YEVGSEVKADEFAAGDIVDVTGTSKGHGYQ 121

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +K+         HG S  HR  GS G   +  +VFK KK+ GRMG +  T++NL+VV+
Sbjct: 122 GNIKKDGQSRGPMAHG-SRYHRRPGSLGAIIN--KVFKGKKLPGRMGNHTRTMQNLQVVA 178

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D +  ++L+KG VPGA K S++ +R + K+A
Sbjct: 179 ADTEHNVLLIKGNVPGANK-SFVTIRSAVKAA 209


>gi|199598832|ref|ZP_03212243.1| Ribosomal protein L3 [Lactobacillus rhamnosus HN001]
 gi|199590244|gb|EDY98339.1| Ribosomal protein L3 [Lactobacillus rhamnosus HN001]
          Length = 210

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 121/212 (57%), Gaps = 5/212 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ +K+GMT V+   G  +PVTV+ +    V+  +T++ +GY AVQ+G G+ +    
Sbjct: 3   RKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQVKTVESDGYEAVQLGYGDLREVLT 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G     + +PK+ + E R     D   VGS      F  G +VDVTG + G G+ 
Sbjct: 63  NKPSVGHAKKADTTPKRFVREIRDVALSD-YEVGSEVKADEFAAGDIVDVTGTSKGHGYQ 121

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +K+         HG S  HR  GS G   +  +VFK KK+ GRMG +  T++NL+VV+
Sbjct: 122 GNIKKDGQSRGPMAHG-SRYHRRPGSLGAIIN--KVFKGKKLPGRMGNHTRTMQNLQVVA 178

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D +  ++L+KG VPGA K S++ +R + K+A
Sbjct: 179 ADTEHNVLLIKGNVPGANK-SFVTIRSAVKAA 209


>gi|2766503|gb|AAB95387.1| ribosomal protein L3 [Mycoplasma gallisepticum]
          Length = 236

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/215 (38%), Positives = 115/215 (53%), Gaps = 12/215 (5%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+   K+GMT V+   GR IPVT++ ++  QVV  +T +K+GY AVQ+G  +   KN++K
Sbjct: 3   GIFGTKVGMTQVFEENGRLIPVTLVRVEPNQVVSVKTKEKDGYDAVQLGFNQTDEKNLNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQ---KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           P  G F   N +  K L E R     K  DLL V  +F       GQ+VDV   T G+GF
Sbjct: 63  PELGHFKKANTNNYKYLEEVRGMVGYKVGDLLKVEELFQE-----GQVVDVQARTKGRGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ---DPGRVFKNKKMAGRMGGNRVTVKNL 177
           +GA+KR NF      HG    HR  GS    +      RV K KKM+G  G   VT++NL
Sbjct: 118 TGAIKRWNFKIGSKGHGAGYPHRFQGSVQAGRGGSQAQRVMKGKKMSGHYGNELVTIQNL 177

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +V    +   +++ G +PGA  NS + +  S K+
Sbjct: 178 SIVGFLPEVSSVMISGAIPGA-NNSKVRITTSKKN 211


>gi|87306538|ref|ZP_01088685.1| 50S ribosomal protein L3 [Blastopirellula marina DSM 3645]
 gi|87290717|gb|EAQ82604.1| 50S ribosomal protein L3 [Blastopirellula marina DSM 3645]
          Length = 217

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 108/203 (53%), Gaps = 17/203 (8%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V++  G  IPVTV+    C V+  ++ +++GY AVQ+G  +   +  ++  RG  + 
Sbjct: 1   MTQVFDESGNIIPVTVIEAGPCHVLQLKSQERDGYEAVQLGFDDKPRRLANRSERGQVAP 60

Query: 72  VNVSPKKKLFEFRVQKD--DDLLPVGSVF----SPSYFTVGQ-----------LVDVTGM 114
           ++    KKL    V+     D  P   V     S   F +GQ            VD+ G 
Sbjct: 61  LSSKRAKKLAAAGVEASAKPDCEPKRFVRELRGSTEGFEIGQEVSVGVLSDVKAVDIVGT 120

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           + G+G++G MKRHNF G RATHGV   HR  G TGC   P R FK   M+G+ G  +VT 
Sbjct: 121 SKGRGYAGVMKRHNFAGQRATHGVKKVHRHTGGTGCSAYPSRTFKGLNMSGQYGNAKVTQ 180

Query: 175 KNLEVVSVDDKRGLILVKGCVPG 197
           +N++VV VD++  LILV G  PG
Sbjct: 181 RNVKVVKVDEENNLILVYGAAPG 203


>gi|282852649|ref|ZP_06261991.1| 50S ribosomal protein L3 [Lactobacillus gasseri 224-1]
 gi|282556391|gb|EFB62011.1| 50S ribosomal protein L3 [Lactobacillus gasseri 224-1]
          Length = 209

 Score =  122 bits (305), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 85/213 (39%), Positives = 120/213 (56%), Gaps = 5/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++   G  +PVTV+      V+  +T + +GY AVQVG  + +   
Sbjct: 1   MTKGILGRKVGMTQIFTKNGILVPVTVIEATPNVVLQVKTNESDGYEAVQVGYQDMREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    SPK+ + E R  +  D   VGS  +   F+ G +VDVTG T G G 
Sbjct: 61  SNKPAKGHAAKAKTSPKRFIREIRDVELKD-YEVGSEITVDSFSEGDVVDVTGTTRGHGT 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR        THG S  HR  GS G   +  RV K KK+ G MGG +VTV+NL + 
Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSIIN--RVPKGKKLPGHMGGKKVTVQNLVIE 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ ++LVKG VPGA KNS I V+ + K+A
Sbjct: 177 KVAPEKNVLLVKGNVPGA-KNSLIFVKSAAKAA 208


>gi|237733228|ref|ZP_04563709.1| 50S ribosomal protein L3 [Mollicutes bacterium D7]
 gi|229383609|gb|EEO33700.1| 50S ribosomal protein L3 [Coprobacillus sp. D7]
          Length = 232

 Score =  121 bits (304), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 118/212 (55%), Gaps = 12/212 (5%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V+  +G  IPVTV+  D   V+  +T+  +GY A+QVG  + + K  +K   G    
Sbjct: 1   MTQVFTTDGLLIPVTVVEADANVVLQKKTVATDGYDAIQVGFEDKREKLANKAELGIVKK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLL--PVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129
            N +PK+ + EFR    D+++   VG   +   F  G++VDVTG + GKG+ G +KRH  
Sbjct: 61  ANTAPKRFIKEFRY---DEMMSYEVGDKITVDSFVAGEVVDVTGTSKGKGYQGVIKRHGQ 117

Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLI 189
                 HG S +HR  GS G    P R+   KK+ G+MG    TV+NLEVV+VD +  L+
Sbjct: 118 RIGPKGHG-SGAHRIVGSMGPIA-PNRIAPGKKLPGQMGHVTRTVQNLEVVAVDVENNLL 175

Query: 190 LVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
           L+KG VPG KK   I+     KS +   GKV+
Sbjct: 176 LIKGSVPGPKKGLVIV-----KSGIKAAGKVN 202


>gi|307103242|gb|EFN51504.1| hypothetical protein CHLNCDRAFT_48352 [Chlorella variabilis]
          Length = 215

 Score =  121 bits (304), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 83/200 (41%), Positives = 104/200 (52%), Gaps = 6/200 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62
           GV   K GM   +  +G  +P TV+ L+   +V H +T +K+GY AVQVG    +   ++
Sbjct: 6   GVWGTKAGMMQFFK-DGASLPATVIALEGGNIVTHVKTAEKDGYTAVQVGYKTCREDKIT 64

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKGFS 121
           KP  G          K L EF+V KD      G   +    F  G +VDV G TIGKGF 
Sbjct: 65  KPELGHLQKAGAPAMKHLREFKV-KDASGYEAGQQLNLVDMFKAGDMVDVAGTTIGKGFQ 123

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F     THG S S R HGSTG    PGRVF   K AG+MG  R  +K  EV+ 
Sbjct: 124 GGIKRWGFARGNMTHG-SKSKREHGSTGPGSSPGRVFPGLKAAGQMGNVRRKLK-AEVLL 181

Query: 182 VDDKRGLILVKGCVPGAKKN 201
           VD +   I+VKG VPG   N
Sbjct: 182 VDAENSAIVVKGSVPGKPGN 201


>gi|786153|dbj|BAA08831.1| ribosomal protein L3 [Bacillus subtilis]
          Length = 162

 Score =  121 bits (304), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 102/165 (61%), Gaps = 4/165 (2%)

Query: 48  AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
           A+Q+G  + + K  +KP +G  +    +PK+ + E R   + D   VG       F+ G+
Sbjct: 1   AIQLGFDDKREKLSNKPEKGHVAKAETAPKRFVKELR-GVEMDAYEVGQEVKVEIFSAGE 59

Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
           +VDVTG++ GKGF GA+KRH       +HG S  HR  GS G   DP RVFK K + GRM
Sbjct: 60  IVDVTGVSKGKGFQGAIKRHGQSRGPMSHG-SRYHRRPGSMGP-VDPNRVFKGKLLPGRM 117

Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           GG ++TV+NLE+V VD +R L+L+KG VPGAKK S I V+ + KS
Sbjct: 118 GGEQITVQNLEIVKVDAERNLLLIKGNVPGAKK-SLITVKSAVKS 161


>gi|320108396|ref|YP_004183986.1| 50S ribosomal protein L3 [Terriglobus saanensis SP1PR4]
 gi|319926917|gb|ADV83992.1| 50S ribosomal protein L3 [Terriglobus saanensis SP1PR4]
          Length = 242

 Score =  121 bits (303), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 114/209 (54%), Gaps = 6/209 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVKNV 61
           +G++ RK+GMT V++  G   P+TV+    C +   +T+ K+GY A Q+G  E  K   +
Sbjct: 4   TGILGRKIGMTQVFDERGDVHPITVIKAGPCVITQLKTMQKDGYEAAQIGLVEFVKASKI 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQ---KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           +K M G F+  +V P K + E   +   + ++ +  G       F   + VDV G + G+
Sbjct: 64  NKAMTGHFAKSSVPPVKIIREVPFEASAEGEEAVKSGDRVLIDIFENAKFVDVIGTSKGR 123

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF+G ++RH FGG   +HG     +  GS G    P RVF  ++M G MG  ++TV+NL 
Sbjct: 124 GFAGVIRRHGFGGGPKSHGHMF--QVQGSIGASSFPSRVFPGQRMPGHMGAAQITVRNLR 181

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVR 207
           +  +D +  LI+V+G VPG +    ++ R
Sbjct: 182 IRGIDLEDNLIMVEGAVPGPRDGVVLVSR 210


>gi|72080533|ref|YP_287591.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae 7448]
 gi|109893525|sp|Q4A8H1|RL3_MYCH7 RecName: Full=50S ribosomal protein L3
 gi|71913657|gb|AAZ53568.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae 7448]
          Length = 230

 Score =  121 bits (303), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 121/220 (55%), Gaps = 7/220 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GM+ ++  EG  IPV+++ +    V    T +KN Y A+Q+ A + K     K
Sbjct: 3   GILGKKVGMSQLFTTEGIAIPVSIIEVPENIVTKIITKEKNSYNAIQLAAFDKKQSRFLK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+  N  PK+ + EFR   D     +G     S F+ G+ VDVTG + GKGF+G 
Sbjct: 63  PEIGHFAKANTKPKRFIKEFR---DFQGYKLGQTVDVSIFSPGEFVDVTGTSKGKGFAGT 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181
           +KR+N      +HG     +    TG   D    +V K   M GR+G  +VT ++LE++ 
Sbjct: 120 IKRYNQAIGPRSHGGGGGSKPIRQTGSLGDISGNKVVKGMTMPGRLGHEKVTKQSLEIIK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
           VD +  L+++KG VPG KK S+++++ + K   N K  VS
Sbjct: 180 VDKENNLLVLKGSVPGPKK-SFLVIKSAIKKP-NPKNPVS 217


>gi|116628963|ref|YP_814135.1| 50S ribosomal protein L3 [Lactobacillus gasseri ATCC 33323]
 gi|238853483|ref|ZP_04643861.1| 50S ribosomal protein L3 [Lactobacillus gasseri 202-4]
 gi|122274039|sp|Q046C5|RL3_LACGA RecName: Full=50S ribosomal protein L3
 gi|116094545|gb|ABJ59697.1| LSU ribosomal protein L3P [Lactobacillus gasseri ATCC 33323]
 gi|238833923|gb|EEQ26182.1| 50S ribosomal protein L3 [Lactobacillus gasseri 202-4]
          Length = 209

 Score =  121 bits (303), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 85/213 (39%), Positives = 120/213 (56%), Gaps = 5/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++   G  +PVTV+      V+  +T + +GY AVQVG  + +   
Sbjct: 1   MTKGILGRKVGMTQIFTKNGILVPVTVIEATPNVVLQVKTNESDGYEAVQVGYQDMREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    SPK+ + E R  +  D   VGS  +   F+ G +VDVTG T G G 
Sbjct: 61  SNKPAKGHAAKAKTSPKRFIREIRDVELKD-YEVGSEITVDSFSEGDVVDVTGTTRGHGT 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR        THG S  HR  GS G   +  RV K KK+ G MGG +VTV+NL + 
Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSIIN--RVPKGKKLPGHMGGKKVTVQNLVIE 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ ++LVKG VPGA KNS I V+ + K+A
Sbjct: 177 KVVPEKNVLLVKGNVPGA-KNSLIFVKSAAKAA 208


>gi|42518429|ref|NP_964359.1| 50S ribosomal protein L3 [Lactobacillus johnsonii NCC 533]
 gi|268318851|ref|YP_003292507.1| ribosomal protein L3 [Lactobacillus johnsonii FI9785]
 gi|300362389|ref|ZP_07058565.1| 50S ribosomal protein L3 [Lactobacillus gasseri JV-V03]
 gi|81832300|sp|Q74L88|RL3_LACJO RecName: Full=50S ribosomal protein L3
 gi|41582714|gb|AAS08325.1| 50S ribosomal protein L3 [Lactobacillus johnsonii NCC 533]
 gi|262397226|emb|CAX66240.1| ribosomal protein L3 [Lactobacillus johnsonii FI9785]
 gi|300353380|gb|EFJ69252.1| 50S ribosomal protein L3 [Lactobacillus gasseri JV-V03]
 gi|329666692|gb|AEB92640.1| 50S ribosomal protein L3 [Lactobacillus johnsonii DPC 6026]
          Length = 209

 Score =  120 bits (302), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 84/213 (39%), Positives = 120/213 (56%), Gaps = 5/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++   G  +PVTV+      V+  +T + +GY AVQVG  + +   
Sbjct: 1   MTKGILGRKVGMTQIFTKNGILVPVTVIEATPNVVLQVKTNESDGYEAVQVGYQDMREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    SPK+ + E R  +  D   VGS  +   F+ G +VDVTG T G G 
Sbjct: 61  SNKPAKGHAAKAKTSPKRFIREIRDVELKD-YEVGSEITVDSFSEGDVVDVTGTTRGHGT 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR        THG S  HR  GS G   +  RV K KK+ G MGG +VTV+NL + 
Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSIIN--RVPKGKKLPGHMGGKKVTVQNLVIE 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ ++L+KG VPGA KNS I V+ + K+A
Sbjct: 177 KVVPEKNVLLIKGNVPGA-KNSLIFVKSAAKAA 208


>gi|71893546|ref|YP_278992.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae J]
 gi|109893526|sp|Q4AAE0|RL3_MYCHJ RecName: Full=50S ribosomal protein L3
 gi|71851673|gb|AAZ44281.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae J]
          Length = 230

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 121/220 (55%), Gaps = 7/220 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GM+ ++  EG  IPV+++ +    V    T +KN Y A+Q+ A + K     K
Sbjct: 3   GILGKKVGMSQLFTTEGIAIPVSIIEVPENIVTKIITKEKNSYDAIQLAAFDKKQSRFLK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+  N  PK+ + EFR   D     +G     S F+ G+ VDVTG + GKGF+G 
Sbjct: 63  PEIGHFAKANTKPKRFIKEFR---DFQGYKLGQTVDVSIFSPGEFVDVTGTSKGKGFAGT 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181
           +KR+N      +HG     +    TG   D    +V K   M GR+G  +VT ++LE++ 
Sbjct: 120 IKRYNQAIGPRSHGGGGGSKPIRQTGSLGDISGNKVVKGMTMPGRLGHEKVTKQSLEIIK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
           VD +  L+++KG VPG KK S+++++ + K   N K  VS
Sbjct: 180 VDKENNLLVLKGSVPGPKK-SFLVIKSAIKKP-NPKNPVS 217


>gi|227888853|ref|ZP_04006658.1| 50S ribosomal protein L3 [Lactobacillus johnsonii ATCC 33200]
 gi|227850690|gb|EEJ60776.1| 50S ribosomal protein L3 [Lactobacillus johnsonii ATCC 33200]
          Length = 209

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/213 (39%), Positives = 120/213 (56%), Gaps = 5/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++   G  +PVTV+      V+  +T + +GY AVQVG  + +   
Sbjct: 1   MTKGILGRKVGMTQIFTKNGVLVPVTVIEATPNVVLQVKTNESDGYEAVQVGYQDMREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    SPK+ + E R  +  D   VGS  +   F+ G +VDVTG T G G 
Sbjct: 61  SNKPAKGHAAKAKTSPKRFIREIRDVELKD-YEVGSEITVDSFSEGDVVDVTGTTRGHGT 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR        THG S  HR  GS G   +  RV K KK+ G MGG +VTV+NL + 
Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSIIN--RVPKGKKLPGHMGGKKVTVQNLVIE 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ ++L+KG VPGA KNS I V+ + K+A
Sbjct: 177 KVVPEKNVLLIKGNVPGA-KNSLIFVKSAAKAA 208


>gi|312601074|gb|ADQ90329.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae 168]
          Length = 230

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 121/220 (55%), Gaps = 7/220 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GM+ ++  EG  IPV+++ +    V    T +KN Y A+Q+ A + K     K
Sbjct: 3   GILGKKVGMSQLFTTEGIAIPVSIIEVPENIVTKIITKEKNSYDAIQLAAFDKKQSRFLK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+  N  PK+ + EFR   D     +G     S F+ G+ VDVTG + GKGF+G 
Sbjct: 63  PEIGHFAKANTKPKRFIKEFR---DFQGYKLGQTVDVSIFSPGEFVDVTGTSKGKGFAGT 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181
           +KR+N      +HG     +    TG   D    +V K   M GR+G  +VT ++LE++ 
Sbjct: 120 IKRYNQAIGPRSHGGGGGSKPIRQTGSLGDISGNKVVKGMTMPGRLGHEKVTKQSLEIIK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
           VD +  L+++KG VPG KK S+++++ + K   N K  VS
Sbjct: 180 VDKENNLLVLKGSVPGPKK-SFLVIKSAIKKP-NPKNPVS 217


>gi|116327224|ref|YP_796944.1| 50S ribosomal protein L3 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116327264|ref|YP_796984.1| 50S ribosomal protein L3 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116332122|ref|YP_801840.1| 50S ribosomal protein L3 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122280148|sp|Q04PT8|RL3_LEPBJ RecName: Full=50S ribosomal protein L3
 gi|122284929|sp|Q055E4|RL3_LEPBL RecName: Full=50S ribosomal protein L3
 gi|116119968|gb|ABJ78011.1| 50S Ribosomal protein L3 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116120008|gb|ABJ78051.1| 50S Ribosomal protein L3 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125811|gb|ABJ77082.1| 50S Ribosomal protein L3 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 206

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 110/199 (55%), Gaps = 4/199 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GM+ +++ +G  IPVTVL +  C V   ++++ +GY A+Q+   + K   
Sbjct: 1   MAKGLIGKKVGMSQIFDEQGNIIPVTVLEVGPCAVSQVKSVENDGYEAIQLAFQDTKEFQ 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKG 119
           +SK  +   +  ++ PKK L EFR   D      GSV      F V  +V VTG++ G+G
Sbjct: 61  ISKAEKNHLAKASLGPKKVLREFRSFGDSPA--TGSVLKVQDIFAVSDVVKVTGVSKGRG 118

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KRH           S  HR  GS G    P RVFK  K+ GR G  + TV+NL+V
Sbjct: 119 FQGVVKRHG-HAGGPGGHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQQTTVRNLKV 177

Query: 180 VSVDDKRGLILVKGCVPGA 198
           V +++++ L+ V G VPG 
Sbjct: 178 VRINEEKNLVFVSGAVPGT 196


>gi|301774558|ref|XP_002922699.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like [Ailuropoda
           melanoleuca]
          Length = 348

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 118/212 (55%), Gaps = 9/212 (4%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59
           R G++A KLGM  ++  +GR+  VT+L + +C V+ +   +  NG MA + VG   A   
Sbjct: 96  RVGLIALKLGMMPLWTKDGRKHVVTLLQVQDCHVLKYTPKENHNGKMAALTVGGKTASRF 155

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           + S  +  F+  + + PK+K+  F V  D+ ++  G+    ++F  GQ VDVT  TIGKG
Sbjct: 156 HKSTSVLEFYQELGLPPKQKVKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 214

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           F G MKR  F G  ATHG + +HR  G  STG   D  R++   KM G+MG    T   L
Sbjct: 215 FQGVMKRWGFKGQPATHGQTKTHRRPGAISTG---DVARIWPGTKMPGQMGNRDRTAYGL 271

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +V  ++ K  +I V G VPG  KN  + +RDS
Sbjct: 272 KVWRINTKHNVIYVNGSVPG-HKNCLVKIRDS 302


>gi|281351379|gb|EFB26963.1| hypothetical protein PANDA_011694 [Ailuropoda melanoleuca]
          Length = 317

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 118/212 (55%), Gaps = 9/212 (4%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59
           R G++A KLGM  ++  +GR+  VT+L + +C V+ +   +  NG MA + VG   A   
Sbjct: 66  RVGLIALKLGMMPLWTKDGRKHVVTLLQVQDCHVLKYTPKENHNGKMAALTVGGKTASRF 125

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           + S  +  F+  + + PK+K+  F V  D+ ++  G+    ++F  GQ VDVT  TIGKG
Sbjct: 126 HKSTSVLEFYQELGLPPKQKVKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 184

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           F G MKR  F G  ATHG + +HR  G  STG   D  R++   KM G+MG    T   L
Sbjct: 185 FQGVMKRWGFKGQPATHGQTKTHRRPGAISTG---DVARIWPGTKMPGQMGNRDRTAYGL 241

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +V  ++ K  +I V G VPG  KN  + +RDS
Sbjct: 242 KVWRINTKHNVIYVNGSVPG-HKNCLVKIRDS 272


>gi|149632093|ref|XP_001514282.1| PREDICTED: similar to Mitochondrial ribosomal protein L3
           [Ornithorhynchus anatinus]
          Length = 429

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/211 (37%), Positives = 116/211 (54%), Gaps = 8/211 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYM-AVQVGAGEAKVKN 60
           R G++A KLGM  ++   G++  VT+L + +C VV +   +  G + A+ VG   A    
Sbjct: 178 RVGLIALKLGMMPLWTKNGKKHAVTLLQVQDCHVVKYTPSEGAGKLGALTVGGKNASPFY 237

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+     +    V PK+++  FRV ++  + P G+    ++F  GQ VDVT  TIGKGF
Sbjct: 238 KSEESLEMYREAGVPPKQRIKIFRVTENAKIKP-GTPLYAAHFRPGQYVDVTAKTIGKGF 296

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
            G MKR  F G  ATHG + +HR  G  STG   D  RV+  KKM G+MG    T   L+
Sbjct: 297 QGVMKRWGFKGQPATHGQTKTHRRPGAISTG---DIARVWPGKKMPGQMGNRYQTAFGLK 353

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           V  ++ K  +I V G VPG  K+ ++ +RD+
Sbjct: 354 VWRINTKHNIIYVNGSVPG-HKSCFVKIRDT 383


>gi|304373190|ref|YP_003856399.1| 50S ribosomal protein L3 [Mycoplasma hyorhinis HUB-1]
 gi|304309381|gb|ADM21861.1| 50S ribosomal protein L3 [Mycoplasma hyorhinis HUB-1]
 gi|330723950|gb|AEC46320.1| 50S ribosomal protein L3 [Mycoplasma hyorhinis MCLD]
          Length = 231

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/212 (35%), Positives = 117/212 (55%), Gaps = 7/212 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++  EG  IPVTV+ +    V    T DKNGY A+Q+ A + K    +K
Sbjct: 3   GILGKKVGMTQLFTEEGISIPVTVVEVQPNVVTNVLTKDKNGYEAIQLAAFDKKKSRFTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F   +  PK+ + EFR  + +    +G     S F  G+ VDV G + GKGF+G 
Sbjct: 63  PELGHFKKADTEPKRFVKEFRNMQAE----LGQKVDLSIFEEGEFVDVVGTSKGKGFAGT 118

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181
           +KR+N      +HG     +    TG   D    +V K   M G +G  R TV+NLE++ 
Sbjct: 119 IKRYNQHIGPKSHGGGGGSKPIRQTGSIGDISGNKVVKGMTMPGHLGHERTTVQNLEIIK 178

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           +D    ++++KG VPG KK S++++++S K A
Sbjct: 179 IDLTNNILVIKGSVPGPKK-SFLVIKESVKQA 209


>gi|320526869|ref|ZP_08028059.1| 50S ribosomal protein L3 [Solobacterium moorei F0204]
 gi|320132837|gb|EFW25377.1| 50S ribosomal protein L3 [Solobacterium moorei F0204]
          Length = 253

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/211 (38%), Positives = 116/211 (54%), Gaps = 8/211 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT V+ IEG  IPVTV+ +    V+  +T + +GY AVQ+G  + K +  +K
Sbjct: 3   GILGRKLGMTQVFTIEGTLIPVTVIDVKPNVVLQKKTKEVDGYEAVQLGYEDVKEQRSNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           P  G     N +PK  + E R    D++  L VG+      F  G +VDV G + GKG+S
Sbjct: 63  PAIGHAKKANTAPKHYIKELRA---DEMMNLEVGAEVKADLFKAGDVVDVQGTSKGKGYS 119

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCR-QDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           G + R+N      THG S  HR  GS     ++ G V K   M G+ G    T +NL +V
Sbjct: 120 GTIVRNNAARGPMTHG-SGHHRHIGSLATNGRNNGVVNKGTVMPGQEGVYTTTNQNLTIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD + G ILVKG VPG +K   ++++ + K
Sbjct: 179 KVDAEEGYILVKGNVPGPRK-GLVVIKTTVK 208


>gi|240047259|ref|YP_002960647.1| 50S ribosomal protein L3 [Mycoplasma conjunctivae HRC/581]
 gi|239984831|emb|CAT04821.1| 50S ribosomal protein L3 [Mycoplasma conjunctivae]
          Length = 225

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 115/210 (54%), Gaps = 6/210 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++   G  IPVTV+ +    V    T +KN Y A+Q+   + K    +K
Sbjct: 3   GILGKKVGMTQLFTDHGIAIPVTVIEVQPNIVTNVLTQEKNSYDAIQLSVFDKKASRFNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F   N +PKK + EFR   + D    G V   S F  G+ VDV G + GKGF+G 
Sbjct: 63  PELGHFQKANTTPKKFVKEFR---NFDGYKSGDVVDLSIFEAGEFVDVVGTSKGKGFAGT 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181
           +KR+N      +HG     +    TG   D    +V K   M G +G  RVT++NLE++ 
Sbjct: 120 IKRYNQAIGPRSHGGGGGSKPIRQTGSIGDISGNKVVKGMTMPGHLGHERVTLQNLEIIK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           VD +  +++VKG +PG KK S+++++ + K
Sbjct: 180 VDVENSILVVKGSIPGPKK-SFVIIKSASK 208


>gi|259500892|ref|ZP_05743794.1| 50S ribosomal protein L3 [Lactobacillus iners DSM 13335]
 gi|302190655|ref|ZP_07266909.1| 50S ribosomal protein L3 [Lactobacillus iners AB-1]
 gi|309803703|ref|ZP_07697793.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 11V1-d]
 gi|309804974|ref|ZP_07699032.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 09V1-c]
 gi|309806693|ref|ZP_07700688.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 03V1-b]
 gi|309808420|ref|ZP_07702319.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 01V1-a]
 gi|309809118|ref|ZP_07702991.1| 50S ribosomal protein L3 [Lactobacillus iners SPIN 2503V10-D]
 gi|312871230|ref|ZP_07731328.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 3008A-a]
 gi|312872706|ref|ZP_07732771.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2062A-h1]
 gi|312874007|ref|ZP_07734042.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2052A-d]
 gi|312874981|ref|ZP_07735000.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2053A-b]
 gi|315654026|ref|ZP_07906942.1| 50S ribosomal protein L3 [Lactobacillus iners ATCC 55195]
 gi|325912351|ref|ZP_08174747.1| 50S ribosomal protein L3 [Lactobacillus iners UPII 143-D]
 gi|325913214|ref|ZP_08175583.1| 50S ribosomal protein L3 [Lactobacillus iners UPII 60-B]
 gi|329920622|ref|ZP_08277309.1| 50S ribosomal protein L3 [Lactobacillus iners SPIN 1401G]
 gi|259167586|gb|EEW52081.1| 50S ribosomal protein L3 [Lactobacillus iners DSM 13335]
 gi|308164301|gb|EFO66558.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 11V1-d]
 gi|308165734|gb|EFO67959.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 09V1-c]
 gi|308166873|gb|EFO69057.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 03V1-b]
 gi|308168248|gb|EFO70367.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 01V1-a]
 gi|308170563|gb|EFO72583.1| 50S ribosomal protein L3 [Lactobacillus iners SPIN 2503V10-D]
 gi|311089726|gb|EFQ48151.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2053A-b]
 gi|311090347|gb|EFQ48756.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2052A-d]
 gi|311091748|gb|EFQ50127.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2062A-h1]
 gi|311093244|gb|EFQ51590.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 3008A-a]
 gi|315488722|gb|EFU78368.1| 50S ribosomal protein L3 [Lactobacillus iners ATCC 55195]
 gi|325475822|gb|EGC78992.1| 50S ribosomal protein L3 [Lactobacillus iners UPII 143-D]
 gi|325477478|gb|EGC80621.1| 50S ribosomal protein L3 [Lactobacillus iners UPII 60-B]
 gi|328935880|gb|EGG32340.1| 50S ribosomal protein L3 [Lactobacillus iners SPIN 1401G]
          Length = 209

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/215 (39%), Positives = 122/215 (56%), Gaps = 9/215 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V++  G  +PVTV+      V+  +T + +GY AVQVG  + +   
Sbjct: 1   MTKGILGRKVGMTQVFSKNGILVPVTVIEATPNVVLQVKTNESDGYEAVQVGYQDVREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
            +KP +G  +    +PK+ + E R   D +L    VGS      F+ G +VDVTG + G 
Sbjct: 61  SNKPAKGHAAKAKTAPKRFIREIR---DVELEGYEVGSEIKVDTFSEGDVVDVTGTSKGH 117

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           G  G +KR        THG S  HR  GS G   +  RV K KK+ G MGG +VTV+NL 
Sbjct: 118 GTQGNIKRWGQSRGPETHG-SRYHRIPGSMGSIIN--RVPKGKKLPGHMGGKQVTVQNLV 174

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           +  V  ++ ++L+KG VPGA KNS I+V+ + K+A
Sbjct: 175 IEKVVPEKNVLLIKGNVPGA-KNSLIIVKSAVKAA 208


>gi|162450261|ref|YP_001612628.1| 50S ribosomal protein L3 [Sorangium cellulosum 'So ce 56']
 gi|254803690|sp|A9FQE0|RL3_SORC5 RecName: Full=50S ribosomal protein L3
 gi|161160843|emb|CAN92148.1| 50S ribosomal protein L3 [Sorangium cellulosum 'So ce 56']
          Length = 232

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 111/210 (52%), Gaps = 4/210 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++N  G  +  TV+    C V+  RTL+K+GY A+ +G GE   K+ +K
Sbjct: 6   GIIGKKIGMTQIFNETGEVLRCTVVQA-GCVVIGKRTLEKDGYSALILGLGERAEKHTTK 64

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFS-PSYFTVGQLVDVTGMTIGKGFS 121
           P+ G +     +PK+ + E R   +      +G+       F VGQ VD  G + G+GFS
Sbjct: 65  PVAGAYKKSGQTPKRIVRELRCSPEHAAKYEIGTTLKVDEIFEVGQRVDAQGRSRGRGFS 124

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G ++R +F G   +HG     R  GS G    PGR     KM G  G   V+  NL++  
Sbjct: 125 GVIRRWSFAGAVNSHGTHEYFRHGGSIGTNMTPGRTLPGLKMPGHYGDETVSALNLKIAK 184

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +  +  LIL++G VPG  KN  + +R + K
Sbjct: 185 LLPEDNLILIEGPVPGP-KNQVVTIRGAVK 213


>gi|161611308|ref|YP_007411.2| 50S ribosomal protein L3 [Candidatus Protochlamydia amoebophila
           UWE25]
          Length = 221

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/216 (35%), Positives = 114/216 (52%), Gaps = 10/216 (4%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN---- 60
           ++ +K GM  +++ +G  I  TV+  +   +   +T + +GY A+Q+G  +   K     
Sbjct: 5   MMGKKRGMIQLFDEKGNAIVCTVIQAEPNVITQIKTKETDGYTALQLGFEKVTGKTQHTI 64

Query: 61  ---VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
                KP  G F    V  ++ L E R+   ++   +G   S   F   + VD T ++ G
Sbjct: 65  EARTGKPRLGHFKKAGVESRRFLVESRLDSTEEYT-LGQEISVDTFNGIEFVDATAISKG 123

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KG+ G MKRHNF G  A+HG S  HR  GSTG R  PGR     K AG+MG  RVTV+NL
Sbjct: 124 KGYQGVMKRHNFAGGPASHG-SGHHRHAGSTGMRSTPGRGLPGGKKAGQMGNERVTVQNL 182

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +V VD +  +I+VKG VPG  +N  + +  + K A
Sbjct: 183 RIVKVDSENHVIVVKGQVPGP-RNGLVYITQAKKLA 217


>gi|218282171|ref|ZP_03488470.1| hypothetical protein EUBIFOR_01052 [Eubacterium biforme DSM 3989]
 gi|218216850|gb|EEC90388.1| hypothetical protein EUBIFOR_01052 [Eubacterium biforme DSM 3989]
          Length = 235

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/216 (37%), Positives = 119/216 (55%), Gaps = 8/216 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RKLGMT V+  +G  IPVTV+ +    V+  +T++ +GY AVQ+G  E K K 
Sbjct: 5   MMKGLLGRKLGMTQVFTEDGVLIPVTVVEVTPNVVLQKKTVETDGYNAVQLGFEEIKEKR 64

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            +K   G     N SPK+ + E R   D D+ + VG + +   F  G+ VDV G + GKG
Sbjct: 65  TTKANIGHCKKANTSPKRFIKEVR---DCDMDVNVGDLVNVDIFAAGETVDVIGTSKGKG 121

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGS---TGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           ++G + R+N      THG S + R  GS    G     GR+ K   MAG+ GG   T +N
Sbjct: 122 YNGTIVRNNAHQGPKTHGGSKNIRHIGSLATNGITSRQGRIMKGTIMAGQEGGYTTTNQN 181

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           L V+ VD +   +L+KG VPG +K   ++VR +  S
Sbjct: 182 LTVIKVDTENNYMLIKGNVPGPRK-GCVMVRTAKTS 216


>gi|81829049|sp|Q6ME63|RL3_PARUW RecName: Full=50S ribosomal protein L3
 gi|46399687|emb|CAF23136.1| probable 50S ribosomal protein L3 [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 235

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/216 (35%), Positives = 114/216 (52%), Gaps = 10/216 (4%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN---- 60
           ++ +K GM  +++ +G  I  TV+  +   +   +T + +GY A+Q+G  +   K     
Sbjct: 19  MMGKKRGMIQLFDEKGNAIVCTVIQAEPNVITQIKTKETDGYTALQLGFEKVTGKTQHTI 78

Query: 61  ---VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
                KP  G F    V  ++ L E R+   ++   +G   S   F   + VD T ++ G
Sbjct: 79  EARTGKPRLGHFKKAGVESRRFLVESRLDSTEEYT-LGQEISVDTFNGIEFVDATAISKG 137

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KG+ G MKRHNF G  A+HG S  HR  GSTG R  PGR     K AG+MG  RVTV+NL
Sbjct: 138 KGYQGVMKRHNFAGGPASHG-SGHHRHAGSTGMRSTPGRGLPGGKKAGQMGNERVTVQNL 196

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +V VD +  +I+VKG VPG  +N  + +  + K A
Sbjct: 197 RIVKVDSENHVIVVKGQVPGP-RNGLVYITQAKKLA 231


>gi|13507904|ref|NP_109853.1| 50S ribosomal protein L3 [Mycoplasma pneumoniae M129]
 gi|2500227|sp|P75580|RL3_MYCPN RecName: Full=50S ribosomal protein L3
 gi|1674371|gb|AAB96314.1| ribosomal protein L3 [Mycoplasma pneumoniae M129]
          Length = 287

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 114/212 (53%), Gaps = 8/212 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+   K+GM+ V+     R+P+TV++ +  QV   +T  K+ Y A  +     + K ++K
Sbjct: 5   GIFGVKVGMSQVFTTNNERLPITVIYCEPNQVAGVKTEAKDKYSATLLSFDTVENKKLNK 64

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSG 122
           P +GFF   N+ P K L E R     ++   G   +P + F VG+ VDV+ ++ G+GF+G
Sbjct: 65  PQQGFFEKNNLKPTKHLQEIRNMTGFEM---GQQITPQNLFQVGEYVDVSAISKGRGFTG 121

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQ---DPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           A+KR NF      HG    HR  GS    +      RVFK KKM+G  G  +VTV+NL +
Sbjct: 122 AIKRWNFKIGPLGHGAGYPHRFQGSVQAGRGGASAQRVFKGKKMSGHYGHEKVTVQNLRI 181

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V  D+   L+LV G + G  +   +L+R + K
Sbjct: 182 VGFDEANMLVLVSGAIAGP-EGGVVLIRTAKK 212


>gi|28377832|ref|NP_784724.1| 50S ribosomal protein L3 [Lactobacillus plantarum WCFS1]
 gi|300767821|ref|ZP_07077731.1| 50S ribosomal protein L3 [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308180011|ref|YP_003924139.1| 50S ribosomal protein L3 [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|42559624|sp|Q88XY6|RL3_LACPL RecName: Full=50S ribosomal protein L3
 gi|28270665|emb|CAD63571.1| ribosomal protein L3 [Lactobacillus plantarum WCFS1]
 gi|300494806|gb|EFK29964.1| 50S ribosomal protein L3 [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308045502|gb|ADN98045.1| 50S ribosomal protein L3 [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 209

 Score =  119 bits (297), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 118/209 (56%), Gaps = 5/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V+   G  +PVTV+ +    V+  +T++ +GY A+Q+G  + +    +K
Sbjct: 5   GILGKKVGMTQVFTESGELVPVTVVEVQPNVVLQVKTVENDGYEAIQLGVDDKREVLTNK 64

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G  +    +PK+ + E R  +  D   VG       F  G  VDVTG+T G G+ G 
Sbjct: 65  PAQGHAAKAKTTPKRFIREIRNVELGDYT-VGDEVKADIFAAGDAVDVTGITKGHGYQGN 123

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           + +         HG S  HR  GS G   +  RVFK KK+ GRMG ++ T++NL++V  D
Sbjct: 124 IHKDGQSRGPMAHG-SRYHRRPGSMGAIIN--RVFKGKKLPGRMGNHQRTMQNLQIVRAD 180

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  ++L+KG VPGA K S++ V+ S KS
Sbjct: 181 VENNVLLIKGNVPGANK-SFVTVKTSVKS 208


>gi|167974870|ref|ZP_02557147.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|188997728|gb|EDU66825.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
          Length = 214

 Score =  119 bits (297), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 107/195 (54%), Gaps = 10/195 (5%)

Query: 21  RRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKL 80
           + +  TV++++  +V+  +T +K+GY A+Q+G    K K ++KP+ G F   N  PK+ +
Sbjct: 1   KAVAATVIYVEPNKVLAVKTNEKDGYNAIQIGYETVKEKALNKPLLGQFKKANSDPKRHI 60

Query: 81  FEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSI 140
            EFR    D +  VG+  + S F  GQLV+    T G GF+G++KRHNF      HG   
Sbjct: 61  KEFR----DVVAEVGAELTVSEFEPGQLVNAQAYTKGHGFTGSIKRHNFSMGPMGHGAGY 116

Query: 141 SHRSHGST----GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP 196
            HR  GS     G  Q   RVFK  K+ G  G   VT KNL V+ V     LIL+KG +P
Sbjct: 117 PHRYVGSIAKGRGGSQAQ-RVFKGTKLPGHYGHELVTTKNLLVLDVKANENLILIKGAIP 175

Query: 197 GAKKNSWILVRDSFK 211
           G  K S +L++ + K
Sbjct: 176 GP-KGSIVLLKSAKK 189


>gi|254556017|ref|YP_003062434.1| 50S ribosomal protein L3 [Lactobacillus plantarum JDM1]
 gi|254044944|gb|ACT61737.1| 50S ribosomal protein L3 [Lactobacillus plantarum JDM1]
          Length = 209

 Score =  118 bits (296), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 118/209 (56%), Gaps = 5/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V+   G  +PVTV+ +    V+  +T++ +GY A+Q+G  + +    +K
Sbjct: 5   GILGQKVGMTQVFTESGELVPVTVVEVQPNVVLQVKTVENDGYEAIQLGVDDKREVLTNK 64

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G  +    +PK+ + E R  +  D   VG       F  G  VDVTG+T G G+ G 
Sbjct: 65  PAQGHAAKAKTTPKRFIREIRNVELGDYT-VGDEVKADIFAAGDAVDVTGITKGHGYQGN 123

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           + +         HG S  HR  GS G   +  RVFK KK+ GRMG ++ T++NL++V  D
Sbjct: 124 IHKDGQSRGPMAHG-SRYHRRPGSMGAIIN--RVFKGKKLPGRMGNHQRTMQNLQIVRAD 180

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  ++L+KG VPGA K S++ V+ S KS
Sbjct: 181 VENNVLLIKGNVPGANK-SFVTVKTSVKS 208


>gi|224045473|ref|XP_002196500.1| PREDICTED: mitochondrial ribosomal protein L3 [Taeniopygia guttata]
          Length = 501

 Score =  118 bits (296), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/211 (36%), Positives = 113/211 (53%), Gaps = 5/211 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R GVVA KLGM  ++   G +  VT+L + +C V+ + + +++G    ++  G   V  
Sbjct: 249 IRVGVVAVKLGMMPIWTKSGEKHAVTLLKVQDCHVLRYVSKEESGAKTAKLLVGGKNVSP 308

Query: 61  VSKPMRG--FFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
            SKP      F    V  K+K+  F V  DD ++  G+    ++F  GQ VDVT  TIGK
Sbjct: 309 FSKPESAHEIFKEAGVPRKQKVTTFNVT-DDAIIKPGTPLYAAHFRPGQFVDVTAKTIGK 367

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G MKR  F G  A+HG + +HR  G+    +   +V++ KKM G+MG    T   L+
Sbjct: 368 GFQGVMKRWGFKGQPASHGQTKTHRRPGAISTNKA-AKVYRGKKMPGKMGNIYRTSFGLK 426

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           V  ++ K  +I V G VPG   N  + VRDS
Sbjct: 427 VWRINTKHDIIYVNGSVPG-HTNCLVKVRDS 456


>gi|62857890|ref|NP_001016594.1| mitochondrial ribosomal protein L3 [Xenopus (Silurana) tropicalis]
 gi|89272068|emb|CAJ81305.1| mitochondrial ribosomal protein L3 [Xenopus (Silurana) tropicalis]
 gi|134024406|gb|AAI35276.1| mitochondrial ribosomal protein L3 [Xenopus (Silurana) tropicalis]
          Length = 341

 Score =  118 bits (296), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 102/198 (51%), Gaps = 4/198 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R GV+A KLGM  ++   G R  VT+L + +C VV +   ++       +  G   V   
Sbjct: 91  RVGVIAVKLGMMPIWTKSGDRHAVTMLQVRDCHVVKYTPKEEFDGKTASLTVGGKNVSPF 150

Query: 62  SKPMRG--FFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            KP      +    V PK+K+  F+V  D+ +L  G+    ++F  GQ VD+T  TIGKG
Sbjct: 151 YKPESAMELYREAGVPPKQKISIFKVS-DNAILKPGTPLYAAHFRPGQFVDITAKTIGKG 209

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR  + G  A+HG + +HR  G+     DP RVF   KM GRMG    T   L+V
Sbjct: 210 FQGVMKRWGYKGQPASHGQTKTHRRPGAISS-GDPARVFPGTKMPGRMGNVYRTSYALKV 268

Query: 180 VSVDDKRGLILVKGCVPG 197
             V+ K  +I V G VPG
Sbjct: 269 WRVNTKHNIIYVNGSVPG 286


>gi|296228096|ref|XP_002759663.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like isoform 2
           [Callithrix jacchus]
          Length = 348

 Score =  118 bits (296), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 9/212 (4%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59
           R G+VA KLGM  ++  +G+R  VT+L + +C V+ + + +  +G MA + VG       
Sbjct: 96  RVGLVAVKLGMMPLWTKDGQRHVVTLLQVRDCHVLKYISKENHDGKMAALSVGGKTVSRF 155

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           + S  +  F+  + + PK+K+  FR+  +  L P G+    ++F  GQ VDVT  TIGKG
Sbjct: 156 HKSTQILEFYRELGLPPKQKVKIFRITDNAALKP-GTPLYAAHFRPGQYVDVTAKTIGKG 214

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           F G MKR  F G  ATHG + +HR  G  STG   D  RV+   K+ G+MG    TV  L
Sbjct: 215 FQGVMKRWGFKGQPATHGQTKTHRRPGAISTG---DVARVWPGTKLPGQMGNIDRTVHGL 271

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +V  ++ K  +I V G VPG  KN  + VRDS
Sbjct: 272 KVWRINTKHNIIYVNGSVPG-HKNCLVKVRDS 302


>gi|206896345|ref|YP_002247334.1| ribosomal protein L3 [Coprothermobacter proteolyticus DSM 5265]
 gi|206738962|gb|ACI18040.1| ribosomal protein L3 [Coprothermobacter proteolyticus DSM 5265]
          Length = 219

 Score =  118 bits (296), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/208 (37%), Positives = 115/208 (55%), Gaps = 3/208 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GM+   + +G  IPVT++       VV+   D  G  +V +G    K K ++K
Sbjct: 5   GLLGKKIGMSRFIDEKGVFIPVTLIKA-GPNYVVNVKKDSKGRESVALGFEVVKEKALNK 63

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG-SVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P  G      V P + + EFR     +   VG  V     F  G+LVDV G + G+GF+G
Sbjct: 64  PQLGVLKKAGVPPVRFVREFRYPGISEKFEVGQEVNVADVFADGELVDVIGTSKGRGFAG 123

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKR  F G   THG    HR  G+ G R  PG V   KKM+G  G ++VTV+NL++V V
Sbjct: 124 AMKRWGFAGGPKTHGTRGWHRRVGAIGNRTYPGEVKPGKKMSGHYGNSQVTVRNLKIVKV 183

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSF 210
             ++ +I VKG VPG+ +N ++ +R ++
Sbjct: 184 IPEQNIIAVKGSVPGS-RNGFVCIRKAY 210


>gi|296228094|ref|XP_002759662.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like isoform 1
           [Callithrix jacchus]
          Length = 376

 Score =  118 bits (296), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 9/212 (4%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59
           R G+VA KLGM  ++  +G+R  VT+L + +C V+ + + +  +G MA + VG       
Sbjct: 124 RVGLVAVKLGMMPLWTKDGQRHVVTLLQVRDCHVLKYISKENHDGKMAALSVGGKTVSRF 183

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           + S  +  F+  + + PK+K+  FR+  +  L P G+    ++F  GQ VDVT  TIGKG
Sbjct: 184 HKSTQILEFYRELGLPPKQKVKIFRITDNAALKP-GTPLYAAHFRPGQYVDVTAKTIGKG 242

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           F G MKR  F G  ATHG + +HR  G  STG   D  RV+   K+ G+MG    TV  L
Sbjct: 243 FQGVMKRWGFKGQPATHGQTKTHRRPGAISTG---DVARVWPGTKLPGQMGNIDRTVHGL 299

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +V  ++ K  +I V G VPG  KN  + VRDS
Sbjct: 300 KVWRINTKHNIIYVNGSVPG-HKNCLVKVRDS 330


>gi|291533621|emb|CBL06734.1| 50S ribosomal protein L3, bacterial [Megamonas hypermegale ART12/1]
          Length = 149

 Score =  117 bits (294), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 72/149 (48%), Positives = 90/149 (60%), Gaps = 5/149 (3%)

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M+G F+   V P K + E R+  D      G   S   F  G LVDVTG + GKGF+G +
Sbjct: 1   MKGHFAKAGVEPVKFIRELRLA-DVPEYKAGDSISVDIFGAGDLVDVTGTSKGKGFAGGI 59

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           KRHNF      HG S SHR  GSTG       GRV K KK+ GRMGG +VTV+ L VV V
Sbjct: 60  KRHNFARGPMGHG-SKSHREPGSTGAMISGHGGRVLKGKKLPGRMGGAKVTVQRLSVVRV 118

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D  R LIL+KG +PGA KNS+++++D+ K
Sbjct: 119 DADRNLILIKGAIPGA-KNSFVVIKDTVK 146


>gi|332178455|gb|AEE14144.1| 50S ribosomal protein L3 [Thermodesulfobium narugense DSM 14796]
          Length = 208

 Score =  117 bits (294), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 77/206 (37%), Positives = 116/206 (56%), Gaps = 7/206 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V +K+GMT      G  IPVTV+      V   RT++K+GY A++V   E   + 
Sbjct: 4   MFMGLVGKKIGMTSYITPSGV-IPVTVVQAIKGTVADKRTIEKDGYEAIRVAFQECSERK 62

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP  G F   ++ P KK+ EF+    +  L VG     S F+VG  ++VTG+T G G 
Sbjct: 63  INKPELGLFKKASIKPHKKIVEFQ----NSNLNVGDTLDISMFSVGDSINVTGITRGFGT 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR  F     +HG S + R  GSTG      ++ K KKM G MG  + TVKN+ VV
Sbjct: 119 AGTIKRWKFQRGPMSHG-SKNIRKIGSTGVGTGMSKIIKGKKMPGHMGNVKRTVKNISVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
            +  +  L+++KG +PG  KNS++++
Sbjct: 178 DLMPEDYLVILKGSIPG-HKNSFVIL 202


>gi|327274961|ref|XP_003222243.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like [Anolis
           carolinensis]
          Length = 329

 Score =  117 bits (294), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 119/220 (54%), Gaps = 7/220 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG--YMAVQVGAGEAKVK 59
           R G++A KLGM  ++  +G ++ VT+L + +C V+ H   +++   Y A+ VGA      
Sbjct: 78  RVGIIAVKLGMMPLWTKKGEKLAVTLLQVQDCHVIRHIPKEESDGKYPALIVGAKNVSQF 137

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             S  +   + +V +  K+K+  FRV ++  + P G+    ++F  GQ VDVT  TIGKG
Sbjct: 138 QKSVSILEMYRAVGLPVKQKISTFRVTENAIIKP-GTPLYAAHFRPGQYVDVTAKTIGKG 196

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR  F G  A+HG + +HR  G+        +VFK KKM G++G    T K L+V
Sbjct: 197 FQGVMKRWGFKGQPASHGQTKTHRRPGAIS-NSKVAKVFKGKKMPGQLGNWYRTTKGLKV 255

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV--NCK 217
             V  K  +I V G VPG  +N  + V DS   A   +CK
Sbjct: 256 WRVSTKFNVIYVHGSVPG-HRNCLVKVSDSSLPAYREDCK 294


>gi|12045004|ref|NP_072814.1| 50S ribosomal protein L3 [Mycoplasma genitalium G37]
 gi|1350743|sp|P47397|RL3_MYCGE RecName: Full=50S ribosomal protein L3
 gi|3844745|gb|AAC71369.1| ribosomal protein L3 [Mycoplasma genitalium G37]
 gi|166078974|gb|ABY79592.1| ribosomal protein L3 [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 257

 Score =  117 bits (294), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 109/200 (54%), Gaps = 7/200 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+   K+GM+ ++  +   +P+T+++ +  QV   +T+ K+ Y A  +       K ++K
Sbjct: 5   GIFGVKVGMSQIFTEQNECLPITIVYCEANQVAGIKTIAKDNYNATLLSFQTVDEKQLNK 64

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSG 122
           P +GFFS + + P K L E R  +  +L   G   +P   F +G+ VDVT +T G+GF+G
Sbjct: 65  PKQGFFSKLKLEPHKYLREIRKMQGFEL---GKKITPQELFKIGEYVDVTSLTKGRGFTG 121

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQ---DPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           A+KR NF      HG    HR  GS    +      RVFK KKM+G  G  +VT++NL +
Sbjct: 122 AIKRWNFKIGPLGHGAGYPHRFQGSVQAGRGGSSAQRVFKGKKMSGHYGHEQVTIQNLFI 181

Query: 180 VSVDDKRGLILVKGCVPGAK 199
           V  D+   L+LV G + G +
Sbjct: 182 VGFDEINKLVLVSGAIAGPE 201


>gi|126341656|ref|XP_001379787.1| PREDICTED: similar to Mitochondrial ribosomal protein L3
           [Monodelphis domestica]
          Length = 448

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 114/211 (54%), Gaps = 5/211 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK--NGYMAVQVGAGEAKV 58
           +R G++A KLGM  ++  +G++  VT+L + +C V+ +   ++      A+ VG      
Sbjct: 194 VRVGLIAAKLGMMPLWTKDGKKFVVTLLQVQDCHVLKYTPKEECNRNRGALIVGGKNVSP 253

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
              S+ +   +  V V PK+K   FRV  D+ ++  G+    ++F  GQ VDVT  TIGK
Sbjct: 254 FYKSESLMQMYREVGVPPKQKFSTFRVT-DNAIIKPGTPLYAAHFRPGQYVDVTAKTIGK 312

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G MKR  F G  A+HG + +HR  G+     D  RV+  KKM G+MG    T   L+
Sbjct: 313 GFQGVMKRWGFKGQPASHGQTKTHRRPGAIAT-GDIARVWPGKKMPGKMGNRYRTEFGLK 371

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           V  ++ K  +I V G VPG  +N  + +RDS
Sbjct: 372 VWRINTKHDIIYVNGSVPG-HRNCLVKIRDS 401


>gi|54020070|ref|YP_115700.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae 232]
 gi|81823546|sp|Q601L5|RL3_MYCH2 RecName: Full=50S ribosomal protein L3
 gi|53987243|gb|AAV27444.1| 50s ribosomal protein L3 [Mycoplasma hyopneumoniae 232]
          Length = 230

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 120/220 (54%), Gaps = 7/220 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GM+ ++  EG  I V+++ +    V    T +KN Y A+Q+ A + K     K
Sbjct: 3   GILGKKVGMSQLFTTEGIAISVSIIEVPENIVTKIITKEKNSYNAIQLAAFDKKQSRFLK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+  N  PK+ + EFR   D     +G     S F+ G+ VDVTG + GKGF+G 
Sbjct: 63  PEIGHFAKANTKPKRFIKEFR---DFQGYKLGQTVDVSIFSPGEFVDVTGTSKGKGFAGT 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181
           +KR+N      +HG     +    TG   D    +V K   M GR+G  +VT ++LE++ 
Sbjct: 120 IKRYNQAIGPRSHGGGGGSKPIRQTGSLGDISGNKVVKGMTMPGRLGHEKVTKQSLEIIK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
           VD +  L+++KG VPG KK S+++++ + K   N K  VS
Sbjct: 180 VDKENNLLVLKGSVPGPKK-SFLVIKSAIKKP-NPKNPVS 217


>gi|24213439|ref|NP_710920.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Lai str.
           56601]
 gi|45658703|ref|YP_002789.1| 50S ribosomal protein L3 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|26454655|sp|Q9XD36|RL3_LEPIN RecName: Full=50S ribosomal protein L3
 gi|73917494|sp|Q72NG1|RL3_LEPIC RecName: Full=50S ribosomal protein L3
 gi|24194209|gb|AAN47938.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Lai str.
           56601]
 gi|45601947|gb|AAS71426.1| 50S ribosomal protein L3 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 206

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 110/198 (55%), Gaps = 4/198 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GM+ +++ +G  IPVTVL +  C V   ++++ +GY A+Q+   + K   
Sbjct: 1   MAKGLIGKKVGMSQIFDEQGNIIPVTVLEVGPCAVSQVKSVENDGYEAIQLAFQDIKEIQ 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKG 119
            SK  +   +   + PKK L EFR   D      GSV      F V  +V VTG++ G+G
Sbjct: 61  TSKAEKNHLAKAGLGPKKVLKEFRSFGDSPT--AGSVLKIQDVFAVSDVVKVTGVSKGRG 118

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           + G +KRH   G    H  S  HR  GS G    P RVFK  K+ GR G  + TV+NL+V
Sbjct: 119 YQGVVKRHGHAGGPGAH-GSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQKTTVRNLKV 177

Query: 180 VSVDDKRGLILVKGCVPG 197
           V +++++ L+ V G VPG
Sbjct: 178 VRINEEKNLLFVSGAVPG 195


>gi|330718972|ref|ZP_08313572.1| 50S ribosomal protein L3 [Leuconostoc fallax KCTC 3537]
          Length = 226

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/217 (37%), Positives = 116/217 (53%), Gaps = 8/217 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  I VT +      V+  +  + +GY AVQ+G  + +   
Sbjct: 1   MTKGILGRKVGMTQVFTETGELIAVTAVEATPNVVLQLKNAETDGYSAVQLGYQDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G     N +PK+ + E R  + +    VG       F  G  VDVTG+T G GF
Sbjct: 61  SNKPEQGHAKKANTTPKRYIREIRDAEGE--FNVGDEIKVDTFQAGDYVDVTGITKGHGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR         HG S  HR  GS G   +  RVFK K + GRMG N+ T++N+ +V
Sbjct: 119 QGAIKRLGQSRGPMAHG-SRYHRRPGSMGAIIN--RVFKGKLLPGRMGNNKRTMQNVAIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
            VD +  L+L+KG VPGA K S + ++ + K  VN K
Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTIKSTVK--VNAK 209


>gi|326692237|ref|ZP_08229242.1| 50S ribosomal protein L3 [Leuconostoc argentinum KCTC 3773]
          Length = 228

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/217 (36%), Positives = 119/217 (54%), Gaps = 8/217 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  I VTV+      V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGRKVGMTQVFTETGELIAVTVVEATPNVVLQVKTVETDGYDAVQLGYQDKRAVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  S  N +PK+ + E R  + +     G       F  G+ VDVTG+T G GF
Sbjct: 61  SNKPEQGHASKANTTPKRYVREIRNAEGE--FNAGDEIKVDTFAAGEYVDVTGITKGHGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +K+         HG S  HR  GS G   +  RVFK K + GRMG ++ T++N+ +V
Sbjct: 119 QGNIKKDGQSRGPMAHG-SRYHRRPGSMGAIIN--RVFKGKLLPGRMGNHKRTMQNVAIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
            VD +  L+L+KG VPGA K S + ++ + K  VN K
Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTIKSTVK--VNAK 209


>gi|300812343|ref|ZP_07092778.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496648|gb|EFK31735.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 209

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/213 (37%), Positives = 121/213 (56%), Gaps = 5/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  +PVTV+      V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGRKVGMTQIFTKDGVLVPVTVIEATPNVVMQVKTVENDGYEAVQLGYQDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G       SPK+ + E R  +  D   VGS  +   F  G +V+VTG + G G+
Sbjct: 61  SNKPEKGHADKAKTSPKRFIRELRGVELSD-YEVGSETTVETFKEGDVVNVTGTSRGHGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH+      THG S  HR  GS G   +  RV K KK+ G MG   VT++NL V 
Sbjct: 120 QGNIKRHHQSRGPETHG-SRYHRIPGSMGSIIN--RVPKGKKLPGHMGVKTVTIENLVVE 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V   + ++++KG VPGA KNS I+V+ S K++
Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIIVKSSAKAS 208


>gi|104773542|ref|YP_618522.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116513539|ref|YP_812445.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|122275691|sp|Q04C15|RL3_LACDB RecName: Full=50S ribosomal protein L3
 gi|122984010|sp|Q1GBL8|RL3_LACDA RecName: Full=50S ribosomal protein L3
 gi|103422623|emb|CAI97231.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116092854|gb|ABJ58007.1| LSU ribosomal protein L3P [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|325125175|gb|ADY84505.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
 gi|325684720|gb|EGD26874.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 209

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/213 (37%), Positives = 121/213 (56%), Gaps = 5/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  +PVTV+      V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGRKVGMTQIFTKDGVLVPVTVIEATPNVVMQVKTVENDGYEAVQLGYQDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G       SPK+ + E R  +  D   VGS  +   F  G +V+VTG + G G+
Sbjct: 61  SNKPEKGHADKAKTSPKRFIRELRGVELSD-YEVGSEVTVETFKEGDVVNVTGTSRGHGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH+      THG S  HR  GS G   +  RV K KK+ G MG   VT++NL V 
Sbjct: 120 QGNIKRHHQSRGPETHG-SRYHRIPGSMGSIIN--RVPKGKKLPGHMGVKTVTIENLVVE 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V   + ++++KG VPGA KNS I+V+ S K++
Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIVVKSSAKAS 208


>gi|73990569|ref|XP_534263.2| PREDICTED: similar to Mitochondrial 39S ribosomal protein L3 (L3mt)
           (MRP-L3) [Canis familiaris]
          Length = 456

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 117/212 (55%), Gaps = 9/212 (4%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59
           R G++A KLGM  ++  +G+R  VT+L + +C V+ +   +  NG MA + VG       
Sbjct: 204 RVGLIALKLGMMPLWTKDGKRHVVTLLQVQDCHVLKYTPKENHNGKMAALTVGGKTVSRF 263

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           + S  +  F+  + + PK+K+  F V  D+ ++  G+    ++F  GQ VDVT  TIGKG
Sbjct: 264 HKSTSVLEFYQELGLPPKQKVKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 322

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           F G MKR  F G  ATHG + +HR  G  STG   D  RV+   KM G+MG    T   L
Sbjct: 323 FQGVMKRWGFKGQPATHGQTKTHRRPGAISTG---DVARVWPGTKMPGQMGNKDRTEYGL 379

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +V  ++ K  +I V G VPG  +N  + +RDS
Sbjct: 380 KVWRINTKNNIIYVNGSVPG-HRNCLVKIRDS 410


>gi|15829060|ref|NP_326420.1| 50S ribosomal protein L3 [Mycoplasma pulmonis UAB CTIP]
 gi|42559684|sp|Q98PY0|RL3_MYCPU RecName: Full=50S ribosomal protein L3
 gi|14090004|emb|CAC13762.1| 50S RIBOSOMAL PROTEIN L3 [Mycoplasma pulmonis]
          Length = 266

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 117/210 (55%), Gaps = 6/210 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT +++  G  IPVT++ +    V    T +KNGY A+Q+   + K     K
Sbjct: 3   GILGRKVGMTQIFSDNGIVIPVTLIEVKPNIVSNVLTDEKNGYKAIQLSLEDKKKSRQRK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+  N +PK+ + E R   D     +GS    S FT G+ VDVTG++ GKGF+G 
Sbjct: 63  PEIGHFAKANTTPKRFVKEIR---DMQGFELGSNVDVSIFTPGEFVDVTGISKGKGFAGT 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181
           +KRHN      +HG     +    TG   D    +V K   M G +G  +VT++NLEV+ 
Sbjct: 120 IKRHNQKIGPKSHGGGGGSKPVRQTGSLGDISGNKVVKGMTMPGHLGHEQVTIQNLEVIM 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            D K  ++LVKG VPG KK  ++++++  K
Sbjct: 180 TDVKNNILLVKGAVPGPKK-GFVVIKECAK 208


>gi|51244976|ref|YP_064860.1| 50S ribosomal protein L3 [Desulfotalea psychrophila LSv54]
 gi|81826871|sp|Q6AP71|RL3_DESPS RecName: Full=50S ribosomal protein L3
 gi|50876013|emb|CAG35853.1| probable 50S ribosomal protein L3 [Desulfotalea psychrophila LSv54]
          Length = 209

 Score =  117 bits (292), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/197 (41%), Positives = 109/197 (55%), Gaps = 3/197 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ + +GMT VY   G+ IPVTV+    C+V+  +T   +GY AVQVG    K   V+K
Sbjct: 6   GILGKNIGMTRVYGEVGQAIPVTVVQAGPCKVLQVKTNATDGYNAVQVGFENKKSSRVNK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKGFSG 122
              G F+  +      + EFRV  D     VG + S  + F  G +VDV G + G+GF G
Sbjct: 66  AEAGHFAKSDSEGFYFVREFRVV-DPATYNVGDMISVDALFKAGDIVDVQGTSKGRGFQG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR  F G    H  S  HR+ GS GC   PGRV K KKM GRMG + V  KN+ VV V
Sbjct: 125 VIKRWGFKGGPGGH-GSKHHRAPGSIGCSAYPGRVVKGKKMPGRMGNDTVLKKNVTVVDV 183

Query: 183 DDKRGLILVKGCVPGAK 199
                ++L+KG +PGAK
Sbjct: 184 RIDENVVLLKGPMPGAK 200


>gi|291411673|ref|XP_002722112.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like
           [Oryctolagus cuniculus]
          Length = 348

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 116/212 (54%), Gaps = 9/212 (4%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59
           R G++A KLGM  ++  +G R  VT+L + +C V+ + + +  NG MA + VG       
Sbjct: 96  RVGLIALKLGMMPLWTKDGHRHVVTLLQVQDCHVLKYTSKENHNGKMAALTVGGKTVSRF 155

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             S  +  F+  + + PK+K+  F V  D+ ++  G+    ++F  GQ VDVT  TIGKG
Sbjct: 156 RKSTSVLEFYQELGLPPKQKVKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTARTIGKG 214

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           F G MKR  F G  ATHG + +HR  G  STG   D  RV+   KM G+MG    T   L
Sbjct: 215 FQGVMKRWGFKGQPATHGQTKTHRRPGAISTG---DVARVWPGTKMPGQMGNIDRTAYGL 271

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +V  ++ K  +I V G VPG  KN  + V+DS
Sbjct: 272 KVWRINTKHNIIYVNGSVPG-HKNCLVKVKDS 302


>gi|238855068|ref|ZP_04645396.1| 50S ribosomal protein L3 [Lactobacillus jensenii 269-3]
 gi|256852036|ref|ZP_05557423.1| 50S ribosomal protein L3 [Lactobacillus jensenii 27-2-CHN]
 gi|260661395|ref|ZP_05862308.1| 50S ribosomal protein L3 [Lactobacillus jensenii 115-3-CHN]
 gi|260664853|ref|ZP_05865704.1| 50S ribosomal protein L3 [Lactobacillus jensenii SJ-7A-US]
 gi|282933636|ref|ZP_06339001.1| 50S ribosomal protein L3 [Lactobacillus jensenii 208-1]
 gi|282934051|ref|ZP_06339333.1| 50S ribosomal protein L3 [Lactobacillus jensenii 208-1]
 gi|297205089|ref|ZP_06922485.1| 50S ribosomal protein L3 [Lactobacillus jensenii JV-V16]
 gi|313472595|ref|ZP_07813084.1| 50S ribosomal protein L3 [Lactobacillus jensenii 1153]
 gi|238832312|gb|EEQ24621.1| 50S ribosomal protein L3 [Lactobacillus jensenii 269-3]
 gi|256615448|gb|EEU20638.1| 50S ribosomal protein L3 [Lactobacillus jensenii 27-2-CHN]
 gi|260547850|gb|EEX23827.1| 50S ribosomal protein L3 [Lactobacillus jensenii 115-3-CHN]
 gi|260561336|gb|EEX27309.1| 50S ribosomal protein L3 [Lactobacillus jensenii SJ-7A-US]
 gi|281301883|gb|EFA94145.1| 50S ribosomal protein L3 [Lactobacillus jensenii 208-1]
 gi|281302241|gb|EFA94478.1| 50S ribosomal protein L3 [Lactobacillus jensenii 208-1]
 gi|297149667|gb|EFH29964.1| 50S ribosomal protein L3 [Lactobacillus jensenii JV-V16]
 gi|313448952|gb|EFR61270.1| 50S ribosomal protein L3 [Lactobacillus jensenii 1153]
          Length = 209

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/213 (38%), Positives = 120/213 (56%), Gaps = 7/213 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  +PVTV+      V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGRKVGMTQIFTDKGVLVPVTVIEATPNVVMQVKTVESDGYEAVQLGYQDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFR-VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            +KP +G       SPK+ + E R V+  D    VGS  +   F  G +VDVTG T G G
Sbjct: 61  SNKPEKGHADKAKTSPKRFIREIRGVELKD--YEVGSEVTVDTFKEGDVVDVTGTTRGHG 118

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           + G +KRH       THG S  HR  GS G   +  RV K KK+ G MG   VT++NL +
Sbjct: 119 YQGNIKRHGQSRGPETHG-SRYHRIPGSMGSIIN--RVPKGKKLPGHMGVKTVTIQNLVI 175

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
             V   + ++LVKG VPGA K+S I+V+ + K+
Sbjct: 176 EKVVADKNVLLVKGNVPGA-KDSLIVVKSATKA 207


>gi|301633145|gb|ADK86699.1| 50S ribosomal protein L3 [Mycoplasma pneumoniae FH]
          Length = 287

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 107/200 (53%), Gaps = 7/200 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+   K+GM+ V+     R+P+TV++ +  QV   +   K+ Y A  +     + K ++K
Sbjct: 5   GIFGVKVGMSQVFTTNNERLPITVIYCEPNQVAGVKNEAKDKYSATLLSFDTVENKKLNK 64

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSG 122
           P +GFF   N+ P K L E R     ++   G   +P + F VG+ VDV+ ++ G+GF+G
Sbjct: 65  PQQGFFEKNNLKPTKHLQEIRNMTGFEM---GQQITPQNLFQVGEYVDVSAISKGRGFTG 121

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQ---DPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           A+KR NF      HG    HR  GS    +      RVFK KKM+G  G  +VTV+NL +
Sbjct: 122 AIKRWNFKIGPLGHGAGYPHRFQGSVQAGRGGASAQRVFKGKKMSGHYGHEKVTVQNLRI 181

Query: 180 VSVDDKRGLILVKGCVPGAK 199
           V  D+   L+LV G + G +
Sbjct: 182 VGFDEANMLVLVSGAIAGPE 201


>gi|5163204|gb|AAD40583.1|AF115283_2 ribosomal protein L3 [Leptospira interrogans]
          Length = 206

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 110/198 (55%), Gaps = 4/198 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GM+ +++ +G  IPVTVL +  C V   ++++ +GY A+Q+   + K   
Sbjct: 1   MAKGLIGKKVGMSQIFDEQGNIIPVTVLEVGPCAVSQVKSVENDGYEAIQLAFQDIKEIQ 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKG 119
            SK  +   +   + PKK L EFR   D      G+V      F V  +V VTG++ G+G
Sbjct: 61  TSKAEKNHLAKAGLGPKKVLKEFRSFGDSPT--AGAVLKIQDVFAVSDVVKVTGVSKGRG 118

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           + G +KRH   G    H  S  HR  GS G    P RVFK  K+ GR G  + TV+NL+V
Sbjct: 119 YQGVVKRHGHAGGPGAH-GSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQKTTVRNLKV 177

Query: 180 VSVDDKRGLILVKGCVPG 197
           V +++++ L+ V G VPG
Sbjct: 178 VRINEEKNLLFVSGAVPG 195


>gi|217073974|gb|ACJ85347.1| unknown [Medicago truncatula]
          Length = 224

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/168 (41%), Positives = 88/168 (52%), Gaps = 2/168 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVKNVS 62
           GV+  KLGM   +   G  +PVTV+      +V     D  +GY AVQVG    + + ++
Sbjct: 58  GVMGTKLGMMSFFQPNGEVVPVTVVGFKEGNIVTQIKADATDGYNAVQVGYRRVRDRKLT 117

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G        P + L EFR+Q  D   P   +     F  G LVDV+G TIGKGF G
Sbjct: 118 KPEMGHLEKAGAIPMRHLQEFRLQSVDGFEPNQRLVFDELFNEGDLVDVSGTTIGKGFQG 177

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
            +KRHNF     +HG S SHR  GS G    PGRV+K KKM G+ G N
Sbjct: 178 GIKRHNFKRGPMSHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGKDGWN 224


>gi|297581436|ref|ZP_06943359.1| ribosomal protein L3 [Vibrio cholerae RC385]
 gi|297534274|gb|EFH73112.1| ribosomal protein L3 [Vibrio cholerae RC385]
          Length = 124

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/125 (50%), Positives = 82/125 (65%), Gaps = 1/125 (0%)

Query: 88  DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGS 147
           + +   VGS  +   F   + VDVTG + GKGF GA+KR NF     THG S+SHR+ GS
Sbjct: 1   NGEEFAVGSELTVELFNEVKKVDVTGTSKGKGFQGAVKRWNFRTQDMTHGNSLSHRAPGS 60

Query: 148 TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVR 207
            G  Q PGRVFK KKMAG MG  RVT +NLE+V VD +R L+L+KG VPGA   + ++V+
Sbjct: 61  IGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVDAERNLLLIKGAVPGATGGN-VIVK 119

Query: 208 DSFKS 212
            + K+
Sbjct: 120 PAVKA 124


>gi|296111429|ref|YP_003621811.1| ribosomal protein L3 [Leuconostoc kimchii IMSNU 11154]
 gi|295832961|gb|ADG40842.1| ribosomal protein L3 [Leuconostoc kimchii IMSNU 11154]
          Length = 227

 Score =  116 bits (290), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/212 (35%), Positives = 116/212 (54%), Gaps = 6/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  I VTV+      V+  +  + +GY A+Q+G  + +   
Sbjct: 1   MTKGILGRKVGMTQVFTETGELIAVTVVEATPNVVLQVKNAETDGYSALQLGYQDKRAVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  S  N +PK+ + E R  + +     G       F  G+ VDVTG+T G GF
Sbjct: 61  SNKPEQGHASKANTTPKRYIREIRNAEGE--FNAGDEIKVDTFESGEYVDVTGITKGHGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +K+        +HG S  HR  GS G   +  RVFK K + GRMG N+ T++N+ +V
Sbjct: 119 QGNIKKDGQSRGPMSHG-SRYHRRPGSMGAVIN--RVFKGKLLPGRMGNNKRTMQNVAIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  L+L+KG VPGA K S + ++ + K+
Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTIKSTVKT 206


>gi|223983921|ref|ZP_03634081.1| hypothetical protein HOLDEFILI_01362 [Holdemania filiformis DSM
           12042]
 gi|223964113|gb|EEF68465.1| hypothetical protein HOLDEFILI_01362 [Holdemania filiformis DSM
           12042]
          Length = 230

 Score =  115 bits (289), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 125/221 (56%), Gaps = 5/221 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT V+  +G  IPVTV+      V+  +TL+ +GY AVQ+G  +   K  +K
Sbjct: 3   GILGRKLGMTQVFTTDGVLIPVTVVEALPNVVLQKKTLENDGYEAVQLGFEDLSEKGSNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
             +G  +  + + K+ + E R  +  + L VG+      F  G++VDVTG + G+G++G 
Sbjct: 63  AEKGHAAKASTAAKRFVREIRGTEMTN-LEVGNEVKVDLFAAGEIVDVTGTSKGRGYNGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCR-QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           + R+N      THG S + R  GS     ++ GR+ K    AG+ GG   T +NLE++ V
Sbjct: 122 IVRNNATMGPKTHGGSKNMRHIGSLATTGRNNGRIEKGTAGAGQEGGYTTTTQNLEIIKV 181

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK--SAVNCKGKVS 221
           D +   +L+KG VPG K+   ++V+ S K  +AV+ K  +S
Sbjct: 182 DVENNYMLIKGNVPGPKR-GLVVVKSSVKGTAAVSAKDLIS 221


>gi|193216762|ref|YP_002000004.1| 50S ribosomal protein L3 [Mycoplasma arthritidis 158L3-1]
 gi|226730537|sp|B3PMP8|RL3_MYCA5 RecName: Full=50S ribosomal protein L3
 gi|193002085|gb|ACF07300.1| ribosomal protein L3 [Mycoplasma arthritidis 158L3-1]
          Length = 272

 Score =  115 bits (289), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 114/212 (53%), Gaps = 6/212 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT ++  EG  IPVT++ +    V    T++K+GY A Q+   + K   + +
Sbjct: 3   GILGRKVGMTQLFTNEGILIPVTIVEVKPNVVTKVLTVEKDGYSATQLATEDKKASQIRR 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P    F   N +PK+ + E R      L   G     S F  G++VDVT ++ GKGF+G 
Sbjct: 63  PEINKFKQANTTPKRFVKEIRNMTGYSL---GDTIDASLFQAGEIVDVTAISKGKGFAGT 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181
           +KR N      +HG     +    TG   D    RV+K   M G +G  +VT++NLE+V 
Sbjct: 120 IKRWNQHIGPKSHGGGGGSQPLRQTGSIGDISGNRVWKGMTMPGHLGSEQVTIQNLEIVK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D    ++++KG +PGA K + ++++ + K++
Sbjct: 180 EDPANNMLVIKGSIPGA-KGALVVIKKAIKTS 210


>gi|293402501|ref|ZP_06646636.1| 50S ribosomal protein L3 [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291304015|gb|EFE45269.1| 50S ribosomal protein L3 [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 241

 Score =  115 bits (289), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 109/199 (54%), Gaps = 6/199 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT V+  EG  IPVTV+      V+  +T++ +GY AVQ+G  + K    +K
Sbjct: 17  GILGRKLGMTQVFTEEGTLIPVTVVEATPNVVLQKKTVENDGYEAVQLGFEDVKETRSTK 76

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G  +  N +PK+   E R  + D  + +G       F  G+ VDV G + GKG++G 
Sbjct: 77  PSKGHAAKANTAPKRFAQEIRDCELD--VNLGDEVKVDIFAAGETVDVIGTSKGKGYNGT 134

Query: 124 MKRHNFGGLRATHGVSISHRSHGS---TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           + R+N      +HG S  HR  GS    G     G++ K   MAG+ GG R T +NL +V
Sbjct: 135 IVRNNAKIGPKSHG-SGHHRHIGSLATNGITSRQGKILKGTIMAGQEGGYRTTNQNLTIV 193

Query: 181 SVDDKRGLILVKGCVPGAK 199
            VD +   +L+KG VPG K
Sbjct: 194 KVDVENNYLLIKGNVPGPK 212


>gi|148689150|gb|EDL21097.1| mitochondrial ribosomal protein L3, isoform CRA_b [Mus musculus]
          Length = 292

 Score =  115 bits (288), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 119/224 (53%), Gaps = 13/224 (5%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRT-LDKNGYMAVQVGAGEAKVK 59
            R G++A KLGM  ++  +G++  VT+L + +C V+ +    D NG +A     G+  V 
Sbjct: 39  FRVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKIAALTVGGKT-VS 97

Query: 60  NVSKP--MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
              KP     F+  + + PK+    F V  D+ ++  G+    ++F  GQ VDVT  TIG
Sbjct: 98  RFYKPDSRLEFYRDLGLPPKQIHKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIG 156

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
           KGF G MKR  F G  A+HG + +HR  G  STG   D  RV+   KM GRMG    TV 
Sbjct: 157 KGFQGVMKRWGFKGQPASHGQTKTHRRPGAISTG---DIARVWPGTKMPGRMGNQNRTVY 213

Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV--NCK 217
            L+V  V+ K  +I V G VPG  KN  + ++DS   A   +CK
Sbjct: 214 GLKVWRVNTKHNIIYVNGSVPG-HKNCLVKIKDSTLPAYKDSCK 256


>gi|170017943|ref|YP_001728862.1| ribosomal protein L3 [Leuconostoc citreum KM20]
 gi|226730530|sp|B1MW14|RL3_LEUCK RecName: Full=50S ribosomal protein L3
 gi|169804800|gb|ACA83418.1| Ribosomal protein L3 [Leuconostoc citreum KM20]
          Length = 227

 Score =  115 bits (288), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 116/217 (53%), Gaps = 8/217 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  I VT +      V+  + +  +GY A+Q+G  + +   
Sbjct: 1   MTKGILGRKVGMTQVFTESGELIAVTAVEATPNVVLQVKNIATDGYNAIQLGYQDKRTVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  S  N +PK+ + E R  + +     G       F  G  VDVTG+T G GF
Sbjct: 61  SNKPEQGHASKANTTPKRYVREVRDAEGE--FNAGDEIKVDTFQAGDYVDVTGITKGHGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+K+         HG S  HR  GS G   +  RVFK K + GRMG N+ T++N+ +V
Sbjct: 119 QGAIKKLGQSRGPMAHG-SRYHRRPGSMGAIIN--RVFKGKLLPGRMGNNKRTMQNVAIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
            VD +  L+L+KG VPGA K S + ++ + K  VN K
Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTIKSTVK--VNAK 209


>gi|90075128|dbj|BAE87244.1| unnamed protein product [Macaca fascicularis]
          Length = 348

 Score =  115 bits (288), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
            R G++A KLGM  ++  +G +  VT+L + +C V+ + + + +      +  G   V  
Sbjct: 95  FRVGLIALKLGMMPLWTKDGEKHVVTLLQVQDCHVLKYTSKENHNGKTAALSVGGKTVSR 154

Query: 61  VSK--PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
             K  P+  F+  + + PK+ +  F +  +  + P G+    ++F  GQ VDVT  TIGK
Sbjct: 155 FRKATPVLEFYRELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGK 213

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           GF G +KR  F G  ATHG + +HR  G  STG   D GRV+   KM G+MG    T   
Sbjct: 214 GFQGVVKRWGFKGQPATHGQTKTHRRPGALSTG---DIGRVWPGTKMPGKMGNIYRTAYG 270

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           L+V  ++ K  +I V G VPG  KN  + VRDS   A    GK
Sbjct: 271 LKVWRINTKHNIIYVNGSVPG-HKNCLVKVRDSKLPAYKDLGK 312


>gi|31981470|ref|NP_444389.2| 39S ribosomal protein L3, mitochondrial [Mus musculus]
 gi|17865553|sp|Q99N95|RM03_MOUSE RecName: Full=39S ribosomal protein L3, mitochondrial; Short=L3mt;
           Short=MRP-L3
 gi|13559357|dbj|BAB40838.1| mitochondrial ribosomal protein L3 (L3mt) [Mus musculus]
 gi|22028310|gb|AAH34877.1| Mitochondrial ribosomal protein L3 [Mus musculus]
 gi|26346775|dbj|BAC37036.1| unnamed protein product [Mus musculus]
 gi|74141933|dbj|BAE41032.1| unnamed protein product [Mus musculus]
 gi|74216950|dbj|BAE26589.1| unnamed protein product [Mus musculus]
 gi|148689151|gb|EDL21098.1| mitochondrial ribosomal protein L3, isoform CRA_c [Mus musculus]
          Length = 348

 Score =  115 bits (288), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 119/224 (53%), Gaps = 13/224 (5%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRT-LDKNGYMAVQVGAGEAKVK 59
            R G++A KLGM  ++  +G++  VT+L + +C V+ +    D NG +A     G+  V 
Sbjct: 95  FRVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKIAALTVGGKT-VS 153

Query: 60  NVSKP--MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
              KP     F+  + + PK+    F V  D+ ++  G+    ++F  GQ VDVT  TIG
Sbjct: 154 RFYKPDSRLEFYRDLGLPPKQIHKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIG 212

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
           KGF G MKR  F G  A+HG + +HR  G  STG   D  RV+   KM GRMG    TV 
Sbjct: 213 KGFQGVMKRWGFKGQPASHGQTKTHRRPGAISTG---DIARVWPGTKMPGRMGNQNRTVY 269

Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV--NCK 217
            L+V  V+ K  +I V G VPG  KN  + ++DS   A   +CK
Sbjct: 270 GLKVWRVNTKHNIIYVNGSVPG-HKNCLVKIKDSTLPAYKDSCK 312


>gi|15029810|gb|AAH11128.1| Mitochondrial ribosomal protein L3 [Mus musculus]
          Length = 348

 Score =  115 bits (287), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 119/224 (53%), Gaps = 13/224 (5%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRT-LDKNGYMAVQVGAGEAKVK 59
            R G++A KLGM  ++  +G++  VT+L + +C V+ +    D NG +A     G+  V 
Sbjct: 95  FRVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKIAALTVGGKT-VS 153

Query: 60  NVSKP--MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
              KP     F+  + + PK+    F V  D+ ++  G+    ++F  GQ VDVT  TIG
Sbjct: 154 RFYKPDSRLEFYRDLGLPPKQIHKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIG 212

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
           KGF G MKR  F G  A+HG + +HR  G  STG   D  RV+   KM GRMG    TV 
Sbjct: 213 KGFQGVMKRWGFKGQPASHGQTKTHRRPGAISTG---DIARVWPGTKMPGRMGNQNRTVY 269

Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV--NCK 217
            L+V  V+ K  +I V G VPG  KN  + ++DS   A   +CK
Sbjct: 270 GLKVWRVNTKHNIIYVNGSVPG-HKNCLVKIKDSTLPAYKDSCK 312


>gi|114589225|ref|XP_516751.2| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
          Length = 348

 Score =  115 bits (287), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 117/221 (52%), Gaps = 5/221 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKV 58
            R G++A KLGM  ++  +G++  VT+L + +C V+ + + +  NG MA + VG      
Sbjct: 95  FRVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSR 154

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
              +  +  F+  + + PK+ +  F +  +  + P G+    ++F  GQ VDVT  TIGK
Sbjct: 155 FRKATSILEFYRELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGK 213

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G MKR  F G  ATHG + +HR  G+     D GRV+   KM G+MG    T   L+
Sbjct: 214 GFQGVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKMGNIYRTEYGLK 272

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           V  ++ K  +I V G VPG  KN  + VRDS   A    GK
Sbjct: 273 VWRINTKHNIIYVNGSVPG-HKNCLVKVRDSKLPAYKDLGK 312


>gi|255994807|ref|ZP_05427942.1| 50S ribosomal protein L3 [Eubacterium saphenum ATCC 49989]
 gi|255993520|gb|EEU03609.1| 50S ribosomal protein L3 [Eubacterium saphenum ATCC 49989]
          Length = 315

 Score =  114 bits (286), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/217 (36%), Positives = 115/217 (52%), Gaps = 3/217 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           +  +K GMT ++  +G  IPVTV+     +VV  +T   +GY AV+V   E K   ++KP
Sbjct: 14  IFGKKAGMTQIFTEDGVSIPVTVIEAYPAKVVQIKTQATDGYDAVKVAYIETKEHRINKP 73

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
            +G          +K+ EF  +   +   VG V + S  + G  VDVTG + GKG +G +
Sbjct: 74  KKGELDKAKAGAMRKMAEFTPENGVEYK-VGDVITVSELSEGNKVDVTGTSKGKGTAGNI 132

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH       +HG S   R  G+      PGRVFK  K  G MG  +VTV+NL++V + +
Sbjct: 133 KRHGHRRGPMSHG-SKHKRLAGALAGAAYPGRVFKGNKGPGHMGDEQVTVQNLDLVKLIE 191

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
            R ++LVKG VPG KK   ++V  S KS     GK +
Sbjct: 192 DRNVLLVKGAVPG-KKGGEVMVTYSKKSEYVLSGKAA 227


>gi|309777133|ref|ZP_07672096.1| 50S ribosomal protein L3 [Erysipelotrichaceae bacterium 3_1_53]
 gi|308915003|gb|EFP60780.1| 50S ribosomal protein L3 [Erysipelotrichaceae bacterium 3_1_53]
          Length = 228

 Score =  114 bits (286), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 117/209 (55%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT V+  +G  IPVTV+      V+  +T++ +GY AVQ+G  + K    +K
Sbjct: 3   GILGRKLGMTQVFTEDGTLIPVTVVEACPNVVLQKKTVENDGYEAVQLGFEDVKETRSTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
              G  +  N +PK+ + E R  +  D L +G+  +   F+ G+ VDV G + GKGF+G 
Sbjct: 63  GEAGHAAKANTAPKRFVKEVRDSEFAD-LELGAEINVGIFSAGETVDVIGTSKGKGFNGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGS---TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           + R+N      +HG S  HR  GS    G     G++ K   MAG+ GG R T +NL V+
Sbjct: 122 IVRNNAKIGPKSHG-SGHHRHIGSLATNGITSRQGKIIKGTIMAGQEGGYRTTNQNLTVI 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            VD +   +L+KG VPG K+   ++VR +
Sbjct: 181 KVDVENNYLLIKGNVPGPKR-GMVMVRTA 208


>gi|295099237|emb|CBK88326.1| LSU ribosomal protein L3P [Eubacterium cylindroides T2-87]
          Length = 231

 Score =  114 bits (285), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 112/212 (52%), Gaps = 6/212 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT V+  +G  IPVTV+      V+  +T   +GY AVQ+G  E K K  +K
Sbjct: 3   GLLGRKLGMTQVFTEDGVLIPVTVVEATPNVVLQKKTAQSDGYDAVQLGFEEIKEKRTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
              G     N SPK+ + E R    D  + VG +   + F  G+ VDV G + GKG++G 
Sbjct: 63  ANIGHCKKANTSPKRFIKEVR--NCDMEVNVGDLIDVTIFAAGETVDVIGTSKGKGYNGT 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGS---TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           + R+N      +HG S + R  GS    G     GR+ K   MAG+ GG   T  NL V+
Sbjct: 121 IVRNNAHQGPKSHGGSKNIRHIGSLATNGITSRQGRIMKGTIMAGQEGGYTTTNPNLTVI 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +   +L+KG VPG KK   ++VR +  S
Sbjct: 181 KVDKENNYLLIKGNVPGPKK-GLVMVRTAKTS 211


>gi|297671980|ref|XP_002814097.1| PREDICTED: LOW QUALITY PROTEIN: 39S ribosomal protein L3,
           mitochondrial-like [Pongo abelii]
          Length = 374

 Score =  114 bits (285), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 119/221 (53%), Gaps = 6/221 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKV 58
            R G++A KLGM  ++  +G++  VT+L + +C V+ + + +  NG MA + VG      
Sbjct: 122 FRVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENHNGKMATLSVGGKTVSR 181

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
              +  +  F+  + + PK+ +  F +  D+  L   S+++ ++F  GQ VDVT  TIGK
Sbjct: 182 FRKATSILEFYRELGLPPKQTVKXFNIT-DNAALNRHSLYA-AHFRPGQYVDVTAKTIGK 239

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G MKR  F G  ATHG + +HR  G+     D GRV+   KM G+MG    T   L+
Sbjct: 240 GFQGVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKMGNIYRTEYGLK 298

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           V  ++ K  +I V G VPG  KN  + VRDS   A    GK
Sbjct: 299 VWRINTKHNIIYVNGSVPG-HKNCLVKVRDSSMPAYKDLGK 338


>gi|122692439|ref|NP_001073786.1| 39S ribosomal protein L3, mitochondrial [Bos taurus]
 gi|88932613|sp|Q3ZBX6|RM03_BOVIN RecName: Full=39S ribosomal protein L3, mitochondrial; Short=L3mt;
           Short=MRP-L3
 gi|73586745|gb|AAI03048.1| Mitochondrial ribosomal protein L3 [Bos taurus]
 gi|296490939|gb|DAA33052.1| 39S ribosomal protein L3, mitochondrial [Bos taurus]
          Length = 348

 Score =  114 bits (285), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 79/216 (36%), Positives = 118/216 (54%), Gaps = 9/216 (4%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59
           R G+VA KLGM  ++  +G++  VT+L + +C V+ +   +  NG MA + VG       
Sbjct: 96  RVGLVALKLGMMPLWTKDGKKHVVTLLQVQDCHVLKYTPKENHNGKMAALTVGGKTVSRF 155

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           + S  +  F+  + + PK+K+  F V  D+ ++  G+    ++F  GQ VDVT  TIGKG
Sbjct: 156 HKSTSILEFYQELGLPPKQKIKMFNVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 214

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           F G MKR  F G  ATHG + +HR  G  STG   D  RV+   KM G++G    T   L
Sbjct: 215 FQGVMKRWGFKGQPATHGQTKTHRRPGAISTG---DVARVWPGTKMPGQLGNVDRTAFGL 271

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           +V  ++ K  +I V G VPG  +N  + ++DS   A
Sbjct: 272 KVWRINTKHNIIYVNGSVPG-HRNCLVKIKDSVLPA 306


>gi|218672012|ref|ZP_03521681.1| 50S ribosomal protein L3 [Rhizobium etli GR56]
          Length = 74

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/74 (72%), Positives = 62/74 (83%), Gaps = 1/74 (1%)

Query: 141 SHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKK 200
           SHRSHGSTG RQDPG+VFKNKKMAG MG  RVT +NLEVVS D+ RGLIL+KG VPG+ K
Sbjct: 1   SHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVVSTDEDRGLILIKGAVPGS-K 59

Query: 201 NSWILVRDSFKSAV 214
            +WI+VRD+ KSA 
Sbjct: 60  GAWIIVRDAVKSAA 73


>gi|48645|emb|CAA32542.1| ribosomal protein L3 [Yersinia pseudotuberculosis]
          Length = 129

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 64/124 (51%), Positives = 80/124 (64%), Gaps = 1/124 (0%)

Query: 82  EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSIS 141
           EFR+ +  +    G   S   F   + VDVTG + GKGF+G +KR NF    ATHG S+S
Sbjct: 1   EFRLPEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLS 59

Query: 142 HRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKN 201
           HR  GS G  Q PG+VFK KKMAG MG  RVTV++L+VV VD +R L+LVKG VPGA   
Sbjct: 60  HRVPGSIGQNQTPGKVFKGKKMAGHMGDERVTVQSLDVVRVDAERNLLLVKGAVPGATGG 119

Query: 202 SWIL 205
           + I+
Sbjct: 120 NLIV 123


>gi|313897304|ref|ZP_07830848.1| 50S ribosomal protein L3 [Clostridium sp. HGF2]
 gi|312958025|gb|EFR39649.1| 50S ribosomal protein L3 [Clostridium sp. HGF2]
          Length = 228

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 116/209 (55%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT V+  +G  IPVTV+      V+  +T++ +GY AVQ+G  + K    +K
Sbjct: 3   GILGRKLGMTQVFTEDGTLIPVTVVEACPNVVLQKKTVENDGYEAVQLGFEDVKETRSTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
              G  +  N +PK+ + E R  +  D L +G+  +   F+ G+ VDV G + GKGF G 
Sbjct: 63  GEAGHAAKANTAPKRFVKEVRDSEFAD-LELGAEVNVGIFSAGETVDVIGTSKGKGFMGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGS---TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           + R+N      +HG S  HR  GS    G     G++ K   MAG+ GG R T +NL V+
Sbjct: 122 IVRNNAKIGPKSHG-SGHHRHIGSLATNGITSRQGKILKGTMMAGQEGGYRTTNQNLTVI 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            VD +   +L+KG VPG K+   ++VR +
Sbjct: 181 KVDVENNYLLIKGNVPGPKR-GMVMVRTA 208


>gi|157821097|ref|NP_001100322.1| 39S ribosomal protein L3, mitochondrial [Rattus norvegicus]
 gi|149018711|gb|EDL77352.1| mitochondrial ribosomal protein L3 (predicted), isoform CRA_a
           [Rattus norvegicus]
          Length = 348

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 120/223 (53%), Gaps = 13/223 (5%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRT-LDKNGYMAVQVGAGEAKVKN 60
           R G++A KLGM  ++  +G++  VT+L + +C V+ +    D NG  A     G+   + 
Sbjct: 96  RVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKTAALTVGGKTGSR- 154

Query: 61  VSKP--MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           + KP  +  F+  + + PK+ +  F V  D+ ++  G+    ++F  GQ VDVT  TIGK
Sbjct: 155 LYKPNSILEFYRDLGLPPKQTIKIFHV-TDNAVIKPGTPLYAAHFRPGQYVDVTAKTIGK 213

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           GF G MKR  F G  A+HG + +HR  G  STG   D  RV+   KM G+MG    TV  
Sbjct: 214 GFQGVMKRWGFKGQPASHGQTKTHRRPGAISTG---DIARVWPGTKMPGQMGNQNRTVYG 270

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN--CK 217
           L+V  V+ K  +I V G VPG  +N  + ++DS   A    CK
Sbjct: 271 LKVWRVNTKHNIIYVNGSVPG-HRNCLVKIKDSTLPAYKDLCK 312


>gi|6005862|ref|NP_009139.1| 39S ribosomal protein L3, mitochondrial [Homo sapiens]
 gi|133116|sp|P09001|RM03_HUMAN RecName: Full=39S ribosomal protein L3, mitochondrial; Short=L3mt;
           Short=MRP-L3
 gi|34754|emb|CAA29639.1| unnamed protein product [Homo sapiens]
 gi|13097225|gb|AAH03375.1| Mitochondrial ribosomal protein L3 [Homo sapiens]
 gi|48145557|emb|CAG33001.1| MRPL3 [Homo sapiens]
 gi|119599615|gb|EAW79209.1| mitochondrial ribosomal protein L3 [Homo sapiens]
 gi|312152442|gb|ADQ32733.1| mitochondrial ribosomal protein L3 [synthetic construct]
          Length = 348

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 117/221 (52%), Gaps = 5/221 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKV 58
            R G++A KLGM  ++  +G++  VT+L + +C V+ + + +  NG MA + VG      
Sbjct: 95  FRVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSR 154

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
              +  +  F+  + + PK+ +  F +  +  + P G+    ++F  GQ VDVT  TIGK
Sbjct: 155 FRKATSILEFYRELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGK 213

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G MKR  F G  ATHG + +HR  G+     D GRV+   KM G+MG    T   L+
Sbjct: 214 GFQGVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKMGNIYRTEYGLK 272

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           V  ++ K  +I V G VPG  KN  + V+DS   A    GK
Sbjct: 273 VWRINTKHNIIYVNGSVPG-HKNCLVKVKDSKLPAYKDLGK 312


>gi|99032309|pdb|2FTC|C Chain C, Structural Model For The Large Subunit Of The Mammalian
           Mitochondrial Ribosome
          Length = 211

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 5/210 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59
           R G++A KLGM  ++  +G++  VT+L + +C V+ + + +  NG MA + VG       
Sbjct: 1   RVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSRF 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             +  +  F+  + + PK+ +  F +  +  + P G+    ++F  GQ VDVT  TIGKG
Sbjct: 61  RKATSILEFYRELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGKG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR  F G  ATHG + +HR  G+     D GRV+   KM G+MG    T   L+V
Sbjct: 120 FQGVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKMGNIYRTEYGLKV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
             ++ K  +I V G VPG  KN  + V+DS
Sbjct: 179 WRINTKHNIIYVNGSVPG-HKNCLVKVKDS 207


>gi|300174031|ref|YP_003773197.1| 50S ribosomal protein L3 [Leuconostoc gasicomitatum LMG 18811]
 gi|299888410|emb|CBL92378.1| 50S ribosomal protein L3 [Leuconostoc gasicomitatum LMG 18811]
          Length = 227

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 118/217 (54%), Gaps = 8/217 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  I VTV+      V+  +  + +GY A+Q+G  + +   
Sbjct: 1   MTKGILGRKVGMTQVFTEIGELIAVTVVEATPNVVLQVKNAETDGYSALQLGYQDKRTVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  S  N +PK+ + E R  + +     G       F  G+ VDVTG+T G GF
Sbjct: 61  SNKPEQGHASKANTTPKRYVREIRNAEGE--FNAGDEIKVDTFEAGEYVDVTGITKGHGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +K+        +HG S  HR  GS G   +  RVFK K + GRMG ++ T++N+ +V
Sbjct: 119 QGNIKKDGQSRGPMSHG-SRFHRRPGSMGAVIN--RVFKGKLLPGRMGNHKRTMQNVAIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
            VD +  L+L+KG VPGA K S + V+ + K  VN K
Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTVKSTVK--VNAK 209


>gi|148689149|gb|EDL21096.1| mitochondrial ribosomal protein L3, isoform CRA_a [Mus musculus]
          Length = 304

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/204 (38%), Positives = 109/204 (53%), Gaps = 10/204 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRT-LDKNGYMAVQVGAGEAKVK 59
            R G++A KLGM  ++  +G++  VT+L + +C V+ +    D NG +A     G+  V 
Sbjct: 95  FRVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKIAALTVGGKT-VS 153

Query: 60  NVSKP--MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
              KP     F+  + + PK+    F V  D+ ++  G+    ++F  GQ VDVT  TIG
Sbjct: 154 RFYKPDSRLEFYRDLGLPPKQIHKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIG 212

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
           KGF G MKR  F G  A+HG + +HR  G  STG   D  RV+   KM GRMG    TV 
Sbjct: 213 KGFQGVMKRWGFKGQPASHGQTKTHRRPGAISTG---DIARVWPGTKMPGRMGNQNRTVY 269

Query: 176 NLEVVSVDDKRGLILVKGCVPGAK 199
            L+V  V+ K  +I V G VPG K
Sbjct: 270 GLKVWRVNTKHNIIYVNGSVPGHK 293


>gi|57530745|ref|NP_001006366.1| 39S ribosomal protein L3, mitochondrial [Gallus gallus]
 gi|53128932|emb|CAG31347.1| hypothetical protein RCJMB04_5e20 [Gallus gallus]
          Length = 348

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/211 (36%), Positives = 112/211 (53%), Gaps = 5/211 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R GVVA KLGM  ++   G++  VT+L + +C V+ + + + +G    ++  G   V  
Sbjct: 96  VRVGVVAVKLGMMPIWTKSGKKHAVTLLKVQDCHVLKYVSKEDSGGKTAKLLVGGKNVSP 155

Query: 61  VSKPMRGF--FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
            SK       F    V  K+K+  F V  DD ++  G+    ++F  GQ+VDVT  TIGK
Sbjct: 156 FSKSEAEMEIFREAGVPRKQKVTTFNVT-DDAIIKPGTPLYAAHFRPGQIVDVTAKTIGK 214

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G MKR  F G  A+HG + +HR  G+    +   RVF  KKM G+MG    T   L+
Sbjct: 215 GFQGVMKRWGFKGQPASHGQTKTHRRPGAISTNKV-SRVFPGKKMPGKMGNIYRTSFGLK 273

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           V  ++ K  +I V G VPG   N  + VRD+
Sbjct: 274 VWRINTKHDIIYVHGSVPG-HTNCLVKVRDT 303


>gi|147906354|ref|NP_001088168.1| mitochondrial ribosomal protein L3 [Xenopus laevis]
 gi|54035102|gb|AAH84076.1| LOC494992 protein [Xenopus laevis]
          Length = 341

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 104/198 (52%), Gaps = 4/198 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK--NGYMAVQVGAGEAKVK 59
           R G++A KLGM  ++   G +  VT+L + +C V+ +   ++      ++ VG       
Sbjct: 91  RVGLIAVKLGMMPIWTKSGEKHAVTMLQVRDCHVIKYTPKEEFDGKTSSLTVGGKNVSPF 150

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             S+ +   +    V PK+K+  F+V  D+ ++  G+    ++F  GQ VDVT  TIGKG
Sbjct: 151 YKSESVMEMYREAGVPPKQKISIFKVS-DNAIIKPGTPLYAAHFRPGQFVDVTAKTIGKG 209

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR  + G  A+HG + +HR  G+     DP RVF   KM GRMG    T   L+V
Sbjct: 210 FQGVMKRWGYKGQPASHGQTKTHRRPGAISS-GDPARVFPGTKMPGRMGNIYRTSYALKV 268

Query: 180 VSVDDKRGLILVKGCVPG 197
             V+ K  +I V G VPG
Sbjct: 269 WRVNTKHNIIYVNGSVPG 286


>gi|149018712|gb|EDL77353.1| mitochondrial ribosomal protein L3 (predicted), isoform CRA_b
           [Rattus norvegicus]
          Length = 304

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/203 (36%), Positives = 111/203 (54%), Gaps = 10/203 (4%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRT-LDKNGYMAVQVGAGEAKVKN 60
           R G++A KLGM  ++  +G++  VT+L + +C V+ +    D NG  A     G+   + 
Sbjct: 96  RVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKTAALTVGGKTGSR- 154

Query: 61  VSKP--MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           + KP  +  F+  + + PK+ +  F V  D+ ++  G+    ++F  GQ VDVT  TIGK
Sbjct: 155 LYKPNSILEFYRDLGLPPKQTIKIFHV-TDNAVIKPGTPLYAAHFRPGQYVDVTAKTIGK 213

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           GF G MKR  F G  A+HG + +HR  G  STG   D  RV+   KM G+MG    TV  
Sbjct: 214 GFQGVMKRWGFKGQPASHGQTKTHRRPGAISTG---DIARVWPGTKMPGQMGNQNRTVYG 270

Query: 177 LEVVSVDDKRGLILVKGCVPGAK 199
           L+V  V+ K  +I V G VPG +
Sbjct: 271 LKVWRVNTKHNIIYVNGSVPGHR 293


>gi|149729728|ref|XP_001497211.1| PREDICTED: similar to Mitochondrial ribosomal protein L3 [Equus
           caballus]
          Length = 348

 Score =  112 bits (280), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 114/212 (53%), Gaps = 9/212 (4%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NG-YMAVQVGAGEAKVK 59
           R G++A KLGM  ++  +G++   T+L + +C V+ +   +  NG   A+ VG       
Sbjct: 96  RVGLIALKLGMMPLWTKDGQKHVATLLQVQDCHVLKYTPKENHNGKRAALTVGGKTVSRF 155

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             S  +  F+  + + PK+K+  F V  D+ ++  G+    ++F  GQ VDVT  TIGKG
Sbjct: 156 RKSTSILEFYQELGLPPKQKVKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 214

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           F G MKR  F G  ATHG + +HR  G  STG   D  RV+   KM G+MG    T   L
Sbjct: 215 FQGVMKRWGFKGQPATHGQTKTHRRPGAISTG---DVARVWPGTKMPGQMGNIDRTAYGL 271

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +V  ++ K  +I V G VPG  KN  + +RDS
Sbjct: 272 KVWRINTKHNIIYVNGSVPG-HKNCLVKIRDS 302


>gi|311268535|ref|XP_001925073.2| PREDICTED: 39S ribosomal protein L3, mitochondrial [Sus scrofa]
          Length = 399

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/212 (36%), Positives = 117/212 (55%), Gaps = 9/212 (4%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59
           R G++A KLGM  ++  +G++  VT+L + +C V+ +   +  NG MA + VG       
Sbjct: 147 RVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTPKENHNGRMAALTVGGKTVSHF 206

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           + S  +  F+  + + PK+K+  F V ++  + P G+    ++F  GQ VDVT  TIGKG
Sbjct: 207 HKSASILEFYQELGLPPKQKVKIFNVTENAVIKP-GTPLYAAHFRPGQYVDVTAKTIGKG 265

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           F G M+R  F G  ATHG + +HR  G  STG   D  RV+   KM G++G    T   L
Sbjct: 266 FQGVMRRWGFKGQPATHGQTKTHRRPGAISTG---DVARVWPGTKMPGQLGNIDRTAFGL 322

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +V  ++ K  +I V G VPG  KN  + ++DS
Sbjct: 323 KVWRINTKHNIIYVNGSVPG-HKNCLVKIKDS 353


>gi|255644742|gb|ACU22873.1| unknown [Glycine max]
          Length = 177

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 58/128 (45%), Positives = 85/128 (66%), Gaps = 1/128 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K GM+ +++  G RIP+TVL +D+  V   +T +K G+ A+Q+G G  K K++
Sbjct: 51  RTGLIAVKCGMSALWDKWGARIPITVLWVDDNIVSQIKTPEKEGFCALQIGCGHKKDKHL 110

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F +  V  K+KL EF V  +D LLPVG+  +  +F  GQ VD++G+T GKGF 
Sbjct: 111 TKPEVGHFRAQGVPMKRKLREFPVT-EDALLPVGTSLNVRHFVPGQFVDISGITKGKGFQ 169

Query: 122 GAMKRHNF 129
           G MKRH F
Sbjct: 170 GVMKRHGF 177


>gi|160914559|ref|ZP_02076774.1| hypothetical protein EUBDOL_00565 [Eubacterium dolichum DSM 3991]
 gi|158433717|gb|EDP12006.1| hypothetical protein EUBDOL_00565 [Eubacterium dolichum DSM 3991]
          Length = 234

 Score =  112 bits (279), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/211 (36%), Positives = 113/211 (53%), Gaps = 9/211 (4%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT V+  +G  IPVTV+      V+  +T++ +GY AVQ+G  + K K  +K
Sbjct: 8   GILGRKLGMTQVFTEDGTLIPVTVVEACPNIVLQKKTVENDGYNAVQIGFEDIKEKRTTK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
              G     N + K+   E R   D D   L +G+      F  G+ VDV G + GKG++
Sbjct: 68  ANVGHAKKANTTAKRFAREVR---DADFADLDLGAEVKVDIFVAGETVDVIGTSKGKGYN 124

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGS---TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           G + R+N      THG S + R  GS    G     G++ K   MAG+ GG R T +NL 
Sbjct: 125 GTIVRNNAHQGPKTHGGSKNIRHIGSLATNGITSRQGKILKGTIMAGQEGGYRTTNQNLT 184

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           V+ VD +   +L+KG VPG K+   ++VR +
Sbjct: 185 VIKVDVENNYLLIKGNVPGPKR-GLVMVRSA 214


>gi|256847763|ref|ZP_05553208.1| 50S ribosomal protein L3 [Lactobacillus coleohominis 101-4-CHN]
 gi|256715452|gb|EEU30428.1| 50S ribosomal protein L3 [Lactobacillus coleohominis 101-4-CHN]
          Length = 220

 Score =  112 bits (279), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/214 (37%), Positives = 124/214 (57%), Gaps = 8/214 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+   G  +PVTV+ +    V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGKKVGMTQVFTDNGELVPVTVVDVTPNVVMQIKTVENDGYNAVQLGFDDKREIL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +K  +G  +  N +PK+ + E R  +  D + VG       F  G+ VDVTG+T G G+
Sbjct: 61  SNKAEQGHAAKANTAPKRFIGEIRDAELGDDIKVGDEVKADIFAEGETVDVTGITKGHGY 120

Query: 121 SGAMKRHNFGGLRA--THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
            G +  H  G  R    HG S  HR  GS G   +   VFK KK+ GRMGGN  T+++L+
Sbjct: 121 QGNI--HKDGQSRGPMAHG-SRYHRRPGSLGAIIN--HVFKGKKLPGRMGGNTRTMQHLQ 175

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VV VD +  ++L+KG VPGA K S++ +++S K+
Sbjct: 176 VVKVDTENNVLLIKGNVPGANK-SYVTIKNSVKA 208


>gi|118586994|ref|ZP_01544426.1| ribosomal protein L3, BL3 [Oenococcus oeni ATCC BAA-1163]
 gi|118432616|gb|EAV39350.1| ribosomal protein L3, BL3 [Oenococcus oeni ATCC BAA-1163]
          Length = 240

 Score =  112 bits (279), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/211 (36%), Positives = 113/211 (53%), Gaps = 6/211 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  +G  IPVTV+      V+  +T + +GY A+Q+G  + +   
Sbjct: 1   MTKGILGRKVGMTQVFTDKGELIPVTVIEALPNVVLQVKTPETDGYSALQLGVFDKRKIA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G     + +PK+ + E R  + D     G       F  G+ VDV G+T G GF
Sbjct: 61  ANKPEQGHAKKASAAPKRYVREIRDAQGD--YKQGDQVKVDVFAAGEYVDVQGITKGHGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G++KR         HG S  HR  GS G   +  +VFK K + G+MGG+  T + L V 
Sbjct: 119 QGSIKRLGQSRGPMAHG-SRYHRRPGSMGAIIN--KVFKGKLLPGQMGGDLRTAQKLLVA 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD    LIL+KG VPGA K S++ ++ + K
Sbjct: 176 GVDPANNLILIKGNVPGANK-SFVTIKSTVK 205


>gi|226226279|ref|YP_002760385.1| 50S ribosomal protein L3 [Gemmatimonas aurantiaca T-27]
 gi|226089470|dbj|BAH37915.1| 50S ribosomal protein L3 [Gemmatimonas aurantiaca T-27]
          Length = 227

 Score =  112 bits (279), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/224 (34%), Positives = 110/224 (49%), Gaps = 22/224 (9%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT ++N  G+++P TV+      V    T+D+ G+ +V++G G  +V   +K
Sbjct: 3   GIIGRKLGMTQLFNELGQQVPCTVVEATPNPVTKVSTVDQAGFASVELGFGAQRVARANK 62

Query: 64  -----PMRGFFSSVNV---------SPKKKLFEFRVQKDDDLLPVGSVFSP------SYF 103
                P     S   V         +P   L  FR+       P    ++P        F
Sbjct: 63  KGERTPKGHRASKAEVGHAKKAGLDAPPAVLKSFRLDDAPGKNPEIPTYTPGDKITVDIF 122

Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
           T G+ V VTG + G+GF G +KRH F G   THG +  HR  GS G   DP RV K KKM
Sbjct: 123 TPGERVKVTGTSKGRGFQGVVKRHGFHGGPNTHG-NTKHRKPGSIGAGTDPSRVIKGKKM 181

Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVR 207
            G+ G  + T  N+ +  VD +R LI ++G V G   N  + VR
Sbjct: 182 PGQYGNTQHTALNIRIEKVDTERNLIYLRGSVAGP-TNGILFVR 224


>gi|116490658|ref|YP_810202.1| 50S ribosomal protein L3P [Oenococcus oeni PSU-1]
 gi|290890074|ref|ZP_06553157.1| hypothetical protein AWRIB429_0547 [Oenococcus oeni AWRIB429]
 gi|122277158|sp|Q04G85|RL3_OENOB RecName: Full=50S ribosomal protein L3
 gi|116091383|gb|ABJ56537.1| LSU ribosomal protein L3P [Oenococcus oeni PSU-1]
 gi|290480265|gb|EFD88906.1| hypothetical protein AWRIB429_0547 [Oenococcus oeni AWRIB429]
          Length = 247

 Score =  112 bits (279), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/211 (36%), Positives = 113/211 (53%), Gaps = 6/211 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  +G  IPVTV+      V+  +T + +GY A+Q+G  + +   
Sbjct: 1   MTKGILGRKVGMTQVFTDKGELIPVTVIEALPNVVLQVKTPETDGYSALQLGVFDKRKIA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G     + +PK+ + E R  + D     G       F  G+ VDV G+T G GF
Sbjct: 61  ANKPEQGHAKKASAAPKRYVREIRDAQGD--YKQGDKVKVDVFAAGEYVDVQGITKGHGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G++KR         HG S  HR  GS G   +  +VFK K + G+MGG+  T + L V 
Sbjct: 119 QGSIKRLGQSRGPMAHG-SRYHRRPGSMGSIIN--KVFKGKLLPGQMGGDLRTAQKLLVA 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD    LIL+KG VPGA K S++ ++ + K
Sbjct: 176 GVDPANNLILIKGNVPGANK-SFVTIKSTVK 205


>gi|194383748|dbj|BAG59232.1| unnamed protein product [Homo sapiens]
          Length = 375

 Score =  111 bits (277), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 116/221 (52%), Gaps = 5/221 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKV 58
            R G++A KLGM  ++  +G++  VT+L + +C V+ + + +  NG MA + VG      
Sbjct: 122 FRVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSR 181

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
              +  +  F+  + + PK+ +  F +  +  + P G+    ++F  GQ VDVT  TIGK
Sbjct: 182 FRKATSILEFYRELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGK 240

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G MKR  F G  ATHG + +HR  G+     D GRV+   KM G+ G    T   L+
Sbjct: 241 GFQGVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKTGNIYRTEYGLK 299

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           V  ++ K  +I V G VPG  KN  + V+DS   A    GK
Sbjct: 300 VWRINTKHNIIYVNGSVPG-HKNCLVKVKDSKLPAYKDLGK 339


>gi|89898720|ref|YP_515830.1| 50S ribosomal protein L3 [Chlamydophila felis Fe/C-56]
 gi|109893420|sp|Q252V3|RL3_CHLFF RecName: Full=50S ribosomal protein L3
 gi|89332092|dbj|BAE81685.1| 50S ribosomal protein L3 [Chlamydophila felis Fe/C-56]
          Length = 221

 Score =  111 bits (277), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 109/208 (52%), Gaps = 10/208 (4%)

Query: 1   MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58
           MRS   ++ +K GM  V++ +G  +  +V+ +    V   +    +GY A+Q+GA E  V
Sbjct: 1   MRSQLSLMGKKEGMIHVFDKDGNLVACSVISMSPNVVSQIKVDSTDGYNAIQMGADEISV 60

Query: 59  ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
                 K V+KP+ G F        + L E RV +D  +   +GS F    F     VD+
Sbjct: 61  PEKTLQKRVNKPILGHFKKSGSRVFRTLKEVRVSEDAVNEASLGSEFGLEVFEDVSSVDI 120

Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
           +G++ GKGF G MK+  F G   THG    HR  GS G R  PGR F   K    MG   
Sbjct: 121 SGVSKGKGFQGVMKKFGFRGGPKTHGSGF-HRHAGSIGMRSTPGRCFPGSKRPSHMGAVN 179

Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAK 199
           VT+KNLEV+ +D ++ ++LVKG +PG +
Sbjct: 180 VTIKNLEVIKIDLEKKVLLVKGAIPGPR 207


>gi|330444113|ref|YP_004377099.1| 50S ribosomal protein L3 [Chlamydophila pecorum E58]
 gi|328807223|gb|AEB41396.1| ribosomal protein L3 [Chlamydophila pecorum E58]
          Length = 215

 Score =  110 bits (276), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 113/212 (53%), Gaps = 8/212 (3%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV------ 58
           ++ +K GM  V++ +G  +  +V+ ++   V   +TL+K+GY ++Q+G+G+         
Sbjct: 3   LMGKKEGMLHVFDKDGSLVACSVISIEPNVVTQIKTLEKDGYTSLQMGSGKESAPLKTLQ 62

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
           K  +K   G          + L E RV ++      +G+ F    F     VDV+G++ G
Sbjct: 63  KRYTKAKLGHLKKSRDQVFRVLKEVRVSEEVIGSTSLGAAFGIEVFEGVGAVDVSGVSKG 122

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF G MK++ F G   +HG    HR  GS G R  PGR F   K    MG   VT+KNL
Sbjct: 123 KGFQGVMKKYGFRGGPGSHGSGF-HRHAGSIGMRSTPGRCFPGSKRPSHMGSENVTIKNL 181

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           EV+ +D +R ++LVKG +PG+K +  ++ R S
Sbjct: 182 EVIKIDLERKVLLVKGAIPGSKGSVVVVKRSS 213


>gi|3914749|sp|P94799|RL3_ACTAC RecName: Full=50S ribosomal protein L3
 gi|1841322|dbj|BAA10947.1| ribosomal protein L3 [Actinobacillus actinomycetemcomitans]
          Length = 121

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/104 (58%), Positives = 74/104 (71%), Gaps = 1/104 (0%)

Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
           VDVTG + GKGF G +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G
Sbjct: 19  VDVTGTSKGKGFQGGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLG 78

Query: 169 GNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
             RVTV++LEVV VD +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 79  NERVTVQSLEVVRVDAERKLLLVKGAVPGA-TGSDVIVKPAVKA 121


>gi|313847648|emb|CBY16636.1| putative 50s ribosomal protein [Chlamydophila psittaci RD1]
 gi|325507077|gb|ADZ18715.1| 50S ribosomal protein L3 [Chlamydophila psittaci 6BC]
 gi|328914285|gb|AEB55118.1| ribosomal protein L3 [Chlamydophila psittaci 6BC]
          Length = 221

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 110/208 (52%), Gaps = 10/208 (4%)

Query: 1   MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58
           MRS   ++ +K GM  V++ +G  +  +V+ + +  V   +    +GY A+Q+GA E  V
Sbjct: 1   MRSQLSLMGKKEGMIHVFDKDGNLVACSVISMSSNVVTQIKVDSTDGYNAIQMGANEINV 60

Query: 59  ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
                 K V+KP  G F        + L E R+ ++  + + +GS F    F     VD+
Sbjct: 61  PEKTLQKRVNKPSLGHFKKSGSRVFRSLKEVRLSEEAVNEVSLGSEFGLEVFESVSSVDI 120

Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
           +G++ GKGF G MKR  F G   +HG    HR  GS G R  PGR F   K    MG   
Sbjct: 121 SGVSKGKGFQGVMKRFGFRGGPQSHGSGF-HRHAGSIGMRSTPGRCFPGSKRPSHMGTVN 179

Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAK 199
           VTVKNLEV+ VD ++ ++LVKG +PG +
Sbjct: 180 VTVKNLEVIKVDLEKKVLLVKGAIPGPR 207


>gi|2500228|sp|P72233|RL3_PLARO RecName: Full=50S ribosomal protein L3
 gi|1679861|emb|CAA67347.1| ribosomal protein L3 [Planobispora rosea]
          Length = 140

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 80/135 (59%), Gaps = 1/135 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+ +KLGMT V++ + R +PVTV+    C V   RT +K+GY AVQ+G G+   + V+K
Sbjct: 7   GVLGKKLGMTQVFDADNRMVPVTVVEAGPCVVTRVRTPEKDGYSAVQLGFGQIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+  +     ++P++   E R   D     +G       F  GQ VDVTG + GKGF+G 
Sbjct: 67  PLGDYLRKHEITPRRYFTEIRTD-DASEYTIGQEVLADTFEAGQFVDVTGKSKGKGFAGV 125

Query: 124 MKRHNFGGLRATHGV 138
           MKRH FGGL A+HG 
Sbjct: 126 MKRHGFGGLGASHGT 140


>gi|33236514|gb|AAP98602.1| ribosomal protein L3 [Chlamydophila pneumoniae TW-183]
          Length = 235

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 116/221 (52%), Gaps = 11/221 (4%)

Query: 1   MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58
           MRS   V+ +K GM  +++ +G  +  +V+ ++   V   +T + +GY ++Q+GA E   
Sbjct: 17  MRSHISVMGKKEGMIHIFDKDGSLVACSVIRVEPNVVTQIKTKESDGYFSLQIGAEEMNA 76

Query: 59  ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
                 K VSKP  G          + L E R  ++  + + +G  F    F     VDV
Sbjct: 77  PAHTITKRVSKPKLGHLRKAGGRVFRFLKEVRGSEEALNGVSLGDAFGLEVFEDVSSVDV 136

Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
            G++ GKGF G MK+  F G   +HG    HR  GS G R  PGR F   K    MG   
Sbjct: 137 RGISKGKGFQGVMKKFGFRGGPGSHGSGF-HRHAGSIGMRSTPGRCFPGSKRPSHMGAEN 195

Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VTVKNLEV+ VD ++ ++LVKG +PGA + S ++V+ S ++
Sbjct: 196 VTVKNLEVIKVDLEKKVLLVKGAIPGA-RGSIVIVKHSSRT 235


>gi|16752393|ref|NP_444652.1| 50S ribosomal protein L3 [Chlamydophila pneumoniae AR39]
 gi|161353776|ref|NP_224843.2| 50S ribosomal protein L3 [Chlamydophila pneumoniae CWL029]
 gi|161353803|ref|NP_300703.2| 50S ribosomal protein L3 [Chlamydophila pneumoniae J138]
 gi|161484684|ref|NP_876945.2| 50S ribosomal protein L3 [Chlamydophila pneumoniae TW-183]
 gi|7674301|sp|Q9Z7Q7|RL3_CHLPN RecName: Full=50S ribosomal protein L3
 gi|7189035|gb|AAF37984.1| ribosomal protein L3 [Chlamydophila pneumoniae AR39]
          Length = 219

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 116/221 (52%), Gaps = 11/221 (4%)

Query: 1   MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58
           MRS   V+ +K GM  +++ +G  +  +V+ ++   V   +T + +GY ++Q+GA E   
Sbjct: 1   MRSHISVMGKKEGMIHIFDKDGSLVACSVIRVEPNVVTQIKTKESDGYFSLQIGAEEMNA 60

Query: 59  ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
                 K VSKP  G          + L E R  ++  + + +G  F    F     VDV
Sbjct: 61  PAHTITKRVSKPKLGHLRKAGGRVFRFLKEVRGSEEALNGVSLGDAFGLEVFEDVSSVDV 120

Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
            G++ GKGF G MK+  F G   +HG    HR  GS G R  PGR F   K    MG   
Sbjct: 121 RGISKGKGFQGVMKKFGFRGGPGSHGSGF-HRHAGSIGMRSTPGRCFPGSKRPSHMGAEN 179

Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VTVKNLEV+ VD ++ ++LVKG +PGA + S ++V+ S ++
Sbjct: 180 VTVKNLEVIKVDLEKKVLLVKGAIPGA-RGSIVIVKHSSRT 219


>gi|62184737|ref|YP_219522.1| 50S ribosomal protein L3 [Chlamydophila abortus S26/3]
 gi|81313080|sp|Q5L720|RL3_CHLAB RecName: Full=50S ribosomal protein L3
 gi|62147804|emb|CAH63550.1| putative 50s ribosomal protein [Chlamydophila abortus S26/3]
          Length = 221

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 108/202 (53%), Gaps = 8/202 (3%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV------ 58
           ++ +K GM  V++ +G  +  +V+ + +  V   +    +GY A+Q+GA E  V      
Sbjct: 7   LMGKKEGMIHVFDKDGNLVACSVISMSSNVVTQIKVDSTDGYNAIQMGANEINVPEKTLH 66

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
           K V+KP  G F        ++L E R+ ++  + + +GS F    F     +DV+G++ G
Sbjct: 67  KRVNKPSIGHFKKSGSRVFRELKEVRLSEEAVNEVSLGSEFGLEVFESVSSIDVSGVSKG 126

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF G MKR  F G   +HG    HR  GS G R  PGR F   K    MG   VTVKNL
Sbjct: 127 KGFQGVMKRFGFRGGPQSHGSGF-HRHAGSIGMRSTPGRCFPGSKRPSHMGTVNVTVKNL 185

Query: 178 EVVSVDDKRGLILVKGCVPGAK 199
           EV+ +D ++ ++LVKG +PG +
Sbjct: 186 EVIKIDLEKKVLLVKGAIPGPR 207


>gi|4376945|gb|AAD18786.1| L3 Ribosomal Protein [Chlamydophila pneumoniae CWL029]
 gi|8979019|dbj|BAA98854.1| L3 ribosomal protein [Chlamydophila pneumoniae J138]
          Length = 225

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 116/221 (52%), Gaps = 11/221 (4%)

Query: 1   MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58
           MRS   V+ +K GM  +++ +G  +  +V+ ++   V   +T + +GY ++Q+GA E   
Sbjct: 7   MRSHISVMGKKEGMIHIFDKDGSLVACSVIRVEPNVVTQIKTKESDGYFSLQIGAEEMNA 66

Query: 59  ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
                 K VSKP  G          + L E R  ++  + + +G  F    F     VDV
Sbjct: 67  PAHTITKRVSKPKLGHLRKAGGRVFRFLKEVRGSEEALNGVSLGDAFGLEVFEDVSSVDV 126

Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
            G++ GKGF G MK+  F G   +HG    HR  GS G R  PGR F   K    MG   
Sbjct: 127 RGISKGKGFQGVMKKFGFRGGPGSHGSGF-HRHAGSIGMRSTPGRCFPGSKRPSHMGAEN 185

Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VTVKNLEV+ VD ++ ++LVKG +PGA + S ++V+ S ++
Sbjct: 186 VTVKNLEVIKVDLEKKVLLVKGAIPGA-RGSIVIVKHSSRT 225


>gi|295425652|ref|ZP_06818339.1| 50S ribosomal protein L3 [Lactobacillus amylolyticus DSM 11664]
 gi|295064668|gb|EFG55589.1| 50S ribosomal protein L3 [Lactobacillus amylolyticus DSM 11664]
          Length = 212

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/211 (36%), Positives = 118/211 (55%), Gaps = 5/211 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  +PVTV+      V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGRKVGMTQIFTKDGALVPVTVVEATPNVVMQVKTVESDGYDAVQLGYQDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    SPK+ + E R  +  +   VGS  +   F  G +VDVTG T G G+
Sbjct: 61  SNKPEKGHAAKAKTSPKRFIREIRGVELKN-YEVGSEVTVDTFKEGDVVDVTGTTRGHGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR        THG S  HR  GS G   +  RV K K + G MG  +VT++NL + 
Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSIIN--RVPKGKHLPGHMGVKKVTIENLVIE 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            V   + ++++KG VPGA KNS I+V+ + K
Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIVVKTASK 206


>gi|116495947|ref|YP_807681.1| ribosomal protein L3 [Lactobacillus casei ATCC 334]
 gi|191639428|ref|YP_001988594.1| 50S ribosomal protein L3 [Lactobacillus casei BL23]
 gi|227533960|ref|ZP_03964009.1| ribosomal protein L3 [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|239630351|ref|ZP_04673382.1| 50S ribosomal protein L3 [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301067503|ref|YP_003789526.1| 50S ribosomal protein L3 [Lactobacillus casei str. Zhang]
 gi|122262653|sp|Q034Y3|RL3_LACC3 RecName: Full=50S ribosomal protein L3
 gi|226730526|sp|B3WAL7|RL3_LACCB RecName: Full=50S ribosomal protein L3
 gi|116106097|gb|ABJ71239.1| LSU ribosomal protein L3P [Lactobacillus casei ATCC 334]
 gi|190713730|emb|CAQ67736.1| 50S ribosomal protein L3 [Lactobacillus casei BL23]
 gi|227188337|gb|EEI68404.1| ribosomal protein L3 [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|239527963|gb|EEQ66964.1| 50S ribosomal protein L3 [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300439910|gb|ADK19676.1| Ribosomal protein L3 [Lactobacillus casei str. Zhang]
 gi|327383517|gb|AEA54993.1| 50S ribosomal protein L3 [Lactobacillus casei LC2W]
 gi|327386710|gb|AEA58184.1| 50S ribosomal protein L3 [Lactobacillus casei BD-II]
          Length = 210

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/212 (36%), Positives = 121/212 (57%), Gaps = 5/212 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ +K+GMT V+   G  +PVTV+ +    V+  +T++ +GY AVQ+G G+ +    
Sbjct: 3   RKGILGKKVGMTQVFTDNGELVPVTVVDVTPNVVMQVKTVESDGYEAVQLGYGDMREVLT 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G     + +PK+ + E R     D   +GS      F  G +VDVTG + G G+ 
Sbjct: 63  NKPSVGHAKKADTTPKRFVREIRDVALSD-YEIGSEVKADEFAAGDIVDVTGTSKGHGYQ 121

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +K+         HG S  HR  GS G   +  +VFK KK+ GRMG +  T++NL+VV+
Sbjct: 122 GNIKKDGQSRGPMAHG-SRYHRRPGSLGAIIN--KVFKGKKLPGRMGNHTRTMQNLQVVA 178

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D +  ++L+KG VPGA K S++ +R + K+A
Sbjct: 179 ADTEHNVLLIKGNVPGANK-SFVTIRSAVKAA 209


>gi|116334269|ref|YP_795796.1| 50S ribosomal protein L3 [Lactobacillus brevis ATCC 367]
 gi|122269049|sp|Q03PV7|RL3_LACBA RecName: Full=50S ribosomal protein L3
 gi|116099616|gb|ABJ64765.1| LSU ribosomal protein L3P [Lactobacillus brevis ATCC 367]
          Length = 216

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 113/208 (54%), Gaps = 5/208 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V+   G  IPVTV+      V+  +T++ +GY A+Q+G  + +    +K
Sbjct: 5   GILGKKVGMTQVFTDAGELIPVTVVEATPNVVLQVKTMENDGYNAIQLGYQDKREVLSNK 64

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G  +  N +PK+ + EF   +  D   V        F  G +VDVTG+T G G+ G 
Sbjct: 65  PEQGHVAKANTTPKRFIREFTDVELGD-YKVADEVKVDTFQAGDIVDVTGVTKGHGYQGN 123

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           + +         HG S  HR  GS G   +  RVF   K+ GRMG  +VT++NL +V  D
Sbjct: 124 IHKDGQSRGPMAHG-SRYHRRPGSLGAIIN--RVFPGMKLPGRMGNKQVTIQNLVIVKAD 180

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +  ++L+KG VPGA K S + V+ + +
Sbjct: 181 VENNVLLIKGNVPGANK-SLVTVKSAVR 207


>gi|124806820|ref|XP_001350840.1| mitochondrial ribosomal protein L3 precursor, putative [Plasmodium
           falciparum 3D7]
 gi|23496969|gb|AAN36520.1| mitochondrial ribosomal protein L3 precursor, putative [Plasmodium
           falciparum 3D7]
          Length = 341

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 113/210 (53%), Gaps = 4/210 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           RSG++  K+G   ++++ G +  VTV+ +DNC V+  +T+ KNGY A+++G G   V   
Sbjct: 80  RSGLLGYKVGCMSIWDVWGVKHAVTVVKIDNCYVINQKTISKNGYEALELGVGNMNVIKQ 139

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SK   G F    +    K+ EF+    D  LP+   FS  +F+ GQ + ++     KGF 
Sbjct: 140 SKNNIGNFIKRKLGFIHKIKEFKCT-SDCFLPIHHKFSCRHFSPGQNLFISSGIKNKGFC 198

Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179
           GAMK+ NF G   +HG  S +HRS GS    +    VF+NKKM   +G    V   N ++
Sbjct: 199 GAMKKWNFSGKNKSHGTESKAHRSLGSVSMGKTINIVFRNKKMNTHIGEKSLVKCSNNKL 258

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
             ++  + L+ +KG + G  KN  I + D+
Sbjct: 259 FRINSLKNLLFIKGTI-GGYKNKVIKISDA 287


>gi|161506873|ref|YP_001576827.1| 50S ribosomal protein L3 [Lactobacillus helveticus DPC 4571]
 gi|260102355|ref|ZP_05752592.1| 50S ribosomal protein L3 [Lactobacillus helveticus DSM 20075]
 gi|172048367|sp|A8YXK5|RL3_LACH4 RecName: Full=50S ribosomal protein L3
 gi|160347862|gb|ABX26536.1| 50S ribosomal protein L3 [Lactobacillus helveticus DPC 4571]
 gi|260083799|gb|EEW67919.1| 50S ribosomal protein L3 [Lactobacillus helveticus DSM 20075]
 gi|323465824|gb|ADX69511.1| 50S ribosomal protein L3 [Lactobacillus helveticus H10]
 gi|328463364|gb|EGF35037.1| 50S ribosomal protein L3 [Lactobacillus helveticus MTCC 5463]
          Length = 212

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/212 (35%), Positives = 119/212 (56%), Gaps = 5/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  +PVTV+      V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGRKVGMTQIFTKDGVLVPVTVVEATPNVVMQVKTVESDGYEAVQLGYQDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G       SPK+ + E R  +  D   VGS  +   F  G +V+VTG + G G+
Sbjct: 61  SNKPEKGHADKAKTSPKRFIREIRGVELKD-YEVGSEVTVDTFKEGDVVNVTGTSRGHGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR        THG S  HR  GS G   +  RV K K++ G MG  +VT++NL + 
Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSIIN--RVPKGKRLPGHMGMKKVTIENLVIE 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V   + ++++KG VPGA KNS I+V+ + K+
Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIVVKTASKA 207


>gi|269302431|gb|ACZ32531.1| ribosomal protein L3 [Chlamydophila pneumoniae LPCoLN]
          Length = 219

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 116/221 (52%), Gaps = 11/221 (4%)

Query: 1   MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58
           MRS   V+ +K GM  +++ +G  +  +V+ ++   V   +T + +GY ++Q+GA E   
Sbjct: 1   MRSHISVMGKKEGMIHIFDKDGSLVACSVIRVEPNVVAQIKTKESDGYFSLQMGAEEMNA 60

Query: 59  ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
                 K VSKP  G          + L E R  ++  + + +G  F    F     VDV
Sbjct: 61  PAHTITKRVSKPKLGHLRKAGGRVFRFLKEVRGSEEALNGVSLGDAFGLEVFEDVSSVDV 120

Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
            G++ GKGF G MK+  F G   +HG    HR  GS G R  PGR F   K    MG   
Sbjct: 121 RGISKGKGFQGVMKKFGFRGGPGSHGSGF-HRHAGSIGMRSTPGRCFPGSKRPSHMGAEN 179

Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VTVKNLEV+ VD ++ ++LVKG +PGA + S ++V+ S ++
Sbjct: 180 VTVKNLEVIKVDLEKKVLLVKGAIPGA-RGSIVIVKHSSRT 219


>gi|91082959|ref|XP_973661.1| PREDICTED: similar to Mitochondrial 39S ribosomal protein L3
           [Tribolium castaneum]
 gi|270007629|gb|EFA04077.1| hypothetical protein TcasGA2_TC014311 [Tribolium castaneum]
          Length = 355

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 117/221 (52%), Gaps = 15/221 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
           R+GV+ARK+G+  ++   G++I  T+L + + QV+ + T +             N    +
Sbjct: 93  RTGVIARKIGIYPMWLKNGKKISTTLLQVLDNQVIKYYTPESYNPPRPRAGRVSNRKGCL 152

Query: 50  QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
            +GA +      ++   G F    V PKK L  F V  D   LP G+  S  +F VG  V
Sbjct: 153 LLGAEQGDPSEFTREYCGIFKDSGVIPKKTLARFFVSPDA-ALPPGTSISALHFCVGNYV 211

Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
           DV G+TI +GF G MKRH F G+ A+HGV+ +HR  G+ G   + GRV+   KM G MG 
Sbjct: 212 DVRGLTIDRGFQGVMKRHGFKGMPASHGVTKTHRRGGNIGGGGEKGRVWPGTKMPGHMGN 271

Query: 170 NRVTVKNLEVVSVDDKRGLILVKGC-VPGAKKNSWILVRDS 209
               ++ L++  ++ K  ++ V G  +PGA  NS + + D+
Sbjct: 272 RYRILRALKIWRINTKYNVLYVSGQNIPGA-TNSIVYIYDT 311


>gi|239790528|dbj|BAH71819.1| ACYPI003905 [Acyrthosiphon pisum]
          Length = 375

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 108/222 (48%), Gaps = 15/222 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTL--------------DKNGYM 47
           R+G++ARKLG   ++   G+ +  T+L + +  V+ +                  K    
Sbjct: 109 RTGLIARKLGNYPMWLDNGKSVLSTLLQVIDNHVIKYIPPGEFNPPRKPYSCPNHKKPLG 168

Query: 48  AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
            + VGA  A  +  +K   G F    + PKK L  F V  +  L P G+    S+F  G 
Sbjct: 169 CLLVGAESADPQYFTKQYCGLFYREGMMPKKYLGRFMVSPEAALQP-GTPLLASHFRPGD 227

Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
            +DV G TI +GF G MKRH F G+ ATHGV+ SHR  G+ G   + GR+F   KM G M
Sbjct: 228 FIDVRGKTIDRGFQGVMKRHGFHGMPATHGVTKSHRRGGNVGHGGEKGRIFPGTKMPGHM 287

Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           G      K  E++ ++ K  +I +KG     K NS + + D+
Sbjct: 288 GNRYRLHKGAEILRINHKYNVIWIKGIASPGKTNSIVYLYDT 329


>gi|253795616|ref|YP_003038712.1| putative 50S ribosomal subunit protein L3 [Candidatus Hodgkinia
           cicadicola Dsem]
 gi|253739924|gb|ACT34259.1| putative 50S ribosomal subunit protein L3 [Candidatus Hodgkinia
           cicadicola Dsem]
          Length = 181

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 59/134 (44%), Positives = 84/134 (62%), Gaps = 6/134 (4%)

Query: 67  GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKR 126
           G  S V+V   ++ F+  V+  ++    GSV S  +       DV     GKGF+G +KR
Sbjct: 38  GLTSCVSV---RRAFKAHVKLPNEF---GSVLSADWLARAHATDVNARCKGKGFAGVIKR 91

Query: 127 HNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKR 186
           H F GLRA+HGVS++HR+ G+ G RQDPGRV+K  KMAGR+GG  VT+K ++VV++D   
Sbjct: 92  HGFSGLRASHGVSLAHRACGAIGSRQDPGRVWKGTKMAGRLGGGFVTLKRVKVVALDSFC 151

Query: 187 GLILVKGCVPGAKK 200
             + +KG VPG  +
Sbjct: 152 QRVTLKGPVPGGSR 165


>gi|227879243|ref|ZP_03997113.1| 50S ribosomal protein L3 [Lactobacillus crispatus JV-V01]
 gi|227894520|ref|ZP_04012325.1| 50S ribosomal protein L3 [Lactobacillus ultunensis DSM 16047]
 gi|256844429|ref|ZP_05549915.1| 50S ribosomal protein L3 [Lactobacillus crispatus 125-2-CHN]
 gi|256849183|ref|ZP_05554616.1| 50S ribosomal protein L3 [Lactobacillus crispatus MV-1A-US]
 gi|262047199|ref|ZP_06020157.1| 50S ribosomal protein L3 [Lactobacillus crispatus MV-3A-US]
 gi|293380377|ref|ZP_06626448.1| 50S ribosomal protein L3 [Lactobacillus crispatus 214-1]
 gi|295692160|ref|YP_003600770.1| 50S ribosomal protein l3 [Lactobacillus crispatus ST1]
 gi|315037530|ref|YP_004031098.1| 50S ribosomal protein L3 [Lactobacillus amylovorus GRL 1112]
 gi|325956003|ref|YP_004286613.1| 50S ribosomal protein L3 [Lactobacillus acidophilus 30SC]
 gi|227861137|gb|EEJ68786.1| 50S ribosomal protein L3 [Lactobacillus crispatus JV-V01]
 gi|227863679|gb|EEJ71100.1| 50S ribosomal protein L3 [Lactobacillus ultunensis DSM 16047]
 gi|256613507|gb|EEU18710.1| 50S ribosomal protein L3 [Lactobacillus crispatus 125-2-CHN]
 gi|256713959|gb|EEU28947.1| 50S ribosomal protein L3 [Lactobacillus crispatus MV-1A-US]
 gi|260572444|gb|EEX29006.1| 50S ribosomal protein L3 [Lactobacillus crispatus MV-3A-US]
 gi|290923060|gb|EFD99991.1| 50S ribosomal protein L3 [Lactobacillus crispatus 214-1]
 gi|295030266|emb|CBL49745.1| 50S ribosomal protein L3 [Lactobacillus crispatus ST1]
 gi|312275663|gb|ADQ58303.1| 50S ribosomal protein L3 [Lactobacillus amylovorus GRL 1112]
 gi|325332568|gb|ADZ06476.1| 50S ribosomal protein L3 [Lactobacillus acidophilus 30SC]
 gi|327182826|gb|AEA31273.1| 50S ribosomal protein L3 [Lactobacillus amylovorus GRL 1118]
          Length = 212

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/212 (35%), Positives = 119/212 (56%), Gaps = 5/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  +PVTV+      V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGRKVGMTQIFTKDGVLVPVTVVEATPNVVMQVKTVESDGYEAVQLGYQDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G       SPK+ + E R  +  D   VGS  +   F  G +V+VTG + G G+
Sbjct: 61  SNKPEKGHADKAKTSPKRFIREIRGVELKD-YEVGSEVTVDTFKEGDVVNVTGTSRGHGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR        THG S  HR  GS G   +  RV K K++ G MG  +VT++NL + 
Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSIIN--RVPKGKRLPGHMGVKKVTIENLVIE 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V   + ++++KG VPGA KNS I+V+ + K+
Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIVVKTASKA 207


>gi|168704969|ref|ZP_02737246.1| 50S ribosomal protein L3 [Gemmata obscuriglobus UQM 2246]
          Length = 302

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 126/280 (45%), Gaps = 70/280 (25%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVV------VHRTLDKNGYMAVQVGAG 54
           M  G++  K+GMT V+  EG+  PVTVL L  C V+            K+GY A+Q+G  
Sbjct: 1   MALGLIGYKVGMTQVFTPEGKAEPVTVLQLGPCPVLQIKYPSAEGGAAKDGYTAIQLGFK 60

Query: 55  EAKVKNVSKPMRGFFSS--------------------VNVSPKKKLFEFRV--------- 85
           + K K+ ++P +G  ++                     +  P+K + EFR+         
Sbjct: 61  DKKRKSATRPEQGHVAAGLKSKRKDARQKAGVVLPPKADCEPQKVIREFRIDLGGAFVQT 120

Query: 86  -------------------------QK-----DDDLLPVGSVFS-PSYFTVGQLVDVTGM 114
                                    QK     +D  L VG   +    F   Q VDV G 
Sbjct: 121 GTIKAGPAEASFKVERIKVSGEGATQKHELYTEDVTLKVGDKLTVDQVFKDVQAVDVIGT 180

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST---GCRQDPGRVFKNKKMAGRMGGNR 171
           T G+G++G MKRHNF G+ A HG    HR  GST      +  GR  K  + AG+ G  R
Sbjct: 181 TKGRGYTGVMKRHNFDGMPAAHGAKKVHRQAGSTASLASNRGTGRPKKGLRRAGQYGNER 240

Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           VT++NL VV VD +  L+L++G +PG    + ++VR + K
Sbjct: 241 VTIRNLTVVKVDVENNLMLIRGGIPGF-NGAVVMVRPTNK 279


>gi|58336630|ref|YP_193215.1| 50S ribosomal protein L3 [Lactobacillus acidophilus NCFM]
 gi|227903187|ref|ZP_04020992.1| 50S ribosomal protein L3 [Lactobacillus acidophilus ATCC 4796]
 gi|81311536|sp|Q5FM90|RL3_LACAC RecName: Full=50S ribosomal protein L3
 gi|58253947|gb|AAV42184.1| 50S ribosomal protein L3 [Lactobacillus acidophilus NCFM]
 gi|227868992|gb|EEJ76413.1| 50S ribosomal protein L3 [Lactobacillus acidophilus ATCC 4796]
          Length = 212

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/212 (35%), Positives = 119/212 (56%), Gaps = 5/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  +PVTV+      V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGRKVGMTQIFTKDGILVPVTVVEATPNVVMQVKTVESDGYEAVQLGYQDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G       SPK+ + E R  +  D   VGS  +   F  G +V+VTG + G G+
Sbjct: 61  SNKPEKGHADKAKTSPKRFIREIRGVELKD-YEVGSEVTVDTFKEGDVVNVTGTSRGHGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR        THG S  HR  GS G   +  RV K K++ G MG  +VT++NL + 
Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSIIN--RVPKGKRLPGHMGVKKVTIENLVIE 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V   + ++++KG VPGA KNS I+V+ + K+
Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIVVKTASKA 207


>gi|308801038|ref|XP_003075300.1| putative 50S ribosomal protein L3 (ISS) [Ostreococcus tauri]
 gi|116061854|emb|CAL52572.1| putative 50S ribosomal protein L3 (ISS) [Ostreococcus tauri]
          Length = 338

 Score =  108 bits (270), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 70/160 (43%), Positives = 91/160 (56%), Gaps = 5/160 (3%)

Query: 39  RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVF 98
           +T   +GY AVQVG    K + ++KP  G          + L EFR+ +D     VG+  
Sbjct: 159 KTEATDGYNAVQVGYDAVKERQLTKPEAGHCKKAGAPALRHLEEFRL-RDAPEYEVGAKI 217

Query: 99  SPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRV 157
           + S  F  G  VDV G +IGKGF GA+KR+ F     THG S SHR HGS G   +PGR+
Sbjct: 218 NVSELFKEGDKVDVRGRSIGKGFQGAVKRYGFSRGLMTHG-SKSHRQHGSIGSGTNPGRI 276

Query: 158 FKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197
           +  K+M G MG   VT+K L V+SV+D    I+VKG VPG
Sbjct: 277 YPGKRMHGHMGDEMVTIKGLTVMSVEDD--CIIVKGNVPG 314


>gi|70924866|ref|XP_735214.1| 50S ribosomal protein L3 [Plasmodium chabaudi chabaudi]
 gi|56508675|emb|CAH83308.1| 50S ribosomal protein L3, putative [Plasmodium chabaudi chabaudi]
          Length = 237

 Score =  108 bits (270), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 114/216 (52%), Gaps = 4/216 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++  K+G   +++I G +  VTV+ +DNC V+  + + KNGY A++VG G   V   
Sbjct: 11  RTGLLGYKVGCMSIWDIWGVKHAVTVVKIDNCYVLNQKNITKNGYEALEVGIGNMNVIKQ 70

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SK   G +    +    K+ EF+    D  LPV   FS  +F+ GQ + ++     KGF 
Sbjct: 71  SKNNIGNYIKRRLGFIHKIREFKCT-SDCFLPVQHKFSARHFSPGQNLFISSSIKNKGFC 129

Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179
           GAM++ NF G   +HG  S +HRS GS    +    VF+NKKM   +G    V   N ++
Sbjct: 130 GAMQKWNFSGKNQSHGTESKAHRSLGSVSMGKTINIVFRNKKMNTHIGEKSLVKCSNNKL 189

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             ++  + L+ +KG + G  KN  I + D+   A N
Sbjct: 190 FRINSLKNLLFIKGTI-GGYKNKIIKISDAKGRAFN 224


>gi|255348905|ref|ZP_05380912.1| 50S ribosomal protein L3 [Chlamydia trachomatis 70]
 gi|255503445|ref|ZP_05381835.1| 50S ribosomal protein L3 [Chlamydia trachomatis 70s]
 gi|255507124|ref|ZP_05382763.1| 50S ribosomal protein L3 [Chlamydia trachomatis D(s)2923]
 gi|289525573|emb|CBJ15051.1| LSU ribosomal protein L3P [Chlamydia trachomatis Sweden2]
 gi|296435133|gb|ADH17311.1| 50S ribosomal protein L3 [Chlamydia trachomatis E/150]
 gi|296438853|gb|ADH21006.1| 50S ribosomal protein L3 [Chlamydia trachomatis E/11023]
          Length = 221

 Score =  108 bits (270), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 79/216 (36%), Positives = 110/216 (50%), Gaps = 10/216 (4%)

Query: 1   MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58
           MRS   ++ +K GM  V++  G  +  +V+ +D   V   +T   +GY AVQ+GA   + 
Sbjct: 1   MRSQLSLIGKKEGMMHVFDKNGNLVACSVISVDANVVAQLKTASSDGYNAVQMGADVVQA 60

Query: 59  ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
                 K  SK + G F        + L E  V ++    + +G  F    F     VD+
Sbjct: 61  PEKTIEKRFSKALLGHFKKSGGRACRVLKEVVVSEEAVQSVSLGDEFGLEIFDGVSNVDI 120

Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
            G++ GKGF G MK+  F G   +HG    HR  GSTG R  PGR F   K    MG +R
Sbjct: 121 CGISKGKGFQGVMKKFGFRGGPKSHGSGF-HRHAGSTGMRSTPGRCFPGSKRPSHMGCDR 179

Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVR 207
           VTVKNLEVV VD  R ++LVKG +PG K +  ++ R
Sbjct: 180 VTVKNLEVVKVDLDRKVMLVKGAIPGFKGSVVVVKR 215


>gi|321468355|gb|EFX79340.1| hypothetical protein DAPPUDRAFT_212601 [Daphnia pulex]
          Length = 374

 Score =  108 bits (270), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 113/225 (50%), Gaps = 20/225 (8%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE------ 55
           RSGV+AR +G   +++ +G +I  TVLH+ +  V+  R +    Y+    GA        
Sbjct: 111 RSGVIARNIGRQQMWDKDGNKIVCTVLHVLDNHVI--RYIPPEEYVKTSRGAIHFKNKTP 168

Query: 56  -------AKVKNVSKPMRGF---FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105
                  A+  N  K  R +   F+ V + PKK L  F +  +  L P   + +  +F V
Sbjct: 169 LGCLVVGAEATNPEKFTRQYCNLFAEVGLMPKKTLSRFIITPNAALPPCTPI-TAGHFLV 227

Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
           GQ VDV G T+  GF G +KR  F G  A+HG +  HR  G+ G  +D  RV+   KM G
Sbjct: 228 GQAVDVYGKTVDHGFQGVVKRWGFKGGPASHGATKFHRRGGTIGTGRDKARVWPGTKMPG 287

Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
            MG  R   + L ++ ++ K  +I VKG VPGA  NS + + D+ 
Sbjct: 288 HMGSERRYNRGLMIMRINMKYNVIYVKGTVPGA-TNSIVRIFDTL 331


>gi|68066851|ref|XP_675399.1| 50S ribosomal protein L3 [Plasmodium berghei strain ANKA]
 gi|56494563|emb|CAH99831.1| 50S ribosomal protein L3, putative [Plasmodium berghei]
          Length = 335

 Score =  108 bits (269), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 114/216 (52%), Gaps = 4/216 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++  K+G   +++I G +  VTV+ +DNC V+  + + KNGY A++VG G   V   
Sbjct: 74  RTGLLGYKVGCMSIWDIWGVKHAVTVVKIDNCYVLNQKNITKNGYEALEVGIGNMNVIKQ 133

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SK   G +    +    K+ EF+    D  LPV   FS  +F+ GQ + ++     KGF 
Sbjct: 134 SKNNIGNYIKRRLGFIHKIREFKCT-SDCFLPVQHKFSARHFSPGQNLFISSSIKNKGFC 192

Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179
           GAMK+ NF G   +HG  S +HRS GS    +    VF+NKKM   +G    V   N ++
Sbjct: 193 GAMKKWNFSGKNKSHGTESKAHRSLGSVSMGKTINIVFRNKKMNTHIGEKSLVKCSNNKL 252

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             ++  + L+ +KG + G  KN  I + D+   A N
Sbjct: 253 FRINSLKNLLFIKGSI-GGYKNKVIKISDAKGRAFN 287


>gi|133117|sp|P18665|RM03_RAT RecName: Full=39S ribosomal protein L3, mitochondrial; Short=L3mt;
           Short=MRP-L3
          Length = 347

 Score =  108 bits (269), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 115/222 (51%), Gaps = 10/222 (4%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRT-LDKNGYMA-VQVGAGEAKVK 59
           R G++A KLGM  ++  +G++  VT+L + +C V+ +    D NG  A + VG       
Sbjct: 96  RVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKTATLTVGGKTGSRL 155

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             +  +  F+  + + PK+    F V  D+ ++  G+    ++F  GQ VDVT  TIGKG
Sbjct: 156 YKANSILEFYRDLGLPPKQTTKIFHVT-DNAVIKQGTPLYAAHFRPGQYVDVTAKTIGKG 214

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           F G MKR  F G  A+HG + +HR  G  STG   D  RV+   KM G+MG    TV  L
Sbjct: 215 FQGVMKRWGFKGQPASHGQTKTHRRPGAISTG---DIARVWPGTKMPGKMGNQNRTVYGL 271

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           +V  V+ K  +I V G V    +N  + ++DS   A    GK
Sbjct: 272 KVWRVNTKHNIIYVNGSV--GHRNCLVKIKDSTLPAYKDLGK 311


>gi|326922075|ref|XP_003207277.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like [Meleagris
           gallopavo]
          Length = 348

 Score =  108 bits (269), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 112/211 (53%), Gaps = 5/211 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R GVVA KLGM  ++   G++  VT+L + +C V+ + + + +G    ++  G   V  
Sbjct: 96  VRVGVVAVKLGMMPIWTKSGKKHAVTLLKVQDCHVLKYISKEDSGGKRAKLLVGGKNVSP 155

Query: 61  V--SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
              S+     F    V  K+K+  F V  DD ++  G+    ++F  GQ+VDVT  TIGK
Sbjct: 156 FFKSEAEMEIFREAGVPRKQKVTSFDVT-DDAIIKPGTPLYAAHFRPGQIVDVTAKTIGK 214

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G +KR  F G  A+HG + +HR  G+    +   RVF  KKM G+MG    T   L+
Sbjct: 215 GFQGVVKRWGFKGQPASHGQTKTHRRPGAISTNKV-SRVFPGKKMPGKMGNIYRTSFALK 273

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           V  ++ K  +I V G VPG   N  + VRD+
Sbjct: 274 VWRINTKHDIIYVHGSVPG-HTNCLVKVRDT 303


>gi|157134546|ref|XP_001656360.1| Mitochondrial 39S ribosomal protein L3 [Aedes aegypti]
 gi|108870456|gb|EAT34681.1| Mitochondrial 39S ribosomal protein L3 [Aedes aegypti]
          Length = 372

 Score =  107 bits (268), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 110/222 (49%), Gaps = 15/222 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH--------------RTLDKNGYM 47
           R+GV+ARK+G   ++  +G +I  T+L + +  VV +              +   KN Y 
Sbjct: 105 RTGVIARKIGQYPLWMKDGTKIRTTLLQVIDNHVVKYIPPAEFNPPLEPRQKKNWKNPYG 164

Query: 48  AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
            + VGA        +K   G F    V PK+ L  F V  +  LLP G+  + ++F VG 
Sbjct: 165 CLLVGAQSQDPSIFTKEYCGLFKDSGVLPKQHLCRFIVSPEAQLLP-GTPLNVTHFKVGD 223

Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
            VDV G T+  GF G +KRH F G+ A+HGV+ +HR  G+ G   +  RV+   KM G M
Sbjct: 224 YVDVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRKPGNIGAGGEKARVWPGTKMPGHM 283

Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           G     ++ L++  ++ K  ++ V+G       N  + + D+
Sbjct: 284 GNRWRNLRGLKIWRINTKYNVMWVQGSNIAGDTNGLVYIYDT 325


>gi|221061915|ref|XP_002262527.1| 50S ribosomal protein L3 [Plasmodium knowlesi strain H]
 gi|193811677|emb|CAQ42405.1| 50S ribosomal protein L3, putative [Plasmodium knowlesi strain H]
          Length = 336

 Score =  107 bits (268), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 116/216 (53%), Gaps = 4/216 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K+G   ++++ G +  VTV  ++NC V+  + + KNGY A++VG G   V   
Sbjct: 75  RTGLLAYKVGCMSIWDVWGVKHAVTVAKVNNCYVLNQKNITKNGYEALEVGIGNMNVIKQ 134

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SK   G +    +    K+ EF+    D  LPV   FS  +F+ GQ + ++     KGF 
Sbjct: 135 SKNNIGNYIKRKLGFIHKIKEFKCT-HDCFLPVQHKFSVRHFSPGQNLFISSTVKNKGFC 193

Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGG-NRVTVKNLEV 179
           GAMK+ NF G  A+HG  S +HRS GS    +    VF++KKM   +G  N V   N ++
Sbjct: 194 GAMKKWNFSGKNASHGTESKAHRSLGSVSMGKTVNIVFRHKKMNTHIGEKNLVKCSNNKL 253

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             ++  + L+ +KG + G  KN  I + D+   A N
Sbjct: 254 FRINSLQNLLFIKGSI-GGYKNKIIKISDAKGRAFN 288


>gi|82593828|ref|XP_725167.1| ribosomal protein L3 [Plasmodium yoelii yoelii str. 17XNL]
 gi|23480072|gb|EAA16732.1| ribosomal protein L3, putative [Plasmodium yoelii yoelii]
          Length = 335

 Score =  107 bits (268), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 114/216 (52%), Gaps = 4/216 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++  K+G   +++I G +  VTV+ +DNC V+  + + KNGY A++VG G   V   
Sbjct: 74  RTGLLGYKVGCMSLWDIWGVKHAVTVVKIDNCYVLNQKNITKNGYEALEVGIGNMNVIKQ 133

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SK   G +    +    K+ EF+    D  LPV   FS  +F+ GQ + ++     KGF 
Sbjct: 134 SKNNIGNYIKRRLGFIHKIREFKCT-SDCFLPVQHKFSARHFSPGQNLFISSSIKNKGFC 192

Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179
           GAMK+ NF G   +HG  S +HRS GS    +    VF+NKKM   +G    V   N ++
Sbjct: 193 GAMKKWNFSGKNKSHGTESKAHRSLGSVSMGKTINIVFRNKKMNTHIGEKSLVKCSNNKL 252

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             ++  + L+ +KG + G  KN  I + D+   A N
Sbjct: 253 FRINSLKNLLFIKGSI-GGYKNKVIKISDAKGRAFN 287


>gi|15605257|ref|NP_220043.1| 50S ribosomal protein L3 [Chlamydia trachomatis D/UW-3/CX]
 gi|76789265|ref|YP_328351.1| 50S ribosomal protein L3 [Chlamydia trachomatis A/HAR-13]
 gi|237802957|ref|YP_002888151.1| 50S ribosomal protein L3 [Chlamydia trachomatis B/Jali20/OT]
 gi|237804879|ref|YP_002889033.1| 50S ribosomal protein L3 [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255311346|ref|ZP_05353916.1| 50S ribosomal protein L3 [Chlamydia trachomatis 6276]
 gi|255317647|ref|ZP_05358893.1| 50S ribosomal protein L3 [Chlamydia trachomatis 6276s]
 gi|7674297|sp|O84533|RL3_CHLTR RecName: Full=50S ribosomal protein L3
 gi|109893421|sp|Q3KLG9|RL3_CHLTA RecName: Full=50S ribosomal protein L3
 gi|3328965|gb|AAC68129.1| L3 Ribosomal Protein [Chlamydia trachomatis D/UW-3/CX]
 gi|76167795|gb|AAX50803.1| LSU ribosomal protein L3P [Chlamydia trachomatis A/HAR-13]
 gi|231273179|emb|CAX10092.1| LSU ribosomal protein L3P [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231274191|emb|CAX10985.1| LSU ribosomal protein L3P [Chlamydia trachomatis B/Jali20/OT]
 gi|296436061|gb|ADH18235.1| 50S ribosomal protein L3 [Chlamydia trachomatis G/9768]
 gi|296436989|gb|ADH19159.1| 50S ribosomal protein L3 [Chlamydia trachomatis G/11222]
 gi|296437922|gb|ADH20083.1| 50S ribosomal protein L3 [Chlamydia trachomatis G/11074]
 gi|297140422|gb|ADH97180.1| 50S ribosomal protein L3 [Chlamydia trachomatis G/9301]
 gi|297748658|gb|ADI51204.1| LSU ribosomal protein L3P [Chlamydia trachomatis D-EC]
 gi|297749538|gb|ADI52216.1| LSU ribosomal protein L3P [Chlamydia trachomatis D-LC]
          Length = 221

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/216 (36%), Positives = 110/216 (50%), Gaps = 10/216 (4%)

Query: 1   MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58
           MRS   ++ +K GM  V++  G  +  +V+ +D   V   +T   +GY AVQ+GA   + 
Sbjct: 1   MRSQLSLIGKKEGMMHVFDKNGNLVACSVISVDANVVAQLKTASSDGYNAVQMGADVVQA 60

Query: 59  ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
                 K  SK + G F        + L E  V ++    + +G  F    F     VD+
Sbjct: 61  PEKTIEKRFSKALLGHFKKSGGRVCRVLKEVVVSEEAVQSVSLGDEFGLEIFDGVSNVDI 120

Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
            G++ GKGF G MK+  F G   +HG    HR  GSTG R  PGR F   K    MG +R
Sbjct: 121 CGISKGKGFQGVMKKFGFRGGPKSHGSGF-HRHAGSTGMRSTPGRCFPGSKRPSHMGCDR 179

Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVR 207
           VTVKNLEVV VD  R ++LVKG +PG K +  ++ R
Sbjct: 180 VTVKNLEVVKVDLDRKVMLVKGAIPGFKGSVVVVKR 215


>gi|21450877|gb|AAK43985.2|AF370170_1 putative ribosomal protein L3 [Arabidopsis thaliana]
          Length = 134

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 51/93 (54%), Positives = 69/93 (74%), Gaps = 1/93 (1%)

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF G MKRH F G+ A+HG S+SHRS GSTG R  PG+VFK +KMAGRMG ++ TVKN+
Sbjct: 1   KGFQGCMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGADQRTVKNV 60

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
            V  +D  R L+ V+G VPGA+ N ++ ++D++
Sbjct: 61  WVYKIDPARNLMWVRGQVPGAEGN-FVFIKDAW 92


>gi|15835429|ref|NP_297188.1| 50S ribosomal protein L3 [Chlamydia muridarum Nigg]
 gi|270285609|ref|ZP_06195003.1| 50S ribosomal protein L3 [Chlamydia muridarum Nigg]
 gi|270289619|ref|ZP_06195921.1| 50S ribosomal protein L3 [Chlamydia muridarum Weiss]
 gi|301337005|ref|ZP_07225207.1| 50S ribosomal protein L3 [Chlamydia muridarum MopnTet14]
 gi|13878709|sp|Q9PJL4|RL3_CHLMU RecName: Full=50S ribosomal protein L3
 gi|7190843|gb|AAF39617.1| ribosomal protein L3 [Chlamydia muridarum Nigg]
          Length = 221

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/216 (36%), Positives = 109/216 (50%), Gaps = 10/216 (4%)

Query: 1   MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58
           MRS   ++ +K GM  V++  G  +  +V+ ++   V   +T   +GY AVQ+GA   K 
Sbjct: 1   MRSQLSLIGKKEGMMHVFDKNGNLVACSVISIEPNVVAQLKTASSDGYNAVQMGADAVKA 60

Query: 59  ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
                 K  SK + G F        + L E  V ++    + +G  F    F     VDV
Sbjct: 61  PEKTIEKRFSKALLGHFKKSGGCAFRVLKEVVVSEEAVQSVSLGDEFGVEIFDGVSNVDV 120

Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
            G++ GKGF G MK+  F G   +HG    HR  GS G R  PGR F   K    MG +R
Sbjct: 121 CGISKGKGFQGVMKKFGFRGGPKSHGSGF-HRHAGSIGMRSTPGRCFPGSKRPSHMGCDR 179

Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVR 207
           VTVKNLEVV VD  R ++LVKG +PG K +  ++ R
Sbjct: 180 VTVKNLEVVKVDLDRKVMLVKGAIPGFKGSVVVVKR 215


>gi|166154743|ref|YP_001654861.1| 50S ribosomal protein L3 [Chlamydia trachomatis 434/Bu]
 gi|166155618|ref|YP_001653873.1| 50S ribosomal protein L3 [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301336017|ref|ZP_07224261.1| 50S ribosomal protein L3 [Chlamydia trachomatis L2tet1]
 gi|226725148|sp|B0B8A2|RL3_CHLT2 RecName: Full=50S ribosomal protein L3
 gi|226725150|sp|B0BCG7|RL3_CHLTB RecName: Full=50S ribosomal protein L3
 gi|165930731|emb|CAP04228.1| LSU ribosomal protein L3P [Chlamydia trachomatis 434/Bu]
 gi|165931606|emb|CAP07182.1| LSU ribosomal protein L3P [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 221

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 109/216 (50%), Gaps = 10/216 (4%)

Query: 1   MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58
           MRS   ++ +K GM  V++  G  +  +V+ +D   V   +T   +GY AVQ+GA   + 
Sbjct: 1   MRSQLSLIGKKEGMMHVFDKNGNLVACSVISVDANVVAQLKTASSDGYNAVQIGADVVQA 60

Query: 59  ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
                 K  SK + G F        + L E  V ++    + +G  F    F     VD+
Sbjct: 61  PEKTIEKRFSKALLGHFKKSGGRACRVLKEVVVSEEAVQSVSLGDEFGLEIFDGVSNVDI 120

Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
            G++ GKGF G MK+  F G   +HG    HR  GS G R  PGR F   K    MG +R
Sbjct: 121 CGISKGKGFQGVMKKFGFRGGPKSHGSGF-HRHAGSIGMRSTPGRCFPGSKRPSHMGCDR 179

Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVR 207
           VTVKNLEVV VD  R ++LVKG +PG K +  ++ R
Sbjct: 180 VTVKNLEVVKVDLDRKVMLVKGAIPGFKGSVVVVKR 215


>gi|227509931|ref|ZP_03939980.1| 50S ribosomal protein L3 [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227512864|ref|ZP_03942913.1| 50S ribosomal protein L3 [Lactobacillus buchneri ATCC 11577]
 gi|227522992|ref|ZP_03953041.1| 50S ribosomal protein L3 [Lactobacillus hilgardii ATCC 8290]
 gi|227083864|gb|EEI19176.1| 50S ribosomal protein L3 [Lactobacillus buchneri ATCC 11577]
 gi|227089810|gb|EEI25122.1| 50S ribosomal protein L3 [Lactobacillus hilgardii ATCC 8290]
 gi|227190537|gb|EEI70604.1| 50S ribosomal protein L3 [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 211

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/214 (36%), Positives = 116/214 (54%), Gaps = 9/214 (4%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ +K+GMT V+   G  +PVTV+ +    ++  +T + +GY AVQ+G  + +    
Sbjct: 3   RKGILGKKVGMTQVFTENGELVPVTVVEVTPNVIMQIKTAENDGYDAVQLGYADKRAVLT 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP +G     N +PK+ + E    KD +L    V        F  G +VDVTG T G G
Sbjct: 63  NKPEQGHAKKANTTPKRFIKEI---KDVELGDYKVAEEVKADIFKPGDIVDVTGTTKGHG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           + G + +        THG S  HR  GS G   +  RV    K+ GRMG   VT++NLEV
Sbjct: 120 YQGNIHKDGQSRGPETHG-SRYHRRPGSLGVIIN--RVVPGMKLPGRMGNKTVTIQNLEV 176

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           VS D+   +IL+KG VPGA K S+I +R + + A
Sbjct: 177 VSTDNDNNVILIKGNVPGANK-SFITIRTAVRGA 209


>gi|11465422|ref|NP_045187.1| ribosomal protein L3 [Cyanidium caldarium]
 gi|42559313|sp|Q9TLT2|RK3_CYACA RecName: Full=50S ribosomal protein L3, chloroplastic
 gi|6466325|gb|AAF12907.1|AF022186_29 unknown [Cyanidium caldarium]
          Length = 215

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 101/197 (51%), Gaps = 3/197 (1%)

Query: 9   KLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGF 68
           KLGMT + +  G  +PVT++      V+   T   N    + +  G       +KP  G+
Sbjct: 12  KLGMTQILDNFGNLVPVTIVSQPKPCVITRVTTSLNSQQKLIIQIGCYSDFRANKPTIGY 71

Query: 69  FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
           F   +V   + L EF+  K+++   VG           QLV V+  TIGKGF+G  K+H 
Sbjct: 72  FKKQSVPNLRYLHEFQTYKNNEY-QVGKSLDLKELD-QQLVQVSAYTIGKGFAGYQKKHK 129

Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188
           F     +HG S SHR  GS G    PGRVF   KMAGR+G +R ++KNL V+ VD    L
Sbjct: 130 FSRGAMSHG-SKSHRRPGSIGAGTTPGRVFPGVKMAGRLGFSRRSIKNLLVLKVDLTNKL 188

Query: 189 ILVKGCVPGAKKNSWIL 205
            L+KG VPG   N  ++
Sbjct: 189 FLLKGSVPGKYGNLLLV 205


>gi|313123111|ref|YP_004033370.1| 50S ribosomal protein l3 [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312279674|gb|ADQ60393.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 198

 Score =  106 bits (264), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 114/203 (56%), Gaps = 7/203 (3%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT ++  +G  +PVTV+      V+  +T++ +GY AVQ+G  + +    +KP +G    
Sbjct: 1   MTQIFTKDGVLVPVTVIEATPNVVMQVKTVENDGYEAVQLGYQDKREVLSNKPEKGHADK 60

Query: 72  VNVSPKKKLFEFR-VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
              SPK+ + E R V+  D    VGS  +   F  G +V+VTG + G G+ G +KRH+  
Sbjct: 61  AKTSPKRFIRELRGVELSD--YEVGSEVTVETFKEGDVVNVTGTSRGHGYQGNIKRHHQS 118

Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
               THG S  HR  GS G   +  RV K KK+ G MG   VT++NL V  V   + +++
Sbjct: 119 RGPETHG-SRYHRIPGSMGSIIN--RVPKGKKLPGHMGVKTVTIENLVVEKVVADKNVLM 175

Query: 191 VKGCVPGAKKNSWILVRDSFKSA 213
           +KG VPGA KNS I+V+ S K++
Sbjct: 176 IKGNVPGA-KNSLIVVKSSAKAS 197


>gi|156553318|ref|XP_001600461.1| PREDICTED: similar to Mitochondrial 39S ribosomal protein L3
           [Nasonia vitripennis]
          Length = 375

 Score =  106 bits (264), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 110/230 (47%), Gaps = 14/230 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQ----------- 50
           R GV+ARK+G+  ++  +G+++  T+  + +  V+ +   ++   M  Q           
Sbjct: 105 RVGVLARKIGIVPMWMKDGKKVLTTMFQVADNHVIKYIPPEEYKPMITQKKNPLPRNTGC 164

Query: 51  --VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQL 108
             VGA     +  +K   G F+   V PK+ L  F V  +  L P   +F+ +++ +GQ 
Sbjct: 165 LLVGADSCDPQLFTKEYCGLFNEAGVMPKRLLARFHVSPEGALQPGTPLFA-THYKIGQY 223

Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
           +D+ G TI +GF G MKR  F G+ A+HGV+ +HR  G+ G      RV    K+ G MG
Sbjct: 224 IDIRGKTIDRGFQGVMKRWGFHGMPASHGVTKTHRRPGNIGSGGKKARVMPGTKLPGHMG 283

Query: 169 GNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
                VK   +V ++ +  +I V G     + NS +   D+      CK 
Sbjct: 284 NRYRIVKAQRIVRINTRYNVIWVLGQASAGETNSLVQFYDTIVPLKTCKA 333


>gi|329942411|ref|ZP_08291221.1| ribosomal L3 family protein [Chlamydophila psittaci Cal10]
 gi|328815321|gb|EGF85309.1| ribosomal L3 family protein [Chlamydophila psittaci Cal10]
          Length = 208

 Score =  106 bits (264), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/195 (35%), Positives = 102/195 (52%), Gaps = 8/195 (4%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV------KNVSKPM 65
           M  V++ +G  +  +V+ + +  V   +    +GY A+Q+GA E  V      K V+KP 
Sbjct: 1   MIHVFDKDGNLVACSVISMSSNVVTQIKVDSTDGYNAIQMGANEINVPEKTLQKRVNKPS 60

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
            G F        + L E R+ ++  + + +GS F    F     VD++G++ GKGF G M
Sbjct: 61  LGHFKKSGSRVFRSLKEVRLSEEAVNEVSLGSEFGLEVFESVSSVDISGVSKGKGFQGVM 120

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR  F G   +HG    HR  GS G R  PGR F   K    MG   VTVKNLEV+ VD 
Sbjct: 121 KRFGFRGGPQSHGSGF-HRHAGSIGMRSTPGRCFPGSKRPSHMGTVNVTVKNLEVIKVDL 179

Query: 185 KRGLILVKGCVPGAK 199
           ++ ++LVKG +PG +
Sbjct: 180 EKKVLLVKGAIPGPR 194


>gi|156095889|ref|XP_001613979.1| 50S ribosomal protein L3 [Plasmodium vivax SaI-1]
 gi|148802853|gb|EDL44252.1| 50S ribosomal protein L3, putative [Plasmodium vivax]
          Length = 336

 Score =  106 bits (264), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 115/216 (53%), Gaps = 4/216 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K+G   ++++ G +  VTV  +++C V+  + + KNGY A+++G G   V   
Sbjct: 75  RTGLLAYKVGCMSIWDVWGVKHAVTVAKINHCYVLNQKNITKNGYEALEIGIGNMNVVKQ 134

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SK   G +    +    K+ EF+    D  LPV   FS  +F+ GQ + ++     KGF 
Sbjct: 135 SKNNIGNYIKRKLGFIHKIKEFKCT-SDCFLPVQHKFSARHFSPGQNLFISSTIKSKGFC 193

Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179
           GAMK+ NF G  A+HG  S +HRS GS    +    VF+NKKM   +G    V   N ++
Sbjct: 194 GAMKKWNFSGKNASHGTESKAHRSLGSVSMGKTVNIVFRNKKMNTHIGEKTLVKCSNNKL 253

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             ++  + L+ +KG + G  KN  I + D+   A N
Sbjct: 254 FRINSLQNLLFIKGPI-GGYKNKIIKISDAKGRAFN 288


>gi|312375540|gb|EFR22896.1| hypothetical protein AND_14042 [Anopheles darlingi]
          Length = 1032

 Score =  105 bits (263), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 15/222 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH--------------RTLDKNGYM 47
           R+GV+A+K+G   ++   G +I  T+L +   +VV +              R   +  Y 
Sbjct: 759 RTGVIAKKIGQYPLWTRNGTKIRTTLLQIVENEVVKYIPPEEYRPAQEPRQRRNWRRPYG 818

Query: 48  AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
            + VGA        +K   G F    V PK+ L  F V  +  L P G+  +  +F VG 
Sbjct: 819 CLLVGAENGDPSLFTKEYAGLFQHTGVLPKQHLCRFLVSPEAQL-PPGTALTVDHFRVGD 877

Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
            VDV G T+ +GF G +KRH F G+  THGV+ +HR  G+ G      RV+   KM G M
Sbjct: 878 YVDVRGKTVDRGFQGVVKRHGFKGMPKTHGVTKTHRRPGNIGAGGQKARVWPGTKMPGHM 937

Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           G     ++ L+V+ ++ +  ++ V+        N  + V D+
Sbjct: 938 GNRWRVLRGLQVLRINRQYNVMWVRSSNIAGSTNGLVYVYDT 979


>gi|293372118|ref|ZP_06618509.1| 50S ribosomal protein L3 [Bacteroides ovatus SD CMC 3f]
 gi|292632910|gb|EFF51497.1| 50S ribosomal protein L3 [Bacteroides ovatus SD CMC 3f]
          Length = 142

 Score =  104 bits (260), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 61/144 (42%), Positives = 84/144 (58%), Gaps = 4/144 (2%)

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M G F    V+PK+ L EF+  + +  L +G   +   F     VDV G + GKGF G +
Sbjct: 1   MMGHFKRAGVTPKRHLAEFKEFETE--LNLGDTITVEMFNDASFVDVVGTSKGKGFQGVV 58

Query: 125 KRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           KRH FGG+ +ATHG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V 
Sbjct: 59  KRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKVI 118

Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207
               L+LVKG +PG  K S +L+ 
Sbjct: 119 ADHNLLLVKGSIPGC-KGSIVLIE 141


>gi|158296418|ref|XP_316827.4| AGAP000857-PA [Anopheles gambiae str. PEST]
 gi|157015287|gb|EAA12062.4| AGAP000857-PA [Anopheles gambiae str. PEST]
          Length = 373

 Score =  104 bits (260), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 15/223 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD--------------KNGYM 47
           R+GV+A+K+G   ++  +G++I  T+L + + +VV +   +              +  Y 
Sbjct: 100 RTGVIAKKIGQYPLWTKDGQKIRTTLLQIVDNEVVKYIPPEEYRPAQEPRQSRNWRKPYG 159

Query: 48  AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
            + VGA        +K   G F    V PKK L  F V  +  L P G+  + S+F VG 
Sbjct: 160 CLLVGAEHGDPSLFTKEYAGLFHESGVLPKKHLCRFIVSPEAQL-PSGTALTVSHFRVGD 218

Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
            VDV G+T+ +GF G +KRH F G+  +HGV+ +HR  G+ G   +  RV+   ++ G M
Sbjct: 219 FVDVRGLTVDRGFQGVVKRHGFKGMPKSHGVTKTHRRPGNIGAGGNKARVWPGTRLPGHM 278

Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           G     ++ L ++ ++ +  ++ V G       N  + + D+ 
Sbjct: 279 GNRWRVLRGLRILRINPQYNVMWVMGSNIAGNTNGIVYIYDTI 321


>gi|29839861|ref|NP_828967.1| 50S ribosomal protein L3 [Chlamydophila caviae GPIC]
 gi|42559611|sp|Q824Q1|RL3_CHLCV RecName: Full=50S ribosomal protein L3
 gi|29834208|gb|AAP04845.1| ribosomal protein L3 [Chlamydophila caviae GPIC]
          Length = 221

 Score =  104 bits (260), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 112/218 (51%), Gaps = 10/218 (4%)

Query: 1   MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58
           MRS   ++ +K GM  V++ +G  +  +V+ + +  V   +    +GY A+Q+GA E  V
Sbjct: 1   MRSQLSLMGKKEGMIHVFDKDGNLVACSVISVGSNVVTQIKVDSTDGYNAIQMGANEINV 60

Query: 59  ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
                 K ++KP  G            L E R+ +D  + + +G+ F          VD+
Sbjct: 61  PEKTLEKRMNKPELGHLKKSGSRVFGLLKEVRLSEDAINEVSLGNEFGLEVLEDISSVDI 120

Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
           +G++ GKGF G MKR  F G   THG    HR  GS G R  PGR F   K    MG   
Sbjct: 121 SGVSKGKGFQGVMKRFGFRGGPKTHGSGF-HRHAGSIGMRSTPGRCFPGSKRPSHMGTVN 179

Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           VTVKNLEVV +D ++ ++LVKG +PG + +  ++ R S
Sbjct: 180 VTVKNLEVVKIDLEKKVLLVKGAIPGPRGSVVVIRRSS 217


>gi|293553879|ref|ZP_06674485.1| ribosomal protein L3 [Enterococcus faecium E1039]
 gi|291601931|gb|EFF32177.1| ribosomal protein L3 [Enterococcus faecium E1039]
          Length = 106

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/107 (56%), Positives = 74/107 (69%), Gaps = 3/107 (2%)

Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
           G ++DVTG T GKGF G +KRH        HG S  HR  GS G    P RVFKNK++AG
Sbjct: 2   GDIIDVTGTTKGKGFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGP-VAPNRVFKNKRLAG 59

Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           RMGGNRVT++NLEVV VD +R +IL+KG VPGAKK S I ++ + K+
Sbjct: 60  RMGGNRVTIQNLEVVRVDAERNVILIKGNVPGAKK-SLITIKSAVKA 105


>gi|213423716|ref|ZP_03356696.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 101

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/88 (62%), Positives = 66/88 (75%)

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           VTG + GKGF+G +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  
Sbjct: 1   VTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNE 60

Query: 171 RVTVKNLEVVSVDDKRGLILVKGCVPGA 198
           RVTV++L+VV VD +R L+LVKG VPGA
Sbjct: 61  RVTVQSLDVVRVDAERNLLLVKGGVPGA 88


>gi|170064762|ref|XP_001867661.1| mitochondrial 39S ribosomal protein L3 [Culex quinquefasciatus]
 gi|167882034|gb|EDS45417.1| mitochondrial 39S ribosomal protein L3 [Culex quinquefasciatus]
          Length = 371

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 110/222 (49%), Gaps = 15/222 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH--------------RTLDKNGYM 47
           R+GV+A+K+G   ++  +G +I  T+L + +  VV +              +   KN Y 
Sbjct: 104 RTGVIAKKIGQYPLWRKDGTKIRTTLLQIIDNHVVKYIPPEEFEPPREPNQKRNWKNPYG 163

Query: 48  AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
            + VGA        +K   G F    V PK+ L  F +  +  +LP G+  + ++F VG 
Sbjct: 164 CLLVGAESRDPSIFTKEYCGLFKDSGVIPKQHLCRFIISPEARILP-GTPLNVTHFRVGD 222

Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
            VDV G T+  GF G +KRH+F G+ A+HGV+ +HR  G+ G      RV+   KM G M
Sbjct: 223 FVDVRGKTVDHGFQGVVKRHSFKGMPASHGVTKTHRRPGNIGAGGAKARVWPGTKMPGHM 282

Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           G     ++ L++  ++ K  ++ V+G       N  + + D+
Sbjct: 283 GNRWRNLRGLKIWRINTKYNVMWVQGSNIAGDTNGLVYIYDT 324


>gi|307194194|gb|EFN76611.1| 39S ribosomal protein L3, mitochondrial [Harpegnathos saltator]
          Length = 348

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 112/214 (52%), Gaps = 15/214 (7%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN----GYMAVQ------- 50
           R+G++A+K+G+  ++  +G ++  T+L + + +VV +   ++     G   +Q       
Sbjct: 81  RTGLIAKKIGVYPLWLKDGTKVYSTLLQVVDNEVVKYIPPEEFYPVIGKKPIQIKRRLGC 140

Query: 51  --VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQL 108
             VGAG    + V+K   G F    V PK  L  F +  +  L P   +F+ ++F  G++
Sbjct: 141 LVVGAGNINPQLVTKEYSGIFKDSGVMPKLVLRRFIISPEAALQPGTPLFA-THFKPGEV 199

Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
           VD+ G TI +GF G MKR  F G+ ATHGV+ +HR  G+ G      RV    KM G MG
Sbjct: 200 VDIRGKTIDRGFQGVMKRWGFKGMPATHGVTKTHRRPGNIGSGGQKARVMPGTKMPGHMG 259

Query: 169 GNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKN 201
                +K +E++ ++ K  ++ VKG  +PG   N
Sbjct: 260 NRWRILKGVEILRINTKYNVLWVKGHNIPGETNN 293


>gi|297286892|ref|XP_001115583.2| PREDICTED: 39S ribosomal protein L3, mitochondrial [Macaca mulatta]
          Length = 243

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 108/212 (50%), Gaps = 9/212 (4%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK--PMRGFF 69
           M  ++  +G +  VT+L + +C V+ + + + +      +  G   V    K  P+  F+
Sbjct: 1   MMPLWTKDGEKHVVTLLQVQDCHVLKYTSKENHNGKTAALSVGGKTVSRFRKATPVLEFY 60

Query: 70  SSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129
             + + PK+ +  F +  +  + P G+    ++F  GQ VDVT  TIGKGF G +KR  F
Sbjct: 61  RELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGKGFQGVVKRWGF 119

Query: 130 GGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRG 187
            G  ATHG + +HR  G  STG   D GRV+   KM G+MG    T   L+V  ++ K  
Sbjct: 120 KGQPATHGQTKTHRRPGALSTG---DIGRVWPGTKMPGKMGNIYRTAYGLKVWRINTKHN 176

Query: 188 LILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           +I V G VPG  KN  + VRDS   A    GK
Sbjct: 177 IIYVNGSVPG-HKNCLVKVRDSKLPAYKDLGK 207


>gi|116283537|gb|AAH16586.1| Mrpl3 protein [Mus musculus]
          Length = 243

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 111/213 (52%), Gaps = 13/213 (6%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRT-LDKNGYMAVQVGAGEAKVKNVSKPMR--GF 68
           M  ++  +G++  VT+L + +C V+ +    D NG +A     G+  V    KP     F
Sbjct: 1   MMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKIAALTVGGKT-VSRFYKPDSRLEF 59

Query: 69  FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
           +  + + PK+    F V  D+ ++  G+    ++F  GQ VDVT  TIGKGF G MKR  
Sbjct: 60  YRDLGLPPKQIHKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKGFQGVMKRWG 118

Query: 129 FGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKR 186
           F G  A+HG + +HR  G  STG   D  RV+   KM GRMG    TV  L+V  V+ K 
Sbjct: 119 FKGQPASHGQTKTHRRPGAISTG---DIARVWPGTKMPGRMGNQNRTVYGLKVWRVNTKH 175

Query: 187 GLILVKGCVPGAKKNSWILVRDSFKSAV--NCK 217
            +I V G VPG  KN  + ++DS   A   +CK
Sbjct: 176 NIIYVNGSVPG-HKNCLVKIKDSTLPAYKDSCK 207


>gi|125987858|sp|Q85FW3|RK3_CYAME RecName: Full=50S ribosomal protein L3, chloroplastic
          Length = 182

 Score =  103 bits (257), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/194 (36%), Positives = 103/194 (53%), Gaps = 28/194 (14%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++A K+GM+ +++ +G  +PVT +     +V+ HRT +K+GY A+ V             
Sbjct: 7   LLATKIGMSQLFDEKGNALPVTWVKSGVHEVIDHRTPEKHGYTALVV------------- 53

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSY-FTVGQLVDVTGMTIGKGFSGA 123
                       +  + EFRV K     P+G     S  F +GQ V V   TIGKGF+G 
Sbjct: 54  ----------RYQHWIREFRV-KHLSAYPIGRRLDLSTCFQIGQKVSVKAKTIGKGFAGY 102

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
            KRH+F     +HG S +HR  GS G    PGRVF   +MAGR+GGN  T+K LE++ + 
Sbjct: 103 QKRHHFARGPMSHG-SKNHRQPGSIGAGTFPGRVFPGTRMAGRLGGNFCTIKGLEILQIQ 161

Query: 184 DKRGLILVKGCVPG 197
           + +  + +KG VPG
Sbjct: 162 NDQ--MALKGAVPG 173


>gi|30468182|ref|NP_849069.1| ribosomal protein L3 [Cyanidioschyzon merolae strain 10D]
 gi|30409282|dbj|BAC76231.1| 50S ribosomal protein L3 [Cyanidioschyzon merolae strain 10D]
          Length = 203

 Score =  103 bits (257), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/194 (36%), Positives = 103/194 (53%), Gaps = 28/194 (14%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++A K+GM+ +++ +G  +PVT +     +V+ HRT +K+GY A+ V             
Sbjct: 28  LLATKIGMSQLFDEKGNALPVTWVKSGVHEVIDHRTPEKHGYTALVV------------- 74

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSY-FTVGQLVDVTGMTIGKGFSGA 123
                       +  + EFRV K     P+G     S  F +GQ V V   TIGKGF+G 
Sbjct: 75  ----------RYQHWIREFRV-KHLSAYPIGRRLDLSTCFQIGQKVSVKAKTIGKGFAGY 123

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
            KRH+F     +HG S +HR  GS G    PGRVF   +MAGR+GGN  T+K LE++ + 
Sbjct: 124 QKRHHFARGPMSHG-SKNHRQPGSIGAGTFPGRVFPGTRMAGRLGGNFCTIKGLEILQIQ 182

Query: 184 DKRGLILVKGCVPG 197
           + +  + +KG VPG
Sbjct: 183 NDQ--MALKGAVPG 194


>gi|195175673|ref|XP_002028553.1| GL21035 [Drosophila persimilis]
 gi|194104883|gb|EDW26926.1| GL21035 [Drosophila persimilis]
          Length = 368

 Score =  102 bits (254), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 106/211 (50%), Gaps = 15/211 (7%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVV-------------VHRTLDKNGYMA 48
           R GV+ARK+G   ++   G+++  T+L + +  V+             + R  + N Y  
Sbjct: 104 RCGVIARKIGQYPLWLKNGKKVRTTLLQIADNHVIKYMPHEECRPQKNLSRVHNSNQYGC 163

Query: 49  VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQL 108
           + VGA       ++K   G F    V PKK +  F V  D  L P G+  + S F VG+ 
Sbjct: 164 LLVGAESTNPSMLTKEYCGIFRDAGVVPKKNIMRFMVSPDGALAP-GTPLNISRFRVGEY 222

Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
           VDV G T+  GF G +KRH + G+ A+HGV+ +HR  G+ G   + GRV+   KM G MG
Sbjct: 223 VDVRGKTVDHGFQGVVKRHGYKGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKMPGHMG 282

Query: 169 GNRVTVKNLEVVSVDDKRGLILVKG-CVPGA 198
                +K L +   + K  ++ V+G  VPG 
Sbjct: 283 NRWRVLKGLRIWRTNAKYNVMWVQGSSVPGP 313


>gi|195478966|ref|XP_002100716.1| GE17217 [Drosophila yakuba]
 gi|194188240|gb|EDX01824.1| GE17217 [Drosophila yakuba]
          Length = 359

 Score =  102 bits (254), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 106/212 (50%), Gaps = 18/212 (8%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQV---------- 51
           R GV+ARK+G   ++   G RI  T+L + +  V+  + +    Y+  QV          
Sbjct: 96  RCGVIARKIGQYPLWLKNGERIRTTLLQIADNHVI--KYIPPEEYLPAQVPTVANLHKRG 153

Query: 52  ----GAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
               G+       ++K   G F +  V PKK L  F V  +  L P G+  S ++F +G 
Sbjct: 154 CILVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEAQLEP-GTPLSVNHFRIGD 212

Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
            VDV G T+  GF G +KRH F G+ A+HGV+ +HR  G+ G   + GRV+   KM G M
Sbjct: 213 FVDVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHM 272

Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKG-CVPGA 198
           G     +K L V  ++ K  ++ V+G  VPG 
Sbjct: 273 GNRWRKIKGLRVWRINSKYNVMWVQGSSVPGP 304


>gi|194376318|dbj|BAG62918.1| unnamed protein product [Homo sapiens]
          Length = 243

 Score =  102 bits (253), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 109/210 (51%), Gaps = 5/210 (2%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVKNVSKPMRGFF 69
           M  ++  +G++  VT+L + +C V+ + + +  NG MA + VG         +  +  F+
Sbjct: 1   MMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSRFRKATSILEFY 60

Query: 70  SSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129
             + + PK+ +  F +  +  + P G+    ++F  GQ VDVT  TIGKGF G MKR  F
Sbjct: 61  RELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGKGFQGVMKRWGF 119

Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLI 189
            G  ATHG + +HR  G+     D GRV+   KM G+MG    T   L+V  ++ K  +I
Sbjct: 120 KGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKMGNIYRTEYGLKVWRINTKHNII 178

Query: 190 LVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            V G VPG  KN  + V+DS   A    GK
Sbjct: 179 YVNGSVPG-HKNCLVKVKDSKLPAYKDLGK 207


>gi|331702080|ref|YP_004399039.1| 50S ribosomal protein L3 [Lactobacillus buchneri NRRL B-30929]
 gi|329129423|gb|AEB73976.1| 50S ribosomal protein L3 [Lactobacillus buchneri NRRL B-30929]
          Length = 211

 Score =  101 bits (251), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 114/210 (54%), Gaps = 9/210 (4%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ +K+GMT V+   G  +PVTV+ +    ++  +T++ +GY +VQ+G  + +    
Sbjct: 3   RKGILGKKVGMTQVFTENGELVPVTVVEVTPNVIMQIKTVENDGYDSVQLGYADKRTVLT 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP +G     N +PK+ + E    KD +L    V        F  G +VDVTG T G G
Sbjct: 63  NKPEQGHAKKANTTPKRFIKEI---KDVELGDYKVSDEVKADIFKPGDIVDVTGTTKGHG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           + G + +        THG S  HR  GS G   +  RV    K+ GRMG   VT++NLE+
Sbjct: 120 YQGNIHKDGQSRGPETHG-SRYHRRPGSLGVIIN--RVVPGMKLPGRMGNKTVTIQNLEI 176

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           V+ D    ++L+KG VPGA K S+I +R +
Sbjct: 177 VNADTDNNVLLIKGNVPGANK-SYITIRSA 205


>gi|323342789|ref|ZP_08083021.1| 50S ribosomal protein L3 [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463901|gb|EFY09095.1| 50S ribosomal protein L3 [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 230

 Score =  101 bits (251), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 113/209 (54%), Gaps = 4/209 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT V+  +G+ IPV+V+ +    V+  +T++ + Y AVQ+GA + K +  +K
Sbjct: 3   GLLGRKLGMTQVFTTDGKLIPVSVVEVLPNVVLQKKTMESDNYEAVQLGAFDVKEQRANK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
                 +  + +PKK + E    +  +   VG+      F+ G+ VDVTG + G GF G+
Sbjct: 63  SEIAHAAKASTAPKKFVREIAGSEMMN-FEVGAEIKADLFSEGEYVDVTGTSRGHGFQGS 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGC-RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           + R N       HG    HR  GS      +P  + K + + G+ GG   T + LEV+ V
Sbjct: 122 IVRANQKIGPKAHGSGF-HRGVGSLATGGLNPAVIKKGRILPGQHGGYTTTNQKLEVIKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D +   +L+KG +PG KK  +++V+ + K
Sbjct: 181 DTESNYLLIKGNIPGPKK-GFVIVKSTVK 208


>gi|21702611|gb|AAM76007.1|AF481103_17 ribosomal protein L3 [Candidatus Tremblaya princeps]
          Length = 205

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 99/194 (51%), Gaps = 13/194 (6%)

Query: 9   KLGMTCVYNIEGRRIPVTVLHLDNCQVVVH--RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
           K+GMT + +  G  +PVT+L +     + +  R+ D+   +   V +     K +S+P  
Sbjct: 10  KVGMTRISSASGGVVPVTILDVSGNTPLRNACRSSDERVVLYRSVHS-----KRLSRPQL 64

Query: 67  GFFSSVNVSPKKKLFEFRVQK---DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
                 N+ P      +  Q       +L  G   + +    GQLV +   ++GKGFSG 
Sbjct: 65  CACIGRNMEPAA-YSAWTAQHGMAQHGILACGRPHAKAILRAGQLVSIKARSVGKGFSGV 123

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F   RA+HG S +HR+ GSTG  QDPGRVF  K+M GRMG    T +NL V  V 
Sbjct: 124 MKRHGFSSGRASHGTSKAHRTLGSTGMSQDPGRVFPGKRMPGRMGCEHATARNLMVEHVA 183

Query: 184 DKRGLILVKGCVPG 197
                ++V+G +PG
Sbjct: 184 HD--FVMVRGGIPG 195


>gi|154305466|ref|XP_001553135.1| hypothetical protein BC1G_08502 [Botryotinia fuckeliana B05.10]
 gi|150853289|gb|EDN28481.1| hypothetical protein BC1G_08502 [Botryotinia fuckeliana B05.10]
          Length = 189

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/112 (45%), Positives = 68/112 (60%), Gaps = 1/112 (0%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +  K GMT +Y+ E G R P TV+ LD  QVV H+T +KNGY AVQVGAG     
Sbjct: 74  LRTGALGIKKGMTALYDPETGVRTPCTVVQLDRVQVVAHKTREKNGYYAVQVGAGWKHPS 133

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDV 111
           NV++P  G +    V+PK+ + EFRV+ +  LL VG      +F  GQ VD 
Sbjct: 134 NVTRPELGHYEKSQVAPKRYMAEFRVKNESGLLDVGRSIGAEWFIEGQFVDA 185


>gi|195566964|ref|XP_002107045.1| GD17236 [Drosophila simulans]
 gi|194204442|gb|EDX18018.1| GD17236 [Drosophila simulans]
          Length = 362

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 17/207 (8%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQV---------- 51
           R GV+ARK+G   ++   G RI  T+L + +  V+  + +    Y+  QV          
Sbjct: 99  RCGVIARKIGQYPLWLKNGERIRTTLLQIADNHVI--KYIPPEEYLPAQVPKVANLHKRG 156

Query: 52  ----GAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
               G+       ++K   G F +  V PKK L  F V  +  L P G+  + ++F +G 
Sbjct: 157 CILVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEAQLAP-GTPLTVNHFRIGD 215

Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
            VDV G T+  GF G +KRH F G+ A+HGV+ +HR  G+ G   + GRV+   KM G M
Sbjct: 216 FVDVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHM 275

Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGC 194
           G     +K L V  ++ K  ++ V+G 
Sbjct: 276 GNRWRIIKGLRVWRINTKYNVMWVQGS 302


>gi|194894275|ref|XP_001978039.1| GG17909 [Drosophila erecta]
 gi|190649688|gb|EDV46966.1| GG17909 [Drosophila erecta]
          Length = 362

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 105/212 (49%), Gaps = 18/212 (8%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQV---------- 51
           R GV+ARK+G   ++   G RI  T+L + +  V+  + +    Y+  QV          
Sbjct: 99  RCGVIARKIGQYPLWLKNGERIRTTLLQIADNHVI--KYIPPEEYLPAQVPKIANLHKRG 156

Query: 52  ----GAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
               G+       ++K   G F +  V PKK L  F V  +  L   G+  S ++F +G 
Sbjct: 157 CILVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEAQL-EAGTPLSVNHFRIGD 215

Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
            VDV G T+  GF G +KRH F G+ A+HGV+ +HR  G+ G   + GRV+   KM G M
Sbjct: 216 FVDVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHM 275

Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKG-CVPGA 198
           G     +K L V  ++ K  ++ V+G  VPG 
Sbjct: 276 GNRWRIIKGLRVWRINSKYNVMWVQGSSVPGP 307


>gi|195355411|ref|XP_002044185.1| GM22578 [Drosophila sechellia]
 gi|194129474|gb|EDW51517.1| GM22578 [Drosophila sechellia]
          Length = 362

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 17/207 (8%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQV---------- 51
           R GV+ARK+G   ++   G RI  T+L + +  V+  + +    Y+  QV          
Sbjct: 99  RCGVIARKIGQYPLWLKNGERIRTTLLQIADNHVI--KYIPPEEYLPAQVPKVANLHKRG 156

Query: 52  ----GAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
               G+       ++K   G F +  V PKK L  F V  +  L P G+  + ++F +G 
Sbjct: 157 CILVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEAQLAP-GTPLNVNHFRIGD 215

Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
            VDV G T+  GF G +KRH F G+ A+HGV+ +HR  G+ G   + GRV+   KM G M
Sbjct: 216 FVDVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHM 275

Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGC 194
           G     +K L V  ++ K  ++ V+G 
Sbjct: 276 GNRWRIIKGLRVWRINTKYNVMWVQGS 302


>gi|24642280|ref|NP_511166.2| mitochondrial ribosomal protein L3 [Drosophila melanogaster]
 gi|22832292|gb|AAF48508.2| mitochondrial ribosomal protein L3 [Drosophila melanogaster]
          Length = 362

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 17/207 (8%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQV---------- 51
           R GV+ARK+G   ++   G RI  T+L + +  V+  + +    Y+  QV          
Sbjct: 99  RCGVIARKIGQYPLWLKNGERIRTTLLQIVDNHVI--KYIPPEEYLPAQVPTVANLHKRG 156

Query: 52  ----GAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
               G+       ++K   G F +  V PKK L  F V  +  L P G+  + ++F VG 
Sbjct: 157 CILVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEAQLAP-GTPLNVNHFRVGD 215

Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
            VDV G T+  GF G +KRH F G+ A+HGV+ +HR  G+ G   + GRV+   KM G M
Sbjct: 216 FVDVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHM 275

Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGC 194
           G     +K L V  ++ K  ++ V+G 
Sbjct: 276 GNRWRIIKGLRVWRINTKYNVMWVQGS 302


>gi|241735550|ref|XP_002413953.1| 60S ribosomal protein L3, putative [Ixodes scapularis]
 gi|215507807|gb|EEC17261.1| 60S ribosomal protein L3, putative [Ixodes scapularis]
          Length = 390

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 110/222 (49%), Gaps = 19/222 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQ---------- 50
           +R+GV+ARK+G+  ++   G+RI  T+L + +  V+  R +    Y + +          
Sbjct: 107 VRTGVIARKIGIYPMWTTSGKRILTTLLQVLDNHVI--RYIPSEEYASSRFGFKAKGRGC 164

Query: 51  --VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQL 108
             VGAG A       P    F    V PK+KL  F +  D  + P G+  S  +F  G  
Sbjct: 165 LVVGAGSADPMLFKAPYLRLFQESGVMPKRKLTRFLITDDAAIQP-GTPLSAGHFRAGDY 223

Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
           V+V G T G GF G MKR    G   +HG + +HR  G+ G  +  G + K K+M G MG
Sbjct: 224 VNVYGKTRGHGFQGVMKRWKMKGGPKSHGTTKAHRRLGAIGGPR--GIILKGKRMPGHMG 281

Query: 169 GNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDS 209
             R  +  L++  ++ K  ++ V+G  VPGA   S++ + DS
Sbjct: 282 QERRLLVGLKIWRINTKLNVLFVQGPAVPGATL-SYVNIYDS 322


>gi|21430844|gb|AAM51100.1| SD19562p [Drosophila melanogaster]
          Length = 362

 Score = 99.0 bits (245), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 17/207 (8%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQV---------- 51
           R GV+ARK+G   ++   G RI  T+L + +  V+  + +    Y+  QV          
Sbjct: 99  RCGVIARKIGQYPLWLKNGERIRTTLLQIVDNHVI--KYIPPEEYLPAQVPTVANLHKRG 156

Query: 52  ----GAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
               G+       ++K   G F +  V PKK L  F V  +  L P G+  + ++F VG 
Sbjct: 157 CILVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEAQLAP-GTPLNVNHFRVGD 215

Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
            VDV G T+  GF G +KRH F G+ A+HGV+ +HR  G+ G   + GRV+   KM G M
Sbjct: 216 FVDVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHM 275

Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGC 194
           G     +K L V  ++ K  ++ V+G 
Sbjct: 276 GNRWRIIKGLRVWRINTKYNVMWVQGS 302


>gi|332028651|gb|EGI68685.1| 39S ribosomal protein L3, mitochondrial [Acromyrmex echinatior]
          Length = 271

 Score = 98.6 bits (244), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 119/224 (53%), Gaps = 17/224 (7%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-----NGYMAVQ------ 50
           R+G++A+K+G+  ++   G+++  T+L + + ++V +   +K     +   A+Q      
Sbjct: 3   RTGLIAKKIGVYPLWLKNGKKVNSTLLQVVDNEIVKYIPPEKFFPVKSKKPAIQIKNRRG 62

Query: 51  ---VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
              VGA     + ++K     F+   V+PK+ L  F V  +  L P   +F+ ++F  G+
Sbjct: 63  CLVVGAENIDPQLITKEYYNIFNDTGVTPKRVLRRFIVSPEAALQPGTPLFA-THFKPGE 121

Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
           +VD+ G TI +GF G MKR  F G+ A+HGV+ +HR  G+ G   +  RV    KM G M
Sbjct: 122 IVDIRGKTIDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKSRVMPGTKMPGHM 181

Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSF 210
           G     ++ + ++ ++ K  +I + G  +PG + N++  + D+ 
Sbjct: 182 GNRWRIIRGVRILRINTKYNVIWILGHNIPG-EINTYCYIYDTL 224


>gi|328781504|ref|XP_625054.3| PREDICTED: 39S ribosomal protein L3, mitochondrial [Apis mellifera]
          Length = 364

 Score = 97.8 bits (242), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 108/211 (51%), Gaps = 18/211 (8%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVV--------------HRTLDKNGYM 47
           R+G++ +K+G+  ++   GR++  T++ + + +VV               HR   KNG +
Sbjct: 101 RTGLIGKKIGVYPMWLKNGRKVLTTLIQIVDNEVVKYIPPEEYKPVKPIRHRIEVKNGCL 160

Query: 48  AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
            +  GA     + ++K   G F+   V+PKK L  F +  +  L P G+    ++F  G+
Sbjct: 161 VL--GAINVDPQLLTKEYYGIFNKAGVTPKKVLMRFTISPNAVLQP-GTPLYATHFKPGE 217

Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
            +D+ G TI +GF G MKR  F G+ A+HGV+ +HR  G+ G      RV    KM G M
Sbjct: 218 FIDIRGKTIDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGKLARVMPGTKMPGHM 277

Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKG-CVPG 197
           G     +K ++++ ++ K  +I V    VPG
Sbjct: 278 GNRWRILKGVKILRINTKYNVIWVLAQNVPG 308


>gi|125580740|gb|EAZ21671.1| hypothetical protein OsJ_05302 [Oryza sativa Japonica Group]
          Length = 116

 Score = 97.8 bits (242), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 49/99 (49%), Positives = 66/99 (66%), Gaps = 1/99 (1%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G LVD++G +IGKGF G +KRHNF     THG S SHR+ GS G    PGRV+K KK
Sbjct: 2   FKEGDLVDISGKSIGKGFQGGIKRHNFKRGLMTHG-SKSHRALGSIGAGTTPGRVYKGKK 60

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKN 201
           M GRMGG +  ++ L++V +D+   ++++KG VPG   N
Sbjct: 61  MPGRMGGTKTKIRKLKIVKIDNDLKVVMIKGAVPGKPGN 99


>gi|195133722|ref|XP_002011288.1| GI16081 [Drosophila mojavensis]
 gi|193907263|gb|EDW06130.1| GI16081 [Drosophila mojavensis]
          Length = 369

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 109/222 (49%), Gaps = 15/222 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
           R GV+ARK+G   ++   G RI  T+L + +  V+ +   ++            N Y  V
Sbjct: 105 RCGVIARKIGQYPLWLKNGERIRTTLLQVVDNHVIKYIPPEEYKPTQRPNVHNLNRYGCV 164

Query: 50  QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
            VGA       ++K   G F    V P K L  F V     L P G+  +  +F VG+ V
Sbjct: 165 LVGAESTNPAQLTKEYCGIFRDSGVMPTKNLARFIVSPQAALAP-GTPLNVGHFRVGEFV 223

Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
           DV G T+  GF G +KRH F G+ A+HGV+ +HR  G+ G   + GRV+   K+ G MG 
Sbjct: 224 DVRGKTVYHGFQGVVKRHGFKGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKLPGHMGN 283

Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSF 210
                K L +  ++ K  ++ V+G  VPG+  N  + + D+ 
Sbjct: 284 RWRISKGLRIWRINTKYNVMWVQGSAVPGS-TNGLVYIYDTI 324


>gi|289740087|gb|ADD18791.1| mitochondrial ribosomal protein L3 [Glossina morsitans morsitans]
          Length = 367

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 111/222 (50%), Gaps = 15/222 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVV----------VHRT--LDKNGYMAV 49
           R+GV+ARK+G   ++   G +I  T+L +     +           HR    + N Y  +
Sbjct: 102 RTGVIARKIGQYPLWLKNGEKIRTTLLQVVENHAIKYTPPEEYKPAHRPKVAELNKYGCL 161

Query: 50  QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
            VGA       ++K     F +  V+PK+ L  F +     + P G+  + ++F VG  V
Sbjct: 162 LVGAESCDPSILTKEYCNLFKNSGVTPKRHLVRFLISPSAAITP-GTPLNANHFRVGDYV 220

Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
           DV G T+  GF G +KRH F G+ A+HGV+ +HR  G+ G   + GRV+   K+ G MG 
Sbjct: 221 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKLPGHMGN 280

Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSF 210
                K L +  +++K  ++ V+G  +PG+  N  + + DS 
Sbjct: 281 RWRKAKGLRIWRINNKYNVLWVQGSAIPGS-TNGLVYIYDSI 321


>gi|308487608|ref|XP_003105999.1| hypothetical protein CRE_20298 [Caenorhabditis remanei]
 gi|308254573|gb|EFO98525.1| hypothetical protein CRE_20298 [Caenorhabditis remanei]
          Length = 403

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 101/213 (47%), Gaps = 21/213 (9%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVV---------------HRTLDKNGY 46
           R G+V RK+GM   +  +G RI  TVL +D   VV                 +  +++G 
Sbjct: 102 RVGLVVRKIGMLPQWTNDGNRILCTVLEVDENHVVSVTSPDSWYKASAVGKRKAFNRHGP 161

Query: 47  MA-VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP-VGSVFSPSYFT 104
           M  V VGAG       +   R  F+   V  K+KL  F V   +D LP  G      +F 
Sbjct: 162 MWRVTVGAGNDDPTKYTLAYRRQFARAGVPTKEKLGCFLVT--EDALPHAGQPLDARHFA 219

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
           VGQ V  TG TI  GF G M R    G + T   + SHR  GS G   D  R++  K+M 
Sbjct: 220 VGQHVTATGKTIDWGFQGGMHRWGMRG-QPTRRTTKSHRRIGSVGSVGD-ARIWPGKRMP 277

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197
           G MG    TV  LE+V +++ + +I VKG VPG
Sbjct: 278 GHMGYEWRTVSGLEIVRINNDKQVIYVKGSVPG 310


>gi|316967931|gb|EFV52284.1| electron transfer flavoprotein, alpha subunit [Trichinella
           spiralis]
          Length = 822

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 110/229 (48%), Gaps = 25/229 (10%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLH-----LDNCQVVVHRTLDKNGYMAVQVGAGE 55
           +R+G+V RK+G+   Y   G R+  T+L      LDN   V+  T  +  Y   ++G  E
Sbjct: 174 VRTGLVCRKIGVIPQYFKNGTRVLCTLLEAKEKVLDNH--VISYTDPEKWYKYSKIGKKE 231

Query: 56  A--------------KVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS 101
                            +  +   RG F    V PK+KL  F +  +  + P G+    +
Sbjct: 232 GLKMLGRLTVGVQSDDPQKFTAAYRGIFEKAGVLPKQKLAAFAITPNAQIQP-GTRLYAN 290

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
           +FTVGQ VDV G TI  GF G M R  F G+ ATHGV+ +HR  GS G       V   K
Sbjct: 291 HFTVGQYVDVWGHTIDYGFQGVMVRWGFKGMPATHGVTKTHRRPGSIGTAGQ-ACVKPGK 349

Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGC-VPGAKKNSWILVRDS 209
           KM G MG     ++ ++++ ++    ++ VKG  VPG    + I V+DS
Sbjct: 350 KMPGHMGSEWRALRGIQILRINTAEQVLYVKGPNVPGP-VGTLIYVKDS 397


>gi|290462065|gb|ADD24080.1| 39S ribosomal protein L3, mitochondrial [Lepeophtheirus salmonis]
          Length = 351

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 109/222 (49%), Gaps = 28/222 (12%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSG++A+K+G+  ++   G RI  T+L + +  VV  R +    Y +  VG      K 
Sbjct: 77  IRSGIIAQKIGLAPLWTKSGVRIMSTLLQVKDNHVV--RYIPAEEYASTHVGEKIKAPKG 134

Query: 61  VSKPMRGF-----------------------FSSVNVSPKKKLFEFRVQKDDDLLPVGSV 97
           ++   RG                        F+   VSPK+ L  F V  +  L P G+ 
Sbjct: 135 ITDTPRGLNPVLVVGADSRDPSTFTKGYCGLFNGSGVSPKRILSRFIVSPNAILKP-GTP 193

Query: 98  FSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATH-GVSISHRSHGSTGCRQDPGR 156
              S+F VG  VDV G  I +GF G MKR  F G+ + + G + +HR  GS G      R
Sbjct: 194 LYASHFQVGAYVDVRGTGIRRGFQGVMKRWGFHGMPSDNRGATKTHRRPGSIGSGCQKSR 253

Query: 157 VFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGC-VPG 197
           V+  +K+ G MGGN++ +  L+++ ++ K G++ V G  +PG
Sbjct: 254 VWPGQKLPGLMGGNKMIMPALQILRINHKEGVLYVTGQGIPG 295


>gi|195398797|ref|XP_002058007.1| GJ15729 [Drosophila virilis]
 gi|194150431|gb|EDW66115.1| GJ15729 [Drosophila virilis]
          Length = 372

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 111/223 (49%), Gaps = 19/223 (8%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH--------------RTLDKNGYM 47
           R G++ARK+G   ++   G R+  T+L + +  VV +              + LD+ G  
Sbjct: 109 RCGLIARKIGQYPLWLKNGERVRTTLLQVVDNHVVKYIPPGEYTPAQRPRVKHLDRYG-- 166

Query: 48  AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
            V VGA       ++K   G F    V P K L  F V     L P G+  +  +F VG+
Sbjct: 167 CVLVGAESTNPALLTKEYCGIFRDSGVMPTKNLARFIVSPQAALAP-GTPLNVGHFRVGE 225

Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
            VDV G T+  GF G +KRH F G+ A+HGV+ +HR  G+ G   + GRV+   KM G M
Sbjct: 226 FVDVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKMPGHM 285

Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDS 209
           G     +K L +  ++ K  ++ V+G  VPG+  N  + + D+
Sbjct: 286 GNRWRIIKGLRIWRINTKYNVMWVQGSAVPGS-TNGLVYIYDT 327


>gi|242019299|ref|XP_002430099.1| 50S ribosomal protein L3, putative [Pediculus humanus corporis]
 gi|212515180|gb|EEB17361.1| 50S ribosomal protein L3, putative [Pediculus humanus corporis]
          Length = 327

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 110/224 (49%), Gaps = 18/224 (8%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH--------------RTLDKNGYM 47
           RSG++  K+G+   ++  G+ +  T++ + +  V+ +              R   K G +
Sbjct: 51  RSGLIGIKIGVLPQWHTNGKPLLTTLIQIVDNHVISYIPPKDFIVNKKRLGRRFYKEGKL 110

Query: 48  A-VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVG 106
             + VG+     +  ++   G F+   V PKK L  F +     + P G+    ++F VG
Sbjct: 111 GCLVVGSVNCDPQMFTREYNGLFAKAGVMPKKLLTRFPIHPCAAIQP-GTPLYAAHFKVG 169

Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166
             VD+TG TI +GF G MKR  + G+ A+HGV+ +HR  G+ G   +  RVF   KM G 
Sbjct: 170 DYVDITGKTIYRGFQGVMKRWGYKGMPASHGVTKTHRRPGNIGSGGEKARVFPGTKMPGV 229

Query: 167 MGGNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDS 209
            G    T + L +  +D K  ++ V G  +PG   NS++ V D+
Sbjct: 230 QGNKMRTTRGLTIWKIDHKYNVLYVSGDNIPG-DVNSFVYVHDT 272


>gi|195425857|ref|XP_002061179.1| GK10341 [Drosophila willistoni]
 gi|194157264|gb|EDW72165.1| GK10341 [Drosophila willistoni]
          Length = 375

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 110/222 (49%), Gaps = 15/222 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
           R GV+ARK+G   ++   G R+  T+L + +  V+ +   ++            + Y  +
Sbjct: 111 RCGVIARKIGQYPLWLKNGERVRTTLLQIVDNHVIKYTPPEEYQPSHRPSVHNLHKYGCL 170

Query: 50  QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
            VGA       ++K   G F    V PKK +  F V     L P G+  +  +F VG+ V
Sbjct: 171 LVGAESTNPALLTKEYCGIFRDSGVMPKKNVARFIVSPQAALAP-GTPLNVGHFRVGEFV 229

Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
           DV G T+  GF G +KRH F G+ A+HGV+ +HR  G+ G   + GRV+   KM G MG 
Sbjct: 230 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 289

Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSF 210
                K L +  ++ K  ++ V+G  VPG+  N  I + D+ 
Sbjct: 290 RWRISKGLRIWRINTKYNVMWVQGSAVPGS-TNGLIYIYDTI 330


>gi|195059563|ref|XP_001995662.1| GH17642 [Drosophila grimshawi]
 gi|193896448|gb|EDV95314.1| GH17642 [Drosophila grimshawi]
          Length = 373

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 110/222 (49%), Gaps = 15/222 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
           R G++ARK+G   ++   G R+  T+L + +  V+ +   ++            N Y  V
Sbjct: 109 RCGLIARKIGQYPLWLKNGERVRTTLLQVVDNHVIKYIPPEEYRPTQRPNVHHLNKYGCV 168

Query: 50  QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
            VGA       ++K   G F    V PKK L  F V     L   G+  +  +F VG+ V
Sbjct: 169 LVGAECTNPALLTKEYCGLFRDSGVMPKKNLARFIVSPQAALA-AGTPLNVGHFRVGEFV 227

Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
           DV G T+  GF G +KRH F G+ A+HGV+ +HR  G+ G   + GRV+   KM G MG 
Sbjct: 228 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 287

Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSF 210
               +K L +  ++ K  ++ V+G  VPG+  N  + + D+ 
Sbjct: 288 RWRIIKGLRIWRINTKYNVMWVQGSAVPGS-TNGLVYIYDTI 328


>gi|294950331|ref|XP_002786576.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239900868|gb|EER18372.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 334

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 103/203 (50%), Gaps = 13/203 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+ A K+G   +++  G++  VTV  + N  V+  +T+ +NGY A+QVG G   +   
Sbjct: 77  RPGICAFKIGCMGLWDEWGQKHAVTVCKVHNSHVMRQKTIARNGYEALQVGTGWRTLGLH 136

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            +   G      V PK  + EFRV   D +LPVG  FS  +F  GQ V V+G + GKG+ 
Sbjct: 137 ERRRIGCCIRAGVEPKHHIEEFRVS-SDCMLPVGHEFSVRHFVPGQRVFVSGWSRGKGWQ 195

Query: 122 GAMKRHNFGG-----LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN-RVTVK 175
           G + R  F G       AT G+    R  GS        +V K KK  G MG + RVT  
Sbjct: 196 GVVTRWRFAGEGPIRCAATGGM----RMPGSISRGMSSSKVDKYKKQPGHMGPDPRVT-- 249

Query: 176 NLEVVSVDDKRGLILVKGCVPGA 198
           N  V  ++  R LI +KG VPG+
Sbjct: 250 NCTVFRIESTRNLIFLKGAVPGS 272


>gi|114589227|ref|XP_001147526.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
          Length = 315

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 104/219 (47%), Gaps = 34/219 (15%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
            R G++A KLGM  ++  +G++  VT+L                            K  +
Sbjct: 95  FRVGLIALKLGMMPLWTKDGQKHVVTLLQ---------------------------KATS 127

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + +    F+  + + PK+ +  F +  +  + P G+    ++F  GQ VDVT  TIGKGF
Sbjct: 128 ILE----FYRELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGKGF 182

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G MKR  F G  ATHG + +HR  G+     D GRV+   KM G+MG    T   L+V 
Sbjct: 183 QGVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKMGNIYRTEYGLKVW 241

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            ++ K  +I V G VPG  KN  + VRDS   A    GK
Sbjct: 242 RINTKHNIIYVNGSVPG-HKNCLVKVRDSKLPAYKDLGK 279


>gi|307189923|gb|EFN74159.1| 39S ribosomal protein L3, mitochondrial [Camponotus floridanus]
          Length = 370

 Score = 96.3 bits (238), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 115/226 (50%), Gaps = 21/226 (9%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQ----------- 50
           R+G++A+K+G+  ++  +G+++  T+L + + +VV +   +K  +  V+           
Sbjct: 102 RTGLIAKKIGVYPLWLKDGKKVSSTLLQIVDNEVVKYMPPEK--FHPVRSCKPPLQIKRR 159

Query: 51  -----VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105
                VGA     + V+K   G F    V PK+ L  F +  +  L P G+    ++F  
Sbjct: 160 LGCLVVGAENIDPQWVTKEYYGMFKDTGVIPKRVLRRFIISPEAALQP-GTPLIAAHFKP 218

Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
           G++VD+   TI +GF G MKR  F G+ A+HGV+ +HR  G+ G      RV    KM G
Sbjct: 219 GEIVDIRAKTIDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGRKARVMPGTKMPG 278

Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGC-VPGAKKNSWILVRDSF 210
            MG      +  +++ ++ K  +I +KG  +PG + NS+  + D+ 
Sbjct: 279 HMGNKWRVHRGQQILRINTKYNIIWIKGQNIPG-EINSYCHIYDTI 323


>gi|194767737|ref|XP_001965971.1| GF11271 [Drosophila ananassae]
 gi|190619814|gb|EDV35338.1| GF11271 [Drosophila ananassae]
          Length = 354

 Score = 95.5 bits (236), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 106/210 (50%), Gaps = 14/210 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
           R G +ARK+G   ++   G +I  T+L + +  ++ +   +K            N +  +
Sbjct: 91  RCGTIARKIGEYPLWLNNGEKIRTTLLQIIDNHIISYIPPEKYSPAHYPNVKNVNKFGCL 150

Query: 50  QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
            VGAG      ++K   G F    V PKK L  F V  +  L P G+  + +++ VG+ V
Sbjct: 151 LVGAGTINPTWLTKEYCGIFHESRVMPKKMLARFLVSPEAALHP-GTALNVAHYRVGEFV 209

Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
           DV G TI  GF G +KR  F G+ A+HGV+ +HR  G+ G   + GRV+   KM GRMG 
Sbjct: 210 DVRGKTIDYGFQGVVKRFGFKGMPASHGVTKTHRRVGNIGGGGEKGRVWPGTKMPGRMGS 269

Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGA 198
                K L+V+    K  ++ V+G  VPG 
Sbjct: 270 RWRINKGLQVLRTYLKYNVMWVQGSAVPGP 299


>gi|291230696|ref|XP_002735302.1| PREDICTED: mitochondrial ribosomal protein L3-like [Saccoglossus
           kowalevskii]
          Length = 349

 Score = 95.5 bits (236), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/212 (35%), Positives = 104/212 (49%), Gaps = 13/212 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH----RTLDKNGYMAVQVGAGEAK 57
           R GV+A KLGM  ++  +G R+  T+L L +C V+ +     T +K GY+   VGA  A 
Sbjct: 101 RCGVIAVKLGMMPLWTKQGERLQCTLLQLQDCCVIDYIPPEETQEKYGYLY--VGAKNAS 158

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
              V K     F                      L        ++F  G  VDVT  +IG
Sbjct: 159 PLYVGKAYADLFKXXXXXXXXXXXXXXXXXKRTPL------YAAHFRPGMYVDVTARSIG 212

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
            GF G MKR    G  A+HG + +HR  G+TG    PGRV   KKMAG+MG    T  NL
Sbjct: 213 HGFQGVMKRWGMKGQPASHGATKTHRKMGATGGGGKPGRVRLGKKMAGQMGNQLRTEVNL 272

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +VV V+ +  +I V G VPG    S+++V+D+
Sbjct: 273 QVVRVNTRYNIIYVSGTVPGF-HTSFVVVKDA 303


>gi|115534155|ref|NP_498045.2| hypothetical protein C26E6.6 [Caenorhabditis elegans]
 gi|94730420|sp|P49404|RM03_CAEEL RecName: Full=Putative 39S ribosomal protein L3, mitochondrial
 gi|83921825|gb|AAA21160.3| Hypothetical protein C26E6.6 [Caenorhabditis elegans]
          Length = 403

 Score = 95.1 bits (235), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/232 (34%), Positives = 106/232 (45%), Gaps = 20/232 (8%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVV---------------HRTLDKNGY 46
           R G+V RK+GM   +  EG RI  TVL +D   VV                 +  +++G 
Sbjct: 102 RVGLVVRKIGMLPQWTNEGNRILCTVLEVDENHVVSITSPEAWYKSSAVGKRKAFNRHGP 161

Query: 47  MA-VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105
           M  V VGAG       +   R  F    +  K+KL  F V  +D L   G      +F V
Sbjct: 162 MWRVTVGAGNDDPTKYTLGYRRQFVRAGIPVKEKLGCFLVT-EDALPSAGQPLDARHFGV 220

Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
           GQ V  TG TI  GF G M R    G + T   + SHR  GS G   D  R++  K+M G
Sbjct: 221 GQYVTATGKTIDWGFQGGMHRWGMRG-QPTRRTTKSHRRIGSVGSVGD-ARIWPGKRMPG 278

Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
            MG    TV  LE+V ++  + +I VKG VPG    + IL++D  +     K
Sbjct: 279 HMGYEWRTVSGLEIVRINVDKQVIYVKGSVPGDIGET-ILLKDCLQEEKRLK 329


>gi|260798664|ref|XP_002594320.1| hypothetical protein BRAFLDRAFT_201187 [Branchiostoma floridae]
 gi|229279553|gb|EEN50331.1| hypothetical protein BRAFLDRAFT_201187 [Branchiostoma floridae]
          Length = 242

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/141 (39%), Positives = 76/141 (53%), Gaps = 3/141 (2%)

Query: 69  FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
           F    + PK+K+ EF+V  D  + P G+    ++F  GQ VDV G TI KGF G MKRH 
Sbjct: 47  FEKAGIPPKRKIAEFKVSMDAAIKP-GTPLYAAHFRPGQYVDVYGKTIDKGFQGVMKRHG 105

Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188
           F G  A+HG + +HR  G+ G     GRV    K+ G MG      + L++  V+ K  +
Sbjct: 106 FKGQPASHGQTKTHRRPGAIGTAGH-GRVLPGTKLPGPMGNVVRYTRGLKIWRVNTKHNI 164

Query: 189 ILVKGCVPGAKKNSWILVRDS 209
           + V G VPG   + W+ V DS
Sbjct: 165 LYVNGQVPG-HNDGWVKVYDS 184


>gi|268574488|ref|XP_002642221.1| Hypothetical protein CBG18195 [Caenorhabditis briggsae]
 gi|187025223|emb|CAP35690.1| hypothetical protein CBG_18195 [Caenorhabditis briggsae AF16]
          Length = 402

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 100/213 (46%), Gaps = 21/213 (9%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVV---------------VHRTLDKNGY 46
           R G+V RK+GM   +  EG RI  T+L +D   VV                 +  +++G 
Sbjct: 102 RVGLVVRKIGMLPQWTKEGGRILCTILEVDENHVVGITSPDSWYKASAIGKRKAFNRHGP 161

Query: 47  MA-VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPV-GSVFSPSYFT 104
           M  V VGA      N +   R  F+   V  K+ L  F V   +D LP+ G      +F 
Sbjct: 162 MWRVTVGATNQDPTNYTSAYRKKFTRAGVPVKETLGCFLV--TEDALPLLGQPLDARHFE 219

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
           VGQ V  TG TI  GF G M R    G + T   + SHR  GS G   D  R++  K+M 
Sbjct: 220 VGQYVTATGKTIDWGFQGGMHRWGMRG-QPTRRTTKSHRRIGSVGSVGD-ARIWPGKRMP 277

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197
           G MG    TV  LE+V ++  + ++ VKG VPG
Sbjct: 278 GHMGYEWKTVSGLEIVRINIDKQVMYVKGSVPG 310


>gi|221125421|ref|XP_002162736.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 271

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 109/205 (53%), Gaps = 9/205 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTL----DKNGYMAVQVGAGEA 56
           +R G +  KLG++ ++   G    VT++ + +CQV+  +        +G   + +G  + 
Sbjct: 13  IRVGALGIKLGVSVLWTKNGFCHMVTLVQIKDCQVIDTQISCEDGGNDGITQMLLGCCDI 72

Query: 57  KVKNV-SKPMRG---FFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
              NV +K  R    ++   N+ PK+    F V K+  L P G+  +  +F  GQ V V 
Sbjct: 73  TDDNVLAKLPRDHVLWYDQRNLFPKQYWTGFPVTKNALLFP-GTKITSLHFQPGQHVVVQ 131

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++I KGF G M+R    G   +HG +++HR  G TG  QDPGR+F  K MAG +G +  
Sbjct: 132 GISIDKGFQGVMRRWGMKGQPQSHGQTLTHRKMGGTGGGQDPGRIFPGKHMAGHVGRDYA 191

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPG 197
           TV  L ++ ++ K  ++ ++G +PG
Sbjct: 192 TVGPLRILRINTKFNVLYIRGGIPG 216


>gi|323304802|gb|EGA58561.1| Mrpl9p [Saccharomyces cerevisiae FostersB]
          Length = 119

 Score = 92.8 bits (229), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 47/94 (50%), Positives = 64/94 (68%), Gaps = 1/94 (1%)

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR+ F GLRA+HG SI HR  GS G  QDPGRV   +KM G MG   VT++N++V+ VD
Sbjct: 1   MKRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVLKVD 60

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           D+  +I VKG V G  KNS++ ++D+ K  ++ K
Sbjct: 61  DENNVIWVKGSVAGP-KNSFVKIQDAIKKNLSIK 93


>gi|324516671|gb|ADY46600.1| 39S ribosomal protein L3 [Ascaris suum]
          Length = 401

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 108/232 (46%), Gaps = 20/232 (8%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVV--------------HRTLDKNGY 46
           R G++ARKLGM   +   G R+  T+L   +NC V                 +     G 
Sbjct: 96  RVGLLARKLGMLPQWLNNGTRVLCTMLEFPENCVVSAIDPETWYRKSIVGKKKAFGIQGP 155

Query: 47  MA-VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105
           M  V VGA  A     +   R  F    +  K+ L  F V +D  + P G+     +F+V
Sbjct: 156 MWKVTVGAVNADPSKFTHVYRDIFMRQGLPVKQHLGSFVVTEDAVVAP-GTPLHVCHFSV 214

Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
           GQ + VTG TI  GF G M R    G+ A    + SHR  GS G   D  RV+  K+M G
Sbjct: 215 GQYIAVTGRTIDWGFQGGMHRWGMKGMPANR-TTKSHRRIGSIGSTGD-ARVWPGKRMPG 272

Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
            MG   VT   LEV+ ++  + ++ +KGCVPG +    +LV+D  + +   K
Sbjct: 273 HMGYEWVTTSGLEVLRINPGKQVMYIKGCVPG-EVGEILLVKDCLQPSKRVK 323


>gi|406362|gb|AAD12434.1| unknown [Mycoplasma genitalium]
          Length = 154

 Score = 91.7 bits (226), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 84/156 (53%), Gaps = 7/156 (4%)

Query: 23  IPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFE 82
           +P+T+++ +  QV   +T+ K+ Y A  +       K ++KP +GFFS + + P K L E
Sbjct: 2   LPITIVYCEANQVAGIKTIAKDNYNATLLSFQTVDEKQLNKPKQGFFSKLKLEPHKYLRE 61

Query: 83  FRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSIS 141
            R  +  +L   G   +P   F +G+ VDVT +T G+GF+GA+KR NF      HG    
Sbjct: 62  IRKMQGFEL---GKKITPQELFKIGEYVDVTSLTKGRGFTGAIKRWNFKIGPLGHGAGYP 118

Query: 142 HRSHGSTGCRQ---DPGRVFKNKKMAGRMGGNRVTV 174
           HR  GS    +      RVFK KKM+G  G  +VT+
Sbjct: 119 HRFQGSVQAGRGGSSAQRVFKGKKMSGHYGHEQVTI 154


>gi|322799942|gb|EFZ21068.1| hypothetical protein SINV_02593 [Solenopsis invicta]
          Length = 366

 Score = 91.7 bits (226), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 114/234 (48%), Gaps = 19/234 (8%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQ----------- 50
           R+G++A+K+G+  ++   G+++  T+L + + +VV +   +K  Y  V+           
Sbjct: 99  RTGLIAKKIGVYPLWLKNGKKVTSTLLQIVDNEVVKYIPPEK--YNPVKSKRPPIQVKKR 156

Query: 51  -----VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105
                VGA     + ++K     F+   V PK+ L  F +  +  L P   +F+ ++F  
Sbjct: 157 RGCLVVGAENINPQLITKEYYSIFNDTGVMPKRVLRRFVISPEAALQPGTPLFA-THFKP 215

Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
           G++VD+ G T+ +GF G MKR  F G  A+HG + +HR  G+ G      RV    KM G
Sbjct: 216 GEVVDIRGKTVDRGFQGVMKRWGFHGQPASHGQTKTHRRPGNIGSGGTKARVMPGTKMPG 275

Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            MG     ++ + ++ ++ K  +I V G     + N+++ + D+       K K
Sbjct: 276 HMGNRWRILRGVRILRINTKYNVIWVLGHNLPGETNNYVYMYDTLLPLRQFKTK 329


>gi|256087284|ref|XP_002579802.1| 50S ribosomal protein L3 [Schistosoma mansoni]
 gi|238665289|emb|CAZ36041.1| 50S ribosomal protein L3, putative [Schistosoma mansoni]
          Length = 394

 Score = 90.9 bits (224), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 30/235 (12%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQ---------- 50
           R G++A KLG+  ++   G+++  T+  + DN  +      + + Y+++           
Sbjct: 96  RCGLIAIKLGVYPLWTKTGKKMDCTIFQIPDNHAIRYTPPSEIDKYISLLHPRHYWLNNK 155

Query: 51  ---------------VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG 95
                          VGA  A     +    G F    + PK+K+  F V  D  L P G
Sbjct: 156 RPPSWITQKRWGIQLVGAFSADPIEFTSEWCGLFKEAGIPPKRKISRFLVSPDAALKP-G 214

Query: 96  SVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
           +  S ++F VG  +D+T  TI +GF G ++R    G  A HG +  HR  GS   R  P 
Sbjct: 215 TPLSVNHFRVGDYLDITARTINRGFEGVIERWGMKGGPAAHGSTKFHRRMGSAAGRGGP- 273

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
            + + K+MAG MG    +++ + +V ++ K GLI V G  PG   +S+ L+ DS+
Sbjct: 274 -IVRGKRMAGVMGNRFRSLRGVMIVRINPKLGLIYVPGTTPGP-VHSYCLLNDSW 326


>gi|169603664|ref|XP_001795253.1| hypothetical protein SNOG_04840 [Phaeosphaeria nodorum SN15]
 gi|160706431|gb|EAT87231.2| hypothetical protein SNOG_04840 [Phaeosphaeria nodorum SN15]
          Length = 190

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 63/92 (68%), Gaps = 1/92 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G++A K GMT +Y+   G+R   TVL LD   VV H+T +KNGY AVQ+GAG+ + +
Sbjct: 80  LRTGLLALKRGMTAIYDPTTGKRAACTVLQLDRNVVVAHKTREKNGYWAVQIGAGQKEAR 139

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL 91
           NV+KPM G F+    +PK+ + EF+V+  + L
Sbjct: 140 NVTKPMLGHFAKAETAPKRWVVEFKVKGQEGL 171


>gi|323337449|gb|EGA78698.1| Mrpl9p [Saccharomyces cerevisiae Vin13]
          Length = 119

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/87 (51%), Positives = 60/87 (68%), Gaps = 1/87 (1%)

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR+ F GLRA+HG SI HR  GS G  QDPGRV   +KM G MG   VT++N++V+ VD
Sbjct: 1   MKRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVLKVD 60

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSF 210
           D+  +I VKG V G  KNS++ ++D+ 
Sbjct: 61  DENNVIWVKGSVAGP-KNSFVKIQDAI 86


>gi|146332291|gb|ABQ22651.1| mitochondrial 39S ribosomal protein L3-like protein [Callithrix
           jacchus]
          Length = 173

 Score = 89.0 bits (219), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/129 (44%), Positives = 73/129 (56%), Gaps = 7/129 (5%)

Query: 83  FRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISH 142
           FR+  +  L P G+    ++F  GQ VDVT  TIGKGF G MKR  F G  ATHG + +H
Sbjct: 4   FRITDNAALKP-GTPLYAAHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTH 62

Query: 143 RSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKK 200
           R  G  STG   D  RV+   K+ G+MG    TV  L+V  ++ K  +I V G VPG  K
Sbjct: 63  RRPGAISTG---DVARVWPGTKLPGQMGNIDRTVHGLKVWRINTKHNIIYVNGSVPG-HK 118

Query: 201 NSWILVRDS 209
           N  + VRDS
Sbjct: 119 NCLVKVRDS 127


>gi|157165062|ref|YP_001467720.1| 50S ribosomal protein L3 [Campylobacter concisus 13826]
 gi|157101500|gb|ABV23519.1| ribosomal protein L3 [Campylobacter concisus 13826]
          Length = 192

 Score = 88.2 bits (217), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 102/193 (52%), Gaps = 17/193 (8%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+    I  +  PVT+L L   +V     +D+N    V     +A  K ++   
Sbjct: 4   IVEKIGMS--RTIATKSTPVTLLKLVEAKVC---EIDENKRAIVAYAHTKANNKAIAGQQ 58

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV-FSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + +  +   +   K     V   +    VG++ F+P      +++ V+  + G+G+ G +
Sbjct: 59  KKYNLTAEFN---KFATLEVANSE----VGNLDFTP--LNEAKILKVSFNSKGRGYQGVV 109

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH FGG   +HG S  HR HGS G  + PGRV    KMAG MG  +VTVKN E++S D 
Sbjct: 110 KRHGFGGGPKSHG-SRFHRRHGSIGNCEWPGRVQPGMKMAGHMGNEKVTVKN-ELISFDA 167

Query: 185 KRGLILVKGCVPG 197
           + G+++VKGCVPG
Sbjct: 168 QNGIVVVKGCVPG 180


>gi|222823103|ref|YP_002574676.1| 50S ribosomal protein L3 [Campylobacter lari RM2100]
 gi|222538324|gb|ACM63425.1| 50S ribosomal protein L3 [Campylobacter lari RM2100]
          Length = 191

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 100/196 (51%), Gaps = 24/196 (12%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDN---CQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           +  K+GM+    I    IPVT+L L     C+V       +NG   V    G+A  K ++
Sbjct: 4   IVEKIGMS--RTISTPSIPVTLLKLVQTKVCEV-------ENGKALVAYVKGKANNKCIA 54

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
              + +  S   +    L     +  D DL P+             ++ V+  + G+G+S
Sbjct: 55  GQQKKYNLSAEYNRFASLEVANTEAGDIDLNPLKEA---------SILKVSFNSKGRGYS 105

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRH F G  A+HG S  HR HGS G R+ PGRV    KMAG  G  +VTVKN EVVS
Sbjct: 106 GVVKRHGFAGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGHYGNVKVTVKN-EVVS 163

Query: 182 VDDKRGLILVKGCVPG 197
            D++ G+++VKG VPG
Sbjct: 164 FDEENGILVVKGAVPG 179


>gi|154175439|ref|YP_001409153.1| 50S ribosomal protein L3 [Campylobacter curvus 525.92]
 gi|153793233|gb|EAT99616.2| ribosomal protein L3 [Campylobacter curvus 525.92]
          Length = 192

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 102/193 (52%), Gaps = 17/193 (8%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+    I  +  PVT+L L   +V     +D+N    V     +A  K ++   
Sbjct: 4   IVEKIGMS--RTISTQSTPVTLLKLVEAKVC---EIDENKRAIVAYAHTKANNKTIAGQQ 58

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV-FSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + +  +   +   K     V   +    VG++ F+P   +  +++ V+  + G+G+ G +
Sbjct: 59  KKYNLTAEFN---KFATLEVANSE----VGNLDFTP--LSEAKILKVSFNSKGRGYQGVV 109

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH F G   +HG S  HR HGS G  + PGRV    KMAG MG  +VTVKN E+VS D 
Sbjct: 110 KRHGFSGGPKSHG-SRFHRRHGSIGNCEWPGRVQPGMKMAGHMGNEKVTVKN-ELVSFDA 167

Query: 185 KRGLILVKGCVPG 197
           + G+++VKGCVPG
Sbjct: 168 ENGIVVVKGCVPG 180


>gi|57238730|ref|YP_179845.1| 50S ribosomal protein L3 [Campylobacter jejuni RM1221]
 gi|121613090|ref|YP_001001351.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|148926798|ref|ZP_01810477.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|153952159|ref|YP_001398986.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. doylei
           269.97]
 gi|157415929|ref|YP_001483185.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 81116]
 gi|167006240|ref|ZP_02271998.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|205355721|ref|ZP_03222491.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|283956163|ref|ZP_06373648.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 1336]
 gi|305432598|ref|ZP_07401759.1| 50S ribosomal protein L3 [Campylobacter coli JV20]
 gi|315125092|ref|YP_004067096.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|57167534|gb|AAW36313.1| ribosomal protein L3 [Campylobacter jejuni RM1221]
 gi|121504221|gb|EAQ71912.2| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 81-176]
 gi|145844523|gb|EDK21630.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|152939605|gb|ABS44346.1| ribosomal protein L3 [Campylobacter jejuni subsp. doylei 269.97]
 gi|157386893|gb|ABV53208.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 81116]
 gi|205346498|gb|EDZ33131.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|283792317|gb|EFC31101.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 1336]
 gi|304444309|gb|EFM36961.1| 50S ribosomal protein L3 [Campylobacter coli JV20]
 gi|307748567|gb|ADN91837.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni M1]
 gi|315018814|gb|ADT66907.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315059153|gb|ADT73482.1| LSU ribosomal protein L3p [Campylobacter jejuni subsp. jejuni S3]
 gi|315931325|gb|EFV10294.1| ribosomal protein L3 family protein [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 191

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 2/91 (2%)

Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166
           +++ V+  T G+G+SG MKRHNF G  A+HG S  HR HGS G R+ PGRV    KMAG 
Sbjct: 91  KILKVSFNTKGRGYSGVMKRHNFAGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGH 149

Query: 167 MGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197
            G  +VTVKN EVVS D +  +++VKG VPG
Sbjct: 150 YGNTKVTVKN-EVVSYDAENKILVVKGAVPG 179


>gi|296005215|ref|XP_002808939.1| organelle ribosomal protein L3 precursor, putative [Plasmodium
           falciparum 3D7]
 gi|225631825|emb|CAX64220.1| organelle ribosomal protein L3 precursor, putative [Plasmodium
           falciparum 3D7]
          Length = 317

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 7/211 (3%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           +  RK+ M  +++ +G  IP T++ +     V++R LD  G + +  G    + + + KP
Sbjct: 97  IRGRKIEMKSIFSPQGDLIPATLIEI--MPNVIYRFLD-FGKVGIAYGKPLDESRWILKP 153

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
             G  + V  + K           + +L  G +   SY    + V+V G++ GKGF G +
Sbjct: 154 EIGQIAKVGCNLKNTCSLTLTPPQNFVL--GQIIDVSYLYNYKYVNVRGLSKGKGFCGVI 211

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR  F     +HG S  HR  GS G     GRV K KKM G+ G    T+ NL+++ ++ 
Sbjct: 212 KRWGFKRGPMSHGSS-HHRKPGSIGASTHIGRVLKGKKMPGKHGNKYRTMINLKLLGLNL 270

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           +R  ILV GC+PG  +NS++ V  +  + VN
Sbjct: 271 ERNEILVSGCIPG-NRNSYVTVTATRDNKVN 300


>gi|82753677|ref|XP_727774.1| ribosomal protein L3 [Plasmodium yoelii yoelii str. 17XNL]
 gi|23483784|gb|EAA19339.1| ribosomal protein L3, putative [Plasmodium yoelii yoelii]
          Length = 315

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 110/214 (51%), Gaps = 7/214 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R  +  +K+ M  +++  G+ IP T++ +     +++R LD  G + +  G    + + +
Sbjct: 92  RIQIRGKKIEMRSIFSPNGKLIPATLIKI--MPNIIYRFLDF-GKVGIAYGKPLNESRWI 148

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP  G  S +N S  K      +    + + +G +   SY    + V+V G++ GKGFS
Sbjct: 149 LKPEIGQISKIN-SNLKNTCSLTLTPPQNFV-LGQIIDVSYLYNYKYVNVRGLSKGKGFS 206

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F     THG S  HR  GS G     GRV K KKM G+ G    T+ NL+++ 
Sbjct: 207 GVIKRWGFHRGPMTHG-SGHHRKPGSIGASTHIGRVLKGKKMPGKDGNKYRTMINLKLLG 265

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           ++ +R  ILV GC+PG  +NS + V  +  + +N
Sbjct: 266 LNLERNEILVSGCIPG-NRNSDVTVTATRDNKIN 298


>gi|218563293|ref|YP_002345073.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|42559704|sp|Q9PLX1|RL3_CAMJE RecName: Full=50S ribosomal protein L3
 gi|112361000|emb|CAL35801.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|284926898|gb|ADC29250.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315926634|gb|EFV06014.1| ribosomal protein L3 family protein [Campylobacter jejuni subsp.
           jejuni DFVF1099]
 gi|315930642|gb|EFV09664.1| ribosomal protein L3 family protein [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 191

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/91 (52%), Positives = 62/91 (68%), Gaps = 2/91 (2%)

Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166
           +++ V+  T G+G+SG MKRHNF G  A+HG S  HR HGS G R+ PGRV    KMAG 
Sbjct: 91  KILKVSFNTKGRGYSGVMKRHNFAGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGH 149

Query: 167 MGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197
            G  +VT+KN EVVS D +  +++VKG VPG
Sbjct: 150 YGNTKVTIKN-EVVSYDAENKILVVKGAVPG 179


>gi|283953682|ref|ZP_06371213.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 414]
 gi|283794723|gb|EFC33461.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 414]
          Length = 191

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 2/91 (2%)

Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166
           +++ V+  T G+G+SG MKRHNF G  A+HG S  HR HGS G R+ PGRV    KMAG 
Sbjct: 91  KILKVSFNTKGRGYSGVMKRHNFSGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGH 149

Query: 167 MGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197
            G  +VTVKN EVVS D +  +++VKG VPG
Sbjct: 150 YGNTKVTVKN-EVVSYDAENKILVVKGAVPG 179


>gi|156097364|ref|XP_001614715.1| 50S ribosomal protein L3 [Plasmodium vivax SaI-1]
 gi|148803589|gb|EDL44988.1| 50S ribosomal protein L3, putative [Plasmodium vivax]
          Length = 316

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 109/214 (50%), Gaps = 7/214 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R  +  +K+ M  +++  G+ IP T++ +     V++R LD  G + +  G    + + +
Sbjct: 93  RIQIRGKKIEMRSIFSPNGKLIPATLIEI--MPNVIYRFLD-FGKVGIAYGKPLEESRWI 149

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP  G  + V  + K           + +L  G +   SY    + V+V G++ GKGF 
Sbjct: 150 LKPEIGQIAKVGCNYKNTCSLTLTPPQNFVL--GQIIDVSYLYNYKYVNVRGLSKGKGFC 207

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F     THG S  HR  GS G     GRV K KKM G+ G    T+ NL+++ 
Sbjct: 208 GVIKRWGFRRGPMTHGSS-HHRKPGSIGASTHIGRVLKGKKMPGKHGNKYNTMINLKLLG 266

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           ++ +R  ILV GC+PG  +NS++ V  + ++ V+
Sbjct: 267 LNLERNEILVSGCIPG-NRNSYVTVTATRENRVD 299


>gi|70943067|ref|XP_741624.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56520122|emb|CAH76721.1| large ribosomal subunit protein L3, prokaryotic (50S)-like,
           putative [Plasmodium chabaudi chabaudi]
          Length = 223

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 109/211 (51%), Gaps = 7/211 (3%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           +  +K+ M  +++  G+ IP T++ +     +++R LD  G + +  G    + + + KP
Sbjct: 3   IRGKKIEMRSIFSPNGKLIPATLIKI--MPNIIYRFLDF-GKVGIAYGKPLNESRWILKP 59

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
             G  S +N S  K      +    + + +G +   SY    + V+V G++ GKGFSG +
Sbjct: 60  EIGQISKIN-SNLKNTCSLTLTPPQNFV-LGQIIDVSYLYNYKYVNVRGLSKGKGFSGVI 117

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR  F     THG S  HR  GS G     GRV K KKM G+ G    T+ NL+++ ++ 
Sbjct: 118 KRWGFRRGPMTHG-SGHHRKPGSIGASTHIGRVLKGKKMPGKDGNKFRTMINLKLLGLNL 176

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           +R  ILV GC+PG  +NS + V  +  + +N
Sbjct: 177 ERNEILVSGCIPG-NRNSDVTVTATRDNKIN 206


>gi|328478154|gb|EGF48001.1| 50S ribosomal protein L3 [Lactobacillus rhamnosus MTCC 5462]
          Length = 159

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/163 (36%), Positives = 89/163 (54%), Gaps = 5/163 (3%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +G G+ +    +KP  G     + +PK+ + E R     D   VGS      F  G +VD
Sbjct: 1   MGYGDMREVLTNKPSVGHAKKADTTPKRFVREIRDVALSDY-EVGSEVKADEFAAGDIVD 59

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           VTG + G G+ G +K+         HG S  HR  GS G   +  +VFK KK+ GRMG +
Sbjct: 60  VTGTSKGHGYQGNIKKDGQSRGPMAHG-SRYHRRPGSLGAIIN--KVFKGKKLPGRMGNH 116

Query: 171 RVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             T++NL+VV+ D +  ++L+KG VPGA K S++ +R + K+A
Sbjct: 117 TRTMQNLQVVAADTEHNVLLIKGNVPGANK-SFVTIRSAVKAA 158


>gi|223038516|ref|ZP_03608810.1| 50S ribosomal protein L3 [Campylobacter rectus RM3267]
 gi|222880373|gb|EEF15460.1| 50S ribosomal protein L3 [Campylobacter rectus RM3267]
          Length = 192

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 102/200 (51%), Gaps = 31/200 (15%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+   N     IPVT+L + N +V     + + G   V    G+AK K +    
Sbjct: 4   IVEKIGMSRTVN--NPSIPVTLLKVVNAKVC---EVSECGSAIVAYAKGKAKNKAIEGQQ 58

Query: 66  RGF--------FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
           + +        F+++ V+ K+         D D  P+ S          +++ V+  + G
Sbjct: 59  KKYSLTAEFNKFATLQVANKE-------AGDLDFSPLSSA---------KILKVSFSSKG 102

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KG+ G +KRH FGG   +HG S  H+ HGS G R+ PGRV    KMAG  G  +VTVKN 
Sbjct: 103 KGYQGVVKRHGFGGGPKSHG-SRFHKRHGSIGNREWPGRVQPGMKMAGHTGNEKVTVKN- 160

Query: 178 EVVSVDDKRGLILVKGCVPG 197
           E+VS D + G++++KG V G
Sbjct: 161 EIVSFDAENGILVLKGSVAG 180


>gi|68073103|ref|XP_678466.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56498943|emb|CAH95840.1| large ribosomal subunit protein L3, prokaryotic (50S)-like,
           putative [Plasmodium berghei]
          Length = 221

 Score = 86.3 bits (212), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 102/198 (51%), Gaps = 6/198 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R  +  +K+ M  +++  G+ IP T++ +     +++R LD  G + +  G    + + +
Sbjct: 29  RIQIRGKKIEMRSIFSPNGKLIPATLIKI--MPNIIYRFLDF-GKVGIAYGKPLNESRWI 85

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP  G  S +N S  K      +    + + +G +   SY    + V+V G++ GKGFS
Sbjct: 86  LKPEIGQISKIN-SNFKNTCSLTLTPPQNFV-LGQIIDVSYLYNYKYVNVRGLSKGKGFS 143

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F     THG S  HR  GS G     GRV K KKM G+ G    T+ NL+++ 
Sbjct: 144 GVIKRWGFHRGPMTHG-SGHHRKPGSIGASTHVGRVLKGKKMPGKDGNKFRTMINLKLLG 202

Query: 182 VDDKRGLILVKGCVPGAK 199
           ++ +R  ILV GC+PG +
Sbjct: 203 LNLERNEILVSGCIPGNR 220


>gi|260891594|ref|ZP_05902857.1| hypothetical protein GCWU000323_02809 [Leptotrichia hofstadii
           F0254]
 gi|260858702|gb|EEX73202.1| ribosomal protein L3 [Leptotrichia hofstadii F0254]
          Length = 90

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/89 (52%), Positives = 61/89 (68%), Gaps = 2/89 (2%)

Query: 124 MKRHNFGGLRATHGVSISHRSHGS-TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           MKRHNFGG RA+HGVS +HR  GS  G       V K KKMAGR+G  +VTV+NL+V+  
Sbjct: 1   MKRHNFGGNRASHGVSRNHRLGGSNAGGAASNSNVPKGKKMAGRLGAEKVTVQNLQVIKY 60

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D +  L+LVKG VPG  KN +++++ S K
Sbjct: 61  DVENSLLLVKGAVPGP-KNGYLVIKKSVK 88


>gi|227871802|ref|ZP_03990206.1| possible ribosomal protein L3 [Oribacterium sinus F0268]
 gi|227842365|gb|EEJ52591.1| possible ribosomal protein L3 [Oribacterium sinus F0268]
          Length = 128

 Score = 85.5 bits (210), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 72/131 (54%), Gaps = 3/131 (2%)

Query: 82  EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSIS 141
           EFR +  ++   V        F  G  VDV+  + GKGF+ A+K++       THG S  
Sbjct: 1   EFRFENAEEY-KVKDEIKADIFAEGDKVDVSATSKGKGFASAIKKYGQHRGPMTHG-SKF 58

Query: 142 HRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKN 201
           HR  GS G    P RV   K M   MG  +VT +NL VV VD ++GLILVKG VPG KK 
Sbjct: 59  HRHQGSNGTSATPSRVLPGKGMPSHMGAVKVTTQNLTVVKVDAEQGLILVKGAVPGPKK- 117

Query: 202 SWILVRDSFKS 212
           + + ++++ KS
Sbjct: 118 ALVTIKEAVKS 128


>gi|325116477|emb|CBZ52031.1| putative 50S ribosomal protein L3 [Neospora caninum Liverpool]
          Length = 447

 Score = 85.5 bits (210), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 96/204 (47%), Gaps = 28/204 (13%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ARK+ MT  ++ +G+  PVT+L +    +V      + G   V   A + +   V +P
Sbjct: 199 LLARKIDMTACFSPDGQAEPVTLLQVIPATIV---QFLEYGKAVVSYDAPKRRRLFVKRP 255

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT-----------G 113
           + G    V  +     FE             +V  P+ F +GQ++DV+            
Sbjct: 256 VLGKLQRVGAT----GFETATL---------TVRPPNEFVLGQVLDVSSLMGAKHVHVRA 302

Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
           +   KGF G + RH F     THG S  HR  GS G   DPGRV    +MAGR      T
Sbjct: 303 LKKAKGFQGIVSRHGFHRGPMTHG-STHHRGPGSVGAGTDPGRVLPGTRMAGRDKAKYAT 361

Query: 174 VKNLEVVSVDDKRGLILVKGCVPG 197
           V+NL V+  + K+ L++V+G VPG
Sbjct: 362 VRNLRVLGFNPKQNLLIVRGSVPG 385


>gi|221054630|ref|XP_002258454.1| large ribosomal subunit protein l3, prokaryotic (50s)-like
           [Plasmodium knowlesi strain H]
 gi|193808523|emb|CAQ39226.1| large ribosomal subunit protein l3, prokaryotic (50s)-like,
           putative [Plasmodium knowlesi strain H]
          Length = 315

 Score = 85.1 bits (209), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 103/205 (50%), Gaps = 7/205 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R  +  +K+ M  +++  G  IP T++ +     V++R LD  G + +  G    + + +
Sbjct: 92  RIQIRGKKIEMRSIFSPNGELIPATLIEI--MPNVIYRFLDF-GKVGIAYGKPLDESRWI 148

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP  G  + V  + K           + +L  G +   SY    + V+V G++ GKGF 
Sbjct: 149 LKPEIGQIAKVGCNYKNTCSLTLTPPQNFVL--GQIIDVSYLYNYKYVNVRGLSKGKGFC 206

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F     THG S  HR  GS G     GRV K KKM G+ G    T+ NL+++ 
Sbjct: 207 GVIKRWGFRRGPMTHGSS-HHRKPGSIGASTHIGRVLKGKKMPGKHGNKYRTMINLKLLG 265

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           ++ +R  ILV GC+PG  +NS++ V
Sbjct: 266 LNLERNEILVSGCIPG-NRNSYVTV 289


>gi|57505356|ref|ZP_00371285.1| ribosomal protein L3 [Campylobacter upsaliensis RM3195]
 gi|57016492|gb|EAL53277.1| ribosomal protein L3 [Campylobacter upsaliensis RM3195]
          Length = 192

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 65/100 (65%), Gaps = 2/100 (2%)

Query: 98  FSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRV 157
              S     +++ V+  + G+G+SG MKRHNFGG  A+HG S  HR HGS G R+ PGRV
Sbjct: 83  LDESPLNEAKILKVSFNSKGRGYSGVMKRHNFGGGPASHG-SRFHRRHGSIGNREWPGRV 141

Query: 158 FKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197
               KMAG+ G  +++VKN E+VS D +  ++++KG VPG
Sbjct: 142 QPGMKMAGQYGNTKISVKN-ELVSYDAENKILVLKGAVPG 180


>gi|315453735|ref|YP_004074005.1| 50S ribosomal protein L3 [Helicobacter felis ATCC 49179]
 gi|315132787|emb|CBY83415.1| 50S ribosomal protein L3 [Helicobacter felis ATCC 49179]
          Length = 190

 Score = 84.7 bits (208), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 103/200 (51%), Gaps = 32/200 (16%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57
           + +K+GM+ V  +  + +PVT+L         + + QV+V   L K    A+   AG+ K
Sbjct: 4   LVQKIGMSRV--VGAQSVPVTLLKVLESKVCEIKDKQVLVAYPLHKTHNKAI---AGQQK 58

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
             N+SK    F +           + +V +  DL P+  + S  +      +  T  T G
Sbjct: 59  KYNLSKEFNHFAT----------LDAQVTELGDL-PLEPLESAKH------IKATFYTKG 101

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           +GFSGAMKR NF G  A HG S  HR  GS G R+ PGRV K KKMAG  G  +VT  N 
Sbjct: 102 RGFSGAMKRWNFQGGPAAHG-SRFHRRLGSIGNREWPGRVQKGKKMAGHYGNEKVTCHN- 159

Query: 178 EVVSVDDKRGLILVKGCVPG 197
           EV+S D +  ++++KG V G
Sbjct: 160 EVLSFDKESKILVLKGSVVG 179


>gi|326505122|dbj|BAK02948.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 403

 Score = 84.7 bits (208), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 20/225 (8%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHL-----------------DNCQVVVHRTLDKN 44
           R G++A KLG    +  +G+++ +T+L +                  N  V+  RT +  
Sbjct: 115 RIGLIAVKLGSIPQWTNDGKKVYLTMLQVLDNHVIDYVPPEVIMSKSNNSVLKSRTKEGR 174

Query: 45  GYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
             MA+ VGA  +  +  +      F +  V PK+KL +F +  +  + P   +F+ S+F 
Sbjct: 175 LGMAI-VGALSSDPRLYTPSYLKLFENSGVPPKRKLTKFMITPNAAVQPGTPLFA-SHFR 232

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
           VG  VDV   TIG GF G MKR  F G   +HG +  HR  G+ G  +D  +  K  KMA
Sbjct: 233 VGDYVDVGAKTIGYGFQGVMKRWGFKGGPRSHGATKFHRKRGTIGSGRD-RKPIKGMKMA 291

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           G MG        L+V  +++K  ++ V+G V     + ++ V DS
Sbjct: 292 GHMGCKWRIQFGLKVWRINNKYNILYVQGPVIPGPTHCYVRVVDS 336


>gi|255321773|ref|ZP_05362928.1| 50S ribosomal protein L3 [Campylobacter showae RM3277]
 gi|255301253|gb|EET80515.1| 50S ribosomal protein L3 [Campylobacter showae RM3277]
          Length = 192

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 102/200 (51%), Gaps = 31/200 (15%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+   N     IPVT+L + N +V     + + G   V    G+AK K +    
Sbjct: 4   IVEKIGMSRTVN--NPSIPVTLLKVVNAKVC---EVSECGCAIVAYAKGKAKNKAIEGQQ 58

Query: 66  RGF--------FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
           + +        F+++ V+ K+         D D+ P+ S          +++ V+  + G
Sbjct: 59  KKYSLTAEFNKFATLQVANKE-------AGDLDISPLSSA---------KILKVSFSSKG 102

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KG+ G +KRH F G   +HG S  H+ HGS G R+ PGRV    KMAG  G  +VTVKN 
Sbjct: 103 KGYQGVVKRHGFAGGPKSHG-SRFHKRHGSIGNREWPGRVQPGMKMAGHTGNEKVTVKN- 160

Query: 178 EVVSVDDKRGLILVKGCVPG 197
           E+VS D + G++++KG V G
Sbjct: 161 EIVSFDAENGILVLKGSVAG 180


>gi|268680587|ref|YP_003305018.1| 50S ribosomal protein L3 [Sulfurospirillum deleyianum DSM 6946]
 gi|268618618|gb|ACZ12983.1| 50S ribosomal protein L3 [Sulfurospirillum deleyianum DSM 6946]
          Length = 192

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 101/193 (52%), Gaps = 15/193 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+    +    +PVT+L +   +V    ++D+N    V   +G    K ++K +
Sbjct: 4   IIEKIGMSRTIAVPS--VPVTLLRVLEAKVC---SVDENKRALVSYVSG----KKMNKAI 54

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     N+S     F   V  D     VG   S +  +  Q + V+  T G+GF+G +K
Sbjct: 55  AGQQKKYNLS---AAFNRFVTLDVTNTEVGD-LSTAPLSEAQRLKVSLNTKGRGFTGVIK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           RHNF G    HG S  HR+ GS G  + PGRV K KKM G  G  +VTV+N E+VS D +
Sbjct: 111 RHNFHGGPGGHG-SRFHRAPGSIGNCEWPGRVQKGKKMPGHYGNTQVTVQN-EIVSFDAE 168

Query: 186 RGLILVKGCVPGA 198
            G++ VKG VPGA
Sbjct: 169 NGILAVKGSVPGA 181


>gi|315639321|ref|ZP_07894483.1| 50S ribosomal protein L3 [Campylobacter upsaliensis JV21]
 gi|315480647|gb|EFU71289.1| 50S ribosomal protein L3 [Campylobacter upsaliensis JV21]
          Length = 192

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/100 (47%), Positives = 64/100 (64%), Gaps = 2/100 (2%)

Query: 98  FSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRV 157
              S     +++ V+  + G+G+SG MKRHNFGG  A+HG S  HR HGS G R+ PGRV
Sbjct: 83  LDESPLNEAKILKVSFNSKGRGYSGVMKRHNFGGGPASHG-SRFHRRHGSIGNREWPGRV 141

Query: 158 FKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197
               KMAG  G  +V+VKN E+VS D +  ++++KG VPG
Sbjct: 142 QPGMKMAGHYGNAKVSVKN-ELVSYDAENKILVLKGAVPG 180


>gi|319955856|ref|YP_004167119.1| LSU ribosomal protein l3p [Nitratifractor salsuginis DSM 16511]
 gi|319418260|gb|ADV45370.1| LSU ribosomal protein L3P [Nitratifractor salsuginis DSM 16511]
          Length = 193

 Score = 82.4 bits (202), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 99/195 (50%), Gaps = 16/195 (8%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+   ++    +PVT+L +   +V   R   ++G   V   +G    K ++K +
Sbjct: 4   IVEKIGMSRTIDVP--SVPVTLLKVVETKVCEVR---EDGKALVAYNSG----KKINKAI 54

Query: 66  RGFFSSVNVSPK-KKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
            G     +VS +  K     V +  +        S +     Q+V  +  + G+GFSG M
Sbjct: 55  EGQQKKYSVSNEFNKFMTLEVAEGTEP----GDLSTAPLAEAQVVKSSFNSKGRGFSGVM 110

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHNF G    HG S  HR+ GS G  + PGRV   +KM G  G  + TVKN EV+S D 
Sbjct: 111 KRHNFAGGPGAHG-SRFHRAPGSIGMCEWPGRVQPGQKMPGHYGNAKTTVKN-EVISFDA 168

Query: 185 KRGLILVKGCVPGAK 199
           + G++++KG VPG K
Sbjct: 169 ENGILVLKGAVPGPK 183


>gi|56753667|gb|AAW25036.1| SJCHGC01793 protein [Schistosoma japonicum]
          Length = 391

 Score = 82.4 bits (202), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 108/236 (45%), Gaps = 32/236 (13%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQ---------- 50
           R G++A KLG+  ++   G ++  TV  + DN  +      + + Y+++           
Sbjct: 94  RCGLIAIKLGVYPLWTKTGEKMDCTVFQVPDNHALRYTPPSEIDKYISLLHPRHYWLNSK 153

Query: 51  ---------------VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG 95
                          VGA  A + N       +     V PK+K+  F V  D  L P G
Sbjct: 154 RPPSWITQKRWGIQLVGAFSADLLNSLLNGVAYLKEAGVPPKRKISRFLVSPDAALKP-G 212

Query: 96  SVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGS-TGCRQDP 154
           +  S  +F VG  +D+T  TI +GF G ++R    G  A HG +  HR  GS  GC    
Sbjct: 213 TPLSVHHFRVGDYLDITARTINRGFQGVIERWGMKGGPAAHGSTKFHRRMGSAAGCG--- 269

Query: 155 GRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           G + + K+M G MG    +++ + +V ++ K GLI V G  PG   +++ L+ DS+
Sbjct: 270 GPIARGKRMPGVMGNRFRSLRGVMIVRINPKLGLIYVPGATPGP-VHAYCLLHDSW 324


>gi|198423016|ref|XP_002125651.1| PREDICTED: similar to mitochondrial ribosomal protein L3 [Ciona
           intestinalis]
          Length = 392

 Score = 82.0 bits (201), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 10/212 (4%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGY----MAVQVGAGEAK 57
           R G V  KLG+  ++  +G     T++ + +C V+  +   K  Y     AV +G   A 
Sbjct: 136 RCGAVGIKLGVHPIWFKDGTYANCTLIQIQDCHVI--KYFSKEEYNTKTAAVIIGGKNAS 193

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
               ++    F     V  K K F F + ++  L P G+  +  +F  GQ VD T  +IG
Sbjct: 194 PFYKNEKYHEFCREAGVPVKAKCFRFLISENAALKP-GTEITAMHFKPGQFVDCTAQSIG 252

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
            GF G ++R +F G  A        R  GS G  Q  G V K KKMAG++GG     + L
Sbjct: 253 YGFQGVIQRWHFAGGHARKDKKWMRRP-GSIGGSQI-GWVMKGKKMAGQLGGTNEITRGL 310

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +V+ ++ +  ++ VKG + G   N ++ + DS
Sbjct: 311 KVLRINTRYNVLYVKGRIAG-HINQFVKIADS 341


>gi|237753023|ref|ZP_04583503.1| 50s ribosomal protein l3 [Helicobacter winghamensis ATCC BAA-430]
 gi|229375290|gb|EEO25381.1| 50s ribosomal protein l3 [Helicobacter winghamensis ATCC BAA-430]
          Length = 192

 Score = 81.6 bits (200), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 46/83 (55%), Positives = 57/83 (68%), Gaps = 2/83 (2%)

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           T G+GFSG MKR NF G  A HG S  HR+ GS G R+ PGRV   KKMAG  G  +VTV
Sbjct: 100 TKGRGFSGVMKRWNFQGGPAAHG-SRFHRAPGSIGNREWPGRVQPGKKMAGHYGNEKVTV 158

Query: 175 KNLEVVSVDDKRGLILVKGCVPG 197
           +N E+VS D + G++++KG VPG
Sbjct: 159 QN-EIVSFDKEHGVLVLKGSVPG 180


>gi|39938686|ref|NP_950452.1| ribosomal protein L3 [Onion yellows phytoplasma OY-M]
 gi|42559576|sp|P60455|RL3_ONYPE RecName: Full=50S ribosomal protein L3
 gi|39721795|dbj|BAD04285.1| ribosomal protein L3 [Onion yellows phytoplasma OY-M]
          Length = 157

 Score = 81.3 bits (199), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 82/151 (54%), Gaps = 9/151 (5%)

Query: 65  MRGFFSSVNVSPKK--KLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           M G F     +PK+  K   F    + +L  L VG++ +   F VG LVDVTG + GKGF
Sbjct: 1   MLGHFKKATTAPKRFIKEINFSADVNSNLANLAVGALITNDLFQVGDLVDVTGTSKGKGF 60

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G++KRHN      +HG     R H   G         K KK+ G MG   VT++NL ++
Sbjct: 61  AGSIKRHNQSRGPESHGS----RYHRRPGSMGPIKGKLKGKKLPGHMGHETVTIQNLAIL 116

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           SVD ++ L L+KG VPG  K  +++++ + K
Sbjct: 117 SVDTEKNLFLIKGNVPGPNK-GFVIIKSAVK 146


>gi|237835099|ref|XP_002366847.1| 50S ribosomal protein L3, putative [Toxoplasma gondii ME49]
 gi|211964511|gb|EEA99706.1| 50S ribosomal protein L3, putative [Toxoplasma gondii ME49]
          Length = 377

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 93/204 (45%), Gaps = 28/204 (13%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ARK+ MT  ++ +G+  PVT+L +    +V      + G   V       +   V +P
Sbjct: 129 LLARKIDMTACFSPDGQAEPVTLLQVLPATIV---QFLEYGKAVVSYDLPRRRRLFVKRP 185

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMT--------- 115
             G    V  +     FE             +V  P+ F +GQ++DV+ +          
Sbjct: 186 TLGKLQRVGAT----GFETATV---------TVRPPNEFVLGQILDVSSLLGAKRVHVRA 232

Query: 116 --IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
              GKGF G + R  F     THG S  HR  GS G   DPGRV    +MAGR      T
Sbjct: 233 VKKGKGFQGTVSRFGFHRGPMTHG-STHHRGPGSVGAGTDPGRVLPGTRMAGRDKAKVAT 291

Query: 174 VKNLEVVSVDDKRGLILVKGCVPG 197
           V+NL V+  + K+ L++V+G VPG
Sbjct: 292 VRNLRVLGFNPKQNLLIVRGSVPG 315


>gi|221485858|gb|EEE24128.1| 50S ribosomal protein L3, putative [Toxoplasma gondii GT1]
          Length = 394

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 93/204 (45%), Gaps = 28/204 (13%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ARK+ MT  ++ +G+  PVT+L +    +V      + G   V       +   V +P
Sbjct: 146 LLARKIDMTACFSPDGQAEPVTLLQVLPATIV---QFLEYGKAVVSYDLPRRRRLFVKRP 202

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMT--------- 115
             G    V  +     FE             +V  P+ F +GQ++DV+ +          
Sbjct: 203 TLGKLQRVGAT----GFETATV---------TVRPPNEFVLGQILDVSSLLGAKRVHVRA 249

Query: 116 --IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
              GKGF G + R  F     THG S  HR  GS G   DPGRV    +MAGR      T
Sbjct: 250 VKKGKGFQGTVSRFGFHRGPMTHG-STHHRGPGSVGAGTDPGRVLPGTRMAGRDKAKVAT 308

Query: 174 VKNLEVVSVDDKRGLILVKGCVPG 197
           V+NL V+  + K+ L++V+G VPG
Sbjct: 309 VRNLRVLGFNPKQNLLIVRGSVPG 332


>gi|34558027|ref|NP_907842.1| 50S ribosomal protein L3 [Wolinella succinogenes DSM 1740]
 gi|42559590|sp|Q7M8D4|RL3_WOLSU RecName: Full=50S ribosomal protein L3
 gi|34483745|emb|CAE10742.1| 50S RIBOSOMAL PROTEIN L3 [Wolinella succinogenes]
          Length = 192

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 100/201 (49%), Gaps = 33/201 (16%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLH---------LDNCQVVVHRTLDKNGYMAVQVGAGEA 56
           +  K+GM+   ++     PVT+L          L N + +V     K+   A++   G+ 
Sbjct: 4   LVEKIGMSRTISVPS--TPVTLLKVKDAKVCEVLGNGKALVAYAQGKDANKAIE---GQQ 58

Query: 57  KVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116
           K  N+SK     F+++ V+  +         D D+ P+              V V+  T 
Sbjct: 59  KKYNLSKEFN-RFATLEVANGE-------AGDQDVAPLAQAVR---------VKVSLQTK 101

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           G+GF+G MKR NF G  A HG     R+ GS G R+ PGRV   KKMAG+ G  +VTV+N
Sbjct: 102 GRGFTGVMKRWNFAGGPAAHGHRFKRRT-GSIGNREWPGRVQPGKKMAGQYGNEKVTVQN 160

Query: 177 LEVVSVDDKRGLILVKGCVPG 197
            E+VS D +  ++++KG +PG
Sbjct: 161 -EIVSFDAENKILVLKGSIPG 180


>gi|221503775|gb|EEE29459.1| 50S ribosomal protein L3, putative [Toxoplasma gondii VEG]
          Length = 383

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 93/204 (45%), Gaps = 28/204 (13%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ARK+ MT  ++ +G+  PVT+L +    +V      + G   V       +   V +P
Sbjct: 135 LLARKIDMTACFSPDGQAEPVTLLQVLPATIV---QFLEYGKAVVSYDLPRRRRLFVKRP 191

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMT--------- 115
             G    V  +     FE             +V  P+ F +GQ++DV+ +          
Sbjct: 192 TLGKLQRVGAT----GFETATV---------TVRPPNEFVLGQILDVSSLLGAKRVHVRA 238

Query: 116 --IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
              GKGF G + R  F     THG S  HR  GS G   DPGRV    +MAGR      T
Sbjct: 239 VKKGKGFQGTVSRFGFHRGPMTHG-STHHRGPGSVGAGTDPGRVLPGTRMAGRDKAKVAT 297

Query: 174 VKNLEVVSVDDKRGLILVKGCVPG 197
           V+NL V+  + K+ L++V+G VPG
Sbjct: 298 VRNLRVLGFNPKQNLLIVRGSVPG 321


>gi|152993893|ref|YP_001359614.1| 50S ribosomal protein L3 [Sulfurovum sp. NBC37-1]
 gi|151425754|dbj|BAF73257.1| 50S ribosomal protein L3 [Sulfurovum sp. NBC37-1]
          Length = 193

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/192 (33%), Positives = 102/192 (53%), Gaps = 14/192 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+   ++    +PVT+L + + +V     + ++G   V   +     K ++K +
Sbjct: 4   IVEKIGMSRTVDVP--SVPVTLLKVVDTKVC---EVKEDGKALVAYNSS----KKLNKSI 54

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G  +   VS  K+  +F   +  +    G + +P+       V  +  T G+GFSG MK
Sbjct: 55  EGQQTKFGVS--KEFNKFMTIEVAEGTEAGDL-NPAALAEAAAVKTSLNTKGRGFSGGMK 111

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           RHNFGG   +HG     R  GS G  + PGRV K KKM G+ G  +VTVKN +VVS D +
Sbjct: 112 RHNFGGGPGSHGHRFGRRI-GSIGNAEWPGRVQKGKKMPGQYGNTKVTVKN-DVVSFDAE 169

Query: 186 RGLILVKGCVPG 197
            G++++KG +PG
Sbjct: 170 NGILVLKGSIPG 181


>gi|15645932|ref|NP_208111.1| 50S ribosomal protein L3 [Helicobacter pylori 26695]
 gi|108563689|ref|YP_628005.1| 50S ribosomal protein L3 [Helicobacter pylori HPAG1]
 gi|208435216|ref|YP_002266882.1| ribosomal protein L3 [Helicobacter pylori G27]
 gi|210135476|ref|YP_002301915.1| 50S ribosomal protein L3 [Helicobacter pylori P12]
 gi|217032072|ref|ZP_03437572.1| hypothetical protein HPB128_16g32 [Helicobacter pylori B128]
 gi|298735656|ref|YP_003728181.1| 50S ribosomal protein L3 [Helicobacter pylori B8]
 gi|2500226|sp|P56031|RL3_HELPY RecName: Full=50S ribosomal protein L3
 gi|2314481|gb|AAD08358.1| ribosomal protein L3 (rpl3) [Helicobacter pylori 26695]
 gi|107837462|gb|ABF85331.1| ribosomal protein L3 [Helicobacter pylori HPAG1]
 gi|208433145|gb|ACI28016.1| ribosomal protein L3 [Helicobacter pylori G27]
 gi|210133444|gb|ACJ08435.1| 50S ribosomal protein L3 [Helicobacter pylori P12]
 gi|216946220|gb|EEC24828.1| hypothetical protein HPB128_16g32 [Helicobacter pylori B128]
 gi|298354845|emb|CBI65717.1| large subunit ribosomal protein L3 [Helicobacter pylori B8]
 gi|317010002|gb|ADU80582.1| 50S ribosomal protein L3 [Helicobacter pylori India7]
 gi|317178058|dbj|BAJ55847.1| 50S ribosomal protein L3 [Helicobacter pylori F16]
          Length = 191

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 100/200 (50%), Gaps = 31/200 (15%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57
           + +K+GM+    I+    PVT+L         L+N + +V   + K    A++   G+ K
Sbjct: 4   LVQKIGMS--RTIDANSTPVTLLKVLQAKVCQLENGKALVAYAMHKKHNKAIE---GQQK 58

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
              +SK     F+++  S +K+L +  +   + L  V + F                T G
Sbjct: 59  KYQLSKEF-NHFATLKASQQKELGDLDLSALETLKRVKASFK---------------TKG 102

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           +GF+G MKR NF G  A HG S  HR  GS G R+ PGRV K +KMAG  G   VT +N 
Sbjct: 103 RGFAGVMKRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN- 160

Query: 178 EVVSVDDKRGLILVKGCVPG 197
           EV+S D +  ++++KG V G
Sbjct: 161 EVLSFDKESMVLVLKGSVAG 180


>gi|207091947|ref|ZP_03239734.1| 50S ribosomal protein L3 [Helicobacter pylori HPKX_438_AG0C1]
          Length = 191

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 100/200 (50%), Gaps = 31/200 (15%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57
           + +K+GM+    I+    PVT+L         L+N + +V   + K    A++   G+ K
Sbjct: 4   LVQKIGMS--RTIDANSTPVTLLKVLQAKVCQLENGKALVAYAMHKKHNKAIE---GQQK 58

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
              +SK     F+++  S +K+L +  +   + L  V + F                T G
Sbjct: 59  KYQLSKEF-NHFATLKASQQKELGDLDLSALETLKRVKASFK---------------TKG 102

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           +GF+G MKR NF G  A HG S  HR  GS G R+ PGRV K +KMAG  G   VT +N 
Sbjct: 103 RGFAGVMKRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN- 160

Query: 178 EVVSVDDKRGLILVKGCVPG 197
           EV+S D +  ++++KG V G
Sbjct: 161 EVLSFDKESMVLVLKGSVAG 180


>gi|254779861|ref|YP_003057967.1| 50S ribosomal protein L3 [Helicobacter pylori B38]
 gi|254001773|emb|CAX30004.1| 50S ribosomal subunit protein L3 [Helicobacter pylori B38]
          Length = 191

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 100/200 (50%), Gaps = 31/200 (15%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57
           + +K+GM+    I+    PVT+L         L+N + +V   + K    A++   G+ K
Sbjct: 4   LVQKIGMS--RTIDANSTPVTLLKVLQAKVCQLENGKALVAYAMHKKHNKAIE---GQQK 58

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
              +SK     F+++  S +K+L +  +   + L  V + F                T G
Sbjct: 59  KYQLSKEF-NHFATLKASQQKELGDLDLSTLETLKRVKASFK---------------TKG 102

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           +GF+G MKR NF G  A HG S  HR  GS G R+ PGRV K +KMAG  G   VT +N 
Sbjct: 103 RGFAGVMKRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN- 160

Query: 178 EVVSVDDKRGLILVKGCVPG 197
           EV+S D +  ++++KG V G
Sbjct: 161 EVLSFDKESMVLVLKGSVAG 180


>gi|109946759|ref|YP_663987.1| 50S ribosomal protein L3 [Helicobacter acinonychis str. Sheeba]
 gi|109713980|emb|CAJ98988.1| 50S ribosomal protein L3 [Helicobacter acinonychis str. Sheeba]
 gi|317011519|gb|ADU85266.1| 50S ribosomal protein L3 [Helicobacter pylori SouthAfrica7]
          Length = 191

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 100/200 (50%), Gaps = 31/200 (15%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57
           + +K+GM+    I+    PVT+L         L+N + +V   + K    A++   G+ K
Sbjct: 4   LVQKIGMS--RTIDANSTPVTLLKVLQAKVCQLENGKALVAYAMHKKHNKAIE---GQQK 58

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
              +SK     F+++  S +K+L +  +   + L  V + F                T G
Sbjct: 59  KYQLSKEF-NHFATLKASQQKELGDLDLSALETLKRVKASFK---------------TKG 102

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           +GF+G MKR NF G  A HG S  HR  GS G R+ PGRV K +KMAG  G   VT +N 
Sbjct: 103 RGFAGVMKRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN- 160

Query: 178 EVVSVDDKRGLILVKGCVPG 197
           EV+S D +  ++++KG V G
Sbjct: 161 EVLSFDKESMVLVLKGSVAG 180


>gi|255017007|ref|ZP_05289133.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL F2-515]
          Length = 122

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 1/122 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGRKVGMTQVFTENGELIPVTVIEAAQNVVLQKKTVETDGYEAVQIGFEDKRAIL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EFR   + D   +G+      F  G ++D TG++ GKGF
Sbjct: 61  SNKPEQGHVAKANTTPKRFIREFR-DVNLDEYEIGAEVKVDVFAEGDIIDATGVSKGKGF 119

Query: 121 SG 122
            G
Sbjct: 120 QG 121


>gi|291277268|ref|YP_003517040.1| 50S ribosomal protein L3 [Helicobacter mustelae 12198]
 gi|290964462|emb|CBG40312.1| 50S ribosomal protein L3 [Helicobacter mustelae 12198]
          Length = 192

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 97/196 (49%), Gaps = 23/196 (11%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+    I+ + I VT+L + + +V     + +N    +    G+A  K ++   
Sbjct: 4   LVEKIGMSRT--IDTKSIAVTLLRVIDAKVC---EIYENKKALIAYAKGKASNKAIAGQQ 58

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV----FSPSYFTVGQLVDVTGMTIGKGFS 121
           + +    N+S +   F          L VG+        S     Q + VT  T G+GFS
Sbjct: 59  KKY----NLSKEFNRFA--------TLQVGNAEVGDLDKSALENAQRLKVTFKTKGRGFS 106

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           GAMKR NF G  A HG S  HR  GS G R+ PGRV   KKMAG  G   VT +N EVVS
Sbjct: 107 GAMKRWNFQGGPAAHG-SRFHRRLGSIGNREWPGRVQPGKKMAGHYGNETVTAQN-EVVS 164

Query: 182 VDDKRGLILVKGCVPG 197
            D +  ++++KG V G
Sbjct: 165 FDKESNILVLKGSVAG 180


>gi|94993442|ref|YP_601540.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10750]
 gi|94546950|gb|ABF36996.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10750]
          Length = 78

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/79 (58%), Positives = 57/79 (72%), Gaps = 3/79 (3%)

Query: 135 THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGC 194
            HG S  HR  GS G    P RVFKNK++AGRMGGNRVTV+NLE+V V  ++ +ILVKG 
Sbjct: 2   AHG-SRYHRRPGSMGP-VAPNRVFKNKRLAGRMGGNRVTVQNLEIVQVIPEKNVILVKGN 59

Query: 195 VPGAKKNSWILVRDSFKSA 213
           VPGAKK S I ++ + K+A
Sbjct: 60  VPGAKK-SLITIKSAVKAA 77


>gi|15612304|ref|NP_223957.1| 50S ribosomal protein L3 [Helicobacter pylori J99]
 gi|7674309|sp|Q9ZJR4|RL3_HELPJ RecName: Full=50S ribosomal protein L3
 gi|4155816|gb|AAD06790.1| 50S RIBOSOMAL PROTEIN L3 [Helicobacter pylori J99]
          Length = 191

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 100/200 (50%), Gaps = 31/200 (15%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57
           + +K+GM+    I+    PVT+L         L+N + +V   + K    A++   G+ K
Sbjct: 4   LVQKIGMS--RTIDANSTPVTLLKVLQAKVCQLENGKALVAYAMHKKYNKAIE---GQQK 58

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
              +SK     F+++  S +K+L +  +   + L  V + F                T G
Sbjct: 59  KYQLSKEF-NHFATLKASQQKELGDLDLSALETLKRVKASFK---------------TKG 102

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           +GF+G MKR NF G  A HG S  HR  GS G R+ PGRV K +KMAG  G   VT +N 
Sbjct: 103 RGFAGVMKRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN- 160

Query: 178 EVVSVDDKRGLILVKGCVPG 197
           EV+S D +  ++++KG V G
Sbjct: 161 EVLSFDKESMVLVLKGSVAG 180


>gi|242309319|ref|ZP_04808474.1| 50s ribosomal protein L3 [Helicobacter pullorum MIT 98-5489]
 gi|239523890|gb|EEQ63756.1| 50s ribosomal protein L3 [Helicobacter pullorum MIT 98-5489]
          Length = 192

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/83 (53%), Positives = 56/83 (67%), Gaps = 2/83 (2%)

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           T G+GFSG MKR NF G    HG S  HR+ GS G R+ PGRV   KKMAG  G  +VTV
Sbjct: 100 TKGRGFSGVMKRWNFQGGPGAHG-SRFHRAPGSIGNREWPGRVQPGKKMAGHYGNEKVTV 158

Query: 175 KNLEVVSVDDKRGLILVKGCVPG 197
           +N E++S D + G++++KG VPG
Sbjct: 159 QN-EIISFDKEHGVLVLKGSVPG 180


>gi|170596208|ref|XP_001902682.1| Mitochondrial 39S ribosomal protein L3 [Brugia malayi]
 gi|158589507|gb|EDP28470.1| Mitochondrial 39S ribosomal protein L3, putative [Brugia malayi]
          Length = 424

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 107/241 (44%), Gaps = 38/241 (15%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGY--------------- 46
           R G++ARK+GM   + ++G R   T+L      V+    +D   Y               
Sbjct: 111 RIGMLARKIGMFPQWAVDGTRFLCTLLEFPKNLVI--SAIDPETYYRISMVGRRKAYGRY 168

Query: 47  ---MAVQVGAGEAKVKNVSKPMRGFFSSVNVS-------------P-KKKLFEFRVQKDD 89
                V VGA +      +   R  F    V+             P KK +  F V +D 
Sbjct: 169 GARWRVTVGAVDGDPTKFTARYRATFERHGVNFVAVFIFLILSGFPVKKHIASFLVTEDA 228

Query: 90  DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTG 149
            + P G+     +F VGQ + +TG TI  GF G M R  F G+ A  G + SHR  G+ G
Sbjct: 229 VVQP-GTELHVCHFKVGQYITITGHTIDWGFQGGMHRWGFKGMPA-RGTTKSHRRIGAIG 286

Query: 150 CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            + D  RV   K+M G MG    ++  LEV+ ++ ++ ++ V G VPG +    +L++D 
Sbjct: 287 SKGD-ARVRPGKRMPGHMGYEWRSIPGLEVLRINPEKQVMYVNGSVPG-ETGEILLIKDC 344

Query: 210 F 210
           +
Sbjct: 345 Y 345


>gi|188528107|ref|YP_001910794.1| 50S ribosomal protein L3 [Helicobacter pylori Shi470]
 gi|308183429|ref|YP_003927556.1| 50S ribosomal protein L3 [Helicobacter pylori PeCan4]
 gi|188144347|gb|ACD48764.1| 50S ribosomal protein L3 [Helicobacter pylori Shi470]
 gi|308065614|gb|ADO07506.1| 50S ribosomal protein L3 [Helicobacter pylori PeCan4]
          Length = 191

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 31/200 (15%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57
           + +K+GM+    I+    PVT+L         L+N + +V   + K    A++   G+ K
Sbjct: 4   LVQKIGMS--RTIDANSTPVTLLKVLQAKVCQLENGKALVAYAMHKKHNKAIE---GQQK 58

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
              +SK     F+++  S +K+L +  +   + L  V + F                T G
Sbjct: 59  KYQLSKEF-NHFATLKASQQKELGDLDLSALETLKRVKASFK---------------TKG 102

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           +GF+G MKR NF G  A HG S  HR  GS G R+ PGRV K +KMAG  G   VT +N 
Sbjct: 103 RGFAGVMKRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN- 160

Query: 178 EVVSVDDKRGLILVKGCVPG 197
           EV+S D +  ++ +KG V G
Sbjct: 161 EVLSFDKESMVLALKGSVAG 180


>gi|71027797|ref|XP_763542.1| 50S ribosomal protein L3 [Theileria parva strain Muguga]
 gi|68350495|gb|EAN31259.1| 50S ribosomal protein L3, putative [Theileria parva]
          Length = 161

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 13/132 (9%)

Query: 88  DDDLLPVGSVFSPSYFTVGQLVDV-----------TGMTIGKGFSGAMKRHNFGGLRATH 136
           + +  PV  +  P  + +GQLVDV           TG+T GKGF G +KRH F     +H
Sbjct: 22  EAETFPV-KLQPPQDYVLGQLVDVSSFVGCTHAKVTGITKGKGFQGTIKRHGFKRGPMSH 80

Query: 137 GVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP 196
           G S  HR  GS G    PG V   K+MAGRMGG R T + L+++ ++ +  L+ +KG V 
Sbjct: 81  G-SKHHRGPGSIGASTTPGCVKPGKRMAGRMGGKRCTFRKLKILGLNPETSLLYLKGLVA 139

Query: 197 GAKKNSWILVRD 208
           G K +   +  D
Sbjct: 140 GPKGSYVTVTSD 151


>gi|317014710|gb|ADU82146.1| 50S ribosomal protein L3 [Helicobacter pylori Gambia94/24]
          Length = 191

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 31/200 (15%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57
           + +K+GM+    I+    PVT+L         L+N + +V   + K    A++   G+ K
Sbjct: 4   LVQKIGMS--RTIDANSTPVTLLKVLQAKVCQLENGKALVAYAMHKKHNKAIE---GQQK 58

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
              +SK     F+++  S +++L +  +   + L  V + F                T G
Sbjct: 59  KYQLSKEF-NHFATLKASQQQELGDLDLSALETLKRVKASFK---------------TKG 102

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           +GF+G MKR NF G  A HG S  HR  GS G R+ PGRV K +KMAG  G   VT +N 
Sbjct: 103 RGFAGVMKRWNFQGGPAAHG-SRFHRHPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN- 160

Query: 178 EVVSVDDKRGLILVKGCVPG 197
           EV+S D +  ++++KG V G
Sbjct: 161 EVLSFDKESMVLVLKGSVAG 180


>gi|217033636|ref|ZP_03439064.1| hypothetical protein HP9810_899g72 [Helicobacter pylori 98-10]
 gi|216943982|gb|EEC23416.1| hypothetical protein HP9810_899g72 [Helicobacter pylori 98-10]
 gi|261840034|gb|ACX99799.1| 50S ribosomal protein L3 [Helicobacter pylori 52]
 gi|307637990|gb|ADN80440.1| LSU ribosomal protein L3p:L3e [Helicobacter pylori 908]
 gi|308062604|gb|ADO04492.1| 50S ribosomal protein L3 [Helicobacter pylori Cuz20]
 gi|315587208|gb|ADU41589.1| 50S ribosomal protein L3 [Helicobacter pylori 35A]
 gi|317013106|gb|ADU83714.1| 50S ribosomal protein L3 [Helicobacter pylori Lithuania75]
 gi|317178390|dbj|BAJ56178.1| 50S ribosomal protein L3 [Helicobacter pylori F30]
 gi|317181041|dbj|BAJ58827.1| 50S ribosomal protein L3 [Helicobacter pylori F32]
 gi|317182565|dbj|BAJ60349.1| 50S ribosomal protein L3 [Helicobacter pylori F57]
 gi|325996595|gb|ADZ52000.1| 50S ribosomal protein L3 [Helicobacter pylori 2018]
 gi|325998185|gb|ADZ50393.1| 50S ribosomal protein L3 [Helicobacter pylori 2017]
          Length = 191

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 31/200 (15%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57
           + +K+GM+    I+    PVT+L         L+N + +V   + K    A++   G+ K
Sbjct: 4   LVQKIGMS--RTIDANSTPVTLLKVLQAKVCQLENGKALVAYAMHKKHNKAIE---GQQK 58

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
              +SK     F+++  S +++L +  +   + L  V + F                T G
Sbjct: 59  KYQLSKEF-NHFATLKASQQQELGDLDLSALETLKRVKASFK---------------TKG 102

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           +GF+G MKR NF G  A HG S  HR  GS G R+ PGRV K +KMAG  G   VT +N 
Sbjct: 103 RGFAGVMKRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN- 160

Query: 178 EVVSVDDKRGLILVKGCVPG 197
           EV+S D +  ++++KG V G
Sbjct: 161 EVLSFDKESMVLVLKGSVAG 180


>gi|115749008|ref|XP_001195229.1| PREDICTED: similar to mitochondrial ribosomal protein L3
           [Strongylocentrotus purpuratus]
 gi|115922520|ref|XP_001179143.1| PREDICTED: similar to mitochondrial ribosomal protein L3
           [Strongylocentrotus purpuratus]
          Length = 343

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 4/145 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYM---AVQVGAGEAKV 58
           R+GV+A KLGM  ++  EG+R+P T+L +  C V+       NG      V V A  A  
Sbjct: 114 RAGVIAIKLGMQPLWTKEGKRVPTTLLQVLECNVIDFHPQGLNGSDRPGTVLVAAKNAPP 173

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
               +     F SV +  K+ +  F V  +  L P G+    ++F  G  VD+   TI K
Sbjct: 174 YYKDEEYADLFKSVCLPVKEHITSFNVTDNAALQP-GTPLYAAHFRPGMYVDIAAKTIDK 232

Query: 119 GFSGAMKRHNFGGLRATHGVSISHR 143
           GF G MKR    G  A+HG + +HR
Sbjct: 233 GFQGVMKRWGMKGQPASHGATKTHR 257


>gi|308185071|ref|YP_003929204.1| 50S ribosomal protein L3 [Helicobacter pylori SJM180]
 gi|308060991|gb|ADO02887.1| 50S ribosomal protein L3 [Helicobacter pylori SJM180]
          Length = 191

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 31/200 (15%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57
           + +K+GM+    I+    PVT+L         L+N + +V   + K    A++   G+ K
Sbjct: 4   LVQKIGMS--RTIDANSTPVTLLKVLQAKVCQLENGKALVAYAMHKKYNKAIE---GQQK 58

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
              +SK     F+++  S +++L +  +   + L  V + F                T G
Sbjct: 59  KYQLSKEF-NHFATLKASQQQELGDLDLSALETLKRVKASFK---------------TKG 102

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           +GF+G MKR NF G  A HG S  HR  GS G R+ PGRV K +KMAG  G   VT +N 
Sbjct: 103 RGFAGVMKRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN- 160

Query: 178 EVVSVDDKRGLILVKGCVPG 197
           EV+S D +  ++++KG V G
Sbjct: 161 EVLSFDKESMVLVLKGSVAG 180


>gi|261838638|gb|ACX98404.1| ribosomal protein L3 [Helicobacter pylori 51]
          Length = 191

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 31/200 (15%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57
           + +K+GM+    I+    PVT+L         L+N + +V   + K    A++   G+ K
Sbjct: 4   LVQKIGMS--RTIDANSTPVTLLKVLQAKVCQLENGKALVAYAMHKKYNKAIE---GQQK 58

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
              +SK     F+++  S +++L +  +   + L  V + F                T G
Sbjct: 59  KYQLSKEF-NHFATLKASQQQELGDLDLSTLETLKRVKASFK---------------TKG 102

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           +GF+G MKR NF G  A HG S  HR  GS G R+ PGRV K +KMAG  G   VT +N 
Sbjct: 103 RGFAGVMKRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN- 160

Query: 178 EVVSVDDKRGLILVKGCVPG 197
           EV+S D +  ++++KG V G
Sbjct: 161 EVLSFDKESMVLVLKGSVAG 180


>gi|297380500|gb|ADI35387.1| 50S ribosomal protein L3 [Helicobacter pylori v225d]
          Length = 191

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 99/200 (49%), Gaps = 31/200 (15%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57
           + +K+GM+    I+    PVT+L         L+N + +V   + K    A++   G+ K
Sbjct: 4   LVQKIGMS--RTIDANSTPVTLLKVLQAKVCQLENGKALVAYAMHKKHNKAIE---GQQK 58

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
              +SK     F+++  S +++L +  +   + L  V + F                T G
Sbjct: 59  KYQLSKEF-NHFATLKASQQQELGDLDLSALETLKKVKASFK---------------TKG 102

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           +GF+G MKR NF G  A HG S  HR  GS G R+ PGRV K +KMAG  G   VT +N 
Sbjct: 103 RGFAGVMKRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN- 160

Query: 178 EVVSVDDKRGLILVKGCVPG 197
           EV+S D +  ++ +KG V G
Sbjct: 161 EVLSFDKESMVLALKGSVAG 180


>gi|308064096|gb|ADO05983.1| 50S ribosomal protein L3 [Helicobacter pylori Sat464]
          Length = 191

 Score = 78.6 bits (192), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 99/200 (49%), Gaps = 31/200 (15%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57
           + +K+GM+    I+    PVT+L         L+N + +V   + K    A++   G+ K
Sbjct: 4   LVQKIGMS--RTIDANSTPVTLLKVLQAKVCQLENGKALVAYAMHKKHNKAIE---GQQK 58

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
              +SK     F+++  S +++L +  +   + L  V + F                T G
Sbjct: 59  KYQLSKEF-NHFATLKASQQQELGDLDLSALETLKRVKASFK---------------TKG 102

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           +GF+G MKR NF G  A HG S  HR  GS G R+ PGRV K +KMAG  G   VT +N 
Sbjct: 103 RGFAGVMKRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN- 160

Query: 178 EVVSVDDKRGLILVKGCVPG 197
           EV+S D +  ++ +KG V G
Sbjct: 161 EVLSFDKESMVLALKGSVAG 180


>gi|313681319|ref|YP_004059057.1| LSU ribosomal protein l3p [Sulfuricurvum kujiense DSM 16994]
 gi|313154179|gb|ADR32857.1| LSU ribosomal protein L3P [Sulfuricurvum kujiense DSM 16994]
          Length = 191

 Score = 78.6 bits (192), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 79/145 (54%), Gaps = 16/145 (11%)

Query: 59  KNVSKPMRGFFSSVNVSPK-KKLFEFRVQK----DDDLLPVGSVFSPSYFTVGQLVDVTG 113
           K+ +KP+ G     N+S +  K     V      D D+ P+ +  +         V  + 
Sbjct: 47  KSTNKPVEGQQKKYNLSAEFNKFATLEVANTEAGDLDMAPLANATT---------VKSSF 97

Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
            T G+GF+G MKR NF G    HG    HR+ GS G R+ PG+V K +KM+G+ G  +VT
Sbjct: 98  NTKGRGFTGVMKRWNFAGGPGAHGHRF-HRTGGSIGNREWPGKVQKGRKMSGQYGDEQVT 156

Query: 174 VKNLEVVSVDDKRGLILVKGCVPGA 198
           VKN EV+S D + G+++V G +PGA
Sbjct: 157 VKN-EVMSYDAENGVLVVVGSIPGA 180


>gi|85000981|ref|XP_955209.1| 50S ribosomal protein L3 [Theileria annulata strain Ankara]
 gi|65303355|emb|CAI75733.1| 50S ribosomal protein L3, putative [Theileria annulata]
          Length = 328

 Score = 78.6 bits (192), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 48/111 (43%), Positives = 61/111 (54%), Gaps = 12/111 (10%)

Query: 100 PSYFTVGQLVDV-----------TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148
           P  + +GQLVDV           TG+T GKGF G +KRH F     +HG S  HR  GS 
Sbjct: 200 PQDYVLGQLVDVSSFVGCTHAKVTGITKGKGFQGVIKRHGFKRGPMSHG-SKHHRRPGSI 258

Query: 149 GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAK 199
           G    PG V   KKM GRMGG R T + L+++ ++ +  L+ VKG V G K
Sbjct: 259 GASTTPGCVKPGKKMPGRMGGKRCTFRKLKILGLNPETSLLYVKGHVAGPK 309


>gi|237751236|ref|ZP_04581716.1| 50S ribosomal protein L3 [Helicobacter bilis ATCC 43879]
 gi|229372602|gb|EEO22993.1| 50S ribosomal protein L3 [Helicobacter bilis ATCC 43879]
          Length = 197

 Score = 78.2 bits (191), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/192 (36%), Positives = 101/192 (52%), Gaps = 15/192 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           + +K+GM+ +  I      VT+L + N +V     L++NG   V    G    K  +K +
Sbjct: 4   IVQKVGMSRI--IATPSQAVTLLKVLNAKVC---KLEENGKALVAYSKG----KTCNKSI 54

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     N+S  K+   F   K  +   VG +   S  + G++V     T G+GFSGAMK
Sbjct: 55  EGNQKKYNLS--KEFNRFATLKVANT-EVGDL-DMSSLSDGKVVKAGFKTKGRGFSGAMK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF G  A HG S  HR  GS G R+ PGRV   KKMAG  G   V+V++ E++S D +
Sbjct: 111 RWNFQGGPAAHG-SRFHRRLGSIGNREWPGRVQPGKKMAGHYGDEIVSVRS-EIISFDTQ 168

Query: 186 RGLILVKGCVPG 197
            G++++KG V G
Sbjct: 169 SGILVLKGSVAG 180


>gi|224417885|ref|ZP_03655891.1| 50S ribosomal protein L3 [Helicobacter canadensis MIT 98-5491]
 gi|253827224|ref|ZP_04870109.1| 50S ribosomal protein L3 [Helicobacter canadensis MIT 98-5491]
 gi|313141427|ref|ZP_07803620.1| 50S ribosomal protein L3 [Helicobacter canadensis MIT 98-5491]
 gi|253510630|gb|EES89289.1| 50S ribosomal protein L3 [Helicobacter canadensis MIT 98-5491]
 gi|313130458|gb|EFR48075.1| 50S ribosomal protein L3 [Helicobacter canadensis MIT 98-5491]
          Length = 192

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/83 (51%), Positives = 55/83 (66%), Gaps = 2/83 (2%)

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           T G+GFSG MKR NF G    HG S  HR+ GS G R+ PGRV   KKMAG  G  +VTV
Sbjct: 100 TKGRGFSGVMKRWNFQGGPGAHG-SRFHRAPGSIGNREWPGRVQPGKKMAGHYGNEKVTV 158

Query: 175 KNLEVVSVDDKRGLILVKGCVPG 197
           +N E++S D +  ++++KG VPG
Sbjct: 159 QN-EIISFDKENNVLVLKGSVPG 180


>gi|322378779|ref|ZP_08053208.1| 50S ribosomal protein L3 [Helicobacter suis HS1]
 gi|322380628|ref|ZP_08054780.1| 50S ribosomal protein L3 [Helicobacter suis HS5]
 gi|321146950|gb|EFX41698.1| 50S ribosomal protein L3 [Helicobacter suis HS5]
 gi|321148809|gb|EFX43280.1| 50S ribosomal protein L3 [Helicobacter suis HS1]
          Length = 194

 Score = 76.3 bits (186), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 97/202 (48%), Gaps = 36/202 (17%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57
           + +K+GM+ +  +    +PVT+L         +   Q++V   L K    A+   AG+ K
Sbjct: 4   LVQKIGMSRI--VGASSVPVTLLKVLDSKVCEIKEGQLLVAYALHKKHNKAI---AGQQK 58

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMT 115
              +S+    F +           +  V+   DL   P+  V         Q +  T  T
Sbjct: 59  KYQLSQEFNHFAT----------LKGHVEAVGDLSIEPLEGV---------QYIKATFYT 99

Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
            G+GFSGAMKR NF G  A HG S  HR  GS G R+ PGRV K KKMAG  G  +VT  
Sbjct: 100 KGRGFSGAMKRWNFQGGPAAHG-SRFHRRLGSIGNREWPGRVQKGKKMAGHYGNEKVTCH 158

Query: 176 NLEVVSVDDKRGLILVKGCVPG 197
           N +V+S D +  ++++KG   G
Sbjct: 159 N-QVLSFDKENKILVLKGSTAG 179


>gi|156083276|ref|XP_001609122.1| ribosomal protein L3 domain containing protein [Babesia bovis T2Bo]
 gi|154796372|gb|EDO05554.1| ribosomal protein L3 domain containing protein [Babesia bovis]
          Length = 323

 Score = 76.3 bits (186), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 2/115 (1%)

Query: 84  RVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHR 143
           ++Q   D + +G +   S F     V VTG+T GKGF+G +KRH F     +HG S  HR
Sbjct: 190 KLQPPQDYV-LGQILDVSAFAGCTHVKVTGITKGKGFAGVIKRHGFARGPMSHG-SKHHR 247

Query: 144 SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGA 198
             GS G    PG V   K+M GRMG  R T + L V+ ++ +  L+ VK  V GA
Sbjct: 248 KPGSIGASTTPGCVKPGKRMPGRMGNKRCTFRKLRVLGINPETSLMYVKALVAGA 302


>gi|161616466|ref|YP_001590431.1| hypothetical protein SPAB_04281 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161365830|gb|ABX69598.1| hypothetical protein SPAB_04281 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 72

 Score = 75.5 bits (184), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 38/59 (64%), Positives = 46/59 (77%)

Query: 140 ISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGA 198
           +SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV VD +R L+LVKG VPGA
Sbjct: 1   MSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAERNLLLVKGGVPGA 59


>gi|152989972|ref|YP_001355694.1| 50S ribosomal protein L3 [Nitratiruptor sp. SB155-2]
 gi|151421833|dbj|BAF69337.1| 50S ribosomal protein L3 [Nitratiruptor sp. SB155-2]
          Length = 192

 Score = 75.1 bits (183), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 25/197 (12%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+   ++    +PVT+L +   +V     L + G   V    G+ +    +K +
Sbjct: 4   IVEKIGMSRTISVPS--VPVTLLKVKEAKVC---ELLEGGKAIVAYSQGKKR----NKAI 54

Query: 66  RGFFSSVNVSPK-KKLFEFRVQK----DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            G      +SP+  +  + +V      D D+ P+            + +  +  + G+GF
Sbjct: 55  EGQQKKYGLSPEFNRFIKLKVTNTEAGDLDVTPLSEA---------KRIKTSFNSKGRGF 105

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG +KR NFGG   +HG S  HR+ GS G  + PGR+   +KM G+ G  +VTV+N EVV
Sbjct: 106 SGVVKRWNFGGGPDSHG-SRFHRAPGSVGMCEWPGRIMPGQKMPGQYGNKKVTVQN-EVV 163

Query: 181 SVDDKRGLILVKGCVPG 197
           S D +  +++VKG +PG
Sbjct: 164 SFDPENMILVVKGSIPG 180


>gi|307720136|ref|YP_003891276.1| 50S ribosomal protein L3P [Sulfurimonas autotrophica DSM 16294]
 gi|306978229|gb|ADN08264.1| LSU ribosomal protein L3P [Sulfurimonas autotrophica DSM 16294]
          Length = 191

 Score = 75.1 bits (183), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 62/111 (55%), Gaps = 11/111 (9%)

Query: 88  DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGS 147
           D DL P+    +         V  T  T G+GFSGAMKR NFGG  A+HG     R+ GS
Sbjct: 81  DLDLAPLADASA---------VKTTFNTKGRGFSGAMKRWNFGGGPASHGHRFGRRT-GS 130

Query: 148 TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGA 198
            G  + PGRV K KKM G+ G  + +VKN E+VS D +  +I V G V GA
Sbjct: 131 IGNAEWPGRVMKGKKMPGQYGNTQNSVKN-EIVSFDAENKIIAVLGSVSGA 180


>gi|118474609|ref|YP_891244.1| 50S ribosomal protein L3 [Campylobacter fetus subsp. fetus 82-40]
 gi|118413835|gb|ABK82255.1| ribosomal protein L3 [Campylobacter fetus subsp. fetus 82-40]
          Length = 192

 Score = 75.1 bits (183), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/91 (48%), Positives = 58/91 (63%), Gaps = 2/91 (2%)

Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166
           +++ V+  T G+GF G +KRH F G  A+HG S  HR  GS G  + PGRV   +KMAG 
Sbjct: 92  KVLKVSFNTKGRGFQGVIKRHGFSGGPASHG-SRFHRRPGSIGNCEWPGRVQPGRKMAGH 150

Query: 167 MGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197
            G  + TVKN EVVS D   G++++KG VPG
Sbjct: 151 YGNEKTTVKN-EVVSFDSANGILVLKGSVPG 180


>gi|86152355|ref|ZP_01070565.1| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85840652|gb|EAQ57904.1| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 260.94]
          Length = 170

 Score = 74.7 bits (182), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 43/77 (55%), Positives = 52/77 (67%), Gaps = 2/77 (2%)

Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166
           +++ V+  T G+G+SG MKRHNF G  A+HG S  HR HGS G R+ PGRV    KMAG 
Sbjct: 91  KILKVSFNTKGRGYSGVMKRHNFAGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGH 149

Query: 167 MGGNRVTVKNLEVVSVD 183
            G  +VTVKN EVVS D
Sbjct: 150 YGNTKVTVKN-EVVSYD 165


>gi|42559687|sp|Q9AIN8|RL3_CARRU RecName: Full=50S ribosomal protein L3
 gi|13310845|gb|AAK18637.1|AF250389_3 ribosomal protein L3 [Candidatus Carsonella ruddii]
          Length = 136

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/125 (40%), Positives = 69/125 (55%), Gaps = 13/125 (10%)

Query: 77  KKKLFEFRVQKDDDLLPVGSVFSPSY--FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRA 134
           KKKL+ F V K        S F+  Y  F + +++ +   + GKGF G +KR NF     
Sbjct: 14  KKKLYIFNVIKF-------SKFNKFYLNFIINKILLIC-YSKGKGFQGVVKRWNFKTKDK 65

Query: 135 THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGC 194
           +HG S+S+R+ GSTG  QDPGRVFK KKM GRMG  + +   L V     K+    +K  
Sbjct: 66  SHGNSLSYRTLGSTGQCQDPGRVFKKKKMPGRMGNKKFS---LFVNIFFRKKNYFFLKKI 122

Query: 195 VPGAK 199
           +PG K
Sbjct: 123 LPGVK 127


>gi|157737003|ref|YP_001489686.1| 50S ribosomal protein L3 [Arcobacter butzleri RM4018]
 gi|315636195|ref|ZP_07891449.1| 50S ribosomal protein L3 [Arcobacter butzleri JV22]
 gi|157698857|gb|ABV67017.1| 50S ribosomal protein L3 [Arcobacter butzleri RM4018]
 gi|315479556|gb|EFU70235.1| 50S ribosomal protein L3 [Arcobacter butzleri JV22]
          Length = 191

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/92 (47%), Positives = 61/92 (66%), Gaps = 2/92 (2%)

Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166
           ++V  T  T G+GFSGA+KR NF G RA+HG  +  R+ GS G  + PGRV   KKM G+
Sbjct: 91  KVVKSTFKTKGRGFSGAVKRWNFAGGRASHGHRMGKRT-GSIGNCEWPGRVQPGKKMPGQ 149

Query: 167 MGGNRVTVKNLEVVSVDDKRGLILVKGCVPGA 198
            G   V+VKN E++S D + G++++KG V GA
Sbjct: 150 YGNTNVSVKN-EIISFDAETGILVLKGSVSGA 180


>gi|296272640|ref|YP_003655271.1| 50S ribosomal protein L3 [Arcobacter nitrofigilis DSM 7299]
 gi|296096814|gb|ADG92764.1| 50S ribosomal protein L3 [Arcobacter nitrofigilis DSM 7299]
          Length = 191

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 95/197 (48%), Gaps = 26/197 (13%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLH-LDN--CQVV--VHRTLDKNGYMAVQVGAGEAKVKN 60
           +  K+GM+   ++    +PVT+L  LD   C+V   V      NG    +   G+ K  N
Sbjct: 4   IVEKIGMSRTVSVPA--VPVTLLKVLDTKVCEVTDGVAIVSYSNGKKFNKTIEGQQKKYN 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SK    F +           E    +  DL         S     +++  T  T G+GF
Sbjct: 62  LSKEFNRFAT----------MEVANSEAGDL-------DVSGLAEAKILKTTFKTKGRGF 104

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SGA+KR NF G RA+HG  +  R+ GS G  + PGRV   KKM G+ G   V+VKN E+ 
Sbjct: 105 SGAVKRWNFAGGRASHGHRMGKRT-GSIGNAEWPGRVQPGKKMPGQYGNTNVSVKN-EIF 162

Query: 181 SVDDKRGLILVKGCVPG 197
           S D + G++ VKG V G
Sbjct: 163 SFDAETGILAVKGSVSG 179


>gi|13310854|gb|AAK18645.1|AF250390_3 ribosomal protein L3 [Candidatus Carsonella ruddii]
          Length = 136

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%), Gaps = 3/91 (3%)

Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
           + ++ ++ GKGF+G +K+ NF     +HG S+S+R+ GS G  QDPGRVFK KKM G+MG
Sbjct: 40  LKISSISKGKGFAGVIKKWNFKTKDKSHGCSLSYRTLGSVGQCQDPGRVFKGKKMPGKMG 99

Query: 169 GNRVTVKNLEVVSVDDKRGLILVKGCVPGAK 199
             ++T     V     K  +  +K  +PG+K
Sbjct: 100 NKKIT---FFVNIFLRKNDIFFIKTIIPGSK 127


>gi|146319921|ref|YP_001199632.1| ribosomal protein L3 [Streptococcus suis 98HAH33]
 gi|145690727|gb|ABP91232.1| Ribosomal protein L3 [Streptococcus suis 98HAH33]
          Length = 78

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/78 (55%), Positives = 54/78 (69%), Gaps = 3/78 (3%)

Query: 135 THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGC 194
            HG S  HR  GS G    P RVFK K +AGRMGGNRVT++NLEVV V  ++ +IL+KG 
Sbjct: 2   AHG-SRYHRRPGSMGP-VAPNRVFKGKNLAGRMGGNRVTIQNLEVVQVVPEKNVILIKGN 59

Query: 195 VPGAKKNSWILVRDSFKS 212
           VPGAKK S I ++ + K+
Sbjct: 60  VPGAKK-SLITIKSAVKA 76


>gi|169929958|gb|ACB05656.1| 50S ribosomal protein L3 [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 94

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 50/84 (59%), Gaps = 1/84 (1%)

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           GKG  G +KRH F G  A HG S   R  GS G    PGRVFK  KM GRMG  + TV+N
Sbjct: 3   GKGTQGVVKRHGFAGGPAGHG-SRFQRHPGSIGSNTTPGRVFKGLKMGGRMGSEQTTVRN 61

Query: 177 LEVVSVDDKRGLILVKGCVPGAKK 200
           L+VV +D    L+ V G VPG ++
Sbjct: 62  LKVVKIDADANLVFVSGPVPGRER 85


>gi|154148794|ref|YP_001405697.1| 50S ribosomal protein L3 [Campylobacter hominis ATCC BAA-381]
 gi|153804803|gb|ABS51810.1| ribosomal protein L3 [Campylobacter hominis ATCC BAA-381]
          Length = 191

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 96/195 (49%), Gaps = 22/195 (11%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDN---CQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           +  K+GM+    I+   IPVT+L + N   C+V        +G   V    G+A     +
Sbjct: 4   IVEKIGMS--RTIDNPSIPVTLLRVVNAKICEV-------NDGKAVVAYANGKA----FN 50

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K + G     N+S +   F     ++ +   VG   S   F   + V  +  + G+G+ G
Sbjct: 51  KAIAGIQKKYNLSKEFNKFATLCVENAE---VGDQ-SIEIFNNAKFVKSSFTSKGRGYQG 106

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G   +HG S  HR HGS G  + PGRV    +MAG MG  +VTVKN E+V  
Sbjct: 107 VMKRHGFAGGPKSHG-SRFHRRHGSIGNCEWPGRVQPGMRMAGHMGNVKVTVKN-EIVKF 164

Query: 183 DDKRGLILVKGCVPG 197
           D +  ++++KG V G
Sbjct: 165 DAENRILVLKGAVAG 179


>gi|124487970|gb|ABN12068.1| mitochondrial ribosomal protein L3-llike protein [Maconellicoccus
           hirsutus]
          Length = 170

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 1/109 (0%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
            +F VG  VDV G+TI +GF G MKR  F G  ATHG + +HR  G+ G  +D  +V   
Sbjct: 6   PHFKVGDYVDVRGLTIQRGFQGVMKRWGFHGQPATHGQTKTHRRPGTIGRGRD-KKVQIG 64

Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           KK+ G MG    T++ L+++ ++ K  +I V+G       NS + V D+
Sbjct: 65  KKLPGHMGYRYRTLRGLQILRMNTKYNVIWVQGQAIAGDTNSIVYVYDT 113


>gi|78776487|ref|YP_392802.1| 50S ribosomal protein L3 [Sulfurimonas denitrificans DSM 1251]
 gi|78497027|gb|ABB43567.1| LSU ribosomal protein L3P [Sulfurimonas denitrificans DSM 1251]
          Length = 191

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 96/198 (48%), Gaps = 26/198 (13%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+    +  +  PVT+L + + +V      + +  +A + G      K ++K +
Sbjct: 4   IVEKIGMSRTITVPSK--PVTLLRVLDAKVC--EVNENSAIVAYKSG------KKMNKAI 53

Query: 66  RGFFSSVNVSPK-KKLFEFRVQK----DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            G     ++S +  +     V      D DL P+            +++  T  T G+GF
Sbjct: 54  EGQQKKYSISSEFNRFVTLEVANSEAGDIDLTPLAEA---------KVIKATFTTKGRGF 104

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NF G  A HG     R+ GS G  + PGRV K KKM G+ G  + +VKN E++
Sbjct: 105 TGAMKRWNFSGGPAEHGHRFGRRT-GSIGNAEWPGRVMKGKKMPGQYGNTQNSVKN-EII 162

Query: 181 SVDDKRGLILVKGCVPGA 198
           S D +  +I V G V GA
Sbjct: 163 SFDAENKIIAVVGSVSGA 180


>gi|116335057|ref|YP_802552.1| ribosomal protein L3 [Candidatus Carsonella ruddii PV]
 gi|13272299|gb|AAK17082.1|AF274444_12 ribosomal protein L3 [Candidatus Carsonella ruddii]
 gi|116235338|dbj|BAF35186.1| ribosomal protein L3 [Candidatus Carsonella ruddii PV]
          Length = 136

 Score = 72.8 bits (177), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 60/100 (60%), Gaps = 4/100 (4%)

Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166
           + + +  ++ GKGF+G +K+ NF     +HG S+S+R+ GS G  QDPGRVFK KKM G+
Sbjct: 38  KTLKIISISKGKGFAGVIKKWNFKTKDKSHGCSLSYRTLGSVGQCQDPGRVFKGKKMPGK 97

Query: 167 MGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206
           MG  + T     V     K+ +  +K  +PG+ KN ++ V
Sbjct: 98  MGNKKNT---FFVDVFLRKKNIFFIKKIIPGS-KNDYLYV 133


>gi|313631759|gb|EFR98952.1| ribosomal protein L3 [Listeria seeligeri FSL N1-067]
          Length = 93

 Score = 72.8 bits (177), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 2/81 (2%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G ++D TG++ GKGF G +KRH        HG S  HR  GS G    P RVFKNK 
Sbjct: 8   FAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKL 65

Query: 163 MAGRMGGNRVTVKNLEVVSVD 183
           + GRMGG ++T++NLE+V VD
Sbjct: 66  LPGRMGGEQITIQNLEIVKVD 86


>gi|32262929|gb|AAP77975.1| ribosomal protein L3 [Helicobacter hepaticus ATCC 51449]
          Length = 183

 Score = 71.2 bits (173), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 43/89 (48%), Positives = 55/89 (61%), Gaps = 2/89 (2%)

Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
           V V+  T G+GFSGAMKR NF G    HG S  HR  GS G R+ PGRV   KKMAG  G
Sbjct: 85  VQVSFKTKGRGFSGAMKRWNFQGGPGAHG-SRFHRRLGSIGNREWPGRVQPGKKMAGHYG 143

Query: 169 GNRVTVKNLEVVSVDDKRGLILVKGCVPG 197
              V+ KN +++S D +  ++++KG V G
Sbjct: 144 NELVSAKN-DIMSFDKQSAILVLKGSVAG 171


>gi|161546624|ref|NP_860909.2| 50S ribosomal protein L3 [Helicobacter hepaticus ATCC 51449]
 gi|42559601|sp|Q7VGE4|RL3_HELHP RecName: Full=50S ribosomal protein L3
          Length = 192

 Score = 71.2 bits (173), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 43/89 (48%), Positives = 55/89 (61%), Gaps = 2/89 (2%)

Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
           V V+  T G+GFSGAMKR NF G    HG S  HR  GS G R+ PGRV   KKMAG  G
Sbjct: 94  VQVSFKTKGRGFSGAMKRWNFQGGPGAHG-SRFHRRLGSIGNREWPGRVQPGKKMAGHYG 152

Query: 169 GNRVTVKNLEVVSVDDKRGLILVKGCVPG 197
              V+ KN +++S D +  ++++KG V G
Sbjct: 153 NELVSAKN-DIMSFDKQSAILVLKGSVAG 180


>gi|257458708|ref|ZP_05623832.1| 50S ribosomal protein L3 [Campylobacter gracilis RM3268]
 gi|257443897|gb|EEV19016.1| 50S ribosomal protein L3 [Campylobacter gracilis RM3268]
          Length = 192

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 15/192 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+    I+    PVT+L L N ++      D+   + V    G+A  K ++   
Sbjct: 4   IVEKIGMS--RTIDTSSTPVTLLRLINTKIC--EVCDEKKAI-VAYADGKAYNKAIAGIQ 58

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
           + +  S   +    L     +  D  L V         +  ++V V+  + GKG+ G +K
Sbjct: 59  KKYSLSKEFNKFATLSLENAELGDQNLDV--------LSEAKIVKVSFRSKGKGYQGVIK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           RH F G  A HG S  HR  GS G  + PGRV    +MAG  G   +T KN EVVS D +
Sbjct: 111 RHGFAGGPAAHG-SRFHRRPGSIGNCEWPGRVQPGMRMAGHTGNETITAKN-EVVSFDAE 168

Query: 186 RGLILVKGCVPG 197
             ++++KG VPG
Sbjct: 169 NKILVLKGSVPG 180


>gi|66766345|dbj|BAD99041.1| ribosomal protein L3 [Desulfovibrio vulgaris]
          Length = 115

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 1/110 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT ++  +G  + VTV+    C V+  R  + +GY AVQ+   EAK K+V+K
Sbjct: 6   GILGRKVGMTRIFASDGSAVAVTVIQAGPCPVIQVRNGETDGYDAVQIAFEEAKEKHVTK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113
           P RG F+       + L E R++   +   VG   + S F  G+ V VTG
Sbjct: 66  PARGHFAKAGKGLFRNLREIRLEAPAE-FEVGQELTVSLFAAGEKVKVTG 114


>gi|153803653|ref|ZP_01958239.1| ribosomal protein L3 [Vibrio cholerae MZO-3]
 gi|124120812|gb|EAY39555.1| ribosomal protein L3 [Vibrio cholerae MZO-3]
          Length = 93

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 54/88 (61%)

Query: 4  GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
          G++ RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   V+K
Sbjct: 3  GLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGSKKANRVTK 62

Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL 91
          P  G F+   V   + L+EFR++  ++ 
Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLENGEEF 90


>gi|224437283|ref|ZP_03658255.1| 50S ribosomal protein L3 [Helicobacter cinaedi CCUG 18818]
 gi|313143738|ref|ZP_07805931.1| 50S ribosomal protein L3 [Helicobacter cinaedi CCUG 18818]
 gi|313128769|gb|EFR46386.1| 50S ribosomal protein L3 [Helicobacter cinaedi CCUG 18818]
          Length = 192

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/89 (50%), Positives = 55/89 (61%), Gaps = 2/89 (2%)

Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
           V V   T G+GFSGAMKR NF G  A HG S  HR  GS G R+ PGRV   KKMAG  G
Sbjct: 94  VQVRFKTKGRGFSGAMKRWNFQGGPAAHG-SRFHRRLGSIGNREWPGRVQPGKKMAGHYG 152

Query: 169 GNRVTVKNLEVVSVDDKRGLILVKGCVPG 197
              V+ KN +V+S D +  ++++KG V G
Sbjct: 153 NELVSGKN-DVMSFDKESAILVLKGSVAG 180


>gi|146319920|ref|YP_001199631.1| 50S ribosomal protein L3 [Streptococcus suis 98HAH33]
 gi|145690726|gb|ABP91231.1| 50S ribosomal protein L3 [Streptococcus suis 98HAH33]
          Length = 112

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 64/113 (56%), Gaps = 3/113 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYAAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113
            +KP +G  +  N +PK+ + EF   K+ + L VG   +   F  G +VDVTG
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGQEITVETFAAGDVVDVTG 110


>gi|581341|emb|CAA78677.1| ribosomal protein L3 [Mycobacterium leprae]
          Length = 100

 Score = 68.6 bits (166), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 54/88 (61%)

Query: 2  RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
          R G++  KLGMT V++   R +PVTV+      V   RTL+++GY AVQ+  GE   + V
Sbjct: 4  RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTLERDGYSAVQLAYGEISPRKV 63

Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDD 89
          +KP+ G ++S  V+P++ L E R+   D
Sbjct: 64 NKPVTGQYNSAGVNPRRYLAELRLDHPD 91


>gi|255017639|ref|ZP_05289765.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL F2-515]
          Length = 79

 Score = 68.6 bits (166), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/78 (48%), Positives = 54/78 (69%), Gaps = 3/78 (3%)

Query: 135 THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGC 194
            HG S  HR  GS G    P RVFKNK + GRMGG ++T++NLE+V VD ++ ++LVKG 
Sbjct: 4   AHG-SRYHRRPGSMGP-VAPNRVFKNKLLPGRMGGEQITIQNLEIVKVDVEKNVLLVKGN 61

Query: 195 VPGAKKNSWILVRDSFKS 212
           VPGAKK + + ++ + K+
Sbjct: 62  VPGAKK-ALVQIKTATKA 78


>gi|70951495|ref|XP_744983.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56525155|emb|CAH78805.1| hypothetical protein PC001313.02.0 [Plasmodium chabaudi chabaudi]
          Length = 185

 Score = 68.6 bits (166), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 4/139 (2%)

Query: 79  KLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGV 138
           K+ EF+    D  LPV   FS  +F+ GQ + ++     KGF GAM++ NF G   +HG 
Sbjct: 1   KIREFKCT-SDCFLPVQHKFSARHFSPGQNLFISSSIKNKGFCGAMQKWNFSGKNQSHGT 59

Query: 139 -SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEVVSVDDKRGLILVKGCVP 196
            S +HRS GS    +    VF+NKKM   +G    V   N ++  ++  + L+ +KG + 
Sbjct: 60  ESKAHRSLGSVSMGKTINIVFRNKKMNTHIGEKSLVKCSNNKLFRINSLKNLLFIKGTI- 118

Query: 197 GAKKNSWILVRDSFKSAVN 215
           G  KN  I + D+   A N
Sbjct: 119 GGYKNKIIKISDAKGRAFN 137


>gi|314984921|gb|EFT29013.1| 50S ribosomal protein L3 domain protein [Propionibacterium acnes
          HL005PA1]
          Length = 89

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 46/75 (61%)

Query: 4  GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
          GV+  KLGMT +++   R +PVTV+    C V   RT + +GY AVQ+G G  K KNV+K
Sbjct: 14 GVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKNVTK 73

Query: 64 PMRGFFSSVNVSPKK 78
          P  G F    V+P++
Sbjct: 74 PEAGHFEKAGVTPRR 88


>gi|182418827|ref|ZP_02950092.1| 50S ribosomal protein L3 [Clostridium butyricum 5521]
 gi|182377324|gb|EDT74885.1| 50S ribosomal protein L3 [Clostridium butyricum 5521]
          Length = 77

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 1/71 (1%)

Query: 135 THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGC 194
           THG S  HR+ GS G   DP R FKNK+M G MG    TV NL+VV V  ++ LIL+KG 
Sbjct: 2   THG-SKFHRAPGSMGASSDPSRTFKNKRMPGHMGSVNTTVLNLQVVKVIAEKNLILIKGG 60

Query: 195 VPGAKKNSWIL 205
           +PG  K + ++
Sbjct: 61  IPGPNKGTVVI 71


>gi|213416462|ref|ZP_03349606.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 97

 Score = 65.5 bits (158), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 12/106 (11%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+K
Sbjct: 3   GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
           P  G F+   V   + L+EFR+ + ++            +TVGQ +
Sbjct: 63  PEAGHFAKAGVEAGRGLWEFRLAEGEE------------YTVGQSI 96


>gi|227871804|ref|ZP_03990207.1| possible ribosomal protein L3 [Oribacterium sinus F0268]
 gi|227842340|gb|EEJ52567.1| possible ribosomal protein L3 [Oribacterium sinus F0268]
          Length = 81

 Score = 65.5 bits (158), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 50/80 (62%)

Query: 1  MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
          M+  ++A K+GMT +++  G  IPVTVL    C V   +TL+ +GY AVQVG  E + K 
Sbjct: 1  MKKAILATKVGMTQIWDENGVLIPVTVLQAGPCVVTQVKTLENDGYKAVQVGFLEKREKL 60

Query: 61 VSKPMRGFFSSVNVSPKKKL 80
          V+KP++G F    VS K+ L
Sbjct: 61 VNKPLKGQFDKAGVSYKRFL 80


>gi|212724032|ref|NP_001132440.1| hypothetical protein LOC100193892 [Zea mays]
 gi|194694386|gb|ACF81277.1| unknown [Zea mays]
          Length = 232

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 3/123 (2%)

Query: 4   GVVARKLGMTCVYNIE-GRRIPVTVLHL-DNCQVVVH-RTLDKNGYMAVQVGAGEAKVKN 60
           GV+A K+GM   ++ E G+ +PVTV+   +   VV   +T   +GY AVQVG    +   
Sbjct: 46  GVMATKVGMMTYFDPETGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVREDK 105

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G        P + L EFR+   D   P   +     F  G L+DV+G +IGKGF
Sbjct: 106 LTRPELGHLGKAGAPPLRHLQEFRLTAVDAFEPGQPLDFADLFKEGDLIDVSGNSIGKGF 165

Query: 121 SGA 123
            G+
Sbjct: 166 QGS 168


>gi|209528359|ref|ZP_03276810.1| 50S ribosomal protein L3 [Arthrospira maxima CS-328]
 gi|209491212|gb|EDZ91616.1| 50S ribosomal protein L3 [Arthrospira maxima CS-328]
          Length = 79

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 1/63 (1%)

Query: 135 THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGC 194
            HG S +HR  GS G    PGRV+  KKMAGR GG ++T + L +V +D +R L+L+KG 
Sbjct: 1   AHG-SKNHRLPGSIGPGTTPGRVYPGKKMAGRYGGKQITTRKLTIVRIDLERNLLLIKGS 59

Query: 195 VPG 197
           +PG
Sbjct: 60  IPG 62


>gi|149195353|ref|ZP_01872439.1| 50S ribosomal protein L3 [Caminibacter mediatlanticus TB-2]
 gi|149134485|gb|EDM22975.1| 50S ribosomal protein L3 [Caminibacter mediatlanticus TB-2]
          Length = 192

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 94/194 (48%), Gaps = 17/194 (8%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+    +  + IPVT+L +   +V     + ++G   V    G    K V+KP+
Sbjct: 4   IVEKIGMS--RTVGEKSIPVTLLKIVPAKVC---EVKEDGKALVAYPKG----KKVNKPI 54

Query: 66  RGFFSSVNVSPK-KKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
            G      +S +  +  E +V   +         S       + V +T  + G+GF G +
Sbjct: 55  EGMQKKYGLSKEFNRFVELKVANTE-----AGDLSLEPLNEAKKVKITFKSKGRGFQGVV 109

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR+ FGG   +H  S  HR+ GS G  + PGRV   KKM G  G   VTV N EVV  + 
Sbjct: 110 KRYGFGGGPGSH-GSRFHRAPGSIGNCEFPGRVMPGKKMPGHYGNKNVTV-NAEVVEFNP 167

Query: 185 KRGLILVKGCVPGA 198
             G++++KG VPGA
Sbjct: 168 DMGVLVIKGSVPGA 181


>gi|154340798|ref|XP_001566352.1| ribosomal protein L3-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134063675|emb|CAM39860.1| ribosomal protein L3-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 467

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 93/219 (42%), Gaps = 8/219 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKVK 59
           +R G+V  K+     Y+  G +   T     + Q+V H T + + G   V VGA    V+
Sbjct: 129 VRFGMVGVKVFTCKDYDDLGNQFDCTAFWFPDNQIVKHSTRNGDVGTDKVYVGAMNVPVE 188

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
                +  F+ +  V  K     F V  D    PVG+     +F  GQ V +T      G
Sbjct: 189 FHKPHVAAFYKAAGVPVKHVSAGFPVTPDA-YAPVGTKLDVRHFKPGQEVTITFQNTDYG 247

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           + G M RH F G     G S   R  G  G  +   R++   +MAG+ G +  T + + V
Sbjct: 248 YQGVMFRHGFDGGYVWLGDSKWQRRPGCMGA-EGQKRIYPGHRMAGQTGASAETYQGVPV 306

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
             +D K  LI +   +  A   +++  RD+    +N KG
Sbjct: 307 WRIDYKNSLIYLPTLI-DADVGTYVKFRDT----INTKG 340


>gi|296090209|emb|CBI40028.3| unnamed protein product [Vitis vinifera]
          Length = 99

 Score = 62.0 bits (149), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/78 (47%), Positives = 44/78 (56%), Gaps = 1/78 (1%)

Query: 78  KKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHG 137
           + L EFR+   D   P   +     F  G LVDV+G+TIGKGF G +KRHNF     THG
Sbjct: 2   RHLQEFRLVSVDGFEPNQKLVFEELFKEGDLVDVSGITIGKGFQGGIKRHNFRRGPMTHG 61

Query: 138 VSISHRSHGSTGCRQDPG 155
            S SHR+ GS G    PG
Sbjct: 62  -SKSHRALGSIGAGTTPG 78


>gi|207108256|ref|ZP_03242418.1| 50S ribosomal protein L3 [Helicobacter pylori HPKX_438_CA4C1]
          Length = 128

 Score = 61.6 bits (148), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 2/76 (2%)

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR NF G  A HG S  HR  GS G R+ PGRV K +KMAG  G   VT +N EV+S
Sbjct: 44  GVMKRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLS 101

Query: 182 VDDKRGLILVKGCVPG 197
            D +  ++++KG V G
Sbjct: 102 FDKESMVLVLKGSVAG 117


>gi|146092753|ref|XP_001466509.1| ribosomal protein L3-like protein [Leishmania infantum]
 gi|134070872|emb|CAM69548.1| ribosomal protein L3-like protein [Leishmania infantum JPCM5]
          Length = 467

 Score = 61.2 bits (147), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 93/220 (42%), Gaps = 10/220 (4%)

Query: 1   MRSGVVARKLGMTCV-YNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKV 58
           +R G++  K   TC  Y+  G +   T     + Q+V H T + + G   V VGA    V
Sbjct: 129 VRFGMIGVK-AFTCKDYDDLGNQFDCTAFWFPDNQIVKHSTRNGDVGTDKVYVGAMNVPV 187

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           +     +  F+ +  V  K     F V  D    PVG+     +F  GQ V +T      
Sbjct: 188 EFHKPHVAAFYKAAGVPVKHVSAGFPVTPDA-YAPVGTKLDVRHFKPGQEVTITFQNTDY 246

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           G+ G M RH F G     G S   R  G  G  +   R++   +MAG+ G +  T   + 
Sbjct: 247 GYQGVMFRHGFDGGYVWLGDSKWQRRPGCMGA-EGQKRIYPGHRMAGQTGASAETYDGVP 305

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           V  +D K  LI +   +  A   +++  RD+    +N KG
Sbjct: 306 VWRIDYKNSLIYLPTLI-DADVGTYVKFRDT----INTKG 340


>gi|73536476|ref|XP_847662.1| ribosomal protein L3-like protein [Leishmania major strain
           Friedlin]
 gi|321438575|emb|CBZ12334.1| ribosomal protein L3-like protein [Leishmania major strain
           Friedlin]
          Length = 467

 Score = 61.2 bits (147), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 93/220 (42%), Gaps = 10/220 (4%)

Query: 1   MRSGVVARKLGMTCV-YNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKV 58
           +R G++  K   TC  Y+  G +   T     + Q+V H T + + G   V VGA    V
Sbjct: 129 VRFGMIGVK-AFTCKDYDDLGNQFDCTAFWFPDNQIVKHSTRNGDVGTDKVYVGAMNVPV 187

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           +     +  F+ +  V  K     F V  D    PVG+     +F  GQ V +T      
Sbjct: 188 EFHKPHVAAFYKAAGVPVKHVSAGFPVTPDA-YAPVGTKLDVRHFKPGQEVTITFQNTDY 246

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           G+ G M RH F G     G S   R  G  G  +   R++   +MAG+ G +  T   + 
Sbjct: 247 GYQGVMFRHGFDGGYVWLGDSKWQRRPGCMGA-EGQKRIYPGHRMAGQTGASAETYDGVP 305

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           V  +D K  LI +   +  A   +++  RD+    +N KG
Sbjct: 306 VWRIDYKNSLIYLPTLI-DADVGTYVKFRDT----INTKG 340


>gi|322500651|emb|CBZ35728.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 467

 Score = 61.2 bits (147), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 93/220 (42%), Gaps = 10/220 (4%)

Query: 1   MRSGVVARKLGMTCV-YNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKV 58
           +R G++  K   TC  Y+  G +   T     + Q+V H T + + G   V VGA    V
Sbjct: 129 VRFGMIGVK-AFTCKDYDELGNQFDCTAFWFPDNQIVKHSTRNGDVGTDKVYVGAMNVPV 187

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           +     +  F+ +  V  K     F V  D    PVG+     +F  GQ V +T      
Sbjct: 188 EFHKPHVAAFYKAAGVPVKHVSAGFPVTPDA-YAPVGTKLDVRHFKPGQEVTITFQNTDY 246

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           G+ G M RH F G     G S   R  G  G  +   R++   +MAG+ G +  T   + 
Sbjct: 247 GYQGVMFRHGFDGGYVWLGDSKWQRRPGCMGA-EGQKRIYPGHRMAGQTGASAETYDGVP 305

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           V  +D K  LI +   +  A   +++  RD+    +N KG
Sbjct: 306 VWRIDYKNSLIYLPTLI-DADVGTYVKFRDT----INTKG 340


>gi|322488784|emb|CBZ24031.1| ribosomal protein L3-like protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 467

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 93/220 (42%), Gaps = 10/220 (4%)

Query: 1   MRSGVVARKLGMTCV-YNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKV 58
           +R G++  K   TC  Y+  G +   T     + Q+V H T + + G   V VGA    V
Sbjct: 129 VRFGLIGVK-AFTCKDYDDLGNQFDCTAFWFPDNQIVKHSTRNGDVGTDKVYVGAMNVPV 187

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           +     +  F+ +  V  K     F +  D    PVG+     +F  GQ V +T      
Sbjct: 188 EFHKPHVAAFYKAAGVPVKHVSAGFPITPDA-YAPVGTKLDVRHFKPGQEVTITFQNTDY 246

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           G+ G M RH F G     G S   R  G  G  +   R++   +MAG+ G +  T   + 
Sbjct: 247 GYQGVMFRHGFDGGYVWLGDSKWQRRPGCMGA-EGQKRIYPGHRMAGQTGASAETYDGVP 305

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           V  +D K  LI +   +  A   +++  RD+    +N KG
Sbjct: 306 VWRIDYKNSLIYLPTLI-DADVGTYVKFRDT----INTKG 340


>gi|169929919|gb|ACB05630.1| 50S ribosomal protein L3 [Leptospira borgpetersenii serovar
           Hardjo-bovis]
 gi|169929922|gb|ACB05632.1| 50S ribosomal protein L3 [Leptospira borgpetersenii serovar
           Hardjo-bovis]
 gi|169929955|gb|ACB05654.1| 50S ribosomal protein L3 [Leptospira meyeri serovar Ranarum]
          Length = 93

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 1/82 (1%)

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           G+GF G +KRH   G    H  S  HR  GS G    P RVFK  K+ GR G  + TV+N
Sbjct: 3   GRGFQGVVKRHGHAGGPGGH-GSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQQTTVRN 61

Query: 177 LEVVSVDDKRGLILVKGCVPGA 198
           L+VV +++++ L+ V G VPG 
Sbjct: 62  LKVVRINEEKNLVFVSGAVPGT 83


>gi|224373649|ref|YP_002608021.1| 50S ribosomal protein L3 [Nautilia profundicola AmH]
 gi|223589482|gb|ACM93218.1| ribosomal protein L3 [Nautilia profundicola AmH]
          Length = 191

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 54/90 (60%), Gaps = 2/90 (2%)

Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
           V +T  + G+GF G +KRH F G    H  S  HR+ GS G  + PGRV   +KM G+ G
Sbjct: 93  VKLTFKSKGRGFQGVVKRHGFAGGPGGH-GSRFHRAPGSIGNCEWPGRVMPGRKMPGQYG 151

Query: 169 GNRVTVKNLEVVSVDDKRGLILVKGCVPGA 198
              VTV N EV+  D+  G++++KG VPGA
Sbjct: 152 NKNVTV-NAEVLEYDENMGVLVIKGSVPGA 180


>gi|71411062|ref|XP_807797.1| mitochondrial ribosomal protein L3 [Trypanosoma cruzi strain CL
           Brener]
 gi|70871872|gb|EAN85946.1| mitochondrial ribosomal protein L3, putative [Trypanosoma cruzi]
          Length = 473

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 92/220 (41%), Gaps = 10/220 (4%)

Query: 1   MRSGVVARKLGMTCV-YNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKV 58
           +R G+V  K   TC  Y+  G +   T     + Q+V H T + + G   V VGA    V
Sbjct: 136 VRFGMVGVK-AFTCKDYDELGNQFDCTAFWFPDNQIVRHSTRNGDVGTDRVYVGAMNVPV 194

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           +     +  F+ +  V  K     F +  D    PVG+     +F  GQ V +T      
Sbjct: 195 EFHKPHVAAFYKAAGVPVKHVCAGFPITPDA-YAPVGTKLDVRHFKPGQEVTITFQNTDY 253

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G M RH F G     G S   R  G  G  +   R++   +MAG+ G +  T + + 
Sbjct: 254 GFRGVMFRHGFDGGYVWLGDSKWQRRPGCMGT-EGQKRIYPGHRMAGQTGASAETYQGVP 312

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           V  +D K  LI +   +  A   +++     F   +N KG
Sbjct: 313 VWRIDYKNALIYLPTLI-DADVGTYV----KFSDTINTKG 347


>gi|322821701|gb|EFZ27955.1| mitochondrial ribosomal protein L3, putative [Trypanosoma cruzi]
          Length = 425

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 92/220 (41%), Gaps = 10/220 (4%)

Query: 1   MRSGVVARKLGMTCV-YNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKV 58
           +R G+V  K   TC  Y+  G +   T     + Q+V H T + + G   V VGA    V
Sbjct: 88  VRFGMVGVK-AFTCKDYDELGNQFDCTAFWFPDNQIVRHSTRNGDVGTDRVYVGAMNVPV 146

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           +     +  F+ +  V  K     F +  D    PVG+     +F  GQ V +T      
Sbjct: 147 EFHKPHVAAFYKAAGVPVKHVCAGFPITPDA-YAPVGTKLDVRHFKPGQEVTITFQNTDY 205

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G M RH F G     G S   R  G  G  +   R++   +MAG+ G +  T + + 
Sbjct: 206 GFRGVMFRHGFDGGYVWLGDSKWQRRPGCMGT-EGQKRIYPGHRMAGQTGASAETYQGVP 264

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           V  +D K  LI +   +  A   +++     F   +N KG
Sbjct: 265 VWRIDYKNALIYLPTLI-DADVGTYV----KFSDTINTKG 299


>gi|242052021|ref|XP_002455156.1| hypothetical protein SORBIDRAFT_03g005220 [Sorghum bicolor]
 gi|241927131|gb|EES00276.1| hypothetical protein SORBIDRAFT_03g005220 [Sorghum bicolor]
          Length = 144

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 46/68 (67%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GV+  K GM+ +++  G ++P+TVL +D+  V   +T +K G+ A+Q+GAG+ K K++
Sbjct: 71  RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVTQVKTAEKEGFFALQLGAGQKKEKHL 130

Query: 62  SKPMRGFF 69
            KP  G F
Sbjct: 131 PKPEVGHF 138


>gi|169929907|gb|ACB05622.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Lai]
 gi|169929910|gb|ACB05624.1| 50S ribosomal protein L3 [Leptospira interrogans serovar
           Icterohaemorrhagiae]
 gi|169929913|gb|ACB05626.1| 50S ribosomal protein L3 [Leptospira interrogans serovar
           Hardjo-prajitno]
 gi|169929916|gb|ACB05628.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Malaya]
 gi|169929943|gb|ACB05646.1| 50S ribosomal protein L3 [Leptospira kirschneri serovar Mozdok]
 gi|169929946|gb|ACB05648.1| 50S ribosomal protein L3 [Leptospira kirschneri serovar Bim]
          Length = 93

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 1/82 (1%)

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           G+G+ G +KRH   G    H  S  HR  GS G    P RVFK  K+ GR G  + TV+N
Sbjct: 3   GRGYQGVVKRHGHAGGPGAH-GSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQKTTVRN 61

Query: 177 LEVVSVDDKRGLILVKGCVPGA 198
           L+VV +++++ L+ V G VPG 
Sbjct: 62  LKVVRINEEKNLLFVSGAVPGT 83


>gi|169929931|gb|ACB05638.1| 50S ribosomal protein L3 [Leptospira noguchii serovar Proechymis]
 gi|169929934|gb|ACB05640.1| 50S ribosomal protein L3 [Leptospira noguchii serovar Panama]
          Length = 93

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 1/82 (1%)

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           G+G+ G +KRH   G    H  S  HR  GS G    P RVFK  K+ GR G  + TV+N
Sbjct: 3   GRGYQGVVKRHGHAGGPGAH-GSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQQTTVRN 61

Query: 177 LEVVSVDDKRGLILVKGCVPGA 198
           L+VV +++++ L+ V G VPG 
Sbjct: 62  LKVVRINEEKNLLFVSGAVPGT 83


>gi|72387453|ref|XP_844151.1| ribosomal protein L3 mitochondrial [Trypanosoma brucei TREU927]
 gi|62360659|gb|AAX81070.1| ribosomal protein L3 mitochondrial, putative [Trypanosoma brucei]
 gi|70800683|gb|AAZ10592.1| ribosomal protein L3 mitochondrial, putative [Trypanosoma brucei
           brucei strain 927/4 GUTat10.1]
 gi|261327312|emb|CBH10288.1| ribosomal protein L3 mitochondrial, putative [Trypanosoma brucei
           gambiense DAL972]
          Length = 473

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 93/222 (41%), Gaps = 14/222 (6%)

Query: 1   MRSGVVARKLGMTCV-YNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMA---VQVGAGEA 56
           +R G+V  K   TC  Y+  G +   T     + QVV H T  +NG +    V VGA   
Sbjct: 136 VRFGMVGVK-AFTCKDYDELGNQFDCTAFWFPDNQVVKHST--RNGEVGTDKVYVGAMNV 192

Query: 57  KVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116
            V+     +  F+ +  V  K     F +  D    PVG+     +F  GQ V +T    
Sbjct: 193 PVEFHKPHVAAFYKAAGVPVKHVCAGFPITPDA-YAPVGTKLDVRHFKPGQEVTITFQNT 251

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
             GF G M RH F G     G S   R  G+ G  +   R++   +MAG+ G    T + 
Sbjct: 252 DYGFRGVMFRHGFDGGYVWLGDSRWQRRPGAMGT-EGQKRIYPGHRMAGQTGAAAETYQG 310

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           + V  +D K  LI +   +  A   +++     F   +N KG
Sbjct: 311 VPVWRIDYKNSLIYLPTLL-DADVGTYV----RFSDTINTKG 347


>gi|330899737|gb|EGH31156.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. japonica str.
          M301072PT]
          Length = 77

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 44/75 (58%)

Query: 1  MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
          M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1  MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61 VSKPMRGFFSSVNVS 75
          V+    G F+  NV+
Sbjct: 61 VTAAQAGHFAKANVA 75


>gi|169929937|gb|ACB05642.1| 50S ribosomal protein L3 [Leptospira weilii serovar Sarmin]
 gi|169929940|gb|ACB05644.1| 50S ribosomal protein L3 [Leptospira weilii serovar Celledoni]
          Length = 93

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 1/82 (1%)

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           G+GF G +KRH   G    H  S  HR  GS G    P RVFK  K+ GR G  + TV+N
Sbjct: 3   GRGFQGVVKRHGHAGGPGGH-GSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSLQTTVRN 61

Query: 177 LEVVSVDDKRGLILVKGCVPGA 198
           L+VV +++++ L+ V G VPG 
Sbjct: 62  LKVVRINEEKNLVFVSGAVPGT 83


>gi|169929949|gb|ACB05650.1| 50S ribosomal protein L3 [Leptospira alexanderi serovar Mengla]
 gi|169929952|gb|ACB05652.1| 50S ribosomal protein L3 [Leptospira alexanderi serovar Manzhuang]
          Length = 93

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 1/82 (1%)

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           G+GF G +KRH   G    H  S  HR  GS G    P RVFK  K+ GR G  + TV+N
Sbjct: 3   GRGFQGVVKRHGHAGGPGGH-GSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSLQTTVRN 61

Query: 177 LEVVSVDDKRGLILVKGCVPGA 198
           L+VV +++++ L+ V G VPG 
Sbjct: 62  LKVVRINEEKNLVFVSGSVPGT 83


>gi|169929925|gb|ACB05634.1| 50S ribosomal protein L3 [Leptospira santarosai serovar Tropica]
 gi|169929928|gb|ACB05636.1| 50S ribosomal protein L3 [Leptospira santarosai serovar Shermani]
          Length = 93

 Score = 59.3 bits (142), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           G+G+ G +KRH   G    H  S  HR  GS G    P RVFK  K+ GR G  + T++N
Sbjct: 3   GRGYQGVVKRHGHAGGPGGH-GSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQQTTIRN 61

Query: 177 LEVVSVDDKRGLILVKGCVPGAK 199
           L+VV +++++ L+ V G +PG +
Sbjct: 62  LKVVRINEEKNLLFVSGSIPGTE 84


>gi|260222805|emb|CBA32730.1| hypothetical protein Csp_D33610 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 65

 Score = 58.9 bits (141), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 1/59 (1%)

Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           PGRVF  K+M G +G   VT +NL+V+ VD+ R L+L+KG +PG+ K  ++ VR + K+
Sbjct: 1   PGRVFPGKRMTGHLGDATVTTQNLDVIRVDEARQLLLIKGAIPGS-KGGFVTVRPAVKA 58


>gi|94993441|ref|YP_601539.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10750]
 gi|94546949|gb|ABF36995.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10750]
          Length = 88

 Score = 58.5 bits (140), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 50/84 (59%)

Query: 1  MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
          M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1  MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61 VSKPMRGFFSSVNVSPKKKLFEFR 84
           +KP +G  +  N +PK+ + EF+
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFK 84


>gi|293556601|ref|ZP_06675169.1| ribosomal protein L3 [Enterococcus faecium E1039]
 gi|291601277|gb|EFF31561.1| ribosomal protein L3 [Enterococcus faecium E1039]
          Length = 101

 Score = 58.2 bits (139), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 50/84 (59%)

Query: 1  MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
          M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY A+QVG  + +   
Sbjct: 1  MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQVKTMETDGYEAIQVGYQDMREVL 60

Query: 61 VSKPMRGFFSSVNVSPKKKLFEFR 84
           +KP +G  +  N +PK+ + EF+
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFK 84


>gi|171185278|ref|YP_001794197.1| 50S ribosomal protein L3P [Thermoproteus neutrophilus V24Sta]
 gi|212288414|sp|B1YD88|RL3_THENV RecName: Full=50S ribosomal protein L3P
 gi|170934490|gb|ACB39751.1| ribosomal protein L3 [Thermoproteus neutrophilus V24Sta]
          Length = 338

 Score = 58.2 bits (139), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 61/130 (46%), Gaps = 20/130 (15%)

Query: 94  VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G   SP   FT GQLVDV  +T GKG+ G +KR     L   H     HR  G+ G  Q
Sbjct: 185 LGKTVSPKEVFTAGQLVDVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIGP-Q 243

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK----------------RG-LILVKGCV 195
            P  +F   +  G+MG ++ T  N  VV + D                 RG  IL++G V
Sbjct: 244 APALMFTQPR-PGQMGFHQRTEYNKRVVKIGDNGAEITPKSGFLHYGVIRGPYILIQGTV 302

Query: 196 PGAKKNSWIL 205
           PGAKK   +L
Sbjct: 303 PGAKKRLVVL 312


>gi|41615218|ref|NP_963716.1| 50S ribosomal protein L3P [Nanoarchaeum equitans Kin4-M]
 gi|42559579|sp|P60458|RL3_NANEQ RecName: Full=50S ribosomal protein L3P
 gi|40068942|gb|AAR39277.1| NEQ433 [Nanoarchaeum equitans Kin4-M]
          Length = 321

 Score = 57.8 bits (138), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 18/125 (14%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  GQ VDV  +T GKGF G +KR  F   R  H      R  G+ G R  PGR+F    
Sbjct: 183 FKEGQYVDVIAVTKGKGFQGVIKR--FHVHRRQHKSEKGVRKVGAIGSR-GPGRIFPTVP 239

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGL--------------ILVKGCVPGAKKNSWILVRD 208
           M G+MG +R T  N  ++ + +   +              IL+KG VPG +K   I++R+
Sbjct: 240 MPGQMGYHRRTEYNKLIIKIGEPLNVEGGWVRYGQVIGPTILLKGSVPGPRKRL-IILRE 298

Query: 209 SFKSA 213
           + +  
Sbjct: 299 AIRPP 303


>gi|313111417|ref|ZP_07797222.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa 39016]
 gi|310883724|gb|EFQ42318.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa 39016]
          Length = 57

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 41/56 (73%), Gaps = 1/56 (1%)

Query: 157 VFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +FK KKM+G +G  RVTV++LE+V VD +R L+LVKG VPGA     ++VR + K+
Sbjct: 1   MFKGKKMSGHLGAERVTVQSLEIVRVDAERNLLLVKGAVPGATGGD-VIVRPAAKA 55


>gi|119873281|ref|YP_931288.1| 50S ribosomal protein L3P [Pyrobaculum islandicum DSM 4184]
 gi|212288410|sp|A1RVG3|RL3_PYRIL RecName: Full=50S ribosomal protein L3P
 gi|119674689|gb|ABL88945.1| LSU ribosomal protein L3P [Pyrobaculum islandicum DSM 4184]
          Length = 342

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 67/148 (45%), Gaps = 23/148 (15%)

Query: 94  VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G   SP   FT GQLVDV  +T GKG+ G +KR     L   H     HR  G+ G  Q
Sbjct: 189 LGKTVSPKEVFTAGQLVDVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIGP-Q 247

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCV 195
            P  +F   +  G+MG ++ T  N  ++ + D                 K   IL++G V
Sbjct: 248 APAVMFTQPR-PGQMGFHQRTEYNKRIIKIGDNGAEITPKSGFLHYGVVKGPYILIQGTV 306

Query: 196 PGAKKNSWIL---VRDSFKSAVNCKGKV 220
           PGA+K   +L   VR   K+    + +V
Sbjct: 307 PGARKRLVVLRYPVRPPKKAPPAAEPQV 334


>gi|42858|emb|CAA23634.1| ribosomal protein L3 [Escherichia coli]
          Length = 80

 Score = 56.2 bits (134), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 45/78 (57%)

Query: 4  GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
          G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K   V+K
Sbjct: 3  GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTK 62

Query: 64 PMRGFFSSVNVSPKKKLF 81
          P  G F+   V   + L+
Sbjct: 63 PEAGHFAKAGVEAGRGLW 80


>gi|301500983|ref|YP_003795448.1| ribosomal protein L3 [Alveolata sp. CCMP3155]
 gi|300069529|gb|ADJ66636.1| ribosomal protein L3 [Chromerida sp. RM11]
          Length = 209

 Score = 55.8 bits (133), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 11/114 (9%)

Query: 88  DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGS 147
           +  LLP G           +LV + G+  G GF+G + R+ F     T G S  HR+ GS
Sbjct: 100 ESALLPTGP----------RLVCIRGVGKGHGFAGVVSRYGFSRGPMTRG-SKHHRAPGS 148

Query: 148 TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKN 201
            G    P RV+  KKM GR   +R     +  + +D +  L+ ++G VPG   N
Sbjct: 149 AGAGTFPSRVYPRKKMPGRWKTSRRKYNRVRPLKLDVRHSLLWLQGSVPGKTGN 202


>gi|198477055|ref|XP_002136783.1| GA27952 [Drosophila pseudoobscura pseudoobscura]
 gi|198145102|gb|EDY71806.1| GA27952 [Drosophila pseudoobscura pseudoobscura]
          Length = 229

 Score = 55.1 bits (131), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 14/127 (11%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVV-------------VHRTLDKNGYMA 48
           R GV+ARK+G   ++   G+++  T+L + +  V+             + R  + N Y  
Sbjct: 104 RCGVIARKIGQYPLWLKNGKKVRTTLLQIADNHVIKYMPHEECRPQKNLSRVHNSNQYGC 163

Query: 49  VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQL 108
           + VGA       ++K   G F    V PKK +  F V  D  L P G+  + S F VG+ 
Sbjct: 164 LLVGAESTNPSMLTKEYCGIFRDAGVVPKKNIMRFMVSPDGALAP-GTPLNISRFRVGEY 222

Query: 109 VDVTGMT 115
           VDV G T
Sbjct: 223 VDVRGKT 229


>gi|126460189|ref|YP_001056467.1| 50S ribosomal protein L3P [Pyrobaculum calidifontis JCM 11548]
 gi|212288409|sp|A3MWI4|RL3_PYRCJ RecName: Full=50S ribosomal protein L3P
 gi|126249910|gb|ABO09001.1| LSU ribosomal protein L3P [Pyrobaculum calidifontis JCM 11548]
          Length = 338

 Score = 55.1 bits (131), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 67/148 (45%), Gaps = 23/148 (15%)

Query: 94  VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G   SP   FT GQLVDV  +T GKG+ G +KR     L   H     HR  G+ G  Q
Sbjct: 185 LGKTVSPKDVFTPGQLVDVIAVTKGKGYQGVVKRFGVTILPRWHKHRKGHRRTGTIGP-Q 243

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCV 195
            P  +F   +  G+MG ++ T  N  ++ + D                 K   IL++G V
Sbjct: 244 APALMFTQPR-PGQMGFHQRTEYNKRILKIGDNGAEITPKSGFPHYGVIKGPYILLQGSV 302

Query: 196 PGAKKNSWIL---VRDSFKSAVNCKGKV 220
           PGA+K   +L   VR   K+    + +V
Sbjct: 303 PGARKRLVVLRYPVRPPKKAPPAAEPQV 330


>gi|86154135|ref|ZP_01072334.1| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|85842375|gb|EAQ59591.1| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni HB93-13]
          Length = 144

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 36/51 (70%), Gaps = 1/51 (1%)

Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRV 157
           +++ V+  T G+G+SG MKRHNF G  A+HG S  HR HGS G R+ PGRV
Sbjct: 91  KILKVSFNTKGRGYSGVMKRHNFAGGPASHG-SRFHRRHGSIGNREWPGRV 140


>gi|328725484|ref|XP_003248496.1| PREDICTED: 50S ribosomal protein L4-like [Acyrthosiphon pisum]
          Length = 267

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/49 (57%), Positives = 34/49 (69%), Gaps = 1/49 (2%)

Query: 135 THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +HG S  HR  GS G   D  +VFK K++ GRMGGN VT++NLEVV VD
Sbjct: 2   SHG-SRYHRGSGSMGMASDASKVFKGKELPGRMGGNTVTMQNLEVVKVD 49


>gi|18313001|ref|NP_559668.1| 50S ribosomal protein L3P [Pyrobaculum aerophilum str. IM2]
 gi|42559672|sp|Q8ZW52|RL3_PYRAE RecName: Full=50S ribosomal protein L3P
 gi|18160502|gb|AAL63850.1| ribosomal protein L3 [Pyrobaculum aerophilum str. IM2]
          Length = 338

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 67/148 (45%), Gaps = 23/148 (15%)

Query: 94  VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G   SP   FT GQLVDV  +T GKG+ G +KR     L   H     HR  G+ G  Q
Sbjct: 185 LGKTVSPKDVFTPGQLVDVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIGP-Q 243

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCV 195
            P  +F   +  G+MG ++ T  N  ++ + +                 K   IL++G V
Sbjct: 244 APAVMFTQPR-PGQMGFHQRTEYNKRLLKIGENGAEITPKSGFPHYGVVKGPYILIQGSV 302

Query: 196 PGAKKNSWIL---VRDSFKSAVNCKGKV 220
           PGA+K   +L   VR   K+    + +V
Sbjct: 303 PGARKRLVVLRHPVRPPRKAPPAAEPQV 330


>gi|198462074|ref|XP_001352331.2| GA20958 [Drosophila pseudoobscura pseudoobscura]
 gi|198139691|gb|EAL29374.2| GA20958 [Drosophila pseudoobscura pseudoobscura]
          Length = 233

 Score = 52.0 bits (123), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 1/85 (1%)

Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
           +++  GF G +KRH + G+ A+HGV+ +HR  G+ G   + GRV+   KM G MG     
Sbjct: 93  VSVDHGFQGVVKRHGYKGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKMPGHMGNRWRV 152

Query: 174 VKNLEVVSVDDKRGLILVKG-CVPG 197
           +K L +   + K  ++ V+G  VPG
Sbjct: 153 LKGLRIWRTNAKYNVMWVQGSSVPG 177


>gi|305662572|ref|YP_003858860.1| LSU ribosomal protein L3P [Ignisphaera aggregans DSM 17230]
 gi|304377141|gb|ADM26980.1| LSU ribosomal protein L3P [Ignisphaera aggregans DSM 17230]
          Length = 340

 Score = 51.6 bits (122), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 53/111 (47%), Gaps = 9/111 (8%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGS--TGCRQDPGRVFKN 160
           F VGQ +D+ G+T GKGF G +KR     L   H     HR  GS   G R         
Sbjct: 197 FNVGQFIDIIGVTKGKGFQGVIKRFGVKELPRWH----KHRK-GSRRIGSRSPTIGAMSE 251

Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDS 209
              AG+MG +R T  N  ++++ DK   I   G  P  G  K+ WI+V+ S
Sbjct: 252 TPQAGQMGFHRRTEYNKRILAMGDKGEEITPSGGFPHYGIVKSMWIMVQGS 302


>gi|145628333|ref|ZP_01784134.1| 50S ribosomal protein L4 [Haemophilus influenzae 22.1-21]
 gi|145640871|ref|ZP_01796453.1| 50S ribosomal protein L3 [Haemophilus influenzae R3021]
 gi|144980108|gb|EDJ89767.1| 50S ribosomal protein L4 [Haemophilus influenzae 22.1-21]
 gi|145274385|gb|EDK14249.1| 50S ribosomal protein L3 [Haemophilus influenzae 22.4-21]
          Length = 49

 Score = 51.6 bits (122), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 1/50 (2%)

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           MAG +G  RVTV++LEVV VD +R L+LVKG VPGA  N  ++V+ + K+
Sbjct: 1   MAGHLGAERVTVQSLEVVRVDAERKLLLVKGSVPGA-INGDVIVKPAVKA 49


>gi|195175671|ref|XP_002028552.1| GL21036 [Drosophila persimilis]
 gi|194104882|gb|EDW26925.1| GL21036 [Drosophila persimilis]
          Length = 712

 Score = 51.2 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 1/84 (1%)

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           ++  GF G +KRH + G+ A+HGV+ +HR  G+ G   + GRV+   KM G MG     +
Sbjct: 503 SVDHGFQGVVKRHGYMGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKMPGHMGNRWRVL 562

Query: 175 KNLEVVSVDDKRGLILVKG-CVPG 197
           K L +     K  ++ V+G  VPG
Sbjct: 563 KGLRIWRTKAKYNVMWVQGSSVPG 586


>gi|145592242|ref|YP_001154244.1| 50S ribosomal protein L3P [Pyrobaculum arsenaticum DSM 13514]
 gi|212288408|sp|A4WMH5|RL3_PYRAR RecName: Full=50S ribosomal protein L3P
 gi|145284010|gb|ABP51592.1| LSU ribosomal protein L3P [Pyrobaculum arsenaticum DSM 13514]
          Length = 338

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 5/123 (4%)

Query: 94  VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G   SP   F+ GQLVDV  +T GKG+ G +KR     L   H     HR  G+ G  Q
Sbjct: 185 LGKTVSPKDVFSPGQLVDVIAVTKGKGWQGVVKRFGVTILPRWHKHRKGHRRTGTIGP-Q 243

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDSF 210
            P  +F   +  G+MG ++ T  N  ++ + +    I  K   P  G  K  +IL++ S 
Sbjct: 244 APALMFTQPR-PGQMGFHQRTEYNKRLLKIGENGAEITPKSGFPHYGVIKGPYILIQGSL 302

Query: 211 KSA 213
             A
Sbjct: 303 PGA 305


>gi|284162460|ref|YP_003401083.1| ribosomal protein L3 [Archaeoglobus profundus DSM 5631]
 gi|284012457|gb|ADB58410.1| ribosomal protein L3 [Archaeoglobus profundus DSM 5631]
          Length = 332

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 19/128 (14%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G  +DV  +T GKGF G +KR     L A H  S  HR  G+ G    P RV     
Sbjct: 187 FQEGAFIDVIAITKGKGFQGPVKRWGVITLDAKHARSSKHRRVGTLGP-WTPHRVRWTVP 245

Query: 163 MAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCVPGAKKNSWIL 205
            AG+MG ++ T  N  ++ + +                 +   +LV G VPG  K   I 
Sbjct: 246 QAGQMGFHQRTEYNKRIIKIGENGEEITPEGGFVHYGVIRSDYVLVSGSVPGPVKRL-IR 304

Query: 206 VRDSFKSA 213
           +RD+ +  
Sbjct: 305 MRDAIRPP 312


>gi|115675312|ref|XP_001202265.1| PREDICTED: similar to Mitochondrial ribosomal protein L3, partial
           [Strongylocentrotus purpuratus]
 gi|115711825|ref|XP_780771.2| PREDICTED: similar to Mitochondrial ribosomal protein L3, partial
           [Strongylocentrotus purpuratus]
          Length = 98

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 1/76 (1%)

Query: 68  FFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRH 127
            F SV +  K+ +  F V  +  L P G+    ++F  G  VD+   TI KGF G MKR 
Sbjct: 8   LFKSVCLPVKEHITSFNVTDNAALQP-GTPLYAAHFRPGMYVDIAAKTIDKGFQGVMKRW 66

Query: 128 NFGGLRATHGVSISHR 143
              G  A+HG + +HR
Sbjct: 67  GMKGQPASHGATKTHR 82


>gi|115641910|ref|XP_001204299.1| PREDICTED: similar to Mitochondrial 39S ribosomal protein L3 (L3mt)
           (MRP-L3), partial [Strongylocentrotus purpuratus]
 gi|115660375|ref|XP_001200456.1| PREDICTED: similar to Mitochondrial 39S ribosomal protein L3 (L3mt)
           (MRP-L3), partial [Strongylocentrotus purpuratus]
          Length = 83

 Score = 49.3 bits (116), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 40/68 (58%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           ++F  G  VD+   TI KGF G MKR    G  A+HG + +HR  G +G   DPGR++  
Sbjct: 6   AHFRPGMYVDIAAKTIDKGFQGVMKRWGMKGQPASHGATKTHRKMGGSGGGGDPGRIWPG 65

Query: 161 KKMAGRMG 168
           KKM G MG
Sbjct: 66  KKMPGFMG 73


>gi|11499509|ref|NP_070750.1| 50S ribosomal protein L3P [Archaeoglobus fulgidus DSM 4304]
 gi|3914742|sp|O28354|RL3_ARCFU RecName: Full=50S ribosomal protein L3P
 gi|2648621|gb|AAB89331.1| LSU ribosomal protein L3P (rpl3P) [Archaeoglobus fulgidus DSM 4304]
          Length = 331

 Score = 48.1 bits (113), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 103/280 (36%), Gaps = 77/280 (27%)

Query: 3   SGVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGY------ 46
            G    K GMT V  I+ R+          +PVTV+     +V   R   K  Y      
Sbjct: 38  QGFAGYKAGMTHVVMIDDRKNSPTYGEEVVVPVTVIETPPMKVAAVRVYKKTQYGMQIAA 97

Query: 47  ----------------------------MAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKK 78
                                        AV+ GA E +V   ++P     + V   PKK
Sbjct: 98  EVWSNNLDDFLDRRLNLPKKEPDVEKLKAAVENGASEVRVVTYTQPY--LITGV---PKK 152

Query: 79  --KLFEFRV------QKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNF 129
              + E R+        D  +  +G   S S  F  G ++DV  +T GKGF G +KR   
Sbjct: 153 VPDVMEHRIGGNVEEALDYAISKLGKEISVSEVFDEGAIIDVIAVTKGKGFQGPVKRWGV 212

Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD----- 184
             L A H  S  HR  G+ G   +P  V      AG+MG ++ T  N  ++ + +     
Sbjct: 213 ITLDAKHARSSKHRRVGNLGP-WNPHHVRWTVPQAGQMGFHQRTEYNKRLIKIGENGEEI 271

Query: 185 ------------KRGLILVKGCVPGAKKNSWILVRDSFKS 212
                       +   +LV G VPG  K   I +RD+ + 
Sbjct: 272 TPKGGFLHYGVIRTQYVLVTGSVPGPVKRL-IRMRDAIRP 310


>gi|327311641|ref|YP_004338538.1| 50S ribosomal protein L3P [Thermoproteus uzoniensis 768-20]
 gi|326948120|gb|AEA13226.1| 50S ribosomal protein L3P [Thermoproteus uzoniensis 768-20]
          Length = 337

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 2/94 (2%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F+ GQLVDV  +T GKG+ G +KR     L   H     HR  G+ G  Q P  +F   +
Sbjct: 196 FSAGQLVDVLAITRGKGWQGVIKRFGVKILPRWHKHRKGHRRTGTIGP-QSPALMFTQPR 254

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP 196
             G+MG ++ T  N  ++ + +    I  KG  P
Sbjct: 255 -PGQMGFHQRTEYNKRILKIGNNPAEINPKGGWP 287


>gi|14600545|ref|NP_147062.1| 50S ribosomal protein L3P [Aeropyrum pernix K1]
 gi|6685859|sp|Q9YFM2|RL3_AERPE RecName: Full=50S ribosomal protein L3P
 gi|5103618|dbj|BAA79139.1| 50S ribosomal protein L3P [Aeropyrum pernix K1]
          Length = 344

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 63/154 (40%), Gaps = 35/154 (22%)

Query: 74  VSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLR 133
           VS   KLF++      +L+ V  VF       GQLVDV  +T GKGF G +KR     L 
Sbjct: 173 VSDVTKLFDYAKDVLGNLIAVNDVFE-----EGQLVDVIAVTKGKGFQGVIKRWGVKELP 227

Query: 134 ATH-----GVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD---- 184
             H        I  RSHG +   + P         AG+ G +R T  N  ++ +DD    
Sbjct: 228 RWHKHRKGSRRIGARSHGRSTFWETP--------QAGQTGFHRRTEYNKRILMIDDDGYK 279

Query: 185 -------------KRGLILVKGCVPGAKKNSWIL 205
                        +   +++ G +PG  K   ++
Sbjct: 280 VTPAGGFLRYGVVRSTFVMLSGSIPGTPKRPIVM 313


>gi|302774326|ref|XP_002970580.1| hypothetical protein SELMODRAFT_411279 [Selaginella moellendorffii]
 gi|300162096|gb|EFJ28710.1| hypothetical protein SELMODRAFT_411279 [Selaginella moellendorffii]
          Length = 115

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 6/58 (10%)

Query: 5   VVARKLGMTC------VYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEA 56
           ++AR+ G+ C      V++  GRRIP+TVL  D+ QVV  +T+D   + A+QVG  +A
Sbjct: 57  LMARRTGVKCGMTSTAVWDKWGRRIPITVLWADDNQVVQVKTVDHETFKALQVGCAQA 114


>gi|288931510|ref|YP_003435570.1| ribosomal protein L3 [Ferroglobus placidus DSM 10642]
 gi|288893758|gb|ADC65295.1| ribosomal protein L3 [Ferroglobus placidus DSM 10642]
          Length = 329

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 19/128 (14%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G  +DV  +T GKGF G +KR     L A H  S  HR  G+ G    P RV     
Sbjct: 184 FKEGAFIDVLSITKGKGFQGPVKRWGVITLDAKHARSSKHRRVGTLGPWH-PHRVRWTVP 242

Query: 163 MAGRMGGNRVTVKNLEVVSV----DD-------------KRGLILVKGCVPGAKKNSWIL 205
            AG+MG ++ T  N  ++ +    +D             +   +LV G VPG+ K   + 
Sbjct: 243 QAGQMGFHQRTEYNKRILKIGTNGEDINPEGGFLHYGLVRSDYVLVSGSVPGSVKRL-VR 301

Query: 206 VRDSFKSA 213
           +RD+ +  
Sbjct: 302 MRDAIRPP 309


>gi|313233372|emb|CBY24487.1| unnamed protein product [Oikopleura dioica]
          Length = 303

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 7/114 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVV----VHRTLDKNGYMAVQVGAGEAK 57
           R+G+V +K+G+  ++  +G R+  T+L + NC V+     H    + G + V  G G+  
Sbjct: 165 RTGMVMKKIGVEPMWLRDGTRVVSTILQVQNCHVIKYFPKHEFNGRTGAVIVGAGTGKPF 224

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDV 111
           +KN +     +     ++PK  L  F + ++  L P G+     +F VGQ VDV
Sbjct: 225 LKNEN--YTQYCLDAGLTPKAHLARFPITENARLQP-GTPLHVQHFHVGQYVDV 275


>gi|124484910|ref|YP_001029526.1| 50S ribosomal protein L3P [Methanocorpusculum labreanum Z]
 gi|212288407|sp|A2SPK3|RL3_METLZ RecName: Full=50S ribosomal protein L3P
 gi|124362451|gb|ABN06259.1| LSU ribosomal protein L3P [Methanocorpusculum labreanum Z]
          Length = 333

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 18/117 (15%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S  + GQ  D+TG+T GKGF GA+KR      +  H  +   R  G+ G    P  V   
Sbjct: 187 SLLSEGQFADITGITKGKGFQGAVKRFGITLRKRKHARTKKERHIGTLGP-WTPHHVRWQ 245

Query: 161 KKMAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCVPGAKK 200
             M G+MG  + T  N  ++ + +                 +   +L+KG +PG  K
Sbjct: 246 VPMPGQMGFQQRTEFNKRIIKIGENADEINPAGGFLHYGLVRNNYVLIKGSIPGPAK 302


>gi|291533622|emb|CBL06735.1| hypothetical protein MHY_20500 [Megamonas hypermegale ART12/1]
          Length = 60

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 37/59 (62%)

Query: 1  MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
          M   ++ +KLGMT ++  EG+ +PVTV+      V+  +T++ +GY AVQ+G G  K K
Sbjct: 1  MAKVILGKKLGMTQIFTEEGKVVPVTVVESGKNVVLQSKTVETDGYNAVQIGFGTVKEK 59


>gi|327400872|ref|YP_004341711.1| 50S ribosomal protein L3 [Archaeoglobus veneficus SNP6]
 gi|327316380|gb|AEA46996.1| ribosomal protein L3 [Archaeoglobus veneficus SNP6]
          Length = 329

 Score = 45.8 bits (107), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 3/114 (2%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           ++ G ++DV  +T GKGF G +KR     L A H  S  HR  G  G   +P  +     
Sbjct: 184 YSEGAIIDVLSITKGKGFQGPVKRWGVITLDAKHARSSKHRRVGCLGP-WNPHHIRWTVP 242

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDSFKSAV 214
            AG+MG ++ T  N  ++ + +    +   G  P  G  ++ ++L+  S   +V
Sbjct: 243 QAGQMGFHQRTEFNKRIIKIGEDGSEVTPNGGFPHYGVVRSDYVLISGSVPGSV 296


>gi|325958531|ref|YP_004289997.1| 50S ribosomal protein L3 [Methanobacterium sp. AL-21]
 gi|325329963|gb|ADZ09025.1| ribosomal protein L3 [Methanobacterium sp. AL-21]
          Length = 337

 Score = 45.8 bits (107), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 26/125 (20%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGV---SISHRSHGSTGCRQDPGRVFK 159
           F+ G+ VD   +T GKGF G +KR    G+R  +G    S   R  GS G    P R   
Sbjct: 190 FSDGEHVDTIAVTKGKGFQGPVKRF---GVRIQYGKAARSSKARHVGSIGP-WTPARTMW 245

Query: 160 NKKMAGRMGGNRVTVKNLEVVSVDD-------------------KRGLILVKGCVPGAKK 200
              MAG+MG ++ T  N +++ + D                   K G +++KG +PG  K
Sbjct: 246 TVAMAGQMGYHKRTEFNKKILRIADESQVDEVNPKGGFVKYGLIKNGYVMIKGSIPGPSK 305

Query: 201 NSWIL 205
              IL
Sbjct: 306 RLVIL 310


>gi|159040903|ref|YP_001540155.1| 50S ribosomal protein L3P [Caldivirga maquilingensis IC-167]
 gi|212288253|sp|A8MB75|RL3_CALMQ RecName: Full=50S ribosomal protein L3P
 gi|157919738|gb|ABW01165.1| ribosomal protein L3 [Caldivirga maquilingensis IC-167]
          Length = 347

 Score = 45.4 bits (106), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 20/115 (17%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  GQLVDV G+T GKG  G +KR     L   H      R  G+ G +  P  ++   +
Sbjct: 199 FKPGQLVDVIGVTKGKGTQGVIKRFGVKELPRWHKHRKGSRRTGTVGPK--PAVMYTQPR 256

Query: 163 MAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCVPGAKK 200
           M G+MG +R T  N  ++ + D                 + G +L++G  PG  K
Sbjct: 257 M-GQMGFHRRTEYNKRILKISDNGSEITPKGGFKHYGIVRSGYMLIEGSTPGVVK 310


>gi|29027489|gb|AAO61962.1| ribosomal protein L3 [Aster yellows phytoplasma]
          Length = 81

 Score = 45.4 bits (106), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 36/60 (60%)

Query: 1  MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
          + SG++ + +GMT +Y+  G  +P +++    C V+  +T +K+GY + Q+G  E K  N
Sbjct: 2  IMSGIIGKNIGMTSIYDESGFNVPCSIIEAGPCIVLQIKTKEKDGYNSCQLGFDEKKNTN 61


>gi|149928577|ref|ZP_01916799.1| ribosomal protein L3 [Limnobacter sp. MED105]
 gi|149822702|gb|EDM81967.1| ribosomal protein L3 [Limnobacter sp. MED105]
          Length = 60

 Score = 45.1 bits (105), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 36/57 (63%)

Query: 1  MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57
          M  G++ RK+GM  ++   G  IPVTV+ + + +V   +TL+++GY AVQ+  G  +
Sbjct: 1  MSLGLIGRKIGMMRIFTDAGVSIPVTVVDVSSNRVAQLKTLEQDGYTAVQLAYGSKR 57


>gi|146302876|ref|YP_001190192.1| 50S ribosomal protein L3P [Metallosphaera sedula DSM 5348]
 gi|172046889|sp|A4YCW6|RL3_METS5 RecName: Full=50S ribosomal protein L3P
 gi|145701126|gb|ABP94268.1| LSU ribosomal protein L3P [Metallosphaera sedula DSM 5348]
          Length = 341

 Score = 45.1 bits (105), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 7/110 (6%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNK 161
           F  GQL+D+ G+T G GF G +KR+    L   H      R  G+ G     P  V    
Sbjct: 199 FKEGQLMDIIGVTKGHGFQGVIKRYGVQELPRWHKHRKGSRKVGTKGPSLGTPSYV---- 254

Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--PGAKKNSWILVRDS 209
              G+MG +R T  N  ++ + D   LI  KG     G  KN+++LV+ S
Sbjct: 255 PQPGQMGFHRRTEYNKRILKISDDTKLINPKGGFVRYGLVKNTYLLVQGS 304


>gi|159463060|ref|XP_001689760.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158283748|gb|EDP09498.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 264

 Score = 45.1 bits (105), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 16/84 (19%)

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           +G +G +KR +      THG S SHR HGS G    P RV+   KMAG+           
Sbjct: 114 RGPAGTIKRWHHKRGAMTHG-SKSHREHGSIGSATTPSRVYPGLKMAGQ----------- 161

Query: 178 EVVSVDDKRGLILVKGCVPGAKKN 201
               VD +R  ++VKG VPG   N
Sbjct: 162 ----VDTERRALVVKGSVPGKVGN 181


>gi|304314253|ref|YP_003849400.1| 50S ribosomal protein L3P [Methanothermobacter marburgensis str.
           Marburg]
 gi|302587712|gb|ADL58087.1| 50S ribosomal protein L3P [Methanothermobacter marburgensis str.
           Marburg]
          Length = 337

 Score = 45.1 bits (105), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 27/133 (20%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGV---SISHRSHGSTGCRQDPGRVFK 159
           F+ G  VD   +T GKGF G +KR    G+R  +G    S   R  GS G    P R   
Sbjct: 190 FSEGAFVDAIAVTKGKGFQGPVKRW---GIRIQYGKAARSSKGRHIGSLGP-WTPSRTMW 245

Query: 160 NKKMAGRMGGNRVTVKNLEVVSVDD--------------KRGL-----ILVKGCVPGAKK 200
               AG+MG +R T  N +++ + D              + GL     ++VKG VPG  K
Sbjct: 246 TVPQAGQMGYHRRTEYNKQILKIGDASEADQVNPSGGFVRYGLVRNDYVMVKGSVPGPTK 305

Query: 201 NSWILVRDSFKSA 213
              +++R + ++A
Sbjct: 306 R-LVVLRKAIRAA 317


>gi|261884192|ref|ZP_06008231.1| 50S ribosomal protein L3 [Campylobacter fetus subsp. venerealis
           str. Azul-94]
          Length = 153

 Score = 44.7 bits (104), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 1/62 (1%)

Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166
           +++ V+  T G+GF G +KRH F    A+HG S  HR  GS G  + PGRV   +KMAG 
Sbjct: 92  KVLKVSFNTKGRGFQGVIKRHGFLCGPASHG-SRFHRRPGSIGNCEWPGRVQPGRKMAGH 150

Query: 167 MG 168
            G
Sbjct: 151 YG 152


>gi|303244465|ref|ZP_07330800.1| ribosomal protein L3 [Methanothermococcus okinawensis IH1]
 gi|302485163|gb|EFL48092.1| ribosomal protein L3 [Methanothermococcus okinawensis IH1]
          Length = 333

 Score = 44.7 bits (104), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 57/115 (49%), Gaps = 11/115 (9%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRH----NFGGLRATHGVSISHRSHGSTGCRQDPGRVF 158
           FT G+ +D   +T GKGF G +KR      FG  R   GV    R  GS G    P RV 
Sbjct: 188 FTDGEFIDTIAITKGKGFQGPVKRWGIKIQFGKHR-NKGVG---RHTGSIGP-WTPKRVM 242

Query: 159 KNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--PGAKKNSWILVRDSFK 211
               MAG+MG ++ T  N  ++ + +    I+ KG     G  KN+++LV+ S +
Sbjct: 243 WTVPMAGQMGYHQRTEYNKRILKIGNNGEEIVPKGGFLHYGDVKNNYVLVKGSVQ 297


>gi|15678033|ref|NP_275147.1| 50S ribosomal protein L3P [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|3122720|sp|O26110|RL3_METTH RecName: Full=50S ribosomal protein L3P
 gi|2621048|gb|AAB84521.1| ribosomal protein L3 (E.coli ) [Methanothermobacter
           thermautotrophicus str. Delta H]
          Length = 337

 Score = 44.7 bits (104), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 27/133 (20%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGV---SISHRSHGSTGCRQDPGRVFK 159
           F+ G  VD   +T GKGF G +KR    G+R  +G    S   R  GS G    P R   
Sbjct: 190 FSEGAFVDAIAVTKGKGFQGPVKRW---GIRIQYGKAARSSKGRHIGSLGP-WTPSRTMW 245

Query: 160 NKKMAGRMGGNRVTVKNLEVVSVDD--------------KRGL-----ILVKGCVPGAKK 200
               AG+MG +R T  N +++ + D              + GL     +++KG VPG  K
Sbjct: 246 TVPQAGQMGYHRRTEYNKQILKIGDASEADLVNPDGGFVRYGLVRNDYVMIKGSVPGPTK 305

Query: 201 NSWILVRDSFKSA 213
              +++R + ++A
Sbjct: 306 R-LVVLRKAIRAA 317


>gi|167945157|ref|ZP_02532231.1| Ribosomal protein L3 [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 61

 Score = 44.3 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/54 (42%), Positives = 34/54 (62%)

Query: 1  MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG 54
          M  GV+ RK+GMT V+  EG  +PVTV+ +   +V   ++ D +GY A+QV  G
Sbjct: 1  MAIGVIGRKIGMTRVFTEEGASVPVTVIEVAPNRVSQLKSEDTDGYRAIQVTTG 54


>gi|330835825|ref|YP_004410553.1| 50S ribosomal protein L3P [Metallosphaera cuprina Ar-4]
 gi|329567964|gb|AEB96069.1| 50S ribosomal protein L3P [Metallosphaera cuprina Ar-4]
          Length = 341

 Score = 43.9 bits (102), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 7/110 (6%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNK 161
           F  GQL+D+ G+T G GF G +KR+    L   H      R  G+ G     P  V    
Sbjct: 199 FNEGQLIDILGVTTGYGFQGVIKRYGVQELPRWHKHRKGSRKVGTKGPSLGTPSYV---- 254

Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--PGAKKNSWILVRDS 209
              G+MG +R T  N  ++ + D+   I  KG     G  +N+++LV+ S
Sbjct: 255 PQPGQMGYHRRTEYNKRILRISDEINQINPKGGFVRYGLVRNTYLLVQGS 304


>gi|288560108|ref|YP_003423594.1| ribosomal protein L3P Rpl3p [Methanobrevibacter ruminantium M1]
 gi|288542818|gb|ADC46702.1| ribosomal protein L3P Rpl3p [Methanobrevibacter ruminantium M1]
          Length = 336

 Score = 43.9 bits (102), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 53/125 (42%), Gaps = 26/125 (20%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISH---RSHGSTGCRQDPGRVFK 159
           F+ GQ VD    T GKG  G +KR N   +R  +G ++     R  GS G    P R   
Sbjct: 189 FSEGQYVDAIATTKGKGVQGVVKRWN---IRIQYGKAMRSGKGRHVGSIGP-WSPERTMW 244

Query: 160 NKKMAGRMGGNRVTVKNLEVVSVDD-------------------KRGLILVKGCVPGAKK 200
               AG+MG ++ T  N +V+ + D                   K   +LVKG VPG  K
Sbjct: 245 TVAQAGQMGYHKRTEFNKKVIKIGDVSEVDAVNPAGGFIRYGLVKNDYVLVKGSVPGPTK 304

Query: 201 NSWIL 205
              IL
Sbjct: 305 RLVIL 309


>gi|20089942|ref|NP_616017.1| 50S ribosomal protein L3P [Methanosarcina acetivorans C2A]
 gi|42559661|sp|Q8TRU7|RL3_METAC RecName: Full=50S ribosomal protein L3P
 gi|19914903|gb|AAM04497.1| ribosomal protein L3p [Methanosarcina acetivorans C2A]
          Length = 337

 Score = 43.5 bits (101), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 55/127 (43%), Gaps = 19/127 (14%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G LVD   +TIGKG  G +KR     ++  H    S R  G+ G   +P RV     
Sbjct: 193 FKNGTLVDTAAITIGKGTQGPVKRWGIQLMKGKHSRQGSLRQVGTLGAF-NPSRVSWRVP 251

Query: 163 MAGRMGGNRVTVKNLEVVSVDDK----------------RG-LILVKGCVPGAKKNSWIL 205
             G+MG ++ T  N  ++ +                   RG  IL+KG VPG  K   I 
Sbjct: 252 QMGQMGYHQRTEFNKRILKIGSDGEEVTPEGGFINYGLVRGDYILIKGSVPGPSKR-LIR 310

Query: 206 VRDSFKS 212
           +RD  ++
Sbjct: 311 LRDPIRA 317


>gi|301500876|ref|YP_003795288.1| ribosomal protein L3 [Chromera velia]
 gi|300069422|gb|ADJ66530.1| ribosomal protein L3 [Chromera velia]
          Length = 193

 Score = 43.5 bits (101), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 5/85 (5%)

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR--MGGNRVTVK 175
           KGF G + R+ F     THG S  H + GS G    PGRV   KK+ GR  +      + 
Sbjct: 105 KGFLGVVARYKFTKGPKTHGSS-HHAAPGSIGAGTSPGRVLPGKKLPGRRPLAKRNYMIN 163

Query: 176 NLEVVSVDDKRGLILVKGCVPGAKK 200
              ++SV   +  + V G +PG +K
Sbjct: 164 TYRLLSVQQNK--VEVPGTLPGRRK 186


>gi|150401236|ref|YP_001325002.1| 50S ribosomal protein L3P [Methanococcus aeolicus Nankai-3]
 gi|166233154|sp|A6UV68|RL3_META3 RecName: Full=50S ribosomal protein L3P
 gi|150013939|gb|ABR56390.1| ribosomal protein L3 [Methanococcus aeolicus Nankai-3]
          Length = 333

 Score = 43.1 bits (100), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 3/111 (2%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           FT G+ +D   +T GKGF G +KR         H      R  GS G    P R+     
Sbjct: 188 FTGGEFIDTVAITKGKGFQGPVKRWGIKIQFGKHQNKGVGRHTGSIGP-WTPKRIMWTVP 246

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--PGAKKNSWILVRDSFK 211
           MAG++G ++ T  N  ++ + +    I+ KG     G  KN+++LV+ S +
Sbjct: 247 MAGQVGFHQRTEYNKRILKIGENGSEIVPKGGFLNYGVVKNNYVLVKGSVQ 297


>gi|307595041|ref|YP_003901358.1| 50S ribosomal protein L3 [Vulcanisaeta distributa DSM 14429]
 gi|307550242|gb|ADN50307.1| ribosomal protein L3 [Vulcanisaeta distributa DSM 14429]
          Length = 342

 Score = 43.1 bits (100), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F+ GQ VDV  +T GKG+ G +KR N   L   H     +R  G+ G  Q+P   F   +
Sbjct: 196 FSEGQYVDVAAITKGKGWQGVVKRFNVKILPKWHKHRKGYRRIGAIGP-QNPALTFTTPR 254

Query: 163 MAGRMGGNRVTVKNLEVVSV 182
             G+MG ++ T  N  ++ +
Sbjct: 255 -PGQMGLHKRTEYNKRILRI 273


>gi|148642822|ref|YP_001273335.1| 50S ribosomal protein L3P [Methanobrevibacter smithii ATCC 35061]
 gi|222445053|ref|ZP_03607568.1| hypothetical protein METSMIALI_00670 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350378|ref|ZP_05975795.1| ribosomal protein L3 [Methanobrevibacter smithii DSM 2374]
 gi|166233159|sp|A5UL89|RL3_METS3 RecName: Full=50S ribosomal protein L3P
 gi|148551839|gb|ABQ86967.1| ribosomal protein L3p [Methanobrevibacter smithii ATCC 35061]
 gi|222434618|gb|EEE41783.1| hypothetical protein METSMIALI_00670 [Methanobrevibacter smithii
           DSM 2375]
 gi|288861161|gb|EFC93459.1| ribosomal protein L3 [Methanobrevibacter smithii DSM 2374]
          Length = 336

 Score = 43.1 bits (100), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 53/122 (43%), Gaps = 26/122 (21%)

Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISH---RSHGSTGCRQDPGRVFKNKK 162
           GQ VD    T GKGF G +KR    G+R  +G ++     R  GS G    P R      
Sbjct: 192 GQFVDAIATTKGKGFQGVVKRW---GIRIQYGKAVRAGKGRHVGSIGP-WTPSRTMWTVA 247

Query: 163 MAGRMGGNRVTVKN---LEVVSVDD----------------KRGLILVKGCVPGAKKNSW 203
            AG+MG ++ T  N   L++ S D+                K   +LVKG +PG  K   
Sbjct: 248 QAGQMGYHKRTEFNKKILKIASADEVDQINPDGGFVKYGLVKNDYVLVKGSLPGPSKRLV 307

Query: 204 IL 205
           IL
Sbjct: 308 IL 309


>gi|15920641|ref|NP_376310.1| 50S ribosomal protein L3P [Sulfolobus tokodaii str. 7]
 gi|42559677|sp|Q975I1|RL3_SULTO RecName: Full=50S ribosomal protein L3P
 gi|15621424|dbj|BAB65419.1| 343aa long hypothetical 50S ribosomal protein L3 [Sulfolobus
           tokodaii str. 7]
          Length = 343

 Score = 43.1 bits (100), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 7/114 (6%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR-QDPGRVFKNK 161
           F  GQL+D+ G+T GKGF G +KR+    L   H      R  G+ G     P  V    
Sbjct: 201 FKEGQLIDIIGVTKGKGFQGVVKRYGVVELPRWHKHRKGSRKVGARGPSFSTPSYV---- 256

Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--PGAKKNSWILVRDSFKSA 213
              G+MG +R T  N  ++ + D    I  KG     G  +N+++++  S   A
Sbjct: 257 PQPGQMGYHRRTEYNKRILKISDDPNEINPKGGFVNYGIVRNTYLIIEGSIIGA 310


>gi|1644227|dbj|BAA11007.1| ribosomal protein L3 [Bacillus subtilis]
          Length = 60

 Score = 43.1 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 35/59 (59%)

Query: 1  MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
          M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+Q+G  + + K
Sbjct: 1  MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQLGFDDKREK 59


>gi|296109263|ref|YP_003616212.1| ribosomal protein L3 [Methanocaldococcus infernus ME]
 gi|295434077|gb|ADG13248.1| ribosomal protein L3 [Methanocaldococcus infernus ME]
          Length = 333

 Score = 42.7 bits (99), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 21/120 (17%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH---------GSTGCRQD 153
           F  G+LVD  G+T GKGF G +KR          GV I  R H         GS G  Q 
Sbjct: 188 FQEGELVDTIGVTKGKGFQGVVKR---------WGVKIQPRKHRRQGVGRHVGSIGPWQ- 237

Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDSFK 211
           P  +       G+MG ++ T  N  ++ + +    I  +G  P  G  KN++++++ S +
Sbjct: 238 PKMIMWTVPRPGQMGYHQRTEYNKRILKIGNNGEEITPEGGFPHYGVIKNNYVILKGSVQ 297


>gi|119719148|ref|YP_919643.1| 50S ribosomal protein L3P [Thermofilum pendens Hrk 5]
 gi|119524268|gb|ABL77640.1| LSU ribosomal protein L3P [Thermofilum pendens Hrk 5]
          Length = 334

 Score = 42.7 bits (99), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 21/118 (17%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G  +DV  +T GKGF G++KR     +   H     H   GS G  Q P  +F    
Sbjct: 188 FKEGDYIDVIAVTKGKGFQGSVKRFGVEEMPRWHKHRKGHSRIGSVGP-QKPAIMFYT-P 245

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGL-------------------ILVKGCVPGAKKN 201
             G++G ++ T  N  ++ V D   L                   I+V+G VPGA K 
Sbjct: 246 FPGQLGFHQRTEYNKRILKVGDAESLKEINPPGGWPHYGLVRSQFIIVEGSVPGAVKR 303


>gi|255513436|gb|EET89702.1| ribosomal protein L3 [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 322

 Score = 42.7 bits (99), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 29/153 (18%)

Query: 68  FFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKR 126
           + S+V     ++ F+F  Q       VG    P+  F  G+ +DV  +T GKG++G +KR
Sbjct: 151 YESTVTGGNAEQRFDFAAQL------VGKEVKPADVFKGGEFIDVVSVTKGKGWAGVIKR 204

Query: 127 HNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV------ 180
           H  G  R  H  +   R  G+ G    PG++       G++G N  T  N  ++      
Sbjct: 205 H--GVRRLDHKATQKIRHIGALGAFT-PGKIMYTVPRPGQLGFNYRTEHNKRILVLGAAS 261

Query: 181 ---SVDDKRGL----------ILVKGCVPGAKK 200
               V+ K G+          IL++G VPG  K
Sbjct: 262 DTEKVNIKSGIKNYGLVKSDYILIEGSVPGPAK 294


>gi|312137075|ref|YP_004004412.1| lsu ribosomal protein l3p [Methanothermus fervidus DSM 2088]
 gi|311224794|gb|ADP77650.1| LSU ribosomal protein L3P [Methanothermus fervidus DSM 2088]
          Length = 333

 Score = 42.4 bits (98), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 54/131 (41%), Gaps = 21/131 (16%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F+ G+ VD   +T GKGF G +KR       A    S   R  GS G    P R      
Sbjct: 190 FSEGEYVDTIAVTKGKGFQGPVKRWGIKIQNAKTARSGKGRHIGSLGP-WTPSRTMWRVP 248

Query: 163 MAGRMGGNRVTVKNL---------EVVSVDDKRGLI----------LVKGCVPGAKKNSW 203
            AG+ G +R T  N          EV  ++ K G I          LVKG VPG  K   
Sbjct: 249 QAGQTGYHRRTEYNKMIMKIGTSDEVEKINPKGGFIRYGLVRNDYLLVKGSVPGPTKR-L 307

Query: 204 ILVRDSFKSAV 214
           I++R + +  V
Sbjct: 308 IMLRKAIRPKV 318


>gi|302348734|ref|YP_003816372.1| 50S ribosomal protein L3P [Acidilobus saccharovorans 345-15]
 gi|302329146|gb|ADL19341.1| 50S ribosomal protein L3P [Acidilobus saccharovorans 345-15]
          Length = 329

 Score = 42.4 bits (98), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 58/145 (40%), Gaps = 35/145 (24%)

Query: 78  KKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATH- 136
           K  F++        L VG VF P     G +VDV  +T GKGF G +KR     L   H 
Sbjct: 162 KAAFDYATSILGKTLSVGEVFQP-----GLMVDVIAVTKGKGFQGDVKRFGVKVLPRWHK 216

Query: 137 ----GVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD-------- 184
                  I  RSHG     + P          G++G +R T  N  ++ + D        
Sbjct: 217 HRKKARGIGARSHGKGTWWEIPN--------PGQLGFHRRTEYNKRILDITDDWAAYTPA 268

Query: 185 ---------KRGLILVKGCVPGAKK 200
                    +  L++++G +PGA K
Sbjct: 269 GGFLHYGIPRSTLVVLEGTIPGAVK 293


>gi|229584895|ref|YP_002843397.1| 50S ribosomal protein L3P [Sulfolobus islandicus M.16.27]
 gi|259709736|sp|C3N5S7|RL3_SULIA RecName: Full=50S ribosomal protein L3P
 gi|228019945|gb|ACP55352.1| ribosomal protein L3 [Sulfolobus islandicus M.16.27]
          Length = 351

 Score = 42.4 bits (98), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 5/109 (4%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  GQL+DV G+T GKGF+G +KR++   L   H      R  G+ G             
Sbjct: 209 FKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGPSLG---TPSYTP 265

Query: 163 MAGRMGGNRVTVKNLEVVSV-DDKRGLILVKGCV-PGAKKNSWILVRDS 209
             G++G +R T  N  ++ + DD + +    G V  G  +N++IL+  S
Sbjct: 266 QPGQLGFHRRTEYNKRIIKIGDDPKEINPAGGFVRYGIVRNTYILLEGS 314


>gi|227827691|ref|YP_002829471.1| 50S ribosomal protein L3P [Sulfolobus islandicus M.14.25]
 gi|238619862|ref|YP_002914688.1| 50S ribosomal protein L3P [Sulfolobus islandicus M.16.4]
 gi|259709737|sp|C4KHF6|RL3_SULIK RecName: Full=50S ribosomal protein L3P
 gi|259709739|sp|C3MVH8|RL3_SULIM RecName: Full=50S ribosomal protein L3P
 gi|227459487|gb|ACP38173.1| ribosomal protein L3 [Sulfolobus islandicus M.14.25]
 gi|238380932|gb|ACR42020.1| ribosomal protein L3 [Sulfolobus islandicus M.16.4]
 gi|323474749|gb|ADX85355.1| ribosomal protein L3 [Sulfolobus islandicus REY15A]
 gi|323477477|gb|ADX82715.1| ribosomal protein L3 [Sulfolobus islandicus HVE10/4]
          Length = 351

 Score = 42.4 bits (98), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 5/109 (4%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  GQL+DV G+T GKGF+G +KR++   L   H      R  G+ G             
Sbjct: 209 FKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGPSLG---TPSYTP 265

Query: 163 MAGRMGGNRVTVKNLEVVSV-DDKRGLILVKGCV-PGAKKNSWILVRDS 209
             G++G +R T  N  ++ + DD + +    G V  G  +N++IL+  S
Sbjct: 266 QPGQLGFHRRTEYNKRIIKIGDDPKEINPAGGFVRYGIVRNTYILLEGS 314


>gi|325969277|ref|YP_004245469.1| 50S ribosomal protein L3P [Vulcanisaeta moutnovskia 768-28]
 gi|323708480|gb|ADY01967.1| 50S ribosomal protein L3P [Vulcanisaeta moutnovskia 768-28]
          Length = 342

 Score = 42.4 bits (98), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  GQ VDV  +T GKG  G +KR N   L   H     +R  G+ G  Q+P   F   +
Sbjct: 196 FNEGQYVDVAAITKGKGLQGVVKRFNVKILPKWHKHRKGYRRIGAIGP-QNPALAFTTPR 254

Query: 163 MAGRMGGNRVTVKNLEVVSV 182
             G+MG ++ T  N  ++ +
Sbjct: 255 -PGQMGLHKRTEYNKRILKI 273


>gi|227830387|ref|YP_002832167.1| 50S ribosomal protein L3P [Sulfolobus islandicus L.S.2.15]
 gi|229579206|ref|YP_002837604.1| 50S ribosomal protein L3P [Sulfolobus islandicus Y.G.57.14]
 gi|229582042|ref|YP_002840441.1| 50S ribosomal protein L3P [Sulfolobus islandicus Y.N.15.51]
 gi|284997894|ref|YP_003419661.1| ribosomal protein L3 [Sulfolobus islandicus L.D.8.5]
 gi|259709738|sp|C3MQ59|RL3_SULIL RecName: Full=50S ribosomal protein L3P
 gi|259709740|sp|C3NHA9|RL3_SULIN RecName: Full=50S ribosomal protein L3P
 gi|259709741|sp|C3NEE3|RL3_SULIY RecName: Full=50S ribosomal protein L3P
 gi|227456835|gb|ACP35522.1| ribosomal protein L3 [Sulfolobus islandicus L.S.2.15]
 gi|228009920|gb|ACP45682.1| ribosomal protein L3 [Sulfolobus islandicus Y.G.57.14]
 gi|228012758|gb|ACP48519.1| ribosomal protein L3 [Sulfolobus islandicus Y.N.15.51]
 gi|284445789|gb|ADB87291.1| ribosomal protein L3 [Sulfolobus islandicus L.D.8.5]
          Length = 351

 Score = 42.4 bits (98), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 5/110 (4%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  GQL+DV G+T GKGF+G +KR++   L   H      R  G+ G             
Sbjct: 209 FKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGPSLG---TPSYTP 265

Query: 163 MAGRMGGNRVTVKNLEVVSV-DDKRGLILVKGCV-PGAKKNSWILVRDSF 210
             G++G +R T  N  ++ + DD + +    G V  G  +N++IL+  S 
Sbjct: 266 QPGQLGFHRRTEYNKRIIKIGDDPKEINPAGGFVRYGIVRNTYILLEGSI 315


>gi|282164890|ref|YP_003357275.1| 50S ribosomal protein L3P [Methanocella paludicola SANAE]
 gi|282157204|dbj|BAI62292.1| 50S ribosomal protein L3P [Methanocella paludicola SANAE]
          Length = 341

 Score = 42.4 bits (98), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 19/122 (15%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ--------DP 154
           F  G+LVDV+ +T GKG  G +KR          G++I  R H  TG ++        +P
Sbjct: 192 FVPGELVDVSAITKGKGTQGPVKR---------WGIAIQKRKHARTGKKRHVGNLGPWNP 242

Query: 155 GRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKG--CVPGAKKNSWILVRDSFKS 212
            RV       G+ G ++ T  N  ++ + +K   +  +G     G  +N +I+V+ S   
Sbjct: 243 HRVRWQVPQLGQTGYHQRTEYNKRIIKLGEKAEEVTPEGGFLHYGVLRNPYIVVKGSIPG 302

Query: 213 AV 214
            V
Sbjct: 303 PV 304


>gi|170291100|ref|YP_001737916.1| 50S ribosomal protein L3P [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170175180|gb|ACB08233.1| ribosomal protein L3 [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 332

 Score = 42.4 bits (98), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 24/133 (18%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F VGQLVDVT +T G G+ G ++R     LR  H         GS G R  P   ++ 
Sbjct: 184 SVFKVGQLVDVTAVTKGHGWQGVVRRFGIELLR--HKAGKGRWRVGSLGSRHPPYVTWRV 241

Query: 161 KKMAGRMGGNRVTVKNLEVVSVDD--------------------KRGLILVKGCVPGAKK 200
            + AG+ G ++ T  N  ++ + D                    +   IL+ G VPG  K
Sbjct: 242 PR-AGQTGYHKRTEYNKRILMMGDLTKGDLDLSPKGGFKNYGILRSQYILLSGSVPGPAK 300

Query: 201 NSWILVRDSFKSA 213
             ++ +R   + +
Sbjct: 301 R-FVFIRHPIRPS 312


>gi|298674802|ref|YP_003726552.1| 50S ribosomal protein L3 [Methanohalobium evestigatum Z-7303]
 gi|298287790|gb|ADI73756.1| ribosomal protein L3 [Methanohalobium evestigatum Z-7303]
          Length = 337

 Score = 42.0 bits (97), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 24/156 (15%)

Query: 78  KKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHG 137
           K+ FE+        + +  VF+P     G +VD+  +T GKG  G +KR      +  H 
Sbjct: 173 KEKFEYAKSILGTKISITDVFNP-----GGIVDIAAITTGKGTQGPVKRWGIQIAKHKHN 227

Query: 138 VSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK------------ 185
            + S R  G+ G    P  +       G+MG ++ T  N  ++ V ++            
Sbjct: 228 RAGSARQVGTLGPWH-PAHISWRVPQMGQMGYHQRTEYNKRIIKVSNEGSEINPDGGFLN 286

Query: 186 ----RG-LILVKGCVPGAKKNSWILVRDSFKSAVNC 216
               RG  +L+KG VPG  K   +  RD  +S V+ 
Sbjct: 287 YGLVRGNYVLIKGSVPGPSKR-LVRFRDPIRSKVSS 321


>gi|91772083|ref|YP_564775.1| 50S ribosomal protein L3P [Methanococcoides burtonii DSM 6242]
 gi|121689445|sp|Q12ZV1|RL3_METBU RecName: Full=50S ribosomal protein L3P
 gi|91711098|gb|ABE51025.1| LSU ribosomal protein L3P [Methanococcoides burtonii DSM 6242]
          Length = 337

 Score = 42.0 bits (97), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 19/134 (14%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G++VDV  +T G G  G +KR     ++  H    S R  G+ G    P  V     
Sbjct: 193 FDNGKIVDVAAITTGHGTQGPVKRWGINLMKNKHSRQGSLRQVGTLGP-WTPAHVSWRVP 251

Query: 163 MAGRMGGNRVTVKNLEVV----SVDD-------------KRGLILVKGCVPGAKKNSWIL 205
            AG+MG ++ T  N  ++     VD+             +   IL+KG VPG  K   I 
Sbjct: 252 QAGQMGYHQRTDYNKRILKMSSDVDEVNPAGGFVNYGLVRGNYILIKGSVPGPSKR-LIR 310

Query: 206 VRDSFKSAVNCKGK 219
           +R+  +S V+  G+
Sbjct: 311 LREPTRSKVSSIGE 324


>gi|20093853|ref|NP_613700.1| 50S ribosomal protein L3P [Methanopyrus kandleri AV19]
 gi|42559662|sp|Q8TY90|RL3_METKA RecName: Full=50S ribosomal protein L3P
 gi|19886782|gb|AAM01630.1| Ribosomal protein L3 [Methanopyrus kandleri AV19]
          Length = 361

 Score = 42.0 bits (97), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 60/140 (42%), Gaps = 37/140 (26%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH---------GSTGCRQD 153
           F  G++VDV+ +T GKGF G +KR          GV+I  R           GS G    
Sbjct: 196 FDEGEIVDVSAITKGKGFQGVVKR---------WGVTIQDRKTQRKQKGRHIGSIGP-IT 245

Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD------KRG-----------LILVKGCVP 196
           P RV     MAG++G ++ T  N  ++ + +       RG            I++ G VP
Sbjct: 246 PSRVRWTVPMAGQVGYHQRTEHNKRILKIGEDGEEVTPRGGFVNYGVVRGDYIMIHGTVP 305

Query: 197 GAKKNSWILVRDSFKSAVNC 216
           G KK   I VR + +   N 
Sbjct: 306 GPKKRL-IRVRPAVRPPKNA 324


>gi|297619637|ref|YP_003707742.1| ribosomal protein L3 [Methanococcus voltae A3]
 gi|297378614|gb|ADI36769.1| ribosomal protein L3 [Methanococcus voltae A3]
          Length = 333

 Score = 41.6 bits (96), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 19/130 (14%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G+++D   +T GKGF G++KR         H      R  GS G  + P RV  +  
Sbjct: 188 FEAGEIIDTVAVTKGKGFQGSVKRWGIKIQFGKHQRKGVGRHTGSIGPWR-PRRVMWSVP 246

Query: 163 MAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCVPGAKKNSWIL 205
           + G+MG ++ T  N  +  +                   K G +LVKG V G  K   ++
Sbjct: 247 LPGQMGFHQRTEYNKRIFKIGAEGTEVTPKGGFLNYGVLKNGYVLVKGTVQGPAKRL-VM 305

Query: 206 VRDSFKSAVN 215
           +R + ++ V+
Sbjct: 306 IRGAIRAPVD 315


>gi|124028157|ref|YP_001013477.1| 50S ribosomal protein L3P [Hyperthermus butylicus DSM 5456]
 gi|123978851|gb|ABM81132.1| 50S ribosomal protein L3P [Hyperthermus butylicus DSM 5456]
          Length = 319

 Score = 40.8 bits (94), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 48/127 (37%), Gaps = 32/127 (25%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGR------ 156
           F  GQ VDV  +T GKGF G +KR     L   H     HR     G R  PG       
Sbjct: 174 FREGQFVDVIAVTKGKGFQGVIKRFGVKELPRWH----KHRK----GSRSGPGTRGPATS 225

Query: 157 -VFKNKKMAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCVPGA 198
             +      G+MG +R T  N  ++ + D                 +   IL+ G +PG 
Sbjct: 226 FSWSEVPQPGQMGFHRRTEYNKRILKIGDNGLEITPAGGFLHYGIVRSTYILLAGSIPGT 285

Query: 199 KKNSWIL 205
            K   +L
Sbjct: 286 PKRPIVL 292


>gi|150399607|ref|YP_001323374.1| 50S ribosomal protein L3P [Methanococcus vannielii SB]
 gi|9910844|sp|Q9UWG2|RL3_METVA RecName: Full=50S ribosomal protein L3P
 gi|166233160|sp|A6UQJ0|RL3_METVS RecName: Full=50S ribosomal protein L3P
 gi|150012310|gb|ABR54762.1| ribosomal protein L3 [Methanococcus vannielii SB]
          Length = 334

 Score = 40.8 bits (94), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 3/111 (2%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G+ +D   +T GKGF G +KR         H      R  GS G  + P RV     
Sbjct: 189 FETGEFIDTLAVTKGKGFQGPVKRWGVKIQFGKHQRKGVGRQTGSIGPWR-PKRVMWTVP 247

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--PGAKKNSWILVRDSFK 211
           +AG+MG ++ T  N  ++ +  +   I  KG     GA KN +++V+ + +
Sbjct: 248 LAGQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGAVKNGYVVVKGTVQ 298


>gi|15897623|ref|NP_342228.1| 50S ribosomal protein L3P [Sulfolobus solfataricus P2]
 gi|284174948|ref|ZP_06388917.1| 50S ribosomal protein L3P [Sulfolobus solfataricus 98/2]
 gi|9910845|sp|Q9UXA8|RL3_SULSO RecName: Full=50S ribosomal protein L3P
 gi|6015757|emb|CAB57584.1| ribosomal protein L3 (HMAL3) [Sulfolobus solfataricus P2]
 gi|13813888|gb|AAK41018.1| LSU ribosomal protein L3AB (rpl3AB) [Sulfolobus solfataricus P2]
 gi|261602391|gb|ACX91994.1| ribosomal protein L3 [Sulfolobus solfataricus 98/2]
          Length = 351

 Score = 40.8 bits (94), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 21/128 (16%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  GQL+DV G+T GKGF+G +KR++   L   H      R  G+ G             
Sbjct: 209 FKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGPSLG---TPSYTP 265

Query: 163 MAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCVPGAKKNSWIL 205
             G++G +R T  N  ++ + D                 +   +L++G + G+KK   I 
Sbjct: 266 QPGQLGFHRRTEYNKRIIKIGDEPKEINPAGGFVRYGIVRNTYVLLEGSILGSKKRP-IF 324

Query: 206 VRDSFKSA 213
           +R+  + +
Sbjct: 325 LREPVRPS 332


>gi|293372119|ref|ZP_06618510.1| 50S ribosomal protein L3 domain protein [Bacteroides ovatus SD
          CMC 3f]
 gi|292632911|gb|EFF51498.1| 50S ribosomal protein L3 domain protein [Bacteroides ovatus SD
          CMC 3f]
          Length = 53

 Score = 40.8 bits (94), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 30/46 (65%)

Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57
          MT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G  + K
Sbjct: 1  MTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKK 46


>gi|15668348|ref|NP_247144.1| 50S ribosomal protein L3P [Methanocaldococcus jannaschii DSM 2661]
 gi|1710558|sp|P54014|RL3_METJA RecName: Full=50S ribosomal protein L3P
 gi|1590928|gb|AAB98161.1| LSU ribosomal protein L3P (rplC) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 335

 Score = 40.8 bits (94), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 1/91 (1%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G+LVD  G+T GKGF G +KR         H      R  GS G  Q P  V  +  
Sbjct: 190 FQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQ-PKMVMWSVP 248

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKG 193
           M G+MG ++ T  N  ++ + +    I  KG
Sbjct: 249 MPGQMGYHQRTEYNKRILKIGNNGDEITPKG 279


>gi|118389862|ref|XP_001027976.1| ribosomal protein L3 containing protein [Tetrahymena thermophila]
 gi|3861468|emb|CAA10068.1| ribosomal protein L3 [Tetrahymena thermophila]
 gi|89309746|gb|EAS07734.1| ribosomal protein L3 containing protein [Tetrahymena thermophila
           SB210]
          Length = 391

 Score = 40.4 bits (93), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 55/137 (40%), Gaps = 37/137 (27%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVF 158
           S F   +++DV G+T GKGF+G +KR  FG     H    +HR +   GC     P R+ 
Sbjct: 205 SIFAENEMLDVLGVTKGKGFAGVIKR--FG---VKHLQKKTHRGYRKVGCIGAWHPSRIR 259

Query: 159 KNKKMAGRMGGNRVTVKNLEVVSV---DD---------------------------KRGL 188
                AG++G +  T  N +V  V   DD                           K   
Sbjct: 260 FTVPRAGQLGYHHRTETNKKVYRVGKGDDASNASTAGDVTDKAITPLGGFPHYGVVKNDF 319

Query: 189 ILVKGCVPGAKKNSWIL 205
           I++KGC  G KK    L
Sbjct: 320 IMIKGCCVGPKKRVLTL 336


>gi|289191591|ref|YP_003457532.1| ribosomal protein L3 [Methanocaldococcus sp. FS406-22]
 gi|288938041|gb|ADC68796.1| ribosomal protein L3 [Methanocaldococcus sp. FS406-22]
          Length = 335

 Score = 40.4 bits (93), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 1/91 (1%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G+LVD  G+T GKGF G +KR         H      R  GS G  Q P  V  +  
Sbjct: 190 FQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQ-PKMVMWSVP 248

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKG 193
           M G+MG ++ T  N  ++ + +    I  KG
Sbjct: 249 MPGQMGYHQRTEYNKRILKIGNNGDEITPKG 279


>gi|14520558|ref|NP_126033.1| 50S ribosomal protein L3P [Pyrococcus abyssi GE5]
 gi|9910846|sp|Q9V1T5|RL3_PYRAB RecName: Full=50S ribosomal protein L3P
 gi|5457774|emb|CAB49264.1| rpl3P LSU ribosomal protein L3P [Pyrococcus abyssi GE5]
          Length = 361

 Score = 40.4 bits (93), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 3/85 (3%)

Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
           G+L+DV  +T GKG  G +KR     LRA H  S   R  GS G    P RV     MAG
Sbjct: 213 GELLDVIAVTKGKGTQGPVKRWGI-KLRA-HKDSKGRRKVGSIGP-WHPARVMWTVPMAG 269

Query: 166 RMGGNRVTVKNLEVVSVDDKRGLIL 190
           +MG +  T  N  ++++ +   L++
Sbjct: 270 QMGFHHRTELNKRLIAIGENGKLVI 294


>gi|332158024|ref|YP_004423303.1| 50S ribosomal protein L3P [Pyrococcus sp. NA2]
 gi|331033487|gb|AEC51299.1| 50S ribosomal protein L3P [Pyrococcus sp. NA2]
          Length = 362

 Score = 40.4 bits (93), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 3/85 (3%)

Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
           G+L+DV  +T GKG  G +KR     LRA H  S   R  GS G    P RV     MAG
Sbjct: 214 GELLDVIAVTKGKGTQGPVKRWGI-KLRA-HKDSKGRRKVGSIGP-WHPARVMWTVPMAG 270

Query: 166 RMGGNRVTVKNLEVVSVDDKRGLIL 190
           +MG +  T  N  ++++ +   L++
Sbjct: 271 QMGFHHRTELNKRLIAIGENGKLVI 295


>gi|256810689|ref|YP_003128058.1| ribosomal protein L3 [Methanocaldococcus fervens AG86]
 gi|256793889|gb|ACV24558.1| ribosomal protein L3 [Methanocaldococcus fervens AG86]
          Length = 335

 Score = 40.4 bits (93), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 3/111 (2%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G+LVD  G+T GKGF G +KR         H      R  GS G  Q P  V     
Sbjct: 190 FQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQ-PKMVMWTVP 248

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--PGAKKNSWILVRDSFK 211
           M G+MG ++ T  N  ++ + +    I  KG     G  +N++++++ S +
Sbjct: 249 MPGQMGYHQRTEYNKRILKIGNNGEEITPKGGFLHYGVIRNNYVVLKGSVQ 299


>gi|14591535|ref|NP_143617.1| 50S ribosomal protein L3P [Pyrococcus horikoshii OT3]
 gi|6094075|sp|O59418|RL3_PYRHO RecName: Full=50S ribosomal protein L3P
 gi|3258212|dbj|BAA30895.1| 362aa long hypothetical 50S ribosomal protein L3 [Pyrococcus
           horikoshii OT3]
          Length = 362

 Score = 40.4 bits (93), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 3/85 (3%)

Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
           G+L+DV  +T GKG  G +KR     LRA H  S   R  GS G    P RV     MAG
Sbjct: 214 GELLDVIAVTKGKGTQGPVKRWGI-KLRA-HKDSKGRRKVGSIGP-WHPARVMWTVPMAG 270

Query: 166 RMGGNRVTVKNLEVVSVDDKRGLIL 190
           +MG +  T  N  ++++ +   L++
Sbjct: 271 QMGFHHRTELNKRLIAIGENGKLVI 295


>gi|159905511|ref|YP_001549173.1| 50S ribosomal protein L3P [Methanococcus maripaludis C6]
 gi|226730533|sp|A9A9B8|RL3_METM6 RecName: Full=50S ribosomal protein L3P
 gi|159887004|gb|ABX01941.1| ribosomal protein L3 [Methanococcus maripaludis C6]
          Length = 334

 Score = 40.0 bits (92), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 3/111 (2%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G+++D   +T GKGF G++KR         H      R  GS G  + P RV     
Sbjct: 189 FEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGPWR-PRRVMWTVP 247

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--PGAKKNSWILVRDSFK 211
           + G+MG ++ T  N  ++ +  +   I  KG     GA KN +++V+ + +
Sbjct: 248 LPGQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGAVKNGYVVVKGTVQ 298


>gi|134045079|ref|YP_001096565.1| 50S ribosomal protein L3P [Methanococcus maripaludis C5]
 gi|166233156|sp|A4FVY2|RL3_METM5 RecName: Full=50S ribosomal protein L3P
 gi|132662704|gb|ABO34350.1| LSU ribosomal protein L3P [Methanococcus maripaludis C5]
          Length = 334

 Score = 40.0 bits (92), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 3/111 (2%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G+++D   +T GKGF G++KR         H      R  GS G  + P RV     
Sbjct: 189 FEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGPWR-PRRVMWTVP 247

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--PGAKKNSWILVRDSFK 211
           + G+MG ++ T  N  ++ +  +   I  KG     GA KN +++V+ + +
Sbjct: 248 LPGQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGAVKNGYVVVKGTVQ 298


>gi|150402715|ref|YP_001330009.1| 50S ribosomal protein L3P [Methanococcus maripaludis C7]
 gi|166233157|sp|A6VHD2|RL3_METM7 RecName: Full=50S ribosomal protein L3P
 gi|150033745|gb|ABR65858.1| ribosomal protein L3 [Methanococcus maripaludis C7]
          Length = 334

 Score = 40.0 bits (92), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 3/111 (2%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G+++D   +T GKGF G++KR         H      R  GS G  + P RV     
Sbjct: 189 FEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGPWR-PRRVMWTVP 247

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--PGAKKNSWILVRDSFK 211
           + G+MG ++ T  N  ++ +  +   I  KG     GA KN +++V+ + +
Sbjct: 248 LPGQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGAVKNGYVVVKGTVQ 298


>gi|45359106|ref|NP_988663.1| 50S ribosomal protein L3P [Methanococcus maripaludis S2]
 gi|74553576|sp|Q6LX10|RL3_METMP RecName: Full=50S ribosomal protein L3P
 gi|45047981|emb|CAF31099.1| LSU Ribosomal protein L3P [Methanococcus maripaludis S2]
          Length = 334

 Score = 40.0 bits (92), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 3/111 (2%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G+++D   +T GKGF G++KR         H      R  GS G  + P RV     
Sbjct: 189 FEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGPWR-PRRVMWTVP 247

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--PGAKKNSWILVRDSFK 211
           + G+MG ++ T  N  ++ +  +   I  KG     GA KN +++V+ + +
Sbjct: 248 LPGQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGAVKNGYVVVKGTVQ 298


>gi|88603499|ref|YP_503677.1| 50S ribosomal protein L3P [Methanospirillum hungatei JF-1]
 gi|109893522|sp|Q2FU91|RL3_METHJ RecName: Full=50S ribosomal protein L3P
 gi|88188961|gb|ABD41958.1| LSU ribosomal protein L3P [Methanospirillum hungatei JF-1]
          Length = 337

 Score = 40.0 bits (92), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 48/117 (41%), Gaps = 18/117 (15%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F VGQ  DVT +T GKG  G +KR      +  H      R  G+ G    P  V   
Sbjct: 191 SLFKVGQYTDVTAITKGKGTQGPVKRWGVHLRKRKHSRGKKERHVGTLGP-WTPHHVRWQ 249

Query: 161 KKMAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCVPGAKK 200
             M G+MG ++ T  N  ++ + +                 +   +L+KG VPG  K
Sbjct: 250 VPMMGQMGYHQRTEFNKRLLKIGEDGAEITPEGGFINYGEVRARYVLIKGSVPGPSK 306


>gi|18978197|ref|NP_579554.1| 50S ribosomal protein L3P [Pyrococcus furiosus DSM 3638]
 gi|42559663|sp|Q8TZZ8|RL3_PYRFU RecName: Full=50S ribosomal protein L3P
 gi|18894006|gb|AAL81949.1| LSU ribosomal protein L3P [Pyrococcus furiosus DSM 3638]
          Length = 365

 Score = 39.7 bits (91), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 3/79 (3%)

Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
           G+L+DV  +T GKG  G +KR     LRA H  S   R  GS G    P RV     MAG
Sbjct: 216 GELLDVIAVTKGKGTQGPVKRWGI-KLRA-HKDSKGRRKVGSIGP-WHPARVMWTVPMAG 272

Query: 166 RMGGNRVTVKNLEVVSVDD 184
           +MG +  T  N  ++++ +
Sbjct: 273 QMGFHHRTELNKRLIAIGE 291


>gi|261403779|ref|YP_003248003.1| ribosomal protein L3 [Methanocaldococcus vulcanius M7]
 gi|261370772|gb|ACX73521.1| ribosomal protein L3 [Methanocaldococcus vulcanius M7]
          Length = 335

 Score = 39.7 bits (91), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 3/111 (2%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G+L D  G+T GKGF G +KR         H      R  GS G  Q P  +     
Sbjct: 190 FQEGELADTIGITKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQ-PKMIMWTVP 248

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--PGAKKNSWILVRDSFK 211
           M G+MG ++ T  N  ++ + +    I  KG     G  KN++++++ S +
Sbjct: 249 MPGQMGYHQRTEYNKRILKIGNNGEEITPKGGFLHYGVIKNNYVVLKGSVQ 299


>gi|322372168|ref|ZP_08046709.1| 50S ribosomal protein L3P [Haladaptatus paucihalophilus DX253]
 gi|320548177|gb|EFW89850.1| 50S ribosomal protein L3P [Haladaptatus paucihalophilus DX253]
          Length = 338

 Score = 39.7 bits (91), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 22/128 (17%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G+ +D +G+T GKG  G +KR      +  H      R  G+ G   +P RV     
Sbjct: 195 FRAGEYLDTSGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 253

Query: 163 MAGRMGGNRVTVKNLEVVSV-DDKRGLI---------------LVKGCVPGAKKNSWILV 206
             G+ G ++ T  N  ++S+ DD    +               L+KG VPG  K    LV
Sbjct: 254 QLGQTGYHQRTELNKRLISLGDDDEASVDGGFVNYGEVDGPYALIKGSVPGPNKR---LV 310

Query: 207 RDSFKSAV 214
           R  F+ AV
Sbjct: 311 R--FRPAV 316


>gi|21228226|ref|NP_634148.1| 50S ribosomal protein L3P [Methanosarcina mazei Go1]
 gi|42559655|sp|Q8PV50|RL3_METMA RecName: Full=50S ribosomal protein L3P
 gi|20906682|gb|AAM31820.1| LSU ribosomal protein L3P [Methanosarcina mazei Go1]
          Length = 337

 Score = 39.3 bits (90), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 19/127 (14%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G +VD   +TIGKG  G +KR      +  H    S R  G+ G   +P RV     
Sbjct: 193 FKNGTVVDTAAITIGKGTQGPVKRWGIQLQKGKHSRQGSLRQIGTLGSF-NPSRVSWRVP 251

Query: 163 MAGRMGGNRVTVKNLEVVSVDDK----------------RG-LILVKGCVPGAKKNSWIL 205
             G+MG ++ T  N  ++ +                   RG  +L+KG VPG  K   I 
Sbjct: 252 QMGQMGYHQRTEFNKRILKIGSDGEEVTPEGGFINYGLVRGDYVLIKGSVPGPSKR-LIR 310

Query: 206 VRDSFKS 212
           +RD  ++
Sbjct: 311 LRDPIRA 317


>gi|76803057|ref|YP_331152.1| 50S ribosomal protein L3P [Natronomonas pharaonis DSM 2160]
 gi|109893528|sp|Q3IMY8|RL3_NATPD RecName: Full=50S ribosomal protein L3P
 gi|76558922|emb|CAI50518.1| ribosomal protein L3 [Natronomonas pharaonis DSM 2160]
          Length = 336

 Score = 39.3 bits (90), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 53/127 (41%), Gaps = 21/127 (16%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G+  DV G+T GKG  G +KR      +  H      R  G+ G   +P RV     
Sbjct: 194 FRAGEYTDVAGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 252

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKR-----GLI----------LVKGCVPGAKKNSWILVR 207
             G+ G ++ T  N  ++ + D       G +          LVKG VPG  K    LVR
Sbjct: 253 QQGQTGYHQRTELNKRLIDLGDDDVSPDGGFVNYGEVDGPYALVKGSVPGPDKR---LVR 309

Query: 208 DSFKSAV 214
             F+ AV
Sbjct: 310 --FRPAV 314


>gi|16082270|ref|NP_394728.1| 50S ribosomal protein L3P [Thermoplasma acidophilum DSM 1728]
 gi|42559694|sp|Q9HIQ9|RL3_THEAC RecName: Full=50S ribosomal protein L3P
 gi|10640617|emb|CAC12395.1| 50S ribosomal protein L3 related protein [Thermoplasma acidophilum]
          Length = 331

 Score = 38.9 bits (89), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 23/128 (17%)

Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
           G+ VDV  +T GKGF+G +KR    G++     +  HR    T     P  V      AG
Sbjct: 189 GKFVDVVSITKGKGFTGHVKRF---GVKLLPRKNRKHRRMIGTLGPWHPDWVRNTVPQAG 245

Query: 166 RMGGNRVTVKNLEVVSVDDK--------RG-----------LILVKGCVPGAKKNSWILV 206
           +MG  + T+ N+ V+   +K        RG            +L+ G +PGA K   I +
Sbjct: 246 QMGFQQRTISNVRVIKYGNKEEVDSINVRGGFLHYGFVKNDYVLLFGSIPGASKR-LIKM 304

Query: 207 RDSFKSAV 214
           RD  +  V
Sbjct: 305 RDPARQKV 312


>gi|307564672|ref|ZP_07627202.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
           ligase [Prevotella amnii CRIS 21A-A]
 gi|307346600|gb|EFN91907.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
           ligase [Prevotella amnii CRIS 21A-A]
          Length = 485

 Score = 38.9 bits (89), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 7/97 (7%)

Query: 121 SGAMKRHNFGGLRATHGVSIS-HRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           S A+ +H  GGL  T G+  +  R H       D  + F+N + A +M  + +  K   +
Sbjct: 181 SHAIHQHRIGGLYFTGGIFTNLTRDH------LDYHKTFENYRNAKKMFFDSLPKKAFAI 234

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            + DDK G+I+V+ C    K  S   + D     + C
Sbjct: 235 TNADDKNGMIMVQNCKANIKTYSIQRMADFRARIIEC 271


>gi|70606412|ref|YP_255282.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius DSM 639]
 gi|76363364|sp|Q4JB40|RL3_SULAC RecName: Full=50S ribosomal protein L3P
 gi|68567060|gb|AAY79989.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius DSM 639]
          Length = 342

 Score = 38.9 bits (89), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 7/110 (6%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR-QDPGRVFKNK 161
           F  GQL D+ G+T GKGF G +KR++       H      R  G+ G     P  V    
Sbjct: 200 FREGQLTDIIGVTKGKGFQGVIKRYSVVEFPRWHKHRKGSRKIGARGPSISTPSYV---- 255

Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--PGAKKNSWILVRDS 209
              G++G +R T  N  ++ + D    I   G +   G  KN+++++  S
Sbjct: 256 PQPGQLGFHRRTEYNKRIIKIGDNVNEINPAGGIVNYGLVKNTYLVIEGS 305


>gi|218884488|ref|YP_002428870.1| 50S ribosomal protein L3P [Desulfurococcus kamchatkensis 1221n]
 gi|218766104|gb|ACL11503.1| 50S ribosomal protein L3P [Desulfurococcus kamchatkensis 1221n]
          Length = 396

 Score = 38.5 bits (88), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 39/89 (43%), Gaps = 5/89 (5%)

Query: 95  GSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP 154
           G V +   F  GQ VDV G+T GKGF G +KR     L   H     HR        + P
Sbjct: 243 GYVRASDVFMEGQFVDVIGVTKGKGFQGVVKRFGVKELPRWH----KHRKGSRKIGARSP 298

Query: 155 GR-VFKNKKMAGRMGGNRVTVKNLEVVSV 182
           G         AG+MG +R T  N  ++ +
Sbjct: 299 GFGTMSEPPQAGQMGFHRRTEYNKRILKM 327


>gi|320101368|ref|YP_004176960.1| 50S ribosomal protein L3P [Desulfurococcus mucosus DSM 2162]
 gi|319753720|gb|ADV65478.1| LSU ribosomal protein L3P [Desulfurococcus mucosus DSM 2162]
          Length = 396

 Score = 38.5 bits (88), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 5/89 (5%)

Query: 95  GSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP 154
           G V +   F  GQ +DV G+T GKGF G +KR     L   H     HR        + P
Sbjct: 243 GYVKAADVFMEGQFIDVIGVTKGKGFQGVVKRFGVKELPRWH----KHRKGSRKIGARSP 298

Query: 155 GR-VFKNKKMAGRMGGNRVTVKNLEVVSV 182
           G         AG+MG +R T  N  ++ +
Sbjct: 299 GFGTMSEPPQAGQMGFHRRTEYNKRILRI 327


>gi|289579898|ref|YP_003478364.1| ribosomal protein L3 [Natrialba magadii ATCC 43099]
 gi|289529451|gb|ADD03802.1| ribosomal protein L3 [Natrialba magadii ATCC 43099]
          Length = 340

 Score = 38.5 bits (88), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 22/128 (17%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G+ VD +G+T GKG  G +KR      +  H      R  G+ G   +P RV     
Sbjct: 197 FRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 255

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGL----------------ILVKGCVPGAKKNSWILV 206
             G+ G ++ T  N  +V + D                    +L+KG +PG  K    LV
Sbjct: 256 QQGQTGYHQRTELNKRLVDIGDGADATVDGGFVNYGEVDGPHVLIKGSLPGPNKR---LV 312

Query: 207 RDSFKSAV 214
           R  F+ A+
Sbjct: 313 R--FRPAI 318


>gi|291333648|gb|ADD93339.1| ribosomal protein L3 [uncultured archaeon MedDCM-OCT-S11-C441]
          Length = 348

 Score = 38.5 bits (88), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 3/82 (3%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           + VGQ VDV G+T GKG+ G++KR  FG    +H  S   R  G+ G     G V K  +
Sbjct: 205 YDVGQEVDVVGVTKGKGWQGSIKR--FGLKLLSHKNSKRRRQGGNMGDFGT-GYVRKTIR 261

Query: 163 MAGRMGGNRVTVKNLEVVSVDD 184
            AG++G ++ T  N +++ + +
Sbjct: 262 QAGQVGYHKRTELNKKILRISN 283


>gi|15790632|ref|NP_280456.1| 50S ribosomal protein L3P [Halobacterium sp. NRC-1]
 gi|169236371|ref|YP_001689571.1| 50S ribosomal protein L3P [Halobacterium salinarum R1]
 gi|42559695|sp|Q9HPD4|RL3_HALSA RecName: Full=50S ribosomal protein L3P
 gi|226725182|sp|B0R656|RL3_HALS3 RecName: Full=50S ribosomal protein L3P
 gi|10581159|gb|AAG19936.1| 50S ribosomal protein L13P [Halobacterium sp. NRC-1]
 gi|167727437|emb|CAP14225.1| ribosomal protein L3 [Halobacterium salinarum R1]
          Length = 335

 Score = 38.1 bits (87), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 52/128 (40%), Gaps = 22/128 (17%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G+  D  G+T GKG  G +KR      +  H      R  G+ G   +P RV     
Sbjct: 192 FRAGEFTDAAGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 250

Query: 163 MAGRMGGNRVTVKNLEVVSVDD----------------KRGLILVKGCVPGAKKNSWILV 206
             G+ G ++ T  N  ++ ++D                     LVKG VPG ++    LV
Sbjct: 251 QQGQTGYHQRTELNKRLIDINDGDEPTPDGGFPNYGEVDGPYTLVKGSVPGPEQR---LV 307

Query: 207 RDSFKSAV 214
           R  F+ AV
Sbjct: 308 R--FRPAV 313


>gi|84489708|ref|YP_447940.1| 50S ribosomal protein L3P [Methanosphaera stadtmanae DSM 3091]
 gi|109893523|sp|Q2NFV6|RL3_METST RecName: Full=50S ribosomal protein L3P
 gi|84373027|gb|ABC57297.1| 50S ribosomal protein L3P [Methanosphaera stadtmanae DSM 3091]
          Length = 337

 Score = 38.1 bits (87), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 50/125 (40%), Gaps = 26/125 (20%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSIS---HRSHGSTGCRQDPGRVFK 159
           F  G+  D    T GKG  G +KR    G+R  +G +      R  GS G    P R   
Sbjct: 190 FQEGEYTDAIATTKGKGVQGPVKRF---GVRIQYGKAARSGIERHVGSIGP-WTPNRTMW 245

Query: 160 NKKMAGRMGGNRVTVKNLEVVSVDD-------------------KRGLILVKGCVPGAKK 200
              M G+MG ++ T  N +++ + D                   K   ILVKG +PG  K
Sbjct: 246 TVAMQGQMGYHKRTEYNKKLLKIGDESEVDLINPDGGFVKYGFVKNNYILVKGSLPGPSK 305

Query: 201 NSWIL 205
              +L
Sbjct: 306 RLVVL 310


>gi|53802756|ref|YP_115479.1| uracil-DNA glycosylase [Methylococcus capsulatus str. Bath]
 gi|53756517|gb|AAU90808.1| uracil-DNA glycosylase [Methylococcus capsulatus str. Bath]
          Length = 184

 Score = 38.1 bits (87), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 14/84 (16%)

Query: 82  EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRH--NFGGLRATHGVS 139
           E  + +   ++PVG + +  + T GQL DV G           KRH    GG+R T  + 
Sbjct: 95  ELDLLRPALIIPVGKLAASRFLTFGQLGDVVG-----------KRHRVELGGVR-TDLIP 142

Query: 140 ISHRSHGSTGCRQDPGRVFKNKKM 163
           + H S  ST  R++PGR    + +
Sbjct: 143 LPHPSGASTWHRREPGRSLLEQAL 166


>gi|255098787|gb|ACU00734.1| 60S ribosomal protein L3 [Nosema bombycis]
 gi|326573816|gb|ADZ95674.1| 60S ribosomal protein L3 [Nosema bombycis]
          Length = 384

 Score = 38.1 bits (87), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 30/125 (24%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-------DPG 155
           F V + +D  G+T GKGF G +KR          GV+I  R     G R+        P 
Sbjct: 205 FEVNENLDTIGVTKGKGFQGVVKR---------FGVTIQPRK-SRKGIRKVACIGAWHPS 254

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVK-----------GCVP--GAKKNS 202
           RV      AG+MG +R T  N +V  + +   LI  +           G +P  G+ KN 
Sbjct: 255 RVMTTVARAGQMGFHRRTETNKKVYMIGNGNELIKTEFDLTEKPITPLGGIPHYGSIKND 314

Query: 203 WILVR 207
           +I+V+
Sbjct: 315 YIMVK 319


>gi|193083866|gb|ACF09547.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
           KM3-85-F5]
          Length = 350

 Score = 37.7 bits (86), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 21/116 (18%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           +  GQ VDV G+T GKG+ G++KR  FG    TH  S   R  G+ G     G V K  +
Sbjct: 207 YQAGQEVDVVGVTKGKGWQGSIKR--FGLKLLTHKNSKRRRQGGNMGDF-GTGYVRKTIR 263

Query: 163 MAGRMGGNRVTVKNLEVVSVDD------------------KRGLILVKGCVPGAKK 200
            AG++G ++ T  N  ++ + +                  +   ++V+G +PG  K
Sbjct: 264 QAGQVGYHKRTELNKRILRISNPDESEITPAGGFLNYGEVRNPYMIVQGSLPGPAK 319


>gi|126465913|ref|YP_001041022.1| 50S ribosomal protein L3P [Staphylothermus marinus F1]
 gi|212288413|sp|A3DNA4|RL3_STAMF RecName: Full=50S ribosomal protein L3P
 gi|126014736|gb|ABN70114.1| LSU ribosomal protein L3P [Staphylothermus marinus F1]
          Length = 395

 Score = 37.7 bits (86), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 5/81 (6%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGR-VFKNK 161
           F  GQ +D+ G+T GKGF G +KR     L   H     HR        + PG       
Sbjct: 251 FREGQFIDIIGVTKGKGFQGVIKRFGVKELPRWH----KHRKGSRKIGSRSPGFGTMSET 306

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
              G+MG +R T  N  ++ +
Sbjct: 307 PQPGQMGFHRRTEYNKRIIKI 327


>gi|222480857|ref|YP_002567094.1| ribosomal protein L3 [Halorubrum lacusprofundi ATCC 49239]
 gi|222453759|gb|ACM58024.1| ribosomal protein L3 [Halorubrum lacusprofundi ATCC 49239]
          Length = 338

 Score = 37.0 bits (84), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 54/128 (42%), Gaps = 22/128 (17%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  GQ  DV+G+T GKG  G +KR      +  H      R  G+ G   +P RV     
Sbjct: 195 FRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 253

Query: 163 MAGRMGGNRVTVKNLEVVSV---DDKR---GLI----------LVKGCVPGAKKNSWILV 206
             G+ G ++ T  N  ++     DD     G +          L+KG +PG  K    L+
Sbjct: 254 QQGQTGYHQRTELNKRLIDFGEGDDASVDGGFVNYGEVDGEYALIKGSLPGPDKR---LI 310

Query: 207 RDSFKSAV 214
           R  F+ A+
Sbjct: 311 R--FRPAI 316


>gi|284165492|ref|YP_003403771.1| ribosomal protein L3 [Haloterrigena turkmenica DSM 5511]
 gi|284015147|gb|ADB61098.1| ribosomal protein L3 [Haloterrigena turkmenica DSM 5511]
          Length = 339

 Score = 37.0 bits (84), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 22/128 (17%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G+ VD +G+T GKG  G +KR      +  H      R  G+ G   +P RV     
Sbjct: 196 FRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 254

Query: 163 MAGRMGGNRVTVKNLEVVSVDD------KRGLI----------LVKGCVPGAKKNSWILV 206
             G+ G ++ T  N  +V + D        G +          L+KG +PG ++    LV
Sbjct: 255 QQGQTGYHQRTELNKRLVDIGDGADATVDGGFVNYGEVDGPHALIKGSLPGPQQR---LV 311

Query: 207 RDSFKSAV 214
           R  F+ A+
Sbjct: 312 R--FRPAI 317


>gi|282859042|ref|ZP_06268178.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
           ligase [Prevotella bivia JCVIHMP010]
 gi|282588210|gb|EFB93379.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
           ligase [Prevotella bivia JCVIHMP010]
          Length = 485

 Score = 37.0 bits (84), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 7/97 (7%)

Query: 121 SGAMKRHNFGGLRATHGVSIS-HRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           S A+ +H  GGL    GV  +  R H       D  + F+N + A +M  + ++     +
Sbjct: 181 SHAIHQHRIGGLHFEGGVFTNLTRDH------LDYHKTFENYRNAKKMFFDSLSKNAFAI 234

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            + DDK G+I+V+ C    K  S   + D     + C
Sbjct: 235 TNADDKNGMIMVQNCKANIKTYSMQRMADFRAKIIEC 271


>gi|300710375|ref|YP_003736189.1| 50S ribosomal protein L3P [Halalkalicoccus jeotgali B3]
 gi|299124058|gb|ADJ14397.1| 50S ribosomal protein L3P [Halalkalicoccus jeotgali B3]
          Length = 337

 Score = 37.0 bits (84), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 17/114 (14%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G+ +DV+G+T GKG  G +KR      +  H      R  G+ G   +P RV     
Sbjct: 194 FRAGEYLDVSGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 252

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKR------GLI----------LVKGCVPGAKK 200
             G+ G ++ T  N  ++++ ++       GL+          L+KG +PG  K
Sbjct: 253 QQGQTGYHQRTELNKRLLALGEEDDVNPDGGLVNYGEVSGPYTLIKGSLPGPDK 306


>gi|41179042|ref|NP_958398.1| RNA polymerase beta subunit I [Chlamydomonas reinhardtii]
 gi|41017747|sp|Q8HTL6|RPOB1_CHLRE RecName: Full=DNA-directed RNA polymerase subunit beta N-terminal
           section; AltName: Full=PEP; AltName:
           Full=Plastid-encoded RNA polymerase subunit beta
           N-terminal section; Short=RNA polymerase subunit beta
           N-terminal section
 gi|24209933|gb|AAN41266.1| RNA polymerase beta' subunit [Chlamydomonas reinhardtii]
 gi|28269765|tpg|DAA00943.1| TPA_inf: RNA polymerase beta subunit I [Chlamydomonas reinhardtii]
 gi|213517423|gb|ACJ50129.1| RNA polymerase beta subunit I [Chlamydomonas reinhardtii]
          Length = 822

 Score = 37.0 bits (84), Expect = 2.1,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 9/102 (8%)

Query: 30  LDNCQVVVHRTLDKNG-YMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKD 88
           LD+   + +R +  +G  + +Q+G G  +++   +    + S ++  P +K F FR  K 
Sbjct: 496 LDDIDHLKNRRVRTSGELIQIQIGVGLVRLEKTIREKMTYASGLSSLPSQK-FAFRSSKQ 554

Query: 89  DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
            +  PVG   + +  T+G L++       K F+GA+ R  FG
Sbjct: 555 RNQSPVGDAENATQLTIGNLINT------KPFNGAL-REFFG 589


>gi|15825944|pdb|1JJ2|B Chain B, Fully Refined Crystal Structure Of The Haloarcula
           Marismortui Large Ribosomal Subunit At 2.4 Angstrom
           Resolution
 gi|20150989|pdb|1KQS|B Chain B, The Haloarcula Marismortui 50s Complexed With A
           Pretranslocational Intermediate In Protein Synthesis
 gi|22218923|pdb|1K8A|D Chain D, Co-Crystal Structure Of Carbomycin A Bound To The 50s
           Ribosomal Subunit Of Haloarcula Marismortui
 gi|22218957|pdb|1K9M|D Chain D, Co-Crystal Structure Of Tylosin Bound To The 50s Ribosomal
           Subunit Of Haloarcula Marismortui
 gi|22219000|pdb|1KD1|D Chain D, Co-Crystal Structure Of Spiramycin Bound To The 50s
           Ribosomal Subunit Of Haloarcula Marismortui
 gi|22219327|pdb|1M1K|D Chain D, Co-Crystal Structure Of Azithromycin Bound To The 50s
           Ribosomal Subunit Of Haloarcula Marismortui
 gi|24159022|pdb|1M90|D Chain D, Co-Crystal Structure Of Cca-Phe-Caproic Acid-Biotin And
           Sparsomycin Bound To The 50s Ribosomal Subunit
 gi|34811119|pdb|1K73|D Chain D, Co-Crystal Structure Of Anisomycin Bound To The 50s
           Ribosomal Subunit
 gi|34811149|pdb|1KC8|D Chain D, Co-Crystal Structure Of Blasticidin S Bound To The 50s
           Ribosomal Subunit
 gi|34811188|pdb|1N8R|D Chain D, Structure Of Large Ribosomal Subunit In Complex With
           Virginiamycin M
 gi|34811218|pdb|1NJI|D Chain D, Structure Of Chloramphenicol Bound To The 50s Ribosomal
           Subunit
 gi|37927902|pdb|1Q7Y|D Chain D, Crystal Structure Of Ccdap-Puromycin Bound At The Peptidyl
           Transferase Center Of The 50s Ribosomal Subunit
 gi|37927937|pdb|1Q81|D Chain D, Crystal Structure Of Minihelix With 3' Puromycin Bound To
           A- Site Of The 50s Ribosomal Subunit.
 gi|37927973|pdb|1Q82|D Chain D, Crystal Structure Of Cc-Puromycin Bound To The A-Site Of
           The 50s Ribosomal Subunit
 gi|37928009|pdb|1Q86|D Chain D, Crystal Structure Of Cca-Phe-Cap-Biotin Bound
           Simultaneously At Half Occupancy To Both The A-Site And
           P- Site Of The The 50s Ribosomal Subunit.
 gi|39654674|pdb|1QVF|B Chain B, Structure Of A Deacylated Trna Minihelix Bound To The E
           Site Of The Large Ribosomal Subunit Of Haloarcula
           Marismortui
 gi|39654707|pdb|1QVG|B Chain B, Structure Of Cca Oligonucleotide Bound To The Trna Binding
           Sites Of The Large Ribosomal Subunit Of Haloarcula
           Marismortui
 gi|55670537|pdb|1W2B|B Chain B, Trigger Factor Ribosome Binding Domain In Complex With 50s
 gi|145580205|pdb|2OTL|B Chain B, Girodazole Bound To The Large Subunit Of Haloarcula
           Marismortui
 gi|228311913|pdb|3CXC|B Chain B, The Structure Of An Enhanced Oxazolidinone Inhibitor Bound
           To The 50s Ribosomal Subunit Of H. Marismortui
 gi|228312143|pdb|3G4S|B Chain B, Co-Crystal Structure Of Tiamulin Bound To The Large
           Ribosomal Subunit
 gi|228312199|pdb|3G6E|B Chain B, Co-Crystal Structure Of Homoharringtonine Bound To The
           Large Ribosomal Subunit
 gi|228312235|pdb|3G71|B Chain B, Co-Crystal Structure Of Bruceantin Bound To The Large
           Ribosomal Subunit
          Length = 337

 Score = 37.0 bits (84), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 51/128 (39%), Gaps = 22/128 (17%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G+  DV G+T GKG  G +KR      +  H      R  G+ G   +P RV     
Sbjct: 194 FRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 252

Query: 163 MAGRMGGNRVTVKNLEVVSVDD----------------KRGLILVKGCVPGAKKNSWILV 206
             G+ G ++ T  N  ++ + +                     LVKG VPG  K    LV
Sbjct: 253 QQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKR---LV 309

Query: 207 RDSFKSAV 214
           R  F+ AV
Sbjct: 310 R--FRPAV 315


>gi|48477712|ref|YP_023418.1| 50S ribosomal protein L3P [Picrophilus torridus DSM 9790]
 gi|74567866|sp|Q6L1C7|RL3_PICTO RecName: Full=50S ribosomal protein L3P
 gi|48430360|gb|AAT43225.1| large subunit ribosomal protein L3P [Picrophilus torridus DSM 9790]
          Length = 329

 Score = 37.0 bits (84), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 4/93 (4%)

Query: 94  VGSVFSPSYFT-VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +GS  S S F+  G  VDV  +T GKGF G +KR    G++     +  HR    T    
Sbjct: 174 LGSNISFSDFSKPGNFVDVIAVTKGKGFQGVVKRF---GVKLLPRKNRKHRRMIGTLGPW 230

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
            P  V      AG++G ++ T+ N+ ++  D K
Sbjct: 231 HPDWVRNTVPQAGQVGFHQRTIHNIRIIKFDTK 263


>gi|296242583|ref|YP_003650070.1| 50S ribosomal protein L3P [Thermosphaera aggregans DSM 11486]
 gi|296095167|gb|ADG91118.1| LSU ribosomal protein L3P [Thermosphaera aggregans DSM 11486]
          Length = 395

 Score = 37.0 bits (84), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 5/81 (6%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG-STGCRQDPGRVFKNK 161
           FT GQ +DV G+T GKGF G +KR     L   H     HR      G R          
Sbjct: 251 FTEGQFIDVIGVTKGKGFQGVVKRFGVKVLPRWH----KHRKGARKIGSRSPAFGTMSEP 306

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +R T  N  ++ +
Sbjct: 307 PQAGQTGFHRRTDYNKRILRI 327


>gi|55378384|ref|YP_136234.1| 50S ribosomal protein L3P [Haloarcula marismortui ATCC 43049]
 gi|57015335|sp|P20279|RL3_HALMA RecName: Full=50S ribosomal protein L3P; AltName: Full=Hl1;
           AltName: Full=Hmal3
 gi|50513471|pdb|1S72|B Chain B, Refined Crystal Structure Of The Haloarcula Marismortui
           Large Ribosomal Subunit At 2.4 Angstrom Resolution
 gi|66360785|pdb|1YHQ|B Chain B, Crystal Structure Of Azithromycin Bound To The G2099a
           Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
 gi|66360818|pdb|1YI2|B Chain B, Crystal Structure Of Erythromycin Bound To The G2099a
           Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
 gi|66360851|pdb|1YIJ|B Chain B, Crystal Structure Of Telithromycin Bound To The G2099a
           Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
 gi|66360884|pdb|1YIT|B Chain B, Crystal Structure Of Virginiamycin M And S Bound To The
           50s Ribosomal Subunit Of Haloarcula Marismortui
 gi|66360917|pdb|1YJ9|B Chain B, Crystal Structure Of The Mutant 50s Ribosomal Subunit Of
           Haloarcula Marismortui Containing A Three Residue
           Deletion In L22
 gi|66360950|pdb|1YJN|B Chain B, Crystal Structure Of Clindamycin Bound To The G2099a
           Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
 gi|66360983|pdb|1YJW|B Chain B, Crystal Structure Of Quinupristin Bound To The G2099a
           Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
 gi|83753127|pdb|1VQ4|B Chain B, The Structure Of The Transition State Analogue "daa" Bound
           To The Large Ribosomal Subunit Of Haloarcula Marismortui
 gi|83753159|pdb|1VQ5|B Chain B, The Structure Of The Transition State Analogue "raa" Bound
           To The Large Ribosomal Subunit Of Haloarcula Marismortui
 gi|83753191|pdb|1VQ6|B Chain B, The Structure Of C-Hpmn And Cca-Phe-Cap-Bio Bound To The
           Large Ribosomal Subunit Of Haloarcula Marismortui
 gi|83753223|pdb|1VQ7|B Chain B, The Structure Of The Transition State Analogue "dca" Bound
           To The Large Ribosomal Subunit Of Haloarcula Marismortui
 gi|83753254|pdb|1VQ8|B Chain B, The Structure Of Ccda-Phe-Cap-Bio And The Antibiotic
           Sparsomycin Bound To The Large Ribosomal Subunit Of
           Haloarcula Marismortui
 gi|83753286|pdb|1VQ9|B Chain B, The Structure Of Cca-Phe-Cap-Bio And The Antibiotic
           Sparsomycin Bound To The Large Ribosomal Subunit Of
           Haloarcula Marismortui
 gi|83753317|pdb|1VQK|B Chain B, The Structure Of Ccda-Phe-Cap-Bio Bound To The A Site Of
           The Ribosomal Subunit Of Haloarcula Marismortui
 gi|83753348|pdb|1VQL|B Chain B, The Structure Of The Transition State Analogue "dcsn"
           Bound To The Large Ribosomal Subunit Of Haloarcula
           Marismortui
 gi|83753379|pdb|1VQM|B Chain B, The Structure Of The Transition State Analogue "dan" Bound
           To The Large Ribosomal Subunit Of Haloarcula Marismortui
 gi|83753411|pdb|1VQN|B Chain B, The Structure Of Cc-Hpmn And Cca-Phe-Cap-Bio Bound To The
           Large Ribosomal Subunit Of Haloarcula Marismortui
 gi|83753442|pdb|1VQO|B Chain B, The Structure Of Ccpmn Bound To The Large Ribosomal
           Subunit Haloarcula Marismortui
 gi|83753474|pdb|1VQP|B Chain B, The Structure Of The Transition State Analogue "rap" Bound
           To The Large Ribosomal Subunit Of Haloarcula Marismortui
 gi|145580174|pdb|2OTJ|B Chain B, 13-Deoxytedanolide Bound To The Large Subunit Of
           Haloarcula Marismortui
 gi|171848838|pdb|2QA4|B Chain B, A More Complete Structure Of The The L7L12 STALK OF THE
           Haloarcula Marismortui 50s Large Ribosomal Subunit
 gi|188596003|pdb|3CC2|B Chain B, The Refined Crystal Structure Of The Haloarcula
           Marismortui Large Ribosomal Subunit At 2.4 Angstrom
           Resolution With Rrna Sequence For The 23s Rrna And
           Genome-Derived Sequences For R-Proteins
 gi|188596034|pdb|3CC4|B Chain B, Co-Crystal Structure Of Anisomycin Bound To The 50s
           Ribosomal Subunit
 gi|188596065|pdb|3CC7|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation C2487u
 gi|188596096|pdb|3CCE|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation U2535a
 gi|188596127|pdb|3CCJ|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation C2534u
 gi|188596158|pdb|3CCL|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation U2535c. Density For Anisomycin Is
           Visible But Not Included In Model.
 gi|188596189|pdb|3CCM|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation G2611u
 gi|188596220|pdb|3CCQ|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation A2488u
 gi|188596251|pdb|3CCR|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation A2488c. Density For Anisomycin Is
           Visible But Not Included In The Model.
 gi|188596282|pdb|3CCS|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation G2482a
 gi|188596313|pdb|3CCU|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation G2482c
 gi|188596344|pdb|3CCV|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation G2616a
 gi|188596375|pdb|3CD6|B Chain B, Co-Cystal Of Large Ribosomal Subunit Mutant G2616a With
           Cc- Puromycin
 gi|194368706|pdb|3CPW|B Chain B, The Structure Of The Antibiotic Linezolid Bound To The
           Large Ribosomal Subunit Of Haloarcula Marismortui
 gi|206581909|pdb|3CMA|B Chain B, The Structure Of Cca And Cca-Phe-Cap-Bio Bound To The
           Large Ribosomal Subunit Of Haloarcula Marismortui
 gi|206581942|pdb|3CME|B Chain B, The Structure Of Ca And Cca-Phe-Cap-Bio Bound To The Large
           Ribosomal Subunit Of Haloarcula Marismortui
 gi|208435496|pdb|2QEX|B Chain B, Negamycin Binds To The Wall Of The Nascent Chain Exit
           Tunnel Of The 50s Ribosomal Subunit
 gi|290790037|pdb|3I55|B Chain B, Co-Crystal Structure Of Mycalamide A Bound To The Large
           Ribosomal Subunit
 gi|290790068|pdb|3I56|B Chain B, Co-Crystal Structure Of Triacetyloleandomcyin Bound To The
           Large Ribosomal Subunit
 gi|55231109|gb|AAV46528.1| 50S ribosomal protein L3 [Haloarcula marismortui ATCC 43049]
          Length = 338

 Score = 37.0 bits (84), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 51/128 (39%), Gaps = 22/128 (17%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G+  DV G+T GKG  G +KR      +  H      R  G+ G   +P RV     
Sbjct: 195 FRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 253

Query: 163 MAGRMGGNRVTVKNLEVVSVDD----------------KRGLILVKGCVPGAKKNSWILV 206
             G+ G ++ T  N  ++ + +                     LVKG VPG  K    LV
Sbjct: 254 QQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKR---LV 310

Query: 207 RDSFKSAV 214
           R  F+ AV
Sbjct: 311 R--FRPAV 316


>gi|207109616|ref|ZP_03243778.1| 50S ribosomal protein L3 [Helicobacter pylori HPKX_438_CA4C1]
          Length = 116

 Score = 36.6 bits (83), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 29/134 (21%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57
           + +K+GM+    I+    PVT+L         L+N + +V   + K    A++   G+ K
Sbjct: 4   LVQKIGMS--RTIDANSTPVTLLKVLQAKVCQLENGKALVAYAMHKKHNKAIE---GQQK 58

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
              +SK     F+++  S +K+L +  +   + L  V + F                T G
Sbjct: 59  KYQLSKEF-NHFATLKASQQKELGDLDLSALETLKRVKASFK---------------TKG 102

Query: 118 KGFSGAMKRHNFGG 131
           +GF+G MKR NF G
Sbjct: 103 RGFAGVMKRWNFQG 116


>gi|330508498|ref|YP_004384926.1| 50S ribosomal protein L3 [Methanosaeta concilii GP-6]
 gi|328929306|gb|AEB69108.1| ribosomal protein L3 [Methanosaeta concilii GP-6]
          Length = 334

 Score = 36.6 bits (83), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 24/133 (18%)

Query: 92  LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTG-- 149
           +P+ SVF      +G L+D + +T GKG  G ++R          G++++ R H  TG  
Sbjct: 183 VPISSVFE-----LGDLMDTSAVTKGKGTQGPVRR---------WGIAMAKRKHARTGKV 228

Query: 150 ------CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKN 201
                     P  +       G+MG ++ T  N  ++ +      I   G  P  G  KN
Sbjct: 229 RHVGNLGPWHPAHISWRVPQLGQMGYHQRTEYNKRLMFIGTDGSKITPDGGFPGYGVIKN 288

Query: 202 SWILVRDSFKSAV 214
            +IL++ S    +
Sbjct: 289 QYILIKGSVPGPI 301


>gi|154150075|ref|YP_001403693.1| 50S ribosomal protein L3P [Candidatus Methanoregula boonei 6A8]
 gi|166233155|sp|A7I5N9|RL3_METB6 RecName: Full=50S ribosomal protein L3P
 gi|153998627|gb|ABS55050.1| ribosomal protein L3 [Methanoregula boonei 6A8]
          Length = 337

 Score = 36.6 bits (83), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 18/113 (15%)

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G   D+T +TIGKG  G +KR      +  H V    R  G+ G   +P  V      +
Sbjct: 195 TGAYADITAITIGKGTQGPVKRWGVTLRKRKHSVGGKERHVGTLGP-WNPHHVRWEVPQS 253

Query: 165 GRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCVPGAKK 200
           G+MG  + T  N  ++ + +                 +   +++KG +PG  K
Sbjct: 254 GQMGYQQRTEFNKRILKIGENGAEITPAGGFLNYGVIRNAYVVIKGSIPGPAK 306


>gi|315425680|dbj|BAJ47337.1| large subunit ribosomal protein L3 [Candidatus Caldiarchaeum
           subterraneum]
 gi|315427562|dbj|BAJ49161.1| large subunit ribosomal protein L3 [Candidatus Caldiarchaeum
           subterraneum]
          Length = 320

 Score = 36.6 bits (83), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 15/88 (17%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTG------CRQDPGR 156
           F  GQ VDV  +T GKGF G +KR         +GVSI  R    T          +P  
Sbjct: 184 FKEGQFVDVIAVTKGKGFQGVVKR---------YGVSILQRKSRKTRRGVAAIGPWNPHY 234

Query: 157 VFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           V      +G+MG +R T  N  ++ + D
Sbjct: 235 VMYTVPRSGQMGYHRRTEFNKRILRIGD 262


>gi|315425735|dbj|BAJ47391.1| large subunit ribosomal protein L3 [Candidatus Caldiarchaeum
           subterraneum]
          Length = 289

 Score = 36.2 bits (82), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 15/88 (17%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTG------CRQDPGR 156
           F  GQ VDV  +T GKGF G +KR         +GVSI  R    T          +P  
Sbjct: 184 FKEGQFVDVIAVTKGKGFQGVVKR---------YGVSILQRKSRKTRRGVAAIGPWNPHY 234

Query: 157 VFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           V      +G+MG +R T  N  ++ + D
Sbjct: 235 VMYTVPRSGQMGYHRRTEFNKRILRIGD 262


>gi|294496017|ref|YP_003542510.1| 50S ribosomal protein L3P [Methanohalophilus mahii DSM 5219]
 gi|292667016|gb|ADE36865.1| LSU ribosomal protein L3P [Methanohalophilus mahii DSM 5219]
          Length = 337

 Score = 36.2 bits (82), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 18/115 (15%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F+ G ++DV  +T G G  G +KR      +  H    S R  G+ G    P   ++  +
Sbjct: 193 FSEGNIIDVAAITRGYGTEGPVKRWGIQLAKNKHSRQSSLRQVGTLGPWNPPHVSWRVPQ 252

Query: 163 MAGRMGGNRVTVKNLEVVSVDD------------KRGL-----ILVKGCVPGAKK 200
           M G+ G ++ T  N  ++ V                GL     ILVKG VPG  K
Sbjct: 253 M-GQAGYHQRTEYNKRILKVSSDVDEVNPAGGFVNYGLVGGDYILVKGTVPGPSK 306


>gi|307354323|ref|YP_003895374.1| 50S ribosomal protein L3 [Methanoplanus petrolearius DSM 11571]
 gi|307157556|gb|ADN36936.1| ribosomal protein L3 [Methanoplanus petrolearius DSM 11571]
          Length = 337

 Score = 36.2 bits (82), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 18/113 (15%)

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            GQ +DVT +T GKG  GA+KR      +  H      R  G+ G    P  V       
Sbjct: 195 AGQYIDVTAVTTGKGTQGAVKRWGIQVRKRKHSRGKKKRHIGNLGP-WTPHHVRWQVPQM 253

Query: 165 GRMGGNRVTVKNLEVVSVDDK----------------RG-LILVKGCVPGAKK 200
           G+MG  + T  N  ++ + +                 RG  +L+KG +PG  K
Sbjct: 254 GQMGYQQRTEFNKRILRIGNNPEEINPDGGFLHYGLVRGKYVLIKGSIPGPTK 306


>gi|2425176|dbj|BAA22270.1| ribosomal protein L3 [Halobacterium salinarum]
          Length = 330

 Score = 36.2 bits (82), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 18/114 (15%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G+  D  G+T GKG  G +KR      +  H   ++ R  G+ G   +P RV     
Sbjct: 188 FRAGEFADAAGITKGKGTQGPVKRWGVQKRKGKHARHVARRI-GNLGP-WNPSRVRSTVP 245

Query: 163 MAGRMGGNRVTVKNLEVVSVDD----------------KRGLILVKGCVPGAKK 200
             G+ G ++ T  N  ++ ++D                     LVKG VPG ++
Sbjct: 246 QQGQTGYHQRTELNKRLIDINDGDEPSPDGGFPNYGEVDGPYTLVKGSVPGPEQ 299


>gi|289597193|ref|YP_003483889.1| ribosomal protein L3 [Aciduliprofundum boonei T469]
 gi|289534980|gb|ADD09327.1| ribosomal protein L3 [Aciduliprofundum boonei T469]
          Length = 340

 Score = 36.2 bits (82), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 14/115 (12%)

Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
           G+ VDV  +T GKGF G +KR    G++  +  +  HR    T     P  V      AG
Sbjct: 191 GKFVDVIAITKGKGFQGHVKRF---GVKLLNQKNRKHRRMIGTLGPWHPDWVRYTVPQAG 247

Query: 166 RMGGNRVTVKNLEVVSVDD-------KRGLILV--KGCVP--GAKKNSWILVRDS 209
           +MG ++ T  N  +V   D       KR  I +  KG  P  G  KN+++L+  S
Sbjct: 248 QMGYHQRTEYNKRIVKYVDFIEENGEKRLAIDITPKGGFPHYGEVKNAYVLIHGS 302


>gi|322374619|ref|ZP_08049133.1| beta-galactosidase [Streptococcus sp. C300]
 gi|321280119|gb|EFX57158.1| beta-galactosidase [Streptococcus sp. C300]
          Length = 645

 Score = 35.8 bits (81), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 4/83 (4%)

Query: 93  PVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF---GGLRATHGVSISHRSHGSTG 149
           P   V     +  GQLVDVT  T G  +     +  F   G     HGVSI H  +G+ G
Sbjct: 451 PQLYVLKTKVYKEGQLVDVTEDTFGYRYFNWTAKEGFSLNGERMKFHGVSI-HHDNGALG 509

Query: 150 CRQDPGRVFKNKKMAGRMGGNRV 172
             ++    ++  K+   MG N +
Sbjct: 510 AEENYKATYRKLKLLKDMGVNSI 532


>gi|147919334|ref|YP_686930.1| 50S ribosomal protein L3P [uncultured methanogenic archaeon RC-I]
 gi|121685298|sp|Q0W1Y9|RL3_UNCMA RecName: Full=50S ribosomal protein L3P
 gi|110622326|emb|CAJ37604.1| 50S ribosomal protein L3P [uncultured methanogenic archaeon RC-I]
          Length = 337

 Score = 35.8 bits (81), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 8/138 (5%)

Query: 79  KLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGV 138
           K FEF        + +  VF+P     G+LVDV+ +T G G  G + R      +  H  
Sbjct: 174 KRFEFAKSLMGKAVGIKDVFAP-----GELVDVSAITKGYGTQGPVVRWGIATQKRKHAR 228

Query: 139 SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--P 196
           +   R  G+ G   +P R+       G+ G ++ T  N  ++ + DK   I   G     
Sbjct: 229 TGKKRHVGNLGP-WNPHRIRWQVPQLGQTGYHQRTEYNKRILKMGDKAEEITPAGGFLHY 287

Query: 197 GAKKNSWILVRDSFKSAV 214
           G  +N +I+++ S    V
Sbjct: 288 GLIRNDYIMLKGSIPGPV 305


>gi|170516812|gb|ACB15214.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
           DeepAnt-15E7]
          Length = 358

 Score = 35.4 bits (80), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 3/90 (3%)

Query: 95  GSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP 154
           G++     +  GQ +DV G+T GKG+ GA+KR     L  +H  S   R  G+ G     
Sbjct: 207 GAITLDDVYETGQEIDVVGVTKGKGWQGAIKRWGIKLL--SHKNSKRRRQGGNMGDFGT- 263

Query: 155 GRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           G V K  + AG++G +  T  N  ++ V +
Sbjct: 264 GYVRKTIRQAGQVGYHNRTELNKRILRVSN 293


>gi|303388761|ref|XP_003072614.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506]
 gi|303301755|gb|ADM11254.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506]
          Length = 383

 Score = 35.4 bits (80), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 8/103 (7%)

Query: 82  EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSIS 141
           E+ +++ +  + +  VF  +     + +DV G+T GKGF G +KR  FG  +        
Sbjct: 189 EWALERLEKEIQIAEVFGEN-----ENIDVIGVTKGKGFQGTVKR--FGVRKQPRKSRKG 241

Query: 142 HRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
            R     G    P RV  +   AG+MG +R T KN  V  + +
Sbjct: 242 IRKVACIGA-WHPSRVMYSVARAGQMGFHRRTEKNKRVYMIGN 283


>gi|19173079|ref|NP_597630.1| 60S RIBOSOMAL PROTEIN L3 [Encephalitozoon cuniculi GB-M1]
 gi|85014317|ref|XP_955654.1| 60S ribosomal protein L3 [Encephalitozoon cuniculi GB-M1]
 gi|51701710|sp|Q8SQI3|RL3_ENCCU RecName: Full=60S ribosomal protein L3
 gi|19168746|emb|CAD26265.1| 60S RIBOSOMAL PROTEIN L3 [Encephalitozoon cuniculi GB-M1]
 gi|19171348|emb|CAD27073.1| 60S RIBOSOMAL PROTEIN L3 [Encephalitozoon cuniculi GB-M1]
          Length = 383

 Score = 35.4 bits (80), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 8/103 (7%)

Query: 82  EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSIS 141
           E+ + + +  + +G VF      V + +D  G+T GKGF G +KR  FG  +        
Sbjct: 189 EWALGRLEKEIAIGEVFG-----VNENIDTIGVTKGKGFQGTVKR--FGVRKQPRKSRKG 241

Query: 142 HRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
            R     G    P RV  +   AG+MG +R T KN  V  + +
Sbjct: 242 IRKVACIGA-WHPSRVMYSIARAGQMGFHRRTEKNKRVYMIGN 283


>gi|303390711|ref|XP_003073586.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506]
 gi|303302733|gb|ADM12226.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506]
          Length = 383

 Score = 35.4 bits (80), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 8/103 (7%)

Query: 82  EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSIS 141
           E+ +++ +  + +  VF  +     + +DV G+T GKGF G +KR  FG  +        
Sbjct: 189 EWALERLEKEIQIAEVFGEN-----ENIDVIGVTKGKGFQGTVKR--FGVRKQPRKSRKG 241

Query: 142 HRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
            R     G    P RV  +   AG+MG +R T KN  V  + +
Sbjct: 242 IRKVACIGA-WHPSRVMYSVARAGQMGFHRRTEKNKRVYMIGN 283


>gi|300121321|emb|CBK21701.2| unnamed protein product [Blastocystis hominis]
 gi|300123206|emb|CBK24479.2| unnamed protein product [Blastocystis hominis]
 gi|300176312|emb|CBK23623.2| unnamed protein product [Blastocystis hominis]
 gi|300176758|emb|CBK25327.2| unnamed protein product [Blastocystis hominis]
          Length = 387

 Score = 35.4 bits (80), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 74/195 (37%), Gaps = 38/195 (19%)

Query: 30  LDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD 89
           +D CQVV  R L       +++G  +A +  +   + G      V+  K L E  V+   
Sbjct: 154 VDYCQVV--RVLAHTQIQKLKIGQKKAHLMEIQ--VNGGNMEEKVAFAKSLLEKEVK--- 206

Query: 90  DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTG 149
               V  VF PS     +++D  G+T GKGF G   R  +G  R       +HR      
Sbjct: 207 ----VSDVFEPS-----EMIDTIGVTKGKGFEGVTTR--WGTTRLPRK---THRGLRKVA 252

Query: 150 C--RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-------------DDKRGLILVKGC 194
           C     P RV      AG+ G +  T  N ++  +             D     I   G 
Sbjct: 253 CIGAWHPSRVHFTVPRAGQNGYHHRTDVNKKIYRIGAAGDAKSASTEADLTEKSITPMGG 312

Query: 195 VP--GAKKNSWILVR 207
            P  G   N WI+V+
Sbjct: 313 FPHYGEVNNDWIMVK 327


>gi|257076559|ref|ZP_05570920.1| 50S ribosomal protein L3P [Ferroplasma acidarmanus fer1]
          Length = 319

 Score = 35.4 bits (80), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 23/140 (16%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
            + + G  VDV  +T GKGF G +KR    G++     +  HR    T     P  V   
Sbjct: 172 DFNSTGSFVDVISVTKGKGFQGVVKRF---GVKLLPRSNRKHRRMIGTLGPWHPDWVRNT 228

Query: 161 KKMAGRMGGNRVTVKNLEVV------SVDD--------KRGL-----ILVKGCVPGAKKN 201
              AG++G ++ T+ N+ ++       VD+        K GL     IL+ G + G  K 
Sbjct: 229 VPQAGQVGLHQRTIHNIRIMKTATKEQVDEINVKGGFLKYGLVRNDYILLYGSISGPSKR 288

Query: 202 SWILVRDSFKSAVNCKGKVS 221
             I +RD  + AV    KV 
Sbjct: 289 -LIKMRDPARQAVPNTDKVD 307


>gi|330805639|ref|XP_003290787.1| 60S ribosomal protein L3 [Dictyostelium purpureum]
 gi|325079065|gb|EGC32684.1| 60S ribosomal protein L3 [Dictyostelium purpureum]
          Length = 399

 Score = 35.0 bits (79), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 63/155 (40%), Gaps = 37/155 (23%)

Query: 83  FRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKR--------HNFGGLRA 134
           F V   +  + V  VFS +     +++DV G+T GKGF+G +KR            GLR 
Sbjct: 197 FAVANFEKTVSVSGVFSEN-----EMIDVIGVTKGKGFNGVIKRWGVRKLPRKTHKGLRK 251

Query: 135 THGVSISHRSHGST-----GCRQDPGRVFKNKKM-----AGRMGGNRVTVKNLEVVSVDD 184
              +   H S  ST     G      RV +NKK+     A  + G +++    E    + 
Sbjct: 252 VACIGAWHPSRVSTTVPRAGQLGYHHRVERNKKIYRIGQAQPVEGKQISTGKTEFDLTEK 311

Query: 185 K--------------RGLILVKGCVPGAKKNSWIL 205
                          +  I+VKGCV G +K +  L
Sbjct: 312 TINPMGGFTHYGVVDQDFIMVKGCVAGPRKRALTL 346


>gi|14278035|pdb|1GIY|E Chain E, Crystal Structure Of The Ribosome At 5.5 A Resolution.
           This File, 1giy, Contains The 50s Ribosome Subunit. The
           30s Ribosome Subunit, Three Trna, And Mrna Molecules Are
           In The File 1gix
 gi|28373724|pdb|1ML5|EE Chain e, Structure Of The E. Coli Ribosomal Termination Complex
           With Release Factor 2
 gi|66361021|pdb|1YL3|E Chain E, Crystal Structure Of 70s Ribosome With Thrs Operator And
           Trnas. Large Subunit. The Coordinates For The Small
           Subunit Are In The Pdb Entry 1yl4.
 gi|88192261|pdb|2B66|E Chain E, 50s Ribosomal Subunit From A Crystal Structure Of Release
           Factor Rf1, Trnas And Mrna Bound To The Ribosome. This
           File Contains The 50s Subunit From A Crystal Structure
           Of Release Factor Rf1, Trnas And Mrna Bound To The
           Ribosome And Is Described In Remark 400
 gi|88192324|pdb|2B9N|E Chain E, 50s Ribosomal Subunit From A Crystal Structure Of Release
           Factor Rf2, Trnas And Mrna Bound To The Ribosome. This
           File Contains The 50s Subunit From A Crystal Structure
           Of Release Factor Rf1, Trnas And Mrna Bound To The
           Ribosome And Is Described In Remark 400.
 gi|88192379|pdb|2B9P|E Chain E, 50s Ribosomal Subunit From A Crystal Structure Of The
           Ribosome In Complex With Trnas And Mrna With A Stop
           Codon In The A-Site. This File Contains The 50s Subunit
           From A Crystal Structure Of The Ribosome In Complex With
           Trnas And Mrna With A Stop Codon In The A-Site And Is
           Described In Remark 400
          Length = 338

 Score = 35.0 bits (79), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 44/114 (38%), Gaps = 17/114 (14%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G+  DV G+T GKG  G +KR      +  H      R  G+ G   +P RV     
Sbjct: 194 FRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 252

Query: 163 MAGRMGGNRVTVKNLEVVSVDD----------------KRGLILVKGCVPGAKK 200
             G+ G ++ T  N  ++ + +                     LVKG VPG  K
Sbjct: 253 QQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDK 306


>gi|27066406|pdb|1FFK|B Chain B, Crystal Structure Of The Large Ribosomal Subunit From
           Haloarcula Marismortui At 2.4 Angstrom Resolution
          Length = 337

 Score = 35.0 bits (79), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 44/114 (38%), Gaps = 17/114 (14%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G+  DV G+T GKG  G +KR      +  H      R  G+ G   +P RV     
Sbjct: 193 FRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 251

Query: 163 MAGRMGGNRVTVKNLEVVSVDD----------------KRGLILVKGCVPGAKK 200
             G+ G ++ T  N  ++ + +                     LVKG VPG  K
Sbjct: 252 QQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDK 305


>gi|148801|gb|AAA86859.1| ribosomal protein L3 [Haloarcula marismortui]
          Length = 338

 Score = 35.0 bits (79), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 44/114 (38%), Gaps = 17/114 (14%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G+  DV G+T GKG  G +KR      +  H      R  G+ G   +P RV     
Sbjct: 195 FRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 253

Query: 163 MAGRMGGNRVTVKNLEVVSVDD----------------KRGLILVKGCVPGAKK 200
             G+ G ++ T  N  ++ + +                     LVKG VPG  K
Sbjct: 254 QQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDK 307


>gi|297527410|ref|YP_003669434.1| ribosomal protein L3 [Staphylothermus hellenicus DSM 12710]
 gi|297256326|gb|ADI32535.1| ribosomal protein L3 [Staphylothermus hellenicus DSM 12710]
          Length = 395

 Score = 35.0 bits (79), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 5/81 (6%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGR-VFKNK 161
           F  GQ +D+ G+T GKGF G +KR     L   H     HR        + PG       
Sbjct: 251 FREGQFIDIIGVTKGKGFQGVIKRFGVKELPRWH----KHRKGSRKIGSRSPGFGTMSET 306

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
              G+ G +R T  N  ++ +
Sbjct: 307 PQPGQTGFHRRTEYNKRIIKI 327


>gi|322388193|ref|ZP_08061797.1| beta-galactosidase [Streptococcus infantis ATCC 700779]
 gi|321140865|gb|EFX36366.1| beta-galactosidase [Streptococcus infantis ATCC 700779]
          Length = 2419

 Score = 35.0 bits (79), Expect = 7.3,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 16/85 (18%)

Query: 97  VFSPSYFTVGQLVDVTGMTIG---------KGFSGAMKRHNFGGLRATHGVSISHRSHGS 147
           V     +  GQLVDVT  T G         +GFS   +R  F      HGVSI H  +G+
Sbjct: 434 VLKTKVYNEGQLVDVTEDTFGYRYFNWTAKEGFSLNGERMKF------HGVSI-HHDNGA 486

Query: 148 TGCRQDPGRVFKNKKMAGRMGGNRV 172
            G  ++    ++  K+   MG N +
Sbjct: 487 LGAEENYKATYRKLKLLKDMGVNSI 511


>gi|257053359|ref|YP_003131192.1| 50S ribosomal protein L3P [Halorhabdus utahensis DSM 12940]
 gi|256692122|gb|ACV12459.1| ribosomal protein L3 [Halorhabdus utahensis DSM 12940]
          Length = 338

 Score = 35.0 bits (79), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 17/112 (15%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G+  DV G+T GKG  G +KR      +  H      R  G+ G   +P RV     
Sbjct: 195 FRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 253

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLI----------------LVKGCVPGA 198
             G+ G ++ T  N  ++   D+  +                 L+KG +PG 
Sbjct: 254 QQGQTGYHQRTELNKRLIDFGDEDDVTPDGGFVNYGEVEGNYALIKGSIPGP 305


>gi|320107975|ref|YP_004183565.1| beta-lactamase [Terriglobus saanensis SP1PR4]
 gi|319926496|gb|ADV83571.1| beta-lactamase [Terriglobus saanensis SP1PR4]
          Length = 484

 Score = 35.0 bits (79), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 52/141 (36%), Gaps = 24/141 (17%)

Query: 15  VYNIEGRRIPVTVLHLDNCQVV-VHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVN 73
           +YN+E     V  LHLD    V   R +D  G  AV  G G         P        N
Sbjct: 358 IYNVEENPFGVKALHLDTSPAVCTFRLIDNEGEYAVTAGIGNWLEGETDMPGARLHHGYN 417

Query: 74  VSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLR 133
           ++P + +   R   D D L +  +F  + F    +                    F G R
Sbjct: 418 LTPLRVVAGGR-WLDSDTLELNWIFPETTFRDTVVC------------------RFAGDR 458

Query: 134 ATHGVSISHRSHGSTGCRQDP 154
               +++S R + ++G RQDP
Sbjct: 459 ----ITVSRRVNVNSGARQDP 475


>gi|327466795|gb|EGF12319.1| hypothetical protein HMPREF9386_2380 [Streptococcus sanguinis
           SK330]
          Length = 629

 Score = 35.0 bits (79), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 61  VSKPMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
           + KP+ GF  S + V  K KLF  R+ K D++  VG V SP YF
Sbjct: 139 IVKPVEGFSDSKIKVGDKIKLFSSRLLKTDEVTIVGIVNSPEYF 182


>gi|257387876|ref|YP_003177649.1| 50S ribosomal protein L3P [Halomicrobium mukohataei DSM 12286]
 gi|257170183|gb|ACV47942.1| ribosomal protein L3 [Halomicrobium mukohataei DSM 12286]
          Length = 338

 Score = 34.7 bits (78), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 50/128 (39%), Gaps = 22/128 (17%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F  G+  D+  +T GKG  G +KR      +  H      R  G+ G   +P RV     
Sbjct: 195 FRAGEYADIAAVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 253

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRG----------------LILVKGCVPGAKKNSWILV 206
             G+ G ++ T  N  ++ + D                     LVKG VPG  +    LV
Sbjct: 254 QQGQTGYHQRTELNKRLIDIGDGDDASVDGGFVNYGEVDGPYTLVKGSVPGPDQR---LV 310

Query: 207 RDSFKSAV 214
           R  F+ AV
Sbjct: 311 R--FRPAV 316


>gi|308798657|ref|XP_003074108.1| ribosomal protein L3.e, cytosolic-rice sp|P35684|RL3_ORYSA 60S
           ribosomal p (ISS) [Ostreococcus tauri]
 gi|116000280|emb|CAL49960.1| ribosomal protein L3.e, cytosolic-rice sp|P35684|RL3_ORYSA 60S
           ribosomal p (ISS) [Ostreococcus tauri]
          Length = 421

 Score = 34.7 bits (78), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 12/96 (12%)

Query: 89  DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148
           +  +PV SVF        +++D+ G+T GKGF G + R     L        +HR     
Sbjct: 234 EKTVPVDSVFQQD-----EMIDLIGVTKGKGFQGVVTRWGVTKLPRK-----THRGLRKV 283

Query: 149 GC--RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           GC     P RV      AG+MG +  T  N +V  +
Sbjct: 284 GCIGAWHPSRVSYTVARAGQMGYHHRTELNKKVYKI 319


>gi|13541155|ref|NP_110843.1| 50S ribosomal protein L3P [Thermoplasma volcanium GSS1]
 gi|42559678|sp|Q97BX7|RL3_THEVO RecName: Full=50S ribosomal protein L3P
 gi|14324543|dbj|BAB59470.1| ribosomal protein large subunit L3 [Thermoplasma volcanium GSS1]
          Length = 331

 Score = 34.7 bits (78), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 52/128 (40%), Gaps = 23/128 (17%)

Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
           G+ VDV  +T GKGF+G ++R    G++     +  HR    T     P  V      AG
Sbjct: 189 GKFVDVLSVTKGKGFTGHVQRF---GVKLLPRKNRKHRRMIGTLGPWHPDWVRNTVPQAG 245

Query: 166 RMGGNRVTVKNLEVVSVDD-------------------KRGLILVKGCVPGAKKNSWILV 206
           +MG  + T+ N+ V+                       K   +L+ G VPG  K   I +
Sbjct: 246 QMGYQQRTISNVRVLKYSKGEDADTINVRGGFLHYGLVKNDYVLLFGSVPGPAKR-LIKM 304

Query: 207 RDSFKSAV 214
           RD  +  V
Sbjct: 305 RDPARQKV 312


>gi|300521620|gb|ADK26021.1| r-protein L3p [Candidatus Nitrososphaera gargensis]
          Length = 332

 Score = 34.7 bits (78), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 51/119 (42%), Gaps = 24/119 (20%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           F VGQ +DV G+T GKG  G + R  FG  R  H    S R+ G+ G    P  V     
Sbjct: 190 FQVGQNIDVFGITRGKGIEGPVTR--FGIKRKQHKSRKSVRAVGTLGP-ISPAVVMYTVA 246

Query: 163 MAGRMGGNRVTVKN--LEVVSVDDKRG-------------------LILVKGCVPGAKK 200
             G+ G ++ T  N  + V+S  +K G                    I+V+G VPG  K
Sbjct: 247 RQGQRGFHQRTEYNKRILVMSNTEKDGQNSINPSGGFKHFGLVKGDYIIVRGSVPGVPK 305


>gi|156937755|ref|YP_001435551.1| 50S ribosomal protein L3P [Ignicoccus hospitalis KIN4/I]
 gi|156566739|gb|ABU82144.1| LSU ribosomal protein L3P [Ignicoccus hospitalis KIN4/I]
          Length = 358

 Score = 34.7 bits (78), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 40/93 (43%), Gaps = 7/93 (7%)

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGS--TGCRQDPGRVFKN 160
              G+ VDV G+T GKGF G +KR     L   H     HR  GS   G R         
Sbjct: 214 IEAGKFVDVIGVTKGKGFQGVIKRFGVKELPKWH----KHRK-GSRRVGARSWGKGTSSY 268

Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKG 193
               G+MG +R T  N  V+ + D    I V+G
Sbjct: 269 VPQPGQMGYHRRTDYNKRVLMISDDPSKINVEG 301


Searching..................................................done


Results from round 2




>gi|85709057|ref|ZP_01040123.1| 50S ribosomal protein L3 [Erythrobacter sp. NAP1]
 gi|85690591|gb|EAQ30594.1| 50S ribosomal protein L3 [Erythrobacter sp. NAP1]
          Length = 273

 Score =  288 bits (739), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 132/211 (62%), Positives = 162/211 (76%), Gaps = 1/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR +PVTVL L++CQVV HRT D +GY AVQ+GAGEAK KN
Sbjct: 1   MRTGVIAKKVGMTRLFQEDGRHVPVTVLALEDCQVVSHRTADNDGYFAVQLGAGEAKQKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP R  F    V  K+++ EFRV+ ++ L+PVGS+ S  +F  GQ VD+TG T GKGF
Sbjct: 61  VAKPQREHFGKAGVGLKQRVAEFRVENEEGLVPVGSLISADHFVAGQKVDITGHTQGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR  FGGLRATHGVSISHRSHGSTG RQDPGRVFK KKMAG MG  + T  NLEVV
Sbjct: 121 AGAMKRWGFGGLRATHGVSISHRSHGSTGNRQDPGRVFKGKKMAGHMGDRQRTQMNLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RGL+ +KG VPG+ KN W+LVRD+ K
Sbjct: 181 RTDADRGLLFIKGSVPGS-KNGWLLVRDAIK 210


>gi|254780261|ref|YP_003064674.1| 50S ribosomal protein L3 [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254039938|gb|ACT56734.1| 50S ribosomal protein L3 [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 221

 Score =  288 bits (738), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 221/221 (100%), Positives = 221/221 (100%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN
Sbjct: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF
Sbjct: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV
Sbjct: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
           SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS
Sbjct: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221


>gi|149184311|ref|ZP_01862629.1| 50S ribosomal protein L3 [Erythrobacter sp. SD-21]
 gi|148831631|gb|EDL50064.1| 50S ribosomal protein L3 [Erythrobacter sp. SD-21]
          Length = 285

 Score =  287 bits (734), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 131/211 (62%), Positives = 161/211 (76%), Gaps = 1/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR +PVTVL L++CQV  HRT D++GY  VQVG+GEAK KN
Sbjct: 1   MRTGVIAKKVGMTRLFQEDGRHVPVTVLSLEDCQVTAHRTEDRDGYYGVQVGSGEAKQKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP R  F+   V+ K K+ EFRV  ++ LLPVG+  S  +F  GQ VD+TG T GKGF
Sbjct: 61  VNKPQREAFAKAEVALKMKVGEFRVDSEEALLPVGARISAEHFVAGQKVDITGHTQGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR  FGGLRATHGVSISHRSHGSTG RQDPGRVFK KKMAG MG  + T +NLE+V
Sbjct: 121 AGAMKRWGFGGLRATHGVSISHRSHGSTGNRQDPGRVFKGKKMAGHMGDRQRTQQNLEIV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D  RGL+ VKG VPGA KN W++VRD+ K
Sbjct: 181 RTDADRGLLFVKGSVPGA-KNGWLMVRDAVK 210


>gi|85374465|ref|YP_458527.1| 50S ribosomal protein L3 [Erythrobacter litoralis HTCC2594]
 gi|123293706|sp|Q2N9B1|RL3_ERYLH RecName: Full=50S ribosomal protein L3
 gi|84787548|gb|ABC63730.1| ribosomal protein L3 [Erythrobacter litoralis HTCC2594]
          Length = 289

 Score =  285 bits (731), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 132/215 (61%), Positives = 163/215 (75%), Gaps = 1/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR +PVTVL L++CQVV  RT +++GY A+QVG+G AK KN
Sbjct: 1   MRTGVIAKKVGMTRLFQEDGRHVPVTVLALEDCQVVSQRTQERDGYFALQVGSGVAKQKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP R  F+   V  K K+ EFRV+ +D LLPVG+  S  +F  GQ VD+TG T GKGF
Sbjct: 61  VAKPQREAFAKAEVGLKMKVAEFRVEGEDGLLPVGAAISAEHFIAGQKVDITGYTQGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR  FGGLRATHGVSISHRSHGSTG RQDPGRVFK KKMAG MG  + T +NLEVV
Sbjct: 121 AGAMKRWGFGGLRATHGVSISHRSHGSTGNRQDPGRVFKGKKMAGHMGDRQRTQQNLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D +RGLI VKG VPG  KNSW+L+RD+ K  + 
Sbjct: 181 RTDPERGLIFVKGSVPG-TKNSWMLIRDAVKLPLP 214


>gi|295109477|emb|CBL23430.1| 50S ribosomal protein L3, bacterial [Ruminococcus obeum A2-162]
          Length = 210

 Score =  285 bits (730), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 126/212 (59%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G+ IPVTVL    C V   +T + +GY AVQVG GE + K 
Sbjct: 1   MKKAILATKVGMTQIFNEDGQLIPVTVLQAGPCVVTQVKTEENDGYAAVQVGYGEIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G F    V+ ++ + EFR +   +   VG       F  G  +D T ++ GKGF
Sbjct: 61  VNKPEKGHFDKAGVAAQRFVKEFRFENAAE-YTVGQEIKADIFADGDHIDATAISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G   DP +VFK K M G MG  +VTV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKHMPGHMGNVQVTVQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  L+LVKG VPG KK S + ++++ KS
Sbjct: 179 RVDTENNLLLVKGAVPGPKK-SLVTIKETVKS 209


>gi|253580619|ref|ZP_04857883.1| 50S ribosomal protein L3 [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847990|gb|EES75956.1| 50S ribosomal protein L3 [Ruminococcus sp. 5_1_39BFAA]
          Length = 210

 Score =  285 bits (729), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 90/212 (42%), Positives = 124/212 (58%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G+ IPVTVL    C V   +T + +GY AVQVG G+ +   
Sbjct: 1   MKKAILATKVGMTQIFNEDGQLIPVTVLQAGPCVVTQVKTEENDGYEAVQVGFGDIRESL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G F    V+ K+ + EFR     +   VG       F  G  +D T ++ GKGF
Sbjct: 61  VNKPEKGHFDKAGVAVKRFVKEFRFDNAAE-YTVGQEIKADIFADGDHIDATAVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G   DP +VFK K M G MG  +VTV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKHMPGHMGNVQVTVQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  L+LVKG VPG KK S + ++++ KS
Sbjct: 179 RVDTENNLLLVKGAVPGPKK-SLVTIKETVKS 209


>gi|296282582|ref|ZP_06860580.1| 50S ribosomal protein L3 [Citromicrobium bathyomarinum JL354]
          Length = 278

 Score =  284 bits (728), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 131/219 (59%), Positives = 163/219 (74%), Gaps = 1/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR +PVTVL L+ CQV  +RT D++GY +VQVG+GEAK KN
Sbjct: 1   MRTGVIAKKVGMTRLFQEDGRHVPVTVLALEGCQVTANRTADRDGYWSVQVGSGEAKQKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP R  F+   V  K K+ EFRV+ +D LLPVG+  +  +F  GQ VDV G T GKGF
Sbjct: 61  VNKPQREAFAKAEVGLKMKVAEFRVEGEDALLPVGATITADHFIAGQKVDVQGYTQGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR  FGGLRATHGVS+SHRSHGSTG RQDPGRVFKNKKMAG MG  + T +NLE+V
Sbjct: 121 AGAMKRWGFGGLRATHGVSLSHRSHGSTGNRQDPGRVFKNKKMAGHMGDRQRTQQNLEIV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
             D +RGL+ VKG VPGA KNSW+LV D+ K  +     
Sbjct: 181 RTDSERGLLFVKGSVPGA-KNSWMLVADAVKLPMPADAP 218


>gi|119947126|ref|YP_944806.1| ribosomal protein L3 [Psychromonas ingrahamii 37]
 gi|166233184|sp|A1T0E2|RL3_PSYIN RecName: Full=50S ribosomal protein L3
 gi|119865730|gb|ABM05207.1| LSU ribosomal protein L3P [Psychromonas ingrahamii 37]
          Length = 212

 Score =  284 bits (727), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 102/213 (47%), Positives = 132/213 (61%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  +G  IPVTVL     +V   +TLD +GY A+QV AG  K   
Sbjct: 1   MTIGLIGRKVGMTRVFTEDGVSIPVTVLECSPNRVTQVKTLDTDGYQALQVTAGSKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP  G F+   V   + L+EF +   +   + VG+  S   F     VDVTG + GKG
Sbjct: 61  VNKPEAGHFAKAGVEAGRGLWEFTLADNEGADIKVGAELSVELFNEINKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F GA+KR NF    ATHG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLEV
Sbjct: 121 FQGAIKRWNFSMQDATHGNSVSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LVKG V GA KN  ++++ + K+
Sbjct: 181 VRVDIERNLLLVKGAVAGA-KNGDVIIKPAVKA 212


>gi|87199270|ref|YP_496527.1| 50S ribosomal protein L3 [Novosphingobium aromaticivorans DSM
           12444]
 gi|109893532|sp|Q2G8Y0|RL3_NOVAD RecName: Full=50S ribosomal protein L3
 gi|87134951|gb|ABD25693.1| LSU ribosomal protein L3P [Novosphingobium aromaticivorans DSM
           12444]
          Length = 251

 Score =  282 bits (723), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 134/219 (61%), Positives = 168/219 (76%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR +PVTVL L+NCQVV  RT +++GY+A+Q+GAGEAK KN
Sbjct: 1   MRTGVIAKKVGMTRLFQEDGRHVPVTVLSLENCQVVSVRTAERDGYVALQLGAGEAKQKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP R  F+   V  K ++ EFRV  DD LL VGS  + S+F  GQ VD+TG T GKGF
Sbjct: 61  VAKPQREHFAKAEVPLKMEVAEFRV-ADDALLDVGSTIAASHFVPGQYVDITGQTQGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GAMKR  FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG  + T +NLEVV
Sbjct: 120 QGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRQRTQQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
             DD+RGLI VKG VPG+ KN+W+LVRD+ K + + +  
Sbjct: 180 RTDDERGLIFVKGSVPGS-KNAWLLVRDAVKVSRHAEAP 217


>gi|254418121|ref|ZP_05031845.1| ribosomal protein L3 [Brevundimonas sp. BAL3]
 gi|196184298|gb|EDX79274.1| ribosomal protein L3 [Brevundimonas sp. BAL3]
          Length = 249

 Score =  282 bits (723), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 126/219 (57%), Positives = 153/219 (69%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+KLGMT V+  +G  +PVTVL LD CQVV  RT +++GY+A+Q+GAG  K KN
Sbjct: 1   MRTGVIAKKLGMTRVFADDGAHVPVTVLQLDGCQVVGQRTQERDGYVALQLGAGTKKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +K  R  F+   V PK  + EFRV  +  LL VG+  S  +F VGQ VD+ G TIGKGF
Sbjct: 61  TNKAQRETFAKAEVEPKAYVTEFRVDAE-GLLDVGAELSAEHFVVGQKVDIQGETIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F  KKMAG  G   VT +NL VV
Sbjct: 120 AGAMKRWNFGGLRATHGVSLSHRSHGSTGNRQDPGRTFPGKKMAGHYGAETVTTQNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            VD +RGLIL+KG VPG    S++ VRD+ K A      
Sbjct: 180 RVDAERGLILIKGAVPG-HDGSYVKVRDAIKKARPADAP 217


>gi|220930965|ref|YP_002507873.1| ribosomal protein L3 [Halothermothrix orenii H 168]
 gi|254803676|sp|B8D0C4|RL3_HALOH RecName: Full=50S ribosomal protein L3
 gi|219992275|gb|ACL68878.1| ribosomal protein L3 [Halothermothrix orenii H 168]
          Length = 211

 Score =  282 bits (722), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 92/216 (42%), Positives = 133/216 (61%), Gaps = 5/216 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT +++ +G  IPVTV+    C V+  +  +++GY A+QVG  +     
Sbjct: 1   MAKGIIGKKLGMTQIFDDDGNVIPVTVVQAGPCVVIQKKVEERDGYNALQVGFEDVPEHR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F    V PKK + EF    +D  L  G   +   F  G+LVDVTG++ GKGF
Sbjct: 61  VNKPLKGHFERAGVKPKKHVKEFMDFPED--LNEGDEITVDIFEEGELVDVTGISKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF     +HG S  HR+ GS G   D  RVFK +K+ GRMG +RVT++NLEVV
Sbjct: 119 AGTIKRWNFSRGPMSHG-SRFHRAPGSIGAV-DASRVFKGQKLPGRMGHDRVTIQNLEVV 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            VD ++ L+L+KG VPG  K   + +R++ K A N 
Sbjct: 177 RVDSEKNLLLIKGSVPGPNKG-ILTIREAVKKASNA 211


>gi|153812865|ref|ZP_01965533.1| hypothetical protein RUMOBE_03272 [Ruminococcus obeum ATCC 29174]
 gi|149831077|gb|EDM86166.1| hypothetical protein RUMOBE_03272 [Ruminococcus obeum ATCC 29174]
          Length = 210

 Score =  282 bits (721), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 93/212 (43%), Positives = 127/212 (59%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G+ IPVTVL    C V   +T + +GY AVQVG GE + K 
Sbjct: 1   MKKAILATKVGMTQIFNEDGQLIPVTVLQAGPCVVTQVKTEENDGYAAVQVGYGEIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G F    V+ K+ + EFR +   +   VG       F  G  +DVT ++ GKGF
Sbjct: 61  VNKPEKGHFDKAGVAAKRFVKEFRFENAAE-YTVGQEIKTDIFADGDHIDVTAVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G   DP +VFK K M G MG  +VTV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKHMPGHMGNVQVTVQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  L+LVKG VPG KK S + ++++ KS
Sbjct: 179 RVDTENNLLLVKGAVPGPKK-SLVTIKETVKS 209


>gi|225574700|ref|ZP_03783310.1| hypothetical protein RUMHYD_02777 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038090|gb|EEG48336.1| hypothetical protein RUMHYD_02777 [Blautia hydrogenotrophica DSM
           10507]
          Length = 224

 Score =  281 bits (719), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 88/212 (41%), Positives = 126/212 (59%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G  IPVTVL    C V   +T + +GY AVQVG  + +   
Sbjct: 15  MKKAILATKVGMTQIFNEDGVLIPVTVLQAGPCVVTQVKTEENDGYSAVQVGYADKRENL 74

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+G F    VS K+ + EF++    +   +G       F  G  +D T ++ GKG+
Sbjct: 75  VNKPMKGHFEKAGVSCKRFVKEFKLDNAAE-YELGQEIKVDVFEAGDHIDATAISKGKGY 133

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G   DP +VFK KKM G+MG  ++T++NLEVV
Sbjct: 134 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGAASDPSKVFKGKKMPGQMGNKQITIQNLEVV 192

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  L+LVKG VPG KK S + ++++ KS
Sbjct: 193 RVDAENNLLLVKGAVPGPKK-SLVTIKETVKS 223


>gi|84685437|ref|ZP_01013335.1| 50S ribosomal protein L3 [Maritimibacter alkaliphilus HTCC2654]
 gi|84666594|gb|EAQ13066.1| 50S ribosomal protein L3 [Rhodobacterales bacterium HTCC2654]
          Length = 290

 Score =  281 bits (719), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 127/215 (59%), Positives = 164/215 (76%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT ++  +G+++PVTVL LD  QVV  RT +K+GY AVQ+GAG AK K 
Sbjct: 2   MRSGVIAKKVGMTRLFLEDGKQVPVTVLQLDGLQVVAQRTTEKDGYTAVQLGAGSAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F++ NV+PK+K+ EFRV  + +L+ VG   +  ++  GQ VDV+G +IGKGF
Sbjct: 62  TSKAMRGHFATANVAPKRKVAEFRVDAE-NLINVGEEITADHYFAGQFVDVSGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPGRVFK KKMAG MG  RVT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGRVFKGKKMAGHMGAARVTTQNLQVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D +RGLI++KG VPG+ K  W+ ++D+ K    
Sbjct: 181 KTDSERGLIMIKGAVPGS-KGGWVTIKDAVKKPFP 214


>gi|89076770|ref|ZP_01163043.1| 50S ribosomal protein L3 [Photobacterium sp. SKA34]
 gi|90581758|ref|ZP_01237542.1| 50S ribosomal protein L3 [Vibrio angustum S14]
 gi|89047583|gb|EAR53197.1| 50S ribosomal protein L3 [Photobacterium sp. SKA34]
 gi|90437056|gb|EAS62263.1| 50S ribosomal protein L3 [Vibrio angustum S14]
          Length = 209

 Score =  280 bits (718), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 94/210 (44%), Positives = 136/210 (64%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT ++  +G  IPVTV+ ++N +V   ++++ +GY A+QV AG  K   VS
Sbjct: 2   IGLIGRKVGMTRIFTEDGISIPVTVVEVENNRVTQVKSVETDGYNAIQVTAGTKKASRVS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLENSEEF-AVGAELNVELFNDIKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPG+   + ++V+ + K+
Sbjct: 181 DAERNLLLIKGAVPGSTGGN-VIVKPAVKA 209


>gi|260432429|ref|ZP_05786400.1| 50S ribosomal protein L3 [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416257|gb|EEX09516.1| 50S ribosomal protein L3 [Silicibacter lacuscaerulensis ITI-1157]
          Length = 242

 Score =  280 bits (718), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 134/215 (62%), Positives = 164/215 (76%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  +GR+IPVTVLHLDN QVV  RT DK+GY AVQ+GAG AK K 
Sbjct: 2   MRSGIIAKKVGMTRLFMEDGRQIPVTVLHLDNLQVVAQRTADKDGYTAVQLGAGAAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F++  V PK+KL EFRV +D  L+ VG+  S  +F  GQ VDV+G +IGKGF
Sbjct: 62  TSKAMRGHFAAAKVEPKRKLAEFRVSED-ALIEVGAEISADHFVEGQKVDVSGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D +RGL+ +KG VPG  K+ W+ V+D+ K    
Sbjct: 181 KTDAERGLVFIKGAVPGP-KSGWVTVKDAVKKKAP 214


>gi|149192608|ref|ZP_01870762.1| 50S ribosomal protein L3 [Vibrio shilonii AK1]
 gi|148833557|gb|EDL50640.1| 50S ribosomal protein L3 [Vibrio shilonii AK1]
          Length = 209

 Score =  280 bits (718), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 101/210 (48%), Positives = 136/210 (64%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V RK+GMT ++  EG  IPVTV+ ++  +V   RTLD +GY A+QV AGE K   VS
Sbjct: 2   IGLVGRKVGMTRIFTEEGVSIPVTVVEVEANRVTQVRTLDTDGYAAIQVTAGEKKASRVS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELNVELFNDVKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 AVKRWNFATQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAIKA 209


>gi|260770913|ref|ZP_05879842.1| LSU ribosomal protein L3p (L3e) [Vibrio furnissii CIP 102972]
 gi|260614150|gb|EEX39340.1| LSU ribosomal protein L3p (L3e) [Vibrio furnissii CIP 102972]
 gi|315178959|gb|ADT85873.1| 50S ribosomal protein L3 [Vibrio furnissii NCTC 11218]
          Length = 209

 Score =  280 bits (717), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 96/210 (45%), Positives = 134/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY A+QV AG  K   V+
Sbjct: 2   IGLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F+   V   + L+EFR++  ++   VGS  +   F   + VDVTG + GKGF G
Sbjct: 62  KAEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGSELTVELFNETKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|258625740|ref|ZP_05720619.1| 50S ribosomal protein L3 [Vibrio mimicus VM603]
 gi|258581978|gb|EEW06848.1| 50S ribosomal protein L3 [Vibrio mimicus VM603]
          Length = 209

 Score =  280 bits (717), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 97/210 (46%), Positives = 136/210 (64%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY A+QV AG  K   V+
Sbjct: 2   IGLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR++  ++   VGS  +   F+  + VDVTG + GKGF G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFSEVKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|89070557|ref|ZP_01157846.1| 50S ribosomal protein L3 [Oceanicola granulosus HTCC2516]
 gi|89043864|gb|EAR50062.1| 50S ribosomal protein L3 [Oceanicola granulosus HTCC2516]
          Length = 292

 Score =  280 bits (716), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 127/213 (59%), Positives = 161/213 (75%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSG++A+K+GMT ++  +G++IPVTVL LD  QVV  RT++ +GY AVQ+GAG AK K 
Sbjct: 2   LRSGIIAKKVGMTRIFQEDGKQIPVTVLQLDKLQVVAKRTVETDGYSAVQLGAGIAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S PMRG F+  NV PK+K+ EFRV   ++L+ VG   +  ++  GQ VDV+G +IGKGF
Sbjct: 62  TSAPMRGHFAKANVEPKRKIAEFRV-AAENLIEVGEEITADHYFEGQYVDVSGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             D  RGLI+VKG VPG+ K  W+ V+D+ K  
Sbjct: 181 RTDADRGLIMVKGAVPGS-KGGWVTVKDAVKKP 212


>gi|261211151|ref|ZP_05925440.1| LSU ribosomal protein L3p (L3e) [Vibrio sp. RC341]
 gi|262166617|ref|ZP_06034354.1| LSU ribosomal protein L3p (L3e) [Vibrio mimicus VM223]
 gi|262170467|ref|ZP_06038145.1| LSU ribosomal protein L3p (L3e) [Vibrio mimicus MB-451]
 gi|262401883|ref|ZP_06078448.1| LSU ribosomal protein L3p (L3e) [Vibrio sp. RC586]
 gi|260839652|gb|EEX66263.1| LSU ribosomal protein L3p (L3e) [Vibrio sp. RC341]
 gi|261891543|gb|EEY37529.1| LSU ribosomal protein L3p (L3e) [Vibrio mimicus MB-451]
 gi|262026333|gb|EEY45001.1| LSU ribosomal protein L3p (L3e) [Vibrio mimicus VM223]
 gi|262351855|gb|EEZ00986.1| LSU ribosomal protein L3p (L3e) [Vibrio sp. RC586]
          Length = 209

 Score =  280 bits (716), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 97/210 (46%), Positives = 135/210 (64%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY A+QV AG  K   V+
Sbjct: 2   IGLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR++  ++   VGS  +   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|163796919|ref|ZP_02190876.1| Ribosomal protein L3 [alpha proteobacterium BAL199]
 gi|159177908|gb|EDP62457.1| Ribosomal protein L3 [alpha proteobacterium BAL199]
          Length = 249

 Score =  280 bits (716), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 130/215 (60%), Positives = 161/215 (74%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT V+  EG  +PVTVL +D CQVV  RT DK+GY AVQ+G G  K K+
Sbjct: 1   MRSGMIAQKVGMTRVFTDEGTHVPVTVLKVDGCQVVSVRTQDKDGYTAVQLGVGVRKPKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KPMRG F+   V PK+KL EFRV +D  LL VG+  S  +F  GQ VDVTG +IGKGF
Sbjct: 61  TTKPMRGHFAKAGVEPKRKLVEFRVTED-ALLDVGAELSVEHFVAGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNF GLRA+HGVS+SHRSHGSTG  QDPGRV+K KKMAG MG  RVT +NL +V
Sbjct: 120 AGAMKRHNFSGLRASHGVSLSHRSHGSTGNNQDPGRVWKGKKMAGHMGDVRVTTQNLVIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           S D +RGLILV+G VPG+    W+L+ D+ K+ + 
Sbjct: 180 STDAERGLILVRGAVPGSD-GGWVLLSDAVKAKLP 213


>gi|260779503|ref|ZP_05888393.1| LSU ribosomal protein L3p (L3e) [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260604312|gb|EEX30616.1| LSU ribosomal protein L3p (L3e) [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 209

 Score =  279 bits (715), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 98/210 (46%), Positives = 134/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT V+  EG  IPVTV+ ++  +V   RTL+ +GY A+QV  G  K   VS
Sbjct: 2   IGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVRTLETDGYAAIQVTTGAKKANRVS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELTVELFNETKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 AVKRWNFSTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|15642591|ref|NP_232224.1| 50S ribosomal protein L3 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|147673700|ref|YP_001218090.1| 50S ribosomal protein L3 [Vibrio cholerae O395]
 gi|153827414|ref|ZP_01980081.1| ribosomal protein L3 [Vibrio cholerae MZO-2]
 gi|153831409|ref|ZP_01984076.1| ribosomal protein L3 [Vibrio cholerae 623-39]
 gi|227082713|ref|YP_002811264.1| ribosomal protein L3 [Vibrio cholerae M66-2]
 gi|229507352|ref|ZP_04396857.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae BX 330286]
 gi|229509725|ref|ZP_04399206.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae B33]
 gi|229513519|ref|ZP_04402983.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae TMA 21]
 gi|229516849|ref|ZP_04406295.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae RC9]
 gi|229521662|ref|ZP_04411080.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae TM 11079-80]
 gi|229524577|ref|ZP_04413982.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae bv. albensis
           VL426]
 gi|229527474|ref|ZP_04416866.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae 12129(1)]
 gi|229606858|ref|YP_002877506.1| 50S ribosomal protein L3 [Vibrio cholerae MJ-1236]
 gi|254292178|ref|ZP_04962948.1| ribosomal protein L3 [Vibrio cholerae AM-19226]
 gi|254851136|ref|ZP_05240486.1| ribosomal protein L3 [Vibrio cholerae MO10]
 gi|255744435|ref|ZP_05418387.1| LSU ribosomal protein L3p (L3e) [Vibrio cholera CIRS 101]
 gi|262170153|ref|ZP_06037842.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae RC27]
 gi|42559699|sp|Q9KNY4|RL3_VIBCH RecName: Full=50S ribosomal protein L3
 gi|172047551|sp|A5F549|RL3_VIBC3 RecName: Full=50S ribosomal protein L3
 gi|254803701|sp|C3LRQ8|RL3_VIBCM RecName: Full=50S ribosomal protein L3
 gi|9657183|gb|AAF95737.1| ribosomal protein L3 [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|146315583|gb|ABQ20122.1| ribosomal protein L3 [Vibrio cholerae O395]
 gi|148873110|gb|EDL71245.1| ribosomal protein L3 [Vibrio cholerae 623-39]
 gi|149738687|gb|EDM53029.1| ribosomal protein L3 [Vibrio cholerae MZO-2]
 gi|150421907|gb|EDN13884.1| ribosomal protein L3 [Vibrio cholerae AM-19226]
 gi|227010601|gb|ACP06813.1| ribosomal protein L3 [Vibrio cholerae M66-2]
 gi|227014485|gb|ACP10695.1| ribosomal protein L3 [Vibrio cholerae O395]
 gi|229335106|gb|EEO00591.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae 12129(1)]
 gi|229338158|gb|EEO03175.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae bv. albensis
           VL426]
 gi|229341256|gb|EEO06260.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae TM 11079-80]
 gi|229345912|gb|EEO10884.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae RC9]
 gi|229349396|gb|EEO14352.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae TMA 21]
 gi|229353199|gb|EEO18138.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae B33]
 gi|229354857|gb|EEO19778.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae BX 330286]
 gi|229369513|gb|ACQ59936.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae MJ-1236]
 gi|254846841|gb|EET25255.1| ribosomal protein L3 [Vibrio cholerae MO10]
 gi|255737960|gb|EET93353.1| LSU ribosomal protein L3p (L3e) [Vibrio cholera CIRS 101]
 gi|262021561|gb|EEY40273.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae RC27]
 gi|327485078|gb|AEA79485.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae LMA3894-4]
          Length = 209

 Score =  279 bits (715), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 96/210 (45%), Positives = 134/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   V+
Sbjct: 2   IGLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGSKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR++  ++   VGS  +   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|88860959|ref|ZP_01135595.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas tunicata D2]
 gi|88817172|gb|EAR26991.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas tunicata D2]
          Length = 211

 Score =  279 bits (714), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 97/212 (45%), Positives = 129/212 (60%), Gaps = 1/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+     ++   +T   +GY A+QV AG  K   
Sbjct: 1   MALGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRIAQIKTDANDGYNALQVTAGTKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+   V   + L+EFR+  D+    VGS  +   F     VDVTG + GKGF
Sbjct: 61  VNKAQAGHFAKAGVEAGRGLWEFRLSGDEGSFEVGSEITVELFNDVTKVDVTGTSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 121 QGGVKRWNFRTQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGHMGAERVTTQNLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPG+  N  ++V+ + K+
Sbjct: 181 RVDVERNLLLVKGAVPGSI-NGDVIVKPAVKA 211


>gi|91229293|ref|ZP_01262910.1| 50S ribosomal protein L3 [Vibrio alginolyticus 12G01]
 gi|262392516|ref|YP_003284370.1| 50S ribosomal protein L3p [Vibrio sp. Ex25]
 gi|269964734|ref|ZP_06178972.1| 50S ribosomal protein L3 [Vibrio alginolyticus 40B]
 gi|91187418|gb|EAS73766.1| 50S ribosomal protein L3 [Vibrio alginolyticus 12G01]
 gi|262336110|gb|ACY49905.1| LSU ribosomal protein L3p (L3e) [Vibrio sp. Ex25]
 gi|269830633|gb|EEZ84854.1| 50S ribosomal protein L3 [Vibrio alginolyticus 40B]
          Length = 209

 Score =  279 bits (714), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 97/210 (46%), Positives = 134/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT V+  EG  IPVTV+ ++  +V   +TL+ +GY A+QV AG  K   V+
Sbjct: 2   IGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F+   V   + L+EFR++  ++   VGS  +   F   + VDVTG + GKGF G
Sbjct: 62  KAEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGSELTVELFNETKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|323495504|ref|ZP_08100578.1| 50S ribosomal protein L3 [Vibrio sinaloensis DSM 21326]
 gi|323319385|gb|EGA72322.1| 50S ribosomal protein L3 [Vibrio sinaloensis DSM 21326]
          Length = 209

 Score =  279 bits (714), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 97/210 (46%), Positives = 135/210 (64%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT V+  EG  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   VS
Sbjct: 2   IGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGAKKANRVS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR++ D++   VG+  +   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLENDEEF-AVGAELTVELFNDTKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPG+   + ++V+ + K+
Sbjct: 181 DAERNLLLIKGAVPGSTGGN-VIVKPAVKA 209


>gi|330447037|ref|ZP_08310687.1| 50S ribosomal subunit protein L3 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491228|dbj|GAA05184.1| 50S ribosomal subunit protein L3 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 209

 Score =  279 bits (714), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 93/210 (44%), Positives = 134/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT ++  +G  IPVTV+ ++  +V   ++++ +GY A+QV  G  K   VS
Sbjct: 2   IGLIGRKVGMTRIFTEDGVSIPVTVVEVEANRVTQVKSVETDGYNAIQVTTGSKKANRVS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLENSEEF-AVGAELNVELFNDIKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|83858566|ref|ZP_00952088.1| 50S ribosomal protein L3 [Oceanicaulis alexandrii HTCC2633]
 gi|83853389|gb|EAP91241.1| 50S ribosomal protein L3 [Oceanicaulis alexandrii HTCC2633]
          Length = 246

 Score =  278 bits (713), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 129/212 (60%), Positives = 163/212 (76%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+KLGMT V+  +G  +PVTVLHLD  QVV  RT + +GY AVQ+GAG+AK K 
Sbjct: 1   MRTGLLAKKLGMTRVFTEDGDHVPVTVLHLDGLQVVAQRTSENDGYTAVQLGAGKAKAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+  +V PK+KL EFRV  +D L+  G+  S  +F VGQ VDV+G +IGKGF
Sbjct: 61  TSKAMRGHFAKASVEPKRKLVEFRV-PEDALIEAGAELSAEHFVVGQKVDVSGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG +G  RVT+++LE+V
Sbjct: 120 AGGMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHLGSERVTIQSLEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +RGL+LVKG VPG+ K SW+ +RD+ K 
Sbjct: 180 RVDAERGLVLVKGAVPGS-KESWVEIRDAVKG 210


>gi|163739437|ref|ZP_02146847.1| 50S ribosomal protein L3 [Phaeobacter gallaeciensis BS107]
 gi|163740231|ref|ZP_02147625.1| 50S ribosomal protein L3 [Phaeobacter gallaeciensis 2.10]
 gi|161386089|gb|EDQ10464.1| 50S ribosomal protein L3 [Phaeobacter gallaeciensis 2.10]
 gi|161387190|gb|EDQ11549.1| 50S ribosomal protein L3 [Phaeobacter gallaeciensis BS107]
          Length = 237

 Score =  278 bits (713), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 131/215 (60%), Positives = 161/215 (74%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  +G+++PVTVL LD  QV   RT +K+GY AVQ+GAG AKVK 
Sbjct: 1   MRSGIIAKKVGMTRLFLEDGKQVPVTVLQLDGLQVTAQRTEEKDGYTAVQLGAGSAKVKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK MRG F++  V PK+KL EFRV   D L+ VG+  S  +F  GQ VDVTG +IGKGF
Sbjct: 61  VSKAMRGHFAAAKVEPKRKLVEFRV-PADALIEVGAEISAEHFLEGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D  RGLI++KG VPG+ K  W+ V+D+ K    
Sbjct: 180 KTDADRGLIMIKGAVPGS-KGGWVTVKDAVKKKAP 213


>gi|28897031|ref|NP_796636.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus RIMD 2210633]
 gi|153840341|ref|ZP_01993008.1| ribosomal protein L3 [Vibrio parahaemolyticus AQ3810]
 gi|260877949|ref|ZP_05890304.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus AN-5034]
 gi|260897591|ref|ZP_05906087.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus Peru-466]
 gi|260899521|ref|ZP_05907916.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus AQ4037]
 gi|42559620|sp|Q87T13|RL3_VIBPA RecName: Full=50S ribosomal protein L3
 gi|28805239|dbj|BAC58520.1| ribosomal protein L3 [Vibrio parahaemolyticus RIMD 2210633]
 gi|149745999|gb|EDM57129.1| ribosomal protein L3 [Vibrio parahaemolyticus AQ3810]
 gi|308087536|gb|EFO37231.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus Peru-466]
 gi|308089929|gb|EFO39624.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus AN-5034]
 gi|308108784|gb|EFO46324.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus AQ4037]
 gi|328471834|gb|EGF42711.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus 10329]
          Length = 209

 Score =  278 bits (713), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 96/210 (45%), Positives = 134/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT V+  EG  IPVTV+ ++  +V   +TL+ +GY A+QV AG  K   V+
Sbjct: 2   IGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF G
Sbjct: 62  KAEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELTVELFNETKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|192360421|ref|YP_001981208.1| 50S ribosomal protein L3 [Cellvibrio japonicus Ueda107]
 gi|226725144|sp|B3PK37|RL3_CELJU RecName: Full=50S ribosomal protein L3
 gi|190686586|gb|ACE84264.1| ribosomal protein L3 [Cellvibrio japonicus Ueda107]
          Length = 214

 Score =  278 bits (713), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 100/216 (46%), Positives = 134/216 (62%), Gaps = 2/216 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT V+  +G  IPVTV+ ++  +V   +T D +GY AVQ+  GE +   
Sbjct: 1   MTIGIVGRKTGMTRVFTDDGVSIPVTVIEVEPNRVTQVKTADTDGYSAVQITVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+  NV   + ++E R     +   VG+  +   F+ GQ +DVTG + GKG+
Sbjct: 61  VTKSEAGHFAKANVEAGRSVWELR-NNSQEAFEVGASLTVEAFSAGQFIDVTGTSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NFG   ATHG S SHR  GSTG  Q PGRVFKNKKM G MG  RVTV+NLE+V
Sbjct: 120 AGTVKRWNFGMQDATHGNSRSHRVPGSTGQCQSPGRVFKNKKMTGHMGAERVTVQNLEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            VD +R L+LVKG +PGA     ++VR + K+  N 
Sbjct: 180 RVDAERNLLLVKGAIPGAPGGD-VIVRPAVKARTNA 214


>gi|56698636|ref|YP_169013.1| 50S ribosomal protein L3 [Ruegeria pomeroyi DSS-3]
 gi|81819888|sp|Q5LLU6|RL3_SILPO RecName: Full=50S ribosomal protein L3
 gi|56680373|gb|AAV97039.1| ribosomal protein L3 [Ruegeria pomeroyi DSS-3]
          Length = 241

 Score =  278 bits (713), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 132/215 (61%), Positives = 164/215 (76%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  +G++IPVTVL LDN QVV  RT +K+GY AVQ+GAG  K+K 
Sbjct: 1   MRSGIIAKKVGMTRLFMEDGKQIPVTVLQLDNLQVVAQRTTEKDGYTAVQLGAGTPKIKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK MRG F++  V PK+KL EFRV +D  L+ VG+  S  +F  GQ VDV+G +IGKGF
Sbjct: 61  VSKAMRGHFAAQKVEPKRKLAEFRVSED-ALIEVGAEISAEHFLTGQKVDVSGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPGRVFK KKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGRVFKGKKMAGHMGAARVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D +RGL+ +KG VPG  K+ W+ V+D+ K    
Sbjct: 180 KTDAERGLVFIKGAVPGP-KSGWVTVKDAVKKKAP 213


>gi|312793939|ref|YP_004026862.1| 50S ribosomal protein l3 [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312877365|ref|ZP_07737330.1| 50S ribosomal protein L3 [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795839|gb|EFR12203.1| 50S ribosomal protein L3 [Caldicellulosiruptor lactoaceticus 6A]
 gi|312181079|gb|ADQ41249.1| 50S ribosomal protein L3 [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 210

 Score =  278 bits (713), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 102/212 (48%), Positives = 133/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V++  GR IPVTV+    C VV  +T++K+GY A+QVG  + K   
Sbjct: 1   MTKGILGKKIGMTQVFDEAGRAIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+RG F+   V PK+ L E R+ KD D   VG       F  G+ VDVTG++  KGF
Sbjct: 61  LNKPLRGHFAKHGVKPKRFLRELRL-KDADKYEVGQEIRVDIFQPGERVDVTGISKAKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       +HG S+ HR  GS G    P R F  KKM GRMGG RVTV NL+VV
Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPG  KNS +++RDS KS
Sbjct: 179 KVDPERNLLLVKGSVPG-NKNSLLIIRDSVKS 209


>gi|312135496|ref|YP_004002834.1| 50S ribosomal protein l3 [Caldicellulosiruptor owensensis OL]
 gi|311775547|gb|ADQ05034.1| 50S ribosomal protein L3 [Caldicellulosiruptor owensensis OL]
          Length = 210

 Score =  278 bits (713), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 102/212 (48%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V++ EGR IPVTV+    C VV  +T++K+GY A+QVG  + K   
Sbjct: 1   MTKGILGKKIGMTQVFDEEGRVIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP++G F+   V PK+ L E R+ KD D   VG       F  G+ VDVTG++  KGF
Sbjct: 61  LNKPLKGHFAKHGVKPKRYLRELRL-KDADKYEVGQEIRVDIFQPGERVDVTGISKAKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       +HG S+ HR  GS G    P R F  KKM GRMGG RVTV NL+VV
Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPG  KNS +++RDS KS
Sbjct: 179 KVDPERNLLLVKGSVPG-NKNSLLIIRDSVKS 209


>gi|114764144|ref|ZP_01443382.1| 50S ribosomal protein L3 [Pelagibaca bermudensis HTCC2601]
 gi|114543296|gb|EAU46312.1| 50S ribosomal protein L3 [Roseovarius sp. HTCC2601]
          Length = 280

 Score =  278 bits (713), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 131/215 (60%), Positives = 163/215 (75%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT ++  +G+++PVTVL LD CQVV  RT DK+GY AVQ+GAG  K KN
Sbjct: 2   MRSGVIAKKVGMTRLFLEDGKQVPVTVLQLDGCQVVAQRTSDKDGYTAVQLGAGSVKAKN 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKPMRG F+   V PK+K+ EFRV  + +L+ VG   +  ++  GQ VDV+G TIGKGF
Sbjct: 62  VSKPMRGHFAIAKVEPKRKIAEFRVDAE-NLIGVGEEITADHYFEGQFVDVSGTTIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D  RGLI++KG VPG+ K  W+ ++D+ K    
Sbjct: 181 KTDASRGLIMIKGAVPGS-KGGWVTIKDAVKKPFP 214


>gi|84503642|ref|ZP_01001680.1| 50S ribosomal protein L3 [Oceanicola batsensis HTCC2597]
 gi|84387939|gb|EAQ00991.1| 50S ribosomal protein L3 [Oceanicola batsensis HTCC2597]
          Length = 290

 Score =  278 bits (712), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 125/215 (58%), Positives = 161/215 (74%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSG++A+K+GMT ++  +G+++PVTVL LD  QVV  RT + +GY AVQ+GAG AK K 
Sbjct: 2   LRSGIIAKKIGMTRLFMEDGKQVPVTVLQLDKLQVVAQRTAEAHGYTAVQLGAGTAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F++ +V PK+K+ EFRV  D +L+ VG   +  ++  GQ VDV G +IGKGF
Sbjct: 62  TSKAMRGHFAAASVEPKRKIAEFRVDPD-NLIKVGEEITADHYFEGQFVDVCGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D +RGLI++KG VPG+ K  W+ V+D+ K    
Sbjct: 181 KTDSERGLIMIKGAVPGS-KGGWVTVKDAVKKPFP 214


>gi|220935492|ref|YP_002514391.1| ribosomal protein L3 [Thioalkalivibrio sp. HL-EbGR7]
 gi|254803700|sp|B8GV58|RL3_THISH RecName: Full=50S ribosomal protein L3
 gi|219996802|gb|ACL73404.1| ribosomal protein L3 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 214

 Score =  278 bits (712), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 102/213 (47%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RKLGMT V+  +G  +PVTV+ +D  +V   +T +++GY A+QV  G  K   
Sbjct: 1   MAIGLVGRKLGMTRVFTEDGASLPVTVIEVDPNRVTQVKTEERDGYRALQVTTGARKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP  G F+   V   + L+EFR+  D    +  G+      F  GQ+VDVTG++ GKG
Sbjct: 61  VTKPRAGHFAKAGVEAGRGLWEFRLDGDQGAEIETGAELKVDIFEAGQIVDVTGISKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KRHNF    ATHG S+SHR+ GS G  Q PGRVFK KKMAG MG  R TV+NLEV
Sbjct: 121 FQGVIKRHNFSMQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHMGNERCTVQNLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+L+KG VPG+   + +LVR   K+
Sbjct: 181 VRVDVERNLLLIKGAVPGSTGGN-VLVRPGVKA 212


>gi|291547982|emb|CBL21090.1| 50S ribosomal protein L3, bacterial [Ruminococcus sp. SR1/5]
          Length = 210

 Score =  278 bits (712), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 124/212 (58%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G  IPVTVL    C V   +T + +GY +VQVG GE + K 
Sbjct: 1   MKKAILATKVGMTQIFNEDGMLIPVTVLQAGPCVVTQVKTEENDGYTSVQVGFGEIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G F    V+ K+ + EFR     +   VG       F  G  +D T ++ GKGF
Sbjct: 61  VNKPEKGHFDKAGVAVKRFVKEFRFDNAGE-YEVGQEIKADIFAAGDHIDATAVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G   DP +VFK K M G MG  +VTV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKHMPGHMGHVQVTVQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  L+LVKG VPG KK S + ++++ KS
Sbjct: 179 RVDTENNLLLVKGAVPGPKK-SLVTIKETVKS 209


>gi|315497973|ref|YP_004086777.1| 50S ribosomal protein l3 [Asticcacaulis excentricus CB 48]
 gi|315415985|gb|ADU12626.1| 50S ribosomal protein L3 [Asticcacaulis excentricus CB 48]
          Length = 243

 Score =  278 bits (712), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 124/215 (57%), Positives = 157/215 (73%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+KLGMT  ++ +G+ +PVTVL L+ CQVV  RT DK+GY A+Q+GAG  K KN
Sbjct: 1   MRTGLLAKKLGMTRYFDAQGQHVPVTVLSLEGCQVVAQRTKDKDGYTALQLGAGTRKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKP R  F+   V PK  L EFRV +D  L+ VG+ FS  +F  GQ VD+ G TIGKGF
Sbjct: 61  VSKPERERFAKAQVEPKAILSEFRVSED-ALVEVGAEFSADHFVEGQRVDIQGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGG+RATHGVS+SHR+HGSTG RQDPGR F  KKMAG  G   VT  NLEVV
Sbjct: 120 AGAMKRWNFGGMRATHGVSVSHRAHGSTGNRQDPGRTFPGKKMAGHYGVETVTTLNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            +D +RGLI ++G VPGA+  S++ +RD+ K +  
Sbjct: 180 RIDAERGLIFIRGAVPGAE-GSFVKIRDAVKKSAP 213


>gi|269104012|ref|ZP_06156709.1| LSU ribosomal protein L3p (L3e) [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163910|gb|EEZ42406.1| LSU ribosomal protein L3p (L3e) [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 209

 Score =  278 bits (712), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 92/210 (43%), Positives = 134/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT ++   G  IPVTV+ ++  +V   +T++ +GY A+Q+  G  K   V+
Sbjct: 2   IGLIGRKVGMTRIFTEAGVSIPVTVVEVEANRVSQVKTVETDGYNAIQITTGSKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR++ +++   VG+  +   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLENNEEF-AVGAELTVELFNEVKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|77462259|ref|YP_351763.1| 50S ribosomal protein L3 [Rhodobacter sphaeroides 2.4.1]
 gi|126461135|ref|YP_001042249.1| 50S ribosomal protein L3 [Rhodobacter sphaeroides ATCC 17029]
 gi|221638113|ref|YP_002524375.1| 50S ribosomal protein L3 [Rhodobacter sphaeroides KD131]
 gi|109893550|sp|Q3J5S2|RL3_RHOS4 RecName: Full=50S ribosomal protein L3
 gi|77386677|gb|ABA77862.1| LSU ribosomal protein L3P [Rhodobacter sphaeroides 2.4.1]
 gi|126102799|gb|ABN75477.1| LSU ribosomal protein L3P [Rhodobacter sphaeroides ATCC 17029]
 gi|221158894|gb|ACL99873.1| 50S ribosomal protein L3 [Rhodobacter sphaeroides KD131]
          Length = 240

 Score =  278 bits (712), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 127/217 (58%), Positives = 161/217 (74%), Gaps = 2/217 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT ++  +G+++PVTVL LD+ QVV  RT +K+GY AVQ+GAG AK K 
Sbjct: 1   MRSGVIAKKLGMTRLFLEDGKQVPVTVLQLDSLQVVAQRTTEKDGYTAVQLGAGAAKAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS   RG F+  NV PK+K+ EFRV  D  L+ VG+  +  ++  GQ VD+ G +IGKGF
Sbjct: 61  VSAAQRGHFAKANVEPKRKIAEFRVTPDC-LIDVGAEITADHYFAGQFVDIAGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NL+VV
Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
             D  RGLI+VKG VPG+ K  W+ ++D+ K     +
Sbjct: 180 RTDSDRGLIMVKGAVPGS-KGGWVTIKDAVKKPAPEQ 215


>gi|254474359|ref|ZP_05087745.1| ribosomal protein L3 [Ruegeria sp. R11]
 gi|214028602|gb|EEB69437.1| ribosomal protein L3 [Ruegeria sp. R11]
          Length = 239

 Score =  278 bits (712), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 131/215 (60%), Positives = 161/215 (74%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  +G+++PVTVL LD  QV   RT +K+GY AVQ+GAG AKVK 
Sbjct: 3   MRSGIIAKKVGMTRLFLEDGKQVPVTVLQLDGLQVTAQRTEEKDGYTAVQLGAGSAKVKR 62

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK MRG F++  V PK+KL EFRV   D L+ VG+  S  +F  GQ VDVTG +IGKGF
Sbjct: 63  VSKAMRGHFAAAKVEPKRKLVEFRV-PADGLIEVGAEISAEHFLEGQKVDVTGTSIGKGF 121

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 122 AGAMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 181

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D  RGLI++KG VPG+ K  W+ V+D+ K    
Sbjct: 182 KTDADRGLIMIKGAVPGS-KGGWVTVKDAVKKKAP 215


>gi|326388197|ref|ZP_08209800.1| 50S ribosomal protein L3 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326207363|gb|EGD58177.1| 50S ribosomal protein L3 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 241

 Score =  278 bits (711), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 132/219 (60%), Positives = 168/219 (76%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR +PVTVL L++CQVV  RT +++GY+A+Q+GAGEAK KN
Sbjct: 1   MRTGVIAKKVGMTRLFQEDGRHVPVTVLSLEDCQVVSVRTAERDGYVALQLGAGEAKQKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP R  F+   V  K ++ EFRV  DD +L VGS  + S+F +GQLVD+TG T GKGF
Sbjct: 61  VAKPQREHFAKAEVPLKAEVAEFRV-ADDAVLEVGSTIAASHFAIGQLVDITGHTQGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR  FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG  + T +NLE+V
Sbjct: 120 AGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRQRTQQNLEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
             DD RGLI VKG VPG+ KN W+LVRD+ K   + +  
Sbjct: 180 RTDDARGLIFVKGSVPGS-KNGWLLVRDAVKVNRHAEAP 217


>gi|110634030|ref|YP_674238.1| 50S ribosomal protein L3 [Mesorhizobium sp. BNC1]
 gi|122965958|sp|Q11HQ2|RL3_MESSB RecName: Full=50S ribosomal protein L3
 gi|110285014|gb|ABG63073.1| LSU ribosomal protein L3P [Chelativorans sp. BNC1]
          Length = 242

 Score =  278 bits (711), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 137/220 (62%), Positives = 168/220 (76%), Gaps = 2/220 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  IPVTVL ++NCQVV  RT +KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKIGMTRVYNETGEHIPVTVLRMENCQVVAQRTEEKNGYTAVQLGVGLAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK +RG F++ +V PK K+ EFRV  + +LL VG+  +  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSKALRGHFAAASVEPKAKVAEFRVSPE-NLLDVGAEITADHFVPGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G MKRHNFGG RATHG S+SHR+HGSTG RQDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 120 QGVMKRHNFGGGRATHGNSVSHRTHGSTGQRQDPGKVFKGKKMAGHMGDRRVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
           S D +RGLILV+G VPG+ K SWI+VRD+ K+ +  +  +
Sbjct: 180 STDTERGLILVRGAVPGS-KGSWIMVRDAVKAPLPKEAPL 218


>gi|90409445|ref|ZP_01217509.1| ribosomal protein L3 [Psychromonas sp. CNPT3]
 gi|90309447|gb|EAS37668.1| ribosomal protein L3 [Psychromonas sp. CNPT3]
          Length = 212

 Score =  278 bits (711), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 103/213 (48%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTVL     +V   +TLD +GY A+QV  G  K   
Sbjct: 1   MTIGLVGRKIGMTRIFTEDGVSIPVTVLECTPNRVTQVKTLDTDGYQAIQVTTGAKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP  G F+   V   + L+EFR+++++   + VG+  S   F     VDVTG + GKG
Sbjct: 61  VTKPEAGHFAKAGVEAGRGLWEFRLEENEGTDIKVGAELSVELFNDITKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHRS+GS G  Q PGRVFK KKM+G MG  RVT +NLEV
Sbjct: 121 FQGGIKRWNFSMQDATHGNSLSHRSNGSIGMCQTPGRVFKGKKMSGHMGAERVTTQNLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD KR L+LVKG VPGA KN  + ++ + K+
Sbjct: 181 VRVDVKRNLLLVKGAVPGA-KNGNVFIKPAVKA 212


>gi|260772096|ref|ZP_05881013.1| LSU ribosomal protein L3p (L3e) [Vibrio metschnikovii CIP 69.14]
 gi|260612963|gb|EEX38165.1| LSU ribosomal protein L3p (L3e) [Vibrio metschnikovii CIP 69.14]
          Length = 209

 Score =  278 bits (711), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 98/210 (46%), Positives = 135/210 (64%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V RK+GMT V+  EG  IPVTV+ ++  +V   +TL+ +GY A+QV AG  K   V+
Sbjct: 2   IGLVGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGTKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELTVELFNEIKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 181 DAERNLLLIKGAVPGA-TGANVIVKPAIKA 209


>gi|156973051|ref|YP_001443958.1| 50S ribosomal protein L3 [Vibrio harveyi ATCC BAA-1116]
 gi|269959691|ref|ZP_06174071.1| 50S ribosomal protein L3 [Vibrio harveyi 1DA3]
 gi|166234607|sp|A7MWI3|RL3_VIBHB RecName: Full=50S ribosomal protein L3
 gi|156524645|gb|ABU69731.1| hypothetical protein VIBHAR_00730 [Vibrio harveyi ATCC BAA-1116]
 gi|269835614|gb|EEZ89693.1| 50S ribosomal protein L3 [Vibrio harveyi 1DA3]
          Length = 209

 Score =  278 bits (711), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 94/210 (44%), Positives = 134/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY A+QV AG  K   V+
Sbjct: 2   IGLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF G
Sbjct: 62  KAEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGAELTVELFNETKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPG+   + ++V+ + K+
Sbjct: 181 DAERNLLLIKGAVPGSTGGN-VIVKPAVKA 209


>gi|222529730|ref|YP_002573612.1| 50S ribosomal protein L3 [Caldicellulosiruptor bescii DSM 6725]
 gi|254803649|sp|B9MKI1|RL3_ANATD RecName: Full=50S ribosomal protein L3
 gi|222456577|gb|ACM60839.1| ribosomal protein L3 [Caldicellulosiruptor bescii DSM 6725]
          Length = 210

 Score =  278 bits (711), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT +++  GR IPVTV+    C VV  +T++K+GY A+QVG  + K   
Sbjct: 1   MTKGILGKKIGMTQIFDEAGRAIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+RG F+   V PK+ L E R+ KD D   VG       F  G+ VDVTG++  KGF
Sbjct: 61  LNKPLRGHFAKHGVKPKRFLRELRL-KDADKYEVGQEIRVDIFQPGEKVDVTGISKAKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       +HG S+ HR  GS G    P R F  KKM GRMGG RVTV NL+VV
Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  R L+LVKG VPG  KNS +++RDS KS
Sbjct: 179 KVDPDRNLLLVKGSVPG-NKNSLLIIRDSVKS 209


>gi|312622045|ref|YP_004023658.1| 50S ribosomal protein l3 [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202512|gb|ADQ45839.1| 50S ribosomal protein L3 [Caldicellulosiruptor kronotskyensis 2002]
          Length = 210

 Score =  278 bits (711), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT +++  GR IPVTV+    C VV  +T++K+GY A+QVG  + K   
Sbjct: 1   MTKGILGKKIGMTQIFDEAGRAIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+RG F+   V PK+ L E R+ KD D   VG       F  G+ VDVTG++  KGF
Sbjct: 61  LNKPLRGHFAKHGVKPKRFLRELRL-KDADKYEVGQEIRVDIFQPGERVDVTGISKAKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       +HG S+ HR  GS G    P R F  KKM GRMGG RVTV NL+VV
Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  R L+LVKG VPG  KNS +++RDS KS
Sbjct: 179 KVDPDRNLLLVKGSVPG-NKNSLLIIRDSVKS 209


>gi|298500580|ref|ZP_07010384.1| LSU ribosomal protein L3 [Vibrio cholerae MAK 757]
 gi|297540749|gb|EFH76806.1| LSU ribosomal protein L3 [Vibrio cholerae MAK 757]
          Length = 209

 Score =  278 bits (711), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 95/208 (45%), Positives = 133/208 (63%), Gaps = 2/208 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   V+KP
Sbjct: 4   LIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGSKKANRVTKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
             G F+   V   + L+EFR++  ++   VGS  +   F   + VDVTG + GKGF GA+
Sbjct: 64  EAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQGAV 122

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD 
Sbjct: 123 KRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVDA 182

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 183 ERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|159042832|ref|YP_001531626.1| 50S ribosomal protein L3 [Dinoroseobacter shibae DFL 12]
 gi|226725165|sp|A8LM48|RL3_DINSH RecName: Full=50S ribosomal protein L3
 gi|157910592|gb|ABV92025.1| 50S ribosomal protein L3 [Dinoroseobacter shibae DFL 12]
          Length = 279

 Score =  277 bits (710), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 125/215 (58%), Positives = 163/215 (75%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT ++  +G+++PVTVL LD  QVV  RT +K+GY AVQ+GAG AK K 
Sbjct: 1   MRSGVIAKKVGMTRLFMEDGKQVPVTVLQLDKLQVVAQRTAEKDGYSAVQLGAGTAKAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +K MRG F++ +V PK+K+ EFRV  + +L+ VG   +  ++  GQ VDV+G +IGKGF
Sbjct: 61  TTKAMRGHFAAASVEPKRKVAEFRVAPE-NLINVGEEITADHYFEGQYVDVSGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NL+VV
Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D  RGLI++KG VPG+ K  W+ ++D+ K  V 
Sbjct: 180 RTDADRGLIMIKGAVPGS-KGGWVTIKDAVKKPVP 213


>gi|302871498|ref|YP_003840134.1| 50S ribosomal protein L3 [Caldicellulosiruptor obsidiansis OB47]
 gi|302574357|gb|ADL42148.1| 50S ribosomal protein L3 [Caldicellulosiruptor obsidiansis OB47]
          Length = 210

 Score =  277 bits (710), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 103/212 (48%), Positives = 133/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V++ EGR IPVTV+    C VV  +T++K+GY A+QVG  + K   
Sbjct: 1   MTKGILGKKIGMTQVFDEEGRVIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+RG F+   V PK+ L E R+ KD D   VG       F  G+ VDVTG++  KGF
Sbjct: 61  LNKPLRGHFAKHGVKPKRYLRELRL-KDADKYEVGQEIRVDIFQPGERVDVTGISKAKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       +HG S+ HR  GS G    P R F  KKM GRMGG RVTV NL+VV
Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  R L+LVKG VPG  KNS +++RDS KS
Sbjct: 179 KVDPDRNLLLVKGSVPG-NKNSLLIIRDSVKS 209


>gi|312127226|ref|YP_003992100.1| 50S ribosomal protein l3 [Caldicellulosiruptor hydrothermalis 108]
 gi|311777245|gb|ADQ06731.1| 50S ribosomal protein L3 [Caldicellulosiruptor hydrothermalis 108]
          Length = 210

 Score =  277 bits (710), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 102/212 (48%), Positives = 132/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V++  GR IPVTV+    C VV  +T++K+GY A+QVG  + K   
Sbjct: 1   MTKGILGKKIGMTQVFDEAGRAIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+RG F+   V PK+ L E R+ KD D   VG       F  G+ VDVTG++  KGF
Sbjct: 61  LNKPLRGHFAKHGVKPKRFLRELRL-KDADKYEVGQEIRVDIFQPGERVDVTGISKAKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       +HG S+ HR  GS G    P R F  KKM GRMGG RVTV NL+VV
Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  R L+LVKG VPG  KNS +++RDS KS
Sbjct: 179 KVDPDRNLLLVKGSVPG-NKNSLLIIRDSVKS 209


>gi|312884703|ref|ZP_07744404.1| 50S ribosomal protein L3 [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367616|gb|EFP95167.1| 50S ribosomal protein L3 [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 209

 Score =  277 bits (709), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 96/210 (45%), Positives = 134/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT V+  EG  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   V+
Sbjct: 2   IGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR++  ++   VGS  +   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNDTKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPG+   + ++V+ + K+
Sbjct: 181 DAERNLLLIKGAVPGSTGGN-VIVKPAVKA 209


>gi|148554274|ref|YP_001261856.1| 50S ribosomal protein L3 [Sphingomonas wittichii RW1]
 gi|148499464|gb|ABQ67718.1| LSU ribosomal protein L3P [Sphingomonas wittichii RW1]
          Length = 317

 Score =  277 bits (709), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 125/215 (58%), Positives = 156/215 (72%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR +PVTVL L+N QVV  R  D++GY+AVQ+GAG AK KN
Sbjct: 67  MRTGVIAKKMGMTRLFQEDGRHVPVTVLALENVQVVARREQDRDGYVAVQLGAGSAKPKN 126

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP RG F    V PK  + EFRV +D  LL VG+  S  ++  GQ VD+ G T GKGF
Sbjct: 127 LTKPERGHFGKAEVEPKAFVAEFRVSED-GLLDVGAEISADHYVAGQFVDIQGSTQGKGF 185

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR  FGGLRATHGVS+SHRS GSTG RQDPG+VFKNKKMAG MG    T +NLE+V
Sbjct: 186 AGGMKRWGFGGLRATHGVSVSHRSLGSTGQRQDPGKVFKNKKMAGHMGDKNRTQQNLEIV 245

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D +RGL+ VKG VPG+ K  W+LV+DS K A  
Sbjct: 246 QTDAERGLLFVKGSVPGS-KGGWLLVKDSVKIAAP 279


>gi|254506374|ref|ZP_05118516.1| ribosomal protein L3 [Vibrio parahaemolyticus 16]
 gi|219550548|gb|EED27531.1| ribosomal protein L3 [Vibrio parahaemolyticus 16]
          Length = 209

 Score =  277 bits (709), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 98/210 (46%), Positives = 135/210 (64%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT V+  EG  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   VS
Sbjct: 2   IGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGAKKANRVS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGAELTVELFNETKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF    ATHG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 AVKRWNFRTQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|209693924|ref|YP_002261852.1| 50S ribosomal protein L3 [Aliivibrio salmonicida LFI1238]
 gi|226725124|sp|B6EPS5|RL3_ALISL RecName: Full=50S ribosomal protein L3
 gi|208007875|emb|CAQ78005.1| 50S ribosomal protein L3 [Aliivibrio salmonicida LFI1238]
          Length = 209

 Score =  277 bits (709), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V RK+GMT ++  EG  IPVTV+ ++  +V   +T++ +GY A+QV  G  K   VS
Sbjct: 2   IGLVGRKVGMTRIFTEEGVSIPVTVVEVEVNRVSQVKTVETDGYNAIQVTCGSKKANRVS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR++  ++   VG+  S   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLENGEEFT-VGAELSVEIFNEIKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  R T +NLE+V V
Sbjct: 121 AIKRWNFATQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERCTTQNLEIVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPG+   + ++V+ + K+
Sbjct: 181 DAERNLLLIKGAVPGSTGGN-VIVKPAVKA 209


>gi|90415162|ref|ZP_01223111.1| 50S ribosomal protein L3 [Photobacterium profundum 3TCK]
 gi|90323709|gb|EAS40341.1| 50S ribosomal protein L3 [Photobacterium profundum 3TCK]
          Length = 209

 Score =  277 bits (709), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 93/210 (44%), Positives = 134/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT ++  EG  IPVTV+ ++  +V   ++L+ +GY A+Q+  G  K   VS
Sbjct: 2   IGLIGRKVGMTRIFTEEGISIPVTVVEVEANRVTQVKSLETDGYNAIQITTGTKKANRVS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF G
Sbjct: 62  KPAAGHFAKAGVEAGRGLWEFRLENGEEFT-VGAELNVELFNEVKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 AIKRWNFSTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPG+   + ++V+ + K+
Sbjct: 181 DAERNLLLIKGAVPGSIGGN-VIVKPAVKA 209


>gi|152998271|ref|YP_001343106.1| 50S ribosomal protein L3 [Marinomonas sp. MWYL1]
 gi|189042850|sp|A6W392|RL3_MARMS RecName: Full=50S ribosomal protein L3
 gi|150839195|gb|ABR73171.1| ribosomal protein L3 [Marinomonas sp. MWYL1]
          Length = 212

 Score =  277 bits (708), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 96/212 (45%), Positives = 135/212 (63%), Gaps = 1/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   +V RK GMT ++  +G  +PVTV+ ++  +V   +T + +GY AVQV  G  +   
Sbjct: 1   MAIQLVGRKAGMTRIFTEDGVSVPVTVIEVEPNRVTQVKTAETDGYQAVQVTVGSRRSSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G ++  NV   + L+EFR+  D+  + VG   + + F   Q+VDVTG + GKGF
Sbjct: 61  VNKAAAGHYAKANVEAGRGLWEFRLAGDEKEINVGDELTVADFESIQMVDVTGQSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRHNF    ATHG S+SHR+ GS G  Q PGRV+K KKMAG MG  +VT ++LEVV
Sbjct: 121 QGAIKRHNFSMQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGHMGAAQVTTQSLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R LILVKG VPGA  N  ++++ + K+
Sbjct: 181 RVDTERNLILVKGAVPGAV-NGDVILQSAVKA 211


>gi|84394648|ref|ZP_00993340.1| 50S ribosomal protein L3 [Vibrio splendidus 12B01]
 gi|86148881|ref|ZP_01067133.1| 50S ribosomal protein L3 [Vibrio sp. MED222]
 gi|218710749|ref|YP_002418370.1| 50S ribosomal protein L3 [Vibrio splendidus LGP32]
 gi|254803702|sp|B7VLF7|RL3_VIBSL RecName: Full=50S ribosomal protein L3
 gi|84374730|gb|EAP91685.1| 50S ribosomal protein L3 [Vibrio splendidus 12B01]
 gi|85833333|gb|EAQ51539.1| 50S ribosomal protein L3 [Vibrio sp. MED222]
 gi|218323768|emb|CAV20125.1| 50S ribosomal protein L3 [Vibrio splendidus LGP32]
          Length = 209

 Score =  277 bits (708), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 134/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V RK+GMT V+  EG  IPVTV+ ++  ++   +TL+ +GY A+QV  G  K   V+
Sbjct: 2   IGLVGRKVGMTRVFTEEGVSIPVTVVEVEANRISQVKTLETDGYAAIQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELNVELFNEIKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 AIKRWNFSTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPG+   + ++V+ + K+
Sbjct: 181 DAERNLLLIKGAVPGSTGGN-VIVKPAVKA 209


>gi|90417569|ref|ZP_01225487.1| Ribosomal protein L3 [marine gamma proteobacterium HTCC2207]
 gi|90330590|gb|EAS45886.1| Ribosomal protein L3 [marine gamma proteobacterium HTCC2207]
          Length = 211

 Score =  277 bits (708), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 94/212 (44%), Positives = 128/212 (60%), Gaps = 1/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT V+  +G  IPVTV+      V   ++++ +GY A+Q+  G  K   
Sbjct: 1   MSIGIVGRKCGMTRVFTEDGVSIPVTVVEATPNHVTQIKSVETDGYSAIQITTGSRKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK   G ++   V   +  +EFR +   D   VG   +   F  GQ+VDVTG + GKGF
Sbjct: 61  VSKAQAGHYAKAGVEAGRGQWEFRTEGSSDDFAVGGSLTVERFEAGQMVDVTGTSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG+MG  +VT +NLE+V
Sbjct: 121 QGGVKRWNFAMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNAQVTTQNLEIV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA   + + VR + K+
Sbjct: 181 RVDAERNLLLIKGAVPGAPGGNVV-VRPAVKA 211


>gi|254512299|ref|ZP_05124366.1| ribosomal protein L3 [Rhodobacteraceae bacterium KLH11]
 gi|221536010|gb|EEE38998.1| ribosomal protein L3 [Rhodobacteraceae bacterium KLH11]
          Length = 241

 Score =  277 bits (708), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 130/215 (60%), Positives = 161/215 (74%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  +G++IPVTVLHLDN QVV  RT DK+GY AVQ+GAG AK K 
Sbjct: 1   MRSGIIAKKVGMTRLFMEDGKQIPVTVLHLDNLQVVAQRTADKDGYTAVQLGAGAAKAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG +++  V PK+KL EFRV +D  L+ VG+  S  +F  GQ VDV+G +IGKGF
Sbjct: 61  TSKAMRGHYAAAKVEPKRKLAEFRVSED-GLIDVGAEISAEHFLEGQKVDVSGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D  R L+ +KG VPG  K+ W+ V+D+ K    
Sbjct: 180 KTDADRNLVFIKGAVPGP-KSGWVTVKDAVKKKAP 213


>gi|323492119|ref|ZP_08097281.1| 50S ribosomal protein L3 [Vibrio brasiliensis LMG 20546]
 gi|323313680|gb|EGA66782.1| 50S ribosomal protein L3 [Vibrio brasiliensis LMG 20546]
          Length = 209

 Score =  277 bits (708), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 96/210 (45%), Positives = 134/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT V+  EG  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   VS
Sbjct: 2   IGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGAKKANRVS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGAELTVELFNDTKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPG+   + ++V+ + K+
Sbjct: 181 DAERNLLLIKGAVPGSTGGN-VIVKPAVKA 209


>gi|88801219|ref|ZP_01116760.1| 50S ribosomal protein L3 [Reinekea sp. MED297]
 gi|88776057|gb|EAR07291.1| 50S ribosomal protein L3 [Reinekea sp. MED297]
          Length = 210

 Score =  277 bits (708), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 98/212 (46%), Positives = 128/212 (60%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK GMT V+  +G  +PVTVL ++  +V   +T+D +GY AVQ+ AG  +   
Sbjct: 1   MSIGLIGRKAGMTRVFTEDGVSVPVTVLEIEPNRVAQVKTVDTDGYAAVQLTAGNKRANK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SK   G F+  NV       EF V  D      G   +   F  GQ VDVTG + GKGF
Sbjct: 61  LSKSQAGHFAKANVEAGVLTREFPV-ADVSEYETGKELTVELFEAGQKVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GA+KRHNF    ATHG S+SHR+ GS G  Q PGRV+K KKMAG MG  R T ++LEVV
Sbjct: 120 AGAIKRHNFRTQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGHMGAERHTTQSLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  R L+L+KG VPGA   S ++V+ + K 
Sbjct: 180 RVDTDRNLLLIKGAVPGA-TGSHVVVQSAVKG 210


>gi|261250417|ref|ZP_05942992.1| LSU ribosomal protein L3p (L3e) [Vibrio orientalis CIP 102891]
 gi|260938986|gb|EEX94973.1| LSU ribosomal protein L3p (L3e) [Vibrio orientalis CIP 102891]
          Length = 209

 Score =  277 bits (708), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 98/210 (46%), Positives = 134/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT V+  EG  IPVTV+ ++  +V   +TLD +GY A+QV  G  K   VS
Sbjct: 2   IGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLDTDGYAAIQVTTGAKKANRVS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGAELTVELFNDTKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|254492312|ref|ZP_05105485.1| ribosomal protein L3 [Methylophaga thiooxidans DMS010]
 gi|224462484|gb|EEF78760.1| ribosomal protein L3 [Methylophaga thiooxydans DMS010]
          Length = 210

 Score =  276 bits (707), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 96/212 (45%), Positives = 137/212 (64%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK GMT V++ +G   PVTV+ ++  +V   +T+D +GY A+QV  GE K   
Sbjct: 1   MTIGLIGRKRGMTRVFSEDGVSTPVTVIEVEPNRVSQLKTVDTDGYNAIQVTVGERKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP  G F+    +  +K+ EFRV++    L VG+      F  GQ +DV+G+T GKGF
Sbjct: 61  VTKPEAGHFAKAQAAAGRKVAEFRVEE-VSELEVGAELKVDLFENGQQIDVSGITKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR+ F G  ATHG S+SHR+ GS G  Q PGRVFK KKMAG MG  + T++NL +V
Sbjct: 120 AGVVKRYGFRGGDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGDKKRTLQNLSIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA   S +++R + K+
Sbjct: 180 KVDAERNLLLIKGSVPGA-TGSDVIIRPAVKA 210


>gi|27364215|ref|NP_759743.1| 50S ribosomal protein L3 [Vibrio vulnificus CMCP6]
 gi|320157601|ref|YP_004189980.1| 50S ribosomal protein L3p (L3e) [Vibrio vulnificus MO6-24/O]
 gi|42559633|sp|Q8DE39|RL3_VIBVU RecName: Full=50S ribosomal protein L3
 gi|27360333|gb|AAO09270.1| LSU ribosomal protein L3p (L3e) [Vibrio vulnificus CMCP6]
 gi|319932913|gb|ADV87777.1| LSU ribosomal protein L3p (L3e) [Vibrio vulnificus MO6-24/O]
          Length = 209

 Score =  276 bits (707), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 96/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT V+  EG  IPVTV+ ++  +V   +TL+ +GY A+QV AG  K   V+
Sbjct: 2   IGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVAQVKTLETDGYAAIQVTAGTKKANRVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F+   V   + L+EFR++  ++   VGS  +   F   + VDVTG + GKGF G
Sbjct: 62  KAEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 TVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|260425273|ref|ZP_05779253.1| 50S ribosomal protein L3 [Citreicella sp. SE45]
 gi|260423213|gb|EEX16463.1| 50S ribosomal protein L3 [Citreicella sp. SE45]
          Length = 280

 Score =  276 bits (707), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 128/215 (59%), Positives = 162/215 (75%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSGV+A+K+GMT ++  +G++IPVTVL LD CQVV  RT DK+GY AVQ+GAG  K KN
Sbjct: 2   LRSGVIAKKVGMTRLFMEDGKQIPVTVLQLDGCQVVAQRTADKDGYTAVQLGAGSIKAKN 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS PMRG F+   V PK+K+ EFRV  + +L+ VG   +  ++  GQ VDV+G TIGKGF
Sbjct: 62  VSNPMRGHFAVAKVEPKRKIAEFRVDAE-NLIRVGEEITADHYFEGQFVDVSGTTIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D  RG+I++KG VPG+ K  W+ ++D+ K    
Sbjct: 181 KTDADRGIIMIKGAVPGS-KGGWVTIKDAVKKPFP 214


>gi|94500993|ref|ZP_01307518.1| 50S ribosomal protein L3 [Oceanobacter sp. RED65]
 gi|94426933|gb|EAT11916.1| 50S ribosomal protein L3 [Oceanobacter sp. RED65]
          Length = 212

 Score =  276 bits (707), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 98/212 (46%), Positives = 129/212 (60%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V +K GMT V+  +G  +PVTV+ +   +V   +T + +GY AVQV AG  K   
Sbjct: 1   MALGLVGKKAGMTRVFTEDGASVPVTVIEVTPNRVTQVKTTETDGYNAVQVTAGSRKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK   G F+  NV     L EFR+++  D   +G   +   F  GQ+VDVTG + GKGF
Sbjct: 61  VSKAEAGHFAKANVEAGDSLLEFRIEEVADF-NIGDELTVERFEAGQVVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF    ATHG S+SHR+ GS G  Q PGRV+K KKMAG MG  RVT +NLE+V
Sbjct: 120 QGGVKRWNFSTQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGHMGAARVTTQNLEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  LILVKG +PGA     I ++ + K+
Sbjct: 180 RVDAESNLILVKGALPGATGGQLI-IKPAVKA 210


>gi|20808660|ref|NP_623831.1| 50S ribosomal protein L3 [Thermoanaerobacter tengcongensis MB4]
 gi|42559656|sp|Q8R7V4|RL3_THETN RecName: Full=50S ribosomal protein L3
 gi|20517294|gb|AAM25435.1| Ribosomal protein L3 [Thermoanaerobacter tengcongensis MB4]
          Length = 210

 Score =  276 bits (707), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 99/212 (46%), Positives = 135/212 (63%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +K GMT +++ +G  IPVTV+    C VV  +T++K+GY A+QVG G+   K 
Sbjct: 1   MKKGILGKKHGMTQIFDEKGEVIPVTVIEAGPCVVVQKKTVEKDGYNAIQVGFGDVSEKK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+ G F    VSPK+ L EFR+  D     VG+      F  G  VDVTG++ GKGF
Sbjct: 61  LNKPLLGHFKKAGVSPKRYLREFRLD-DISGYEVGTEIKVDIFKPGDRVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR+       +HG S  HR  GS G   DPGR FK KKM GRMG +RVT++NLEVV
Sbjct: 120 AGVIKRYGARRGPMSHG-SKYHRRVGSMGATTDPGRTFKGKKMPGRMGSDRVTIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  L++VKG VPG  K S +++RDS KS
Sbjct: 179 KVDPELNLLVVKGSVPGP-KGSLLIIRDSVKS 209


>gi|54307541|ref|YP_128561.1| 50S ribosomal protein L3 [Photobacterium profundum SS9]
 gi|81828878|sp|Q6LVB6|RL3_PHOPR RecName: Full=50S ribosomal protein L3
 gi|46911961|emb|CAG18759.1| putative ribosomal protein L3 [Photobacterium profundum SS9]
          Length = 209

 Score =  276 bits (707), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 92/210 (43%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT ++  EG  IPVTV+ ++  +V   ++L+ +GY A+Q+  G  K   VS
Sbjct: 2   IGLIGRKVGMTRIFTEEGISIPVTVVEVEANRVTQVKSLETDGYNAIQITTGTKKANRVS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF G
Sbjct: 62  KPAAGHFAKAGVEAGRGLWEFRLENGEEF-AVGAELNVELFNEVKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 VIKRWNFSTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPG+   + ++V+ + K+
Sbjct: 181 DAERNLLLIKGAVPGSIGGN-VIVKPAVKA 209


>gi|315122818|ref|YP_004063307.1| 50S ribosomal protein L3 [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313496220|gb|ADR52819.1| 50S ribosomal protein L3 [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 221

 Score =  276 bits (707), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 188/221 (85%), Positives = 206/221 (93%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR GVVARKLGMTCVYN+EG+R+PVTVLHLDNCQVV HRTL KNGYMAVQVGAG+AK+KN
Sbjct: 1   MRPGVVARKLGMTCVYNLEGKRLPVTVLHLDNCQVVAHRTLQKNGYMAVQVGAGDAKIKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKPMRGFFSSVN SPKK+L EFRVQK+D+LL +GSV SPS+F VGQLVDVTG+TIGKGF
Sbjct: 61  VSKPMRGFFSSVNASPKKRLSEFRVQKEDELLQIGSVLSPSHFNVGQLVDVTGVTIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNF GLRA+HGVSISHRS GSTGCRQDPGRVFKNKKMAG MGGNR+TVKNLEV+
Sbjct: 121 AGAMKRHNFAGLRASHGVSISHRSAGSTGCRQDPGRVFKNKKMAGHMGGNRITVKNLEVI 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
           S+DDKRGLI VKGCVPGAK +SWILVRDSFKSA N KGKV+
Sbjct: 181 SIDDKRGLIFVKGCVPGAKNDSWILVRDSFKSAANYKGKVA 221


>gi|302388088|ref|YP_003823910.1| 50S ribosomal protein L3 [Clostridium saccharolyticum WM1]
 gi|302198716|gb|ADL06287.1| 50S ribosomal protein L3 [Clostridium saccharolyticum WM1]
          Length = 211

 Score =  276 bits (706), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 91/213 (42%), Positives = 128/213 (60%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++A K+GMT ++N  G   PVTVL    C V   +T++ +GY AVQVG  + + K 
Sbjct: 1   MKKGILATKVGMTQIFNENGVLTPVTVLQAGPCVVTQVKTVENDGYSAVQVGYVDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKP++G F    VS K+ + EF+++   D   V        F  G  +D T ++ GKGF
Sbjct: 61  VSKPIKGHFDKAGVSYKRYVREFKLEN-ADQYSVKDEIKAEIFAAGDKIDATAISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G   DP +VFK KKM G+MG  +VT++NLE+V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SKFHRHAGSNGACSDPSKVFKGKKMPGQMGNKKVTIQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            VD +  LILVKG VPG KK S + ++++ K++
Sbjct: 179 RVDAENNLILVKGAVPGPKK-SLVTIKETVKAS 210


>gi|172087649|ref|YP_203618.2| 50S ribosomal subunit protein L3 [Vibrio fischeri ES114]
 gi|197333952|ref|YP_002154996.1| 50S ribosomal protein L3 [Vibrio fischeri MJ11]
 gi|226730588|sp|B5FG09|RL3_VIBFM RecName: Full=50S ribosomal protein L3
 gi|171902244|gb|AAW84730.2| 50S ribosomal subunit protein L3 [Vibrio fischeri ES114]
 gi|197315442|gb|ACH64889.1| 50S ribosomal protein L3 [Vibrio fischeri MJ11]
          Length = 209

 Score =  276 bits (706), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 134/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V RK+GMT ++  EG  IPVTV+ ++  +V   +T++ +GY A+QV  G  K   VS
Sbjct: 2   IGLVGRKVGMTRIFTEEGVSIPVTVVEVEANRVSQVKTVETDGYNAIQVTCGSKKANRVS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGAELTVEVFNEIKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPG+   + ++V+ + K+
Sbjct: 181 DAERNLLLIKGAVPGSTGGN-VIVKPAVKA 209


>gi|254516911|ref|ZP_05128969.1| ribosomal protein L3 [gamma proteobacterium NOR5-3]
 gi|219674416|gb|EED30784.1| ribosomal protein L3 [gamma proteobacterium NOR5-3]
          Length = 231

 Score =  276 bits (706), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 97/212 (45%), Positives = 128/212 (60%), Gaps = 1/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT V+  +G  IPVTV+ +   +V   +  D +GY ++QV AG  K   
Sbjct: 21  MTIGLVGRKSGMTRVFTEDGASIPVTVVEVSPNRVTQIKENDSDGYRSIQVTAGSRKAAK 80

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK   G F+   V   + L+EFR+  +D+   VG+  +   F  GQ VDV G + GKGF
Sbjct: 81  VSKSEAGLFAKAGVEAGRGLWEFRLSAEDESFEVGAELTVERFEEGQKVDVAGKSKGKGF 140

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF    ATHG S+SHR+ GS G  Q PGRVFK KKM+G+MG   VTV+ LE+V
Sbjct: 141 QGVIKRWNFSMQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMSGQMGNANVTVQGLEIV 200

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA     + VR + K 
Sbjct: 201 RVDAERNLLLIKGAVPGAPGGD-VFVRPAVKG 231


>gi|255282605|ref|ZP_05347160.1| 50S ribosomal protein L3 [Bryantella formatexigens DSM 14469]
 gi|255266898|gb|EET60103.1| 50S ribosomal protein L3 [Bryantella formatexigens DSM 14469]
          Length = 211

 Score =  275 bits (705), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 90/213 (42%), Positives = 127/213 (59%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G   PVTVL    C V   +T++ +GY AVQVG  + + K 
Sbjct: 1   MKKAILATKVGMTQIFNDDGVLTPVTVLQAGPCVVTQIKTVENDGYSAVQVGYVDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F    VS K+ L EF++   ++   V        F  G  +D T ++ GKGF
Sbjct: 61  VNKPLKGHFDKAGVSYKRYLREFKLDNAEE-YQVAQEIKADIFAAGDKIDATAISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G   DP +VF+ KKMAG MG  RVT++NLEVV
Sbjct: 120 QGAIKRHGLHRGPMAHG-SKYHRHAGSNGACSDPSKVFRGKKMAGHMGHKRVTIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            VD +  L+LVKG VPG KK S + ++++ K+ 
Sbjct: 179 RVDAENNLLLVKGAVPGPKK-SLVSIKETVKAG 210


>gi|148982483|ref|ZP_01816779.1| 50S ribosomal protein L3 [Vibrionales bacterium SWAT-3]
 gi|145960448|gb|EDK25827.1| 50S ribosomal protein L3 [Vibrionales bacterium SWAT-3]
          Length = 209

 Score =  275 bits (705), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 134/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V RK+GMT V+  EG  IPVTV+ ++  ++   +TL+ +GY A+QV  G  K   V+
Sbjct: 2   IGLVGRKVGMTRVFTEEGVSIPVTVVEVEANRISQVKTLENDGYAAIQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELNVELFNEIKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 AVKRWNFSTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPG+   + ++V+ + K+
Sbjct: 181 DAERNLLLIKGAVPGSTGGN-VIVKPAVKA 209


>gi|24981833|gb|AAN66084.1|AE016238_2 ribosomal protein L3 [Pseudomonas putida KT2440]
          Length = 222

 Score =  275 bits (705), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 100/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GV+ RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 12  MTIGVIGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 71

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + ++EFR+++ D     G +     FT GQLVDVTG + GKGF
Sbjct: 72  VTAAQAGHFAKANVAAGRGVWEFRLEEGD--FQAGDLIKAELFTAGQLVDVTGQSKGKGF 129

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 130 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 189

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA     + VR + K+
Sbjct: 190 RVDAERNLLLIKGAVPGATGGDVV-VRPAVKA 220


>gi|146278568|ref|YP_001168727.1| 50S ribosomal protein L3 [Rhodobacter sphaeroides ATCC 17025]
 gi|145556809|gb|ABP71422.1| LSU ribosomal protein L3P [Rhodobacter sphaeroides ATCC 17025]
          Length = 239

 Score =  275 bits (705), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 128/218 (58%), Positives = 162/218 (74%), Gaps = 2/218 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT ++  +G+++PVTVL LD+ QVV  RT +K+GY AVQ+GAG AK K 
Sbjct: 1   MRSGVIAKKLGMTRLFLEDGKQVPVTVLQLDSLQVVAQRTAEKDGYTAVQLGAGAAKAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S  MRG F+  NV PK+K+ EFRV  D  L+ VG+  +  ++  GQ VD+ G +IGKGF
Sbjct: 61  TSAGMRGHFAKANVEPKRKIAEFRVTPDC-LIDVGAEITADHYFAGQFVDIAGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NL+VV
Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
             D  RGLI+VKG VPG+ K  W+ ++D+ K  V  + 
Sbjct: 180 RTDSDRGLIMVKGAVPGS-KGGWVTIKDAVKKPVPEQA 216


>gi|37678559|ref|NP_933168.1| 50S ribosomal protein L3 [Vibrio vulnificus YJ016]
 gi|42559591|sp|Q7MPI8|RL3_VIBVY RecName: Full=50S ribosomal protein L3
 gi|37197299|dbj|BAC93139.1| ribosomal protein L3 [Vibrio vulnificus YJ016]
          Length = 209

 Score =  275 bits (705), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT V+  EG  IPVTV+ ++  ++   +TL+ +GY A+QV AG  K   V+
Sbjct: 2   IGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRIAQVKTLETDGYAAIQVTAGTKKANRVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F+   V   + L+EFR++  ++   VGS  +   F   + VDVTG + GKGF G
Sbjct: 62  KAEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 TVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPGA   + ++V+ + K+
Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAVKA 209


>gi|149203511|ref|ZP_01880481.1| 50S ribosomal protein L3 [Roseovarius sp. TM1035]
 gi|149143344|gb|EDM31383.1| 50S ribosomal protein L3 [Roseovarius sp. TM1035]
          Length = 280

 Score =  275 bits (705), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 122/215 (56%), Positives = 160/215 (74%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSGV+A+K+GMT ++  +G+++PVTVL LD  QVV  RT +K+GY AVQ+GAG AK K 
Sbjct: 2   LRSGVIAKKVGMTRLFLEDGKQVPVTVLQLDKLQVVAQRTPEKDGYTAVQLGAGTAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            ++ MRG F++  V PK+K+ EFRV  +  L+ VG   +  ++  GQ VDV+G +IGKGF
Sbjct: 62  TTQAMRGHFAAAKVEPKRKIAEFRVAPE-ALINVGEEITADHYFEGQFVDVSGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D  RGLI++KG VPG+ K  W+ ++D+ K    
Sbjct: 181 KTDADRGLIMIKGAVPGS-KGGWVTIKDAVKKPFP 214


>gi|103488295|ref|YP_617856.1| 50S ribosomal protein L3 [Sphingopyxis alaskensis RB2256]
 gi|123078063|sp|Q1GP99|RL3_SPHAL RecName: Full=50S ribosomal protein L3
 gi|98978372|gb|ABF54523.1| LSU ribosomal protein L3P [Sphingopyxis alaskensis RB2256]
          Length = 257

 Score =  275 bits (704), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 128/219 (58%), Positives = 161/219 (73%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR +PVTVL L+ CQVV  R  +++GY+AVQ+GAG AK KN
Sbjct: 1   MRTGVIAKKMGMTRLFQDDGRHVPVTVLSLEGCQVVSVRDKERDGYVAVQLGAGTAKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP RG +    V PK KL EFRV  DD  L VG+  S  +F  GQ+VD+ G+T GKGF
Sbjct: 61  VAKPQRGAYGKAEVEPKAKLVEFRV-ADDATLDVGAELSADHFVAGQMVDIQGVTQGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR  FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG    T +NLE+V
Sbjct: 120 AGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGARNRTQQNLEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
             D +RGL+ VKG VPG+ K  W+LVRD+ K   + +  
Sbjct: 180 RTDAERGLLFVKGSVPGS-KGGWLLVRDAVKLPRHPEAP 217


>gi|313904952|ref|ZP_07838323.1| 50S ribosomal protein L3 [Eubacterium cellulosolvens 6]
 gi|313470209|gb|EFR65540.1| 50S ribosomal protein L3 [Eubacterium cellulosolvens 6]
          Length = 211

 Score =  275 bits (704), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 92/212 (43%), Positives = 121/212 (57%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT +++  G  IPVTVL    C V   +T + +GY AVQVG GE + K 
Sbjct: 1   MKKAILATKVGMTQIFDETGASIPVTVLQAGPCVVTQVKTEENDGYAAVQVGFGEIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G F    V  K+ L EFR     +   V        F  G  +D T ++ GKGF
Sbjct: 61  VNKPKKGQFDKAEVPVKRYLQEFRFDNAAE-YEVKQEIKADIFADGDHIDATAISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G   DP +VFK K M G MG  +VTV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGSCSDPSKVFKGKHMPGHMGHVKVTVQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  L+LVKG VPG KK S I +++S K+
Sbjct: 179 KVDAENNLLLVKGSVPGPKK-SLITIKESVKA 209


>gi|254237126|ref|ZP_04930449.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa C3719]
 gi|126169057|gb|EAZ54568.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa C3719]
          Length = 211

 Score =  275 bits (704), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 100/212 (47%), Positives = 136/212 (64%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV AGE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEVEPNRVTQFKTEETDGYRAVQVTAGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+  NV+  + ++EFR+   ++   VG   +   F  GQ+VDVTG + GKGF
Sbjct: 61  VTKAQAGHFAKANVAAGRGVWEFRL--GEEQYAVGDQITVDLFQAGQMVDVTGESKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G +G  RVTV++LE+V
Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHLGAERVTVQSLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA     ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGD-VIVRPAAKA 209


>gi|294675856|ref|YP_003576471.1| 50S ribosomal protein L3 [Rhodobacter capsulatus SB 1003]
 gi|294474676|gb|ADE84064.1| 50S ribosomal protein L3 [Rhodobacter capsulatus SB 1003]
          Length = 238

 Score =  275 bits (704), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 128/216 (59%), Positives = 164/216 (75%), Gaps = 2/216 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT ++  +G+++PVTVL LDN QVV  RT++ +GY AVQ+GAGEAK K 
Sbjct: 1   MRSGVIAKKLGMTRLFLEDGKQVPVTVLLLDNLQVVAQRTVETDGYTAVQLGAGEAKAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +  MRG F+  NV+PK+KL EFRV  + +L+ VG+  S  ++  GQ VD+ G +IGKGF
Sbjct: 61  TTAAMRGHFAKANVAPKRKLCEFRVSPE-NLIDVGAEISAEHYLAGQHVDIAGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVS+SHRSHGSTG  QDPG+VFK KKMAG +G  RVT +NL+VV
Sbjct: 120 AGAMKRHNFGGLRASHGVSVSHRSHGSTGQCQDPGKVFKGKKMAGHLGAARVTTQNLQVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
             D  RGLI+VKG VPGA K  W+ ++D+ K A   
Sbjct: 180 RTDAARGLIMVKGSVPGA-KGGWVTIKDAVKKAAPA 214


>gi|288957422|ref|YP_003447763.1| large subunit ribosomal protein L3 [Azospirillum sp. B510]
 gi|288909730|dbj|BAI71219.1| large subunit ribosomal protein L3 [Azospirillum sp. B510]
          Length = 236

 Score =  275 bits (704), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 134/215 (62%), Positives = 168/215 (78%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT V+  +G+ +PVTVL +D+CQVV  RT +K+GY AVQ+GAG  KVKN
Sbjct: 1   MRSGLIAQKVGMTRVFTDDGQHVPVTVLKVDSCQVVAVRTEEKDGYTAVQLGAGAIKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP RG F+   V PK+KL EFRV  D  L+ VG+  S ++F  GQ VDVTG +IGKGF
Sbjct: 61  VNKPERGHFAKARVEPKRKLVEFRVDAD-ALIEVGAELSVTHFVAGQYVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG +G  RVTV NL+VV
Sbjct: 120 AGAMKRWNFGGLRATHGVSVSHRSHGSTGNRQDPGKVFKNKKMAGHLGDERVTVLNLQVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           +VD+ RGLI++KG VPGA+   W+ +RD+ K    
Sbjct: 180 AVDEARGLIMLKGAVPGAE-GGWLRIRDAVKKKAP 213


>gi|239995000|ref|ZP_04715524.1| 50S ribosomal subunit protein L3 [Alteromonas macleodii ATCC 27126]
          Length = 212

 Score =  275 bits (703), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+     +V   RT + +GY A+QV AG  K   
Sbjct: 1   MAIGLVGRKVGMTRIFTEDGTSIPVTVIEATPNRVTQLRTEETDGYRALQVTAGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++K   G F+   V   + L EFR+++++   + VGS  +   F   + +DVTG + GKG
Sbjct: 61  INKAEAGHFAKAGVEAGRTLVEFRLEENEGADIEVGSEITVEIFNDTKKIDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F GA+KR NF   R THG S+SHR+ GS G  Q PG+VFK KKMAG++G  +VT ++LEV
Sbjct: 121 FQGAIKRWNFSSQRMTHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQLGNKQVTTQSLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD + GLILVKG VPGA  N  ++V+ + K+
Sbjct: 181 VRVDVENGLILVKGAVPGATGND-VIVKPAVKA 212


>gi|146297285|ref|YP_001181056.1| 50S ribosomal protein L3 [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|166233129|sp|A4XLT0|RL3_CALS8 RecName: Full=50S ribosomal protein L3
 gi|145410861|gb|ABP67865.1| LSU ribosomal protein L3P [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 210

 Score =  275 bits (703), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 100/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V++  G+ +PVTV+    C VV  +T++K+GY A+QVG  + K   
Sbjct: 1   MTKGILGKKIGMTQVFDEAGKVVPVTVIEAGPCVVVQKKTVEKDGYAAIQVGFEDIKETK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+RG F+   V PK+ L E R+ KD D   VG       F+ G+ VDVTG++  KGF
Sbjct: 61  LNKPLRGHFAKHGVKPKRYLRELRL-KDADKYEVGQEIRVDIFSPGERVDVTGISKAKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       +HG S+ HR  GS G    P R F  KKM GRMGG RVTV NL+VV
Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGQRVTVLNLQVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPG  KNS +++RDS KS
Sbjct: 179 KVDPERNLLLVKGSVPG-NKNSLLIIRDSVKS 209


>gi|167036801|ref|YP_001664379.1| 50S ribosomal protein L3 [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|256752632|ref|ZP_05493484.1| ribosomal protein L3 [Thermoanaerobacter ethanolicus CCSD1]
 gi|320115223|ref|YP_004185382.1| 50S ribosomal protein L3 [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|226730582|sp|B0KCK0|RL3_THEP3 RecName: Full=50S ribosomal protein L3
 gi|166855635|gb|ABY94043.1| ribosomal protein L3 [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|256748452|gb|EEU61504.1| ribosomal protein L3 [Thermoanaerobacter ethanolicus CCSD1]
 gi|319928314|gb|ADV78999.1| 50S ribosomal protein L3 [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 210

 Score =  275 bits (703), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 97/212 (45%), Positives = 130/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ RK GMT +++ +G  IPVTV+    C VV  +T++ +GY A+QVG G+ K K 
Sbjct: 1   MKKGILGRKHGMTQIFDEKGEVIPVTVIEAGPCVVVQKKTVETDGYNAIQVGFGDVKEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+ G F    V  K+ L EFR+  D     VGS      F  G  VDVTG++ GKGF
Sbjct: 61  LTKPLIGHFKKAGVPFKRYLREFRLD-DISGYEVGSEIKVDIFKPGDRVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR+       +HG S  HR  GS G   DPGR FK K M G MG  RVT++NLEVV
Sbjct: 120 AGVVKRYGANRGPMSHG-SKYHRRVGSMGATTDPGRTFKGKIMPGHMGHERVTIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  L+LVKG VPG  K S ++++DS KS
Sbjct: 179 KVDPELNLLLVKGSVPGP-KGSLLIIKDSVKS 209


>gi|89053074|ref|YP_508525.1| 50S ribosomal protein L3 [Jannaschia sp. CCS1]
 gi|109893433|sp|Q28UW2|RL3_JANSC RecName: Full=50S ribosomal protein L3
 gi|88862623|gb|ABD53500.1| LSU ribosomal protein L3P [Jannaschia sp. CCS1]
          Length = 290

 Score =  275 bits (703), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 128/215 (59%), Positives = 158/215 (73%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSGV+A+K+GMT ++  +G++IPVTVL LD  QVV  +T D +GY AVQ+GAG AK K 
Sbjct: 2   LRSGVIAKKVGMTRLFMEDGKQIPVTVLQLDKLQVVAKKTSDSDGYSAVQLGAGTAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S PMRG F+  +V PK+KL EFRV  D +L+ VG      ++  GQ VDVTG +IGKGF
Sbjct: 62  TSAPMRGVFAKASVEPKRKLVEFRVDAD-NLIEVGEEIIADHYFEGQFVDVTGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPGRVFK KKMAG MG  RVT +NL++V
Sbjct: 121 QGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGRVFKGKKMAGHMGAARVTTQNLQIV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D  RGLI++KG VPG+ K  W+ V+D+ K    
Sbjct: 181 RTDTDRGLIMIKGAVPGS-KGGWVTVKDAVKKPFP 214


>gi|332139848|ref|YP_004425586.1| 50S ribosomal protein L3 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|332139861|ref|YP_004425599.1| 50S ribosomal protein L3 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|226725125|sp|B4RZN2|RL3_ALTMD RecName: Full=50S ribosomal protein L3
 gi|327549870|gb|AEA96588.1| 50S ribosomal protein L3 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327549883|gb|AEA96601.1| 50S ribosomal protein L3 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 212

 Score =  275 bits (703), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+     +V   RT + +GY A+QV AG  K   
Sbjct: 1   MAIGLVGRKVGMTRIFTEDGTSIPVTVIEATPNRVTQLRTEESDGYRALQVTAGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++K   G F+   V   + L EFR+++++   + VGS  +   F   + +DVTG + GKG
Sbjct: 61  INKAEAGHFAKAGVEAGRTLVEFRLEENEGADIEVGSEITVEIFNDTKKIDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F GA+KR NF   R THG S+SHR+ GS G  Q PG+VFK KKMAG++G  +VT ++LEV
Sbjct: 121 FQGAIKRWNFSSQRMTHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQLGNKQVTTQSLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD + GLILVKG VPGA  N  ++V+ + K+
Sbjct: 181 VRVDVENGLILVKGAVPGATGND-VIVKPAVKA 212


>gi|145300935|ref|YP_001143776.1| 50S ribosomal protein L3 [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|166233113|sp|A4ST06|RL3_AERS4 RecName: Full=50S ribosomal protein L3
 gi|142853707|gb|ABO92028.1| ribosomal protein L3 [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 210

 Score =  274 bits (702), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 95/212 (44%), Positives = 133/212 (62%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+ ++  +V   ++++ +GY A+QV  G  K   
Sbjct: 1   MTIGLVGRKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKSVETDGYNAIQVTTGAKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP  G F+   V   + L+EFR+    +   VGS          ++VDVTG + GKGF
Sbjct: 61  VTKPEAGHFAKAGVEAGRGLWEFRLNNG-ETFTVGSELKVDLLADVKMVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V
Sbjct: 120 AGTVKRHNFRTQDMTHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHMGAERVTTQNLELV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA  N  ++V+ + K+
Sbjct: 180 RVDAERNLLLIKGAVPGA-TNGNVIVKPAVKA 210


>gi|330505207|ref|YP_004382076.1| 50S ribosomal protein L3 [Pseudomonas mendocina NK-01]
 gi|328919493|gb|AEB60324.1| 50S ribosomal protein L3 [Pseudomonas mendocina NK-01]
          Length = 209

 Score =  274 bits (702), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 102/212 (48%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +  + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKNEESDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK   G F+  NV+  + + EFR+++ D     G + +   F  GQLVDVTG + GKGF
Sbjct: 61  VSKAQAGHFAKANVAAGRTVLEFRLEEGD--YQAGDLINAEIFQAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA     ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGD-VIVRPAVKA 209


>gi|312115687|ref|YP_004013283.1| 50S ribosomal protein L3 [Rhodomicrobium vannielii ATCC 17100]
 gi|311220816|gb|ADP72184.1| 50S ribosomal protein L3 [Rhodomicrobium vannielii ATCC 17100]
          Length = 236

 Score =  274 bits (702), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 125/215 (58%), Positives = 161/215 (74%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++   G  +PVTVL LD CQV+ HRT + NGY A+QVGAG  KVKN
Sbjct: 1   MRSGLLAQKVGMTRIFTEAGEHVPVTVLKLDQCQVIAHRTQEANGYTAIQVGAGSRKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++  RG F+   V PK K+ EFRV  + +++ VG+  +  +F  GQ VDV G +IGKGF
Sbjct: 61  VTRAERGHFAKAQVEPKAKVVEFRVTPE-NVIEVGAELTADHFLAGQFVDVIGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRATHGVSISHRSHGSTG RQDPG+ FK KKMAG MG +RVT +NL+VV
Sbjct: 120 AGAMKRWNFGGLRATHGVSISHRSHGSTGNRQDPGKTFKGKKMAGHMGVDRVTTQNLQVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D +RGL+L++G VPGA K  W++V+D+ K  + 
Sbjct: 180 RTDVERGLLLIRGAVPGA-KGGWVMVKDAVKKPLP 213


>gi|117619475|ref|YP_854839.1| ribosomal protein L3 [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|166233112|sp|A0KF21|RL3_AERHH RecName: Full=50S ribosomal protein L3
 gi|117560882|gb|ABK37830.1| ribosomal protein L3 [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 210

 Score =  274 bits (702), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 95/212 (44%), Positives = 131/212 (61%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+ ++  +V   ++++ +GY A+QV  G  K   
Sbjct: 1   MTIGLVGRKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKSVETDGYNAIQVTTGAKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP  G F+   V   + L+EFR+    +   VGS          +LVDVTG + GKGF
Sbjct: 61  VTKPEAGHFAKAGVEAGRGLWEFRLNNG-ETFTVGSELKVDLLADVKLVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF     THG S+SHR  GS G  Q PGRVFK KKMAG MG  RVT +NLE+V
Sbjct: 120 AGTVKRWNFRTQDMTHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGHMGAERVTTQNLELV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA  N  ++V+ + K+
Sbjct: 180 RVDAERNLLLIKGAVPGA-TNGNVIVKPAVKA 210


>gi|262273379|ref|ZP_06051193.1| LSU ribosomal protein L3p (L3e) [Grimontia hollisae CIP 101886]
 gi|262222357|gb|EEY73668.1| LSU ribosomal protein L3p (L3e) [Grimontia hollisae CIP 101886]
          Length = 209

 Score =  274 bits (702), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 96/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V RK+GMT ++  EG  IPVTV+ ++  +V   RT + +GY A+QV  G  K   ++
Sbjct: 2   IGLVGRKVGMTRIFTEEGVSIPVTVVEVETNRVTQVRTPEVDGYSAIQVTTGVKKASRIT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELNVDLFADIKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPGA   S ++V+ + K+
Sbjct: 181 DAERKLLLIKGAVPGA-TGSNVIVKPAVKA 209


>gi|266620263|ref|ZP_06113198.1| 50S ribosomal protein L3 [Clostridium hathewayi DSM 13479]
 gi|288868166|gb|EFD00465.1| 50S ribosomal protein L3 [Clostridium hathewayi DSM 13479]
          Length = 211

 Score =  274 bits (702), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 93/214 (43%), Positives = 128/214 (59%), Gaps = 3/214 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++A K+GMT ++N +G   PVTVL    C V   +T + +GY AVQVG  + + K 
Sbjct: 1   MKKGILATKVGMTQIFNEDGVLTPVTVLLAGPCVVTQVKTAENDGYDAVQVGFVDKRAKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKP++G F    VS K+ + EF+ +   +   V        F  G  +D T ++ GKGF
Sbjct: 61  VSKPVKGHFDKAGVSYKRYVREFKFENASE-YSVKDEIKADIFAAGDKIDATAISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G   DP +VFK KKM G+MG  RVT++NLE+V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SKFHRHAGSNGSCSDPSKVFKGKKMPGQMGNKRVTIQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            VD +  LILVKG VPG KK S + ++++ K+AV
Sbjct: 179 KVDAENNLILVKGAVPGPKK-SLVTIKETVKAAV 211


>gi|221133614|ref|ZP_03559919.1| 50S ribosomal subunit protein L3 [Glaciecola sp. HTCC2999]
          Length = 212

 Score =  274 bits (702), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 95/213 (44%), Positives = 129/213 (60%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+     +V   RT + +GY A+QV AG  K   
Sbjct: 1   MAIGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRVTQLRTEETDGYRALQVTAGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQK-DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V     L+EFR+   + + + VGS  +   F     VDV G + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGSGLWEFRLDDSEGENIEVGSEITVELFNDTNKVDVVGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F GA+KR NF   R THG S+SHR+ GS G  Q PG+VFK KKMAG++G  RVT  +LE+
Sbjct: 121 FQGAIKRWNFSSQRMTHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQLGNKRVTTISLEL 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +  L+L+KG VPGA   S ++VR + K+
Sbjct: 181 VRVDVENNLLLIKGAVPGA-TGSDVIVRPAVKA 212


>gi|149915844|ref|ZP_01904368.1| 30S ribosomal protein S10 [Roseobacter sp. AzwK-3b]
 gi|149810167|gb|EDM70013.1| 30S ribosomal protein S10 [Roseobacter sp. AzwK-3b]
          Length = 276

 Score =  274 bits (702), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 124/215 (57%), Positives = 158/215 (73%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSGV+A+K+GMT ++  +GR++PVTVL LD  QVV  RT +K+GY AVQ+GAG  K K 
Sbjct: 2   LRSGVIAKKVGMTRLFMEDGRQVPVTVLQLDKLQVVAQRTPEKDGYTAVQLGAGSIKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS+PMRG F+S  V PK+K+ EFRV  + +++ VG   +  ++  GQ VDV G +IGKGF
Sbjct: 62  VSQPMRGHFASAKVEPKRKIAEFRVAPE-NMINVGEEITADHYFAGQYVDVCGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNF GL  THGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NL+VV
Sbjct: 121 AGAMKRHNFKGLEMTHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D  RGLI+VKG VPG+ K  W+ ++D+ K    
Sbjct: 181 KTDADRGLIMVKGAVPGS-KGGWVTIKDAVKKPFP 214


>gi|126739691|ref|ZP_01755383.1| 50S ribosomal protein L3 [Roseobacter sp. SK209-2-6]
 gi|126719337|gb|EBA16047.1| 50S ribosomal protein L3 [Roseobacter sp. SK209-2-6]
          Length = 234

 Score =  274 bits (702), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 135/215 (62%), Positives = 164/215 (76%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  +G++IPVTVLHLD  QVV  RT DK+GY AVQ+GAG AKVK 
Sbjct: 1   MRSGIIAKKVGMTRLFMEDGQQIPVTVLHLDGLQVVSQRTEDKDGYTAVQLGAGSAKVKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK MRG F++  V PK+KL EFRV   D L+ VG+  S  +F  GQ VDVTG +IGKGF
Sbjct: 61  VSKAMRGHFAASKVEPKRKLVEFRV-PADALIEVGAEISAEHFLEGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D +RGL+ +KG VPG  K+ W+ V+D+ K    
Sbjct: 180 KTDAERGLVFIKGAVPGP-KSGWVTVKDAVKKKAP 213


>gi|146308923|ref|YP_001189388.1| 50S ribosomal protein L3 [Pseudomonas mendocina ymp]
 gi|166233181|sp|A4XZ90|RL3_PSEMY RecName: Full=50S ribosomal protein L3
 gi|145577124|gb|ABP86656.1| LSU ribosomal protein L3P [Pseudomonas mendocina ymp]
          Length = 209

 Score =  274 bits (702), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 102/212 (48%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +  + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKNEESDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK   G F+  NV+  + + EFR+++ D     G + +   F  GQLVDVTG + GKGF
Sbjct: 61  VSKAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDLINAEIFQAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA     ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGD-VIVRPAVKA 209


>gi|332172249|gb|AEE21503.1| 50S ribosomal protein L3 [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 212

 Score =  274 bits (702), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 92/213 (43%), Positives = 134/213 (62%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  IPVTV+     +V   RT + +GY A+QV AG+ K   
Sbjct: 1   MAIGLIGRKVGMTRIFTEDGVSIPVTVIEATPNRVTQLRTDETDGYTALQVTAGDKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQK-DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L+EFR+   + + + VGS  +   F   ++VDV G + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLWEFRLDGTEGEGIEVGSEITVEIFAETKMVDVAGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F GA+KR NF   R +HG S+SHR+ GS G  Q PG+VFK KKMAG+MG  RVTV++L+V
Sbjct: 121 FQGAIKRWNFSHQRNSHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNKRVTVQSLDV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +  L+LV+G VPGA     ++++ + K+
Sbjct: 181 VRVDAENNLLLVRGNVPGAPGGD-VIIKAAVKA 212


>gi|289579145|ref|YP_003477772.1| 50S ribosomal protein L3 [Thermoanaerobacter italicus Ab9]
 gi|297545329|ref|YP_003677631.1| 50S ribosomal protein L3 [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|289528858|gb|ADD03210.1| 50S ribosomal protein L3 [Thermoanaerobacter italicus Ab9]
 gi|296843104|gb|ADH61620.1| 50S ribosomal protein L3 [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 210

 Score =  274 bits (701), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 97/212 (45%), Positives = 129/212 (60%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ RK GMT +++ +G  IPVTV+    C VV  +T + +GY A+QVG G+ K K 
Sbjct: 1   MKKGILGRKHGMTQIFDEKGEVIPVTVIEAGPCVVVQKKTTETDGYNAIQVGFGDVKEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+ G F    V  K+ L EFR+  D     VGS      F  G  VDVTG++ GKGF
Sbjct: 61  LTKPLIGHFKKAGVPFKRYLREFRLD-DVSGYEVGSEIKVDIFKPGDRVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR+       +HG S  HR  GS G   DPGR FK K M G MG  RVT++NLEVV
Sbjct: 120 AGVVKRYGASRGPMSHG-SKYHRRVGSMGATTDPGRTFKGKIMPGHMGHKRVTIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  L+LVKG VPG  K S ++++DS KS
Sbjct: 179 KVDPELNLLLVKGSVPGP-KGSLLIIKDSVKS 209


>gi|15599459|ref|NP_252953.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa PAO1]
 gi|116052298|ref|YP_788856.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|152989623|ref|YP_001346223.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa PA7]
 gi|218889409|ref|YP_002438273.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa LESB58]
 gi|296387180|ref|ZP_06876679.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa PAb1]
 gi|42559696|sp|Q9HWD5|RL3_PSEAE RecName: Full=50S ribosomal protein L3
 gi|122261447|sp|Q02T80|RL3_PSEAB RecName: Full=50S ribosomal protein L3
 gi|166233180|sp|A6UZI8|RL3_PSEA7 RecName: Full=50S ribosomal protein L3
 gi|226730551|sp|B7V644|RL3_PSEA8 RecName: Full=50S ribosomal protein L3
 gi|9950480|gb|AAG07651.1|AE004841_29 50S ribosomal protein L3 [Pseudomonas aeruginosa PAO1]
 gi|115587519|gb|ABJ13534.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|150964781|gb|ABR86806.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa PA7]
 gi|218769632|emb|CAW25392.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa LESB58]
          Length = 211

 Score =  274 bits (701), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 99/212 (46%), Positives = 135/212 (63%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV AGE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEVEPNRVTQFKTEETDGYRAVQVTAGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+  NV+  + ++EFR+   ++    G   +   F  GQ+VDVTG + GKGF
Sbjct: 61  VTKAQAGHFAKANVAAGRGVWEFRL--GEEQYAAGDQITVDLFQAGQMVDVTGESKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G +G  RVTV++LE+V
Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHLGAERVTVQSLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA     ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGD-VIVRPAAKA 209


>gi|260577181|ref|ZP_05845158.1| ribosomal protein L3 [Rhodobacter sp. SW2]
 gi|259020655|gb|EEW23974.1| ribosomal protein L3 [Rhodobacter sp. SW2]
          Length = 241

 Score =  274 bits (701), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 123/216 (56%), Positives = 161/216 (74%), Gaps = 2/216 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT ++  +G+++PVTVL LD  QVV  RT +++GY AVQ+GAG AK K 
Sbjct: 1   MRSGVIAKKLGMTRLFLEDGKQVPVTVLQLDALQVVAQRTAERDGYTAVQLGAGAAKAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +  MRG F++ NV+PK+K+ EFRV  D +L+ VG+  +  ++  GQ VD+ G +IGKGF
Sbjct: 61  TTAGMRGHFAAANVAPKRKIAEFRVSPD-NLIDVGAEITADHYLAGQFVDIAGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GAMKRHNFGGLRA+HGVS+SHRSHGSTG  QDPG+VFK KKMAG MG  R T +NL+VV
Sbjct: 120 QGAMKRHNFGGLRASHGVSVSHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRCTTQNLQVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
             D  RGLI++KG VPG+ K  W+ ++D+ K A   
Sbjct: 180 RTDADRGLIMIKGAVPGS-KGGWVTIKDAVKKAAPA 214


>gi|146281170|ref|YP_001171323.1| 50S ribosomal protein L3 [Pseudomonas stutzeri A1501]
 gi|166233183|sp|A4VHN0|RL3_PSEU5 RecName: Full=50S ribosomal protein L3
 gi|145569375|gb|ABP78481.1| ribosomal protein L3 [Pseudomonas stutzeri A1501]
 gi|327479323|gb|AEA82633.1| 50S ribosomal protein L3 [Pseudomonas stutzeri DSM 4166]
          Length = 211

 Score =  274 bits (701), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 100/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT V+  +G  IPVTV+ ++  +V   +  + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRVFTEDGVSIPVTVIEIEPNRVTQFKNEESDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+  NV+  + ++EFR++ ++    VG   +   F  GQLVDVTG + GKGF
Sbjct: 61  VTKAQAGHFAKANVAAGRGVWEFRLEGEE--FQVGDQINAEIFQAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LE+V
Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA     + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGD-VFVRPAVKA 209


>gi|148545739|ref|YP_001265841.1| 50S ribosomal protein L3 [Pseudomonas putida F1]
 gi|161378147|ref|NP_742620.2| 50S ribosomal protein L3 [Pseudomonas putida KT2440]
 gi|167031500|ref|YP_001666731.1| 50S ribosomal protein L3 [Pseudomonas putida GB-1]
 gi|325272044|ref|ZP_08138485.1| 50S ribosomal protein L3 [Pseudomonas sp. TJI-51]
 gi|42559622|sp|Q88QN5|RL3_PSEPK RecName: Full=50S ribosomal protein L3
 gi|166233182|sp|A5VXP7|RL3_PSEP1 RecName: Full=50S ribosomal protein L3
 gi|189042858|sp|B0KK67|RL3_PSEPG RecName: Full=50S ribosomal protein L3
 gi|148509797|gb|ABQ76657.1| LSU ribosomal protein L3P [Pseudomonas putida F1]
 gi|166857988|gb|ABY96395.1| ribosomal protein L3 [Pseudomonas putida GB-1]
 gi|313496819|gb|ADR58185.1| RplC [Pseudomonas putida BIRD-1]
 gi|324102821|gb|EGC00227.1| 50S ribosomal protein L3 [Pseudomonas sp. TJI-51]
          Length = 211

 Score =  274 bits (701), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 100/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GV+ RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVIGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + ++EFR+++ D     G +     FT GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRGVWEFRLEEGD--FQAGDLIKAELFTAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA     + VR + K+
Sbjct: 179 RVDAERNLLLIKGAVPGATGGDVV-VRPAVKA 209


>gi|330827883|ref|YP_004390835.1| 50S ribosomal protein L3 [Aeromonas veronii B565]
 gi|328803019|gb|AEB48218.1| 50S ribosomal protein L3 [Aeromonas veronii B565]
          Length = 210

 Score =  273 bits (700), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 96/212 (45%), Positives = 132/212 (62%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+ ++  +V   ++++ +GY A+QV  G  K   
Sbjct: 1   MTIGLVGRKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKSVETDGYNAIQVTTGAKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP  G F+   V   + L+EFR+    +   VGS          +LVDVTG + GKGF
Sbjct: 61  VTKPEAGHFAKAGVEAGRGLWEFRLNNG-ETFTVGSELKVDLLADVKLVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNF     THG S+SHR  GS G  Q PGRVFK KKMAG MG  RVT +NLE+V
Sbjct: 120 AGTVKRHNFRTQDMTHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGHMGAERVTTQNLELV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA  N  ++V+ + K+
Sbjct: 180 RVDAERNLLLIKGAVPGA-TNGNVIVKPAVKA 210


>gi|77359116|ref|YP_338691.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|109893540|sp|Q3IF25|RL3_PSEHT RecName: Full=50S ribosomal protein L3
 gi|76874027|emb|CAI85248.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 211

 Score =  273 bits (700), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 93/212 (43%), Positives = 127/212 (59%), Gaps = 1/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+     ++   ++   +GY A+QV AG  K   
Sbjct: 1   MALGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRIAQIKSEATDGYNALQVTAGTKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+   V   + L+EFR+   +    VG+  +   F     VDVTG + GKGF
Sbjct: 61  VNKASAGHFAKAGVEAGRGLWEFRLNGGEGDFEVGAELTVELFNEINKVDVTGTSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG MG  RVT +NLE+V
Sbjct: 121 QGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGHMGAERVTTQNLELV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA     ++V+ + K+
Sbjct: 181 RVDAERNLLLVKGAVPGAIGGD-VIVKPAVKA 211


>gi|58038855|ref|YP_190819.1| 50S ribosomal protein L3 [Gluconobacter oxydans 621H]
 gi|81819160|sp|Q5FTY3|RL3_GLUOX RecName: Full=50S ribosomal protein L3
 gi|58001269|gb|AAW60163.1| LSU ribosomal protein L3P [Gluconobacter oxydans 621H]
          Length = 227

 Score =  273 bits (700), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 127/219 (57%), Positives = 163/219 (74%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+KLGMT ++  +G  +PVTVLHLDN +VV  RT +++GY A+Q+G G AKVKN
Sbjct: 1   MRTGLIAKKLGMTRLFKEDGTHVPVTVLHLDNVEVVDARTNERDGYTAIQLGLGNAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K  RG F+   V PK+ L EFRV +D  LL  G+  S ++F VGQ VDVTG + GKGF
Sbjct: 61  VTKANRGHFARTKVEPKRHLAEFRVSED-ALLEAGTKLSAAHFVVGQKVDVTGQSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG  RVT  NLE+ 
Sbjct: 120 AGVMKRHNFAGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGDERVTTLNLEIA 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           +VD++R LI+V+G +PGA KN  +L+RD+ K A +    
Sbjct: 180 AVDEERNLIMVRGAIPGA-KNGLVLIRDAIKKARHADAP 217


>gi|70732882|ref|YP_262650.1| 50S ribosomal protein L3 [Pseudomonas fluorescens Pf-5]
 gi|109893539|sp|Q4K533|RL3_PSEF5 RecName: Full=50S ribosomal protein L3
 gi|68347181|gb|AAY94787.1| ribosomal protein L3 [Pseudomonas fluorescens Pf-5]
          Length = 211

 Score =  273 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 100/212 (47%), Positives = 135/212 (63%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + ++EFR+++ +     G + +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRGVWEFRLEEGE--YQAGDLINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209


>gi|330962525|gb|EGH62785.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 211

 Score =  273 bits (699), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 101/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR+++ D     G + +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDLINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209


>gi|254466883|ref|ZP_05080294.1| ribosomal protein L3 [Rhodobacterales bacterium Y4I]
 gi|206687791|gb|EDZ48273.1| ribosomal protein L3 [Rhodobacterales bacterium Y4I]
          Length = 234

 Score =  273 bits (699), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 132/215 (61%), Positives = 162/215 (75%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  +G++IPVTVLHLD  QVV  RT DK+GY AVQ+GAG AK K 
Sbjct: 1   MRSGIIAKKVGMTRLFMEDGKQIPVTVLHLDGLQVVAQRTEDKDGYTAVQLGAGTAKAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ MRG F++  V PK+KL EFRV   D L+ VG+  S  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSQAMRGHFAAAKVEPKRKLVEFRV-PADALIEVGAEISAEHFLAGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D +RGL+ +KG VPG  K+ W+ V+D+ K    
Sbjct: 180 KTDAERGLVFIKGAVPGP-KSGWVTVKDAVKKKAP 213


>gi|307543825|ref|YP_003896304.1| 50S ribosomal protein L3 [Halomonas elongata DSM 2581]
 gi|307215849|emb|CBV41119.1| 50S ribosomal protein L3 [Halomonas elongata DSM 2581]
          Length = 212

 Score =  273 bits (699), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 96/213 (45%), Positives = 134/213 (62%), Gaps = 1/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V +K GMT V+  +G  +PVTV+ ++  +V   ++++ +GY AVQV  G  K K+
Sbjct: 1   MTIGLVGKKAGMTRVFTEDGASVPVTVIEVEPNRVTRVKSVESDGYAAVQVTTGSRKAKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SK   G F+   V   + L EFR+ +  +   VG   + S F  GQ VDVTG + GKG+
Sbjct: 61  LSKAQAGEFAKAGVEAGRSLMEFRLDEGAEAPEVGGELTVSLFEAGQRVDVTGTSKGKGY 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR NF     +HG S++HR+ GS G  Q PGRVFK KKMAG+MG  R TV+ LEVV
Sbjct: 121 QGAVKRWNFRTQDNSHGNSLAHRAPGSIGMCQTPGRVFKGKKMAGQMGNARCTVQTLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            VD +R L+L+KG VPGA   S ++VR + K+ 
Sbjct: 181 RVDAERNLLLIKGAVPGA-TGSDVIVRSAVKAG 212


>gi|109896798|ref|YP_660053.1| ribosomal protein L3 [Pseudoalteromonas atlantica T6c]
 gi|123171764|sp|Q15YN9|RL3_PSEA6 RecName: Full=50S ribosomal protein L3
 gi|109699079|gb|ABG38999.1| LSU ribosomal protein L3P [Pseudoalteromonas atlantica T6c]
          Length = 212

 Score =  273 bits (699), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 92/213 (43%), Positives = 134/213 (62%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  IPVTV+     +V   RT + +GY A+QV AG+ K   
Sbjct: 1   MAIGLIGRKVGMTRIFTEDGVSIPVTVIEATPNRVTQLRTDETDGYTALQVTAGDKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQ-KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L+EFR+   + + + VGS  +   F   ++VDV G + GKG
Sbjct: 61  VNKAAAGHFAKAGVEAGRGLWEFRLDGNEGEGIEVGSEITVEIFAETKMVDVAGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F GA+KR NF   R +HG S+SHR+ GS G  Q PG+VFK KKMAG+MG  RVTV++L+V
Sbjct: 121 FQGAIKRWNFSHQRNSHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNKRVTVQSLDV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +  L+LV+G VPGA     ++++ + K+
Sbjct: 181 VRVDAENNLLLVRGNVPGAPGGD-VIIKAAVKA 212


>gi|254294440|ref|YP_003060463.1| ribosomal protein L3 [Hirschia baltica ATCC 49814]
 gi|254042971|gb|ACT59766.1| ribosomal protein L3 [Hirschia baltica ATCC 49814]
          Length = 243

 Score =  273 bits (699), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 128/215 (59%), Positives = 160/215 (74%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+KLGMT V+  +G  IPVTVL LD CQVV  RT +++GY+A+Q+GAG  K KN
Sbjct: 1   MRTGLLAKKLGMTRVFGEDGAHIPVTVLQLDGCQVVGQRTKERDGYVALQLGAGSRKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPMRG F++  V PK  L EFRV +D  L+ VG+ FS  +F  GQ VD+ G   GKGF
Sbjct: 61  VTKPMRGQFAAAKVEPKAVLREFRVDEDM-LVDVGAEFSAEHFVPGQKVDIAGTAKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRA+HGVSISHR+ GSTG  QDPG+VFK KKMAG+ G  R+T +N+EVV
Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRALGSTGQCQDPGKVFKGKKMAGQYGNVRITTQNIEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            VD  RGL+LVKG VP + KN W+ VRD+ K A  
Sbjct: 180 RVDADRGLVLVKGAVP-SAKNGWVEVRDAVKKAAP 213


>gi|229592903|ref|YP_002875022.1| 50S ribosomal protein L3 [Pseudomonas fluorescens SBW25]
 gi|259709731|sp|C3K2X6|RL3_PSEFS RecName: Full=50S ribosomal protein L3
 gi|229364769|emb|CAY52766.1| 50S ribosomal protein L3 [Pseudomonas fluorescens SBW25]
          Length = 211

 Score =  273 bits (699), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR++  D     G + +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEDGD--YQAGDLINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209


>gi|329889129|ref|ZP_08267472.1| 50S ribosomal protein L3 [Brevundimonas diminuta ATCC 11568]
 gi|328844430|gb|EGF93994.1| 50S ribosomal protein L3 [Brevundimonas diminuta ATCC 11568]
          Length = 247

 Score =  273 bits (699), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 124/219 (56%), Positives = 155/219 (70%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+KLGMT V+  +G  +PVTVL LD CQVV  RT +++GY+A+Q+GAG  K KN
Sbjct: 1   MRTGVIAKKLGMTRVFADDGAHVPVTVLQLDGCQVVGQRTKERDGYVALQLGAGVKKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +K  R  F+   V PK  + EFRV  +D LL VG+  S  +F  GQ VD+ G TIGKGF
Sbjct: 61  TAKAQREVFAKAEVEPKAYVTEFRV-GEDALLDVGAELSADHFLAGQKVDIQGHTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRA+HGVSISHRSHGSTG RQDPG+VFK KKMAG +G   VT +NL VV
Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHLGQEVVTTQNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            VD +RGLIL+KG VPG    +++ + D+ K A      
Sbjct: 180 RVDAERGLILIKGAVPG-HDGAYVKISDAIKKARPADAP 217


>gi|170729009|ref|YP_001763035.1| 50S ribosomal protein L3 [Shewanella woodyi ATCC 51908]
 gi|226730568|sp|B1KMY3|RL3_SHEWM RecName: Full=50S ribosomal protein L3
 gi|169814356|gb|ACA88940.1| ribosomal protein L3 [Shewanella woodyi ATCC 51908]
          Length = 212

 Score =  273 bits (699), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 94/213 (44%), Positives = 132/213 (61%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  IPVTV+ +   +V   RTL+ +GY A+QV  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFTEDGASIPVTVIEIAANRVTQVRTLETDGYRALQVTTGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++KP  G F+   V   + L+E R+  D+ + + VG+  +   F     VDVTG + GKG
Sbjct: 61  ITKPEAGHFAKAGVEAGRGLWEVRLADDEGEGIEVGAELNVDIFADVAKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF     THG S++HRS+GS G  Q PGRVFK KKM+G MG  RVT +NL+V
Sbjct: 121 FQGGIKRWNFHAQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LVKG VPGA   + I ++ + K+
Sbjct: 181 VRVDAERNLLLVKGAVPGATNGNLI-IKPAVKA 212


>gi|66047775|ref|YP_237616.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. syringae B728a]
 gi|257483185|ref|ZP_05637226.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|289648942|ref|ZP_06480285.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|289675488|ref|ZP_06496378.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. syringae FF5]
 gi|298489097|ref|ZP_07007119.1| LSU ribosomal protein L3p (L3e) [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|81307859|sp|Q4ZMP4|RL3_PSEU2 RecName: Full=50S ribosomal protein L3
 gi|63258482|gb|AAY39578.1| Ribosomal protein L3 [Pseudomonas syringae pv. syringae B728a]
 gi|298156409|gb|EFH97507.1| LSU ribosomal protein L3p (L3e) [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|330891931|gb|EGH24592.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. mori str.
           301020]
 gi|330953197|gb|EGH53457.1| 50S ribosomal protein L3 [Pseudomonas syringae Cit 7]
 gi|330969821|gb|EGH69887.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. aceris str.
           M302273PT]
 gi|330976640|gb|EGH76684.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. aptata str. DSM
           50252]
 gi|331012413|gb|EGH92469.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 211

 Score =  273 bits (699), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR+++ D     G   +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209


>gi|86135762|ref|ZP_01054341.1| 50S ribosomal protein L3 [Roseobacter sp. MED193]
 gi|85826636|gb|EAQ46832.1| 50S ribosomal protein L3 [Roseobacter sp. MED193]
          Length = 236

 Score =  273 bits (699), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 133/215 (61%), Positives = 160/215 (74%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  +G++IPVTVLHLD  QVV  RT DK+GY AVQ+GAG AK K 
Sbjct: 1   MRSGIIAKKVGMTRLFMEDGQQIPVTVLHLDGLQVVSQRTDDKDGYTAVQLGAGSAKAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F++  V PK+KL EFRV   D L+ VG+  S  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSKAMRGHFAASKVEPKRKLVEFRV-PADALIEVGAEISAEHFLEGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRWNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D  RGL+ +KG VPG  K+ W+ V+D+ K    
Sbjct: 180 KTDADRGLVFIKGAVPGP-KSGWVTVKDAVKKKAP 213


>gi|119383511|ref|YP_914567.1| 50S ribosomal protein L3 [Paracoccus denitrificans PD1222]
 gi|166233172|sp|A1B027|RL3_PARDP RecName: Full=50S ribosomal protein L3
 gi|119373278|gb|ABL68871.1| LSU ribosomal protein L3P [Paracoccus denitrificans PD1222]
          Length = 245

 Score =  273 bits (698), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 121/214 (56%), Positives = 165/214 (77%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+GV+A+KLGMT ++  +GR++PVTVLH+DN QV+  RT +++GY+A+Q+GAGEAK K 
Sbjct: 2   LRTGVIAKKLGMTRLFLEDGRQVPVTVLHVDNVQVIAQRTAEQDGYVALQLGAGEAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +  +RG F+  NV+PK+K+ EFRV  + +L+ VG      ++  GQ VD+ G +IGKGF
Sbjct: 62  TTAALRGHFAKANVAPKRKIAEFRVSPE-NLVEVGEEIVADHYFEGQYVDIAGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG +G  RVT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHLGAVRVTTQNLQVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
             D +RGLI+VKG VPG+ K  W+ ++D+ K  +
Sbjct: 181 KTDAERGLIMVKGSVPGS-KGGWVTIKDAVKKPL 213


>gi|330812075|ref|YP_004356537.1| 50S ribosomal protein L3 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380183|gb|AEA71533.1| 50S ribosomal protein L3 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 211

 Score =  273 bits (698), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 100/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR+++ +     G + +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEEGE--YQAGDLINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209


>gi|297181138|gb|ADI17335.1| hypothetical protein [uncultured Oceanospirillales bacterium
           HF0070_21F08]
          Length = 211

 Score =  273 bits (698), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 98/214 (45%), Positives = 130/214 (60%), Gaps = 3/214 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GV+ RK GMT V+  EG  +PVTV+ +   +V   +T + +GY AVQV  GE +   
Sbjct: 1   MAIGVIGRKCGMTRVFTEEGISVPVTVIEVTPNRVSQVKTEETDGYEAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP  G F+   V   +   EFR   +   L  GS  +   F  GQ VDVTG + GKGF
Sbjct: 61  VTKPQAGHFAKAGVEAGRSAGEFR--SEVGELQAGSEITLEVFEAGQSVDVTGTSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF    ATHG S+SHR+ GS G  Q PGRVFK KKM+G +G  RVTV+NLE+V
Sbjct: 119 AGTVKRWNFRTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMSGHLGAERVTVQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            VD ++ L+LVKG +PGA     ++VR + K+  
Sbjct: 179 RVDAEKNLLLVKGAIPGAAGGD-VIVRPAVKAKA 211


>gi|260589279|ref|ZP_05855192.1| 50S ribosomal protein L3 [Blautia hansenii DSM 20583]
 gi|331082685|ref|ZP_08331808.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 6_1_63FAA]
 gi|260540360|gb|EEX20929.1| 50S ribosomal protein L3 [Blautia hansenii DSM 20583]
 gi|330400304|gb|EGG79946.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 209

 Score =  273 bits (698), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 91/211 (43%), Positives = 125/211 (59%), Gaps = 5/211 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G   PVTVL    C V   +T+D +GY AVQVG G+ +   
Sbjct: 1   MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTMDNDGYEAVQVGFGDKRENI 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+G F    VS K+ + E +++ +     +G       F  G  +DVT  + GKGF
Sbjct: 61  VNKPMKGHFEKAGVSCKRFVRELKLEGE---YTLGQEIKADIFAAGDKIDVTATSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G   DP +VFK K+M G MG  RVTV+NLEVV
Sbjct: 118 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKRMPGHMGHVRVTVQNLEVV 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +  L+LVKG VPG KK S + ++++ K
Sbjct: 177 RVDAENNLLLVKGAVPGPKK-SLVTIKETVK 206


>gi|296447530|ref|ZP_06889452.1| 50S ribosomal protein L3 [Methylosinus trichosporium OB3b]
 gi|296254918|gb|EFH02023.1| 50S ribosomal protein L3 [Methylosinus trichosporium OB3b]
          Length = 237

 Score =  273 bits (698), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 137/219 (62%), Positives = 165/219 (75%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  +PVTVL LD CQVV HRT+++NGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKVGMTRVFTEAGEHVPVTVLKLDGCQVVAHRTMEQNGYTAVQLGIGRAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK  RG F+   V PK KL EFRV  + +LLPVG+  +  +F VGQ VDVTG ++GKGF
Sbjct: 61  VSKAERGRFAIAKVEPKLKLAEFRV-AESELLPVGAEITADHFVVGQFVDVTGTSLGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPG+ FKNKKMAG MG +RVT +NL VV
Sbjct: 120 AGAMKRWNFGGLRATHGVSVSHRSHGSTGGRQDPGKTFKNKKMAGHMGVDRVTTQNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
             D +RGL+LV+G VPG     WI VRD+ K A+  +  
Sbjct: 180 QTDVERGLLLVEGSVPG-HAGGWIFVRDAVKRALPAEAP 217


>gi|119468280|ref|ZP_01611406.1| 50S ribosomal subunit protein L3 [Alteromonadales bacterium TW-7]
 gi|119448273|gb|EAW29537.1| 50S ribosomal subunit protein L3 [Alteromonadales bacterium TW-7]
          Length = 211

 Score =  273 bits (698), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 92/212 (43%), Positives = 127/212 (59%), Gaps = 1/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+     ++   ++   +GY A+QV AG  K   
Sbjct: 1   MALGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRIAQIKSDATDGYNALQVTAGTKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+   V   + L+EFR+   +    VG+  +   F     VDVTG + GKGF
Sbjct: 61  VNKASAGHFAKAGVEAGRGLWEFRLNGGEGDFEVGAELTVELFNEINKVDVTGTSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG MG  RVT +NLE+V
Sbjct: 121 QGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGHMGAERVTTQNLELV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPG+     ++V+ + K+
Sbjct: 181 RVDAERNLLLVKGAVPGSIGGD-VIVKPAVKA 211


>gi|168018029|ref|XP_001761549.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687233|gb|EDQ73617.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 258

 Score =  273 bits (698), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 101/209 (48%), Positives = 143/209 (68%), Gaps = 2/209 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
            R+GV+A K GMT +++  G R+P+TVL +++  VV  +T + +G+ A+Q+GAG+ K K 
Sbjct: 13  FRTGVIAVKCGMTAIWDKWGARVPMTVLWVNDNHVVQVKTEETDGHFALQIGAGQRKPKQ 72

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP  G F +  V  K+ L EF V +D  LLP+G+  S  +F  GQ VD+ G+T GKGF
Sbjct: 73  LTKPELGHFRAAGVPLKQHLAEFPVTED-ALLPLGTELSVRHFRPGQYVDIAGITTGKGF 131

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G MKR  F G+ A+HG S+SHRS GSTG RQDPG+VFK KKMAG MG  R TVKN+ + 
Sbjct: 132 QGGMKRWGFAGMPASHGASLSHRSLGSTGGRQDPGKVFKGKKMAGHMGAVRRTVKNVWIY 191

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            ++ +R LI V+G VPG  K +++ +RD+
Sbjct: 192 KIEPERDLIWVRGQVPG-HKGNFVYIRDA 219


>gi|315125262|ref|YP_004067265.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas sp. SM9913]
 gi|315013775|gb|ADT67113.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas sp. SM9913]
          Length = 211

 Score =  273 bits (698), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 92/212 (43%), Positives = 128/212 (60%), Gaps = 1/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+     ++   ++   +GY A+QV AG  K   
Sbjct: 1   MALGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRIAQIKSDATDGYNALQVTAGTKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+   V   + L+EFR+   +    VG+  +   F     VDVTG + GKGF
Sbjct: 61  VNKATAGHFAKAGVEAGRGLWEFRLNGGEGDFEVGAELTVELFNEINKVDVTGTSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG+MG  +VT +NLE+V
Sbjct: 121 QGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNEQVTTQNLELV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA     ++V+ + K+
Sbjct: 181 RVDAERNLLLVKGAVPGAIGGD-VIVKPAVKA 211


>gi|28867854|ref|NP_790473.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213969214|ref|ZP_03397352.1| ribosomal protein L3 [Pseudomonas syringae pv. tomato T1]
 gi|301381721|ref|ZP_07230139.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tomato Max13]
 gi|302061079|ref|ZP_07252620.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tomato K40]
 gi|302130780|ref|ZP_07256770.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|42559621|sp|Q889X1|RL3_PSESM RecName: Full=50S ribosomal protein L3
 gi|28851090|gb|AAO54168.1| ribosomal protein L3 [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213925892|gb|EEB59449.1| ribosomal protein L3 [Pseudomonas syringae pv. tomato T1]
 gi|330879442|gb|EGH13591.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
 gi|330966911|gb|EGH67171.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 211

 Score =  273 bits (698), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 100/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR+++ +     G   +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEEGE--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209


>gi|237797432|ref|ZP_04585893.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|302189277|ref|ZP_07265950.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. syringae 642]
 gi|331020282|gb|EGI00339.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 211

 Score =  272 bits (697), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR+++ D     G   +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQTGDQINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209


>gi|254438817|ref|ZP_05052311.1| ribosomal protein L3 [Octadecabacter antarcticus 307]
 gi|198254263|gb|EDY78577.1| ribosomal protein L3 [Octadecabacter antarcticus 307]
          Length = 278

 Score =  272 bits (697), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 126/215 (58%), Positives = 162/215 (75%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSG++A+K+GMT ++  +GR+IPVTVL LD  QVV  RT +K+GY AVQ+GAG AK K 
Sbjct: 4   LRSGIIAKKVGMTRLFQEDGRQIPVTVLQLDKLQVVAQRTAEKDGYTAVQLGAGTAKAKR 63

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S PMRG F++  V PK+K+ EFRV ++ +L+PVG     S++  GQ VDV+G +IGKGF
Sbjct: 64  TSAPMRGHFAAAKVEPKRKVCEFRVSEE-NLIPVGEEIIASHYFEGQFVDVSGTSIGKGF 122

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNF GLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  ++T +NL V+
Sbjct: 123 AGAMKRHNFSGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAAKITTQNLVVI 182

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D  RGLI+VKG VPG+ K  W+ V+D+ K   +
Sbjct: 183 KTDPDRGLIMVKGAVPGS-KGGWVTVKDAVKKPAS 216


>gi|71736464|ref|YP_276706.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|109893538|sp|Q48D36|RL3_PSE14 RecName: Full=50S ribosomal protein L3
 gi|71557017|gb|AAZ36228.1| ribosomal protein L3 [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 211

 Score =  272 bits (697), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 100/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR+++ D     G   +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LE+V
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLELV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209


>gi|312963368|ref|ZP_07777851.1| 50S ribosomal protein L3 [Pseudomonas fluorescens WH6]
 gi|311282448|gb|EFQ61046.1| 50S ribosomal protein L3 [Pseudomonas fluorescens WH6]
          Length = 211

 Score =  272 bits (697), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR++  D     G + +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEDGD--YKAGDLINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209


>gi|332038837|gb|EGI75279.1| 50S ribosomal protein L3 [Pseudoalteromonas haloplanktis ANT/505]
          Length = 211

 Score =  272 bits (697), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 93/212 (43%), Positives = 127/212 (59%), Gaps = 1/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+     ++   ++   +GY A+QV AG  K   
Sbjct: 1   MALGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRIAQIKSDATDGYNALQVTAGTKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+   V   + L+EFR+   +    VG+  +   F     VDVTG + GKGF
Sbjct: 61  VNKAKAGHFAKAGVEAGRGLWEFRLNGGEGDFEVGAELTVELFNEINKVDVTGTSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG MG  RVT +NLE+V
Sbjct: 121 QGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGHMGAERVTTQNLELV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA     ++V+ + K+
Sbjct: 181 RVDAERNLLLVKGAVPGAIGGD-VIVKPAVKA 211


>gi|320322322|gb|EFW78416.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320331980|gb|EFW87916.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330879369|gb|EGH13518.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 211

 Score =  272 bits (697), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 101/212 (47%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR+++ D     G   +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV+ LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQALEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209


>gi|254283460|ref|ZP_04958428.1| ribosomal protein L3 [gamma proteobacterium NOR51-B]
 gi|219679663|gb|EED36012.1| ribosomal protein L3 [gamma proteobacterium NOR51-B]
          Length = 211

 Score =  272 bits (697), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 99/212 (46%), Positives = 129/212 (60%), Gaps = 1/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT V+  EG  +PVTV+ +   +V   + LD +GY A+QV AG+ K   
Sbjct: 1   MTIGVVGRKSGMTRVFTDEGVSVPVTVVEIAPNRVTQLKDLDTDGYRAIQVTAGDRKASK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS+   G F+   V+    L+EFR+   ++   +G+  +   F  GQ VDV G + GKGF
Sbjct: 61  VSRAEAGHFAKAGVAAGNGLWEFRLDGSEEQFEIGAELTVERFEQGQKVDVCGQSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR NF    ATHG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT + LEVV
Sbjct: 121 QGAVKRWNFRMQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQGLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA     ++V  + K 
Sbjct: 181 RVDVERNLLLIKGAVPGAPGGD-VIVLPAVKG 211


>gi|126724861|ref|ZP_01740704.1| 50S ribosomal protein L3 [Rhodobacterales bacterium HTCC2150]
 gi|126706025|gb|EBA05115.1| 50S ribosomal protein L3 [Rhodobacterales bacterium HTCC2150]
          Length = 244

 Score =  272 bits (696), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 126/220 (57%), Positives = 165/220 (75%), Gaps = 2/220 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT ++  +GR++PVTVL LDN QVV  RT +++GY AVQ+G G AK K 
Sbjct: 1   MRSGVIAKKVGMTRLFMEDGRQVPVTVLQLDNLQVVSQRTAERDGYTAVQLGTGLAKAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ MRG F++  V PK+K+ EFRV  + +++ VG   +  ++  GQ+VDV+G +IGKGF
Sbjct: 61  TSQAMRGHFAAAKVEPKRKVAEFRVAPE-NMINVGEEITADHYFEGQIVDVSGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NL+VV
Sbjct: 120 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
           S D  RGLI++KG VPG+ K  W+ ++D+ K       K+
Sbjct: 180 STDTDRGLIMIKGAVPGS-KGGWVTIKDAAKKPTPENVKL 218


>gi|39997949|ref|NP_953900.1| 50S ribosomal protein L3 [Geobacter sulfurreducens PCA]
 gi|42559575|sp|P60454|RL3_GEOSL RecName: Full=50S ribosomal protein L3
 gi|39984894|gb|AAR36250.1| ribosomal protein L3 [Geobacter sulfurreducens PCA]
 gi|298506888|gb|ADI85611.1| ribosomal protein L3 [Geobacter sulfurreducens KN400]
          Length = 210

 Score =  272 bits (696), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 96/212 (45%), Positives = 133/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++A+KLGMT ++  +G+RIPVTV+    C V+  +T   +GY A+QVG    + + 
Sbjct: 1   MKKGLIAKKLGMTQIFAEDGKRIPVTVVQAGPCVVLQKKTSATDGYDAIQVGFLSQEARK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM G   +        + EFR+  D D   VG V S   F VG+ +DVTG +IGKGF
Sbjct: 61  VTKPMLGHIKAAGQGAFAHIREFRLD-DVDRYNVGDVISADAFEVGEYIDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR  F G R++HG S  HR+ GS G    P RVFKNKKM G++G  RVTV+ L+VV
Sbjct: 120 QGVIKRWGFRGGRSSHG-SCFHRAPGSIGSSAYPSRVFKNKKMPGQLGNERVTVQRLQVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD    ++L+KG +PGA KN  +LV+D+ K 
Sbjct: 179 RVDAADNILLIKGAIPGA-KNGIVLVKDTVKP 209


>gi|23014088|ref|ZP_00053925.1| COG0087: Ribosomal protein L3 [Magnetospirillum magnetotacticum
           MS-1]
 gi|83312229|ref|YP_422493.1| 50S ribosomal protein L3 [Magnetospirillum magneticum AMB-1]
 gi|109893435|sp|Q2W2J1|RL3_MAGMM RecName: Full=50S ribosomal protein L3
 gi|82947070|dbj|BAE51934.1| Ribosomal protein L3 [Magnetospirillum magneticum AMB-1]
          Length = 229

 Score =  272 bits (696), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 134/215 (62%), Positives = 164/215 (76%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  +G  +PVTVL +D CQVV  R+++K+GY+AVQ+GAG AKVKN
Sbjct: 1   MRSGLIAQKVGMTRIFTEDGTHVPVTVLKVDTCQVVSTRSVEKDGYVAVQLGAGTAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKP R  F+   V PKKKL EFRV  + +LL VG+  S ++F  GQ VDVTG TIGKGF
Sbjct: 61  VSKPARANFAKAKVEPKKKLVEFRVAPE-NLLEVGTELSAAHFIPGQYVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NF GL ATHGVS+SHRSHGSTG RQDPG+VFK KKMAG MG  +VT +NL VV
Sbjct: 120 AGGMKRWNFRGLEATHGVSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDEQVTTQNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           S D  RGLILVKG VPG  + SW+LVRD+ K  + 
Sbjct: 180 STDADRGLILVKGSVPG-HEGSWVLVRDAVKRKLP 213


>gi|330988282|gb|EGH86385.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 211

 Score =  272 bits (696), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEEADGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR+++ D     G   +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209


>gi|217976767|ref|YP_002360914.1| 50S ribosomal protein L3 [Methylocella silvestris BL2]
 gi|254803683|sp|B8ELG3|RL3_METSB RecName: Full=50S ribosomal protein L3
 gi|217502143|gb|ACK49552.1| ribosomal protein L3 [Methylocella silvestris BL2]
          Length = 245

 Score =  272 bits (696), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 140/215 (65%), Positives = 164/215 (76%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT V+N  G  +PVTVL LD CQVV HRT ++NGY A+Q+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRVFNDGGEHVPVTVLKLDGCQVVAHRTKERNGYTALQLGIGRAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK  RG F+   V PK KL EFRV++  DLLPVG+  +  +F VGQ VDVTG +IGKGF
Sbjct: 61  VSKAERGRFAIAEVEPKLKLAEFRVEE-SDLLPVGAEITADHFVVGQFVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVS+SHRSHGSTG RQDPG+ FKNKKMAG MG  RVT  NL+VV
Sbjct: 120 AGPMKRWNFGGLRATHGVSLSHRSHGSTGGRQDPGKTFKNKKMAGHMGAERVTTLNLKVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            +D +RGLILV+G VPG     WI VRD+ K A+ 
Sbjct: 180 QLDIERGLILVEGAVPGVA-GGWIQVRDAIKRALP 213


>gi|89095538|ref|ZP_01168443.1| 50S ribosomal protein L3 [Oceanospirillum sp. MED92]
 gi|89080213|gb|EAR59480.1| 50S ribosomal protein L3 [Oceanospirillum sp. MED92]
          Length = 212

 Score =  272 bits (696), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 99/214 (46%), Positives = 135/214 (63%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK GMT V+N +G  +PVTV+ ++  +V   +T + +GY AVQV  G  K   
Sbjct: 1   MTVGLIGRKAGMTRVFNEDGVSVPVTVIEVEPNRVTAVKTEETDGYAAVQVTTGGKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SKP  G F+   V   + L+EFR+   D+ + VG   + + F  GQ VDVTG + GKGF
Sbjct: 61  LSKPEAGNFAKAGVEAGRGLWEFRLSGGDE-VNVGEELTVARFEAGQKVDVTGQSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF    ATHG S+SHR+ GS G  Q PGRV+K KKMAG+MG  RVTV+ LEVV
Sbjct: 120 QGGVKRWNFSMQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGQMGNERVTVQTLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            VD +R L+L+KG VPGA     ++V+ + K+  
Sbjct: 180 RVDAERNLLLIKGAVPGATGGD-VIVKPAVKAGA 212


>gi|326793558|ref|YP_004311378.1| 50S ribosomal protein L3 [Marinomonas mediterranea MMB-1]
 gi|326544322|gb|ADZ89542.1| 50S ribosomal protein L3 [Marinomonas mediterranea MMB-1]
          Length = 212

 Score =  272 bits (696), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 96/212 (45%), Positives = 133/212 (62%), Gaps = 1/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   +V RK GMT ++N +G  +PVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MAIQLVGRKAGMTRIFNEDGVSVPVTVIEVEPNRVTQVKTAETDGYSAVQVTVGERRANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+  NV   + L+EFR+   +  + VG   + + F     VDVTG + GKGF
Sbjct: 61  VNKAAAGHFAKANVEAGRGLWEFRLAGGEKEINVGDELTVADFESVTTVDVTGQSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRHNF    ATHG S+SHR+ GS G  Q PGRV+K KKMAG MG  +VT ++LEVV
Sbjct: 121 QGGIKRHNFSMQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGHMGAAQVTTQSLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R LILVKG VPGA  N  ++++ + K+
Sbjct: 181 RVDAERNLILVKGAVPGA-TNGDVVLQPAVKA 211


>gi|212634829|ref|YP_002311354.1| 50S ribosomal protein L3 [Shewanella piezotolerans WP3]
 gi|226730567|sp|B8CND3|RL3_SHEPW RecName: Full=50S ribosomal protein L3
 gi|212556313|gb|ACJ28767.1| Ribosomal protein L3 [Shewanella piezotolerans WP3]
          Length = 212

 Score =  272 bits (695), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++N +G  +PVTV+ +   +V   +TLD +GY A+QV  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFNEDGASVPVTVIEIAANRVTQVKTLDTDGYRALQVTTGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++KP  G F+   V   + L+E R+   D + + VG+  +   F     VDVTG + GKG
Sbjct: 61  ITKPEAGHFAKAGVEAGRGLWELRLADGDGEGIEVGAELNVDIFADIAKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF     THG S++HRS+GS G  Q PGRVFK KKM+G MG  RVT +NL++
Sbjct: 121 FQGGIKRWNFHAQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LVKG VPGA     I ++ + K+
Sbjct: 181 VRVDAERNLLLVKGAVPGATNGDLI-IKPAVKA 212


>gi|331018160|gb|EGH98216.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 211

 Score =  272 bits (695), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 99/212 (46%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR+++ +     G   +   F  GQLVDV G + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEEGE--YQAGDQINAEIFAAGQLVDVAGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209


>gi|290477192|ref|YP_003470107.1| 50S ribosomal subunit protein L3 [Xenorhabdus bovienii SS-2004]
 gi|289176540|emb|CBJ83349.1| 50S ribosomal subunit protein L3 [Xenorhabdus bovienii SS-2004]
          Length = 210

 Score =  272 bits (695), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 94/210 (44%), Positives = 132/210 (62%), Gaps = 1/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPV+V+ ++  ++   +  + +GY A+QV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVSVIEIEENRITQVKDQESDGYRAIQVTTGSKKANRVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L EFR+  DD+   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRTLREFRLSLDDEEYTVGQSISVEIFANVKKVDVTGTSKGKGFAG 121

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV V
Sbjct: 122 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRV 181

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 182 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 210


>gi|85703987|ref|ZP_01035090.1| 50S ribosomal protein L3 [Roseovarius sp. 217]
 gi|85671307|gb|EAQ26165.1| 50S ribosomal protein L3 [Roseovarius sp. 217]
          Length = 280

 Score =  272 bits (695), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 119/215 (55%), Positives = 161/215 (74%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSGV+A+K+GMT ++  +G+++PVTVL LD  QVV  RT +K+GY AVQ+GAG AK K 
Sbjct: 2   LRSGVIAKKVGMTRLFLEDGKQVPVTVLQLDKLQVVAQRTPEKDGYTAVQLGAGTAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            ++ MRG F++  V PK+K+ EFRV  + +++ VG   +  ++  GQ VDV+G +IGKGF
Sbjct: 62  TTQAMRGHFAAAKVEPKRKIAEFRVAPE-NMINVGEEITADHYFEGQFVDVSGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  +VT +NL+V+
Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAAKVTTQNLQVI 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D  RGLI++KG VPG+ K  W+ ++D+ K    
Sbjct: 181 KTDADRGLIMIKGAVPGS-KGGWVTIKDAVKKPFP 214


>gi|170723906|ref|YP_001751594.1| 50S ribosomal protein L3 [Pseudomonas putida W619]
 gi|226730552|sp|B1JDW4|RL3_PSEPW RecName: Full=50S ribosomal protein L3
 gi|169761909|gb|ACA75225.1| ribosomal protein L3 [Pseudomonas putida W619]
          Length = 211

 Score =  272 bits (695), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 101/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + ++EFR+++ +     G       FT GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRGVWEFRLEEGE--FQAGDSIKAELFTAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA     + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGDVV-VRPAVKA 209


>gi|162149174|ref|YP_001603635.1| 50S ribosomal protein L3 [Gluconacetobacter diazotrophicus PAl 5]
 gi|209545082|ref|YP_002277311.1| 50S ribosomal protein L3 [Gluconacetobacter diazotrophicus PAl 5]
 gi|189042847|sp|A9H3R5|RL3_GLUDA RecName: Full=50S ribosomal protein L3
 gi|161787751|emb|CAP57347.1| 50S ribosomal protein L3 [Gluconacetobacter diazotrophicus PAl 5]
 gi|209532759|gb|ACI52696.1| ribosomal protein L3 [Gluconacetobacter diazotrophicus PAl 5]
          Length = 227

 Score =  272 bits (695), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 132/219 (60%), Positives = 164/219 (74%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+KLGMT ++  +G  +PVTVLH+DN QVV  RT D++GY AVQ+G G AKVKN
Sbjct: 1   MRTGLIAKKLGMTRLFKEDGTHVPVTVLHVDNLQVVDVRTQDRDGYTAVQLGFGNAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKP RG F+ V V PKKKL EFRV  DD +L  G+  S ++F VGQ VDVT  + GKGF
Sbjct: 61  VSKPNRGHFARVKVEPKKKLAEFRV-ADDAVLEAGATLSAAHFVVGQKVDVTSTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NF GL A+HGVSISHRSHGSTG RQDPG+ FKNKKMAG +G  RVT  NLEV 
Sbjct: 120 AGAMKRWNFAGLEASHGVSISHRSHGSTGNRQDPGKTFKNKKMAGHLGSERVTTLNLEVA 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           +VD ++ L++V+G VPG  KN  +LVRD+ K A + +  
Sbjct: 180 AVDAEKNLLMVRGSVPGG-KNELVLVRDAIKKARHAEAP 217


>gi|254488658|ref|ZP_05101863.1| ribosomal protein L3 [Roseobacter sp. GAI101]
 gi|214045527|gb|EEB86165.1| ribosomal protein L3 [Roseobacter sp. GAI101]
          Length = 294

 Score =  271 bits (694), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 128/215 (59%), Positives = 159/215 (73%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSGV+A+K+GMT ++  +G++IPVTVL LD  QVV  RT +++GY AVQ+GAG AKVK 
Sbjct: 2   LRSGVIAKKMGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTTERDGYTAVQLGAGTAKVKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S PMRG F++  V PK+K+ EFRV  +  +L VG      ++  GQ VDV G +IGKGF
Sbjct: 62  TSAPMRGHFAAAKVEPKRKVAEFRVDPE-AMLNVGEEIIADHYFAGQYVDVAGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRATHGVS+SHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 121 AGAMKRHNFGGLRATHGVSVSHRSHGSTGQCQDPGKVFKGKKMAGHMGSARVTTQNLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D  RGLI+VKG VPG+ K  W+ V+D+ K    
Sbjct: 181 KTDTVRGLIMVKGAVPGS-KGGWVTVKDAVKKPFP 214


>gi|157960014|ref|YP_001500048.1| 50S ribosomal protein L3 [Shewanella pealeana ATCC 700345]
 gi|189029481|sp|A8GYX6|RL3_SHEPA RecName: Full=50S ribosomal protein L3
 gi|157845014|gb|ABV85513.1| ribosomal protein L3 [Shewanella pealeana ATCC 700345]
          Length = 212

 Score =  271 bits (694), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 94/213 (44%), Positives = 132/213 (61%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++N +G  +PVTV+ +   +V   RTLD +GY A+QV  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFNEDGASVPVTVIEIAANRVTQVRTLDTDGYRALQVTTGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++KP  G F+   V   + L+E R+   + + + VG+  +   F     VDVTG + GKG
Sbjct: 61  ITKPEAGHFAKAGVEAGRGLWEMRLADGEGEGIEVGAELNVDIFADIAKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S++HR++GS G  Q PGRVFK KKM+G MG  RVT +NLEV
Sbjct: 121 FQGGIKRWNFATQDATHGNSLAHRANGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           + VD +R L+LVKG VPGA     I ++ + K+
Sbjct: 181 IRVDAERNLLLVKGAVPGATNGDLI-IKPAVKA 212


>gi|260752974|ref|YP_003225867.1| 50S ribosomal protein L3 [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258552337|gb|ACV75283.1| ribosomal protein L3 [Zymomonas mobilis subsp. mobilis NCIMB 11163]
          Length = 242

 Score =  271 bits (694), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 126/219 (57%), Positives = 164/219 (74%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR +PVTVL L++ QVV  +  D++GY+AVQ+GAG AK KN
Sbjct: 1   MRTGVIAKKVGMTRLFQEDGRHVPVTVLKLEDVQVVAVKNKDQDGYVAVQLGAGSAKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP+RG F+   V  K KL EF V +D  +L VG+  S  +F  GQLVD++G T GKGF
Sbjct: 61  VTKPVRGHFAKAEVELKAKLVEFPVSED-AVLEVGTSISADHFIAGQLVDISGQTQGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR  FGGLRATHGVS+SHRSHGSTG RQDPGRVFKNKKMAG MG  + T +NLEV+
Sbjct: 120 AGAMKRWGFGGLRATHGVSLSHRSHGSTGNRQDPGRVFKNKKMAGHMGARQRTQQNLEVI 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           S D +R LI V+G VPG+ K +W+++RD+ K A   +  
Sbjct: 180 STDAERDLIFVRGSVPGS-KGAWLIIRDAVKVARPTEAP 217


>gi|83854978|ref|ZP_00948508.1| 50S ribosomal protein L3 [Sulfitobacter sp. NAS-14.1]
 gi|83842821|gb|EAP81988.1| 50S ribosomal protein L3 [Sulfitobacter sp. NAS-14.1]
          Length = 280

 Score =  271 bits (694), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 128/218 (58%), Positives = 158/218 (72%), Gaps = 2/218 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSGV+A+K+GMT ++  +G++IPVTVL LD  QVV  RT +K+GY AVQ+GAG AK K 
Sbjct: 2   LRSGVIAKKMGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTPEKDGYTAVQLGAGTAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ MRG F++  V PK+K+ EFRV  +  +L VG      ++  GQ VDV G +IGKGF
Sbjct: 62  TSQAMRGHFAAAKVEPKRKVAEFRVDPE-AMLNVGEEIIADHYFAGQYVDVAGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
             D  RGLI+VKG VPG+ K  W+ V+D+ K       
Sbjct: 181 KTDSARGLIMVKGAVPGS-KGGWVTVKDAVKKPFPADA 217


>gi|83941500|ref|ZP_00953962.1| 50S ribosomal protein L3 [Sulfitobacter sp. EE-36]
 gi|83847320|gb|EAP85195.1| 50S ribosomal protein L3 [Sulfitobacter sp. EE-36]
          Length = 280

 Score =  271 bits (694), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 128/218 (58%), Positives = 158/218 (72%), Gaps = 2/218 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSGV+A+K+GMT ++  +G++IPVTVL LD  QVV  RT +K+GY AVQ+GAG AK K 
Sbjct: 2   LRSGVIAKKMGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTPEKDGYTAVQLGAGTAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ MRG F++  V PK+K+ EFRV  +  +L VG      ++  GQ VDV G +IGKGF
Sbjct: 62  TSQAMRGHFAAAKVEPKRKVAEFRVDPE-AMLNVGEEIIADHYFAGQYVDVAGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
             D  RGLI+VKG VPG+ K  W+ V+D+ K       
Sbjct: 181 KTDSARGLIMVKGAVPGS-KGGWVTVKDAVKKPFPADA 217


>gi|289209329|ref|YP_003461395.1| 50S ribosomal protein L3 [Thioalkalivibrio sp. K90mix]
 gi|288944960|gb|ADC72659.1| 50S ribosomal protein L3 [Thioalkalivibrio sp. K90mix]
          Length = 214

 Score =  271 bits (694), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 102/213 (47%), Positives = 142/213 (66%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RKLGM+ V+  +G  +PVTVL +DN +VV  +  + +GY AVQV AG  K   
Sbjct: 1   MAIGLIGRKLGMSRVFTDDGVSVPVTVLQVDNNRVVQIKRSEGDGYNAVQVTAGARKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           VSKP  G +++ +V P + L+EFRV+ D+ + L  G   +   F  GQ+VDVT  + GKG
Sbjct: 61  VSKPEAGHYAAASVEPGRGLWEFRVEADELEGLAPGDAITVDRFEEGQVVDVTSQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F GA+KRHNF    ATHG S++HR+ GS G  Q PGRVFK KKMAG MG  R T++NL+V
Sbjct: 121 FQGAVKRHNFRTQDATHGNSLAHRAPGSIGQNQSPGRVFKGKKMAGHMGAERKTIQNLKV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD  R L+L++G VPGA  ++ +++R + K+
Sbjct: 181 VRVDADRSLVLIQGAVPGAP-STDVMIRPAVKA 212


>gi|254461019|ref|ZP_05074435.1| ribosomal protein L3 [Rhodobacterales bacterium HTCC2083]
 gi|206677608|gb|EDZ42095.1| ribosomal protein L3 [Rhodobacteraceae bacterium HTCC2083]
          Length = 241

 Score =  271 bits (694), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 130/215 (60%), Positives = 162/215 (75%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  +G+ IPVTVL LD  QVV  RT DK+GY AVQ+GAG AK K 
Sbjct: 1   MRSGIIAKKVGMTRLFMEDGKAIPVTVLQLDALQVVAQRTSDKDGYTAVQLGAGTAKAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ MRG F++  V+PK+K+ EFRV +D +L+ VG   S  ++  GQ VDV+G +IGKGF
Sbjct: 61  TSQAMRGHFAAAKVAPKRKVAEFRVSED-NLINVGEEISAEHYLEGQKVDVSGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GAMKRHNFGGLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 120 QGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D  RGLI++KG VPG+ K  W+ V+D+ K  + 
Sbjct: 180 KTDADRGLIMIKGAVPGS-KGGWVTVKDAVKKKMP 213


>gi|167626039|ref|YP_001676333.1| 50S ribosomal protein L3 [Shewanella halifaxensis HAW-EB4]
 gi|189029480|sp|B0TM12|RL3_SHEHH RecName: Full=50S ribosomal protein L3
 gi|167356061|gb|ABZ78674.1| ribosomal protein L3 [Shewanella halifaxensis HAW-EB4]
          Length = 212

 Score =  271 bits (694), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 95/213 (44%), Positives = 132/213 (61%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++N +G  +PVTV+ +   +V   RTLD +GY A+QV  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFNEDGASVPVTVIEIAANRVTQVRTLDTDGYRALQVTTGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++KP  G F+   V   + L+E R+   + + + VG+  +   F     VDVTG + GKG
Sbjct: 61  ITKPEAGHFAKAGVEAGRGLWEMRLADGEGEGIEVGAELNVDIFADIAKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S++HRS+GS G  Q PGRVFK KKM+G MG  RVT +NLEV
Sbjct: 121 FQGGIKRWNFAMQDATHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           + VD +R L+LVKG VPGA     I ++ + K+
Sbjct: 181 IRVDAERNLLLVKGAVPGATNGDLI-IKPAVKA 212


>gi|77461300|ref|YP_350807.1| 50S ribosomal protein L3 [Pseudomonas fluorescens Pf0-1]
 gi|109893541|sp|Q3K5Y8|RL3_PSEPF RecName: Full=50S ribosomal protein L3
 gi|77385303|gb|ABA76816.1| 50S ribosomal protein L3 [Pseudomonas fluorescens Pf0-1]
          Length = 211

 Score =  271 bits (694), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 100/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKAGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR+++ +     G + +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEEGE--YQAGDLINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209


>gi|92112554|ref|YP_572482.1| 50S ribosomal protein L3P [Chromohalobacter salexigens DSM 3043]
 gi|123387627|sp|Q1R0H5|RL3_CHRSD RecName: Full=50S ribosomal protein L3
 gi|91795644|gb|ABE57783.1| LSU ribosomal protein L3P [Chromohalobacter salexigens DSM 3043]
          Length = 212

 Score =  271 bits (694), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 94/212 (44%), Positives = 136/212 (64%), Gaps = 1/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V +K GMT ++   G  +PVTV+ ++  +V   +T++ +GY AVQV +G  K K+
Sbjct: 1   MTIGLVGKKSGMTRIFTENGASVPVTVIEVEPNRVTRVKTVESDGYSAVQVTSGSRKAKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++K   G ++   V   + L EFR+ + ++   VG   + S F  GQ VDVTG + GKGF
Sbjct: 61  LTKAAAGQYAKSGVEAGRSLMEFRLAEGEEAPEVGGNITVSLFEAGQKVDVTGTSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR NF      HG S++HR+ GS G  Q PGRVFK KKMAG++G  RVTV++LE+V
Sbjct: 121 QGAVKRWNFRTQDNGHGNSLAHRAPGSIGQCQTPGRVFKGKKMAGQLGNERVTVQSLEIV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA  +  ++VR + K+
Sbjct: 181 RVDAERNLLLVKGAVPGA-TDCEVIVRSAVKA 211


>gi|300721365|ref|YP_003710636.1| 50S ribosomal subunit protein L3 [Xenorhabdus nematophila ATCC
           19061]
 gi|297627853|emb|CBJ88399.1| 50S ribosomal subunit protein L3 [Xenorhabdus nematophila ATCC
           19061]
          Length = 210

 Score =  271 bits (693), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 132/210 (62%), Gaps = 1/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++N +V   +  + +GY A+QV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKNDETDGYRAIQVTTGSKKANRVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F+   V   + L EFR+ + D    VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KSEAGHFAKAGVEAGRILREFRLSEGDAEFTVGQSISVEIFADVKKVDVTGTSKGKGFAG 121

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 122 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 181

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA  NS ++V+ + K+
Sbjct: 182 DAERNLLLVKGAVPGA-TNSNLIVKPAVKA 210


>gi|167039520|ref|YP_001662505.1| 50S ribosomal protein L3 [Thermoanaerobacter sp. X514]
 gi|300915229|ref|ZP_07132544.1| 50S ribosomal protein L3 [Thermoanaerobacter sp. X561]
 gi|307725153|ref|YP_003904904.1| 50S ribosomal protein L3 [Thermoanaerobacter sp. X513]
 gi|226730583|sp|B0K5P3|RL3_THEPX RecName: Full=50S ribosomal protein L3
 gi|166853760|gb|ABY92169.1| ribosomal protein L3 [Thermoanaerobacter sp. X514]
 gi|300888953|gb|EFK84100.1| 50S ribosomal protein L3 [Thermoanaerobacter sp. X561]
 gi|307582214|gb|ADN55613.1| 50S ribosomal protein L3 [Thermoanaerobacter sp. X513]
          Length = 210

 Score =  271 bits (693), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 95/212 (44%), Positives = 129/212 (60%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ RK GMT +++ +G  IPVTV+    C VV  +T++ +GY A+QVG G+ K K 
Sbjct: 1   MKKGILGRKHGMTQIFDEKGEVIPVTVIEAGPCVVVQKKTVETDGYNAIQVGFGDVKEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+ G F    V  K+ L EFR+  D     VGS      F  G  V+VTG++ GKGF
Sbjct: 61  LTKPLIGHFKKAGVPFKRYLREFRLD-DISGYEVGSEIKVDIFKPGDRVNVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR+       +HG S  HR  GS     DPGR FK K M G MG  RVT++NLEVV
Sbjct: 120 AGVVKRYGANRGPMSHG-SKYHRRVGSMSATTDPGRTFKGKIMPGHMGHERVTIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  L+LVKG VPG  K S ++++DS KS
Sbjct: 179 KVDPELNLLLVKGSVPGP-KGSLLIIKDSVKS 209


>gi|170738703|ref|YP_001767358.1| 50S ribosomal protein L3 [Methylobacterium sp. 4-46]
 gi|226730536|sp|B0UHW9|RL3_METS4 RecName: Full=50S ribosomal protein L3
 gi|168192977|gb|ACA14924.1| ribosomal protein L3 [Methylobacterium sp. 4-46]
          Length = 246

 Score =  271 bits (693), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 133/220 (60%), Positives = 162/220 (73%), Gaps = 2/220 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  +PVTVL +D CQVV HRT++KNGY+A+QVG G+AKVKN
Sbjct: 1   MRSGVIAQKVGMTRVFTDAGEHVPVTVLKVDQCQVVAHRTVEKNGYVALQVGVGKAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK  RG F+   V PK+KL EFRV +D  L+PVG+  +  +F  GQ VDVTG T GKGF
Sbjct: 61  VSKAERGRFAIAKVEPKRKLAEFRVTED-ALIPVGAEITADHFIPGQFVDVTGTTTGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G  RVT +NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
             D +RGLILV+G VPG     WI +RD+ K  +  +  +
Sbjct: 180 RTDPERGLILVEGAVPGVA-GGWIQIRDAVKRKLPAEAPM 218


>gi|167645578|ref|YP_001683241.1| 50S ribosomal protein L3 [Caulobacter sp. K31]
 gi|189042835|sp|B0T2C2|RL3_CAUSK RecName: Full=50S ribosomal protein L3
 gi|167348008|gb|ABZ70743.1| ribosomal protein L3 [Caulobacter sp. K31]
          Length = 256

 Score =  271 bits (693), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 120/215 (55%), Positives = 155/215 (72%), Gaps = 2/215 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GV+A+KLGMT  ++  G+ +PVTVL LD CQV   RT++K+GY A+Q+GAG  K KN 
Sbjct: 7   RTGVIAKKLGMTRFFDETGQHVPVTVLSLDGCQVTAQRTVEKDGYTALQLGAGAKKPKNT 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
              MRG F+  +V PK+ + EFRV +   L+ VG+ F+  ++  GQ VD+ G+T+GKGF+
Sbjct: 67  PNAMRGHFAKNSVEPKRIVAEFRVDE-AALIEVGAEFTADHYVAGQKVDIQGITVGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           GAMKR NF GLRATHGVS+SHRSHGSTG RQDPGR FK KKMAG +G   VT  N+ V  
Sbjct: 126 GAMKRWNFSGLRATHGVSVSHRSHGSTGQRQDPGRTFKGKKMAGHLGQETVTTLNVTVWK 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           VD +RGLILVKG VPG++  S++ VRD+ K A   
Sbjct: 186 VDVERGLILVKGAVPGSE-GSYVKVRDAIKKAAPA 219


>gi|114771269|ref|ZP_01448689.1| 50S ribosomal protein L3 [alpha proteobacterium HTCC2255]
 gi|114548194|gb|EAU51081.1| 50S ribosomal protein L3 [alpha proteobacterium HTCC2255]
          Length = 247

 Score =  271 bits (693), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 126/215 (58%), Positives = 159/215 (73%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT ++  +G+++PVTVL ++N QVV  RT + +GY AVQ+GAG AK K 
Sbjct: 1   MRSGVIAKKIGMTRLFMEDGKQVPVTVLQMENLQVVSQRTNETDGYTAVQLGAGVAKAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S  MRG F+   V PK+K+ EFRV  D +L+ VG     ++F  GQ VDV+G +IGKGF
Sbjct: 61  QSAAMRGHFAKAKVEPKRKIAEFRVSAD-NLIEVGEEIVANHFLDGQKVDVSGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRATHGVS+SHRSHGSTG  Q+PG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRHNFGGLRATHGVSVSHRSHGSTGQCQEPGKVFKGKKMAGHMGSARVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D  RGLI++KG VPG+ K  W+ V+DS K    
Sbjct: 180 RTDIDRGLIMIKGAVPGS-KGGWVTVKDSVKKKAP 213


>gi|157377449|ref|YP_001476049.1| 50S ribosomal protein L3 [Shewanella sediminis HAW-EB3]
 gi|189029482|sp|A8G1E8|RL3_SHESH RecName: Full=50S ribosomal protein L3
 gi|157319823|gb|ABV38921.1| ribosomal protein L3 [Shewanella sediminis HAW-EB3]
          Length = 212

 Score =  271 bits (693), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 92/213 (43%), Positives = 132/213 (61%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  IPVTV+ + + +V   +TL+ +GY A+QV  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFAEDGVSIPVTVIEIASNRVTQVKTLETDGYRALQVTTGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++KP  G F+   V   + L+E R+   + + + VG+  +   F     VDVTG + GKG
Sbjct: 61  ITKPEAGHFAKAGVEAGRGLWEVRLADGEGESIEVGAELNVDIFADVAKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF     THG S++HRS+GS G  Q PGRVFK KKM+G MG  RVT +NL+V
Sbjct: 121 FQGGIKRWNFHAQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LVKG VPGA   + I ++ + K+
Sbjct: 181 VRVDAERNLLLVKGAVPGATNGNLI-IKPAVKA 212


>gi|87122971|ref|ZP_01078832.1| 50S ribosomal subunit protein L3 [Marinomonas sp. MED121]
 gi|86161739|gb|EAQ63043.1| 50S ribosomal subunit protein L3 [Marinomonas sp. MED121]
          Length = 212

 Score =  271 bits (693), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 95/212 (44%), Positives = 132/212 (62%), Gaps = 1/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   +V RK GMT ++N +G  +PVTV+ ++  +V   +T D +GY AVQV  G  +   
Sbjct: 1   MAIQLVGRKAGMTRIFNEDGVSVPVTVIEVEPNRVTQVKTADTDGYTAVQVTVGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+   V   + L+EFR+  D+  + VG   + + F     VDV G + GKGF
Sbjct: 61  VNKAAAGHFAKAKVEAGRGLWEFRLSGDEKEINVGDELTVADFESIATVDVIGQSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRHNF    ATHG S+SHR+ GS G  Q PGRV+K KKMAG MG  +VT ++LEVV
Sbjct: 121 QGAIKRHNFSMQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGHMGAAQVTTQSLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R LI+VKG VPGA  N  ++++ + K+
Sbjct: 181 RVDLERNLIIVKGAVPGA-TNGDVILQPAVKA 211


>gi|104779755|ref|YP_606253.1| 50S ribosomal protein L3 [Pseudomonas entomophila L48]
 gi|123079277|sp|Q1IFW6|RL3_PSEE4 RecName: Full=50S ribosomal protein L3
 gi|95108742|emb|CAK13436.1| 50S ribosomal subunit protein L3 [Pseudomonas entomophila L48]
          Length = 211

 Score =  270 bits (692), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 101/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKAGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + ++EFR+++ D     G +     FT GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRGVWEFRLEEGD--FQAGDLIKAELFTAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA     + VR + K+
Sbjct: 179 RVDAERNLLLIKGAVPGATGGDVV-VRPAVKA 209


>gi|289623849|ref|ZP_06456803.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|330869431|gb|EGH04140.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 211

 Score =  270 bits (692), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 101/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  IPVTV+ +++ +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIESNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR+++ D     G   +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209


>gi|56551413|ref|YP_162252.1| 50S ribosomal protein L3 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241761060|ref|ZP_04759149.1| ribosomal protein L3 [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|81820917|sp|Q5NQ64|RL3_ZYMMO RecName: Full=50S ribosomal protein L3
 gi|56542987|gb|AAV89141.1| ribosomal protein L3 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241374679|gb|EER64140.1| ribosomal protein L3 [Zymomonas mobilis subsp. mobilis ATCC 10988]
          Length = 242

 Score =  270 bits (692), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 126/219 (57%), Positives = 163/219 (74%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR +PVTVL L++ QVV  +  D++GY+AVQ+GAG AK KN
Sbjct: 1   MRTGVIAKKVGMTRLFQEDGRHVPVTVLKLEDVQVVAVKNKDQDGYVAVQLGAGSAKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP+RG F+   V  K KL EF V +D  +L VG+  S  +F  GQLVD++G T GKGF
Sbjct: 61  VTKPVRGHFAKAEVELKAKLVEFPVSED-AVLEVGTSISADHFIAGQLVDISGQTQGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR  FGGLRATHGVS+SHRSHGSTG RQDPGRVFKNKKMAG MG  + T +NLEV+
Sbjct: 120 AGAMKRWGFGGLRATHGVSLSHRSHGSTGNRQDPGRVFKNKKMAGHMGARQRTQQNLEVI 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           S D +R LI V+G VPG+ K +W+++RD+ K A      
Sbjct: 180 STDAERDLIFVRGSVPGS-KGAWLIIRDAVKVARPTDAP 217


>gi|99080087|ref|YP_612241.1| 50S ribosomal protein L3 [Ruegeria sp. TM1040]
 gi|123077810|sp|Q1GK37|RL3_SILST RecName: Full=50S ribosomal protein L3
 gi|99036367|gb|ABF62979.1| LSU ribosomal protein L3P [Ruegeria sp. TM1040]
          Length = 239

 Score =  270 bits (692), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 133/215 (61%), Positives = 161/215 (74%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  +G++IPVTVL LD  QVV  RT DK+GY AVQ+GAG AKVK 
Sbjct: 1   MRSGIIAKKVGMTRLFMEDGKQIPVTVLSLDGLQVVAQRTEDKDGYTAVQLGAGSAKVKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK MRG F++  V PK+KL EFRV   D L+ VG+  S  +F  GQ VDVTG +IGKGF
Sbjct: 61  VSKAMRGHFAASKVEPKRKLVEFRV-PADGLIEVGAEISAEHFLEGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D  RGL+ +KG VPG  K+ W+ V+D+ K    
Sbjct: 180 KTDADRGLVFIKGAVPGP-KSGWVTVKDAVKKKAP 213


>gi|197104696|ref|YP_002130073.1| 50S ribosomal protein L3 [Phenylobacterium zucineum HLK1]
 gi|226730544|sp|B4R8L7|RL3_PHEZH RecName: Full=50S ribosomal protein L3
 gi|196478116|gb|ACG77644.1| 50S ribosomal protein L3 [Phenylobacterium zucineum HLK1]
          Length = 261

 Score =  270 bits (692), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 125/219 (57%), Positives = 158/219 (72%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+KLGM   ++  G  +PVTVL L+ CQVV HRT DK+GY+A+Q+GAG  K KN
Sbjct: 1   MRTGVIAKKLGMARFFDEAGVHVPVTVLSLEGCQVVAHRTKDKDGYVALQLGAGSKKPKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK +RG F+   V PK KL EF+V +D +L+ VG+  +  +F  GQ VD+TG T+GKGF
Sbjct: 61  TSKGLRGHFAKGQVEPKAKLVEFKVSED-NLIDVGAELTADHFVPGQKVDITGTTVGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F  KKMAG  G   VT  NL V 
Sbjct: 120 AGAMKRWNFGGLRATHGVSVSHRSHGSTGQRQDPGRTFPGKKMAGHYGQETVTTLNLTVW 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            VD +RGLILVKG VPG +  +++ +RD+ K+A+     
Sbjct: 180 RVDAERGLILVKGAVPGTE-GTFVKIRDAVKAALPADAP 217


>gi|254483423|ref|ZP_05096652.1| ribosomal protein L3 [marine gamma proteobacterium HTCC2148]
 gi|214036297|gb|EEB76975.1| ribosomal protein L3 [marine gamma proteobacterium HTCC2148]
          Length = 211

 Score =  270 bits (692), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 100/212 (47%), Positives = 130/212 (61%), Gaps = 1/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT V+  +G  IPVTV+ +   +V   + L+ +GY A+QV  G  K   
Sbjct: 1   MAIGLVGRKSGMTRVFTEDGASIPVTVVEVSPNRVTQIKELETDGYRAIQVTTGNRKASK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK   G F+   V    KL EFR++  D+   VG   +   F VGQ+VDVTG + GKGF
Sbjct: 61  VSKSEAGHFAKAGVEAGTKLSEFRLEASDEAPEVGVELTVERFEVGQIVDVTGKSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF    ATHG SISHR++GS G  Q PGRVFK KKM+G MG  +VT + LEV+
Sbjct: 121 QGGIKRWNFTMQDATHGNSISHRANGSIGQCQTPGRVFKGKKMSGHMGSEQVTTQGLEVI 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA     + VR + K+
Sbjct: 181 RVDAERNLLLIKGAVPGAPGGDVV-VRPTVKA 211


>gi|163752594|ref|ZP_02159773.1| ribosomal protein L3 [Shewanella benthica KT99]
 gi|161327506|gb|EDP98713.1| ribosomal protein L3 [Shewanella benthica KT99]
          Length = 212

 Score =  270 bits (692), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 92/213 (43%), Positives = 133/213 (62%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  +PVTV+ + + +V   +TL+ +GY A+QV  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFCEDGVSVPVTVIEITSNRVTQVKTLETDGYRALQVTTGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++KP  G F+   V   + L+E R+  D+ + + VG+  +   F     VDVTG + GKG
Sbjct: 61  ITKPEAGHFAKAGVEAGRGLWEVRLADDEGEGIEVGAELNVDIFADIAKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF     THG S+SHRS+GS G  Q PGRVFK KKM+G MG  RVT +NL+V
Sbjct: 121 FQGGIKRWNFHAQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           + VD +R L+LVKG VPGA   + I ++ + K+
Sbjct: 181 IRVDAERNLLLVKGAVPGAINGNLI-IKPAVKA 212


>gi|294085958|ref|YP_003552718.1| 50S ribosomal protein L3 [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292665533|gb|ADE40634.1| 50S ribosomal protein L3 [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 275

 Score =  270 bits (692), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 134/212 (63%), Positives = 160/212 (75%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++ARKLGMT V+N  G  +PVTVL +D+ QVV  R    +GY AVQ+GAG AK KN
Sbjct: 1   MRSGIIARKLGMTRVFNEAGHHVPVTVLKMDDVQVVSVRNKQVDGYTAVQLGAGMAKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKPMRG F+  NV PK KL EFRV  DD +L VG+   PS+F  GQ VDV G T GKGF
Sbjct: 61  VSKPMRGHFAKANVLPKSKLVEFRVS-DDAVLDVGATLVPSHFVAGQKVDVVGTTQGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNF GLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  R T +N+EVV
Sbjct: 120 AGAMKRHNFAGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRNTTQNIEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +VDD+ G++L+ G VPG  KN W+L+ D+ K+
Sbjct: 180 AVDDEEGVVLLCGAVPGP-KNGWVLISDAIKA 210


>gi|49475794|ref|YP_033835.1| 50S ribosomal protein L3 [Bartonella henselae str. Houston-1]
 gi|81827700|sp|Q6G2W5|RL3_BARHE RecName: Full=50S ribosomal protein L3
 gi|49238601|emb|CAF27842.1| 50S ribosomal protein l3 [Bartonella henselae str. Houston-1]
          Length = 246

 Score =  270 bits (692), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 133/219 (60%), Positives = 164/219 (74%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT +YN  G  +PVTVL L+NCQVV  RT++KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLENCQVVAQRTVEKNGYTAVQLGVGFAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ +RG F+  +V PK K+ EFRV  D +LL +G+  +  +F  GQ VDVTG TIGKGF
Sbjct: 61  TSQALRGHFAKASVEPKAKIAEFRVSPD-NLLDIGTEITAEHFVPGQRVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HR+HGSTG  QDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNIEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           S D +RGLILV+G V G+ K +WILVRD+ K  +     
Sbjct: 180 STDVERGLILVRGAVSGS-KGAWILVRDAIKKPLPDNAP 217


>gi|212288598|sp|A5V602|RL3_SPHWW RecName: Full=50S ribosomal protein L3
          Length = 251

 Score =  270 bits (692), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 125/215 (58%), Positives = 156/215 (72%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR +PVTVL L+N QVV  R  D++GY+AVQ+GAG AK KN
Sbjct: 1   MRTGVIAKKMGMTRLFQEDGRHVPVTVLALENVQVVARREQDRDGYVAVQLGAGSAKPKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP RG F    V PK  + EFRV +D  LL VG+  S  ++  GQ VD+ G T GKGF
Sbjct: 61  LTKPERGHFGKAEVEPKAFVAEFRVSED-GLLDVGAEISADHYVAGQFVDIQGSTQGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR  FGGLRATHGVS+SHRS GSTG RQDPG+VFKNKKMAG MG    T +NLE+V
Sbjct: 120 AGGMKRWGFGGLRATHGVSVSHRSLGSTGQRQDPGKVFKNKKMAGHMGDKNRTQQNLEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D +RGL+ VKG VPG+ K  W+LV+DS K A  
Sbjct: 180 QTDAERGLLFVKGSVPGS-KGGWLLVKDSVKIAAP 213


>gi|225024790|ref|ZP_03713982.1| hypothetical protein EIKCOROL_01677 [Eikenella corrodens ATCC
           23834]
 gi|224942497|gb|EEG23706.1| hypothetical protein EIKCOROL_01677 [Eikenella corrodens ATCC
           23834]
          Length = 214

 Score =  270 bits (692), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 101/212 (47%), Positives = 131/212 (61%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V+  +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFTEQGVSVPVTVLEMSPNRVTQVKSKDTDGYAAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++    L VG   + + F  GQ VDVTG + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLHEFALTEEKLAELKVGDEVTVAIFEAGQFVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRHNFG  RA+HG S SHR  GS G  QDPGRVF  K+MAG+ G    TV+ LEV
Sbjct: 121 FAGTIKRHNFGAQRASHGNSRSHRVPGSIGMNQDPGRVFPGKRMAGQYGNTTATVQRLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPGA  N  ++VR S K
Sbjct: 181 VRVDAERNLLLVKGAVPGAA-NGDVVVRPSVK 211


>gi|330940885|gb|EGH43842.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 211

 Score =  270 bits (692), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 100/212 (47%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG  I VTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1   MTIGVVGRKCGMTRIFTEEGVSIAVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+    G F+  NV+  + + EFR+++ D     G   +   F  GQLVDVTG + GKGF
Sbjct: 61  VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA   + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209


>gi|127511092|ref|YP_001092289.1| 50S ribosomal protein L3 [Shewanella loihica PV-4]
 gi|166234593|sp|A3Q982|RL3_SHELP RecName: Full=50S ribosomal protein L3
 gi|126636387|gb|ABO22030.1| LSU ribosomal protein L3P [Shewanella loihica PV-4]
          Length = 212

 Score =  270 bits (692), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 91/213 (42%), Positives = 131/213 (61%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  IPVTV+ +   +V   +TL+ +GY A+Q+  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFTEDGASIPVTVIEIAANRVAQVKTLETDGYRALQITTGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++KP  G F+   V   + L+E R+   + + + VG+  +   F     VDVTG + GKG
Sbjct: 61  ITKPEAGHFAKAGVEAGRGLWEMRLADGEGEGIEVGAELNVDIFADVAKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S++HR++GS G  Q PGRVFK KKM+G MG  RVT +NL+V
Sbjct: 121 FQGGIKRWNFRTQDATHGNSLAHRANGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LVKG VPGA     I ++ + K+
Sbjct: 181 VRVDAERNLLLVKGAVPGATNGDLI-IKPAVKA 212


>gi|212288260|sp|A8IAS6|RL3_AZOC5 RecName: Full=50S ribosomal protein L3
          Length = 241

 Score =  270 bits (692), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 133/219 (60%), Positives = 162/219 (73%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT ++   G  +PVTVL +++CQVV HRTLDKNGY+AVQ+GAG+ K KN
Sbjct: 1   MRSGVIAQKLGMTRIFTDAGEHLPVTVLKVESCQVVAHRTLDKNGYVAVQLGAGKRKPKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +K  RG F+   V PK+KL EFRV  D  L+PVG+  +  +F VGQ VDVTG TIGKGF
Sbjct: 61  TNKAERGQFARAEVEPKRKLAEFRVDAD-ALIPVGAEITADHFVVGQYVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGGLRA+HGVSISHRS GSTG RQDPG+ FKNKKM G MG   VT +NL+VV
Sbjct: 120 AGGMKRHNFGGLRASHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGDVTVTTQNLKVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
             D +RGLI V+G VPG     WI+VRD+ K  +  +  
Sbjct: 180 MTDVERGLIAVEGAVPG-HAGGWIMVRDAVKKRLPSEAP 217


>gi|158424178|ref|YP_001525470.1| 50S ribosomal protein L3 [Azorhizobium caulinodans ORS 571]
 gi|158331067|dbj|BAF88552.1| ribosomal protein L3 [Azorhizobium caulinodans ORS 571]
          Length = 248

 Score =  270 bits (691), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 133/219 (60%), Positives = 162/219 (73%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT ++   G  +PVTVL +++CQVV HRTLDKNGY+AVQ+GAG+ K KN
Sbjct: 8   MRSGVIAQKLGMTRIFTDAGEHLPVTVLKVESCQVVAHRTLDKNGYVAVQLGAGKRKPKN 67

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +K  RG F+   V PK+KL EFRV  D  L+PVG+  +  +F VGQ VDVTG TIGKGF
Sbjct: 68  TNKAERGQFARAEVEPKRKLAEFRVDAD-ALIPVGAEITADHFVVGQYVDVTGTTIGKGF 126

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGGLRA+HGVSISHRS GSTG RQDPG+ FKNKKM G MG   VT +NL+VV
Sbjct: 127 AGGMKRHNFGGLRASHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGDVTVTTQNLKVV 186

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
             D +RGLI V+G VPG     WI+VRD+ K  +  +  
Sbjct: 187 MTDVERGLIAVEGAVPG-HAGGWIMVRDAVKKRLPSEAP 224


>gi|85713373|ref|ZP_01044382.1| Ribosomal protein L3 [Idiomarina baltica OS145]
 gi|85692801|gb|EAQ30790.1| Ribosomal protein L3 [Idiomarina baltica OS145]
          Length = 212

 Score =  270 bits (691), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 95/213 (44%), Positives = 136/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V+  +G  +PVTV+ +   +V   +T + +GY A+QV  GE K   
Sbjct: 1   MAIGLVGRKVGMTRVFQEDGASVPVTVIEVLANRVTQVKTEETDGYRALQVTTGEKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP  G F+  +    + L+EFR++  + D   VGS  +   F+  + VDVTG + GKG
Sbjct: 61  VNKPSAGHFAKASSEAGRGLWEFRLEDGEGDDFAVGSEITVEVFSEIKKVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG+MG  RVT ++LE+
Sbjct: 121 FAGTVKRWNFRTQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNERVTTQSLEL 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+L+KG VPGA     ++V+ + K+
Sbjct: 181 VRVDAERNLLLIKGAVPGATGGD-VIVKPAVKA 212


>gi|218530394|ref|YP_002421210.1| 50S ribosomal protein L3 [Methylobacterium chloromethanicum CM4]
 gi|254803680|sp|B7L0R1|RL3_METC4 RecName: Full=50S ribosomal protein L3
 gi|218522697|gb|ACK83282.1| ribosomal protein L3 [Methylobacterium chloromethanicum CM4]
          Length = 246

 Score =  270 bits (691), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 134/216 (62%), Positives = 160/216 (74%), Gaps = 2/216 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+ARK+GMT V+   G  +PVTVL +D CQVV HRT +K+GY+A+QVG G+AKVKN
Sbjct: 1   MRSGVIARKVGMTRVFTDAGEHVPVTVLQIDQCQVVAHRTTEKDGYVALQVGVGKAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS+  RG F+   V PKKKL EFRV +D  L+PVG+  +  +F  GQ VDVTG + GKGF
Sbjct: 61  VSQAERGRFAVAKVEPKKKLAEFRVSED-ALIPVGAEITADHFIPGQFVDVTGTSTGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G  RVT +NL+VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLKVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
             D +RGLILV+G VPG     WI VRDS K  +  
Sbjct: 180 RTDPERGLILVEGAVPGVA-GGWIQVRDSVKRKLPA 214


>gi|300702780|ref|YP_003744381.1| 50S ribosomal protein L3 [Ralstonia solanacearum CFBP2957]
 gi|299070442|emb|CBJ41737.1| 50S ribosomal subunit protein L3 [Ralstonia solanacearum CFBP2957]
          Length = 220

 Score =  270 bits (691), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 93/213 (43%), Positives = 127/213 (59%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V+  +G  IPVTVL +   +V   +T + +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + + EFR+       L +G       F  GQ +DV G TIGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEIIAEFRIDAAKAAELKLGDTIDVDLFAAGQKIDVQGTTIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RA+HG S SH   GS G  QDPGRVF  K+M G MG    TV+NL +
Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LVKG VPGA K+ +++V  + K+
Sbjct: 181 VRVDAERKLLLVKGAVPGA-KSGFVVVSPAVKA 212


>gi|90020607|ref|YP_526434.1| 50S ribosomal protein L3 [Saccharophagus degradans 2-40]
 gi|109893552|sp|Q21M57|RL3_SACD2 RecName: Full=50S ribosomal protein L3
 gi|89950207|gb|ABD80222.1| LSU ribosomal protein L3P [Saccharophagus degradans 2-40]
          Length = 214

 Score =  270 bits (691), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 97/215 (45%), Positives = 133/215 (61%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++  +G  +PVTV+ +D  ++   ++++ +GY AVQV  G  +   
Sbjct: 1   MTIGIVGRKSGMTRIFTDDGLSVPVTVVEVDPNRITQVKSVETDGYAAVQVTVGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKP  G F+   V   + + E R +   +   VG + +   F  GQ VDVTG + GKGF
Sbjct: 61  VSKPEAGHFAKAEVEAGRTVLELRNESG-EQFEVGGLLTVEAFEAGQKVDVTGASKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR+NF    ATHG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLEVV
Sbjct: 120 AGVIKRYNFRMQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAARVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            VD +R L+L+KG VPGA     +++R + KS  N
Sbjct: 180 RVDVERNLLLIKGAVPGAPGGD-VIIRPAVKSRNN 213


>gi|83748149|ref|ZP_00945176.1| LSU ribosomal protein L3P [Ralstonia solanacearum UW551]
 gi|83725117|gb|EAP72268.1| LSU ribosomal protein L3P [Ralstonia solanacearum UW551]
          Length = 220

 Score =  270 bits (691), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 93/213 (43%), Positives = 128/213 (60%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V+  +G  IPVTVL +   +V   +T + +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + + EFR+       L +G       F+ GQ +DV G TIGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEIIAEFRIDAAKAAELKLGDTIDVDLFSAGQKIDVQGTTIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RA+HG S SH   GS G  QDPGRVF  K+M G MG    TV+NL +
Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LVKG VPGA K+ +++V  + K+
Sbjct: 181 VRVDAERKLLLVKGAVPGA-KSGFVVVSPAVKA 212


>gi|154245623|ref|YP_001416581.1| 50S ribosomal protein L3 [Xanthobacter autotrophicus Py2]
 gi|226730590|sp|A7IFY1|RL3_XANP2 RecName: Full=50S ribosomal protein L3
 gi|154159708|gb|ABS66924.1| ribosomal protein L3 [Xanthobacter autotrophicus Py2]
          Length = 241

 Score =  270 bits (690), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 132/219 (60%), Positives = 161/219 (73%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT ++   G  +PVTVL +++CQVV HRTLDKNGY+AVQ+GAG  K KN
Sbjct: 1   MRSGVIAQKVGMTRIFTDAGEHVPVTVLKVESCQVVAHRTLDKNGYVAVQLGAGRRKPKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++  RG F+   V PK KL EFRV  ++ L+PVG+  +  +F VGQ VDVTG TIGKGF
Sbjct: 61  VTRAERGHFAVAQVEPKHKLAEFRV-PEEALIPVGAEITADHFVVGQYVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G MG   VT +NL+VV
Sbjct: 120 AGGMKRHNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGDVTVTTQNLKVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
             D +RGLI V+G VPG     WI VRD+ K  +  +  
Sbjct: 180 MTDVERGLIAVEGAVPG-HAGGWITVRDAVKKKLPAEAP 217


>gi|298291438|ref|YP_003693377.1| 50S ribosomal protein L3 [Starkeya novella DSM 506]
 gi|296927949|gb|ADH88758.1| 50S ribosomal protein L3 [Starkeya novella DSM 506]
          Length = 251

 Score =  270 bits (690), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 129/219 (58%), Positives = 165/219 (75%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT ++N  G  +PVTVL +DNCQVV HRT++KNGY AVQ+G G+AK +N
Sbjct: 1   MRSGVIAQKVGMTRIFNDAGEHVPVTVLKVDNCQVVAHRTVEKNGYTAVQLGVGQAKPQN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            ++ +RG F+   V PK+K+ EFRV++  DL+PVG+  +  +F VGQ VDVTG +IGKGF
Sbjct: 61  TTRALRGHFAVAKVEPKRKMAEFRVEE-SDLIPVGAELTVDHFVVGQFVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G   VT +NL+VV
Sbjct: 120 AGGMKRHNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGAETVTTQNLKVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
             D +RGLI V+G VPG  K  WI+V D+ K  +  +  
Sbjct: 180 LTDVERGLIAVEGAVPG-NKGGWIIVADAVKKKLPAEAP 217


>gi|225627703|ref|ZP_03785740.1| 50S ribosomal protein L3 [Brucella ceti str. Cudo]
 gi|225617708|gb|EEH14753.1| 50S ribosomal protein L3 [Brucella ceti str. Cudo]
          Length = 245

 Score =  270 bits (690), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 138/219 (63%), Positives = 164/219 (74%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT VYN  G  +PVTVL ++NC VV  RT++KNGY AVQ+G G AKVKN
Sbjct: 9   MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 68

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+   V PK KL EFRV  D +LL VG   +  +F  GQ VDVTG +IGKGF
Sbjct: 69  TSKAMRGHFAKAEVEPKAKLAEFRVSPD-NLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 127

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 128 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 187

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           S D  RGLILV+G VPG+ K +WILVRD+ K+++     
Sbjct: 188 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASLPENAP 225


>gi|326390661|ref|ZP_08212216.1| 50S ribosomal protein L3 [Thermoanaerobacter ethanolicus JW 200]
 gi|325993339|gb|EGD51776.1| 50S ribosomal protein L3 [Thermoanaerobacter ethanolicus JW 200]
          Length = 210

 Score =  270 bits (690), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 97/212 (45%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +K GMT ++N +G  IPVTV+    C VV  +T++ +GY A+QVG G+ K K 
Sbjct: 1   MKKGILGKKHGMTQIFNEKGEVIPVTVIEAGPCVVVQKKTVETDGYNAIQVGFGDVKEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+ G F  V V  K+ L EF++  D     VGS      F  G  VDVTG++ GKGF
Sbjct: 61  LTKPLIGHFKKVGVPFKRYLREFKLD-DISGYEVGSEIKVDIFKPGDRVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR+       +HG S  HR  GS G   DPGR FK K M G MG  RVT++NLEVV
Sbjct: 120 AGVVKRYGANRGPMSHG-SKYHRRVGSMGATTDPGRTFKGKIMPGHMGHERVTIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  L+LVKG VPG  K S ++++DS KS
Sbjct: 179 KVDPELNLLLVKGSVPGP-KGSLLIIKDSVKS 209


>gi|317123097|ref|YP_004103100.1| 50S ribosomal protein L3P [Thermaerobacter marianensis DSM 12885]
 gi|315593077|gb|ADU52373.1| LSU ribosomal protein L3P [Thermaerobacter marianensis DSM 12885]
          Length = 217

 Score =  270 bits (690), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 102/210 (48%), Positives = 133/210 (63%), Gaps = 3/210 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RKLGMT +++ EGR +PVTV+    C VV  RT +++GY AVQ+G GE K   
Sbjct: 1   MGVGLLGRKLGMTQIFDDEGRAVPVTVIQAGPCVVVQTRTEERDGYRAVQLGFGEVKPSK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP-VGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KPM G F    V+P K L EFR++ DD+ LP VG   +   F  G+ VDVTG + GKG
Sbjct: 61  VNKPMAGHFRKAGVAPVKVLREFRLEGDDEPLPEVGQQLTVELFKAGEYVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G + RH FG    +HG S  HR  GS G    P RVFK ++MAGR G  RVTV+ L+V
Sbjct: 121 FLGPIARHGFGRGPMSHG-SKYHRGPGSLGPSTYPARVFKGRRMAGRTGAERVTVRGLQV 179

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           V VD +R L+LVKG VPG  + S + +R +
Sbjct: 180 VRVDPERNLLLVKGAVPGP-RGSVVAIRKT 208


>gi|163851585|ref|YP_001639628.1| 50S ribosomal protein L3 [Methylobacterium extorquens PA1]
 gi|240138753|ref|YP_002963225.1| 50S ribosomal subunit protein L3 [Methylobacterium extorquens AM1]
 gi|254561353|ref|YP_003068448.1| 50S ribosomal subunit protein L3 [Methylobacterium extorquens DM4]
 gi|226730532|sp|A9W4Q1|RL3_METEP RecName: Full=50S ribosomal protein L3
 gi|163663190|gb|ABY30557.1| ribosomal protein L3 [Methylobacterium extorquens PA1]
 gi|240008722|gb|ACS39948.1| 50S ribosomal subunit protein L3 [Methylobacterium extorquens AM1]
 gi|254268631|emb|CAX24590.1| 50S ribosomal subunit protein L3 [Methylobacterium extorquens DM4]
          Length = 246

 Score =  270 bits (690), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 134/216 (62%), Positives = 160/216 (74%), Gaps = 2/216 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+ARK+GMT V+   G  +PVTVL +D CQVV HRT +K+GY+A+QVG G+AKVKN
Sbjct: 1   MRSGVIARKVGMTRVFTDAGEHVPVTVLQIDQCQVVAHRTTEKDGYVALQVGVGKAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS+  RG F+   V PKKKL EFRV +D  L+PVG+  +  +F  GQ VDVTG + GKGF
Sbjct: 61  VSQAERGRFAVAKVEPKKKLAEFRVSED-ALIPVGAEITADHFIPGQFVDVTGTSTGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G  RVT +NL+VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLKVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
             D +RGLILV+G VPG     WI VRDS K  +  
Sbjct: 180 RTDPERGLILVEGAVPGVA-GGWIQVRDSVKRKLPA 214


>gi|163868650|ref|YP_001609859.1| 50S ribosomal protein L3 [Bartonella tribocorum CIP 105476]
 gi|189042832|sp|A9IW27|RL3_BART1 RecName: Full=50S ribosomal protein L3
 gi|161018306|emb|CAK01864.1| 50S ribosomal protein L3 [Bartonella tribocorum CIP 105476]
          Length = 245

 Score =  270 bits (690), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 133/219 (60%), Positives = 164/219 (74%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT +YN  G  +PVTVL L+NCQVV  RT++KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLENCQVVAQRTVEKNGYTAVQLGVGFAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ +RG F+  +V PK K+ EFRV  D +LL +G+  +  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSQALRGHFAKASVEPKAKIAEFRVSPD-NLLDIGTEITVEHFVPGQRVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HR+HGSTG  QDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNIEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           S D +RGLILV+G V G+ K SWILVRD+ K  +     
Sbjct: 180 STDIERGLILVRGAVSGS-KGSWILVRDAVKKPLPDNAP 217


>gi|167748430|ref|ZP_02420557.1| hypothetical protein ANACAC_03174 [Anaerostipes caccae DSM 14662]
 gi|317472037|ref|ZP_07931369.1| 50S ribosomal protein L3 [Anaerostipes sp. 3_2_56FAA]
 gi|167652422|gb|EDR96551.1| hypothetical protein ANACAC_03174 [Anaerostipes caccae DSM 14662]
 gi|316900441|gb|EFV22423.1| 50S ribosomal protein L3 [Anaerostipes sp. 3_2_56FAA]
          Length = 209

 Score =  270 bits (690), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 127/212 (59%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++  K+GMT ++N +G   PVTVL    C V   +T + +GY AVQVG  + K K+
Sbjct: 1   MKKAILTTKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTEENDGYEAVQVGFADKKEKS 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G F    V+PKK + EF+ +   +   VG       F  G  +D T  + GKG+
Sbjct: 61  VNKPEKGHFDKAGVAPKKFVREFKFENASE-YTVGQEIKADIFEAGDKIDATATSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH       THG S  HR  GS G   DP +VFK KKM G+MG  RVT++NLEVV
Sbjct: 120 AGGIKRHGLSTGPKTHG-SKYHRHAGSNGMASDPSKVFKGKKMPGQMGSERVTIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  +ILVKG VPG KK S +++++S K+
Sbjct: 179 KVDAENNIILVKGAVPGPKK-SLVMLKESVKA 209


>gi|237815652|ref|ZP_04594649.1| 50S ribosomal protein L3 [Brucella abortus str. 2308 A]
 gi|17982696|gb|AAL51938.1| lsu ribosomal protein l3p [Brucella melitensis bv. 1 str. 16M]
 gi|237788950|gb|EEP63161.1| 50S ribosomal protein L3 [Brucella abortus str. 2308 A]
          Length = 245

 Score =  270 bits (690), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 138/219 (63%), Positives = 164/219 (74%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT VYN  G  +PVTVL ++NC VV  RT++KNGY AVQ+G G AKVKN
Sbjct: 9   MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 68

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+   V PK KL EFRV  D +LL VG   +  +F  GQ VDVTG +IGKGF
Sbjct: 69  TSKAMRGHFAKAEVEPKAKLAEFRVSPD-NLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 127

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 128 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 187

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           S D  RGLILV+G VPG+ K +WILVRD+ K+++     
Sbjct: 188 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASLPENAP 225


>gi|154253177|ref|YP_001414001.1| 50S ribosomal protein L3 [Parvibaculum lavamentivorans DS-1]
 gi|171769627|sp|A7HWR1|RL3_PARL1 RecName: Full=50S ribosomal protein L3
 gi|154157127|gb|ABS64344.1| ribosomal protein L3 [Parvibaculum lavamentivorans DS-1]
          Length = 251

 Score =  270 bits (690), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 132/215 (61%), Positives = 161/215 (74%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+ +K+GMT ++  +GR +PVTVL LDNCQVV  RT +KNGY AVQ+G G AK KN
Sbjct: 1   MRSGVIVKKVGMTRLFMEDGRHVPVTVLKLDNCQVVSQRTDEKNGYTAVQLGTGRAKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+   RG F+  +V PK +L EFRV  D +LL VG   +  +F  GQ VDV+G +IGKGF
Sbjct: 61  VANAQRGQFARASVEPKLELVEFRVSPD-NLLDVGVEITADHFIAGQYVDVSGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGGLRATHGVS+SHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 120 AGVMKRHNFGGLRATHGVSVSHRSHGSTGQNQDPGKVFKGKKMAGHMGATRVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D  +GLI+VKG VPG+ K  W+LVRD+ K+ + 
Sbjct: 180 RTDADKGLIMVKGAVPGS-KGGWVLVRDAVKTKLP 213


>gi|302382618|ref|YP_003818441.1| 50S ribosomal protein L3 [Brevundimonas subvibrioides ATCC 15264]
 gi|302193246|gb|ADL00818.1| 50S ribosomal protein L3 [Brevundimonas subvibrioides ATCC 15264]
          Length = 250

 Score =  270 bits (690), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 123/212 (58%), Positives = 157/212 (74%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+KLGMT V+  +G+ +PVTVL LD+CQVV  RT +++GY+A+Q+GAG  K KN
Sbjct: 1   MRTGVIAKKLGMTRVFADDGQHVPVTVLQLDDCQVVGQRTQERDGYVALQLGAGTKKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +K  R  F++  V PK  + EFRV  DD ++ VG+  S  +F VGQ VD+ G TIGKGF
Sbjct: 61  TNKAQRTTFATAEVEPKHVVMEFRVT-DDAMIDVGATLSADHFVVGQKVDIQGETIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FK KKMAG++G   +T +NL +V
Sbjct: 120 QGGMKRWNFGGLRATHGVSVSHRSLGSTGQRQDPGKTFKGKKMAGQLGNETITTQNLTIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +RGLILVKG VPG  + SW+ VRD+ K 
Sbjct: 180 RVDAERGLILVKGAVPG-HEGSWVKVRDAHKK 210


>gi|188581375|ref|YP_001924820.1| 50S ribosomal protein L3 [Methylobacterium populi BJ001]
 gi|226730534|sp|B1ZLK4|RL3_METPB RecName: Full=50S ribosomal protein L3
 gi|179344873|gb|ACB80285.1| ribosomal protein L3 [Methylobacterium populi BJ001]
          Length = 246

 Score =  269 bits (689), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 135/216 (62%), Positives = 160/216 (74%), Gaps = 2/216 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+ARK+GMT V+   G  +PVTVL +D CQVV HRT +K+GY+A+QVG G+AKVKN
Sbjct: 1   MRSGVIARKVGMTRVFTDAGEHVPVTVLQIDQCQVVAHRTTEKDGYVALQVGVGKAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS+  RG F+   V PKKKL EFRV +D  L+PVG+  +  +F  GQ VDVTG T GKGF
Sbjct: 61  VSQAERGRFAVAKVEPKKKLAEFRVSED-ALIPVGAEITADHFIPGQFVDVTGTTTGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G  RVT +NL+VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLKVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
             D +RGLILV+G VPG     WI VRDS K  +  
Sbjct: 180 RTDPERGLILVEGAVPGVA-GGWIQVRDSVKRKLPA 214


>gi|307267014|ref|ZP_07548530.1| 50S ribosomal protein L3 [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306917999|gb|EFN48257.1| 50S ribosomal protein L3 [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 210

 Score =  269 bits (689), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 97/212 (45%), Positives = 132/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +K GMT ++N +G  IPVTV+    C VV  +T++ +GY A+QVG G+ K K 
Sbjct: 1   MKKGILGKKHGMTQIFNEKGEVIPVTVIEAGPCVVVQKKTVETDGYNAIQVGFGDVKEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+ G F  V V  K+ L EF++  D +   VGS      F  G  VDVTG++ GKGF
Sbjct: 61  LTKPLIGHFKKVGVPFKRYLREFKLD-DINGYEVGSEIKVDIFKPGDRVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR+       +HG S  HR  GS G   DPGR FK K M G MG  RVT++NLEVV
Sbjct: 120 AGVVKRYGANRGPMSHG-SKYHRRVGSMGATTDPGRTFKGKIMPGHMGHERVTIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  L+LVKG VPG  K S ++++DS KS
Sbjct: 179 KVDPELNLLLVKGSVPGP-KGSLLIIKDSVKS 209


>gi|254785079|ref|YP_003072507.1| 50S ribosomal protein L3 [Teredinibacter turnerae T7901]
 gi|259709742|sp|C5BQ61|RL3_TERTT RecName: Full=50S ribosomal protein L3
 gi|237683501|gb|ACR10765.1| ribosomal protein L3 [Teredinibacter turnerae T7901]
          Length = 214

 Score =  269 bits (689), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 90/211 (42%), Positives = 126/211 (59%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++  +G  +PVTV+ +D  ++   ++++ +GY AVQV  G  +   
Sbjct: 1   MTIGIVGRKSGMTRIFTDDGLSVPVTVIEVDPNRITQVKSVETDGYAAVQVTVGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+       + ++E R  +  +   VG   +   F  GQ VDVTG + GKGF
Sbjct: 61  VTKAEAGHFAKAQTEAGRGVWELR-NEAGEAFEVGGQLTVEAFEAGQKVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF    ATHG S+SHR+ GS G  Q PGRV K KKM+G MG  RVT +NLEVV
Sbjct: 120 AGTVKRWNFRTQDATHGNSLSHRAPGSIGQCQTPGRVMKGKKMSGHMGAERVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L+L+KG VPGA     + +R + K
Sbjct: 180 RVDVERNLLLIKGAVPGAPGGD-VFIRPAVK 209


>gi|237806875|ref|YP_002891315.1| 50S ribosomal protein L3 [Tolumonas auensis DSM 9187]
 gi|259709745|sp|C4L7T0|RL3_TOLAT RecName: Full=50S ribosomal protein L3
 gi|237499136|gb|ACQ91729.1| ribosomal protein L3 [Tolumonas auensis DSM 9187]
          Length = 212

 Score =  269 bits (689), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 95/213 (44%), Positives = 131/213 (61%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RKLGMT V+  +G  IPVTV+ ++  +V   +TL+ +GY AVQV  G  K   
Sbjct: 1   MTLGLVGRKLGMTRVFTEDGVSIPVTVIEVEANRVTQLKTLETDGYTAVQVTTGVKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++K   G F+   V   + L+EFR+   +   L VGS      F   +  DVTG++ GKG
Sbjct: 61  LTKAEAGHFAKAEVEAGRGLWEFRLNDGEGADLTVGSELKVDIFADVKKADVTGISKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KR NF     THG S SHR  GS G  Q PG+VFK KKMAG +G  RVTV++L++
Sbjct: 121 FAGVVKRWNFRTQDMTHGNSRSHRVPGSIGQNQSPGKVFKGKKMAGHLGCERVTVQSLDI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+L+KG VPGA  N  ++V+ + K+
Sbjct: 181 VRVDVERNLLLIKGAVPGA-TNGDVIVKPAVKA 212


>gi|90417763|ref|ZP_01225675.1| ribosomal protein L3 [Aurantimonas manganoxydans SI85-9A1]
 gi|90337435|gb|EAS51086.1| ribosomal protein L3 [Aurantimonas manganoxydans SI85-9A1]
          Length = 241

 Score =  269 bits (689), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 140/219 (63%), Positives = 173/219 (78%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  +PVTVL ++N QVV  RT +KNGY AVQVGAG AKVKN
Sbjct: 1   MRSGVIAQKVGMTRVYNDVGEHVPVTVLKVENLQVVAQRTKEKNGYTAVQVGAGLAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SKPMRG F+  +V PK+KL EFRV  DD+++ VG+  +  +F  GQ+VDVTG +IGKGF
Sbjct: 61  TSKPMRGVFAQASVEPKRKLVEFRVS-DDNMIDVGAEITAEHFVPGQMVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG  RVT +NL+VV
Sbjct: 120 AGAMKRHNFGGLRATHGVSVSHRSHGSTGQRQDPGKVFKNKKMAGHMGDVRVTTQNLQVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            +D ++GLILV+G VPG+ K  WI +RD+ K+++     
Sbjct: 180 RIDPEKGLILVRGAVPGS-KGGWIEIRDAVKASLPDNAP 217


>gi|223041817|ref|ZP_03612007.1| 50S ribosomal protein L3 [Actinobacillus minor 202]
 gi|240947884|ref|ZP_04752324.1| 50S ribosomal protein L3 [Actinobacillus minor NM305]
 gi|223017386|gb|EEF15807.1| 50S ribosomal protein L3 [Actinobacillus minor 202]
 gi|240297846|gb|EER48282.1| 50S ribosomal protein L3 [Actinobacillus minor NM305]
          Length = 210

 Score =  269 bits (689), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 98/210 (46%), Positives = 132/210 (62%), Gaps = 1/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   V+
Sbjct: 2   IGLIGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDGYSAIQVTTGTKKASRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V   + L+EFR + +     +G   +   FT  + VDVTG + GKGF G
Sbjct: 62  KPEAGHFVKAGVEAGRGLWEFRTEGETQEFTLGQEINVDIFTDVKKVDVTGTSKGKGFQG 121

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV V
Sbjct: 122 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 181

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA  NS ++V+ + K+
Sbjct: 182 DAERKLLLVKGAVPGA-TNSDVIVKPAVKA 210


>gi|240850835|ref|YP_002972235.1| 50S ribosomal protein L3 [Bartonella grahamii as4aup]
 gi|240267958|gb|ACS51546.1| 50S ribosomal protein L3 [Bartonella grahamii as4aup]
          Length = 245

 Score =  269 bits (689), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 133/219 (60%), Positives = 164/219 (74%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT +YN  G  +PVTVL L+NCQVV  RT++KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLENCQVVAQRTVEKNGYTAVQLGVGFAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ +RG F+  +V PK K+ EFRV  D +LL VG+  +  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSQALRGHFAKASVEPKAKIAEFRVSPD-NLLDVGTEITVEHFVPGQRVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HR+HGSTG  QDPG+VFK KKMAG MG  RVT +N+EV+
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNIEVI 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           S D +RGLILV+G V G+ K SWILVRD+ K  +     
Sbjct: 180 STDSERGLILVRGAVSGS-KGSWILVRDAVKKRLPDNAP 217


>gi|148560391|ref|YP_001259153.1| 50S ribosomal protein L3 [Brucella ovis ATCC 25840]
 gi|161619189|ref|YP_001593076.1| 50S ribosomal protein L3 [Brucella canis ATCC 23365]
 gi|163843499|ref|YP_001627903.1| 50S ribosomal protein L3 [Brucella suis ATCC 23445]
 gi|254701974|ref|ZP_05163802.1| 50S ribosomal protein L3 [Brucella suis bv. 5 str. 513]
 gi|254704518|ref|ZP_05166346.1| 50S ribosomal protein L3 [Brucella suis bv. 3 str. 686]
 gi|254706586|ref|ZP_05168414.1| 50S ribosomal protein L3 [Brucella pinnipedialis M163/99/10]
 gi|254710304|ref|ZP_05172115.1| 50S ribosomal protein L3 [Brucella pinnipedialis B2/94]
 gi|254719291|ref|ZP_05181102.1| 50S ribosomal protein L3 [Brucella sp. 83/13]
 gi|256031798|ref|ZP_05445412.1| 50S ribosomal protein L3 [Brucella pinnipedialis M292/94/1]
 gi|256061313|ref|ZP_05451463.1| 50S ribosomal protein L3 [Brucella neotomae 5K33]
 gi|256369657|ref|YP_003107167.1| 50S ribosomal protein L3 [Brucella microti CCM 4915]
 gi|260168932|ref|ZP_05755743.1| 50S ribosomal protein L3 [Brucella sp. F5/99]
 gi|260566238|ref|ZP_05836708.1| ribosomal protein L3 [Brucella suis bv. 4 str. 40]
 gi|261314046|ref|ZP_05953243.1| 50S ribosomal protein L3 [Brucella pinnipedialis M163/99/10]
 gi|261317867|ref|ZP_05957064.1| 50S ribosomal protein L3 [Brucella pinnipedialis B2/94]
 gi|261325320|ref|ZP_05964517.1| 50S ribosomal protein L3 [Brucella neotomae 5K33]
 gi|261752542|ref|ZP_05996251.1| 50S ribosomal protein L3 [Brucella suis bv. 5 str. 513]
 gi|261755201|ref|ZP_05998910.1| 50S ribosomal protein L3 [Brucella suis bv. 3 str. 686]
 gi|261758425|ref|ZP_06002134.1| ribosomal protein L3 [Brucella sp. F5/99]
 gi|265984291|ref|ZP_06097026.1| 50S ribosomal protein L3 [Brucella sp. 83/13]
 gi|265988896|ref|ZP_06101453.1| 50S ribosomal protein L3 [Brucella pinnipedialis M292/94/1]
 gi|294852570|ref|ZP_06793243.1| 50S ribosomal protein L3 [Brucella sp. NVSL 07-0026]
 gi|306838043|ref|ZP_07470901.1| 50S ribosomal protein L3 [Brucella sp. NF 2653]
 gi|306840301|ref|ZP_07473073.1| 50S ribosomal protein L3 [Brucella sp. BO2]
 gi|306844137|ref|ZP_07476731.1| 50S ribosomal protein L3 [Brucella sp. BO1]
 gi|166233122|sp|A5VR06|RL3_BRUO2 RecName: Full=50S ribosomal protein L3
 gi|189042833|sp|A9M5Q0|RL3_BRUC2 RecName: Full=50S ribosomal protein L3
 gi|189042834|sp|B0CH32|RL3_BRUSI RecName: Full=50S ribosomal protein L3
 gi|148371648|gb|ABQ61627.1| ribosomal protein L3 [Brucella ovis ATCC 25840]
 gi|161336000|gb|ABX62305.1| 50S ribosomal protein L3 [Brucella canis ATCC 23365]
 gi|163674222|gb|ABY38333.1| 50S ribosomal protein L3 [Brucella suis ATCC 23445]
 gi|255999819|gb|ACU48218.1| 50S ribosomal protein L3 [Brucella microti CCM 4915]
 gi|260155756|gb|EEW90836.1| ribosomal protein L3 [Brucella suis bv. 4 str. 40]
 gi|261297090|gb|EEY00587.1| 50S ribosomal protein L3 [Brucella pinnipedialis B2/94]
 gi|261301300|gb|EEY04797.1| 50S ribosomal protein L3 [Brucella neotomae 5K33]
 gi|261303072|gb|EEY06569.1| 50S ribosomal protein L3 [Brucella pinnipedialis M163/99/10]
 gi|261738409|gb|EEY26405.1| ribosomal protein L3 [Brucella sp. F5/99]
 gi|261742295|gb|EEY30221.1| 50S ribosomal protein L3 [Brucella suis bv. 5 str. 513]
 gi|261744954|gb|EEY32880.1| 50S ribosomal protein L3 [Brucella suis bv. 3 str. 686]
 gi|264661093|gb|EEZ31354.1| 50S ribosomal protein L3 [Brucella pinnipedialis M292/94/1]
 gi|264662883|gb|EEZ33144.1| 50S ribosomal protein L3 [Brucella sp. 83/13]
 gi|294821159|gb|EFG38158.1| 50S ribosomal protein L3 [Brucella sp. NVSL 07-0026]
 gi|306275580|gb|EFM57312.1| 50S ribosomal protein L3 [Brucella sp. BO1]
 gi|306289700|gb|EFM60889.1| 50S ribosomal protein L3 [Brucella sp. BO2]
 gi|306406967|gb|EFM63188.1| 50S ribosomal protein L3 [Brucella sp. NF 2653]
          Length = 237

 Score =  269 bits (689), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 138/219 (63%), Positives = 164/219 (74%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT VYN  G  +PVTVL ++NC VV  RT++KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+   V PK KL EFRV  D +LL VG   +  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSKAMRGHFAKAEVEPKAKLAEFRVSPD-NLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           S D  RGLILV+G VPG+ K +WILVRD+ K+++     
Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASLPENAP 217


>gi|56461024|ref|YP_156305.1| ribosomal protein L3 [Idiomarina loihiensis L2TR]
 gi|81821713|sp|Q5QXZ0|RL3_IDILO RecName: Full=50S ribosomal protein L3
 gi|56180034|gb|AAV82756.1| Ribosomal protein L3 [Idiomarina loihiensis L2TR]
          Length = 212

 Score =  269 bits (689), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 95/213 (44%), Positives = 134/213 (62%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V+  +G  +PVTV+ +   +V   ++ D +GY A+QV  GE K   
Sbjct: 1   MAIGLVGRKVGMTRVFQEDGASVPVTVIEVLANRVTQVKSDDTDGYRALQVTTGEKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G F+       + L+EFR+Q  +     VGS  +   F     VDVTG + GKG
Sbjct: 61  VTKPLAGHFAKAGTEAGRGLWEFRLQNGEGEDYAVGSELTVDIFAEVNKVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG+MG  +VT ++LE+
Sbjct: 121 FAGTVKRWNFSMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNEQVTTQSLEL 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+L+KG VPGA   S ++V+ + K+
Sbjct: 181 VRVDAERSLLLIKGAVPGA-TGSDVIVKPAVKA 212


>gi|310817008|ref|YP_003964972.1| 50S ribosomal protein L3 [Ketogulonicigenium vulgare Y25]
 gi|308755743|gb|ADO43672.1| 50S ribosomal protein L3 [Ketogulonicigenium vulgare Y25]
          Length = 237

 Score =  269 bits (688), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 121/212 (57%), Positives = 162/212 (76%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSG +A+K+GMT ++  +GR++PVTVL  +N QVV  RT++K+GY AVQ+GAG AK KN
Sbjct: 4   LRSGTIAKKIGMTRLFLEDGRQVPVTVLQFENLQVVAQRTVEKDGYTAVQLGAGTAKAKN 63

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++PMRG F++  V PK+KL EFRV  + +L+PVG+     ++  GQ VD++G +IGKGF
Sbjct: 64  VTQPMRGHFAAAKVEPKRKLAEFRVTPE-NLIPVGAEIIADHYVAGQFVDISGTSIGKGF 122

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGGLRA+HGVS+SHRSHGS G  QDPGR+FK KKMAG MG  RVT +NL+V+
Sbjct: 123 AGVMKRHNFGGLRASHGVSVSHRSHGSVGQCQDPGRIFKGKKMAGHMGSARVTTQNLQVI 182

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
             D  RGL++VKG VPG  K  W+ ++D+ K 
Sbjct: 183 RTDSTRGLVMVKGAVPG-NKGGWVTIKDAVKK 213


>gi|295688906|ref|YP_003592599.1| 50S ribosomal protein L3 [Caulobacter segnis ATCC 21756]
 gi|295430809|gb|ADG09981.1| 50S ribosomal protein L3 [Caulobacter segnis ATCC 21756]
          Length = 254

 Score =  269 bits (688), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 121/218 (55%), Positives = 157/218 (72%), Gaps = 2/218 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GV+A+KLGMT  ++  G+ +PVTVL LD CQV   RT++K+GY A+Q+GAG  K KN 
Sbjct: 7   RTGVLAKKLGMTRFFDEAGQHVPVTVLSLDGCQVTGVRTVEKDGYTALQLGAGAKKAKNT 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SK +RG F+   V PK+ + EFRV+++  L+ VG+  +  +F  GQ VD+ G+T+GKGF+
Sbjct: 67  SKALRGHFAKAAVEPKRVVAEFRVEEN-ALIEVGAELTADHFVAGQKVDIQGVTVGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F  KKMAG +G   VT  N+ V  
Sbjct: 126 GAMKRWNFGGLRATHGVSVSHRSHGSTGNRQDPGRTFPGKKMAGHLGQETVTTLNVTVWK 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           VD +RGLILVKG VPG  + S++ VRD+ K A+     
Sbjct: 186 VDVERGLILVKGAVPG-HEGSYVKVRDAVKKALPADAP 222


>gi|183600753|ref|ZP_02962246.1| hypothetical protein PROSTU_04347 [Providencia stuartii ATCC 25827]
 gi|188019731|gb|EDU57771.1| hypothetical protein PROSTU_04347 [Providencia stuartii ATCC 25827]
          Length = 209

 Score =  269 bits (688), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 96/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++N +V   +T + +GY A+QV  G  K   VS
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKTAETDGYNAIQVTTGSKKANRVS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L EFR ++  +   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRILREFRTEEGAEF-NVGQSISVEIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|225027478|ref|ZP_03716670.1| hypothetical protein EUBHAL_01734 [Eubacterium hallii DSM 3353]
 gi|224955213|gb|EEG36422.1| hypothetical protein EUBHAL_01734 [Eubacterium hallii DSM 3353]
          Length = 209

 Score =  269 bits (688), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 88/212 (41%), Positives = 128/212 (60%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++  +G  IPVTVL    C+V   +T++ +GY AVQVG  + + K 
Sbjct: 1   MKKAILATKIGMTQIFAEDGELIPVTVLQAGPCEVTQVKTVENDGYSAVQVGFQDMREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KPM+G F    VS K+ + EF++  D +   +G   +   F  G  VD T ++ GKGF
Sbjct: 61  STKPMKGHFEKAGVSVKRFVREFKLD-DAENYELGQKITVDVFEAGDKVDATAISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH       THG S  HR  GS G   DP +V K KKM G+MG  ++T++NLEVV
Sbjct: 120 QGAIKRHGQHTGPKTHG-SKYHRHAGSNGMASDPSKVMKGKKMPGQMGHVQITIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +D +  +ILVKG VPG KK S + ++ + K+
Sbjct: 179 KIDAENNVILVKGSVPGPKK-SLVTLKAAVKA 209


>gi|62290144|ref|YP_221937.1| 50S ribosomal protein L3 [Brucella abortus bv. 1 str. 9-941]
 gi|82700067|ref|YP_414641.1| 50S ribosomal protein L3 [Brucella melitensis biovar Abortus 2308]
 gi|161511150|ref|NP_539674.2| 50S ribosomal protein L3 [Brucella melitensis bv. 1 str. 16M]
 gi|189024382|ref|YP_001935150.1| Ribosomal protein L3 [Brucella abortus S19]
 gi|225852730|ref|YP_002732963.1| 50S ribosomal protein L3 [Brucella melitensis ATCC 23457]
 gi|254689453|ref|ZP_05152707.1| 50S ribosomal protein L3 [Brucella abortus bv. 6 str. 870]
 gi|254693938|ref|ZP_05155766.1| 50S ribosomal protein L3 [Brucella abortus bv. 3 str. Tulya]
 gi|254697588|ref|ZP_05159416.1| 50S ribosomal protein L3 [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730482|ref|ZP_05189060.1| 50S ribosomal protein L3 [Brucella abortus bv. 4 str. 292]
 gi|256044883|ref|ZP_05447787.1| 50S ribosomal protein L3 [Brucella melitensis bv. 1 str. Rev.1]
 gi|256113787|ref|ZP_05454591.1| 50S ribosomal protein L3 [Brucella melitensis bv. 3 str. Ether]
 gi|256257699|ref|ZP_05463235.1| 50S ribosomal protein L3 [Brucella abortus bv. 9 str. C68]
 gi|256263780|ref|ZP_05466312.1| ribosomal protein L3 [Brucella melitensis bv. 2 str. 63/9]
 gi|260546692|ref|ZP_05822431.1| ribosomal protein L3 [Brucella abortus NCTC 8038]
 gi|260565515|ref|ZP_05835999.1| ribosomal protein L3 [Brucella melitensis bv. 1 str. 16M]
 gi|260754976|ref|ZP_05867324.1| 50S ribosomal protein L3 [Brucella abortus bv. 6 str. 870]
 gi|260758192|ref|ZP_05870540.1| 50S ribosomal protein L3 [Brucella abortus bv. 4 str. 292]
 gi|260762018|ref|ZP_05874361.1| 50S ribosomal protein L3 [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883985|ref|ZP_05895599.1| 50S ribosomal protein L3 [Brucella abortus bv. 9 str. C68]
 gi|261214230|ref|ZP_05928511.1| 50S ribosomal protein L3 [Brucella abortus bv. 3 str. Tulya]
 gi|265991310|ref|ZP_06103867.1| 50S ribosomal protein L3 [Brucella melitensis bv. 1 str. Rev.1]
 gi|265995147|ref|ZP_06107704.1| 50S ribosomal protein L3 [Brucella melitensis bv. 3 str. Ether]
 gi|297248539|ref|ZP_06932257.1| 50S ribosomal protein L3 [Brucella abortus bv. 5 str. B3196]
 gi|42559669|sp|Q8YHP0|RL3_BRUME RecName: Full=50S ribosomal protein L3
 gi|81309408|sp|Q57CQ8|RL3_BRUAB RecName: Full=50S ribosomal protein L3
 gi|109893414|sp|Q2YM03|RL3_BRUA2 RecName: Full=50S ribosomal protein L3
 gi|226725140|sp|B2S679|RL3_BRUA1 RecName: Full=50S ribosomal protein L3
 gi|254803659|sp|C0RJK1|RL3_BRUMB RecName: Full=50S ribosomal protein L3
 gi|62196276|gb|AAX74576.1| RplC, ribosomal protein L3 [Brucella abortus bv. 1 str. 9-941]
 gi|82616168|emb|CAJ11211.1| Ribosomal protein L3 [Brucella melitensis biovar Abortus 2308]
 gi|189019954|gb|ACD72676.1| Ribosomal protein L3 [Brucella abortus S19]
 gi|225641095|gb|ACO01009.1| 50S ribosomal protein L3 [Brucella melitensis ATCC 23457]
 gi|260095742|gb|EEW79619.1| ribosomal protein L3 [Brucella abortus NCTC 8038]
 gi|260151583|gb|EEW86677.1| ribosomal protein L3 [Brucella melitensis bv. 1 str. 16M]
 gi|260668510|gb|EEX55450.1| 50S ribosomal protein L3 [Brucella abortus bv. 4 str. 292]
 gi|260672450|gb|EEX59271.1| 50S ribosomal protein L3 [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675084|gb|EEX61905.1| 50S ribosomal protein L3 [Brucella abortus bv. 6 str. 870]
 gi|260873513|gb|EEX80582.1| 50S ribosomal protein L3 [Brucella abortus bv. 9 str. C68]
 gi|260915837|gb|EEX82698.1| 50S ribosomal protein L3 [Brucella abortus bv. 3 str. Tulya]
 gi|262766260|gb|EEZ12049.1| 50S ribosomal protein L3 [Brucella melitensis bv. 3 str. Ether]
 gi|263002094|gb|EEZ14669.1| 50S ribosomal protein L3 [Brucella melitensis bv. 1 str. Rev.1]
 gi|263093908|gb|EEZ17842.1| ribosomal protein L3 [Brucella melitensis bv. 2 str. 63/9]
 gi|297175708|gb|EFH35055.1| 50S ribosomal protein L3 [Brucella abortus bv. 5 str. B3196]
 gi|326409255|gb|ADZ66320.1| Ribosomal protein L3 [Brucella melitensis M28]
 gi|326538963|gb|ADZ87178.1| 50S ribosomal protein L3 [Brucella melitensis M5-90]
          Length = 237

 Score =  269 bits (688), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 138/219 (63%), Positives = 164/219 (74%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT VYN  G  +PVTVL ++NC VV  RT++KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+   V PK KL EFRV  D +LL VG   +  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSKAMRGHFAKAEVEPKAKLAEFRVSPD-NLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           S D  RGLILV+G VPG+ K +WILVRD+ K+++     
Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASLPENAP 217


>gi|268593541|ref|ZP_06127762.1| 50S ribosomal protein L3 [Providencia rettgeri DSM 1131]
 gi|291310819|gb|EFE51272.1| 50S ribosomal protein L3 [Providencia rettgeri DSM 1131]
          Length = 209

 Score =  269 bits (688), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 96/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++N +V   +T + +GY A+QV  G  K   V+
Sbjct: 2   KGLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKTAETDGYNAIQVTTGSKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L EFR+ +D     VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRILREFRI-EDSAEYTVGQSISVEIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSNLIVKPAVKA 209


>gi|126732274|ref|ZP_01748074.1| ribosomal protein L3 [Sagittula stellata E-37]
 gi|126707143|gb|EBA06209.1| ribosomal protein L3 [Sagittula stellata E-37]
          Length = 279

 Score =  269 bits (688), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 126/215 (58%), Positives = 158/215 (73%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+  +G++IPVTVL LDN QVV  RT + NGY AV +G G AK K 
Sbjct: 1   MRSGVIAKKIGMTRVFMEDGKQIPVTVLQLDNLQVVAQRTDETNGYSAVALGCGTAKAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ MR  FS+  V PK+K+ EFRV  + +L+ VG      ++  GQ VDV+G+TIGKGF
Sbjct: 61  TSQAMRKVFSNAGVEPKRKIVEFRVAPE-NLIEVGEEIIADHYFEGQFVDVSGITIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGGLRATHGVSISHRSHGSTG  Q+PG+VFK KKMAG MG  RVT +NL+VV
Sbjct: 120 AGGMKRHNFGGLRATHGVSISHRSHGSTGQCQNPGKVFKGKKMAGHMGSVRVTTQNLQVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D  RG+I++KG VPG  K SW+ ++D+ K  V 
Sbjct: 180 RTDSDRGVIMIKGAVPGP-KGSWVTIKDAVKKPVP 213


>gi|153952861|ref|YP_001393626.1| 50S ribosomal protein L3 [Clostridium kluyveri DSM 555]
 gi|219853526|ref|YP_002470648.1| hypothetical protein CKR_0183 [Clostridium kluyveri NBRC 12016]
 gi|189042838|sp|A5N4P7|RL3_CLOK5 RecName: Full=50S ribosomal protein L3
 gi|254803666|sp|B9DYA9|RL3_CLOK1 RecName: Full=50S ribosomal protein L3
 gi|146345742|gb|EDK32278.1| RplC [Clostridium kluyveri DSM 555]
 gi|219567250|dbj|BAH05234.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 209

 Score =  269 bits (688), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 89/212 (41%), Positives = 130/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +KLGMT ++N  GR IPVTV+    C VV  +T +K+GY ++Q+G G+ + K 
Sbjct: 1   MKKAILGKKLGMTQIFNENGRVIPVTVIEAGPCVVVQKKTEEKDGYKSIQIGFGDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F+   VS K+ L EF+V   D+   VG       F  G  +DV+G++ GKGF
Sbjct: 61  VNKPLKGHFAKSGVSLKRFLKEFKVDNIDE-YEVGQEIKADIFAEGDRIDVSGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G ++R N      +HG S  HR+ GS G   DP R FKNKKM G MG    TV NL+V 
Sbjct: 120 QGVIRRWNAQRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKKMPGHMGNKNTTVLNLQVA 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ +IL+KG VPG  K S++ ++D+ K+
Sbjct: 179 KVIPEKNIILIKGGVPGPNK-SFVSIKDTVKA 209


>gi|259047555|ref|ZP_05737956.1| 50S ribosomal protein L3 [Granulicatella adiacens ATCC 49175]
 gi|259035746|gb|EEW37001.1| 50S ribosomal protein L3 [Granulicatella adiacens ATCC 49175]
          Length = 210

 Score =  269 bits (688), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 85/212 (40%), Positives = 126/212 (59%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT  +   G  IPVTV+ +    V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGKKVGMTQYFTEAGELIPVTVVEVTPNVVLQLKTIENDGYEAVQLGFDDLREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            ++P +G  +  N +PK+ + EF    +     VG   +   F  G +VDVTG + GKGF
Sbjct: 61  SNRPAKGHVAKANATPKRFIREFN-NVELSEYEVGQEITVDVFKAGDIVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    P RVFK K + G+MGG+R+T++NLEVV
Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGGASFPSRVFKGKALPGQMGGDRITIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R +IL+KG VPG+KK S + ++ + KS
Sbjct: 179 KVDAERNVILIKGNVPGSKK-SLVEIKTAIKS 209


>gi|221234243|ref|YP_002516679.1| 50S ribosomal protein L3 [Caulobacter crescentus NA1000]
 gi|13422579|gb|AAK23229.1| ribosomal protein L3 [Caulobacter crescentus CB15]
 gi|220963415|gb|ACL94771.1| LSU ribosomal protein L3P [Caulobacter crescentus NA1000]
          Length = 267

 Score =  269 bits (688), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 121/218 (55%), Positives = 156/218 (71%), Gaps = 2/218 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GV+A+KLGMT  ++  G+ +PVTVL LD CQV   RT++K+GY A+Q+GAG  K KN 
Sbjct: 19  RTGVIAKKLGMTRFFDEAGQHVPVTVLSLDGCQVTGVRTVEKDGYTALQLGAGAKKAKNT 78

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           S  MRG F+   V PK+ + EFRV+++  L+ VG+  +  +F  GQ VD+ G+T+GKGF+
Sbjct: 79  SNAMRGHFAKAAVEPKRVVAEFRVEEN-ALIEVGAELTADHFVAGQKVDIQGVTVGKGFA 137

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F  KKMAG +G   VT  N+ V  
Sbjct: 138 GAMKRWNFGGLRATHGVSVSHRSHGSTGNRQDPGRTFPGKKMAGHLGQETVTTLNVTVWK 197

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           VD +RGLILVKG VPG  + S++ VRD+ K A+     
Sbjct: 198 VDVERGLILVKGAVPG-HEGSYVKVRDAVKKALPADAP 234


>gi|259415840|ref|ZP_05739760.1| 50S ribosomal protein L3 [Silicibacter sp. TrichCH4B]
 gi|259347279|gb|EEW59056.1| 50S ribosomal protein L3 [Silicibacter sp. TrichCH4B]
          Length = 239

 Score =  269 bits (688), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 133/215 (61%), Positives = 161/215 (74%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  +G++IPVTVL LD  QVV  RT DK+GY AVQ+GAG AKVK 
Sbjct: 1   MRSGIIAKKVGMTRLFMEDGKQIPVTVLSLDGLQVVAQRTEDKDGYTAVQLGAGSAKVKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK MRG F++  V PK+KL EFRV   D L+ VG+  S  +F  GQ VDVTG +IGKGF
Sbjct: 61  VSKAMRGHFAASKVEPKRKLVEFRV-PADGLIEVGAEISAEHFLTGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D  RGL+ +KG VPG  K+ W+ V+D+ K    
Sbjct: 180 KTDADRGLVFIKGAVPGP-KSGWVTVKDAVKKKAP 213


>gi|91774635|ref|YP_544391.1| 50S ribosomal protein L3P [Methylobacillus flagellatus KT]
 gi|122985649|sp|Q1H4N7|RL3_METFK RecName: Full=50S ribosomal protein L3
 gi|91708622|gb|ABE48550.1| LSU ribosomal protein L3P [Methylobacillus flagellatus KT]
          Length = 214

 Score =  269 bits (688), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 95/212 (44%), Positives = 129/212 (60%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  EG  +PVTVL +   +V   +T   +GY ++QV  GE +   
Sbjct: 1   MSLGLIGRKVGMTRIFTDEGESVPVTVLEVVPNRVTQIKTAASDGYTSLQVAYGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           + K + G ++   VS    + EF V  D      VG   +   F  GQLVDVTG ++GKG
Sbjct: 61  IGKALAGHYAKAGVSAGAGIKEFPVSDDVLANYSVGGQITVELFQPGQLVDVTGTSLGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSGA+KRHNF   RA+HG S SH   GS G  QDPGRVF  K+M G +G  + TV+NLE+
Sbjct: 121 FSGAIKRHNFSSNRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMPGHLGAVKTTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+L+KG VPG+ K   ++VR S K
Sbjct: 181 VRVDAERNLLLIKGAVPGS-KGGDVVVRPSVK 211


>gi|209964040|ref|YP_002296955.1| ribosomal protein L3 [Rhodospirillum centenum SW]
 gi|226730556|sp|B6IRQ6|RL3_RHOCS RecName: Full=50S ribosomal protein L3
 gi|209957506|gb|ACI98142.1| ribosomal protein L3 [Rhodospirillum centenum SW]
          Length = 235

 Score =  269 bits (688), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 131/219 (59%), Positives = 162/219 (73%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+KLGMT V+  EG  +PVTVL LD  QVV  RT D++GY A+Q+GAG+AKVKN
Sbjct: 1   MRSGLIAQKLGMTRVFTDEGEHVPVTVLKLDQVQVVAQRTEDRDGYTALQLGAGKAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K  R  F+   V PKKKL EFRV  D  L+ VG+  +  +F  GQ VDVTG TIG+GF
Sbjct: 61  VAKAQREQFARAKVEPKKKLVEFRVTPD-ALIEVGAEITADHFVPGQFVDVTGTTIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G M+R NFGGLRATHGVS+SHRSHGSTG RQDPG+ FKNKKMAG  G  +VTV+NL+VV
Sbjct: 120 TGPMRRWNFGGLRATHGVSVSHRSHGSTGGRQDPGKTFKNKKMAGHYGVEKVTVQNLKVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            VD +RGLILVKG +PG  +  W+L+RD+ K  +     
Sbjct: 180 QVDVERGLILVKGAIPG-HEGGWVLIRDAVKKKLPDGAP 217


>gi|197287068|ref|YP_002152940.1| 50S ribosomal protein L3 [Proteus mirabilis HI4320]
 gi|227354934|ref|ZP_03839348.1| 50S ribosomal protein L3 [Proteus mirabilis ATCC 29906]
 gi|226730550|sp|B4F1I4|RL3_PROMH RecName: Full=50S ribosomal protein L3
 gi|194684555|emb|CAR46379.1| 50S ribosomal protein L3 [Proteus mirabilis HI4320]
 gi|227165016|gb|EEI49855.1| 50S ribosomal protein L3 [Proteus mirabilis ATCC 29906]
          Length = 209

 Score =  269 bits (688), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 97/210 (46%), Positives = 134/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++N +V   + L+K+GY A+QV  G  K   V 
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKDLEKDGYRAIQVTTGSKKANRVL 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L EFR+ + ++   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRLLREFRLNEGEE-YTVGQSISVEIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG++G  +VTV++LEVV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGQLGNEQVTVQSLEVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|153009286|ref|YP_001370501.1| 50S ribosomal protein L3 [Ochrobactrum anthropi ATCC 49188]
 gi|166233170|sp|A6X0B8|RL3_OCHA4 RecName: Full=50S ribosomal protein L3
 gi|151561174|gb|ABS14672.1| ribosomal protein L3 [Ochrobactrum anthropi ATCC 49188]
          Length = 238

 Score =  268 bits (687), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 134/219 (61%), Positives = 163/219 (74%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT VYN  G  +PVTVL ++NC VV  RT++KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGLAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+   V PK K+ EFRV  D +LL VG+  +  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSKAMRGHFAKAEVEPKAKVAEFRVSPD-NLLEVGAEITAEHFVAGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNF G RA+HG SI+HR+HGSTG RQDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 120 AGVMKRHNFAGHRASHGNSITHRAHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           S D  RGLILV+G VPG+ K +WI+VRD+ K ++     
Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWIIVRDAVKVSLPENAP 217


>gi|294142933|ref|YP_003558911.1| 50S ribosomal protein L3 [Shewanella violacea DSS12]
 gi|293329402|dbj|BAJ04133.1| ribosomal protein L3 [Shewanella violacea DSS12]
          Length = 212

 Score =  268 bits (687), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 91/213 (42%), Positives = 132/213 (61%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  +PVTV+ + + +V   +TL+ +GY A+QV  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFCEDGVSVPVTVIEITSNRVTQVKTLETDGYRALQVTTGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++KP  G F+   V   + L+E R+  D+ + + VG+  +   F     VDVTG + GKG
Sbjct: 61  ITKPEAGHFAKAGVEAGRGLWEVRLANDEGEGIEVGAELNVDIFADIAKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF     THG S++HRS+GS G  Q PGRVFK KKM+G MG  RVT +NL V
Sbjct: 121 FQGGIKRWNFHAQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLNV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           + VD +R L+LVKG VPGA   + I ++ + K+
Sbjct: 181 IRVDAERNLLLVKGAVPGAINGNLI-IKPAVKA 212


>gi|300114736|ref|YP_003761311.1| 50S ribosomal protein L3 [Nitrosococcus watsonii C-113]
 gi|299540673|gb|ADJ28990.1| 50S ribosomal protein L3 [Nitrosococcus watsonii C-113]
          Length = 213

 Score =  268 bits (687), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 100/213 (46%), Positives = 142/213 (66%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  EG  IPVTV+     ++   +TL+++GY A QV  GE +   
Sbjct: 1   MAIGLIGRKIGMTRVFTDEGASIPVTVIEATPNRISQVKTLERDGYQAAQVTVGERRPAR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP++G F+   V P +KL EFR +   +  + VG     S F VGQ VDV G+T G+G
Sbjct: 61  VTKPLKGHFAKAKVEPGRKLREFRFEIQKEKNIEVGDELKVSLFEVGQRVDVIGVTRGRG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G ++R++FGG  A+HG S+SHR+ GS G  Q PGRVFK KKMAG+MG  R TV+NLE+
Sbjct: 121 FAGVVRRYHFGGGDASHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGQMGNVRRTVQNLEL 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD++R L+L+KG +PGA     ++V+ + KS
Sbjct: 181 VRVDEERQLLLIKGAIPGAPGGD-VIVKPAVKS 212


>gi|23502110|ref|NP_698237.1| 50S ribosomal protein L3 [Brucella suis 1330]
 gi|42559647|sp|Q8G076|RL3_BRUSU RecName: Full=50S ribosomal protein L3
 gi|23348070|gb|AAN30152.1| ribosomal protein L3 [Brucella suis 1330]
          Length = 237

 Score =  268 bits (687), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 138/219 (63%), Positives = 164/219 (74%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT VYN  G  +PVTVL ++NC VV  RT++KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGVAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+   V PK KL EFRV  D +LL VG   +  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSKAMRGHFAKAEVEPKAKLAEFRVSPD-NLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           S D  RGLILV+G VPG+ K +WILVRD+ K+++     
Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASLPENAP 217


>gi|114570345|ref|YP_757025.1| 50S ribosomal protein L3P [Maricaulis maris MCS10]
 gi|122315784|sp|Q0ANQ0|RL3_MARMM RecName: Full=50S ribosomal protein L3
 gi|114340807|gb|ABI66087.1| LSU ribosomal protein L3P [Maricaulis maris MCS10]
          Length = 268

 Score =  268 bits (687), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 130/211 (61%), Positives = 162/211 (76%), Gaps = 2/211 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GVVARKLGMT ++  +G  +P TVLH+DN QVV H+T D++GY+A+Q+GAGEAK K  
Sbjct: 7   RTGVVARKLGMTRIFAEDGSHVPCTVLHMDNVQVVSHKTADRDGYVALQLGAGEAKAKRT 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            K MRG F+   V+PK+KL EFRV +D  L+ VGS  +  +F  GQ VDV G++IGKGF+
Sbjct: 67  PKAMRGHFAKAKVAPKRKLVEFRVAED-ALIEVGSELTADHFVPGQKVDVAGISIGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           GAMKRH FGGLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +N+EVV 
Sbjct: 126 GAMKRHGFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNIEVVR 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VD +RG++LVKG VPG+    W+ +RD+ K 
Sbjct: 186 VDVERGIVLVKGAVPGSA-GGWVELRDAIKG 215


>gi|300690160|ref|YP_003751155.1| 50S ribosomal subunit protein L3 [Ralstonia solanacearum PSI07]
 gi|299077220|emb|CBJ49846.2| 50S ribosomal subunit protein L3 [Ralstonia solanacearum PSI07]
          Length = 220

 Score =  268 bits (687), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 94/213 (44%), Positives = 128/213 (60%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V+  +G  IPVTVL +   +V   +T + +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + + EFR+       L +G       F VGQ +DV G TIGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEIIVEFRIDAAKAAELKLGDTIDVDLFAVGQKIDVQGTTIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RA+HG S SH   GS G  QDPGRVF  K+M G MG    TV+NL +
Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LVKG VPGA K+ +++V  + K+
Sbjct: 181 VRVDAERKLLLVKGAVPGA-KSGFVVVSPAVKA 212


>gi|304321440|ref|YP_003855083.1| 50S ribosomal protein L3 [Parvularcula bermudensis HTCC2503]
 gi|303300342|gb|ADM09941.1| 50S ribosomal protein L3 [Parvularcula bermudensis HTCC2503]
          Length = 309

 Score =  268 bits (687), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 131/226 (57%), Positives = 165/226 (73%), Gaps = 9/226 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE------ 55
           R+GV+A+KLGMT VY  EG  +P TV+ L+NCQVV HRT +++GY A+Q+GAGE      
Sbjct: 24  RTGVIAKKLGMTRVYTAEGTHVPCTVVSLENCQVVSHRTEERDGYSALQLGAGEYLNRKG 83

Query: 56  -AKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGM 114
            AK+  VSK  RG F+  NV+PK+KL EFRV+ D  L+ +G+  +  ++  GQ VDV G 
Sbjct: 84  EAKLGRVSKAARGHFAKANVTPKRKLAEFRVETDY-LIEIGASLTAEHYVPGQRVDVVGT 142

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           +IGKGF+G MKRHNFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT 
Sbjct: 143 SIGKGFAGGMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGDVRVTT 202

Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
           +NLEV+  D  RGLIL+KG VPG+ K SWIL+RD+ K     +  +
Sbjct: 203 QNLEVIRTDVARGLILLKGAVPGS-KGSWILIRDAVKRVRPEEAPM 247


>gi|256159968|ref|ZP_05457686.1| 50S ribosomal protein L3 [Brucella ceti M490/95/1]
 gi|256255199|ref|ZP_05460735.1| 50S ribosomal protein L3 [Brucella ceti B1/94]
 gi|261222395|ref|ZP_05936676.1| 50S ribosomal protein L3 [Brucella ceti B1/94]
 gi|265998360|ref|ZP_06110917.1| 50S ribosomal protein L3 [Brucella ceti M490/95/1]
 gi|260920979|gb|EEX87632.1| 50S ribosomal protein L3 [Brucella ceti B1/94]
 gi|262552828|gb|EEZ08818.1| 50S ribosomal protein L3 [Brucella ceti M490/95/1]
          Length = 237

 Score =  268 bits (687), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 137/219 (62%), Positives = 163/219 (74%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT VYN  G  +PVTVL ++NC VV  RT++KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+   V PK KL EFRV  D +LL VG   +  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSKAMRGHFAKAEVEPKAKLAEFRVSPD-NLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG  A+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHHASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           S D  RGLILV+G VPG+ K +WILVRD+ K+++     
Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASLPENAP 217


>gi|160932201|ref|ZP_02079592.1| hypothetical protein CLOLEP_01036 [Clostridium leptum DSM 753]
 gi|156868803|gb|EDO62175.1| hypothetical protein CLOLEP_01036 [Clostridium leptum DSM 753]
          Length = 210

 Score =  268 bits (686), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 90/212 (42%), Positives = 129/212 (60%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +K+GMT +++  G+ +PVTV+    C V   +T++ +GY AVQ+G G+ K   
Sbjct: 1   MQKGIIGKKIGMTQIFDENGKVVPVTVVEAGPCVVSQKKTVENDGYAAVQIGFGDLKAHK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V KPM G F+  NV+PK+ L EFR   D D   VG +     F  G  VDVTG + GKG+
Sbjct: 61  VKKPMAGHFAKANVAPKRTLREFRFD-DIDAYNVGDLVKADVFAAGDKVDVTGTSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF  L+ +HG     R  GS G   DP RV+  KKMAG +G  RVTV+NL+VV
Sbjct: 120 AGVIKRWNFQRLKESHGSGPVARHGGSIGSCSDPSRVYPGKKMAGHLGSERVTVQNLQVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  LI +KG +PG    + + + D+ K+
Sbjct: 180 KVDAENNLIAIKGAIPGPNGGTVV-IHDTVKA 210


>gi|218135281|ref|ZP_03464085.1| hypothetical protein BACPEC_03186 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990666|gb|EEC56677.1| hypothetical protein BACPEC_03186 [Bacteroides pectinophilus ATCC
           43243]
          Length = 211

 Score =  268 bits (686), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 91/211 (43%), Positives = 124/211 (58%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G   PVTVL    C V   +TL+ +GY AVQVG  + + K 
Sbjct: 1   MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTLENDGYEAVQVGFADKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+G F    VS K+ + EFR +   +   V        F  G  +D T ++ GKGF
Sbjct: 61  VNKPMKGHFDKAGVSYKRFVREFRFENASE-YNVKDEIKADIFAAGDKIDATAISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    PGRVFK K M G+MG  R+T++NLEVV
Sbjct: 120 QGAIKRHGQSRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGQMGAKRITIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +  +ILVKG VPG KK S + ++++ K
Sbjct: 179 RVDAENNIILVKGAVPGPKK-SLVTLKETVK 208


>gi|254714301|ref|ZP_05176112.1| 50S ribosomal protein L3 [Brucella ceti M644/93/1]
 gi|254717738|ref|ZP_05179549.1| 50S ribosomal protein L3 [Brucella ceti M13/05/1]
 gi|261219581|ref|ZP_05933862.1| 50S ribosomal protein L3 [Brucella ceti M13/05/1]
 gi|261322076|ref|ZP_05961273.1| 50S ribosomal protein L3 [Brucella ceti M644/93/1]
 gi|260924670|gb|EEX91238.1| 50S ribosomal protein L3 [Brucella ceti M13/05/1]
 gi|261294766|gb|EEX98262.1| 50S ribosomal protein L3 [Brucella ceti M644/93/1]
          Length = 237

 Score =  268 bits (686), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 137/219 (62%), Positives = 164/219 (74%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT VYN  G  +PVT+L ++NC VV  RT++KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRVYNDAGEHVPVTILRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+   V PK KL EFRV  D +LL VG   +  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSKAMRGHFAKAEVEPKAKLAEFRVSPD-NLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           S D  RGLILV+G VPG+ K +WILVRD+ K+++     
Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASLPENAP 217


>gi|187776576|ref|ZP_02993049.1| hypothetical protein CLOSPO_00090 [Clostridium sporogenes ATCC
           15579]
 gi|187775235|gb|EDU39037.1| hypothetical protein CLOSPO_00090 [Clostridium sporogenes ATCC
           15579]
          Length = 216

 Score =  268 bits (686), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 87/212 (41%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +KLGMT ++N  G+ IPVTV+    C V+  +T++K+GY A+QV  G+ + K 
Sbjct: 8   MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 67

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP++G F+   VS K+ + EF++ +D + L VG       F  G+ VD++G++ GKGF
Sbjct: 68  RNKPVKGHFAKAGVSVKRHIKEFKL-EDSNSLEVGQEIKADVFEAGERVDISGVSKGKGF 126

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G ++R N      THG S  HR+ GS G   DP R FKNK+M G MG    TV NLEVV
Sbjct: 127 QGTIRRWNAHRGPMTHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 185

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  ++ LIL+KG VPG  K   + +R++ K+
Sbjct: 186 RIIPEKNLILIKGGVPGPNKG-LVQIRNTVKA 216


>gi|161485649|ref|NP_420061.2| 50S ribosomal protein L3 [Caulobacter crescentus CB15]
 gi|42559686|sp|Q9A8V3|RL3_CAUCR RecName: Full=50S ribosomal protein L3
          Length = 255

 Score =  268 bits (686), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 121/218 (55%), Positives = 156/218 (71%), Gaps = 2/218 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GV+A+KLGMT  ++  G+ +PVTVL LD CQV   RT++K+GY A+Q+GAG  K KN 
Sbjct: 7   RTGVIAKKLGMTRFFDEAGQHVPVTVLSLDGCQVTGVRTVEKDGYTALQLGAGAKKAKNT 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           S  MRG F+   V PK+ + EFRV+++  L+ VG+  +  +F  GQ VD+ G+T+GKGF+
Sbjct: 67  SNAMRGHFAKAAVEPKRVVAEFRVEEN-ALIEVGAELTADHFVAGQKVDIQGVTVGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F  KKMAG +G   VT  N+ V  
Sbjct: 126 GAMKRWNFGGLRATHGVSVSHRSHGSTGNRQDPGRTFPGKKMAGHLGQETVTTLNVTVWK 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           VD +RGLILVKG VPG  + S++ VRD+ K A+     
Sbjct: 186 VDVERGLILVKGAVPG-HEGSYVKVRDAVKKALPADAP 222


>gi|332187797|ref|ZP_08389531.1| 50S ribosomal protein L3 [Sphingomonas sp. S17]
 gi|332012147|gb|EGI54218.1| 50S ribosomal protein L3 [Sphingomonas sp. S17]
          Length = 244

 Score =  268 bits (686), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 130/219 (59%), Positives = 161/219 (73%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+KLGMT ++  +GR +PVTVL L+  QVV  R +D++GY AVQ+GAG AK KN
Sbjct: 1   MRTGVIAKKLGMTRLFQDDGRHVPVTVLALEGVQVVARREMDRDGYTAVQLGAGVAKTKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP RG F    V PK+ L EFRV  +D LL VG+  +  +F  GQ VD+ G T GKGF
Sbjct: 61  VAKPQRGHFGKAEVEPKQVLVEFRV-NEDGLLDVGAEIAADHFVPGQYVDIQGRTQGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGRVFKNKKMAG MG    T +NLE+V
Sbjct: 120 AGAMKRWNFGGLRATHGVSVSHRSHGSTGNRQDPGRVFKNKKMAGHMGDKNRTQQNLEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           S D +RGLI VKG VPG+ K  W++V+D+ K + +    
Sbjct: 180 STDVERGLIFVKGSVPGS-KGGWLIVKDAVKVSRHADAP 217


>gi|239832122|ref|ZP_04680451.1| 50S ribosomal protein L3 [Ochrobactrum intermedium LMG 3301]
 gi|239824389|gb|EEQ95957.1| 50S ribosomal protein L3 [Ochrobactrum intermedium LMG 3301]
          Length = 246

 Score =  268 bits (686), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 135/219 (61%), Positives = 164/219 (74%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT VYN  G  +PVTVL ++NC VV  RT++KNGY AVQ+G G AKVKN
Sbjct: 9   MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGIAKVKN 68

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+   V PK K+ EFRV  D +LL VG+  +  +F  GQ VDVTG +IGKGF
Sbjct: 69  TSKAMRGHFAKAEVEPKAKVAEFRVSPD-NLLEVGAEITAEHFVAGQKVDVTGTSIGKGF 127

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HR+HGSTG RQDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 128 AGVMKRHNFGGHRASHGNSITHRAHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 187

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           S D  RGLILV+G VPG+ K +WI+VRD+ K ++     
Sbjct: 188 STDSDRGLILVRGAVPGS-KGAWIIVRDAVKVSLPENAP 225


>gi|260584416|ref|ZP_05852163.1| 50S ribosomal protein L3 [Granulicatella elegans ATCC 700633]
 gi|260157934|gb|EEW93003.1| 50S ribosomal protein L3 [Granulicatella elegans ATCC 700633]
          Length = 210

 Score =  268 bits (686), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 86/212 (40%), Positives = 126/212 (59%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT  +   G  IPVTV+ +    V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGKKVGMTQYFTEAGELIPVTVVEVTPNVVLQLKTIENDGYEAVQLGFDDLREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            ++P +G  +  N +PK+ + EF    +     VG   +   F  G +VDVTG + GKGF
Sbjct: 61  SNRPAKGHVAKANATPKRFIREFN-NVELSEYEVGQEITVDVFKAGDIVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    P RVFK K + G+MGGNR+T++NLEVV
Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGGASFPSRVFKGKALPGQMGGNRITIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R +IL+KG VPG+KK S + ++ + KS
Sbjct: 179 KVDAERNVILIKGNVPGSKK-SLVEIKTAIKS 209


>gi|187476539|ref|YP_784563.1| 50S ribosomal protein L3 [Bordetella avium 197N]
 gi|109893413|sp|Q2L2G0|RL3_BORA1 RecName: Full=50S ribosomal protein L3
 gi|115421125|emb|CAJ47609.1| 50S ribosomal protein L3 [Bordetella avium 197N]
          Length = 233

 Score =  268 bits (686), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 100/216 (46%), Positives = 130/216 (60%), Gaps = 3/216 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+V RK+GMT ++  EG  IPVTVL + N +V   ++L+ +GY A+QV  G  +   V
Sbjct: 16  RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQVKSLESDGYAAIQVTYGNRRASRV 75

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119
           +K   G F+         L EFR+          GSV +    F  GQ VDVTG TIGKG
Sbjct: 76  TKAEAGHFAKAGAEAGSILKEFRLDPTRAAEFTAGSVIAVESVFEAGQQVDVTGTTIGKG 135

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRHNFG  RA+HG S SHR  GS G  QDPGR+F  K+MAG +G    TV+NL+V
Sbjct: 136 FAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMAGHLGDVTRTVQNLDV 195

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           V VD +RGL+LVKG VPG      ++VR + K+   
Sbjct: 196 VRVDVERGLLLVKGAVPG-HAGGDVIVRPAVKAPAK 230


>gi|300718705|ref|YP_003743508.1| 50S ribosomal protein L3 [Erwinia billingiae Eb661]
 gi|299064541|emb|CAX61661.1| 50S ribosomal protein L3 [Erwinia billingiae Eb661]
          Length = 209

 Score =  268 bits (686), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 135/210 (64%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   ++L+ +GY A+QV AG  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYTAIQVTAGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR  + D+   VG   +   F+  + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRTVEGDEF-AVGQSINVDIFSDVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA     ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGCDLIVKPAVKA 209


>gi|238792938|ref|ZP_04636568.1| 50S ribosomal protein L3 [Yersinia intermedia ATCC 29909]
 gi|238727792|gb|EEQ19316.1| 50S ribosomal protein L3 [Yersinia intermedia ATCC 29909]
          Length = 209

 Score =  268 bits (685), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 132/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   ++L+ +GY AVQV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYRAVQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+ +  +    G   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLPEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG MG  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGHMGDERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   + I V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGATGGNLI-VKPAVKA 209


>gi|163745537|ref|ZP_02152897.1| ribosomal protein L3 [Oceanibulbus indolifex HEL-45]
 gi|161382355|gb|EDQ06764.1| ribosomal protein L3 [Oceanibulbus indolifex HEL-45]
          Length = 292

 Score =  268 bits (685), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 128/215 (59%), Positives = 158/215 (73%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSGV+A+K+GMT ++  +G++IPVTVL LD  QVV  RT D++GY AVQ+GAG AK K 
Sbjct: 2   LRSGVIAKKVGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTADRDGYTAVQLGAGSAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ MRG F++  V PK+K+ EFRV  +  +L VG      ++  GQ VDV G +IGKGF
Sbjct: 62  TSQAMRGHFAAAKVEPKRKVAEFRVDAE-AMLEVGEEIIADHYFAGQYVDVAGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NLEVV
Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D  RGLI+VKG VPG+ K  W+ V+D+ K    
Sbjct: 181 KTDSARGLIMVKGAVPGS-KGGWVTVKDAVKKPFP 214


>gi|307946286|ref|ZP_07661621.1| 50S ribosomal protein L3 [Roseibium sp. TrichSKD4]
 gi|307769950|gb|EFO29176.1| 50S ribosomal protein L3 [Roseibium sp. TrichSKD4]
          Length = 240

 Score =  268 bits (685), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 132/215 (61%), Positives = 161/215 (74%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT +YN  G  +PVTVL L+ CQVV HRT +KNGY A+QVG G AKV+N
Sbjct: 1   MRSGVIAQKVGMTRIYNDAGANVPVTVLRLEKCQVVAHRTEEKNGYTALQVGVGLAKVRN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
             K MRG ++   V PK+KL EFRV  D +++ VG+  +  ++  GQ VDVTG +IGKGF
Sbjct: 61  TPKAMRGHYAVAKVEPKRKLAEFRVSAD-NMIDVGAEITADHYVEGQFVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SISHRSHGSTG  QDPGRVFK KKMAG MG  RVT +NL+VV
Sbjct: 120 AGVMKRHNFGGGRASHGNSISHRSHGSTGQCQDPGRVFKGKKMAGHMGDARVTTQNLKVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D +RGLI+V+G VPG  K  WILVRD+ K A+ 
Sbjct: 180 RTDVERGLIMVEGSVPG-TKGGWILVRDAIKKALP 213


>gi|212708981|ref|ZP_03317109.1| hypothetical protein PROVALCAL_00013 [Providencia alcalifaciens DSM
           30120]
 gi|212688347|gb|EEB47875.1| hypothetical protein PROVALCAL_00013 [Providencia alcalifaciens DSM
           30120]
          Length = 209

 Score =  268 bits (685), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++N +V   +T + +GY A+QV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKTAETDGYNAIQVTTGSKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L EFR ++  +   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRILREFRTEEGAEF-NVGQSISVEIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSNLIVKPAVKA 209


>gi|296268550|ref|YP_003651182.1| 50S ribosomal protein L3 [Thermobispora bispora DSM 43833]
 gi|296091337|gb|ADG87289.1| ribosomal protein L3 [Thermobispora bispora DSM 43833]
          Length = 218

 Score =  268 bits (685), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 94/215 (43%), Positives = 128/215 (59%), Gaps = 2/215 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            GV+ +KLGMT V++   R +PVTV+    C V   RT +K+GY A+Q+G G+   + V+
Sbjct: 6   KGVLGKKLGMTQVFDEANRVVPVTVVEAGPCVVTRVRTPEKDGYSAIQLGYGQIDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+  +    N++P++   E R   D     +G   +   F  G  VDVTG + GKGF+G
Sbjct: 66  KPLGDYLRKHNITPRRYFAEIRTD-DASEYTLGQEITVDIFQPGDYVDVTGRSKGKGFAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F GL  +HG    HRS GS G    PGRVFK  +MAGRMG  R TV+NL+V +V
Sbjct: 125 VMKRHGFRGLGGSHGTQRKHRSPGSIGACATPGRVFKGLRMAGRMGNARTTVQNLKVQAV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           D ++ LILVKG +PGA   S +L+R + K     K
Sbjct: 185 DAEKNLILVKGAIPGAN-GSLVLIRTAVKKGAAAK 218


>gi|163733828|ref|ZP_02141270.1| ribosomal protein L3 [Roseobacter litoralis Och 149]
 gi|161392939|gb|EDQ17266.1| ribosomal protein L3 [Roseobacter litoralis Och 149]
          Length = 286

 Score =  268 bits (685), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 128/215 (59%), Positives = 161/215 (74%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSGV+A+K+GMT ++  +G++IPVTVL LD  QVV  RT DK+GY AVQ+GAG AK K 
Sbjct: 2   LRSGVIAKKVGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTSDKDGYSAVQLGAGTAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ MRG F++  V PK+K+ EFRV  + +L+ VG   + +++  GQ VDV G +IGKGF
Sbjct: 62  TSQAMRGHFAAAKVEPKRKVAEFRVDAE-NLIGVGEEITANHYFEGQFVDVAGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D  RGLI+VKG VPG+ K  W+ V+D+ K    
Sbjct: 181 RTDADRGLIMVKGAVPGS-KGGWVTVKDAVKKPFP 214


>gi|37528543|ref|NP_931888.1| 50S ribosomal protein L3 [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|42559593|sp|Q7MYF1|RL3_PHOLL RecName: Full=50S ribosomal protein L3
 gi|36787981|emb|CAE17098.1| 50S ribosomal protein L3 [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 209

 Score =  268 bits (685), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 93/210 (44%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ +++ +V   + LD +GY A+QV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIEDNRVTQVKELDNDGYRAIQVTTGSKKASRVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L EFR+ + ++   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRILREFRLSEGEE-YAVGQSISVEIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    A+HG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDASHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPG+   + I V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGSTGGNLI-VKPAVKA 209


>gi|284006163|emb|CBA71405.1| 50S ribosomal protein L3 [Arsenophonus nasoniae]
          Length = 209

 Score =  268 bits (685), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 135/210 (64%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++N +V   ++L+ +GY A+QV  G  K   V 
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKSLETDGYNAIQVTTGSKKANRVK 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L EFR+ ++++   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRILREFRLSENEEFT-VGQSISVEIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSNLIVKPAVKA 209


>gi|319899099|ref|YP_004159192.1| 50S ribosomal protein L3 [Bartonella clarridgeiae 73]
 gi|319403063|emb|CBI76618.1| 50S ribosomal protein L3 [Bartonella clarridgeiae 73]
          Length = 246

 Score =  268 bits (685), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 133/219 (60%), Positives = 161/219 (73%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT +YN  G  +PVTVL LD CQVV  RT++KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLDKCQVVAQRTVEKNGYTAVQLGVGLAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ +RG F+   V PK K+ EFRV  D +LL VG+  +  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSRALRGHFAKAAVEPKAKIAEFRVSPD-NLLDVGTEITVEHFVPGQRVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HR+HGSTG  QDPG+VFK KKMAG MG  RVT +N+EV+
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNVEVI 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           S D  RGLILV+G V G+ K SWILVRD+ K  +     
Sbjct: 180 STDVDRGLILVRGSVSGS-KGSWILVRDAVKKRLPDNAP 217


>gi|320094580|ref|ZP_08026346.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319978495|gb|EFW10072.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 221

 Score =  268 bits (685), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 95/209 (45%), Positives = 135/209 (64%), Gaps = 2/209 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RK+GMT V++ +GR +P+TV+ +    V   RT + +GY A+Q+G GE   + V+KP
Sbjct: 15  LLGRKIGMTQVWDADGRLVPLTVVQVGTNVVTQVRTEEVDGYSAIQLGFGEIDPRKVTKP 74

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           ++G F+   V+P++ L E R  + D    VG     S F  GQ VDV+G T GKGF+G M
Sbjct: 75  LQGHFAKAGVAPRRHLAEVRTSEHDS-YEVGQELDASTFEAGQSVDVSGNTKGKGFAGVM 133

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH F G+ A+HG   +HR  GS G    PGR+FK  +MAGRMGGNR TV+NL + +VD 
Sbjct: 134 KRHGFAGVSASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGGNRRTVQNLRIQAVDT 193

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           ++GL+L+ G +PG  KN  +LVR + K A
Sbjct: 194 EKGLLLISGAIPGP-KNGVVLVRSAVKGA 221


>gi|317049840|ref|YP_004117488.1| 50S ribosomal protein L3 [Pantoea sp. At-9b]
 gi|316951457|gb|ADU70932.1| 50S ribosomal protein L3 [Pantoea sp. At-9b]
          Length = 208

 Score =  268 bits (685), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 97/210 (46%), Positives = 134/210 (63%), Gaps = 3/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG+V +K+GMT ++  +G  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   V+
Sbjct: 2   SGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKTLENDGYQAIQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR +   +   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRTEG--EEYSVGQNISVEIFAEVKKVDVTGTSKGKGFAG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++LEVV V
Sbjct: 120 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLEVVRV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 180 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 208


>gi|110678718|ref|YP_681725.1| ribosomal protein L3 [Roseobacter denitrificans OCh 114]
 gi|123362126|sp|Q16AF4|RL3_ROSDO RecName: Full=50S ribosomal protein L3
 gi|109454834|gb|ABG31039.1| ribosomal protein L3 [Roseobacter denitrificans OCh 114]
          Length = 286

 Score =  268 bits (685), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 126/215 (58%), Positives = 161/215 (74%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSGV+A+K+GMT ++  +G++IPVTVL LD  QVV  RT +K+GY AVQ+GAG AK K 
Sbjct: 2   LRSGVIAKKVGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTSEKDGYSAVQLGAGTAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ MRG F++  V PK+K+ EFRV  + +L+ VG   + +++  GQ VDV G +IGKGF
Sbjct: 62  TSQAMRGHFAAAKVEPKRKVAEFRVDPE-NLIGVGEEITANHYFEGQFVDVAGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVSISHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D  RGLI+VKG VPG+ K  W+ V+D+ K    
Sbjct: 181 RTDANRGLIMVKGAVPGS-KGGWVTVKDAVKKPFP 214


>gi|110833258|ref|YP_692117.1| 50S ribosomal protein L3 [Alcanivorax borkumensis SK2]
 gi|123149718|sp|Q0VSK3|RL3_ALCBS RecName: Full=50S ribosomal protein L3
 gi|110646369|emb|CAL15845.1| 50S ribosomal protein L3 [Alcanivorax borkumensis SK2]
          Length = 211

 Score =  267 bits (684), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 98/214 (45%), Positives = 130/214 (60%), Gaps = 3/214 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GV+ RK GMT V+  EG  +PVTV+ +   +V   +T + +GY AVQV  GE +   
Sbjct: 1   MAIGVIGRKCGMTRVFTEEGVSVPVTVIEVGPNRVSQVKTEESDGYQAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+   V   + ++EFR   +      GS  +   F  GQ++DVTG + GKGF
Sbjct: 61  VTKAQAGHFAKAGVEAGRGVWEFR--AEAGEFEAGSSVTVEGFEAGQMIDVTGTSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF    ATHG S+SHR+ GS G  Q PGRVFK KKMAG +G  RVTV+NLEVV
Sbjct: 119 AGGVKRWNFSTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHLGAERVTVQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            VD  + L+LVKG VPGA     ++VR + K+  
Sbjct: 179 RVDADKNLLLVKGAVPGATGGD-VIVRLAVKAKA 211


>gi|222148366|ref|YP_002549323.1| 50S ribosomal protein L3 [Agrobacterium vitis S4]
 gi|254803647|sp|B9JVN7|RL3_AGRVS RecName: Full=50S ribosomal protein L3
 gi|221735354|gb|ACM36317.1| 50S ribosomal protein L3 [Agrobacterium vitis S4]
          Length = 213

 Score =  267 bits (684), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 148/215 (68%), Positives = 173/215 (80%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  +PVTVL LDNCQV+  RT+DK+GY AVQ+GAG+AKVKN
Sbjct: 1   MRSGVIAQKVGMTRVYNDAGEHVPVTVLRLDNCQVLAQRTVDKHGYTAVQLGAGQAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F++ NV PK KL EFRV +D +L+ VGS     +F  GQLVDVTG TIGKGF
Sbjct: 61  TSKAMRGNFAAANVEPKAKLVEFRVSED-NLMDVGSELKAGHFEAGQLVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRATHGVS+SHRSHGSTG  QDPG+V+K K+MAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRHNFGGLRATHGVSVSHRSHGSTGSNQDPGKVWKGKRMAGHMGQTRVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           S D+ RGLILVKG VPG+ K SWI+VRD+ KSA  
Sbjct: 180 STDEDRGLILVKGAVPGS-KGSWIIVRDAVKSAAK 213


>gi|307294974|ref|ZP_07574816.1| 50S ribosomal protein L3 [Sphingobium chlorophenolicum L-1]
 gi|306879448|gb|EFN10666.1| 50S ribosomal protein L3 [Sphingobium chlorophenolicum L-1]
          Length = 251

 Score =  267 bits (684), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 128/219 (58%), Positives = 160/219 (73%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR IPVTVL L+  QVV  + ++++GY+AVQ+GAG AKVKN
Sbjct: 1   MRTGVIAKKVGMTRLFQEDGRHIPVTVLALEGNQVVARKEVERDGYVAVQLGAGVAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP RG F+   V PK +L EFRV +D  LL VG+  +  +F  GQLVDV G T GKGF
Sbjct: 61  VAKPQRGHFAKAEVEPKARLVEFRVAED-ALLDVGAEIAADHFIAGQLVDVAGHTQGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR  FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG    T +NLE+V
Sbjct: 120 AGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRERTQQNLEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
             D +RGL+ VKG VPGA K +W+ V D+ K        
Sbjct: 180 RTDVERGLLFVKGSVPGA-KGTWLTVSDAVKVKRPADAP 217


>gi|292492421|ref|YP_003527860.1| ribosomal protein L3 [Nitrosococcus halophilus Nc4]
 gi|291581016|gb|ADE15473.1| ribosomal protein L3 [Nitrosococcus halophilus Nc4]
          Length = 216

 Score =  267 bits (684), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 101/215 (46%), Positives = 140/215 (65%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RKLGMT V+  EG  IPVTV+     ++   +TL+++ Y A+QV  GE +   
Sbjct: 1   MAIGLVGRKLGMTRVFTDEGESIPVTVIEATPNRISQIKTLERDSYRALQVTLGEKRPSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP++G F+   V P +KL EFR+ + +      GS      F  GQ VDVTG T G+G
Sbjct: 61  VTKPLKGHFAKAGVEPGRKLHEFRLAEGEGADAEAGSELKVGLFEAGQKVDVTGTTRGRG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G ++R+ FGG  A+HG S+SHR+ GS G  Q PGRVFK KKMAG+MG  + TV+NLE+
Sbjct: 121 FAGVVRRYRFGGGDASHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGQMGNVQRTVQNLEL 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           V VD++R L+LVKG +PGA     + V+ + K+AV
Sbjct: 181 VRVDEERHLLLVKGAIPGAPGGDVV-VKPAAKAAV 214


>gi|309782834|ref|ZP_07677554.1| 50S ribosomal protein L3 [Ralstonia sp. 5_7_47FAA]
 gi|308918258|gb|EFP63935.1| 50S ribosomal protein L3 [Ralstonia sp. 5_7_47FAA]
          Length = 221

 Score =  267 bits (684), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 92/216 (42%), Positives = 128/216 (59%), Gaps = 2/216 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTVL + + +V   +T + +GY AVQV  G  +   
Sbjct: 5   MSLGLVGRKVGMTRIFTDDGDSIPVTVLEVGDNRVTQIKTDETDGYTAVQVTFGTRRASR 64

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + + EFRV          G+  S   F VGQ +DV G+TIGKG
Sbjct: 65  VTKPLAGHLAKAGVEAGEVIKEFRVDAARAAEFQPGANISVDLFEVGQKIDVQGVTIGKG 124

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RA+HG S SH   GS G  QDPGRVF  K+M G MG    TV+NLE+
Sbjct: 125 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLEI 184

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             +D +R L+LVKG +PGA K   ++V  + K+   
Sbjct: 185 AKIDAERKLLLVKGAIPGA-KGGQVIVTPAVKARAK 219


>gi|307132839|ref|YP_003884855.1| 50S ribosomal subunit protein L3 [Dickeya dadantii 3937]
 gi|306530368|gb|ADN00299.1| 50S ribosomal subunit protein L3 [Dickeya dadantii 3937]
          Length = 209

 Score =  267 bits (684), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 97/210 (46%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKTLENDGYSAVQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L EFR+  D +   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRVLREFRL-ADGEEFAVGQDISVEIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|94498476|ref|ZP_01305032.1| ribosomal protein L3 [Sphingomonas sp. SKA58]
 gi|94422019|gb|EAT07064.1| ribosomal protein L3 [Sphingomonas sp. SKA58]
          Length = 252

 Score =  267 bits (684), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 128/219 (58%), Positives = 161/219 (73%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR +PVTVL L+  QVV  +  D++GY+AVQ+GAG AKVKN
Sbjct: 2   MRTGVIAKKVGMTRLFQEDGRHVPVTVLALEGNQVVARKETDRDGYIAVQLGAGVAKVKN 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP RG F+   V PK +L EFRV +D  LL VG+  +  +F  GQLVDV G T GKGF
Sbjct: 62  VAKPQRGQFAKAEVEPKARLVEFRVAED-ALLDVGAEIAADHFVAGQLVDVAGHTQGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR  FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG    T +NLE+V
Sbjct: 121 AGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRERTQQNLEIV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
             D +RGL+ VKG VPGA K +W+ V+D+ K   +    
Sbjct: 181 RTDVERGLLFVKGSVPGA-KGTWLTVKDAVKVPRHADAP 218


>gi|15889242|ref|NP_354923.1| 50S ribosomal protein L3 [Agrobacterium tumefaciens str. C58]
 gi|42559664|sp|Q8UE18|RL3_AGRT5 RecName: Full=50S ribosomal protein L3
 gi|15157069|gb|AAK87708.1| 50S ribosomal protein L3 [Agrobacterium tumefaciens str. C58]
          Length = 213

 Score =  267 bits (684), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 141/215 (65%), Positives = 170/215 (79%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  IPVTVL LDN QVV  RT DKNGY AVQ+GAG++KVKN
Sbjct: 1   MRSGVIAQKVGMTRVYNDAGEHIPVTVLRLDNVQVVAQRTEDKNGYTAVQLGAGQSKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +K +RG F++ NV PK KL EFRV  + +L+ +G+  + ++F  GQLVDVTG TIGKGF
Sbjct: 61  TTKALRGHFAAANVEPKAKLVEFRVSPE-NLIDIGATLTANHFQSGQLVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGG RA+HG S+SHR+HGSTG  QDPGRV+K K+MAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRHNFGGGRASHGNSVSHRAHGSTGNNQDPGRVWKGKRMAGHMGQTRVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           S D+ RGLILVKG VPG+ K SWI+VRD+ KSA  
Sbjct: 180 STDEDRGLILVKGAVPGS-KGSWIIVRDAVKSAAK 213


>gi|301104340|ref|XP_002901255.1| 50S ribosomal protein L3-2 [Phytophthora infestans T30-4]
 gi|262101189|gb|EEY59241.1| 50S ribosomal protein L3-2 [Phytophthora infestans T30-4]
          Length = 285

 Score =  267 bits (684), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 105/211 (49%), Positives = 135/211 (63%), Gaps = 2/211 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K+GM  V++  G R   TVL ++ CQV   +T D++G+ A+Q+G G  K KNV
Sbjct: 39  RTGLLAVKIGMMPVWDNFGYRHNCTVLQVEECQVTQVKTADRHGFNALQLGVGLRKPKNV 98

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SKP+ G  S   V  K++L EFRV +D  LLP+G+  S  +F  GQ VDV G++ GKGF 
Sbjct: 99  SKPVLGHLSKAGVPAKRQLQEFRVSED-ALLPLGTTLSALHFNAGQYVDVCGISKGKGFQ 157

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MK HNF G  A+HG S + R  GSTG  QDPG+VFK KKM GRMGGNRVT  NL +  
Sbjct: 158 GVMKLHNFAGQPASHGNSKTQRHMGSTGQCQDPGKVFKGKKMPGRMGGNRVTRDNLWIAK 217

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +D  R LI VKG VPG      + V D+ K 
Sbjct: 218 IDVDRNLIYVKGSVPG-NNGGIVRVTDARKK 247


>gi|225387237|ref|ZP_03757001.1| hypothetical protein CLOSTASPAR_00989 [Clostridium asparagiforme
           DSM 15981]
 gi|225046655|gb|EEG56901.1| hypothetical protein CLOSTASPAR_00989 [Clostridium asparagiforme
           DSM 15981]
          Length = 211

 Score =  267 bits (684), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 86/211 (40%), Positives = 124/211 (58%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT +++  G  IPVTVL    C V   +T+D +GY AVQVG  + + K 
Sbjct: 1   MKKAILATKVGMTQIFDENGVLIPVTVLQAGPCVVTQVKTVDNDGYKAVQVGFVDKRDKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G F    VS K+ + E R++  ++   V        F  G  +D T ++ GKGF
Sbjct: 61  VNKPQKGHFDKAGVSYKRYVRELRLENAEE-YSVKDEIKADIFAQGDKIDATAISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR+        HG S  HR  GS G    PGRVFK K M G+MG  ++T++NLEVV
Sbjct: 120 QGAIKRYGQSRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGQMGNKQITIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +  L+L+KG VPG KK S + ++++ K
Sbjct: 179 KVDTENNLLLIKGAVPGPKK-SLVTIKETVK 208


>gi|167463902|ref|ZP_02328991.1| Ribosomal protein L3 [Paenibacillus larvae subsp. larvae
           BRL-230010]
 gi|322381126|ref|ZP_08055129.1| 50S ribosomal protein L3-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321154702|gb|EFX46973.1| 50S ribosomal protein L3-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 208

 Score =  267 bits (684), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 88/212 (41%), Positives = 121/212 (57%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT V+  EG  +PVTV+    C V+  +  + +GY A+QVG  + K K 
Sbjct: 1   MTKGILGKKLGMTQVFTPEGLVVPVTVIQAGPCVVLQKKDSENDGYEAIQVGFEDKKEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP  G     N +PK+ + EFR  +  D   VG       F  G+ VDVTG + GKGF
Sbjct: 61  ANKPEIGHAKKANTTPKRYVQEFRGVQLSD-YEVGQELKADLFAEGEFVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRHN      +HG S  HR  GS G      RVFK K + G MG   VT++NL+V+
Sbjct: 120 QGVIKRHNQSRGPMSHG-SRYHRGPGSMGSIA-ANRVFKGKNLPGHMGHETVTLQNLQVI 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R +ILVKG +PG  KNS++ V+ + K 
Sbjct: 178 KVDAERNVILVKGSIPGP-KNSYVKVQSAVKK 208


>gi|317494342|ref|ZP_07952756.1| 50S ribosomal protein L3 [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917592|gb|EFV38937.1| 50S ribosomal protein L3 [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 209

 Score =  267 bits (684), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 98/210 (46%), Positives = 132/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   +TLD +GY AVQV  G  K   VS
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKTLDNDGYCAVQVTTGAKKANRVS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L EFR+ + ++   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRTLREFRLNEGEEFT-VGQSISVEIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA     I V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGATGGDLI-VKPAVKA 209


>gi|291521898|emb|CBK80191.1| 50S ribosomal protein L3, bacterial [Coprococcus catus GD/7]
          Length = 209

 Score =  267 bits (684), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 96/212 (45%), Positives = 129/212 (60%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++  K+GMT V++ +G   PVTVL    C V   +T++ +GY AVQVG G+ + K 
Sbjct: 1   MKKAILTTKVGMTQVFSEDGVLTPVTVLQAGPCVVTQVKTVENDGYSAVQVGFGDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G F+   V+ K+ L EFR+ +D +   +G       F  G  VD T  + GKGF
Sbjct: 61  VNKPKKGHFAKAGVTAKRFLKEFRL-EDAESYTLGQEIKADVFVAGDKVDATAKSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    PGRVFK K M G MG  RVTV+NLEVV
Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGSATTPGRVFKGKHMPGHMGAVRVTVQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           SVD ++ LILVKG VPG KK S +++++S K+
Sbjct: 179 SVDAEKNLILVKGAVPGPKK-SLVMLKESVKA 209


>gi|83594020|ref|YP_427772.1| 50S ribosomal protein L3 [Rhodospirillum rubrum ATCC 11170]
 gi|109893549|sp|Q2RQW0|RL3_RHORT RecName: Full=50S ribosomal protein L3
 gi|83576934|gb|ABC23485.1| LSU ribosomal protein L3P [Rhodospirillum rubrum ATCC 11170]
          Length = 235

 Score =  267 bits (684), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 129/215 (60%), Positives = 159/215 (73%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  EG  +PVTVL ++ CQVV  RT + +GY AVQ+GAG AKVK 
Sbjct: 1   MRSGLIAQKVGMTRLFTDEGTHVPVTVLKVEACQVVAVRTSETDGYTAVQLGAGVAKVKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F++  V PKKK+ EFRV +D  LL  G+  S ++F  GQ VD+ G TIGKGF
Sbjct: 61  TSKAMRGHFAAAKVEPKKKVVEFRVSEDC-LLEPGAELSAAHFVAGQKVDIAGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNF GL ATHGVS+SHRSHGSTG  QDPGRVFK KKMAG MG  R+T ++L VV
Sbjct: 120 AGAMKRHNFRGLEATHGVSVSHRSHGSTGQCQDPGRVFKGKKMAGHMGDTRITQQSLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           + D  RGLILVKG VPGA   +W+ VRD+ K  + 
Sbjct: 180 ATDADRGLILVKGSVPGAD-GAWLEVRDAVKKKLP 213


>gi|307136201|gb|ADN34039.1| 50S ribosomal protein l3 [Cucumis melo subsp. melo]
          Length = 328

 Score =  267 bits (683), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 105/214 (49%), Positives = 146/214 (68%), Gaps = 2/214 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GV+A K GM+ +++  G RIP+TVL +D+  V   +T++K G  A+Q+G G+ K K++
Sbjct: 79  RTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKEGITALQIGCGQKKEKHL 138

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SKP  G F +  V  K+KL EF V +D  LLPVG+     +F  GQ VDVTG++ GKGF 
Sbjct: 139 SKPELGHFRAQGVPLKRKLKEFPVSQD-ALLPVGTEIGARHFVPGQYVDVTGISRGKGFQ 197

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F G+ A+HG S+SHRS GSTG R  PG+VFK +KMAGRMGG + TVKN+ +  
Sbjct: 198 GVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGGKQRTVKNVWIYK 257

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           +D  R LI VKG +PGA+  S++ ++D+    +N
Sbjct: 258 IDPARNLIWVKGPIPGAE-GSFVFIKDAMYKRLN 290


>gi|78221846|ref|YP_383593.1| 50S ribosomal protein L3 [Geobacter metallireducens GS-15]
 gi|109893431|sp|Q39Y06|RL3_GEOMG RecName: Full=50S ribosomal protein L3
 gi|78193101|gb|ABB30868.1| LSU ribosomal protein L3P [Geobacter metallireducens GS-15]
          Length = 210

 Score =  267 bits (683), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 92/212 (43%), Positives = 129/212 (60%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++A+KLGMT ++  +GRRIPVTV+    C V+  +T++ +GY A+QVG        
Sbjct: 1   MKKGLIAKKLGMTQIFADDGRRIPVTVVEAGPCIVLQKKTVETDGYNAIQVGFLAKDADK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
             + + G   S        + EFRV +D D   +G   +   F  G  VDVTG +IGKGF
Sbjct: 61  SGRALVGHCKSAGQGVFTYIREFRV-EDVDRYTIGDSITAEIFAPGDYVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR  F G R++HG S  HR+ GS G    P RVFKNKKM G++G  RVTV+ L+VV
Sbjct: 120 QGVIKRWGFRGGRSSHG-SCFHRAPGSIGSSAWPSRVFKNKKMPGQLGNERVTVQRLQVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD    L+L++G +PGA KN  +L++DS K+
Sbjct: 179 RVDTADNLLLIRGAIPGA-KNGILLLKDSVKA 209


>gi|229594830|ref|XP_001032401.3| ribosomal protein L3 containing protein [Tetrahymena thermophila]
 gi|225566556|gb|EAR84738.3| ribosomal protein L3 containing protein [Tetrahymena thermophila
           SB210]
          Length = 439

 Score =  267 bits (683), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 99/216 (45%), Positives = 144/216 (66%), Gaps = 2/216 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++  KLGMT +++  G+   +TV+ +D CQVV  +T +K+G  A+Q+G GE  +K +
Sbjct: 185 RTGILGYKLGMTSIWDKWGKLHALTVIQIDRCQVVQVKTEEKDGVNALQLGVGEKSLKRI 244

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G     ++ PK+ L EF+V  D   LP G + S  +F  GQ VD+ G+++GKGF+
Sbjct: 245 NKPTIGHLMKNDIPPKRHLKEFKVSPDC-FLPAGYMLSARHFVPGQYVDIQGISVGKGFA 303

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR NF    ATHG S+SHR+ GSTG RQDPGRVFKNKKMAG MG  +VT+ +L+V  
Sbjct: 304 GTVKRWNFKMQDATHGNSLSHRAPGSTGQRQDPGRVFKNKKMAGHMGCEKVTIMDLQVYK 363

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           +D +R L+ ++G VPG    S + +RD+FK  V  +
Sbjct: 364 IDVERSLVYIRGHVPGKP-GSLVQIRDAFKKQVQNE 398


>gi|15612697|ref|NP_241000.1| 50S ribosomal protein L3 [Bacillus halodurans C-125]
 gi|7674305|sp|Q9Z9L4|RL3_BACHD RecName: Full=50S ribosomal protein L3
 gi|4512404|dbj|BAA75271.1| rplC homologue (identity of 81% to B. subtilis ) [Bacillus
           halodurans]
 gi|10172746|dbj|BAB03853.1| 50S ribosomal protein L3 [Bacillus halodurans C-125]
          Length = 209

 Score =  267 bits (683), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 96/212 (45%), Positives = 130/212 (61%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+   G  IPVTV+      V+  +T+D +GY AVQ+G  + K  N
Sbjct: 1   MSKGILGKKVGMTQVFAENGDVIPVTVIEAAPNVVLQKKTVDSDGYEAVQLGFDDQKQNN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    +PK+ + E R    D+   VG       F  G +VDVTG + GKGF
Sbjct: 61  ANKPEKGHAAKAETAPKRFIKEIRGVNLDE-FEVGQEIKVDAFAEGDIVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GA+KRHN      +HG S  HR  GS G   DP RVFK K + GRMGG +VTV+NLE++
Sbjct: 120 AGAIKRHNQARGPMSHG-SRYHRRPGSMGPV-DPNRVFKGKALPGRMGGEQVTVQNLEII 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGAKK S++ VR + KS
Sbjct: 178 KVDAERNLLLVKGNVPGAKK-SYVTVRSAIKS 208


>gi|330432124|gb|AEC17183.1| 50S ribosomal protein L3 [Gallibacterium anatis UMN179]
          Length = 209

 Score =  267 bits (683), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 96/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT ++N +G  IPVTV+ ++  +V   +TL+ +GY AVQV  G  K  +V+
Sbjct: 2   IGLIGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTLETDGYCAVQVTTGSKKASHVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V   + L+EFRV + ++   +G   +   F   + VDVTG + GKG++G
Sbjct: 62  KPEAGHFVKAGVEAGRGLWEFRVAEGEEFT-LGQEINVDIFADVKKVDVTGTSKGKGYAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKM+G +G  RVTV++LEVV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGRVFKGKKMSGHLGNERVTVQSLEVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA     I V+ + K+
Sbjct: 181 DAERKLLLVKGAVPGATGGDLI-VKPAVKA 209


>gi|329898794|ref|ZP_08272466.1| LSU ribosomal protein L3p (L3e) [gamma proteobacterium IMCC3088]
 gi|328920746|gb|EGG28208.1| LSU ribosomal protein L3p (L3e) [gamma proteobacterium IMCC3088]
          Length = 211

 Score =  267 bits (683), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 98/212 (46%), Positives = 128/212 (60%), Gaps = 1/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT V+  +G  IPVTV+ +   +V   + LD +GY A+QV  G  K   
Sbjct: 1   MTIGLVGRKTGMTRVFTEDGVSIPVTVVEVSPNRVTQIKELDADGYRAIQVTTGTRKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G ++   V     L+EFR++  +D   VG+  +   F VGQ VDV G + GKGF
Sbjct: 61  VNKSAAGHYAKAGVEAGVGLWEFRLEAGEDAPEVGAELTVGRFEVGQKVDVAGKSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF    ATHG S+SHR+ GS G  Q PGRVFK KKMAG+MG   VT + LEVV
Sbjct: 121 QGGVKRWNFKMQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGQMGNVAVTTQGLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA     + VR + K+
Sbjct: 181 RVDAERNLLLIKGAVPGAPGGDVV-VRPAVKA 211


>gi|251787971|ref|YP_003002692.1| 50S ribosomal protein L3 [Dickeya zeae Ech1591]
 gi|247536592|gb|ACT05213.1| ribosomal protein L3 [Dickeya zeae Ech1591]
          Length = 209

 Score =  267 bits (683), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 99/210 (47%), Positives = 134/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  EG  IPVTV+ ++  +V   +TL+ +GY AVQV AG  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEEGVSIPVTVIEIEANRVTQVKTLENDGYRAVQVTAGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L EFR+  D +   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRVLREFRL-ADSEEFAVGQDISVEIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|323173956|gb|EFZ59584.1| ribosomal protein L3 family protein [Escherichia coli LT-68]
          Length = 209

 Score =  267 bits (683), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 96/210 (45%), Positives = 134/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+ + ++  PVG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLAEGEEF-PVGQSISVELFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|239825693|ref|YP_002948317.1| 50S ribosomal protein L3 [Geobacillus sp. WCH70]
 gi|259646548|sp|C5D3R7|RL3_GEOSW RecName: Full=50S ribosomal protein L3
 gi|239805986|gb|ACS23051.1| ribosomal protein L3 [Geobacillus sp. WCH70]
          Length = 211

 Score =  267 bits (683), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 88/215 (40%), Positives = 127/215 (59%), Gaps = 4/215 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++K+GY A+Q+G  +   K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTIEKDGYEAIQLGFEDISEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP  G  +  N +PK+ + E R    D+   VG       F  G +VDVTG++ GKGF
Sbjct: 61  ANKPQIGHAAKANTAPKRFIREIRGANIDE-YEVGQEVKVDIFAEGDIVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    P RVFK+K++ GRMGG RVT++NL++V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGAIA-PNRVFKSKELPGRMGGQRVTIQNLKIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            VD +R L+L+KG VPG +K   ++V+ + K+   
Sbjct: 178 KVDPERNLLLIKGNVPGPRKG-LVIVKSAVKAKAK 211


>gi|253998014|ref|YP_003050077.1| 50S ribosomal protein L3 [Methylovorus sp. SIP3-4]
 gi|313200081|ref|YP_004038739.1| 50S ribosomal protein L3 [Methylovorus sp. MP688]
 gi|253984693|gb|ACT49550.1| ribosomal protein L3 [Methylovorus sp. SIP3-4]
 gi|312439397|gb|ADQ83503.1| ribosomal protein L3 [Methylovorus sp. MP688]
          Length = 214

 Score =  267 bits (683), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 93/215 (43%), Positives = 131/215 (60%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  EG  IPVTVL +   +V   +T   +GY  +QV  GE +   
Sbjct: 1   MSLGLIGRKVGMTRVFTDEGESIPVTVLEVVPNRVTQVKTPSSDGYAGLQVAHGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K + G ++   V+    + EF V +D      VG   +   F  GQ VDVTG+++GKG
Sbjct: 61  VTKALAGHYAKAGVAAGSGIKEFAVAEDVLANYAVGGQITVELFQAGQYVDVTGVSLGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+GA+KRHNF   RA+HG S SH   GS G  QDPGRVF  K+M G +G  + TV+NL++
Sbjct: 121 FAGAIKRHNFSSNRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMPGHLGAVKTTVQNLQI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           V VD +R L+L+KG VPG+ K   ++VR + K+  
Sbjct: 181 VRVDAERNLLLIKGAVPGS-KGGDVVVRPAVKAGA 214


>gi|167767803|ref|ZP_02439856.1| hypothetical protein CLOSS21_02338 [Clostridium sp. SS2/1]
 gi|317497095|ref|ZP_07955422.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167710542|gb|EDS21121.1| hypothetical protein CLOSS21_02338 [Clostridium sp. SS2/1]
 gi|291558860|emb|CBL37660.1| LSU ribosomal protein L3P [butyrate-producing bacterium SSC/2]
 gi|316895640|gb|EFV17795.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 209

 Score =  267 bits (683), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 88/212 (41%), Positives = 127/212 (59%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++  K+GMT ++N +G   PVTVL    C V   +T + +GY AVQVG  + K K 
Sbjct: 1   MKKAILTTKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTEENDGYSAVQVGFVDKKEKG 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G F    V+PK+ + EFR +  ++   VG       F  G  +D T  + GKG+
Sbjct: 61  INKPQKGHFDKAGVAPKRFVREFRFENAEE-YTVGQEIKADIFAAGDKIDATATSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH      + HG S  HR  GS G   DP +VFK KKM G+MG  RVT++NLE+V
Sbjct: 120 AGGIKRHGLKSGPSAHG-SKYHRHAGSNGMASDPSKVFKGKKMPGQMGAERVTIQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  + +ILVKG VPG KK S +++++S K+
Sbjct: 179 KVDADQNIILVKGAVPGPKK-SLVMLKESVKA 209


>gi|256821662|ref|YP_003145625.1| 50S ribosomal protein L3 [Kangiella koreensis DSM 16069]
 gi|256795201|gb|ACV25857.1| ribosomal protein L3 [Kangiella koreensis DSM 16069]
          Length = 210

 Score =  267 bits (683), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 99/212 (46%), Positives = 128/212 (60%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V  K GMT V+  +G  IPVTV+  D  ++   +T D +GY AVQ+  G  K   
Sbjct: 1   MAIGIVGIKRGMTRVFTEDGVSIPVTVVEADPNRIAQLKTTDVDGYEAVQITTGSRKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SK   G +    V   + L+EFRV    D   VG V     F  GQ VDVTG + GKG+
Sbjct: 61  ISKAEAGHYKKAGVEAGRSLWEFRV-NSLDGFEVGGVVKVDIFEAGQKVDVTGTSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF G  +THG S+SHR+ GS G  Q PGRVFK KKM+G MG  RVTV+ LEVV
Sbjct: 120 AGVIKRWNFRGQDSTHGNSLSHRAPGSIGQNQTPGRVFKGKKMSGHMGAERVTVQTLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA     ++VR + K+
Sbjct: 180 RVDAERNLLLIKGAVPGATGGD-VIVRPAEKA 210


>gi|254427943|ref|ZP_05041650.1| ribosomal protein L3 [Alcanivorax sp. DG881]
 gi|196194112|gb|EDX89071.1| ribosomal protein L3 [Alcanivorax sp. DG881]
          Length = 211

 Score =  267 bits (683), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 98/214 (45%), Positives = 130/214 (60%), Gaps = 3/214 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GV+ RK GMT V+  EG  +PVTV+ +   +V   +T + +GY AVQV  GE +   
Sbjct: 1   MAIGVIGRKCGMTRVFTEEGVSVPVTVIEVSPNRVSQVKTEESDGYQAVQVTVGERRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+   V   + ++EFR   +      GS  +   F  GQ++DVTG + GKGF
Sbjct: 61  VTKAQAGHFAKAGVEAGRGVWEFR--AEAGEFEAGSAVTVEGFEAGQMIDVTGSSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF    ATHG S+SHR+ GS G  Q PGRVFK KKMAG +G  RVTV+NLEVV
Sbjct: 119 AGGVKRWNFSTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHLGAERVTVQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            VD  + L+LVKG VPGA     ++VR + K+  
Sbjct: 179 RVDADKNLLLVKGAVPGATGGD-VIVRLAVKAKA 211


>gi|294010613|ref|YP_003544073.1| ribosomal protein L3 [Sphingobium japonicum UT26S]
 gi|292673943|dbj|BAI95461.1| ribosomal protein L3 [Sphingobium japonicum UT26S]
          Length = 251

 Score =  267 bits (683), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 128/219 (58%), Positives = 160/219 (73%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+GV+A+K+GMT ++  +GR IPVTVL L+  QVV  + ++++GY+AVQ+GAG AKVKN
Sbjct: 1   MRTGVIAKKVGMTRLFQEDGRHIPVTVLALEGNQVVARKEVERDGYVAVQLGAGVAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP RG F+   V PK +L EFRV +D  LL VG+  +  +F  GQLVDV G T GKGF
Sbjct: 61  VAKPQRGHFAKAEVEPKARLVEFRVAED-ALLDVGAEIAADHFIAGQLVDVAGHTQGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR  FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG    T +NLE+V
Sbjct: 120 AGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRERTQQNLEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
             D +RGL+ VKG VPGA K +W+ V D+ K        
Sbjct: 180 RTDVERGLLFVKGSVPGA-KGTWLTVCDAVKVKRPADAP 217


>gi|148381421|ref|YP_001255962.1| ribosomal protein L3 [Clostridium botulinum A str. ATCC 3502]
 gi|153932935|ref|YP_001385796.1| 50S ribosomal protein L3 [Clostridium botulinum A str. ATCC 19397]
 gi|153937726|ref|YP_001389203.1| 50S ribosomal protein L3 [Clostridium botulinum A str. Hall]
 gi|166233132|sp|A7FZ69|RL3_CLOB1 RecName: Full=50S ribosomal protein L3
 gi|166233133|sp|A5I7K6|RL3_CLOBH RecName: Full=50S ribosomal protein L3
 gi|148290905|emb|CAL85041.1| 50S ribosomal protein L3 [Clostridium botulinum A str. ATCC 3502]
 gi|152928979|gb|ABS34479.1| 50S ribosomal protein L3 [Clostridium botulinum A str. ATCC 19397]
 gi|152933640|gb|ABS39139.1| 50S ribosomal protein L3 [Clostridium botulinum A str. Hall]
          Length = 209

 Score =  267 bits (683), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 85/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +KLGMT ++N  G+ IPVTV+    C V+  +T++K+GY A+QV  G+ + K 
Sbjct: 1   MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP++G F+   VS K+ + EF++ +D + L +G       F  G+ VD++G++ GKGF
Sbjct: 61  RNKPIKGHFAKAGVSVKRHIKEFKL-EDSNSLEIGQEIKADVFEAGERVDISGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G ++R N      +HG S  HR+ GS G   DP R FKNK+M G MG    TV NLEVV
Sbjct: 120 QGTIRRWNAHRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  ++ LIL+KG VPG  K   + +R++ K+
Sbjct: 179 RIIPEKNLILIKGGVPGPNKG-LVQIRNTVKA 209


>gi|311109612|ref|YP_003982465.1| 50S ribosomal protein L3 [Achromobacter xylosoxidans A8]
 gi|310764301|gb|ADP19750.1| ribosomal protein L3 [Achromobacter xylosoxidans A8]
          Length = 229

 Score =  267 bits (683), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 100/216 (46%), Positives = 132/216 (61%), Gaps = 3/216 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+V RK+GMT ++  EG  IPVTVL + N +V   ++L+ +GY A+QV  G  +   V
Sbjct: 12  RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQVKSLETDGYAAIQVAYGTRRASRV 71

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119
           ++P  G ++         L EFR+          GSV +    F  GQ VDVTG TIGKG
Sbjct: 72  AQPQTGHYAKAGAEAGSILKEFRLDPARAAEFAAGSVIAVESVFEAGQQVDVTGTTIGKG 131

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRHNFG  RA+HG S SHR  GS G  QDPGR+F  K+MAG +G    TV+NL+V
Sbjct: 132 FAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMAGHLGDVTRTVQNLDV 191

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           V VD +RGL+LVKG VPG    + I+VR + K+   
Sbjct: 192 VRVDVERGLLLVKGAVPG-HAGADIIVRPAIKAPAK 226


>gi|302390958|ref|YP_003826778.1| 50S ribosomal protein L3P [Acetohalobium arabaticum DSM 5501]
 gi|302203035|gb|ADL11713.1| LSU ribosomal protein L3P [Acetohalobium arabaticum DSM 5501]
          Length = 209

 Score =  267 bits (682), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 92/212 (43%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ +K+GMT +++ EG  IPVTV+    C +V  +T +K+GY A+Q+G GEAK   
Sbjct: 1   MTREILGKKVGMTQIFDDEGEVIPVTVIEAGPCSIVQKKTEEKDGYKAIQLGFGEAKESK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP++G F    V PK+ + E R+ ++D+   VG       F VG  VDVTG + GKGF
Sbjct: 61  LNKPLKGHFDKYGVEPKEYIREVRINEEDE-YEVGDEIKADIFAVGDRVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF     THG S ++R  GS G   DP RVFK KKM GRMG  +VT++NL+V 
Sbjct: 120 AGTVKRWNFNLGPKTHG-SRNYRLPGSIGASADPARVFKGKKMPGRMGREQVTIQNLKVA 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD ++ ++ VKG VPG KK + + +++S K 
Sbjct: 179 KVDPEKNILAVKGAVPGPKK-ALVRIKESVKG 209


>gi|295401920|ref|ZP_06811883.1| 50S ribosomal protein L3 [Geobacillus thermoglucosidasius C56-YS93]
 gi|312109261|ref|YP_003987577.1| 50S ribosomal protein L3 [Geobacillus sp. Y4.1MC1]
 gi|294976050|gb|EFG51665.1| 50S ribosomal protein L3 [Geobacillus thermoglucosidasius C56-YS93]
 gi|311214362|gb|ADP72966.1| 50S ribosomal protein L3 [Geobacillus sp. Y4.1MC1]
          Length = 211

 Score =  267 bits (682), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 88/215 (40%), Positives = 128/215 (59%), Gaps = 4/215 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++K+GY A+Q+G  +   K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTIEKDGYEAIQLGFEDLSEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP  G  +  N +PK+ + E R    D+   VG       F+ G +VDVTG++ GKGF
Sbjct: 61  ANKPQIGHAAKANTAPKRFIREIRGANIDE-YEVGQEVKVDIFSEGDIVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    P RVFK+K++ GRMGG RVT++NL++V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGAIA-PNRVFKSKELPGRMGGQRVTIQNLKIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            VD +R L+L+KG VPG +K   ++V+ + K+   
Sbjct: 178 KVDPERNLLLIKGNVPGPRKG-LVIVKSAVKAKAK 211


>gi|227821756|ref|YP_002825726.1| 50S ribosomal protein L3 [Sinorhizobium fredii NGR234]
 gi|227340755|gb|ACP24973.1| 50S ribosomal protein L3 [Sinorhizobium fredii NGR234]
          Length = 257

 Score =  267 bits (682), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 141/213 (66%), Positives = 171/213 (80%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  IPVTVL L+NCQVV  RT +KNGY AVQ+GAG +KVKN
Sbjct: 30  MRSGVIAQKVGMTRVYNDAGEHIPVTVLRLENCQVVAQRTEEKNGYTAVQLGAGRSKVKN 89

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +K +RG F++ +V PK K+ EFRV  D +L+ +G+  + S+F  GQLVDVTG TIGKGF
Sbjct: 90  TTKALRGHFAAASVEPKAKVVEFRVTAD-NLIDIGAELTASHFVAGQLVDVTGTTIGKGF 148

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GA+KRHNFGGLRATHGVS+SHRSHGSTG  QDPGRV+K K+MAG MG  RVT +NLEVV
Sbjct: 149 AGAIKRHNFGGLRATHGVSVSHRSHGSTGSNQDPGRVWKGKRMAGHMGQTRVTTQNLEVV 208

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           S D+ RGLILVKG VPG+ K +WI+VRD+ KS 
Sbjct: 209 STDEDRGLILVKGAVPGS-KGAWIVVRDAIKSG 240


>gi|222085675|ref|YP_002544205.1| 50S ribosomal protein L3 [Agrobacterium radiobacter K84]
 gi|221723123|gb|ACM26279.1| 50S ribosomal protein L3 [Agrobacterium radiobacter K84]
          Length = 219

 Score =  267 bits (682), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 147/215 (68%), Positives = 174/215 (80%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  +PVTVL ++ CQVV  RT++KNGY AVQ+GAG+AKVKN
Sbjct: 7   MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMEGCQVVAQRTVEKNGYTAVQLGAGQAKVKN 66

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK +RG F+  +V PK KL EFRV  DD+LL VG+    ++F+ GQLVDVTG TIGKGF
Sbjct: 67  TSKALRGHFAVASVEPKAKLVEFRVS-DDNLLEVGTEIKAAHFSAGQLVDVTGTTIGKGF 125

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG  RVT +NLEVV
Sbjct: 126 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 185

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           S D+ RGLILVKG VPG+ K +WI+VRD+ KSA  
Sbjct: 186 STDEDRGLILVKGAVPGS-KGAWIIVRDAVKSAAK 219


>gi|299473316|emb|CBN77715.1| Ribosomal protein L3 [Ectocarpus siliculosus]
          Length = 369

 Score =  267 bits (682), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 107/213 (50%), Positives = 139/213 (65%), Gaps = 2/213 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           RSG +A K+G   +++  G R PVTVL LD C+VV  +T + +GY ++Q+G GE K KNV
Sbjct: 117 RSGALAMKVGSMAIFDSWGVRHPVTVLQLDECEVVQVKTTETDGYTSLQLGVGERKTKNV 176

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP    F    V+PK+KL EFRV  +  LLPVG      +F  GQ VDV G + GKGF 
Sbjct: 177 NKPDAERFRRAGVNPKRKLMEFRVSAE-ALLPVGFQLRAQHFVAGQKVDVCGTSKGKGFQ 235

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR  F G RA+HGVS + R  GSTG  QDPGRVFK KKM GRMG +RVTV+NL+++ 
Sbjct: 236 GGMKRWGFKGQRASHGVSKTPRHIGSTGQCQDPGRVFKGKKMPGRMGTDRVTVQNLKILK 295

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           +D  R L+ V+G VPG +   ++ V D+ K A 
Sbjct: 296 MDPVRELLFVRGHVPG-QNGGFVRVTDAIKGAA 327


>gi|71278595|ref|YP_267622.1| 50S ribosomal protein L3 [Colwellia psychrerythraea 34H]
 gi|109893422|sp|Q487Z3|RL3_COLP3 RecName: Full=50S ribosomal protein L3
 gi|71144335|gb|AAZ24808.1| ribosomal protein L3 [Colwellia psychrerythraea 34H]
          Length = 212

 Score =  267 bits (682), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 96/213 (45%), Positives = 136/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V+  +G   PVTV+ ++  +V   +T+D +GY A+QV  G+ K   
Sbjct: 1   MTIGLVGRKVGMTRVFTEDGVSTPVTVIEVEANRVAQVKTVDNDGYSALQVTTGKRKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP  G F+   +   + L+EFR+ + +   +  GS  +   F   +LVDVTG + GKG
Sbjct: 61  VTKPAAGHFAKAGIEAGRGLWEFRLNENEGSDIEAGSEITVEVFNDTKLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHGVS+SHRS+GS G  Q PGRVFK KKM+G MG  R T +NLE+
Sbjct: 121 FQGGIKRWNFTMQHATHGVSLSHRSNGSLGQCQTPGRVFKGKKMSGHMGAVRCTTQNLEL 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+L+KG VPGA  N  ++++ + K+
Sbjct: 181 VRVDAERNLLLIKGAVPGAI-NGNVIIKPAVKA 212


>gi|22127860|ref|NP_671283.1| 50S ribosomal protein L3 [Yersinia pestis KIM 10]
 gi|45440067|ref|NP_991606.1| 50S ribosomal protein L3 [Yersinia pestis biovar Microtus str.
           91001]
 gi|51597988|ref|YP_072179.1| 50S ribosomal protein L3 [Yersinia pseudotuberculosis IP 32953]
 gi|108809254|ref|YP_653170.1| 50S ribosomal protein L3 [Yersinia pestis Antiqua]
 gi|108814019|ref|YP_649786.1| 50S ribosomal protein L3 [Yersinia pestis Nepal516]
 gi|145597452|ref|YP_001161527.1| 50S ribosomal protein L3 [Yersinia pestis Pestoides F]
 gi|150260743|ref|ZP_01917471.1| 50S ribosomal protein L3 [Yersinia pestis CA88-4125]
 gi|153948634|ref|YP_001402863.1| 50S ribosomal protein L3 [Yersinia pseudotuberculosis IP 31758]
 gi|162419265|ref|YP_001605175.1| 50S ribosomal protein L3 [Yersinia pestis Angola]
 gi|165927910|ref|ZP_02223742.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939998|ref|ZP_02228534.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str. IP275]
 gi|166010464|ref|ZP_02231362.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166213230|ref|ZP_02239265.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167398599|ref|ZP_02304123.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167418747|ref|ZP_02310500.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425639|ref|ZP_02317392.1| ribosomal protein L3 [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|170022544|ref|YP_001719049.1| 50S ribosomal protein L3 [Yersinia pseudotuberculosis YPIII]
 gi|186897184|ref|YP_001874296.1| 50S ribosomal protein L3 [Yersinia pseudotuberculosis PB1/+]
 gi|218927415|ref|YP_002345290.1| 50S ribosomal protein L3 [Yersinia pestis CO92]
 gi|229836309|ref|ZP_04456476.1| 50S ribosomal subunit protein L3 [Yersinia pestis Pestoides A]
 gi|229840067|ref|ZP_04460226.1| 50S ribosomal subunit protein L3 [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229842149|ref|ZP_04462304.1| 50S ribosomal subunit protein L3 [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229904551|ref|ZP_04519662.1| 50S ribosomal subunit protein L3 [Yersinia pestis Nepal516]
 gi|270488233|ref|ZP_06205307.1| 50S ribosomal protein L3 [Yersinia pestis KIM D27]
 gi|294502289|ref|YP_003566351.1| 50S ribosomal protein L3 [Yersinia pestis Z176003]
 gi|42559671|sp|Q8ZJA9|RL3_YERPE RecName: Full=50S ribosomal protein L3
 gi|55977743|sp|P11252|RL3_YERPS RecName: Full=50S ribosomal protein L3
 gi|123073062|sp|Q1CCU4|RL3_YERPN RecName: Full=50S ribosomal protein L3
 gi|123245521|sp|Q1C2U7|RL3_YERPA RecName: Full=50S ribosomal protein L3
 gi|166234609|sp|A4TGZ2|RL3_YERPP RecName: Full=50S ribosomal protein L3
 gi|166990943|sp|A7FNN5|RL3_YERP3 RecName: Full=50S ribosomal protein L3
 gi|226730592|sp|B2K5N0|RL3_YERPB RecName: Full=50S ribosomal protein L3
 gi|226730593|sp|A9R8Z6|RL3_YERPG RecName: Full=50S ribosomal protein L3
 gi|226730594|sp|B1JIW1|RL3_YERPY RecName: Full=50S ribosomal protein L3
 gi|21960995|gb|AAM87534.1|AE014002_7 50S ribosomal subunit protein L3 [Yersinia pestis KIM 10]
 gi|45434922|gb|AAS60483.1| 50S ribosomal protein L3 [Yersinia pestis biovar Microtus str.
           91001]
 gi|51591270|emb|CAH22936.1| 50S ribosomal protein L3 [Yersinia pseudotuberculosis IP 32953]
 gi|108777667|gb|ABG20186.1| LSU ribosomal protein L3P [Yersinia pestis Nepal516]
 gi|108781167|gb|ABG15225.1| LSU ribosomal protein L3P [Yersinia pestis Antiqua]
 gi|115346026|emb|CAL18892.1| 50S ribosomal protein L3 [Yersinia pestis CO92]
 gi|145209148|gb|ABP38555.1| LSU ribosomal protein L3P [Yersinia pestis Pestoides F]
 gi|149290151|gb|EDM40228.1| 50S ribosomal protein L3 [Yersinia pestis CA88-4125]
 gi|152960129|gb|ABS47590.1| ribosomal protein L3 [Yersinia pseudotuberculosis IP 31758]
 gi|162352080|gb|ABX86028.1| ribosomal protein L3 [Yersinia pestis Angola]
 gi|165912038|gb|EDR30679.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str. IP275]
 gi|165920186|gb|EDR37487.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165990554|gb|EDR42855.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166205528|gb|EDR50008.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962741|gb|EDR58762.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167051103|gb|EDR62511.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055329|gb|EDR65123.1| ribosomal protein L3 [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169749078|gb|ACA66596.1| ribosomal protein L3 [Yersinia pseudotuberculosis YPIII]
 gi|186700210|gb|ACC90839.1| ribosomal protein L3 [Yersinia pseudotuberculosis PB1/+]
 gi|229678669|gb|EEO74774.1| 50S ribosomal subunit protein L3 [Yersinia pestis Nepal516]
 gi|229690459|gb|EEO82513.1| 50S ribosomal subunit protein L3 [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229696433|gb|EEO86480.1| 50S ribosomal subunit protein L3 [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229706377|gb|EEO92384.1| 50S ribosomal subunit protein L3 [Yersinia pestis Pestoides A]
 gi|262360369|gb|ACY57090.1| 50S ribosomal protein L3 [Yersinia pestis D106004]
 gi|262364321|gb|ACY60878.1| 50S ribosomal protein L3 [Yersinia pestis D182038]
 gi|270336737|gb|EFA47514.1| 50S ribosomal protein L3 [Yersinia pestis KIM D27]
 gi|294352748|gb|ADE63089.1| 50S ribosomal protein L3 [Yersinia pestis Z176003]
 gi|320013342|gb|ADV96913.1| 50S ribosomal subunit protein L3 [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 209

 Score =  267 bits (682), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 131/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   ++L+ +GY AVQV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYRAVQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+ +  +    G   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLPEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG MG  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHMGDERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   + I V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGATGGNLI-VKPAVKA 209


>gi|283796559|ref|ZP_06345712.1| 50S ribosomal protein L3 [Clostridium sp. M62/1]
 gi|291075973|gb|EFE13337.1| 50S ribosomal protein L3 [Clostridium sp. M62/1]
 gi|295092547|emb|CBK78654.1| 50S ribosomal protein L3, bacterial [Clostridium cf.
           saccharolyticum K10]
 gi|295115275|emb|CBL36122.1| 50S ribosomal protein L3, bacterial [butyrate-producing bacterium
           SM4/1]
          Length = 211

 Score =  267 bits (682), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 89/211 (42%), Positives = 123/211 (58%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G   PVTVL    C V   +T + +GY AVQVG  + + K 
Sbjct: 1   MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTAENDGYEAVQVGFVDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKP++G F    VS K+ + EFR +   +   V        F  G  +D T ++ GKGF
Sbjct: 61  VSKPVKGHFDKAGVSYKRYVREFRFENASE-YSVKDEIKADIFAAGDKIDATAISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    PGRVFK K M G+MG  +VT++NLE+V
Sbjct: 120 QGAIKRHGQHRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGQMGHVKVTIQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +  L+LVKG VPG KK S + ++++ K
Sbjct: 179 KVDAENNLLLVKGAVPGPKK-SLVTIKETVK 208


>gi|187930364|ref|YP_001900851.1| 50S ribosomal protein L3 [Ralstonia pickettii 12J]
 gi|241664532|ref|YP_002982892.1| 50S ribosomal protein L3 [Ralstonia pickettii 12D]
 gi|226730553|sp|B2UEL9|RL3_RALPJ RecName: Full=50S ribosomal protein L3
 gi|187727254|gb|ACD28419.1| ribosomal protein L3 [Ralstonia pickettii 12J]
 gi|240866559|gb|ACS64220.1| ribosomal protein L3 [Ralstonia pickettii 12D]
          Length = 217

 Score =  267 bits (682), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 92/216 (42%), Positives = 128/216 (59%), Gaps = 2/216 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTVL + + +V   +T + +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTDDGDSIPVTVLEVGDNRVTQIKTDETDGYTAVQVTFGTRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + + EFRV          G+  S   F VGQ +DV G+TIGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEVIKEFRVDAARAAEFQPGANISVDLFEVGQKIDVQGVTIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RA+HG S SH   GS G  QDPGRVF  K+M G MG    TV+NLE+
Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             +D +R L+LVKG +PGA K   ++V  + K+   
Sbjct: 181 AKIDAERKLLLVKGAIPGA-KGGQVIVTPAVKARAK 215


>gi|255556584|ref|XP_002519326.1| 50S ribosomal protein L3, putative [Ricinus communis]
 gi|223541641|gb|EEF43190.1| 50S ribosomal protein L3, putative [Ricinus communis]
          Length = 311

 Score =  267 bits (682), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 102/209 (48%), Positives = 143/209 (68%), Gaps = 2/209 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K GMT +++  G R+P+TVL +D+  V   +T++K G  A+Q+G G  K K++
Sbjct: 65  RTGIIALKCGMTALWDKWGERVPITVLWVDDNIVTQVKTVEKEGIFALQIGYGHKKAKHL 124

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F + NV  K+KL EF V +D  L+PVG+     +F  GQ VD+TG+T GKGF 
Sbjct: 125 TKPEVGHFRAHNVPLKRKLREFPVTED-ALIPVGTSLGVRHFVPGQFVDITGITRGKGFQ 183

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F G+ ATHG S+SHRS GSTG R  PG+VFK KKM GRMGG + TVKN+ V  
Sbjct: 184 GGMKRHGFKGMPATHGASLSHRSGGSTGQRDAPGKVFKGKKMPGRMGGVQRTVKNVWVYK 243

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           +D  R ++ V+G VPGA+ N ++ ++D+ 
Sbjct: 244 IDPTRNMMWVRGQVPGAEGN-FVFIKDAV 271


>gi|126736644|ref|ZP_01752384.1| ribosomal protein L3 [Roseobacter sp. CCS2]
 gi|126713957|gb|EBA10828.1| ribosomal protein L3 [Roseobacter sp. CCS2]
          Length = 283

 Score =  267 bits (682), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 123/213 (57%), Positives = 161/213 (75%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+G++A+K+GMT ++  +G++IPVTVL L+N QVV  RT D NGY AVQ+GAG AK K 
Sbjct: 2   LRTGLIAKKVGMTRLFMEDGKQIPVTVLSLENLQVVAQRTADTNGYTAVQLGAGNAKAKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F++  V PK+K+ EFRV  + +++ VG   + +++  GQ VDV G +IGKGF
Sbjct: 62  TSKAMRGHFAAAKVEPKRKVAEFRVAPE-NMINVGETLTANHYFEGQYVDVCGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  +VT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAAKVTTQNLQVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             D  RG+I+VKG VPG+ K  W+ ++D+ K  
Sbjct: 181 KTDADRGVIMVKGAVPGS-KGGWVTIKDAVKKP 212


>gi|258513640|ref|YP_003189862.1| 50S ribosomal protein L3 [Desulfotomaculum acetoxidans DSM 771]
 gi|257777345|gb|ACV61239.1| ribosomal protein L3 [Desulfotomaculum acetoxidans DSM 771]
          Length = 209

 Score =  267 bits (682), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 131/212 (61%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++  +GR +PVTV+    C VV  +T +++GY AVQ+G GE + + 
Sbjct: 1   MPKGILGKKVGMTQIFTEDGRALPVTVIEAGPCVVVQKKTPEQDGYAAVQLGFGEKRERL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP++G F    V+P + L E RV +D D   VG       F+ G  VDV G++ GKGF
Sbjct: 61  FNKPLKGHFKKYGVTPMRYLKELRV-EDIDSYEVGQEIKADLFSKGDKVDVVGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNF      HG S  HR  GS G +  P RVFK +K+ G MG  RVTV+NLE+V
Sbjct: 120 AGGIKRHNFHRGPMAHG-SKYHRRPGSLGAKG-PARVFKGRKLPGHMGVERVTVQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R ++ VKG +PG  KN  +++  S K+
Sbjct: 178 KVDAERNILAVKGAIPG-NKNGLVMILTSKKA 208


>gi|325191529|emb|CCA25903.1| 50S ribosomal protein L32 putative [Albugo laibachii Nc14]
          Length = 280

 Score =  266 bits (681), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 102/215 (47%), Positives = 132/215 (61%), Gaps = 2/215 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K+GM  V++  G     TVL ++ CQV   +T D +G+ A+Q+G G  K +NV
Sbjct: 38  RTGLLAVKIGMISVWDYYGVAHGCTVLQVEKCQVTQVKTSDIHGFNALQLGVGLRKPRNV 97

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP+ G  +   V PK++L EFRV +D  LL  G+  +  +F  GQ VDV G + GKGF 
Sbjct: 98  VKPLMGHLNKAGVPPKRQLQEFRVSED-ALLAAGTTLTAMHFVPGQYVDVCGTSKGKGFQ 156

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MK HNF G  A+HG S +HR  GSTG  QDPGRVFK KKM GRMG  RVT  NL +V 
Sbjct: 157 GVMKLHNFAGQPASHGNSKTHRHMGSTGQCQDPGRVFKGKKMPGRMGNKRVTRDNLWIVK 216

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           +D  R L+ VKG VPG  K S + V D+ K     
Sbjct: 217 IDTVRNLLYVKGSVPG-TKGSIVRVTDARKKTPTA 250


>gi|323136086|ref|ZP_08071169.1| 50S ribosomal protein L3 [Methylocystis sp. ATCC 49242]
 gi|322399177|gb|EFY01696.1| 50S ribosomal protein L3 [Methylocystis sp. ATCC 49242]
          Length = 240

 Score =  266 bits (681), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 135/215 (62%), Positives = 159/215 (73%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  +PVTVL LD CQVV  RT +KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKVGMTRVFTEAGEHVPVTVLKLDGCQVVAQRTKEKNGYTAVQLGIGRAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK  R  F++  V PK KL EFRV  +++LLPVG+  +  +F VGQ VDVTG T GKGF
Sbjct: 61  VSKAERTRFAAAKVEPKMKLAEFRV-NEEELLPVGAEITADHFVVGQFVDVTGTTTGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR  FGGLRA+HGVSISHRSHGSTG RQDPG+ FKNKKMAG MG  RVT +NL VV
Sbjct: 120 AGPMKRWGFGGLRASHGVSISHRSHGSTGGRQDPGKTFKNKKMAGHMGVERVTTQNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D +RGL+LV+G VPG     WI VRD+ K A+ 
Sbjct: 180 QTDVERGLVLVEGAVPGTA-GGWIFVRDAVKRALP 213


>gi|153940129|ref|YP_001392834.1| 50S ribosomal protein L3 [Clostridium botulinum F str. Langeland]
 gi|168178832|ref|ZP_02613496.1| ribosomal protein L3 [Clostridium botulinum NCTC 2916]
 gi|170758623|ref|YP_001788821.1| 50S ribosomal protein L3 [Clostridium botulinum A3 str. Loch Maree]
 gi|166233134|sp|A7GJ74|RL3_CLOBL RecName: Full=50S ribosomal protein L3
 gi|226725154|sp|B1KSM5|RL3_CLOBM RecName: Full=50S ribosomal protein L3
 gi|152936025|gb|ABS41523.1| 50S ribosomal protein L3 [Clostridium botulinum F str. Langeland]
 gi|169405612|gb|ACA54023.1| 50S ribosomal protein L3 [Clostridium botulinum A3 str. Loch Maree]
 gi|182670248|gb|EDT82224.1| ribosomal protein L3 [Clostridium botulinum NCTC 2916]
 gi|295320814|gb|ADG01192.1| 50S ribosomal protein L3 [Clostridium botulinum F str. 230613]
          Length = 209

 Score =  266 bits (681), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 85/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +KLGMT ++N  G+ IPVTV+    C V+  +T++K+GY A+QV  G+ + K 
Sbjct: 1   MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP++G F+   VS K+ + EF++ +D + L +G       F  G+ VD++G++ GKGF
Sbjct: 61  RNKPVKGHFAKAGVSVKRHIKEFKL-EDSNSLEIGQEIKADVFEAGERVDISGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G ++R N      +HG S  HR+ GS G   DP R FKNK+M G MG    TV NLEVV
Sbjct: 120 QGTIRRWNAHRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  ++ LIL+KG VPG  K   + +R++ K+
Sbjct: 179 RIIPEKNLILIKGGVPGPNKG-LVQIRNTVKA 209


>gi|18146071|dbj|BAB82111.1| 50S ribosomal protein L3 [Clostridium perfringens str. 13]
          Length = 216

 Score =  266 bits (681), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 89/212 (41%), Positives = 129/212 (60%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT +++  GR IPVTV+    C VV  +T++ +GY A+QVG GE + K 
Sbjct: 8   MKKAIIGKKVGMTQIFDENGRVIPVTVVEAGPCVVVQKKTVETDGYDAIQVGFGELREKL 67

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G F+   VS ++ L EFR  +D     VG       F +G  VDV+G++ GKGF
Sbjct: 68  VNKPRKGHFAKAGVSLRRTLKEFR-MEDVANYNVGDEIKVDTFEIGDKVDVSGVSKGKGF 126

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR N      +HG S  HR+ GS G   DP R FKNK+M G MG    TV NLEVV
Sbjct: 127 QGTIKRWNASRGPMSHG-SKFHRAPGSMGAASDPSRTFKNKRMPGHMGAKNTTVLNLEVV 185

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  ++ +IL+KG +PG  K + + +R+S K+
Sbjct: 186 KIMPEKNIILIKGGIPGPNKGTVV-IRNSVKA 216


>gi|242237859|ref|YP_002986040.1| ribosomal protein L3 [Dickeya dadantii Ech703]
 gi|242129916|gb|ACS84218.1| ribosomal protein L3 [Dickeya dadantii Ech703]
          Length = 209

 Score =  266 bits (681), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 97/210 (46%), Positives = 134/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKTLENDGYRAVQVTTGAKKANRVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L EFR+ + +D   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRTLREFRLAEGEDF-AVGQNISVEIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|126176355|ref|YP_001052504.1| 50S ribosomal protein L3 [Shewanella baltica OS155]
 gi|152998749|ref|YP_001364430.1| 50S ribosomal protein L3 [Shewanella baltica OS185]
 gi|160873326|ref|YP_001552642.1| 50S ribosomal protein L3 [Shewanella baltica OS195]
 gi|217975201|ref|YP_002359952.1| 50S ribosomal protein L3 [Shewanella baltica OS223]
 gi|304412765|ref|ZP_07394367.1| 50S ribosomal protein L3 [Shewanella baltica OS183]
 gi|307307429|ref|ZP_07587164.1| 50S ribosomal protein L3 [Shewanella baltica BA175]
 gi|166234591|sp|A3DA72|RL3_SHEB5 RecName: Full=50S ribosomal protein L3
 gi|166234592|sp|A6WHS8|RL3_SHEB8 RecName: Full=50S ribosomal protein L3
 gi|189029479|sp|A9KWA2|RL3_SHEB9 RecName: Full=50S ribosomal protein L3
 gi|254803689|sp|B8EBK5|RL3_SHEB2 RecName: Full=50S ribosomal protein L3
 gi|125999560|gb|ABN63635.1| LSU ribosomal protein L3P [Shewanella baltica OS155]
 gi|151363367|gb|ABS06367.1| ribosomal protein L3 [Shewanella baltica OS185]
 gi|160858848|gb|ABX47382.1| ribosomal protein L3 [Shewanella baltica OS195]
 gi|217500336|gb|ACK48529.1| ribosomal protein L3 [Shewanella baltica OS223]
 gi|304348845|gb|EFM13261.1| 50S ribosomal protein L3 [Shewanella baltica OS183]
 gi|306910217|gb|EFN40650.1| 50S ribosomal protein L3 [Shewanella baltica BA175]
 gi|315265553|gb|ADT92406.1| 50S ribosomal protein L3 [Shewanella baltica OS678]
          Length = 212

 Score =  266 bits (681), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 93/213 (43%), Positives = 129/213 (60%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  IPVTV+ +   +V   +TL+ +GY A+QV  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFTEDGVSIPVTVIEVAGNRVTQVKTLETDGYRALQVTTGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFR-VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++KP  G F+   V   + L+E R V  + + + VG+  +   F     VDVTG + GKG
Sbjct: 61  ITKPEAGHFAKSGVEAGRGLWEMRLVDGEGEGIEVGAELNVDIFADVAKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF     THG S+SHRS+GS G  Q PGRVFK KKM+G MG  RVT +NL V
Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLVV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LV+G VPGA     I ++ + K+
Sbjct: 181 VRVDVERNLLLVRGAVPGATNGDLI-IKPAVKA 212


>gi|17547738|ref|NP_521140.1| 50S ribosomal protein L3 [Ralstonia solanacearum GMI1000]
 gi|42559667|sp|Q8XV12|RL3_RALSO RecName: Full=50S ribosomal protein L3
 gi|17430043|emb|CAD16728.1| probable 50s ribosomal protein l3 [Ralstonia solanacearum GMI1000]
          Length = 220

 Score =  266 bits (681), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 91/213 (42%), Positives = 128/213 (60%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V+  +G  IPVTVL +   +V   +T + +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGTRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + + EFR+       L +G       F+V Q +DV G TIGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEIIVEFRIDATKAAELKLGDTIDVDLFSVDQKIDVQGTTIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR++F   RA+HG S SH   GS G  QDPGRVF  K+M G MG    TV+NL +
Sbjct: 121 YAGTIKRYHFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V +D +R L+LVKG VPGA K+ +++V  + K+
Sbjct: 181 VRIDAERKLLLVKGAVPGA-KSGFVVVSPAVKA 212


>gi|110802837|ref|YP_699663.1| 50S ribosomal protein L3 [Clostridium perfringens SM101]
 gi|123341525|sp|Q0SQE4|RL3_CLOPS RecName: Full=50S ribosomal protein L3
 gi|110683338|gb|ABG86708.1| 50S ribosomal protein L3 [Clostridium perfringens SM101]
          Length = 209

 Score =  266 bits (681), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 90/212 (42%), Positives = 129/212 (60%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT +++  GR IPVTV+    C VV  +T++ +GY A+QVG GE + K 
Sbjct: 1   MKKAIIGKKVGMTQIFDENGRVIPVTVVEAGPCVVVQKKTVETDGYDAIQVGFGELREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP RG F+   VS ++ L EFR  +D     VG       F +G  VDV+G++ GKGF
Sbjct: 61  VNKPRRGHFAKAGVSLRRTLKEFR-MEDVANYNVGDEIKVDTFEIGDKVDVSGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR N      +HG S  HR+ GS G   DP R FKNK+M G MG    TV NLEVV
Sbjct: 120 QGTIKRWNASRGPMSHG-SKFHRAPGSMGAASDPSRTFKNKRMPGHMGAKNTTVLNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  ++ +IL+KG +PG  K + + +R+S K+
Sbjct: 179 KIMPEKNIILIKGGIPGPNKGTIV-IRNSVKA 209


>gi|86357305|ref|YP_469197.1| 50S ribosomal protein L3 [Rhizobium etli CFN 42]
 gi|109893545|sp|Q2K9L6|RL3_RHIEC RecName: Full=50S ribosomal protein L3
 gi|86281407|gb|ABC90470.1| 50S ribosomal protein L3 [Rhizobium etli CFN 42]
          Length = 213

 Score =  266 bits (681), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 147/215 (68%), Positives = 172/215 (80%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  +PVTVL +D CQVV  RT++KNGY AVQ+GAG+AKVKN
Sbjct: 1   MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMDGCQVVATRTVEKNGYTAVQLGAGQAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+  NV PK KL EFRV +D +LL +G+     +F  GQLVDVTG TIGKGF
Sbjct: 61  TSKAMRGNFAVANVEPKAKLAEFRVSED-NLLEIGTELKADHFAAGQLVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           S D+ RGLIL+KG VPG+ K +WI+VRD+ KSA  
Sbjct: 180 STDEDRGLILIKGAVPGS-KGAWIIVRDAVKSAAK 213


>gi|168181864|ref|ZP_02616528.1| 50S ribosomal protein L3 [Clostridium botulinum Bf]
 gi|237796942|ref|YP_002864494.1| 50S ribosomal protein L3 [Clostridium botulinum Ba4 str. 657]
 gi|259647405|sp|C3KVQ1|RL3_CLOB6 RecName: Full=50S ribosomal protein L3
 gi|182674831|gb|EDT86792.1| 50S ribosomal protein L3 [Clostridium botulinum Bf]
 gi|229262333|gb|ACQ53366.1| 50S ribosomal protein L3 [Clostridium botulinum Ba4 str. 657]
          Length = 209

 Score =  266 bits (681), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 86/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +KLGMT ++N  G+ IPVTV+    C V+  +T++K+GY A+QV  G+ + K 
Sbjct: 1   MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP++G F+   VS K+ + EF++ +D + L +G       F  G+ VD++G++ GKGF
Sbjct: 61  RNKPVKGHFAKAGVSVKRHIKEFKL-EDSNSLEIGQEIKADVFEAGERVDISGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G ++R N      THG S  HR+ GS G   DP R FKNK+M G MG    TV NLEVV
Sbjct: 120 QGTIRRWNAHRGPMTHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  ++ LIL+KG VPG  K   + +R++ K+
Sbjct: 179 RIIPEKNLILIKGGVPGPNKG-LVQIRNTVKA 209


>gi|226950933|ref|YP_002806024.1| ribosomal protein L3 [Clostridium botulinum A2 str. Kyoto]
 gi|254803664|sp|C1FMV1|RL3_CLOBJ RecName: Full=50S ribosomal protein L3
 gi|226840834|gb|ACO83500.1| ribosomal protein L3 [Clostridium botulinum A2 str. Kyoto]
          Length = 209

 Score =  266 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 85/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +KLGMT ++N  G+ IPVTV+    C V+  +T++K+GY A+QV  G+ + K 
Sbjct: 1   MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP++G F+   VS K+ + EF++ +D + L +G       F  G+ VD++G++ GKGF
Sbjct: 61  RNKPVKGHFAKAGVSVKRHIKEFKL-EDLNSLEIGQEIKADVFEAGERVDISGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G ++R N      +HG S  HR+ GS G   DP R FKNK+M G MG    TV NLEVV
Sbjct: 120 QGTIRRWNAHRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  ++ LIL+KG VPG  K   + +R++ K+
Sbjct: 179 RIIPEKNLILIKGGVPGPNKG-LVQIRNTVKA 209


>gi|220921899|ref|YP_002497200.1| 50S ribosomal protein L3 [Methylobacterium nodulans ORS 2060]
 gi|254803681|sp|B8IS85|RL3_METNO RecName: Full=50S ribosomal protein L3
 gi|219946505|gb|ACL56897.1| ribosomal protein L3 [Methylobacterium nodulans ORS 2060]
          Length = 251

 Score =  266 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 133/220 (60%), Positives = 163/220 (74%), Gaps = 2/220 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  +PVTVL +D CQVV HRT++KNGY+A+QVG G+AKVKN
Sbjct: 1   MRSGVIAQKVGMTRVFTDAGEHVPVTVLKVDQCQVVAHRTVEKNGYVALQVGVGKAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK  RG F+   V PK+KL EFRV +D  L+PVG+  +  +F  GQ VDVTG+T GKGF
Sbjct: 61  VSKAERGRFAIAKVEPKRKLAEFRVSED-ALIPVGAEITADHFIPGQFVDVTGITTGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRA+HGVSISHRS GSTG RQDPG+ FKNKKM G +G  RVT +NL VV
Sbjct: 120 AGGMKRWNFGGLRASHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
             D +RGLILV+G VPG     WI VRD+ K  +  +  +
Sbjct: 180 RTDPERGLILVEGAVPGVA-GGWIHVRDAVKRKLPAEAPM 218


>gi|255263954|ref|ZP_05343296.1| 50S ribosomal protein L3 [Thalassiobium sp. R2A62]
 gi|255106289|gb|EET48963.1| 50S ribosomal protein L3 [Thalassiobium sp. R2A62]
          Length = 292

 Score =  266 bits (680), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 125/215 (58%), Positives = 163/215 (75%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSG++A+K+GMT ++  +G++IPVTVL LD  QVV  RT + +GY AVQ+GAG AKVK 
Sbjct: 2   LRSGIIAKKVGMTRIFQEDGKQIPVTVLQLDKLQVVAQRTQETDGYTAVQLGAGTAKVKR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS+ MRG F++  V PK+++ EFRV   ++L+ VG   + +++  GQ VDV+G +IGKGF
Sbjct: 62  VSQAMRGHFAAAKVEPKRRVAEFRV-AAENLINVGEEITANHYFEGQFVDVSGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GAMKRHNFGGLRATHGVSISHRSHGSTG  QDPG+VFK KKMAG MG  +VT +NL+VV
Sbjct: 121 QGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAAKVTTQNLQVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D  RGLI+VKG VPG+ K  W+ V+D+ K  + 
Sbjct: 181 KTDAGRGLIMVKGAVPGS-KGGWVTVKDAVKKPIP 214


>gi|49474404|ref|YP_032446.1| 50S ribosomal protein L3 [Bartonella quintana str. Toulouse]
 gi|81827601|sp|Q6FZC2|RL3_BARQU RecName: Full=50S ribosomal protein L3
 gi|49239908|emb|CAF26306.1| 50s ribosomal protein l3 [Bartonella quintana str. Toulouse]
          Length = 246

 Score =  266 bits (680), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 133/215 (61%), Positives = 165/215 (76%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT VYN  G  +PVTVL L+NCQV+  RT++KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRVYNDAGEHVPVTVLRLENCQVIAQRTIEKNGYTAVQLGVGFAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ +RG F+ V+V PK K+ EFRV  D +LL +G+  +  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSRALRGHFAKVSVEPKAKIAEFRVSPD-NLLDIGTEITAQHFVPGQRVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HR+HGSTG  QDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNIEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           S D +RGLILV+G V G+ K +WILVRD+ K  + 
Sbjct: 180 STDVERGLILVRGAVSGS-KGAWILVRDAVKRPLP 213


>gi|242052463|ref|XP_002455377.1| hypothetical protein SORBIDRAFT_03g009550 [Sorghum bicolor]
 gi|241927352|gb|EES00497.1| hypothetical protein SORBIDRAFT_03g009550 [Sorghum bicolor]
          Length = 318

 Score =  266 bits (680), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 103/209 (49%), Positives = 144/209 (68%), Gaps = 2/209 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GV+  K GM+ +++  G ++P+TVL +D+  V   +T +K G+ A+Q+GAG+ K K++
Sbjct: 71  RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVTQVKTAEKEGFFALQLGAGQKKEKHL 130

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F +  V  K+KL EF V +D  LLPVG+  +  +F  GQ VDVTG+T GKGF+
Sbjct: 131 TKPEVGHFRAQGVPLKRKLREFPVTED-ALLPVGTTITVRHFLPGQFVDVTGITKGKGFA 189

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MK+H F G  A+HG S+SHRS GSTG R  PGRVFKN+KM GRMGG + TVKN+ V  
Sbjct: 190 GVMKKHGFSGGPASHGASLSHRSGGSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 249

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           +D  R L+ +KG VPG +  S++ V+DS 
Sbjct: 250 IDPARNLLYLKGQVPGPQ-GSFVFVKDSI 277


>gi|160881785|ref|YP_001560753.1| ribosomal protein L3 [Clostridium phytofermentans ISDg]
 gi|189042839|sp|A9KJJ4|RL3_CLOPH RecName: Full=50S ribosomal protein L3
 gi|160430451|gb|ABX44014.1| ribosomal protein L3 [Clostridium phytofermentans ISDg]
          Length = 211

 Score =  266 bits (680), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 96/213 (45%), Positives = 126/213 (59%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N  G   PVTVL    C V   +T+D +GY AVQVG G+ +   
Sbjct: 1   MKKAILATKIGMTQIFNENGVLTPVTVLQAGPCAVTQVKTVDNDGYAAVQVGFGDIRETL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G F+   V+ K+ L EFR +   D   VG       FT G  +D TG + GKGF
Sbjct: 61  VNKPQKGHFAKAGVANKRFLKEFRFENAAD-YTVGQEIKVDIFTAGDKIDATGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    PGRVFK K M G+MG  +VTV+NLEVV
Sbjct: 120 QGAIKRHGLSRGPMGHG-SKFHRHAGSNGAATTPGRVFKGKHMPGQMGNVKVTVQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +D    LILVKG VPG KK + I+++++ KS 
Sbjct: 179 KIDVDNNLILVKGAVPGPKK-AMIMLKETVKSG 210


>gi|326490890|dbj|BAJ90112.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 313

 Score =  266 bits (680), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 105/209 (50%), Positives = 144/209 (68%), Gaps = 2/209 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GV+  K GM+ +++  G ++P+TVL +D+  V   +T +K G+ A+Q+GAG+ K K++
Sbjct: 66  RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVCQVKTAEKEGFYALQLGAGQKKEKHL 125

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F S  V  K+KL EF V +D  LLPVG+  S  +F  GQ VDV G+T GKGF+
Sbjct: 126 TKPEVGHFRSQGVPLKRKLKEFPVTED-ALLPVGTTISVRHFVPGQFVDVIGITKGKGFA 184

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F G+ A+HG S+SHRS GSTG R  PGRVFKN+KM GRMGG + TVKN+ V  
Sbjct: 185 GGMKRHGFSGMPASHGASLSHRSIGSTGQRDSPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 244

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           +D  R L+ +KG VPG +  S++ V+DS 
Sbjct: 245 IDPARNLLYLKGQVPGPQ-GSFLFVKDSI 272


>gi|268609593|ref|ZP_06143320.1| 50S ribosomal protein L3 [Ruminococcus flavefaciens FD-1]
          Length = 210

 Score =  266 bits (680), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 90/212 (42%), Positives = 135/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +K+GMT +++  G+ +PVTV+    C VV  +T++ +GY A+Q+G G+ KV+ 
Sbjct: 1   MQKGIIGKKIGMTQIFDEAGKVVPVTVVEAGPCVVVQKKTVENDGYAALQLGYGDVKVQR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KPM+G F   +V+ KK L EFR+ +D D L VG +     F VG  +DV G + GKG+
Sbjct: 61  MNKPMKGHFDKADVACKKTLKEFRL-EDCDALNVGDIVKADTFAVGDAIDVVGTSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHN   L+ THG    HR  GS G    P R++K K MAG MG  +VTV+NLE+V
Sbjct: 120 AGPIKRHNQHRLKETHGTGPVHRQAGSMGACSSPSRIYKGKGMAGHMGAEQVTVQNLEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +D +  LI +KG +PG  K   + + DS K+
Sbjct: 180 KIDVENNLIAIKGAIPGP-KGGIVYIVDSVKA 210


>gi|148260939|ref|YP_001235066.1| 50S ribosomal protein L3 [Acidiphilium cryptum JF-5]
 gi|212288245|sp|A5FZW5|RL3_ACICJ RecName: Full=50S ribosomal protein L3
 gi|146402620|gb|ABQ31147.1| LSU ribosomal protein L3P [Acidiphilium cryptum JF-5]
          Length = 227

 Score =  266 bits (680), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 124/218 (56%), Positives = 164/218 (75%), Gaps = 2/218 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+KLGMT ++  +G  +PVTVLH+D+ +VV  RT +++GY AVQ+G G AK KN
Sbjct: 4   MRTGIIAKKLGMTRLFREDGTHVPVTVLHMDDVRVVAARTKERDGYAAVQLGFGHAKTKN 63

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+G F++  V P  +L EFRV  DD +L  G V S ++FTVGQ VDV G++ GKGF
Sbjct: 64  VTKPMKGHFAAAKVEPANRLVEFRV-ADDAVLEAGQVLSAAHFTVGQKVDVAGISKGKGF 122

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NF GL A+HGVSISHRS GSTG RQDPG+ FKNKKMAG +GG R+T  NLEV 
Sbjct: 123 AGGMKRWNFRGLEASHGVSISHRSLGSTGNRQDPGKTFKNKKMAGHLGGERITTLNLEVA 182

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           ++D+ R LI++KG VPGA K+ ++LVRD+ K+A     
Sbjct: 183 AIDEARNLIMIKGAVPGA-KDGYVLVRDAVKTARPADA 219


>gi|120596989|ref|YP_961563.1| 50S ribosomal protein L3 [Shewanella sp. W3-18-1]
 gi|146294841|ref|YP_001185265.1| 50S ribosomal protein L3 [Shewanella putrefaciens CN-32]
 gi|166234594|sp|A4YBY3|RL3_SHEPC RecName: Full=50S ribosomal protein L3
 gi|166234596|sp|A1REB4|RL3_SHESW RecName: Full=50S ribosomal protein L3
 gi|120557082|gb|ABM23009.1| LSU ribosomal protein L3P [Shewanella sp. W3-18-1]
 gi|145566531|gb|ABP77466.1| LSU ribosomal protein L3P [Shewanella putrefaciens CN-32]
 gi|319424580|gb|ADV52654.1| 50S ribosomal protein L3 [Shewanella putrefaciens 200]
          Length = 212

 Score =  266 bits (680), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 92/213 (43%), Positives = 130/213 (61%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  IPVTV+ +   +V   +TL+ +GY A+QV  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFTEDGVSIPVTVIEVAGNRVTQVKTLETDGYRALQVTTGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++KP  G F+   V   + L+E R++  + + + VG+  +   F     VDVTG + GKG
Sbjct: 61  ITKPEAGHFAKSGVEAGRGLWEVRLEDGEGEGIEVGAELNVDIFADVAKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF     THG S+SHRS+GS G  Q PGRVFK KKM+G MG  RVT +NL V
Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLVV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LV+G VPGA     I ++ + K+
Sbjct: 181 VRVDVERNLLLVRGAVPGATNGDLI-IKPAVKA 212


>gi|126666813|ref|ZP_01737790.1| Ribosomal protein L3 [Marinobacter sp. ELB17]
 gi|126628858|gb|EAZ99478.1| Ribosomal protein L3 [Marinobacter sp. ELB17]
          Length = 212

 Score =  266 bits (680), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 91/213 (42%), Positives = 133/213 (62%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++  +G+ +PVTV+ +D+ ++   +TL+ +GY AVQ+  G  +   
Sbjct: 1   MAIGIVGRKAGMTRIFTEDGQALPVTVIEVDSNRITQLKTLENDGYRAVQITVGSRRSSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + ++EFR+   + + L  G   + S F  GQ VD TG + GKG
Sbjct: 61  VNKSAAGHFAKAGVEAGRSVWEFRLADGEGEDLVAGGEITASVFEDGQAVDATGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG+MG  +VTV+NL++
Sbjct: 121 FQGGVKRWNFAMQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQMGNAQVTVQNLKI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LV G VPGA     + ++ + K+
Sbjct: 181 VRVDAERNLLLVSGAVPGATGGDVV-IKPAVKA 212


>gi|50122951|ref|YP_052118.1| 50S ribosomal protein L3 [Pectobacterium atrosepticum SCRI1043]
 gi|81826993|sp|Q6CZX0|RL3_ERWCT RecName: Full=50S ribosomal protein L3
 gi|49613477|emb|CAG76928.1| 50S ribosomal subunit protein L3 [Pectobacterium atrosepticum
           SCRI1043]
          Length = 209

 Score =  265 bits (679), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 96/210 (45%), Positives = 134/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV AG  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTAGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L EFR+ + ++   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRTLREFRLSEGEEFT-VGQSISVEIFADIKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|13470551|ref|NP_102120.1| 50S ribosomal protein L3 [Mesorhizobium loti MAFF303099]
 gi|42559683|sp|Q98N57|RL3_RHILO RecName: Full=50S ribosomal protein L3
 gi|14021293|dbj|BAB47906.1| 50S ribosomal protein L3 [Mesorhizobium loti MAFF303099]
          Length = 237

 Score =  265 bits (679), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 131/219 (59%), Positives = 164/219 (74%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT +YN  G  +PVTVL ++NCQVV  RT +KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAKKVGMTRIYNDAGEHVPVTVLQMENCQVVAQRTQEKNGYTAVQLGVGLAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F++ +V PK K+ EFRV  D +++ VG+  +  +F  GQ VDVTG TIGKGF
Sbjct: 61  TSKAMRGHFATASVEPKAKVAEFRVSAD-NMIDVGAEITVEHFVAGQKVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH+ GG RATHG S+SHR+HGSTG RQDPG+VFK KKMAG MG  RVT +N+E+V
Sbjct: 120 QGVIKRHHMGGGRATHGNSVSHRTHGSTGQRQDPGKVFKGKKMAGHMGDTRVTTQNVEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           S D  RGLIL++G VPG+ K +WILVRD+ K A+     
Sbjct: 180 STDADRGLILIRGAVPGS-KGAWILVRDAAKVALPANAP 217


>gi|15965109|ref|NP_385462.1| 50S ribosomal protein L3 [Sinorhizobium meliloti 1021]
 gi|307314359|ref|ZP_07593965.1| 50S ribosomal protein L3 [Sinorhizobium meliloti BL225C]
 gi|307322071|ref|ZP_07601447.1| 50S ribosomal protein L3 [Sinorhizobium meliloti AK83]
 gi|42559675|sp|Q92QH0|RL3_RHIME RecName: Full=50S ribosomal protein L3
 gi|15074289|emb|CAC45935.1| Probable 50S ribosomal protein L3 [Sinorhizobium meliloti 1021]
 gi|306892253|gb|EFN23063.1| 50S ribosomal protein L3 [Sinorhizobium meliloti AK83]
 gi|306899057|gb|EFN29699.1| 50S ribosomal protein L3 [Sinorhizobium meliloti BL225C]
          Length = 228

 Score =  265 bits (679), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 144/213 (67%), Positives = 170/213 (79%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  IPVTVL L+NCQVV HRT +KNGY AVQ+GAG +KVKN
Sbjct: 1   MRSGVIAQKVGMTRVYNDAGEHIPVTVLRLENCQVVSHRTEEKNGYTAVQLGAGRSKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
             K MRG F++ +V PK KL EFRV  D +L+ +G+  +  +F  GQLVDVTG TIGKGF
Sbjct: 61  TPKAMRGHFAAASVEPKAKLVEFRVSAD-NLIDIGAELTAGHFVAGQLVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GA+KRHNFGGLRATHGVS+SHRSHGSTG  QDPGRV+K K+MAG MG  RVT +NLEVV
Sbjct: 120 AGAIKRHNFGGLRATHGVSVSHRSHGSTGSNQDPGRVWKGKRMAGHMGQTRVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           S D+ RGLILVKG VPG+ K SWI+VRD+ KS 
Sbjct: 180 STDEDRGLILVKGAVPGS-KGSWIVVRDAIKSG 211


>gi|237786395|ref|YP_002907100.1| 50S ribosomal protein L3 [Corynebacterium kroppenstedtii DSM 44385]
 gi|259647406|sp|C4LL52|RL3_CORK4 RecName: Full=50S ribosomal protein L3
 gi|237759307|gb|ACR18557.1| 50S ribosomal protein L3 [Corynebacterium kroppenstedtii DSM 44385]
          Length = 219

 Score =  265 bits (679), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 87/214 (40%), Positives = 122/214 (57%), Gaps = 1/214 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++ + R +PVTV+    C V   RT +K+GY A+Q+  G+   + V+
Sbjct: 7   KGILGTKLGMTQVFDEDNRVVPVTVVEAGPCVVTQIRTEEKDGYSAIQIAYGDIDPRKVN 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V+P++ + E R+        VG   +   F   + VDVTG T G GF+G
Sbjct: 67  KPQSGHFAKAGVTPRRYVTEIRMDDVLSDYEVGQDVTVELFGDVKFVDVTGTTRGHGFAG 126

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRH F G  A HG   +HR  G  G    PGRVFK  +MAGRMG NRVT +NL++  V
Sbjct: 127 AMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGNNRVTTQNLKLFKV 186

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           D    L+L+KG VPG  +   + V+ + K   + 
Sbjct: 187 DADSNLLLIKGAVPG-IRGGLVTVKTAVKGGAHA 219


>gi|271502246|ref|YP_003335272.1| 50S ribosomal protein L3 [Dickeya dadantii Ech586]
 gi|270345801|gb|ACZ78566.1| 50S ribosomal protein L3 [Dickeya dadantii Ech586]
          Length = 209

 Score =  265 bits (679), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 98/210 (46%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  EG  IPVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEEGVSIPVTVIEIEANRVTQVKTLENDGYRAVQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L EFR+  D +   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRVLREFRL-ADSEEFAVGQDISVEVFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|269128516|ref|YP_003301886.1| 50S ribosomal protein L3 [Thermomonospora curvata DSM 43183]
 gi|268313474|gb|ACY99848.1| ribosomal protein L3 [Thermomonospora curvata DSM 43183]
          Length = 216

 Score =  265 bits (679), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 101/212 (47%), Positives = 131/212 (61%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R GV+  KLGMT V++ EGR +PVTV+    C V   RT +K+GY AVQ+G G+   + V
Sbjct: 5   RKGVLGEKLGMTQVFDDEGRIVPVTVVQAGPCVVTQIRTPEKDGYSAVQIGYGQVNPRKV 64

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F+   V+P++ L E R   D     +G   +   F  G+ VDVTG T GKG +
Sbjct: 65  NKPRMGHFAKAGVTPRRYLTEVRTD-DASEYTLGQEITVEIFKAGEKVDVTGTTKGKGTA 123

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH FGGL A+HG    HRS GS G    PGRVFK  +MAGRMG  R TV+NL + +
Sbjct: 124 GVMKRHGFGGLGASHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNVRKTVQNLTIHA 183

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           VD  +GL+L+KG +PG      +LVRD+ K A
Sbjct: 184 VDPDKGLLLIKGAIPGPN-GGLVLVRDAVKGA 214


>gi|310659502|ref|YP_003937223.1| 50S ribosomal protein L3 [Clostridium sticklandii DSM 519]
 gi|308826280|emb|CBH22318.1| 50S ribosomal subunit protein L3 [Clostridium sticklandii]
          Length = 208

 Score =  265 bits (679), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 94/210 (44%), Positives = 123/210 (58%), Gaps = 3/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
             V+ RKLGMT V+  +GR +PVTV+      V   +  + +GY AVQV  GE K K V+
Sbjct: 2   KAVLGRKLGMTQVFAEDGRLVPVTVIEAGPMVVTQIKNKETDGYEAVQVAFGEVKEKRVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+RG F+   V  KK + EF+V +D     +        F  G+ VD  G + GKGF G
Sbjct: 62  KPLRGHFAKAGVGFKKFVREFKV-EDLSAYSLAQEIKVDVFEAGEKVDAIGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHN      THG S  HR  GS G   DP RVFK KK+AG MG  RVT++NLEVV V
Sbjct: 121 PIKRHNQSRGPMTHG-SRYHRGPGSMGAASDPSRVFKGKKLAGHMGAERVTIQNLEVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D ++ LIL+KG VPG KK   ++++ + K 
Sbjct: 180 DVEKNLILIKGAVPGPKKG-LVVIKKAIKG 208


>gi|253991688|ref|YP_003043044.1| 50S ribosomal protein L3 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253783138|emb|CAQ86303.1| 50s ribosomal protein l3 [Photorhabdus asymbiotica]
          Length = 209

 Score =  265 bits (679), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 94/210 (44%), Positives = 134/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++N +V   + L+ +GY A+QV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKDLNNDGYRAIQVTTGSKKASRVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L EFR+ + ++   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRILREFRLSEGEE-YAVGQSISVEIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    A+HG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDASHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSNLIVKPAVKA 209


>gi|311693271|gb|ADP96144.1| 50S ribosomal protein L3 [marine bacterium HP15]
          Length = 212

 Score =  265 bits (679), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 91/213 (42%), Positives = 132/213 (61%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  +G+ +PVTV+ ++  ++   +TL+ +GY AVQV  G  +   
Sbjct: 1   MAIGVVGRKAGMTRIFTEDGQALPVTVIEVEPNRITQLKTLESDGYRAVQVTVGTRRSSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + ++EFR+   + + L  G   + S F  GQ+VD  G + GKG
Sbjct: 61  VTKSEAGHFAKAGVEAGRGMWEFRLADGEGEDLAAGGEITASVFEDGQVVDAIGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG+MG  +VTV+NL++
Sbjct: 121 FQGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQMGNAQVTVQNLKI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LV G VPGA     + ++ + K+
Sbjct: 181 VRVDAERNLLLVSGAVPGATGGDVV-IKPAVKA 212


>gi|28212175|ref|NP_783119.1| 50S ribosomal protein L3 [Clostridium tetani E88]
 gi|42559625|sp|Q890N9|RL3_CLOTE RecName: Full=50S ribosomal protein L3
 gi|28204619|gb|AAO37056.1| LSU ribosomal protein L3P [Clostridium tetani E88]
          Length = 209

 Score =  265 bits (679), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 86/212 (40%), Positives = 127/212 (59%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ RKLGMT +++   R +PVTV+    C VV  ++++K+GY A+QVG GE + K 
Sbjct: 1   MKKAIIGRKLGMTQIFDENNRVVPVTVVEAGPCTVVQKKSVEKDGYEAIQVGYGEIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F    V   + L EF+++       VG       F  G+ +DVTG + GKG+
Sbjct: 61  VNKPLKGHFEKAGVGLSRMLREFKLEN-VSEYQVGQEIKVDIFEAGEKIDVTGTSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR N      +HG S  HR+ GS G    P R FKNK+MAG MG  + TV NLEVV
Sbjct: 120 QGIIKRWNAHRGPMSHG-SKFHRAVGSMGAASYPARTFKNKRMAGHMGNVKSTVLNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
               ++ LIL+KG +PG  K  ++++R+S K+
Sbjct: 179 KTIPEKNLILIKGGIPGPNKG-YVIIRNSIKA 209


>gi|150396207|ref|YP_001326674.1| 50S ribosomal protein L3 [Sinorhizobium medicae WSM419]
 gi|166234597|sp|A6U859|RL3_SINMW RecName: Full=50S ribosomal protein L3
 gi|150027722|gb|ABR59839.1| ribosomal protein L3 [Sinorhizobium medicae WSM419]
          Length = 228

 Score =  265 bits (679), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 144/213 (67%), Positives = 169/213 (79%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  IPVTVL L+NCQVV  RT +KNGY AVQ+GAG +KVKN
Sbjct: 1   MRSGVIAQKVGMTRVYNDAGEHIPVTVLRLENCQVVAQRTEEKNGYTAVQLGAGRSKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
             K MRG F++ +V PK KL EFRV  D +L+ +GS  +  +F  GQLVDVTG TIGKGF
Sbjct: 61  TPKAMRGHFAAASVEPKAKLVEFRVSAD-NLIDIGSELTAGHFVAGQLVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GA+KRHNFGGLRATHGVS+SHRSHGSTG  QDPGRV+K K+MAG MG  RVT +NLEVV
Sbjct: 120 AGAIKRHNFGGLRATHGVSVSHRSHGSTGSNQDPGRVWKGKRMAGHMGQTRVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           S D+ RGLILVKG VPG+ K SWI+VRD+ KS 
Sbjct: 180 STDEDRGLILVKGAVPGS-KGSWIVVRDAIKSG 211


>gi|121601833|ref|YP_988997.1| 50S ribosomal protein L3 [Bartonella bacilliformis KC583]
 gi|121602668|ref|YP_988967.1| 50S ribosomal protein L3 [Bartonella bacilliformis KC583]
 gi|212288247|sp|A1USL4|RL3_BARBK RecName: Full=50S ribosomal protein L3
 gi|120614010|gb|ABM44611.1| ribosomal protein L3 [Bartonella bacilliformis KC583]
 gi|120614845|gb|ABM45446.1| ribosomal protein L3 [Bartonella bacilliformis KC583]
          Length = 246

 Score =  265 bits (679), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 130/219 (59%), Positives = 161/219 (73%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+ +KLGMT +YN  G R+PVTVL L+NCQV+  RT++KNGY AVQ+G G AK + 
Sbjct: 1   MRSGVITQKLGMTSIYNDTGERVPVTVLRLENCQVIAQRTVEKNGYTAVQLGVGLAKFEK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK +RG FS   V PK K+ EFRV  D +LL VG+  +  +F  GQ VDVTG +IGKGF
Sbjct: 61  TSKALRGHFSKALVEPKAKIVEFRVSSD-NLLDVGTEITVEHFVPGQRVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HR+HGSTG  QDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNVEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           S+D  RGLILV+G V G+ K +W+LVRD+ K  +     
Sbjct: 180 SIDVDRGLILVRGAVSGS-KGAWVLVRDAVKKRLPDNAP 217


>gi|319408765|emb|CBI82422.1| 50S ribosomal protein L3 [Bartonella schoenbuchensis R1]
          Length = 246

 Score =  265 bits (679), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 133/215 (61%), Positives = 163/215 (75%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT +YN  G  +PVTVL L+NCQV+  RT++KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRIYNEAGEHVPVTVLRLENCQVIAQRTVEKNGYTAVQLGVGFAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS+ +RG F+   V PK K+ EFRV  D +LL VG+  +  +F  GQ VDVTG +IGKGF
Sbjct: 61  VSRALRGHFAKAVVEPKAKVAEFRVSPD-NLLDVGTEITVEHFIPGQRVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HR+HGSTG  QDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNIEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           S D  RGLILV+G V G+ K +WILVRD+ K  + 
Sbjct: 180 STDIDRGLILVRGAVSGS-KGAWILVRDAVKKRLP 213


>gi|240167703|ref|ZP_04746362.1| 50S ribosomal protein L3 [Mycobacterium kansasii ATCC 12478]
          Length = 217

 Score =  265 bits (679), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 91/214 (42%), Positives = 125/214 (58%), Gaps = 3/214 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   R +PVTV+      V   RT +++GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP+ G +++  V+P++ L E R+   D      VG   +   F  G  VDVTG + GKG
Sbjct: 63  TKPLTGQYTAAGVNPRRHLAELRLDDPDAVAEYEVGQELTAEIFADGSYVDVTGTSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKRH F G  A HG    HR  GS G    P RVFK  +MAGRMG +RVTV+NL V
Sbjct: 123 FAGTMKRHGFRGQGAAHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             VD + G++L+KG VPG +    ++VR + K  
Sbjct: 183 HKVDAENGVLLIKGAVPG-RTGGLVMVRSAIKRG 215


>gi|254517470|ref|ZP_05129526.1| ribosomal protein L3 [Clostridium sp. 7_2_43FAA]
 gi|226911219|gb|EEH96420.1| ribosomal protein L3 [Clostridium sp. 7_2_43FAA]
          Length = 209

 Score =  265 bits (679), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 89/212 (41%), Positives = 130/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT +++  G+ +PVTV+    C VV  +T++K+GY A+QVG G+ + K 
Sbjct: 1   MKKAILGKKIGMTQIFDANGKVVPVTVVEAGPCVVVQKKTIEKDGYEAIQVGFGDVREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G ++   VS K+KL EFR+ +D     VG       F  G  +DV+G++ GKGF
Sbjct: 61  VNKPKKGHYAKAGVSLKRKLKEFRL-EDCSAYEVGQEIKADLFEAGDKIDVSGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR N      THG S  HR+ GS G   DP R FKNK M G MG    TV NLEVV
Sbjct: 120 QGVIKRWNANRGPMTHG-SKFHRAVGSMGASSDPSRTFKNKNMPGHMGAVNTTVLNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ LIL+KG +PG  K + + +R++ K+
Sbjct: 179 KVIAEKNLILIKGGIPGPNKGTVV-IRNAVKA 209


>gi|322807806|emb|CBZ05381.1| LSU ribosomal protein L3p (L3e) [Clostridium botulinum H04402 065]
          Length = 209

 Score =  265 bits (679), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 85/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +KLGMT ++N  G+ IPVTV+    C V+  +T++K+GY A+QV  G+ + K 
Sbjct: 1   MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP++G F+   VS K+ + EF++ +D + L +G       F  G+ VD++G++ GKGF
Sbjct: 61  RNKPVKGHFAKAGVSVKRHIKEFKL-EDSNSLKIGQEIKADIFEAGERVDISGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G ++R N      +HG S  HR+ GS G   DP R FKNK+M G MG    TV NLEVV
Sbjct: 120 QGTIRRWNAHRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  ++ LIL+KG VPG  K   + +R++ K+
Sbjct: 179 RIIPEKNLILIKGGVPGPNKG-LVQIRNTVKA 209


>gi|330993846|ref|ZP_08317778.1| 50S ribosomal protein L3 [Gluconacetobacter sp. SXCC-1]
 gi|329759114|gb|EGG75626.1| 50S ribosomal protein L3 [Gluconacetobacter sp. SXCC-1]
          Length = 223

 Score =  265 bits (679), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 128/215 (59%), Positives = 162/215 (75%), Gaps = 2/215 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++A+KLGMT ++  +G  +PVTVL +D+ QVV  RT +++GY AVQ+GAG+AKVKNVSKP
Sbjct: 1   MIAKKLGMTRLFKEDGTHVPVTVLQVDDLQVVDVRTTERDGYTAVQLGAGKAKVKNVSKP 60

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
            RG F+   V PKKKL EFRV  DD +L VG+  S ++F  GQ VDVTG + GKGF+GAM
Sbjct: 61  NRGHFAKAKVEPKKKLAEFRV-ADDSVLEVGASLSAAHFVAGQKVDVTGTSKGKGFAGAM 119

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR NF GL ATHGVSISHRSHGSTG RQDPG+VFKNKKMAG +G  RVT  NLE+ +VD 
Sbjct: 120 KRWNFAGLEATHGVSISHRSHGSTGNRQDPGKVFKNKKMAGHLGSERVTTLNLEIAAVDA 179

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           ++ LI+++G VPG  KN  +LVRD+ K A + +  
Sbjct: 180 EKNLIMIRGSVPGG-KNETVLVRDAIKKARHAEAP 213


>gi|261346935|ref|ZP_05974579.1| 50S ribosomal protein L3 [Providencia rustigianii DSM 4541]
 gi|282565000|gb|EFB70535.1| 50S ribosomal protein L3 [Providencia rustigianii DSM 4541]
          Length = 209

 Score =  265 bits (679), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 94/210 (44%), Positives = 132/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++N +V   +T + +GY A+QV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKTAETDGYNAIQVTTGSKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L EFR ++  +    G   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRILREFRTEEGTEF-KAGESISVEIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSNLIVKPAVKA 209


>gi|170757219|ref|YP_001783121.1| 50S ribosomal protein L3 [Clostridium botulinum B1 str. Okra]
 gi|226725153|sp|B1IGF4|RL3_CLOBK RecName: Full=50S ribosomal protein L3
 gi|169122431|gb|ACA46267.1| 50S ribosomal protein L3 [Clostridium botulinum B1 str. Okra]
          Length = 209

 Score =  265 bits (679), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 85/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +KLGMT ++N  G+ IPVTV+    C V+  +T++K+GY A+QV  G+ + K 
Sbjct: 1   MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP++G F+   VS K+ + EF++ +D + L +G       F  G+ VD++G++ GKGF
Sbjct: 61  RNKPVKGHFAKAGVSVKRHIKEFKL-EDSNSLEIGQEIKADVFEAGERVDISGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G ++R N      +HG S  HR+ GS G   DP R FKNK+M G MG    TV NLEVV
Sbjct: 120 QGTIRRWNAHRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  ++ LIL+KG VPG  K   + +R++ K+
Sbjct: 179 KIIPEKNLILIKGGVPGPNKG-LVQIRNTVKA 209


>gi|296131836|ref|YP_003639083.1| 50S ribosomal protein L3 [Thermincola sp. JR]
 gi|296030414|gb|ADG81182.1| 50S ribosomal protein L3 [Thermincola potens JR]
          Length = 209

 Score =  265 bits (679), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 88/212 (41%), Positives = 130/212 (61%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++N +G  +PVTV+    C VV  +T++ +GY ++Q+G GE +   
Sbjct: 1   MSKGILGKKIGMTQIFNEQGEVLPVTVVEAGPCVVVQKKTVETDGYNSIQLGFGEKRESL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP++G F+   V P K L EF+V   DD   +G       F  G+ VDV G + GKGF
Sbjct: 61  LTKPLKGHFAKAGVKPMKYLKEFKVVNIDD-YQLGQEIKVDIFEAGERVDVEGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR+NF      HG S SHR  GS G +  P RVFK  K  G +G  +VT++NLE+V
Sbjct: 120 AGTIKRYNFQRGPMAHG-SKSHRRVGSAGAKG-PARVFKGTKRPGHLGAEKVTIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG +PG  K S + V+ S K+
Sbjct: 178 KVDPERNLLLIKGAIPGP-KGSLVAVKSSVKA 208


>gi|239623347|ref|ZP_04666378.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239522313|gb|EEQ62179.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 226

 Score =  265 bits (678), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 90/211 (42%), Positives = 122/211 (57%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N  G  +PVTVL    C V   +T + +GY AVQVG  + + K 
Sbjct: 16  MKKAILATKVGMTQIFNENGALVPVTVLQAGPCVVTQVKTAENDGYKAVQVGFVDKREKL 75

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKP+RG F    VS K+ + EF+ +  ++   V        F  G  +D T ++ GKGF
Sbjct: 76  VSKPLRGHFDKAGVSYKRYVREFKFENAEE-YSVKDEIKADIFAAGDKIDATAISKGKGF 134

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR+        HG S  HR  GS G    PGRVFK K M G MG  ++TV+NLEVV
Sbjct: 135 QGAIKRYGQHRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGHMGSKKITVQNLEVV 193

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD    LILVKG VPG KK S + ++++ K
Sbjct: 194 KVDTDNNLILVKGAVPGPKK-SLVTIKETVK 223


>gi|323164885|gb|EFZ50676.1| ribosomal L3 family protein [Shigella sonnei 53G]
          Length = 209

 Score =  265 bits (678), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFAEVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|114704484|ref|ZP_01437392.1| 50S ribosomal protein L3 [Fulvimarina pelagi HTCC2506]
 gi|114539269|gb|EAU42389.1| 50S ribosomal protein L3 [Fulvimarina pelagi HTCC2506]
          Length = 241

 Score =  265 bits (678), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 133/219 (60%), Positives = 167/219 (76%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT +Y   G  +PVTVL ++N QVV  RT DKNGY AVQVGAG AKVKN
Sbjct: 1   MRSGVIAQKVGMTRIYTDAGEHVPVTVLKVENLQVVGQRTQDKNGYTAVQVGAGLAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+   V PK+KL EFRV +D +++ +G+  +  +F  GQ+VDVTG +IGKGF
Sbjct: 61  TSKAMRGVFAQAKVEPKRKLVEFRVTED-NMIDIGAEITADHFVEGQMVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGG+RATHGVSISHR+HGSTG  QDPG+VFK KKMAG MG  RVT +NL++V
Sbjct: 120 AGAMKRHNFGGMRATHGVSISHRAHGSTGQNQDPGKVFKGKKMAGHMGQERVTTQNLQIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
             D ++GLILV+G VPGA K  WI +RD+ K+++     
Sbjct: 180 RTDAEKGLILVRGAVPGA-KGGWIEIRDAVKASLPDNAP 217


>gi|294055221|ref|YP_003548879.1| 50S ribosomal protein L3 [Coraliomargarita akajimensis DSM 45221]
 gi|293614554|gb|ADE54709.1| 50S ribosomal protein L3 [Coraliomargarita akajimensis DSM 45221]
          Length = 214

 Score =  265 bits (678), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 90/212 (42%), Positives = 122/212 (57%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT V++   R +PVTV+    C V   +T +K+GY AVQ+G    K   
Sbjct: 1   MKVALLGKKIGMTQVFDENNRLVPVTVIEAGPCPVTQVKTSEKDGYSAVQIGYRAQKEHR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SK   G F    V P  +L EFRV  + + L VG V +   F  GQ +DV G T G+GF
Sbjct: 61  LSKAALGHFKKAGVEPLAELREFRVAAEGE-LNVGDVLTVEKFEAGQKIDVIGTTKGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR  F G  A+HG S+ HR  GS G  Q PG V K KKM G MG  + TV+NL VV
Sbjct: 120 QGVVKRWGFHGGPASHG-SMFHRRGGSYGMCQWPGHVIKGKKMPGHMGDKQRTVQNLTVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V   + LILVKG +PG+ +   + VR + K+
Sbjct: 179 KVLADKNLILVKGSIPGS-RGGLVTVRTAIKN 209


>gi|262203624|ref|YP_003274832.1| 50S ribosomal protein L3 [Gordonia bronchialis DSM 43247]
 gi|262086971|gb|ACY22939.1| 50S ribosomal protein L3 [Gordonia bronchialis DSM 43247]
          Length = 219

 Score =  265 bits (678), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 94/215 (43%), Positives = 128/215 (59%), Gaps = 2/215 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
             G++  KLGMT V++   R +PVTV+      +   RT D++GY AVQ+  G    + V
Sbjct: 7   TKGILGTKLGMTQVFDENNRVVPVTVIQAGPNVITQLRTADRDGYTAVQLAYGAIDPRKV 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G +S   V+P++ L E RV  D     VG   +   F  G LVDVTG + GKGF+
Sbjct: 67  TKPVAGQYSKAGVTPRRHLAEIRV-NDVSEFEVGQELTAEVFAEGSLVDVTGTSKGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F GL A+HG    HR+ GS G    PGRVFK  +MAGRMG ++VT +NL V  
Sbjct: 126 GVMKRHGFSGLGASHGAHRVHRAPGSIGGCATPGRVFKGMRMAGRMGNDKVTTQNLTVHK 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           VD + GL+L+KG +PG +K   ++VRD+ K     
Sbjct: 186 VDAEAGLLLIKGAIPG-RKGGIVVVRDAVKGGAKA 219


>gi|218187896|gb|EEC70323.1| hypothetical protein OsI_01192 [Oryza sativa Indica Group]
          Length = 319

 Score =  265 bits (678), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 102/209 (48%), Positives = 145/209 (69%), Gaps = 2/209 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GV+  K GM+ +++  G ++P+TVL +D+  V   +T +K G+ A+Q+GAG+ K K++
Sbjct: 74  RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVCQVKTAEKEGFFALQLGAGQKKEKHL 133

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F +  V  K+KL EF V +D  L+P+G+  +  +F  GQ VDVTG+T GKGF+
Sbjct: 134 TKPEVGHFRAQGVPLKRKLREFPVTED-ALIPLGTTITVRHFVPGQFVDVTGITKGKGFA 192

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F G+ A+HG S+SHRS GSTG R  PGRVFKN+KM GRMGG + TVKN+ V  
Sbjct: 193 GGMKRHGFSGMPASHGASLSHRSIGSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 252

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           +D  R L+ +KG VPG +  S++ V+DS 
Sbjct: 253 IDPARNLLYLKGQVPGPQ-GSFVFVKDSI 280


>gi|115435682|ref|NP_001042599.1| Os01g0251100 [Oryza sativa Japonica Group]
 gi|7106521|dbj|BAA92206.1| putative ribosomal protein L3 [Oryza sativa Japonica Group]
 gi|113532130|dbj|BAF04513.1| Os01g0251100 [Oryza sativa Japonica Group]
 gi|215678787|dbj|BAG95224.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215707174|dbj|BAG93634.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222618109|gb|EEE54241.1| hypothetical protein OsJ_01115 [Oryza sativa Japonica Group]
          Length = 319

 Score =  265 bits (678), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 102/209 (48%), Positives = 145/209 (69%), Gaps = 2/209 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GV+  K GM+ +++  G ++P+TVL +D+  V   +T +K G+ A+Q+GAG+ K K++
Sbjct: 74  RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVCQVKTAEKEGFFALQLGAGQKKEKHL 133

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F +  V  K+KL EF V +D  L+P+G+  +  +F  GQ VDVTG+T GKGF+
Sbjct: 134 TKPEVGHFRAQGVPLKRKLREFPVTED-ALIPLGTTITVRHFVPGQFVDVTGITKGKGFA 192

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F G+ A+HG S+SHRS GSTG R  PGRVFKN+KM GRMGG + TVKN+ V  
Sbjct: 193 GGMKRHGFSGMPASHGASLSHRSIGSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 252

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           +D  R L+ +KG VPG +  S++ V+DS 
Sbjct: 253 IDPARNLLYLKGQVPGPQ-GSFVFVKDSI 280


>gi|326404337|ref|YP_004284419.1| 50S ribosomal protein L3 [Acidiphilium multivorum AIU301]
 gi|325051199|dbj|BAJ81537.1| 50S ribosomal protein L3 [Acidiphilium multivorum AIU301]
          Length = 225

 Score =  265 bits (678), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 123/218 (56%), Positives = 164/218 (75%), Gaps = 2/218 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+KLGMT ++  +G  +PVTVLH+D+ +VV  RT +++GY AVQ+G G AK KN
Sbjct: 2   MRTGIIAKKLGMTRLFREDGTHVPVTVLHMDDVRVVAARTKERDGYAAVQLGFGHAKTKN 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+G F++  V P  +L EFRV  DD +L  G V S ++FTVGQ VDV G++ GKGF
Sbjct: 62  VTKPMKGHFAAAKVEPANRLVEFRV-ADDAVLEAGQVLSAAHFTVGQKVDVAGISKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NF GL A+HGVSISHRS GSTG RQDPG+ F+NKKMAG +GG R+T  NLEV 
Sbjct: 121 AGGMKRWNFRGLEASHGVSISHRSLGSTGNRQDPGKTFRNKKMAGHLGGERITTLNLEVA 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           ++D+ R LI++KG VPGA K+ ++LVRD+ K+A     
Sbjct: 181 AIDEARNLIMIKGAVPGA-KDGYVLVRDAVKTARPADA 217


>gi|293393311|ref|ZP_06637625.1| 50S ribosomal protein L3 [Serratia odorifera DSM 4582]
 gi|291424221|gb|EFE97436.1| 50S ribosomal protein L3 [Serratia odorifera DSM 4582]
          Length = 209

 Score =  265 bits (678), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 94/210 (44%), Positives = 131/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + LD +GY A+QV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLDNDGYRAIQVTTGSKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+++  +    G   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLEEGQEF-AAGQEISVEIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG +G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   + I V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGATGGNLI-VKPAVKA 209


>gi|71905961|ref|YP_283548.1| 50S ribosomal protein L3 [Dechloromonas aromatica RCB]
 gi|109893424|sp|Q47JA3|RL3_DECAR RecName: Full=50S ribosomal protein L3
 gi|71845582|gb|AAZ45078.1| LSU ribosomal protein L3P [Dechloromonas aromatica RCB]
          Length = 212

 Score =  265 bits (678), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 96/213 (45%), Positives = 132/213 (61%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTVL + N +V   +T + +GY A+QV  G+ +   
Sbjct: 1   MSLGLVGRKVGMTRIFAEDGASIPVTVLDVSNNRVTQVKTPEIDGYAAIQVAFGKRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           VSKP+ G  +   V     L EF+++ D       G   + + F  GQ VDVTG +IGKG
Sbjct: 61  VSKPLAGHLAKAGVEAGHVLKEFQIEADQLASFKAGDQVAVTIFAEGQKVDVTGTSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KRHNF   RA+HG S+SH + GS G  QDPGRVF  K+MAG +G  + T++ L +
Sbjct: 121 FQGGIKRHNFSSNRASHGNSLSHNAPGSIGMAQDPGRVFPGKRMAGHLGDVQSTMQGLTI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD  R L+LVKG VPGA K S ++VR + K+
Sbjct: 181 VRVDADRQLLLVKGAVPGA-KGSDVVVRPAVKA 212


>gi|255526578|ref|ZP_05393485.1| ribosomal protein L3 [Clostridium carboxidivorans P7]
 gi|296187266|ref|ZP_06855662.1| 50S ribosomal protein L3 [Clostridium carboxidivorans P7]
 gi|255509686|gb|EET86019.1| ribosomal protein L3 [Clostridium carboxidivorans P7]
 gi|296048137|gb|EFG87575.1| 50S ribosomal protein L3 [Clostridium carboxidivorans P7]
          Length = 209

 Score =  265 bits (678), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 83/212 (39%), Positives = 127/212 (59%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +KLGMT +++  G+ +PVTV+    C V   +T +K+GY A+Q+G  + + K 
Sbjct: 1   MKKAILGKKLGMTQIFDENGKIVPVTVIEAGPCVVFQKKTTEKDGYEAIQLGFDDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+G F+    + K+ + E RV +D     VG       F  G+ +DV+G++ GKGF
Sbjct: 61  VNKPMKGHFAKAGAALKRFVKEIRV-EDISAYEVGQEIKADVFAAGEKIDVSGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR N      +HG S  HR+ GS G   DP R FKNKK+ G MG    TV NLEV 
Sbjct: 120 QGTIKRWNAQRGPMSHG-SKFHRAPGSMGASSDPSRTFKNKKLPGHMGNVNTTVLNLEVA 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ +IL+KG VPG  K  ++++R++ K+
Sbjct: 179 KVMPEKNIILIKGGVPGPNKG-FVVIRNTVKA 209


>gi|15803847|ref|NP_289881.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 EDL933]
 gi|15833439|ref|NP_312212.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 str. Sakai]
 gi|16131199|ref|NP_417779.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12
           substr. MG1655]
 gi|24114598|ref|NP_709108.1| 50S ribosomal protein L3 [Shigella flexneri 2a str. 301]
 gi|26249915|ref|NP_755955.1| 50S ribosomal protein L3 [Escherichia coli CFT073]
 gi|30065379|ref|NP_839550.1| 50S ribosomal protein L3 [Shigella flexneri 2a str. 2457T]
 gi|82545683|ref|YP_409630.1| 50S ribosomal protein L3 [Shigella boydii Sb227]
 gi|82778616|ref|YP_404965.1| 50S ribosomal protein L3 [Shigella dysenteriae Sd197]
 gi|89110690|ref|AP_004470.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12
           substr. W3110]
 gi|91212757|ref|YP_542743.1| 50S ribosomal protein L3 [Escherichia coli UTI89]
 gi|110643559|ref|YP_671289.1| 50S ribosomal protein L3 [Escherichia coli 536]
 gi|110807167|ref|YP_690687.1| 50S ribosomal protein L3 [Shigella flexneri 5 str. 8401]
 gi|117625598|ref|YP_858921.1| 50S ribosomal protein L3 [Escherichia coli APEC O1]
 gi|157156606|ref|YP_001464788.1| 50S ribosomal protein L3 [Escherichia coli E24377A]
 gi|157162794|ref|YP_001460112.1| 50S ribosomal protein L3 [Escherichia coli HS]
 gi|168752799|ref|ZP_02777821.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4113]
 gi|168753088|ref|ZP_02778095.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4401]
 gi|168769186|ref|ZP_02794193.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4486]
 gi|168785139|ref|ZP_02810146.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC869]
 gi|170018444|ref|YP_001723398.1| 50S ribosomal protein L3 [Escherichia coli ATCC 8739]
 gi|170082839|ref|YP_001732159.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12
           substr. DH10B]
 gi|170680319|ref|YP_001745582.1| 50S ribosomal protein L3 [Escherichia coli SMS-3-5]
 gi|187733677|ref|YP_001882004.1| 50S ribosomal protein L3 [Shigella boydii CDC 3083-94]
 gi|188495143|ref|ZP_03002413.1| ribosomal protein L3 [Escherichia coli 53638]
 gi|191171516|ref|ZP_03033064.1| ribosomal protein L3 [Escherichia coli F11]
 gi|195939869|ref|ZP_03085251.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 str. EC4024]
 gi|208806486|ref|ZP_03248823.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4206]
 gi|208812110|ref|ZP_03253439.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4045]
 gi|208818332|ref|ZP_03258652.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4042]
 gi|209398982|ref|YP_002272776.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4115]
 gi|209920786|ref|YP_002294870.1| 50S ribosomal protein L3 [Escherichia coli SE11]
 gi|215488620|ref|YP_002331051.1| 50S ribosomal protein L3 [Escherichia coli O127:H6 str. E2348/69]
 gi|217325713|ref|ZP_03441797.1| ribosomal protein L3 [Escherichia coli O157:H7 str. TW14588]
 gi|218550595|ref|YP_002384386.1| 50S ribosomal protein L3 [Escherichia fergusonii ATCC 35469]
 gi|218555877|ref|YP_002388790.1| 50S ribosomal protein L3 [Escherichia coli IAI1]
 gi|218560381|ref|YP_002393294.1| 50S ribosomal protein L3 [Escherichia coli S88]
 gi|218691606|ref|YP_002399818.1| 50S ribosomal protein L3 [Escherichia coli ED1a]
 gi|218697012|ref|YP_002404679.1| 50S ribosomal protein L3 [Escherichia coli 55989]
 gi|218702082|ref|YP_002409711.1| 50S ribosomal protein L3 [Escherichia coli IAI39]
 gi|218706927|ref|YP_002414446.1| 50S ribosomal protein L3 [Escherichia coli UMN026]
 gi|227883451|ref|ZP_04001256.1| 50S ribosomal protein L3 [Escherichia coli 83972]
 gi|237703050|ref|ZP_04533531.1| ribosomal protein L3 [Escherichia sp. 3_2_53FAA]
 gi|238902411|ref|YP_002928207.1| 50S ribosomal subunit protein L3 [Escherichia coli BW2952]
 gi|253771856|ref|YP_003034687.1| 50S ribosomal protein L3 [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254038481|ref|ZP_04872537.1| 50S ribosomal protein L3 [Escherichia sp. 1_1_43]
 gi|254163248|ref|YP_003046356.1| 50S ribosomal protein L3 [Escherichia coli B str. REL606]
 gi|254795257|ref|YP_003080094.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 str. TW14359]
 gi|256020679|ref|ZP_05434544.1| 50S ribosomal protein L3 [Shigella sp. D9]
 gi|260846118|ref|YP_003223896.1| 50S ribosomal subunit protein L3 [Escherichia coli O103:H2 str.
           12009]
 gi|260857441|ref|YP_003231332.1| 50S ribosomal subunit protein L3 [Escherichia coli O26:H11 str.
           11368]
 gi|260870063|ref|YP_003236465.1| 50S ribosomal subunit protein L3 [Escherichia coli O111:H- str.
           11128]
 gi|261224625|ref|ZP_05938906.1| 50S ribosomal subunit protein L3 [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261254481|ref|ZP_05947014.1| 50S ribosomal subunit protein L3 [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291284678|ref|YP_003501496.1| 50S ribosomal protein L3 [Escherichia coli O55:H7 str. CB9615]
 gi|293406917|ref|ZP_06650841.1| 50S ribosomal protein L3 [Escherichia coli FVEC1412]
 gi|293412739|ref|ZP_06655407.1| 50S ribosomal protein L3 [Escherichia coli B354]
 gi|293416737|ref|ZP_06659374.1| 50S ribosomal protein L3 [Escherichia coli B185]
 gi|293453638|ref|ZP_06664057.1| 50S ribosomal protein L3 [Escherichia coli B088]
 gi|297516596|ref|ZP_06934982.1| 50S ribosomal protein L3 [Escherichia coli OP50]
 gi|298382657|ref|ZP_06992252.1| 50S ribosomal protein L3 [Escherichia coli FVEC1302]
 gi|300815470|ref|ZP_07095695.1| 50S ribosomal protein L3 [Escherichia coli MS 107-1]
 gi|300822877|ref|ZP_07103013.1| 50S ribosomal protein L3 [Escherichia coli MS 119-7]
 gi|300896668|ref|ZP_07115184.1| 50S ribosomal protein L3 [Escherichia coli MS 198-1]
 gi|300903568|ref|ZP_07121490.1| 50S ribosomal protein L3 [Escherichia coli MS 84-1]
 gi|300918293|ref|ZP_07134897.1| 50S ribosomal protein L3 [Escherichia coli MS 115-1]
 gi|300921871|ref|ZP_07138027.1| 50S ribosomal protein L3 [Escherichia coli MS 182-1]
 gi|300932213|ref|ZP_07147492.1| 50S ribosomal protein L3 [Escherichia coli MS 187-1]
 gi|300935318|ref|ZP_07150328.1| 50S ribosomal protein L3 [Escherichia coli MS 21-1]
 gi|300946542|ref|ZP_07160807.1| 50S ribosomal protein L3 [Escherichia coli MS 116-1]
 gi|300954805|ref|ZP_07167232.1| 50S ribosomal protein L3 [Escherichia coli MS 175-1]
 gi|300973999|ref|ZP_07172406.1| 50S ribosomal protein L3 [Escherichia coli MS 200-1]
 gi|300979891|ref|ZP_07174767.1| 50S ribosomal protein L3 [Escherichia coli MS 45-1]
 gi|301018816|ref|ZP_07183060.1| 50S ribosomal protein L3 [Escherichia coli MS 69-1]
 gi|301021130|ref|ZP_07185170.1| 50S ribosomal protein L3 [Escherichia coli MS 196-1]
 gi|301046091|ref|ZP_07193269.1| 50S ribosomal protein L3 [Escherichia coli MS 185-1]
 gi|301305529|ref|ZP_07211621.1| 50S ribosomal protein L3 [Escherichia coli MS 124-1]
 gi|301325113|ref|ZP_07218647.1| 50S ribosomal protein L3 [Escherichia coli MS 78-1]
 gi|301643860|ref|ZP_07243891.1| 50S ribosomal protein L3 [Escherichia coli MS 146-1]
 gi|306816337|ref|ZP_07450475.1| 50S ribosomal protein L3 [Escherichia coli NC101]
 gi|307140003|ref|ZP_07499359.1| 50S ribosomal protein L3 [Escherichia coli H736]
 gi|307315101|ref|ZP_07594684.1| 50S ribosomal protein L3 [Escherichia coli W]
 gi|309785642|ref|ZP_07680273.1| ribosomal L3 family protein [Shigella dysenteriae 1617]
 gi|309794595|ref|ZP_07689017.1| 50S ribosomal protein L3 [Escherichia coli MS 145-7]
 gi|312968355|ref|ZP_07782565.1| ribosomal L3 family protein [Escherichia coli 2362-75]
 gi|312972419|ref|ZP_07786593.1| ribosomal L3 family protein [Escherichia coli 1827-70]
 gi|331644016|ref|ZP_08345145.1| 50S ribosomal protein L3 [Escherichia coli H736]
 gi|331649117|ref|ZP_08350203.1| 50S ribosomal protein L3 [Escherichia coli M605]
 gi|331654913|ref|ZP_08355912.1| 50S ribosomal protein L3 [Escherichia coli M718]
 gi|331659610|ref|ZP_08360548.1| 50S ribosomal protein L3 [Escherichia coli TA206]
 gi|331664933|ref|ZP_08365834.1| 50S ribosomal protein L3 [Escherichia coli TA143]
 gi|331670149|ref|ZP_08370988.1| 50S ribosomal protein L3 [Escherichia coli TA271]
 gi|331679389|ref|ZP_08380059.1| 50S ribosomal protein L3 [Escherichia coli H591]
 gi|331684962|ref|ZP_08385548.1| 50S ribosomal protein L3 [Escherichia coli H299]
 gi|42560216|sp|P60438|RL3_ECOLI RecName: Full=50S ribosomal protein L3
 gi|42560217|sp|P60439|RL3_ECOL6 RecName: Full=50S ribosomal protein L3
 gi|42560218|sp|P60440|RL3_ECO57 RecName: Full=50S ribosomal protein L3
 gi|42560221|sp|P60447|RL3_SHIFL RecName: Full=50S ribosomal protein L3
 gi|109893554|sp|Q31VV6|RL3_SHIBS RecName: Full=50S ribosomal protein L3
 gi|109893555|sp|Q32B31|RL3_SHIDS RecName: Full=50S ribosomal protein L3
 gi|123048781|sp|Q0TCE1|RL3_ECOL5 RecName: Full=50S ribosomal protein L3
 gi|123084373|sp|Q1R602|RL3_ECOUT RecName: Full=50S ribosomal protein L3
 gi|123342427|sp|Q0SZY3|RL3_SHIF8 RecName: Full=50S ribosomal protein L3
 gi|166233140|sp|A1AGK7|RL3_ECOK1 RecName: Full=50S ribosomal protein L3
 gi|166990934|sp|A7ZSK9|RL3_ECO24 RecName: Full=50S ribosomal protein L3
 gi|166990935|sp|A8A5C5|RL3_ECOHS RecName: Full=50S ribosomal protein L3
 gi|189042843|sp|B1IPX9|RL3_ECOLC RecName: Full=50S ribosomal protein L3
 gi|226725166|sp|B7MCT5|RL3_ECO45 RecName: Full=50S ribosomal protein L3
 gi|226725167|sp|B5YTP1|RL3_ECO5E RecName: Full=50S ribosomal protein L3
 gi|226725168|sp|B7NLN9|RL3_ECO7I RecName: Full=50S ribosomal protein L3
 gi|226725169|sp|B7M1N4|RL3_ECO8A RecName: Full=50S ribosomal protein L3
 gi|226725170|sp|B1X6H1|RL3_ECODH RecName: Full=50S ribosomal protein L3
 gi|226725171|sp|B7NDU1|RL3_ECOLU RecName: Full=50S ribosomal protein L3
 gi|226725172|sp|B6I234|RL3_ECOSE RecName: Full=50S ribosomal protein L3
 gi|226725173|sp|B1LHD4|RL3_ECOSM RecName: Full=50S ribosomal protein L3
 gi|226725175|sp|B7LS40|RL3_ESCF3 RecName: Full=50S ribosomal protein L3
 gi|226730569|sp|B2U2T8|RL3_SHIB3 RecName: Full=50S ribosomal protein L3
 gi|254803671|sp|B7UK44|RL3_ECO27 RecName: Full=50S ribosomal protein L3
 gi|254803672|sp|B7L4K9|RL3_ECO55 RecName: Full=50S ribosomal protein L3
 gi|254803673|sp|B7N0W0|RL3_ECO81 RecName: Full=50S ribosomal protein L3
 gi|259647744|sp|C4ZUH5|RL3_ECOBW RecName: Full=50S ribosomal protein L3
 gi|33357903|pdb|1P85|B Chain B, Real Space Refined Coordinates Of The 50s Subunit Fitted
           Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp
           State Of E. Coli 70s Ribosome
 gi|33357931|pdb|1P86|B Chain B, Real Space Refined Coordinates Of The 50s Subunit Fitted
           Into The Low Resolution Cryo-Em Map Of The
           Initiation-Like State Of E. Coli 70s Ribosome
 gi|83754065|pdb|2AW4|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli At 3.5 A Resolution. This File Contains
           The 50s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|83754121|pdb|2AWB|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli At 3.5 A Resolution. This File Contains
           The 50s Subunit Of The Second 70s Ribosome. The Entire
           Crystal Structure Contains Two 70s Ribosomes And Is
           Described In Remark 400.
 gi|116666574|pdb|1VS6|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With The Antibiotic
           Kasugamyin At 3.5a Resolution. This File Contains The
           50s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|116666626|pdb|1VS8|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With The Antibiotic
           Kasugamyin At 3.5a Resolution. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|116667436|pdb|2GYA|B Chain B, Structure Of The 50s Subunit Of A Pre-Translocational E.
           Coli Ribosome Obtained By Fitting Atomic Models For Rna
           And Protein Components Into Cryo-Em Map Emd-1056
 gi|116667488|pdb|2GYC|B Chain B, Structure Of The 50s Subunit Of A Secm-Stalled E. Coli
           Ribosome Complex Obtained By Fitting Atomic Models For
           Rna And Protein Components Into Cryo-Em Map Emd-1143
 gi|118138094|pdb|2I2T|D Chain D, Crystal Structure Of Ribosome With Messenger Rna And The
           Anticodon Stem-Loop Of P-Site Trna. This File Contains
           The 50s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|118138148|pdb|2I2V|D Chain D, Crystal Structure Of Ribosome With Messenger Rna And The
           Anticodon Stem-Loop Of P-Site Trna. This File Contains
           The 50s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|119390348|pdb|2J28|D Chain D, Model Of E. Coli Srp Bound To 70s Rncs
 gi|157836049|pdb|2QOV|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Spectinomycin. This
           File Contains The 50s Subunit Of The First 70s Ribosome.
           The Entire Crystal Structure Contains Two 70s Ribosomes.
 gi|157836101|pdb|2QOX|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Spectinomycin. This
           File Contains The 50s Subunit Of The Second 70s
           Ribosome. The Entire Crystal Structure Contains Two 70s
           Ribosomes.
 gi|157836153|pdb|2QOZ|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Spectinomycin And
           Neomycin. This File Contains The 50s Subunit Of The
           First 70s Ribosome, With Neomycin Bound. The Entire
           Crystal Structure Contains Two 70s Ribosomes.
 gi|157836205|pdb|2QP1|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Spectinomycin And
           Neomycin. This File Contains The 50s Subunit Of The
           Second 70s Ribosome, With Neomycin Bound. The Entire
           Crystal Structure Contains Two 70s Ribosomes.
 gi|158429724|pdb|2QAM|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Neomycin. This File
           Contains The 50s Subunit Of The First 70s Ribosome, With
           Neomycin Bound. The Entire Crystal Structure Contains
           Two 70s Ribosomes And Is Described In Remark 400.
 gi|158429776|pdb|2QAO|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Neomycin. This File
           Contains The 50s Subunit Of The Second 70s Ribosome,
           With Neomycin Bound. The Entire Crystal Structure
           Contains Two 70s Ribosomes And Is Described In Remark
           400.
 gi|158429834|pdb|2QBA|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Gentamicin. This File
           Contains The 50s Subunit Of The First 70s Ribosome, With
           Gentamicin Bound. The Entire Crystal Structure Contains
           Two 70s Ribosomes And Is Described In Remark 400.
 gi|158429886|pdb|2QBC|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Gentamicin. This File
           Contains The 50s Subunit Of The Second 70s Ribosome,
           With Gentamicin Bound. The Entire Crystal Structure
           Contains Two 70s Ribosomes And Is Described In Remark
           400.
 gi|158429938|pdb|2QBE|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Ribosome Recycling
           Factor (Rrf). This File Contains The 50s Subunit Of The
           First 70s Ribosome, With Rrf Bound. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|158429991|pdb|2QBG|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Ribosome Recycling
           Factor (Rrf). This File Contains The 50s Subunit Of The
           Second 70s Ribosome, With Rrf Bound. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|158430044|pdb|2QBI|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Gentamicin And Ribosome
           Recycling Factor (Rrf). This File Contains The 50s
           Subunit Of The First 70s Ribosome, With Gentamicin And
           Rrf Bound. The Entire Crystal Structure Contains Two 70s
           Ribosomes And Is Described In Remark 400.
 gi|158430097|pdb|2QBK|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Gentamicin And Ribosome
           Recycling Factor (Rrf). This File Contains The 50s
           Subunit Of The Second 70s Ribosome, With Gentamicin And
           Rrf Bound. The Entire Crystal Structure Contains Two 70s
           Ribosomes And Is Described In Remark 400.
 gi|158431397|pdb|2Z4L|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Paromomycin And
           Ribosome Recycling Factor (Rrf). This File Contains The
           50s Subunit Of The First 70s Ribosome, With Paromomycin
           And Rrf Bound. The Entire Crystal Structure Contains Two
           70s Ribosomes And Is Described In Remark 400.
 gi|158431450|pdb|2Z4N|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Paromomycin And
           Ribosome Recycling Factor (Rrf). This File Contains The
           50s Subunit Of The Second 70s Ribosome, With Paromomycin
           And Rrf Bound. The Entire Crystal Structure Contains Two
           70s Ribosomes And Is Described In Remark 400.
 gi|168988734|pdb|2VHM|D Chain D, Structure Of Pdf Binding Helix In Complex With The
           Ribosome (Part 1 Of 4)
 gi|168988765|pdb|2VHN|D Chain D, Structure Of Pdf Binding Helix In Complex With The
           Ribosome. (Part 2 Of 4)
 gi|169404606|pdb|2RDO|D Chain D, 50s Subunit With Ef-G(Gdpnp) And Rrf Bound
 gi|197107304|pdb|3DF2|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Hygromycin B. This File
           Contains The 50s Subunit Of The First 70s Ribosome. The
           Entire Crystal Structure Contains Two 70s Ribosomes.
 gi|197107356|pdb|3DF4|D Chain D, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Hygromycin B. This File
           Contains The 50s Subunit Of The Second 70s Ribosome. The
           Entire Crystal Structure Contains Two 70s Ribosomes.
 gi|209870357|pdb|3BBX|D Chain D, The Hsp15 Protein Fitted Into The Low Resolution Cryo-Em
           Map 50s.Nc-Trna.Hsp15 Complex
 gi|224510762|pdb|3FIK|D Chain D, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry
           Consists Of The 50s Subunit.
 gi|251837155|pdb|3IY9|C Chain C, Leishmania Tarentolae Mitochondrial Large Ribosomal
           Subunit Model
 gi|256032397|pdb|3E1B|Y Chain Y, Structure Of The 50s Subunit Of E. Coli Ribosome In Pre-
           Accommodation State
 gi|256032454|pdb|3E1D|Y Chain Y, Structure Of The 50s Subunit Of E. Coli Ribosome In Post-
           Accommodation State
 gi|257097345|pdb|3I1N|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|257097397|pdb|3I1P|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|257097451|pdb|3I1R|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|257097505|pdb|3I1T|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|257097560|pdb|3I20|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|257097615|pdb|3I22|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|290560335|pdb|3KCR|D Chain D, Ribosome-Secy Complex. This Entry 3kcr Contains 50s
           Ribosomal Subnit. The 30s Ribosomal Subunit Can Be Found
           In Pdb Entry 3kc4
 gi|294662253|pdb|2WWQ|D Chain D, E.Coli 70s Ribosome Stalled During Translation Of Tnac
           Leader Peptide. This File Contains The 50s, The P-Site
           Trna And The Tnac Leader Peptide (Part 2 Of 2).
 gi|308198358|pdb|1VT2|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Cem-101. This File Contains The 50s Subunit Of The
           Second 70s Ribosome.
 gi|308198732|pdb|3ORB|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Cem-101. This File Contains The 50s Subunit Of The First
           70s Ribosome Bound To Cem-101.
 gi|308388010|pdb|3OFQ|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Erythromycin. This File Contains The 50s Subunit Of The
           Second 70s Ribosome.
 gi|308388041|pdb|3OFR|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Erythromycin. This File Contains The 50s Subunit Of The
           First 70s Ribosome With Erthromycin Bound.
 gi|309320068|pdb|3OFC|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Chloramphenicol. This File Contains The 50s Subunit Of
           The First 70s Ribosome With Chloramphenicol Bound.
 gi|309320099|pdb|3OFD|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Chloramphenicol. This File Contains The 50s Subunit Of
           The Second 70s Ribosome.
 gi|309320172|pdb|3OFZ|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Clindamycin. This File Contains The 50s Subunit Of The
           First 70s Ribosome Bound To Clindamycin.
 gi|309320203|pdb|3OG0|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Clindamycin. This File Contains The 50s Subunit Of The
           Second 70s Ribosome.
 gi|315113657|pdb|3OAS|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Telithromycin. This File Contains The 50s Subunit Of The
           Second 70s Ribosome.
 gi|315113688|pdb|3OAT|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
           Telithromycin. This File Contains The 50s Subunit Of The
           First 70s Ribosome With Telithromycin Bound.
 gi|326634213|pdb|3IZT|E Chain E, Structural Insights Into Cognate Vs. Near-Cognate
           Discrimination During Decoding. This Entry Contains The
           Large Subunit Of A Ribosome Programmed With A
           Near-Cognate Codon.
 gi|326634246|pdb|3IZU|E Chain E, Structural Insights Into Cognate Vs. Near-Cognate
           Discrimination During Decoding. This Entry Contains The
           Large Subunit Of A Ribosome Programmed With A Cognate
           Codon
 gi|329666019|pdb|3J01|D Chain D, Structure Of The Ribosome-Secye Complex In The Membrane
           Environment
 gi|12517952|gb|AAG58441.1|AE005557_10 50S ribosomal subunit protein L3 [Escherichia coli O157:H7 str.
           EDL933]
 gi|26110343|gb|AAN82529.1|AE016767_289 50S ribosomal protein L3 [Escherichia coli CFT073]
 gi|42827|emb|CAA26460.1| unnamed protein product [Escherichia coli]
 gi|606254|gb|AAA58117.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12
           substr. MG1655]
 gi|1789716|gb|AAC76345.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12
           substr. MG1655]
 gi|13363658|dbj|BAB37608.1| 50S ribosomal subunit protein L3 [Escherichia coli O157:H7 str.
           Sakai]
 gi|24053796|gb|AAN44815.1| 50S ribosomal subunit protein L3 [Shigella flexneri 2a str. 301]
 gi|30043641|gb|AAP19361.1| 50S ribosomal subunit protein L3 [Shigella flexneri 2a str. 2457T]
 gi|81242764|gb|ABB63474.1| 50S ribosomal subunit protein L3 [Shigella dysenteriae Sd197]
 gi|81247094|gb|ABB67802.1| 50S ribosomal subunit protein L3 [Shigella boydii Sb227]
 gi|85676721|dbj|BAE77971.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K12 substr.
           W3110]
 gi|91074331|gb|ABE09212.1| 50S ribosomal subunit protein L3 [Escherichia coli UTI89]
 gi|110345151|gb|ABG71388.1| 50S ribosomal protein L3 [Escherichia coli 536]
 gi|110616715|gb|ABF05382.1| 50S ribosomal subunit protein L3 [Shigella flexneri 5 str. 8401]
 gi|115514722|gb|ABJ02797.1| 50S ribosomal subunit protein L3 [Escherichia coli APEC O1]
 gi|157068474|gb|ABV07729.1| ribosomal protein L3 [Escherichia coli HS]
 gi|157078636|gb|ABV18344.1| ribosomal protein L3 [Escherichia coli E24377A]
 gi|169753372|gb|ACA76071.1| ribosomal protein L3 [Escherichia coli ATCC 8739]
 gi|169890674|gb|ACB04381.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12
           substr. DH10B]
 gi|170518037|gb|ACB16215.1| ribosomal protein L3 [Escherichia coli SMS-3-5]
 gi|187430669|gb|ACD09943.1| ribosomal protein L3 [Shigella boydii CDC 3083-94]
 gi|188013518|gb|EDU51640.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4113]
 gi|188490342|gb|EDU65445.1| ribosomal protein L3 [Escherichia coli 53638]
 gi|189359274|gb|EDU77693.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4401]
 gi|189361771|gb|EDU80190.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4486]
 gi|189374499|gb|EDU92915.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC869]
 gi|190908143|gb|EDV67734.1| ribosomal protein L3 [Escherichia coli F11]
 gi|208726287|gb|EDZ75888.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4206]
 gi|208733387|gb|EDZ82074.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4045]
 gi|208738455|gb|EDZ86137.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4042]
 gi|209160382|gb|ACI37815.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4115]
 gi|209757038|gb|ACI76831.1| 50S ribosomal subunit protein L3 [Escherichia coli]
 gi|209757040|gb|ACI76832.1| 50S ribosomal subunit protein L3 [Escherichia coli]
 gi|209757042|gb|ACI76833.1| 50S ribosomal subunit protein L3 [Escherichia coli]
 gi|209757044|gb|ACI76834.1| 50S ribosomal subunit protein L3 [Escherichia coli]
 gi|209757046|gb|ACI76835.1| 50S ribosomal subunit protein L3 [Escherichia coli]
 gi|209914045|dbj|BAG79119.1| 50S ribosomal protein L3 [Escherichia coli SE11]
 gi|215266692|emb|CAS11131.1| 50S ribosomal subunit protein L3 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217321934|gb|EEC30358.1| ribosomal protein L3 [Escherichia coli O157:H7 str. TW14588]
 gi|218353744|emb|CAV00038.1| 50S ribosomal subunit protein L3 [Escherichia coli 55989]
 gi|218358136|emb|CAQ90783.1| 50S ribosomal subunit protein L3 [Escherichia fergusonii ATCC
           35469]
 gi|218362645|emb|CAR00271.1| 50S ribosomal subunit protein L3 [Escherichia coli IAI1]
 gi|218367150|emb|CAR04924.1| 50S ribosomal subunit protein L3 [Escherichia coli S88]
 gi|218372068|emb|CAR19928.1| 50S ribosomal subunit protein L3 [Escherichia coli IAI39]
 gi|218429170|emb|CAR09978.1| 50S ribosomal subunit protein L3 [Escherichia coli ED1a]
 gi|218434024|emb|CAR14941.1| 50S ribosomal subunit protein L3 [Escherichia coli UMN026]
 gi|222035029|emb|CAP77772.1| 50S ribosomal protein L3 [Escherichia coli LF82]
 gi|226838987|gb|EEH71010.1| 50S ribosomal protein L3 [Escherichia sp. 1_1_43]
 gi|226902314|gb|EEH88573.1| ribosomal protein L3 [Escherichia sp. 3_2_53FAA]
 gi|227839595|gb|EEJ50061.1| 50S ribosomal protein L3 [Escherichia coli 83972]
 gi|238859868|gb|ACR61866.1| 50S ribosomal subunit protein L3 [Escherichia coli BW2952]
 gi|242378847|emb|CAQ33639.1| 50S ribosomal subunit protein L3, subunit of 50S ribosomal subunit
           and ribosome [Escherichia coli BL21(DE3)]
 gi|253322900|gb|ACT27502.1| ribosomal protein L3 [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253975149|gb|ACT40820.1| 50S ribosomal protein L3 [Escherichia coli B str. REL606]
 gi|253979305|gb|ACT44975.1| 50S ribosomal protein L3 [Escherichia coli BL21(DE3)]
 gi|254594657|gb|ACT74018.1| 50S ribosomal subunit protein L3 [Escherichia coli O157:H7 str.
           TW14359]
 gi|257756090|dbj|BAI27592.1| 50S ribosomal subunit protein L3 [Escherichia coli O26:H11 str.
           11368]
 gi|257761265|dbj|BAI32762.1| 50S ribosomal subunit protein L3 [Escherichia coli O103:H2 str.
           12009]
 gi|257766419|dbj|BAI37914.1| 50S ribosomal subunit protein L3 [Escherichia coli O111:H- str.
           11128]
 gi|260447661|gb|ACX38083.1| ribosomal protein L3 [Escherichia coli DH1]
 gi|281180355|dbj|BAI56685.1| 50S ribosomal protein L3 [Escherichia coli SE15]
 gi|281602685|gb|ADA75669.1| 50S ribosomal protein L3 [Shigella flexneri 2002017]
 gi|290764551|gb|ADD58512.1| 50S ribosomal protein L3 [Escherichia coli O55:H7 str. CB9615]
 gi|291321764|gb|EFE61195.1| 50S ribosomal protein L3 [Escherichia coli B088]
 gi|291425728|gb|EFE98762.1| 50S ribosomal protein L3 [Escherichia coli FVEC1412]
 gi|291431313|gb|EFF04298.1| 50S ribosomal protein L3 [Escherichia coli B185]
 gi|291468386|gb|EFF10879.1| 50S ribosomal protein L3 [Escherichia coli B354]
 gi|294489959|gb|ADE88715.1| ribosomal protein L3 [Escherichia coli IHE3034]
 gi|298276493|gb|EFI18011.1| 50S ribosomal protein L3 [Escherichia coli FVEC1302]
 gi|299881660|gb|EFI89871.1| 50S ribosomal protein L3 [Escherichia coli MS 196-1]
 gi|300301917|gb|EFJ58302.1| 50S ribosomal protein L3 [Escherichia coli MS 185-1]
 gi|300309009|gb|EFJ63529.1| 50S ribosomal protein L3 [Escherichia coli MS 200-1]
 gi|300318234|gb|EFJ68018.1| 50S ribosomal protein L3 [Escherichia coli MS 175-1]
 gi|300359499|gb|EFJ75369.1| 50S ribosomal protein L3 [Escherichia coli MS 198-1]
 gi|300399526|gb|EFJ83064.1| 50S ribosomal protein L3 [Escherichia coli MS 69-1]
 gi|300404441|gb|EFJ87979.1| 50S ribosomal protein L3 [Escherichia coli MS 84-1]
 gi|300409402|gb|EFJ92940.1| 50S ribosomal protein L3 [Escherichia coli MS 45-1]
 gi|300414554|gb|EFJ97864.1| 50S ribosomal protein L3 [Escherichia coli MS 115-1]
 gi|300421719|gb|EFK05030.1| 50S ribosomal protein L3 [Escherichia coli MS 182-1]
 gi|300453788|gb|EFK17408.1| 50S ribosomal protein L3 [Escherichia coli MS 116-1]
 gi|300459474|gb|EFK22967.1| 50S ribosomal protein L3 [Escherichia coli MS 21-1]
 gi|300460037|gb|EFK23530.1| 50S ribosomal protein L3 [Escherichia coli MS 187-1]
 gi|300524643|gb|EFK45712.1| 50S ribosomal protein L3 [Escherichia coli MS 119-7]
 gi|300532362|gb|EFK53424.1| 50S ribosomal protein L3 [Escherichia coli MS 107-1]
 gi|300839224|gb|EFK66984.1| 50S ribosomal protein L3 [Escherichia coli MS 124-1]
 gi|300847992|gb|EFK75752.1| 50S ribosomal protein L3 [Escherichia coli MS 78-1]
 gi|301077763|gb|EFK92569.1| 50S ribosomal protein L3 [Escherichia coli MS 146-1]
 gi|305850733|gb|EFM51190.1| 50S ribosomal protein L3 [Escherichia coli NC101]
 gi|306905450|gb|EFN35985.1| 50S ribosomal protein L3 [Escherichia coli W]
 gi|307555407|gb|ADN48182.1| 50S ribosomal subunit protein L3 [Escherichia coli ABU 83972]
 gi|308121645|gb|EFO58907.1| 50S ribosomal protein L3 [Escherichia coli MS 145-7]
 gi|308926762|gb|EFP72238.1| ribosomal L3 family protein [Shigella dysenteriae 1617]
 gi|309703732|emb|CBJ03073.1| 50S ribosomal subunit protein L3 [Escherichia coli ETEC H10407]
 gi|310334796|gb|EFQ01001.1| ribosomal L3 family protein [Escherichia coli 1827-70]
 gi|312287180|gb|EFR15090.1| ribosomal L3 family protein [Escherichia coli 2362-75]
 gi|312947871|gb|ADR28698.1| 50S ribosomal protein L3 [Escherichia coli O83:H1 str. NRG 857C]
 gi|313647370|gb|EFS11822.1| ribosomal L3 family protein [Shigella flexneri 2a str. 2457T]
 gi|315062612|gb|ADT76939.1| 50S ribosomal subunit protein L3 [Escherichia coli W]
 gi|315137895|dbj|BAJ45054.1| 50S ribosomal protein L3 [Escherichia coli DH1]
 gi|315255903|gb|EFU35871.1| 50S ribosomal protein L3 [Escherichia coli MS 85-1]
 gi|315284605|gb|EFU44050.1| 50S ribosomal protein L3 [Escherichia coli MS 110-3]
 gi|315292363|gb|EFU51715.1| 50S ribosomal protein L3 [Escherichia coli MS 153-1]
 gi|315298618|gb|EFU57873.1| 50S ribosomal protein L3 [Escherichia coli MS 16-3]
 gi|315616997|gb|EFU97609.1| ribosomal L3 family protein [Escherichia coli 3431]
 gi|320173961|gb|EFW49137.1| LSU ribosomal protein L3p (L3e) [Shigella dysenteriae CDC 74-1112]
 gi|320180154|gb|EFW55093.1| LSU ribosomal protein L3p (L3e) [Shigella boydii ATCC 9905]
 gi|320187038|gb|EFW61750.1| LSU ribosomal protein L3p (L3e) [Shigella flexneri CDC 796-83]
 gi|320191649|gb|EFW66299.1| LSU ribosomal protein L3p (L3e) [Escherichia coli O157:H7 str.
           EC1212]
 gi|320639625|gb|EFX09219.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 str. G5101]
 gi|320645123|gb|EFX14139.1| 50S ribosomal protein L3 [Escherichia coli O157:H- str. 493-89]
 gi|320650434|gb|EFX18900.1| 50S ribosomal protein L3 [Escherichia coli O157:H- str. H 2687]
 gi|320655959|gb|EFX23879.1| 50S ribosomal protein L3 [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320661411|gb|EFX28826.1| 50S ribosomal protein L3 [Escherichia coli O55:H7 str. USDA 5905]
 gi|320666433|gb|EFX33416.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 str. LSU-61]
 gi|323154158|gb|EFZ40361.1| ribosomal L3 family protein [Escherichia coli EPECa14]
 gi|323162999|gb|EFZ48834.1| ribosomal protein L3 family protein [Escherichia coli E128010]
 gi|323179144|gb|EFZ64718.1| ribosomal protein L3 family protein [Escherichia coli 1180]
 gi|323182798|gb|EFZ68199.1| ribosomal protein L3 family protein [Escherichia coli 1357]
 gi|323189075|gb|EFZ74359.1| ribosomal protein L3 family protein [Escherichia coli RN587/1]
 gi|323376801|gb|ADX49069.1| 50S ribosomal protein L3 [Escherichia coli KO11]
 gi|323934482|gb|EGB30890.1| 50S ribosomal protein L3 [Escherichia coli E1520]
 gi|323939258|gb|EGB35470.1| 50S ribosomal protein L3 [Escherichia coli E482]
 gi|323944259|gb|EGB40335.1| 50S ribosomal protein L3 [Escherichia coli H120]
 gi|323950234|gb|EGB46116.1| 50S ribosomal protein L3 [Escherichia coli H252]
 gi|323954557|gb|EGB50340.1| 50S ribosomal protein L3 [Escherichia coli H263]
 gi|323959529|gb|EGB55182.1| 50S ribosomal protein L3 [Escherichia coli H489]
 gi|323970124|gb|EGB65398.1| 50S ribosomal protein L3 [Escherichia coli TA007]
 gi|323974727|gb|EGB69840.1| 50S ribosomal protein L3 [Escherichia coli TW10509]
 gi|324009011|gb|EGB78230.1| 50S ribosomal protein L3 [Escherichia coli MS 57-2]
 gi|324014936|gb|EGB84155.1| 50S ribosomal protein L3 [Escherichia coli MS 60-1]
 gi|324017862|gb|EGB87081.1| 50S ribosomal protein L3 [Escherichia coli MS 117-3]
 gi|324111999|gb|EGC05978.1| 50S ribosomal protein L3 [Escherichia fergusonii B253]
 gi|324116290|gb|EGC10210.1| 50S ribosomal protein L3 [Escherichia coli E1167]
 gi|325498885|gb|EGC96744.1| 50S ribosomal protein L3 [Escherichia fergusonii ECD227]
 gi|326344552|gb|EGD68301.1| LSU ribosomal protein L3p (L3e) [Escherichia coli O157:H7 str.
           1125]
 gi|327250968|gb|EGE62661.1| ribosomal protein L3 family protein [Escherichia coli STEC_7v]
 gi|330909362|gb|EGH37876.1| LSU ribosomal protein L3p (L3e) [Escherichia coli AA86]
 gi|331036310|gb|EGI08536.1| 50S ribosomal protein L3 [Escherichia coli H736]
 gi|331041615|gb|EGI13759.1| 50S ribosomal protein L3 [Escherichia coli M605]
 gi|331046928|gb|EGI19006.1| 50S ribosomal protein L3 [Escherichia coli M718]
 gi|331052825|gb|EGI24858.1| 50S ribosomal protein L3 [Escherichia coli TA206]
 gi|331057443|gb|EGI29429.1| 50S ribosomal protein L3 [Escherichia coli TA143]
 gi|331062211|gb|EGI34131.1| 50S ribosomal protein L3 [Escherichia coli TA271]
 gi|331072561|gb|EGI43886.1| 50S ribosomal protein L3 [Escherichia coli H591]
 gi|331077333|gb|EGI48545.1| 50S ribosomal protein L3 [Escherichia coli H299]
 gi|332085471|gb|EGI90637.1| ribosomal protein L3 family protein [Shigella boydii 5216-82]
 gi|332086009|gb|EGI91173.1| ribosomal protein L3 family protein [Shigella dysenteriae 155-74]
 gi|332090310|gb|EGI95408.1| ribosomal protein L3 family protein [Shigella boydii 3594-74]
 gi|332104227|gb|EGJ07573.1| 50S ribosomal subunit protein L3 [Shigella sp. D9]
 gi|223116|prf||0509226A protein L3
          Length = 209

 Score =  265 bits (678), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|52078609|ref|YP_077400.1| 50S ribosomal protein L3 [Bacillus licheniformis ATCC 14580]
 gi|52783971|ref|YP_089800.1| 50S ribosomal protein L3 [Bacillus licheniformis ATCC 14580]
 gi|319649116|ref|ZP_08003324.1| 50S ribosomal protein L3 [Bacillus sp. BT1B_CT2]
 gi|81825438|sp|Q65PA7|RL3_BACLD RecName: Full=50S ribosomal protein L3
 gi|52001820|gb|AAU21762.1| ribosomal protein L3 (BL3) [Bacillus licheniformis ATCC 14580]
 gi|52346473|gb|AAU39107.1| RplC [Bacillus licheniformis ATCC 14580]
 gi|317388816|gb|EFV69635.1| 50S ribosomal protein L3 [Bacillus sp. BT1B_CT2]
          Length = 209

 Score =  265 bits (678), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 93/212 (43%), Positives = 128/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTSENDGYEAIQIGFDDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    +PK+ + E R   D D   VG       F+ G++VDVTG + GKGF
Sbjct: 61  ANKPEKGHVAKAETAPKRFVKELRGV-DMDAYEVGQEVKVDIFSNGEIVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH       +HG S  HR  GS G   DP RVFK K + GRMGG ++TV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPV-DPNRVFKGKLLPGRMGGEQITVQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGAKK S + V+ + KS
Sbjct: 178 KVDAERNLLLVKGNVPGAKK-SLVTVKSAVKS 208


>gi|254501408|ref|ZP_05113559.1| ribosomal protein L3 [Labrenzia alexandrii DFL-11]
 gi|222437479|gb|EEE44158.1| ribosomal protein L3 [Labrenzia alexandrii DFL-11]
          Length = 232

 Score =  265 bits (678), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 125/211 (59%), Positives = 157/211 (74%), Gaps = 2/211 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++A+K+GMT +YN  G  +PVTVL L+NCQVV HRT +KNGY A+Q+GAG  KVKN  K 
Sbjct: 1   MIAQKVGMTRIYNDAGEHVPVTVLRLENCQVVAHRTDEKNGYNALQLGAGTRKVKNTPKA 60

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           +RG F+   V PK+ + EFRV  + +++ VG+  +  ++  GQ VDVTG +IGKGF+G M
Sbjct: 61  LRGHFAVAKVEPKRTVVEFRVSAE-NMIDVGAEITADHYVEGQFVDVTGTSIGKGFAGVM 119

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHNFGG RA+HG SISHRSHGSTG  QDPGRVFK KKMAG MG  RVT +NL+VV  D 
Sbjct: 120 KRHNFGGGRASHGNSISHRSHGSTGQCQDPGRVFKGKKMAGHMGDARVTTQNLKVVRTDV 179

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           +RGLI+V+G VPGA K  WI VRD+ K A+ 
Sbjct: 180 ERGLIMVEGSVPGA-KGGWIQVRDAIKKALP 209


>gi|311277725|ref|YP_003939956.1| 50S ribosomal protein L3 [Enterobacter cloacae SCF1]
 gi|308746920|gb|ADO46672.1| 50S ribosomal protein L3 [Enterobacter cloacae SCF1]
          Length = 209

 Score =  265 bits (678), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 93/210 (44%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K   V+
Sbjct: 2   IGLIGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFAEVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|293602635|ref|ZP_06685078.1| 50S ribosomal protein L3 [Achromobacter piechaudii ATCC 43553]
 gi|292819007|gb|EFF78045.1| 50S ribosomal protein L3 [Achromobacter piechaudii ATCC 43553]
          Length = 233

 Score =  265 bits (678), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 99/216 (45%), Positives = 132/216 (61%), Gaps = 3/216 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+V RK+GMT ++  EG  IPVTVL + N +V   ++L+ +GY A+QV  G  +   V
Sbjct: 16  RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQVKSLETDGYAAIQVAYGTRRASRV 75

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119
           ++P  G ++         L EFR+          GSV +    F  GQ VDVTG TIGKG
Sbjct: 76  AQPQTGHYAKAGTEAGSILKEFRLDPARAAEFAAGSVIAVESVFEAGQQVDVTGTTIGKG 135

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRH+FG  RA+HG S SHR  GS G  QDPGR+F  K+MAG +G    TV+NL+V
Sbjct: 136 FAGTIKRHHFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMAGHLGDVTRTVQNLDV 195

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           V VD +RGL+LVKG VPG    + I+VR + K+   
Sbjct: 196 VRVDVERGLLLVKGAVPG-HAGADIVVRPAIKAPAK 230


>gi|319407426|emb|CBI81077.1| 50S ribosomal protein L3 [Bartonella sp. 1-1C]
          Length = 254

 Score =  265 bits (677), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 133/219 (60%), Positives = 162/219 (73%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT +YN  G  +PVTVL LD CQV+  RT++KNGY AVQ+G G AK+KN
Sbjct: 9   MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLDKCQVIAQRTVEKNGYTAVQLGVGFAKIKN 68

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK +RG F+   V PK K+ EFRV  D +LL VG+  +  +F  GQ VDVTG++IGKGF
Sbjct: 69  TSKALRGHFAKAVVEPKAKIAEFRVSPD-NLLDVGTEITVEHFVPGQRVDVTGVSIGKGF 127

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HR+HGSTG  QDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 128 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGRVRVTTQNIEVV 187

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           S D  RGLILV+G V G+ K SWILVRD+ K  +     
Sbjct: 188 STDVDRGLILVRGSVSGS-KGSWILVRDAVKRRLPSNAP 225


>gi|123444098|ref|YP_001008068.1| 50S ribosomal protein L3 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|238752687|ref|ZP_04614158.1| 50S ribosomal protein L3 [Yersinia rohdei ATCC 43380]
 gi|238783169|ref|ZP_04627195.1| 50S ribosomal protein L3 [Yersinia bercovieri ATCC 43970]
 gi|238788910|ref|ZP_04632700.1| 50S ribosomal protein L3 [Yersinia frederiksenii ATCC 33641]
 gi|238797238|ref|ZP_04640739.1| 50S ribosomal protein L3 [Yersinia mollaretii ATCC 43969]
 gi|332163259|ref|YP_004299836.1| 50S ribosomal protein L3 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|166234608|sp|A1JS47|RL3_YERE8 RecName: Full=50S ribosomal protein L3
 gi|122091059|emb|CAL13942.1| 50S ribosomal protein L3 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|238709114|gb|EEQ01361.1| 50S ribosomal protein L3 [Yersinia rohdei ATCC 43380]
 gi|238715965|gb|EEQ07951.1| 50S ribosomal protein L3 [Yersinia bercovieri ATCC 43970]
 gi|238718875|gb|EEQ10690.1| 50S ribosomal protein L3 [Yersinia mollaretii ATCC 43969]
 gi|238722937|gb|EEQ14587.1| 50S ribosomal protein L3 [Yersinia frederiksenii ATCC 33641]
 gi|318607744|emb|CBY29242.1| LSU ribosomal protein L3p (L3e) [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325667489|gb|ADZ44133.1| 50S ribosomal protein L3 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330861855|emb|CBX72026.1| 50S ribosomal protein L3 [Yersinia enterocolitica W22703]
          Length = 209

 Score =  265 bits (677), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 94/210 (44%), Positives = 131/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   ++L+ +GY AVQV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYRAVQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+ +  +    G   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLPEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG +G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   + I V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGATGGNLI-VKPAVKA 209


>gi|118443770|ref|YP_877198.1| 50S ribosomal protein L3 [Clostridium novyi NT]
 gi|166233135|sp|A0PXU6|RL3_CLONN RecName: Full=50S ribosomal protein L3
 gi|118134226|gb|ABK61270.1| ribosomal protein L3 [Clostridium novyi NT]
          Length = 209

 Score =  265 bits (677), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 86/212 (40%), Positives = 130/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ RK+GMT +++  G+ IPVTV+    C V+  +T +K+GY A+QVG  + + K 
Sbjct: 1   MKKAIIGRKIGMTQIFDENGKVIPVTVVEAGPCAVLQKKTEEKDGYNAIQVGFEDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G F+   VS K+ + EFR++  D+   VG+      F  G  VDVTG++ GKGF
Sbjct: 61  ANKPKKGHFAKAGVSLKRIVREFRLENIDE-YEVGTEIKADVFAAGDKVDVTGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF      HG S  HR+ GS G   DP R FKNKKM G MG  + T+ N+EVV
Sbjct: 120 QGTIKRWNFHRGPMAHG-SKYHRAVGSMGAASDPSRTFKNKKMPGHMGNKKSTILNIEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V   + ++L+KG +PG  K  +++++D+ K+
Sbjct: 179 KVMADKNVLLIKGGIPGPNKG-YVVIKDTVKA 209


>gi|325293336|ref|YP_004279200.1| 50S ribosomal protein L3 [Agrobacterium sp. H13-3]
 gi|325061189|gb|ADY64880.1| 50S ribosomal protein L3 [Agrobacterium sp. H13-3]
          Length = 213

 Score =  265 bits (677), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 139/215 (64%), Positives = 170/215 (79%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  IPVTVL +DN QVV  RT DKNGY AVQ+GAG++KVKN
Sbjct: 1   MRSGVIAQKVGMTRVYNDAGEHIPVTVLRMDNVQVVSQRTEDKNGYTAVQLGAGQSKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +K +RG F++ NV PK KL EFRV  + +L+ +G+  + ++F  GQLVDVTG TIGKGF
Sbjct: 61  TTKALRGHFAAANVEPKAKLVEFRVSPE-NLIDIGATLTATHFQAGQLVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGG RA+HG S+SHR+HGSTG  QDPGRV+K K+MAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRHNFGGGRASHGNSVSHRAHGSTGNNQDPGRVWKGKRMAGHMGQTRVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           S D+ RGLILVKG VPG+ K +WI+VRD+ KSA  
Sbjct: 180 STDEDRGLILVKGAVPGS-KGAWIIVRDAVKSAAK 213


>gi|24371829|ref|NP_715871.1| 50S ribosomal protein L3 [Shewanella oneidensis MR-1]
 gi|113968544|ref|YP_732337.1| 50S ribosomal protein L3 [Shewanella sp. MR-4]
 gi|114045707|ref|YP_736257.1| 50S ribosomal protein L3 [Shewanella sp. MR-7]
 gi|117918657|ref|YP_867849.1| 50S ribosomal protein L3 [Shewanella sp. ANA-3]
 gi|42559642|sp|Q8EK68|RL3_SHEON RecName: Full=50S ribosomal protein L3
 gi|122945060|sp|Q0I0A5|RL3_SHESR RecName: Full=50S ribosomal protein L3
 gi|123325489|sp|Q0HNT7|RL3_SHESM RecName: Full=50S ribosomal protein L3
 gi|166234595|sp|A0KRM4|RL3_SHESA RecName: Full=50S ribosomal protein L3
 gi|24345642|gb|AAN53316.1|AE015473_3 ribosomal protein L3 [Shewanella oneidensis MR-1]
 gi|113883228|gb|ABI37280.1| LSU ribosomal protein L3P [Shewanella sp. MR-4]
 gi|113887149|gb|ABI41200.1| LSU ribosomal protein L3P [Shewanella sp. MR-7]
 gi|117610989|gb|ABK46443.1| LSU ribosomal protein L3P [Shewanella sp. ANA-3]
          Length = 212

 Score =  265 bits (677), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 93/213 (43%), Positives = 130/213 (61%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  IPVTV+ +   +V   +TL+ +GY A+QV  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFTEDGVSIPVTVIEVAGNRVTQVKTLETDGYRALQVTTGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++KP  G F+   V   + L+E R+   + + + VG+  +   F     VDVTG + GKG
Sbjct: 61  ITKPEAGHFAKSGVEAGRGLWELRLADGEGEGIEVGAELNVGIFADVAKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF     THG S+SHRS+GS G  Q PGRVFK KKM+G MG  RVT +NL+V
Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LVKG VPGA     I ++ + K+
Sbjct: 181 VRVDVERNLLLVKGAVPGATNGDLI-IKPAVKA 212


>gi|238754175|ref|ZP_04615533.1| 50S ribosomal protein L3 [Yersinia ruckeri ATCC 29473]
 gi|238707671|gb|EEQ00031.1| 50S ribosomal protein L3 [Yersinia ruckeri ATCC 29473]
          Length = 209

 Score =  265 bits (677), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 94/210 (44%), Positives = 131/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   ++L+ +GY AVQV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYRAVQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+ +  +    G   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLAEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG +G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   + I V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGATGGNLI-VKPAVKA 209


>gi|110800321|ref|YP_697094.1| 50S ribosomal protein L3 [Clostridium perfringens ATCC 13124]
 gi|161485641|ref|NP_563321.2| 50S ribosomal protein L3 [Clostridium perfringens str. 13]
 gi|182626914|ref|ZP_02954647.1| ribosomal protein L3 [Clostridium perfringens D str. JGS1721]
 gi|42559666|sp|Q8XHS3|RL3_CLOPE RecName: Full=50S ribosomal protein L3
 gi|123049583|sp|Q0TMP6|RL3_CLOP1 RecName: Full=50S ribosomal protein L3
 gi|110674968|gb|ABG83955.1| 50S ribosomal protein L3 [Clostridium perfringens ATCC 13124]
 gi|177907704|gb|EDT70319.1| ribosomal protein L3 [Clostridium perfringens D str. JGS1721]
          Length = 209

 Score =  265 bits (677), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 89/212 (41%), Positives = 129/212 (60%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT +++  GR IPVTV+    C VV  +T++ +GY A+QVG GE + K 
Sbjct: 1   MKKAIIGKKVGMTQIFDENGRVIPVTVVEAGPCVVVQKKTVETDGYDAIQVGFGELREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G F+   VS ++ L EFR  +D     VG       F +G  VDV+G++ GKGF
Sbjct: 61  VNKPRKGHFAKAGVSLRRTLKEFR-MEDVANYNVGDEIKVDTFEIGDKVDVSGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR N      +HG S  HR+ GS G   DP R FKNK+M G MG    TV NLEVV
Sbjct: 120 QGTIKRWNASRGPMSHG-SKFHRAPGSMGAASDPSRTFKNKRMPGHMGAKNTTVLNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  ++ +IL+KG +PG  K + + +R+S K+
Sbjct: 179 KIMPEKNIILIKGGIPGPNKGTVV-IRNSVKA 209


>gi|323706450|ref|ZP_08118011.1| 50S ribosomal protein L3 [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323534170|gb|EGB23960.1| 50S ribosomal protein L3 [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 209

 Score =  265 bits (677), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 94/212 (44%), Positives = 129/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K GMT ++ +    IPVTV+    C VV  +T + +GY A+QVG G+ K K 
Sbjct: 1   MKKAILGKKHGMTQIF-VGNEMIPVTVVEAGPCVVVQKKTKENDGYDAIQVGFGDVKEKR 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + KP++G F+  NV  KK L EFR+  D     VGS      F+VG  VDV G + GKGF
Sbjct: 60  LIKPLKGHFAKANVPFKKYLREFRLD-DISSYEVGSEIKADIFSVGDRVDVIGTSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR+N       HG S  HR  GS G   DP R FK K++ G MG  RVT++NLEVV
Sbjct: 119 AGVVKRYNANRGPMAHG-SKYHRRPGSMGASSDPSRTFKGKRLPGHMGNERVTIQNLEVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD ++ L+L+KG VPG  K S +++RD+ KS
Sbjct: 178 KVDPEKNLLLIKGSVPGV-KGSLLMIRDTVKS 208


>gi|149376686|ref|ZP_01894445.1| 50S ribosomal protein L3 [Marinobacter algicola DG893]
 gi|149359059|gb|EDM47524.1| 50S ribosomal protein L3 [Marinobacter algicola DG893]
          Length = 212

 Score =  265 bits (677), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 89/213 (41%), Positives = 134/213 (62%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++  +G+ + VTV+ ++  ++   +TL+ +GY AVQV  G+ +   
Sbjct: 1   MAIGIVGRKAGMTRIFTEDGQAVSVTVIEVEPNRITQLKTLESDGYRAVQVTVGKRRSSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G ++   V   + L+EFR+   + + L  G   + S F  GQ+VD  G + GKG
Sbjct: 61  VTKSEAGHYAKAGVEAGRGLWEFRLADGEGEELAAGGEITASIFEDGQVVDAVGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG+MG  +VTV+NL+V
Sbjct: 121 FQGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQMGNAQVTVQNLQV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+L++G VPGA   + + ++ + K+
Sbjct: 181 VRVDAERNLLLIRGAVPGATGGNVV-IKPAVKA 212


>gi|308047991|ref|YP_003911557.1| 50S ribosomal protein L3P [Ferrimonas balearica DSM 9799]
 gi|307630181|gb|ADN74483.1| LSU ribosomal protein L3P [Ferrimonas balearica DSM 9799]
          Length = 212

 Score =  265 bits (677), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 96/213 (45%), Positives = 130/213 (61%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTV+ ++  +V   +TLD +GY A+QV AG  K   
Sbjct: 1   MAIGLVGRKVGMTRIFTPEGVSIPVTVIEVEPNRVTQVKTLDTDGYSALQVTAGAKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV-FSPSYFTVGQLVDVTGMTIGKG 119
           V+KP  G F+   V   +  +EFR+ + +              FT    VDVTG + GKG
Sbjct: 61  VTKPEAGHFAKAGVEAGRGTWEFRLGEGEGEGIELGAELKVDIFTDVAKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F GA+KR NF     THG S+SHR+ GS G  Q PG+VFK KKMAG MG  RVT +NL+V
Sbjct: 121 FQGAIKRWNFRSQDMTHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGHMGAERVTTQNLDV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LVKG +PGA   + ++V+ + K+
Sbjct: 181 VRVDVERNLLLVKGAIPGANGGN-VIVKPAVKA 212


>gi|307628355|gb|ADN72659.1| 50S ribosomal protein L3 [Escherichia coli UM146]
          Length = 209

 Score =  265 bits (677), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 94/210 (44%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+V+ V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVIRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|146313385|ref|YP_001178459.1| 50S ribosomal protein L3 [Enterobacter sp. 638]
 gi|166990936|sp|A4WFC8|RL3_ENT38 RecName: Full=50S ribosomal protein L3
 gi|145320261|gb|ABP62408.1| LSU ribosomal protein L3P [Enterobacter sp. 638]
          Length = 209

 Score =  265 bits (677), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 96/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGSKKASRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQDISVELFAEVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSNLIVKPAVKA 209


>gi|224110272|ref|XP_002315468.1| predicted protein [Populus trichocarpa]
 gi|222864508|gb|EEF01639.1| predicted protein [Populus trichocarpa]
          Length = 320

 Score =  265 bits (677), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 106/209 (50%), Positives = 143/209 (68%), Gaps = 2/209 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GV+A K GMT +++  G RIP+TVL +D+  V   +T++K G+ A+QVG G+ K K++
Sbjct: 74  RTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTVEKEGFFALQVGCGQKKEKHL 133

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F +  V  K+KL EF V ++  LLPVG+     +F  GQ VDV G+T+GKGF 
Sbjct: 134 TKPEVGHFRAQGVPMKRKLREFPVTEN-ALLPVGTCIGVRHFVPGQFVDVAGITMGKGFQ 192

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F G  A+HG S+SHRS GSTG R  PG+VFK KKM GRMGG + TVKN+ V  
Sbjct: 193 GGMKRHGFKGGPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGVQRTVKNVWVYK 252

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           +D  R L+ VKG VPGA+ N ++ ++DS 
Sbjct: 253 IDPARNLMWVKGQVPGAEGN-FVFIKDSV 280


>gi|237749515|ref|ZP_04579995.1| large subunit ribosomal protein L3 [Oxalobacter formigenes OXCC13]
 gi|229380877|gb|EEO30968.1| large subunit ribosomal protein L3 [Oxalobacter formigenes OXCC13]
          Length = 222

 Score =  265 bits (677), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 94/216 (43%), Positives = 132/216 (61%), Gaps = 2/216 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GM  ++  EG  IPVTV+ + + +V   +T + +GY AVQV  G+ +   
Sbjct: 5   MSLGLIGRKVGMMRIFTDEGDSIPVTVVDVSDNRVTQVKTTETDGYTAVQVAFGKRRPSR 64

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V     L EF V +     +  G V   + F  GQ +DV G++IGKG
Sbjct: 65  VNKAAAGHFAKAGVEAGTVLREFTVDESKAAEVKAGDVLPATMFEAGQKIDVQGVSIGKG 124

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KRHNF   RATHG S+SH   GS G  QDPGRVF  KKM G MG    T++NLE+
Sbjct: 125 YAGTIKRHNFASGRATHGNSLSHNVPGSIGMNQDPGRVFPGKKMTGHMGDVTKTIQNLEI 184

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             +D +R L+LVKG VPGA KN+ ++VR + K+ V+
Sbjct: 185 ARIDAERNLLLVKGAVPGA-KNAEVIVRPAVKTKVS 219


>gi|329850207|ref|ZP_08265052.1| 50S ribosomal protein L3 [Asticcacaulis biprosthecum C19]
 gi|328840522|gb|EGF90093.1| 50S ribosomal protein L3 [Asticcacaulis biprosthecum C19]
          Length = 242

 Score =  264 bits (676), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 122/219 (55%), Positives = 155/219 (70%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+KLGMT  ++ EG  +PVTVL LD CQVV  RT  K+GY+A+Q+GAG  K KN
Sbjct: 1   MRTGLIAKKLGMTRFFDSEGLHVPVTVLALDGCQVVAQRTQGKDGYVALQLGAGTKKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S P R  F+   V PK  L EFRV ++ +L+ VG+ F+  +F  GQ VD+ G+TIGKGF
Sbjct: 61  TSNPERVRFAKAQVEPKAILTEFRVSEE-NLIDVGAEFTADHFVEGQRVDIQGVTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F  KKMAG  G   VT  NL V 
Sbjct: 120 AGAMKRWNFGGLRATHGVSVSHRSHGSTGQRQDPGRTFPGKKMAGHYGVETVTTLNLTVA 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            +D +RGL+ ++G VPGA+  S++ +RD+ K A     K
Sbjct: 180 RIDAERGLVFIRGAVPGAE-GSYVKIRDAVKKAAPAGLK 217


>gi|15603280|ref|NP_246354.1| 50S ribosomal protein L3 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|42559689|sp|Q9CL32|RL3_PASMU RecName: Full=50S ribosomal protein L3
 gi|12721790|gb|AAK03499.1| RpL3 [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 209

 Score =  264 bits (676), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 96/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V RK+GMT ++N +G  IPVTV+ ++  +V   +T++ +GY A+QV  G  K   V+
Sbjct: 2   IGLVGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTVETDGYSAIQVTTGSKKASRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V   + L+EFR  + ++   +G   +   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFVKAGVEAGRGLWEFRTTEGEEFT-LGQEINVDIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV V
Sbjct: 121 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGNERVTVQSLEVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA  N  ++V+ + K+
Sbjct: 181 DAERKLLLVKGAVPGA-TNGDVIVKPAVKA 209


>gi|118616571|ref|YP_904903.1| 50S ribosomal protein L3 [Mycobacterium ulcerans Agy99]
 gi|166233167|sp|A0PM63|RL3_MYCUA RecName: Full=50S ribosomal protein L3
 gi|118568681|gb|ABL03432.1| 50S ribosomal protein L3 RplC [Mycobacterium ulcerans Agy99]
          Length = 217

 Score =  264 bits (676), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 88/214 (41%), Positives = 125/214 (58%), Gaps = 3/214 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   + +PVTV+      V   RT +++GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP+ G +++  V+P++ L E R+   +      VG   +   F  G  VDVTG + GKG
Sbjct: 63  NKPVTGQYTAAGVNPRRHLAELRLDDAEAVTEYEVGQELTAEIFADGSYVDVTGTSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKRH F G  A+HG    HR  GS G    P RVFK  +MAGRMG +RVTV+NL V
Sbjct: 123 FAGTMKRHGFSGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             VD ++ ++L+KG VPG +    + VR + K  
Sbjct: 183 HKVDAEQSVLLIKGAVPG-RTGGLVTVRSAIKRG 215


>gi|313884599|ref|ZP_07818360.1| 50S ribosomal protein L3 [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620383|gb|EFR31811.1| 50S ribosomal protein L3 [Eremococcus coleocola ACS-139-V-Col8]
          Length = 210

 Score =  264 bits (676), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 84/212 (39%), Positives = 122/212 (57%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT  +   G  IPVTV+      V+  ++L+ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGKKVGMTQYFTENGELIPVTVVEATPNVVLQVKSLENDGYEAVQLGYQDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EFR   +     VG   +   F  G ++DVTG + GKGF
Sbjct: 61  ATKPHKGHVAKANATPKRFIREFR-NVELGSFEVGQEITVETFEAGDIIDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G   D  +VFK K + G+ GG +VT++NLEVV
Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGMASDASKVFKGKNLPGQTGGEQVTIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +V  +  LIL+KG VPG KK S + +R + KS
Sbjct: 179 AVVAEDNLILIKGNVPGPKK-SLVEIRTAVKS 209


>gi|238916265|ref|YP_002929782.1| large subunit ribosomal protein L3 [Eubacterium eligens ATCC 27750]
 gi|259647745|sp|C4Z2T0|RL3_EUBE2 RecName: Full=50S ribosomal protein L3
 gi|238871625|gb|ACR71335.1| large subunit ribosomal protein L3 [Eubacterium eligens ATCC 27750]
          Length = 211

 Score =  264 bits (676), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 89/213 (41%), Positives = 123/213 (57%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G   PVTVL    C V   +T++ +GY AVQVG  + + K 
Sbjct: 1   MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTVENDGYDAVQVGFADIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F    V  K+ L EF+ +   +   V        F  G  VD T ++ GKGF
Sbjct: 61  VNKPVKGHFDKAEVPYKRFLREFKFENASE-YSVKDEIKADIFAAGDKVDATAISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR         HG S  HR  GS G    PGRVFK K M G MG  R+T++NLEVV
Sbjct: 120 QGAIKRLGQSRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGHMGSKRITIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            VD +  +ILVKG VPG KK S + ++++ K+A
Sbjct: 179 RVDVENNVILVKGAVPGPKK-SLVTLKETVKAA 210


>gi|163859273|ref|YP_001633571.1| 50S ribosomal protein L3 [Bordetella petrii DSM 12804]
 gi|212288248|sp|A9IJ01|RL3_BORPD RecName: Full=50S ribosomal protein L3
 gi|163263001|emb|CAP45304.1| 50S ribosomal protein L3 [Bordetella petrii]
          Length = 233

 Score =  264 bits (676), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 97/216 (44%), Positives = 131/216 (60%), Gaps = 3/216 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+V RK+GMT ++  EG  IPVTVL + N +V   ++L+ +GY AVQV  G  +   V
Sbjct: 16  RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQIKSLEADGYAAVQVAYGTRRASRV 75

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119
           ++P  G ++         L EFR+          G+V +    F  GQ VDVTG TIGKG
Sbjct: 76  AQPQTGHYAKAGTEAGSILKEFRLDPARLAEFTPGAVIAVESVFEAGQQVDVTGTTIGKG 135

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRH+FG  RA+HG S SHR  GS G  QDPGR+F  K+M+G +G    TV+NL+V
Sbjct: 136 FAGTIKRHHFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMSGHLGDVTRTVQNLDV 195

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           V VD +RGL+LVKG VPG      ++VR + K+   
Sbjct: 196 VRVDAERGLLLVKGAVPG-HAGGDVVVRPAIKAPAK 230


>gi|260468554|ref|ZP_05813721.1| ribosomal protein L3 [Mesorhizobium opportunistum WSM2075]
 gi|259028710|gb|EEW30019.1| ribosomal protein L3 [Mesorhizobium opportunistum WSM2075]
          Length = 237

 Score =  264 bits (676), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 129/219 (58%), Positives = 163/219 (74%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT +YN  G  +PVTVL ++NCQVV  RT +KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAKKVGMTRIYNDAGEHVPVTVLQMENCQVVAQRTQEKNGYTAVQLGVGLAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK +RG F++ +V PK K+ EFRV  D +++ VG+  +  +F  GQ VDVTG TIGKGF
Sbjct: 61  TSKALRGHFATASVEPKAKVAEFRVSAD-NMIDVGAEITVEHFVAGQKVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH+ GG RATHG S+SHR+HGSTG RQDPG+VFK K MAG MG  RVT +N+E+V
Sbjct: 120 QGVIKRHHMGGGRATHGNSVSHRTHGSTGQRQDPGKVFKGKHMAGHMGDTRVTTQNVEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           S D  RGLIL++G VPG+ K +WILVRD+ K A+     
Sbjct: 180 STDADRGLILIRGAVPGS-KGAWILVRDAAKVALPANAP 217


>gi|183981053|ref|YP_001849344.1| 50S ribosomal protein L3 RplC [Mycobacterium marinum M]
 gi|226730539|sp|B2HSN1|RL3_MYCMM RecName: Full=50S ribosomal protein L3
 gi|183174379|gb|ACC39489.1| 50S ribosomal protein L3 RplC [Mycobacterium marinum M]
          Length = 217

 Score =  264 bits (676), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 89/214 (41%), Positives = 127/214 (59%), Gaps = 3/214 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   + +PVTV+      V   RT +++GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP+ G +++  V+P++ L E R+   +      VG   +   F  G  VDVTG + GKG
Sbjct: 63  NKPVTGQYTAAGVNPRRHLAELRLDDAEAVTEYEVGQELTAEIFADGSYVDVTGTSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKRH F G  A+HG    HR  GS G    P RVFK  +MAGRMG +RVTV+NL V
Sbjct: 123 FAGTMKRHGFSGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             VD ++G++L+KG VPG +    ++VR + K  
Sbjct: 183 HKVDAEQGVLLIKGAVPG-RTGGLVMVRSAIKRG 215


>gi|238758764|ref|ZP_04619938.1| 50S ribosomal protein L3 [Yersinia aldovae ATCC 35236]
 gi|238703061|gb|EEP95604.1| 50S ribosomal protein L3 [Yersinia aldovae ATCC 35236]
          Length = 209

 Score =  264 bits (676), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 129/210 (61%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTTGSKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+ +  +    G   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLAEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG MG  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHMGDERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   + I V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGATGGNLI-VKPAVKA 209


>gi|256025952|ref|ZP_05439817.1| 50S ribosomal protein L3 [Escherichia sp. 4_1_40B]
          Length = 209

 Score =  264 bits (676), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLTNDGYRAIQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|330430101|gb|AEC21435.1| 50S ribosomal protein L3 [Pusillimonas sp. T7-7]
          Length = 229

 Score =  264 bits (676), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 100/216 (46%), Positives = 135/216 (62%), Gaps = 3/216 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+V RK+GMT ++  EG  IPVTVL + N +V   ++ + +GY AVQV  G  +   V
Sbjct: 12  RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQVKSPETDGYAAVQVAYGTRRASRV 71

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119
           +KP  G ++         L EFR+          G+V +    F  GQ VDVTG TIGKG
Sbjct: 72  TKPQAGHYAKAGAEAGSILKEFRLDPAKAAEFTAGAVVAVESVFEAGQKVDVTGTTIGKG 131

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KRH+F G R +HG S+SHR+ GSTG  QDPGRVF  KKM+G +G    TV+NL++
Sbjct: 132 YAGTIKRHHFAGQRNSHGNSVSHRAPGSTGMAQDPGRVFPGKKMSGHLGDATRTVQNLDI 191

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           V VD +RGL+LVKG VPG  KN+ I+VR + K +  
Sbjct: 192 VRVDAERGLLLVKGAVPG-HKNADIVVRPAIKMSAK 226


>gi|120402316|ref|YP_952145.1| 50S ribosomal protein L3 [Mycobacterium vanbaalenii PYR-1]
 gi|166233168|sp|A1T4N9|RL3_MYCVP RecName: Full=50S ribosomal protein L3
 gi|119955134|gb|ABM12139.1| LSU ribosomal protein L3P [Mycobacterium vanbaalenii PYR-1]
          Length = 218

 Score =  264 bits (675), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 87/217 (40%), Positives = 127/217 (58%), Gaps = 3/217 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   + +PVTV+      V   RT +++GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP+ G +++  V+P++ L E R+  +       VG   +   F  G  VDVTG + GKG
Sbjct: 63  NKPVTGQYAAAGVNPRRHLAELRLDDEAAAAEYEVGQELTAEIFADGAYVDVTGTSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKRH F G  A+HG    HR  GS G    PGRVFK  +M+GRMG +RVT +NL+V
Sbjct: 123 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGSDRVTTQNLKV 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
             VD + G++L+KG +PG +    ++VR + K     
Sbjct: 183 HKVDAENGVLLIKGAIPG-RNGGLVVVRSAIKRGEKA 218


>gi|41410259|ref|NP_963095.1| 50S ribosomal protein L3 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118463063|ref|YP_883606.1| 50S ribosomal protein L3 [Mycobacterium avium 104]
 gi|254776907|ref|ZP_05218423.1| 50S ribosomal protein L3 [Mycobacterium avium subsp. avium ATCC
           25291]
 gi|81831570|sp|Q73SB3|RL3_MYCPA RecName: Full=50S ribosomal protein L3
 gi|166233161|sp|A0QL18|RL3_MYCA1 RecName: Full=50S ribosomal protein L3
 gi|41399093|gb|AAS06711.1| RplC [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118164350|gb|ABK65247.1| ribosomal protein L3 [Mycobacterium avium 104]
          Length = 217

 Score =  264 bits (675), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 91/214 (42%), Positives = 127/214 (59%), Gaps = 3/214 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   R +PVTV+      V   RT +++GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTPEQDGYSAVQLAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP+ G +++  ++P++ L E R+   D      VG   +   FT G  VDVTG + GKG
Sbjct: 63  NKPVTGQYAAAGINPRRFLAELRLDNPDAAAEYQVGQELTAEIFTDGSYVDVTGTSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKRH F G  A+HG    HR  GS G    P RVFK  +MAGRMG +RVTV+NL V
Sbjct: 123 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             VD + G++L+KG VPG +    ++VR + K  
Sbjct: 183 HKVDTENGVLLIKGAVPG-RTGGLVMVRSAVKRG 215


>gi|317401537|gb|EFV82166.1| 50S ribosomal protein L3 [Achromobacter xylosoxidans C54]
          Length = 229

 Score =  264 bits (675), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 98/216 (45%), Positives = 130/216 (60%), Gaps = 3/216 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+V RK+GMT ++  EG  IPVTVL + N +V   ++L+ +GY A+QV  G  +   V
Sbjct: 12  RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQVKSLETDGYAAIQVAYGTRRASRV 71

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119
            +   G ++         L EFR+          G+V +    F  GQ VDVTG TIGKG
Sbjct: 72  PQAQTGHYAKAGAEAGSILKEFRLDPARAAEFSAGAVIAVESVFEAGQQVDVTGTTIGKG 131

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRHNFG  RA+HG S SHR  GS G  QDPGR+F  K+MAG +G    TV+NL+V
Sbjct: 132 FAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMAGHLGDVTRTVQNLDV 191

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           V VD +RGL+LVKG VPG    + I+VR + K+   
Sbjct: 192 VRVDVERGLLLVKGAVPG-HAGADIVVRPAIKAPAK 226


>gi|304399291|ref|ZP_07381157.1| 50S ribosomal protein L3 [Pantoea sp. aB]
 gi|308188357|ref|YP_003932488.1| 50S ribosomal protein L3 [Pantoea vagans C9-1]
 gi|304353217|gb|EFM17598.1| 50S ribosomal protein L3 [Pantoea sp. aB]
 gi|308058867|gb|ADO11039.1| 50S ribosomal protein L3 [Pantoea vagans C9-1]
          Length = 209

 Score =  264 bits (675), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 94/210 (44%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L+ +GY A+QV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKGLENDGYQAIQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR  + ++   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRTAEGEE-YSVGQSISVEIFAEVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|308376477|ref|ZP_07438983.2| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu008]
 gi|308350981|gb|EFP39832.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu008]
          Length = 221

 Score =  264 bits (675), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 91/214 (42%), Positives = 125/214 (58%), Gaps = 3/214 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   R +PVTV+      V   RT +++GY AVQ+  GE   + V
Sbjct: 7   RKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP+ G +++  V+P++ L E R+   D      VG   +   F  G  VDVTG + GKG
Sbjct: 67  NKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKG 126

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKRH F G  A+HG    HR  GS G    P RVFK  +MAGRMG +RVTV NL V
Sbjct: 127 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLV 186

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             VD + G++L+KG VPG +    ++VR + K  
Sbjct: 187 HKVDAENGVLLIKGAVPG-RTGGLVMVRSAIKRG 219


>gi|113869431|ref|YP_727920.1| 50S ribosomal protein L3 [Ralstonia eutropha H16]
 gi|194291022|ref|YP_002006929.1| 50S ribosomal protein l3 [Cupriavidus taiwanensis LMG 19424]
 gi|123133539|sp|Q0K619|RL3_RALEH RecName: Full=50S ribosomal protein L3
 gi|226725158|sp|B3R7S3|RL3_CUPTR RecName: Full=50S ribosomal protein L3
 gi|113528207|emb|CAJ94552.1| LSU ribosomal protein L3 [Ralstonia eutropha H16]
 gi|193224857|emb|CAQ70868.1| 50S ribosomal subunit protein L3 [Cupriavidus taiwanensis LMG
           19424]
          Length = 216

 Score =  264 bits (675), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 90/217 (41%), Positives = 129/217 (59%), Gaps = 2/217 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+ + + +V   +T + +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTDDGEAIPVTVVEVGDNRVTQIKTDETDGYTAVQVTFGARRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + + EFR+       L  G   S   F VGQ +DV G+TIGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEIIREFRIDAAKAAELQAGGSLSVDLFEVGQKIDVQGVTIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR++F   RATHG S SH   GS G  QDPGRVF  K+M G +G    TV+NLE+
Sbjct: 121 YAGTIKRYHFASGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTRTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
             +D +R L+LVKG +PG+ KN  ++V  + K+    
Sbjct: 181 AKIDAERKLLLVKGAIPGS-KNGKVIVTPAVKAKAKA 216


>gi|52426103|ref|YP_089240.1| 50S ribosomal protein L3 [Mannheimia succiniciproducens MBEL55E]
 gi|81825476|sp|Q65QV5|RL3_MANSM RecName: Full=50S ribosomal protein L3
 gi|52308155|gb|AAU38655.1| RplC protein [Mannheimia succiniciproducens MBEL55E]
          Length = 208

 Score =  264 bits (675), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 99/210 (47%), Positives = 131/210 (62%), Gaps = 3/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V RK+GMT ++  EG  IPVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+
Sbjct: 2   IGLVGRKVGMTRIFTEEGVSIPVTVIEIEANRVTQVKTLENDGYSAVQVTTGSKKASRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V   + L+EFR +   +   +G   +   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFVKAGVEAGRGLWEFRTEG--EEFTLGQEINVDIFADVKKVDVTGTSKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV V
Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA  NS ++V+ + K+
Sbjct: 180 DAERKLLLVKGAVPGA-TNSDVIVKPAVKA 208


>gi|152978141|ref|YP_001343770.1| 50S ribosomal protein L3 [Actinobacillus succinogenes 130Z]
 gi|171472958|sp|A6VLI8|RL3_ACTSZ RecName: Full=50S ribosomal protein L3
 gi|150839864|gb|ABR73835.1| ribosomal protein L3 [Actinobacillus succinogenes 130Z]
          Length = 208

 Score =  264 bits (675), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 99/210 (47%), Positives = 131/210 (62%), Gaps = 3/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+
Sbjct: 2   IGLVGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKASRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V   + L+EFR +   +   +G   +   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFVKAGVEAGRGLWEFRTEG--EEFTLGQEINVDIFADVKKVDVTGTSKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV V
Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA  NS ++V+ + K+
Sbjct: 180 DAERKLLLVKGAVPGA-TNSDVIVKPAVKA 208


>gi|284923326|emb|CBG36420.1| 50S ribosomal subunit protein L3 [Escherichia coli 042]
          Length = 209

 Score =  264 bits (675), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 134/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K  +V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANSVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|227505216|ref|ZP_03935265.1| 50S ribosomal protein L3 [Corynebacterium striatum ATCC 6940]
 gi|227198190|gb|EEI78238.1| 50S ribosomal protein L3 [Corynebacterium striatum ATCC 6940]
          Length = 218

 Score =  264 bits (675), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 82/214 (38%), Positives = 121/214 (56%), Gaps = 2/214 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +KLGMT +++ + R +PVTV+    C V   RT + +GY A+Q+  GE   +  +
Sbjct: 7   KGILGKKLGMTQIFDEDNRVVPVTVVEAGPCVVTQIRTAETDGYNAIQIAFGEIDPRKAN 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P++ + E R+  D     VG   +   F     VDVTG T G G++G
Sbjct: 67  KPAAGHFKKAGVTPRRHVAEIRMD-DTSAYEVGQEVTADIFEGITFVDVTGTTKGHGYAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRH F G  A HG   +HR  G  G    P RVFK  +MAGRMG +RVT +NL++  +
Sbjct: 126 AMKRHGFAGQGAAHGNQAAHRRVGGIGACATPARVFKGTRMAGRMGQDRVTTQNLKIQKI 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           D +  L+L+KG +PGA +   + V+ + K   + 
Sbjct: 186 DAESNLLLIKGAIPGA-RGGLVTVKTAVKGGAHA 218


>gi|229825321|ref|ZP_04451390.1| hypothetical protein GCWU000182_00675 [Abiotrophia defectiva ATCC
           49176]
 gi|229790693|gb|EEP26807.1| hypothetical protein GCWU000182_00675 [Abiotrophia defectiva ATCC
           49176]
          Length = 211

 Score =  264 bits (675), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 91/211 (43%), Positives = 126/211 (59%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++  +G  IPVTVL  D   V   +T++ +GY AVQVG G+ +   
Sbjct: 1   MKKAILATKIGMTQIFAEDGSLIPVTVLKADPAVVTQVKTVENDGYSAVQVGFGDIRENL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G F+   V  K+ L EF++ +D +    G       F  G  VD T  + GKGF
Sbjct: 61  VNKPKKGHFAKAGVPVKRFLREFKL-EDAENYKAGDEIKSDVFAAGDKVDATATSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+ RH        HG S  HR  GS G   DP +VFK KKMAG MG  +VTV+NLEVV
Sbjct: 120 QGAIHRHGLHRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKKMAGHMGHVKVTVQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD ++ LILVKG VPGAKK + ++++ + +
Sbjct: 179 RVDAEKNLILVKGAVPGAKK-ALVMLKSTTR 208


>gi|74313839|ref|YP_312258.1| 50S ribosomal protein L3 [Shigella sonnei Ss046]
 gi|109893556|sp|Q3YWT9|RL3_SHISS RecName: Full=50S ribosomal protein L3
 gi|73857316|gb|AAZ90023.1| 50S ribosomal subunit protein L3 [Shigella sonnei Ss046]
          Length = 209

 Score =  264 bits (675), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 132/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K GMT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K   V+
Sbjct: 2   IGLVGKKAGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFAEVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|212274775|ref|NP_001130722.1| hypothetical protein LOC100191826 [Zea mays]
 gi|195627984|gb|ACG35822.1| 50S ribosomal protein L3-2 [Zea mays]
          Length = 318

 Score =  264 bits (675), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 104/209 (49%), Positives = 145/209 (69%), Gaps = 2/209 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GV+  K GM+ +++  G ++P+TVL +D+  V   +T +K G+ A+Q+GAG+ K K++
Sbjct: 71  RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVTQVKTAEKEGFFALQLGAGQKKEKHL 130

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F +  V  K+KL EF V +D  LLPVG+  +  +F  GQ VDVTG+T GKGF+
Sbjct: 131 TKPEVGHFRAQGVPLKRKLREFPVTED-ALLPVGTSITVRHFVPGQFVDVTGITKGKGFA 189

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR+ FGG  A+HG S++HRS GSTG R  PGRVFKN+KM GRMGG + TVKN+ V  
Sbjct: 190 GVMKRYGFGGXPASHGTSLAHRSGGSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 249

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           +D  R L+ +KG VPG +  S+I V+DS 
Sbjct: 250 IDPARNLLYLKGQVPGPQ-GSFIFVKDSI 277


>gi|255067458|ref|ZP_05319313.1| 50S ribosomal protein L3 [Neisseria sicca ATCC 29256]
 gi|255048253|gb|EET43717.1| 50S ribosomal protein L3 [Neisseria sicca ATCC 29256]
          Length = 238

 Score =  264 bits (675), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 25  MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 84

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++    L  G   + S F VGQLVDVTG + GKG
Sbjct: 85  VNKAEAGHFAKAGVEAGRGLIEFALAEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 144

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 145 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 204

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPGA  NS ++VR S K
Sbjct: 205 VRVDAERQLLLVKGAVPGAV-NSDVVVRPSVK 235


>gi|294638052|ref|ZP_06716312.1| 50S ribosomal protein L3 [Edwardsiella tarda ATCC 23685]
 gi|291088844|gb|EFE21405.1| 50S ribosomal protein L3 [Edwardsiella tarda ATCC 23685]
          Length = 209

 Score =  264 bits (675), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 94/210 (44%), Positives = 131/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + LD +GY A+QV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLDNDGYRAIQVTTGSKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L EFR+ + ++   +G   S   F   + VDVTG++ GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRVLREFRLSEGEEFT-IGQNISVEIFADVKKVDVTGISKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG +G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA     I V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGATGGDLI-VKPAVKA 209


>gi|78044555|ref|YP_361118.1| 50S ribosomal protein L3 [Carboxydothermus hydrogenoformans Z-2901]
 gi|109893418|sp|Q3A9R6|RL3_CARHZ RecName: Full=50S ribosomal protein L3
 gi|77996670|gb|ABB15569.1| ribosomal protein L3 [Carboxydothermus hydrogenoformans Z-2901]
          Length = 209

 Score =  264 bits (675), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 94/212 (44%), Positives = 134/212 (63%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +GR IPVTV+    C VV  +T+  +GY A+Q+G GE K   
Sbjct: 1   MPKGILGRKVGMTQIFTEDGRAIPVTVIEAGPCVVVQKKTIANDGYNAIQLGFGEIKESK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F+  NV P + L E RV+  D    VG       FTVG+ VDVTG++ GKGF
Sbjct: 61  VNKPLKGHFNRANVKPMRYLREIRVENIDA-YEVGQEIKVDIFTVGEKVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH F      HG S  HR  GS G +  P RVF  +K+ GR+G  RVT++NLEVV
Sbjct: 120 AGGIKRHGFHRGPMAHG-SKYHRRPGSLGAKG-PARVFLGRKLPGRLGMERVTIQNLEVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+++KG VPG  + S ++++++ K 
Sbjct: 178 KVDPERNLLVIKGSVPG-IRGSLLIIKEAVKG 208


>gi|160941069|ref|ZP_02088407.1| hypothetical protein CLOBOL_05962 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436018|gb|EDP13785.1| hypothetical protein CLOBOL_05962 [Clostridium bolteae ATCC
           BAA-613]
          Length = 226

 Score =  264 bits (675), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 89/211 (42%), Positives = 121/211 (57%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N  G  +PVTVL    C V   +T + +GY AVQVG  + + K 
Sbjct: 16  MKKAILATKVGMTQIFNENGALVPVTVLQAGPCVVTQVKTAENDGYKAVQVGFVDKRDKL 75

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKP +G F    VS K+ + EF+ +  ++   V        F  G  +D T ++ GKGF
Sbjct: 76  VSKPQKGHFDKAGVSYKRYVREFKFENAEE-YSVKDEIKADIFAAGDKIDATAISKGKGF 134

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR+        HG S  HR  GS G    PGRVFK K M G MG  ++TV+NLEVV
Sbjct: 135 QGAIKRYGQHRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGHMGSKQITVQNLEVV 193

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD    LILVKG VPG KK S + ++++ K
Sbjct: 194 KVDVDNNLILVKGAVPGPKK-SLVTIKETVK 223


>gi|50843318|ref|YP_056545.1| 50S ribosomal protein L3 [Propionibacterium acnes KPA171202]
 gi|289427657|ref|ZP_06429369.1| 50S ribosomal protein L3 [Propionibacterium acnes J165]
 gi|295131387|ref|YP_003582050.1| 50S ribosomal protein L3 [Propionibacterium acnes SK137]
 gi|81826389|sp|Q6A6M6|RL3_PROAC RecName: Full=50S ribosomal protein L3
 gi|50840920|gb|AAT83587.1| 50S ribosomal protein L3 [Propionibacterium acnes KPA171202]
 gi|289159148|gb|EFD07340.1| 50S ribosomal protein L3 [Propionibacterium acnes J165]
 gi|291377388|gb|ADE01243.1| 50S ribosomal protein L3 [Propionibacterium acnes SK137]
 gi|313773097|gb|EFS39063.1| 50S ribosomal protein L3 [Propionibacterium acnes HL074PA1]
 gi|313808839|gb|EFS47293.1| 50S ribosomal protein L3 [Propionibacterium acnes HL087PA2]
 gi|313810367|gb|EFS48081.1| 50S ribosomal protein L3 [Propionibacterium acnes HL083PA1]
 gi|313812297|gb|EFS50011.1| 50S ribosomal protein L3 [Propionibacterium acnes HL025PA1]
 gi|313818019|gb|EFS55733.1| 50S ribosomal protein L3 [Propionibacterium acnes HL046PA2]
 gi|313819932|gb|EFS57646.1| 50S ribosomal protein L3 [Propionibacterium acnes HL036PA1]
 gi|313823422|gb|EFS61136.1| 50S ribosomal protein L3 [Propionibacterium acnes HL036PA2]
 gi|313824894|gb|EFS62608.1| 50S ribosomal protein L3 [Propionibacterium acnes HL063PA1]
 gi|313830136|gb|EFS67850.1| 50S ribosomal protein L3 [Propionibacterium acnes HL007PA1]
 gi|313832593|gb|EFS70307.1| 50S ribosomal protein L3 [Propionibacterium acnes HL056PA1]
 gi|314925788|gb|EFS89619.1| 50S ribosomal protein L3 [Propionibacterium acnes HL036PA3]
 gi|314960868|gb|EFT04969.1| 50S ribosomal protein L3 [Propionibacterium acnes HL002PA2]
 gi|314973015|gb|EFT17111.1| 50S ribosomal protein L3 [Propionibacterium acnes HL053PA1]
 gi|314975511|gb|EFT19606.1| 50S ribosomal protein L3 [Propionibacterium acnes HL045PA1]
 gi|314979747|gb|EFT23841.1| 50S ribosomal protein L3 [Propionibacterium acnes HL072PA2]
 gi|314986053|gb|EFT30145.1| 50S ribosomal protein L3 [Propionibacterium acnes HL005PA2]
 gi|314988669|gb|EFT32760.1| 50S ribosomal protein L3 [Propionibacterium acnes HL005PA3]
 gi|315079850|gb|EFT51826.1| 50S ribosomal protein L3 [Propionibacterium acnes HL078PA1]
 gi|315083218|gb|EFT55194.1| 50S ribosomal protein L3 [Propionibacterium acnes HL027PA2]
 gi|315086828|gb|EFT58804.1| 50S ribosomal protein L3 [Propionibacterium acnes HL002PA3]
 gi|315089921|gb|EFT61897.1| 50S ribosomal protein L3 [Propionibacterium acnes HL072PA1]
 gi|315096757|gb|EFT68733.1| 50S ribosomal protein L3 [Propionibacterium acnes HL038PA1]
 gi|315106073|gb|EFT78049.1| 50S ribosomal protein L3 [Propionibacterium acnes HL030PA1]
 gi|327325171|gb|EGE66977.1| 50S ribosomal protein L3 [Propionibacterium acnes HL096PA3]
 gi|327325199|gb|EGE67004.1| 50S ribosomal protein L3 [Propionibacterium acnes HL096PA2]
 gi|327444000|gb|EGE90654.1| 50S ribosomal protein L3 [Propionibacterium acnes HL043PA1]
 gi|327449372|gb|EGE96026.1| 50S ribosomal protein L3 [Propionibacterium acnes HL013PA2]
 gi|327449400|gb|EGE96054.1| 50S ribosomal protein L3 [Propionibacterium acnes HL043PA2]
 gi|328756283|gb|EGF69899.1| 50S ribosomal protein L3 [Propionibacterium acnes HL020PA1]
 gi|328761383|gb|EGF74910.1| 50S ribosomal protein L3 [Propionibacterium acnes HL099PA1]
          Length = 223

 Score =  264 bits (675), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 102/213 (47%), Positives = 131/213 (61%), Gaps = 2/213 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            GV+  KLGMT +++   R +PVTV+    C V   RT + +GY AVQ+G G  K KNV+
Sbjct: 8   KGVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKNVT 67

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P++ L E R   D     +G   +   F+    VDVTG + GKG +G
Sbjct: 68  KPEAGHFEKAGVTPRRHLVELR-TADASEYTLGQEIAADVFSESDFVDVTGTSKGKGTAG 126

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGGLRATHGV   HRS GS G    PG+V K  +MAGRMG  RVTV+NL+V SV
Sbjct: 127 VMKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQNLQVHSV 186

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           D +RG++LV+G VPG  K S ++VR + K A  
Sbjct: 187 DAERGIMLVRGAVPGP-KGSLLVVRSAAKKAAK 218


>gi|257866529|ref|ZP_05646182.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC30]
 gi|257870517|ref|ZP_05650170.1| 50S ribosomal protein L3 [Enterococcus gallinarum EG2]
 gi|257872956|ref|ZP_05652609.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC10]
 gi|257876133|ref|ZP_05655786.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC20]
 gi|325567376|ref|ZP_08144043.1| 50S ribosomal protein L3 [Enterococcus casseliflavus ATCC 12755]
 gi|257800487|gb|EEV29515.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC30]
 gi|257804681|gb|EEV33503.1| 50S ribosomal protein L3 [Enterococcus gallinarum EG2]
 gi|257807120|gb|EEV35942.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC10]
 gi|257810299|gb|EEV39119.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC20]
 gi|325158809|gb|EGC70955.1| 50S ribosomal protein L3 [Enterococcus casseliflavus ATCC 12755]
          Length = 209

 Score =  263 bits (674), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 90/212 (42%), Positives = 131/212 (61%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY A+QVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQVKTIENDGYEAIQVGYQDMREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF+   + + L VGS      F  G ++DVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREFK-NVELEGLEVGSEIKVDIFEAGDIIDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK++AGRMGGNR+T++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRITIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R +IL+KG VPGAKK S I ++ + K+
Sbjct: 178 RVDAERNVILIKGNVPGAKK-SLITIKSAVKA 208


>gi|254362074|ref|ZP_04978199.1| ribosomal protein L3 [Mannheimia haemolytica PHL213]
 gi|261493009|ref|ZP_05989551.1| ribosomal protein L3 [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261495171|ref|ZP_05991634.1| ribosomal protein L3 [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|153093630|gb|EDN74595.1| ribosomal protein L3 [Mannheimia haemolytica PHL213]
 gi|261309147|gb|EEY10387.1| ribosomal protein L3 [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261311353|gb|EEY12514.1| ribosomal protein L3 [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 209

 Score =  263 bits (674), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 97/210 (46%), Positives = 132/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   V+
Sbjct: 2   IGLIGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDGYSAIQVTTGSKKASRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V   + L+EFR  + ++   +G   +   FT  + VDVTG + GKGF G
Sbjct: 62  KPEAGHFVKAGVEAGRGLWEFRTTEGEEFT-LGQEINVDIFTDVKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV V
Sbjct: 121 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA  N  ++V+ + K+
Sbjct: 181 DVERKLLLVKGAVPGA-TNGDVIVKPAVKA 209


>gi|289424800|ref|ZP_06426582.1| 50S ribosomal protein L3 [Propionibacterium acnes SK187]
 gi|289154763|gb|EFD03446.1| 50S ribosomal protein L3 [Propionibacterium acnes SK187]
 gi|313763238|gb|EFS34602.1| 50S ribosomal protein L3 [Propionibacterium acnes HL013PA1]
 gi|313793258|gb|EFS41316.1| 50S ribosomal protein L3 [Propionibacterium acnes HL110PA1]
 gi|313801098|gb|EFS42366.1| 50S ribosomal protein L3 [Propionibacterium acnes HL110PA2]
 gi|313828364|gb|EFS66078.1| 50S ribosomal protein L3 [Propionibacterium acnes HL063PA2]
 gi|313837949|gb|EFS75663.1| 50S ribosomal protein L3 [Propionibacterium acnes HL086PA1]
 gi|314914332|gb|EFS78163.1| 50S ribosomal protein L3 [Propionibacterium acnes HL005PA4]
 gi|314917652|gb|EFS81483.1| 50S ribosomal protein L3 [Propionibacterium acnes HL050PA1]
 gi|314919616|gb|EFS83447.1| 50S ribosomal protein L3 [Propionibacterium acnes HL050PA3]
 gi|314930207|gb|EFS94038.1| 50S ribosomal protein L3 [Propionibacterium acnes HL067PA1]
 gi|314957186|gb|EFT01290.1| 50S ribosomal protein L3 [Propionibacterium acnes HL027PA1]
 gi|314957762|gb|EFT01865.1| 50S ribosomal protein L3 [Propionibacterium acnes HL002PA1]
 gi|314963542|gb|EFT07642.1| 50S ribosomal protein L3 [Propionibacterium acnes HL082PA1]
 gi|314969875|gb|EFT13973.1| 50S ribosomal protein L3 [Propionibacterium acnes HL037PA1]
 gi|315077165|gb|EFT49232.1| 50S ribosomal protein L3 [Propionibacterium acnes HL053PA2]
 gi|315100628|gb|EFT72604.1| 50S ribosomal protein L3 [Propionibacterium acnes HL046PA1]
 gi|315109232|gb|EFT81208.1| 50S ribosomal protein L3 [Propionibacterium acnes HL030PA2]
 gi|327451421|gb|EGE98075.1| 50S ribosomal protein L3 [Propionibacterium acnes HL087PA3]
 gi|327451604|gb|EGE98258.1| 50S ribosomal protein L3 [Propionibacterium acnes HL092PA1]
 gi|327451891|gb|EGE98545.1| 50S ribosomal protein L3 [Propionibacterium acnes HL083PA2]
 gi|328752105|gb|EGF65721.1| 50S ribosomal protein L3 [Propionibacterium acnes HL087PA1]
 gi|328755499|gb|EGF69115.1| 50S ribosomal protein L3 [Propionibacterium acnes HL025PA2]
          Length = 223

 Score =  263 bits (674), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 101/213 (47%), Positives = 130/213 (61%), Gaps = 2/213 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            GV+  KLGMT +++   R +PVTV+    C V   RT + +GY AVQ+G G  K KNV+
Sbjct: 8   KGVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKNVT 67

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P++ L E R   D     +G   +   F+    VDVT  + GKG +G
Sbjct: 68  KPEAGHFEKAGVTPRRHLVELR-TADASEYTLGQEIAADVFSESDFVDVTATSKGKGTAG 126

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGGLRATHGV   HRS GS G    PG+V K  +MAGRMG  RVTV+NL+V SV
Sbjct: 127 VMKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQNLQVHSV 186

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           D +RG++LV+G VPG  K S ++VR + K A  
Sbjct: 187 DAERGIMLVRGAVPGP-KGSLLVVRSAAKKAAK 218


>gi|304315940|ref|YP_003851085.1| 50S ribosomal protein L3 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777442|gb|ADL68001.1| 50S ribosomal protein L3 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 209

 Score =  263 bits (674), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 94/212 (44%), Positives = 129/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K GMT ++ +    IPVTV+    C VV  +T + +GY A+QVG G+ K K 
Sbjct: 1   MKKAILGKKHGMTQIF-VGNEMIPVTVVEAGPCVVVQKKTKENDGYDAIQVGFGDVKEKR 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + KP++G F+  NV  KK L EFR+  D     VGS      F+VG  VDV G + GKGF
Sbjct: 60  LIKPLKGHFTKANVPFKKYLREFRLD-DISSYEVGSEIKADIFSVGDRVDVIGTSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR+N       HG S  HR  GS G   DP R FK K++ G MG  RVTV+NLEVV
Sbjct: 119 AGVVKRYNANRGPMAHG-SKYHRRPGSMGASSDPSRTFKGKRLPGHMGNERVTVQNLEVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD ++ L+L+KG VPG  + S +++RD+ KS
Sbjct: 178 KVDPEKNLLLIKGSVPG-IRGSLLMIRDTVKS 208


>gi|182678337|ref|YP_001832483.1| 50S ribosomal protein L3 [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|226725134|sp|B2IK62|RL3_BEII9 RecName: Full=50S ribosomal protein L3
 gi|182634220|gb|ACB94994.1| ribosomal protein L3 [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 240

 Score =  263 bits (674), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 139/220 (63%), Positives = 161/220 (73%), Gaps = 2/220 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT V+   G  IPVTVL LD CQVV HRT ++NGY+AVQ+G G AKVKN
Sbjct: 1   MRSGVIAQKLGMTRVFTDAGEHIPVTVLKLDGCQVVGHRTKEQNGYVAVQLGIGRAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK  RG F+   V PK KL EFRV  D  LLP+G+  +  +F VGQ VDVTG + GKGF
Sbjct: 61  VSKAERGRFAVAKVEPKLKLAEFRVD-DATLLPIGAEITADHFVVGQFVDVTGTSTGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NFGGLRATHGVSISHRSHGSTG RQDPG+ FKNKKMAG +G  RVT  NL VV
Sbjct: 120 AGAMKRWNFGGLRATHGVSISHRSHGSTGGRQDPGKTFKNKKMAGHLGTERVTTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
             D +RGLILV+G VPG     WI VRD+ K  +  +  +
Sbjct: 180 QTDVERGLILVEGAVPGTA-GGWIYVRDAVKKHLPKEAPL 218


>gi|300857246|ref|YP_003782230.1| 50S ribosomal protein L3 [Clostridium ljungdahlii DSM 13528]
 gi|300437361|gb|ADK17128.1| 50S ribosomal protein L3 [Clostridium ljungdahlii DSM 13528]
          Length = 209

 Score =  263 bits (674), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 89/212 (41%), Positives = 127/212 (59%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ RKLGMT ++N  G+ IPVTV+    C V+  +T++K+GY AVQVG  + + K 
Sbjct: 1   MKKAILGRKLGMTQIFNENGKVIPVTVIEAGPCAVIQKKTVEKDGYEAVQVGFSDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+G F    V+ K+ + EF+++   +    G       FT G  VDV+G++ GKGF
Sbjct: 61  VNKPMKGHFEKAGVTLKRFIKEFKLENASEYKE-GQEIKADVFTAGDKVDVSGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR N      +HG S  HR+ GS G   DP R FKN KMAG MG    TV NLEV 
Sbjct: 120 QGTIKRWNAQRGPMSHG-SKFHRAPGSMGACSDPSRTFKNMKMAGHMGNRNTTVLNLEVA 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ +IL+KG VPG  K   + +R++ K+
Sbjct: 179 KVIPEKNIILIKGGVPGPNKG-LVAIRNTVKA 209


>gi|117927515|ref|YP_872066.1| 50S ribosomal protein L3P [Acidothermus cellulolyticus 11B]
 gi|212288244|sp|A0LRM0|RL3_ACIC1 RecName: Full=50S ribosomal protein L3
 gi|117647978|gb|ABK52080.1| LSU ribosomal protein L3P [Acidothermus cellulolyticus 11B]
          Length = 222

 Score =  263 bits (674), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 100/219 (45%), Positives = 130/219 (59%), Gaps = 2/219 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++  GR IPVTV+    C V   RT D++GY AVQ+G G    + V+
Sbjct: 6   KGLLGEKLGMTQVFDESGRVIPVTVVRAGPCVVTQVRTPDRDGYSAVQLGYGAVDPRRVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F +  V+P++ L E R   D     VG   +   FT GQ VDV G++ GKGF+G
Sbjct: 66  KPLAGHFRAAGVTPRRYLAEVR-TGDAAEYTVGQEVTVEIFTPGQRVDVAGVSKGKGFAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF GL  +HG    HRS GS G    PGRVFK  +MAGRMGG RVTV+NL V +V
Sbjct: 125 LMKRHNFRGLPDSHGTERKHRSPGSIGACATPGRVFKGLRMAGRMGGRRVTVQNLAVQAV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
             +  L+L++G VPG      + VR + K   N  G  +
Sbjct: 185 KPEENLLLLQGAVPGPN-GGLVYVRTAAKGKANRDGGAA 222


>gi|229823535|ref|ZP_04449604.1| hypothetical protein GCWU000282_00833 [Catonella morbi ATCC 51271]
 gi|229786979|gb|EEP23093.1| hypothetical protein GCWU000282_00833 [Catonella morbi ATCC 51271]
          Length = 211

 Score =  263 bits (674), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 85/211 (40%), Positives = 124/211 (58%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT  +   G  +PVTV+      V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGKKVGMTQFFTENGELVPVTVIEATPNVVLQVKTMENDGYEAVQLGFQDLREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EFR + +     VG   +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANATPKRFIREFR-EVELGEYQVGQEITVETFAAGDIVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    P RVFK K + G+ GG RVT++NLEVV
Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGGASFPSRVFKGKGLPGQTGGERVTIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +VD +  +IL+KG VPGAKK S + ++ + K
Sbjct: 179 AVDVENNVILIKGNVPGAKK-SLVEIKQAIK 208


>gi|34499641|ref|NP_903856.1| 50S ribosomal protein L3 [Chromobacterium violaceum ATCC 12472]
 gi|42559595|sp|Q7NQF2|RL3_CHRVO RecName: Full=50S ribosomal protein L3
 gi|34105491|gb|AAQ61846.1| 50S ribosomal protein L3 [Chromobacterium violaceum ATCC 12472]
          Length = 214

 Score =  263 bits (674), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 103/215 (47%), Positives = 131/215 (60%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTVL + + +V   +T + +GY AVQV  G  K   
Sbjct: 1   MSLGLVGRKVGMTRIFAEDGATIPVTVLDMSSNRVTQIKTAETDGYNAVQVTYGSKKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V     L EF +  D       G   +   FTVGQLVDVTG + GKG
Sbjct: 61  VNKADAGHFAKAGVEAGLGLAEFALSADALSNFKPGDAIAVEIFTVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNF   RA+HG S SH + GS G  QDPGRVF  K+MAG+ G  + TV+ LE+
Sbjct: 121 FSGVIKRHNFSSNRASHGNSRSHNTPGSIGQAQDPGRVFPGKRMAGQYGNVKSTVQCLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           V VD +R LILVKG VPGA KN  ++VR S K+  
Sbjct: 181 VRVDAERQLILVKGAVPGA-KNGDVVVRPSVKAGA 214


>gi|300022541|ref|YP_003755152.1| 50S ribosomal protein L3 [Hyphomicrobium denitrificans ATCC 51888]
 gi|299524362|gb|ADJ22831.1| 50S ribosomal protein L3 [Hyphomicrobium denitrificans ATCC 51888]
          Length = 233

 Score =  263 bits (674), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 121/216 (56%), Positives = 157/216 (72%), Gaps = 2/216 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT ++   G  +PVTVL L+N QV+ HRT++KNGY A+QVG G  K   
Sbjct: 1   MRSGVIAQKVGMTRIFTDAGEHVPVTVLRLENLQVLSHRTVEKNGYTAIQVGGGTRKPSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++K  RG F+   V PK+K+ EFRV  + +L+ VG+  +  +F  GQ VDVTG T GKGF
Sbjct: 61  LTKADRGTFAKAEVEPKRKIAEFRVSPE-NLIDVGAEITADHFVPGQFVDVTGTTQGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GAMKR NFGGLRATHGVS++HR+HGSTG RQDPG+VFK KKMAG +G  RVT +NL V 
Sbjct: 120 QGAMKRWNFGGLRATHGVSVTHRAHGSTGQRQDPGKVFKGKKMAGHLGDERVTTQNLVVA 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            +D  RGL++V+G VPG+ K  W++VRD+ K A   
Sbjct: 180 KIDKARGLVMVRGAVPGS-KGGWVIVRDAVKKAAPA 214


>gi|295398288|ref|ZP_06808330.1| 50S ribosomal protein L3 [Aerococcus viridans ATCC 11563]
 gi|294973427|gb|EFG49212.1| 50S ribosomal protein L3 [Aerococcus viridans ATCC 11563]
          Length = 211

 Score =  263 bits (674), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 83/213 (38%), Positives = 123/213 (57%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT  +   G  +PVTV+      V+  +T + +GY A+QVG    +   
Sbjct: 1   MTKGILGKKVGMTQFFTETGELVPVTVIEAQPNVVLQAKTNETDGYEAIQVGFDNKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    +PK+ + EF+   +     VGS      F  G +VDVTG + GKGF
Sbjct: 61  ANKPHKGHVAKAETTPKRFIKEFK-DVELGDYEVGSEIKVDIFQAGDIVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH       +HG    HRS GS G   D  +VFK K + G+ GG ++T++NLE+V
Sbjct: 120 QGAIKRHGQSRGPMSHGSH-YHRSPGSMGMASDASKVFKGKNLPGQTGGTQITIQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            VD +R +IL+KG VPGAKK S + ++ + KSA
Sbjct: 179 KVDAERNVILIKGNVPGAKK-SMVTIKSAVKSA 210


>gi|227328949|ref|ZP_03832973.1| 50S ribosomal protein L3 [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
 gi|253690183|ref|YP_003019373.1| ribosomal protein L3 [Pectobacterium carotovorum subsp. carotovorum
           PC1]
 gi|259709730|sp|C6DG74|RL3_PECCP RecName: Full=50S ribosomal protein L3
 gi|251756761|gb|ACT14837.1| ribosomal protein L3 [Pectobacterium carotovorum subsp. carotovorum
           PC1]
          Length = 209

 Score =  263 bits (674), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 132/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L EFR+ + ++   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRTLREFRLSEGEEFT-VGQSISVEIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|115525585|ref|YP_782496.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris BisA53]
 gi|122295408|sp|Q07KL8|RL3_RHOP5 RecName: Full=50S ribosomal protein L3
 gi|115519532|gb|ABJ07516.1| LSU ribosomal protein L3P [Rhodopseudomonas palustris BisA53]
          Length = 240

 Score =  263 bits (674), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 125/219 (57%), Positives = 159/219 (72%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  IPVTVL L NCQV+ HRT +KNGY A+Q+G+G  K   
Sbjct: 1   MRSGVIAQKVGMTRVFTETGEHIPVTVLKLGNCQVLGHRTSEKNGYTALQLGSGSRKTVY 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + K  RG F++  V PK+K+ EFRV +D  ++P+G+     +F VGQ VDVTG ++GKGF
Sbjct: 61  MPKAERGQFAAAKVEPKRKVAEFRVSED-SMIPIGAEIQADHFVVGQFVDVTGTSVGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T  NL VV
Sbjct: 120 AGGIKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            +D +RGLILV+G VPG+ K  WI VRD+ K A+     
Sbjct: 180 QLDVERGLILVEGAVPGS-KGGWIAVRDAVKKALPADAP 217


>gi|15828002|ref|NP_302265.1| 50S ribosomal protein L3 [Mycobacterium leprae TN]
 gi|221230479|ref|YP_002503895.1| 50S ribosomal protein L3 [Mycobacterium leprae Br4923]
 gi|13093555|emb|CAC30817.1| 50S ribosomal protein L3 [Mycobacterium leprae]
 gi|219933586|emb|CAR71959.1| 50S ribosomal protein L3 [Mycobacterium leprae Br4923]
          Length = 218

 Score =  263 bits (674), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 93/214 (43%), Positives = 126/214 (58%), Gaps = 3/214 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   R +PVTV+      V   RTL+++GY AVQ+  GE   + V
Sbjct: 4   RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTLERDGYSAVQLAYGEISPRKV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP+ G ++S  V+P++ L E R+   D      VG   +   F     VDVTG + GKG
Sbjct: 64  NKPVTGQYNSAGVNPRRYLAELRLDHPDAAAEYEVGQELTAEIFADATYVDVTGTSKGKG 123

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG MKRH F G  A+HG    HR  GS G    P RVFK  +MAGRMG +RVTV+NL V
Sbjct: 124 FSGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 183

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             VD + G++L+KG VPG +    ++VR + K  
Sbjct: 184 HKVDTENGVLLIKGAVPG-RTGGLVMVRSAIKRG 216


>gi|13432203|sp|P30762|RL3_MYCLE RecName: Full=50S ribosomal protein L3
          Length = 217

 Score =  263 bits (674), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 93/214 (43%), Positives = 126/214 (58%), Gaps = 3/214 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   R +PVTV+      V   RTL+++GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTLERDGYSAVQLAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP+ G ++S  V+P++ L E R+   D      VG   +   F     VDVTG + GKG
Sbjct: 63  NKPVTGQYNSAGVNPRRYLAELRLDHPDAAAEYEVGQELTAEIFADATYVDVTGTSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG MKRH F G  A+HG    HR  GS G    P RVFK  +MAGRMG +RVTV+NL V
Sbjct: 123 FSGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             VD + G++L+KG VPG +    ++VR + K  
Sbjct: 183 HKVDTENGVLLIKGAVPG-RTGGLVMVRSAIKRG 215


>gi|114319619|ref|YP_741302.1| 50S ribosomal protein L3P [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312456|sp|Q0ABH5|RL3_ALHEH RecName: Full=50S ribosomal protein L3
 gi|114226013|gb|ABI55812.1| LSU ribosomal protein L3P [Alkalilimnicola ehrlichii MLHE-1]
          Length = 218

 Score =  263 bits (674), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 102/210 (48%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT V+  +G  +PVTV+     +V   RT +++GY  VQV AG  +   
Sbjct: 1   MSIGIVGRKAGMTRVFTEDGASVPVTVIEASPNRVTQVRTPERDGYSGVQVTAGSRRPNR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDD-LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           VSKPM G F++  V   + ++EFRV       L  G   +   F  GQ+VD+TG + GKG
Sbjct: 61  VSKPMAGHFAAAGVDAGRGVWEFRVSDGQAIELEAGKELTVETFEAGQVVDITGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRHNF    ATHG S++HR+ GS G  Q PGRVFK KKMAG+MG  R TVKNLEV
Sbjct: 121 FAGTVKRHNFRTQDATHGNSLAHRAPGSIGQNQTPGRVFKGKKMAGQMGNKRSTVKNLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           V VD +R L+LV+G VPGA   S ++VR +
Sbjct: 181 VRVDAERHLLLVRGSVPGAV-GSDVIVRPA 209


>gi|313816574|gb|EFS54288.1| 50S ribosomal protein L3 [Propionibacterium acnes HL059PA1]
 gi|315097985|gb|EFT69961.1| 50S ribosomal protein L3 [Propionibacterium acnes HL059PA2]
          Length = 223

 Score =  263 bits (674), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 101/213 (47%), Positives = 130/213 (61%), Gaps = 2/213 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            GV+  KLGMT +++   R +PVTV+    C V   RT + +GY AVQ+G G  K KNV+
Sbjct: 8   KGVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKNVT 67

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P++ L E R   D     +G   +   F+    VDVT  + GKG +G
Sbjct: 68  KPEAGHFEKAGVTPRRHLVELR-TADASEYALGQEIAADVFSESDFVDVTATSKGKGTAG 126

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGGLRATHGV   HRS GS G    PG+V K  +MAGRMG  RVTV+NL+V SV
Sbjct: 127 VMKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQNLQVHSV 186

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           D +RG++LV+G VPG  K S ++VR + K A  
Sbjct: 187 DAERGIMLVRGAVPGP-KGSLLVVRSAAKKAAK 218


>gi|168187814|ref|ZP_02622449.1| ribosomal protein L3 [Clostridium botulinum C str. Eklund]
 gi|169294352|gb|EDS76485.1| ribosomal protein L3 [Clostridium botulinum C str. Eklund]
          Length = 209

 Score =  263 bits (674), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 86/212 (40%), Positives = 130/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ RK+GMT +++  G+ IPVTV+    C V+  ++ +K+GY A+QVG  + + K 
Sbjct: 1   MKKAIIGRKIGMTQIFDENGKVIPVTVVEAGPCAVLQKKSEEKDGYNAIQVGFEDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G F+   VS K+ + EFR++  D+   VG+      F  G  VDVTG++ GKGF
Sbjct: 61  ANKPKKGHFAKAGVSLKRIVKEFRLENIDE-YEVGTEIKADVFEAGDKVDVTGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF      HG S  HR+ GS G   DP R FKNKKM G MG  + TV N+EVV
Sbjct: 120 QGTIKRWNFHRGPMAHG-SKYHRAVGSMGAASDPSRTFKNKKMPGHMGNKKSTVLNIEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V   + ++L+KG +PG  K  +++++D+ K+
Sbjct: 179 KVMADKNVLLIKGGIPGPNKG-YVVIKDTVKA 209


>gi|138893785|ref|YP_001124238.1| 50S ribosomal protein L3 [Geobacillus thermodenitrificans NG80-2]
 gi|196251024|ref|ZP_03149706.1| ribosomal protein L3 [Geobacillus sp. G11MC16]
 gi|166233146|sp|A4IJI9|RL3_GEOTN RecName: Full=50S ribosomal protein L3
 gi|134265298|gb|ABO65493.1| Ribosomal protein L3 [Geobacillus thermodenitrificans NG80-2]
 gi|196209496|gb|EDY04273.1| ribosomal protein L3 [Geobacillus sp. G11MC16]
          Length = 211

 Score =  263 bits (674), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 85/215 (39%), Positives = 124/215 (57%), Gaps = 4/215 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY A+Q+G  +   K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTIENDGYEAIQLGFEDLSTKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP  G  +  N +PK+ + E R    ++   VG       F+ G +VDVTG++ GKGF
Sbjct: 61  ANKPQIGHAAKANTAPKRFIREIRGANVNE-YEVGQEVKVDIFSEGDIVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFK K + GRMGG RVT++NL++V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGAIA-PNRVFKTKNLPGRMGGERVTIQNLKIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            VD +R L+L+KG VPG +K   ++V+ + K+   
Sbjct: 178 KVDPERNLLLIKGNVPGPRKG-LVIVKSAVKAKAK 211


>gi|296168557|ref|ZP_06850361.1| 50S ribosomal protein L3 [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295896620|gb|EFG76259.1| 50S ribosomal protein L3 [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 217

 Score =  263 bits (674), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 91/214 (42%), Positives = 126/214 (58%), Gaps = 3/214 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   R +PVTV+      V   RT +++GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDENNRIVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP+ G +S+  V+P++ L E R+  +       VG   +   F  G  VDVTG + GKG
Sbjct: 63  NKPVTGQYSAAGVNPRRHLAELRLDDEAAAGEYEVGQELTAEIFADGSYVDVTGTSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKRH F G  A+HG    HR  GS G    P RVFK  +MAGRMG +RVTV+NL V
Sbjct: 123 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLVV 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             VD + G++L+KG VPG +    ++VR + K  
Sbjct: 183 HKVDTENGVLLIKGAVPG-RTGGLVMVRSAIKRG 215


>gi|164686527|ref|ZP_02210555.1| hypothetical protein CLOBAR_00094 [Clostridium bartlettii DSM
           16795]
 gi|164604396|gb|EDQ97861.1| hypothetical protein CLOBAR_00094 [Clostridium bartlettii DSM
           16795]
          Length = 209

 Score =  263 bits (674), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 93/211 (44%), Positives = 129/211 (61%), Gaps = 4/211 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GMT ++   G  IPVTV+      V   +T + +GY A+QVG  +AK K+++
Sbjct: 2   KGILGKKIGMTQIFTEHGEVIPVTVVEAGPVVVTQIKTTENDGYTAIQVGFQDAKEKSLN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP +G  ++ N   KK L EFRV    +   VG       F  G+L+DVTG++ GKGF G
Sbjct: 62  KPQKGHLAAANT-LKKHLKEFRVDS-VEEYTVGQEIKADLFAAGELIDVTGISKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRH       THG S  HR  GS G    PGRVFKNKK+AG MG  +VTV+NLEVV V
Sbjct: 120 PIKRHGQSRGPETHG-SRYHRRPGSMGACSYPGRVFKNKKLAGHMGSVKVTVQNLEVVRV 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D  +  ILVKG +PGA K S + ++++ K++
Sbjct: 179 DADKNFILVKGAIPGA-KGSVVTIKEAVKAS 208


>gi|219871730|ref|YP_002476105.1| 50S ribosomal protein L3 [Haemophilus parasuis SH0165]
 gi|254803675|sp|B8F755|RL3_HAEPS RecName: Full=50S ribosomal protein L3
 gi|219691934|gb|ACL33157.1| 50S ribosomal protein L3 [Haemophilus parasuis SH0165]
          Length = 208

 Score =  263 bits (674), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 100/210 (47%), Positives = 133/210 (63%), Gaps = 3/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V RK+GMT ++N +G  IPVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+
Sbjct: 2   IGLVGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKASRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V   + L+EFR +   +   +G   +   FT  + VDVTG + GKGF G
Sbjct: 62  KPEAGHFVKAGVEAGRGLWEFRTEG--EEFTLGQEINVDIFTDVKKVDVTGTSKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV V
Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA  NS ++V+ + K+
Sbjct: 180 DAERKLLLVKGSVPGA-TNSDVIVKPAVKA 208


>gi|16762843|ref|NP_458460.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16766729|ref|NP_462344.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|29144330|ref|NP_807672.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56415359|ref|YP_152434.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62181944|ref|YP_218361.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|168260850|ref|ZP_02682823.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|168468001|ref|ZP_02701838.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|194445166|ref|YP_002042690.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194447875|ref|YP_002047463.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194472945|ref|ZP_03078929.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194737134|ref|YP_002116382.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197248367|ref|YP_002148359.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197264223|ref|ZP_03164297.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197364289|ref|YP_002143926.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|198243139|ref|YP_002217402.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200387538|ref|ZP_03214150.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205354932|ref|YP_002228733.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207858682|ref|YP_002245333.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|213052953|ref|ZP_03345831.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213583772|ref|ZP_03365598.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213613028|ref|ZP_03370854.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|213646335|ref|ZP_03376388.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|213865564|ref|ZP_03387683.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|224585235|ref|YP_002639034.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238913845|ref|ZP_04657682.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289806054|ref|ZP_06536683.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
 gi|289824750|ref|ZP_06544215.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|42559567|sp|P60445|RL3_SALTI RecName: Full=50S ribosomal protein L3
 gi|42559568|sp|P60446|RL3_SALTY RecName: Full=50S ribosomal protein L3
 gi|81309571|sp|Q57J32|RL3_SALCH RecName: Full=50S ribosomal protein L3
 gi|81821488|sp|Q5PIV2|RL3_SALPA RecName: Full=50S ribosomal protein L3
 gi|226730559|sp|B5F8F2|RL3_SALA4 RecName: Full=50S ribosomal protein L3
 gi|226730560|sp|B5FJL4|RL3_SALDC RecName: Full=50S ribosomal protein L3
 gi|226730561|sp|B5R291|RL3_SALEP RecName: Full=50S ribosomal protein L3
 gi|226730562|sp|B5RH15|RL3_SALG2 RecName: Full=50S ribosomal protein L3
 gi|226730563|sp|B4TKL5|RL3_SALHS RecName: Full=50S ribosomal protein L3
 gi|226730564|sp|B4SUU0|RL3_SALNS RecName: Full=50S ribosomal protein L3
 gi|226730565|sp|B5BGY6|RL3_SALPK RecName: Full=50S ribosomal protein L3
 gi|226730566|sp|B4TXE2|RL3_SALSV RecName: Full=50S ribosomal protein L3
 gi|254803688|sp|C0Q0B6|RL3_SALPC RecName: Full=50S ribosomal protein L3
 gi|25294952|pir||AI1005 50S ribosomal chain protein L3 [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16421997|gb|AAL22303.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|16505149|emb|CAD08173.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29139968|gb|AAO71532.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56129616|gb|AAV79122.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62129577|gb|AAX67280.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|194403829|gb|ACF64051.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194406179|gb|ACF66398.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194459309|gb|EDX48148.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194712636|gb|ACF91857.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|195628908|gb|EDX48318.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|197095766|emb|CAR61336.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|197212070|gb|ACH49467.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197242478|gb|EDY25098.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197937655|gb|ACH74988.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|199604636|gb|EDZ03181.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205274713|emb|CAR39769.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205350127|gb|EDZ36758.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|206710485|emb|CAR34843.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224469763|gb|ACN47593.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261248596|emb|CBG26434.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267995649|gb|ACY90534.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301159983|emb|CBW19502.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312914463|dbj|BAJ38437.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320087885|emb|CBY97648.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|321226487|gb|EFX51537.1| LSU ribosomal protein L3p (L3e) [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322615019|gb|EFY11943.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322617306|gb|EFY14207.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322625528|gb|EFY22353.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322626370|gb|EFY23179.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322632118|gb|EFY28871.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322635003|gb|EFY31726.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322643296|gb|EFY39863.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322646620|gb|EFY43127.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322649966|gb|EFY46385.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322652683|gb|EFY49023.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322659560|gb|EFY55804.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322665498|gb|EFY61685.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322670392|gb|EFY66531.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322670465|gb|EFY66599.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322675041|gb|EFY71124.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322681578|gb|EFY77607.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322685922|gb|EFY81911.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|322716431|gb|EFZ08002.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323131798|gb|ADX19228.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323194030|gb|EFZ79230.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323196452|gb|EFZ81603.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323202309|gb|EFZ87354.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207342|gb|EFZ92292.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323211222|gb|EFZ96067.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323216069|gb|EGA00800.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323223440|gb|EGA07768.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323226830|gb|EGA11020.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323231808|gb|EGA15918.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323233239|gb|EGA17334.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323237306|gb|EGA21371.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323245541|gb|EGA29540.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323249047|gb|EGA32969.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323250670|gb|EGA34551.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323256899|gb|EGA40613.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323263048|gb|EGA46595.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323266048|gb|EGA49543.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323272805|gb|EGA56208.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
 gi|326625183|gb|EGE31528.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|326630081|gb|EGE36424.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 209

 Score =  263 bits (674), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 132/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLAEGEE-YTVGQSISVELFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA     ++V+ + K+
Sbjct: 181 DAERNLLLVKGGVPGA-TGCDLIVKPAVKA 209


>gi|261866795|ref|YP_003254717.1| 50S ribosomal protein L3 [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|315633455|ref|ZP_07888745.1| 50S ribosomal protein L3 [Aggregatibacter segnis ATCC 33393]
 gi|261412127|gb|ACX81498.1| ribosomal protein L3 [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|315477497|gb|EFU68239.1| 50S ribosomal protein L3 [Aggregatibacter segnis ATCC 33393]
          Length = 208

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 97/210 (46%), Positives = 132/210 (62%), Gaps = 3/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V RK+GMT ++N +G  +PVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+
Sbjct: 2   IGLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKASRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V   + L+EFR + ++    +G   +   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV V
Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGNERVTVQSLEVVRV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 180 DAERKLLLVKGAVPGA-TGSDVIVKPAVKA 208


>gi|56707478|ref|YP_169374.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110669949|ref|YP_666506.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis
           FSC198]
 gi|254370829|ref|ZP_04986834.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|81820815|sp|Q5NHW8|RL3_FRATT RecName: Full=50S ribosomal protein L3
 gi|122971067|sp|Q14JC0|RL3_FRAT1 RecName: Full=50S ribosomal protein L3
 gi|54112825|gb|AAV29046.1| NT02FT0098 [synthetic construct]
 gi|56603970|emb|CAG44958.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320282|emb|CAL08341.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151569072|gb|EDN34726.1| hypothetical protein FTBG_00644 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|282158622|gb|ADA78013.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 211

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 103/212 (48%), Positives = 139/212 (65%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++  +G  IPVTV+ ++  +V   +T++K+GY A+QV  G  K  N
Sbjct: 1   MSLGLVGRKCGMTRIFTEDGVSIPVTVVQVEPNKVTQVKTVEKDGYNAIQVTTGFKKRSN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM G ++  +V P + L+EF V    +   VGS F  + F  GQ VDV G++ GKGF
Sbjct: 61  VNKPMAGHYAKASVEPGRGLWEFTVDAAAE-YQVGSSFDATMFEAGQKVDVRGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRHNF    ATHG S+SHR HGSTG  Q PGRVFKNKKMAG +G   VT+++LEVV
Sbjct: 120 QGGVKRHNFATQDATHGNSLSHRVHGSTGQNQTPGRVFKNKKMAGHLGNENVTIQSLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD + GL+L+KG +PG+     I+V  + KS
Sbjct: 180 RVDAENGLLLLKGGIPGSVGGD-IIVTPAVKS 210


>gi|91977652|ref|YP_570311.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris BisB5]
 gi|123748930|sp|Q134S9|RL3_RHOPS RecName: Full=50S ribosomal protein L3
 gi|91684108|gb|ABE40410.1| LSU ribosomal protein L3P [Rhodopseudomonas palustris BisB5]
          Length = 241

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 129/219 (58%), Positives = 157/219 (71%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  IPVTVL L NCQVV HRT +KNGY+A+Q+G+G  K   
Sbjct: 1   MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLGNCQVVAHRTTEKNGYVALQLGSGARKTVY 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + K  RG F+   V PK+K+ EFRV +D  L+PVG+     +F VGQ VDVTG + GKGF
Sbjct: 61  MPKAERGQFAVAKVEPKRKVAEFRVSED-ALIPVGAEIQADHFVVGQFVDVTGTSTGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T  NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
             D +RGLILV+G VPG+ K  WI VRD+ K A+     
Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWISVRDAVKKALPADAP 217


>gi|15607841|ref|NP_215215.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis H37Rv]
 gi|15840108|ref|NP_335145.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis CDC1551]
 gi|31791886|ref|NP_854379.1| 50S ribosomal protein L3 [Mycobacterium bovis AF2122/97]
 gi|121636623|ref|YP_976846.1| 50S ribosomal protein L3 [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148660476|ref|YP_001281999.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis H37Ra]
 gi|148821906|ref|YP_001286660.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis F11]
 gi|167967943|ref|ZP_02550220.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis H37Ra]
 gi|215402485|ref|ZP_03414666.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis 02_1987]
 gi|215410256|ref|ZP_03419064.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis 94_M4241A]
 gi|215425943|ref|ZP_03423862.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis T92]
 gi|215429541|ref|ZP_03427460.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis EAS054]
 gi|215444824|ref|ZP_03431576.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis T85]
 gi|218752351|ref|ZP_03531147.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis GM 1503]
 gi|219556550|ref|ZP_03535626.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis T17]
 gi|224989095|ref|YP_002643782.1| 50S ribosomal protein L3 [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253797644|ref|YP_003030645.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis KZN 1435]
 gi|254231021|ref|ZP_04924348.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis C]
 gi|254363648|ref|ZP_04979694.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254549662|ref|ZP_05140109.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260185583|ref|ZP_05763057.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis CPHL_A]
 gi|260199711|ref|ZP_05767202.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis T46]
 gi|260203872|ref|ZP_05771363.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis K85]
 gi|289442102|ref|ZP_06431846.1| LSU ribosomal protein L3 [Mycobacterium tuberculosis T46]
 gi|289446261|ref|ZP_06436005.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis CPHL_A]
 gi|289552958|ref|ZP_06442168.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis KZN 605]
 gi|289568645|ref|ZP_06448872.1| ribosomal protein L3 [Mycobacterium tuberculosis T17]
 gi|289573309|ref|ZP_06453536.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis K85]
 gi|289744425|ref|ZP_06503803.1| ribosomal protein L3 [Mycobacterium tuberculosis 02_1987]
 gi|289749208|ref|ZP_06508586.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis T92]
 gi|289752748|ref|ZP_06512126.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis EAS054]
 gi|289756789|ref|ZP_06516167.1| ribosomal protein L3 [Mycobacterium tuberculosis T85]
 gi|289760828|ref|ZP_06520206.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis GM 1503]
 gi|294996196|ref|ZP_06801887.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis 210]
 gi|297633200|ref|ZP_06950980.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis KZN 4207]
 gi|297730180|ref|ZP_06959298.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis KZN R506]
 gi|298524192|ref|ZP_07011601.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis 94_M4241A]
 gi|306774812|ref|ZP_07413149.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu001]
 gi|306781456|ref|ZP_07419793.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu002]
 gi|306783353|ref|ZP_07421675.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu003]
 gi|306787722|ref|ZP_07426044.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu004]
 gi|306794489|ref|ZP_07432791.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu005]
 gi|306796455|ref|ZP_07434757.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu006]
 gi|306806525|ref|ZP_07443193.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu007]
 gi|306966722|ref|ZP_07479383.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu009]
 gi|306970914|ref|ZP_07483575.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu010]
 gi|307078644|ref|ZP_07487814.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu011]
 gi|307083208|ref|ZP_07492321.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu012]
 gi|313657507|ref|ZP_07814387.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis KZN V2475]
 gi|42560219|sp|P60441|RL3_MYCBO RecName: Full=50S ribosomal protein L3
 gi|42560220|sp|P60442|RL3_MYCTU RecName: Full=50S ribosomal protein L3
 gi|166233162|sp|A1KGI2|RL3_MYCBP RecName: Full=50S ribosomal protein L3
 gi|166233166|sp|A5U087|RL3_MYCTA RecName: Full=50S ribosomal protein L3
 gi|254803684|sp|C1AL35|RL3_MYCBT RecName: Full=50S ribosomal protein L3
 gi|1806169|emb|CAB06464.1| PROBABLE 50S RIBOSOMAL PROTEIN L3 RPLC [Mycobacterium tuberculosis
           H37Rv]
 gi|13880258|gb|AAK44959.1| ribosomal protein L3 [Mycobacterium tuberculosis CDC1551]
 gi|31617473|emb|CAD93583.1| PROBABLE 50S RIBOSOMAL PROTEIN L3 RPLC [Mycobacterium bovis
           AF2122/97]
 gi|121492270|emb|CAL70737.1| Probable 50S ribosomal protein L3 rplC [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124600080|gb|EAY59090.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis C]
 gi|134149162|gb|EBA41207.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148504628|gb|ABQ72437.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis H37Ra]
 gi|148720433|gb|ABR05058.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis F11]
 gi|224772208|dbj|BAH25014.1| 50S ribosomal protein L3 [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253319147|gb|ACT23750.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis KZN 1435]
 gi|289415021|gb|EFD12261.1| LSU ribosomal protein L3 [Mycobacterium tuberculosis T46]
 gi|289419219|gb|EFD16420.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis CPHL_A]
 gi|289437590|gb|EFD20083.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis KZN 605]
 gi|289537740|gb|EFD42318.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis K85]
 gi|289542399|gb|EFD46047.1| ribosomal protein L3 [Mycobacterium tuberculosis T17]
 gi|289684953|gb|EFD52441.1| ribosomal protein L3 [Mycobacterium tuberculosis 02_1987]
 gi|289689795|gb|EFD57224.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis T92]
 gi|289693335|gb|EFD60764.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis EAS054]
 gi|289708334|gb|EFD72350.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis GM 1503]
 gi|289712353|gb|EFD76365.1| ribosomal protein L3 [Mycobacterium tuberculosis T85]
 gi|298493986|gb|EFI29280.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis 94_M4241A]
 gi|308216702|gb|EFO76101.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu001]
 gi|308325756|gb|EFP14607.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu002]
 gi|308331847|gb|EFP20698.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu003]
 gi|308335634|gb|EFP24485.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu004]
 gi|308337249|gb|EFP26100.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu005]
 gi|308343115|gb|EFP31966.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu006]
 gi|308347002|gb|EFP35853.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu007]
 gi|308355577|gb|EFP44428.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu009]
 gi|308359535|gb|EFP48386.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu010]
 gi|308363440|gb|EFP52291.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu011]
 gi|308367078|gb|EFP55929.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu012]
 gi|323720925|gb|EGB29991.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis CDC1551A]
 gi|326905077|gb|EGE52010.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis W-148]
 gi|328457425|gb|AEB02848.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis KZN 4207]
          Length = 217

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 91/214 (42%), Positives = 125/214 (58%), Gaps = 3/214 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   R +PVTV+      V   RT +++GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP+ G +++  V+P++ L E R+   D      VG   +   F  G  VDVTG + GKG
Sbjct: 63  NKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKRH F G  A+HG    HR  GS G    P RVFK  +MAGRMG +RVTV NL V
Sbjct: 123 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLV 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             VD + G++L+KG VPG +    ++VR + K  
Sbjct: 183 HKVDAENGVLLIKGAVPG-RTGGLVMVRSAIKRG 215


>gi|85060256|ref|YP_455958.1| 50S ribosomal protein L3 [Sodalis glossinidius str. 'morsitans']
 gi|109893557|sp|Q2NQM2|RL3_SODGM RecName: Full=50S ribosomal protein L3
 gi|84780776|dbj|BAE75553.1| 50S ribosomal protein L3 [Sodalis glossinidius str. 'morsitans']
          Length = 209

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 96/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT ++  +G  IPVTV+ ++  +V   + L+ +GY A+QV AG  K   V 
Sbjct: 2   KGLIGRKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLENDGYRAIQVTAGTKKANRVI 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFRV +D + + VG   +   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRV-EDGEEVTVGQSITVELFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA     I V+ + K+
Sbjct: 181 DVERNLLLVKGAVPGATGGDLI-VKPAVKA 209


>gi|304391453|ref|ZP_07373395.1| 50S ribosomal protein L3 [Ahrensia sp. R2A130]
 gi|303295682|gb|EFL90040.1| 50S ribosomal protein L3 [Ahrensia sp. R2A130]
          Length = 277

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 134/218 (61%), Positives = 170/218 (77%), Gaps = 2/218 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT +Y  EG  +PVTVL +++ QV+  RT +K+GY AVQ+GAG+AKVKN
Sbjct: 1   MRSGVIAQKVGMTRIYTDEGINVPVTVLRMEHVQVIAQRTEEKHGYTAVQLGAGKAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKPMRG F+   V PK+KL EFRV ++ +L+PVG+    +++  GQ VDVTG TIGKGF
Sbjct: 61  VSKPMRGHFAVAKVEPKRKLAEFRVTEE-NLVPVGAEIIAAHYMPGQFVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRHNFGGLRA+HGVS+SHRSHGSTG  QDPG+VFK K+MAG MG  RVT +N++VV
Sbjct: 120 AGAMKRHNFGGLRASHGVSVSHRSHGSTGQCQDPGKVFKGKRMAGHMGNTRVTTQNIQVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           SVD  RGL+LVKG VPG  K  W+ +RD+ K  V+   
Sbjct: 180 SVDVDRGLVLVKGAVPGP-KGGWVTLRDAIKKPVHPDA 216


>gi|254822787|ref|ZP_05227788.1| 50S ribosomal protein L3 [Mycobacterium intracellulare ATCC 13950]
          Length = 217

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 92/214 (42%), Positives = 127/214 (59%), Gaps = 3/214 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   R +PVTV+      V   RT +++GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDENNRIVPVTVVKAGPNVVTRIRTPEQDGYSAVQLAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP+ G +++  V+P++ L E R+   D      VG   +   FT G  VDVTG + GKG
Sbjct: 63  NKPVTGQYAAAGVNPRRFLAELRLDNPDAAAEYQVGQELTAEIFTDGSYVDVTGTSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKRH F G  A+HG    HR  GS G    P RVFK  +MAGRMG +RVTV+NL V
Sbjct: 123 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             VD + G++L+KG VPG +    ++VR + K  
Sbjct: 183 HKVDTENGVLLIKGAVPG-RTGGLVVVRSAVKRG 215


>gi|261342790|ref|ZP_05970648.1| 50S ribosomal protein L3 [Enterobacter cancerogenus ATCC 35316]
 gi|288314968|gb|EFC53906.1| 50S ribosomal protein L3 [Enterobacter cancerogenus ATCC 35316]
          Length = 209

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQDISVELFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|53803548|ref|YP_114788.1| 50S ribosomal protein L3 [Methylococcus capsulatus str. Bath]
 gi|81823603|sp|Q605B2|RL3_METCA RecName: Full=50S ribosomal protein L3
 gi|53757309|gb|AAU91600.1| ribosomal protein L3 [Methylococcus capsulatus str. Bath]
          Length = 211

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 95/212 (44%), Positives = 130/212 (61%), Gaps = 1/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+H++  +VV  +TL+ +GY A+QV  G  K   
Sbjct: 1   MAIGLVGRKCGMTHIFTDAGAAVPVTVIHVEPNRVVQVKTLESDGYRAIQVTTGSKKRSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++K   G +S   V   + L+EFR++  D    VG+      F  GQ VD    +IGKGF
Sbjct: 61  LTKADAGHYSKAGVEAGRGLWEFRLEDSDQDYTVGTELGVGVFAEGQFVDARARSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNF    ATHG S+SHR+ GS G  Q PGRVFK K+MAG MG   +TV NL +V
Sbjct: 121 AGVVKRHNFRTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKRMAGHMGDKNITVPNLRIV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +D +R L+LVKG VPG  K + ++VR + K 
Sbjct: 181 GIDAERSLLLVKGAVPG-TKGADVIVRPAAKK 211


>gi|33152958|ref|NP_874311.1| 50S ribosomal protein L3 [Haemophilus ducreyi 35000HP]
 gi|42559602|sp|Q7VKD2|RL3_HAEDU RecName: Full=50S ribosomal protein L3
 gi|33149183|gb|AAP96700.1| 50S ribosomal protein L3 [Haemophilus ducreyi 35000HP]
          Length = 208

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 98/210 (46%), Positives = 133/210 (63%), Gaps = 3/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT V+N +G  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   V+
Sbjct: 2   IGLIGRKVGMTRVFNEDGVSIPVTVIEIEANRVTQVKTLENDGYSAIQVTTGTKKASRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V   + L+EFR +   +   +G   +   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFVKAGVEAGRGLWEFRTEG--EEFTLGQEINVDIFADVKKVDVTGTSKGKGFAG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV V
Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA  NS ++V+ + K+
Sbjct: 180 DAERKLLLVKGAVPGA-TNSNVIVKPAVKA 208


>gi|293391695|ref|ZP_06636029.1| ribosomal protein L3 [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290952229|gb|EFE02348.1| ribosomal protein L3 [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 208

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 97/210 (46%), Positives = 132/210 (62%), Gaps = 3/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V RK+GMT ++N +G  +PVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+
Sbjct: 2   IGLVGRKVGMTRIFNEDGVSVPVTVIEVEANRVTQVKTLENDGYTAVQVTTGSKKASRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V   + L+EFR + ++    +G   +   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV V
Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGNERVTVQSLEVVRV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 180 DAERKLLLVKGAVPGA-TGSDVIVKPAVKA 208


>gi|156932231|ref|YP_001436147.1| 50S ribosomal protein L3 [Cronobacter sakazakii ATCC BAA-894]
 gi|166233141|sp|A7MPI7|RL3_ENTS8 RecName: Full=50S ribosomal protein L3
 gi|156530485|gb|ABU75311.1| hypothetical protein ESA_00002 [Cronobacter sakazakii ATCC BAA-894]
          Length = 209

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 97/210 (46%), Positives = 132/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  EG  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEEGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+  D +   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRL-ADGEEYTVGQSISVELFAEVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|327332709|gb|EGE74443.1| 50S ribosomal protein L3 [Propionibacterium acnes HL097PA1]
          Length = 223

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 102/213 (47%), Positives = 131/213 (61%), Gaps = 2/213 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            GV+  KLGMT +++   R +PVTV+    C V   RT + +GY AVQ+G G  K KNV+
Sbjct: 8   KGVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTSETDGYSAVQLGYGAVKAKNVT 67

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P++ L E R   D     +G   +   F+    VDVTG + GKG +G
Sbjct: 68  KPEAGHFEKAGVTPRRHLVELR-TADASEYTLGQEIAADVFSESDFVDVTGTSKGKGTAG 126

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGGLRATHGV   HRS GS G    PG+V K  +MAGRMG  RVTV+NL+V SV
Sbjct: 127 VMKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQNLQVHSV 186

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           D +RG++LV+G VPG  K S ++VR + K A  
Sbjct: 187 DAERGIMLVRGAVPGP-KGSLLVVRSAAKKAAK 218


>gi|323703548|ref|ZP_08115194.1| 50S ribosomal protein L3 [Desulfotomaculum nigrificans DSM 574]
 gi|323531539|gb|EGB21432.1| 50S ribosomal protein L3 [Desulfotomaculum nigrificans DSM 574]
          Length = 209

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 89/212 (41%), Positives = 127/212 (59%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++N EG  IPVTV+    C VV  +T++ +GY A+Q+G GE +   
Sbjct: 1   MPVGILGKKVGMTQIFNKEGIAIPVTVVEAGPCVVVQKKTVETDGYNAIQLGFGEKREAL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G  +   V P + L E RV +D +   VG       F  GQ VDV G + G+GF
Sbjct: 61  INKPTKGHLAKAGVRPVRFLRELRV-EDPNAYEVGQEIKADIFNEGQKVDVVGTSKGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNF      HG S  HR  GS+   + P R FK +K+ G  G  RVTV+NLEVV
Sbjct: 120 AGGIKRHNFHRGPMAHG-SKYHRRPGSS-AAKGPARTFKGRKLPGHYGVERVTVQNLEVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+ +KG VPG  +   +LV++S K+
Sbjct: 178 KVDPERNLLAIKGAVPGP-RGGLLLVKNSVKA 208


>gi|260914680|ref|ZP_05921146.1| 50S ribosomal protein L3 [Pasteurella dagmatis ATCC 43325]
 gi|260631279|gb|EEX49464.1| 50S ribosomal protein L3 [Pasteurella dagmatis ATCC 43325]
          Length = 209

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 96/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V RK+GMT ++N +G  IPVTV+ ++  +V   +T++ +GY A+QV  G  K   V+
Sbjct: 2   IGLVGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTVETDGYSAIQVTTGSKKASRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V   + L+EFR  + ++   +G   +   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFVKAGVEAGRGLWEFRTTEGEEFT-LGQEINVDIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV V
Sbjct: 121 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA  N  ++V+ + K+
Sbjct: 181 DAERKLLLVKGAVPGA-TNGDVIVKPAVKA 209


>gi|170769506|ref|ZP_02903959.1| ribosomal protein L3 [Escherichia albertii TW07627]
 gi|170121563|gb|EDS90494.1| ribosomal protein L3 [Escherichia albertii TW07627]
          Length = 209

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 94/210 (44%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|117924155|ref|YP_864772.1| 50S ribosomal protein L3P [Magnetococcus sp. MC-1]
 gi|212288406|sp|A0L5X3|RL3_MAGSM RecName: Full=50S ribosomal protein L3
 gi|117607911|gb|ABK43366.1| LSU ribosomal protein L3P [Magnetococcus sp. MC-1]
          Length = 214

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 105/213 (49%), Positives = 140/213 (65%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++ RKLGM+ ++  +G+RIPVT++ L  C VV  R+ +++GY AVQ+G  EAK   
Sbjct: 1   MRSGLIGRKLGMSQMFTEDGQRIPVTLVQLGPCAVVAKRSDEQDGYNAVQLGFEEAKPSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SK +RG ++  NV+P++ L EFRV   +    VG   +   F V   VDVTG T+GKGF
Sbjct: 61  LSKTVRGQYAKANVTPRRVLREFRVSNPES-YEVGQELTAEQFAVDSFVDVTGKTVGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR  F G RA+HG    HRS GS G  Q PGRV+KNKKMAG MG    TV+NL+V 
Sbjct: 120 AGVMKRWGFRGGRASHGAHKVHRSGGSIGQCQTPGRVYKNKKMAGHMGQQTRTVQNLKVA 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            VD  + +I VKG +PG+ K S +LVRD+ K  
Sbjct: 180 YVDAVQSIIAVKGSIPGS-KGSLVLVRDALKKG 211


>gi|319778743|ref|YP_004129656.1| LSU ribosomal protein L3p (L3e) [Taylorella equigenitalis MCE9]
 gi|317108767|gb|ADU91513.1| LSU ribosomal protein L3p (L3e) [Taylorella equigenitalis MCE9]
          Length = 233

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 100/212 (47%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ RK+GM  ++  EG  IPVTVL + N +V   ++++ +GY AVQV  G  +   V
Sbjct: 16  RLGLLGRKVGMMRIFTDEGESIPVTVLDVSNNRVTQVKSVETDGYAAVQVAYGTRRASRV 75

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119
           +K   G ++   V     L EFR+          GSV +    F VGQ VDV G TIGKG
Sbjct: 76  NKAQTGHYAKAGVEAGSILKEFRLDPAKAAEFSAGSVVAVDSVFQVGQKVDVQGTTIGKG 135

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRHNFG  RA+HG S SHR  GS G  QDPGR+F  K+M+G MG    TV+NL++
Sbjct: 136 FAGTIKRHNFGAQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMSGHMGDVTRTVQNLDI 195

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +RGL+LVKG VPG  KNS I+V  + K
Sbjct: 196 VRVDAERGLLLVKGAVPG-HKNSDIVVLPAIK 226


>gi|296533987|ref|ZP_06896503.1| 50S ribosomal protein L3 [Roseomonas cervicalis ATCC 49957]
 gi|296265653|gb|EFH11762.1| 50S ribosomal protein L3 [Roseomonas cervicalis ATCC 49957]
          Length = 228

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 128/218 (58%), Positives = 160/218 (73%), Gaps = 2/218 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A+KLGMT ++N +G  +PVTVLHLD  +VV  RT +K+GY AVQ+G G AK KNV
Sbjct: 7   RTGLIAKKLGMTRLFNDDGSTVPVTVLHLDQVRVVAARTEEKDGYNAVQLGFGLAKPKNV 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SKP +G F+   V   KK+ EFRV  D  L P G+  S ++F  GQ+VDVTG + GKGF+
Sbjct: 67  SKPNKGHFAKAGVEAPKKVVEFRVAADAMLEP-GAKLSANHFVKGQIVDVTGTSKGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           GAMKR NF GL ATHGVSISHRSHGSTG RQDPG+ FKNKKMAG +G  RVT +NLEV  
Sbjct: 126 GAMKRWNFSGLEATHGVSISHRSHGSTGNRQDPGKTFKNKKMAGHLGVERVTTQNLEVAG 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            D ++GL+LVKG VPGA K  ++LVRD+ K+A +    
Sbjct: 186 FDLEKGLLLVKGAVPGA-KGGYVLVRDAVKTARHADAP 222


>gi|296105028|ref|YP_003615174.1| 50S ribosomal protein L3 [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295059487|gb|ADF64225.1| 50S ribosomal protein L3 [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295096961|emb|CBK86051.1| LSU ribosomal protein L3P [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 209

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 94/210 (44%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQDISVELFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|32035713|ref|ZP_00135594.1| COG0087: Ribosomal protein L3 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126209224|ref|YP_001054449.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae L20]
 gi|165977196|ref|YP_001652789.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|190151114|ref|YP_001969639.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|303250012|ref|ZP_07336214.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|303253186|ref|ZP_07339335.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307246689|ref|ZP_07528759.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307248831|ref|ZP_07530844.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|307251058|ref|ZP_07532982.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|307253444|ref|ZP_07535315.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307255674|ref|ZP_07537478.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307257857|ref|ZP_07539614.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|307260126|ref|ZP_07541836.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|307262255|ref|ZP_07543904.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|307264464|ref|ZP_07546049.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|166233111|sp|A3N358|RL3_ACTP2 RecName: Full=50S ribosomal protein L3
 gi|226725121|sp|B3GZ11|RL3_ACTP7 RecName: Full=50S ribosomal protein L3
 gi|226725122|sp|B0BST1|RL3_ACTPJ RecName: Full=50S ribosomal protein L3
 gi|126098016|gb|ABN74844.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar
           5b str. L20]
 gi|165877297|gb|ABY70345.1| ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|189916245|gb|ACE62497.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|302647868|gb|EFL78075.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|302651075|gb|EFL81229.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306852389|gb|EFM84624.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306854758|gb|EFM86948.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|306856888|gb|EFM89020.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306859123|gb|EFM91165.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306861351|gb|EFM93341.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306863763|gb|EFM95689.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306865772|gb|EFM97650.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306868018|gb|EFM99845.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|306870161|gb|EFN01920.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 208

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 99/210 (47%), Positives = 132/210 (62%), Gaps = 3/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   V+
Sbjct: 2   IGLVGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDGYSAIQVTTGSKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V   + L+EFR +   +   +G   +   FT  + VDVTG + GKGF G
Sbjct: 62  KPEAGHFVKAGVEAGRGLWEFRTEG--EEFTLGQEINVDIFTDVKKVDVTGTSKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV V
Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA  NS ++V+ + K+
Sbjct: 180 DAERKLLLVKGAVPGA-TNSDVIVKPAVKA 208


>gi|73542863|ref|YP_297383.1| 50S ribosomal protein L3 [Ralstonia eutropha JMP134]
 gi|109893544|sp|Q46WE4|RL3_RALEJ RecName: Full=50S ribosomal protein L3
 gi|72120276|gb|AAZ62539.1| LSU ribosomal protein L3P [Ralstonia eutropha JMP134]
          Length = 216

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 90/217 (41%), Positives = 129/217 (59%), Gaps = 2/217 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+ + + +V   +T + +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTDDGDSIPVTVVEVGDNRVTQIKTDETDGYTAVQVTFGARRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + + EFR+       L  G   S   F VGQ +DV G+TIGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEIIREFRIDAAKAAELQTGGSLSVDLFEVGQKIDVQGVTIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR++F   RATHG S SH   GS G  QDPGRVF  K+M G +G    TV+NLE+
Sbjct: 121 YAGTIKRYHFASGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTRTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
             +D +R L+LVKG +PG+ KN  ++V  + K+    
Sbjct: 181 AKIDAERKLLLVKGAIPGS-KNGKVIVTPAVKAKAKA 216


>gi|39936313|ref|NP_948589.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris CGA009]
 gi|192292037|ref|YP_001992642.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris TIE-1]
 gi|316933527|ref|YP_004108509.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris DX-1]
 gi|42559577|sp|P60456|RL3_RHOPA RecName: Full=50S ribosomal protein L3; AltName: Full=RRP-L3
 gi|226730557|sp|B3QBY0|RL3_RHOPT RecName: Full=50S ribosomal protein L3
 gi|39650168|emb|CAE28691.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris CGA009]
 gi|192285786|gb|ACF02167.1| ribosomal protein L3 [Rhodopseudomonas palustris TIE-1]
 gi|315601241|gb|ADU43776.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris DX-1]
          Length = 241

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 131/219 (59%), Positives = 157/219 (71%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  IPVTVL L NCQV+ HRT +KNGY+A+QVG+G  K   
Sbjct: 1   MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLGNCQVLGHRTKEKNGYVALQVGSGSRKTVY 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + K  RG F++  V PK+K+ EFRV +D  LLPVG+     +F VGQ VDVTG + GKGF
Sbjct: 61  MPKAERGQFAAAKVEPKRKVEEFRVSED-ALLPVGAEIQADHFVVGQFVDVTGTSTGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +RVT  NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRVTTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
             D +RGLILV+G VPG  K  WI VRD+ K A+     
Sbjct: 180 QTDVERGLILVEGAVPG-TKGGWIRVRDAVKKALPADAP 217


>gi|291619176|ref|YP_003521918.1| RplC [Pantoea ananatis LMG 20103]
 gi|291154206|gb|ADD78790.1| RplC [Pantoea ananatis LMG 20103]
 gi|327395506|dbj|BAK12928.1| 50S ribosomal protein L3 RplC [Pantoea ananatis AJ13355]
          Length = 209

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L+ +GY A+QV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKGLENDGYQAIQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR  + D+   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRTVEGDE-YAVGQSISVEIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|319654868|ref|ZP_08008943.1| 50S ribosomal protein L3 [Bacillus sp. 2_A_57_CT2]
 gi|317393431|gb|EFV74194.1| 50S ribosomal protein L3 [Bacillus sp. 2_A_57_CT2]
          Length = 208

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 87/212 (41%), Positives = 127/212 (59%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  ++++ +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVVEAAPNVVLQMKSVETDGYEAIQLGFEDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EFR   D     VG       F  G+ VDVTG++ GKGF
Sbjct: 61  SNKPEKGHVAKANTAPKRFVREFRG-ADLGQYEVGQEVKVDIFAEGETVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    P RVFK K + GRMGG ++TV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGEQITVQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA+K + + ++ + K+
Sbjct: 178 KVDAERNLLLIKGNVPGARK-ALVKIKSAVKA 208


>gi|253682166|ref|ZP_04862963.1| 50S ribosomal protein L3 [Clostridium botulinum D str. 1873]
 gi|253561878|gb|EES91330.1| 50S ribosomal protein L3 [Clostridium botulinum D str. 1873]
          Length = 209

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 89/212 (41%), Positives = 130/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ RK+GMT +++  G+ IPVTV+    C V+  +T +K+GY A+QVG  + + K 
Sbjct: 1   MKKAIIGRKVGMTQIFDENGKVIPVTVVEAGPCAVLQKKTEEKDGYNAIQVGFEDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G F+   VS K+ + EFR++  D+   VGS      F  G  VDVTG++ GKGF
Sbjct: 61  ANKPKKGHFAKAGVSLKRIVREFRLENIDE-YEVGSEIKADVFEAGDKVDVTGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF      HG S  HR+ GS G   DP R FKNKKM G MG  + TV NLEVV
Sbjct: 120 QGTIKRWNFHRGPMAHG-SKYHRAVGSMGAASDPSRTFKNKKMPGHMGHKKSTVLNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V   + +IL+KG +PG  K  +++++++ K+
Sbjct: 179 KVMADKNVILIKGGIPGPNKG-YVVIKNTVKA 209


>gi|54022700|ref|YP_116942.1| 50S ribosomal protein L3 [Nocardia farcinica IFM 10152]
 gi|81823259|sp|Q5Z1W3|RL3_NOCFA RecName: Full=50S ribosomal protein L3
 gi|54014208|dbj|BAD55578.1| putative ribosomal protein L3 [Nocardia farcinica IFM 10152]
          Length = 221

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 90/213 (42%), Positives = 126/213 (59%), Gaps = 2/213 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++ + R +PVTV+      V   RT +++GY AVQV  G    + V+K
Sbjct: 11  GILGTKLGMTQVFDEKNRVVPVTVIKAGPNVVTQIRTEERDGYSAVQVAFGAIDPRKVNK 70

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F+   V+P++ + E RV  D     VG   +   F  G  VDVTG + GKG++G 
Sbjct: 71  PVAGQFAKAGVTPRRHIAEIRV-ADASSFEVGQEINADVFEEGSYVDVTGTSKGKGYAGT 129

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G  A+HG    HR  GS G    PGRVFK  +MAGRMG +RVT +NL V  VD
Sbjct: 130 MKRHGFRGQGASHGAQAVHRRPGSIGGCATPGRVFKGMRMAGRMGNDRVTTQNLSVHKVD 189

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            + GL+L+KG +PG +K   ++V+ + K   + 
Sbjct: 190 AENGLLLIKGAIPG-RKGGVVIVKSAVKGGAHA 221


>gi|2344833|emb|CAB11435.1| ribosomal protein L3 [Mycobacterium leprae]
          Length = 217

 Score =  263 bits (672), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 93/214 (43%), Positives = 125/214 (58%), Gaps = 3/214 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   R +PVTV+      V   RTL+ +GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTLEPDGYSAVQLAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP+ G ++S  V+P++ L E R+   D      VG   +   F     VDVTG + GKG
Sbjct: 63  NKPVTGQYNSAGVNPRRYLAELRLDHPDAAAEYEVGQELTAEIFADATYVDVTGTSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG MKRH F G  A+HG    HR  GS G    P RVFK  +MAGRMG +RVTV+NL V
Sbjct: 123 FSGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             VD + G++L+KG VPG +    ++VR + K  
Sbjct: 183 HKVDTENGVLLIKGAVPG-RTGGLVMVRSAIKRG 215


>gi|320540609|ref|ZP_08040259.1| 50S ribosomal subunit protein L3 [Serratia symbiotica str. Tucson]
 gi|320029540|gb|EFW11569.1| 50S ribosomal subunit protein L3 [Serratia symbiotica str. Tucson]
          Length = 209

 Score =  263 bits (672), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 94/210 (44%), Positives = 131/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + LD +GY A+QV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKGLDTDGYRAIQVTTGSKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+++  +    G   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLEEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG +G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   + I V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGATGGNLI-VKPAVKA 209


>gi|261823232|ref|YP_003261338.1| 50S ribosomal protein L3 [Pectobacterium wasabiae WPP163]
 gi|261607245|gb|ACX89731.1| 50S ribosomal protein L3 [Pectobacterium wasabiae WPP163]
          Length = 209

 Score =  263 bits (672), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 94/210 (44%), Positives = 132/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L EFR+ + ++   +G   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRTLREFRLSEGEEFT-IGQSISVEIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|167854921|ref|ZP_02477697.1| 50S ribosomal protein L3 [Haemophilus parasuis 29755]
 gi|167853988|gb|EDS25226.1| 50S ribosomal protein L3 [Haemophilus parasuis 29755]
          Length = 208

 Score =  263 bits (672), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 99/210 (47%), Positives = 133/210 (63%), Gaps = 3/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V RK+GMT ++N +G  +PVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+
Sbjct: 2   IGLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKASRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V   + L+EFR +   +   +G   +   FT  + VDVTG + GKGF G
Sbjct: 62  KPEAGHFVKAGVEAGRGLWEFRTEG--EEFTLGQEINVDIFTDVKKVDVTGTSKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV V
Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA  NS ++V+ + K+
Sbjct: 180 DAERKLLLVKGSVPGA-TNSDVIVKPAVKA 208


>gi|315605899|ref|ZP_07880930.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315312181|gb|EFU60267.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 221

 Score =  263 bits (672), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 93/211 (44%), Positives = 133/211 (63%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
             ++ RK+GMT V++ +G  +P+TV+ +    V   RT++ +GY A+Q+G GE   + V+
Sbjct: 13  KALLGRKIGMTQVWDADGHLVPLTVVQVGTNVVTQVRTVEVDGYSAIQLGFGEIDSRKVT 72

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    V+P++ L E R  + D    +G     + F  GQ VDV+G T GKGF+G
Sbjct: 73  KPLLGHFEKAGVAPRRHLAEVRTSEHDS-YELGQELDATAFEAGQSVDVSGTTKGKGFAG 131

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    PGR+FK  +MAGRMGGNR TV+NL + +V
Sbjct: 132 VMKRHGFAGVSASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGGNRRTVQNLTIQAV 191

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+L+ G +PG  KN  +LVR S K A
Sbjct: 192 DAEKGLLLISGAIPGP-KNGVVLVRSSVKGA 221


>gi|291562768|emb|CBL41584.1| 50S ribosomal protein L3, bacterial [butyrate-producing bacterium
           SS3/4]
          Length = 211

 Score =  263 bits (672), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N EG  +PVTVL    C V   +T + +GY AVQVG  + + K 
Sbjct: 1   MKKAILATKVGMTQIFNDEGVLVPVTVLQAGPCVVTQVKTEENDGYKAVQVGFVDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F    VS K+ + EFR +  ++   V        F  G  VD T ++ GKGF
Sbjct: 61  VNKPVKGHFDKAGVSYKRFVREFRFENSEE-YNVKDEIKADIFAAGDKVDATAISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR         HG S  HR  GS G    PGRVFK K M G+MG  ++T +NLE+V
Sbjct: 120 QGAIKRLGQSRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGQMGNKKITTQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  LILVKG VPG KK S + ++++ K+
Sbjct: 179 KVDVENNLILVKGAVPGPKK-SLVTLKETVKA 209


>gi|291166879|gb|EFE28925.1| 50S ribosomal protein L3 [Filifactor alocis ATCC 35896]
          Length = 210

 Score =  263 bits (672), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 85/208 (40%), Positives = 125/208 (60%), Gaps = 2/208 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT +++  G  IPVTV+      V   +T + +GY AVQVG GE K K+V+KP
Sbjct: 4   IMGKKIGMTQIFDENGVMIPVTVVEAGPVVVTQIKTEETDGYNAVQVGFGEVKEKHVNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M+G F+   V+ KK + E R +   +   +        F VG+ +DVTG++ GKGF G++
Sbjct: 64  MKGHFAKAGVALKKHVKELRPEDGVENYSLAQEIKVDIFEVGEKIDVTGISKGKGFQGSI 123

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH       THG    HR+ GS G   DP +V K KK+ G MG  RVT++NLEV  VD 
Sbjct: 124 KRHGQSRGPETHGSH-YHRAPGSMGSASDPSKVRKGKKLPGHMGHTRVTIQNLEVARVDA 182

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
           ++ LIL+KG +PG KK   ++++ + K 
Sbjct: 183 EKNLILIKGAIPGPKKG-LVVIKTAVKG 209


>gi|297537531|ref|YP_003673300.1| 50S ribosomal protein L3 [Methylotenera sp. 301]
 gi|297256878|gb|ADI28723.1| 50S ribosomal protein L3 [Methylotenera sp. 301]
          Length = 219

 Score =  263 bits (672), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 86/216 (39%), Positives = 130/216 (60%), Gaps = 2/216 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  +G  IPVTVL +   +V   +T+  +GY  +QV  G  +   
Sbjct: 1   MSLGLIGRKVGMTRVFTEDGASIPVTVLEVVPNRVTQIKTIASDGYTGLQVAYGTRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++  + G ++    +    + EF V  D       G+  +   F  GQ+VDVTG+++GKG
Sbjct: 61  INSALTGHYAKSGSAAGAGIHEFPVTSDVLANYTAGANITVDIFQAGQIVDVTGISLGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+GA+KRH+F   RA+HG S SH   GS G  QDPGRVF  K+M G +G  +VT +NLE+
Sbjct: 121 FAGAIKRHHFKSNRASHGNSKSHNVPGSIGMAQDPGRVFPGKRMPGHLGATKVTTQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           V VD +R L+L+KG +PG+ K   ++VR + K+ + 
Sbjct: 181 VRVDAERNLLLIKGAIPGS-KGGDVVVRPAIKAKLQ 215


>gi|16077184|ref|NP_387997.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221307928|ref|ZP_03589775.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221312249|ref|ZP_03594054.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221317183|ref|ZP_03598477.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221321446|ref|ZP_03602740.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|321313787|ref|YP_004206074.1| 50S ribosomal protein L3 [Bacillus subtilis BSn5]
 gi|1710556|sp|P42920|RL3_BACSU RecName: Full=50S ribosomal protein L3; Short=BL3
 gi|1165303|gb|AAC45956.1| L3 [Bacillus subtilis]
 gi|2632383|emb|CAB11892.1| ribosomal protein L3 (BL3) [Bacillus subtilis subsp. subtilis str.
           168]
 gi|291482489|dbj|BAI83564.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. natto BEST195]
 gi|320020061|gb|ADV95047.1| 50S ribosomal protein L3 [Bacillus subtilis BSn5]
          Length = 209

 Score =  263 bits (672), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 92/212 (43%), Positives = 129/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQLGFDDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    +PK+ + E R  + D    VG       F+ G++VDVTG++ GKGF
Sbjct: 61  SNKPEKGHVAKAETAPKRFVKELRGVEMDA-YEVGQEVKVEIFSAGEIVDVTGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH       +HG S  HR  GS G   DP RVFK K + GRMGG ++TV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPV-DPNRVFKGKLLPGRMGGEQITVQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGAKK S I V+ + KS
Sbjct: 178 KVDAERNLLLIKGNVPGAKK-SLITVKSAVKS 208


>gi|323966282|gb|EGB61717.1| 50S ribosomal protein L3 [Escherichia coli M863]
          Length = 209

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 132/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K   V 
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVI 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|161506006|ref|YP_001573118.1| 50S ribosomal protein L3 [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|189029478|sp|A9MN46|RL3_SALAR RecName: Full=50S ribosomal protein L3
 gi|160867353|gb|ABX23976.1| hypothetical protein SARI_04187 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 209

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 132/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGVKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLAEGEE-YTVGQSISVELFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA     ++V+ + K+
Sbjct: 181 DAERNLLLVKGGVPGA-TGCDLIVKPAVKA 209


>gi|319405898|emb|CBI79530.1| 50S ribosomal protein L3 [Bartonella sp. AR 15-3]
          Length = 246

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 133/219 (60%), Positives = 162/219 (73%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT +YN  G  +PVTVL LD CQVV  RT++KNGY AVQ+G G AK+KN
Sbjct: 1   MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLDKCQVVAQRTVEKNGYTAVQLGVGLAKIKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+ +RG F+   V PK K+ EFRV  D +LL VG+  +  +F  GQ VDVTG++IGKGF
Sbjct: 61  TSQALRGHFAKAVVEPKAKIAEFRVSPD-NLLGVGTEITVEHFVPGQRVDVTGISIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HR+HGSTG  QDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGRVRVTTQNIEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           S D  RGLILV+G V G+ K SWILVRD+ K  +     
Sbjct: 180 STDVDRGLILVRGSVSGS-KGSWILVRDAIKKPLPDNAP 217


>gi|212637954|ref|YP_002314474.1| 50S ribosomal protein L3 [Anoxybacillus flavithermus WK1]
 gi|212559434|gb|ACJ32489.1| Ribosomal protein L3 [Anoxybacillus flavithermus WK1]
          Length = 208

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 86/210 (40%), Positives = 124/210 (59%), Gaps = 4/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY A+Q+G  + + K  +
Sbjct: 2   KGILGRKIGMTQVFAENGDLIPVTVIQATPNVVLQKKTIENDGYEAIQLGFEDLREKLAN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP +G  +  N +PK+ + E R     +   VG       F  G++VDVTG + GKGF G
Sbjct: 62  KPQKGHAAKANTTPKRFIREIRGVNLAE-YEVGQEVKVDIFNEGEIVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRH        HG S  HR  GS G    P RVFK+K++ GRMGG RVTV+NL+VV V
Sbjct: 121 VIKRHGQSRGPMAHG-SRYHRRPGSMGPIA-PNRVFKSKELPGRMGGERVTVQNLKVVKV 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R LIL+KG VPG  K   ++++ + K+
Sbjct: 179 DPERNLILIKGNVPGPNKG-LVIIKSAVKA 207


>gi|260599639|ref|YP_003212210.1| 50S ribosomal protein L3 [Cronobacter turicensis z3032]
 gi|260218816|emb|CBA34171.1| 50S ribosomal protein L3 [Cronobacter turicensis z3032]
          Length = 209

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 97/210 (46%), Positives = 132/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  EG  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEEGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+  D +   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRL-ADGEEFTVGQSISVELFAEVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|229542203|ref|ZP_04431263.1| ribosomal protein L3 [Bacillus coagulans 36D1]
 gi|229326623|gb|EEN92298.1| ribosomal protein L3 [Bacillus coagulans 36D1]
          Length = 209

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 88/212 (41%), Positives = 123/212 (58%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY A+Q+G  +   + 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTVETDGYEAIQLGFADKPERL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  S  N +PK+ + EF      D   VG       F  G +VDVTG+T GKGF
Sbjct: 61  ANKPEKGHVSKANAAPKRFIREFSGVNTSD-FEVGQEVKVDIFAEGDIVDVTGVTKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFK K + GRMGG RVTV+NL++V
Sbjct: 120 QGVIKRHGQHRGPMAHG-SRYHRRPGSMGPIA-PNRVFKQKALPGRMGGERVTVQNLQIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPG +K + + V+ + K+
Sbjct: 178 KVDAERNLLLIKGNVPGPRK-ALVTVKAAVKA 208


>gi|307244784|ref|ZP_07526885.1| 50S ribosomal protein L3 [Peptostreptococcus stomatis DSM 17678]
 gi|306491882|gb|EFM63934.1| 50S ribosomal protein L3 [Peptostreptococcus stomatis DSM 17678]
          Length = 209

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 91/211 (43%), Positives = 128/211 (60%), Gaps = 4/211 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GMT V+   G  +PVTV+      +   +T++ +GY A+QVG  +AK K ++
Sbjct: 2   KGILGKKIGMTQVFTENGEVVPVTVVEAGPVSITQIKTVENDGYQAIQVGFVDAKEKALN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP +G  +   V  K+KL EFRV   +    VG       F  G+ +DVTG++ GKGF G
Sbjct: 62  KPQKGHLAKAGV-LKRKLKEFRVDSLEG-YEVGQELKADIFAEGEKIDVTGISKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRH       THG S  HR  GS G    PGRVFKNKK+AG MG  +VTV+NLEVV V
Sbjct: 120 PIKRHGQSRGPETHG-SRYHRRPGSMGACSYPGRVFKNKKLAGHMGSVKVTVQNLEVVKV 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++ L+L+KG +PGA K S + V+ + K +
Sbjct: 179 DAEKNLLLIKGAIPGA-KGSVVTVKAAIKGS 208


>gi|89255670|ref|YP_513031.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314171|ref|YP_762894.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica
           OSU18]
 gi|118496852|ref|YP_897902.1| 50S ribosomal protein L3 [Francisella tularensis subsp. novicida
           U112]
 gi|134302585|ref|YP_001122556.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|156501620|ref|YP_001427685.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167009889|ref|ZP_02274820.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica
           FSC200]
 gi|187932143|ref|YP_001892128.1| 50S ribosomal protein L3 [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|290953211|ref|ZP_06557832.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295313579|ref|ZP_06804168.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica
           URFT1]
 gi|109893430|sp|Q2A5H0|RL3_FRATH RecName: Full=50S ribosomal protein L3
 gi|122325787|sp|Q0BNS7|RL3_FRATO RecName: Full=50S ribosomal protein L3
 gi|166233143|sp|A7N9S6|RL3_FRATF RecName: Full=50S ribosomal protein L3
 gi|166233144|sp|A0Q4I3|RL3_FRATN RecName: Full=50S ribosomal protein L3
 gi|166233145|sp|A4IZT4|RL3_FRATW RecName: Full=50S ribosomal protein L3
 gi|226725179|sp|B2SDY5|RL3_FRATM RecName: Full=50S ribosomal protein L3
 gi|89143501|emb|CAJ78677.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica
           LVS]
 gi|115129070|gb|ABI82257.1| ribosomal protein L3 [Francisella tularensis subsp. holarctica
           OSU18]
 gi|118422758|gb|ABK89148.1| 50S ribosomal protein L3 [Francisella novicida U112]
 gi|134050362|gb|ABO47433.1| ribosomal protein L3 [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|156252223|gb|ABU60729.1| ribosomal protein L3 [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|187713052|gb|ACD31349.1| 50S ribosomal protein L3 [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|328676321|gb|AEB27191.1| LSU ribosomal protein L3p (L3e) [Francisella cf. novicida Fx1]
          Length = 210

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 103/212 (48%), Positives = 139/212 (65%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++  +G  IPVTV+ ++  +V   +T++K+GY A+QV  G  K  N
Sbjct: 1   MSLGLVGRKCGMTRIFTEDGVSIPVTVVQVEPNKVTQVKTVEKDGYNAIQVTTGFKKRSN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM G ++  +V P + L+EF V    +   VGS F  + F  GQ VDV G++ GKGF
Sbjct: 61  VNKPMAGHYAKASVEPGRGLWEFTVDAAAE-YQVGSSFDATMFEAGQKVDVRGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRHNF    ATHG S+SHR HGSTG  Q PGRVFKNKKMAG +G   VT+++LEVV
Sbjct: 120 QGGVKRHNFATQDATHGNSLSHRVHGSTGQNQTPGRVFKNKKMAGHLGNENVTIQSLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD + GL+L+KG +PG+     I+V  + KS
Sbjct: 180 RVDAENGLLLLKGGIPGSVGGD-IIVTPAVKS 210


>gi|289423692|ref|ZP_06425491.1| 50S ribosomal protein L3 [Peptostreptococcus anaerobius 653-L]
 gi|289155942|gb|EFD04608.1| 50S ribosomal protein L3 [Peptostreptococcus anaerobius 653-L]
          Length = 209

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 92/211 (43%), Positives = 129/211 (61%), Gaps = 4/211 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GMT V+  EG  IPVTV+      V   +TL+ +GY A+QVG  +AK K ++
Sbjct: 2   KGILGKKIGMTQVFTEEGLVIPVTVVEAGPVAVTQIKTLENDGYEAIQVGYVDAKEKALN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP +G  +   V  K+ L EFRV    +   VG       FT G+ +DVTG++ GKGF G
Sbjct: 62  KPQKGHLAKAGV-LKRHLKEFRVD-TVEGYEVGQEIKADLFTAGEKIDVTGISKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRH       +HG S  HR  GS G    PGRVFKNKK+AG MG  ++T++NLEVV V
Sbjct: 120 PIKRHGQSRGPESHG-SRYHRRPGSMGACSYPGRVFKNKKLAGHMGSVKITIQNLEVVRV 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++ L+L+KG +PGA K S + V+ + K +
Sbjct: 179 DAEKNLLLIKGAIPGA-KGSVVTVKAAIKGS 208


>gi|237747365|ref|ZP_04577845.1| 50S ribosomal protein L3 [Oxalobacter formigenes HOxBLS]
 gi|229378716|gb|EEO28807.1| 50S ribosomal protein L3 [Oxalobacter formigenes HOxBLS]
          Length = 222

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 96/216 (44%), Positives = 133/216 (61%), Gaps = 2/216 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GM  ++  EG  IPVTV+ + + +V   +T + +GY AVQV  G+ +   
Sbjct: 5   MSLGLIGRKVGMMRIFTDEGDSIPVTVVDVSDNRVTQVKTTETDGYAAVQVAFGKRRPSR 64

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G ++   V     L EFRV       +  G V   + F VGQ +DV G++IGKG
Sbjct: 65  VNKAAAGHYAKAGVEAGTVLREFRVDATKAAEMKAGDVVPVTLFEVGQKIDVQGVSIGKG 124

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KRHNFG  RATHG S+SH   GS G  QDPGRVF  KKM G MG    TV+NLE+
Sbjct: 125 YAGTIKRHNFGSGRATHGNSLSHNVPGSIGMNQDPGRVFPGKKMTGHMGDETRTVQNLEI 184

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             +D +R L+LVKG VPGA KN+ ++V  + K+ V+
Sbjct: 185 ARIDAERNLLLVKGAVPGA-KNAQVVVCPAVKTKVS 219


>gi|288554725|ref|YP_003426660.1| 50S ribosomal protein L3 [Bacillus pseudofirmus OF4]
 gi|288545885|gb|ADC49768.1| 50S ribosomal protein L3 [Bacillus pseudofirmus OF4]
          Length = 208

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 95/212 (44%), Positives = 130/212 (61%), Gaps = 5/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+  +   V+  +T++ +GY A+Q+G  + K  N
Sbjct: 1   MTKGILGRKIGMTQVFAENGEVIPVTVIEAEPNVVLQKKTVESDGYEAIQIGFADQKKSN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP  G  +  N +PK+ + E  ++  D  L VG+      FT G +VDVTG + GKGF
Sbjct: 61  TNKPQEGHAAKANTAPKRFMKE--IRNFDASLEVGNEVKVDTFTAGDVVDVTGTSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRHN      +HG S  HR  GS G    P RVFK K + GRMGG  VTV+NLE+V
Sbjct: 119 QGAIKRHNQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGETVTVQNLEIV 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  R L+LVKG VPGAKK S++ V+ + K+
Sbjct: 177 KVDTDRNLLLVKGNVPGAKK-SYVSVQSAVKA 207


>gi|325267188|ref|ZP_08133855.1| 50S ribosomal protein L3 [Kingella denitrificans ATCC 33394]
 gi|324981351|gb|EGC16996.1| 50S ribosomal protein L3 [Kingella denitrificans ATCC 33394]
          Length = 215

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 104/214 (48%), Positives = 135/214 (63%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V+  +G  IPVTVL +   +V   ++ + +GY AVQV  GE K  +
Sbjct: 1   MTLGLVGRKVGMTRVFTEQGESIPVTVLEMSANRVTQVKSKETDGYTAVQVTFGEKKTSH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF V ++    L  G   +   F+ GQLVDVTG + GKG
Sbjct: 61  VNKAQAGHFAKAGVEAGRGLHEFVVSEEKAAELKAGDSVTVELFSAGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV++LE+
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKSTVQHLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V VD +R L+LVKG VPGA  NS ++VR S K A
Sbjct: 181 VRVDVERNLLLVKGAVPGAV-NSDVVVRHSVKKA 213


>gi|294789223|ref|ZP_06754462.1| 50S ribosomal protein L3 [Simonsiella muelleri ATCC 29453]
 gi|294482964|gb|EFG30652.1| 50S ribosomal protein L3 [Simonsiella muelleri ATCC 29453]
          Length = 215

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 103/214 (48%), Positives = 135/214 (63%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTVL +   +V   ++ + +GY AVQV  GE K   
Sbjct: 1   MTLGLVGRKVGMTRIFTEQGESIPVTVLEMSTNRVTQVKSKETDGYTAVQVTFGEKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP  G F+   V   + L EF V ++    L  G+V +   F  GQLVDVTG + GKG
Sbjct: 61  VTKPEAGHFAKAGVEAGRGLHEFVVSEEKAAELKAGNVLTVELFQAGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV++LE+
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKSTVQHLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V VD +R L+LVKG VPG+  NS ++V  S K A
Sbjct: 181 VRVDVERNLLLVKGAVPGSV-NSDVVVCHSVKKA 213


>gi|158319543|ref|YP_001512050.1| ribosomal protein L3 [Alkaliphilus oremlandii OhILAs]
 gi|189042830|sp|A8MLE0|RL3_ALKOO RecName: Full=50S ribosomal protein L3
 gi|158139742|gb|ABW18054.1| ribosomal protein L3 [Alkaliphilus oremlandii OhILAs]
          Length = 210

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 91/209 (43%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V RK+GMT +++  G  IPVTV+ ++   V   +T++K+GY A+QVG G+   +NV+
Sbjct: 2   KGLVGRKIGMTQMFDETGLVIPVTVIEVEANAVTQVKTIEKDGYNAIQVGYGQINERNVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP +G F    V+PK+ L EFR++  +     G       F  G  VD++G++ GKGF G
Sbjct: 62  KPSKGHFDKAGVTPKRSLQEFRLESTEG-FTAGQELKADLFKAGDKVDISGVSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHN       HG S  HR  GS G    P RVFK KK+AG MG   VT++NLEVV V
Sbjct: 121 VIKRHNQSRGPMAHG-SRYHRGPGSMGAASYPSRVFKGKKLAGHMGHENVTIQNLEVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D +R L++VKG VPG KK   + +  S K
Sbjct: 180 DVERNLLIVKGAVPGPKKG-LLTINTSIK 207


>gi|319404425|emb|CBI78028.1| 50S ribosomal protein L3 [Bartonella rochalimae ATCC BAA-1498]
          Length = 254

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 133/219 (60%), Positives = 161/219 (73%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+KLGMT +YN  G  +PVTVL LD CQV+  RT+ KNGY AVQ+G G AK+KN
Sbjct: 9   MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLDKCQVIAQRTVKKNGYTAVQLGVGFAKIKN 68

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK +RG F+   V PK K+ EFRV  D +LL VG+  +  +F  GQ VDVTG++IGKGF
Sbjct: 69  TSKALRGHFAKAVVEPKAKIAEFRVSPD-NLLDVGTEITVEHFVPGQRVDVTGVSIGKGF 127

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG RA+HG SI+HR+HGSTG  QDPG+VFK KKMAG MG  RVT +N+EVV
Sbjct: 128 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQARVTTQNIEVV 187

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           S D  RGLILV+G V G+ K SWILVRD+ K  +     
Sbjct: 188 STDVDRGLILVRGSVSGS-KGSWILVRDAIKKRLPDNAP 225


>gi|260893372|ref|YP_003239469.1| 50S ribosomal protein L3 [Ammonifex degensii KC4]
 gi|260865513|gb|ACX52619.1| 50S ribosomal protein L3 [Ammonifex degensii KC4]
          Length = 209

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 88/210 (41%), Positives = 124/210 (59%), Gaps = 4/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +KLGMT  +   G  + VTV+    C VV  +  + +GY A+QVG  E     V+
Sbjct: 2   KGILGKKLGMTQYFTPAGEAMAVTVIKAGPCVVVQTKNRETDGYEAIQVGFEEIPEHRVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+RG F+   + P + L EFRV  D     VG       F+ G+ VDVTG++ GKGF+G
Sbjct: 62  KPLRGHFARAGLKPLRYLREFRV-PDASAYTVGQEIKVDIFSPGEKVDVTGISKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRH F     +HG S  HR  GS G +  P RVFK +K+ G MG  RVTV+NLEVV V
Sbjct: 121 GIKRHGFSRGPMSHG-SKYHRRPGSLGAKG-PARVFKGRKLPGHMGMERVTVQNLEVVKV 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L++VKG VPG  +   ++++ + K+
Sbjct: 179 DPERNLLVVKGAVPGP-RGGLLIIKQAVKA 207


>gi|190891355|ref|YP_001977897.1| 50S ribosomal protein L3 [Rhizobium etli CIAT 652]
 gi|226730554|sp|B3PWS1|RL3_RHIE6 RecName: Full=50S ribosomal protein L3
 gi|190696634|gb|ACE90719.1| 50S ribosomal protein L3 [Rhizobium etli CIAT 652]
 gi|327191386|gb|EGE58412.1| 50S ribosomal protein L3 [Rhizobium etli CNPAF512]
          Length = 213

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 147/215 (68%), Positives = 172/215 (80%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  +PVTVL +D CQVV  RT++KNGY AVQ+GAG+AKVKN
Sbjct: 1   MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMDGCQVVATRTVEKNGYTAVQLGAGQAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+  NV PK KL EFRV +D +LL +G+     +F  GQLVDVTG TIGKGF
Sbjct: 61  TSKAMRGNFAVANVEPKAKLAEFRVSED-NLLEIGTELKAGHFAAGQLVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           S D+ RGLIL+KG VPG+ K +WI+VRD+ KSA  
Sbjct: 180 STDEDRGLILIKGAVPGS-KGAWIIVRDAVKSAAK 213


>gi|116251540|ref|YP_767378.1| 50S ribosomal protein L3 [Rhizobium leguminosarum bv. viciae 3841]
 gi|123261675|sp|Q1MIE1|RL3_RHIL3 RecName: Full=50S ribosomal protein L3
 gi|115256188|emb|CAK07269.1| putative 50S ribosomal protein L3 [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 213

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 147/215 (68%), Positives = 171/215 (79%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  +PVTVL ++ CQVV  RT++KNGY AVQ+GAG+AKVKN
Sbjct: 1   MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMEGCQVVATRTVEKNGYTAVQLGAGQAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+  NV PK KL EFRV +D  LL VG+     +F  GQLVDVTG TIGKGF
Sbjct: 61  TSKAMRGNFAIANVEPKAKLTEFRVSEDQ-LLEVGTEIKAGHFAAGQLVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           S D+ RGLIL+KG VPG+ K +WI+VRD+ KSA  
Sbjct: 180 STDEDRGLILIKGAVPGS-KGAWIIVRDAVKSAAK 213


>gi|42559604|sp|Q7VTD3|RL3_BORPE RecName: Full=50S ribosomal protein L3
 gi|42559605|sp|Q7W2F6|RL3_BORPA RecName: Full=50S ribosomal protein L3
 gi|42559606|sp|Q7WRC5|RL3_BORBR RecName: Full=50S ribosomal protein L3
 gi|33564827|emb|CAE39770.1| 50S ribosomal protein L3 [Bordetella parapertussis]
 gi|33575068|emb|CAE30531.1| 50S ribosomal protein L3 [Bordetella bronchiseptica RB50]
          Length = 233

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 95/216 (43%), Positives = 127/216 (58%), Gaps = 3/216 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+V RK+GMT ++  +G  IPVTVL + N +V   ++L+ +GY A+QV  G  +   V
Sbjct: 16  RLGLVGRKVGMTRIFTEDGESIPVTVLDVSNNRVTQVKSLESDGYAAIQVTYGTRRATRV 75

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP--SYFTVGQLVDVTGMTIGKG 119
            KP  G ++         L EFR+                 S F  GQ VDVTG +IGKG
Sbjct: 76  VKPQAGHYAKAGAEAGSILKEFRLDPARAAEFAAGAVIAVESVFEAGQQVDVTGTSIGKG 135

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRHNFG  RA+HG S SHR  GS G  QDPGR+F  K+M+G MG    TV+NL+V
Sbjct: 136 FAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMSGHMGDVTRTVQNLDV 195

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           V VD +RGL++VKG VPG      ++VR + K+   
Sbjct: 196 VRVDAERGLLMVKGAVPG-HAGGDVIVRPAVKAPAK 230


>gi|161609283|ref|NP_886582.2| 50S ribosomal protein L3 [Bordetella bronchiseptica RB50]
 gi|161610405|ref|NP_882394.2| 50S ribosomal protein L3 [Bordetella parapertussis 12822]
 gi|161610757|ref|NP_882123.2| 50S ribosomal protein L3 [Bordetella pertussis Tohama I]
          Length = 229

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 95/216 (43%), Positives = 127/216 (58%), Gaps = 3/216 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+V RK+GMT ++  +G  IPVTVL + N +V   ++L+ +GY A+QV  G  +   V
Sbjct: 12  RLGLVGRKVGMTRIFTEDGESIPVTVLDVSNNRVTQVKSLESDGYAAIQVTYGTRRATRV 71

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP--SYFTVGQLVDVTGMTIGKG 119
            KP  G ++         L EFR+                 S F  GQ VDVTG +IGKG
Sbjct: 72  VKPQAGHYAKAGAEAGSILKEFRLDPARAAEFAAGAVIAVESVFEAGQQVDVTGTSIGKG 131

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRHNFG  RA+HG S SHR  GS G  QDPGR+F  K+M+G MG    TV+NL+V
Sbjct: 132 FAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMSGHMGDVTRTVQNLDV 191

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           V VD +RGL++VKG VPG      ++VR + K+   
Sbjct: 192 VRVDAERGLLMVKGAVPG-HAGGDVIVRPAVKAPAK 226


>gi|23097574|ref|NP_691040.1| 50S ribosomal protein L3 [Oceanobacillus iheyensis HTE831]
 gi|42559644|sp|Q8ETY2|RL3_OCEIH RecName: Full=50S ribosomal protein L3
 gi|22775797|dbj|BAC12075.1| 50S ribosomal protein L3 [Oceanobacillus iheyensis HTE831]
          Length = 209

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 84/212 (39%), Positives = 123/212 (58%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT +++  G  IPVTV+  +   V+  +TL+ +GY A+Q+G  + K   
Sbjct: 1   MTKGILGRKIGMTQLFSDNGELIPVTVIQAEPNVVLQKKTLENDGYEALQIGFADKKESR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +K  +G       +PK+ + E R   + +   VG       F  G+ +DVTG + GKGF
Sbjct: 61  TNKAEKGHAEKAGTAPKRYVREIRG-AEVNSFEVGQEIKVDIFESGEKIDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       THG    HR+ G+ G   DP RVFK KK+ G MG  +VT++NLEVV
Sbjct: 120 QGVIKRHGQQRGPTTHGSH-FHRAPGAMGVI-DPMRVFKGKKLPGHMGSEQVTIQNLEVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           SVD  + L+L+KG VPGAKK S++ +  + K 
Sbjct: 178 SVDTDKNLLLIKGNVPGAKK-SYVKITSAVKG 208


>gi|319783320|ref|YP_004142796.1| 50S ribosomal protein L3 [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169208|gb|ADV12746.1| 50S ribosomal protein L3 [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 242

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 130/219 (59%), Positives = 163/219 (74%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT +YN  G  +PVTVL ++NCQVV  RT +KNGY AVQ+G G AKVKN
Sbjct: 1   MRSGVIAKKVGMTRIYNDAGEHVPVTVLLMENCQVVAQRTQEKNGYTAVQLGVGLAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F++ +V PK K+ EFRV  D +++ VG+  +  +F  GQ VDVTG TIGKGF
Sbjct: 61  TSKAMRGHFATASVEPKAKVAEFRVSAD-NMIDVGAEITVEHFVAGQKVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH+ GG RATHG S+SHR+HGSTG RQDPG+VFK K MAG MG  RVT +N+E+V
Sbjct: 120 QGVIKRHHMGGGRATHGNSVSHRTHGSTGQRQDPGKVFKGKHMAGHMGDTRVTTQNVEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           S D  RGLIL++G VPG+ K +WILVRD+ K A+     
Sbjct: 180 STDADRGLILIRGAVPGS-KGAWILVRDAAKVALPANAP 217


>gi|152972227|ref|YP_001337373.1| 50S ribosomal protein L3 [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|206576036|ref|YP_002236281.1| ribosomal protein L3 [Klebsiella pneumoniae 342]
 gi|238896816|ref|YP_002921561.1| 50S ribosomal protein L3 [Klebsiella pneumoniae NTUH-K2044]
 gi|262045177|ref|ZP_06018204.1| 50S ribosomal protein L3 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288933266|ref|YP_003437325.1| 50S ribosomal protein L3 [Klebsiella variicola At-22]
 gi|290512069|ref|ZP_06551437.1| 50S ribosomal protein L3 [Klebsiella sp. 1_1_55]
 gi|330002294|ref|ZP_08304288.1| 50S ribosomal protein L3 [Klebsiella sp. MS 92-3]
 gi|166233150|sp|A6TEX2|RL3_KLEP7 RecName: Full=50S ribosomal protein L3
 gi|226730525|sp|B5XN94|RL3_KLEP3 RecName: Full=50S ribosomal protein L3
 gi|150957076|gb|ABR79106.1| 50S ribosomal protein L3 [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|206565094|gb|ACI06870.1| ribosomal protein L3 [Klebsiella pneumoniae 342]
 gi|238549143|dbj|BAH65494.1| 50S ribosomal protein L3 [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259037497|gb|EEW38741.1| 50S ribosomal protein L3 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288887995|gb|ADC56313.1| 50S ribosomal protein L3 [Klebsiella variicola At-22]
 gi|289775859|gb|EFD83859.1| 50S ribosomal protein L3 [Klebsiella sp. 1_1_55]
 gi|328537367|gb|EGF63617.1| 50S ribosomal protein L3 [Klebsiella sp. MS 92-3]
          Length = 209

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 132/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+  D +   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRL-ADGEEFTVGQNISVELFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|114561336|ref|YP_748849.1| 50S ribosomal protein L3 [Shewanella frigidimarina NCIMB 400]
 gi|122301115|sp|Q089Q4|RL3_SHEFN RecName: Full=50S ribosomal protein L3
 gi|114332629|gb|ABI70011.1| LSU ribosomal protein L3P [Shewanella frigidimarina NCIMB 400]
          Length = 212

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 89/213 (41%), Positives = 128/213 (60%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  IPVTV+ +   +V   +TL+ +GY A+QV  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFTEDGTSIPVTVIEIAGNRVTQVKTLETDGYRALQVTTGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++K   G F+   V   + L+E R+   + + + VG+  +   F     VDVTG + GKG
Sbjct: 61  ITKAEAGHFAKGGVEAGRGLWEMRLADGEGEGIEVGAEINVDIFADTVKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF     THG S++HRS+GS G  Q PGRVFK KKM+G MG  +VT +NL V
Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAEQVTTQNLHV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LV+G VPGA     I ++ + K+
Sbjct: 181 VRVDAERNLLLVRGAVPGATNGDLI-IKPAVKA 212


>gi|297717842|gb|ADI50064.1| LSU ribosomal protein L3p [Candidatus Odyssella thessalonicensis
           L13]
          Length = 213

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 115/215 (53%), Positives = 155/215 (72%), Gaps = 3/215 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVK 59
           MR+G++A K+GMT  +  +G  +PVTVL + +C VV  +T D K+GY AVQ+G+ +AK+ 
Sbjct: 1   MRTGLIAEKVGMTQFFAADGTLVPVTVLQVSDCVVVGKKTADSKDGYNAVQIGSNKAKIN 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV+KPMR FF+   + P+  L EFRV  + +LL  G+     +F  GQ VDVTG +IGKG
Sbjct: 61  NVTKPMREFFAKKEIEPRAHLKEFRVSSE-NLLEPGAELKADHFAAGQFVDVTGTSIGKG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+GAMKRHNFGGLRA+HGVS++HRSHGSTG RQDPG+VFKNKKMAG MG  RVT  NL +
Sbjct: 120 FAGAMKRHNFGGLRASHGVSVTHRSHGSTGNRQDPGKVFKNKKMAGHMGARRVTKMNLTI 179

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
             +D ++ LI ++G VPG++    + VRD+ K + 
Sbjct: 180 YGIDAEKNLIFIRGSVPGSQ-GGIVYVRDAIKKSA 213


>gi|113460208|ref|YP_718265.1| 50S ribosomal protein L3 [Haemophilus somnus 129PT]
 gi|170718246|ref|YP_001785266.1| 50S ribosomal protein L3 [Haemophilus somnus 2336]
 gi|122945127|sp|Q0I163|RL3_HAES1 RecName: Full=50S ribosomal protein L3
 gi|189042848|sp|B0UX13|RL3_HAES2 RecName: Full=50S ribosomal protein L3
 gi|112822251|gb|ABI24340.1| LSU ribosomal protein L3P [Haemophilus somnus 129PT]
 gi|168826375|gb|ACA31746.1| ribosomal protein L3 [Haemophilus somnus 2336]
          Length = 208

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 99/210 (47%), Positives = 133/210 (63%), Gaps = 3/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V RK+GMT ++N +G  IPVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+
Sbjct: 2   IGLVGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTLENDGYTAVQVTTGFKKASRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V   + L+EFR +   +   +G   +   FT  + VDVTG + GKGF G
Sbjct: 62  KPEAGHFVKAGVEAGRGLWEFRTEG--EEFTLGQEINVDIFTDVKKVDVTGTSKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LE+V V
Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEIVRV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA  NS ++V+ + K+
Sbjct: 180 DVERKLLLVKGSVPGA-TNSDVIVKPAVKA 208


>gi|322831072|ref|YP_004211099.1| 50S ribosomal protein L3 [Rahnella sp. Y9602]
 gi|321166273|gb|ADW71972.1| 50S ribosomal protein L3 [Rahnella sp. Y9602]
          Length = 209

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 132/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + LD +GY AVQV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLDNDGYRAVQVTTGSKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+ + ++    G   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-AGQNISVEIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   + I V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGATGGNLI-VKPAVKA 209


>gi|329122783|ref|ZP_08251355.1| 50S ribosomal protein L3 [Haemophilus aegyptius ATCC 11116]
 gi|327472047|gb|EGF17485.1| 50S ribosomal protein L3 [Haemophilus aegyptius ATCC 11116]
          Length = 208

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 97/210 (46%), Positives = 131/210 (62%), Gaps = 3/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V RK+GMT ++N +G  +PVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+
Sbjct: 2   IGLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSRKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V   + L+EFR +   +   +G   +   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFVKAGVEAGRGLWEFRTEG--EEFTLGQEINVDIFADVKKVDVTGTSKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV V
Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA  N  ++V+ + K+
Sbjct: 180 DAERKLLLVKGSVPGAI-NGDVIVKPAVKA 208


>gi|311029049|ref|ZP_07707139.1| 50S ribosomal protein L3 [Bacillus sp. m3-13]
          Length = 206

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 90/212 (42%), Positives = 127/212 (59%), Gaps = 7/212 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKVGMTQVFAENGDLIPVTVIEATPNVVLQVKTVETDGYEAIQIGFADKRDKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP++G  +  N +PK+ + E         L VG       F  G +VDVTG++ GKGF
Sbjct: 61  ANKPLKGHVAKANTAPKRFIREISGAN----LEVGQEVKVDIFAEGDVVDVTGISKGKGF 116

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G++KRHN      THG S  HR  GS G    P RVFK K + GRMGG R+T++NLE+V
Sbjct: 117 QGSIKRHNQSRGPMTHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGERITIQNLEIV 174

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPG KK S I ++ + K+
Sbjct: 175 KVDAERNLLLVKGNVPGPKK-SLITIKSAIKA 205


>gi|282855208|ref|ZP_06264540.1| 50S ribosomal protein L3 [Propionibacterium acnes J139]
 gi|282581796|gb|EFB87181.1| 50S ribosomal protein L3 [Propionibacterium acnes J139]
 gi|314924185|gb|EFS88016.1| 50S ribosomal protein L3 [Propionibacterium acnes HL001PA1]
 gi|314965095|gb|EFT09194.1| 50S ribosomal protein L3 [Propionibacterium acnes HL082PA2]
 gi|314982251|gb|EFT26344.1| 50S ribosomal protein L3 [Propionibacterium acnes HL110PA3]
 gi|315090438|gb|EFT62414.1| 50S ribosomal protein L3 [Propionibacterium acnes HL110PA4]
 gi|315093673|gb|EFT65649.1| 50S ribosomal protein L3 [Propionibacterium acnes HL060PA1]
 gi|315103967|gb|EFT75943.1| 50S ribosomal protein L3 [Propionibacterium acnes HL050PA2]
 gi|327326712|gb|EGE68498.1| 50S ribosomal protein L3 [Propionibacterium acnes HL103PA1]
          Length = 223

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 101/213 (47%), Positives = 130/213 (61%), Gaps = 2/213 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            GV+  KLGMT +++   R +PVTV+    C V   RT + +GY AVQ+G G  K K V+
Sbjct: 8   KGVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKKVT 67

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P++ L E R   D     +G   +   F+    VDVTG + GKG +G
Sbjct: 68  KPEAGHFEKAGVTPRRHLVELR-TADASEYTLGQEIAADVFSESDFVDVTGTSKGKGTAG 126

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGGLRATHGV   HRS GS G    PG+V K  +MAGRMG  RVTV+NL+V SV
Sbjct: 127 VMKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQNLQVHSV 186

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           D +RG++LV+G VPG  K S ++VR + K A  
Sbjct: 187 DAERGIMLVRGAVPGP-KGSLLVVRSAAKKAAK 218


>gi|291544460|emb|CBL17569.1| LSU ribosomal protein L3P [Ruminococcus sp. 18P13]
          Length = 211

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 92/213 (43%), Positives = 133/213 (62%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M+ G++ +K+GMT +++   G+ IPVTV+    C VV  +T++ +GY A+Q+G  + K +
Sbjct: 1   MQKGIIGKKIGMTQIFDQEAGKVIPVTVVEAGPCVVVQKKTVENDGYAALQIGFDDVKAQ 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++KPM+G F    V  K+ L EFR+  D D L VG +     F VG +VDV+G + GKG
Sbjct: 61  RINKPMKGHFDKSEVGYKRVLKEFRLD-DCDALNVGDLLKADTFAVGDIVDVSGTSKGKG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+GA+KRHN   L+ THG    HR  GS G    P R++K K MAG MG  +VTV+NLEV
Sbjct: 120 FTGAIKRHNQHRLKETHGTGPVHRQAGSMGACSSPSRIYKGKGMAGHMGAEKVTVQNLEV 179

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V +D +  LI +KG +PG  K   + + DS K+
Sbjct: 180 VKIDVENNLIALKGAIPGP-KGGVVCITDSVKA 211


>gi|237666933|ref|ZP_04526918.1| 50S ribosomal protein L3 [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|237658132|gb|EEP55687.1| 50S ribosomal protein L3 [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 209

 Score =  262 bits (670), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 84/212 (39%), Positives = 126/212 (59%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT +++  G+ +PVTV+    C VV  +TL+ +GY A+QVG  E + K 
Sbjct: 1   MKKAIIGKKIGMTQIFDENGKVVPVTVVEAGPCVVVQKKTLENDGYEAIQVGFEEIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G F+   VS ++ L EFR+ +D     VG       F  G  VDV+ ++ GKGF
Sbjct: 61  ANKPRKGQFAKAGVSIRRTLKEFRL-EDITSYEVGQEIKADVFEAGDKVDVSAVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR N      THG S  HR+ GS G   DP R FKNK+M G MG    TV NL+VV
Sbjct: 120 QGCIKRWNQQRGPMTHG-SKFHRAPGSMGASSDPSRTFKNKRMPGHMGSVNTTVLNLQVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ LIL+KG +PG  K + + ++++ ++
Sbjct: 179 KVIAEKNLILIKGGIPGPNKGTVV-IKNTVRA 209


>gi|144900884|emb|CAM77748.1| 50S ribosomal protein L3 [Magnetospirillum gryphiswaldense MSR-1]
          Length = 230

 Score =  262 bits (670), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 128/215 (59%), Positives = 164/215 (76%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GMT ++  +G  +PVTVL +D  QVV  R+++K+GY AVQ+GAG AKVKN
Sbjct: 1   MRSGLIAQKVGMTRIFTEDGTHVPVTVLKVDTVQVVSTRSVEKDGYTAVQLGAGTAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K  R  F++  V PKKKL EFRV  + ++L VG   S ++F  GQ VD+TG TIGKGF
Sbjct: 61  VAKAQRTTFANAKVEPKKKLVEFRVAPE-NVLEVGVELSAAHFIPGQFVDITGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NF GL ATHGVS+SHRSHGSTG RQDPG+VFK KKMAG MG  +VT +NL+VV
Sbjct: 120 AGGMKRWNFRGLEATHGVSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDEQVTTQNLKVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           S D +RGLILVKG VPG++  SW+LV+D+ K  + 
Sbjct: 180 STDVERGLILVKGSVPGSE-GSWVLVKDAVKRKLP 213


>gi|224005591|ref|XP_002291756.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220972275|gb|EED90607.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 232

 Score =  262 bits (670), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 109/214 (50%), Positives = 136/214 (63%), Gaps = 4/214 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVKN 60
           R G +  KLGM  +++  G R P TVL+LDN  VV  ++ D  +GY AVQ+GAGE K KN
Sbjct: 20  RCGALGIKLGMMPLWDKWGERHPCTVLYLDNNVVVRTKSKDSVDGYDAVQIGAGERKAKN 79

Query: 61  VSKPMRGFFSSVNVS--PKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           V+KP+   ++   V+  P   + EFRV   D + P GS     +F  GQ VD+ G + GK
Sbjct: 80  VNKPLMCHYAKFGVNENPPYVVREFRVTTPDAMPPPGSKIHARHFVPGQNVDIAGTSKGK 139

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G MKRH F G+ ATHG S SHR+ GSTG  QDPGRVFK KKM GRMGG RVT +NL 
Sbjct: 140 GFQGGMKRHGFKGMPATHGTSKSHRAIGSTGQCQDPGRVFKGKKMPGRMGGVRVTKQNLR 199

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VV +D  R LI VKG VPG  K  ++ +RD+ K 
Sbjct: 200 VVKIDRGRNLIYVKGAVPG-NKGEFVEIRDAVKK 232


>gi|86749415|ref|YP_485911.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris HaA2]
 gi|109893547|sp|Q2IXR0|RL3_RHOP2 RecName: Full=50S ribosomal protein L3
 gi|86572443|gb|ABD07000.1| LSU ribosomal protein L3P [Rhodopseudomonas palustris HaA2]
          Length = 241

 Score =  262 bits (670), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 128/219 (58%), Positives = 159/219 (72%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  IPVTVL L NCQV+ HRT +KNGY+A+Q+G+G  K   
Sbjct: 1   MRSGVIAQKVGMTRVFTETGEHIPVTVLKLGNCQVLAHRTTEKNGYVALQLGSGARKTVY 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + K  RG F+   V PK+K+ EFRV +D  L+PVG+     +F VGQ VDVTG ++GKGF
Sbjct: 61  MPKAERGQFAVAKVEPKRKVAEFRVSED-ALIPVGAEIQADHFVVGQFVDVTGTSVGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T  NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            +D +RGLILV+G VPG+ K  WI VRD+ K A+     
Sbjct: 180 QLDVERGLILVEGAVPGS-KGGWISVRDAVKKALPADAP 217


>gi|294669824|ref|ZP_06734883.1| hypothetical protein NEIELOOT_01717 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308217|gb|EFE49460.1| hypothetical protein NEIELOOT_01717 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 214

 Score =  262 bits (670), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGASVPVTVLEMTPNRVTQLKSEDADGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF V  +    L  G   + + F  GQLVDVTG + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLVEFAVSAEKAAELQAGGEVTVALFEAGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNF   R +HG S SHR  GS G  QDPGRVF  ++MAG+ G  + TV+NLE+
Sbjct: 121 FSGTIKRHNFDSQRTSHGNSRSHRVPGSIGMAQDPGRVFPGQRMAGQYGNTKATVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPGA  NS ++VR S K
Sbjct: 181 VRVDVERHLLLVKGAVPGAV-NSDVIVRPSVK 211


>gi|291460718|ref|ZP_06600108.1| 50S ribosomal protein L3 [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291416677|gb|EFE90396.1| 50S ribosomal protein L3 [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 209

 Score =  262 bits (670), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 82/212 (38%), Positives = 118/212 (55%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT +++  G  IPVTVL    C V   +TL+ +GY AVQVG  + + + 
Sbjct: 1   MKKAILAIKVGMTQIWDENGILIPVTVLQAGPCVVTQVKTLENDGYKAVQVGFQDKRERL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++P +G F    V  K+ + EFR +  ++  P         F  G  VDVT ++ GKGF
Sbjct: 61  VNRPEKGQFDKAGVPCKRFVREFRFENSEEYKP-KDEIKADIFAAGDKVDVTAVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
             A++++        HG S  HR  GS G    P RV   K M   MG  RVT +NL VV
Sbjct: 120 QSAIRKYGQHRGPMAHG-SKFHRHQGSNGTSATPSRVLPGKGMPSHMGAVRVTTQNLSVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD + GLIL+KG VPG KK + + V+++ K+
Sbjct: 179 RVDAENGLILIKGAVPGPKK-ALVTVKEAVKA 209


>gi|16272718|ref|NP_438936.1| 50S ribosomal protein L3 [Haemophilus influenzae Rd KW20]
 gi|68249373|ref|YP_248485.1| 50S ribosomal protein L3 [Haemophilus influenzae 86-028NP]
 gi|145630522|ref|ZP_01786302.1| acetyl-CoA:acetoacetyl-CoA transferase subunit alpha [Haemophilus
           influenzae R3021]
 gi|145632130|ref|ZP_01787865.1| acetyl-CoA:acetoacetyl-CoA transferase subunit alpha [Haemophilus
           influenzae 3655]
 gi|145634812|ref|ZP_01790520.1| 50S ribosomal protein L3 [Haemophilus influenzae PittAA]
 gi|145636667|ref|ZP_01792334.1| 50S ribosomal protein L3 [Haemophilus influenzae PittHH]
 gi|145638423|ref|ZP_01794033.1| 50S ribosomal protein L3 [Haemophilus influenzae PittII]
 gi|229844644|ref|ZP_04464783.1| 50S ribosomal protein L3 [Haemophilus influenzae 6P18H1]
 gi|229845827|ref|ZP_04465939.1| 50S ribosomal protein L3 [Haemophilus influenzae 7P49H1]
 gi|260579868|ref|ZP_05847698.1| 50S ribosomal protein L3 [Haemophilus influenzae RdAW]
 gi|260581595|ref|ZP_05849392.1| 50S ribosomal protein L3 [Haemophilus influenzae NT127]
 gi|319775289|ref|YP_004137777.1| 50S ribosomal subunit protein L3 [Haemophilus influenzae F3047]
 gi|319897729|ref|YP_004135926.1| 50S ribosomal subunit protein l3 [Haemophilus influenzae F3031]
 gi|325577127|ref|ZP_08147611.1| 50S ribosomal protein L3 [Haemophilus parainfluenzae ATCC 33392]
 gi|1173047|sp|P44344|RL3_HAEIN RecName: Full=50S ribosomal protein L3
 gi|81336200|sp|Q4QMC2|RL3_HAEI8 RecName: Full=50S ribosomal protein L3
 gi|1573787|gb|AAC22436.1| ribosomal protein L3 (rpL3) [Haemophilus influenzae Rd KW20]
 gi|68057572|gb|AAX87825.1| 50S ribosomal protein L3 [Haemophilus influenzae 86-028NP]
 gi|144983912|gb|EDJ91354.1| acetyl-CoA:acetoacetyl-CoA transferase subunit alpha [Haemophilus
           influenzae R3021]
 gi|144987037|gb|EDJ93567.1| acetyl-CoA:acetoacetyl-CoA transferase subunit alpha [Haemophilus
           influenzae 3655]
 gi|145267978|gb|EDK07974.1| 50S ribosomal protein L3 [Haemophilus influenzae PittAA]
 gi|145270193|gb|EDK10129.1| 50S ribosomal protein L3 [Haemophilus influenzae PittHH]
 gi|145272752|gb|EDK12659.1| 50S ribosomal protein L3 [Haemophilus influenzae PittII]
 gi|229810831|gb|EEP46548.1| 50S ribosomal protein L3 [Haemophilus influenzae 7P49H1]
 gi|229812358|gb|EEP48048.1| 50S ribosomal protein L3 [Haemophilus influenzae 6P18H1]
 gi|260093152|gb|EEW77085.1| 50S ribosomal protein L3 [Haemophilus influenzae RdAW]
 gi|260095188|gb|EEW79079.1| 50S ribosomal protein L3 [Haemophilus influenzae NT127]
 gi|301155330|emb|CBW14796.1| 50S ribosomal subunit protein L3 [Haemophilus parainfluenzae T3T1]
 gi|301169494|emb|CBW29095.1| 50S ribosomal subunit protein L3 [Haemophilus influenzae 10810]
 gi|309751562|gb|ADO81546.1| 50S ribosomal protein L3 [Haemophilus influenzae R2866]
 gi|309973732|gb|ADO96933.1| 50S ribosomal protein L3 [Haemophilus influenzae R2846]
 gi|317433235|emb|CBY81610.1| 50S ribosomal subunit protein L3 [Haemophilus influenzae F3031]
 gi|317449880|emb|CBY86091.1| 50S ribosomal subunit protein L3 [Haemophilus influenzae F3047]
 gi|325160709|gb|EGC72830.1| 50S ribosomal protein L3 [Haemophilus parainfluenzae ATCC 33392]
          Length = 208

 Score =  262 bits (670), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 97/210 (46%), Positives = 132/210 (62%), Gaps = 3/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V RK+GMT ++N +G  +PVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+
Sbjct: 2   IGLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V   + L+EFR + ++    +G   +   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV V
Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA  N  ++V+ + K+
Sbjct: 180 DAERKLLLVKGSVPGAI-NGDVIVKPAVKA 208


>gi|260579267|ref|ZP_05847151.1| 50S ribosomal protein L3 [Corynebacterium jeikeium ATCC 43734]
 gi|258602619|gb|EEW15912.1| 50S ribosomal protein L3 [Corynebacterium jeikeium ATCC 43734]
          Length = 218

 Score =  262 bits (670), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 91/214 (42%), Positives = 125/214 (58%), Gaps = 2/214 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +KLGMT +++ E R +PVTV+    C V   RT + +GY AVQ+  GE   + V+
Sbjct: 7   KGILGKKLGMTQIFDEENRVVPVTVVEAGPCVVTQVRTKETDGYEAVQIAFGEIDPRKVN 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P++ + E RV  D     VG   +   F   + VDVTG T GKG++G
Sbjct: 67  KPAAGHFKKAGVTPRRHVAEIRV-ADASSYEVGQDVTVDIFNDVKFVDVTGTTKGKGYAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G  A HG   +HR  GS G    PGRVFK K+MAGRMG +RVT +NL+V  V
Sbjct: 126 GMKRHGFAGQGAAHGNQAAHRRVGSIGQAATPGRVFKGKRMAGRMGNDRVTQQNLKVAKV 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           D +  L+L+KG VPG      ++V+ + K   + 
Sbjct: 186 DAESNLLLIKGAVPGVN-GGLVVVKTAVKGGAHA 218


>gi|227115272|ref|ZP_03828928.1| 50S ribosomal protein L3 [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 209

 Score =  262 bits (670), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 94/210 (44%), Positives = 131/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY A QV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAAQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L EFR+ + ++   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRTLREFRLSEGEEFT-VGQSISVEIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|119773354|ref|YP_926094.1| 50S ribosomal protein L3 [Shewanella amazonensis SB2B]
 gi|166234590|sp|A1S218|RL3_SHEAM RecName: Full=50S ribosomal protein L3
 gi|119765854|gb|ABL98424.1| LSU ribosomal protein L3P [Shewanella amazonensis SB2B]
          Length = 212

 Score =  262 bits (670), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 92/213 (43%), Positives = 128/213 (60%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKTLENDGYRALQVTTGAKKAHR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV-FSPSYFTVGQLVDVTGMTIGKG 119
           V+KP  G F+   V   + L+E R+ + +          +   F   Q VDVTG + GKG
Sbjct: 61  VTKPEAGHFAKAGVEAGRGLWEMRLGEGEGEGIEVGAELNVEIFADVQKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF     THG S+SHR++GS G  Q PGRVFK KKM+G MG  RVT +NL+V
Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLSHRANGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LVKG VPGA     I ++ + K+
Sbjct: 181 VRVDVERNLLLVKGAVPGATNGDLI-IKPAVKA 212


>gi|322515635|ref|ZP_08068613.1| 50S ribosomal protein L3 [Actinobacillus ureae ATCC 25976]
 gi|322118286|gb|EFX90569.1| 50S ribosomal protein L3 [Actinobacillus ureae ATCC 25976]
          Length = 208

 Score =  262 bits (670), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 99/210 (47%), Positives = 133/210 (63%), Gaps = 3/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   V+
Sbjct: 2   IGLVGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDGYSAIQVTTGTKKASRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V   + L+EFR +   +   +G   +   FT  + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFVKAGVEAGRGLWEFRTEG--EEFTLGQEINIDIFTDVKKVDVTGTSKGKGFAG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV V
Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA  NS ++V+ + K+
Sbjct: 180 DAERKLLLVKGAVPGA-TNSDVIVKPAVKA 208


>gi|303256450|ref|ZP_07342464.1| 50S ribosomal protein L3 [Burkholderiales bacterium 1_1_47]
 gi|331000644|ref|ZP_08324297.1| 50S ribosomal protein L3 [Parasutterella excrementihominis YIT
           11859]
 gi|302859941|gb|EFL83018.1| 50S ribosomal protein L3 [Burkholderiales bacterium 1_1_47]
 gi|329570856|gb|EGG52567.1| 50S ribosomal protein L3 [Parasutterella excrementihominis YIT
           11859]
          Length = 216

 Score =  262 bits (670), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 98/214 (45%), Positives = 134/214 (62%), Gaps = 2/214 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           + G+V RK+GMT ++  +G  IPVTVL + N ++   +T++ +GY AVQV  G  K   V
Sbjct: 4   KLGLVGRKIGMTRIFTEDGVSIPVTVLEVSNNRITQVKTVETDGYNAVQVAFGSKKPSRV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           SKP++G F    V     L EF V++D    + VG   S   F+ GQ VDVTG TIGKGF
Sbjct: 64  SKPLKGQFEKAGVEAGSMLKEFHVEEDKIGEMKVGQTLSIDMFSEGQKVDVTGTTIGKGF 123

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GA+KRH+F   RA+HG S+S  + GS G RQDPGRVF  K+MAG +G  + T +NL + 
Sbjct: 124 AGAIKRHHFSSNRASHGNSVSTNAPGSIGNRQDPGRVFPGKRMAGHLGDVQRTTQNLVIA 183

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            VD  R LILV+G VPG   N  +++R + K+  
Sbjct: 184 RVDADRQLILVRGAVPGCA-NGEVIIRPAVKAKA 216


>gi|319443065|ref|ZP_07992221.1| 50S ribosomal protein L3 [Corynebacterium variabile DSM 44702]
          Length = 218

 Score =  262 bits (670), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 87/214 (40%), Positives = 124/214 (57%), Gaps = 2/214 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +KLGMT +++ E R +PVTV+    C V   RT D +GY AVQ+  G+   + V 
Sbjct: 7   KGILGKKLGMTQIFDEENRVVPVTVVEAGPCVVTQVRTKDTDGYEAVQIAFGDIDPRKVK 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P++ + E RV +D     VG   +   F     VDVTG + GKG++G
Sbjct: 67  KPQAGHFKKAGVTPRRHVTEIRV-EDASAYEVGQDITAELFADVTFVDVTGTSKGKGYAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRH F G  A+HG   +HR  G  G    PGRVFK  +MAGRMG N+VT++NL++  V
Sbjct: 126 AMKRHGFAGQGASHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGNNQVTLQNLKIARV 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           D +  L+L+KG +PG      + V+ + K   + 
Sbjct: 186 DAESNLVLIKGAIPG-INGGIVTVKTAVKGGAHA 218


>gi|291291685|gb|ADD91676.1| 50S ribosomal protein L3 [Enterococcus faecium]
          Length = 209

 Score =  262 bits (670), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 129/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY A+QVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQVKTMETDGYEAIQVGYQDMREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF+   +     VG   +   F  G ++DVTG T GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREFK-NVELGEYEVGKEITVDVFQAGDIIDVTGTTKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK++AGRMGGNRVT++NLEVV
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPV-TPNRVFKNKRLAGRMGGNRVTIQNLEVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R +IL+KG VPGAKK S I ++ + K+
Sbjct: 178 RVDAERNVILIKGNVPGAKK-SLITIKSAVKA 208


>gi|152973956|ref|YP_001373473.1| 50S ribosomal protein L3 [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|189042831|sp|A7GK20|RL3_BACCN RecName: Full=50S ribosomal protein L3
 gi|152022708|gb|ABS20478.1| ribosomal protein L3 [Bacillus cytotoxicus NVH 391-98]
          Length = 210

 Score =  262 bits (670), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 92/213 (43%), Positives = 133/213 (62%), Gaps = 4/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGELIPVTVIEATPNVVLQKKTTETDGYNAIQLGFEDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  + +PK+ + E R   D D L VG       F  G+ VDVTG++ GKGF
Sbjct: 61  ANKPEQGHVAKASTAPKRFIREIR-DADVDGLEVGQEVKVEVFAAGETVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH       +HG S  HR  GS G    P RVFK KK+AGRMGG+++T++NLE+V
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQITIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            VD +R L+L+KG VPGAKK S ++V+ + K++
Sbjct: 178 QVDVERNLLLIKGNVPGAKK-SLVVVQGAVKAS 209


>gi|312140918|ref|YP_004008254.1| 50S ribosomal protein l3 rplc [Rhodococcus equi 103S]
 gi|325675444|ref|ZP_08155128.1| 50S ribosomal protein L3 [Rhodococcus equi ATCC 33707]
 gi|311890257|emb|CBH49575.1| 50S ribosomal protein L3 RplC [Rhodococcus equi 103S]
 gi|325553415|gb|EGD23093.1| 50S ribosomal protein L3 [Rhodococcus equi ATCC 33707]
          Length = 217

 Score =  262 bits (670), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 88/214 (41%), Positives = 124/214 (57%), Gaps = 2/214 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   R +PVTV+      V   RT +++GY AVQ+  G    + V+
Sbjct: 6   KGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQIRTEERDGYSAVQLAFGAIDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V+P++ + E RV  D     VG   +   F  G  VDVTG + GKGF+G
Sbjct: 66  KPTSGQFAKAGVTPRRHVVELRV-ADTSEYEVGQELTAEVFEDGAYVDVTGTSKGKGFAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G  A+HG    HR  GS G    PGRVFK  +M+GRMG +R+T +NL V  V
Sbjct: 125 TMKRHGFAGQGASHGAQAVHRRPGSIGGCATPGRVFKGMRMSGRMGSDRITTQNLSVHKV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           D + GL+L+KG +PG +K   ++V+ + K   + 
Sbjct: 185 DAENGLLLIKGAIPG-RKGGLVIVKTAVKGGASA 217


>gi|167749439|ref|ZP_02421566.1| hypothetical protein EUBSIR_00393 [Eubacterium siraeum DSM 15702]
 gi|167657611|gb|EDS01741.1| hypothetical protein EUBSIR_00393 [Eubacterium siraeum DSM 15702]
 gi|291532093|emb|CBK97678.1| LSU ribosomal protein L3P [Eubacterium siraeum 70/3]
 gi|291558166|emb|CBL35283.1| LSU ribosomal protein L3P [Eubacterium siraeum V10Sc8a]
          Length = 211

 Score =  262 bits (669), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 86/213 (40%), Positives = 125/213 (58%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT +++  G+ +PVTV+    C V   +T + +GY AVQ+G G+   K+
Sbjct: 1   MTKGLIGKKIGMTQIFDEAGKVVPVTVIEAGPCVVTQLKTAENDGYEAVQLGFGDVSPKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KPM G F   ++  K+ L EFR+  D   + VG V     F  G ++DV+G++ GKGF
Sbjct: 61  TNKPMTGHFKKNDLPFKRTLKEFRLD-DISNVNVGDVLKADVFAAGDVIDVSGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRHN   L+ THG     R  GS G    P R+FK K MAG MG   VTV+NL +V
Sbjct: 120 QGAIKRHNQHRLKETHGTGPVVRQAGSMGACSSPSRIFKGKGMAGHMGAENVTVQNLVIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +D +  LI +KG +PG  K   + + D+ K A
Sbjct: 180 KIDAENNLIAIKGAIPGP-KGGVVCITDAVKKA 211


>gi|120553652|ref|YP_958003.1| ribosomal protein L3 [Marinobacter aquaeolei VT8]
 gi|166233153|sp|A1TYJ7|RL3_MARAV RecName: Full=50S ribosomal protein L3
 gi|120323501|gb|ABM17816.1| LSU ribosomal protein L3P [Marinobacter aquaeolei VT8]
          Length = 212

 Score =  262 bits (669), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 92/213 (43%), Positives = 132/213 (61%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK GMT ++  EG+ +PVTV+ ++  ++   +TL+ +GY AVQV  G  +   
Sbjct: 1   MAIGVVGRKAGMTRIFTDEGQALPVTVIEVEPNRITQLKTLESDGYRAVQVTVGSRRSSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + ++EFR+   + + L  G   + S F  GQ+VD  G + GKG
Sbjct: 61  VNKAAAGHFAKAGVEAGRGVWEFRLADGEGEDLAAGGELTVSVFEDGQVVDAVGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR+ GS G  Q PG+VFK KKMAG+MG  +VTV+NL++
Sbjct: 121 FQGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQMGNAQVTVQNLKI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LV G VPGA     + ++ + K+
Sbjct: 181 VRVDAERNLLLVSGAVPGATGGDVV-IKPAVKA 212


>gi|111023096|ref|YP_706068.1| 50S ribosomal protein L3 [Rhodococcus jostii RHA1]
 gi|226365595|ref|YP_002783378.1| 50S ribosomal protein L3 [Rhodococcus opacus B4]
 gi|123339772|sp|Q0S3H6|RL3_RHOSR RecName: Full=50S ribosomal protein L3
 gi|254803687|sp|C1B012|RL3_RHOOB RecName: Full=50S ribosomal protein L3
 gi|110822626|gb|ABG97910.1| 50S ribosomal protein L3 [Rhodococcus jostii RHA1]
 gi|226244085|dbj|BAH54433.1| 50S ribosomal protein L3 [Rhodococcus opacus B4]
          Length = 218

 Score =  262 bits (669), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 88/214 (41%), Positives = 123/214 (57%), Gaps = 2/214 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   R +PVTV+      V   RT +++GY AVQ+  G    + V+
Sbjct: 7   KGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQIRTEERDGYSAVQLAFGAIDPRKVN 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V+P++ + E RV  D     VG   +   F  G  VDVTG + GKGF+G
Sbjct: 67  KPTSGQFAKAGVTPRRHVVELRV-ADTSEYEVGQELTAEVFEDGAYVDVTGTSKGKGFAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G  A+HG    HR  GS G    PGRVFK  +M+GRMG +R+T +NL V  V
Sbjct: 126 TMKRHGFAGQGASHGAQAVHRRPGSIGGCATPGRVFKGMRMSGRMGSDRITTQNLSVHKV 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           D + GL+L+KG +PG +K   ++V+ + K     
Sbjct: 186 DAENGLLLIKGAIPG-RKGGLVIVKSAVKGGARA 218


>gi|284034002|ref|YP_003383933.1| 50S ribosomal protein L3 [Kribbella flavida DSM 17836]
 gi|283813295|gb|ADB35134.1| ribosomal protein L3 [Kribbella flavida DSM 17836]
          Length = 218

 Score =  262 bits (669), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 94/212 (44%), Positives = 128/212 (60%), Gaps = 2/212 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT  ++   R +PVTV+    C V   RT   +GY  VQ+  G+   + V+K
Sbjct: 9   GLLGTKLGMTQTWDENNRVVPVTVIQAGPCVVTEVRTSASHGYDGVQIAFGDIDPRKVTK 68

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+RG F    V+P++ L E R   D     +G       F  G++VDV+  + GKGF+G 
Sbjct: 69  PLRGHFEKAGVTPRRHLLELR-TADASEYTLGQEIKAEAFAAGEVVDVSATSKGKGFAGV 127

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GLRATHGV   HRS GS G    PGRVFK  +MAGRMG  +VT +N++V ++D
Sbjct: 128 MKRHGFHGLRATHGVHKKHRSPGSIGGCATPGRVFKGLRMAGRMGNEQVTTQNVKVHAID 187

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            +RGLIL+KG VPG  K   +L+R++ K A  
Sbjct: 188 AERGLILIKGAVPGP-KGGLVLIRNAAKGASK 218


>gi|170748636|ref|YP_001754896.1| 50S ribosomal protein L3 [Methylobacterium radiotolerans JCM 2831]
 gi|226730535|sp|B1LWS6|RL3_METRJ RecName: Full=50S ribosomal protein L3
 gi|170655158|gb|ACB24213.1| ribosomal protein L3 [Methylobacterium radiotolerans JCM 2831]
          Length = 241

 Score =  262 bits (669), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 132/216 (61%), Positives = 159/216 (73%), Gaps = 2/216 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  +PVTVL +D CQVV HRT++KNGY+A+QVG G+AKVKN
Sbjct: 1   MRSGVIAQKVGMTRVFTDAGEHVPVTVLKIDQCQVVAHRTVEKNGYVALQVGVGKAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS   RG F+   V PKKKL EFRV +D  L+PVG+  +  +F  GQ VDVTG T GKGF
Sbjct: 61  VSAAERGRFAVAKVEPKKKLAEFRVTED-ALIPVGAEITADHFIPGQFVDVTGTTTGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G  RVT +NL VV
Sbjct: 120 AGGIKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
             D +RGLILV+G VPG     WI +RD+ K  +  
Sbjct: 180 RTDPERGLILVEGAVPGVA-GGWIQIRDAVKRKLPA 214


>gi|157148900|ref|YP_001456219.1| 50S ribosomal protein L3 [Citrobacter koseri ATCC BAA-895]
 gi|166233131|sp|A8AQM0|RL3_CITK8 RecName: Full=50S ribosomal protein L3
 gi|157086105|gb|ABV15783.1| hypothetical protein CKO_04738 [Citrobacter koseri ATCC BAA-895]
          Length = 209

 Score =  262 bits (669), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 94/210 (44%), Positives = 132/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLAEGEE-YTVGQSISVELFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA     ++V+ + K+
Sbjct: 181 DAERNLLLVKGGVPGA-TGCDLIVKPAVKA 209


>gi|167626806|ref|YP_001677306.1| 50S ribosomal protein L3 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|241667387|ref|ZP_04754965.1| 50S ribosomal protein L3 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254875936|ref|ZP_05248646.1| 50S ribosomal protein L3 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|189042845|sp|B0U0Y9|RL3_FRAP2 RecName: Full=50S ribosomal protein L3
 gi|167596807|gb|ABZ86805.1| 50S ribosomal protein L3 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|254841957|gb|EET20371.1| 50S ribosomal protein L3 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 210

 Score =  262 bits (669), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 99/212 (46%), Positives = 137/212 (64%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++  +G  IPVTV+ +++ +V   +T + +GY A+QV  G  K  N
Sbjct: 1   MSLGLVGRKCGMTRIFTEDGVSIPVTVVQVESNKVTQIKTTETDGYNAIQVTTGFKKRSN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM G ++  +V P + L+EF +    D   VG+    + F  GQ VDV G++ GKGF
Sbjct: 61  VNKPMAGHYAKASVEPGRGLWEFAIDNASD-YEVGASIDATIFEAGQKVDVRGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRHNF    ATHG S+SHR HGSTG  Q PGRVFKNKKMAG +G   VT+++LEVV
Sbjct: 120 QGGVKRHNFATQDATHGNSLSHRVHGSTGQNQTPGRVFKNKKMAGHLGSENVTIQSLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD + GL+L+KG +PG+     ++V  + KS
Sbjct: 180 RVDAENGLLLLKGGIPGSVGGD-VIVTPAVKS 210


>gi|312880372|ref|ZP_07740172.1| LSU ribosomal protein L3P [Aminomonas paucivorans DSM 12260]
 gi|310783663|gb|EFQ24061.1| LSU ribosomal protein L3P [Aminomonas paucivorans DSM 12260]
          Length = 209

 Score =  262 bits (669), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 99/209 (47%), Positives = 138/209 (66%), Gaps = 2/209 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V++ EG+ +PVTV+    C VV  RT DKN Y AVQ+G G+ K + 
Sbjct: 1   MSMGILGRKVGMTQVFDAEGKAVPVTVIEAGPCPVVEVRTPDKNQYSAVQLGFGDVKPQR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+RG+++  +V+PK+ L EFRV++       G       F  G+ VDV G++ GKGF
Sbjct: 61  LNKPVRGYYAKQDVAPKRWLREFRVEEGHGFDK-GQEVRADLFAEGETVDVIGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR +FGG  A+HG S  HR  GS+G    PG +FK K M GRMGG RVTVKNL V 
Sbjct: 120 AGVIKRFHFGGGPASHGASKFHRQPGSSGASSYPGHIFKGKTMPGRMGGERVTVKNLRVF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +VD +  LIL++G VPGA K+  +L+R +
Sbjct: 180 AVDVENNLILLRGAVPGA-KDGLVLIRKT 207


>gi|150015043|ref|YP_001307297.1| 50S ribosomal protein L3 [Clostridium beijerinckii NCIMB 8052]
 gi|189042837|sp|A6LPR1|RL3_CLOB8 RecName: Full=50S ribosomal protein L3
 gi|149901508|gb|ABR32341.1| ribosomal protein L3 [Clostridium beijerinckii NCIMB 8052]
          Length = 209

 Score =  262 bits (669), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 86/212 (40%), Positives = 127/212 (59%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ RK+GMT +++ +G+ IPVTV+    C VV  +TL+ +GY A+QVG  E + K 
Sbjct: 1   MKKAIIGRKVGMTQIFDEKGKVIPVTVVEAGPCVVVQKKTLENDGYEAIQVGFDEIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G F+    + ++ L EFR+  D     VG+      F  G  VDV+ ++ GKGF
Sbjct: 61  ANKPRKGHFAKAGATLRRTLKEFRLD-DISQYEVGNEIKADVFGAGDKVDVSAVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G++KR N      THG S  HR+ GS G   DP R FKNK+M G MG    TV NLEVV
Sbjct: 120 QGSIKRWNQQRGPMTHG-SKFHRAPGSMGASSDPSRTFKNKRMPGHMGSVNTTVLNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ LIL+KG +PG  K + + ++D+ ++
Sbjct: 179 KVIAEKNLILIKGGIPGPNKGTVV-IKDTVRA 209


>gi|119478132|ref|ZP_01618211.1| 50S ribosomal protein L3 [marine gamma proteobacterium HTCC2143]
 gi|119448838|gb|EAW30081.1| 50S ribosomal protein L3 [marine gamma proteobacterium HTCC2143]
          Length = 214

 Score =  262 bits (669), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 103/211 (48%), Positives = 134/211 (63%), Gaps = 1/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT V+  +G  IPVTV+ +   +V   +T + +GY A QV AG  K   
Sbjct: 1   MTIGLVGRKSGMTRVFTDDGISIPVTVIEVSPNRVTSVKTGESDGYSAFQVTAGARKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK   G F+  +V   + L+EFR++  D+   VG+  + S F VGQ VDVTG + GKGF
Sbjct: 61  VSKAEAGQFAKASVEAGRGLWEFRLEDGDEAPVVGAELTVSTFEVGQKVDVTGQSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF    ATHG SISHRS+GS G  Q PGRVFK KKM+G MG  RVT++ LEVV
Sbjct: 121 QGGIKRWNFQMQDATHGNSISHRSNGSIGQCQTPGRVFKGKKMSGHMGAERVTIQTLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD+ R L+L+KG +PGA     ++VR + K
Sbjct: 181 RVDEARNLLLIKGAIPGAPGGD-VIVRPATK 210


>gi|269837066|ref|YP_003319294.1| 50S ribosomal protein L3 [Sphaerobacter thermophilus DSM 20745]
 gi|269786329|gb|ACZ38472.1| ribosomal protein L3 [Sphaerobacter thermophilus DSM 20745]
          Length = 216

 Score =  262 bits (669), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 98/221 (44%), Positives = 131/221 (59%), Gaps = 5/221 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT ++N  G+ IPVTVL +  C V   +T +++GY AVQ+G G  K   
Sbjct: 1   MIHGLLGKKLGMTQIFNEAGQAIPVTVLEVGPCVVTQVKTRERDGYEAVQLGFGHKK--R 58

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P RG   +    P + L E +    ++   VG V   S F  G+ VDVTG + G+GF
Sbjct: 59  LNQPERGHLRASGAQP-RYLREVKADNIEE-YSVGQVIDCSVFKEGERVDVTGTSKGRGF 116

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRH FGG  ATHG S   R+ GS G    PGRVFK  +MAG MG  RVTV+NLEVV
Sbjct: 117 AGVMKRHGFGGGPATHGQSDRKRAPGSIGASATPGRVFKGLRMAGHMGNQRVTVQNLEVV 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
            VD +R ++LV+G VPGA     +LVR + K         S
Sbjct: 177 RVDPERNVVLVRGSVPGAN-GQLVLVRRAVKYRERAAAAAS 216


>gi|260362276|ref|ZP_05775243.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus K5030]
 gi|308111331|gb|EFO48871.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus K5030]
          Length = 200

 Score =  262 bits (669), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 89/190 (46%), Positives = 121/190 (63%), Gaps = 1/190 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT V+  EG  IPVTV+ ++  +V   +TL+ +GY A+QV AG  K   V+
Sbjct: 2   IGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F+   V   + L+EFR++  ++   VG+  +   F   + VDVTG + GKGF G
Sbjct: 62  KAEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELTVELFNETKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKRGLILVK 192
           D +R L+L+K
Sbjct: 181 DAERNLLLIK 190


>gi|74316423|ref|YP_314163.1| 50S ribosomal protein L3P [Thiobacillus denitrificans ATCC 25259]
 gi|109893570|sp|Q3SLP9|RL3_THIDA RecName: Full=50S ribosomal protein L3
 gi|74055918|gb|AAZ96358.1| ribosomal protein L3 [Thiobacillus denitrificans ATCC 25259]
          Length = 214

 Score =  262 bits (669), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 99/215 (46%), Positives = 128/215 (59%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++   G  +PVTVL + N +V   RT + +GY AVQV  G  +   
Sbjct: 1   MSIGLVGRKVGMTRIFTENGASVPVTVLEMSNNRVTQVRTPENDGYSAVQVAYGSRRNSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G ++   V   + L EFRV  D       G+  S   F  GQ VDVTG+T GKG
Sbjct: 61  VNKSEAGHYAKAGVDAGELLREFRVAADVAAQYQPGAAVSVEVFQAGQKVDVTGVTQGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRHNF   RA+HG S SH   GS G  QDPGRVF  K+M+G MG    T +NLEV
Sbjct: 121 FAGTIKRHNFKSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMSGHMGAVSCTKQNLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           V VD +RGL+L+KG VPG+ K   ++VR + K   
Sbjct: 181 VRVDAERGLVLLKGAVPGS-KGGHVVVRPAVKGGA 214


>gi|331268413|ref|YP_004394905.1| 50S ribosomal protein L3 [Clostridium botulinum BKT015925]
 gi|329124963|gb|AEB74908.1| ribosomal protein L3 [Clostridium botulinum BKT015925]
          Length = 209

 Score =  262 bits (669), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 87/212 (41%), Positives = 130/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ RK+GMT +++  G+ IPVTV+    C V+  +T +K+GY A+QVG  + + K 
Sbjct: 1   MKKAIIGRKIGMTQIFDENGKVIPVTVVEAGPCAVLQKKTEEKDGYNAIQVGFEDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G F+   VS K+ + EFR++  D+   VG+      F  G  VDVTG++ GKGF
Sbjct: 61  ANKPKKGHFAKAGVSLKRIVREFRLENIDE-YEVGNEIKADVFEAGDKVDVTGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF      HG S  HR+ GS G   DP R FKNKKM G MG  + TV NLEVV
Sbjct: 120 QGTIKRWNFHRGPMAHG-SKYHRAVGSMGAASDPSRTFKNKKMPGHMGHKKSTVLNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V   + ++L+KG +PG  K  +++++++ K+
Sbjct: 179 KVMADKNVVLIKGGIPGPNKG-YVVIKNTVKA 209


>gi|227550720|ref|ZP_03980769.1| 50S ribosomal protein L3 [Enterococcus faecium TX1330]
 gi|257878725|ref|ZP_05658378.1| ribosomal protein L3 [Enterococcus faecium 1,230,933]
 gi|257881366|ref|ZP_05661019.1| ribosomal protein L3 [Enterococcus faecium 1,231,502]
 gi|257885634|ref|ZP_05665287.1| ribosomal protein L3 [Enterococcus faecium 1,231,501]
 gi|257888021|ref|ZP_05667674.1| ribosomal protein L3 [Enterococcus faecium 1,141,733]
 gi|257890584|ref|ZP_05670237.1| ribosomal protein L3 [Enterococcus faecium 1,231,410]
 gi|257893174|ref|ZP_05672827.1| ribosomal protein L3 [Enterococcus faecium 1,231,408]
 gi|257896360|ref|ZP_05676013.1| ribosomal protein L3 [Enterococcus faecium Com12]
 gi|257899334|ref|ZP_05678987.1| ribosomal protein L3 [Enterococcus faecium Com15]
 gi|258615211|ref|ZP_05712981.1| 50S ribosomal protein L3 [Enterococcus faecium DO]
 gi|260558287|ref|ZP_05830483.1| ribosomal protein L3 [Enterococcus faecium C68]
 gi|261206993|ref|ZP_05921682.1| ribosomal protein L3 [Enterococcus faecium TC 6]
 gi|289565372|ref|ZP_06445822.1| 50S ribosomal protein L3 [Enterococcus faecium D344SRF]
 gi|293379446|ref|ZP_06625590.1| 50S ribosomal protein L3 [Enterococcus faecium PC4.1]
 gi|293562946|ref|ZP_06677413.1| ribosomal protein L3 [Enterococcus faecium E1162]
 gi|293567931|ref|ZP_06679272.1| ribosomal protein L3 [Enterococcus faecium E1071]
 gi|293570684|ref|ZP_06681734.1| ribosomal protein L3 [Enterococcus faecium E980]
 gi|294615393|ref|ZP_06695266.1| ribosomal protein L3 [Enterococcus faecium E1636]
 gi|294618320|ref|ZP_06697901.1| ribosomal protein L3 [Enterococcus faecium E1679]
 gi|294621078|ref|ZP_06700269.1| ribosomal protein L3 [Enterococcus faecium U0317]
 gi|314937608|ref|ZP_07844934.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133a04]
 gi|314942893|ref|ZP_07849706.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133C]
 gi|314947971|ref|ZP_07851375.1| 50S ribosomal protein L3 [Enterococcus faecium TX0082]
 gi|314950888|ref|ZP_07853957.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133A]
 gi|314991464|ref|ZP_07856941.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133B]
 gi|314995015|ref|ZP_07860135.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133a01]
 gi|227180181|gb|EEI61153.1| 50S ribosomal protein L3 [Enterococcus faecium TX1330]
 gi|257812953|gb|EEV41711.1| ribosomal protein L3 [Enterococcus faecium 1,230,933]
 gi|257817024|gb|EEV44352.1| ribosomal protein L3 [Enterococcus faecium 1,231,502]
 gi|257821490|gb|EEV48620.1| ribosomal protein L3 [Enterococcus faecium 1,231,501]
 gi|257824075|gb|EEV51007.1| ribosomal protein L3 [Enterococcus faecium 1,141,733]
 gi|257826944|gb|EEV53570.1| ribosomal protein L3 [Enterococcus faecium 1,231,410]
 gi|257829553|gb|EEV56160.1| ribosomal protein L3 [Enterococcus faecium 1,231,408]
 gi|257832925|gb|EEV59346.1| ribosomal protein L3 [Enterococcus faecium Com12]
 gi|257837246|gb|EEV62320.1| ribosomal protein L3 [Enterococcus faecium Com15]
 gi|260075461|gb|EEW63767.1| ribosomal protein L3 [Enterococcus faecium C68]
 gi|260078621|gb|EEW66323.1| ribosomal protein L3 [Enterococcus faecium TC 6]
 gi|289162862|gb|EFD10712.1| 50S ribosomal protein L3 [Enterococcus faecium D344SRF]
 gi|291589516|gb|EFF21323.1| ribosomal protein L3 [Enterococcus faecium E1071]
 gi|291591767|gb|EFF23403.1| ribosomal protein L3 [Enterococcus faecium E1636]
 gi|291595414|gb|EFF26726.1| ribosomal protein L3 [Enterococcus faecium E1679]
 gi|291599314|gb|EFF30340.1| ribosomal protein L3 [Enterococcus faecium U0317]
 gi|291605072|gb|EFF34539.1| ribosomal protein L3 [Enterococcus faecium E1162]
 gi|291609156|gb|EFF38428.1| ribosomal protein L3 [Enterococcus faecium E980]
 gi|292641969|gb|EFF60135.1| 50S ribosomal protein L3 [Enterococcus faecium PC4.1]
 gi|313590741|gb|EFR69586.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133a01]
 gi|313593944|gb|EFR72789.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133B]
 gi|313596897|gb|EFR75742.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133A]
 gi|313598365|gb|EFR77210.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133C]
 gi|313642985|gb|EFS07565.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133a04]
 gi|313645569|gb|EFS10149.1| 50S ribosomal protein L3 [Enterococcus faecium TX0082]
          Length = 209

 Score =  262 bits (669), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 129/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY A+QVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQVKTMETDGYEAIQVGYQDMREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF+   +     VG   +   F  G ++DVTG T GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREFK-NVELGEYEVGKEITVDVFQAGDIIDVTGTTKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK++AGRMGGNRVT++NLEVV
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTIQNLEVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R +IL+KG VPGAKK S I ++ + K+
Sbjct: 178 RVDAERNVILIKGNVPGAKK-SLITIKSAVKA 208


>gi|313836021|gb|EFS73735.1| 50S ribosomal protein L3 [Propionibacterium acnes HL037PA2]
 gi|314929560|gb|EFS93391.1| 50S ribosomal protein L3 [Propionibacterium acnes HL044PA1]
 gi|314970555|gb|EFT14653.1| 50S ribosomal protein L3 [Propionibacterium acnes HL037PA3]
 gi|328906230|gb|EGG26005.1| 50S ribosomal protein L3 [Propionibacterium sp. P08]
          Length = 223

 Score =  262 bits (669), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 101/213 (47%), Positives = 132/213 (61%), Gaps = 2/213 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            GV+  KLGMT +++   + +PVTV+    C V   RT + +GY AVQ+G G  K KNV+
Sbjct: 8   KGVLGTKLGMTQLWDEHNKLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKNVT 67

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P++ L E R   D     +G   +   F+    VDVTG + GKG +G
Sbjct: 68  KPEAGHFEKAGVTPRRHLVELR-TADASEYTLGQEITAGVFSESDFVDVTGTSKGKGTAG 126

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGGLRATHGV   HRS GS G    PG+V K  +MAGRMG +RVTV+NL+V SV
Sbjct: 127 VMKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGTDRVTVQNLQVHSV 186

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           D +RG++LV+G VPG  K S ++VR + K A  
Sbjct: 187 DAERGIMLVRGAVPGP-KGSLLVVRSAAKKAAK 218


>gi|255020765|ref|ZP_05292823.1| LSU ribosomal protein L3p (L3e) [Acidithiobacillus caldus ATCC
           51756]
 gi|254969761|gb|EET27265.1| LSU ribosomal protein L3p (L3e) [Acidithiobacillus caldus ATCC
           51756]
          Length = 210

 Score =  262 bits (669), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 95/212 (44%), Positives = 137/212 (64%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT + + +GR +PVTV+ +D   +   +T +++GY AVQV  GE + + 
Sbjct: 1   MAIGLVGRKIGMTRIRSEDGRVVPVTVIQVDTNTITQIKTQERDGYTAVQVSTGERRPQR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+  + G +      P + L EFR     +   +G       F  GQ VDVTG++ GKGF
Sbjct: 61  VTSALAGHYRRAGAQPGRVLREFR-DPGLEDPQLGQEIGLDIFNTGQRVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GA+KRHNF   RA+HG S+SHR+ GS GCRQ PGRVFK KKMAG++G  +VT  NLE+V
Sbjct: 120 AGAIKRHNFRSNRASHGNSLSHRAPGSIGCRQTPGRVFKGKKMAGQLGNEQVTTLNLELV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +D +R L++VKG VPGA +   ++VR + ++
Sbjct: 180 RIDAERRLLMVKGAVPGANQGD-VIVRPAVRA 210


>gi|315640161|ref|ZP_07895283.1| 50S ribosomal protein L3 [Enterococcus italicus DSM 15952]
 gi|315484138|gb|EFU74612.1| 50S ribosomal protein L3 [Enterococcus italicus DSM 15952]
          Length = 209

 Score =  262 bits (669), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 94/212 (44%), Positives = 130/212 (61%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQLKTVENDGYEAVQVGYQDLREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF+   + + L VGS      F  G +VDVTG T GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREFK-DVELEGLEVGSEIKVDAFQAGDIVDVTGTTKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R +IL+KG VPGAKK S I ++ + K+
Sbjct: 178 RVDAERNVILIKGNVPGAKK-SLITIKSAVKA 208


>gi|189424410|ref|YP_001951587.1| 50S ribosomal protein L3 [Geobacter lovleyi SZ]
 gi|226725181|sp|B3E7T5|RL3_GEOLS RecName: Full=50S ribosomal protein L3
 gi|189420669|gb|ACD95067.1| ribosomal protein L3 [Geobacter lovleyi SZ]
          Length = 211

 Score =  262 bits (669), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 131/212 (61%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT ++  +G R+PVTV+    C V+  +T + +GY AVQVG        
Sbjct: 1   MNKGIIGKKLGMTQIFLEDGTRVPVTVVQAGPCVVLQKKTAEVDGYSAVQVGFETVNAAK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +   RG          + L E +++++ + L +G   +   F  G L+DVTG +IGKGF
Sbjct: 61  ANSADRGHCVKAGKGVFRHLRELKLEQEAE-LNIGDELTVQQFEPGDLIDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRHNF G RA+HG S  HR+ GS GC   P RVFKNKKM G+MG  RVTV+ L+VV
Sbjct: 120 QGVIKRHNFKGGRASHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQMGNERVTVQRLQVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  + LIL+KG +P + KN+ ++++DS K+
Sbjct: 179 RVDADQNLILIKGAIPDS-KNNVVVIKDSVKA 209


>gi|91791539|ref|YP_561190.1| 50S ribosomal protein L3 [Shewanella denitrificans OS217]
 gi|123061370|sp|Q12SV9|RL3_SHEDO RecName: Full=50S ribosomal protein L3
 gi|91713541|gb|ABE53467.1| LSU ribosomal protein L3P [Shewanella denitrificans OS217]
          Length = 212

 Score =  262 bits (669), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 90/213 (42%), Positives = 128/213 (60%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  IPVTV+ +   +V   +TL+ +GY A+QV  G  K   
Sbjct: 1   MAIGLIGRKVGMTRIFTEDGVSIPVTVIEVAGNRVTQVKTLETDGYRALQVTTGTKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++K   G F+   V   + L+E R+   + + + VG+  +   F     VDVTG + GKG
Sbjct: 61  ITKAEAGHFAKGGVEAGRGLWEMRLADGEGEGIEVGAELNVDIFAETVKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF     THG S++HRS+GS G  Q PGRVFK KKM+G MG  +VT +NL V
Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAEQVTTQNLHV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R LILV+G VPGA     I ++ + K+
Sbjct: 181 VRVDSERNLILVRGAVPGATNGDLI-IKPAVKA 212


>gi|94312248|ref|YP_585458.1| 50S ribosomal protein L3 [Cupriavidus metallidurans CH34]
 gi|122987810|sp|Q1LI37|RL3_RALME RecName: Full=50S ribosomal protein L3
 gi|93356100|gb|ABF10189.1| 50S ribosomal subunit protein L3 [Cupriavidus metallidurans CH34]
          Length = 214

 Score =  262 bits (669), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 90/215 (41%), Positives = 129/215 (60%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTV+ + + +V   +T + +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTDDGDSIPVTVVEVGDNRVTQIKTDETDGYTAVQVTFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + + EFR+       L  GS  S   F VGQ +DV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEVIKEFRIDAAKAAELQAGSSLSVDLFQVGQKIDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KRH+F   RATHG S SH   GS G  QDPGRVF  K+M G +G    TV+NLE+
Sbjct: 121 YAGTIKRHHFASGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDATRTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
             +D +R L+LVKG +PG+ K   ++V  + K+  
Sbjct: 181 AKIDAERKLLLVKGAIPGS-KGGKVIVTPAVKAKA 214


>gi|293115547|ref|ZP_05792032.2| 50S ribosomal protein L3 [Butyrivibrio crossotus DSM 2876]
 gi|292809408|gb|EFF68613.1| 50S ribosomal protein L3 [Butyrivibrio crossotus DSM 2876]
          Length = 240

 Score =  261 bits (668), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 90/229 (39%), Positives = 121/229 (52%), Gaps = 19/229 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58
           M+  ++A K+GMT ++N +G  +PVTVL    C V   +T++ +GY AVQVG  + K   
Sbjct: 14  MKKAILATKIGMTQIFNEDGVLVPVTVLQAGPCVVTQVKTVENDGYAAVQVGFVDKKEKI 73

Query: 59  --------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
                           V+K  +G F    VS K+ + EFR +   D   V        F 
Sbjct: 74  VNVDKNGSKEIRNRHGVTKAEKGHFDKAGVSYKRYVREFRFENAAD-YTVADEIKADIFA 132

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  +D T +  GKGF GA+KRH        HG S  HR  GS G   DP RVFK K M 
Sbjct: 133 AGDKLDATAIAKGKGFQGAIKRHGQHRGPMAHG-SKFHRHQGSNGSSSDPSRVFKGKGMP 191

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           G MG  ++TV+NLE+V VD +  LILVKG VPG KK S + ++++ KS 
Sbjct: 192 GHMGAKKITVQNLEIVKVDVENNLILVKGAVPGPKK-SLVTLKETVKSG 239


>gi|296333113|ref|ZP_06875567.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305672815|ref|YP_003864486.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296149729|gb|EFG90624.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305411058|gb|ADM36176.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 209

 Score =  261 bits (668), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 129/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  ++ + +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKSTENDGYEAIQLGFDDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    +PK+ + E R  + D    VG       F+ G++VDVTG++ GKGF
Sbjct: 61  SNKPEKGHVAKAETAPKRFVKELRGVEMDA-YEVGQEVKVEIFSAGEIVDVTGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH       +HG S  HR  GS G   DP RVFK K + GRMGG ++TV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPV-DPNRVFKGKLLPGRMGGEQITVQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGAKK S I V+ + KS
Sbjct: 178 KVDAERNLLLIKGNVPGAKK-SLITVKSAVKS 208


>gi|219849887|ref|YP_002464320.1| 50S ribosomal protein L3 [Chloroflexus aggregans DSM 9485]
 gi|254803662|sp|B8G6S5|RL3_CHLAD RecName: Full=50S ribosomal protein L3
 gi|219544146|gb|ACL25884.1| ribosomal protein L3 [Chloroflexus aggregans DSM 9485]
          Length = 210

 Score =  261 bits (668), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 128/212 (60%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GM   +  EGR IPVTV+    C V   RT +++GY AVQ+G  E + + 
Sbjct: 1   MIHGLLGRKIGMMQYFTKEGRAIPVTVIAAGPCIVTQIRTPERDGYSAVQLGYEEVEARK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G   +      + L EF         P G V +   F  GQ VD++G + G+GF
Sbjct: 61  LTKPQQGHLKASGGKMLRYLREFSADDPLAHKP-GEVVTVELFKPGQKVDISGTSKGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH F G   THG S  HR+ GS G    PGRV+K ++MAGRMGG+RVT++NLEVV
Sbjct: 120 AGVVKRHGFRGGPKTHGQSDRHRAPGSIGAGTTPGRVWKGQRMAGRMGGDRVTIQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ L+LVKG VPGA +N  + +R + K 
Sbjct: 180 EVLPEQNLLLVKGSVPGA-RNGLLQIRKAVKG 210


>gi|283788044|ref|YP_003367909.1| 50S ribosomal subunit protein L3 [Citrobacter rodentium ICC168]
 gi|282951498|emb|CBG91197.1| 50S ribosomal subunit protein L3 [Citrobacter rodentium ICC168]
          Length = 209

 Score =  261 bits (668), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 94/210 (44%), Positives = 132/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L   GY A+QV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANEGYRAIQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|118486756|gb|ABK95213.1| unknown [Populus trichocarpa]
          Length = 315

 Score =  261 bits (668), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 108/209 (51%), Positives = 143/209 (68%), Gaps = 2/209 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GVVA K GMT +++  G RIP+TVL +D+  V   +T++K G+ A+QVG G+ K K++
Sbjct: 69  RTGVVAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTVEKEGFFALQVGCGQKKEKHL 128

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F +  V  K+KL EF V +D  LLPVG+     +F  GQ VDV G+T+GKGF 
Sbjct: 129 TKPEVGHFRAQGVPMKRKLREFPVTED-ALLPVGTYVGVRHFVPGQFVDVAGITMGKGFQ 187

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F G  A+HG S+SHRS GSTG R  PG+VFK KKM GRMGG + TVKN+ V  
Sbjct: 188 GGMKRHGFKGGPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGVQRTVKNVWVYK 247

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           +D  R L+ VKG VPGA+ N ++ ++DS 
Sbjct: 248 IDPARNLMWVKGQVPGAEGN-FVFIKDSV 275


>gi|312795774|ref|YP_004028696.1| LSU ribosomal protein L3P [Burkholderia rhizoxinica HKI 454]
 gi|312167549|emb|CBW74552.1| LSU ribosomal protein L3P [Burkholderia rhizoxinica HKI 454]
          Length = 247

 Score =  261 bits (668), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 97/216 (44%), Positives = 132/216 (61%), Gaps = 2/216 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTVL + + +V   +T++ +GY AVQV  GE +   
Sbjct: 30  MSLGLVGRKVGMTRIFTADGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGERRASR 89

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR++ D    L  GSV     F VGQ VDV G++IGKG
Sbjct: 90  VTKPLAGHLAKAGVQAGEILKEFRIEADKAAELSPGSVVGVDLFEVGQKVDVQGVSIGKG 149

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NFG  RA+HG S SH   GS G  QDPGRVF  K+M G +G    T +NLE+
Sbjct: 150 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTATTQNLEI 209

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             +D +R LILVKG VPGA K   + V  + K+   
Sbjct: 210 ARIDAQRKLILVKGAVPGA-KGGKVFVTPAVKARAK 244


>gi|300933010|ref|ZP_07148266.1| 50S ribosomal protein L3 [Corynebacterium resistens DSM 45100]
          Length = 218

 Score =  261 bits (668), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 90/214 (42%), Positives = 128/214 (59%), Gaps = 2/214 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +KLGMT +++ E R +PVTV+    C V   RT + +GY AVQ+  GE   + V+
Sbjct: 7   KGILGKKLGMTQIFDDENRVVPVTVVEAGPCVVTQVRTKETDGYEAVQIAFGEIDPRKVN 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P++ + E RV +D     VG   +   F   + VDVTG+T G G++G
Sbjct: 67  KPAAGHFKKAGVTPRRHVTEIRV-EDASAYEVGQDVTVEIFNDVKFVDVTGITKGHGYAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRH F G  A+HG   +HR  G  G    PGR+FK K+MAGRMG +RVT++NL+V  V
Sbjct: 126 AMKRHGFAGQGASHGNQAAHRRVGGIGACATPGRIFKGKRMAGRMGSDRVTLQNLKVAKV 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           D +  L+LVKG VPG      ++V+ + K   + 
Sbjct: 186 DAESNLLLVKGAVPG-NNGGIVVVKTAVKGGAHA 218


>gi|194017514|ref|ZP_03056125.1| ribosomal protein L3 [Bacillus pumilus ATCC 7061]
 gi|194010786|gb|EDW20357.1| ribosomal protein L3 [Bacillus pumilus ATCC 7061]
          Length = 209

 Score =  261 bits (668), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 93/212 (43%), Positives = 126/212 (59%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T D +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVVEAAANVVLQKKTADTDGYEAIQIGFDDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    +PK+ + E R   + D   VG       F  G +VDVTG + GKGF
Sbjct: 61  SNKPEKGHVAKAETAPKRFVKELRG-AELDAYEVGQEVKVDIFANGDIVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH       THG S  HR  GS G   DP RVFK K + GRMGG ++TV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMTHG-SRYHRRPGSMGPV-DPNRVFKGKLLPGRMGGEQITVQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGAKK S + V+ + KS
Sbjct: 178 KVDAERNLLLIKGNVPGAKK-SLVTVKSAVKS 208


>gi|82701900|ref|YP_411466.1| ribosomal protein L3 [Nitrosospira multiformis ATCC 25196]
 gi|109893529|sp|Q2YAZ7|RL3_NITMU RecName: Full=50S ribosomal protein L3
 gi|82409965|gb|ABB74074.1| LSU ribosomal protein L3P [Nitrosospira multiformis ATCC 25196]
          Length = 236

 Score =  261 bits (668), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 96/219 (43%), Positives = 132/219 (60%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG   PVTVL + N +V   +T   +GY AVQV  G+ +   
Sbjct: 1   MSLGLVGRKVGMTRIFTEEGDSQPVTVLDVSNNRVTQIKTPATDGYSAVQVTFGKRRAIR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP  G F+   V   + L EFRV ++    L  G+V     F  GQ VDVTG +IGKG
Sbjct: 61  VNKPSAGHFAKAAVEAGEILREFRVAEEILGTLSPGTVIGLDIFQPGQRVDVTGTSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++GA+KRH F   RA+HG S SH   GS G  QDPGRVF  K+M G +G  R T++NLE+
Sbjct: 121 YAGAIKRHGFASNRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGNVRRTIQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           + +D +RGL+++KG +PG+ K   + V  S +SA     
Sbjct: 181 LRIDAERGLLIIKGAIPGS-KGGDVTVSPSIRSARPTNN 218


>gi|331005012|ref|ZP_08328419.1| LSU ribosomal protein L3p (L3e) [gamma proteobacterium IMCC1989]
 gi|330421178|gb|EGG95437.1| LSU ribosomal protein L3p (L3e) [gamma proteobacterium IMCC1989]
          Length = 212

 Score =  261 bits (668), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 99/211 (46%), Positives = 130/211 (61%), Gaps = 2/211 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++  +G  IPVTV+ +D  ++   ++ + +GY AVQV  G  K   
Sbjct: 1   MTIGLVGRKSGMTRIFAEDGASIPVTVIEVDPNRITQIKSTEVDGYNAVQVTVGSRKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK   G FS  N    + ++E R     +   VG   + + F VGQ VDVTG + GKGF
Sbjct: 61  VSKSAAGHFSKANTEAGRGVWELRNDA-KEAFEVGGEITVAAFEVGQKVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF    ATHG S+SHR+ GS G  Q PGRVFKNKKMAG MG  +VTV+ LEVV
Sbjct: 120 AGGVKRWNFAMQDATHGNSLSHRAPGSIGQCQTPGRVFKNKKMAGHMGAEQVTVQTLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L+L+KG VPGA     ++VR + K
Sbjct: 180 RVDSERNLLLIKGAVPGAPGGD-VIVRPATK 209


>gi|288942072|ref|YP_003444312.1| 50S ribosomal protein L3 [Allochromatium vinosum DSM 180]
 gi|288897444|gb|ADC63280.1| 50S ribosomal protein L3 [Allochromatium vinosum DSM 180]
          Length = 216

 Score =  261 bits (668), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 92/212 (43%), Positives = 128/212 (60%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GV+ RK GMT V+   G  IPVTV+ +   +V   ++ + +GY A+QV  G+ +   
Sbjct: 1   MSIGVIGRKAGMTRVFTEAGESIPVTVIEVTPNRVSQVKSEETDGYRAIQVAFGQRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KPM G ++   V   + L EFR++  +   L VG   S S F  GQ VDV G+T G+G
Sbjct: 61  VTKPMAGHYAKAGVEAGEVLREFRLEGGEGADLQVGQEISVSIFEPGQKVDVRGVTKGRG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG ++RH+F G   THG S+SHR+ GS G  Q PGRV+K KKMAG +G      +NLEV
Sbjct: 121 FSGVIRRHHFAGQDRTHGNSLSHRAPGSIGQNQTPGRVWKGKKMAGHLGAANRCQQNLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V +D +R L+LV+G VPG      +++  S K
Sbjct: 181 VRIDAERNLLLVRGGVPGPTGGRLVVL-PSVK 211


>gi|188535279|ref|YP_001909076.1| 50S ribosomal protein L3 [Erwinia tasmaniensis Et1/99]
 gi|226725174|sp|B2VK65|RL3_ERWT9 RecName: Full=50S ribosomal protein L3
 gi|188030321|emb|CAO98210.1| 50S ribosomal protein L3 [Erwinia tasmaniensis Et1/99]
          Length = 209

 Score =  261 bits (668), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 93/210 (44%), Positives = 132/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L+ +GY A+QV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKGLENDGYTAIQVTTGAKKASRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR  +  +   VG   +   F   + VDVTG + GKGF+G
Sbjct: 62  KPAAGHFAKAGVEAGRGLWEFRTAEGAEFT-VGQSINVDIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|154684634|ref|YP_001419795.1| 50S ribosomal protein L3 [Bacillus amyloliquefaciens FZB42]
 gi|166233116|sp|A7Z0N8|RL3_BACA2 RecName: Full=50S ribosomal protein L3
 gi|154350485|gb|ABS72564.1| RplC [Bacillus amyloliquefaciens FZB42]
          Length = 209

 Score =  261 bits (668), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 90/212 (42%), Positives = 130/212 (61%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQLGFDDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    +PK+ + E R   D D   +G       F+ G++VDVTG++ GKGF
Sbjct: 61  SNKPEKGHVAKAETAPKRFVKELRGV-DMDAYEIGQEVKVEIFSAGEIVDVTGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH       +HG S  HR  GS G   DP RVFK K + GRMGG+++TV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPV-DPNRVFKGKLLPGRMGGDQITVQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA+K + I V+ + KS
Sbjct: 178 KVDAERNLLLIKGNVPGARK-TLITVKSAVKS 208


>gi|326803033|ref|YP_004320851.1| 50S ribosomal protein L3 [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651005|gb|AEA01188.1| 50S ribosomal protein L3 [Aerococcus urinae ACS-120-V-Col10a]
          Length = 211

 Score =  261 bits (668), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 85/213 (39%), Positives = 124/213 (58%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT  +   G  +PVTV+      V+  +TL+ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGKKVGMTQFFTESGELVPVTVIEAQANVVLQVKTLENDGYEAVQLGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    +PK+ + EF+   +     VGS      F  G +VDVTG + GKGF
Sbjct: 61  ANKPEQGHVAKAETTPKRFIREFK-DVELGEYEVGSEVKVDIFQEGDIVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH       +HG    HR+ GS G   D  +VFK K + G+MGGN VT++NLE+V
Sbjct: 120 QGAIKRHGQQRGPMSHGSH-YHRAAGSMGMASDASKVFKGKNLPGQMGGNTVTIQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V   + +ILVKG VPGAKK S + ++ + KSA
Sbjct: 179 KVMADKNVILVKGNVPGAKK-SLVEIKTAAKSA 210


>gi|323483301|ref|ZP_08088691.1| 50S ribosomal protein L3 [Clostridium symbiosum WAL-14163]
 gi|323691201|ref|ZP_08105477.1| 50S ribosomal protein L3 [Clostridium symbiosum WAL-14673]
 gi|323403399|gb|EGA95707.1| 50S ribosomal protein L3 [Clostridium symbiosum WAL-14163]
 gi|323504720|gb|EGB20506.1| 50S ribosomal protein L3 [Clostridium symbiosum WAL-14673]
          Length = 211

 Score =  261 bits (668), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 90/213 (42%), Positives = 125/213 (58%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G   PVTVL    C V   +T++ +GY AVQVG  + + K 
Sbjct: 1   MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTVENDGYKAVQVGFVDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F    V+ K+ + EFR +  ++   V        F  G  +DVT ++ GKGF
Sbjct: 61  VTKPVKGHFDKAGVAYKRFVREFRFENAEE-YSVKDEIKAEIFAAGDKIDVTAVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR+        HG S  HR  GS G    PGRVFK K M G MG  +VT++NLEVV
Sbjct: 120 QGAIKRYGQHRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGHMGSVKVTIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            VD    LILVKG VPG KK S + V+++ K+ 
Sbjct: 179 RVDADSNLILVKGAVPGPKK-SLVTVKETVKAG 210


>gi|225571552|ref|ZP_03780548.1| hypothetical protein CLOHYLEM_07650 [Clostridium hylemonae DSM
           15053]
 gi|225159629|gb|EEG72248.1| hypothetical protein CLOHYLEM_07650 [Clostridium hylemonae DSM
           15053]
          Length = 226

 Score =  261 bits (668), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 88/228 (38%), Positives = 125/228 (54%), Gaps = 19/228 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G   PVTVL    C V   +T + +GY AVQVG  + K K 
Sbjct: 1   MKKAILATKVGMTQIFNEDGTLTPVTVLQAGPCVVTQVKTAENDGYDAVQVGFVDKKEKT 60

Query: 61  VSK----------------PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
           V+K                  +G F+   VS K+ + EF+ +   +   +        F 
Sbjct: 61  VNKDKSGKKEIVHRHGVTKAEQGHFAKAGVSGKRFVREFKFENASE-YELAQEIKADIFE 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  +D T ++ GKGF GA+KRHN      THG S  HR  GS G   DP +VFK KKM 
Sbjct: 120 AGDKIDATAVSKGKGFQGAIKRHNQHRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           G MG  ++T++NLEVV VD +  L+LVKG VPG KK S + ++++ K+
Sbjct: 179 GHMGSKKITIQNLEVVRVDAENNLLLVKGSVPGPKK-SLVTIKEAVKA 225


>gi|157690900|ref|YP_001485362.1| 50S ribosomal protein L3 [Bacillus pumilus SAFR-032]
 gi|166989380|sp|A8F985|RL3_BACP2 RecName: Full=50S ribosomal protein L3
 gi|157679658|gb|ABV60802.1| ribosomal protein L3 [Bacillus pumilus SAFR-032]
          Length = 209

 Score =  261 bits (668), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 93/212 (43%), Positives = 126/212 (59%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T D +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVVEAAANVVLQKKTTDTDGYEAIQIGFDDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    +PK+ + E R   + D   VG       F  G +VDVTG + GKGF
Sbjct: 61  SNKPEKGHVAKAETAPKRFVKELRG-AELDAYEVGQEVKVDIFANGDIVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH       THG S  HR  GS G   DP RVFK K + GRMGG ++TV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMTHG-SRYHRRPGSMGPV-DPNRVFKGKLLPGRMGGEQITVQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGAKK S + V+ + KS
Sbjct: 178 KVDAERNLLLIKGNVPGAKK-SLVTVKSAVKS 208


>gi|238763730|ref|ZP_04624689.1| 50S ribosomal protein L3 [Yersinia kristensenii ATCC 33638]
 gi|238698032|gb|EEP90790.1| 50S ribosomal protein L3 [Yersinia kristensenii ATCC 33638]
          Length = 209

 Score =  261 bits (668), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 93/210 (44%), Positives = 130/210 (61%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   ++L+ +GY AVQV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYRAVQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+ FR+ +  +    G   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWGFRLPEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG +G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   + I V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGATGGNLI-VKPAVKA 209


>gi|209548935|ref|YP_002280852.1| 50S ribosomal protein L3 [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|226730555|sp|B5ZYT5|RL3_RHILW RecName: Full=50S ribosomal protein L3
 gi|209534691|gb|ACI54626.1| ribosomal protein L3 [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 213

 Score =  261 bits (668), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 146/215 (67%), Positives = 171/215 (79%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  +PVTVL +D CQVV  RT++KNGY AVQ+GAG+AKVKN
Sbjct: 1   MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMDGCQVVATRTVEKNGYTAVQLGAGQAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+  NV PK K+ EFRV +D  LL +G+     +F  GQLVDVTG TIGKGF
Sbjct: 61  TSKAMRGNFAVANVEPKAKVAEFRVSEDQ-LLEIGTEIKAGHFAAGQLVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           S D+ RGLIL+KG VPG+ K +WI+VRD+ KSA  
Sbjct: 180 STDEDRGLILIKGAVPGS-KGAWIIVRDAVKSAAK 213


>gi|182436627|ref|YP_001824346.1| 50S ribosomal protein L3 [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|326777249|ref|ZP_08236514.1| 50S ribosomal protein L3 [Streptomyces cf. griseus XylebKG-1]
 gi|226730571|sp|B1W407|RL3_STRGG RecName: Full=50S ribosomal protein L3
 gi|178465143|dbj|BAG19663.1| putative 50S ribosomal protein L3 [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326657582|gb|EGE42428.1| 50S ribosomal protein L3 [Streptomyces cf. griseus XylebKG-1]
          Length = 214

 Score =  261 bits (667), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 98/211 (46%), Positives = 128/211 (60%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            GV+  KLGMT V++   R +PVTV+    C V   RT D +GY AVQ+  GE   + V+
Sbjct: 6   KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G
Sbjct: 66  KPLKGHFAKADVTPRRHLVELR-TPDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL + +V
Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+L+KG VPG      +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214


>gi|313903151|ref|ZP_07836545.1| LSU ribosomal protein L3P [Thermaerobacter subterraneus DSM 13965]
 gi|313466653|gb|EFR62173.1| LSU ribosomal protein L3P [Thermaerobacter subterraneus DSM 13965]
          Length = 217

 Score =  261 bits (667), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 98/210 (46%), Positives = 134/210 (63%), Gaps = 3/210 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RKLGMT +++ EGR +PVTV+    C VV  RT +++GY AVQ+G GE K + 
Sbjct: 1   MGVGLLGRKLGMTQIFDDEGRAVPVTVIQAGPCVVVQTRTQERDGYRAVQLGFGEIKPRK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP-VGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KPM G F+   V+P + L EFR++ + + +P VG   +   F  G+ VDVTG + GKG
Sbjct: 61  VNKPMAGHFARAGVNPVRVLREFRLEGEGEPMPEVGQQLTVELFKAGEYVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G + RH FG    +HG S  HR  GS      PGRVFK ++MAGR G  RVTV+ L+V
Sbjct: 121 FLGPVARHGFGRGPMSHG-SKYHRGPGSLAPSTFPGRVFKGRRMAGRTGNRRVTVRGLQV 179

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           V VD +R L+LVKG VPG  + S + +R +
Sbjct: 180 VRVDPERNLLLVKGAVPGP-RGSVVAIRKT 208


>gi|259909999|ref|YP_002650355.1| 50S ribosomal protein L3 [Erwinia pyrifoliae Ep1/96]
 gi|292489849|ref|YP_003532739.1| 50S ribosomal protein L3 [Erwinia amylovora CFBP1430]
 gi|292900891|ref|YP_003540260.1| 50S ribosomal protein L3 [Erwinia amylovora ATCC 49946]
 gi|224965621|emb|CAX57153.1| 50S ribosomal protein L3 [Erwinia pyrifoliae Ep1/96]
 gi|283480096|emb|CAY76012.1| 50S ribosomal protein L3 [Erwinia pyrifoliae DSM 12163]
 gi|291200739|emb|CBJ47872.1| 50S ribosomal subunit protein L3 [Erwinia amylovora ATCC 49946]
 gi|291555286|emb|CBA23589.1| 50S ribosomal protein L3 [Erwinia amylovora CFBP1430]
 gi|310765598|gb|ADP10548.1| 50S ribosomal protein L3 [Erwinia sp. Ejp617]
 gi|312174031|emb|CBX82284.1| 50S ribosomal protein L3 [Erwinia amylovora ATCC BAA-2158]
          Length = 209

 Score =  261 bits (667), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 93/210 (44%), Positives = 132/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L+ +GY A+QV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKGLENDGYTAIQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR  +  +   VG   +   F   + VDVTG + GKGF+G
Sbjct: 62  KPAAGHFAKAGVEAGRGLWEFRTAEGAEFT-VGQSINVDIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209


>gi|119899706|ref|YP_934919.1| 50S ribosomal protein L3 [Azoarcus sp. BH72]
 gi|166233115|sp|A1KB27|RL3_AZOSB RecName: Full=50S ribosomal protein L3
 gi|119672119|emb|CAL96033.1| 50S ribosomal protein L3 [Azoarcus sp. BH72]
          Length = 212

 Score =  261 bits (667), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 104/213 (48%), Positives = 137/213 (64%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +GR IPVTVL + + +V   +T + +GY AVQV  G+ +   
Sbjct: 1   MSLGLVGRKVGMTRIFADDGRSIPVTVLDVSDNKVTQIKTPEADGYSAVQVAFGKRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V KP+ G  +   V P + L EFRV+ +    L  G   S   F+VGQ VDVTG++IGKG
Sbjct: 61  VVKPIAGHLAKAGVEPSRVLKEFRVEPEGLASLKAGDQVSVEIFSVGQKVDVTGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNF   RA+HG S+SH S GS G  QDPGRVF  K+MAG+ G  + T   LEV
Sbjct: 121 FSGPIKRHNFSSNRASHGNSVSHNSPGSIGMAQDPGRVFPGKRMAGQYGAVQRTTLGLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LVKG VPGA K   ++VR + K+
Sbjct: 181 VRVDAERQLLLVKGAVPGA-KGGDVVVRPAIKA 212


>gi|308172007|ref|YP_003918712.1| 50S ribosomal protein L3 (BL3) [Bacillus amyloliquefaciens DSM 7]
 gi|307604871|emb|CBI41242.1| ribosomal protein L3 (BL3) [Bacillus amyloliquefaciens DSM 7]
 gi|328551817|gb|AEB22309.1| 50S ribosomal protein L3 [Bacillus amyloliquefaciens TA208]
 gi|328910077|gb|AEB61673.1| ribosomal protein L3 (BL3) [Bacillus amyloliquefaciens LL3]
          Length = 209

 Score =  261 bits (667), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 130/212 (61%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQLGFDDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    +PK+ + E R   D D   +G       F+ G++VDVTG++ GKGF
Sbjct: 61  SNKPEKGHVAKAETAPKRFVKELRGV-DMDAYEIGQEVKVEIFSAGEIVDVTGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH       +HG S  HR  GS G   DP RVFK K + GRMGG+++TV+NLEVV
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPV-DPNRVFKGKLLPGRMGGDQITVQNLEVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA+K + I V+ + KS
Sbjct: 178 KVDAERNLLLIKGNVPGARK-ALITVKSAVKS 208


>gi|157372776|ref|YP_001480765.1| 50S ribosomal protein L3 [Serratia proteamaculans 568]
 gi|166990940|sp|A8GKJ7|RL3_SERP5 RecName: Full=50S ribosomal protein L3
 gi|157324540|gb|ABV43637.1| ribosomal protein L3 [Serratia proteamaculans 568]
          Length = 209

 Score =  261 bits (667), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 129/210 (61%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +KLGMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+
Sbjct: 2   IGLVGKKLGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTTGSKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR  + ++    G   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRTAEGEEFT-AGQNISVEIFAEVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG +G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   + I V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGATGGNLI-VKPAVKA 209


>gi|2113866|emb|CAA73672.1| rplC [Mycobacterium bovis BCG]
          Length = 217

 Score =  261 bits (667), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 91/214 (42%), Positives = 124/214 (57%), Gaps = 3/214 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   R  PVTV+      V   RT +++GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDESNRVAPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP+ G +++  V+P++ L E R+   D      VG   +   F  G  VDVTG + GKG
Sbjct: 63  NKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKRH F G  A+HG    HR  GS G    P RVFK  +MAGRMG +RVTV NL V
Sbjct: 123 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLV 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             VD + G++L+KG VPG +    ++VR + K  
Sbjct: 183 HKVDAENGVLLIKGAVPG-RTGGLVMVRSAIKRG 215


>gi|251793827|ref|YP_003008559.1| 50S ribosomal protein L3 [Aggregatibacter aphrophilus NJ8700]
 gi|247535226|gb|ACS98472.1| ribosomal protein L3 [Aggregatibacter aphrophilus NJ8700]
          Length = 208

 Score =  261 bits (667), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 97/210 (46%), Positives = 132/210 (62%), Gaps = 3/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V RK+GMT ++N +G  +PVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+
Sbjct: 2   IGLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKASRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V   + L+EFR + ++    +G   +   F   + VDVTG + GKGF G
Sbjct: 62  KPEVGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV V
Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S ++V+ + K+
Sbjct: 180 DAERKLLLVKGAVPGA-TGSDVIVKPAVKA 208


>gi|307106714|gb|EFN54959.1| hypothetical protein CHLNCDRAFT_48876 [Chlorella variabilis]
          Length = 234

 Score =  261 bits (667), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 107/209 (51%), Positives = 141/209 (67%), Gaps = 2/209 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT  ++  G R+P+TVL +D+CQVV  +T DK GY A+Q+G+G  + K +   +RG F +
Sbjct: 1   MTQEWDAWGVRVPLTVLWVDDCQVVQVKTDDKEGYTALQLGSGSKRPKQLRGTLRGHFDA 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             V+PK++L EFRV  D  LLPVG     S+F  GQ VDVTG +IGKGF G MKR  F G
Sbjct: 61  AGVAPKRRLAEFRVSPD-ALLPVGHELRASHFVAGQFVDVTGTSIGKGFQGVMKRWGFAG 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
             A+HG S++HR+ GSTG  QDPG+VFK KKM GRMGG RVTV+N +V  VD  R L+ V
Sbjct: 120 QPASHGNSLAHRAAGSTGACQDPGKVFKGKKMPGRMGGERVTVQNNQVFRVDPLRNLLYV 179

Query: 192 KGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
           +G VPG  K +++LVRDS K  +  +  +
Sbjct: 180 RGHVPG-HKGNFVLVRDSAKKTLEQQPPL 207


>gi|253995718|ref|YP_003047782.1| 50S ribosomal protein L3 [Methylotenera mobilis JLW8]
 gi|253982397|gb|ACT47255.1| ribosomal protein L3 [Methylotenera mobilis JLW8]
          Length = 216

 Score =  261 bits (667), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 86/212 (40%), Positives = 126/212 (59%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  +G  +PVTVL +   +V   +T   +GY  +QV  G  +   
Sbjct: 1   MSLGLIGRKVGMTRVFTEDGASVPVTVLEVVPNRVTQIKTTASDGYTGLQVAYGTRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++K + G ++    +    + EF V  D       G+  +   F  GQ VDVTG ++GKG
Sbjct: 61  INKALTGHYAKSGSAAGAGIHEFSVGDDVLANYTPGANITVDIFQAGQKVDVTGTSLGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+GA+KRH+F   RA+HG S SH   GS G  QDPGRVF  K+M G +G  +VT +NLE+
Sbjct: 121 FAGAIKRHHFSSNRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMPGHLGAVKVTTQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+L+KG +PG+ K   ++VR + K
Sbjct: 181 VRVDVERNLLLIKGAIPGS-KGGDVVVRPAIK 211


>gi|225016285|ref|ZP_03705477.1| hypothetical protein CLOSTMETH_00188 [Clostridium methylpentosum
           DSM 5476]
 gi|224950960|gb|EEG32169.1| hypothetical protein CLOSTMETH_00188 [Clostridium methylpentosum
           DSM 5476]
          Length = 211

 Score =  261 bits (667), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 84/213 (39%), Positives = 126/213 (59%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT +++  G+ IPVTV+    C VV  +T++ +GY AVQVG  + K   
Sbjct: 1   MKKAIIGKKVGMTQIFDENGKVIPVTVVEAGPCVVVQKKTVENDGYEAVQVGFSDLKPHK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP  G F+  + +PK+ L EFR+ +D   L +G +     F  G +VDV G + GKGF
Sbjct: 61  VNKPTAGHFAKADAAPKRHLKEFRL-EDCASLNLGDLIKADVFAEGDIVDVCGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR+    L+A+HG     R  GS G   DP R+ K KKM G+MG   VT++NL VV
Sbjct: 120 AGTIKRYGNASLKASHGTGPVGRHAGSMGAASDPSRIPKGKKMPGQMGNETVTIQNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            VD +  LI ++G +PG      + + +S K A
Sbjct: 180 KVDAENNLIALRGAIPGPN-GGIVTIANSVKKA 211


>gi|187934203|ref|YP_001884473.1| 50S ribosomal protein L3 [Clostridium botulinum B str. Eklund 17B]
 gi|188590013|ref|YP_001919672.1| 50S ribosomal protein L3 [Clostridium botulinum E3 str. Alaska E43]
 gi|251780648|ref|ZP_04823568.1| 50S ribosomal protein L3 [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|226725151|sp|B2UYB0|RL3_CLOBA RecName: Full=50S ribosomal protein L3
 gi|226725152|sp|B2TIH5|RL3_CLOBB RecName: Full=50S ribosomal protein L3
 gi|187722356|gb|ACD23577.1| 50S ribosomal protein L3 [Clostridium botulinum B str. Eklund 17B]
 gi|188500294|gb|ACD53430.1| 50S ribosomal protein L3 [Clostridium botulinum E3 str. Alaska E43]
 gi|243084963|gb|EES50853.1| 50S ribosomal protein L3 [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 209

 Score =  261 bits (667), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 88/212 (41%), Positives = 128/212 (60%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT ++N  G+ IPVTV+    C VV  +T++K+GY A+QVG G+ + K 
Sbjct: 1   MKKAIMGKKIGMTQIFNEAGKVIPVTVVEAGPCVVVQKKTVEKDGYEAIQVGFGDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G F    V  K+ L EFR+ +D     VG       F +G  +DV+G++ GKGF
Sbjct: 61  VNKPAKGHFEKAGVVLKRTLKEFRL-EDVSQYEVGQEIKADVFEIGDKIDVSGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR N      THG S   R+ GS G   DP R FKNK+M G MG    TV NLEVV
Sbjct: 120 QGVIKRWNQQRGPMTHG-SKFKRAPGSMGASSDPSRTFKNKRMPGHMGCVNTTVMNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ L+L+KG +PG  K + + +R++ K+
Sbjct: 179 KVIAEKNLLLIKGGIPGPNKGTVV-IRNAVKA 209


>gi|291542035|emb|CBL15145.1| LSU ribosomal protein L3P [Ruminococcus bromii L2-63]
          Length = 210

 Score =  261 bits (667), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 90/212 (42%), Positives = 130/212 (61%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT +++ +G  IPVTV+    C V   +T++ +GY +VQ+G G+ K   
Sbjct: 1   MQKAIIGKKIGMTQIFDEKGIMIPVTVVEAGPCVVTAKKTVENDGYASVQLGYGDVKPHK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+GFF    V+PKK L EFR   D D   +G +     FT G  +DVTG + GKG 
Sbjct: 61  VNKPMKGFFDKAGVAPKKTLKEFRFT-DTDAYSIGDLVKADVFTPGDKIDVTGKSKGKGT 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF  L+ +HG     R  GS G    P RV+K K+MAG +G  +VTV+NL VV
Sbjct: 120 AGVIKRWNFHRLKESHGTGPCVRHGGSIGACSSPSRVWKGKRMAGHLGAEQVTVQNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  LI VKG +PG  K   ++++DS K+
Sbjct: 180 KVDAENNLIAVKGAIPGPNKG-IVVIKDSVKA 210


>gi|148827966|ref|YP_001292719.1| 50S ribosomal protein L3 [Haemophilus influenzae PittGG]
 gi|166233148|sp|A5UHT0|RL3_HAEIG RecName: Full=50S ribosomal protein L3
 gi|148719208|gb|ABR00336.1| 50S ribosomal protein L3 [Haemophilus influenzae PittGG]
          Length = 208

 Score =  261 bits (667), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 97/210 (46%), Positives = 132/210 (62%), Gaps = 3/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V RK+GMT ++N +G  +PVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+
Sbjct: 2   IGLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V   + L+EFR + ++    +G   +   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G  RVTV++LEVV V
Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA  N  ++V+ + K+
Sbjct: 180 DAERKLLLVKGSVPGAI-NGNVIVKPAVKA 208


>gi|186477588|ref|YP_001859058.1| 50S ribosomal protein L3 [Burkholderia phymatum STM815]
 gi|226725142|sp|B2JIG6|RL3_BURP8 RecName: Full=50S ribosomal protein L3
 gi|184194047|gb|ACC72012.1| ribosomal protein L3 [Burkholderia phymatum STM815]
          Length = 219

 Score =  261 bits (667), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 95/212 (44%), Positives = 127/212 (59%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGTRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EF++       L  G+V     F VGQ VDV G +IGKG
Sbjct: 61  VTKPLAGHLAKAGVQAGEILKEFQIDAAKAAELSSGAVIGVDLFEVGQKVDVQGTSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RA+HG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             +D  R L+LVKG VPGA K   + V  + K
Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211


>gi|56418641|ref|YP_145959.1| 50S ribosomal protein L3 [Geobacillus kaustophilus HTA426]
 gi|261417607|ref|YP_003251289.1| 50S ribosomal protein L3 [Geobacillus sp. Y412MC61]
 gi|297528482|ref|YP_003669757.1| 50S ribosomal protein L3 [Geobacillus sp. C56-T3]
 gi|319765265|ref|YP_004130766.1| 50S ribosomal protein L3 [Geobacillus sp. Y412MC52]
 gi|81819840|sp|Q5L3Z7|RL3_GEOKA RecName: Full=50S ribosomal protein L3
 gi|56378483|dbj|BAD74391.1| 50S ribosomal protein L3 [Geobacillus kaustophilus HTA426]
 gi|261374064|gb|ACX76807.1| 50S ribosomal protein L3 [Geobacillus sp. Y412MC61]
 gi|297251734|gb|ADI25180.1| 50S ribosomal protein L3 [Geobacillus sp. C56-T3]
 gi|317110131|gb|ADU92623.1| 50S ribosomal protein L3 [Geobacillus sp. Y412MC52]
          Length = 213

 Score =  261 bits (667), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 86/204 (42%), Positives = 121/204 (59%), Gaps = 3/204 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++   G  IPVTV+H     V+  +T++ +GY A+Q+G  +   K 
Sbjct: 1   MTKGILGRKIGMTQIFAENGDLIPVTVIHATPNVVLQKKTIENDGYEAIQLGFEDISEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP  G  +  N +PK+ + E R    D+   VG       F+ G++VDVTG++ GKGF
Sbjct: 61  ANKPQIGHAAKANTAPKRFIREIRGANIDE-YEVGQEVKVDIFSEGEIVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    P RVFK K + GRMGG RVT++NL++V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGSIA-PNRVFKTKNLPGRMGGERVTIQNLKIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWI 204
            VD +R L+L+KG VPG +K   I
Sbjct: 178 KVDPERNLLLIKGNVPGPRKGLVI 201


>gi|325663062|ref|ZP_08151512.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 4_1_37FAA]
 gi|331086669|ref|ZP_08335746.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|325470516|gb|EGC73746.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 4_1_37FAA]
 gi|330409835|gb|EGG89270.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 226

 Score =  261 bits (667), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 92/228 (40%), Positives = 126/228 (55%), Gaps = 19/228 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G   PVTVL    C V   +T++ +GY AVQVG  + K K 
Sbjct: 1   MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQIKTVENDGYSAVQVGFVDKKDKI 60

Query: 61  VS----------------KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
           V+                K  +G F    VS K+ + EF+ +  D+   +        F 
Sbjct: 61  VNVDKNGKKTIVHRHGTTKAEKGHFDKAGVSSKRFVREFKFENADEF-ELAQEIKADIFA 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  VD T ++ GKGF GA+KRHN      THG S  HR  GS G   DP +VFK KKM 
Sbjct: 120 AGDKVDATAISKGKGFQGAIKRHNQHRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           G MG  R+T++NLE+V VD +  LILVKG VPG KK S + +++S K+
Sbjct: 179 GHMGSKRITIQNLEIVRVDAENNLILVKGSVPGPKK-SLVTIKESVKA 225


>gi|237728655|ref|ZP_04559136.1| 50S ribosomal protein L3 [Citrobacter sp. 30_2]
 gi|226909277|gb|EEH95195.1| 50S ribosomal protein L3 [Citrobacter sp. 30_2]
          Length = 209

 Score =  261 bits (667), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 131/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+  D +   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRL-ADGEEYTVGQNISVELFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA     ++V+ + K+
Sbjct: 181 DAERNLLLVKGGVPGA-TGCDLIVKPAVKA 209


>gi|225432181|ref|XP_002268657.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297736812|emb|CBI26013.3| unnamed protein product [Vitis vinifera]
          Length = 307

 Score =  261 bits (667), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 103/215 (47%), Positives = 141/215 (65%), Gaps = 2/215 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G +A K GM+ +++  G R+P+TVL LD+  V   +T +K G  A+QVG G+ K K++
Sbjct: 59  RTGAIAVKCGMSALWDKWGARVPITVLWLDDNIVSQVKTFEKEGLNALQVGCGQKKAKHL 118

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F +  V  K+KL EF V +D  LLPVG+     +F  GQ VDVTG+T GKGF 
Sbjct: 119 TKPEVGHFRAQGVPLKRKLREFPVTED-ALLPVGTTIGVRHFVPGQYVDVTGITRGKGFQ 177

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR  F G+ A+HG S+SHRS GSTG R  PG+VFK KKM GRMGG + TVKN+ V  
Sbjct: 178 GGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGKQRTVKNVWVYK 237

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           +D  R L+ V+G VPGA+ N ++ ++D+     + 
Sbjct: 238 IDPTRNLMWVRGQVPGAEGN-FVFIKDAVYKKPDA 271


>gi|283835737|ref|ZP_06355478.1| hypothetical protein CIT292_10129 [Citrobacter youngae ATCC 29220]
 gi|291068416|gb|EFE06525.1| 50S ribosomal protein L3 [Citrobacter youngae ATCC 29220]
          Length = 209

 Score =  261 bits (667), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 131/210 (62%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+  D +   VG   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFTKAGVEAGRGLWEFRL-ADGEEYTVGQSISVELFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA     ++V+ + K+
Sbjct: 181 DAERNLLLVKGGVPGA-TGCDLIVKPAVKA 209


>gi|237653996|ref|YP_002890310.1| 50S ribosomal protein L3 [Thauera sp. MZ1T]
 gi|237625243|gb|ACR01933.1| ribosomal protein L3 [Thauera sp. MZ1T]
          Length = 212

 Score =  261 bits (667), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 100/213 (46%), Positives = 138/213 (64%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G+ IPVTVL + + +V   +T+D +GY AVQ+  G+ +   
Sbjct: 1   MSLGLVGRKVGMTRIFAEDGKTIPVTVLDVSDNRVSQIKTIDTDGYAAVQIAYGKRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQ-KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++KP+ G  +   V P + + EFRV+ +    +  G       F VGQ VDVTG+TIGKG
Sbjct: 61  ITKPVAGHLAKAGVEPCRGIKEFRVEAEQAGSMNAGDAVGADLFQVGQKVDVTGVTIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNF   RA+HG SISH S GS G  QDPGRVF  K+MAG+ G  + T + LE+
Sbjct: 121 FSGPIKRHNFSSNRASHGNSISHNSPGSIGMAQDPGRVFPGKRMAGQYGNVQRTTQGLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LVKG VPGA K   ++VR + K+
Sbjct: 181 VRVDVERQLLLVKGAVPGA-KGGDVVVRPAVKA 212


>gi|121997649|ref|YP_001002436.1| ribosomal protein L3 [Halorhodospira halophila SL1]
 gi|166233149|sp|A1WVC2|RL3_HALHL RecName: Full=50S ribosomal protein L3
 gi|121589054|gb|ABM61634.1| LSU ribosomal protein L3P [Halorhodospira halophila SL1]
          Length = 216

 Score =  261 bits (667), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 103/217 (47%), Positives = 134/217 (61%), Gaps = 6/217 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT V+  EG  IPVTV+  D  +V   +T + +GY AVQV AG  K + 
Sbjct: 1   MAIGIVGRKRGMTRVFTEEGGSIPVTVVEADPNRVTQVKTEESDGYRAVQVTAGRRKPQR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQK-----DDDLLPVGSVFSPSYFTVGQLVDVTGMT 115
           V KP  G F+   V   + ++EFR+ K     D+++   G       F  GQ VDVTG T
Sbjct: 61  VRKPEAGHFARAGVEAGRGVWEFRLDKGQRASDEEMPETGGSIDVGGFEAGQKVDVTGTT 120

Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
            G+GF+G ++RHNF   R THG S SHR  GS G  Q PGRVFK KKMAG+MG  R T++
Sbjct: 121 KGRGFAGTVRRHNFRAQRNTHGNSKSHRVPGSIGQCQSPGRVFKGKKMAGQMGNRRATIQ 180

Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           NLEVV VD +R L+L++G VPGA   S ++VR + K+
Sbjct: 181 NLEVVRVDSERNLLLIRGAVPGAV-GSDLIVRPASKA 216


>gi|300779845|ref|ZP_07089701.1| 50S ribosomal protein L3 [Corynebacterium genitalium ATCC 33030]
 gi|300533955|gb|EFK55014.1| 50S ribosomal protein L3 [Corynebacterium genitalium ATCC 33030]
          Length = 217

 Score =  261 bits (667), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 87/214 (40%), Positives = 123/214 (57%), Gaps = 2/214 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RKLGMT +++ E R IPVTV+    C V   RT + +GY A+Q+  G+   +   
Sbjct: 6   KGILGRKLGMTQIFDEENRVIPVTVVEAGPCVVTQIRTEETDGYSAIQIAYGDIDPRKAK 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G +     +P++ + E R+  D     +G   + + F     VDV G T GKG++G
Sbjct: 66  KPQAGHYQKAGQNPRRHVAEIRMD-DTSAYELGQEVTVNIFDGDTFVDVAGTTKGKGYAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRH F G  A HG   +HR  GS G    PGRVFK K+MAGRMG NRVT +NL++  +
Sbjct: 125 AMKRHGFAGQGAAHGNQAAHRRVGSIGGCATPGRVFKGKRMAGRMGSNRVTTQNLKIQRI 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           D    L+L+KG +PGA K S + V+ + K   + 
Sbjct: 185 DGDSNLLLIKGAIPGA-KGSLVTVKTAVKGGAHA 217


>gi|153210324|ref|ZP_01947604.1| ribosomal protein L3 [Coxiella burnetii 'MSU Goat Q177']
 gi|212218074|ref|YP_002304861.1| 50S ribosomal protein L3 [Coxiella burnetii CbuK_Q154]
 gi|226725156|sp|B6J5D2|RL3_COXB1 RecName: Full=50S ribosomal protein L3
 gi|120575146|gb|EAX31770.1| ribosomal protein L3 [Coxiella burnetii 'MSU Goat Q177']
 gi|212012336|gb|ACJ19716.1| LSU ribosomal protein L3P [Coxiella burnetii CbuK_Q154]
          Length = 217

 Score =  261 bits (667), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 88/213 (41%), Positives = 126/213 (59%), Gaps = 1/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK GMT ++   G  IPVTV+ +   ++   +T++ +GY A QV  G+     
Sbjct: 1   MSIGLIGRKCGMTRIFTETGSSIPVTVVEVIPNRITQVKTVETDGYRAFQVAYGKKSSAR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G +S   V     L EFR+  ++      G       F  GQ+VDV G+T GKG
Sbjct: 61  VNKPLAGHYSKAAVEAGNALREFRLGNEELTEAKAGDELKVDIFKEGQVVDVRGLTRGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRHNF    ATHG S+SHR+ GS G  Q PGRV+K KKMAG++G    TV++ E+
Sbjct: 121 FAGTVKRHNFRTQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGQLGNVYCTVQSQEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           + VD +R L+L+KG +PGA     I+ + S K 
Sbjct: 181 IKVDVERNLLLIKGALPGAPGGEVIITQSSKKR 213


>gi|18401521|ref|NP_566579.1| RPL3P (RIBOSOMAL PROTEIN L3 PLASTID); structural constituent of
           ribosome [Arabidopsis thaliana]
 gi|42559534|sp|Q9LRN8|RK3B_ARATH RecName: Full=50S ribosomal protein L3-2, chloroplastic; Flags:
           Precursor
 gi|11994685|dbj|BAB02923.1| 50S ribosomal protein L3 [Arabidopsis thaliana]
          Length = 324

 Score =  261 bits (667), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 101/209 (48%), Positives = 146/209 (69%), Gaps = 2/209 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K GMT +++  G+RIP+++L +D+  V   +T++K G  A+Q+G G+ K K++
Sbjct: 76  RTGIIAVKCGMTALWDKWGKRIPISILWVDDNIVSQVKTVEKEGIFALQIGCGQKKPKHL 135

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SK + G F +  V  K+KL EF V +D  LLPVG+     +F  GQ VDVTG+T GKGF 
Sbjct: 136 SKAVVGHFRAQGVPLKRKLREFPVTED-ALLPVGTSLGVRHFVPGQYVDVTGITRGKGFQ 194

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F G+ A+HG S+SHRS GSTG R  PG+VFK +KMAGRMG ++ TVKN+ V  
Sbjct: 195 GCMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGADQRTVKNVWVYK 254

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           +D  R L+ V+G VPGA+ N ++ ++D++
Sbjct: 255 IDPARNLMWVRGQVPGAEGN-FVFIKDAW 282


>gi|83648852|ref|YP_437287.1| ribosomal protein L3 [Hahella chejuensis KCTC 2396]
 gi|109893432|sp|Q2S912|RL3_HAHCH RecName: Full=50S ribosomal protein L3
 gi|83636895|gb|ABC32862.1| Ribosomal protein L3 [Hahella chejuensis KCTC 2396]
          Length = 212

 Score =  261 bits (667), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 93/213 (43%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++  +G  +PVTV+ ++   +   ++L+ +GY A+QV +G  K   
Sbjct: 1   MAIGLVGRKAGMTRLFEDDGAAVPVTVIQVEKNVIAQVKSLEVDGYRAIQVTSGSVKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQK-DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KPM G F+   V   + + EF +   D     VG   S + F  GQ VDV+G + GKG
Sbjct: 61  VNKPMAGHFAKAGVEAGRVVCEFTLDATDSAEYKVGDEVSVTIFEAGQKVDVSGRSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KR NF    ATHG S+SHR+ GS G  Q PGRVFK KKMAG+MG   VTV+ L+V
Sbjct: 121 FAGVIKRWNFSTQDATHGNSLSHRAPGSIGQNQSPGRVFKGKKMAGQMGNKNVTVQTLKV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD+++GL+L+KG VPGA   + ++++ + K+
Sbjct: 181 VRVDEEKGLLLIKGAVPGA-TGADVVIKPAVKA 212


>gi|270264373|ref|ZP_06192639.1| 50S ribosomal protein L3 [Serratia odorifera 4Rx13]
 gi|270041509|gb|EFA14607.1| 50S ribosomal protein L3 [Serratia odorifera 4Rx13]
          Length = 209

 Score =  261 bits (667), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 94/210 (44%), Positives = 130/210 (61%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+
Sbjct: 2   IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTTGSKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR+ + ++    G   S   F   + VDVTG + GKGF+G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-AGQNISVEIFADVKKVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG +G  RVTV++L+VV V
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   + I V+ + K+
Sbjct: 181 DAERNLLLVKGAVPGATGGNLI-VKPAVKA 209


>gi|238021591|ref|ZP_04602017.1| hypothetical protein GCWU000324_01491 [Kingella oralis ATCC 51147]
 gi|237866205|gb|EEP67247.1| hypothetical protein GCWU000324_01491 [Kingella oralis ATCC 51147]
          Length = 215

 Score =  260 bits (666), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 106/214 (49%), Positives = 138/214 (64%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V+  +G  +PVTVL +   +V   ++ + +GY AVQV  GE K  +
Sbjct: 1   MALGLVGRKVGMTRVFTEQGASVPVTVLEMTANRVTQVKSKETDGYAAVQVTFGEKKANH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF V ++    L  G V + S F VGQLVDVTG + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLHEFVVSEEKAAELKAGDVITVSLFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV++LE+
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKSTVQHLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V VD++R L+LVKG VPGA  NS ++VR S K A
Sbjct: 181 VRVDEERNLLLVKGAVPGAV-NSNVVVRHSVKKA 213


>gi|329118598|ref|ZP_08247302.1| 50S ribosomal protein L3 [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465333|gb|EGF11614.1| 50S ribosomal protein L3 [Neisseria bacilliformis ATCC BAA-1200]
          Length = 214

 Score =  260 bits (666), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K K+
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLEITPNRVTQLKSEDTDGYTAVQVTFGQKKAKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             K   G F+   V   + L EF +  +    L VG   S S F VGQLVD+TG + GKG
Sbjct: 61  TGKAEAGHFAKAGVEAGRGLVEFALSAEKLSELQVGGEISVSLFEVGQLVDITGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNF   R +HG S SHR  GS G  QDPGRVF  ++MAG+ G  + T +NL+V
Sbjct: 121 FSGTIKRHNFDSQRTSHGNSRSHRVPGSIGMAQDPGRVFPGQRMAGQYGNTKSTAQNLQV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPGA  NS ++VR   K
Sbjct: 181 VRVDAERNLLLVKGAVPGAV-NSDVIVRPGVK 211


>gi|317126861|ref|YP_004093143.1| 50S ribosomal protein L3 [Bacillus cellulosilyticus DSM 2522]
 gi|315471809|gb|ADU28412.1| 50S ribosomal protein L3 [Bacillus cellulosilyticus DSM 2522]
          Length = 211

 Score =  260 bits (666), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 86/214 (40%), Positives = 125/214 (58%), Gaps = 4/214 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  +PVTV+      V+  +T +  GY A+Q+G  + K   
Sbjct: 1   MAKGILGKKIGMTQIFAENGEVVPVTVIEATPNVVLQKKTTEGEGYEAIQLGFDDKKQIQ 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G       +PK+ + EFR+    +   +G       F VG +VDVTG + GKGF
Sbjct: 61  QTKPAKGHAEKAKTNPKRFVKEFRLSNVAE-YEIGQEVKVDTFAVGDIVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRHN      +HG S  HR  GS G   DP  V K K + GRMGG +VT++NLE+V
Sbjct: 120 QGAIKRHNQSRGPMSHG-SRYHRRPGSMGPV-DPNHVRKGKLLPGRMGGEQVTIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            VD +R L+LVKG VPGA+K S++ V+ + K+  
Sbjct: 178 RVDTERNLLLVKGNVPGARK-SYVTVQSAVKATA 210


>gi|147676655|ref|YP_001210870.1| 50S ribosomal protein L3 [Pelotomaculum thermopropionicum SI]
 gi|189042854|sp|A5D5J0|RL3_PELTS RecName: Full=50S ribosomal protein L3
 gi|146272752|dbj|BAF58501.1| ribosomal protein L3 [Pelotomaculum thermopropionicum SI]
          Length = 210

 Score =  260 bits (666), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 88/212 (41%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  +PVTV+    C VV  +T +K+GY A+Q+G G  K ++
Sbjct: 1   MPKGLLGKKVGMTQIFTDTGLAVPVTVIEAGPCIVVQKKTPEKDGYSAIQLGFGAKKERS 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KPM G F +  V P + L E RV+   +   VG       F  G+ VDV G T G+GF
Sbjct: 61  FNKPMLGHFLAARVRPLRYLREVRVENP-ETYQVGQEIKADIFAPGEKVDVVGTTKGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH F      HG S  HR  GS G +  P RVFK +++ G +G  RVTV+NLEVV
Sbjct: 120 AGGIKRHGFHRGPMAHG-SKYHRRPGSLGAKG-PARVFKGRRLPGHLGMERVTVQNLEVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  R L+ VKG VPG  K   +L++ + K+
Sbjct: 178 KVDADRNLLAVKGAVPGP-KGGLVLIKQAAKA 208


>gi|328675407|gb|AEB28082.1| LSU ribosomal protein L3p (L3e) [Francisella cf. novicida 3523]
          Length = 210

 Score =  260 bits (666), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 98/212 (46%), Positives = 134/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++  +G  IPVTV+ ++  +V   +T + +GY A+QV  G  K  N
Sbjct: 1   MSLGLVGRKCGMTRIFTEDGVSIPVTVVQVEANKVTQVKTTETDGYNAIQVTTGFKKRSN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP  G ++   V P + L+EF +    +   VG+    + F  GQ VDV G++ GKGF
Sbjct: 61  VNKPAAGHYAKAGVEPGRGLWEFTIDNASE-YEVGASIDATIFQAGQKVDVRGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRHNF    ATHG S+SHR HGSTG  Q PGRVFKNKKMAG +G   VT+++LEVV
Sbjct: 120 QGGVKRHNFATQDATHGNSLSHRVHGSTGQNQTPGRVFKNKKMAGHLGNENVTIQSLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD + GL+L+KG +PG+     I+V  + KS
Sbjct: 180 RVDAENGLLLLKGGIPGSVGGD-IIVTPAVKS 210


>gi|145225625|ref|YP_001136303.1| 50S ribosomal protein L3 [Mycobacterium gilvum PYR-GCK]
 gi|315445978|ref|YP_004078857.1| 50S ribosomal protein L3P [Mycobacterium sp. Spyr1]
 gi|189042852|sp|A4T1U2|RL3_MYCGI RecName: Full=50S ribosomal protein L3
 gi|145218111|gb|ABP47515.1| LSU ribosomal protein L3P [Mycobacterium gilvum PYR-GCK]
 gi|315264281|gb|ADU01023.1| LSU ribosomal protein L3P [Mycobacterium sp. Spyr1]
          Length = 218

 Score =  260 bits (666), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 90/215 (41%), Positives = 130/215 (60%), Gaps = 4/215 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   + +PVTV+      V   RT +++GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTTERDGYSAVQLAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDD---LLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           +KP+ G F++  V+P++ L E R+  ++D   L  VG   +   F  G  VDVTG + GK
Sbjct: 63  NKPVTGQFAAAGVNPRRHLAELRLADNEDAGALYEVGQELTAEIFADGAYVDVTGTSKGK 122

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF+G MKRH F G  A+HG    HR  GS G    PGRVFK  +M+GRMG +RVT +NL+
Sbjct: 123 GFAGTMKRHGFKGQGASHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGSDRVTTQNLK 182

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V  VD + G++L+KG +PG +    ++VR + K  
Sbjct: 183 VHKVDAENGVLLIKGAIPG-RNGGLVVVRSAIKRG 216


>gi|148263140|ref|YP_001229846.1| 50S ribosomal protein L3 [Geobacter uraniireducens Rf4]
 gi|189042846|sp|A5GAW5|RL3_GEOUR RecName: Full=50S ribosomal protein L3
 gi|146396640|gb|ABQ25273.1| LSU ribosomal protein L3P [Geobacter uraniireducens Rf4]
          Length = 211

 Score =  260 bits (665), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 94/212 (44%), Positives = 126/212 (59%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT ++  +GRRIPVTV+    C V+  +T +K+GY A+QVG    +   
Sbjct: 1   MNKGLIGKKLGMTQIFAEDGRRIPVTVVEAGPCVVIQKKTKEKDGYSAIQVGFNSQEAAK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +  + G   +        L E RV    D   VG V S   F  G LVDVTG +IGKGF
Sbjct: 61  ANSAVVGHCKTAGSGVFSFLRELRVDN-ADQYSVGDVLSAEIFAPGDLVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G MKR  F G RA+HG S  HR+ GS GC   P RVFKNKKM G++G  +VTV+ L++V
Sbjct: 120 QGVMKRWGFKGGRASHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQLGNEKVTVQRLKIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD    LIL+ G +PG+  N  +L++DS K+
Sbjct: 179 RVDAADNLILLNGAIPGS-TNGLVLIKDSVKA 209


>gi|328884426|emb|CCA57665.1| LSU ribosomal protein L3p [Streptomyces venezuelae ATCC 10712]
          Length = 218

 Score =  260 bits (665), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 93/210 (44%), Positives = 126/210 (60%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+
Sbjct: 10  KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDIDGYESVQIAFGEIDPRKVN 69

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G
Sbjct: 70  KPLKGHFAKADVTPRRHLVELR-TADASEYTLGQEITAEVFEAGVKVDVTGKSKGKGFAG 128

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF G +A+HG    HR  GS G    PGRVFK  +MAGRMG  RVT +NL V +V
Sbjct: 129 VMKRHNFRGGKASHGAHRVHRKPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTVHAV 188

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D ++GL+L+KG VPG      +LVR + K 
Sbjct: 189 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKG 217


>gi|89100349|ref|ZP_01173214.1| 50S ribosomal protein L3 [Bacillus sp. NRRL B-14911]
 gi|89084970|gb|EAR64106.1| 50S ribosomal protein L3 [Bacillus sp. NRRL B-14911]
          Length = 208

 Score =  260 bits (665), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 86/212 (40%), Positives = 128/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +++D +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVVEATGNVVLQVKSVDTDGYEAIQLGFEDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  + +PK+ + EFR   D     VG       F  G  VDVTG++ GKGF
Sbjct: 61  SNKPEQGHVAKADTAPKRFVREFRGV-DLAAYEVGQEVKVDIFAEGDTVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G++KRH       +HG S  HR  GS G    P RVFK K + GRMGG+++TV+NLE+V
Sbjct: 120 QGSIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKALPGRMGGDQITVQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +D +R L+L+KG VPGAKK + + ++ + K+
Sbjct: 178 KIDAERNLLLIKGNVPGAKK-ALLKIKTAVKA 208


>gi|325954992|ref|YP_004238652.1| 50S ribosomal protein L3 [Weeksella virosa DSM 16922]
 gi|323437610|gb|ADX68074.1| 50S ribosomal protein L3 [Weeksella virosa DSM 16922]
          Length = 209

 Score =  260 bits (665), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 94/206 (45%), Positives = 130/206 (63%), Gaps = 2/206 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+ MT +++  G+ IP T++    C V   RT +K+GY +VQ+G  +AK KN S
Sbjct: 2   SGIIGKKVAMTSLFDENGKNIPCTIIQAGPCVVTQVRTEEKDGYKSVQLGFDDAKEKNTS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
             ++G F     +PK+KL EF   K  D L +G          G+ V VTG + GKGF G
Sbjct: 62  AALKGHFKKAGTTPKRKLVEFYGDKWVDTLNLGDEVKVDLIQEGEYVSVTGTSKGKGFQG 121

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG  +ATHG     R+ GS G   DP RVFK  +MAGRMGG +VTV+NLEV+ 
Sbjct: 122 VVKRHGFGGVGQATHGQHNRLRAPGSIGAGSDPSRVFKGMRMAGRMGGKQVTVQNLEVLK 181

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           VD ++ L++VKG VPG  KNS+++VR
Sbjct: 182 VDTEQNLLIVKGAVPGP-KNSYVIVR 206


>gi|167759862|ref|ZP_02431989.1| hypothetical protein CLOSCI_02225 [Clostridium scindens ATCC 35704]
 gi|167662481|gb|EDS06611.1| hypothetical protein CLOSCI_02225 [Clostridium scindens ATCC 35704]
          Length = 226

 Score =  260 bits (665), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 85/228 (37%), Positives = 125/228 (54%), Gaps = 19/228 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58
           M+  ++A K+GMT +++ +G   PVTVL    C V   +T++ +GY AVQVG  + K   
Sbjct: 1   MKKAILATKVGMTQIFSEDGTLTPVTVLQAGPCVVTQVKTVENDGYDAVQVGFVDKKDKI 60

Query: 59  --------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
                           V+K  +G F+   VS K+ + EF+++   +   +        F 
Sbjct: 61  VNKDKSGKKEIAHRHGVTKAEQGHFAKAGVSGKRFVREFKLENAGE-YELAQEIKADIFE 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  +D T ++ GKGF GA+KRH       THG S  HR  GS G   DP +VFK KKM 
Sbjct: 120 AGDKIDATAISKGKGFQGAIKRHGQHRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           G MG  ++T++NLE+V VD +  LILVKG VPG KK S + ++++ K+
Sbjct: 179 GHMGSKKITIQNLEIVRVDAENNLILVKGSVPGPKK-SLVTIKEAVKA 225


>gi|15676069|ref|NP_273200.1| 50S ribosomal protein L3 [Neisseria meningitidis MC58]
 gi|59802160|ref|YP_208872.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae FA 1090]
 gi|121634016|ref|YP_974261.1| 50S ribosomal protein L3 [Neisseria meningitidis FAM18]
 gi|218767168|ref|YP_002341680.1| 50S ribosomal protein L3 [Neisseria meningitidis Z2491]
 gi|240015096|ref|ZP_04722009.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae DGI18]
 gi|240081688|ref|ZP_04726231.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae FA19]
 gi|240122168|ref|ZP_04735130.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID24-1]
 gi|240124460|ref|ZP_04737416.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID332]
 gi|240129136|ref|ZP_04741797.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-93-1035]
 gi|254805814|ref|YP_003084035.1| 50S ribosomal protein L3 [Neisseria meningitidis alpha14]
 gi|260439541|ref|ZP_05793357.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae DGI2]
 gi|268597785|ref|ZP_06131952.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae FA19]
 gi|268683089|ref|ZP_06149951.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID332]
 gi|268687519|ref|ZP_06154381.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-93-1035]
 gi|291042777|ref|ZP_06568518.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae DGI2]
 gi|293398202|ref|ZP_06642407.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae F62]
 gi|304388943|ref|ZP_07370990.1| 50S ribosomal protein L3 [Neisseria meningitidis ATCC 13091]
 gi|42559565|sp|P60443|RL3_NEIMA RecName: Full=50S ribosomal protein L3
 gi|42559566|sp|P60444|RL3_NEIMB RecName: Full=50S ribosomal protein L3
 gi|81311149|sp|Q5F5S7|RL3_NEIG1 RecName: Full=50S ribosomal protein L3
 gi|166233169|sp|A1KRH3|RL3_NEIMF RecName: Full=50S ribosomal protein L3
 gi|7225360|gb|AAF40600.1| 50S ribosomal protein L3 [Neisseria meningitidis MC58]
 gi|59719055|gb|AAW90460.1| putative 50S ribosomal protein L3 [Neisseria gonorrhoeae FA 1090]
 gi|120865722|emb|CAM09451.1| 50S ribosomal protein L3 [Neisseria meningitidis FAM18]
 gi|121051176|emb|CAM07447.1| 50S ribosomal protein L3 [Neisseria meningitidis Z2491]
 gi|254669356|emb|CBA08445.1| 50S ribosomal protein L3 [Neisseria meningitidis alpha14]
 gi|268551573|gb|EEZ46592.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae FA19]
 gi|268623373|gb|EEZ55773.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID332]
 gi|268627803|gb|EEZ60203.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-93-1035]
 gi|291013211|gb|EFE05177.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae DGI2]
 gi|291611465|gb|EFF40535.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae F62]
 gi|304337077|gb|EFM03264.1| 50S ribosomal protein L3 [Neisseria meningitidis ATCC 13091]
 gi|308388358|gb|ADO30678.1| 50S ribosomal protein L3 [Neisseria meningitidis alpha710]
 gi|316985672|gb|EFV64618.1| ribosomal L3 family protein [Neisseria meningitidis H44/76]
 gi|319411374|emb|CBY91785.1| 50S ribosomal protein L3 [Neisseria meningitidis WUE 2594]
 gi|325129061|gb|EGC51910.1| ribosomal protein L3 [Neisseria meningitidis N1568]
 gi|325131084|gb|EGC53807.1| ribosomal protein L3 [Neisseria meningitidis OX99.30304]
 gi|325133054|gb|EGC55726.1| ribosomal protein L3 [Neisseria meningitidis M6190]
 gi|325135148|gb|EGC57774.1| ribosomal protein L3 [Neisseria meningitidis M13399]
 gi|325137200|gb|EGC59795.1| ribosomal protein L3 [Neisseria meningitidis M0579]
 gi|325139032|gb|EGC61578.1| ribosomal protein L3 [Neisseria meningitidis ES14902]
 gi|325141156|gb|EGC63656.1| ribosomal protein L3 [Neisseria meningitidis CU385]
 gi|325143232|gb|EGC65571.1| ribosomal protein L3 [Neisseria meningitidis 961-5945]
 gi|325145339|gb|EGC67616.1| ribosomal protein L3 [Neisseria meningitidis M01-240013]
 gi|325197429|gb|ADY92885.1| ribosomal protein L3 [Neisseria meningitidis G2136]
 gi|325199355|gb|ADY94810.1| ribosomal protein L3 [Neisseria meningitidis H44/76]
 gi|325203023|gb|ADY98477.1| ribosomal protein L3 [Neisseria meningitidis M01-240149]
 gi|325203262|gb|ADY98715.1| ribosomal protein L3 [Neisseria meningitidis M01-240355]
 gi|325205235|gb|ADZ00688.1| ribosomal protein L3 [Neisseria meningitidis M04-240196]
 gi|325207178|gb|ADZ02630.1| ribosomal protein L3 [Neisseria meningitidis NZ-05/33]
          Length = 214

 Score =  260 bits (665), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++    L  G   + S F VGQLVDVTG + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPGA  NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGAV-NSDVVVRPSVK 211


>gi|213964789|ref|ZP_03392988.1| 50S ribosomal protein L3 [Corynebacterium amycolatum SK46]
 gi|213952325|gb|EEB63708.1| 50S ribosomal protein L3 [Corynebacterium amycolatum SK46]
          Length = 218

 Score =  260 bits (665), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 88/214 (41%), Positives = 120/214 (56%), Gaps = 2/214 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT +++ E R +PVTV+    C V   RT + +GY AVQ+  GE   + V+
Sbjct: 7   KGILGTKLGMTQIFDEENRVVPVTVVEAGPCVVTQVRTKETDGYDAVQIAYGEIDPRKVN 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P++   E R   D     VG       F   + VDVTG + G GF+G
Sbjct: 67  KPEAGHFKKAGVTPRRHSVEIR-TPDASSYEVGQSVGVDIFGEIEYVDVTGTSKGHGFAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G  A HG   +HR  G  G    PGRVFK K+MAGRMG +RVT +NL++  V
Sbjct: 126 GMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGKRMAGRMGNDRVTTQNLKIQKV 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           D    L+L+KG VPGA +   ++V+ + K   + 
Sbjct: 186 DADANLLLIKGAVPGA-RGGLLVVKTATKGGAHA 218


>gi|210611125|ref|ZP_03288739.1| hypothetical protein CLONEX_00929 [Clostridium nexile DSM 1787]
 gi|210152112|gb|EEA83119.1| hypothetical protein CLONEX_00929 [Clostridium nexile DSM 1787]
          Length = 241

 Score =  260 bits (665), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 91/228 (39%), Positives = 126/228 (55%), Gaps = 19/228 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G   PVTVL    C V   +T++ +GY AVQVG  + K K 
Sbjct: 16  MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQIKTVENDGYSAVQVGFVDKKDKI 75

Query: 61  VSK----------------PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
           V+K                  +G F    VS K+ + EF+ +  ++   +        F 
Sbjct: 76  VNKDKNGKKEIVHRHGTTKAEKGHFDKAGVSSKRFVREFKFENAEEFT-LAQEIKADIFA 134

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  VD T ++ GKGF GA+KRHN      THG S  HR  GS G   DP +VFK KKM 
Sbjct: 135 AGDKVDATAISKGKGFQGAIKRHNQHRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKMP 193

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           G MG  R+T++NLE+V VD +  LILVKG VPG KK S + +++S K+
Sbjct: 194 GHMGSKRITIQNLEIVRVDAENNLILVKGSVPGPKK-SLVTIKESVKA 240


>gi|311070763|ref|YP_003975686.1| 50S ribosomal protein L3 [Bacillus atrophaeus 1942]
 gi|310871280|gb|ADP34755.1| 50S ribosomal protein L3 [Bacillus atrophaeus 1942]
          Length = 209

 Score =  260 bits (665), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 129/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVIEAAANVVLQKKTAENDGYEAIQLGFDDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    +PK+ + E R  + D    VG       F+ G++VDVTG++ GKGF
Sbjct: 61  SNKPEKGHVAKAETAPKRFVKELRGVEMDA-YEVGQEVKVEIFSAGEIVDVTGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH       +HG S  HR  GS G   DP RVFK K + GRMGG ++TV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPV-DPNRVFKGKLLPGRMGGEQITVQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+L+KG VPGA+K S I V+ + KS
Sbjct: 178 KVDAERNLLLIKGNVPGARK-SLITVKSAVKS 208


>gi|269792794|ref|YP_003317698.1| 50S ribosomal protein L3 [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100429|gb|ACZ19416.1| ribosomal protein L3 [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 209

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 101/209 (48%), Positives = 137/209 (65%), Gaps = 2/209 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V++ EGR +PVTV+    CQVV  RT +KNGY AVQ+G G  K  +
Sbjct: 1   MSMGILGRKVGMTQVFDAEGRAVPVTVVEAGPCQVVEVRTPEKNGYSAVQLGFGSVKPGS 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++PM+G+F+   V PK+ L EFRV +       G       F+ G+ VDV G++ GKG+
Sbjct: 61  VNRPMKGYFAKNGVEPKRWLREFRVDEGHG-YEKGQYVKVDLFSEGETVDVVGVSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR  FGG  A+HG S  HR  GS+G    PG +FK K M GRMGG RVTVKNL+V 
Sbjct: 120 AGVMKRFGFGGGPASHGSSKFHRQPGSSGANSYPGHIFKGKTMPGRMGGERVTVKNLKVF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +VD +  LIL++G +PGA K+  +L+R +
Sbjct: 180 AVDVENNLILLRGAIPGA-KDGLVLIRKA 207


>gi|30018380|ref|NP_830011.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 14579]
 gi|42559608|sp|Q81J42|RL3_BACCR RecName: Full=50S ribosomal protein L3
 gi|29893920|gb|AAP07212.1| LSU ribosomal protein L3P [Bacillus cereus ATCC 14579]
          Length = 210

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 93/211 (44%), Positives = 132/211 (62%), Gaps = 4/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+  +   V+  +T + +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGELIPVTVIAANPNVVLQKKTTETDGYNAIQLGFEDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  + +PK+ + E R   D D L VG       F  G++VDVTG++ GKGF
Sbjct: 61  TNKPEQGHTAKASTTPKRFIREIR-DADVDGLEVGQEVKVDVFATGEIVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       +HG S  HR  GS G    P RVFK KK+AGRMGG++VT++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L+LVKG VPGAKK S ++V+ + K
Sbjct: 178 QVDTERNLLLVKGNVPGAKK-SLVVVQGAVK 207


>gi|68536923|ref|YP_251628.1| 50S ribosomal protein L3 [Corynebacterium jeikeium K411]
 gi|109893423|sp|Q4JT47|RL3_CORJK RecName: Full=50S ribosomal protein L3
 gi|68264522|emb|CAI38010.1| 50S ribosomal protein L3 [Corynebacterium jeikeium K411]
          Length = 218

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 89/214 (41%), Positives = 125/214 (58%), Gaps = 2/214 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +KLGMT +++ E R +PVTV+    C V   R+ + +GY AVQ+  GE   + V+
Sbjct: 7   KGILGKKLGMTQIFDEENRVVPVTVVEAGPCVVTQVRSKETDGYEAVQIAFGEIDPRKVN 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P++ + E RV  D     VG   +   F   + VDVTG T GKG++G
Sbjct: 67  KPAAGHFKKAGVTPRRHVAEIRV-ADASSYEVGQDVTVDIFNDVKFVDVTGTTKGKGYAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G  A HG   +HR  GS G    PGRVFK K+MAGRMG +RVT +NL++  V
Sbjct: 126 GMKRHGFAGQGAAHGNQAAHRRVGSIGQAATPGRVFKGKRMAGRMGNDRVTQQNLKLAKV 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           D +  L+L+KG VPG      ++V+ + K   + 
Sbjct: 186 DAESNLLLIKGAVPGVN-GGLVVVKTAVKGGAHA 218


>gi|146340057|ref|YP_001205105.1| 50S ribosomal protein L3 [Bradyrhizobium sp. ORS278]
 gi|166233121|sp|A4YSJ2|RL3_BRASO RecName: Full=50S ribosomal protein L3
 gi|146192863|emb|CAL76868.1| 50S ribosomal subunit protein L3 [Bradyrhizobium sp. ORS278]
          Length = 239

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 129/219 (58%), Positives = 158/219 (72%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  IPVTVL L NCQVV HRT +KNGY+A+Q+G+G  K   
Sbjct: 1   MRSGVIAQKVGMTRVFTETGEHIPVTVLKLGNCQVVGHRTTEKNGYVALQLGSGSRKTVY 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + K  RG F+   V PK+KL EFRV +D  L+PVG+     +F VGQ VDVTG ++GKGF
Sbjct: 61  MPKAERGQFAVAKVEPKRKLAEFRVSED-SLIPVGAEIQADHFVVGQFVDVTGTSVGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ +KNKKM G MG +R+T  NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTWKNKKMPGHMGVDRITTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
             D +RGLILV+G VPG+ K  WI VRD+ K  +  +  
Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWISVRDAVKKPLPKEAP 217


>gi|226305341|ref|YP_002765299.1| 50S ribosomal protein L3 [Rhodococcus erythropolis PR4]
 gi|229489469|ref|ZP_04383332.1| 50S ribosomal protein L3 [Rhodococcus erythropolis SK121]
 gi|259709732|sp|C0ZW25|RL3_RHOE4 RecName: Full=50S ribosomal protein L3
 gi|226184456|dbj|BAH32560.1| 50S ribosomal protein L3 [Rhodococcus erythropolis PR4]
 gi|229323566|gb|EEN89324.1| 50S ribosomal protein L3 [Rhodococcus erythropolis SK121]
          Length = 218

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 88/214 (41%), Positives = 123/214 (57%), Gaps = 2/214 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   R +PVTV+      V   RT +++GY AVQ+  G    + V+
Sbjct: 7   KGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQIRTEERDGYSAVQLAFGAIDPRKVN 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V+P++ + E RV    D   VG   +   F  G  VDVTG + GKGF+G
Sbjct: 67  KPTSGQFTKAGVTPRRHVVELRVADTSD-YEVGQELTAEVFEDGAYVDVTGTSKGKGFAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G  A+HG    HR  GS G    PGRVFK  +M+GRMG +R+T +NL V  V
Sbjct: 126 TMKRHGFKGQGASHGTQAVHRRPGSIGGCATPGRVFKGMRMSGRMGSDRITTQNLSVHKV 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           D + GL+L+KG +PG +K   ++V+ + K     
Sbjct: 186 DAENGLLLIKGAIPG-RKGGLVIVKSAVKGGARA 218


>gi|194689948|gb|ACF79058.1| unknown [Zea mays]
          Length = 254

 Score =  260 bits (664), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 104/209 (49%), Positives = 146/209 (69%), Gaps = 2/209 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GV+  K GM+ +++  G ++P+TVL +D+  V   +T +K G+ A+Q+GAG+ K K++
Sbjct: 7   RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVTQVKTAEKEGFFALQLGAGQKKEKHL 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F +  V  K+KL EF V +D  LLPVG+  +  +F  GQ VDVTG+T GKGF+
Sbjct: 67  TKPEVGHFRAQGVPLKRKLREFPVTED-ALLPVGTSITVRHFVPGQFVDVTGITKGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR+ FGG+ A+HG S++HRS GSTG R  PGRVFKN+KM GRMGG + TVKN+ V  
Sbjct: 126 GVMKRYGFGGMPASHGTSLAHRSGGSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           +D  R L+ +KG VPG +  S+I V+DS 
Sbjct: 186 IDPARNLLYLKGQVPGPQ-GSFIFVKDSI 213


>gi|295394348|ref|ZP_06804573.1| 50S ribosomal protein L3 [Brevibacterium mcbrellneri ATCC 49030]
 gi|294972806|gb|EFG48656.1| 50S ribosomal protein L3 [Brevibacterium mcbrellneri ATCC 49030]
          Length = 224

 Score =  260 bits (664), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 91/211 (43%), Positives = 122/211 (57%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++     +PVTV+   +  V   R  + +GY AVQ+G GE   + V+
Sbjct: 16  KGLMGTKLGMTQVWDENNNLVPVTVISASSNVVTQIRNEEVDGYSAVQIGYGEIDPRKVN 75

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP +G F    V+P++ L E R   D     +G   S   F  G  VDVT  T GKGF+G
Sbjct: 76  KPAKGHFEKAGVAPRRHLVELR-TADAGEYELGQELSTEVFEAGIKVDVTANTKGKGFAG 134

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    PGRVFK  +MAGRMG  R T +NL + S+
Sbjct: 135 VMKRHGFAGVGASHGQHRNHRKPGSIGGAATPGRVFKGMRMAGRMGNVRHTTQNLTIHSI 194

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D +  L+L+KG VPG  K + +LVR + K A
Sbjct: 195 DSENNLLLIKGAVPGP-KGAVVLVRSAAKGA 224


>gi|132952|sp|P28600|RL3_BACST RecName: Full=50S ribosomal protein L3
 gi|40102|emb|CAA47402.1| ribosomal protein L3 [Geobacillus stearothermophilus]
          Length = 213

 Score =  260 bits (664), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 85/204 (41%), Positives = 120/204 (58%), Gaps = 3/204 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++   G  IPVTV+H     V+  +T++ +GY A+Q+G  +   K 
Sbjct: 1   MTKGILGRKIGMTQIFAENGDLIPVTVIHATPNVVLQKKTIENDGYEAIQLGFEDISEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP  G  +  N +PK+ + E R    ++   VG       F+ G +VDVTG++ GKGF
Sbjct: 61  ANKPQIGHAAKANTAPKRFIREIRGANINE-YEVGQEVKVDIFSEGDIVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    P RVFK K + GRMGG RVT++NL++V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGAIA-PNRVFKTKNLPGRMGGERVTIQNLKIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWI 204
            VD +R L+L+KG VPG +K   I
Sbjct: 178 KVDPERNLLLIKGNVPGPRKGLVI 201


>gi|166031659|ref|ZP_02234488.1| hypothetical protein DORFOR_01359 [Dorea formicigenerans ATCC
           27755]
 gi|166028636|gb|EDR47393.1| hypothetical protein DORFOR_01359 [Dorea formicigenerans ATCC
           27755]
          Length = 226

 Score =  260 bits (664), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 88/228 (38%), Positives = 125/228 (54%), Gaps = 19/228 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++N +G   PVTVL    C V   +T++ +GY AVQVG  + K K 
Sbjct: 1   MKKAILATKVGMTQIFNEDGTLTPVTVLQAGPCVVTQIKTVENDGYEAVQVGFVDKKDKT 60

Query: 61  VSK----------------PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
           V+K                  +G F+   V+ K+ + EF+ +   D   +        F 
Sbjct: 61  VNKDKNGKKEIVHRHGVTKAEQGHFAKAGVTGKRFVKEFKFENAAD-YALAQEIKADIFE 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  +D T ++ GKGF GA+KRHN       HG S  HR  GS G   DP +VFK KKM 
Sbjct: 120 AGDKIDATAISKGKGFQGAIKRHNQHRGPMAHG-SKFHRHQGSNGAASDPSKVFKGKKMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           G MG  ++T++NLEVV VD +  L+LVKG VPG KK S + +R++ K+
Sbjct: 179 GHMGSKKITIQNLEVVRVDAENNLLLVKGSVPGPKK-SLVTIREAVKA 225


>gi|331699176|ref|YP_004335415.1| 50S ribosomal protein L3 [Pseudonocardia dioxanivorans CB1190]
 gi|326953865|gb|AEA27562.1| 50S ribosomal protein L3 [Pseudonocardia dioxanivorans CB1190]
          Length = 217

 Score =  260 bits (664), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 89/213 (41%), Positives = 126/213 (59%), Gaps = 2/213 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           +G++ +KLGMT V++   R +PVTV+      V   R+ + +GY+AVQ+  G    + V+
Sbjct: 7   TGILGKKLGMTQVFDENNRVVPVTVVQAGPNVVTQIRSQETDGYVAVQLAFGAVDPRRVN 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V+P++   E R   D     +G   +   F  G +VDV G + GKG++G
Sbjct: 67  KPETGHFAKAGVTPRRYTVELRTT-DAGEYSLGQEITAEVFEPGAVVDVVGTSKGKGYAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF GL A+HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V  V
Sbjct: 126 VMKRHNFKGLGASHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGSVRVTTQNLTVHRV 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           D +RGL+L+KG VPG  + + ++V+ + K    
Sbjct: 186 DAERGLLLIKGAVPGP-RGALVVVKTAAKGGAK 217


>gi|161870915|ref|YP_001600095.1| 50S ribosomal protein L3 [Neisseria meningitidis 053442]
 gi|189042853|sp|A9M3W6|RL3_NEIM0 RecName: Full=50S ribosomal protein L3
 gi|161596468|gb|ABX74128.1| 50S ribosomal protein L3 [Neisseria meningitidis 053442]
          Length = 214

 Score =  260 bits (664), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 104/212 (49%), Positives = 135/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++    L  G   + S F VGQLVDVTG++ GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGISKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPGA  NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGAV-NSDVVVRPSVK 211


>gi|225869536|ref|YP_002745483.1| 50S ribosomal protein L3 [Streptococcus equi subsp. equi 4047]
 gi|254803692|sp|C0M660|RL3_STRE4 RecName: Full=50S ribosomal protein L3
 gi|225698940|emb|CAW91967.1| 50S ribosomal protein L3 [Streptococcus equi subsp. equi 4047]
          Length = 208

 Score =  260 bits (664), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 91/213 (42%), Positives = 130/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT ++   G  IPVTV+      V+  +T++ +GY A+QVG  + +   
Sbjct: 1   MTKGILGEKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAIQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDIFAAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVS-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207


>gi|224827017|ref|ZP_03700114.1| ribosomal protein L3 [Lutiella nitroferrum 2002]
 gi|224600683|gb|EEG06869.1| ribosomal protein L3 [Lutiella nitroferrum 2002]
          Length = 214

 Score =  260 bits (664), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 97/215 (45%), Positives = 128/215 (59%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTVL +   +V   +T + +GY A+QV  G  K   
Sbjct: 1   MSLGLVGRKVGMTRIFAEDGASIPVTVLDMAANRVTQIKTAEVDGYEAIQVTYGSCKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF +  +       G   +   F VGQLVDVTG + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLGEFVLNAEQLSQFKPGDAITVEIFQVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNF   RA+HG S SH + GS G  QDPGRV   K+MAG+ G  + TV+ LE+
Sbjct: 121 FSGVIKRHNFSSNRASHGNSRSHNTPGSIGQAQDPGRVLPGKRMAGQYGNVQSTVQRLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           V +D +R LILVKG VPGA  N  ++VR S K+  
Sbjct: 181 VRIDTERQLILVKGAVPGA-TNGDVVVRPSVKAGA 214


>gi|163938118|ref|YP_001643002.1| 50S ribosomal protein L3 [Bacillus weihenstephanensis KBAB4]
 gi|218895245|ref|YP_002443656.1| ribosomal protein L3 [Bacillus cereus G9842]
 gi|228970299|ref|ZP_04130958.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|229053956|ref|ZP_04195390.1| 50S ribosomal protein L3 [Bacillus cereus AH603]
 gi|229131118|ref|ZP_04260030.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST196]
 gi|226725130|sp|B7IT19|RL3_BACC2 RecName: Full=50S ribosomal protein L3
 gi|226725133|sp|A9VP77|RL3_BACWK RecName: Full=50S ribosomal protein L3
 gi|163860315|gb|ABY41374.1| ribosomal protein L3 [Bacillus weihenstephanensis KBAB4]
 gi|218544022|gb|ACK96416.1| ribosomal protein L3 [Bacillus cereus G9842]
 gi|228652331|gb|EEL08256.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST196]
 gi|228721374|gb|EEL72895.1| 50S ribosomal protein L3 [Bacillus cereus AH603]
 gi|228789408|gb|EEM37328.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|326937905|gb|AEA13801.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 210

 Score =  260 bits (664), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 93/211 (44%), Positives = 132/211 (62%), Gaps = 4/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+  +   V+  +T + +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGELIPVTVIAANPNVVLQKKTTETDGYNAIQLGFEDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  + +PK+ + E R   D D L VG       F  G++VDVTG++ GKGF
Sbjct: 61  TNKPEQGHTAKASTTPKRFIREIR-DADVDGLEVGQEVKVEVFAAGEIVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       +HG S  HR  GS G    P RVFK KK+AGRMGG++VT++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L+LVKG VPGAKK S ++V+ + K
Sbjct: 178 QVDTERNLLLVKGNVPGAKK-SLVVVQGAVK 207


>gi|114327218|ref|YP_744375.1| 50S ribosomal protein L3 [Granulibacter bethesdensis CGDNIH1]
 gi|122327802|sp|Q0BUQ0|RL3_GRABC RecName: Full=50S ribosomal protein L3
 gi|114315392|gb|ABI61452.1| LSU ribosomal protein L3P [Granulibacter bethesdensis CGDNIH1]
          Length = 231

 Score =  260 bits (664), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 126/212 (59%), Positives = 160/212 (75%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++ARKLGMT ++  +G  +PVTVLHLD  QVV  RT +++GY AVQ+G G+AK K+
Sbjct: 1   MRTGLIARKLGMTRLFKEDGTHVPVTVLHLDQVQVVDTRTKERDGYTAVQLGFGQAKPKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSK  +G F+ V V PKKKL EFRV +D  +L  G+  S  +F VGQ VDVTG + GKGF
Sbjct: 61  VSKANKGHFARVKVEPKKKLVEFRVAED-AILEPGATLSAEHFLVGQKVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NF GL A+HGVSISHRSHGSTG RQDPG+ FKNKKMAG +G  RVT +N+EV 
Sbjct: 120 AGAMKRWNFAGLEASHGVSISHRSHGSTGNRQDPGKTFKNKKMAGHLGDERVTTQNVEVA 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  RGL++++G +PGA K  ++LVRD+ K 
Sbjct: 180 HVDAARGLLMIRGSIPGA-KGGYVLVRDAVKR 210


>gi|241759650|ref|ZP_04757751.1| 50S ribosomal protein L3 [Neisseria flavescens SK114]
 gi|241320022|gb|EER56403.1| 50S ribosomal protein L3 [Neisseria flavescens SK114]
          Length = 214

 Score =  260 bits (664), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 104/212 (49%), Positives = 135/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++    L  G   + S F VGQLVDVTG + GKG
Sbjct: 61  VNKTEAGHFAKAGVEAGRGLVEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  RA+HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRASHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPG+  NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGSV-NSDVVVRPSVK 211


>gi|239943577|ref|ZP_04695514.1| 50S ribosomal protein L3 [Streptomyces roseosporus NRRL 15998]
 gi|239990030|ref|ZP_04710694.1| 50S ribosomal protein L3 [Streptomyces roseosporus NRRL 11379]
 gi|291447044|ref|ZP_06586434.1| 50S ribosomal protein L3 [Streptomyces roseosporus NRRL 15998]
 gi|291349991|gb|EFE76895.1| 50S ribosomal protein L3 [Streptomyces roseosporus NRRL 15998]
          Length = 214

 Score =  260 bits (664), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 98/211 (46%), Positives = 129/211 (61%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            GV+  KLGMT V++   R +PVTV+    C V   RT D +GY AVQ+  GE   + V+
Sbjct: 6   KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F+  +V+P++ L E R   D     +G   + + F  G  VDVTG + GKGF+G
Sbjct: 66  KPLKGHFAKADVTPRRHLVELR-TPDASEYTLGQEVTAAVFESGVKVDVTGKSKGKGFAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL + +V
Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+L+KG VPG      +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214


>gi|289706533|ref|ZP_06502883.1| 50S ribosomal protein L3 [Micrococcus luteus SK58]
 gi|289556668|gb|EFD50009.1| 50S ribosomal protein L3 [Micrococcus luteus SK58]
          Length = 216

 Score =  260 bits (664), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 90/211 (42%), Positives = 124/211 (58%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++ + + IPVTV+  D   V   R+ + +GY AVQ+  G+   + V+
Sbjct: 8   KGLLGTKLGMTQVWDEDNKLIPVTVVKADPNVVTQLRSEETDGYTAVQIAYGQIDPRRVT 67

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    V+P++ L E R   D     +G   +   F  GQ VDV G T GKGF+G
Sbjct: 68  KPLAGHFEKAGVTPRRHLVELR-TADAAEYELGQDVTVEVFEAGQKVDVVGTTKGKGFAG 126

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRH F G+ A+HG   +HR  GS G    PGRVFK ++M GRMG  R T  NL +  +
Sbjct: 127 AMKRHGFAGVGASHGAHKNHRKPGSVGGASTPGRVFKGQRMPGRMGAVRQTTMNLTLHGI 186

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D +  L+L+KG VPG+ K   +LVR + K A
Sbjct: 187 DVENNLLLIKGAVPGS-KGQVVLVRSAVKGA 216


>gi|221069450|ref|ZP_03545555.1| ribosomal protein L3 [Comamonas testosteroni KF-1]
 gi|264676442|ref|YP_003276348.1| ribosomal protein L3 [Comamonas testosteroni CNB-2]
 gi|299531236|ref|ZP_07044647.1| 50S ribosomal protein L3 [Comamonas testosteroni S44]
 gi|220714473|gb|EED69841.1| ribosomal protein L3 [Comamonas testosteroni KF-1]
 gi|262206954|gb|ACY31052.1| ribosomal protein L3 [Comamonas testosteroni CNB-2]
 gi|298720819|gb|EFI61765.1| 50S ribosomal protein L3 [Comamonas testosteroni S44]
          Length = 224

 Score =  260 bits (664), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 90/214 (42%), Positives = 129/214 (60%), Gaps = 3/214 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  +PVTV+ + N +V   +T + +GY+A+QV  G  K   V+K
Sbjct: 8   GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVALQVTFGARKASRVTK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121
           P  G  +   V   +   EFRV  +       G+V      F+VGQ VDV G +IGKG++
Sbjct: 68  PQAGHLAKAGVEAGEVTREFRVTDETAGKYAAGAVLPVAELFSVGQKVDVQGTSIGKGYA 127

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNF   RA+HG S SH   GS G  QDPGRVF  K+M G MG   VT +NL+VV 
Sbjct: 128 GTIKRHNFSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTTQNLDVVR 187

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           +D+ R L+L+KG +PGA K  ++ VR + K+  +
Sbjct: 188 IDEARQLLLIKGAIPGA-KGGFVSVRPAIKAKAS 220


>gi|297834662|ref|XP_002885213.1| hypothetical protein ARALYDRAFT_479224 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331053|gb|EFH61472.1| hypothetical protein ARALYDRAFT_479224 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 323

 Score =  260 bits (664), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 100/209 (47%), Positives = 144/209 (68%), Gaps = 2/209 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K GMT +++  G R+P+++L +D+  V   +T++K G  A+Q+G G+ K K++
Sbjct: 75  RTGIIAVKCGMTALWDKWGARVPISILWVDDNIVSQVKTVEKEGIFALQIGCGQKKPKHL 134

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SK + G F +  V  K+KL EF V +D  LLPVG+     +F  GQ VDVTG+T GKGF 
Sbjct: 135 SKAVVGHFRAQGVPLKRKLREFPVTED-ALLPVGTSLGVRHFVPGQYVDVTGITRGKGFQ 193

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F G+  +HG S+SHRS GSTG R  PG+VFK KKMAGRMG ++ TVKN+ V  
Sbjct: 194 GCMKRHGFSGMPGSHGASLSHRSGGSTGQRDAPGKVFKGKKMAGRMGADQRTVKNVWVYK 253

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           +D  R L+ V+G VPGA+ N ++ ++D++
Sbjct: 254 IDPARNLMWVRGQVPGAEGN-FVFIKDAW 281


>gi|55821905|ref|YP_140347.1| 50S ribosomal protein L3 [Streptococcus thermophilus LMG 18311]
 gi|55823821|ref|YP_142262.1| 50S ribosomal protein L3 [Streptococcus thermophilus CNRZ1066]
 gi|81820218|sp|Q5LXR1|RL3_STRT1 RecName: Full=50S ribosomal protein L3
 gi|81820383|sp|Q5M2B3|RL3_STRT2 RecName: Full=50S ribosomal protein L3
 gi|55737890|gb|AAV61532.1| 50S ribosomal protein L3 [Streptococcus thermophilus LMG 18311]
 gi|55739806|gb|AAV63447.1| 50S ribosomal protein L3 [Streptococcus thermophilus CNRZ1066]
          Length = 208

 Score =  260 bits (664), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VGS  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSEITVDIFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207


>gi|107103776|ref|ZP_01367694.1| hypothetical protein PaerPA_01004847 [Pseudomonas aeruginosa PACS2]
          Length = 200

 Score =  260 bits (664), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 92/201 (45%), Positives = 128/201 (63%), Gaps = 3/201 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV AGE +   V+K   G F+ 
Sbjct: 1   MTRIFTEEGVSIPVTVIEVEPNRVTQFKTEETDGYRAVQVTAGERRASRVTKAQAGHFAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
            NV+  + ++EFR+   ++    G   +   F  GQ+VDVTG + GKGF+G +KR NF G
Sbjct: 61  ANVAAGRGVWEFRL--GEEQYAAGDQITVDLFQAGQMVDVTGESKGKGFAGTIKRWNFRG 118

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
              THG S+SHR  GS G  Q PGRVFK KKM+G +G  RVTV++LE+V VD +R L+LV
Sbjct: 119 QDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHLGAERVTVQSLEIVRVDAERNLLLV 178

Query: 192 KGCVPGAKKNSWILVRDSFKS 212
           KG VPGA     ++VR + K+
Sbjct: 179 KGAVPGATGGD-VIVRPAAKA 198


>gi|171778375|ref|ZP_02919554.1| hypothetical protein STRINF_00405 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282906|gb|EDT48330.1| hypothetical protein STRINF_00405 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 208

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 93/213 (43%), Positives = 130/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG   +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGQEITVDTFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207


>gi|95931442|ref|ZP_01314148.1| ribosomal protein L3 [Desulfuromonas acetoxidans DSM 684]
 gi|95132510|gb|EAT14203.1| ribosomal protein L3 [Desulfuromonas acetoxidans DSM 684]
          Length = 210

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 95/213 (44%), Positives = 126/213 (59%), Gaps = 5/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M +G++ +KLGMT ++   G RIPVTV+    C VV  + +D +GY AVQ+G GE K   
Sbjct: 2   MVNGILGKKLGMTQIFTESGMRIPVTVIEAGPCTVVQKKVVDTDGYDAVQLGFGEQKAHR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119
           ++KP  G F          L E     +   L VG+       F+ G +VDV G + GKG
Sbjct: 62  INKPKMGHFKKAGKGVFASLREM--DGEIAELEVGAEIVCGDVFSAGDIVDVMGTSKGKG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR NF G R+THG S  HR+ G+ GC   P RVFK KKMAG+MG  RVT++NLE+
Sbjct: 120 FQGVMKRWNFSGGRSTHG-SKFHRAPGAIGCSAWPSRVFKGKKMAGQMGNERVTIQNLEI 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V V   + LILVKG +PG  KN  + +R + K+
Sbjct: 179 VDVRADQNLILVKGAIPGP-KNGLVTIRKAIKA 210


>gi|319639549|ref|ZP_07994296.1| 50S ribosomal protein L3 [Neisseria mucosa C102]
 gi|317399120|gb|EFV79794.1| 50S ribosomal protein L3 [Neisseria mucosa C102]
          Length = 214

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 103/212 (48%), Positives = 134/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++    L  G   + S F VGQLVDVTG + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLVEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPG+  NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGSV-NSDVVVRPSVK 211


>gi|302536251|ref|ZP_07288593.1| 50S ribosomal protein L3 [Streptomyces sp. C]
 gi|302445146|gb|EFL16962.1| 50S ribosomal protein L3 [Streptomyces sp. C]
          Length = 214

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 98/211 (46%), Positives = 129/211 (61%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            GV+  KLGMT V++   R +PVTV+    C V   RT D +GY +VQ+  GE   + V+
Sbjct: 6   KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDIDGYESVQIAFGEIDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G
Sbjct: 66  KPLKGHFAKADVTPRRHLVELRTS-DASEYTLGQEITAEVFESGVKVDVTGNSKGKGFAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF GL A HGV   HRS GS G    PGRVFK  +MAGRMG  RVT +NL + +V
Sbjct: 125 VMKRHNFRGLGAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+L+KG VPG      +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214


>gi|296313365|ref|ZP_06863306.1| 50S ribosomal protein L3 [Neisseria polysaccharea ATCC 43768]
 gi|296840076|gb|EFH24014.1| 50S ribosomal protein L3 [Neisseria polysaccharea ATCC 43768]
          Length = 214

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 104/212 (49%), Positives = 135/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY+AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYIAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++    L  G   + S F VGQLVDVTG + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPGA  NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGAV-NSDVVVRPSVK 211


>gi|30260301|ref|NP_842678.1| 50S ribosomal protein L3 [Bacillus anthracis str. Ames]
 gi|42779191|ref|NP_976438.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 10987]
 gi|47525366|ref|YP_016715.1| 50S ribosomal protein L3 [Bacillus anthracis str. 'Ames Ancestor']
 gi|49183144|ref|YP_026396.1| 50S ribosomal protein L3 [Bacillus anthracis str. Sterne]
 gi|49479271|ref|YP_034462.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|52145108|ref|YP_081721.1| 50S ribosomal protein L3 [Bacillus cereus E33L]
 gi|118475879|ref|YP_893030.1| 50S ribosomal protein L3 [Bacillus thuringiensis str. Al Hakam]
 gi|206972204|ref|ZP_03233151.1| 50S ribosomal protein L3 [Bacillus cereus AH1134]
 gi|217957685|ref|YP_002336229.1| 50S ribosomal protein L3 [Bacillus cereus AH187]
 gi|218230754|ref|YP_002364959.1| 50S ribosomal protein L3 [Bacillus cereus B4264]
 gi|218901314|ref|YP_002449148.1| ribosomal protein L3 [Bacillus cereus AH820]
 gi|222093880|ref|YP_002527930.1| 50S ribosomal protein l3 [Bacillus cereus Q1]
 gi|225862162|ref|YP_002747540.1| 50S ribosomal protein L3 [Bacillus cereus 03BB102]
 gi|227812783|ref|YP_002812792.1| 50S ribosomal protein L3 [Bacillus anthracis str. CDC 684]
 gi|228912849|ref|ZP_04076496.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228919060|ref|ZP_04082439.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228983365|ref|ZP_04143578.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229089241|ref|ZP_04220522.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-42]
 gi|229153888|ref|ZP_04282018.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 4342]
 gi|229182504|ref|ZP_04309755.1| 50S ribosomal protein L3 [Bacillus cereus BGSC 6E1]
 gi|229188395|ref|ZP_04315443.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 10876]
 gi|229194500|ref|ZP_04321303.1| 50S ribosomal protein L3 [Bacillus cereus m1293]
 gi|229603960|ref|YP_002864761.1| 50S ribosomal protein L3 [Bacillus anthracis str. A0248]
 gi|254684386|ref|ZP_05148246.1| 50S ribosomal protein L3 [Bacillus anthracis str. CNEVA-9066]
 gi|254720832|ref|ZP_05182624.1| 50S ribosomal protein L3 [Bacillus anthracis str. A1055]
 gi|254733589|ref|ZP_05191309.1| 50S ribosomal protein L3 [Bacillus anthracis str. Western North
           America USA6153]
 gi|254739507|ref|ZP_05197204.1| 50S ribosomal protein L3 [Bacillus anthracis str. Kruger B]
 gi|254751228|ref|ZP_05203266.1| 50S ribosomal protein L3 [Bacillus anthracis str. Vollum]
 gi|254756765|ref|ZP_05208794.1| 50S ribosomal protein L3 [Bacillus anthracis str. Australia 94]
 gi|296500944|ref|YP_003662644.1| 50S ribosomal protein L3 [Bacillus thuringiensis BMB171]
 gi|300119578|ref|ZP_07057122.1| 50S ribosomal protein L3 [Bacillus cereus SJ1]
 gi|301051847|ref|YP_003790058.1| 50S ribosomal protein L3 [Bacillus anthracis CI]
 gi|42559609|sp|Q81VT0|RL3_BACAN RecName: Full=50S ribosomal protein L3
 gi|81824428|sp|Q63H90|RL3_BACCZ RecName: Full=50S ribosomal protein L3
 gi|81828437|sp|Q6HPQ8|RL3_BACHK RecName: Full=50S ribosomal protein L3
 gi|81831213|sp|Q73F96|RL3_BACC1 RecName: Full=50S ribosomal protein L3
 gi|166233117|sp|A0R8I0|RL3_BACAH RecName: Full=50S ribosomal protein L3
 gi|226725129|sp|B7JKB9|RL3_BACC0 RecName: Full=50S ribosomal protein L3
 gi|226725131|sp|B7HJ48|RL3_BACC4 RecName: Full=50S ribosomal protein L3
 gi|226725132|sp|B7HQU4|RL3_BACC7 RecName: Full=50S ribosomal protein L3
 gi|254803651|sp|C3P9Q5|RL3_BACAA RecName: Full=50S ribosomal protein L3
 gi|254803652|sp|C3LJ82|RL3_BACAC RecName: Full=50S ribosomal protein L3
 gi|254803653|sp|C1ET39|RL3_BACC3 RecName: Full=50S ribosomal protein L3
 gi|254803654|sp|B9IZJ4|RL3_BACCQ RecName: Full=50S ribosomal protein L3
 gi|30253622|gb|AAP24164.1| 50S ribosomal protein L3 [Bacillus anthracis str. Ames]
 gi|42735106|gb|AAS39046.1| ribosomal protein L3 [Bacillus cereus ATCC 10987]
 gi|47500514|gb|AAT29190.1| ribosomal protein L3 [Bacillus anthracis str. 'Ames Ancestor']
 gi|49177071|gb|AAT52447.1| ribosomal protein L3 [Bacillus anthracis str. Sterne]
 gi|49330827|gb|AAT61473.1| ribosomal protein L3 (50S ribosomal protein L3) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|51978577|gb|AAU20127.1| ribosomal protein L3 (50S ribosomal protein L3) [Bacillus cereus
           E33L]
 gi|118415104|gb|ABK83523.1| LSU ribosomal protein L3P [Bacillus thuringiensis str. Al Hakam]
 gi|206732778|gb|EDZ49953.1| 50S ribosomal protein L3 [Bacillus cereus AH1134]
 gi|217067429|gb|ACJ81679.1| ribosomal protein L3 [Bacillus cereus AH187]
 gi|218158711|gb|ACK58703.1| ribosomal protein L3 [Bacillus cereus B4264]
 gi|218534762|gb|ACK87160.1| ribosomal protein L3 [Bacillus cereus AH820]
 gi|221237928|gb|ACM10638.1| ribosomal protein L3 (50S ribosomal protein L3) [Bacillus cereus
           Q1]
 gi|225787302|gb|ACO27519.1| 50S ribosomal protein L3 [Bacillus cereus 03BB102]
 gi|227007571|gb|ACP17314.1| 50S ribosomal protein L3 [Bacillus anthracis str. CDC 684]
 gi|228588966|gb|EEK46981.1| 50S ribosomal protein L3 [Bacillus cereus m1293]
 gi|228595069|gb|EEK52840.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 10876]
 gi|228600959|gb|EEK58528.1| 50S ribosomal protein L3 [Bacillus cereus BGSC 6E1]
 gi|228629569|gb|EEK86266.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 4342]
 gi|228694080|gb|EEL47762.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-42]
 gi|228776355|gb|EEM24708.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228840585|gb|EEM85847.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228846785|gb|EEM91790.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229268368|gb|ACQ50005.1| 50S ribosomal protein L3 [Bacillus anthracis str. A0248]
 gi|296321996|gb|ADH04924.1| 50S ribosomal protein L3 [Bacillus thuringiensis BMB171]
 gi|298723050|gb|EFI63948.1| 50S ribosomal protein L3 [Bacillus cereus SJ1]
 gi|300374016|gb|ADK02920.1| 50S ribosomal protein L3 [Bacillus cereus biovar anthracis str. CI]
 gi|324324101|gb|ADY19361.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 210

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 93/211 (44%), Positives = 132/211 (62%), Gaps = 4/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+  +   V+  +T + +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGELIPVTVIAANPNVVLQKKTTETDGYNAIQLGFEDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  + +PK+ + E R   D D L VG       F  G++VDVTG++ GKGF
Sbjct: 61  TNKPEQGHTAKASTTPKRFIREIR-DADVDGLEVGQEVKVDVFATGEIVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       +HG S  HR  GS G    P RVFK KK+AGRMGG++VT++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L+LVKG VPGAKK S ++V+ + K
Sbjct: 178 QVDTERNLLLVKGNVPGAKK-SLVVVQGAVK 207


>gi|148256392|ref|YP_001240977.1| 50S ribosomal protein L3 [Bradyrhizobium sp. BTAi1]
 gi|166233120|sp|A5ELM7|RL3_BRASB RecName: Full=50S ribosomal protein L3
 gi|146408565|gb|ABQ37071.1| LSU ribosomal protein L3P [Bradyrhizobium sp. BTAi1]
          Length = 239

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 130/219 (59%), Positives = 158/219 (72%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  IPVTVL L NCQVV HRT +KNGY+A+Q+G+G  K   
Sbjct: 1   MRSGVIAQKVGMTRVFTETGEHIPVTVLKLGNCQVVGHRTTEKNGYVALQLGSGSRKTVY 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + K  RG F+   V PK+K+ EFRV +D  L+PVG+     +F VGQ VDVTG T+GKGF
Sbjct: 61  MPKAERGQFAVAKVEPKRKVAEFRVSED-SLIPVGAEILADHFVVGQFVDVTGTTVGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ +KNKKM G MG +RVT  NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTWKNKKMPGHMGVDRVTTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
             D +RGLILV+G VPG+ K  WI VRD+ K  +  +  
Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWISVRDAVKKPLPKEAP 217


>gi|163847923|ref|YP_001635967.1| 50S ribosomal protein L3 [Chloroflexus aurantiacus J-10-fl]
 gi|222525803|ref|YP_002570274.1| 50S ribosomal protein L3 [Chloroflexus sp. Y-400-fl]
 gi|189042836|sp|A9WH66|RL3_CHLAA RecName: Full=50S ribosomal protein L3
 gi|254803663|sp|B9LJD2|RL3_CHLSY RecName: Full=50S ribosomal protein L3
 gi|163669212|gb|ABY35578.1| ribosomal protein L3 [Chloroflexus aurantiacus J-10-fl]
 gi|222449682|gb|ACM53948.1| ribosomal protein L3 [Chloroflexus sp. Y-400-fl]
          Length = 210

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 89/212 (41%), Positives = 126/212 (59%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GM   +  +G  IPVTV+    C V   RT +++GY AVQ+G  E + + 
Sbjct: 1   MIHGLLGRKIGMMQYFTAQGMAIPVTVIAAGPCIVTQIRTPERDGYSAVQLGYEEVEPRK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G   +      + L EF         P G V +   F  GQ VD++G + G+GF
Sbjct: 61  LTKPQQGHLKASGGKMLRYLREFSADDPQAHTP-GEVVTVELFRPGQKVDISGTSKGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH F G   THG S  HR+ GS G    PGRV+K ++MAGRMGG RVT++NLEVV
Sbjct: 120 AGVVKRHGFRGGPKTHGQSDRHRAPGSIGAGTTPGRVWKGQRMAGRMGGTRVTIQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ L+LVKG VPGA +N  + +R + K 
Sbjct: 180 EVLPEQNLLLVKGSVPGA-RNGLLQIRKAVKG 210


>gi|126453776|ref|YP_001068034.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1106a]
 gi|134283182|ref|ZP_01769883.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 305]
 gi|217424706|ref|ZP_03456203.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 576]
 gi|237814145|ref|YP_002898596.1| 50S ribosomal protein L3 [Burkholderia pseudomallei MSHR346]
 gi|238563921|ref|ZP_00438031.2| 50S ribosomal protein L3 [Burkholderia mallei GB8 horse 4]
 gi|242314689|ref|ZP_04813705.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1106b]
 gi|251767493|ref|ZP_02267491.2| 50S ribosomal protein L3 [Burkholderia mallei PRL-20]
 gi|254174782|ref|ZP_04881443.1| 50S ribosomal protein L3 [Burkholderia mallei ATCC 10399]
 gi|254198510|ref|ZP_04904931.1| 50S ribosomal protein L3 [Burkholderia pseudomallei S13]
 gi|254201239|ref|ZP_04907603.1| 50S ribosomal protein L3 [Burkholderia mallei FMH]
 gi|254206580|ref|ZP_04912931.1| 50S ribosomal protein L3 [Burkholderia mallei JHU]
 gi|254260454|ref|ZP_04951508.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1710a]
 gi|254300578|ref|ZP_04968023.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 406e]
 gi|254357118|ref|ZP_04973392.1| 50S ribosomal protein L3 [Burkholderia mallei 2002721280]
 gi|212288252|sp|A3P0B3|RL3_BURP0 RecName: Full=50S ribosomal protein L3
 gi|126227418|gb|ABN90958.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1106a]
 gi|134245377|gb|EBA45470.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 305]
 gi|147747133|gb|EDK54209.1| 50S ribosomal protein L3 [Burkholderia mallei FMH]
 gi|147752122|gb|EDK59188.1| 50S ribosomal protein L3 [Burkholderia mallei JHU]
 gi|148026182|gb|EDK84267.1| 50S ribosomal protein L3 [Burkholderia mallei 2002721280]
 gi|157810515|gb|EDO87685.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 406e]
 gi|160695827|gb|EDP85797.1| 50S ribosomal protein L3 [Burkholderia mallei ATCC 10399]
 gi|169655250|gb|EDS87943.1| 50S ribosomal protein L3 [Burkholderia pseudomallei S13]
 gi|217392162|gb|EEC32187.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 576]
 gi|237506368|gb|ACQ98686.1| 50S ribosomal protein L3 [Burkholderia pseudomallei MSHR346]
 gi|238519676|gb|EEP83145.1| 50S ribosomal protein L3 [Burkholderia mallei GB8 horse 4]
 gi|242137928|gb|EES24330.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1106b]
 gi|243062596|gb|EES44782.1| 50S ribosomal protein L3 [Burkholderia mallei PRL-20]
 gi|254219143|gb|EET08527.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1710a]
          Length = 223

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 99/212 (46%), Positives = 132/212 (62%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 5   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 64

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR++ D    L  G+V  P  F VGQ VDV G++IGKG
Sbjct: 65  VTKPLAGHLAKAGVEAGEILKEFRIEADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKG 124

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NFG  RA+HG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 125 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 184

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             +D  R L+LVKG VPGA K   + V  + K
Sbjct: 185 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 215


>gi|53720821|ref|YP_109807.1| 50S ribosomal protein L3 [Burkholderia pseudomallei K96243]
 gi|53723854|ref|YP_104166.1| 50S ribosomal protein L3 [Burkholderia mallei ATCC 23344]
 gi|76808912|ref|YP_335140.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1710b]
 gi|121599817|ref|YP_994456.1| 50S ribosomal protein L3 [Burkholderia mallei SAVP1]
 gi|124384577|ref|YP_001027895.1| 50S ribosomal protein L3 [Burkholderia mallei NCTC 10229]
 gi|126441597|ref|YP_001060750.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 668]
 gi|126449489|ref|YP_001082990.1| 50S ribosomal protein L3 [Burkholderia mallei NCTC 10247]
 gi|167721577|ref|ZP_02404813.1| 50S ribosomal protein L3 [Burkholderia pseudomallei DM98]
 gi|167740551|ref|ZP_02413325.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 14]
 gi|167817756|ref|ZP_02449436.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 91]
 gi|167826153|ref|ZP_02457624.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 9]
 gi|167847665|ref|ZP_02473173.1| 50S ribosomal protein L3 [Burkholderia pseudomallei B7210]
 gi|167896237|ref|ZP_02483639.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 7894]
 gi|167904619|ref|ZP_02491824.1| 50S ribosomal protein L3 [Burkholderia pseudomallei NCTC 13177]
 gi|167912884|ref|ZP_02499975.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 112]
 gi|167920844|ref|ZP_02507935.1| 50S ribosomal protein L3 [Burkholderia pseudomallei BCC215]
 gi|254180339|ref|ZP_04886937.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1655]
 gi|254190302|ref|ZP_04896810.1| 50S ribosomal protein L3 [Burkholderia pseudomallei Pasteur 52237]
 gi|81823913|sp|Q62GK5|RL3_BURMA RecName: Full=50S ribosomal protein L3
 gi|81824632|sp|Q63Q11|RL3_BURPS RecName: Full=50S ribosomal protein L3
 gi|109893415|sp|Q3JMR3|RL3_BURP1 RecName: Full=50S ribosomal protein L3
 gi|166233124|sp|A3MRV4|RL3_BURM7 RecName: Full=50S ribosomal protein L3
 gi|166233125|sp|A2S7H6|RL3_BURM9 RecName: Full=50S ribosomal protein L3
 gi|166233126|sp|A1V8A3|RL3_BURMS RecName: Full=50S ribosomal protein L3
 gi|166233127|sp|A3NEH9|RL3_BURP6 RecName: Full=50S ribosomal protein L3
 gi|52211235|emb|CAH37224.1| 50S ribosomal protein L3 [Burkholderia pseudomallei K96243]
 gi|52427277|gb|AAU47870.1| ribosomal protein L3 [Burkholderia mallei ATCC 23344]
 gi|76578365|gb|ABA47840.1| ribosomal protein L3 [Burkholderia pseudomallei 1710b]
 gi|121228627|gb|ABM51145.1| 50S ribosomal protein L3 [Burkholderia mallei SAVP1]
 gi|124292597|gb|ABN01866.1| 50S ribosomal protein L3 [Burkholderia mallei NCTC 10229]
 gi|126221090|gb|ABN84596.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 668]
 gi|126242359|gb|ABO05452.1| 50S ribosomal protein L3 [Burkholderia mallei NCTC 10247]
 gi|157937978|gb|EDO93648.1| 50S ribosomal protein L3 [Burkholderia pseudomallei Pasteur 52237]
 gi|184210878|gb|EDU07921.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1655]
          Length = 219

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 99/212 (46%), Positives = 132/212 (62%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR++ D    L  G+V  P  F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEILKEFRIEADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NFG  RA+HG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             +D  R L+LVKG VPGA K   + V  + K
Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211


>gi|300857762|ref|YP_003782745.1| 50S ribosomal protein L3 [Corynebacterium pseudotuberculosis FRC41]
 gi|300685216|gb|ADK28138.1| 50S ribosomal protein L3 [Corynebacterium pseudotuberculosis FRC41]
 gi|302205500|gb|ADL09842.1| 50S ribosomal protein L3 [Corynebacterium pseudotuberculosis C231]
 gi|302330055|gb|ADL20249.1| 50S ribosomal protein L3 [Corynebacterium pseudotuberculosis 1002]
 gi|308275736|gb|ADO25635.1| 50S ribosomal protein L3 [Corynebacterium pseudotuberculosis I19]
          Length = 218

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 84/214 (39%), Positives = 120/214 (56%), Gaps = 2/214 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT +++ + R IPVTV+    C V   RT++ +GY A+Q+  G+   +  +
Sbjct: 7   KGILGTKLGMTQIFDEDNRVIPVTVVEAGPCVVTQIRTIETDGYNAIQIAYGDIDPRKAN 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P++ + E R   D     +G   +   F     VDVTG T GKG++G
Sbjct: 67  KPATGHFKKAGVTPRRHVAEIR-MNDVSAYELGQDVTVEIFEGITFVDVTGTTKGKGYAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRH F G  A HG   +HR  G  G    PGRVFK  +MAGRMG +RVT +NL+V  +
Sbjct: 126 AMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGNDRVTTQNLKVQKI 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           D    LIL+KG +PG  +   + V+ + K   + 
Sbjct: 186 DADANLILIKGAIPG-NRGGIVTVKTAVKGGAHA 218


>gi|255536154|ref|YP_003096525.1| LSU ribosomal protein L3p (L3e) [Flavobacteriaceae bacterium
           3519-10]
 gi|255342350|gb|ACU08463.1| LSU ribosomal protein L3p (L3e) [Flavobacteriaceae bacterium
           3519-10]
          Length = 208

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 96/206 (46%), Positives = 136/206 (66%), Gaps = 3/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ +P TV+    C V+  RT++K+GY A Q+G  +   KNV 
Sbjct: 2   SGIIGKKIGMTSLFDENGKNMPCTVIQAGPCSVLQVRTIEKDGYKAAQLGFDDKSEKNVG 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K + G F     +PK KL EF   +  D L VG       F+ G+ VDVTG + GKGF G
Sbjct: 62  KALIGHFKKAGSAPKAKLVEFY-HEFVDKLSVGDEVKVDLFSQGEFVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRHNFGG ++ATHG     R+ GS G   DP RVFK  +MAGRMGG +VTV+NL+V+ 
Sbjct: 121 VVKRHNFGGVMQATHGQHNRLRAPGSIGAGSDPSRVFKGMRMAGRMGGKQVTVQNLQVLR 180

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           VD+++ L++VKG VPGA KNS++++R
Sbjct: 181 VDEEQNLLVVKGAVPGA-KNSYVIIR 205


>gi|290581289|ref|YP_003485681.1| 50S ribosomal protein L3 [Streptococcus mutans NN2025]
 gi|254998188|dbj|BAH88789.1| 50S ribosomal protein L3 [Streptococcus mutans NN2025]
          Length = 208

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG   +   F  G +VDVTG T GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGQEITVEQFEAGDVVDVTGTTKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    P RVFK K +AGRMGGNRVT++NLE+V
Sbjct: 118 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGNRVTIQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I+++ + K+A
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLIIIKSAVKAA 207


>gi|310829585|ref|YP_003961942.1| ribosomal protein L3 [Eubacterium limosum KIST612]
 gi|308741319|gb|ADO38979.1| ribosomal protein L3 [Eubacterium limosum KIST612]
          Length = 209

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 82/212 (38%), Positives = 118/212 (55%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT ++   G  +PVTV+    C VV  + +D +GY AVQ+  G+ K K 
Sbjct: 1   MKKAIIGKKIGMTQIFTENGTVVPVTVVEAGPCVVVQKKNMDVDGYEAVQLAYGDVKEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G +    V  KK + EF++  D D    G V     F  G  VD++G + GKGF
Sbjct: 61  VTKPLKGHYDKHGVEYKKVIREFKLD-DYDAFETGQVIKADMFEAGDKVDISGKSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HRS GS G    P RV K K + G+MG   VT  NLEVV
Sbjct: 120 QGVIKRHGQSRGPMAHG-SKYHRSPGSMGASAYPARVMKGKNLPGQMGNKNVTALNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  +  ++L+KG VPG  + S + ++ S K+
Sbjct: 179 QVSAEDNILLIKGAVPGP-RGSLVSIKSSVKA 209


>gi|226939186|ref|YP_002794257.1| 50S ribosomal protein L3 [Laribacter hongkongensis HLHK9]
 gi|254803677|sp|C1DAR7|RL3_LARHH RecName: Full=50S ribosomal protein L3
 gi|226714110|gb|ACO73248.1| RplC [Laribacter hongkongensis HLHK9]
          Length = 214

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 98/215 (45%), Positives = 131/215 (60%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V+  +G+ IPVTVL +   +V   +T D +GY AVQV  G  K   
Sbjct: 1   MSLGLVGRKVGMTRVFAEDGQSIPVTVLDMSANRVTQIKTADTDGYNAVQVAYGSKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V K   G F+   V   + L EF         L VG   +   F VGQLVDVTG + GKG
Sbjct: 61  VLKAEAGHFAKAGVEAGRGLKEFTADAAKLAELKVGDTLTVELFQVGQLVDVTGTSQGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNF   RA+HG S++ R+ GS G  QDPGRVF  K+MAG+ G  + TV++LEV
Sbjct: 121 FSGVIKRHNFSSNRASHGNSVTTRAPGSIGQAQDPGRVFPGKRMAGQYGNVKRTVQSLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           V +D +R L+L+KG VPG+K N  +++  + K+  
Sbjct: 181 VRIDAERQLLLIKGSVPGSKGNDVVVL-PAVKAGA 214


>gi|78064924|ref|YP_367693.1| 50S ribosomal protein L3 [Burkholderia sp. 383]
 gi|109893416|sp|Q39KG7|RL3_BURS3 RecName: Full=50S ribosomal protein L3
 gi|77965669|gb|ABB07049.1| LSU ribosomal protein L3P [Burkholderia sp. 383]
          Length = 217

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 96/212 (45%), Positives = 129/212 (60%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 2   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR+       L  G+V     F VGQ VDV G++IGKG
Sbjct: 62  VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGVDLFEVGQKVDVQGVSIGKG 121

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RATHG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 122 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 181

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             +D +R L+LVKG +PGA K   + V  + K
Sbjct: 182 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVK 212


>gi|297192703|ref|ZP_06910101.1| 50S ribosomal protein L3 [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197721642|gb|EDY65550.1| 50S ribosomal protein L3 [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 214

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 98/211 (46%), Positives = 128/211 (60%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            GV+  KLGMT V++   R +PVTV+    C V   RT D +GY +VQ+  GE   + V+
Sbjct: 6   KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDIDGYESVQIAFGEIDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G
Sbjct: 66  KPLKGHFAKADVTPRRHLVELR-TPDASEYTLGQEITAEVFESGVKVDVTGKSKGKGFAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +V
Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+L+KG VPG      +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214


>gi|228989319|ref|ZP_04149310.1| 50S ribosomal protein L3 [Bacillus pseudomycoides DSM 12442]
 gi|228995501|ref|ZP_04155169.1| 50S ribosomal protein L3 [Bacillus mycoides Rock3-17]
 gi|229003126|ref|ZP_04160972.1| 50S ribosomal protein L3 [Bacillus mycoides Rock1-4]
 gi|228758089|gb|EEM07288.1| 50S ribosomal protein L3 [Bacillus mycoides Rock1-4]
 gi|228764230|gb|EEM13109.1| 50S ribosomal protein L3 [Bacillus mycoides Rock3-17]
 gi|228770397|gb|EEM18970.1| 50S ribosomal protein L3 [Bacillus pseudomycoides DSM 12442]
          Length = 210

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 94/211 (44%), Positives = 132/211 (62%), Gaps = 4/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGELIPVTVIAATPNVVLQKKTTETDGYNAIQLGFDDKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  + +PK+ + E R   D D L VG       FT G++VDVTG++ GKGF
Sbjct: 61  TNKPEQGHTAKASTTPKRFIREIR-DADVDGLEVGQEVKVEVFTAGEIVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       +HG S  HR  GS G    P RVFK KK+AGRMGG++VT++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L+LVKG VPGAKK S ++V+ + K
Sbjct: 178 QVDAERNLLLVKGNVPGAKK-SLVVVQGAVK 207


>gi|288904273|ref|YP_003429494.1| ribosomal protein L3 [Streptococcus gallolyticus UCN34]
 gi|306830302|ref|ZP_07463473.1| 50S ribosomal protein L3 [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|320548055|ref|ZP_08042335.1| 50S ribosomal protein L3 [Streptococcus equinus ATCC 9812]
 gi|325977252|ref|YP_004286968.1| 50S ribosomal protein L3 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288730998|emb|CBI12542.1| ribosomal protein L3 [Streptococcus gallolyticus UCN34]
 gi|304427549|gb|EFM30650.1| 50S ribosomal protein L3 [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|320447297|gb|EFW88060.1| 50S ribosomal protein L3 [Streptococcus equinus ATCC 9812]
 gi|325177180|emb|CBZ47224.1| 50S ribosomal protein L3 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 208

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 93/213 (43%), Positives = 130/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG   +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGQEITVDTFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLEVV
Sbjct: 118 QGVIKRHGQARGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207


>gi|222056705|ref|YP_002539067.1| ribosomal protein L3 [Geobacter sp. FRC-32]
 gi|254803674|sp|B9M6U5|RL3_GEOSF RecName: Full=50S ribosomal protein L3
 gi|221565994|gb|ACM21966.1| ribosomal protein L3 [Geobacter sp. FRC-32]
          Length = 211

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 89/212 (41%), Positives = 123/212 (58%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++  +GRRIPVTV+    C V+  +T +K+GY A+QVG    +   
Sbjct: 1   MNKGLIGKKIGMTQIFADDGRRIPVTVVEAGPCVVIQKKTKEKDGYNAIQVGFDAKEAAK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +    G   +          E RV   D    VG V +   F  G ++DVTG +IGKGF
Sbjct: 61  ANSATVGHCKAAGSGAFSFFRELRVDNVDS-YNVGDVLNADLFAAGDVIDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR  F G R++HG S  HR+ GS GC   P RVFKNKKM G++G  RVTV+ L+VV
Sbjct: 120 QGVIKRWGFKGGRSSHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQLGNERVTVQRLKVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD    LILV G +PG+  N  + ++DS K+
Sbjct: 179 RVDAADNLILVGGAIPGS-TNGLVFIKDSVKA 209


>gi|297201729|ref|ZP_06919126.1| 50S ribosomal protein L3 [Streptomyces sviceus ATCC 29083]
 gi|197710896|gb|EDY54930.1| 50S ribosomal protein L3 [Streptomyces sviceus ATCC 29083]
          Length = 214

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 96/211 (45%), Positives = 127/211 (60%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+
Sbjct: 6   KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDADGYESVQIAFGEIDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G
Sbjct: 66  KPLKGHFAKADVTPRRHLVEIR-TADASEYTLGQEITAEVFEAGIKVDVTGKSKGKGFAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +V
Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+L+KG VPG      +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214


>gi|116628598|ref|YP_821217.1| 50S ribosomal protein L3 [Streptococcus thermophilus LMD-9]
 gi|122266808|sp|Q03IF1|RL3_STRTD RecName: Full=50S ribosomal protein L3
 gi|116101875|gb|ABJ67021.1| LSU ribosomal protein L3P [Streptococcus thermophilus LMD-9]
 gi|312279259|gb|ADQ63916.1| 50S ribosomal protein L3 [Streptococcus thermophilus ND03]
          Length = 208

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VGS  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSEITVDIFEAGDIVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKTA 207


>gi|29831469|ref|NP_826103.1| 50S ribosomal protein L3 [Streptomyces avermitilis MA-4680]
 gi|42559612|sp|Q82DP5|RL3_STRAW RecName: Full=50S ribosomal protein L3
 gi|29608584|dbj|BAC72638.1| putative ribosomal protein L3 [Streptomyces avermitilis MA-4680]
          Length = 214

 Score =  259 bits (662), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 96/211 (45%), Positives = 127/211 (60%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+
Sbjct: 6   KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDSDGYESVQIAFGEIDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G
Sbjct: 66  KPLKGHFAKADVTPRRHLVEIR-TADASEYTLGQEITAETFEAGVKVDVTGKSKGKGFAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +V
Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+L+KG VPG      +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214


>gi|261364855|ref|ZP_05977738.1| 50S ribosomal protein L3 [Neisseria mucosa ATCC 25996]
 gi|261378041|ref|ZP_05982614.1| 50S ribosomal protein L3 [Neisseria cinerea ATCC 14685]
 gi|298370591|ref|ZP_06981906.1| 50S ribosomal protein L3 [Neisseria sp. oral taxon 014 str. F0314]
 gi|269145491|gb|EEZ71909.1| 50S ribosomal protein L3 [Neisseria cinerea ATCC 14685]
 gi|288566904|gb|EFC88464.1| 50S ribosomal protein L3 [Neisseria mucosa ATCC 25996]
 gi|298281201|gb|EFI22691.1| 50S ribosomal protein L3 [Neisseria sp. oral taxon 014 str. F0314]
          Length = 214

 Score =  259 bits (662), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDADGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++    L  G   + S F VGQLVDVTG + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPGA  NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGAV-NSDVVVRPSVK 211


>gi|154507864|ref|ZP_02043506.1| hypothetical protein ACTODO_00346 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797498|gb|EDN79918.1| hypothetical protein ACTODO_00346 [Actinomyces odontolyticus ATCC
           17982]
          Length = 221

 Score =  259 bits (662), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 93/211 (44%), Positives = 133/211 (63%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
             ++ RKLGMT V++ +G  +P+TV+ +    V   RT + +GY A+Q+G GE   + V+
Sbjct: 13  KALLGRKLGMTQVWDADGHLVPLTVVQVGTNVVTQVRTDEVDGYSAIQLGFGEIDSRKVT 72

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F    V+P++ L E R  + D    +G     + F  G+ VDV+G T GKGF+G
Sbjct: 73  KPLQGHFEKAGVAPRRHLVEVRTSEHDS-YELGQELDATTFEAGEGVDVSGTTKGKGFAG 131

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    PGR+FK  +MAGRMGGNR TV+NL + +V
Sbjct: 132 VMKRHGFAGVSASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGGNRRTVQNLTIQAV 191

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+L+ G +PG  KN  +LVR S K A
Sbjct: 192 DAEKGLLLISGAIPGP-KNGVVLVRSSVKGA 221


>gi|291518045|emb|CBK73266.1| LSU ribosomal protein L3P [Butyrivibrio fibrisolvens 16/4]
          Length = 227

 Score =  259 bits (662), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 94/229 (41%), Positives = 122/229 (53%), Gaps = 19/229 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT V+N  G  IPVTVL    C V   +T++ +GY AVQVG  + KVK 
Sbjct: 1   MKKAILATKVGMTQVFNEGGELIPVTVLSAGPCVVTQIKTVENDGYDAVQVGFVDKKVKL 60

Query: 61  VSK----------------PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
           V+K                P +G F    V PK+ + EFR     D   +        F 
Sbjct: 61  VNKDANGRKEIIHRNGVNKPEKGHFDKAGVEPKRFVREFRFDNCAD-YALAQEIKADIFE 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  VD T  + GKGF GA+KR         HG S  HR  GS G    P RVFK K M 
Sbjct: 120 AGDKVDATATSKGKGFQGAIKRLGQHRGPMAHG-SKFHRHQGSNGACSSPSRVFKGKGMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           G+MGG RVT++NLE+V VD +  L+LVKG VPG KK S + +++S K+ 
Sbjct: 179 GQMGGTRVTIQNLEIVRVDVENNLLLVKGAVPGPKK-SLVTIKESVKAG 226


>gi|300775014|ref|ZP_07084877.1| 50S ribosomal protein L3 [Chryseobacterium gleum ATCC 35910]
 gi|300506829|gb|EFK37964.1| 50S ribosomal protein L3 [Chryseobacterium gleum ATCC 35910]
          Length = 208

 Score =  259 bits (662), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 99/206 (48%), Positives = 136/206 (66%), Gaps = 3/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT ++N EG+ IP TV+    C V+  RTL+K+GY AVQ+G  +   KNV 
Sbjct: 2   SGIIGKKIGMTSLFNEEGKNIPCTVIQAGPCSVLQVRTLEKDGYKAVQLGFDDKSEKNVG 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K + G F     +PK KL EF  ++  D + VG       F  G+ VDVTG + GKGF G
Sbjct: 62  KALAGHFKKAGSAPKAKLVEFY-REFVDEVKVGEEVKVDLFAEGEYVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG ++ATHG     R+ GS G   DP RVFK  +MAGRMGG +VTV+NL+V+ 
Sbjct: 121 VVKRHGFGGVMQATHGQHNRLRAPGSIGAGSDPSRVFKGMRMAGRMGGKQVTVQNLQVLK 180

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           VD ++ L++VKG VPGA KNS++++R
Sbjct: 181 VDQEQNLLVVKGAVPGA-KNSYVIIR 205


>gi|195977208|ref|YP_002122452.1| 50S ribosomal protein L3 [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|225867665|ref|YP_002743613.1| 50S ribosomal protein L3 [Streptococcus equi subsp. zooepidemicus]
 gi|226730570|sp|B4U500|RL3_STREM RecName: Full=50S ribosomal protein L3
 gi|259709735|sp|C0MCB0|RL3_STRS7 RecName: Full=50S ribosomal protein L3
 gi|195973913|gb|ACG61439.1| 50S ribosomal protein L3 [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|225700941|emb|CAW97644.1| 50S ribosomal protein L3 [Streptococcus equi subsp. zooepidemicus]
          Length = 208

 Score =  259 bits (662), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 91/213 (42%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY A+QVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAIQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDIFAAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207


>gi|291451913|ref|ZP_06591303.1| 50S ribosomal protein L3 [Streptomyces albus J1074]
 gi|291354862|gb|EFE81764.1| 50S ribosomal protein L3 [Streptomyces albus J1074]
          Length = 214

 Score =  259 bits (662), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 97/211 (45%), Positives = 127/211 (60%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   R +PVTV+      V   RT D +GY AVQ+  GE   + V+
Sbjct: 6   KGILGEKLGMTQVWDENNRVVPVTVVKAGANVVTQVRTNDTDGYEAVQIAFGEIDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G
Sbjct: 66  KPLKGHFAKADVTPRRHLVEIR-TADASEYTLGQELNADTFEAGLKVDVTGKSKGKGFAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +V
Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+L+KG VPG      +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214


>gi|294496983|ref|YP_003560683.1| 50S ribosomal protein L3 [Bacillus megaterium QM B1551]
 gi|294496985|ref|YP_003560685.1| 50S ribosomal protein L3 [Bacillus megaterium QM B1551]
 gi|295702350|ref|YP_003595425.1| 50S ribosomal protein L3 [Bacillus megaterium DSM 319]
 gi|294346920|gb|ADE67249.1| 50S ribosomal protein L3 [Bacillus megaterium QM B1551]
 gi|294346922|gb|ADE67251.1| 50S ribosomal protein L3 [Bacillus megaterium QM B1551]
 gi|294800009|gb|ADF37075.1| 50S ribosomal protein L3 [Bacillus megaterium DSM 319]
          Length = 209

 Score =  259 bits (662), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +  + +GY A+Q+G  + + K 
Sbjct: 1   MAKGILGRKIGMTQVFAENGDLIPVTVIEASANVVLQVKNAETDGYEAIQLGFEDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + E R   D     VG       F  G ++DVTG++ GKGF
Sbjct: 61  SNKPAKGHATKANTAPKRFIRELRGV-DASAYEVGQEVKVDIFAEGDVIDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH       +HG S  HR  GS G    P RVFK K + GRMGG R+TV+NL +V
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGERITVQNLSIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGA+K S + V+ + KS
Sbjct: 178 KVDAERNLLLVKGNVPGARK-SLVTVKSAVKS 208


>gi|71902709|ref|YP_279512.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS6180]
 gi|94987675|ref|YP_595776.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS9429]
 gi|94989555|ref|YP_597655.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS10270]
 gi|94991544|ref|YP_599643.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS2096]
 gi|209558627|ref|YP_002285099.1| 50S ribosomal protein L3 [Streptococcus pyogenes NZ131]
 gi|109893561|sp|Q48VU9|RL3_STRPM RecName: Full=50S ribosomal protein L3
 gi|122986963|sp|Q1JE59|RL3_STRPB RecName: Full=50S ribosomal protein L3
 gi|123382464|sp|Q1JJ62|RL3_STRPD RecName: Full=50S ribosomal protein L3
 gi|123382568|sp|Q1JP17|RL3_STRPC RecName: Full=50S ribosomal protein L3
 gi|226730577|sp|B5XJ36|RL3_STRPZ RecName: Full=50S ribosomal protein L3
 gi|71801804|gb|AAX71157.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS6180]
 gi|94541183|gb|ABF31232.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS9429]
 gi|94543063|gb|ABF33111.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10270]
 gi|94545052|gb|ABF35099.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS2096]
 gi|209539828|gb|ACI60404.1| LSU ribosomal protein L3p (L3e) [Streptococcus pyogenes NZ131]
          Length = 208

 Score =  259 bits (662), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 94/213 (44%), Positives = 132/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  S   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK++AGRMGGNRVTV+NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207


>gi|258512670|ref|YP_003186104.1| 50S ribosomal protein L3 [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257479396|gb|ACV59715.1| 50S ribosomal protein L3 [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 211

 Score =  259 bits (662), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 91/213 (42%), Positives = 124/213 (58%), Gaps = 4/213 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RKLGMT V+  +G  +PVTV+    C V+  R LDK+GY A+Q+G  + K    +
Sbjct: 2   KGILGRKLGMTQVFTEDGDVVPVTVIEAGPCVVLQKRVLDKDGYEAIQLGFADKKASRAT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G  +    +PK+ + E R     +   VG       F  G +VDVTG++ GKGF+G
Sbjct: 62  KPEIGHAAKAGTAPKRYIREIRGVN-VEEYEVGQQLKADIFAPGDMVDVTGVSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHN       HG S  HR  GS G    P R FK + MAGRMGG RVTV+NLEVV V
Sbjct: 121 PIKRHNQHRGPMAHG-SKYHRGVGSLGSIA-PNRTFKGQTMAGRMGGERVTVQNLEVVKV 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           D ++ +IL+KG VPG  +NS++ +R + K    
Sbjct: 179 DPEKNVILIKGSVPGP-RNSFVTIRSAVKQPAK 210


>gi|150392160|ref|YP_001322209.1| ribosomal protein L3 [Alkaliphilus metalliredigens QYMF]
 gi|189042829|sp|A6TWI2|RL3_ALKMQ RecName: Full=50S ribosomal protein L3
 gi|149952022|gb|ABR50550.1| ribosomal protein L3 [Alkaliphilus metalliredigens QYMF]
          Length = 210

 Score =  259 bits (662), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 86/209 (41%), Positives = 121/209 (57%), Gaps = 3/209 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT ++N +G   PVTV+ +    V   ++ + +GY +VQVG GE K+KN  
Sbjct: 2   KGLMGRKVGMTQIFNEDGIVTPVTVIEVAENVVTQIKSDETDGYNSVQVGYGEKKIKNTI 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F     +PK+ + EFRV   +     G       F  G  VDVTG++ GKGF G
Sbjct: 62  KPLQGHFEKAGTTPKRTMKEFRVDSTEG-FTAGQELKADLFQAGDKVDVTGISKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRH        HG S  HR  GS G    PGRVFK K + G MG  +VT +NLE+V V
Sbjct: 121 VIKRHGQSRGPMAHG-SRYHRRPGSMGASAYPGRVFKGKNLPGHMGNVQVTAQNLEIVRV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D ++ L+L+KG VPG KK   + ++ + K
Sbjct: 180 DLEKNLLLIKGAVPGPKKGVLV-IQTTVK 207


>gi|254670741|emb|CBA06972.1| 50S ribosomal protein L3 [Neisseria meningitidis alpha153]
 gi|261391678|emb|CAX49127.1| 50S ribosomal protein L3 [Neisseria meningitidis 8013]
          Length = 214

 Score =  259 bits (662), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++    L  G   + S F VGQLVDVTG + GKG
Sbjct: 61  VNKTEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPGA  NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGAV-NSDVVVRPSVK 211


>gi|118473190|ref|YP_885819.1| 50S ribosomal protein L3 [Mycobacterium smegmatis str. MC2 155]
 gi|166233163|sp|A0QSD1|RL3_MYCS2 RecName: Full=50S ribosomal protein L3
 gi|118174477|gb|ABK75373.1| ribosomal protein L3 [Mycobacterium smegmatis str. MC2 155]
          Length = 217

 Score =  259 bits (662), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 87/214 (40%), Positives = 126/214 (58%), Gaps = 3/214 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   + +PVTV+      V   RT +++GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTTERDGYSAVQLAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            KP+ G F++  V+P++ + E R+  +       VG   +   F+ G  VDVTG + GKG
Sbjct: 63  IKPVAGQFAAAGVNPRRHVAELRLDDEAAVAEYEVGQELTAEIFSDGAYVDVTGTSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKRH F G  A HG    HR  GS G    PGRVFK  +M+GRMG +RVT +NL+V
Sbjct: 123 FAGTMKRHGFRGQGAAHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGNDRVTTQNLKV 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             VD + G++L+KG +PG +    ++VR + K  
Sbjct: 183 HKVDAENGVLLIKGAIPG-RNGGLVVVRSAIKRG 215


>gi|21223082|ref|NP_628861.1| 50S ribosomal protein L3 [Streptomyces coelicolor A3(2)]
 gi|256785823|ref|ZP_05524254.1| 50S ribosomal protein L3 [Streptomyces lividans TK24]
 gi|289769715|ref|ZP_06529093.1| 50S ribosomal protein L3 [Streptomyces lividans TK24]
 gi|42559700|sp|Q9L0E0|RL3_STRCO RecName: Full=50S ribosomal protein L3
 gi|7321292|emb|CAB82070.1| 50S ribosomal protein L3 [Streptomyces coelicolor A3(2)]
 gi|289699914|gb|EFD67343.1| 50S ribosomal protein L3 [Streptomyces lividans TK24]
          Length = 214

 Score =  259 bits (662), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 92/211 (43%), Positives = 125/211 (59%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+
Sbjct: 6   KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F+  +V+P++ L E R         +G   +   F  G  VDVT  + GKGF+G
Sbjct: 66  KPLKGHFAKADVTPRRHLVEIR-TAAASEYTLGQEITAEAFESGVKVDVTAKSKGKGFAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF G +A+HG    HR  GS G    PGRVFK  +MAGRMG  RVT +NL V +V
Sbjct: 125 VMKRHNFKGGKASHGAHRVHRMPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTVHAV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+L+KG VPG      +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214


>gi|315925256|ref|ZP_07921470.1| 50S ribosomal protein L3 [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315621490|gb|EFV01457.1| 50S ribosomal protein L3 [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 211

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 86/213 (40%), Positives = 121/213 (56%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT ++  +G  +PVTV+    C VV  +TL+ +GY AVQ+  G+ K KN
Sbjct: 1   MKKAIIGKKIGMTQIFQEDGTVVPVTVVQAGPCTVVQKKTLENDGYEAVQLAYGDIKEKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V KP++G F    V   + L EFR+  D   L  G       F  G  VDV+G + GKG+
Sbjct: 61  VVKPVKGHFDKYGVDYARTLREFRLD-DCASLEAGQKIKADVFEAGDKVDVSGKSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GA+KR         HG S  HRS GS G    P RV K K +AG+MG   VT  NLE++
Sbjct: 120 AGAIKRWGQQRGPMAHG-SKYHRSAGSMGASAYPARVPKGKHLAGQMGNKNVTALNLEII 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            VD +  L+L+KG VPG  +   + V+ S K+A
Sbjct: 179 QVDAENNLLLIKGAVPGP-RGGVVSVKSSVKAA 210


>gi|167582623|ref|ZP_02375497.1| 50S ribosomal protein L3 [Burkholderia thailandensis TXDOH]
 gi|167620737|ref|ZP_02389368.1| 50S ribosomal protein L3 [Burkholderia thailandensis Bt4]
          Length = 219

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 99/212 (46%), Positives = 132/212 (62%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR++ D    L  G+V  P  F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVQAGEILKEFRIEADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NFG  RA+HG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             +D  R L+LVKG VPGA K   + V  + K
Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211


>gi|327438278|dbj|BAK14643.1| ribosomal protein L3 [Solibacillus silvestris StLB046]
          Length = 209

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 89/212 (41%), Positives = 128/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  ++++ +GY A+Q+G  + +VK 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKSVETDGYEAIQLGFEDKRVKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EFR   +     VG       F  G ++DVTG+T GKGF
Sbjct: 61  SNKPEQGHVAKANTAPKRFIREFR-NLEAATYEVGQEVKVEIFAEGDVIDVTGVTKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       +HG S  HR  GS G    P RVFK KK+ G+MGG  VT++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKQKKLPGQMGGTVVTIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPG+KK + + V+ + KS
Sbjct: 178 KVDVERNLLLVKGNVPGSKK-ALVTVKTAIKS 208


>gi|29374851|ref|NP_814004.1| 50S ribosomal protein L3 [Enterococcus faecalis V583]
 gi|227519992|ref|ZP_03950041.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0104]
 gi|227555853|ref|ZP_03985900.1| 50S ribosomal protein L3 [Enterococcus faecalis HH22]
 gi|229546964|ref|ZP_04435689.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1322]
 gi|229550553|ref|ZP_04439278.1| 50S ribosomal protein L3 [Enterococcus faecalis ATCC 29200]
 gi|255971709|ref|ZP_05422295.1| 50S ribosomal protein L3 [Enterococcus faecalis T1]
 gi|255974709|ref|ZP_05425295.1| 50S ribosomal protein L3 [Enterococcus faecalis T2]
 gi|256618380|ref|ZP_05475226.1| 50S ribosomal protein L3 [Enterococcus faecalis ATCC 4200]
 gi|256762003|ref|ZP_05502583.1| 50S ribosomal protein L3 [Enterococcus faecalis T3]
 gi|256855163|ref|ZP_05560524.1| ribosomal protein L3 [Enterococcus faecalis T8]
 gi|256956862|ref|ZP_05561033.1| 50S ribosomal protein L3 [Enterococcus faecalis DS5]
 gi|256960669|ref|ZP_05564840.1| 50S ribosomal protein L3 [Enterococcus faecalis Merz96]
 gi|256964132|ref|ZP_05568303.1| 50S ribosomal protein L3 [Enterococcus faecalis HIP11704]
 gi|257078532|ref|ZP_05572893.1| 50S ribosomal protein L3 [Enterococcus faecalis JH1]
 gi|257081497|ref|ZP_05575858.1| 50S ribosomal protein L3 [Enterococcus faecalis E1Sol]
 gi|257084145|ref|ZP_05578506.1| 50S ribosomal protein L3 [Enterococcus faecalis Fly1]
 gi|257087972|ref|ZP_05582333.1| 50S ribosomal protein L3 [Enterococcus faecalis D6]
 gi|257088649|ref|ZP_05583010.1| 50S ribosomal protein L3 [Enterococcus faecalis CH188]
 gi|257417576|ref|ZP_05594570.1| 50S ribosomal protein L3 [Enterococcus faecalis AR01/DG]
 gi|257418699|ref|ZP_05595693.1| 50S ribosomal protein L3 [Enterococcus faecalis T11]
 gi|257421500|ref|ZP_05598490.1| 50S ribosomal protein L3 [Enterococcus faecalis X98]
 gi|293382758|ref|ZP_06628683.1| 50S ribosomal protein L3 [Enterococcus faecalis R712]
 gi|293388059|ref|ZP_06632587.1| 50S ribosomal protein L3 [Enterococcus faecalis S613]
 gi|294781051|ref|ZP_06746402.1| 50S ribosomal protein L3 [Enterococcus faecalis PC1.1]
 gi|300862213|ref|ZP_07108293.1| 50S ribosomal protein L3 [Enterococcus faecalis TUSoD Ef11]
 gi|307269087|ref|ZP_07550448.1| 50S ribosomal protein L3 [Enterococcus faecalis TX4248]
 gi|307274171|ref|ZP_07555379.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0855]
 gi|307276396|ref|ZP_07557519.1| 50S ribosomal protein L3 [Enterococcus faecalis TX2134]
 gi|307278606|ref|ZP_07559676.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0860]
 gi|307287014|ref|ZP_07567089.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0109]
 gi|307291645|ref|ZP_07571520.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0411]
 gi|312901122|ref|ZP_07760410.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0470]
 gi|312904684|ref|ZP_07763839.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0635]
 gi|312908653|ref|ZP_07767595.1| 50S ribosomal protein L3 [Enterococcus faecalis DAPTO 512]
 gi|312909199|ref|ZP_07768056.1| 50S ribosomal protein L3 [Enterococcus faecalis DAPTO 516]
 gi|312952607|ref|ZP_07771471.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0102]
 gi|42559615|sp|Q839G4|RL3_ENTFA RecName: Full=50S ribosomal protein L3
 gi|29342309|gb|AAO80075.1| ribosomal protein L3 [Enterococcus faecalis V583]
 gi|227072540|gb|EEI10503.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0104]
 gi|227175020|gb|EEI55992.1| 50S ribosomal protein L3 [Enterococcus faecalis HH22]
 gi|229304272|gb|EEN70268.1| 50S ribosomal protein L3 [Enterococcus faecalis ATCC 29200]
 gi|229307892|gb|EEN73879.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1322]
 gi|255962727|gb|EET95203.1| 50S ribosomal protein L3 [Enterococcus faecalis T1]
 gi|255967581|gb|EET98203.1| 50S ribosomal protein L3 [Enterococcus faecalis T2]
 gi|256597907|gb|EEU17083.1| 50S ribosomal protein L3 [Enterococcus faecalis ATCC 4200]
 gi|256683254|gb|EEU22949.1| 50S ribosomal protein L3 [Enterococcus faecalis T3]
 gi|256709676|gb|EEU24723.1| ribosomal protein L3 [Enterococcus faecalis T8]
 gi|256947358|gb|EEU63990.1| 50S ribosomal protein L3 [Enterococcus faecalis DS5]
 gi|256951165|gb|EEU67797.1| 50S ribosomal protein L3 [Enterococcus faecalis Merz96]
 gi|256954628|gb|EEU71260.1| 50S ribosomal protein L3 [Enterococcus faecalis HIP11704]
 gi|256986562|gb|EEU73864.1| 50S ribosomal protein L3 [Enterococcus faecalis JH1]
 gi|256989527|gb|EEU76829.1| 50S ribosomal protein L3 [Enterococcus faecalis E1Sol]
 gi|256992175|gb|EEU79477.1| 50S ribosomal protein L3 [Enterococcus faecalis Fly1]
 gi|256996002|gb|EEU83304.1| 50S ribosomal protein L3 [Enterococcus faecalis D6]
 gi|256997461|gb|EEU83981.1| 50S ribosomal protein L3 [Enterococcus faecalis CH188]
 gi|257159404|gb|EEU89364.1| 50S ribosomal protein L3 [Enterococcus faecalis ARO1/DG]
 gi|257160527|gb|EEU90487.1| 50S ribosomal protein L3 [Enterococcus faecalis T11]
 gi|257163324|gb|EEU93284.1| 50S ribosomal protein L3 [Enterococcus faecalis X98]
 gi|291079918|gb|EFE17282.1| 50S ribosomal protein L3 [Enterococcus faecalis R712]
 gi|291082510|gb|EFE19473.1| 50S ribosomal protein L3 [Enterococcus faecalis S613]
 gi|294451854|gb|EFG20305.1| 50S ribosomal protein L3 [Enterococcus faecalis PC1.1]
 gi|295112506|emb|CBL31143.1| LSU ribosomal protein L3P [Enterococcus sp. 7L76]
 gi|300848738|gb|EFK76495.1| 50S ribosomal protein L3 [Enterococcus faecalis TUSoD Ef11]
 gi|306497264|gb|EFM66806.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0411]
 gi|306501960|gb|EFM71249.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0109]
 gi|306504666|gb|EFM73866.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0860]
 gi|306506876|gb|EFM76023.1| 50S ribosomal protein L3 [Enterococcus faecalis TX2134]
 gi|306509133|gb|EFM78195.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0855]
 gi|306514567|gb|EFM83121.1| 50S ribosomal protein L3 [Enterococcus faecalis TX4248]
 gi|310625440|gb|EFQ08723.1| 50S ribosomal protein L3 [Enterococcus faecalis DAPTO 512]
 gi|310629395|gb|EFQ12678.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0102]
 gi|310632036|gb|EFQ15319.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0635]
 gi|311290441|gb|EFQ68997.1| 50S ribosomal protein L3 [Enterococcus faecalis DAPTO 516]
 gi|311291794|gb|EFQ70350.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0470]
 gi|315026835|gb|EFT38767.1| 50S ribosomal protein L3 [Enterococcus faecalis TX2137]
 gi|315028875|gb|EFT40807.1| 50S ribosomal protein L3 [Enterococcus faecalis TX4000]
 gi|315031139|gb|EFT43071.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0017]
 gi|315036015|gb|EFT47947.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0027]
 gi|315145336|gb|EFT89352.1| 50S ribosomal protein L3 [Enterococcus faecalis TX2141]
 gi|315147171|gb|EFT91187.1| 50S ribosomal protein L3 [Enterococcus faecalis TX4244]
 gi|315151071|gb|EFT95087.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0012]
 gi|315153609|gb|EFT97625.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0031]
 gi|315156211|gb|EFU00228.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0043]
 gi|315158644|gb|EFU02661.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0312]
 gi|315160728|gb|EFU04745.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0645]
 gi|315165901|gb|EFU09918.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1302]
 gi|315168100|gb|EFU12117.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1341]
 gi|315171460|gb|EFU15477.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1342]
 gi|315172694|gb|EFU16711.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1346]
 gi|315573514|gb|EFU85705.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0309B]
 gi|315579326|gb|EFU91517.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0630]
 gi|315582138|gb|EFU94329.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0309A]
 gi|323479422|gb|ADX78861.1| 50S ribosomal protein L3 [Enterococcus faecalis 62]
 gi|327534004|gb|AEA92838.1| 50S ribosomal protein L3 [Enterococcus faecalis OG1RF]
 gi|329577749|gb|EGG59175.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1467]
          Length = 209

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 130/212 (61%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY A+QVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQVKTVETDGYEAIQVGYQDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF+   +     VG       F  G +VDVTG T GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIKEFK-NVELGEYEVGKEIKVDVFQAGDVVDVTGTTKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH       +HG S  HR  GS G    P RVFKNK++AGRMGG+RVT++NLEVV
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGDRVTIQNLEVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R +IL+KG +PGAKK S I ++ + K+
Sbjct: 178 KVDVERNVILIKGNIPGAKK-SLITIKSAVKA 208


>gi|319942173|ref|ZP_08016489.1| 50S ribosomal protein L3 [Sutterella wadsworthensis 3_1_45B]
 gi|319804226|gb|EFW01118.1| 50S ribosomal protein L3 [Sutterella wadsworthensis 3_1_45B]
          Length = 214

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 100/212 (47%), Positives = 134/212 (63%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           + G+V RK+GMT ++  +G  +PVTVL + N +V + +T D +GY AVQV  G  K   V
Sbjct: 4   KLGLVGRKIGMTRIFTDDGVSVPVTVLDVSNNRVTMVKTQDTDGYTAVQVAFGTKKPSRV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           SKP+ G F+   V     L EFR+  +       G   S   FT GQ VDVTG TIGKGF
Sbjct: 64  SKPLAGQFAKAGVEAACTLKEFRIDAEKAAEFKPGQTISVEIFTEGQKVDVTGTTIGKGF 123

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GA+KRH+F   RA+HG S++ R+ GS G RQDPGRVF  K+MAG +G  + T +NL V 
Sbjct: 124 AGAIKRHHFSSNRASHGNSVTTRAPGSIGNRQDPGRVFPGKRMAGHLGDVQRTTQNLVVA 183

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LV+G VPGA K   ++VR + K+
Sbjct: 184 RVDKERQLLLVRGAVPGA-KGGEVIVRPAVKA 214


>gi|313667441|ref|YP_004047725.1| 50S ribosomal protein L3 [Neisseria lactamica ST-640]
 gi|313004903|emb|CBN86329.1| 50S ribosomal protein L3 [Neisseria lactamica 020-06]
          Length = 214

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDD-LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++    L  G   + S F VGQLVDVTG + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLIEFALTEEKPVELKAGDEITVSMFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPGA  NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGAV-NSDVVVRPSVK 211


>gi|329298533|ref|ZP_08255869.1| 50S ribosomal protein L3 [Plautia stali symbiont]
          Length = 208

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 129/210 (61%), Gaps = 3/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  EG  IPVTV+ ++  +V   + L+ +GY A+QV  G  K   V 
Sbjct: 2   IGLVGKKVGMTRIFTEEGVSIPVTVIEVEANRVTQVKGLENDGYQAIQVTTGAKKANRVG 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR +   +   VG   S   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRTEG--EEYSVGQSISVEIFADVKKVDVTGTSKGKGFVG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++LE+V V
Sbjct: 120 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLEIVRV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+LVKG VPGA   S + V+ + K+
Sbjct: 180 DAERNLLLVKGAVPGA-TGSDLFVKPAVKA 208


>gi|261400052|ref|ZP_05986177.1| 50S ribosomal protein L3 [Neisseria lactamica ATCC 23970]
 gi|269210278|gb|EEZ76733.1| 50S ribosomal protein L3 [Neisseria lactamica ATCC 23970]
          Length = 214

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 105/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++    L  G   + S F VGQLVDVTG + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPGA  NS I+VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGAV-NSNIVVRPSVK 211


>gi|315649699|ref|ZP_07902783.1| 50S ribosomal protein L3 [Paenibacillus vortex V453]
 gi|315274887|gb|EFU38263.1| 50S ribosomal protein L3 [Paenibacillus vortex V453]
          Length = 207

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 85/210 (40%), Positives = 118/210 (56%), Gaps = 4/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RKLGMT V+  EG  IPVTV+    C V+  + L+ +GY A+QVG  + K    +
Sbjct: 2   KGILGRKLGMTQVFTPEGIVIPVTVIEAGPCVVLQKKDLENDGYEAIQVGFSDKKENRSN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G     N +PK+ + E R   D   + VG       F  G+ VDVTG++ GKGF G
Sbjct: 62  KPEAGHAKKANTAPKRYVREIRGV-DLASVEVGQELKADVFAEGEFVDVTGISKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR        +HG S  HR  GS G  Q   RV K K++ G MG   VT++ LEVV V
Sbjct: 121 VIKRWGQSRGPMSHG-SRYHRRPGSMGSIQ-ANRVPKGKRLPGHMGNETVTIQKLEVVRV 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R +ILVKG +PG KK  ++ ++++ K 
Sbjct: 179 DAERNVILVKGSIPGPKKG-FVQIKETVKK 207


>gi|19745241|ref|NP_606377.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS8232]
 gi|21909576|ref|NP_663844.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS315]
 gi|28894954|ref|NP_801304.1| 50S ribosomal protein L3 [Streptococcus pyogenes SSI-1]
 gi|71909858|ref|YP_281408.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS5005]
 gi|139472927|ref|YP_001127642.1| 50S ribosomal protein L3 [Streptococcus pyogenes str. Manfredo]
 gi|251781515|ref|YP_002995816.1| 50S ribosomal protein L3 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|306828260|ref|ZP_07461520.1| 50S ribosomal protein L3 [Streptococcus pyogenes ATCC 10782]
 gi|42559572|sp|P60451|RL3_STRP3 RecName: Full=50S ribosomal protein L3
 gi|42559573|sp|P60452|RL3_STRP8 RecName: Full=50S ribosomal protein L3
 gi|166234599|sp|A2RC14|RL3_STRPG RecName: Full=50S ribosomal protein L3
 gi|19747335|gb|AAL96876.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS8232]
 gi|21903757|gb|AAM78647.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS315]
 gi|28810199|dbj|BAC63137.1| 50S ribosomal protein L3 [Streptococcus pyogenes SSI-1]
 gi|71852640|gb|AAZ50663.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS5005]
 gi|134271173|emb|CAM29386.1| 50S ribosomal protein L3 [Streptococcus pyogenes str. Manfredo]
 gi|242390143|dbj|BAH80602.1| 50S ribosomal protein L3 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|304429571|gb|EFM32620.1| 50S ribosomal protein L3 [Streptococcus pyogenes ATCC 10782]
 gi|323126311|gb|ADX23608.1| 50S ribosomal protein L3 [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 208

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 95/213 (44%), Positives = 132/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  S   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK++AGRMGGNRVTV+NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +ILVKG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILVKGNVPGAKK-SLITIKSAVKAA 207


>gi|254470259|ref|ZP_05083663.1| ribosomal protein L3 [Pseudovibrio sp. JE062]
 gi|211960570|gb|EEA95766.1| ribosomal protein L3 [Pseudovibrio sp. JE062]
          Length = 227

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 125/209 (59%), Positives = 157/209 (75%), Gaps = 2/209 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT +YN  G  +PVTVL LDNCQVV HRT +KNGY A+Q+G G AKVKN ++ MRG F+ 
Sbjct: 1   MTRIYNEAGEHVPVTVLRLDNCQVVAHRTAEKNGYTALQLGVGAAKVKNTNRAMRGHFAV 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             V PK+KL EFRV ++ +++ VG+  +  +F  GQ VDVTG +IGKGF+GAMKRHNFGG
Sbjct: 61  AKVEPKRKLAEFRVSEE-NMIEVGAELTADHFLNGQFVDVTGTSIGKGFAGAMKRHNFGG 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
            RA+HGVSISHR+HGSTG  QDPG+VFK KKMAG +G  RVT +NL+VV  D +RGLI+V
Sbjct: 120 GRASHGVSISHRAHGSTGQCQDPGKVFKGKKMAGHLGAERVTTQNLKVVRTDVERGLIMV 179

Query: 192 KGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
           +G VPG+ K  WILVRD+ K ++     V
Sbjct: 180 EGSVPGS-KGGWILVRDAIKKSLPENAPV 207


>gi|239997926|ref|ZP_04717850.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae 35/02]
 gi|240017545|ref|ZP_04724085.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae FA6140]
 gi|240113966|ref|ZP_04728456.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae MS11]
 gi|240116700|ref|ZP_04730762.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID18]
 gi|240118922|ref|ZP_04732984.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID1]
 gi|240124671|ref|ZP_04737557.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-92-679]
 gi|254494721|ref|ZP_05107892.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae 1291]
 gi|268593776|ref|ZP_06127943.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae 35/02]
 gi|268600030|ref|ZP_06134197.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae MS11]
 gi|268602368|ref|ZP_06136535.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID18]
 gi|268604631|ref|ZP_06138798.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID1]
 gi|268683245|ref|ZP_06150107.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-92-679]
 gi|226513761|gb|EEH63106.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae 1291]
 gi|268547165|gb|EEZ42583.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae 35/02]
 gi|268584161|gb|EEZ48837.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae MS11]
 gi|268586499|gb|EEZ51175.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID18]
 gi|268588762|gb|EEZ53438.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID1]
 gi|268623529|gb|EEZ55929.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-92-679]
          Length = 214

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++    L  G   + S F VGQLVDVTG + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGVAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPGA  NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGAV-NSDVVVRPSVK 211


>gi|313889584|ref|ZP_07823229.1| 50S ribosomal protein L3 [Streptococcus pseudoporcinus SPIN 20026]
 gi|313122093|gb|EFR45187.1| 50S ribosomal protein L3 [Streptococcus pseudoporcinus SPIN 20026]
          Length = 208

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 92/213 (43%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207


>gi|293190259|ref|ZP_06608755.1| 50S ribosomal protein L3 [Actinomyces odontolyticus F0309]
 gi|292821075|gb|EFF80028.1| 50S ribosomal protein L3 [Actinomyces odontolyticus F0309]
          Length = 221

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 93/211 (44%), Positives = 133/211 (63%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
             ++ RKLGMT V++ +G  +P+TV+ +    V   RT + +GY A+Q+G GE   + V+
Sbjct: 13  KALLGRKLGMTQVWDADGHLVPLTVVQVGTNVVTQVRTDEVDGYSAIQLGFGEIDSRKVT 72

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F    V+P++ L E R  + D    +G     + F  G+ VDV+G T GKGF+G
Sbjct: 73  KPLQGHFEKAGVAPRRHLVEVRTSEQDSF-ELGQELDATTFEAGEGVDVSGTTKGKGFAG 131

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    PGR+FK  +MAGRMGGNR TV+NL + +V
Sbjct: 132 VMKRHGFAGVSASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGGNRRTVQNLTIQAV 191

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+L+ G +PG  KN  +LVR S K A
Sbjct: 192 DAEKGLLLISGAIPGP-KNGVVLVRSSVKGA 221


>gi|239918199|ref|YP_002957757.1| LSU ribosomal protein L3P [Micrococcus luteus NCTC 2665]
 gi|281415610|ref|ZP_06247352.1| 50S ribosomal protein L3 [Micrococcus luteus NCTC 2665]
 gi|239839406|gb|ACS31203.1| LSU ribosomal protein L3P [Micrococcus luteus NCTC 2665]
          Length = 216

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 90/211 (42%), Positives = 124/211 (58%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++ + + IPVTV+  D   V   R+ + +GY AVQ+  G+   + V+
Sbjct: 8   KGLLGTKLGMTQVWDEDNKLIPVTVVKADPNVVTQLRSEETDGYTAVQIAYGQIDPRRVT 67

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    V+P++ L E R   D     +G   +   F  GQ VDV G T GKGF+G
Sbjct: 68  KPLAGHFEKAGVTPRRHLVELR-TADAAEYSLGQDVTVEVFEAGQKVDVVGTTKGKGFAG 126

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRH F G+ A+HG   +HR  GS G    PGRVFK ++M GRMG  R T  NL +  +
Sbjct: 127 AMKRHGFAGVGASHGAHKNHRKPGSVGGASTPGRVFKGQRMPGRMGAVRQTTMNLTLHGI 186

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D +  L+L+KG VPG+ K   +LVR + K A
Sbjct: 187 DVENNLLLIKGAVPGS-KGQVVLVRSAVKGA 216


>gi|295838404|ref|ZP_06825337.1| 50S ribosomal protein L3 [Streptomyces sp. SPB74]
 gi|302519661|ref|ZP_07272003.1| 50S ribosomal protein L3 [Streptomyces sp. SPB78]
 gi|318058128|ref|ZP_07976851.1| 50S ribosomal protein L3 [Streptomyces sp. SA3_actG]
 gi|318076019|ref|ZP_07983351.1| 50S ribosomal protein L3 [Streptomyces sp. SA3_actF]
 gi|197695799|gb|EDY42732.1| 50S ribosomal protein L3 [Streptomyces sp. SPB74]
 gi|302428556|gb|EFL00372.1| 50S ribosomal protein L3 [Streptomyces sp. SPB78]
          Length = 214

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 97/211 (45%), Positives = 128/211 (60%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   R +PVTV+    C V   RT D +GY +VQ+  GE   + V+
Sbjct: 6   KGILGEKLGMTQVWDDNNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G
Sbjct: 66  KPLKGHFAKADVTPRRHLVEIRTS-DSSEYTLGQEVTAETFESGVKVDVTGKSKGKGFAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +V
Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+L+KG VPG      +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214


>gi|24380367|ref|NP_722322.1| 50S ribosomal protein L3 [Streptococcus mutans UA159]
 gi|42559636|sp|Q8DS16|RL3_STRMU RecName: Full=50S ribosomal protein L3
 gi|24378386|gb|AAN59628.1|AE015024_20 50S ribosomal protein L3 [Streptococcus mutans UA159]
          Length = 208

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 94/213 (44%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  + +PK+ + EF   K+ + L VG   +   F  G +VDVTG T GKGF
Sbjct: 61  SNKPAKGHVAKADTAPKRFIREF---KNIEGLEVGQEITVEQFEAGDVVDVTGTTKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    P RVFK K +AGRMGGNRVTV+NLEVV
Sbjct: 118 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGNRVTVQNLEVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I+++ + K+A
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLIIIKSAVKAA 207


>gi|299541932|ref|ZP_07052255.1| 50S ribosomal protein L3 [Lysinibacillus fusiformis ZC1]
 gi|298725670|gb|EFI66311.1| 50S ribosomal protein L3 [Lysinibacillus fusiformis ZC1]
          Length = 209

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 128/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY A+QVG  + +VK 
Sbjct: 1   MAKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTVETDGYEAIQVGFEDKRVKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EFR   + +   VG       F  G ++DVTG+T GKGF
Sbjct: 61  SNKPEQGHVAKANTAPKRFIREFR-NVNVEEYEVGQEVKVEIFAEGDVIDVTGVTKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFK KK+ G+MGGN VT++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKQKKLPGQMGGNVVTIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  R L+LVKG VPG+KK + + V+ + K+
Sbjct: 178 KVDTDRNLLLVKGNVPGSKK-ALVTVKTAIKA 208


>gi|261380559|ref|ZP_05985132.1| 50S ribosomal protein L3 [Neisseria subflava NJ9703]
 gi|284796527|gb|EFC51874.1| 50S ribosomal protein L3 [Neisseria subflava NJ9703]
          Length = 214

 Score =  258 bits (660), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 104/212 (49%), Positives = 136/212 (64%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+  +V   + L EF + ++    L VG   + S F VGQLVDVTG + GKG
Sbjct: 61  VNKTEAGHFAKASVEAGRGLVEFALTEEKLAELKVGDEITVSMFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPG+  NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGSV-NSDVVVRPSVK 211


>gi|299135257|ref|ZP_07028448.1| 50S ribosomal protein L3 [Afipia sp. 1NLS2]
 gi|298590234|gb|EFI50438.1| 50S ribosomal protein L3 [Afipia sp. 1NLS2]
          Length = 243

 Score =  258 bits (660), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 127/218 (58%), Positives = 157/218 (72%), Gaps = 2/218 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  IPVTVL L NCQVV HRT DKNGY A+Q+G+G  K   
Sbjct: 1   MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLGNCQVVGHRTKDKNGYTALQLGSGARKSVY 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + K  RG F+   V PK+K+ EFRV  DD ++PVG+  +  +F  GQ VDVTG ++GKGF
Sbjct: 61  MPKAERGQFAVAKVEPKRKVVEFRVS-DDAVIPVGAEITADHFVAGQFVDVTGTSVGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T  NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
             D +RGL+LV+G VPG+ K  WI VRD+ K  +  + 
Sbjct: 180 QTDVERGLLLVEGAVPGS-KGGWITVRDAVKKPLPKEA 216


>gi|322390660|ref|ZP_08064174.1| 50S ribosomal protein L3 [Streptococcus parasanguinis ATCC 903]
 gi|321142633|gb|EFX38097.1| 50S ribosomal protein L3 [Streptococcus parasanguinis ATCC 903]
          Length = 208

 Score =  258 bits (660), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 89/213 (41%), Positives = 128/213 (60%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY A+QVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG   +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNVEGLEVGDEITVDTFEAGDIVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFK K +AGRMGG+RVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+ 
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAG 207


>gi|317131369|ref|YP_004090683.1| 50S ribosomal protein L3 [Ethanoligenens harbinense YUAN-3]
 gi|315469348|gb|ADU25952.1| 50S ribosomal protein L3 [Ethanoligenens harbinense YUAN-3]
          Length = 211

 Score =  258 bits (660), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 89/213 (41%), Positives = 128/213 (60%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +K+GMT +++  G  IPVTV+    C VV  +T++ +GY +VQ+G  E + K 
Sbjct: 1   MQKGIIGKKIGMTQLFDERGNVIPVTVIEAGPCVVVQKKTVEVDGYESVQLGFEEVREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G F    V+ K+ L EFR+ +D   L VG +     F  G  VDV G + GKG+
Sbjct: 61  LNKPEKGHFEKAGVASKRVLREFRL-EDMSALNVGDIVKADVFAAGDRVDVAGTSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR     L+ THG    HR  GS G   +  RV K KKMAG+MG  RVTV+NL+VV
Sbjct: 120 AGVIKRWGHHRLKMTHGTGPVHREVGSMGASTNMSRVPKGKKMAGQMGNERVTVQNLDVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            VD +  LI +KG +PG  K   +++ DS K A
Sbjct: 180 KVDAENNLIALKGAIPGP-KGGIVILADSVKKA 211


>gi|328955914|ref|YP_004373247.1| LSU ribosomal protein L3P [Coriobacterium glomerans PW2]
 gi|328456238|gb|AEB07432.1| LSU ribosomal protein L3P [Coriobacterium glomerans PW2]
          Length = 206

 Score =  258 bits (660), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 88/209 (42%), Positives = 119/209 (56%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M S ++ RK+GMT V++     +PVTV+    C V   +T   +GY AVQ+G G+ + K+
Sbjct: 1   MVSMILGRKIGMTQVWDENDNVVPVTVIQAGPCYVSQVKTEATDGYDAVQIGFGDIRAKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++PM G F+   V P + L E RV    +   VG   + + F   + VDV G + GKGF
Sbjct: 61  VNRPMAGHFAKAGVEPVRYLREVRV-PAGEQHSVGDPVTVADFEGTEKVDVIGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR        THG    HR  GS G    P RV K  KMAG MG +RVTVKNL VV
Sbjct: 120 QGRIKRWGQHRGPMTHGSH-FHRHPGSIGQCAYPSRVLKGLKMAGHMGNDRVTVKNLSVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            +D ++ LILVKG VPGA K+  + +R +
Sbjct: 179 RIDAEQNLILVKGAVPGA-KSGLVCIRMA 206


>gi|171060669|ref|YP_001793018.1| 50S ribosomal protein L3 [Leptothrix cholodnii SP-6]
 gi|212288405|sp|B1Y8I7|RL3_LEPCP RecName: Full=50S ribosomal protein L3
 gi|170778114|gb|ACB36253.1| ribosomal protein L3 [Leptothrix cholodnii SP-6]
          Length = 226

 Score =  258 bits (660), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 97/215 (45%), Positives = 130/215 (60%), Gaps = 2/215 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ RK+GM  ++  +G  +PVTVL + N +V   +T++ +GY AVQV  G  K   V
Sbjct: 9   RLGLLGRKVGMMRIFTDDGDAVPVTVLDVSNNRVAQIKTVETDGYSAVQVAFGARKASRV 68

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLL-PVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +KP  G  +   V   + L EFRV  +       GS    + F  GQ VDV G TIGKGF
Sbjct: 69  TKPEAGHLAKAGVESGELLQEFRVSAEVAAECKPGSQLPIAMFQAGQQVDVQGTTIGKGF 128

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH+FG  RA+HG S SH   GS    QDPGRVF  KKM+G +G + VT +NL+VV
Sbjct: 129 AGTIKRHHFGSQRASHGNSRSHNVPGSISMAQDPGRVFPGKKMSGHLGDDTVTTQNLDVV 188

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            VD+ R L+LVKG VPGA K  ++ VR + K  + 
Sbjct: 189 RVDEARQLLLVKGAVPGA-KGGFVTVRPAVKVKLK 222


>gi|293375389|ref|ZP_06621670.1| 50S ribosomal protein L3 [Turicibacter sanguinis PC909]
 gi|325844417|ref|ZP_08168144.1| 50S ribosomal protein L3 [Turicibacter sp. HGF1]
 gi|292645942|gb|EFF63971.1| 50S ribosomal protein L3 [Turicibacter sanguinis PC909]
 gi|325489091|gb|EGC91475.1| 50S ribosomal protein L3 [Turicibacter sp. HGF1]
          Length = 209

 Score =  258 bits (660), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT +++ EG+ IPVTV+      V+  +T + +GY AVQVG    + K 
Sbjct: 1   MAKGILGRKIGMTQIFSEEGKLIPVTVVQATPNVVLQVKTNETDGYEAVQVGFETKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP  G  +    +PK+ + EFR   D     VG       F  G++VDVTG T GKGF
Sbjct: 61  ANKPEMGHVAKAETAPKRFIREFR-NLDVAEYQVGQEIKVDTFAEGEIVDVTGKTKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G      RV K KK+ G+ GGN VTV+NLE+V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGSIA-ANRVLKGKKLPGQTGGNIVTVQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R ++L+KG VPGAKK S ++VR + K+
Sbjct: 178 KVDTERNVLLIKGNVPGAKK-SLVMVRSAVKA 208


>gi|302876534|ref|YP_003845167.1| 50S ribosomal protein L3 [Clostridium cellulovorans 743B]
 gi|307687207|ref|ZP_07629653.1| 50S ribosomal protein L3 [Clostridium cellulovorans 743B]
 gi|302579391|gb|ADL53403.1| 50S ribosomal protein L3 [Clostridium cellulovorans 743B]
          Length = 209

 Score =  258 bits (660), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 82/212 (38%), Positives = 125/212 (58%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT +++   + IPVTV+    C V+  +T+DK+GY A+QVG G+ +   
Sbjct: 1   MKKAILGKKIGMTQIFDENRKLIPVTVVEAGPCVVIQKKTIDKDGYEAIQVGFGDKRENL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KPM+G F++  V  K+ + E R+ +D     V   F    F  G+ VDV+G++ GKGF
Sbjct: 61  FNKPMKGHFAAAGVPVKRYVKELRL-EDVSGYNVKDEFKVDIFEAGEKVDVSGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR        +HG S  HR+ GS G   DP R FKNKK+ G MG    TV NL V 
Sbjct: 120 QGTIKRWGAHRGPMSHG-SKFHRAPGSMGASSDPSRTFKNKKLPGHMGAKNTTVMNLTVA 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V   + +IL+KG VPG  K  ++++R++ K+
Sbjct: 179 KVMVDKNIILIKGAVPGPNKG-FVVIRNAVKA 209


>gi|92117098|ref|YP_576827.1| 50S ribosomal protein L3 [Nitrobacter hamburgensis X14]
 gi|123083705|sp|Q1QN30|RL3_NITHX RecName: Full=50S ribosomal protein L3
 gi|91799992|gb|ABE62367.1| LSU ribosomal protein L3P [Nitrobacter hamburgensis X14]
          Length = 241

 Score =  258 bits (660), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 128/215 (59%), Positives = 157/215 (73%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  IPVTVL L NCQV+ HRT +KNGY+A+Q+G+G  K   
Sbjct: 1   MRSGVIAQKVGMTRVFTDAGEHIPVTVLRLSNCQVLGHRTSEKNGYVALQLGSGARKTVY 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + K  RG F+   V PK+K+ EFRV +D  L+PVG+     +F VGQ VDVTG ++GKGF
Sbjct: 61  LPKAERGQFAVAKVEPKRKVAEFRVSED-SLIPVGAEIQADHFVVGQFVDVTGTSVGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +RVT  NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRVTTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D +RGLILV+G VPG+ K  WI VRD+ K  + 
Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWIAVRDAVKKPLP 213


>gi|294630893|ref|ZP_06709453.1| 50S ribosomal protein L3 [Streptomyces sp. e14]
 gi|292834226|gb|EFF92575.1| 50S ribosomal protein L3 [Streptomyces sp. e14]
          Length = 214

 Score =  258 bits (660), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 97/211 (45%), Positives = 128/211 (60%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+
Sbjct: 6   KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G
Sbjct: 66  KPLKGHFAKADVTPRRHLVEIR-TADAAEYTLGQEITAEVFEAGVKVDVTGKSKGKGFAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNFGGL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +V
Sbjct: 125 VMKRHNFGGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+L+KG VPG      +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214


>gi|15674287|ref|NP_268460.1| 50S ribosomal protein L3 [Streptococcus pyogenes M1 GAS]
 gi|42559685|sp|Q9A1X4|RL3_STRP1 RecName: Full=50S ribosomal protein L3
 gi|13621367|gb|AAK33182.1| 50S ribosomal protein L3 [Streptococcus pyogenes M1 GAS]
          Length = 208

 Score =  258 bits (660), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 95/213 (44%), Positives = 133/213 (62%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  S   F  G +VDVTG++ GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFEAGDVVDVTGISKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK++AGRMGGNRVTV+NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +ILVKG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILVKGNVPGAKK-SLITIKSAVKAA 207


>gi|83591276|ref|YP_431285.1| 50S ribosomal protein L3 [Moorella thermoacetica ATCC 39073]
 gi|109893524|sp|Q2RFP7|RL3_MOOTA RecName: Full=50S ribosomal protein L3
 gi|83574190|gb|ABC20742.1| LSU ribosomal protein L3P [Moorella thermoacetica ATCC 39073]
          Length = 209

 Score =  258 bits (660), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 86/213 (40%), Positives = 128/213 (60%), Gaps = 4/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR G++ +K+GMT V++  GR IPVTV+    C V+  +    +GY AVQVG    K + 
Sbjct: 1   MRKGILGKKIGMTQVFDETGRAIPVTVIQAGPCVVIRKKETSTDGYDAVQVGFEPVKERK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP+ G+F+   V+P + + EFR++       VG       F+ G+ VDVTG++ GKGF
Sbjct: 61  VNKPLLGYFNKAGVTPFRYIREFRLEN-SGEYQVGQEIKADVFSPGEKVDVTGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH F      HG S  HR  GS    + P RVFK +++ G +G  RVTV+ LEVV
Sbjct: 120 AGGIKRHGFHRGPMEHG-SKYHRRPGSL-AAKGPARVFKGRRLPGHLGAVRVTVQGLEVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             D +R L+L+KG VPG  ++  +++++S K  
Sbjct: 178 RNDPERNLLLIKGSVPGP-RHGLLVIKNSVKGG 209


>gi|134298093|ref|YP_001111589.1| 50S ribosomal protein L3 [Desulfotomaculum reducens MI-1]
 gi|172044219|sp|A4J111|RL3_DESRM RecName: Full=50S ribosomal protein L3
 gi|134050793|gb|ABO48764.1| LSU ribosomal protein L3P [Desulfotomaculum reducens MI-1]
          Length = 209

 Score =  258 bits (660), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 86/211 (40%), Positives = 122/211 (57%), Gaps = 4/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++N  G  IPVTV+    C VV  RT + +GY A+Q+G G  +   
Sbjct: 1   MPKGILGKKIGMTQIFNEAGVAIPVTVVEAGPCLVVQKRTPENDGYSAIQLGFGVKRENL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G  +   V P + L E +V  D +   VG       F  G+ VDV G + GKGF
Sbjct: 61  LNKPTKGHLNKAGVRPVRFLRELKVD-DLEAFQVGQEIKADIFAEGEKVDVVGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNF      HG S  HR  GS+   + P R FK +K+ G  G  RVTV+NL+VV
Sbjct: 120 AGGIKRHNFHRGPMAHG-SKYHRRPGSS-AAKGPARTFKGRKLPGHYGVERVTVQNLQVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L+ +KG VPG  +   +LV++S K
Sbjct: 178 KVDPERNLLAIKGAVPGP-RGGLLLVKNSVK 207


>gi|75675556|ref|YP_317977.1| 50S ribosomal protein L3 [Nitrobacter winogradskyi Nb-255]
 gi|109893531|sp|Q3SSW6|RL3_NITWN RecName: Full=50S ribosomal protein L3
 gi|74420426|gb|ABA04625.1| LSU ribosomal protein L3P [Nitrobacter winogradskyi Nb-255]
          Length = 247

 Score =  258 bits (660), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 127/219 (57%), Positives = 159/219 (72%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  IPVTVL L NCQV+ HRT +KNGY+A+Q+G+G  K   
Sbjct: 1   MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLSNCQVLGHRTSEKNGYVALQLGSGARKTVY 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + K  RG F+   V+PK+K+ EFRV +D  L+PVG+     +F VGQ VDVTG ++GKG+
Sbjct: 61  MPKAERGQFAVAKVAPKRKVAEFRVSED-SLIPVGAEIQADHFVVGQFVDVTGTSVGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G MG +R+T  NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
             D +RGLILV+G VPG+ K  WI VRD+ K  +  +  
Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWIAVRDAVKKPLPKEAP 217


>gi|225076395|ref|ZP_03719594.1| hypothetical protein NEIFLAOT_01440 [Neisseria flavescens
           NRL30031/H210]
 gi|224952243|gb|EEG33452.1| hypothetical protein NEIFLAOT_01440 [Neisseria flavescens
           NRL30031/H210]
          Length = 214

 Score =  258 bits (660), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 103/212 (48%), Positives = 134/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++    L  G   + S F VGQLVDVTG + GKG
Sbjct: 61  VNKTEAGHFAKAGVEAGRGLVEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPG+  NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGSV-NSDVVVRPSVK 211


>gi|158337810|ref|YP_001518986.1| 50S ribosomal protein L3 [Acaryochloris marina MBIC11017]
 gi|189042827|sp|B0C1D3|RL3_ACAM1 RecName: Full=50S ribosomal protein L3
 gi|158308051|gb|ABW29668.1| 50S ribosomal protein L3 [Acaryochloris marina MBIC11017]
          Length = 212

 Score =  258 bits (660), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 82/209 (39%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT V++  GR IPVTV+    C V   +T   +GY A+Q+G G    K 
Sbjct: 1   MSVGILGTKLGMTQVFDEAGRAIPVTVVQAGPCPVTQIKTAQTDGYTAIQIGYGSTTEKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G       +P + L E+R+  D     +G   S   F+ GQLVD++G +IG+GF
Sbjct: 61  LTRPELGHLKKSGSTPVRHLQEYRL-ADVSEYELGQSISADLFSEGQLVDISGTSIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRHNF      HG S +HR+ GSTG    PGR++  K+MAG+MG  + T++ L VV
Sbjct: 120 AGYQKRHNFRRGPMGHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGQMGNVKKTIRKLTVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            VD +R ++L+KG VPG    + + ++ +
Sbjct: 179 RVDAERNVLLIKGSVPGKP-GALLNIQPA 206


>gi|289641166|ref|ZP_06473334.1| ribosomal protein L3 [Frankia symbiont of Datisca glomerata]
 gi|289509107|gb|EFD30038.1| ribosomal protein L3 [Frankia symbiont of Datisca glomerata]
          Length = 244

 Score =  258 bits (660), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 97/213 (45%), Positives = 125/213 (58%), Gaps = 2/213 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R IPVTV+      V   RT D++GY AVQ+G GE   + V++
Sbjct: 8   GLLGTKLGMTQVWDANNRVIPVTVIKAGPNVVTQVRTSDRDGYSAVQLGYGEIDPRRVTQ 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+RG F+   V P++ L E R     +  P G   +   F+ G +VDVTG + GKGF+G 
Sbjct: 68  PLRGHFARAGVPPRRHLVELRTADATNYRP-GQELTGEIFSAGSIVDVTGTSKGKGFAGV 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GL A HGV   HRS GS G    PGRVFK  +MAGRMG  RVT   L + +VD
Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGHERVTTAGLTIHAVD 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            +RG +LVKG VPG      +LVR + K     
Sbjct: 187 TERGFLLVKGAVPGPD-GGLVLVRSAAKRPAPA 218


>gi|228478031|ref|ZP_04062642.1| 50S ribosomal protein L3 [Streptococcus salivarius SK126]
 gi|312862472|ref|ZP_07722715.1| 50S ribosomal protein L3 [Streptococcus vestibularis F0396]
 gi|322374045|ref|ZP_08048579.1| 50S ribosomal protein L3 [Streptococcus sp. C150]
 gi|322515867|ref|ZP_08068809.1| 50S ribosomal protein L3 [Streptococcus vestibularis ATCC 49124]
 gi|228250211|gb|EEK09464.1| 50S ribosomal protein L3 [Streptococcus salivarius SK126]
 gi|311102115|gb|EFQ60315.1| 50S ribosomal protein L3 [Streptococcus vestibularis F0396]
 gi|321277011|gb|EFX54082.1| 50S ribosomal protein L3 [Streptococcus sp. C150]
 gi|322125654|gb|EFX96981.1| 50S ribosomal protein L3 [Streptococcus vestibularis ATCC 49124]
          Length = 208

 Score =  258 bits (660), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 94/213 (44%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VGS  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSEITVDTFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207


>gi|320009102|gb|ADW03952.1| 50S ribosomal protein L3 [Streptomyces flavogriseus ATCC 33331]
          Length = 214

 Score =  258 bits (660), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 98/211 (46%), Positives = 129/211 (61%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            GV+  KLGMT V++   R +PVTV+    C V   RT D +GY +VQ+  GE   + V+
Sbjct: 6   KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G
Sbjct: 66  KPLKGHFAKADVTPRRHLVELR-TPDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF GL A HGV   HRS GS G    PGRVFK  +MAGRMG  RVT +NL + +V
Sbjct: 125 VMKRHNFKGLGAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+L+KG VPG      +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214


>gi|107024303|ref|YP_622630.1| 50S ribosomal protein L3 [Burkholderia cenocepacia AU 1054]
 gi|116688372|ref|YP_833995.1| 50S ribosomal protein L3 [Burkholderia cenocepacia HI2424]
 gi|123244306|sp|Q1BRU8|RL3_BURCA RecName: Full=50S ribosomal protein L3
 gi|166233123|sp|A0K3M5|RL3_BURCH RecName: Full=50S ribosomal protein L3
 gi|105894492|gb|ABF77657.1| LSU ribosomal protein L3P [Burkholderia cenocepacia AU 1054]
 gi|116646461|gb|ABK07102.1| LSU ribosomal protein L3P [Burkholderia cenocepacia HI2424]
          Length = 217

 Score =  258 bits (660), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 96/212 (45%), Positives = 129/212 (60%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 2   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR+       L  G+V     F VGQ VDV G++IGKG
Sbjct: 62  VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGADLFEVGQKVDVQGVSIGKG 121

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RATHG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 122 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 181

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             +D +R L+LVKG +PGA K   + V  + K
Sbjct: 182 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVK 212


>gi|331091667|ref|ZP_08340501.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330403424|gb|EGG82983.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 226

 Score =  258 bits (659), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 90/228 (39%), Positives = 125/228 (54%), Gaps = 19/228 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58
           M+  ++A K+GMT ++N +G   PVTVL    C V   +T++ +GY AVQVG  + K   
Sbjct: 1   MKKAILATKVGMTQIFNEDGALTPVTVLQAGPCVVTQIKTVENDGYSAVQVGFVDKKDKI 60

Query: 59  --------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
                           V+K  +G F    VS K+ + EF+ +  D+   +        F 
Sbjct: 61  VNVDKNGKKEIVHRHGVTKAEKGHFDKAGVSGKRFVREFKFENADE-YTLAQEIKADIFA 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  VD T ++ GKGF GA+KRHN      THG S  HR  GS G   DP +VFK KKM 
Sbjct: 120 AGDKVDATAISKGKGFQGAIKRHNQHRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           G MG  ++T++NLE+V VD +  LILVKG VPG KK S + +++S K+
Sbjct: 179 GHMGSKKITIQNLEIVRVDAENNLILVKGSVPGPKK-SLVTIKESVKA 225


>gi|325282640|ref|YP_004255181.1| 50S ribosomal protein L3 [Deinococcus proteolyticus MRP]
 gi|324314449|gb|ADY25564.1| 50S ribosomal protein L3 [Deinococcus proteolyticus MRP]
          Length = 206

 Score =  258 bits (659), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 95/211 (45%), Positives = 124/211 (58%), Gaps = 7/211 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  K+GMT ++  + R +PVTV+    C VV  +T + +GY AVQ+G G+ K K ++
Sbjct: 2   KGILGTKIGMTQIW-KDDRAVPVTVILAGPCPVVQRKTNEVDGYEAVQIGFGDRKEKGLN 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G     ++SP + L EFR     D  P G       F  G+ +DVTG + GKGF G
Sbjct: 61  KPQLGHLKKADISPVRYLREFR-----DFSPEGDEVRVDVFGEGEKIDVTGTSKGKGFQG 115

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKR NF G  A+HG    HR  GS G R+ PGRV+K KKMAG MG  RVTV+NLEVV V
Sbjct: 116 VMKRWNFAGGPASHGAKKWHRRPGSIGQRKTPGRVYKGKKMAGHMGDERVTVQNLEVVEV 175

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
                LILVKG VPGA     +++R + K  
Sbjct: 176 RPDENLILVKGAVPGAN-GGLVILRGAVKGG 205


>gi|197303812|ref|ZP_03168848.1| hypothetical protein RUMLAC_02551 [Ruminococcus lactaris ATCC
           29176]
 gi|197297105|gb|EDY31669.1| hypothetical protein RUMLAC_02551 [Ruminococcus lactaris ATCC
           29176]
          Length = 242

 Score =  258 bits (659), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 88/229 (38%), Positives = 125/229 (54%), Gaps = 20/229 (8%)

Query: 1   MRSGVVARKLGMTCVYNI-EGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV- 58
           M+  ++A K+GMT ++N  +G  IPVTVL    C V   +T++ +GY AVQVG  + K  
Sbjct: 16  MKKAILATKVGMTQIFNEEDGVLIPVTVLQAGPCVVTQVKTVENDGYSAVQVGYVDKKEK 75

Query: 59  ---------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
                            V+K  +G F    VS K+ + EFR +  ++   +        F
Sbjct: 76  IVTKDNSGKKSIAHRNGVTKAEKGHFDKAGVSGKRYVKEFRFENAEE-YTLAQEIKADIF 134

Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
             G  +D T ++ GKGF GA+KRH       THG S  HR  GS G   DP +VFK KKM
Sbjct: 135 AAGDKIDATAISKGKGFQGAIKRHGQSRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKM 193

Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            G+MG  ++TV+NLEVV VD +  L+LVKG VPG KK   + ++++ K+
Sbjct: 194 PGQMGNKKITVQNLEVVRVDAENNLLLVKGSVPGPKK-CLVTIKETVKA 241


>gi|308178136|ref|YP_003917542.1| 50S ribosomal protein L3 [Arthrobacter arilaitensis Re117]
 gi|307745599|emb|CBT76571.1| 50S ribosomal protein L3 [Arthrobacter arilaitensis Re117]
          Length = 216

 Score =  258 bits (659), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 92/211 (43%), Positives = 129/211 (61%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++     IPVTV+  D+  V      +++GY AVQ+G G+   + V+
Sbjct: 8   KGLLGTKLGMTQVWDSNNNLIPVTVVQADSNVVTKLINEERDGYTAVQIGYGQIDPRKVT 67

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F +  V+P++ L E R   D      G   S   F  GQ VDV G + GKGF+G
Sbjct: 68  KPLAGHFEAAGVTPRRHLVELR-TADAAEYTAGQELSVEVFEAGQKVDVVGTSKGKGFAG 126

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF G+ A+HG   +HR  GS G    PGRVF+ +KMAGRMG  RVT +NL + ++
Sbjct: 127 VMKRHNFHGVGASHGAHKNHRKPGSIGGASTPGRVFRGQKMAGRMGAERVTTQNLTIHAI 186

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++ L+L+KG VPGA +   +LVR++ K A
Sbjct: 187 DAEKNLLLIKGAVPGA-RGRVVLVRNAVKGA 216


>gi|227832219|ref|YP_002833926.1| 50S ribosomal protein L3 [Corynebacterium aurimucosum ATCC 700975]
 gi|262183926|ref|ZP_06043347.1| 50S ribosomal protein L3 [Corynebacterium aurimucosum ATCC 700975]
 gi|254803667|sp|C3PKQ2|RL3_CORA7 RecName: Full=50S ribosomal protein L3
 gi|227453235|gb|ACP31988.1| 50S ribosomal protein L3 [Corynebacterium aurimucosum ATCC 700975]
          Length = 218

 Score =  258 bits (659), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 87/214 (40%), Positives = 122/214 (57%), Gaps = 2/214 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++ E R +PVTV+    C V   RT + +GY A+Q+  GE   + V+
Sbjct: 7   KGILGTKLGMTQVFDEENRVVPVTVVEAGPCVVTQIRTKETDGYNAIQIAFGEKDPRKVN 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P++ + E R+  D     VG       F     VDVTG T G G++G
Sbjct: 67  KPATGHFKKAGVTPRRYVAEIRMD-DTSAYEVGQEVKVDIFEGVSFVDVTGTTKGHGYAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRH F G  A HG   +HR  G  G    PGRVFK K+MAGRMG +RVT +NL++  +
Sbjct: 126 AMKRHGFAGQGAAHGNQAAHRRVGGIGGASFPGRVFKGKRMAGRMGQDRVTTQNLKIQKI 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           D +  L+L+KG +PGA +   + V+ + K   + 
Sbjct: 186 DAESNLLLIKGAIPGA-RGGLVTVKTAVKGGAHA 218


>gi|292669860|ref|ZP_06603286.1| 50S ribosomal protein L3 [Selenomonas noxia ATCC 43541]
 gi|292648657|gb|EFF66629.1| 50S ribosomal protein L3 [Selenomonas noxia ATCC 43541]
          Length = 220

 Score =  258 bits (659), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 98/219 (44%), Positives = 131/219 (59%), Gaps = 5/219 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +   ++ RKLGMT ++  EGR +PVTV+   N  V+ ++T + +GY AVQ+G GE K KN
Sbjct: 4   LAKAILGRKLGMTQIFTEEGRVVPVTVVESGNNFVLQNKTDETDGYNAVQIGFGEVKEKN 63

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F    V   + + E R+    +   VG       F  G LVDV G + GKGF
Sbjct: 64  VNKPLKGHFEKAGVKAVRFIREMRLSAPSE-YNVGDTIGVDIFAAGDLVDVVGTSKGKGF 122

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KRHNF      HG S SHR  GSTG       GRV K KK+ GRMGG RVTV+ L 
Sbjct: 123 AGGIKRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLT 181

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           VV VD  R LIL+KG +PG KK  +++++D+ K A   K
Sbjct: 182 VVRVDADRNLILIKGAIPGPKKG-FVVIKDTVKPAKAAK 219


>gi|297582450|ref|YP_003698230.1| 50S ribosomal protein L3 [Bacillus selenitireducens MLS10]
 gi|297140907|gb|ADH97664.1| 50S ribosomal protein L3 [Bacillus selenitireducens MLS10]
          Length = 208

 Score =  258 bits (659), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 82/212 (38%), Positives = 119/212 (56%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT +++  G ++PVTV+      V+  +T +  GY A+Q+G  + K   
Sbjct: 1   MTKGILGKKLGMTQIFSENGEQVPVTVIEASPNVVLQKKTAEGEGYEAIQIGYDDKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            + P +G       +PK+ + E R     D   +G       F  G  +DVTG + GKGF
Sbjct: 61  QNSPEKGHAEKAKTAPKRFVKEIRDVNTAD-YEIGQEIKVDIFAEGDAIDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRHN      +HG S  HR  GS G   DP  V   K + G+MGG  VT++NLEVV
Sbjct: 120 QGAIKRHNQSRGPMSHG-SRYHRRPGSMGPV-DPNHVRPGKLLPGQMGGETVTIQNLEVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R +ILVKG VPGA+K S++ +  + K+
Sbjct: 178 KVDTERNVILVKGNVPGARK-SFVTITSATKA 208


>gi|254246597|ref|ZP_04939918.1| Ribosomal protein L3 [Burkholderia cenocepacia PC184]
 gi|124871373|gb|EAY63089.1| Ribosomal protein L3 [Burkholderia cenocepacia PC184]
          Length = 220

 Score =  258 bits (659), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 96/212 (45%), Positives = 129/212 (60%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 5   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 64

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR+       L  G+V     F VGQ VDV G++IGKG
Sbjct: 65  VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGADLFEVGQKVDVQGVSIGKG 124

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RATHG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 125 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 184

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             +D +R L+LVKG +PGA K   + V  + K
Sbjct: 185 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVK 215


>gi|170731682|ref|YP_001763629.1| 50S ribosomal protein L3 [Burkholderia cenocepacia MC0-3]
 gi|206558641|ref|YP_002229401.1| 50S ribosomal protein L3 [Burkholderia cenocepacia J2315]
 gi|212288250|sp|B1JU22|RL3_BURCC RecName: Full=50S ribosomal protein L3
 gi|212288251|sp|B4E5C0|RL3_BURCJ RecName: Full=50S ribosomal protein L3
 gi|169814924|gb|ACA89507.1| ribosomal protein L3 [Burkholderia cenocepacia MC0-3]
 gi|198034678|emb|CAR50545.1| 50S ribosomal protein L3 [Burkholderia cenocepacia J2315]
          Length = 216

 Score =  258 bits (659), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 96/212 (45%), Positives = 129/212 (60%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR+       L  G+V     F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGADLFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RATHG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 121 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             +D +R L+LVKG +PGA K   + V  + K
Sbjct: 181 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVK 211


>gi|77165787|ref|YP_344312.1| ribosomal protein L3 [Nitrosococcus oceani ATCC 19707]
 gi|254434228|ref|ZP_05047736.1| ribosomal protein L3 [Nitrosococcus oceani AFC27]
 gi|109893530|sp|Q3J8R4|RL3_NITOC RecName: Full=50S ribosomal protein L3
 gi|76884101|gb|ABA58782.1| LSU ribosomal protein L3P [Nitrosococcus oceani ATCC 19707]
 gi|207090561|gb|EDZ67832.1| ribosomal protein L3 [Nitrosococcus oceani AFC27]
          Length = 215

 Score =  258 bits (659), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 97/216 (44%), Positives = 140/216 (64%), Gaps = 2/216 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  EG  IPVTV+     ++   +TL+++GY AVQV  GE +   
Sbjct: 1   MAIGLIGRKVGMTRVFTDEGASIPVTVIEATPNRISQVKTLEQDGYQAVQVTVGERRPAR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDD-LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+  ++G F+  NV P +KL EFR   ++   +          F VGQ VDVTG+T G+G
Sbjct: 61  VTSSLKGHFAKANVEPGRKLQEFRFGAEEGRDIKASGELKVDLFEVGQKVDVTGITRGRG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G ++R++FGG  A+HG S+SHR+ GS G  Q PGRVFK KKMAG+MG  R TV+NLE+
Sbjct: 121 FAGVVRRYHFGGGDASHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGQMGNVRRTVQNLEL 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           V +D+ R L+L+KG +PGA     ++V+ + K+ V 
Sbjct: 181 VRIDEGRQLLLIKGAIPGAPGGD-VIVKPAVKTVVK 215


>gi|302877801|ref|YP_003846365.1| 50S ribosomal protein L3 [Gallionella capsiferriformans ES-2]
 gi|302580590|gb|ADL54601.1| 50S ribosomal protein L3 [Gallionella capsiferriformans ES-2]
          Length = 214

 Score =  258 bits (659), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 100/215 (46%), Positives = 131/215 (60%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V+  +G  +PVTVL + N +V   +++  +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKIGMTRVFTEDGSSLPVTVLEVSNNRVTQVKSVAVDGYTAVQVAHGVRRATR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           VSK   G ++   V     L EF V  +  D L +GS  S   F VGQLVDVTG T GKG
Sbjct: 61  VSKAAAGHYAKAGVEAGSALKEFIVTPEQLDGLALGSSISVEIFQVGQLVDVTGTTKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KRH+F   RA+HG S SH   GS G  QDPGRVF  K+M G +G  + TV+NL++
Sbjct: 121 YAGTIKRHHFKSGRASHGNSKSHNVPGSIGMAQDPGRVFPGKRMTGHLGDEQRTVQNLQI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           V VD  R L+LVKG VPG   NS I+VR + K+  
Sbjct: 181 VRVDVARQLLLVKGAVPGC-TNSKIIVRPAVKAGA 214


>gi|160895840|ref|YP_001561422.1| 50S ribosomal protein L3 [Delftia acidovorans SPH-1]
 gi|226725161|sp|A9BPR8|RL3_DELAS RecName: Full=50S ribosomal protein L3
 gi|160361424|gb|ABX33037.1| ribosomal protein L3 [Delftia acidovorans SPH-1]
          Length = 224

 Score =  258 bits (659), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 91/214 (42%), Positives = 130/214 (60%), Gaps = 3/214 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  +PVTV+ + N +V   +T + +GY+A+QV  G  K   V+K
Sbjct: 8   GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVALQVTFGSRKASRVTK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121
           P  G  +   V   + + EFRV ++       GSV      F+VGQ VDV G +IGKGF+
Sbjct: 68  PEAGHLAKAGVEAGEVMGEFRVTEETAGKYAAGSVLPVAELFSVGQKVDVQGTSIGKGFA 127

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNF   RA+HG S SH   GS    QDPGRVF  KKM G MG   +T +NL+VV 
Sbjct: 128 GTIKRHNFRSQRASHGNSRSHNVPGSISMAQDPGRVFPGKKMTGHMGDETITTQNLDVVR 187

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           +D+ R L+L+KG VPG+ K  ++ VR + K+  +
Sbjct: 188 IDEARQLLLIKGAVPGS-KGGFVTVRPAIKAKAS 220


>gi|315655881|ref|ZP_07908779.1| 50S ribosomal protein L3 [Mobiluncus curtisii ATCC 51333]
 gi|315656193|ref|ZP_07909084.1| 50S ribosomal protein L3 [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315489945|gb|EFU79572.1| 50S ribosomal protein L3 [Mobiluncus curtisii ATCC 51333]
 gi|315493195|gb|EFU82795.1| 50S ribosomal protein L3 [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 218

 Score =  258 bits (659), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 93/211 (44%), Positives = 130/211 (61%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
             ++ RKLGMT V++ +G+ IPVTV+ ++   V   RT + +GY AVQ+G G+   + V+
Sbjct: 10  KALLGRKLGMTQVWDEDGKLIPVTVVQVEKNVVTQIRTNETDGYDAVQLGFGKMDERKVT 69

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KPM G F+   V P++ L E R   D     +G       F  G LVDV+G T GKGF+G
Sbjct: 70  KPMAGHFAKAGVEPRRHLAEIR-TGDASSYELGQELGAEVFEAGTLVDVSGNTKGKGFAG 128

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    PGRVFK   MAGRMGGNR T+ NL+V +V
Sbjct: 129 VMKRHGFQGVSASHGAHRNHRKPGSIGACATPGRVFKGLNMAGRMGGNRRTIMNLKVQAV 188

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+++ G +PG  K   +++R + K A
Sbjct: 189 DAEKGLVVLTGAIPGP-KGGIVMIRSAVKGA 218


>gi|154706152|ref|YP_001425182.1| 50S ribosomal protein L3 [Coxiella burnetii Dugway 5J108-111]
 gi|189042840|sp|A9KD31|RL3_COXBN RecName: Full=50S ribosomal protein L3
 gi|154355438|gb|ABS76900.1| LSU ribosomal protein L3P [Coxiella burnetii Dugway 5J108-111]
          Length = 217

 Score =  258 bits (659), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 1/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK GMT ++   G  IPVTV+ +   ++   +T++ +GY A QV  G+     
Sbjct: 1   MSIGLIGRKCGMTRIFTETGSSIPVTVVEVIPNRITQVKTVETDGYRAFQVAYGKKSSAR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G +S   V     L EFR+  ++      G       F  GQ+VDV G+T GKG
Sbjct: 61  VNKPLAGHYSKAAVEAGNALREFRLGNEELTEAKAGDELKVDIFKEGQVVDVRGLTRGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +K HNF    ATHG S+SHR+ GS G  Q PGRV+K KKMAG++G    TV++ E+
Sbjct: 121 FAGTVKHHNFRTQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGQLGNVYCTVQSQEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           + VD +R L+L+KG +PGA     I+ + S K 
Sbjct: 181 IKVDVERNLLLIKGALPGAPGGEVIITQSSKKR 213


>gi|261409521|ref|YP_003245762.1| 50S ribosomal protein L3 [Paenibacillus sp. Y412MC10]
 gi|329922035|ref|ZP_08277828.1| 50S ribosomal protein L3 [Paenibacillus sp. HGF5]
 gi|261285984|gb|ACX67955.1| 50S ribosomal protein L3 [Paenibacillus sp. Y412MC10]
 gi|328942418|gb|EGG38682.1| 50S ribosomal protein L3 [Paenibacillus sp. HGF5]
          Length = 207

 Score =  258 bits (659), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 85/210 (40%), Positives = 118/210 (56%), Gaps = 4/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RKLGMT V+  EG  IPVTV+    C V+  + L+ +GY A+QVG  + K    +
Sbjct: 2   KGILGRKLGMTQVFTPEGVVIPVTVIEAGPCVVLQKKDLENDGYEAIQVGFSDKKENRSN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G     N +PK+ + E R   D   + VG       F  G+ VDVTG++ GKGF G
Sbjct: 62  KPEAGHAKKANTAPKRYVREIRGV-DLASVEVGQELKADVFAEGEFVDVTGISKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR        +HG S  HR  GS G  Q   RV K K++ G MG   VT++ LEVV V
Sbjct: 121 VIKRWGQSRGPMSHG-SRYHRRPGSMGSIQ-ANRVPKGKRLPGHMGNETVTIQKLEVVKV 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R +ILVKG +PG KK  ++ ++++ K 
Sbjct: 179 DAERNVILVKGSIPGPKKG-FVQIKETVKK 207


>gi|282860810|ref|ZP_06269876.1| ribosomal protein L3 [Streptomyces sp. ACTE]
 gi|282564546|gb|EFB70082.1| ribosomal protein L3 [Streptomyces sp. ACTE]
          Length = 214

 Score =  258 bits (659), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 98/211 (46%), Positives = 129/211 (61%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            GV+  KLGMT V++   R +PVTV+    C V   RT D +GY +VQ+  GE   + V+
Sbjct: 6   KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G
Sbjct: 66  KPLKGHFAKADVTPRRHLVELR-TPDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF GL A HGV   HRS GS G    PGRVFK  +MAGRMG  RVT +NL + +V
Sbjct: 125 VMKRHNFKGLGAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+L+KG VPG      +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214


>gi|319787925|ref|YP_004147400.1| 50S ribosomal protein L3 [Pseudoxanthomonas suwonensis 11-1]
 gi|317466437|gb|ADV28169.1| 50S ribosomal protein L3 [Pseudoxanthomonas suwonensis 11-1]
          Length = 216

 Score =  258 bits (659), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 97/210 (46%), Positives = 131/210 (62%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK GM+ V+  +GR IPVT++     ++   +T++ +GY AVQV  G  +   V+K
Sbjct: 8   GLVGRKAGMSRVFTEDGRSIPVTLIEATPNRITQIKTVEADGYSAVQVTTGARRASLVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P+ G ++   V   + L+EFRV  +      VG       F VGQ+VDV G+T GKGF G
Sbjct: 68  PLAGHYAKAKVEAGRGLWEFRVADEKIGDFAVGGEIKADIFEVGQIVDVQGVTKGKGFQG 127

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHNF    ATHG S+SHR+ GS G RQ PGRVF  KKMAG MG  + + +NLEVV V
Sbjct: 128 TIKRHNFTMGDATHGNSLSHRAPGSIGQRQTPGRVFPGKKMAGHMGAEQQSTQNLEVVRV 187

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +RGLI V+G VPGA     ++VR + K+
Sbjct: 188 DAERGLIAVRGAVPGAPGGD-VIVRPASKA 216


>gi|309789667|ref|ZP_07684248.1| ribosomal protein L3 [Oscillochloris trichoides DG6]
 gi|308228403|gb|EFO82050.1| ribosomal protein L3 [Oscillochloris trichoides DG6]
          Length = 209

 Score =  258 bits (659), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 93/212 (43%), Positives = 132/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M SG++ RKLGM  V++ +G  IPVTV+    C V   RT++++GY AVQ+G  + + + 
Sbjct: 1   MISGMLGRKLGMMQVFSDKGEVIPVTVIAAGPCIVTQVRTVERDGYAAVQIGYEQVEPRK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G   + N    + L EF      +  P G V +   F  GQ +DV+G + G+GF
Sbjct: 61  LTKPQQGHLKAANAML-RYLREFPADNPQEHTP-GEVINVELFKPGQKIDVSGTSKGRGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH F G   THG S  HR+ GS G    PGRV+K +KMAGRMGG RVT++NLEVV
Sbjct: 119 AGVVKRHGFRGGPKTHGQSDRHRAPGSIGAGTTPGRVWKGQKMAGRMGGKRVTIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ LILVKG VPGA+    + +R + K+
Sbjct: 179 EVLPEKNLILVKGSVPGARTG-LLEIRRAVKA 209


>gi|290958151|ref|YP_003489333.1| 50S ribosomal protein L3 [Streptomyces scabiei 87.22]
 gi|260647677|emb|CBG70782.1| 50S ribosomal protein L3 [Streptomyces scabiei 87.22]
          Length = 214

 Score =  258 bits (659), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 97/211 (45%), Positives = 127/211 (60%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+
Sbjct: 6   KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F+  +V+P++ L E R   D     +G   S   F  G  VDVTG + GKGF+G
Sbjct: 66  KPLKGHFAKADVTPRRHLVEIR-TADASEYTLGQEISAEVFEAGVKVDVTGKSKGKGFAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +V
Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+L+KG VPG      +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214


>gi|256825886|ref|YP_003149846.1| 50S ribosomal protein L3P [Kytococcus sedentarius DSM 20547]
 gi|256689279|gb|ACV07081.1| LSU ribosomal protein L3P [Kytococcus sedentarius DSM 20547]
          Length = 219

 Score =  258 bits (659), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 94/210 (44%), Positives = 127/210 (60%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+  KLGMT V++ + R +PVTV+ +    V   RT D +GY AVQ+  G+   + VS 
Sbjct: 12  GVLGTKLGMTQVWDEDNRLVPVTVVQVAPNVVTQIRTQDTDGYGAVQIATGDIDPRKVSN 71

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+RG F    V+P++ + E R   D     +G   +   F  G  VDVTG T GKGF+G 
Sbjct: 72  PLRGHFEKAGVTPRRHVTELR-TADSGSYELGQELTVETFENGATVDVTGTTKGKGFAGV 130

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G+ A+HG   +HR  GS G    PGRVF+  +MAGRMGG R T +NL + +VD
Sbjct: 131 MKRHGFAGVSASHGAHRNHRKPGSIGGCATPGRVFRGTRMAGRMGGERQTTQNLTIHAVD 190

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             +GL+L+KG VPGA +   +LVR + K A
Sbjct: 191 ADKGLLLIKGAVPGA-RGGLVLVRSAAKGA 219


>gi|323357372|ref|YP_004223768.1| ribosomal protein L3 [Microbacterium testaceum StLB037]
 gi|323273743|dbj|BAJ73888.1| ribosomal protein L3 [Microbacterium testaceum StLB037]
          Length = 219

 Score =  258 bits (659), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 96/214 (44%), Positives = 133/214 (62%), Gaps = 3/214 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +  G++  KLGMT V++  G+ +PVTV+ +    V   R+L+K+GY AVQ+G G+   + 
Sbjct: 8   ISKGLLGTKLGMTQVWDENGKLVPVTVIEVAPNVVTQLRSLEKDGYNAVQIGYGQIDPRK 67

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119
           V+KP+   F +  V+P++ L E R   D     +G   +    F  GQLVDV G + GKG
Sbjct: 68  VNKPLTAHFDAAGVTPRRHLTEVR-TADAADYTLGQELTVDGLFEAGQLVDVVGTSKGKG 126

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            +G MKRHNF G+ A+HG   +HR  GS G    P RVFK  +MAGRMGG RVTV NL V
Sbjct: 127 TAGVMKRHNFKGVSASHGAHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGERVTVLNLTV 186

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +VD ++GL+LVKG VPGA +   + VR++ K A
Sbjct: 187 HAVDAEKGLMLVKGAVPGA-RGRIVYVRNAVKGA 219


>gi|85858146|ref|YP_460348.1| 50S ribosomal protein L3P [Syntrophus aciditrophicus SB]
 gi|109893562|sp|Q2LQA1|RL3_SYNAS RecName: Full=50S ribosomal protein L3
 gi|85721237|gb|ABC76180.1| LSU ribosomal protein L3P [Syntrophus aciditrophicus SB]
          Length = 218

 Score =  258 bits (659), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 83/212 (39%), Positives = 132/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ RK+GMT V+  +G  IPVT + ++   +   +T++K+GY A+Q+G G  K   
Sbjct: 10  MKKMIIGRKIGMTQVFAEDGAAIPVTAIEVEPSVITQKKTVEKDGYDAIQLGYGRIKQNK 69

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP++G F+  +    + L E R  +  +   +G   +   F  G++VD+TG T GKGF
Sbjct: 70  ATKPLQGHFAKADKGCFRILKEMRCDQIQE-YELGQEITLDIFESGEMVDITGTTKGKGF 128

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH F G R++HG S+ HR+ GS G    P RVFK KK+ G+MG  + TVKNL + 
Sbjct: 129 AGVIKRHGFRGGRSSHG-SMFHRAPGSIGASAYPSRVFKGKKLPGQMGNKQKTVKNLMIW 187

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           S+  +R LIL++G VPGA +N ++ ++ S K+
Sbjct: 188 SLRPERNLILIRGAVPGA-RNGYLFIKQSAKA 218


>gi|298345472|ref|YP_003718159.1| 50S ribosomal protein L3 [Mobiluncus curtisii ATCC 43063]
 gi|304391028|ref|ZP_07372980.1| 50S ribosomal protein L3 [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|298235533|gb|ADI66665.1| 50S ribosomal protein L3 [Mobiluncus curtisii ATCC 43063]
 gi|304325911|gb|EFL93157.1| 50S ribosomal protein L3 [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 217

 Score =  258 bits (659), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 93/211 (44%), Positives = 130/211 (61%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
             ++ RKLGMT V++ +G+ IPVTV+ ++   V   RT + +GY AVQ+G G+   + V+
Sbjct: 9   KALLGRKLGMTQVWDEDGKLIPVTVVQVEKNVVTQIRTNETDGYDAVQLGFGKMDERKVT 68

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KPM G F+   V P++ L E R   D     +G       F  G LVDV+G T GKGF+G
Sbjct: 69  KPMAGHFAKAGVEPRRHLAEIR-TGDASSYELGQELGAEVFEAGTLVDVSGNTKGKGFAG 127

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    PGRVFK   MAGRMGGNR T+ NL+V +V
Sbjct: 128 VMKRHGFQGVSASHGAHRNHRKPGSIGACATPGRVFKGLNMAGRMGGNRRTIMNLKVQAV 187

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+++ G +PG  K   +++R + K A
Sbjct: 188 DAEKGLVVLTGAIPGP-KGGIVMIRSAVKGA 217


>gi|16804670|ref|NP_466155.1| 50S ribosomal protein L3 [Listeria monocytogenes EGD-e]
 gi|46908804|ref|YP_015193.1| 50S ribosomal protein L3 [Listeria monocytogenes str. 4b F2365]
 gi|47094372|ref|ZP_00232066.1| ribosomal protein L3 [Listeria monocytogenes str. 4b H7858]
 gi|217966169|ref|YP_002351847.1| ribosomal protein L3 [Listeria monocytogenes HCC23]
 gi|224499305|ref|ZP_03667654.1| 50S ribosomal protein L3 [Listeria monocytogenes Finland 1988]
 gi|224503574|ref|ZP_03671881.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL R2-561]
 gi|226225177|ref|YP_002759284.1| ribosomal protein L3 [Listeria monocytogenes Clip81459]
 gi|254825007|ref|ZP_05230008.1| ribosomal protein L3 [Listeria monocytogenes FSL J1-194]
 gi|254829081|ref|ZP_05233768.1| ribosomal protein L3 [Listeria monocytogenes FSL N3-165]
 gi|254830936|ref|ZP_05235591.1| 50S ribosomal protein L3 [Listeria monocytogenes 10403S]
 gi|254854162|ref|ZP_05243510.1| ribosomal protein L3 [Listeria monocytogenes FSL R2-503]
 gi|254899917|ref|ZP_05259841.1| 50S ribosomal protein L3 [Listeria monocytogenes J0161]
 gi|254912877|ref|ZP_05262889.1| 50S ribosomal protein L3 [Listeria monocytogenes J2818]
 gi|254931098|ref|ZP_05264457.1| ribosomal protein L3 [Listeria monocytogenes HPB2262]
 gi|254937257|ref|ZP_05268954.1| ribosomal protein L3 [Listeria monocytogenes F6900]
 gi|254991854|ref|ZP_05274044.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL J2-064]
 gi|255027144|ref|ZP_05299130.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL J2-003]
 gi|255029693|ref|ZP_05301644.1| 50S ribosomal protein L3 [Listeria monocytogenes LO28]
 gi|255519640|ref|ZP_05386877.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL J1-175]
 gi|284800482|ref|YP_003412347.1| 50S ribosomal protein L3 [Listeria monocytogenes 08-5578]
 gi|284993668|ref|YP_003415436.1| 50S ribosomal protein L3 [Listeria monocytogenes 08-5923]
 gi|290891817|ref|ZP_06554814.1| ribosomal protein L3 [Listeria monocytogenes FSL J2-071]
 gi|300763617|ref|ZP_07073615.1| ribosomal protein L3 [Listeria monocytogenes FSL N1-017]
 gi|42559668|sp|Q8Y440|RL3_LISMO RecName: Full=50S ribosomal protein L3
 gi|67461150|sp|Q71WE6|RL3_LISMF RecName: Full=50S ribosomal protein L3
 gi|254803678|sp|B8DB08|RL3_LISMH RecName: Full=50S ribosomal protein L3
 gi|259709728|sp|C1KZI0|RL3_LISMC RecName: Full=50S ribosomal protein L3
 gi|16412120|emb|CAD00710.1| ribosomal protein L3 [Listeria monocytogenes EGD-e]
 gi|46882077|gb|AAT05370.1| ribosomal protein L3 [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47017254|gb|EAL08093.1| ribosomal protein L3 [Listeria monocytogenes str. 4b H7858]
 gi|217335439|gb|ACK41233.1| ribosomal protein L3 [Listeria monocytogenes HCC23]
 gi|225877639|emb|CAS06353.1| ribosomal protein L3 [Listeria monocytogenes serotype 4b str. CLIP
           80459]
 gi|258601491|gb|EEW14816.1| ribosomal protein L3 [Listeria monocytogenes FSL N3-165]
 gi|258607554|gb|EEW20162.1| ribosomal protein L3 [Listeria monocytogenes FSL R2-503]
 gi|258609863|gb|EEW22471.1| ribosomal protein L3 [Listeria monocytogenes F6900]
 gi|284056044|gb|ADB66985.1| 50S ribosomal protein L3 [Listeria monocytogenes 08-5578]
 gi|284059135|gb|ADB70074.1| 50S ribosomal protein L3 [Listeria monocytogenes 08-5923]
 gi|290558411|gb|EFD91928.1| ribosomal protein L3 [Listeria monocytogenes FSL J2-071]
 gi|293582645|gb|EFF94677.1| ribosomal protein L3 [Listeria monocytogenes HPB2262]
 gi|293590876|gb|EFF99210.1| 50S ribosomal protein L3 [Listeria monocytogenes J2818]
 gi|293594248|gb|EFG02009.1| ribosomal protein L3 [Listeria monocytogenes FSL J1-194]
 gi|300515894|gb|EFK42943.1| ribosomal protein L3 [Listeria monocytogenes FSL N1-017]
 gi|307572221|emb|CAR85400.1| rplC [Listeria monocytogenes L99]
 gi|328468116|gb|EGF39122.1| 50S ribosomal protein L3 [Listeria monocytogenes 1816]
 gi|328469805|gb|EGF40722.1| 50S ribosomal protein L3 [Listeria monocytogenes 220]
          Length = 209

 Score =  258 bits (659), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 84/212 (39%), Positives = 127/212 (59%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGRKVGMTQVFTENGELIPVTVIEAAQNVVLQKKTVETDGYEAVQIGFEDKRAIL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EFR   + D   +G+      F  G ++D TG++ GKGF
Sbjct: 61  SNKPEQGHVAKANTTPKRFIREFR-DVNLDEYEIGAEVKVDVFAEGDIIDATGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK + GRMGG ++T++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQITIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD ++ ++LVKG VPGAKK + + ++ + K+
Sbjct: 178 KVDVEKNVLLVKGNVPGAKK-ALVQIKTATKA 208


>gi|254391393|ref|ZP_05006596.1| 50S ribosomal protein L3 [Streptomyces clavuligerus ATCC 27064]
 gi|294814467|ref|ZP_06773110.1| 50S ribosomal protein L3 [Streptomyces clavuligerus ATCC 27064]
 gi|326442856|ref|ZP_08217590.1| 50S ribosomal protein L3 [Streptomyces clavuligerus ATCC 27064]
 gi|197705083|gb|EDY50895.1| 50S ribosomal protein L3 [Streptomyces clavuligerus ATCC 27064]
 gi|294327066|gb|EFG08709.1| 50S ribosomal protein L3 [Streptomyces clavuligerus ATCC 27064]
          Length = 214

 Score =  258 bits (659), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 98/211 (46%), Positives = 129/211 (61%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            GV+  KLGMT V++   R +PVTV+    C V   RT D +GY +VQ+  GE   + V+
Sbjct: 6   KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDVDGYESVQIAFGEIDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F+  +V+P++ L E R   D     +G   + + F  G  VDVTG + GKGF+G
Sbjct: 66  KPLKGHFAKADVTPRRHLVELRTS-DASEYTLGQEITAAVFESGVKVDVTGKSKGKGFAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +V
Sbjct: 125 VMKRHNFRGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+L+KG VPG      +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214


>gi|94676516|ref|YP_588776.1| ribosomal protein L3 [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|123260557|sp|Q1LTD8|RL3_BAUCH RecName: Full=50S ribosomal protein L3
 gi|94219666|gb|ABF13825.1| ribosomal protein L3 [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 212

 Score =  258 bits (659), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 84/209 (40%), Positives = 131/209 (62%), Gaps = 1/209 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT ++  EG  IP+T++ ++   +   +++  +GY A QV  G  K   V 
Sbjct: 2   KGLIGRKIGMTRIFTDEGISIPITIIQVEPNIITQVKSIQTDGYYAYQVTTGTKKPNLVI 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+       + L+EFR++ ++  + +G + +  YFT  + VD+TG + GKGFSG
Sbjct: 62  KPEAGHFAKAGTKAGRSLWEFRLKHEEKPINIGEILTLEYFTNIKKVDITGTSKGKGFSG 121

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    A+HG S+SHR  GS G  Q PG+VFK KKMAG MG  RVT++NL+++ +
Sbjct: 122 TVKRWNFHMQDASHGNSLSHRVTGSIGQNQTPGKVFKGKKMAGHMGNKRVTIQNLDIIRI 181

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D ++ L+L+KG +PGA  N  I ++ + K
Sbjct: 182 DLRKNLLLIKGAIPGAPGNDLI-IKPAIK 209


>gi|167838212|ref|ZP_02465071.1| 50S ribosomal protein L3 [Burkholderia thailandensis MSMB43]
          Length = 219

 Score =  258 bits (659), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 99/212 (46%), Positives = 131/212 (61%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR+  D    L  G+V  P  F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVQAGEILKEFRIAADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NFG  RA+HG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             +D  R L+LVKG VPGA K   + V  + K
Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211


>gi|332107866|gb|EGJ09090.1| 50S ribosomal protein L3 [Rubrivivax benzoatilyticus JA2]
          Length = 223

 Score =  257 bits (658), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 97/217 (44%), Positives = 130/217 (59%), Gaps = 2/217 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  IPVTVL + N +V   +T+  +GY A+QV  G  K   V+K
Sbjct: 8   GLLGRKVGMMRIFTDDGDAIPVTVLDVSNNRVTQVKTVATDGYSALQVAFGARKASRVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P  G  +   V   + L EFRV  +       G+V   S F  GQLVDV G +IGKG++G
Sbjct: 68  PEAGHLAKAGVEAGEVLKEFRVTAEIAGQYQPGAVVPVSLFAAGQLVDVQGTSIGKGYAG 127

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHNFG  RA+HG S SH   GS    QDPGRVF  KKM G MG   VT +NL++V V
Sbjct: 128 TIKRHNFGSQRASHGNSRSHNVPGSISMAQDPGRVFPGKKMTGHMGDETVTTQNLDIVRV 187

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           D+ R L+LV+G VPGA KN  ++VR + K  +    +
Sbjct: 188 DEARSLLLVRGAVPGA-KNGHVVVRPAVKVKLKKGAQ 223


>gi|229818240|ref|ZP_04448522.1| hypothetical protein BIFANG_03538 [Bifidobacterium angulatum DSM
           20098]
 gi|229784491|gb|EEP20605.1| hypothetical protein BIFANG_03538 [Bifidobacterium angulatum DSM
           20098]
          Length = 216

 Score =  257 bits (658), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 83/212 (39%), Positives = 120/212 (56%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R  ++ RKLGM+ V++  G  +PVT++ +    V   +T + +GY AVQ+G G+     V
Sbjct: 7   RKALLGRKLGMSQVWDENGFFVPVTLVDVSTNVVTAIKTEETDGYTAVQIGYGQIDPTKV 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G F+   V+P++ L E R     +   +G   +   F  G  VDVTG T GKGF+
Sbjct: 67  TKPLAGHFAKAGVTPRRHLVEVREDNATE-YELGQELTAEVFEEGAEVDVTGTTKGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F   R THG   + R  GS G    P R+ K K+MAGRMG    TV+NL +VS
Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTSTVQNLTIVS 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D + G++ +KG +PG  K   +LVR + K A
Sbjct: 186 ADVENGVLAIKGAIPGP-KGGIVLVRSAVKGA 216


>gi|254383172|ref|ZP_04998526.1| 50S ribosomal protein L3 [Streptomyces sp. Mg1]
 gi|194342071|gb|EDX23037.1| 50S ribosomal protein L3 [Streptomyces sp. Mg1]
          Length = 214

 Score =  257 bits (658), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 98/211 (46%), Positives = 129/211 (61%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            GV+  KLGMT V++   R +PVTV+    C V   RT D +GY +VQ+  GE   + V+
Sbjct: 6   KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDIDGYESVQIAFGEIDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G
Sbjct: 66  KPLKGHFAKADVTPRRHLVELRTS-DASEYTLGQEITAQVFESGVKVDVTGNSKGKGFAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF GL A HGV   HRS GS G    PGRVFK  +MAGRMG  RVT +NL + +V
Sbjct: 125 VMKRHNFRGLGAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+L+KG VPG      +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214


>gi|322410858|gb|EFY01766.1| 50S ribosomal protein L3 [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 208

 Score =  257 bits (658), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 93/213 (43%), Positives = 132/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTETGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VGS  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSEITVDTFVAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK++AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTIQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207


>gi|139438580|ref|ZP_01772096.1| Hypothetical protein COLAER_01094 [Collinsella aerofaciens ATCC
           25986]
 gi|133776119|gb|EBA39939.1| Hypothetical protein COLAER_01094 [Collinsella aerofaciens ATCC
           25986]
          Length = 203

 Score =  257 bits (658), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 90/205 (43%), Positives = 119/205 (58%), Gaps = 3/205 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RK+GMT V++ +   +PVTV+    C V   +T   +GY AVQ+G G+ K KNV+KP
Sbjct: 2   ILGRKIGMTQVWDEDDNVVPVTVIQAGPCAVSQVKTQATDGYDAVQIGFGDIKAKNVNKP 61

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M G F+   V P + L E RV+  ++   VG V + + F   + VDV G + GKGF G +
Sbjct: 62  MAGHFAKAGVEPVRFLREVRVENGEEH-KVGEVVTVADFADVEKVDVIGTSKGKGFQGRI 120

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR        THG     R  GS G    P RV K  KMAG MG  RVTVKNL VV +D 
Sbjct: 121 KRWGQRRGPMTHGSH-FQRHPGSIGQCAYPARVLKGVKMAGHMGNERVTVKNLSVVRIDA 179

Query: 185 KRGLILVKGCVPGAKKNSWILVRDS 209
           ++ LILVKG VPGA KN  + +R +
Sbjct: 180 EQNLILVKGAVPGA-KNGLVAIRMA 203


>gi|325261494|ref|ZP_08128232.1| 50S ribosomal protein L3 [Clostridium sp. D5]
 gi|324032948|gb|EGB94225.1| 50S ribosomal protein L3 [Clostridium sp. D5]
          Length = 226

 Score =  257 bits (658), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 89/228 (39%), Positives = 124/228 (54%), Gaps = 19/228 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58
           M+  ++A K+GMT ++N +G   PVTVL    C V   +T D +GY AVQVG  + K   
Sbjct: 1   MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTADNDGYSAVQVGFADKKEKI 60

Query: 59  --------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
                           V+K  +G F    VS K+ + EFR +  ++   +        F 
Sbjct: 61  VTKDKSGKKEIAHRNGVTKAEKGHFDKAGVSGKRYVKEFRFENAEE-YTLAQEIKADIFE 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  +D T ++ GKGF GA+KRHN      THG S  HR  GS G   DP +VFK KKM 
Sbjct: 120 AGDKIDATAVSKGKGFQGAIKRHNQSRGPMTHG-SKFHRHAGSNGSASDPSKVFKGKKMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           G+MG  ++TV+NLEVV VD +  L+LVKG VPG KK   + ++++ K+
Sbjct: 179 GQMGNKKITVQNLEVVRVDAENNLLLVKGSVPGPKK-CLVTLKETVKA 225


>gi|326792607|ref|YP_004310428.1| 50S ribosomal protein L3 [Clostridium lentocellum DSM 5427]
 gi|326543371|gb|ADZ85230.1| 50S ribosomal protein L3 [Clostridium lentocellum DSM 5427]
          Length = 209

 Score =  257 bits (658), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 90/212 (42%), Positives = 123/212 (58%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT +++     IPVTVL    C V   +T++ +GY A+QVG GE K K+
Sbjct: 1   MKKAILGKKIGMTQIFDENANLIPVTVLEAGPCVVTQKKTMENDGYEAIQVGFGEVKSKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V KP+ G F+   V  KK L EFR+ +D     VG+      F  G  VDV G + GKG+
Sbjct: 61  VIKPVAGHFAKAGVEAKKFLKEFRL-EDTSAYEVGTEIKADAFAAGDKVDVVGTSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+K++        HG S SHR  GS G    PGRV K K +   MG  +VTV+NLEV 
Sbjct: 120 QGAIKKYGQSRGPMGHG-SKSHRVAGSMGAATSPGRVMKGKGLPSHMGCVQVTVQNLEVA 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  + LIL+KG VPG  K + I ++DS K+
Sbjct: 179 RVDADKNLILIKGAVPGP-KGTIITIKDSCKA 209


>gi|222152265|ref|YP_002561440.1| 50S ribosomal protein L3 [Streptococcus uberis 0140J]
 gi|254803695|sp|B9DSV0|RL3_STRU0 RecName: Full=50S ribosomal protein L3
 gi|222113076|emb|CAR40439.1| 50S ribosomal protein L3 [Streptococcus uberis 0140J]
          Length = 208

 Score =  257 bits (658), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 93/213 (43%), Positives = 132/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VGS  +   F+ G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSEITVESFSAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207


>gi|83720557|ref|YP_443572.1| 50S ribosomal protein L3 [Burkholderia thailandensis E264]
 gi|257137645|ref|ZP_05585907.1| 50S ribosomal protein L3 [Burkholderia thailandensis E264]
 gi|109893417|sp|Q2SU27|RL3_BURTA RecName: Full=50S ribosomal protein L3
 gi|83654382|gb|ABC38445.1| ribosomal protein L3 [Burkholderia thailandensis E264]
          Length = 219

 Score =  257 bits (658), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 99/212 (46%), Positives = 132/212 (62%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR++ D    L  G+V  P  F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVQTGEILKEFRIEADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NFG  RA+HG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             +D  R L+LVKG VPGA K   + V  + K
Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211


>gi|239929514|ref|ZP_04686467.1| 50S ribosomal protein L3 [Streptomyces ghanaensis ATCC 14672]
 gi|291437839|ref|ZP_06577229.1| 50S ribosomal protein L3 [Streptomyces ghanaensis ATCC 14672]
 gi|291340734|gb|EFE67690.1| 50S ribosomal protein L3 [Streptomyces ghanaensis ATCC 14672]
          Length = 214

 Score =  257 bits (658), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 97/211 (45%), Positives = 128/211 (60%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+
Sbjct: 6   KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G
Sbjct: 66  KPLKGHFAKADVTPRRHLVEIRTS-DASEYTLGQEVTAEVFEAGVKVDVTGKSKGKGFAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNFGGL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +V
Sbjct: 125 VMKRHNFGGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+L+KG VPG      +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214


>gi|297159597|gb|ADI09309.1| 50S ribosomal protein L3 [Streptomyces bingchenggensis BCW-1]
          Length = 214

 Score =  257 bits (658), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 97/211 (45%), Positives = 126/211 (59%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            GV+  KLGMT V++   R +PVTV+    C V   RT D +GY AVQ+  GE   + V+
Sbjct: 6   KGVLGEKLGMTQVWDENNRIVPVTVVKAGPCVVTQVRTADSDGYDAVQIAFGEIDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKG +G
Sbjct: 66  KPLKGHFAKADVTPRRHLVELR-TADASEYALGQEVTAEVFESGVKVDVTGTSKGKGTAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +V
Sbjct: 125 VMKRHGFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+L+KG VPG      +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214


>gi|218290005|ref|ZP_03494182.1| ribosomal protein L3 [Alicyclobacillus acidocaldarius LAA1]
 gi|218239990|gb|EED07177.1| ribosomal protein L3 [Alicyclobacillus acidocaldarius LAA1]
          Length = 211

 Score =  257 bits (658), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 91/213 (42%), Positives = 124/213 (58%), Gaps = 4/213 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RKLGMT V+  +G  +PVTV+    C V+  R LDK+GY A+Q+G  + K    +
Sbjct: 2   KGILGRKLGMTQVFTEDGDVVPVTVIEAGPCVVLQKRVLDKDGYEAIQLGFADKKASRAT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G  +    +PK+ + E R     +   VG       F  G +VDVTG++ GKGF+G
Sbjct: 62  KPEIGHAAKAGTAPKRYIREIRGVN-VEEYEVGQQVKADIFAPGDIVDVTGVSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHN       HG S  HR  GS G    P R FK + MAGRMGG RVTV+NLEVV V
Sbjct: 121 PIKRHNQHRGPMAHG-SKYHRGVGSLGSIA-PNRTFKGQTMAGRMGGERVTVQNLEVVKV 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           D ++ +IL+KG VPG  +NS++ +R + K    
Sbjct: 179 DPEKNVILIKGSVPGP-RNSFVTIRSAVKQPAK 210


>gi|241204165|ref|YP_002975261.1| 50S ribosomal protein L3 [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858055|gb|ACS55722.1| ribosomal protein L3 [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 213

 Score =  257 bits (658), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 144/215 (66%), Positives = 171/215 (79%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  +PVTVL ++  QVV  RT++KNGY AVQ+GAG+AKVKN
Sbjct: 1   MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMEAVQVVATRTVEKNGYTAVQLGAGQAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+  NV PK K+ EFRV +D +LL +G+     +F  GQLVDVTG TIGKGF
Sbjct: 61  TSKAMRGNFAIANVEPKAKVTEFRVSED-NLLEIGTEIKAGHFAAGQLVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG  RVT +NLEVV
Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           S D+ RGLIL+KG VPG+ K +WI+VRD+ KSA  
Sbjct: 180 STDEDRGLILIKGAVPGS-KGAWIIVRDAVKSAAK 213


>gi|317054766|ref|YP_004103233.1| 50S ribosomal protein L3 [Ruminococcus albus 7]
 gi|315447035|gb|ADU20599.1| 50S ribosomal protein L3 [Ruminococcus albus 7]
          Length = 212

 Score =  257 bits (658), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 92/214 (42%), Positives = 133/214 (62%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +K+GMT +++  G+ +PVTV+    C VV  +T++K+GY AVQ+G GE + K 
Sbjct: 1   MQKGIIGKKIGMTQIFDEAGKIVPVTVVEAGPCVVVQKKTVEKDGYEAVQLGYGEIRAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F   +V+ K+ L EFR+  D   + VG +     F  G +VDV+G + G GF
Sbjct: 61  VNKPLQGHFKKADVAIKRTLKEFRL-ADISAVNVGDIVKADVFAEGDVVDVSGTSKGHGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG +KRHN   L+ THG    HR  GS G   DP R++K KKM G+ G  +VTV+NL VV
Sbjct: 120 SGTIKRHNGHRLKETHGTGPVHRHAGSYGACSDPSRIYKGKKMPGQYGNVKVTVQNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            VD +  LI +KG +PG  KN  + + DS K   
Sbjct: 180 KVDAENNLIAIKGAIPGP-KNGTVTICDSVKKKA 212


>gi|238025932|ref|YP_002910163.1| 50S ribosomal protein L3 [Burkholderia glumae BGR1]
 gi|237875126|gb|ACR27459.1| Ribosomal protein L3 [Burkholderia glumae BGR1]
          Length = 220

 Score =  257 bits (658), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 94/212 (44%), Positives = 129/212 (60%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 5   MSLGLVGRKVGMTRIFTADGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 64

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR+       L  G++  P  F VGQ VDV G++IGKG
Sbjct: 65  VTKPLAGHLAKAGVEAGEILKEFRIDATKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 124

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RATHG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 125 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 184

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             +D +R L+LVKG +PG  K   + V  + K
Sbjct: 185 ARIDAERKLLLVKGAIPG-TKGGKVFVTPAVK 215


>gi|332041523|gb|EGI77883.1| 50S ribosomal protein L3 [Hylemonella gracilis ATCC 19624]
          Length = 224

 Score =  257 bits (658), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 88/212 (41%), Positives = 125/212 (58%), Gaps = 3/212 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ RK+GM  ++  +G  +PVTV+ + + +V   +T D +GY+A+QV  G  +   V
Sbjct: 6   RLGLLGRKVGMMRLFTDDGDAVPVTVVDVSDNRVTQVKTQDNDGYVALQVTFGSRRASRV 65

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119
           +KP  G  +   V   + + EFRV  D       G+       F VGQ VDV G +IGKG
Sbjct: 66  TKPQAGHLAKAGVEAGEIIQEFRVAADTAAKYQAGAKLPVTEIFAVGQKVDVQGTSIGKG 125

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRHNF   RA+HG S SH   GS    QDPGRVF  K+M G MG   VT +NL+V
Sbjct: 126 FAGTIKRHNFSSQRASHGNSRSHNVPGSISMAQDPGRVFPGKRMTGHMGDETVTTQNLDV 185

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           + +D+ R L+L+KG VPG+    ++ VR + K
Sbjct: 186 IRIDEARQLLLIKGAVPGSA-GGFVTVRPAVK 216


>gi|323144964|ref|ZP_08079524.1| 50S ribosomal protein L3 [Succinatimonas hippei YIT 12066]
 gi|322415243|gb|EFY06017.1| 50S ribosomal protein L3 [Succinatimonas hippei YIT 12066]
          Length = 212

 Score =  257 bits (658), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 97/213 (45%), Positives = 132/213 (61%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RKLGMT V+N +G+ +PVTV+ ++  +V   + ++ +GY A+QV  GE K   
Sbjct: 1   MSIGLIGRKLGMTRVFNQDGKSVPVTVIQVEANRVTQIKNIETDGYCAIQVTTGERKTSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++K   G F+   V+  + L+EFR++  + +   VGS      F   + VDVTG + GKG
Sbjct: 61  MTKAEIGHFAKTGVAAGRGLWEFRLEPSELEAYQVGSEIKVDAFKDVKKVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            +G +KR+NF     THG S SHR  GSTG  Q PGRVFK KKM GRMG  RVTV  L++
Sbjct: 121 TAGTVKRYNFRTQDFTHGNSRSHRVPGSTGQNQTPGRVFKGKKMVGRMGNERVTVMCLDL 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LVKG VPGA     I VR S K+
Sbjct: 181 VRVDSERNLLLVKGAVPGANNGDLI-VRPSVKA 212


>gi|29653590|ref|NP_819282.1| LSU ribosomal protein L3P [Coxiella burnetii RSA 493]
 gi|161830671|ref|YP_001596185.1| 50S ribosomal protein L3 [Coxiella burnetii RSA 331]
 gi|212213250|ref|YP_002304186.1| 50S ribosomal protein L3 [Coxiella burnetii CbuG_Q212]
 gi|42559616|sp|Q83ES4|RL3_COXBU RecName: Full=50S ribosomal protein L3
 gi|189042841|sp|A9NAM4|RL3_COXBR RecName: Full=50S ribosomal protein L3
 gi|226725157|sp|B6J263|RL3_COXB2 RecName: Full=50S ribosomal protein L3
 gi|29540852|gb|AAO89796.1| LSU ribosomal protein L3P [Coxiella burnetii RSA 493]
 gi|161762538|gb|ABX78180.1| ribosomal protein L3 [Coxiella burnetii RSA 331]
 gi|212011660|gb|ACJ19041.1| LSU ribosomal protein L3P [Coxiella burnetii CbuG_Q212]
          Length = 217

 Score =  257 bits (658), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 88/213 (41%), Positives = 126/213 (59%), Gaps = 1/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK GMT ++   G  IPVTV+ +   ++   +T++ +GY A QV  G+     
Sbjct: 1   MSIGLIGRKCGMTRIFTETGSSIPVTVVEVILNRITQVKTVETDGYRAFQVAYGKKSSAR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G +S   V     L EFR+  ++      G       F  GQ+VDV G+T GKG
Sbjct: 61  VNKPLAGHYSKAAVEAGNALREFRLGNEELTEAKAGDELKVDIFKEGQVVDVRGLTRGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRHNF    ATHG S+SHR+ GS G  Q PGRV+K KKMAG++G    TV++ E+
Sbjct: 121 FAGTVKRHNFRTQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGQLGNVYCTVQSQEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           + VD +R L+L+KG +PGA     I+ + S K 
Sbjct: 181 IKVDVERNLLLIKGALPGAPGGEVIITQSSKKR 213


>gi|306832547|ref|ZP_07465687.1| 50S ribosomal protein L3 [Streptococcus bovis ATCC 700338]
 gi|304425305|gb|EFM28431.1| 50S ribosomal protein L3 [Streptococcus bovis ATCC 700338]
          Length = 208

 Score =  257 bits (658), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG   + + F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGQEITVNTFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207


>gi|50913439|ref|YP_059411.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS10394]
 gi|73917496|sp|Q5XED5|RL3_STRP6 RecName: Full=50S ribosomal protein L3
 gi|50902513|gb|AAT86228.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10394]
          Length = 208

 Score =  257 bits (658), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 95/213 (44%), Positives = 132/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  S   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK++AGRMGGNRVTV+NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +ILVKG VPGAKK S I ++ + K+A
Sbjct: 176 QVILEKNVILVKGNVPGAKK-SLITIKSAVKAA 207


>gi|88854682|ref|ZP_01129348.1| 50S ribosomal protein L3 [marine actinobacterium PHSC20C1]
 gi|88815843|gb|EAR25699.1| 50S ribosomal protein L3 [marine actinobacterium PHSC20C1]
          Length = 216

 Score =  257 bits (658), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 92/212 (43%), Positives = 130/212 (61%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
             G++ +KLGMT V++   + +PVTV+ +    V   RT + +GY AVQ+  G+   + V
Sbjct: 7   TKGLLGKKLGMTQVWDENNKLVPVTVVEITPNVVTQLRTPEVDGYSAVQIAYGQIDPRKV 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G F    V+P++ + E R     D   VG   +   FT G  VDV G + GKGF+
Sbjct: 67  NKPLTGHFDKAGVTPRRHITEIRTSDAAD-YTVGQELAVDIFTPGSKVDVVGTSKGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF G+ A+HG   +HR  GS G    P RVFK  +MAGRMGG+RVTV NL V +
Sbjct: 126 GVMKRHNFKGVSASHGSHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGDRVTVMNLAVHA 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           +D ++GL+L+KG VPGA +   + VR++ K A
Sbjct: 186 IDLEKGLVLIKGAVPGA-RGRIVFVRNAVKGA 216


>gi|323141356|ref|ZP_08076247.1| 50S ribosomal protein L3 [Phascolarctobacterium sp. YIT 12067]
 gi|322414105|gb|EFY04933.1| 50S ribosomal protein L3 [Phascolarctobacterium sp. YIT 12067]
          Length = 213

 Score =  257 bits (658), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 93/214 (43%), Positives = 132/214 (61%), Gaps = 5/214 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT ++  +GR IPVTV+    C V+ ++T + +GY AVQ+G GE K K+
Sbjct: 1   MAKGILGKKLGMTQIFEADGRLIPVTVVEAGPCVVLQNKTEETDGYNAVQLGFGEIKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KPM+G F    V+P K + E R+    +   VG   +   F  G+L+D +G++ GKGF
Sbjct: 61  TTKPMKGHFDKAGVTPVKFVRELRLAAPSE-YAVGDKIAADIFAAGELIDASGVSRGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KRHNF      HG S SHR  GS G       GRV K KK+ GRMG   VTV+ L 
Sbjct: 120 AGTIKRHNFSRGPMKHG-SKSHREPGSMGPMHSGPGGRVIKGKKLPGRMGNANVTVQRLT 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VV VD +R LILVKG +PGA   S+++++++ K 
Sbjct: 179 VVKVDAERNLILVKGAIPGA-TGSYVVLKETVKP 211


>gi|56477594|ref|YP_159183.1| 50S ribosomal protein L3 [Aromatoleum aromaticum EbN1]
 gi|81821104|sp|Q5P332|RL3_AZOSE RecName: Full=50S ribosomal protein L3
 gi|56313637|emb|CAI08282.1| 50S ribosomal protein L3 [Aromatoleum aromaticum EbN1]
          Length = 214

 Score =  257 bits (658), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 100/213 (46%), Positives = 131/213 (61%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +GR +PVTVL + N +V   +T + +GY AVQV  G+ +   
Sbjct: 1   MSLGLVGRKVGMTRIFAEDGRSVPVTVLDVSNNRVTQIKTPESDGYAAVQVTFGKRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQ-KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V KP+ G  +   V     L EFRV+ +       G V     F VGQ VDVTG +IGKG
Sbjct: 61  VGKPLAGHLAKAGVEAGHMLKEFRVETEQVAGFKAGDVVGVDLFAVGQKVDVTGTSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG  KRHNF   RA+HG S+SH + GS G  QDPGRVF  K+MAG+ G    T + LEV
Sbjct: 121 FSGVGKRHNFSSNRASHGNSVSHNAPGSIGMAQDPGRVFPGKRMAGQYGNTTCTTQGLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LVKG VPG+ K   ++VR + K+
Sbjct: 181 VRVDVERQLLLVKGAVPGS-KGGDVIVRPAVKA 212


>gi|159901426|ref|YP_001547673.1| 50S ribosomal protein L3 [Herpetosiphon aurantiacus ATCC 23779]
 gi|226726278|sp|A9B412|RL3_HERA2 RecName: Full=50S ribosomal protein L3
 gi|159894465|gb|ABX07545.1| ribosomal protein L3 [Herpetosiphon aurantiacus ATCC 23779]
          Length = 212

 Score =  257 bits (657), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 96/215 (44%), Positives = 133/215 (61%), Gaps = 3/215 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M +G++ RK+GMT ++  +G  IPVTV+    C V   RT DK+GY AVQ+G GE K + 
Sbjct: 1   MLNGILGRKIGMTQIFTEKGETIPVTVIEAGPCVVTQLRTKDKDGYEAVQLGFGEIKPRK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G   +     +          D +   VG V +   F +G+ +DV G + G+GF
Sbjct: 61  VTKPIQGHLKAAGRLVRFMRE--VKTTDLNAHNVGDVVNVDIFQIGEKIDVVGTSKGRGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH F G  ATHG S  HR+ GS G    PGRV+KN +MAGRMG +RVTV+NLEVV
Sbjct: 119 AGVVKRHGFRGGPATHGQSDRHRAPGSIGSGTTPGRVWKNMRMAGRMGNDRVTVQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            +D +R +ILVKG VPGA KN  ++V  + K+   
Sbjct: 179 KIDLERHVILVKGSVPGA-KNGLVMVSRAAKATKK 212


>gi|311744809|ref|ZP_07718605.1| 50S ribosomal protein L3 [Aeromicrobium marinum DSM 15272]
 gi|311311926|gb|EFQ81847.1| 50S ribosomal protein L3 [Aeromicrobium marinum DSM 15272]
          Length = 222

 Score =  257 bits (657), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 93/212 (43%), Positives = 130/212 (61%), Gaps = 2/212 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT V++ + R +PVTV+  D   V   RT + +GY AVQ+G GE   + V+K
Sbjct: 11  GLLGRKLGMTQVWDADNRVVPVTVIAADTNVVTQIRTRETDGYSAVQLGFGEIDGRKVNK 70

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ + E R +   D   +G   SP  F  G +VDVTG + GKGF+G 
Sbjct: 71  PQSGHFDKAGVTPRRHVVEIRTEAIAD-YTLGQEISPEIFAAGDVVDVTGTSKGKGFAGV 129

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G+ A+HG   +HR  GS G    PGRVFK  +MAG MG ++VT +NL V +VD
Sbjct: 130 MKRHGFHGVGASHGAHRNHRKPGSIGGCATPGRVFKGLRMAGHMGTDQVTTQNLTVHAVD 189

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            ++G+IL+KG VPG  K   +++R + K    
Sbjct: 190 LEKGVILIKGAVPGP-KGQLVVIRSAAKRIAK 220


>gi|118595335|ref|ZP_01552682.1| 50S ribosomal protein L3 [Methylophilales bacterium HTCC2181]
 gi|118441113|gb|EAV47740.1| 50S ribosomal protein L3 [Methylophilales bacterium HTCC2181]
          Length = 216

 Score =  257 bits (657), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 100/212 (47%), Positives = 135/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  EG  IPVTVL +   +V   + ++ +GY ++Q+  G +K   
Sbjct: 1   MSLGLIGRKVGMTRVFTDEGASIPVTVLEVVPNRVTQIKKINSDGYSSLQLAYGRSKSTK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++K + G ++  +V     L E R+ +++       S  S   F VGQ VDVTG TIGKG
Sbjct: 61  LNKSLVGHYAKASVEAGLGLHELRLSEEEISNYTNESSLSVEIFQVGQKVDVTGTTIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KRH+F   RATHGVSISH SHGSTG  QDPGRVF  KKMAG +G  + T +NLEV
Sbjct: 121 FQGPIKRHHFSSNRATHGVSISHNSHGSTGQCQDPGRVFPGKKMAGHLGDKKRTTQNLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V +D  R LIL+KG VPG+ K S +L+R + K
Sbjct: 181 VRIDSPRNLILIKGAVPGS-KGSDVLIRPAVK 211


>gi|22297625|ref|NP_680872.1| 50S ribosomal protein L3 [Thermosynechococcus elongatus BP-1]
 gi|42559634|sp|Q8DMN1|RL3_THEEB RecName: Full=50S ribosomal protein L3
 gi|22293802|dbj|BAC07634.1| 50S ribosomal protein L3 [Thermosynechococcus elongatus BP-1]
          Length = 212

 Score =  257 bits (657), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 87/210 (41%), Positives = 125/210 (59%), Gaps = 3/210 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT +++  GR +P+TV+    C +   +T   +GY A+QV  GE + KN
Sbjct: 1   MTVGILGTKLGMTQIFDEAGRSVPITVVQAGPCPITQIKTPQTDGYTAIQVAYGEVREKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +S+P RG  +     P + L EFR+ +D     +G   +   F+ GQLVDV G +IG+GF
Sbjct: 61  LSRPERGHLNKSQTPPMRHLREFRL-EDVSAYQLGQAITVDIFSPGQLVDVRGTSIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRHNF      HG S +HR  GSTG    PGRVF  K+MAGRMG   VT++ L+V+
Sbjct: 120 AGYQKRHNFKRGPMAHG-SKNHRLPGSTGAGTTPGRVFPGKRMAGRMGNTAVTIRKLQVM 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
            VD +R LIL+KG +PG    + + +  + 
Sbjct: 179 RVDPERNLILIKGALPGKP-GALVSITPAK 207


>gi|118591184|ref|ZP_01548583.1| 50S ribosomal protein L3 [Stappia aggregata IAM 12614]
 gi|118436260|gb|EAV42902.1| 50S ribosomal protein L3 [Stappia aggregata IAM 12614]
          Length = 225

 Score =  257 bits (657), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 124/204 (60%), Positives = 152/204 (74%), Gaps = 2/204 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT +YN  G  +PVTVL L+NCQVV HRT +KNGY A+Q+GAG  KVKN  K +RG F+ 
Sbjct: 1   MTRIYNDAGEHVPVTVLRLENCQVVAHRTDEKNGYTALQLGAGTRKVKNTPKALRGHFAV 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             V PK+ + EFRV  + +L+ VG+  +  ++  GQ VDVTG +IGKGF+GAMKRHNFGG
Sbjct: 61  AKVEPKRTVAEFRVSAE-NLIDVGAELTADHYVEGQFVDVTGTSIGKGFAGAMKRHNFGG 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
            RA+HG S+SHRSHGSTG  QDPGRVFK KKMAG MG  RVT +NL+VV  D +RGLI+V
Sbjct: 120 GRASHGNSVSHRSHGSTGQCQDPGRVFKGKKMAGHMGDARVTTQNLKVVRTDVERGLIMV 179

Query: 192 KGCVPGAKKNSWILVRDSFKSAVN 215
           +G VPGA K  WILVRD+ K A+ 
Sbjct: 180 EGSVPGA-KGGWILVRDAIKKALP 202


>gi|227549826|ref|ZP_03979875.1| 50S ribosomal protein L3 [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078081|gb|EEI16044.1| 50S ribosomal protein L3 [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 218

 Score =  257 bits (657), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 87/214 (40%), Positives = 122/214 (57%), Gaps = 2/214 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT +++ + R IPVTV+      V   RT + +GY A+Q+  G+   +   
Sbjct: 7   KGILGTKLGMTQIFDEDNRVIPVTVVEAGPVVVTQIRTAETDGYSAIQIAYGDIDPRKTK 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P++ + E R+  D     VG  F+ + F     VDV G T GKG++G
Sbjct: 67  KPQAGHFKKAGVNPRRHVAEIRMD-DTSAYEVGQEFNATIFDGDTYVDVVGTTKGKGYAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRH F G  A+HG   +HR  GS G    PGRVFK  +MAGRMG NRVT +NL++  +
Sbjct: 126 AMKRHGFAGQGASHGNQAAHRRVGSIGACATPGRVFKGTRMAGRMGSNRVTTQNLKIQRI 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           D    LIL+KG +PG  K S + V+ + K   + 
Sbjct: 186 DGDNNLILIKGAIPGV-KGSIVTVKTAVKGGAHA 218


>gi|325510539|gb|ADZ22175.1| 50S ribosomal protein L3 [Clostridium acetobutylicum EA 2018]
          Length = 210

 Score =  257 bits (657), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 89/212 (41%), Positives = 132/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +KLGMT ++N EG+ +PVTV+    C V+  +T +K GY A+QVG G  + K 
Sbjct: 2   MKKGILGKKLGMTQIFNEEGKVVPVTVIEAGPCVVIQKKTSEKEGYDAIQVGFGTIREKL 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F+  NV  K+ + EFR+ +D     VG+      F  G+ VDV+G++ GKGF
Sbjct: 62  VNKPLKGHFAKGNVELKRFVKEFRL-EDTSSYEVGAEIKADIFAAGEKVDVSGVSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G ++R        +HG S  HR+ GS G   DP R FK+KKM G MG    TV N+EV 
Sbjct: 121 QGTIRRWGAHRGPMSHG-SKFHRAVGSMGGSSDPSRTFKSKKMPGHMGHVNTTVLNVEVA 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ LIL+KG VPG  K S++++++S K+
Sbjct: 180 KVIPEKNLILIKGGVPGPNK-SFVVIKNSVKA 210


>gi|167564417|ref|ZP_02357333.1| 50S ribosomal protein L3 [Burkholderia oklahomensis EO147]
 gi|167571563|ref|ZP_02364437.1| 50S ribosomal protein L3 [Burkholderia oklahomensis C6786]
          Length = 219

 Score =  257 bits (657), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 97/212 (45%), Positives = 130/212 (61%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR+       L  G++  P  F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NFG  RA+HG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             +D  R L+LVKG VPGA K   + V  + K
Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211


>gi|119963305|ref|YP_948657.1| 50S ribosomal protein L3 [Arthrobacter aurescens TC1]
 gi|171704615|sp|A1R8U5|RL3_ARTAT RecName: Full=50S ribosomal protein L3
 gi|119950164|gb|ABM09075.1| ribosomal protein L3 [Arthrobacter aurescens TC1]
          Length = 216

 Score =  257 bits (657), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 89/211 (42%), Positives = 125/211 (59%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   + IPVTV+  D+  +   R  + +GY+AVQ+G G+   + V+
Sbjct: 8   KGLLGTKLGMTQVWDENNKLIPVTVVQADSNVITQLRNAEVDGYVAVQIGYGQIDPRKVT 67

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    V+P++ + E R   D     +G   S   F  GQ +DV G + GKGF+G
Sbjct: 68  KPLAGHFEKAGVTPRRHVVELR-TADAASYELGQELSVEIFEAGQKIDVVGTSKGKGFAG 126

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    P RVFK  KMAGRMG  R T  NL V ++
Sbjct: 127 VMKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGLKMAGRMGAERHTTLNLTVHAI 186

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++ L+L+KG VPGA +   +LVR + K A
Sbjct: 187 DAEKSLLLIKGAVPGA-RGQVVLVRTAVKGA 216


>gi|50955566|ref|YP_062854.1| 50S ribosomal protein L3 [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|81826588|sp|Q6ACZ5|RL3_LEIXX RecName: Full=50S ribosomal protein L3
 gi|50952048|gb|AAT89749.1| 50S ribosomal protein L3 [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 219

 Score =  257 bits (657), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 94/211 (44%), Positives = 127/211 (60%), Gaps = 3/211 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT V++     IPVTV+ +    V   RT + +GY AVQ+  G+   + V+K
Sbjct: 11  GLLGKKLGMTQVWDENDTLIPVTVIEITPNVVTQVRTPEADGYNAVQIAYGQIDRRKVNK 70

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSG 122
           P  G F    V+P++ L E R   D      G   +    F  GQLVDV G +  KGF+G
Sbjct: 71  PSAGHFDKAGVTPRRHLTEVR-TADAAEYSAGQELTVDGTFEAGQLVDVVGTSKSKGFAG 129

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF G+ A+HG   +HR  GS G    P RVFK  +MAGRMGG RVTV NL+V ++
Sbjct: 130 VMKRHNFQGVSASHGAHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGERVTVLNLKVQAI 189

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+LVKG VPGA +   + VR++ K A
Sbjct: 190 DAEKGLLLVKGAVPGA-RGRIVFVRNAVKGA 219


>gi|22536243|ref|NP_687094.1| 50S ribosomal protein L3 [Streptococcus agalactiae 2603V/R]
 gi|25010133|ref|NP_734528.1| 50S ribosomal protein L3 [Streptococcus agalactiae NEM316]
 gi|76786764|ref|YP_328784.1| 50S ribosomal protein L3 [Streptococcus agalactiae A909]
 gi|76798231|ref|ZP_00780481.1| ribosomal protein L3 [Streptococcus agalactiae 18RS21]
 gi|77406990|ref|ZP_00784005.1| ribosomal protein L3 [Streptococcus agalactiae H36B]
 gi|77412293|ref|ZP_00788609.1| ribosomal protein L3 [Streptococcus agalactiae CJB111]
 gi|42559639|sp|Q8E2D1|RL3_STRA5 RecName: Full=50S ribosomal protein L3
 gi|42559641|sp|Q8E7T8|RL3_STRA3 RecName: Full=50S ribosomal protein L3
 gi|109893560|sp|Q3K3W9|RL3_STRA1 RecName: Full=50S ribosomal protein L3
 gi|22533063|gb|AAM98966.1|AE014194_11 ribosomal protein L3 [Streptococcus agalactiae 2603V/R]
 gi|23094484|emb|CAD45703.1| ribosomal protein L3 [Streptococcus agalactiae NEM316]
 gi|76561821|gb|ABA44405.1| ribosomal protein L3 [Streptococcus agalactiae A909]
 gi|76586440|gb|EAO62948.1| ribosomal protein L3 [Streptococcus agalactiae 18RS21]
 gi|77161683|gb|EAO72678.1| ribosomal protein L3 [Streptococcus agalactiae CJB111]
 gi|77174395|gb|EAO77249.1| ribosomal protein L3 [Streptococcus agalactiae H36B]
 gi|319743995|gb|EFV96375.1| 50S ribosomal protein L3 [Streptococcus agalactiae ATCC 13813]
          Length = 208

 Score =  257 bits (657), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 93/213 (43%), Positives = 132/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  S   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK++AGRMGGNRVTV+NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ ++L+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVVLIKGNVPGAKK-SLITIKSAVKAA 207


>gi|294101628|ref|YP_003553486.1| 50S ribosomal protein L3 [Aminobacterium colombiense DSM 12261]
 gi|293616608|gb|ADE56762.1| 50S ribosomal protein L3 [Aminobacterium colombiense DSM 12261]
          Length = 208

 Score =  257 bits (657), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 105/206 (50%), Positives = 135/206 (65%), Gaps = 2/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RKLGMT +YN  G+ +PVTV+    C VV  +T +KNGY AVQ+G GE K   
Sbjct: 1   MSIGILGRKLGMTQIYNEAGQAVPVTVIQAGPCPVVSLKTPEKNGYSAVQLGFGEIKPHK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP++G F   +V P++ L EFR+        VG   + S F  G+ ++V GM+ GKGF
Sbjct: 61  LTKPVKGQFDKASVEPQRYLREFRLDNVKG-YEVGQAITVSLFEEGEKINVVGMSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGG  ATHGVS +HR  GS+G    PG++FK K M GRMGG RVTVKNL VV
Sbjct: 120 AGVMKRFNFGGTFATHGVSKTHRHGGSSGASSYPGKIFKGKAMPGRMGGERVTVKNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
           +VD    L+LVKG VPGA KN  + V
Sbjct: 180 AVDTDNNLLLVKGAVPGA-KNDIVTV 204


>gi|289435898|ref|YP_003465770.1| hypothetical protein lse_2537 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289172142|emb|CBH28688.1| rplC [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 209

 Score =  257 bits (657), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 85/212 (40%), Positives = 128/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY AVQ+G  + + K 
Sbjct: 1   MTKGILGRKVGMTQVFTENGELIPVTVIEAAQNVVLQKKTVETDGYEAVQIGFEDKRAKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EFR   + D   +G+      F  G ++D TG++ GKGF
Sbjct: 61  SNKPEQGHVAKANTTPKRFIREFR-DVNLDEYEIGAEVKVDVFAEGDIIDATGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK + GRMGG ++T++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQITIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD ++ ++LVKG VPGAKK + + ++ + K+
Sbjct: 178 KVDVEKNVLLVKGNVPGAKK-ALVQIKTATKA 208


>gi|15896383|ref|NP_349732.1| 50S ribosomal protein L3 [Clostridium acetobutylicum ATCC 824]
 gi|42559679|sp|Q97EH8|RL3_CLOAB RecName: Full=50S ribosomal protein L3
 gi|15026199|gb|AAK81072.1|AE007808_25 Ribosomal protein L3 [Clostridium acetobutylicum ATCC 824]
          Length = 209

 Score =  257 bits (657), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 89/212 (41%), Positives = 132/212 (62%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +KLGMT ++N EG+ +PVTV+    C V+  +T +K GY A+QVG G  + K 
Sbjct: 1   MKKGILGKKLGMTQIFNEEGKVVPVTVIEAGPCVVIQKKTSEKEGYDAIQVGFGTIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F+  NV  K+ + EFR+ +D     VG+      F  G+ VDV+G++ GKGF
Sbjct: 61  VNKPLKGHFAKGNVELKRFVKEFRL-EDTSSYEVGAEIKADIFAAGEKVDVSGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G ++R        +HG S  HR+ GS G   DP R FK+KKM G MG    TV N+EV 
Sbjct: 120 QGTIRRWGAHRGPMSHG-SKFHRAVGSMGGSSDPSRTFKSKKMPGHMGHVNTTVLNVEVA 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ LIL+KG VPG  K S++++++S K+
Sbjct: 179 KVIPEKNLILIKGGVPGPNK-SFVVIKNSVKA 209


>gi|308446847|ref|XP_003087274.1| hypothetical protein CRE_26933 [Caenorhabditis remanei]
 gi|308258134|gb|EFP02087.1| hypothetical protein CRE_26933 [Caenorhabditis remanei]
          Length = 218

 Score =  257 bits (657), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 95/212 (44%), Positives = 133/212 (62%), Gaps = 3/212 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++  G+ +PVTV+ +    V   RT + +GY AVQ+ AG+   + V+
Sbjct: 9   KGLLGTKLGMTQVWDENGKVVPVTVIEVAPNVVTQIRTAEVDGYSAVQIAAGQIDPRKVN 68

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFS 121
           +P  G F+   V+P++ L E R   D     +G   +    F  GQ +DV G + GKGF+
Sbjct: 69  QPTAGHFAKAGVTPRRHLTEVR-TADAADYSLGQELTIDGTFEAGQKIDVVGTSKGKGFA 127

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF G+ A+HG   +HR  GS G    PGRVFK ++MAGRMGG RVTV+NL V +
Sbjct: 128 GVMKRHNFSGVSASHGAHRNHRKPGSIGGAATPGRVFKGQRMAGRMGGERVTVQNLTVHA 187

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           VD ++GLIL+KG VPGA +   + VR++ K A
Sbjct: 188 VDAEKGLILIKGAVPGA-RGRLVFVRNAVKGA 218


>gi|295677932|ref|YP_003606456.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1002]
 gi|295437775|gb|ADG16945.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1002]
          Length = 219

 Score =  257 bits (657), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 96/212 (45%), Positives = 130/212 (61%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EF++       L  G+V  P  F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVQAGEILKEFQIDAAKAAELSSGTVVGPELFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RA+HG S SH   GS G  QDPGRVF  K+M G MG  +VTV+NLE+
Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDEKVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             +D  R L+LVKG VPGA K   + V  + K
Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211


>gi|254468609|ref|ZP_05082015.1| ribosomal protein L3 [beta proteobacterium KB13]
 gi|207087419|gb|EDZ64702.1| ribosomal protein L3 [beta proteobacterium KB13]
          Length = 216

 Score =  257 bits (657), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 98/213 (46%), Positives = 133/213 (62%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  +PVTVL +   +V   + +D NGY  +QV  G +K   
Sbjct: 1   MSLGLVGRKVGMTRLFTEDGNSVPVTVLEVVPNKVTQIKKIDDNGYNGLQVSYGNSKSSK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++K ++G  +   V     L EFRV  D+ +   +G     S F  GQ VD+TG TIGKG
Sbjct: 61  LNKSIKGHLAKAGVDSIDGLKEFRVTGDELNNFQLGGELKVSIFEAGQKVDITGTTIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KRH+FG  RATHG SISH + GSTG  QDPGRVFK KKMAG MG    T +NLEV
Sbjct: 121 FQGGIKRHHFGSQRATHGNSISHNAPGSTGMCQDPGRVFKGKKMAGHMGAVTRTTQNLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           + VD+ R LI++KG VPG+   S + ++ + K+
Sbjct: 181 IRVDENRNLIMIKGAVPGSS-GSNVTIKPAVKA 212


>gi|167587772|ref|ZP_02380160.1| ribosomal protein L3 [Burkholderia ubonensis Bu]
 gi|325529678|gb|EGD06541.1| 50S ribosomal protein L3 [Burkholderia sp. TJI49]
          Length = 216

 Score =  257 bits (657), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 96/212 (45%), Positives = 131/212 (61%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR+       L  G++  P  F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NFG  RA+HG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             +D +R L+LVKG +PGA K   + V  + K
Sbjct: 181 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVK 211


>gi|83949796|ref|ZP_00958529.1| Ribosomal protein L3 [Roseovarius nubinhibens ISM]
 gi|83837695|gb|EAP76991.1| Ribosomal  protein L3 [Roseovarius nubinhibens ISM]
          Length = 268

 Score =  257 bits (657), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 122/204 (59%), Positives = 148/204 (72%), Gaps = 2/204 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT ++  +G++IPVTVL LD  QVV  RT + +GY AVQ+GAG  K K VSK MRG FS 
Sbjct: 1   MTRLFMEDGKQIPVTVLQLDKLQVVAQRTPEAHGYSAVQLGAGSIKAKRVSKAMRGHFSI 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             V PK+K+ EFRV  + +L+ VG   +  ++  GQ VDV+G +IGKGF+GAMKRHNFGG
Sbjct: 61  AKVEPKRKIAEFRVAPE-NLINVGEEITADHYFEGQFVDVSGTSIGKGFAGAMKRHNFGG 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
           LRATHGVSISHRSHGSTG  QDPGRVFK KKMAG MG  RVT +NL+VV  D  RGLI+V
Sbjct: 120 LRATHGVSISHRSHGSTGQCQDPGRVFKGKKMAGHMGAARVTTQNLQVVKTDADRGLIMV 179

Query: 192 KGCVPGAKKNSWILVRDSFKSAVN 215
           KG VPG+ K  W+ V+D+ K    
Sbjct: 180 KGAVPGS-KGGWVTVKDAVKKPFP 202


>gi|156743948|ref|YP_001434077.1| 50S ribosomal protein L3 [Roseiflexus castenholzii DSM 13941]
 gi|189029477|sp|A7NR63|RL3_ROSCS RecName: Full=50S ribosomal protein L3
 gi|156235276|gb|ABU60059.1| ribosomal protein L3 [Roseiflexus castenholzii DSM 13941]
          Length = 210

 Score =  257 bits (657), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 94/213 (44%), Positives = 129/213 (60%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V++  G+ IPVT++ +  C V   RT +++GY AVQ+G  E + K+
Sbjct: 1   MIEGLLGRKIGMTQVFDPTGQVIPVTIIEVGPCVVTQIRTKERDGYEAVQIGYQEVRAKS 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G          + L EFR     D   VG V +   F  GQ VDV G + G+GF
Sbjct: 61  LTKPEQGHLRGAG-KLLRHLREFRTDNIADH-KVGDVLTVEMFAPGQRVDVIGTSKGRGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH FGG   THG S   R+ GS G   DPG ++KN +MAGRMG  RVTV+NL VV
Sbjct: 119 QGVVKRHGFGGGPRTHGQSDRLRAPGSIGAGTDPGHLWKNTRMAGRMGNQRVTVQNLTVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  +R L+LV+G VPGA  N  ++VR + K +
Sbjct: 179 DVVPERNLLLVRGSVPGAN-NGLVMVRRAIKGS 210


>gi|169335629|ref|ZP_02862822.1| hypothetical protein ANASTE_02049 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258367|gb|EDS72333.1| hypothetical protein ANASTE_02049 [Anaerofustis stercorihominis DSM
           17244]
          Length = 216

 Score =  257 bits (657), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 91/213 (42%), Positives = 127/213 (59%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A+K+GMT V++  G  IPVTVL    C V+  +T++K+GY AVQ+G GE   KN
Sbjct: 6   MKKAIMAKKVGMTQVFSETGEVIPVTVLQAGPCYVLQVKTVEKDGYEAVQLGYGEINEKN 65

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F    V P +K+ EFR   D      G+      F  G  +D+TG++ GKGF
Sbjct: 66  VNKPLKGHFEKAGVKPVRKIKEFRFD-DCSGYETGNEIKADVFEAGDKIDITGVSKGKGF 124

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S SHR  G+      PGRV K K M G MG  +VTV+NL VV
Sbjct: 125 QGAIKRHGQSRGPMGHG-SKSHRVVGAMSGASYPGRVMKGKNMPGHMGSEKVTVQNLTVV 183

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             D++  ++LVKG VPG+   S + + DS K++
Sbjct: 184 KADNENNMLLVKGAVPGSN-GSIVTITDSIKAS 215


>gi|153816252|ref|ZP_01968920.1| hypothetical protein RUMTOR_02501 [Ruminococcus torques ATCC 27756]
 gi|145846435|gb|EDK23353.1| hypothetical protein RUMTOR_02501 [Ruminococcus torques ATCC 27756]
          Length = 242

 Score =  257 bits (656), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 87/229 (37%), Positives = 123/229 (53%), Gaps = 20/229 (8%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV- 58
           M+  ++A K+GMT ++N  +G  IPVTVL    C V   +T++ +GY AVQVG  + K  
Sbjct: 16  MKKAILATKVGMTQIFNHEDGVLIPVTVLQAGPCVVTQVKTVENDGYSAVQVGYVDKKDK 75

Query: 59  ---------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
                            V+K  +G F    VS K+ + EFR    ++   +        F
Sbjct: 76  IVTKDGSGRKAIAHRNGVTKAEKGHFDKAGVSGKRYVKEFRFDNAEE-YALAQEIKADIF 134

Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
             G  +D T ++ GKGF GA+KRH       THG S  HR  GS G   DP +VFK KKM
Sbjct: 135 AEGDHIDATAISKGKGFQGAIKRHGQSRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKM 193

Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            G+MG  ++TV+NLE+V VD +  L+LVKG VPG KK   + ++++ K 
Sbjct: 194 PGQMGNKKITVQNLEIVRVDAENNLLLVKGSVPGPKK-CLVTIKETVKG 241


>gi|169830030|ref|YP_001700188.1| 50S ribosomal protein L3 [Lysinibacillus sphaericus C3-41]
 gi|226730531|sp|B1HMY0|RL3_LYSSC RecName: Full=50S ribosomal protein L3
 gi|168994518|gb|ACA42058.1| 50S ribosomal protein L3 [Lysinibacillus sphaericus C3-41]
          Length = 209

 Score =  257 bits (656), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 128/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY A+QVG  + +VK 
Sbjct: 1   MAKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTVETDGYEAIQVGFEDKRVKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EFR   + +   VG       F  G ++DVTG+T GKGF
Sbjct: 61  SNKPQQGHVAKANTAPKRFIREFR-NVNVEEYEVGQEVKVEIFAEGDVIDVTGVTKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFK KK+ G+MGGN VT++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKQKKLPGQMGGNVVTIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  R L+LVKG VPG+KK + + V+ + K+
Sbjct: 178 KVDTDRNLLLVKGNVPGSKK-ALVTVKTASKA 208


>gi|296875404|ref|ZP_06899478.1| 50S ribosomal protein L3 [Streptococcus parasanguinis ATCC 15912]
 gi|312866990|ref|ZP_07727201.1| 50S ribosomal protein L3 [Streptococcus parasanguinis F0405]
 gi|319945835|ref|ZP_08020085.1| 50S ribosomal protein L3 [Streptococcus australis ATCC 700641]
 gi|296433597|gb|EFH19370.1| 50S ribosomal protein L3 [Streptococcus parasanguinis ATCC 15912]
 gi|311097472|gb|EFQ55705.1| 50S ribosomal protein L3 [Streptococcus parasanguinis F0405]
 gi|319747900|gb|EFW00144.1| 50S ribosomal protein L3 [Streptococcus australis ATCC 700641]
          Length = 208

 Score =  257 bits (656), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 89/213 (41%), Positives = 129/213 (60%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY A+QVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNVEGLEVGAEITVDTFEAGDIVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFK K +AGRMGG+RVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+ 
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAG 207


>gi|330815249|ref|YP_004358954.1| 50S ribosomal protein L3 [Burkholderia gladioli BSR3]
 gi|327367642|gb|AEA58998.1| 50S ribosomal protein L3 [Burkholderia gladioli BSR3]
          Length = 216

 Score =  257 bits (656), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 96/212 (45%), Positives = 130/212 (61%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR+       L  G++  P  F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEVLKEFRIDAAKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RATHG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 121 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             +D +R L+LVKG +PGA K   + V  + K
Sbjct: 181 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVK 211


>gi|297571935|ref|YP_003697709.1| 50S ribosomal protein L3 [Arcanobacterium haemolyticum DSM 20595]
 gi|296932282|gb|ADH93090.1| 50S ribosomal protein L3 [Arcanobacterium haemolyticum DSM 20595]
          Length = 222

 Score =  257 bits (656), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 87/211 (41%), Positives = 125/211 (59%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
             ++  KLGMT V++   + +PVTV+ +    V   RT + +GY AVQ+ +GE K KNV+
Sbjct: 14  KALLGIKLGMTQVWDENAKLVPVTVVRVGKNVVTQVRTPEIDGYSAVQIASGELKAKNVT 73

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F    V P++ + E R   D +   +G       F  GQ +DV G + GKGF+G
Sbjct: 74  KPLKGHFEKAGVEPRRHVAEIR-TVDAEDYTLGQELGVETFEAGQTIDVIGKSKGKGFAG 132

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    P RVF+  +MAGRMG  RVTV+NL + ++
Sbjct: 133 VMKRHGFAGVSASHGAHRNHRKPGSIGACSTPSRVFRGMRMAGRMGNARVTVQNLTIHAI 192

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D +  LILV G +PG  K   +++R + K A
Sbjct: 193 DTENNLILVSGAIPG-NKGGVVVIRTAVKGA 222


>gi|229829429|ref|ZP_04455498.1| hypothetical protein GCWU000342_01519 [Shuttleworthia satelles DSM
           14600]
 gi|229791860|gb|EEP27974.1| hypothetical protein GCWU000342_01519 [Shuttleworthia satelles DSM
           14600]
          Length = 227

 Score =  257 bits (656), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 89/229 (38%), Positives = 122/229 (53%), Gaps = 19/229 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58
           M   ++A K+GMT ++N +G  IPVTVL    C V   +TL+ +GY AVQVG  + K   
Sbjct: 1   MNKAILATKVGMTQIFNEDGVLIPVTVLQAGPCAVTQVKTLENDGYEAVQVGFVDKKDKI 60

Query: 59  --------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
                           V+KP++G F+   V  KK + EFR +   +   +G       F 
Sbjct: 61  NTKDAAGRKEVHHRHGVNKPLKGHFAKAGVEGKKYVREFRFENASE-YKLGDEIKADIFA 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  VD T ++ GKGF GA+KR         HG S  HR  GS G   DP +VFK K M 
Sbjct: 120 EGDKVDATAISKGKGFQGAIKRLGQHRGPMAHG-SKFHRHQGSNGAASDPSKVFKGKGMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           G MG  +VT++NLEVV VD +  L+L+KG VPG  K S + +++S K+ 
Sbjct: 179 GHMGSVKVTIQNLEVVKVDAENNLLLIKGAVPGP-KRSLVTIKESVKAG 226


>gi|302558994|ref|ZP_07311336.1| 50S ribosomal protein L3 [Streptomyces griseoflavus Tu4000]
 gi|302476612|gb|EFL39705.1| 50S ribosomal protein L3 [Streptomyces griseoflavus Tu4000]
          Length = 214

 Score =  257 bits (656), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 96/211 (45%), Positives = 127/211 (60%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+
Sbjct: 6   KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G
Sbjct: 66  KPLKGHFAKADVTPRRHLVEIRTS-DASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +V
Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+L+KG VPG      +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214


>gi|261367803|ref|ZP_05980686.1| 50S ribosomal protein L3 [Subdoligranulum variabile DSM 15176]
 gi|282570601|gb|EFB76136.1| 50S ribosomal protein L3 [Subdoligranulum variabile DSM 15176]
          Length = 210

 Score =  257 bits (656), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +KLGMT +++  G+ +PVT++    C VV  +T++ +GY AVQ+G GE   K 
Sbjct: 1   MQKGIIGKKLGMTQLFDANGKVVPVTIIEAGPCTVVQKKTVESDGYQAVQMGYGEVSAKK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K  +G F   +V+PK+ L EFR   D   L VG +     F  G  VDV G + GKG+
Sbjct: 61  VNKAAKGHFDKADVAPKRTLREFRFD-DIASLNVGDILKADVFAEGDKVDVVGTSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR     LR +HG     R  GS G    P RVFK K++ G MG  RVTV+NL VV
Sbjct: 120 QGVIKRFGQHRLRESHGTGPVARHAGSNGSTSTPSRVFKGKRLPGHMGAVRVTVQNLSVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  LI +KG +PG  K S + + DS K+
Sbjct: 180 KVDAENNLIAIKGAIPGP-KGSVVTIHDSVKA 210


>gi|209884813|ref|YP_002288670.1| ribosomal protein L3 [Oligotropha carboxidovorans OM5]
 gi|226730542|sp|B6JET3|RL3_OLICO RecName: Full=50S ribosomal protein L3
 gi|209873009|gb|ACI92805.1| ribosomal protein L3 [Oligotropha carboxidovorans OM5]
          Length = 243

 Score =  257 bits (656), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 127/218 (58%), Positives = 156/218 (71%), Gaps = 2/218 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GM  V+   G  IPVTVL L NCQVV HRT DKNGY A+Q+GAG  K   
Sbjct: 1   MRSGVIAQKVGMMRVFTEAGEHIPVTVLKLGNCQVVGHRTKDKNGYTALQLGAGARKSVY 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + K  RG F+   V PK+K+ EFRV +D  ++PVG+     +F VGQ VDVTG +IGKG+
Sbjct: 61  MPKAERGQFAVAKVEPKRKVAEFRVSED-AIIPVGAEIQADHFVVGQFVDVTGTSIGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T  NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
             D +RGL+LV+G VPG+ K  WI VRD+ K  +  + 
Sbjct: 180 QTDVERGLLLVEGAVPGS-KGGWITVRDAVKKPLPKEA 216


>gi|307731255|ref|YP_003908479.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1003]
 gi|323527602|ref|YP_004229755.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1001]
 gi|307585790|gb|ADN59188.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1003]
 gi|323384604|gb|ADX56695.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1001]
          Length = 219

 Score =  257 bits (656), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 96/212 (45%), Positives = 129/212 (60%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGTRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EF++       L  G+V  P  F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVQAGEILKEFQIDAAKAAELSNGAVVGPDLFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RA+HG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 121 YAGTIKRYNFASGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             +D  R L+LVKG VPGA K   + V  + K
Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211


>gi|38233085|ref|NP_938852.1| 50S ribosomal protein L3 [Corynebacterium diphtheriae NCTC 13129]
 gi|42559574|sp|P60453|RL3_CORDI RecName: Full=50S ribosomal protein L3
 gi|38199344|emb|CAE48977.1| 50S ribosomal protein L3 [Corynebacterium diphtheriae]
          Length = 218

 Score =  257 bits (656), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 85/214 (39%), Positives = 121/214 (56%), Gaps = 2/214 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT +++ + R IPVTV+    C V   RT++ +GY A+Q+  GE   +  +
Sbjct: 7   KGILGTKLGMTQIFDEDNRVIPVTVVEAGPCVVTQIRTVETDGYNAIQIAYGEIDPRKAN 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P++ + E R+  D     +G   +   F     VDVTG T GKG++G
Sbjct: 67  KPAAGHFKKAGVTPRRHVAEIRMD-DVSGYELGQDVTVEIFEGINFVDVTGTTKGKGYAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRH F G  A HG   +HR  G  G    PGRVFK  +MAGRMG +RVT +NL+V  +
Sbjct: 126 AMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGSDRVTTQNLKVQKI 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           D    LIL+KG +PG  +   + V+ + K   + 
Sbjct: 186 DADANLILIKGAIPGV-RGGIVTVKTAVKGGAHA 218


>gi|91785465|ref|YP_560671.1| 50S ribosomal protein L3 [Burkholderia xenovorans LB400]
 gi|187925616|ref|YP_001897258.1| 50S ribosomal protein L3 [Burkholderia phytofirmans PsJN]
 gi|296163321|ref|ZP_06846082.1| 50S ribosomal protein L3 [Burkholderia sp. Ch1-1]
 gi|123062494|sp|Q13TH0|RL3_BURXL RecName: Full=50S ribosomal protein L3
 gi|226725143|sp|B2T751|RL3_BURPP RecName: Full=50S ribosomal protein L3
 gi|91689419|gb|ABE32619.1| LSU ribosomal protein L3P [Burkholderia xenovorans LB400]
 gi|187716810|gb|ACD18034.1| ribosomal protein L3 [Burkholderia phytofirmans PsJN]
 gi|295886460|gb|EFG66317.1| 50S ribosomal protein L3 [Burkholderia sp. Ch1-1]
          Length = 219

 Score =  257 bits (656), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 96/212 (45%), Positives = 130/212 (61%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGTRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EF++       L  G+V  P  F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVQAGEILKEFQIDAAKAAELSNGTVVGPDLFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RA+HG S SH   GS G  QDPGRVF  K+M G MG + VTV+NLE+
Sbjct: 121 YAGTIKRYNFASGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDDTVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             +D  R L+LVKG VPGA K   + V  + K
Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211


>gi|302769378|ref|XP_002968108.1| hypothetical protein SELMODRAFT_145395 [Selaginella moellendorffii]
 gi|300163752|gb|EFJ30362.1| hypothetical protein SELMODRAFT_145395 [Selaginella moellendorffii]
          Length = 255

 Score =  257 bits (656), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 110/212 (51%), Positives = 147/212 (69%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K GMT V++  GRRIP+TVL  D+ QVV  +T+D  G+ A+QVG G+ K K +
Sbjct: 7   RTGLIAVKCGMTAVWDKWGRRIPITVLWADDNQVVQVKTVDHEGFNALQVGCGQKKPKQL 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           S P  G F S  V  K+KL EF+V +D  LLPVG+  +  +F  GQ +DVTG++IGKGF 
Sbjct: 67  SIPELGHFRSKGVPIKRKLKEFQVSED-ALLPVGTALTVRHFVPGQFLDVTGVSIGKGFQ 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR  F G+ A+HG S+SHRSHG+TG R+ PG+VFKNKKMAG+MG  + TV  + V  
Sbjct: 126 GPMKRWGFAGMPASHGASLSHRSHGATGGRKSPGKVFKNKKMAGQMGNRKATVFCVWVYK 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V+ +R LI VKG VPG K N ++ +RDS+   
Sbjct: 186 VEPQRDLIWVKGQVPGCKGN-FVYIRDSWNKP 216


>gi|326773963|ref|ZP_08233245.1| 50S ribosomal protein L3 [Actinomyces viscosus C505]
 gi|326636102|gb|EGE37006.1| 50S ribosomal protein L3 [Actinomyces viscosus C505]
          Length = 222

 Score =  256 bits (655), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 89/209 (42%), Positives = 127/209 (60%), Gaps = 2/209 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++  KLGMT +++  G   PVTV+ +D   V   RT++ +GY AVQ+  G+     V+KP
Sbjct: 16  LLGTKLGMTQIWDENGVLRPVTVVRVDTNVVTQVRTIETDGYEAVQLAFGDIDASKVTKP 75

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + G F+   V P++ + E R     +  P G   +   F VGQLVDVTG + GKGF+G M
Sbjct: 76  LAGHFAKAGVEPRRHVAEIRTSLASEFTP-GQELAADTFEVGQLVDVTGTSKGKGFAGVM 134

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH F G+ A+HG   +HR  GS G    PGR+FK  +MAGRMG  R TV+NL++  +D 
Sbjct: 135 KRHGFAGVGASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGHARRTVQNLKIRGIDV 194

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +G++LV G +PG  K S ++VR + K A
Sbjct: 195 DKGVLLVNGAIPGP-KGSVVVVRTAVKGA 222


>gi|16801842|ref|NP_472110.1| 50S ribosomal protein L3 [Listeria innocua Clip11262]
 gi|116873998|ref|YP_850779.1| 50S ribosomal protein L3 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|42559673|sp|Q927K7|RL3_LISIN RecName: Full=50S ribosomal protein L3
 gi|123466648|sp|A0ALW8|RL3_LISW6 RecName: Full=50S ribosomal protein L3
 gi|16415317|emb|CAC98007.1| ribosomal protein L3 [Listeria innocua Clip11262]
 gi|116742876|emb|CAK22000.1| ribosomal protein L3 [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 209

 Score =  256 bits (655), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 84/212 (39%), Positives = 128/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY AVQ+G  + + K 
Sbjct: 1   MTKGILGRKVGMTQVFTENGELIPVTVIEAAQNVVLQKKTVETDGYEAVQIGFEDKRAKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  + +PK+ + EFR   + D   +G+      F  G ++D TG++ GKGF
Sbjct: 61  SNKPEQGHVAKADTTPKRFIREFR-DVNLDEYEIGAEVKVDVFAEGDIIDATGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK + GRMGG ++T++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQITIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD ++ ++LVKG VPGAKK + + ++ + K+
Sbjct: 178 KVDVEKNVLLVKGNVPGAKK-ALVQIKTATKA 208


>gi|25027078|ref|NP_737132.1| 50S ribosomal protein L3 [Corynebacterium efficiens YS-314]
 gi|259506793|ref|ZP_05749693.1| 50S ribosomal protein L3 [Corynebacterium efficiens YS-314]
 gi|42559646|sp|Q8FS80|RL3_COREF RecName: Full=50S ribosomal protein L3
 gi|23492358|dbj|BAC17332.1| putative 50S ribosomal protein L3 [Corynebacterium efficiens
           YS-314]
 gi|259165664|gb|EEW50218.1| 50S ribosomal protein L3 [Corynebacterium efficiens YS-314]
          Length = 218

 Score =  256 bits (655), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 86/214 (40%), Positives = 125/214 (58%), Gaps = 2/214 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT +++ E R IPVTV+    C V   RT++ +GY A+Q+  GE   + V+
Sbjct: 7   KGILGTKLGMTQIFDEENRVIPVTVVEAGPCVVSQIRTVETDGYNAIQIAYGEIDPRKVN 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +P+ G F    V+P++ + E R+  D     VG   +   F   + VDVTG + GKG++G
Sbjct: 67  QPLTGHFKKAGVTPRRHVTEIRMD-DVSGYEVGQDVTVEIFNDVKFVDVTGTSKGKGYAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRH F G  A HG   +HR  G  G    PGR+FK K+MAGRMG +RVT +NL+V  +
Sbjct: 126 AMKRHGFAGQGAGHGNQAAHRRVGGIGAAATPGRIFKGKRMAGRMGNDRVTTQNLKVQKI 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           D    LIL+KG +PG  +   + V+ + K   + 
Sbjct: 186 DADANLILIKGAIPG-NRGGIVTVKTAVKGGAHA 218


>gi|84494786|ref|ZP_00993905.1| putative ribosomal protein L3 [Janibacter sp. HTCC2649]
 gi|84384279|gb|EAQ00159.1| putative ribosomal protein L3 [Janibacter sp. HTCC2649]
          Length = 218

 Score =  256 bits (655), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 92/211 (43%), Positives = 126/211 (59%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            GV+ +KLGMT V++ E R IPVTV+    C V   R  + +GY AVQ+  G    + V+
Sbjct: 10  KGVLGKKLGMTQVWDAENRLIPVTVIEAGPCVVTQVRNAETDGYAAVQIAFGAIDPRKVT 69

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    V+P++ L E R   D     +G   +   F  GQ VD++  T GKGF+G
Sbjct: 70  KPLTGHFEKAGVTPRRHLVELR-TADAAEYSLGQELTAETFEAGQAVDISATTKGKGFAG 128

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ ++HG   +HR  GS G    PGRVFK  +MAGRMGG R T +NL + +V
Sbjct: 129 VMKRHGFHGVSSSHGSHKNHRKPGSIGGCATPGRVFKGMRMAGRMGGVRQTTQNLTIHAV 188

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
              +GL+LVKG VPG  + + +LVR++ K A
Sbjct: 189 VADKGLLLVKGAVPGP-RGAVVLVRNAVKGA 218


>gi|329938232|ref|ZP_08287683.1| 50S ribosomal protein L3 [Streptomyces griseoaurantiacus M045]
 gi|329302721|gb|EGG46611.1| 50S ribosomal protein L3 [Streptomyces griseoaurantiacus M045]
          Length = 214

 Score =  256 bits (655), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 95/211 (45%), Positives = 127/211 (60%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   R +PVTV+      V   RT D +GY +VQ+  G+   + V+
Sbjct: 6   KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDADGYESVQIAFGDIDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G
Sbjct: 66  KPLKGHFAKADVTPRRHLVEIR-TADAAEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +V
Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+L+KG VPG      +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214


>gi|291549416|emb|CBL25678.1| LSU ribosomal protein L3P [Ruminococcus torques L2-14]
          Length = 227

 Score =  256 bits (655), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 90/229 (39%), Positives = 126/229 (55%), Gaps = 20/229 (8%)

Query: 1   MRSGVVARKLGMTCVYNI-EGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV- 58
           M+  ++A K+GMT ++N  +G  IPVTVL    C V   +T++ +GY AVQVG  + K  
Sbjct: 1   MKKAILATKVGMTQIFNEEDGVLIPVTVLQAGPCVVTQVKTVENDGYSAVQVGYVDKKEK 60

Query: 59  ---------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
                            V+K  +G F    VS K+ + EFR +  ++   +        F
Sbjct: 61  IVTKDNSGKKSIAHRNGVTKAEKGHFDKAGVSGKRYVKEFRFENAEE-YTLAQEIKADIF 119

Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
             G  +D T ++ GKGF GA+KRHN      THG S  HR  GS G   DP +VFK KKM
Sbjct: 120 AAGDKIDATAVSKGKGFQGAIKRHNQSRGPMTHG-SKFHRHAGSNGSASDPSKVFKGKKM 178

Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            G+MG  ++TV+NLEVV VD +  LILVKG VPG KK   + ++++ K+
Sbjct: 179 PGQMGNKKITVQNLEVVRVDAENNLILVKGSVPGPKK-CLVTIKETVKA 226


>gi|205372069|ref|ZP_03224886.1| 50S ribosomal protein L3 [Bacillus coahuilensis m4-4]
          Length = 209

 Score =  256 bits (655), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 90/212 (42%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T D +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTADTDGYSAIQLGFEDMRAKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP  G  +    +PK+ + E R   +     VG       F  G +VDVTG++ GKGF
Sbjct: 61  ANKPRTGHAAKAETAPKRFIREIR-DANVAEYEVGQEVKVDTFAAGDVVDVTGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH       +HG S  HR  GS G    P RVFK K + GRMGG+ VTV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGDIVTVQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPGAKK + + V+ + K+
Sbjct: 178 KVDVERNLLLVKGNVPGAKK-ALVKVQSAVKA 208


>gi|85715131|ref|ZP_01046115.1| 50S ribosomal protein L3 [Nitrobacter sp. Nb-311A]
 gi|85698046|gb|EAQ35919.1| 50S ribosomal protein L3 [Nitrobacter sp. Nb-311A]
          Length = 247

 Score =  256 bits (655), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 127/219 (57%), Positives = 158/219 (72%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  IPVTVL L NCQV+ HRT +KNGY+A+Q+G+G  K   
Sbjct: 1   MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLSNCQVLGHRTSEKNGYVALQLGSGARKTVY 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + K  RG F+   V PK+K+ EFRV +D  L+PVG+     +F VGQ VDVTG ++GKG+
Sbjct: 61  MPKAERGQFAVAKVEPKRKVAEFRVSQD-SLIPVGAEIQADHFVVGQFVDVTGTSVGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G MG +R+T  NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
             D +RGLILV+G VPG+ K  WI VRD+ K  +  +  
Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWIAVRDAVKKPLPKEAP 217


>gi|255659503|ref|ZP_05404912.1| 50S ribosomal protein L3 [Mitsuokella multacida DSM 20544]
 gi|260848055|gb|EEX68062.1| 50S ribosomal protein L3 [Mitsuokella multacida DSM 20544]
          Length = 214

 Score =  256 bits (655), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 100/217 (46%), Positives = 135/217 (62%), Gaps = 5/217 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ RKLGMT ++  EG+ +PVTV+   N  V+ ++T++ +GY AVQ+G GE K   
Sbjct: 1   MSKAILGRKLGMTQIFTEEGKVVPVTVVESGNNVVIQNKTVESDGYNAVQLGFGEVKENK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F    VSP K + E R+  D     VG       F+ G+LVDVTG + GKGF
Sbjct: 61  VNKPLKGHFEKAGVSPVKFIREMRL-ADASEYKVGDTIGVDIFSAGELVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KRHNF      HG S SHR  GSTG       GRV K KK+ GRMGG RVTV+ L 
Sbjct: 120 AGGIKRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLT 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           VV VD  R LIL+KG +PG KK S+++++++ K   N
Sbjct: 179 VVRVDADRNLILIKGAIPGPKK-SFVVIKNTVKPGKN 214


>gi|115350322|ref|YP_772161.1| 50S ribosomal protein L3 [Burkholderia ambifaria AMMD]
 gi|134294443|ref|YP_001118178.1| 50S ribosomal protein L3 [Burkholderia vietnamiensis G4]
 gi|122324266|sp|Q0BJ46|RL3_BURCM RecName: Full=50S ribosomal protein L3
 gi|166233128|sp|A4JAP0|RL3_BURVG RecName: Full=50S ribosomal protein L3
 gi|115280310|gb|ABI85827.1| LSU ribosomal protein L3P [Burkholderia ambifaria AMMD]
 gi|134137600|gb|ABO53343.1| LSU ribosomal protein L3P [Burkholderia vietnamiensis G4]
          Length = 217

 Score =  256 bits (655), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 95/212 (44%), Positives = 129/212 (60%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 2   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR+       L  G+V     F VGQ VDV G++IGKG
Sbjct: 62  VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGADLFEVGQKVDVQGVSIGKG 121

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RATHG S SH   GS G  QDPGRVF  K+M G +G   VTV+NLE+
Sbjct: 122 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTVTVQNLEI 181

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             +D +R L+LVKG +PGA K   + V  + K
Sbjct: 182 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVK 212


>gi|170700694|ref|ZP_02891689.1| ribosomal protein L3 [Burkholderia ambifaria IOP40-10]
 gi|171318348|ref|ZP_02907506.1| ribosomal protein L3 [Burkholderia ambifaria MEX-5]
 gi|172059341|ref|YP_001806993.1| 50S ribosomal protein L3 [Burkholderia ambifaria MC40-6]
 gi|212288249|sp|B1YRD0|RL3_BURA4 RecName: Full=50S ribosomal protein L3
 gi|170134364|gb|EDT02697.1| ribosomal protein L3 [Burkholderia ambifaria IOP40-10]
 gi|171096426|gb|EDT41325.1| ribosomal protein L3 [Burkholderia ambifaria MEX-5]
 gi|171991858|gb|ACB62777.1| ribosomal protein L3 [Burkholderia ambifaria MC40-6]
          Length = 216

 Score =  256 bits (655), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 95/212 (44%), Positives = 129/212 (60%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR+       L  G+V     F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGADLFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RATHG S SH   GS G  QDPGRVF  K+M G +G   VTV+NLE+
Sbjct: 121 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             +D +R L+LVKG +PGA K   + V  + K
Sbjct: 181 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVK 211


>gi|27380511|ref|NP_772040.1| 50S ribosomal protein L3 [Bradyrhizobium japonicum USDA 110]
 gi|42559627|sp|Q89J84|RL3_BRAJA RecName: Full=50S ribosomal protein L3
 gi|27353675|dbj|BAC50665.1| 50S ribosomal protein L3 [Bradyrhizobium japonicum USDA 110]
          Length = 238

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 126/219 (57%), Positives = 158/219 (72%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  IPVTVL L NCQVV HRT +KNGY+A+Q+G+G  K   
Sbjct: 1   MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLGNCQVVGHRTEEKNGYVALQLGSGSRKTVY 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + K  RG F+   V PK+++ EFRV  D  ++PVG+     +F VGQ VDVTG ++GKGF
Sbjct: 61  MPKAERGQFAVAKVEPKRRVEEFRVTAD-AMIPVGAEIQADHFVVGQFVDVTGTSVGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ +KNKKM G MG +R+T  NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTWKNKKMPGHMGVDRITTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            +D +RGLILV+G VPG+ K  WI VRD+ K  +  +  
Sbjct: 180 QLDVERGLILVEGAVPGS-KGGWIRVRDAVKKPLPKEAP 217


>gi|289523369|ref|ZP_06440223.1| 50S ribosomal protein L3 [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503061|gb|EFD24225.1| 50S ribosomal protein L3 [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 209

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 92/206 (44%), Positives = 129/206 (62%), Gaps = 2/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT +++ EG+ +PVTV+    C+VV  R  +   Y A+ +G G+ K   
Sbjct: 1   MSLGILGVKVGMTQIFDEEGQAVPVTVVEAGPCKVVALRRPEVEMYSAIVLGFGKVKAHR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KPM G +    + PK+ L EFR+  D     VG     + F VG++VDVTG + GKGF
Sbjct: 61  LNKPMLGVYKKAGIEPKRWLREFRLD-DVTGYEVGQTIDVTIFEVGEVVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRH FGG  A+HG S+ HR  GS+G    P  VFK K M GRMG  RVTVKNL+VV
Sbjct: 120 AGVMKRHGFGGGPASHGASLFHRRAGSSGASSFPSHVFKGKTMPGRMGNERVTVKNLKVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
           +VD +  L+L+KG +PG  +N  ++V
Sbjct: 180 AVDKENNLLLIKGAIPGP-RNGLVMV 204


>gi|307328030|ref|ZP_07607211.1| 50S ribosomal protein L3 [Streptomyces violaceusniger Tu 4113]
 gi|306886335|gb|EFN17340.1| 50S ribosomal protein L3 [Streptomyces violaceusniger Tu 4113]
          Length = 214

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 97/211 (45%), Positives = 126/211 (59%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            GV+  KLGMT V++   R +PVTV+    C V   RT D +GY AVQ+  GE   + V+
Sbjct: 6   KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTDDADGYSAVQIAFGEIDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKG +G
Sbjct: 66  KPLKGHFAKADVTPRRHLVELRTT-DAGEYTLGQEVTAEVFESGVRVDVTGTSKGKGTAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +V
Sbjct: 125 VMKRHGFAGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+L+KG VPG      +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214


>gi|209521385|ref|ZP_03270098.1| ribosomal protein L3 [Burkholderia sp. H160]
 gi|209498205|gb|EDZ98347.1| ribosomal protein L3 [Burkholderia sp. H160]
          Length = 219

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 96/212 (45%), Positives = 130/212 (61%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVTFGTRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EF++       L  G+V  P  F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVQAGEILKEFQIDAAKAAELSNGTVVGPELFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RA+HG S SH   GS G  QDPGRVF  K+M G MG  +VTV+NLE+
Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDEKVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             +D  R L+LVKG VPGA K   + V  + K
Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211


>gi|309812372|ref|ZP_07706127.1| 50S ribosomal protein L3 [Dermacoccus sp. Ellin185]
 gi|308433677|gb|EFP57554.1| 50S ribosomal protein L3 [Dermacoccus sp. Ellin185]
          Length = 210

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 94/211 (44%), Positives = 129/211 (61%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++ + R IPVTV+ +  C V   R+   +GY AVQ+G G+   + V+
Sbjct: 2   KGLLGEKLGMTQVWDADNRLIPVTVVAVGPCVVTQLRSEGVDGYNAVQIGYGQIDPRKVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    V+P++ L E R   D     +G   +   F  GQ VDV G T GKGF+G
Sbjct: 62  KPLTGHFEKAGVTPRRHLAELRTS-DAGEYSLGQELTAEAFEAGQKVDVVGRTKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    PGRVFK  +MAGRMGG R T +NL++ +V
Sbjct: 121 VMKRHGFAGVSASHGAHRNHRKPGSIGGCATPGRVFKGMRMAGRMGGVRQTTQNLQIHAV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+L+KG VPG    + +LVR + K A
Sbjct: 181 DAEKGLLLIKGAVPGPA-GAVVLVRTAIKGA 210


>gi|325068030|ref|ZP_08126703.1| 50S ribosomal protein L3 [Actinomyces oris K20]
          Length = 222

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 89/209 (42%), Positives = 128/209 (61%), Gaps = 2/209 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++  KLGMT +++  G   PVTV+ +D   V   RT++ +GY AVQ+  G+   + V+KP
Sbjct: 16  LLGTKLGMTQIWDENGVLRPVTVVRVDTNVVTQVRTIETDGYEAVQLAFGDIDARKVTKP 75

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + G F+   V P++ + E R     +  P G   +   F VGQLVDVTG + GKGF+G M
Sbjct: 76  LAGHFAKAGVEPRRHVAEIRTSLASEFTP-GQELAADTFEVGQLVDVTGTSKGKGFAGVM 134

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH F G+ A+HG   +HR  GS G    PGR+FK  +MAGRMG  R TV+NL++  +D 
Sbjct: 135 KRHGFAGVGASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGHARRTVQNLKIRGIDV 194

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +G++LV G +PG  K S ++VR + K A
Sbjct: 195 DKGVLLVNGAIPGP-KGSVVVVRTAVKGA 222


>gi|51894210|ref|YP_076901.1| 50S ribosomal protein L3 [Symbiobacterium thermophilum IAM 14863]
 gi|81826004|sp|Q67JU3|RL3_SYMTH RecName: Full=50S ribosomal protein L3
 gi|51857899|dbj|BAD42057.1| 50S ribosomal protein L3 [Symbiobacterium thermophilum IAM 14863]
          Length = 216

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 98/210 (46%), Positives = 132/210 (62%), Gaps = 4/210 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +KLGMT ++  +G+ IPVTV+    C VV  +T   +GY AVQ+G GE +   
Sbjct: 1   MQKGILGKKLGMTQIFAPDGKIIPVTVVEAGPCVVVQKKTTATDGYNAVQLGFGEIRETL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F    V   + L EFR+  D + L VG V     F  G+LVDVTG++ GKGF
Sbjct: 61  VNKPLKGHFEKHQVKATRYLREFRLD-DVESLNVGDVIKADIFAEGELVDVTGISRGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NF    ++HG S  HR  GS G R+   RV K +K+ GR+GG RVTV  L VV
Sbjct: 120 AGGVKRWNFNRGPSSHG-SKYHRRPGSLGQRRW-ARVPKGRKLPGRLGGERVTVLGLRVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
            VD ++ LIL+KG VPGA K S I +RDS 
Sbjct: 178 KVDPEKNLILIKGAVPGA-KGSLITIRDSV 206


>gi|304310016|ref|YP_003809614.1| 50S ribosomal protein L3 [gamma proteobacterium HdN1]
 gi|301795749|emb|CBL43948.1| 50S ribosomal protein L3 [gamma proteobacterium HdN1]
          Length = 212

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 100/213 (46%), Positives = 136/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V +K GMT ++N +G    VTV+ +D  +V + +++D++GY AVQV  G  K   
Sbjct: 1   MAIGLVGKKCGMTRIFNEDGSSTSVTVIEVDPNRVTLIKSVDRDGYSAVQVTTGVRKAST 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G FS   V     L+EFR   D  + L VG     S F  GQ VDVTG++ GKG
Sbjct: 61  VNKAEAGLFSKAGVEAGSGLWEFRFPDDAAITLSVGDSVGVSIFEAGQAVDVTGVSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KR NF    ATHG S+SHR+ GS G RQ PGRVFK KKM+G +G  +VTV++L++
Sbjct: 121 FAGVVKRWNFRTQDATHGNSLSHRAPGSIGQRQTPGRVFKGKKMSGHLGDAQVTVQSLQL 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LVKG VPGA  N+ ++VR + K 
Sbjct: 181 VRVDVERNLLLVKGAVPGAAGNN-VIVRPALKG 212


>gi|325678624|ref|ZP_08158234.1| 50S ribosomal protein L3 [Ruminococcus albus 8]
 gi|324109674|gb|EGC03880.1| 50S ribosomal protein L3 [Ruminococcus albus 8]
          Length = 212

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 91/214 (42%), Positives = 133/214 (62%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +K+GMT +++  G+ +PVTV+    C VV  +T++ +GY AVQ+G GE + K 
Sbjct: 1   MQKGIIGKKIGMTQIFDETGKVVPVTVVEAGPCVVVQKKTVENDGYEAVQLGYGEIRAKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F   +V+ K+ L EF++  D   + VG +     FT G +VDV+G + G GF
Sbjct: 61  VNKPLQGHFKKADVAMKRTLKEFKL-ADAANMNVGDIVKAEVFTEGDVVDVSGTSKGHGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG +KRHN   L+ THG    HR  GS G   DP R++K KKM G+ G  +VTV+NL VV
Sbjct: 120 SGTIKRHNGHRLKETHGTGPVHRHAGSYGACSDPSRIYKGKKMPGQYGNVKVTVQNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            VD +  LI +KG +PG  KN  + + DS K   
Sbjct: 180 KVDAENNLIAIKGAIPGP-KNGTVTICDSVKKKA 212


>gi|90424937|ref|YP_533307.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris BisB18]
 gi|109893548|sp|Q211E8|RL3_RHOPB RecName: Full=50S ribosomal protein L3
 gi|90106951|gb|ABD88988.1| LSU ribosomal protein L3P [Rhodopseudomonas palustris BisB18]
          Length = 243

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 126/219 (57%), Positives = 156/219 (71%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT V+   G  IPVTVL L NCQV+ HRT +KNGY+A+Q+G+G  K   
Sbjct: 1   MRSGVIAQKVGMTRVFTETGEHIPVTVLKLGNCQVLGHRTTEKNGYVAMQLGSGTRKTVY 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + K  RG F+   V PK+K+ EFRV +D  L+PVG+     +F VGQ VDVTG ++GKGF
Sbjct: 61  LPKAERGQFAVAKVEPKRKVAEFRVSED-ALIPVGAEIQADHFVVGQFVDVTGTSVGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T  NL VV
Sbjct: 120 AGGIKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
             D  RGLILV+G VPG+ K  WI VRD+ K  +     
Sbjct: 180 QTDVARGLILVEGAVPGS-KGGWIAVRDAVKKVLPADAP 217


>gi|255326842|ref|ZP_05367918.1| 50S ribosomal protein L3 [Rothia mucilaginosa ATCC 25296]
 gi|283457543|ref|YP_003362126.1| 50S ribosomal protein L3 [Rothia mucilaginosa DY-18]
 gi|255296059|gb|EET75400.1| 50S ribosomal protein L3 [Rothia mucilaginosa ATCC 25296]
 gi|283133541|dbj|BAI64306.1| ribosomal protein L3 [Rothia mucilaginosa DY-18]
          Length = 218

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 88/211 (41%), Positives = 122/211 (57%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++ +G+ +PVTV+  D+  V   R  + +GY AVQ+G G    + V+
Sbjct: 10  KGLLGTKLGMTQVWDEDGKFVPVTVVKADSNVVTQIRNQETDGYEAVQIGFGAIDSRKVT 69

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    V+P++ + E R   D     +G   +   F  GQ VDV G T GKGF+G
Sbjct: 70  KPLAGHFEKAGVTPRRHIVELR-TADASEYSLGQELTVELFEAGQKVDVVGKTKGKGFAG 128

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    P RVFK  +MAGRMG  R T  NL +  V
Sbjct: 129 VMKRHGFKGVGASHGQHKNHRKPGSIGGASYPARVFKGMRMAGRMGAARHTTLNLTIQGV 188

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D +  ++L+KG +PG  K   +LVR + K A
Sbjct: 189 DAENNVLLIKGAIPGP-KGGVVLVRTAVKGA 218


>gi|309799058|ref|ZP_07693311.1| ribosomal protein L3 [Streptococcus infantis SK1302]
 gi|308117293|gb|EFO54716.1| ribosomal protein L3 [Streptococcus infantis SK1302]
          Length = 208

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 89/213 (41%), Positives = 129/213 (60%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY A+QVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNVEGLEVGAEITVETFAAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFK K +AGRMGG+RVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+ 
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAG 207


>gi|283782758|ref|YP_003373512.1| 50S ribosomal protein L3 [Gardnerella vaginalis 409-05]
 gi|297242968|ref|ZP_06926906.1| ribosomal protein L3 [Gardnerella vaginalis AMD]
 gi|298253073|ref|ZP_06976865.1| ribosomal protein L3 [Gardnerella vaginalis 5-1]
 gi|283442144|gb|ADB14610.1| 50S ribosomal protein L3 [Gardnerella vaginalis 409-05]
 gi|296889179|gb|EFH27913.1| ribosomal protein L3 [Gardnerella vaginalis AMD]
 gi|297532468|gb|EFH71354.1| ribosomal protein L3 [Gardnerella vaginalis 5-1]
          Length = 216

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 85/212 (40%), Positives = 122/212 (57%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+ ++ RKLGM+ V++  G  +PVT++ +    V   +T++ +GY AVQ+G G+     V
Sbjct: 7   RTALLGRKLGMSQVWDENGFFVPVTLVEVATNVVTAVKTVESDGYCAVQLGYGQIDPTKV 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G F+   V+P++ L E R +   D  P G   +   F  G  VDVTG T GKGF+
Sbjct: 67  TKPLAGHFAKAGVTPRRHLAEVRTENAADYQP-GQELTAELFAEGSEVDVTGTTKGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F   R THG   + R  GS G    P R+ K K+MAGRMG    T  NL +VS
Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTSTALNLTIVS 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D + G++ +KG VPG  K + +LVR + K A
Sbjct: 186 SDVENGILAIKGAVPGP-KGAIVLVRSAVKGA 216


>gi|153854970|ref|ZP_01996183.1| hypothetical protein DORLON_02189 [Dorea longicatena DSM 13814]
 gi|149752467|gb|EDM62398.1| hypothetical protein DORLON_02189 [Dorea longicatena DSM 13814]
          Length = 226

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 86/228 (37%), Positives = 123/228 (53%), Gaps = 19/228 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53
           M+  ++A K+GMT ++N +G   PVTVL    C V   +T++ +GY AVQVG        
Sbjct: 1   MKKAILATKVGMTQIFNEDGTLTPVTVLQAGPCAVTQIKTVENDGYEAVQVGFVDKKDKI 60

Query: 54  -----GEAKV----KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
                G  K       V+K  +G F+   V+ K+ + EF+ +   +   +G       F 
Sbjct: 61  INKDKGGKKEIVHRHGVTKAEQGHFAKAGVTGKRYVREFKFENASE-YELGQEIKADIFA 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  +D T ++ GKGF GA+KRHN       HG S  HR  GS G   DP +VFK K M 
Sbjct: 120 AGDKIDATAISKGKGFQGAIKRHNQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKHMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           G MG  ++TV+NL VV VD +  L+LVKG VPG KK S + ++++ K+
Sbjct: 179 GHMGSKKITVQNLVVVRVDAENNLLLVKGSVPGPKK-SLVTIKEAVKA 225


>gi|108797986|ref|YP_638183.1| 50S ribosomal protein L3 [Mycobacterium sp. MCS]
 gi|119867082|ref|YP_937034.1| 50S ribosomal protein L3 [Mycobacterium sp. KMS]
 gi|126433648|ref|YP_001069339.1| 50S ribosomal protein L3 [Mycobacterium sp. JLS]
 gi|123070590|sp|Q1BDA7|RL3_MYCSS RecName: Full=50S ribosomal protein L3
 gi|166233164|sp|A3PVC1|RL3_MYCSJ RecName: Full=50S ribosomal protein L3
 gi|166233165|sp|A1UBN6|RL3_MYCSK RecName: Full=50S ribosomal protein L3
 gi|108768405|gb|ABG07127.1| LSU ribosomal protein L3P [Mycobacterium sp. MCS]
 gi|119693171|gb|ABL90244.1| LSU ribosomal protein L3P [Mycobacterium sp. KMS]
 gi|126233448|gb|ABN96848.1| LSU ribosomal protein L3P [Mycobacterium sp. JLS]
          Length = 217

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 88/214 (41%), Positives = 125/214 (58%), Gaps = 3/214 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   + +PVTV+      V   RT +++GY AVQ+  GE   + V
Sbjct: 3   RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTPERDGYSAVQIAYGEISPRKV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +KP+ G F++  V+P++ L E R+  +       VG   +   F+ G  VDVTG + GKG
Sbjct: 63  NKPVTGQFAAAGVNPRRHLAELRLDDESAAADYEVGQELTAEVFSDGAYVDVTGTSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKRH F G  A HG    HR  GS G    PGRVFK  +M+GRMG +RVT +NL V
Sbjct: 123 FAGTMKRHGFKGQGAAHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGSDRVTTQNLVV 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             VD   G++L+KG +PG +    ++VR + K  
Sbjct: 183 HKVDAANGVLLIKGAIPG-RNGGLVMVRSAIKRG 215


>gi|271962632|ref|YP_003336828.1| 50S ribosomal protein L3P [Streptosporangium roseum DSM 43021]
 gi|270505807|gb|ACZ84085.1| LSU ribosomal protein L3P [Streptosporangium roseum DSM 43021]
          Length = 217

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 96/212 (45%), Positives = 132/212 (62%), Gaps = 2/212 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            GV+ +KLGMT V++ + R +PVTV+    C V   RT +K+GY AVQ+G G+   + V+
Sbjct: 6   KGVLGKKLGMTQVFDADNRMVPVTVVEAGPCVVTRVRTPEKDGYSAVQLGFGQVDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+  +    +++P++   E R  +D     +G   S   F  GQ VDVTG + GKGF+G
Sbjct: 66  KPLGDYLRKHDITPRRYFAEIR-TEDAGDYTLGQELSADTFEAGQFVDVTGKSKGKGFAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F GL A+HG    HRS GS G    PGRVFK  +MAGRMG  R TV++L+V +V
Sbjct: 125 VMKRHGFKGLSASHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNVRTTVQSLKVHAV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D ++GLIL+KG +PGA   S +LVR + K   
Sbjct: 185 DAEKGLILIKGAIPGAN-GSLVLVRTAAKKGA 215


>gi|325689231|gb|EGD31237.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK115]
          Length = 208

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 91/213 (42%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGELIPVTVIEAAPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK++AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTIQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+ 
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAG 207


>gi|226323010|ref|ZP_03798528.1| hypothetical protein COPCOM_00782 [Coprococcus comes ATCC 27758]
 gi|225208577|gb|EEG90931.1| hypothetical protein COPCOM_00782 [Coprococcus comes ATCC 27758]
          Length = 226

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 88/228 (38%), Positives = 124/228 (54%), Gaps = 19/228 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58
           M+  ++A K+GMT ++N +G   PVTVL    C V   +T++ +GY AVQVG  + K   
Sbjct: 1   MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQIKTVENDGYSAVQVGFVDKKDKI 60

Query: 59  --------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
                           V+K  +G F    V+ K+ + EF+ +  D+   +        F 
Sbjct: 61  VNVDKNGKKEIVHRHGVTKAEKGHFDKAGVTGKRFVKEFKFENADE-YQLAQEIKADIFE 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  VD T ++ GKGF GA+KRHN       HG S  HR  GS G   DP +VFK KKM 
Sbjct: 120 AGDKVDATAISKGKGFQGAIKRHNQHRGPMAHG-SKFHRHAGSNGAASDPSKVFKGKKMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           G MG  ++T++NLE+V VD +  L+LVKG VPG KK S + +++S KS
Sbjct: 179 GHMGAKKITIQNLEIVRVDVENNLLLVKGAVPGPKK-SLVTIKESVKS 225


>gi|302553542|ref|ZP_07305884.1| 50S ribosomal protein L3 [Streptomyces viridochromogenes DSM 40736]
 gi|302471160|gb|EFL34253.1| 50S ribosomal protein L3 [Streptomyces viridochromogenes DSM 40736]
          Length = 214

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 97/211 (45%), Positives = 127/211 (60%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+
Sbjct: 6   KGILGEKLGMTQVWDANNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G FS  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G
Sbjct: 66  KPLKGHFSKADVTPRRHLVEIR-TADASEYTLGQEITAEVFEAGVKVDVTGKSKGKGFAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +V
Sbjct: 125 VMKRHNFRGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+L+KG VPG      +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214


>gi|325123604|gb|ADY83127.1| 50S ribosomal protein L3 [Acinetobacter calcoaceticus PHEA-2]
          Length = 212

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 96/213 (45%), Positives = 134/213 (62%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+ +D  ++   +TL+ +GY AVQV  GE +   
Sbjct: 1   MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFRV + + +   VG       F VGQ+VDVTG + GKG
Sbjct: 61  VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFAVGQIVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVTV+ LE+
Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VS+D +R +++VKG +PGA     ++VR + K+
Sbjct: 181 VSIDAERSVLVVKGAIPGATGGD-VIVRPTIKA 212


>gi|307823442|ref|ZP_07653671.1| 50S ribosomal protein L3 [Methylobacter tundripaludum SV96]
 gi|307735427|gb|EFO06275.1| 50S ribosomal protein L3 [Methylobacter tundripaludum SV96]
          Length = 216

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 100/212 (47%), Positives = 138/212 (65%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK GMT V+  +G  +PVTVL +D+ +V   + ++ +GY ++QV AG+ K   
Sbjct: 1   MSIGLIGRKCGMTRVFCEDGSSVPVTVLQIDSNRVTQVKGIEVDGYRSIQVAAGDKKSSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K M G +++ NV+  + L+EFR++  +   L VGS  S   F+ GQ+VDV G +IGKG
Sbjct: 61  VNKAMAGHYAAANVTAGRGLWEFRLEDGEGEDLSVGSQLSLDVFSAGQVVDVQGKSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRHNF    ATHG S SHR  GS G  Q PGRVFK KKM G MG  +VTV+NL +
Sbjct: 121 FAGGIKRHNFSMQDATHGNSRSHRVLGSIGMCQTPGRVFKGKKMEGHMGAEKVTVQNLTI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            S+D  R LILVKG VPGA K   +++  + K
Sbjct: 181 HSIDTARNLILVKGAVPGA-KGGDVVITPAMK 211


>gi|227497181|ref|ZP_03927429.1| ribosomal protein L3 [Actinomyces urogenitalis DSM 15434]
 gi|226833312|gb|EEH65695.1| ribosomal protein L3 [Actinomyces urogenitalis DSM 15434]
          Length = 222

 Score =  255 bits (653), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 88/209 (42%), Positives = 126/209 (60%), Gaps = 2/209 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++  KLGMT +++  G   PVTV+ +D   V   RT++ +GY AVQ+  GE   + V+KP
Sbjct: 16  LLGTKLGMTQIWDENGVLRPVTVVRVDTNVVTQVRTIETDGYEAVQLAFGEIAERKVTKP 75

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + G F+   V+P++ + E R     +    G   +   F VGQ VDV G + GKGF+G M
Sbjct: 76  LAGHFAKAGVAPRRHVAEVRTSLASEF-EAGQELTADLFEVGQKVDVQGTSKGKGFAGVM 134

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH F G+ A+HG   +HR  GS G    PGR+FK  +MAGRMG    TV+NL+V  VD 
Sbjct: 135 KRHGFAGVSASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGHETTTVQNLKVRGVDV 194

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           ++G++LV G +PG  K S ++VR + K A
Sbjct: 195 EKGVLLVNGAIPGP-KGSVVVVRTAVKGA 222


>gi|148652238|ref|YP_001279331.1| 50S ribosomal protein L3 [Psychrobacter sp. PRwf-1]
 gi|172048471|sp|A5WCJ0|RL3_PSYWF RecName: Full=50S ribosomal protein L3
 gi|148571322|gb|ABQ93381.1| LSU ribosomal protein L3P [Psychrobacter sp. PRwf-1]
          Length = 212

 Score =  255 bits (653), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 98/213 (46%), Positives = 136/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V +K GMT V+   G  IPVTV+ +D  ++   +T D +GY A+Q+  GE +   
Sbjct: 1   MAIGLVGKKCGMTRVFTETGASIPVTVVEVDANRITQIKTNDTDGYQAIQITTGERRDSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V   + ++EFRV +++ +    GS  +   F  GQLVDVTG + GKG
Sbjct: 61  VTAAQKGHFAKAGVKAGRGVWEFRVTEEELEGREAGSEIAADLFEAGQLVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KRHNF    ATHG S+SHR  GSTG  Q PG+VFK KKM G+MG  RVTV+ LEV
Sbjct: 121 FQGGVKRHNFSMQDATHGNSVSHRVLGSTGQNQSPGKVFKGKKMPGQMGNKRVTVQGLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VSVD ++GL+++KG +PGA     ++VR S K+
Sbjct: 181 VSVDAEKGLLVIKGAIPGANGGD-VIVRPSIKA 212


>gi|257453271|ref|ZP_05618570.1| 50S ribosomal protein L3P [Fusobacterium sp. 3_1_5R]
 gi|257467134|ref|ZP_05631445.1| 50S ribosomal protein L3P [Fusobacterium gonidiaformans ATCC 25563]
 gi|315918265|ref|ZP_07914505.1| LSU ribosomal protein L3P [Fusobacterium gonidiaformans ATCC 25563]
 gi|317059805|ref|ZP_07924290.1| LSU ribosomal protein L3P [Fusobacterium sp. 3_1_5R]
 gi|313685481|gb|EFS22316.1| LSU ribosomal protein L3P [Fusobacterium sp. 3_1_5R]
 gi|313692140|gb|EFS28975.1| LSU ribosomal protein L3P [Fusobacterium gonidiaformans ATCC 25563]
          Length = 208

 Score =  255 bits (653), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 89/210 (42%), Positives = 133/210 (63%), Gaps = 3/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++A+K+GMT ++  +G+ +PVTV+      V+  +T + +GY A+Q+G  E K KN +
Sbjct: 2   SGILAKKIGMTQIF-EDGKFVPVTVVEAGPNYVLQKKTEESDGYTALQLGFDEKKEKNTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   V P++ + E +V    +   +G       F+  + VD+TG + GKG +G
Sbjct: 61  KPLMGIFNKAGVKPQRFVRELKVDS-VEGYELGQEIKVDVFSEVEYVDITGTSKGKGTAG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGG RATHGVS +HR  GS G    PG+V K  +MAGR G   VTV+NL+VV V
Sbjct: 120 VMKRHGFGGNRATHGVSRNHRLGGSIGQSSWPGKVLKGLRMAGRHGNATVTVQNLKVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +  L+L+KG VPGA KN +++++ + K 
Sbjct: 180 DAENNLLLIKGAVPGA-KNGYLVIKPAIKK 208


>gi|77409988|ref|ZP_00786570.1| ribosomal protein L3 [Streptococcus agalactiae COH1]
 gi|77171404|gb|EAO74691.1| ribosomal protein L3 [Streptococcus agalactiae COH1]
          Length = 208

 Score =  255 bits (653), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+  +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGIFGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  S   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK++AGRMGGNRVTV+NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ ++L+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVVLIKGNVPGAKK-SLITIKSAVKAA 207


>gi|227502654|ref|ZP_03932703.1| 50S ribosomal protein L3 [Corynebacterium accolens ATCC 49725]
 gi|306835219|ref|ZP_07468253.1| 50S ribosomal protein L3 [Corynebacterium accolens ATCC 49726]
 gi|227076384|gb|EEI14347.1| 50S ribosomal protein L3 [Corynebacterium accolens ATCC 49725]
 gi|304568899|gb|EFM44430.1| 50S ribosomal protein L3 [Corynebacterium accolens ATCC 49726]
          Length = 218

 Score =  255 bits (653), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 87/214 (40%), Positives = 122/214 (57%), Gaps = 2/214 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +KLGMT V++ E R +PVTV+    C V   RT + +GY A+Q+  GE   +  +
Sbjct: 7   KGILGKKLGMTQVFDDENRVVPVTVVEAGPCVVTQIRTPETDGYSAIQIAFGEIDPRKAN 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P++ + E R+  D     VG       F     VDVTG T G G++G
Sbjct: 67  KPESGHFKKAGVTPRRHVAEIRMD-DTSAYEVGQEVKVDIFEGITFVDVTGQTKGHGYAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRH F G  A HG   +HR  G  G    PGRVFK K+MAGRMG +RVT +NL++  V
Sbjct: 126 AMKRHGFQGQGAAHGNQAAHRRVGGIGGAATPGRVFKGKRMAGRMGHDRVTTQNLKIQKV 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           D +  L+L+KG +PGA +   + V+ + K   + 
Sbjct: 186 DVESNLLLIKGAIPGA-RGGLVTVKTAVKGGAHA 218


>gi|322388401|ref|ZP_08062004.1| 50S ribosomal protein L3 [Streptococcus infantis ATCC 700779]
 gi|321140714|gb|EFX36216.1| 50S ribosomal protein L3 [Streptococcus infantis ATCC 700779]
          Length = 208

 Score =  255 bits (653), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 89/213 (41%), Positives = 129/213 (60%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY A+QVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNVEGLEVGAEITVETFAAGDIVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFK K +AGRMGG+RVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+ 
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAG 207


>gi|257470826|ref|ZP_05634916.1| 50S ribosomal protein L3P [Fusobacterium ulcerans ATCC 49185]
          Length = 208

 Score =  255 bits (653), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 91/210 (43%), Positives = 134/210 (63%), Gaps = 3/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++A+K+GMT ++  +G+ IPVTV+      V+  +T++ +GY A+Q+G  E K KN +
Sbjct: 2   SGILAKKIGMTQIF-EDGKFIPVTVVEAGPNYVLQKKTVENDGYTALQLGFDEKKEKNTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    V+P++ + E RV    +   +G           + VD+TG + GKG +G
Sbjct: 61  KPIMGIFKKAGVNPQRFVKELRVDS-VEGFELGQEIKADVLAEVEYVDITGTSKGKGTAG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF G RA+HGVS +HR  GS G    PG+V + KKMAG+ G   VTV+NL+VV V
Sbjct: 120 VMKRHNFAGNRASHGVSRNHRLGGSIGMSSWPGKVLRGKKMAGQYGNATVTVQNLKVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +  L+L+KG VPG+ KNS+I+V+ + K 
Sbjct: 180 DVENNLLLIKGAVPGS-KNSYIVVKPAVKK 208


>gi|253581392|ref|ZP_04858618.1| ribosomal protein L3 [Fusobacterium varium ATCC 27725]
 gi|251836756|gb|EES65290.1| ribosomal protein L3 [Fusobacterium varium ATCC 27725]
          Length = 213

 Score =  255 bits (653), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 92/210 (43%), Positives = 135/210 (64%), Gaps = 3/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++A+K+GMT ++  +G+ IPVTV+      V+  +T++ +GY A+Q+G  E K KN +
Sbjct: 7   SGILAKKIGMTQIF-EDGKFIPVTVVEAGPNYVLQKKTVENDGYTALQLGFDEKKEKNTT 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    V+P++ + E RV    +   +G           + VD+TG + GKG +G
Sbjct: 66  KPIMGIFKKAGVNPQRFVKELRVDS-VEGFELGQEIKADVLAEVEYVDITGTSKGKGTAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNFGG RA+HGVS +HR  GS G    PG+V K K+MAG+ G   VTV+NL+VV V
Sbjct: 125 VMKRHNFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQYGNATVTVQNLKVVKV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +  L+L+KG VPG+ KNS+I+V+ + K 
Sbjct: 185 DVENNLLLIKGAVPGS-KNSYIVVKPAVKK 213


>gi|317050528|ref|YP_004111644.1| 50S ribosomal protein L3 [Desulfurispirillum indicum S5]
 gi|316945612|gb|ADU65088.1| 50S ribosomal protein L3 [Desulfurispirillum indicum S5]
          Length = 209

 Score =  255 bits (653), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 101/209 (48%), Positives = 131/209 (62%), Gaps = 4/209 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEA-KVKNVSK 63
           ++ +K+GMT ++  +G  IPVTV+    C VV  +T+D +GY AVQVG  EA K K VSK
Sbjct: 4   LIGKKIGMTQIFCEDGTVIPVTVVEAGPCTVVQVKTVDSDGYAAVQVGFEEALKEKRVSK 63

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F+   V+P++ L EFRV +D     VG   +   F  G  +DVTG + GKGF G 
Sbjct: 64  PLKGHFAKSGVAPQRHLKEFRV-EDPAGFSVGQQLTAEVFAAGDKIDVTGTSKGKGFQGV 122

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KRH FGG RATHG S  HR+ GS G    P R FKNKKM GRMGG   TV+ LEVV V 
Sbjct: 123 IKRHGFGGGRATHG-STFHRAPGSIGMCATPSRTFKNKKMPGRMGGKTTTVQCLEVVKVM 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
             + L+LVKG +PG+ K   I +  S K+
Sbjct: 182 ADQNLLLVKGAIPGS-KGGIIEISQSQKA 209


>gi|262377312|ref|ZP_06070536.1| 50S ribosomal protein L3 [Acinetobacter lwoffii SH145]
 gi|262307765|gb|EEY88904.1| 50S ribosomal protein L3 [Acinetobacter lwoffii SH145]
          Length = 214

 Score =  255 bits (653), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 93/213 (43%), Positives = 133/213 (62%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+ +D  ++   +TL+ +GY A+Q+  GE +   
Sbjct: 3   MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAIQITTGERRESR 62

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFR-VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFR  + D +   VG   +   F VGQ+VDVTG + GKG
Sbjct: 63  VTNAQKGHFAKAGVAAGRLVQEFRATEADLEGREVGGTLTVELFQVGQVVDVTGQSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVT + LE+
Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGAERVTTQGLEI 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V++D +R +++VKG VPGA     ++VR + K+
Sbjct: 183 VAIDTERSVLVVKGAVPGATGGD-VIVRPTIKA 214


>gi|221201565|ref|ZP_03574603.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD2M]
 gi|221207360|ref|ZP_03580370.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD2]
 gi|221213498|ref|ZP_03586473.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD1]
 gi|254253517|ref|ZP_04946835.1| Ribosomal protein L3 [Burkholderia dolosa AUO158]
 gi|124896126|gb|EAY70006.1| Ribosomal protein L3 [Burkholderia dolosa AUO158]
 gi|221166950|gb|EED99421.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD1]
 gi|221172948|gb|EEE05385.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD2]
 gi|221178381|gb|EEE10790.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD2M]
          Length = 220

 Score =  255 bits (653), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 95/212 (44%), Positives = 131/212 (61%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTV+ + + +V   +T++ +GY AVQV  G  +   
Sbjct: 5   MSLGLVGRKVGMTRIFTAEGDSIPVTVVDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 64

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR+       L  G++  P  F VGQ VDV G++IGKG
Sbjct: 65  VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 124

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NFG  RA+HG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 125 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 184

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             +D +R L+LVKG +PGA K   + V  + K
Sbjct: 185 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVK 215


>gi|161523429|ref|YP_001578441.1| 50S ribosomal protein L3 [Burkholderia multivorans ATCC 17616]
 gi|189351798|ref|YP_001947426.1| 50S ribosomal protein L3 [Burkholderia multivorans ATCC 17616]
 gi|226725141|sp|A9ADJ3|RL3_BURM1 RecName: Full=50S ribosomal protein L3
 gi|160340858|gb|ABX13944.1| ribosomal protein L3 [Burkholderia multivorans ATCC 17616]
 gi|189335820|dbj|BAG44890.1| large subunit ribosomal protein L3 [Burkholderia multivorans ATCC
           17616]
          Length = 216

 Score =  255 bits (653), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 95/212 (44%), Positives = 131/212 (61%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  EG  IPVTV+ + + +V   +T++ +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKVGMTRIFTAEGDSIPVTVVDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP+ G  +   V   + L EFR+       L  G++  P  F VGQ VDV G++IGKG
Sbjct: 61  VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NFG  RA+HG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+
Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             +D +R L+LVKG +PGA K   + V  + K
Sbjct: 181 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVK 211


>gi|326332191|ref|ZP_08198471.1| 50S ribosomal protein L3 [Nocardioidaceae bacterium Broad-1]
 gi|325949897|gb|EGD41957.1| 50S ribosomal protein L3 [Nocardioidaceae bacterium Broad-1]
          Length = 218

 Score =  255 bits (653), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 89/210 (42%), Positives = 123/210 (58%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT +++     +PVTV+  +   V   RT + +GY AVQ+G GE   + V+
Sbjct: 8   KGLLGTKLGMTQLWDENNVVVPVTVIAANTNVVTQVRTPEVDGYNAVQIGYGEIDGRKVN 67

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F     +P++ L E R   D      G   S   F VG+ +DVTG + GKGF+G
Sbjct: 68  KPGAGQFEKAGTTPRRHLAEIR-TADAASYSAGQELSVDTFAVGEEIDVTGTSKGKGFAG 126

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    PGRVFK  +MAG MG + VT +NL V +V
Sbjct: 127 TMKRHGFAGVSASHGAHRNHRKPGSIGACATPGRVFKGVRMAGHMGTDTVTTQNLTVHAV 186

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D ++GLILVKG +PG  K   +++R + K 
Sbjct: 187 DTEKGLILVKGAIPGP-KGGLVVLRSAAKK 215


>gi|169632350|ref|YP_001706086.1| 50S ribosomal protein L3 [Acinetobacter baumannii SDF]
 gi|226725117|sp|B0VQR8|RL3_ACIBS RecName: Full=50S ribosomal protein L3
 gi|169151142|emb|CAO99814.1| 50S ribosomal protein L3 [Acinetobacter baumannii]
          Length = 212

 Score =  255 bits (653), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 98/213 (46%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+ +D  ++   +TL+ +GY AVQV  GE +   
Sbjct: 1   MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFRV + + +   VG       FTVGQ+VDVTG + GKG
Sbjct: 61  VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVTV+ LE+
Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VSVD +R +++VKG +PGA     ++VR + K+
Sbjct: 181 VSVDTERSVLVVKGAIPGATGGD-VIVRPAIKA 212


>gi|311740077|ref|ZP_07713911.1| 50S ribosomal protein L3 [Corynebacterium pseudogenitalium ATCC
           33035]
 gi|311305150|gb|EFQ81219.1| 50S ribosomal protein L3 [Corynebacterium pseudogenitalium ATCC
           33035]
          Length = 218

 Score =  255 bits (653), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 85/214 (39%), Positives = 123/214 (57%), Gaps = 2/214 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +KLGMT V++ + R +PVTV+    C V   RT + +GY A+Q+  GE   +  +
Sbjct: 7   KGILGKKLGMTQVFDEDNRVVPVTVVEAGPCVVTQIRTPETDGYSAIQIAFGEIDPRKAN 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    V+P++ + E R+  D     VG       F     VDVTG T G G++G
Sbjct: 67  KPVGGHFKKAGVTPRRHVAEIRMD-DTSAYEVGQEVKVDIFEGITFVDVTGKTKGHGYAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRH F G  A HG   +HR  G  G    PGRVFK K+MAGRMG +RVT +NL++  +
Sbjct: 126 AMKRHGFAGQGAAHGNQAAHRRVGGIGGAATPGRVFKGKRMAGRMGHDRVTTQNLKIQKI 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           D +  L+L+KG +PGA +   + V+ + K   + 
Sbjct: 186 DAESNLLLIKGAIPGA-RGGLVTVKTAVKGGAHA 218


>gi|313206395|ref|YP_004045572.1| LSU ribosomal protein l3p [Riemerella anatipestifer DSM 15868]
 gi|312445711|gb|ADQ82066.1| LSU ribosomal protein L3P [Riemerella anatipestifer DSM 15868]
 gi|315023664|gb|EFT36668.1| LSU ribosomal protein L3p (L3e) [Riemerella anatipestifer RA-YM]
 gi|325336160|gb|ADZ12434.1| Ribosomal protein L3 [Riemerella anatipestifer RA-GD]
          Length = 207

 Score =  255 bits (653), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 95/206 (46%), Positives = 135/206 (65%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C V+  RT++K+GY+  Q+G  +   KNV 
Sbjct: 2   SGIIGKKIGMTSLFDESGKNIPCTVIQAGPCSVLQVRTVEKDGYVGYQLGFDDKSEKNVG 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K + G F     +PK KL EF      D L VG   +   F+ G+ VDVTG + GKGF G
Sbjct: 62  KALAGHFKKAGSTPKAKLHEFH--HGFDNLQVGDEVTVKLFSEGEYVDVTGTSKGKGFQG 119

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG ++ATHG     R+ GS G   DP RVFK  +MAGRMGG +VTV+NL+V+ 
Sbjct: 120 VVKRHGFGGVMQATHGQHNRLRAPGSIGAGSDPSRVFKGLRMAGRMGGKQVTVQNLQVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           VD+++ L++VKG VPGA KNS++++R
Sbjct: 180 VDEEQNLLVVKGAVPGA-KNSYVIIR 204


>gi|255319815|ref|ZP_05361020.1| 50S ribosomal protein L3 [Acinetobacter radioresistens SK82]
 gi|262380348|ref|ZP_06073502.1| 50S ribosomal protein L3 [Acinetobacter radioresistens SH164]
 gi|255303134|gb|EET82346.1| 50S ribosomal protein L3 [Acinetobacter radioresistens SK82]
 gi|262297794|gb|EEY85709.1| 50S ribosomal protein L3 [Acinetobacter radioresistens SH164]
          Length = 212

 Score =  255 bits (652), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 95/213 (44%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+ +D  ++   +TL+ +GY A+QV  GE +   
Sbjct: 1   MAIGLVGRKCGMTRIFTEAGVSVPVTVIEVDPNRITQIKTLETDGYQAIQVTTGERRESR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFRV + + +   VG+      F VGQ+VDVTG + GKG
Sbjct: 61  VTNGQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGASIGVDLFAVGQIVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVTV+ LE+
Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VS+D +R +++VKG +PGA     ++VR + K+
Sbjct: 181 VSIDAERSVLVVKGAIPGATGGD-VIVRPTIKA 212


>gi|317065030|ref|ZP_07929515.1| LSU ribosomal protein L3P [Fusobacterium ulcerans ATCC 49185]
 gi|313690706|gb|EFS27541.1| LSU ribosomal protein L3P [Fusobacterium ulcerans ATCC 49185]
          Length = 213

 Score =  255 bits (652), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 91/210 (43%), Positives = 134/210 (63%), Gaps = 3/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++A+K+GMT ++  +G+ IPVTV+      V+  +T++ +GY A+Q+G  E K KN +
Sbjct: 7   SGILAKKIGMTQIF-EDGKFIPVTVVEAGPNYVLQKKTVENDGYTALQLGFDEKKEKNTT 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    V+P++ + E RV    +   +G           + VD+TG + GKG +G
Sbjct: 66  KPIMGIFKKAGVNPQRFVKELRVDS-VEGFELGQEIKADVLAEVEYVDITGTSKGKGTAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF G RA+HGVS +HR  GS G    PG+V + KKMAG+ G   VTV+NL+VV V
Sbjct: 125 VMKRHNFAGNRASHGVSRNHRLGGSIGMSSWPGKVLRGKKMAGQYGNATVTVQNLKVVKV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +  L+L+KG VPG+ KNS+I+V+ + K 
Sbjct: 185 DVENNLLLIKGAVPGS-KNSYIVVKPAVKK 213


>gi|220913432|ref|YP_002488741.1| 50S ribosomal protein L3 [Arthrobacter chlorophenolicus A6]
 gi|254803650|sp|B8HD06|RL3_ARTCA RecName: Full=50S ribosomal protein L3
 gi|219860310|gb|ACL40652.1| ribosomal protein L3 [Arthrobacter chlorophenolicus A6]
          Length = 216

 Score =  255 bits (652), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 90/211 (42%), Positives = 124/211 (58%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   + IPVTV+  D+  +   R  + +GY+AVQ+G G+   + V+
Sbjct: 8   KGLLGTKLGMTQVWDENNKLIPVTVVQADSNVITQLRNAEVDGYVAVQIGYGQIDPRKVT 67

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    V+P++ + E R   D     +G   S   F  GQ +DV G T GKGF+G
Sbjct: 68  KPLAGHFEKAGVTPRRHVVELR-TADAAEYELGQELSVELFAAGQKIDVIGTTKGKGFAG 126

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    P RVFK  KMAGRMG  R T  NL V +V
Sbjct: 127 VMKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGMKMAGRMGAVRHTTLNLTVHAV 186

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++ L+L+KG VPGA +   + VR + K A
Sbjct: 187 DAEKSLLLIKGAVPGA-RGQVVFVRTAVKGA 216


>gi|300120599|emb|CBK20153.2| unnamed protein product [Blastocystis hominis]
 gi|300176505|emb|CBK24170.2| unnamed protein product [Blastocystis hominis]
          Length = 250

 Score =  255 bits (652), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 107/207 (51%), Positives = 141/207 (68%), Gaps = 2/207 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GVVA K+GM  +++    RIP TVL ++NCQVV  +T +K    ++QVGAG  KVKNV
Sbjct: 7   RTGVVALKIGMMPLWDKWCTRIPCTVLQIENCQVVQVKTKEKENTNSLQVGAGPVKVKNV 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G + SV V PK+ L EF+V +D   LPVG+  +  +F  GQ V++ G+T GKGF 
Sbjct: 67  NKPLFGHYKSVGVEPKRYLTEFKVTED-AFLPVGTELTCKHFVPGQRVNIQGITQGKGFQ 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G M+R  F GL A+HGVS+SHRS GSTG R+DPG+ FK KKM GRMG    TV+NL V  
Sbjct: 126 GVMRRWGFKGLGASHGVSVSHRSLGSTGQREDPGKTFKGKKMPGRMGNKNCTVQNLLVYK 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRD 208
           +D KR L+ VKGCVPG     ++ + D
Sbjct: 186 IDPKRNLVYVKGCVPG-NDGEYVKITD 211


>gi|320582593|gb|EFW96810.1| Mitochondrial ribosomal protein of the large subunit [Pichia
           angusta DL-1]
          Length = 272

 Score =  255 bits (652), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 108/211 (51%), Positives = 140/211 (66%), Gaps = 2/211 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  K GMT  Y+  G R+P TVL +D  +VV ++T+DKNGY AVQVG G  K+KN 
Sbjct: 55  RPGLIGVKRGMTQFYSRNGDRVPATVLEIDQVEVVYNKTVDKNGYYAVQVGYGH-KLKNQ 113

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +K M G + +  VSPK+ LFEF V+ ++ L+PVGS     +F  GQ VDV   T GKGFS
Sbjct: 114 TKAMLGHYRNAKVSPKETLFEFEVKDENGLVPVGSQLKADHFKPGQFVDVISKTKGKGFS 173

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR NF GL ATHG S++HRS GSTG    P RV   KKMAG +G    T+ NLEV+ 
Sbjct: 174 GVMKRWNFSGLPATHGTSLAHRSAGSTGMNTTPARVLPGKKMAGHLGDEWNTIFNLEVLD 233

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V+ ++G ILVKGCV G+   S++ +RD+ K 
Sbjct: 234 VNAEKGYILVKGCVSGSN-GSYVQIRDALKK 263


>gi|255324736|ref|ZP_05365850.1| 50S ribosomal protein L3 [Corynebacterium tuberculostearicum SK141]
 gi|255298211|gb|EET77514.1| 50S ribosomal protein L3 [Corynebacterium tuberculostearicum SK141]
          Length = 218

 Score =  255 bits (652), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 85/214 (39%), Positives = 123/214 (57%), Gaps = 2/214 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +KLGMT V++ + R +PVTV+    C V   RT + +GY A+Q+  GE   +  +
Sbjct: 7   KGILGKKLGMTQVFDEDNRVVPVTVVEAGPCVVTQIRTPETDGYSAIQIAFGEIDPRKAN 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    V+P++ + E R+  D     VG       F     VDVTG T G G++G
Sbjct: 67  KPVGGHFKKAGVTPRRHVAEIRMD-DTSAYEVGQEVKVDIFEGTTFVDVTGKTKGHGYAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRH F G  A HG   +HR  G  G    PGRVFK K+MAGRMG +RVT +NL++  +
Sbjct: 126 AMKRHGFAGQGAAHGNQAAHRRVGGIGGAATPGRVFKGKRMAGRMGHDRVTTQNLKIQKI 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           D +  L+L+KG +PGA +   + V+ + K   + 
Sbjct: 186 DAESNLLLIKGAIPGA-RGGLVTVKTAVKGGAHA 218


>gi|296392585|ref|YP_003657469.1| 50S ribosomal protein L3 [Segniliparus rotundus DSM 44985]
 gi|296179732|gb|ADG96638.1| 50S ribosomal protein L3 [Segniliparus rotundus DSM 44985]
          Length = 221

 Score =  255 bits (652), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 89/213 (41%), Positives = 123/213 (57%), Gaps = 2/213 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   R +PVTV+      V   RT +++ Y A+Q+  G    + V
Sbjct: 9   RVGLLGAKLGMTQVFDERNRVVPVTVIRTGVNVVTQVRTPERDKYSAIQLAFGHIDPRKV 68

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G F    V+P++ L EFR+  D     VG     + F+ G LVDVTG + GKGF+
Sbjct: 69  NKPLAGQFEKAGVTPRRHLAEFRLD-DVSGYEVGQQIDATVFSAGDLVDVTGTSKGKGFA 127

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F G  A+HG    HR  GS G    PGRVFK  +MAGRMG  + T +NL V  
Sbjct: 128 GTMKRHGFKGQGASHGAHKVHRRPGSIGACAFPGRVFKGTRMAGRMGNAKTTTQNLTVFR 187

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           VD + G++L+KG VPG +    + +R + K  V
Sbjct: 188 VDPEAGVLLIKGAVPG-RDGGLVFIRSAVKKGV 219


>gi|257054470|ref|YP_003132302.1| 50S ribosomal protein L3P [Saccharomonospora viridis DSM 43017]
 gi|256584342|gb|ACU95475.1| LSU ribosomal protein L3P [Saccharomonospora viridis DSM 43017]
          Length = 213

 Score =  255 bits (652), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 92/212 (43%), Positives = 123/212 (58%), Gaps = 2/212 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   R +PVTV+      V   R+ +K+GY AVQ+  G    + V+
Sbjct: 2   KGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQVRSKEKDGYSAVQLAFGNIDPRRVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P++ L E R   D D   VG   +   F+ G +VDVTG + GKGF+G
Sbjct: 62  KPQAGHFEKAGVTPRRYLAELRTS-DADSYEVGQEITADVFSDGAVVDVTGTSKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G  A+HG   +HR+ GS G    PGRVFK K+MAGR G  RVT + L + SV
Sbjct: 121 VMKRHGFAGQGASHGNQATHRAPGSIGGAATPGRVFKGKRMAGRAGNKRVTTQGLTIHSV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
             + GL+L+KG VPG  K   + VR + K  V
Sbjct: 181 RAEEGLLLIKGAVPGP-KGGLVFVRSAAKGGV 211


>gi|309379159|emb|CBX22290.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 214

 Score =  255 bits (652), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 103/212 (48%), Positives = 132/212 (62%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDD-LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V       EF + ++    L  G   + S F VGQLVDVTG + GKG
Sbjct: 61  VNKAEAGHFAKAGVEGGSGSIEFALTEEKPVELKAGDEITVSMFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGTTKATVQKLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+LVKG VPGA  NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGAV-NSDVVVRPSVK 211


>gi|260549840|ref|ZP_05824056.1| 50S ribosomal protein L3 [Acinetobacter sp. RUH2624]
 gi|260407090|gb|EEX00567.1| 50S ribosomal protein L3 [Acinetobacter sp. RUH2624]
          Length = 214

 Score =  255 bits (652), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 97/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+ +D  ++   +TL+ +GY AVQV  GE +   
Sbjct: 3   MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 62

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFRV + + +   VG       FTVGQ+VDVTG + GKG
Sbjct: 63  VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVTV+ LE+
Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VS+D +R +++VKG +PGA     ++VR + K+
Sbjct: 183 VSIDAERSVLVVKGAIPGATGGD-VIVRPTIKA 214


>gi|313895368|ref|ZP_07828925.1| 50S ribosomal protein L3 [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|312976263|gb|EFR41721.1| 50S ribosomal protein L3 [Selenomonas sp. oral taxon 137 str.
           F0430]
          Length = 217

 Score =  255 bits (652), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 98/219 (44%), Positives = 131/219 (59%), Gaps = 5/219 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ RKLGMT ++  EGR +PVTV+   N  V+ ++T + +GY AVQ+G G+ K KN
Sbjct: 1   MAKAILGRKLGMTQIFTEEGRVVPVTVVESGNNLVLRNKTNETDGYNAVQIGFGDVKEKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F    V   + + E R+    +   VG       F  G LVDV G + GKGF
Sbjct: 61  VTKPLKGQFEKAGVKAVRFIREMRLSAPSE-YNVGDTIGVDIFAEGDLVDVVGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KRHNF      HG S SHR  GSTG       GRV K KK+ GRMGG RVTV+ L 
Sbjct: 120 AGGIKRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLT 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           VV VD  R LIL+KG +PG KK  +++++D+ K A   K
Sbjct: 179 VVRVDTDRNLILIKGAIPGPKKG-FVVIKDTVKPAKAAK 216


>gi|253577179|ref|ZP_04854499.1| 50S ribosomal protein L3 [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251843423|gb|EES71451.1| 50S ribosomal protein L3 [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 207

 Score =  255 bits (652), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 83/210 (39%), Positives = 115/210 (54%), Gaps = 4/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +KLGMT V+  EG  IPVTV+   +  V+  + L+ +GY A+Q+G  + K    +
Sbjct: 2   KGILGKKLGMTQVFTPEGNVIPVTVIEASSNVVLQKKDLENDGYEAIQLGYSDKKEARAN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G       +PK+ + E R   D     VG       F  G+ VDVTG++ GKGF G
Sbjct: 62  KPEVGHAKKAGTTPKRYVREIRGV-DLAGYEVGQEVKVDIFAEGEFVDVTGISKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR         HG S  HR  GS G      RVFK K + G MG   VT++NLEVV V
Sbjct: 121 VIKRWGQSRGPMAHG-SRYHRRPGSMGSIA-ANRVFKGKNLPGHMGHETVTIQNLEVVKV 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R ++LVKG +PG  KNS++ V+ + K 
Sbjct: 179 DAERNVLLVKGSIPGP-KNSFVKVKQTTKK 207


>gi|19551746|ref|NP_599748.1| 50S ribosomal protein L3 [Corynebacterium glutamicum ATCC 13032]
 gi|62389401|ref|YP_224803.1| 50S ribosomal protein L3 [Corynebacterium glutamicum ATCC 13032]
 gi|145294657|ref|YP_001137478.1| 50S ribosomal protein L3 [Corynebacterium glutamicum R]
 gi|42559652|sp|Q8NT09|RL3_CORGL RecName: Full=50S ribosomal protein L3
 gi|166233137|sp|A4QBH9|RL3_CORGB RecName: Full=50S ribosomal protein L3
 gi|21323271|dbj|BAB97899.1| Ribosomal protein L3 [Corynebacterium glutamicum ATCC 13032]
 gi|41324735|emb|CAF19217.1| 50S RIBOSOMAL PROTEIN L3 [Corynebacterium glutamicum ATCC 13032]
 gi|140844577|dbj|BAF53576.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 218

 Score =  255 bits (652), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 86/214 (40%), Positives = 125/214 (58%), Gaps = 2/214 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT +++ E R IPVTV+    C V   RT++ +GY A+Q+  GE   + V+
Sbjct: 7   KGILGTKLGMTQIFDEENRVIPVTVVEAGPCVVSQIRTVETDGYNAIQIAYGEIDPRKVN 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +P+ G F    V+P++ + E R+  D     VG   +   F   + VDVTG T GKG++G
Sbjct: 67  QPLTGHFKKAGVTPRRHVTEIRMD-DVSGYEVGQDVTVEIFNDIKFVDVTGTTKGKGYAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRH F G  A HG   +HR  G  G    PGR+FK K+MAGRMG +RVT +NL+V  +
Sbjct: 126 AMKRHGFAGQGAGHGNQAAHRRVGGIGAAATPGRIFKGKRMAGRMGNDRVTTQNLKVQKI 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           D    +IL+KG +PG  +   + V+ + K   + 
Sbjct: 186 DADANIILIKGAIPG-NRGGIVTVKTAVKGGAHA 218


>gi|184200262|ref|YP_001854469.1| 50S ribosomal protein L3 [Kocuria rhizophila DC2201]
 gi|212288402|sp|B2GIL4|RL3_KOCRD RecName: Full=50S ribosomal protein L3
 gi|183580492|dbj|BAG28963.1| 50S ribosomal protein L3 [Kocuria rhizophila DC2201]
          Length = 218

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 92/211 (43%), Positives = 124/211 (58%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++  G+ +PVTV+  D+  V   R  DK+GY AVQ+G G    + V+
Sbjct: 10  KGLLGTKLGMTQVWDENGKFVPVTVVKADSNVVTQLRNTDKDGYNAVQIGFGAIDPRKVT 69

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F++  V+P++ + E R   D     +G   S   F  G  VDV G T GKG +G
Sbjct: 70  KPLAGHFAAAGVTPRRHVVELRTS-DAAEYELGQELSVELFEAGAKVDVVGTTKGKGTAG 128

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    P RVFK  +MAGRMG  R T  NL V +V
Sbjct: 129 VMKRHGFSGVGASHGAHKNHRKPGSIGGASYPARVFKGMRMAGRMGNARHTTMNLTVHAV 188

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D +  L+L+KG +PG  K S +LVR + K A
Sbjct: 189 DAENSLLLIKGALPGP-KGSVVLVRSTVKGA 218


>gi|257463961|ref|ZP_05628346.1| 50S ribosomal protein L3P [Fusobacterium sp. D12]
 gi|317061484|ref|ZP_07925969.1| LSU ribosomal protein L3P [Fusobacterium sp. D12]
 gi|313687160|gb|EFS23995.1| LSU ribosomal protein L3P [Fusobacterium sp. D12]
          Length = 208

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 90/210 (42%), Positives = 132/210 (62%), Gaps = 3/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++A+K+GMT ++  +G+ +PVTV+      V+  +T + +GY A+Q+G  E K KN +
Sbjct: 2   SGILAKKIGMTQIF-EDGKFVPVTVVEAGPNYVLQKKTEETDGYTALQLGFDEKKEKNTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   V P++ + E +V    +   +G       F+  + VD+TG + GKG SG
Sbjct: 61  KPLMGIFNKAGVKPQRFVRELKVDS-VEGYELGQEIKVDVFSEVEYVDITGTSKGKGTSG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGG RATHGVS +HR  GS G    PG+V K  +MAGR G   VTV+NL+VV V
Sbjct: 120 VMKRHGFGGNRATHGVSRNHRLGGSIGQSSWPGKVLKGLRMAGRHGNATVTVQNLKVVRV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D    L+L+KG VPGA KN +++++ + K 
Sbjct: 180 DADNNLLLIKGAVPGA-KNGYLVIKPAIKK 208


>gi|119511179|ref|ZP_01630296.1| 50S ribosomal protein L3 [Nodularia spumigena CCY9414]
 gi|119464167|gb|EAW45087.1| 50S ribosomal protein L3 [Nodularia spumigena CCY9414]
          Length = 211

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 85/211 (40%), Positives = 124/211 (58%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT V++  G  IPVTV+    C V   +T   +GY A+Q+G GE K K 
Sbjct: 1   MSVGILGTKLGMTQVFDEAGVSIPVTVVQAGPCTVTQVKTKQTDGYSAIQLGYGEVKPKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P+ G  +  +    + L E+      D   +G       F+ GQ+VDV G +IG+GF
Sbjct: 61  LNRPLLGHLAKSSAPALRHLNEYHTDSPSD-YALGQELKADIFSEGQIVDVVGTSIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KR+NFG    +HG S +HR+ GS G    PGRV+  K+MAGR+GG RVT++ L VV
Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGTRVTIRKLTVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L+L+KG +PG    S + +  + K
Sbjct: 179 RVDLERNLLLIKGAIPGKP-GSLVNILPAKK 208


>gi|302336382|ref|YP_003801589.1| LSU ribosomal protein L3P [Olsenella uli DSM 7084]
 gi|301320222|gb|ADK68709.1| LSU ribosomal protein L3P [Olsenella uli DSM 7084]
          Length = 206

 Score =  255 bits (651), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 91/209 (43%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M S ++ RK+GMT V++ +   +PVTV+    C V   +T   +GY AVQ+G G+   K+
Sbjct: 1   MVSTILGRKIGMTQVWDEDDNVVPVTVIQAGPCTVSQVKTKATDGYDAVQIGFGDITAKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM G F+   V P + L E RV +D +    G   S + F   + VDVTG + GKGF
Sbjct: 61  VNKPMAGHFAKAGVEPMRYLREVRV-EDGEEHSCGDQVSVADFAEVKSVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF     THG S + R  GS G    P RV K   MAG MG  RVTVKNL++V
Sbjct: 120 QGTIKRWNFSRGPMTHG-SRNQRKPGSIGQCAYPARVRKGLHMAGHMGDERVTVKNLKLV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            VD ++ L+LVKG VPG  KN+ + +R +
Sbjct: 179 RVDVEQNLMLVKGAVPGG-KNALVSIRMA 206


>gi|163840906|ref|YP_001625311.1| 50S ribosomal protein L3 [Renibacterium salmoninarum ATCC 33209]
 gi|189029475|sp|A9WSV9|RL3_RENSM RecName: Full=50S ribosomal protein L3
 gi|162954382|gb|ABY23897.1| LSU ribosomal protein L3P [Renibacterium salmoninarum ATCC 33209]
          Length = 220

 Score =  255 bits (651), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 92/213 (43%), Positives = 127/213 (59%), Gaps = 2/213 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   + +PVTV+  D+  V   R   K+GY AVQ+G G+   + V+
Sbjct: 8   KGILGTKLGMTQVWDENNKLVPVTVVQADSNVVTQLRDAAKDGYTAVQIGYGQIDPRKVT 67

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    V+P++ + E R   D D   +G   S   F  GQ VDV G + GKGF+G
Sbjct: 68  KPLAGHFEKAGVTPRRHVVELR-TNDSDAYSLGQELSVEIFEAGQKVDVVGTSKGKGFAG 126

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    P RVFK  KMAGRMGG R T  NL V ++
Sbjct: 127 VMKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGLKMAGRMGGERHTTLNLTVHAI 186

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           D ++ L+L+KG +PGA +   +LVR + K+ V 
Sbjct: 187 DAEKSLLLIKGAIPGA-RGRVVLVRTAVKTTVK 218


>gi|124268627|ref|YP_001022631.1| 50S ribosomal protein L3 [Methylibium petroleiphilum PM1]
 gi|124261402|gb|ABM96396.1| LSU ribosomal protein L3P [Methylibium petroleiphilum PM1]
          Length = 247

 Score =  255 bits (651), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 92/215 (42%), Positives = 124/215 (57%), Gaps = 2/215 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ RK+GM  ++  +G  +PVTVL + N +V   +T++ +GY A+QV  G  K   V
Sbjct: 30  RLGLLGRKVGMMRIFTDDGDAVPVTVLDVSNNRVTQVKTVETDGYSAIQVTFGARKASRV 89

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +KP  G  +   V   + L EF V  +       G       F  GQ VDV G +IGKGF
Sbjct: 90  TKPEAGHLAKAGVEAGEILREFAVSAEVAAEYKPGGTLPVGLFAAGQKVDVQGTSIGKGF 149

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNFG  RA+HG S SH   GS    QDPGRVF  KKM+G  G    T +NL++V
Sbjct: 150 TGTIKRHNFGSQRASHGNSRSHNVPGSISMAQDPGRVFPGKKMSGHRGDVTKTTQNLDIV 209

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            VD+ R L+LV+G VPGA KN ++ VR + K    
Sbjct: 210 RVDEARQLLLVRGAVPGA-KNGFVTVRPAVKVKAK 243


>gi|302773854|ref|XP_002970344.1| hypothetical protein SELMODRAFT_267426 [Selaginella moellendorffii]
 gi|300161860|gb|EFJ28474.1| hypothetical protein SELMODRAFT_267426 [Selaginella moellendorffii]
          Length = 279

 Score =  255 bits (651), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 110/212 (51%), Positives = 147/212 (69%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K GMT V++  GRRIP+TVL  D+ QVV  +T+D  G+ A+QVG G+ K K +
Sbjct: 28  RTGLIAVKCGMTAVWDKWGRRIPITVLWADDNQVVQVKTVDHEGFNALQVGCGQKKPKQL 87

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           S P  G F S  V  K+KL EF+V +D  LLPVG+  +  +F  GQ +DVTG++IGKGF 
Sbjct: 88  SIPELGHFRSKGVPIKRKLKEFQVSED-ALLPVGTPLTVRHFVPGQFLDVTGVSIGKGFQ 146

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR  F G+ A+HG S+SHRSHG+TG R+ PG+VFKNKKMAG+MG  + TV  + V  
Sbjct: 147 GPMKRWGFAGMPASHGASLSHRSHGATGGRKSPGKVFKNKKMAGQMGNRKATVFCVWVYK 206

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V+ +R LI VKG VPG K N ++ +RDS+   
Sbjct: 207 VEPQRDLIWVKGQVPGCKGN-FVYIRDSWNKP 237


>gi|261338279|ref|ZP_05966163.1| 50S ribosomal protein L3 [Bifidobacterium gallicum DSM 20093]
 gi|270276934|gb|EFA22788.1| 50S ribosomal protein L3 [Bifidobacterium gallicum DSM 20093]
          Length = 216

 Score =  255 bits (651), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 86/212 (40%), Positives = 123/212 (58%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+ ++ +KLGM+ V++  G  IPVT++ +    V   +T + +GY AVQ+G G+A    +
Sbjct: 7   RTALLGKKLGMSQVWDENGFFIPVTLIDVSTNVVTAVKTEETDGYNAVQLGYGQADPTKI 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KPM G F+   V+P++ L E R +   +  P G   +   F  G  VDVTG T GKGF+
Sbjct: 67  TKPMAGHFAKAGVTPRRHLAEVRTENVAEFEP-GQELTAELFPEGVQVDVTGTTKGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F   R THG   + R  GS G    P R+ K K+MAGRMG +  TV NL ++S
Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHDTNTVLNLTIMS 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D + G+I VKG +PG  K   +LVR + K A
Sbjct: 186 SDVENGIIAVKGAIPGP-KGGIVLVRSAVKGA 216


>gi|146317731|ref|YP_001197443.1| 50S ribosomal protein L3 [Streptococcus suis 05ZYH33]
 gi|253750987|ref|YP_003024128.1| 50S ribosomal protein L3 [Streptococcus suis SC84]
 gi|253752887|ref|YP_003026027.1| 50S ribosomal protein L3 [Streptococcus suis P1/7]
 gi|253754712|ref|YP_003027852.1| 50S ribosomal protein L3 [Streptococcus suis BM407]
 gi|330831920|ref|YP_004400745.1| 50S ribosomal protein L3 [Streptococcus suis ST3]
 gi|166234601|sp|A4VSF4|RL3_STRSY RecName: Full=50S ribosomal protein L3
 gi|145688537|gb|ABP89043.1| Ribosomal protein L3 [Streptococcus suis 05ZYH33]
 gi|251815276|emb|CAZ50842.1| 50S ribosomal protein L3 [Streptococcus suis SC84]
 gi|251817176|emb|CAZ54898.1| 50S ribosomal protein L3 [Streptococcus suis BM407]
 gi|251819132|emb|CAR44223.1| 50S ribosomal protein L3 [Streptococcus suis P1/7]
 gi|292557531|gb|ADE30532.1| ribosomal protein L3 [Streptococcus suis GZ1]
 gi|319757241|gb|ADV69183.1| 50S ribosomal protein L3 [Streptococcus suis JS14]
 gi|329306143|gb|AEB80559.1| 50S ribosomal protein L3 [Streptococcus suis ST3]
          Length = 208

 Score =  255 bits (651), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 91/213 (42%), Positives = 128/213 (60%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYAAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG   +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGQEITVETFAAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFK K +AGRMGGNRVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGNRVTIQNLEVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+ 
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAG 207


>gi|15900145|ref|NP_344749.1| 50S ribosomal protein L3 [Streptococcus pneumoniae TIGR4]
 gi|15902232|ref|NP_357782.1| 50S ribosomal protein L3 [Streptococcus pneumoniae R6]
 gi|111658801|ref|ZP_01409432.1| hypothetical protein SpneT_02000098 [Streptococcus pneumoniae
           TIGR4]
 gi|116516725|ref|YP_815712.1| 50S ribosomal protein L3 [Streptococcus pneumoniae D39]
 gi|148983607|ref|ZP_01816926.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP3-BS71]
 gi|148987945|ref|ZP_01819408.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP6-BS73]
 gi|148992785|ref|ZP_01822428.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP9-BS68]
 gi|148996630|ref|ZP_01824348.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP11-BS70]
 gi|149001686|ref|ZP_01826659.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP14-BS69]
 gi|149005958|ref|ZP_01829687.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP18-BS74]
 gi|149011077|ref|ZP_01832382.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP19-BS75]
 gi|149017897|ref|ZP_01834356.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP23-BS72]
 gi|168483845|ref|ZP_02708797.1| ribosomal protein L3 [Streptococcus pneumoniae CDC1873-00]
 gi|168486024|ref|ZP_02710532.1| ribosomal protein L3 [Streptococcus pneumoniae CDC1087-00]
 gi|168489686|ref|ZP_02713885.1| ribosomal protein L3 [Streptococcus pneumoniae SP195]
 gi|168492162|ref|ZP_02716305.1| ribosomal protein L3 [Streptococcus pneumoniae CDC0288-04]
 gi|168493902|ref|ZP_02718045.1| ribosomal protein L3 [Streptococcus pneumoniae CDC3059-06]
 gi|168576364|ref|ZP_02722247.1| ribosomal protein L3 [Streptococcus pneumoniae MLV-016]
 gi|169833378|ref|YP_001693741.1| 50S ribosomal protein L3 [Streptococcus pneumoniae Hungary19A-6]
 gi|182683188|ref|YP_001834935.1| 50S ribosomal protein L3 [Streptococcus pneumoniae CGSP14]
 gi|194397396|ref|YP_002036910.1| 50S ribosomal protein L3 [Streptococcus pneumoniae G54]
 gi|221231113|ref|YP_002510265.1| 50S ribosomal protein L3 [Streptococcus pneumoniae ATCC 700669]
 gi|225853815|ref|YP_002735327.1| 50S ribosomal protein L3 [Streptococcus pneumoniae JJA]
 gi|225855974|ref|YP_002737485.1| 50S ribosomal protein L3 [Streptococcus pneumoniae P1031]
 gi|225858063|ref|YP_002739573.1| 50S ribosomal protein L3 [Streptococcus pneumoniae 70585]
 gi|225860251|ref|YP_002741760.1| 50S ribosomal protein L3 [Streptococcus pneumoniae Taiwan19F-14]
 gi|237649723|ref|ZP_04523975.1| 50S ribosomal protein L3 [Streptococcus pneumoniae CCRI 1974]
 gi|237821421|ref|ZP_04597266.1| 50S ribosomal protein L3 [Streptococcus pneumoniae CCRI 1974M2]
 gi|270292000|ref|ZP_06198215.1| ribosomal protein L3 [Streptococcus sp. M143]
 gi|289168732|ref|YP_003447001.1| 50S ribosomal protein L3 [Streptococcus mitis B6]
 gi|293364347|ref|ZP_06611073.1| 50S ribosomal protein L3 [Streptococcus oralis ATCC 35037]
 gi|298230366|ref|ZP_06964047.1| 50S ribosomal protein L3 [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298255987|ref|ZP_06979573.1| 50S ribosomal protein L3 [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298502023|ref|YP_003723963.1| 50S ribosomal protein L3 [Streptococcus pneumoniae TCH8431/19A]
 gi|303255095|ref|ZP_07341171.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS455]
 gi|303259261|ref|ZP_07345239.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP-BS293]
 gi|303261016|ref|ZP_07346965.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP14-BS292]
 gi|303263344|ref|ZP_07349267.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS397]
 gi|303265509|ref|ZP_07351409.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS457]
 gi|303267933|ref|ZP_07353735.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS458]
 gi|306825986|ref|ZP_07459322.1| 50S ribosomal protein L3 [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|306828783|ref|ZP_07461975.1| 50S ribosomal protein L3 [Streptococcus mitis ATCC 6249]
 gi|307066886|ref|YP_003875852.1| hypothetical protein SPAP_0257 [Streptococcus pneumoniae AP200]
 gi|307126429|ref|YP_003878460.1| 50S ribosomal protein L3 [Streptococcus pneumoniae 670-6B]
 gi|307702686|ref|ZP_07639638.1| 50S ribosomal protein L3 (BL3) [Streptococcus oralis ATCC 35037]
 gi|307704065|ref|ZP_07640994.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK597]
 gi|307709910|ref|ZP_07646357.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK564]
 gi|307711054|ref|ZP_07647476.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK321]
 gi|315612332|ref|ZP_07887245.1| 50S ribosomal protein L3 [Streptococcus sanguinis ATCC 49296]
 gi|322375039|ref|ZP_08049553.1| 50S ribosomal protein L3 [Streptococcus sp. C300]
 gi|322377230|ref|ZP_08051722.1| 50S ribosomal protein L3 [Streptococcus sp. M334]
 gi|322391199|ref|ZP_08064671.1| 50S ribosomal protein L3 [Streptococcus peroris ATCC 700780]
 gi|331267136|ref|YP_004326766.1| 50S ribosomal protein L3 [Streptococcus oralis Uo5]
 gi|42559631|sp|Q8CWV8|RL3_STRR6 RecName: Full=50S ribosomal protein L3
 gi|42559682|sp|Q97SV5|RL3_STRPN RecName: Full=50S ribosomal protein L3
 gi|122279402|sp|Q04MN6|RL3_STRP2 RecName: Full=50S ribosomal protein L3
 gi|226730574|sp|B5E6F5|RL3_STRP4 RecName: Full=50S ribosomal protein L3
 gi|226730575|sp|B1I8J8|RL3_STRPI RecName: Full=50S ribosomal protein L3
 gi|226730576|sp|B2IS40|RL3_STRPS RecName: Full=50S ribosomal protein L3
 gi|254803693|sp|C1CAL2|RL3_STRP7 RecName: Full=50S ribosomal protein L3
 gi|254803694|sp|B8ZKF7|RL3_STRPJ RecName: Full=50S ribosomal protein L3
 gi|254803696|sp|C1CC06|RL3_STRZJ RecName: Full=50S ribosomal protein L3
 gi|254803697|sp|C1CI97|RL3_STRZP RecName: Full=50S ribosomal protein L3
 gi|254803698|sp|C1CP88|RL3_STRZT RecName: Full=50S ribosomal protein L3
 gi|14971677|gb|AAK74389.1| ribosomal protein L3 [Streptococcus pneumoniae TIGR4]
 gi|15457732|gb|AAK98992.1| 50S Ribosomal protein L3 [Streptococcus pneumoniae R6]
 gi|116077301|gb|ABJ55021.1| ribosomal protein L3 [Streptococcus pneumoniae D39]
 gi|147757205|gb|EDK64244.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP11-BS70]
 gi|147760144|gb|EDK67133.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP14-BS69]
 gi|147762314|gb|EDK69275.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP18-BS74]
 gi|147764713|gb|EDK71643.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP19-BS75]
 gi|147923754|gb|EDK74866.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP3-BS71]
 gi|147926409|gb|EDK77482.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP6-BS73]
 gi|147928511|gb|EDK79526.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP9-BS68]
 gi|147931461|gb|EDK82439.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP23-BS72]
 gi|168995880|gb|ACA36492.1| ribosomal protein L3 [Streptococcus pneumoniae Hungary19A-6]
 gi|172042867|gb|EDT50913.1| ribosomal protein L3 [Streptococcus pneumoniae CDC1873-00]
 gi|182628522|gb|ACB89470.1| 50S ribosomal protein L3 [Streptococcus pneumoniae CGSP14]
 gi|183570883|gb|EDT91411.1| ribosomal protein L3 [Streptococcus pneumoniae CDC1087-00]
 gi|183571866|gb|EDT92394.1| ribosomal protein L3 [Streptococcus pneumoniae SP195]
 gi|183573583|gb|EDT94111.1| ribosomal protein L3 [Streptococcus pneumoniae CDC0288-04]
 gi|183576220|gb|EDT96748.1| ribosomal protein L3 [Streptococcus pneumoniae CDC3059-06]
 gi|183577906|gb|EDT98434.1| ribosomal protein L3 [Streptococcus pneumoniae MLV-016]
 gi|194357063|gb|ACF55511.1| 50S ribosomal protein L3 [Streptococcus pneumoniae G54]
 gi|220673573|emb|CAR68059.1| 50S ribosomal protein L3 [Streptococcus pneumoniae ATCC 700669]
 gi|225720422|gb|ACO16276.1| ribosomal protein L3 [Streptococcus pneumoniae 70585]
 gi|225722972|gb|ACO18825.1| ribosomal protein L3 [Streptococcus pneumoniae JJA]
 gi|225725081|gb|ACO20933.1| ribosomal protein L3 [Streptococcus pneumoniae P1031]
 gi|225726716|gb|ACO22567.1| ribosomal protein L3 [Streptococcus pneumoniae Taiwan19F-14]
 gi|270279528|gb|EFA25370.1| ribosomal protein L3 [Streptococcus sp. M143]
 gi|288908299|emb|CBJ23141.1| 50S ribosomal protein L3 [Streptococcus mitis B6]
 gi|291317193|gb|EFE57620.1| 50S ribosomal protein L3 [Streptococcus oralis ATCC 35037]
 gi|298237618|gb|ADI68749.1| 50S ribosomal protein L3 [Streptococcus pneumoniae TCH8431/19A]
 gi|301793482|emb|CBW35855.1| 50S ribosomal protein L3 [Streptococcus pneumoniae INV104]
 gi|301799358|emb|CBW31893.1| 50S ribosomal protein L3 [Streptococcus pneumoniae OXC141]
 gi|301801153|emb|CBW33826.1| 50S ribosomal protein L3 [Streptococcus pneumoniae INV200]
 gi|302597925|gb|EFL64995.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS455]
 gi|302637853|gb|EFL68339.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP14-BS292]
 gi|302639679|gb|EFL70136.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP-BS293]
 gi|302642629|gb|EFL72974.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS458]
 gi|302644949|gb|EFL75196.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS457]
 gi|302647117|gb|EFL77341.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS397]
 gi|304428961|gb|EFM32049.1| 50S ribosomal protein L3 [Streptococcus mitis ATCC 6249]
 gi|304431702|gb|EFM34682.1| 50S ribosomal protein L3 [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|306408423|gb|ADM83850.1| hypothetical protein SPAP_0257 [Streptococcus pneumoniae AP200]
 gi|306483491|gb|ADM90360.1| ribosomal protein L3 [Streptococcus pneumoniae 670-6B]
 gi|307617016|gb|EFN96194.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK321]
 gi|307619281|gb|EFN98410.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK564]
 gi|307622355|gb|EFO01363.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK597]
 gi|307623802|gb|EFO02787.1| 50S ribosomal protein L3 (BL3) [Streptococcus oralis ATCC 35037]
 gi|315315313|gb|EFU63352.1| 50S ribosomal protein L3 [Streptococcus sanguinis ATCC 49296]
 gi|321145952|gb|EFX41341.1| 50S ribosomal protein L3 [Streptococcus peroris ATCC 700780]
 gi|321280539|gb|EFX57578.1| 50S ribosomal protein L3 [Streptococcus sp. C300]
 gi|321281943|gb|EFX58951.1| 50S ribosomal protein L3 [Streptococcus sp. M334]
 gi|326683808|emb|CBZ01426.1| 50S ribosomal protein L3 [Streptococcus oralis Uo5]
 gi|327390628|gb|EGE88968.1| 50S ribosomal protein L3 [Streptococcus pneumoniae GA04375]
 gi|332075874|gb|EGI86341.1| 50S ribosomal protein L3 [Streptococcus pneumoniae GA17570]
 gi|332076655|gb|EGI87117.1| 50S ribosomal protein L3 [Streptococcus pneumoniae GA17545]
 gi|332077510|gb|EGI87971.1| 50S ribosomal protein L3 [Streptococcus pneumoniae GA41301]
          Length = 208

 Score =  255 bits (651), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 89/213 (41%), Positives = 129/213 (60%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY A+QVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNVEGLEVGAEITVETFAAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFK K +AGRMGG+RVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+ 
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAG 207


>gi|242278658|ref|YP_002990787.1| ribosomal protein L3 [Desulfovibrio salexigens DSM 2638]
 gi|259647407|sp|C6C185|RL3_DESAD RecName: Full=50S ribosomal protein L3
 gi|242121552|gb|ACS79248.1| ribosomal protein L3 [Desulfovibrio salexigens DSM 2638]
          Length = 210

 Score =  255 bits (651), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 87/208 (41%), Positives = 120/208 (57%), Gaps = 2/208 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
             G++ +KLGMT V+  +G  +PVTVL +  C V+  +T +K GY A+Q+G      + V
Sbjct: 4   TIGLLGKKLGMTRVFADDGSVVPVTVLEVGPCPVMQVKTEEKEGYNAIQIGYDALPERKV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP +G          + L EF ++   D   +G   S   F  G+ V VTG + GKGF 
Sbjct: 64  NKPAKGHQEKAGKGYFRHLREFPLESVAD-YELGQEISVDIFAAGEKVKVTGTSKGKGFQ 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR NF G RA+HG    HRS GS G    PG+VFK KKM G+MG  RVTV N+E+V 
Sbjct: 123 GVMKRWNFAGSRASHGAEKVHRSPGSIGHATFPGKVFKGKKMPGQMGNERVTVSNIEIVD 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
           V     +++VKG VPG  KN  +++R +
Sbjct: 183 VRADENVLVVKGQVPGP-KNGLVMIRKT 209


>gi|167771267|ref|ZP_02443320.1| hypothetical protein ANACOL_02625 [Anaerotruncus colihominis DSM
           17241]
 gi|167666518|gb|EDS10648.1| hypothetical protein ANACOL_02625 [Anaerotruncus colihominis DSM
           17241]
          Length = 210

 Score =  255 bits (651), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 86/212 (40%), Positives = 125/212 (58%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  +V +K+GMT +++  G+ IPVTV+    C VV  +T + +GY AVQ+G G+   K 
Sbjct: 1   MQKCIVGKKIGMTQLFDESGKMIPVTVVEAGPCVVVQKKTTENDGYEAVQLGFGDISEKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F+   V+ K+ L EFR+  D   L VG +     F VG  VDV G++ GKG+
Sbjct: 61  VNKPLKGHFAKAGVALKRVLREFRLD-DCSALSVGDIIKADTFAVGDAVDVAGVSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR     L+ THG     R  GS G    P RVFK K + G MG   VTV+NL +V
Sbjct: 120 AGTIKRFGNHRLKETHGSGPVARHAGSNGACSSPSRVFKGKGLPGHMGAENVTVQNLSIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +D +  LI ++G +PGA K   + + DS K+
Sbjct: 180 KIDAENNLIAIRGAIPGA-KGGVVFITDSVKA 210


>gi|307708060|ref|ZP_07644528.1| ribosomal protein L3 [Streptococcus mitis NCTC 12261]
 gi|307615845|gb|EFN95050.1| ribosomal protein L3 [Streptococcus mitis NCTC 12261]
          Length = 208

 Score =  255 bits (651), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 89/213 (41%), Positives = 129/213 (60%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY A+QVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGELIPVTVIEAAPNVVLQVKTVETDGYNAIQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNVEGLEVGAEITVETFAAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFK K +AGRMGG+RVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+ 
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAG 207


>gi|262373521|ref|ZP_06066799.1| 50S ribosomal protein L3 [Acinetobacter junii SH205]
 gi|262311274|gb|EEY92360.1| 50S ribosomal protein L3 [Acinetobacter junii SH205]
          Length = 214

 Score =  255 bits (651), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 95/213 (44%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+ +D  ++   +TL+ +GY A+QV  GE +   
Sbjct: 3   MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAIQVTTGERRESR 62

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFRV + + +   VG       FTVGQ+VDVTG + GKG
Sbjct: 63  VTSAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGSIGVDLFTVGQIVDVTGQSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVTV+ LE+
Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VS+D +R +++VKG +PG+     ++VR + K+
Sbjct: 183 VSIDAERSVLVVKGAIPGSTGGD-VIVRPTIKA 214


>gi|212288599|sp|A2SLF7|RL3_METPP RecName: Full=50S ribosomal protein L3
          Length = 226

 Score =  255 bits (651), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 92/215 (42%), Positives = 124/215 (57%), Gaps = 2/215 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ RK+GM  ++  +G  +PVTVL + N +V   +T++ +GY A+QV  G  K   V
Sbjct: 9   RLGLLGRKVGMMRIFTDDGDAVPVTVLDVSNNRVTQVKTVETDGYSAIQVTFGARKASRV 68

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +KP  G  +   V   + L EF V  +       G       F  GQ VDV G +IGKGF
Sbjct: 69  TKPEAGHLAKAGVEAGEILREFAVSAEVAAEYKPGGTLPVGLFAAGQKVDVQGTSIGKGF 128

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNFG  RA+HG S SH   GS    QDPGRVF  KKM+G  G    T +NL++V
Sbjct: 129 TGTIKRHNFGSQRASHGNSRSHNVPGSISMAQDPGRVFPGKKMSGHRGDVTKTTQNLDIV 188

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            VD+ R L+LV+G VPGA KN ++ VR + K    
Sbjct: 189 RVDEARQLLLVRGAVPGA-KNGFVTVRPAVKVKAK 222


>gi|312866521|ref|ZP_07726738.1| 50S ribosomal protein L3 [Streptococcus downei F0415]
 gi|311097952|gb|EFQ56179.1| 50S ribosomal protein L3 [Streptococcus downei F0415]
          Length = 208

 Score =  255 bits (651), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 94/213 (44%), Positives = 130/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VGS  +   F  G +VDVTG T GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSELTVEQFEAGDVVDVTGTTKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLE+ 
Sbjct: 118 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIA 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  +  +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVVPEMNVILIKGNVPGAKK-SLITIKTAVKAA 207


>gi|114797091|ref|YP_761529.1| 50S ribosomal protein L3 [Hyphomonas neptunium ATCC 15444]
 gi|123322946|sp|Q0BYB4|RL3_HYPNA RecName: Full=50S ribosomal protein L3
 gi|114737265|gb|ABI75390.1| ribosomal protein L3 [Hyphomonas neptunium ATCC 15444]
          Length = 252

 Score =  255 bits (651), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 126/234 (53%), Positives = 159/234 (67%), Gaps = 17/234 (7%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK--------------NGYM 47
           R+GV+ARK+GMT ++  +GR +PVTVL LD CQVV  R+ ++              +GY 
Sbjct: 7   RTGVLARKVGMTRIFAADGRHVPVTVLSLDGCQVVGVRSEEERSVTTKKGGQVTRTDGYK 66

Query: 48  AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
           AV +G+G+ K KN +K +RG F+   V+PK KL EFRV  D  L  VGS     +F  GQ
Sbjct: 67  AVIMGSGDKKAKNTTKALRGQFAKAGVAPKAKLKEFRVSGD--LPEVGSTVQADHFAEGQ 124

Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
           LVDV+ M+IGKGF+GAMKR NF GLRA+HGVSISHR+HGSTG  QDPGRVFKNKKMAG +
Sbjct: 125 LVDVSAMSIGKGFAGAMKRWNFSGLRASHGVSISHRAHGSTGMNQDPGRVFKNKKMAGHL 184

Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
           G  RVT +NL VV  D +RGLILVKG VPG    +++ VRD+ K A+      +
Sbjct: 185 GDERVTTQNLVVVRTDVERGLILVKGSVPG-HDGTFVEVRDAVKKALPADAPAA 237


>gi|319761138|ref|YP_004125075.1| 50S ribosomal protein l3 [Alicycliphilus denitrificans BC]
 gi|330822996|ref|YP_004386299.1| 50S ribosomal protein L3 [Alicycliphilus denitrificans K601]
 gi|317115699|gb|ADU98187.1| 50S ribosomal protein L3 [Alicycliphilus denitrificans BC]
 gi|329308368|gb|AEB82783.1| 50S ribosomal protein L3 [Alicycliphilus denitrificans K601]
          Length = 224

 Score =  255 bits (651), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 88/214 (41%), Positives = 128/214 (59%), Gaps = 3/214 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  +PVTV+ + N +V   +T + +GY+A+QV  G  K   V+K
Sbjct: 8   GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVALQVTFGSRKASRVTK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121
           P  G  +   V   + + EF V  +       G+       F VGQ VDV G +IGKG++
Sbjct: 68  PEAGHLAKAGVEAGEIIREFPVTAEVAGKYAAGATVPVADVFAVGQKVDVQGTSIGKGYA 127

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNFG  RA+HG S SH   GS G  QDPGR+F  KKM G +G   VT +NL+VV 
Sbjct: 128 GTIKRHNFGSQRASHGNSRSHNVPGSIGMAQDPGRIFPGKKMTGHLGDATVTTQNLDVVR 187

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           +D+ R L+L+KG VPG+ K  ++ VR + K+  +
Sbjct: 188 IDEARQLLLIKGAVPGS-KGGFVTVRPAVKAKAS 220


>gi|308235496|ref|ZP_07666233.1| 50S ribosomal protein L3 [Gardnerella vaginalis ATCC 14018]
 gi|311115167|ref|YP_003986388.1| 50S ribosomal protein L3 [Gardnerella vaginalis ATCC 14019]
 gi|310946661|gb|ADP39365.1| 50S ribosomal protein L3 [Gardnerella vaginalis ATCC 14019]
          Length = 216

 Score =  255 bits (651), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 84/212 (39%), Positives = 121/212 (57%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+ ++ RKLGM+ V++  G  +PVT++ +    V   +T + +GY AVQ+G G+     V
Sbjct: 7   RTALLGRKLGMSQVWDENGLFVPVTLVEVATNVVTAVKTEETDGYCAVQLGYGQIDPTKV 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G F+   V+P++ L E R +   D  P G   +   F  G  VDVTG T GKGF+
Sbjct: 67  TKPLAGHFAKAGVTPRRHLAEVRTENAADYKP-GQELTAEVFAEGAEVDVTGTTKGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F   R THG   + R  GS G    P R+ K K+MAGRMG    T  NL +VS
Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTSTALNLTIVS 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D + G++ +KG +PG  K + +LVR + K A
Sbjct: 186 SDVENGILAIKGAIPGP-KGAIVLVRSAVKGA 216


>gi|210631082|ref|ZP_03296738.1| hypothetical protein COLSTE_00623 [Collinsella stercoris DSM 13279]
 gi|210160170|gb|EEA91141.1| hypothetical protein COLSTE_00623 [Collinsella stercoris DSM 13279]
          Length = 206

 Score =  255 bits (651), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 90/209 (43%), Positives = 121/209 (57%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M + ++ RK+GMT V++ +   +PVTV+    C V   +T   +GY AVQ+G G+ K K+
Sbjct: 1   MINMILGRKIGMTQVWDEDDNVVPVTVIQAGPCTVSQVKTEATDGYNAVQIGFGDIKSKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM G F+   V P + L E RV+  ++   VG V + + F     VDV G + GKGF
Sbjct: 61  VNKPMAGHFAKAGVEPVRYLREVRVENGEEH-KVGDVVTVADFESVAKVDVIGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR N      +HG  I  R  GS G    P RV K  KMAG MG  RVTVKNL VV
Sbjct: 120 QGRIKRWNQHRGPMSHGSHI-QRHPGSIGQCAYPARVLKGVKMAGHMGNARVTVKNLSVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            +D ++ LILVKG VPG  KN  + +R +
Sbjct: 179 RIDAEQNLILVKGAVPGG-KNGLVAIRMA 206


>gi|167629467|ref|YP_001679966.1| 50S ribosomal protein l3 [Heliobacterium modesticaldum Ice1]
 gi|212288399|sp|B0TC56|RL3_HELMI RecName: Full=50S ribosomal protein L3
 gi|167592207|gb|ABZ83955.1| 50S ribosomal protein l3 [Heliobacterium modesticaldum Ice1]
          Length = 210

 Score =  255 bits (651), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 91/211 (43%), Positives = 129/211 (61%), Gaps = 4/211 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           + G++ RK+GMT V+   G  +PVTV+    C VV  +T++K+GY AVQ+G G+ + K +
Sbjct: 3   KKGLLGRKIGMTQVFADNGVAVPVTVVQAGPCVVVQKKTVEKDGYEAVQIGFGDVREKLL 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP RG   +  V   + L E +V   D+   VG       F+ G+ VDV G + GKGF+
Sbjct: 63  NKPKRGHLKNAGVRLVRVLREIKVDSMDE-YKVGQELKADVFSAGEYVDVVGTSKGKGFA 121

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNF      HG S  HR  GS G +  P R+FK +KM GRMG  RVTV+ L+VV 
Sbjct: 122 GGIKRHNFKRGPMKHG-SKYHRRPGSAGAKG-PARIFKGRKMPGRMGNERVTVQKLQVVR 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VD +R L+L+KG VPG K+   +L++ S K+
Sbjct: 180 VDAERNLLLIKGAVPGPKRG-LLLIKSSIKA 209


>gi|125716985|ref|YP_001034118.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK36]
 gi|323350940|ref|ZP_08086598.1| 50S ribosomal protein L3 [Streptococcus sanguinis VMC66]
 gi|166234600|sp|A3CK63|RL3_STRSV RecName: Full=50S ribosomal protein L3
 gi|125496902|gb|ABN43568.1| 50S ribosomal protein L3, putative [Streptococcus sanguinis SK36]
 gi|322122922|gb|EFX94628.1| 50S ribosomal protein L3 [Streptococcus sanguinis VMC66]
 gi|324990002|gb|EGC21943.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK353]
 gi|324991815|gb|EGC23740.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK405]
 gi|324996295|gb|EGC28203.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK678]
 gi|325686405|gb|EGD28435.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK72]
 gi|325695810|gb|EGD37707.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK150]
 gi|325697976|gb|EGD39859.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK160]
 gi|327458431|gb|EGF04787.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK1]
 gi|327463723|gb|EGF10039.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK1057]
 gi|327467335|gb|EGF12835.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK330]
 gi|327471742|gb|EGF17183.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK408]
 gi|327490463|gb|EGF22245.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK1058]
 gi|328945217|gb|EGG39371.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK1087]
          Length = 208

 Score =  255 bits (651), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 91/213 (42%), Positives = 131/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGELIPVTVVEAAPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK++AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTIQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+ 
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAG 207


>gi|226942778|ref|YP_002797851.1| 50S ribosomal protein L3 [Azotobacter vinelandii DJ]
 gi|226717705|gb|ACO76876.1| 50S ribosomal protein L3 [Azotobacter vinelandii DJ]
          Length = 200

 Score =  255 bits (651), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 89/201 (44%), Positives = 128/201 (63%), Gaps = 3/201 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT ++  EG  +PVTV+ ++  +V   +  + +GY+AVQV  GE +   V+K   G F+ 
Sbjct: 1   MTRIFTEEGVSVPVTVIEIEPNRVTQFKNAESDGYLAVQVTVGERRASRVTKAQAGHFAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
            NV+  + ++EFR+++ +     G   +   F  GQLVDVTG + GKG++G +KR NF G
Sbjct: 61  ANVAAGRGVWEFRLEEGE--YQSGDQITVEIFQAGQLVDVTGQSKGKGYAGTIKRWNFRG 118

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
              THG S+SHR  GS G  Q PGRVFK KKM+G +G  RVTV++LEVV VD +R L+LV
Sbjct: 119 QDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHLGAERVTVQSLEVVRVDSERNLLLV 178

Query: 192 KGCVPGAKKNSWILVRDSFKS 212
           KG +PGA     ++VR + K+
Sbjct: 179 KGAIPGATGGD-VIVRPAAKA 198


>gi|326385099|ref|ZP_08206769.1| 50S ribosomal protein L3 [Gordonia neofelifaecis NRRL B-59395]
 gi|326196184|gb|EGD53388.1| 50S ribosomal protein L3 [Gordonia neofelifaecis NRRL B-59395]
          Length = 218

 Score =  255 bits (651), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 93/214 (43%), Positives = 127/214 (59%), Gaps = 2/214 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
             G++  KLGMT V++   R +PVTV+   +  V   RT D++GY A+Q+  G    + V
Sbjct: 7   TKGILGTKLGMTQVFDENNRVVPVTVIATGSNVVTQLRTADRDGYTAIQLAYGAIDPRKV 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G F+   V+P++ L E R+  D     VG       F  G  VDVTG + GKGF+
Sbjct: 67  NKPVAGQFAKAGVTPRRHLTEIRI-NDISEFEVGQELGADIFAEGVKVDVTGTSKGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F GL A+HG    HRS GS G    PGRVFK  +MAGRMG ++VT +NL V  
Sbjct: 126 GVMKRHGFAGLGASHGAHRVHRSPGSIGGCATPGRVFKGTRMAGRMGSDKVTTQNLTVHK 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           VD + GL+L+KG +PG +K   ++VRD+ K    
Sbjct: 186 VDAEAGLLLIKGAIPG-RKGGIVVVRDAVKGGAK 218


>gi|299820955|ref|ZP_07052844.1| 50S ribosomal protein L3 [Listeria grayi DSM 20601]
 gi|299817976|gb|EFI85211.1| 50S ribosomal protein L3 [Listeria grayi DSM 20601]
          Length = 209

 Score =  255 bits (651), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 88/212 (41%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T+D +GY AVQ+G    + K 
Sbjct: 1   MTKGILGRKVGMTQVFTENGELIPVTVIEAAENVVLQKKTVDTDGYEAVQIGFENKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G     N +PK+ + E R   + D   +G+      F  G +VD TG++ GKGF
Sbjct: 61  SNKPEKGHVVKANTTPKRFIREIR-DVNLDEYEIGAEVKVDVFAEGDIVDATGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK + GRMGG +VT++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQVTIQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  + ++LVKG VPGAKK S + ++ + K+
Sbjct: 178 KVDVDKNILLVKGNVPGAKK-SLVQIKTAVKA 208


>gi|126643095|ref|YP_001086079.1| 50S ribosomal protein L3 [Acinetobacter baumannii ATCC 17978]
 gi|184159598|ref|YP_001847937.1| 50S ribosomal protein L3 [Acinetobacter baumannii ACICU]
 gi|260557027|ref|ZP_05829244.1| 50S ribosomal protein L3 [Acinetobacter baumannii ATCC 19606]
 gi|212288243|sp|B2HZM2|RL3_ACIBC RecName: Full=50S ribosomal protein L3
 gi|183211192|gb|ACC58590.1| 50S ribosomal protein L3 [Acinetobacter baumannii ACICU]
 gi|260409633|gb|EEX02934.1| 50S ribosomal protein L3 [Acinetobacter baumannii ATCC 19606]
          Length = 214

 Score =  254 bits (650), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 98/213 (46%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+ +D  ++   +TL+ +GY AVQV  GE +   
Sbjct: 3   MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 62

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFRV + + +   VG       FTVGQ+VDVTG + GKG
Sbjct: 63  VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVTV+ LE+
Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VSVD +R +++VKG +PGA     ++VR + K+
Sbjct: 183 VSVDTERSVLVVKGAIPGATGGD-VIVRPTIKA 214


>gi|325964166|ref|YP_004242072.1| 50S ribosomal protein L3P [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470253|gb|ADX73938.1| LSU ribosomal protein L3P [Arthrobacter phenanthrenivorans Sphe3]
          Length = 216

 Score =  254 bits (650), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 91/211 (43%), Positives = 125/211 (59%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   + IPVTV+  D+  +   R  + +GY+AVQ+G G+   + V+
Sbjct: 8   KGLLGTKLGMTQVWDENNKLIPVTVVQADSNVITQLRNAEADGYVAVQIGYGQIDPRKVT 67

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    V+P++ + E R   D     +G   S   F  GQ +DV G T GKGF+G
Sbjct: 68  KPLAGHFEKAGVTPRRHVVELR-TADAAEYELGQELSVEVFEAGQKIDVIGTTKGKGFAG 126

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    P RVFK  KMAGRMG  R T  NL V +V
Sbjct: 127 VMKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGMKMAGRMGAVRHTTLNLTVHAV 186

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++ L+L+KG VPGA +   +LVR + K A
Sbjct: 187 DVEKSLLLIKGAVPGA-RGQVVLVRTAVKGA 216


>gi|317501774|ref|ZP_07959960.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331088705|ref|ZP_08337615.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 3_1_46FAA]
 gi|316896807|gb|EFV18892.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330407228|gb|EGG86731.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 227

 Score =  254 bits (650), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 87/229 (37%), Positives = 123/229 (53%), Gaps = 20/229 (8%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV- 58
           M+  ++A K+GMT ++N  +G  IPVTVL    C V   +T++ +GY AVQVG  + K  
Sbjct: 1   MKKAILATKVGMTQIFNHEDGVLIPVTVLQAGPCVVTQVKTVENDGYSAVQVGYVDKKDK 60

Query: 59  ---------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
                            V+K  +G F    VS K+ + EFR    ++   +        F
Sbjct: 61  IVTKDGSGRKAIAHRNGVTKAEKGHFDKAGVSGKRYVKEFRFDNAEE-YALAQEIKADIF 119

Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
             G  +D T ++ GKGF GA+KRH       THG S  HR  GS G   DP +VFK KKM
Sbjct: 120 AEGDHIDATAISKGKGFQGAIKRHGQSRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKM 178

Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            G+MG  ++TV+NLE+V VD +  L+LVKG VPG KK   + ++++ K 
Sbjct: 179 PGQMGNKKITVQNLEIVRVDAENNLLLVKGSVPGPKK-CLVTIKETVKG 226


>gi|154483187|ref|ZP_02025635.1| hypothetical protein EUBVEN_00888 [Eubacterium ventriosum ATCC
           27560]
 gi|149735995|gb|EDM51881.1| hypothetical protein EUBVEN_00888 [Eubacterium ventriosum ATCC
           27560]
          Length = 198

 Score =  254 bits (650), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 86/202 (42%), Positives = 117/202 (57%), Gaps = 5/202 (2%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT ++N  G  +PVTVL    C V   +T++ +GY AVQVG  + + K V+KP++G F  
Sbjct: 1   MTQIFNEAGELVPVTVLQAGPCVVTQVKTIENDGYEAVQVGFEDIREKLVNKPVKGMFDK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             VS K+ + EF+++ +     V        F  G  +D T +  GKGF GA+KRH    
Sbjct: 61  AGVSYKRYVREFKLEGE---YSVKDEIKVDVFEAGDKIDATAIAKGKGFQGAIKRHGQSR 117

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
               HG S  HR  GS G    P RVFK KKM G MGG +VT +NLEVV VD ++ L+LV
Sbjct: 118 GPMAHG-SKYHRHAGSNGSCSTPSRVFKGKKMPGHMGGKKVTTQNLEVVRVDAEKNLLLV 176

Query: 192 KGCVPGAKKNSWILVRDSFKSA 213
           KG VPG KK S + +++S K+ 
Sbjct: 177 KGAVPGPKK-SLVTIKESVKAG 197


>gi|329945684|ref|ZP_08293414.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 170 str.
           F0386]
 gi|328528492|gb|EGF55466.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 170 str.
           F0386]
          Length = 222

 Score =  254 bits (650), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 90/209 (43%), Positives = 128/209 (61%), Gaps = 2/209 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++  KLGMT +++  G   PVTV+ +D   V   RT++ +GY AVQ+  G+   + V+KP
Sbjct: 16  LLGTKLGMTQIWDENGVLRPVTVVRVDTNVVTQVRTIETDGYEAVQLAFGDINARKVTKP 75

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + G F+   V P++ + E R     +  P G   +   F VGQLVDVTG + GKGF+G M
Sbjct: 76  LAGHFAKAGVEPRRHVAEVRTSLASEFTP-GQELAADTFEVGQLVDVTGTSKGKGFAGVM 134

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH F G+ A+HG   +HR  GS G    PGR+FK  +MAGRMG  R TV+NL++  VD 
Sbjct: 135 KRHGFAGVGASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGHARRTVQNLKIRGVDV 194

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +G++LV G +PG  K S ++VR + K A
Sbjct: 195 DKGVLLVNGAIPGP-KGSVVVVRTAVKGA 222


>gi|169794594|ref|YP_001712387.1| 50S ribosomal protein L3 [Acinetobacter baumannii AYE]
 gi|213158835|ref|YP_002320833.1| ribosomal protein L3 [Acinetobacter baumannii AB0057]
 gi|215482183|ref|YP_002324365.1| Ribosomal protein L3 family protein [Acinetobacter baumannii
           AB307-0294]
 gi|239503234|ref|ZP_04662544.1| 50S ribosomal protein L3 [Acinetobacter baumannii AB900]
 gi|294839747|ref|ZP_06784430.1| 50S ribosomal protein L3 [Acinetobacter sp. 6013113]
 gi|294842653|ref|ZP_06787336.1| 50S ribosomal protein L3 [Acinetobacter sp. 6014059]
 gi|294860425|ref|ZP_06798194.1| 50S ribosomal protein L3 [Acinetobacter sp. 6013150]
 gi|301345010|ref|ZP_07225751.1| 50S ribosomal protein L3 [Acinetobacter baumannii AB056]
 gi|301512059|ref|ZP_07237296.1| 50S ribosomal protein L3 [Acinetobacter baumannii AB058]
 gi|301596104|ref|ZP_07241112.1| 50S ribosomal protein L3 [Acinetobacter baumannii AB059]
 gi|226725115|sp|B7GW02|RL3_ACIB3 RecName: Full=50S ribosomal protein L3
 gi|226725116|sp|B7IA39|RL3_ACIB5 RecName: Full=50S ribosomal protein L3
 gi|226725118|sp|B0V6W8|RL3_ACIBY RecName: Full=50S ribosomal protein L3
 gi|226725207|sp|A3M983|RL3_ACIBT RecName: Full=50S ribosomal protein L3
 gi|169147521|emb|CAM85382.1| 50S ribosomal protein L3 [Acinetobacter baumannii AYE]
 gi|193078477|gb|ABO13477.2| 50S ribosomal protein L3 [Acinetobacter baumannii ATCC 17978]
 gi|213057995|gb|ACJ42897.1| ribosomal protein L3 [Acinetobacter baumannii AB0057]
 gi|213985898|gb|ACJ56197.1| Ribosomal protein L3 family protein [Acinetobacter baumannii
           AB307-0294]
 gi|322509508|gb|ADX04962.1| 50S ribosomal protein L3 [Acinetobacter baumannii 1656-2]
 gi|323519528|gb|ADX93909.1| 50S ribosomal protein L3 [Acinetobacter baumannii TCDC-AB0715]
          Length = 212

 Score =  254 bits (650), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 98/213 (46%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+ +D  ++   +TL+ +GY AVQV  GE +   
Sbjct: 1   MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFRV + + +   VG       FTVGQ+VDVTG + GKG
Sbjct: 61  VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVTV+ LE+
Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VSVD +R +++VKG +PGA     ++VR + K+
Sbjct: 181 VSVDTERSVLVVKGAIPGATGGD-VIVRPTIKA 212


>gi|152980599|ref|YP_001355101.1| large subunit ribosomal protein L3 [Janthinobacterium sp.
           Marseille]
 gi|212288401|sp|A6T3K4|RL3_JANMA RecName: Full=50S ribosomal protein L3
 gi|151280676|gb|ABR89086.1| large subunit ribosomal protein L3 [Janthinobacterium sp.
           Marseille]
          Length = 224

 Score =  254 bits (650), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 97/213 (45%), Positives = 126/213 (59%), Gaps = 2/213 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  IPVTVL + N +V   +T + +GY AVQV  G  +   V+K
Sbjct: 10  GLLGRKVGMMRIFTDDGDSIPVTVLDVSNNRVTQIKTSEVDGYSAVQVAFGSRRASRVNK 69

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQK-DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
              G F+   V     L EFRV       L VG V + S F VGQ VDV G+TIGKG++G
Sbjct: 70  ASAGHFAKAGVEAGTVLKEFRVAATAASELKVGDVIAASLFEVGQKVDVQGVTIGKGYAG 129

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR+NFG  RATHG S SH   GS G  QDPGRVF  K+M G +G    T +NLE+  +
Sbjct: 130 VIKRYNFGSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTRTTQNLEIARI 189

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           D  R L+LVKG VPGA KN  ++V  + K    
Sbjct: 190 DADRQLLLVKGAVPGA-KNGQVIVSPAVKVKAK 221


>gi|23336501|ref|ZP_00121715.1| COG0087: Ribosomal protein L3 [Bifidobacterium longum DJO10A]
 gi|23466130|ref|NP_696733.1| 50S ribosomal protein L3 [Bifidobacterium longum NCC2705]
 gi|189440569|ref|YP_001955650.1| 50S ribosomal protein L3 [Bifidobacterium longum DJO10A]
 gi|227546476|ref|ZP_03976525.1| ribosomal protein L3 [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|239621010|ref|ZP_04664041.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|296454870|ref|YP_003662014.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. longum
           JDM301]
 gi|312133874|ref|YP_004001213.1| rplc [Bifidobacterium longum subsp. longum BBMN68]
 gi|317483450|ref|ZP_07942440.1| 50S ribosomal protein L3 [Bifidobacterium sp. 12_1_47BFAA]
 gi|322689929|ref|YP_004209663.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. infantis
           157F]
 gi|322691870|ref|YP_004221440.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|42559648|sp|Q8G417|RL3_BIFLO RecName: Full=50S ribosomal protein L3
 gi|226725135|sp|B3DQ13|RL3_BIFLD RecName: Full=50S ribosomal protein L3
 gi|23326866|gb|AAN25369.1| 50S ribosomal protein L3 [Bifidobacterium longum NCC2705]
 gi|189429004|gb|ACD99152.1| Ribosomal protein L3 [Bifidobacterium longum DJO10A]
 gi|227213025|gb|EEI80904.1| ribosomal protein L3 [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|239516111|gb|EEQ55978.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|291516469|emb|CBK70085.1| LSU ribosomal protein L3P [Bifidobacterium longum subsp. longum F8]
 gi|296184302|gb|ADH01184.1| ribosomal protein L3 [Bifidobacterium longum subsp. longum JDM301]
 gi|311773167|gb|ADQ02655.1| RplC [Bifidobacterium longum subsp. longum BBMN68]
 gi|316915136|gb|EFV36568.1| 50S ribosomal protein L3 [Bifidobacterium sp. 12_1_47BFAA]
 gi|320456726|dbj|BAJ67348.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320461265|dbj|BAJ71885.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. infantis
           157F]
          Length = 213

 Score =  254 bits (650), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 84/212 (39%), Positives = 118/212 (55%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R  ++ +KLGM+ V++  G  +PVT++ +    V   +T + +GY AVQ+G G      V
Sbjct: 4   RKALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKTEESDGYKAVQLGYGAIDPTKV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G F+   V+P++ L E R   D D    G   +   F  G  VDVTG T GKGF+
Sbjct: 64  TKPLAGHFAKAGVTPRRHLVEVRTD-DVDQFEAGQELAADLFEEGAEVDVTGTTKGKGFA 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F   R THG   + R  GS G    P R+ K K+MAGRMG    T +NL VVS
Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTATTQNLTVVS 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D + G++ +KG +PG  K   +LVR + K A
Sbjct: 183 ADVENGILAIKGAIPGP-KGGIVLVRSAVKGA 213


>gi|256380598|ref|YP_003104258.1| ribosomal protein L3 [Actinosynnema mirum DSM 43827]
 gi|255924901|gb|ACU40412.1| ribosomal protein L3 [Actinosynnema mirum DSM 43827]
          Length = 216

 Score =  254 bits (650), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 122/212 (57%), Gaps = 2/212 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   R +PVTV+  +   V   RT + +GY AVQ+  G    + V 
Sbjct: 7   KGLLGTKLGMTQVFDENNRVVPVTVVKAEPNVVTQVRTQENDGYSAVQLAFGAIDPRKVI 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   V+P++ L E R   D     VG   +   F  G +VDV G + GKG++G
Sbjct: 67  KPVAGHFAKAGVTPRRHLAELRTT-DASEYQVGQEITAEVFEAGAVVDVVGTSRGKGYAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F GL A+HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL+V  V
Sbjct: 126 VMKRHGFAGLGASHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGHARVTTQNLKVFRV 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D + GL+L+KG VPG  K   + V+ + K   
Sbjct: 186 DAESGLLLIKGAVPGP-KGGTVFVKTAAKGGA 216


>gi|171741273|ref|ZP_02917080.1| hypothetical protein BIFDEN_00348 [Bifidobacterium dentium ATCC
           27678]
 gi|283455366|ref|YP_003359930.1| 50S ribosomal protein L3 [Bifidobacterium dentium Bd1]
 gi|306823568|ref|ZP_07456943.1| 50S ribosomal protein L3 [Bifidobacterium dentium ATCC 27679]
 gi|309802910|ref|ZP_07697011.1| 50S ribosomal protein L3 [Bifidobacterium dentium JCVIHMP022]
 gi|171276887|gb|EDT44548.1| hypothetical protein BIFDEN_00348 [Bifidobacterium dentium ATCC
           27678]
 gi|283102000|gb|ADB09106.1| rplC 50S ribosomal protein L3 [Bifidobacterium dentium Bd1]
 gi|304553275|gb|EFM41187.1| 50S ribosomal protein L3 [Bifidobacterium dentium ATCC 27679]
 gi|308220377|gb|EFO76688.1| 50S ribosomal protein L3 [Bifidobacterium dentium JCVIHMP022]
          Length = 213

 Score =  254 bits (650), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 82/212 (38%), Positives = 122/212 (57%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+ ++ +KLGM+ V++  G  +PVT++ +    V   ++ + +GY AVQ+G G+     V
Sbjct: 4   RTALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKSEESDGYKAVQLGYGQVDPTKV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G F+   V+P++ L E R    ++  P G   +   F  G LVDVTG T GKGF+
Sbjct: 64  TKPLAGHFAKAGVTPRRHLAEVRTDNAEEFEP-GQELTAELFPEGTLVDVTGTTKGKGFA 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F   R THG   + R  GS G    P R+ K K+MAGRMG    T +NL +VS
Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTNTAQNLTIVS 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D + G++ +KG +PG  K   +LVR + K A
Sbjct: 183 SDVENGVLAIKGAIPGP-KGGIVLVRSAVKGA 213


>gi|293610824|ref|ZP_06693124.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827168|gb|EFF85533.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 212

 Score =  254 bits (650), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 97/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+ +D  ++   +TL+ +GY AVQV  GE +   
Sbjct: 1   MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFRV + + +   VG       FTVGQ+VDVTG + GKG
Sbjct: 61  VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQVVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVTV+ LE+
Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VS+D +R +++VKG +PGA     ++VR + K+
Sbjct: 181 VSIDAERSVLVVKGAIPGATGGD-VIVRPTIKA 212


>gi|329116829|ref|ZP_08245546.1| 50S ribosomal protein L3 [Streptococcus parauberis NCFD 2020]
 gi|326907234|gb|EGE54148.1| 50S ribosomal protein L3 [Streptococcus parauberis NCFD 2020]
          Length = 208

 Score =  254 bits (650), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 93/213 (43%), Positives = 130/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTETGEFIPVTVIEAAANVVLQVKTIETDGYEAVQVGFDDKREIL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VGS  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSEITVDTFVAGDIVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++  IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNAILIKGNVPGAKK-SLITIKSAVKAA 207


>gi|302388712|ref|YP_003824533.1| LSU ribosomal protein L3P [Thermosediminibacter oceani DSM 16646]
 gi|302199340|gb|ADL06910.1| LSU ribosomal protein L3P [Thermosediminibacter oceani DSM 16646]
          Length = 209

 Score =  254 bits (650), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 89/210 (42%), Positives = 129/210 (61%), Gaps = 4/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
             ++  KLGMT +++  G+ +PVTV+    C V+  +T + +GY A++VG  + K   ++
Sbjct: 4   KAILGIKLGMTQIFDEAGQAVPVTVVEAGPCVVMQKKTPEIDGYSALKVGFVDVKEHRLT 63

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    + PKK + E ++ +  D   VG       F  G+ VDVTG++IGKGF+G
Sbjct: 64  KPVLGQFRKYQLKPKKYIRELKIDE-VDKYNVGDEIKVDIFKPGERVDVTGISIGKGFAG 122

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF     +HG S+ HR  GS G   DP RVFK KKM G +G  RVTV+NLE+V V
Sbjct: 123 GVKRWNFNRGPMSHG-SMYHRRPGSGGA-TDPERVFKGKKMPGHLGHERVTVQNLEIVKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPG KK S + ++ + KS
Sbjct: 181 DPERNLLLIKGSVPGTKK-SLLYIKSTVKS 209


>gi|56751874|ref|YP_172575.1| 50S ribosomal protein L3 [Synechococcus elongatus PCC 6301]
 gi|81301041|ref|YP_401249.1| 50S ribosomal protein L3 [Synechococcus elongatus PCC 7942]
 gi|3122742|sp|O24689|RL3_SYNP6 RecName: Full=50S ribosomal protein L3
 gi|109893565|sp|Q31L07|RL3_SYNE7 RecName: Full=50S ribosomal protein L3
 gi|2446890|dbj|BAA22449.1| 50S ribosomal protein L3 [Synechococcus elongatus PCC 6301]
 gi|56686833|dbj|BAD80055.1| 50S ribosomal protein L3 [Synechococcus elongatus PCC 6301]
 gi|81169922|gb|ABB58262.1| LSU ribosomal protein L3P [Synechococcus elongatus PCC 7942]
          Length = 213

 Score =  254 bits (650), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 85/209 (40%), Positives = 120/209 (57%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT +++  G+ +PVTV+    C +   +T+  +GY A+Q+G  E + K 
Sbjct: 1   MSIGILGTKLGMTQIFDESGKAVPVTVIQAGPCPITQIKTVATDGYNAIQIGFLEVREKQ 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SKP  G  S     P + L E+RV    D L +G   +   F  GQ VDV G TIG+GF
Sbjct: 61  LSKPELGHLSKAGAPPLRHLLEYRV-PSTDGLELGQALTADRFEAGQKVDVQGHTIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     +HG S +HR  GSTG    PGRV+  K+MAGR G ++ T++ L VV
Sbjct: 120 TGYQKRHGFARGPMSHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGRSGNDKTTIRGLTVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            VD  R L+LVKG VPG    + + +  +
Sbjct: 179 RVDADRNLLLVKGSVPGKP-GALLNITPA 206


>gi|225376409|ref|ZP_03753630.1| hypothetical protein ROSEINA2194_02051 [Roseburia inulinivorans DSM
           16841]
 gi|225211785|gb|EEG94139.1| hypothetical protein ROSEINA2194_02051 [Roseburia inulinivorans DSM
           16841]
          Length = 227

 Score =  254 bits (650), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 85/229 (37%), Positives = 120/229 (52%), Gaps = 19/229 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58
           M+  ++A K+GMT ++N +G  +PVTVL    C V   +T++ +GY AVQV   + K   
Sbjct: 1   MKKAILATKVGMTQIFNADGVLVPVTVLEAGPCSVTQIKTVENDGYSAVQVAFADKKERI 60

Query: 59  --------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
                           V+K   G F+   VS K+ + EF+ +   +   +G V     F 
Sbjct: 61  VNKDANGKKEIRNRHGVNKAQMGHFAKAGVSGKRFVKEFKFENAAE-YNLGDVIKADIFA 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  +D T ++ GKGF GA+KR         HG S  HR  GS G    P RVFK K M 
Sbjct: 120 EGDKIDATAISKGKGFQGAIKRFGQHRGPMAHG-SKFHRHQGSNGACSSPSRVFKGKGMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           G MG  +VT +NLEVV VD +  L+LVKG VPGAKK   + ++++ K+ 
Sbjct: 179 GHMGSVKVTTQNLEVVRVDAENNLLLVKGAVPGAKK-CLVTIKETVKAG 226


>gi|260886876|ref|ZP_05898139.1| 50S ribosomal protein L3 [Selenomonas sputigena ATCC 35185]
 gi|330839326|ref|YP_004413906.1| 50S ribosomal protein L3 [Selenomonas sputigena ATCC 35185]
 gi|260863475|gb|EEX77975.1| 50S ribosomal protein L3 [Selenomonas sputigena ATCC 35185]
 gi|329747090|gb|AEC00447.1| 50S ribosomal protein L3 [Selenomonas sputigena ATCC 35185]
          Length = 219

 Score =  254 bits (650), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 98/221 (44%), Positives = 133/221 (60%), Gaps = 5/221 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ RKLGMT ++  EG  +PVTV+   N  V++++T++ +GY AVQ+G GE K K 
Sbjct: 1   MSKAILGRKLGMTQIFTEEGTVVPVTVVESGNNVVIMNKTVENDGYNAVQIGFGEVKEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F+   V+P + + E R+  D     VG       F  G LVDVTG + GKGF
Sbjct: 61  VTKPLKGHFAKAGVAPVRFIREMRLT-DASEYNVGDTIGVDIFAAGDLVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KRHNF      HG S SHR  GSTG       GRV K KK+ G+MG  RVTV+ L 
Sbjct: 120 AGTIKRHNFARGPMGHG-SKSHREPGSTGAMISGHGGRVLKGKKLPGQMGHARVTVQRLS 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           VV VD +R LIL+KG +PG KK   ++VR + K     K +
Sbjct: 179 VVRVDAERNLILIKGAIPGPKKG-LVVVRATVKPDKPKKAE 218


>gi|300742057|ref|ZP_07072078.1| 50S ribosomal protein L3 [Rothia dentocariosa M567]
 gi|311111973|ref|YP_003983195.1| 50S ribosomal protein L3 [Rothia dentocariosa ATCC 17931]
 gi|300381242|gb|EFJ77804.1| 50S ribosomal protein L3 [Rothia dentocariosa M567]
 gi|310943467|gb|ADP39761.1| 50S ribosomal protein L3 [Rothia dentocariosa ATCC 17931]
          Length = 218

 Score =  254 bits (650), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 88/211 (41%), Positives = 122/211 (57%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++ +G+ +PVTV+  D+  +   R  + +GY AVQ+G G    + V+
Sbjct: 10  KGLLGTKLGMTQVWDEDGKVVPVTVVKADSNVITQIRNQETDGYHAVQIGFGSIDSRKVT 69

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    V+P++ L E R   D     +G   +   F  GQ VDV G T GKGF+G
Sbjct: 70  KPLAGHFEKAGVTPRRHLVELR-TADAAEYSLGQELTVEMFEPGQKVDVVGKTKGKGFAG 128

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    P RVFK  +MAGRMG  R T  NL +  V
Sbjct: 129 VMKRHGFKGVGASHGQHKNHRKPGSIGGASYPARVFKGMRMAGRMGAARHTTLNLTIQGV 188

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D +  ++L+KG +PG  K   +LVR + K A
Sbjct: 189 DAENNVLLIKGAIPGP-KGGVVLVRTAVKGA 218


>gi|212716611|ref|ZP_03324739.1| hypothetical protein BIFCAT_01540 [Bifidobacterium catenulatum DSM
           16992]
 gi|225351045|ref|ZP_03742068.1| hypothetical protein BIFPSEUDO_02627 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|212660315|gb|EEB20890.1| hypothetical protein BIFCAT_01540 [Bifidobacterium catenulatum DSM
           16992]
 gi|225158501|gb|EEG71743.1| hypothetical protein BIFPSEUDO_02627 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 213

 Score =  254 bits (649), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 83/212 (39%), Positives = 122/212 (57%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+ ++ +KLGM+ V++  G  +PVT++ +    V   ++ + +GY AVQ+G G+     V
Sbjct: 4   RTALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKSEESDGYKAVQLGYGQVDPTKV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G F+   V+P++ L E R    ++  P G   +   F  G LVDVTG T GKGF+
Sbjct: 64  TKPLAGHFAKAGVTPRRHLAEVRTDNAEEFEP-GQELTAELFPEGTLVDVTGTTKGKGFA 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F   R THG   + R  GS G    P R+ K K+MAGRMG    T  NL +VS
Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTNTTLNLTIVS 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D + G++ +KG +PG  K S +LVR + K A
Sbjct: 183 SDVENGVLAIKGAIPGP-KGSIVLVRSAVKGA 213


>gi|121592712|ref|YP_984608.1| 50S ribosomal protein L3 [Acidovorax sp. JS42]
 gi|222109493|ref|YP_002551757.1| 50S ribosomal protein l3 [Acidovorax ebreus TPSY]
 gi|166233110|sp|A1W2Q7|RL3_ACISJ RecName: Full=50S ribosomal protein L3
 gi|254803670|sp|B9MB73|RL3_DIAST RecName: Full=50S ribosomal protein L3
 gi|120604792|gb|ABM40532.1| LSU ribosomal protein L3P [Acidovorax sp. JS42]
 gi|221728937|gb|ACM31757.1| ribosomal protein L3 [Acidovorax ebreus TPSY]
          Length = 224

 Score =  254 bits (649), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 90/214 (42%), Positives = 129/214 (60%), Gaps = 3/214 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  +PVTV+ + N +V   +T + +GY+++QV  G  K   V+K
Sbjct: 8   GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVSLQVTFGSRKASRVTK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121
           P  G  +   V   + + EFRV  +       G+       F VGQ VDV G +IGKGF+
Sbjct: 68  PEAGHLAKAGVEAGEIIREFRVTPEVAGKYAAGAAVPVADVFAVGQKVDVQGTSIGKGFA 127

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNFG  RA+HG S SH   GS G  QDPGRVF  KKM G +G   VT +NL+VV 
Sbjct: 128 GTIKRHNFGSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKKMTGHLGDVTVTTQNLDVVR 187

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           +D+ R L+L+KG VPG+ K  ++ VR + K+  +
Sbjct: 188 IDEARQLLLIKGAVPGS-KGGFVTVRPAVKAQAS 220


>gi|78484640|ref|YP_390565.1| ribosomal protein L3 [Thiomicrospira crunogena XCL-2]
 gi|109893569|sp|Q31IY2|RL3_THICR RecName: Full=50S ribosomal protein L3
 gi|78362926|gb|ABB40891.1| LSU ribosomal protein L3P [Thiomicrospira crunogena XCL-2]
          Length = 212

 Score =  254 bits (649), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 93/213 (43%), Positives = 127/213 (59%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GV+  K+GMT V+N +G   PVTV+ +   ++   +  + +GY A+QV  G      
Sbjct: 1   MGIGVIGTKVGMTRVFNEDGVSTPVTVVEVSPNRITQIKNNETDGYDAIQVTFGSKHAGR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQK--DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           VSKP  G ++   V   + L+EFR+    + + L  GS  +   F    +VDV+G T GK
Sbjct: 61  VSKPEAGHYAKAGVEAGQGLWEFRLDDVSEVEGLEPGSEITVEKFNDVAVVDVSGTTKGK 120

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G +KRHNF    ATHG S+SHR+ GS G  Q PGRVFK KKMAG MG  + T  NLE
Sbjct: 121 GFQGGVKRHNFKMQDATHGNSVSHRAPGSIGQNQTPGRVFKGKKMAGHMGNVKQTTLNLE 180

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +V VD +  L+L+KG +PGA K S ++VR + K
Sbjct: 181 LVKVDVENSLLLIKGALPGA-KGSTVIVRKAIK 212


>gi|88812757|ref|ZP_01128003.1| 50S ribosomal protein L3 [Nitrococcus mobilis Nb-231]
 gi|88789995|gb|EAR21116.1| 50S ribosomal protein L3 [Nitrococcus mobilis Nb-231]
          Length = 219

 Score =  254 bits (649), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 94/212 (44%), Positives = 130/212 (61%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++  +G  +PVTV+     ++  HR  DK+GY A+QV  G  +   
Sbjct: 1   MAIGIVGRKCGMTRLFAEDGTSVPVTVVEAAPNRITQHRREDKDGYSAIQVTTGTRRPAR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGS-VFSPSYFTVGQLVDVTGMTIGKG 119
           V+KP  G  + V V   + L+EFR+ +  +     +       F VGQ VDVT  T GKG
Sbjct: 61  VNKPQAGHVAKVGVEMGRGLWEFRLPRGVETESSDNNELRVDQFVVGQRVDVTSRTKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRH+F    ATHG S+SHR+ GS G  QDPGRVFK K MAG +G  R TV+NLE+
Sbjct: 121 FAGTVKRHHFRTQDATHGNSLSHRAPGSIGQNQDPGRVFKGKAMAGHLGAVRRTVQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R L+++KG VPG+   + ++VR + K
Sbjct: 181 VRVDTERNLLIIKGAVPGSP-GADVVVRPAIK 211


>gi|291457202|ref|ZP_06596592.1| 50S ribosomal protein L3 [Bifidobacterium breve DSM 20213]
 gi|291381037|gb|EFE88555.1| 50S ribosomal protein L3 [Bifidobacterium breve DSM 20213]
          Length = 213

 Score =  254 bits (649), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 85/212 (40%), Positives = 118/212 (55%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R  ++ +KLGM+ V++  G  +PVT++ +    V   +T + +GY AVQ+G G      V
Sbjct: 4   RKALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKTEESDGYKAVQLGYGAIDPTKV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G F+   V+P++ L E R   D D    G   +   F  G  VDVTG T GKGF+
Sbjct: 64  TKPLAGHFAKAGVTPRRHLVEVRTD-DVDQFEAGQELAADLFEEGTEVDVTGTTKGKGFA 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F   R THG   + R  GS G    P R+ K K+MAGRMG    T +NL VVS
Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTATTQNLTVVS 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D + G+I +KG +PG  K   +LVR + K A
Sbjct: 183 ADVENGIIAIKGAIPGP-KGGIVLVRSAVKGA 213


>gi|37519654|ref|NP_923031.1| 50S ribosomal protein L3 [Gloeobacter violaceus PCC 7421]
 gi|42559594|sp|Q7NPH0|RL3_GLOVI RecName: Full=50S ribosomal protein L3
 gi|35210645|dbj|BAC88026.1| 50S ribosomal protein L3 [Gloeobacter violaceus PCC 7421]
          Length = 215

 Score =  254 bits (649), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 87/218 (39%), Positives = 121/218 (55%), Gaps = 3/218 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RKLGMT +++ EGR IPVTV+    C V   ++   +GY AVQ+G G A+ K 
Sbjct: 1   MSLGILGRKLGMTQIFDEEGRAIPVTVVEAGPCPVTQVKSEATDGYTAVQLGFGTAREKV 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G      +    +        D      G   +   F  GQLVDV G +IGKGF
Sbjct: 61  LTRPEVGHCKKAGLEAPVRHLREFRLPDSSQYTPGQQITVDLFAAGQLVDVVGTSIGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH+FG     HG S +HR+ GS G    PGRVF  K+M GRMG  RVTV+ L VV
Sbjct: 121 AGGQKRHHFGRGPMAHG-SKNHRAPGSIGAGTTPGRVFPGKRMPGRMGNERVTVRKLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
            V  +R +IL++G +PG +    +++  + KS    KG
Sbjct: 180 RVIPERNVILIQGGLPGVE-GGLLMISPA-KSVGRAKG 215


>gi|299143194|ref|ZP_07036274.1| 50S ribosomal protein L3 [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298517679|gb|EFI41418.1| 50S ribosomal protein L3 [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 210

 Score =  254 bits (649), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 90/208 (43%), Positives = 133/208 (63%), Gaps = 3/208 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT +++ EG+  PVTV+  +   VV  +T++ +GY AVQV  G  K + V+KP
Sbjct: 4   LIGKKIGMTQIFDEEGKVTPVTVIEAEPNVVVQKKTVEVDGYNAVQVATGFVKERRVNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           ++G F+   V  KK L EFR  ++ +   +G       F+VG+ +DVTG + GKG  G +
Sbjct: 64  LKGHFAKAGVECKKNLREFR-TEEVENYNIGDEIKVDLFSVGEFIDVTGTSKGKGTQGVI 122

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           +RH FG  R THG S  HR  G  G    PG+VFKN +MAG+MG  +VTV+NLEVV VD 
Sbjct: 123 RRHGFGRGRETHG-SKFHRMPGGMGAATYPGKVFKNHRMAGKMGNEQVTVQNLEVVRVDL 181

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
           ++ LILVKG +PG KK   + ++++ K+
Sbjct: 182 EKNLILVKGAIPGPKKG-IVTLKETVKA 208


>gi|262280225|ref|ZP_06058009.1| 50S ribosomal protein L3 [Acinetobacter calcoaceticus RUH2202]
 gi|262258003|gb|EEY76737.1| 50S ribosomal protein L3 [Acinetobacter calcoaceticus RUH2202]
          Length = 214

 Score =  254 bits (649), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+ +D  ++   +TL+ +GY AVQV  GE +   
Sbjct: 3   MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 62

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFRV + + +   VG       FTVGQ+VDVTG + GKG
Sbjct: 63  VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQVVDVTGQSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVTV+ LE+
Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VS+D +R +++VKG +PG+     ++VR + K+
Sbjct: 183 VSIDAERSVLVVKGAIPGSTGGD-VIVRPTIKA 214


>gi|325981805|ref|YP_004294207.1| 50S ribosomal protein L3 [Nitrosomonas sp. AL212]
 gi|325531324|gb|ADZ26045.1| 50S ribosomal protein L3 [Nitrosomonas sp. AL212]
          Length = 215

 Score =  254 bits (649), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 88/213 (41%), Positives = 128/213 (60%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GM  ++   G   PVTV+ + + ++   +    NGY A QV  G+ K+  
Sbjct: 1   MSLGLIGRKIGMMRIFTENGDAFPVTVIDVASNRITQIKKTSSNGYCAAQVSFGQKKISR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           V+KP  G  +   V     + EFRV+ D        G       F VGQ VD++G+TIGK
Sbjct: 61  VNKPTAGHCAKAGVIAGSIIREFRVKDDSILSSFQNGMEIKSDIFKVGQKVDISGITIGK 120

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GFSGA+K HNF   RA+HG S +H+  GS G  QDPGR+F  K+MA  MG  + T++NLE
Sbjct: 121 GFSGAIKLHNFSSNRASHGNSKAHKKTGSIGMAQDPGRIFPGKRMAAHMGNVKRTIQNLE 180

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           ++ +D +R L+LVKG +PG+ K+ +++VR S K
Sbjct: 181 ILRIDSERNLLLVKGAIPGS-KDGYVVVRSSVK 212


>gi|319893200|ref|YP_004150075.1| LSU ribosomal protein L3p (L3e) [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317162896|gb|ADV06439.1| LSU ribosomal protein L3p (L3e) [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323463752|gb|ADX75905.1| ribosomal protein L3 [Staphylococcus pseudintermedius ED99]
          Length = 219

 Score =  254 bits (649), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 92/220 (41%), Positives = 126/220 (57%), Gaps = 11/220 (5%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY A+Q+G        
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQIGFENKEAYK 60

Query: 54  -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
            G    K  +K   G     + +PK+ + EFR    DD   VG   S   F VG ++DVT
Sbjct: 61  KGRKTNKYATKAAEGHAKKADAAPKRFIREFRNVNVDD-YEVGQEVSVDTFEVGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G + GKGF GA+KRHN      +HG    HR+ GS G   D  RVFK +K+ GRMGGN V
Sbjct: 120 GTSKGKGFQGAIKRHNQSRGPMSHGSH-FHRAPGSIGMASDASRVFKGQKLPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           TV+NLEVV VD +  +ILVKG VPG KK  ++ ++ + K+
Sbjct: 179 TVQNLEVVQVDTENNVILVKGNVPGPKKG-FVQIQSAIKA 217


>gi|299768666|ref|YP_003730692.1| 50S ribosomal protein L3 [Acinetobacter sp. DR1]
 gi|298698754|gb|ADI89319.1| 50S ribosomal protein L3 [Acinetobacter sp. DR1]
          Length = 212

 Score =  254 bits (649), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+ +D  ++   +TL+ +GY AVQV  GE +   
Sbjct: 1   MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFRV + + +   VG       FTVGQ+VDVTG + GKG
Sbjct: 61  VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQVVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVTV+ LE+
Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VS+D +R +++VKG +PG+     ++VR + K+
Sbjct: 181 VSIDAERSVLVVKGAIPGSTGGD-VIVRPTIKA 212


>gi|322386354|ref|ZP_08059984.1| 50S ribosomal protein L3 [Streptococcus cristatus ATCC 51100]
 gi|321269578|gb|EFX52508.1| 50S ribosomal protein L3 [Streptococcus cristatus ATCC 51100]
          Length = 208

 Score =  254 bits (649), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 90/213 (42%), Positives = 130/213 (61%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGELIPVTVVEAAPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S + ++ + K+ 
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLVTIKSAVKAG 207


>gi|328543358|ref|YP_004303467.1| 50S ribosomal protein L3 [Polymorphum gilvum SL003B-26A1]
 gi|326413103|gb|ADZ70166.1| 50S ribosomal protein L3 [Polymorphum gilvum SL003B-26A1]
          Length = 227

 Score =  254 bits (649), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 127/205 (61%), Positives = 154/205 (75%), Gaps = 2/205 (0%)

Query: 11  GMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFS 70
           GMT +YN  G  +PVTVL L+ CQVV HRT +KNGY A+Q+GAG AKVKN  K MRG F+
Sbjct: 2   GMTRIYNDAGEHVPVTVLRLEKCQVVAHRTEEKNGYTALQLGAGAAKVKNTPKAMRGHFA 61

Query: 71  SVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
              V PK+ + EFRV +D +L+ VG+  +  ++  GQ VDVTG +IGKGF+G MKRHNFG
Sbjct: 62  VAKVEPKRTIAEFRVSQD-NLIDVGAEITADHYVAGQYVDVTGTSIGKGFAGVMKRHNFG 120

Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
           G RATHG S+SHRSHGSTG RQDPG+VFK KKMAG MG  RVT +NL+VV  D +RGLI+
Sbjct: 121 GGRATHGNSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDVRVTTQNLKVVRTDVERGLIM 180

Query: 191 VKGCVPGAKKNSWILVRDSFKSAVN 215
           V+G VPGA K  WILVRD+ K A+ 
Sbjct: 181 VEGSVPGA-KGGWILVRDAVKKALP 204


>gi|207723095|ref|YP_002253500.1| 50s ribosomal protein l3 [Ralstonia solanacearum IPO1609]
 gi|206588288|emb|CAQ18986.1| 50s ribosomal protein l3 [Ralstonia solanacearum IPO1609]
          Length = 209

 Score =  254 bits (649), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 87/202 (43%), Positives = 120/202 (59%), Gaps = 2/202 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V+  +G  IPVTVL +   +V   +T + +GY AVQV  G  +   V+KP+ G  + 
Sbjct: 1   MTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGSRRASRVTKPLAGHLAK 60

Query: 72  VNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
             V   + + EFR+       L +G       F+ GQ +DV G TIGKG++G +KR+NF 
Sbjct: 61  AGVEAGEIIAEFRIDAAKAAELKLGDTIDVDLFSAGQKIDVQGTTIGKGYAGTIKRYNFS 120

Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
             RA+HG S SH   GS G  QDPGRVF  K+M G MG    TV+NL +V VD +R L+L
Sbjct: 121 SGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVIVRVDAERKLLL 180

Query: 191 VKGCVPGAKKNSWILVRDSFKS 212
           VKG VPGA K+ +++V  + K+
Sbjct: 181 VKGAVPGA-KSGFVVVSPAVKA 201


>gi|33564555|emb|CAE43871.1| 50S ribosomal protein L3 [Bordetella pertussis Tohama I]
          Length = 214

 Score =  254 bits (649), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 92/212 (43%), Positives = 124/212 (58%), Gaps = 3/212 (1%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           + RK+GMT ++  +G  IPVTVL + N +V   ++L+ +GY A+QV  G  +   V KP 
Sbjct: 1   MGRKVGMTRIFTEDGESIPVTVLDVSNNRVTQVKSLESDGYAAIQVTYGTRRATRVVKPQ 60

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP--SYFTVGQLVDVTGMTIGKGFSGA 123
            G ++         L EFR+                 S F  GQ VDVTG +IGKGF+G 
Sbjct: 61  AGHYAKAGAEAGSILKEFRLDPARAAEFAAGAVIAVESVFEAGQQVDVTGTSIGKGFAGT 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KRHNFG  RA+HG S SHR  GS G  QDPGR+F  K+M+G MG    TV+NL+VV VD
Sbjct: 121 IKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMSGHMGDVTRTVQNLDVVRVD 180

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            +RGL++VKG VPG      ++VR + K+   
Sbjct: 181 AERGLLMVKGAVPG-HAGGDVIVRPAVKAPAK 211


>gi|254303420|ref|ZP_04970778.1| ribosomal protein L3 [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148323612|gb|EDK88862.1| ribosomal protein L3 [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 211

 Score =  254 bits (649), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT ++  +G+ +PVTV+      V+  +T +K+GY+A+Q+G  E K KN +
Sbjct: 2   SGILGKKIGMTQIF-EDGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   V P++ + E  V+  D    +G           Q VD+TG + GKG SG
Sbjct: 61  KPLMGIFNKAGVKPQRFVKELEVESVDG-YELGQEIKVDVLAEVQYVDITGTSKGKGTSG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGG RA+HGVS +HR  GS G    PG+V K K+MAG+ G   VTV+NL+VV V
Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D +  L+L+KG VPGA KN ++++R + K  +
Sbjct: 180 DAEHNLLLIKGAVPGA-KNGYLVIRPAVKKVI 210


>gi|50086215|ref|YP_047725.1| 50S ribosomal protein L3 [Acinetobacter sp. ADP1]
 gi|81827372|sp|Q6F7R2|RL3_ACIAD RecName: Full=50S ribosomal protein L3
 gi|49532191|emb|CAG69903.1| 50S ribosomal protein L3 [Acinetobacter sp. ADP1]
          Length = 212

 Score =  253 bits (648), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+ +D  ++   +TL+ +GY AVQV  GE +   
Sbjct: 1   MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFRV + + +   +G       FTVGQ+VDVTG + GKG
Sbjct: 61  VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVTV+ LE+
Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VS+D +R +++VKG +PGA     ++VR + K+
Sbjct: 181 VSIDAERSVLVVKGAIPGATGGD-VIVRPTIKA 212


>gi|296137306|ref|YP_003644548.1| 50S ribosomal protein L3 [Thiomonas intermedia K12]
 gi|295797428|gb|ADG32218.1| 50S ribosomal protein L3 [Thiomonas intermedia K12]
          Length = 220

 Score =  253 bits (648), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 98/213 (46%), Positives = 134/213 (62%), Gaps = 2/213 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
             G+V RK+GMT V+  +G  I VTVL     +V   RT D +GY AVQV  G  K   +
Sbjct: 5   SMGLVTRKVGMTRVFTDDGASIAVTVLDASGNRVSQVRTQDVDGYSAVQVAYGSRKPSRL 64

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +K   G  +   V P + L EF +  +      +G+    S F VGQ+VD  G++IGKGF
Sbjct: 65  TKGQAGHLAKAGVEPAEILKEFDLPAEKAADYALGATVPASLFQVGQMVDAQGVSIGKGF 124

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G++KRHNF   RA+HG S++ R+ GS G  QDPGRVF  K+MAG+MG   VTV+NLEVV
Sbjct: 125 AGSIKRHNFSSNRASHGNSVTTRAPGSIGMAQDPGRVFPGKRMAGQMGNETVTVQNLEVV 184

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +D+ R LILVKG VPG+ ++ ++ +R + KSA
Sbjct: 185 RIDEARQLILVKGAVPGS-RSGFVFLRPAVKSA 216


>gi|311896570|dbj|BAJ28978.1| putative ribosomal protein L3 [Kitasatospora setae KM-6054]
          Length = 215

 Score =  253 bits (648), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 95/211 (45%), Positives = 124/211 (58%), Gaps = 3/211 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVKNV 61
            G++  KLGMT V++   R +PVTV+      V    T D   GY AVQ+G GE   + V
Sbjct: 6   KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVHTADSPAGYDAVQIGFGEIDPRKV 65

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP++G F+   V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+
Sbjct: 66  NKPLQGHFAKAGVTPRRHLVELR-TADASEYTLGQEITAELFEAGVKVDVTGTSKGKGFA 124

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF GL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +
Sbjct: 125 GVMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGHERVTTQNLTVHA 184

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VD ++GL+L+KG +PG      +LVR + K 
Sbjct: 185 VDAEKGLLLIKGAIPGPN-GGLVLVRTAAKG 214


>gi|225621028|ref|YP_002722286.1| 50S ribosomal protein L3 [Brachyspira hyodysenteriae WA1]
 gi|254803657|sp|C0QVZ6|RL3_BRAHW RecName: Full=50S ribosomal protein L3
 gi|225215848|gb|ACN84582.1| 50S ribosomal protein L3 [Brachyspira hyodysenteriae WA1]
          Length = 217

 Score =  253 bits (648), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 86/219 (39%), Positives = 122/219 (55%), Gaps = 3/219 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +KLGMT V++  G  I VTV+    C V+  R  +K+GY A+Q+G G  K K++ 
Sbjct: 2   VGIIGKKLGMTTVFDETGNAIAVTVVEAGPCTVMQIRDNEKDGYSAIQLGYGAVKEKHLK 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F   N+ PKK L EFR+  D     VG       F  G  +DV+ ++ G+GF+G
Sbjct: 62  KPQIGQFKKANLEPKKYLKEFRMD-DASSYTVGQELKADIFQAGDFIDVSSLSKGRGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHN+ G   +HG S   R  GS GC   P RV+K K M G MG    T++NL+VV +
Sbjct: 121 VMKRHNYDGGPMSHG-SNFRRRAGSIGCNSYPARVWKGKGMPGHMGNTLTTIQNLKVVEI 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
                LI++KG +PGA  NS + +  + K     K  ++
Sbjct: 180 RPDDNLIMIKGAIPGAI-NSIVKLTSAVKKRNKKKNSMN 217


>gi|237736170|ref|ZP_04566651.1| LSU ribosomal protein L3P [Fusobacterium mortiferum ATCC 9817]
 gi|229421723|gb|EEO36770.1| LSU ribosomal protein L3P [Fusobacterium mortiferum ATCC 9817]
          Length = 208

 Score =  253 bits (648), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 92/210 (43%), Positives = 134/210 (63%), Gaps = 3/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++A+K+GMT ++  +G+ IPVTV+      V+  +T++ +GY A+Q+G  E K KN +
Sbjct: 2   SGILAKKIGMTQIF-EDGKFIPVTVVEAGPNFVLQKKTVENDGYTALQLGFDEKKEKNTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    V+P++ + E RV    +   +G           + VD+TG + GKG SG
Sbjct: 61  KPVMGIFKKAGVNPQRFVKELRVDS-VEGYELGQEIKVDVLAGVEFVDITGTSKGKGTSG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGG RA+HGVS +HR  GS G    PG+V K K+MAG+ G   VTV+NL+VV V
Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSTWPGKVLKGKRMAGQYGNETVTVQNLKVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +  L+L+KG VPG+ KNS+I+V+ + K 
Sbjct: 180 DAENNLLLIKGAVPGS-KNSYIVVKPAVKK 208


>gi|145256427|ref|XP_001401384.1| 54S ribosomal protein L9 [Aspergillus niger CBS 513.88]
 gi|134058285|emb|CAK38476.1| unnamed protein product [Aspergillus niger]
          Length = 305

 Score =  253 bits (648), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 98/215 (45%), Positives = 139/215 (64%), Gaps = 3/215 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +  K GMT +Y+   G+R+P TVL LD  +VV H+T  K+GY AVQ+GAG  +  
Sbjct: 79  LRTGAITFKKGMTALYDPETGKRVPCTVLQLDRVEVVSHKTRQKHGYYAVQLGAGWRRPD 138

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           N++K + G F++  +SPK+ ++EFRV+ +  LLPVG   S  +F  GQ VD    T GKG
Sbjct: 139 NLTKSLLGHFTANGISPKRHVYEFRVKDESGLLPVGQTVSADWFQEGQFVDARSDTKGKG 198

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKRH FGG   +HGVS++HRS GS G  Q  G RV+  KKMAG MG  + TV+NL 
Sbjct: 199 FAGVMKRHGFGGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLR 258

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           ++ VD + G+++V G V G  K   + ++D+ K  
Sbjct: 259 ILKVDAENGIVVVNGSVSGP-KGCVVRIQDAIKKP 292


>gi|219666490|ref|YP_002456925.1| 50S ribosomal protein L3 [Desulfitobacterium hafniense DCB-2]
 gi|219536750|gb|ACL18489.1| ribosomal protein L3 [Desulfitobacterium hafniense DCB-2]
          Length = 209

 Score =  253 bits (648), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 93/212 (43%), Positives = 129/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+  EG  IPVTV+    C V+  +T   +GY A+QVG G  + + 
Sbjct: 1   MSKGILGKKVGMTQVFTEEGHLIPVTVVEAGPCYVIQKKTKATDGYNAIQVGFGALRERL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  +V P + + EFRV  D D   +G   +   F  G  VDV G++ GKGF
Sbjct: 61  ANKPQKGHVAKASVKPMRYIREFRVD-DVDAYEIGQEITAEVFAAGDAVDVVGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH  G     HG S  HR  GS G +  P RVFK + + GRMGG RVTV+NL+VV
Sbjct: 120 AGMIKRHGAGRGPMKHG-SKYHRRTGSLGAKG-PARVFKGRNLPGRMGGERVTVQNLKVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  + +ILVKG VPGAKK S ++++ S K+
Sbjct: 178 RVDADKNMILVKGAVPGAKK-SLLILKPSVKA 208


>gi|269976879|ref|ZP_06183853.1| 50S ribosomal protein L3 [Mobiluncus mulieris 28-1]
 gi|306819491|ref|ZP_07453198.1| 50S ribosomal protein L3 [Mobiluncus mulieris ATCC 35239]
 gi|269934710|gb|EEZ91270.1| 50S ribosomal protein L3 [Mobiluncus mulieris 28-1]
 gi|304647783|gb|EFM45101.1| 50S ribosomal protein L3 [Mobiluncus mulieris ATCC 35239]
          Length = 218

 Score =  253 bits (648), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 89/210 (42%), Positives = 130/210 (61%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
             ++ RKLGMT V++ EG+ +PVTV+ ++   V   RT +++GY A+Q+G G+   + V+
Sbjct: 10  KALLGRKLGMTQVWDEEGKLVPVTVVEVEKNVVTDIRTPERDGYTALQLGFGQLDERKVT 69

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KPM G F+   V+P++ L E R   D D   +G       F  G LVDVTG T GKGF+G
Sbjct: 70  KPMAGHFAKSGVTPRRHLAEVRTT-DADSYELGQELGADLFETGALVDVTGNTKGKGFAG 128

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ ++HG   +HR  GS G    PGRVF+   MAGRMGG R T+ NL+V ++
Sbjct: 129 VMKRHGFQGVSSSHGAHRNHRKPGSIGACATPGRVFRGLNMAGRMGGERRTIMNLKVQAI 188

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D  +GL+++ G +PG  K   +++R + K 
Sbjct: 189 DADKGLVVIAGAIPGP-KGGIVMIRSAVKG 217


>gi|329114217|ref|ZP_08242979.1| 50S ribosomal protein L3 [Acetobacter pomorum DM001]
 gi|326696293|gb|EGE47972.1| 50S ribosomal protein L3 [Acetobacter pomorum DM001]
          Length = 238

 Score =  253 bits (648), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 128/219 (58%), Positives = 165/219 (75%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+KLGM+ ++  +G  +PVTVLH+D+ QVV  R  +++GY+AVQ+G G+AKVKN
Sbjct: 12  MRTGLIAKKLGMSRLFKEDGTHVPVTVLHVDDVQVVDVRNQERDGYVAVQLGMGKAKVKN 71

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP RG F+   V PK+ L EFRV  DD  L VG+  S S+F VGQ VDVTG++ GKGF
Sbjct: 72  VTKPNRGHFARTKVEPKQALREFRV-ADDAALEVGATLSASHFVVGQKVDVTGVSKGKGF 130

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NF GL ATHGVSISHRSHGSTG RQDPG+ FKNKKMAG +G  RVT  NLE+ 
Sbjct: 131 AGAMKRWNFAGLEATHGVSISHRSHGSTGNRQDPGKTFKNKKMAGHLGDERVTTLNLEIA 190

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           +VD ++ LI+V+G VPGA KN  +L+RD+ K A +    
Sbjct: 191 AVDPEKNLIMVRGSVPGA-KNGVVLIRDAIKKARHDDAP 228


>gi|320531960|ref|ZP_08032861.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320135827|gb|EFW27874.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 222

 Score =  253 bits (648), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 91/209 (43%), Positives = 129/209 (61%), Gaps = 2/209 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++  KLGMT +++  G   PVTV+ +D   V   RT++ +GY AVQ+  G+   + V+KP
Sbjct: 16  LLGTKLGMTQIWDENGVLRPVTVVRVDTNVVTQVRTIETDGYEAVQLAFGDIDARKVTKP 75

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + G F+ V V P++ + E R     +  P G   +   F VGQLVDVTG + GKGF+G M
Sbjct: 76  LAGHFAKVGVEPRRHVAEIRTSLASEFTP-GQELAADTFEVGQLVDVTGTSKGKGFAGVM 134

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH F G+ A+HG   +HR  GS G    PGR+FK  +MAGRMG  R TV+NL++  VD 
Sbjct: 135 KRHGFAGVGASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGHARRTVQNLKIRGVDV 194

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +G++LV G +PG  K S ++VR + K A
Sbjct: 195 DKGVLLVNGAIPGP-KGSVVVVRTAVKGA 222


>gi|262370578|ref|ZP_06063903.1| 50S ribosomal protein L3 [Acinetobacter johnsonii SH046]
 gi|262314378|gb|EEY95420.1| 50S ribosomal protein L3 [Acinetobacter johnsonii SH046]
          Length = 214

 Score =  253 bits (648), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 95/213 (44%), Positives = 133/213 (62%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT ++   G  +PVTV+ +D  ++   +TL+ +GY A+Q+  GE +   
Sbjct: 3   MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAIQITTGERRESR 62

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFR-VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFR  + D +   VG       FTVGQ+VDVTG + GKG
Sbjct: 63  VTNAQKGHFAKAGVAAGRLVQEFRATEADLEGREVGGTIGVDMFTVGQVVDVTGQSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVTV+ LE+
Sbjct: 123 FQGGVKRWNFRTQDATHGNSLSHRVLGSTGQNQTPGRVFKGKKMAGHLGAERVTVQGLEI 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VS+D +R +++VKG +PGA     + VR + K+
Sbjct: 183 VSIDAERSVLVVKGAIPGATGGD-VTVRPTIKA 214


>gi|226953871|ref|ZP_03824335.1| 50S ribosomal protein L3 [Acinetobacter sp. ATCC 27244]
 gi|294651634|ref|ZP_06728938.1| 50S ribosomal protein L3 [Acinetobacter haemolyticus ATCC 19194]
 gi|226835354|gb|EEH67737.1| 50S ribosomal protein L3 [Acinetobacter sp. ATCC 27244]
 gi|292822483|gb|EFF81382.1| 50S ribosomal protein L3 [Acinetobacter haemolyticus ATCC 19194]
          Length = 214

 Score =  253 bits (648), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT V+   G  +PVTV+ +D  ++   +TL+ +GY A+QV  GE +   
Sbjct: 3   MAIGLVGRKCGMTRVFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAIQVTTGERRESR 62

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + + EFRV + + +   VG       FTVGQ+VDVTG + GKG
Sbjct: 63  VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGSIGVDLFTVGQIVDVTGQSKGKG 122

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF    ATHG S+SHR  GSTG  Q PGRVFK KKMAG +G  RVTV+ LE+
Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VS+D +R +++VKG +PG+     ++VR + K+
Sbjct: 183 VSIDAERSVLVVKGAIPGSTGGD-VIVRPTIKA 214


>gi|119502924|ref|ZP_01625009.1| 50S ribosomal protein L3 [marine gamma proteobacterium HTCC2080]
 gi|119461270|gb|EAW42360.1| 50S ribosomal protein L3 [marine gamma proteobacterium HTCC2080]
          Length = 211

 Score =  253 bits (648), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 98/212 (46%), Positives = 129/212 (60%), Gaps = 1/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK GMT V+  EG  +PVTV+ +   +V   + L+ +GY A+QV  G+ K   
Sbjct: 1   MTIGIVGRKSGMTRVFTDEGVSVPVTVVEVLPNRVTQIKDLETDGYRAIQVTTGDRKASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKP  G ++    +    L+EFR+   ++   VGS  +   F  GQ VDV G + GKGF
Sbjct: 61  VSKPAAGHYAKAGTAAGDGLWEFRLDGSEETFEVGSELTVERFEQGQKVDVAGRSKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR NF    ATHG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT + LEVV
Sbjct: 121 QGAVKRWNFSMQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQGLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +D +R L+L+KG VPGA     ++VR + K 
Sbjct: 181 RIDSERNLLLIKGAVPGAP-GGHVIVRPTVKG 211


>gi|254412263|ref|ZP_05026038.1| ribosomal protein L3 [Microcoleus chthonoplastes PCC 7420]
 gi|196181229|gb|EDX76218.1| ribosomal protein L3 [Microcoleus chthonoplastes PCC 7420]
          Length = 211

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 93/211 (44%), Positives = 128/211 (60%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT V++ EGR +PVTV+    C+V   +T   +GY AVQ+G  E K K 
Sbjct: 1   MSVGILGTKLGMTQVFDEEGRALPVTVVQAGPCRVTQIKTKQTDGYSAVQLGYHEVKEKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G  +     P + L E+R+   D+   +G V +   F+ GQLVDV+G TIG+GF
Sbjct: 61  VNKPEKGHLAKSEAPPLRHLREYRLDNTDE-FQLGQVINAEIFSAGQLVDVSGNTIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRHNF      HG S +HR  GSTG    PGR F  KKMAGR GG R T++ L+VV
Sbjct: 120 AGYQKRHNFKRGPMAHG-SKNHRLPGSTGAGTTPGRTFPGKKMAGRYGGKRQTIRKLQVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L+++KG VPG    + + +  + K
Sbjct: 179 RVDTERNLLIIKGAVPGKP-GALLNIAPTNK 208


>gi|303240971|ref|ZP_07327482.1| 50S ribosomal protein L3 [Acetivibrio cellulolyticus CD2]
 gi|302591557|gb|EFL61294.1| 50S ribosomal protein L3 [Acetivibrio cellulolyticus CD2]
          Length = 212

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 94/214 (43%), Positives = 132/214 (61%), Gaps = 4/214 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++  K+GMT ++N  G  IPVTV+    C V+  +T++ +GY AV+VG  +A  K 
Sbjct: 1   MKKFILGTKIGMTQIFNEAGLAIPVTVIQAGPCTVIQKKTVETDGYGAVKVGFADANEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119
           ++KP +G FS + V+PKK + EFR   D D    G        F  G+ +DVTG++ GKG
Sbjct: 61  LNKPQKGQFSKLKVAPKKYIREFRAD-DFDKYEAGQEIKVADMFENGEKIDVTGISKGKG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKRH       THG S+ HR  GS G    P RVFK KK+ G MG  RVTV+NL++
Sbjct: 120 FAGVMKRHGHKTGPLTHG-SMYHRRVGSMGANTSPARVFKGKKLPGHMGVERVTVQNLDI 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V VD +R L+LVKG VPGA K   ++++++ KS 
Sbjct: 179 VRVDAERNLLLVKGAVPGA-KGGLVIIKNTVKSG 211


>gi|306821620|ref|ZP_07455218.1| 50S ribosomal protein L3 [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304550365|gb|EFM38358.1| 50S ribosomal protein L3 [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 207

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 91/209 (43%), Positives = 119/209 (56%), Gaps = 3/209 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
             ++ +KLGMT ++  +GR IPVTV+      V   +T + +GY AVQ   GE K KNV+
Sbjct: 2   KAIMGKKLGMTQIFAEDGRLIPVTVIEAGPMVVTQIKTKENDGYEAVQCAYGEIKEKNVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F    V  K+ L EF+V    D    G   +   F VG  VD    + GKGF G
Sbjct: 62  KPLKGHFKKAGVGSKRHLREFKVANIADYQLAG-EINVDVFAVGDKVDAVATSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRH       THG    HR  GS G   DP RVFK KK+AG MG  R T+KNLEVV V
Sbjct: 121 PIKRHGQSRGPETHGSH-YHRGPGSMGMCSDPSRVFKGKKLAGHMGFERTTIKNLEVVLV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D  + L+LVKG VPG KK   ++++++ K
Sbjct: 180 DKDKNLVLVKGSVPGPKKG-LVILKEAHK 207


>gi|163752917|ref|ZP_02160041.1| 50S ribosomal protein L3 [Kordia algicida OT-1]
 gi|161326649|gb|EDP97974.1| 50S ribosomal protein L3 [Kordia algicida OT-1]
          Length = 205

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 86/206 (41%), Positives = 125/206 (60%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C V   RT + +GY A+Q+G  +   K  S
Sbjct: 2   SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTNEVDGYEALQLGFDDKAEKRAS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F     SPK K+ EF+  +  +   +G   +  +F  G+ VDV G + GKGF G
Sbjct: 62  KAANGHFKKAGTSPKYKVVEFQGFE--EEYKLGDSITVEHFEEGEFVDVAGTSKGKGFQG 119

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG  +ATHG     R+ GS G    P RVFK  +MAGRMGG +V V+NL V+ 
Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGEKVKVQNLRVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L++VKGCVPG  KN++++V+
Sbjct: 180 VVPEKNLLVVKGCVPG-HKNAYVIVQ 204


>gi|163815975|ref|ZP_02207345.1| hypothetical protein COPEUT_02155 [Coprococcus eutactus ATCC 27759]
 gi|158448785|gb|EDP25780.1| hypothetical protein COPEUT_02155 [Coprococcus eutactus ATCC 27759]
          Length = 227

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 87/229 (37%), Positives = 124/229 (54%), Gaps = 19/229 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A+K+GMT +++  G   PVTVL    C V   +T++ +GY A+QVG GE K + 
Sbjct: 1   MKKAILAKKVGMTQIFDENGVLTPVTVLQAGPCVVTQIKTVENDGYDAIQVGFGEKKERV 60

Query: 61  VSK----------------PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
            +K                   G       +PK    EFR++   +   +G+      F 
Sbjct: 61  TTKDVSGKKVIRNPHGAGKAEVGHAKKAGTTPKTFYREFRLENTAE-YELGAEIKADVFA 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  +DVT  + GKG++G +KRH      + HG S  HR  GS G    PGRVFK KKM 
Sbjct: 120 AGDKIDVTAKSKGKGYAGGLKRHGLKSGPSGHG-SKYHRHAGSNGSATTPGRVFKGKKMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           G MG  RVT++NLEVV +D +  +ILVKG VPG KK S ++++D+ KS 
Sbjct: 179 GHMGNVRVTIQNLEVVKIDVENNVILVKGAVPGPKK-SLVMIKDTVKSG 226


>gi|119025339|ref|YP_909184.1| 50S ribosomal protein L3 [Bifidobacterium adolescentis ATCC 15703]
 gi|154486747|ref|ZP_02028154.1| hypothetical protein BIFADO_00572 [Bifidobacterium adolescentis
           L2-32]
 gi|166233119|sp|A1A069|RL3_BIFAA RecName: Full=50S ribosomal protein L3
 gi|118764923|dbj|BAF39102.1| 50S ribosomal protein L3 [Bifidobacterium adolescentis ATCC 15703]
 gi|154084610|gb|EDN83655.1| hypothetical protein BIFADO_00572 [Bifidobacterium adolescentis
           L2-32]
          Length = 213

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 83/212 (39%), Positives = 122/212 (57%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+ ++ +KLGM+ V++  G  +PVT++ +    V   ++ + +GY AVQ+G G+     V
Sbjct: 4   RTALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKSEESDGYKAVQLGYGQVDPTKV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G F+   V+P++ L E R    ++  P G   +   F  G LVDVTG T GKGF+
Sbjct: 64  TKPLAGHFAKAGVTPRRHLAEVRTDNAEEFEP-GQELTAELFPEGTLVDVTGTTKGKGFA 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F   R THG   + R  GS G    P R+ K K+MAGRMG    T  NL +VS
Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTNTALNLTIVS 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D + G++ +KG +PG  K S +LVR + K A
Sbjct: 183 SDVENGVLAIKGAIPGP-KGSIVLVRSAVKGA 213


>gi|320199504|gb|EFW74094.1| LSU ribosomal protein L3p (L3e) [Escherichia coli EC4100B]
          Length = 199

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 91/201 (45%), Positives = 126/201 (62%), Gaps = 2/201 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K   V+KP  G F+ 
Sbjct: 1   MTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTKPEAGHFAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G +KR NF  
Sbjct: 61  AGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAGTVKRWNFRT 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
             ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV VD +R L+LV
Sbjct: 120 QDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAERNLLLV 179

Query: 192 KGCVPGAKKNSWILVRDSFKS 212
           KG VPGA   S ++V+ + K+
Sbjct: 180 KGAVPGA-TGSDLIVKPAVKA 199


>gi|288917230|ref|ZP_06411599.1| ribosomal protein L3 [Frankia sp. EUN1f]
 gi|288351421|gb|EFC85629.1| ribosomal protein L3 [Frankia sp. EUN1f]
          Length = 237

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 95/212 (44%), Positives = 124/212 (58%), Gaps = 2/212 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      V   +T D +GY AVQ+G GE   + ++K
Sbjct: 8   GLLGTKLGMTQVWDANNRVVPVTVIQAGPNVVTQVKTTDNDGYSAVQLGFGEIDPRRINK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+RG F +  V+P++ L E R   D      G   +   F  GQ+VDVTG + GKGF+G 
Sbjct: 68  PLRGHFETSGVTPRRHLVELR-TADAGNYRAGQELTGELFDAGQVVDVTGTSKGKGFAGV 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GL A HGV   HRS GS G    PGRVFK  +MAGRMG  RVTV  L + +VD
Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGHARVTVAGLTIHAVD 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            +RG +L+KG VPG      + VR + K    
Sbjct: 187 TERGFLLIKGAVPGPD-GGLVFVRSAAKRPAP 217


>gi|221632978|ref|YP_002522201.1| 50S ribosomal protein L3 [Thermomicrobium roseum DSM 5159]
 gi|254803699|sp|B9KZY7|RL3_THERP RecName: Full=50S ribosomal protein L3
 gi|221155754|gb|ACM04881.1| ribosomal protein L3 [Thermomicrobium roseum DSM 5159]
          Length = 214

 Score =  253 bits (647), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 102/211 (48%), Positives = 129/211 (61%), Gaps = 5/211 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RKLGMT +++ EGR IPVTVL +  C V   +T D++GY AVQ+G G  K   
Sbjct: 1   MIEGLLGRKLGMTQIFDDEGRAIPVTVLEVGPCVVTQVKTSDRDGYQAVQLGFGHRK--R 58

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            ++PM+G   +   SP + L E RV  D     VG V   + F  GQLVDV G   G+GF
Sbjct: 59  QNRPMQGHLRASGASP-RYLKEVRVD-DATRFQVGQVIDCTIFQPGQLVDVIGWRKGRGF 116

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH F G   THG S  HR+ GS G   DPGRV K K+MAGRMG  RVTV+NL V 
Sbjct: 117 QGGVKRHGFAGGPKTHGQSDRHRAPGSIGPTTDPGRVHKGKRMAGRMGPVRVTVQNLRVE 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L+LV+G VPG   N  ++VR + K
Sbjct: 177 RVDPQRNLVLVRGAVPG-HPNGLVIVRYAVK 206


>gi|238928155|ref|ZP_04659915.1| ribosomal protein L3 [Selenomonas flueggei ATCC 43531]
 gi|238884115|gb|EEQ47753.1| ribosomal protein L3 [Selenomonas flueggei ATCC 43531]
          Length = 220

 Score =  253 bits (647), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 97/219 (44%), Positives = 131/219 (59%), Gaps = 5/219 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +   ++ RKLGMT ++  EGR +PVTV+   N  V+  +T++ +GY AVQ+G G+ K KN
Sbjct: 4   LAKAILGRKLGMTQIFTEEGRVVPVTVVESGNNFVLRSKTVESDGYNAVQIGFGDIKEKN 63

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F    V   + + E R+    +   VG       F  G LVDV G + GKGF
Sbjct: 64  VTKPLKGQFEKAGVKAVRFIREMRLSAPSE-YNVGDTIGVDIFAAGDLVDVVGTSKGKGF 122

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KRHNF      HG S SHR  GSTG       GRV K KK+ GRMGG RVTV+ L 
Sbjct: 123 AGGIKRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLT 181

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           VV VD  R LIL+KG +PG KK  +++++D+ K A   K
Sbjct: 182 VVRVDADRNLILIKGAIPGPKKG-FVVIKDTVKPAKAAK 219


>gi|328958728|ref|YP_004376114.1| 50S ribosomal protein L3 [Carnobacterium sp. 17-4]
 gi|328675052|gb|AEB31098.1| 50S ribosomal protein L3 [Carnobacterium sp. 17-4]
          Length = 210

 Score =  253 bits (647), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 90/213 (42%), Positives = 125/213 (58%), Gaps = 4/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+   G  IPVTV+      V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGKKVGMTQVFTESGELIPVTVIEATPNVVLQVKTIETDGYEAVQLGYQDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP  G  +  N +PK+ + EF    +     VG       F  G +V+VTG T GKGF
Sbjct: 61  SNKPAMGHVAKANATPKRFIREFD-DVELGDYEVGQEVKVDAFKAGDIVNVTGTTKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       +HG S  HR  GS G   DP RVFK   + GRMGGNRVT+KNLEVV
Sbjct: 120 QGVIKRHGHSRGPMSHG-SRHHRRPGSMGPV-DPNRVFKRTLLPGRMGGNRVTIKNLEVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            VD ++ +IL+KG VPG+KK S I ++ +F+ A
Sbjct: 178 RVDVEKNVILIKGNVPGSKK-SLIQIKSAFQKA 209


>gi|295694837|ref|YP_003588075.1| 50S ribosomal protein L3 [Bacillus tusciae DSM 2912]
 gi|295410439|gb|ADG04931.1| 50S ribosomal protein L3 [Bacillus tusciae DSM 2912]
          Length = 210

 Score =  253 bits (647), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 91/213 (42%), Positives = 130/213 (61%), Gaps = 4/213 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RKLGMT V+  +GR +PVTV+    C V+  +T++ +GY+A+Q+G  + K +  +
Sbjct: 2   KGILGRKLGMTQVFREDGRVVPVTVIEAGPCIVLQKKTVETDGYVAIQLGFADKKGRRAN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +P  G  +    +PKK + E R   D     VG       F  G+LVDVTG + GKG++G
Sbjct: 62  RPETGHAAKSGATPKKYIREIR-NVDIAKYEVGQELRADVFAPGELVDVTGTSKGKGYAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHN       HG S  HR  GS G    P RVFK + + GRMGG RVTV+NLEV+  
Sbjct: 121 TIKRHNQARGPMAHG-SKYHRGVGSLGSIA-PNRVFKGQTLPGRMGGERVTVQNLEVIQA 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           D +R L+LVKG VPG  +NS+++V+ + K+AV 
Sbjct: 179 DPERNLLLVKGAVPGP-RNSYVIVKSAVKAAVK 210


>gi|160942901|ref|ZP_02090140.1| hypothetical protein FAEPRAM212_00377 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445802|gb|EDP22805.1| hypothetical protein FAEPRAM212_00377 [Faecalibacterium prausnitzii
           M21/2]
 gi|295103925|emb|CBL01469.1| LSU ribosomal protein L3P [Faecalibacterium prausnitzii SL3/3]
          Length = 210

 Score =  253 bits (647), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 125/212 (58%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT +++  G+ IPVTV+    C VV  +T++ +GY AVQ+G GE   K 
Sbjct: 1   MVKGIIGKKVGMTQLFDESGKVIPVTVIEAGPCTVVQKKTVESDGYQAVQLGFGEVSAKK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F   NV+PKK L EFR+  D   + VG +     F  G  VDV G++ GKG+
Sbjct: 61  VNKAAAGHFKKANVAPKKTLREFRLD-DVSAMNVGDILKADVFAAGDKVDVAGVSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR     LR +HG     R  GS G   +P RVF  K++ G MG  RVTV+NL VV
Sbjct: 120 QGVIKRFGQHRLRESHGTGPVARHAGSMGAISNPSRVFPGKRLPGHMGCVRVTVQNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  LI VKG VPG+ K + I + +S K+
Sbjct: 180 KVDTENNLIAVKGAVPGS-KGTIITLANSVKA 210


>gi|116671521|ref|YP_832454.1| 50S ribosomal protein L3 [Arthrobacter sp. FB24]
 gi|171855202|sp|A0JZ84|RL3_ARTS2 RecName: Full=50S ribosomal protein L3
 gi|116611630|gb|ABK04354.1| LSU ribosomal protein L3P [Arthrobacter sp. FB24]
          Length = 216

 Score =  253 bits (647), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 92/211 (43%), Positives = 125/211 (59%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   + IPVTV+  D+  +   R  D +GY+AVQ+G G+   + V+
Sbjct: 8   KGLLGTKLGMTQVWDENNKLIPVTVVQADSNVITQLRNADVDGYVAVQIGYGQIDPRKVT 67

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    V+P++ + E R   D     +G   S   F  GQ +DV G T GKGF+G
Sbjct: 68  KPLAGHFEKAGVTPRRHVVELR-TADAAEYELGQELSVEVFEAGQKIDVVGTTKGKGFAG 126

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    P RVFK  KMAGRMG  R T  NL V +V
Sbjct: 127 VMKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGMKMAGRMGAVRHTTLNLTVHAV 186

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++ L+L+KG VPGA +   +LVR + K A
Sbjct: 187 DVEKSLLLIKGAVPGA-RGQVVLVRTAVKGA 216


>gi|329901062|ref|ZP_08272688.1| LSU ribosomal protein L3p (L3e) [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327549262|gb|EGF33840.1| LSU ribosomal protein L3p (L3e) [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 218

 Score =  253 bits (647), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 90/212 (42%), Positives = 126/212 (59%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GM  ++  +G  IPVTV+ + N +V   +T + +GY +VQV  G+ +   
Sbjct: 1   MSLGLVGRKVGMMRIFTDDGDSIPVTVVDVSNNRVTQIKTPETDGYTSVQVAFGQRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQK-DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V++   G  +   V     L EFR+       +  G + + S F VGQ VDV G++IGKG
Sbjct: 61  VNQATAGHHAKAGVEAGTVLKEFRIDAVKASEMKAGDIVAASLFEVGQKVDVQGISIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RATHG S SH   GS G  QDPGRVF  K+M G MG   VT +NLE+
Sbjct: 121 YAGVIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTTQNLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             +D  R L+L+KG VPGA KN  ++V  + K
Sbjct: 181 ARIDADRQLLLIKGAVPGA-KNGKVVVSPAVK 211


>gi|319948723|ref|ZP_08022844.1| 50S ribosomal protein L3 [Dietzia cinnamea P4]
 gi|319437625|gb|EFV92624.1| 50S ribosomal protein L3 [Dietzia cinnamea P4]
          Length = 221

 Score =  253 bits (647), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 88/216 (40%), Positives = 120/216 (55%), Gaps = 3/216 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   R +PVTV+    C V   RT + +GY AVQ+  G    + V+
Sbjct: 7   KGILGAKLGMTQVFDENNRVVPVTVVKAGPCVVTGIRTEENDGYNAVQIAFGAVDPRKVT 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           KP+ G F    V+P++ + E R+   +      +G       F  G  VDVTG + GKGF
Sbjct: 67  KPVAGQFEKAGVTPRRHIAEIRLDNAEQAAGYEIGQEIGADVFEDGAFVDVTGTSKGKGF 126

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRH F G  A+HG    HR  GS G    PGRVFK K MAGRMG  RVT  NL+V 
Sbjct: 127 AGTMKRHGFAGQGASHGTQAVHRKPGSIGGASTPGRVFKGKAMAGRMGNERVTTMNLKVH 186

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            VD + G++L+KG +PG +    ++VR + K     
Sbjct: 187 KVDAEAGVLLIKGAIPG-RNGGLVMVRSAVKGGARA 221


>gi|172039995|ref|YP_001799709.1| 50S ribosomal protein L3 [Corynebacterium urealyticum DSM 7109]
 gi|226725155|sp|B1VET6|RL3_CORU7 RecName: Full=50S ribosomal protein L3
 gi|171851299|emb|CAQ04275.1| 50S ribosomal protein L3 [Corynebacterium urealyticum DSM 7109]
          Length = 218

 Score =  253 bits (647), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 91/214 (42%), Positives = 121/214 (56%), Gaps = 2/214 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +KLGMT +++ E R +PVTV+    C V   RT D +GY AVQ+  GE   + V+
Sbjct: 7   KGILGKKLGMTQIFDDENRVVPVTVVEAGPCVVTQVRTKDIDGYEAVQIAFGEIDPRKVN 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P++ + E RV  D     VG   +   F     VDVTG + G GF+G
Sbjct: 67  KPESGHFKKAGVTPRRHVAEIRV-ADASGYEVGQDVTVEIFNEVDFVDVTGTSKGHGFAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G  A HG   +HR  G  G    PGRVFK K+MAGRMG NRVT++NL+V  V
Sbjct: 126 GMKRHGFAGQGAAHGNQAAHRRVGGIGGAATPGRVFKGKRMAGRMGNNRVTMQNLKVAKV 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           D    L+L+KG VPG      ++V+ + K     
Sbjct: 186 DTDSNLLLIKGAVPG-INGGIVVVKTAVKGGAKA 218


>gi|304438362|ref|ZP_07398303.1| 50S ribosomal protein L3 [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304368728|gb|EFM22412.1| 50S ribosomal protein L3 [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 220

 Score =  253 bits (647), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 97/219 (44%), Positives = 131/219 (59%), Gaps = 5/219 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +   ++ RKLGMT ++  EGR +PVTV+   N  V+  +T++ +GY AVQ+G G+ K KN
Sbjct: 4   LAKAILGRKLGMTQIFTEEGRVVPVTVVESGNNFVLRSKTVESDGYNAVQIGFGDIKEKN 63

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F    V   + + E R+    +   VG       F  G LVDV G + GKGF
Sbjct: 64  VTKPLKGQFEKAGVKAVRFIREMRLAAPSE-YNVGDTIGVDIFAEGDLVDVVGTSKGKGF 122

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KRHNF      HG S SHR  GSTG       GRV K KK+ GRMGG RVTV+ L 
Sbjct: 123 AGGIKRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLT 181

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           VV VD  R LIL+KG +PG KK  +++++D+ K A   K
Sbjct: 182 VVRVDADRNLILIKGAIPGPKKG-FVVIKDTVKPAKAAK 219


>gi|72163045|ref|YP_290702.1| 50S ribosomal protein L3 [Thermobifida fusca YX]
 gi|109893568|sp|Q47LJ3|RL3_THEFY RecName: Full=50S ribosomal protein L3
 gi|71916777|gb|AAZ56679.1| LSU ribosomal protein L3P [Thermobifida fusca YX]
          Length = 216

 Score =  253 bits (647), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 96/211 (45%), Positives = 125/211 (59%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            GV+  KLGMT V++  G+ +PVTVL      V   RT + +GY A+Q+G G    + V+
Sbjct: 7   KGVLGEKLGMTQVFDESGKVVPVTVLKAGPAVVTRVRTPETDGYSAIQLGYGHINPRKVN 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+  +    N++P++   E R   D     VG   +   F  G+ VDVTG T GKG++G
Sbjct: 67  KPLGDYLRKHNLTPRRHYVEVRTS-DASEYTVGQEITADVFQPGEKVDVTGKTKGKGYAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGGL A+HG    HRS GS G    PGRVFK  +MAGRMG  R TV+NL V SV
Sbjct: 126 VMKRHGFGGLGASHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNVRRTVQNLTVHSV 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+LVKG VPG      +LVR + K  
Sbjct: 186 DAEKGLLLVKGAVPGPN-GGLVLVRTAVKGG 215


>gi|325299132|ref|YP_004259049.1| 50S ribosomal protein L3 [Bacteroides salanitronis DSM 18170]
 gi|324318685|gb|ADY36576.1| 50S ribosomal protein L3 [Bacteroides salanitronis DSM 18170]
          Length = 205

 Score =  253 bits (647), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 80/204 (39%), Positives = 121/204 (59%), Gaps = 4/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   ++++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQLGFQDMKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PK+ L EF+     + L +G   +   F     VDV G + GKG+ G 
Sbjct: 63  PLMGHFKKAGVTPKRHLAEFK--DFSEELNLGDTITVELFNDAPYVDVIGTSKGKGYQGV 120

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  + THG     R  GS G    P +VFK  +MAG MG +RVT  NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMAGHMGCDRVTTHNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
             +  L+L+KG VPG  K S +++
Sbjct: 181 IPEHNLLLIKGSVPG-YKGSIVII 203


>gi|213693088|ref|YP_002323674.1| ribosomal protein L3 [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|254803655|sp|B7GNE0|RL3_BIFLI RecName: Full=50S ribosomal protein L3
 gi|213524549|gb|ACJ53296.1| ribosomal protein L3 [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|320459266|dbj|BAJ69887.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. infantis
           ATCC 15697]
          Length = 213

 Score =  253 bits (647), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 83/212 (39%), Positives = 118/212 (55%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R  ++ +KLGM+ V++  G  +PVT++ +    V   +T + +GY AVQ+G G      V
Sbjct: 4   RKALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKTEESDGYKAVQLGYGAIDPTKV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G F+   V+P++ L E R   D D    G   +   F  G  VDVTG T GKGF+
Sbjct: 64  TKPLAGHFAKAGVTPRRHLVEVRTD-DVDQFEAGQELAADLFEEGAEVDVTGTTKGKGFA 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F   R THG   + R  GS G    P R+ K K+MAGRMG    T +NL +VS
Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTATTQNLIIVS 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D + G++ +KG +PG  K   +LVR + K A
Sbjct: 183 ADVENGILAIKGAIPGP-KGGIVLVRSAVKGA 213


>gi|154505169|ref|ZP_02041907.1| hypothetical protein RUMGNA_02682 [Ruminococcus gnavus ATCC 29149]
 gi|153794648|gb|EDN77068.1| hypothetical protein RUMGNA_02682 [Ruminococcus gnavus ATCC 29149]
          Length = 242

 Score =  253 bits (646), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 94/229 (41%), Positives = 128/229 (55%), Gaps = 20/229 (8%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV- 58
           M+  ++A K+GMT ++N E G  IPVTVL    C V   +T++ +GY AVQVG  + K  
Sbjct: 16  MKKAILATKVGMTQIFNEETGVLIPVTVLQAGPCVVTQVKTVENDGYKAVQVGFVDKKEK 75

Query: 59  ---------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
                            V+K  +G F    VS K+ + EFR +  ++   +        F
Sbjct: 76  IVTKDKSGKKEIAHRNGVTKAEKGHFDKAGVSGKRYVKEFRFENAEE-YTLAQEIKADIF 134

Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
             G  VD T ++ GKGF GA+KRHN      THG S  HR  GS G   DP +VFK KKM
Sbjct: 135 AAGDKVDATAISKGKGFQGAIKRHNQSRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKM 193

Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            G+MGG ++TV+NLEVV VD +  L+LVKG VPG KK S I ++++ K+
Sbjct: 194 PGQMGGKKITVQNLEVVRVDAENNLLLVKGSVPGPKK-SLITIKETVKA 241


>gi|288801098|ref|ZP_06406554.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 299 str. F0039]
 gi|288332032|gb|EFC70514.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 299 str. F0039]
          Length = 204

 Score =  253 bits (646), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 85/205 (41%), Positives = 124/205 (60%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V++ +G+ IP TV+    C V   +T++K+GY AVQ+G GEAK  N +K
Sbjct: 3   GLIGRKIGMTSVFSADGKNIPCTVIEAGPCVVTQVKTIEKDGYKAVQLGFGEAKESNTNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           PM G F     +PKK L EF+  ++     +G   +   F     VDV G + GKGF G 
Sbjct: 63  PMMGTFKKAGTTPKKHLAEFKFDEE---YNLGDTITVELFNDANFVDVVGTSKGKGFQGV 119

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  ++THG     R  GS G    P +VFK  +MAG+MGG+RVT +NL+V+ V
Sbjct: 120 IKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLKVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  ++LVKG V G   ++ ++ +
Sbjct: 180 IPEHNILLVKGSVAGCNGSTLLIEK 204


>gi|328951236|ref|YP_004368571.1| 50S ribosomal protein L3 [Marinithermus hydrothermalis DSM 14884]
 gi|328451560|gb|AEB12461.1| 50S ribosomal protein L3 [Marinithermus hydrothermalis DSM 14884]
          Length = 206

 Score =  253 bits (646), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 98/211 (46%), Positives = 128/211 (60%), Gaps = 7/211 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  K+GMT ++  + R IPVTV+    C VV  RT++K+GY AVQ+G    K + V+
Sbjct: 2   KGILGAKIGMTQIW-KDDRAIPVTVILAGPCPVVQRRTVEKDGYEAVQLGFLPQKPQRVN 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KPM+G F    V P + L E R        P G V + S F  G+ VDVTG++ G+GF+G
Sbjct: 61  KPMKGHFEKAGVEPVRYLREIRGFN-----PEGDVVTVSIFQPGERVDVTGISKGRGFTG 115

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKR  F G   +HG    HR  GS G R+ PGRV+K KKMAGR G  RVTV+NLEVV V
Sbjct: 116 VMKRWGFAGGPDSHGAHRIHRHPGSIGQRKTPGRVYKGKKMAGRYGAERVTVQNLEVVDV 175

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             +  LILVKG VPG      +++R+S K A
Sbjct: 176 IAEENLILVKGAVPGPN-GGLVILRESVKGA 205


>gi|134096321|ref|YP_001101396.1| 50S ribosomal protein L3 [Herminiimonas arsenicoxydans]
 gi|212288400|sp|A4G9T8|RL3_HERAR RecName: Full=50S ribosomal protein L3
 gi|133740224|emb|CAL63275.1| 50S ribosomal subunit protein L3 [Herminiimonas arsenicoxydans]
          Length = 224

 Score =  253 bits (646), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 96/213 (45%), Positives = 125/213 (58%), Gaps = 2/213 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  IPVTVL + N +V   +T D +GY AVQV  G  +   V+K
Sbjct: 10  GLLGRKVGMMRIFTDDGDSIPVTVLDVSNNRVTQIKTPDVDGYSAVQVAFGSRRASRVNK 69

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQK-DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
              G  +   V     L EFRV       L VG V + S F VGQ VDV G+TIGKG++G
Sbjct: 70  ASAGHHAKAGVEAGTVLKEFRVAATAASELKVGDVIAASLFEVGQKVDVQGVTIGKGYAG 129

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRH+F   RATHG S SH   GS G  QDPGRVF  K+M G +G    T++NLE+  +
Sbjct: 130 TIKRHHFASGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVARTMQNLEIARI 189

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           D  R L+LVKG VPGA KN  ++V  + K    
Sbjct: 190 DADRQLLLVKGAVPGA-KNGQVIVSPAVKVKAK 221


>gi|291613236|ref|YP_003523393.1| 50S ribosomal protein L3 [Sideroxydans lithotrophicus ES-1]
 gi|291583348|gb|ADE11006.1| 50S ribosomal protein L3 [Sideroxydans lithotrophicus ES-1]
          Length = 214

 Score =  253 bits (646), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 92/215 (42%), Positives = 125/215 (58%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  +PVTVL + N +V   +T   +GY AVQV  G  +   
Sbjct: 1   MSLGLVGRKIGMTRIFTDDGTSLPVTVLDVSNNRVTQIKTAATDGYSAVQVAYGTRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V     L EF    +    L +G       F VGQ VDVTG+TIGKG
Sbjct: 61  VTKAAAGHFAKAGVEAGSVLKEFTATPEQLSSLTLGGKVGVDMFQVGQKVDVTGVTIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR++F   RATHG S SH   GS G  QDPGRVF  K+M G +G  + TV+NL++
Sbjct: 121 YAGTIKRYHFKSGRATHGNSKSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVQRTVQNLKI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           V +D  R L+LV G VPGA     ++VR + K+  
Sbjct: 181 VRIDADRQLLLVMGAVPGAPGGD-VIVRPAVKAGA 214


>gi|225020386|ref|ZP_03709578.1| hypothetical protein CORMATOL_00393 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305680123|ref|ZP_07402933.1| 50S ribosomal protein L3 [Corynebacterium matruchotii ATCC 14266]
 gi|224946775|gb|EEG27984.1| hypothetical protein CORMATOL_00393 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305660743|gb|EFM50240.1| 50S ribosomal protein L3 [Corynebacterium matruchotii ATCC 14266]
          Length = 218

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 83/214 (38%), Positives = 121/214 (56%), Gaps = 2/214 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +KLGMT +++     +PVTV+    C +   RT + +GY A+Q+  G+   + V 
Sbjct: 7   KGLLGKKLGMTQIFDENNHVVPVTVVEAGPCVITQIRTQETDGYTAIQIAYGDIDPRKVK 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V+P++ + E R+  D     +G   + + F     VDVTG+T GKGF+G
Sbjct: 67  KPQAGHFNKAGVTPRRHVAEIRMD-DVSGYELGQEITANIFDGITFVDVTGITKGKGFAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G  A HG   SHR  G  G    PGRVFK K+MAGRMG +RVT +NL++  +
Sbjct: 126 GMKRHGFAGQGAGHGNQASHRRVGGIGACATPGRVFKGKRMAGRMGQDRVTTQNLKIQKI 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           D    LIL+KG +PG  +   + V+ + K     
Sbjct: 186 DADANLILIKGAIPG-NRGGIVTVKTAVKGGNRA 218


>gi|56961932|ref|YP_173654.1| 50S ribosomal protein L3 [Bacillus clausii KSM-K16]
 gi|81822272|sp|Q5WLR2|RL3_BACSK RecName: Full=50S ribosomal protein L3
 gi|56908166|dbj|BAD62693.1| 50S ribosomal protein L3 [Bacillus clausii KSM-K16]
          Length = 206

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 92/212 (43%), Positives = 132/212 (62%), Gaps = 6/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+  +   V+  +T++ +GY A+Q+G  +AK   
Sbjct: 1   MTKGILGRKIGMTQVFAENGEVIPVTVIEAEPNIVLQKKTVESDGYEAIQIGFADAKKP- 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP  G  +    +PK+ + E R    D+ + VG   + + F  G LVDVTG + GKGF
Sbjct: 60  -NKPATGHAAKAETAPKRFIKEIRGVNLDE-VEVGQAINVTTFAAGDLVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRHN      +HG S  HR  GS G    P RVFK K + GRMGG ++T++NLE+V
Sbjct: 118 QGAIKRHNQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKALPGRMGGEQITMQNLEIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD++R L+LVKG VPGAKK S++ V+ + K+
Sbjct: 176 RVDEERNLLLVKGNVPGAKK-SYVTVQSAVKA 206


>gi|237742672|ref|ZP_04573153.1| LSU ribosomal protein L3P [Fusobacterium sp. 4_1_13]
 gi|256846067|ref|ZP_05551525.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_36A2]
 gi|294784802|ref|ZP_06750090.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_27]
 gi|229430320|gb|EEO40532.1| LSU ribosomal protein L3P [Fusobacterium sp. 4_1_13]
 gi|256719626|gb|EEU33181.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_36A2]
 gi|294486516|gb|EFG33878.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_27]
          Length = 211

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 90/212 (42%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT ++  +G+ +PVTV+      V+  +T +K+GY+A+Q+G  E K KN +
Sbjct: 2   SGILGKKIGMTQIF-EDGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   V P++ + E  V+  D    +G           + VD+TG + GKG SG
Sbjct: 61  KPLMGIFNKAGVKPQRFVKELAVESVDG-YELGQEIKVDVLAEVEYVDITGTSKGKGTSG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGG RA+HGVS +HR  GS G    PG+V K K+MAG+ G   VTV+NL+VV V
Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D +  L+L+KG VPGA KN ++++R + K  +
Sbjct: 180 DAEHNLLLIKGAVPGA-KNGYLVIRPAVKKVI 210


>gi|313673467|ref|YP_004051578.1| LSU ribosomal protein l3p [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312940223|gb|ADR19415.1| LSU ribosomal protein L3P [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 212

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 94/213 (44%), Positives = 129/213 (60%), Gaps = 4/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEA-KVK 59
           M   ++ RK+GMT ++  EG  IPVTV+    CQVV  +T +K+GY A+Q+G  +  K  
Sbjct: 1   MLKALIGRKIGMTQIFTSEGNVIPVTVVQAGPCQVVQKKTTEKDGYNALQLGFDKILKEN 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++KPM G F    V   K L EF+V+  D+   VG   + S F  G +VDV G++IGKG
Sbjct: 61  KINKPMGGHFKKHGVDAHKTLKEFKVENPDE-YQVGQEINVSVFAEGDIVDVQGVSIGKG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KRH F G  A HG S  HR+ GS G R+ PG   K KK+ GRMGG  VTV+ LEV
Sbjct: 120 FQGVIKRHGFAGGPAAHG-SDFHRAPGSIGMREWPGETLKGKKLPGRMGGKTVTVQKLEV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V V   + L+L+KG +PG   NS + ++++ K 
Sbjct: 179 VKVLPDKNLLLIKGAIPG-HDNSIVFIKETTKK 210


>gi|300870647|ref|YP_003785518.1| 50S ribosomal protein L3 [Brachyspira pilosicoli 95/1000]
 gi|42559690|sp|Q9FA04|RL3_BRAPL RecName: Full=50S ribosomal protein L3
 gi|11036693|gb|AAG27264.1| putative L3 ribosomal protein [Brachyspira pilosicoli]
 gi|300688346|gb|ADK31017.1| 50S ribosomal protein L3 [Brachyspira pilosicoli 95/1000]
          Length = 218

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 84/207 (40%), Positives = 118/207 (57%), Gaps = 3/207 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RKLGMT V++  G  I VTV+    C V+  R  +K+GY A+Q+G G  K K++ 
Sbjct: 2   VGIIGRKLGMTTVFDETGNAIAVTVVEAGPCTVMQVRDNEKDGYNAIQLGYGAVKEKHLK 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F   N+ PKK L EFR+  D     VG       F  G  +DV+ ++ G+GF+G
Sbjct: 62  KPQIGQFKKANLEPKKYLKEFRLD-DSSAYTVGQELKVDIFQAGDFIDVSSLSKGRGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHN+ G   +HG S   R  GS GC   P RV+K K M G MG    T++NL+VV +
Sbjct: 121 VMKRHNYDGGPMSHG-SNFRRRAGSIGCNSYPARVWKGKGMPGHMGNTLTTIQNLKVVEI 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDS 209
             +  LI++KG +PGA  N  + +  +
Sbjct: 180 RPEDNLIMIKGSIPGAI-NGIVKITQA 205


>gi|326334545|ref|ZP_08200756.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325693314|gb|EGD35242.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 205

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 84/205 (40%), Positives = 128/205 (62%), Gaps = 4/205 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP T++    C V   RT + +GY A+Q+G  + K K+ +
Sbjct: 2   SGLIGKKVGMTSIFDENGKNIPCTIIEAGPCVVTQVRTKEVDGYEALQLGFDDKKEKHTN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F+   +SPKKKL EF+  +      +G   +  +F  G+ VDVTG + GKGF G
Sbjct: 62  KAAAGHFAKAGISPKKKLIEFQGFE--STYKLGDTITAEFFVEGEFVDVTGTSKGKGFQG 119

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            ++RH FGG  ++THG     R+ GS G    P RVFK  +MAGRMG  +VTV+NL V+ 
Sbjct: 120 VVRRHGFGGVGQSTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLRVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           V  ++ L+++KGCVPG  KN+++ +
Sbjct: 180 VIPEKNLLILKGCVPG-HKNAYVTI 203


>gi|229815775|ref|ZP_04446100.1| hypothetical protein COLINT_02824 [Collinsella intestinalis DSM
           13280]
 gi|229808691|gb|EEP44468.1| hypothetical protein COLINT_02824 [Collinsella intestinalis DSM
           13280]
          Length = 206

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 90/209 (43%), Positives = 121/209 (57%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M + ++ RK+GMT V++ +   +PVTV+    C V   +T   +GY AVQ+G G+ K K+
Sbjct: 1   MINMILGRKIGMTQVWDEDDNVVPVTVIQAGPCTVSQVKTEATDGYNAVQIGFGDIKSKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM G F+   V P + L E RV+  ++   VG V + + F     VDV G + GKGF
Sbjct: 61  VNKPMAGHFAKAGVEPVRYLREVRVENGEEH-KVGDVVTVADFENVAKVDVIGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR N      THG  I  R  GS G    P RV K  KMAG MG  RVTVKNL VV
Sbjct: 120 QGRIKRWNQRRGPMTHGSHI-QRHPGSIGQCAYPARVLKGVKMAGHMGNARVTVKNLSVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            +D ++ L+LVKG VPG  KN  + +R +
Sbjct: 179 RIDAEQNLMLVKGAVPGG-KNGLVAIRMA 206


>gi|146329256|ref|YP_001210151.1| 50S ribosomal protein L3 [Dichelobacter nodosus VCS1703A]
 gi|166233139|sp|A5EX82|RL3_DICNV RecName: Full=50S ribosomal protein L3
 gi|146232726|gb|ABQ13704.1| 50S ribosomal protein L3 [Dichelobacter nodosus VCS1703A]
          Length = 212

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V +K+GMT +++ EG    VTV+ +    +   +T + +GY AVQV  G  K   
Sbjct: 1   MTMGLVGQKVGMTRIFDEEGTASAVTVIEIQPNIISQIKTDETDGYHAVQVSVGHRKSSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            +K + G F+  N+S    + EFRV  ++     VG     + F  GQ VDV   +IGKG
Sbjct: 61  TTKALAGHFAKANISAAALVKEFRVDSEEIAKYEVGKPVELAIFEQGQRVDVRARSIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KRHNF G R THG S+SHR  GS G  Q PGRVFK KKM+G MG    +V+N+E+
Sbjct: 121 YAGTIKRHNFRGQRKTHGNSVSHRVPGSIGQNQTPGRVFKGKKMSGHMGNKMCSVQNIEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
             +D +R L+L+KG VPGA K  ++++R S K+
Sbjct: 181 ARIDVERNLLLLKGSVPGA-KGGYVVIRPSVKA 212


>gi|331214855|ref|XP_003320108.1| 50S ribosomal protein L3 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309299098|gb|EFP75689.1| 50S ribosomal protein L3 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 367

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 95/212 (44%), Positives = 134/212 (63%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN- 60
           R+GV+ARK GMT  ++ +G RIPVTVL L++ QVV H+  +++ Y A+Q+G  +   +N 
Sbjct: 96  RTGVLARKRGMTSFWDSDGIRIPVTVLELEDVQVVGHKYKERDNYDAIQIGCTDKFSRNS 155

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +      ++  ++++PK+K+ EF V       P+G+  S ++F  GQ VDV   + GKGF
Sbjct: 156 IHNAQLKYYKHLDLTPKQKVTEFVVSNHQCFSPIGTSISAAHFVPGQFVDVKSNSKGKGF 215

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR  F G  A+HG +  HR  GSTG  QDPGRV+  KKMAGRMG   VTV+NL V 
Sbjct: 216 AGVMKRWGFSGGNASHGSTKHHRKAGSTGQHQDPGRVWPGKKMAGRMGNQPVTVRNLLVA 275

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +D    LI VKG VPG KK +++ V D+ K 
Sbjct: 276 RIDTDMNLIYVKGQVPGPKK-AFVRVTDAEKG 306


>gi|148655337|ref|YP_001275542.1| 50S ribosomal protein L3 [Roseiflexus sp. RS-1]
 gi|166234588|sp|A5USI9|RL3_ROSS1 RecName: Full=50S ribosomal protein L3
 gi|148567447|gb|ABQ89592.1| LSU ribosomal protein L3P [Roseiflexus sp. RS-1]
          Length = 210

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 96/213 (45%), Positives = 130/213 (61%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V++  G+ IPVT++ +  C V   RT +++GY AVQ+G  E K K+
Sbjct: 1   MIEGLLGRKIGMTQVFDATGQVIPVTIIEVGPCVVTQIRTKERDGYEAVQIGYQEVKAKS 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P +G          + L EFR     D   VG V +   FT GQ VDV G + G+GF
Sbjct: 61  LTRPEQGHLRGAG-KLLRHLREFRADNIADH-KVGDVLTVEMFTPGQRVDVIGTSKGRGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH FGG   THG S   R+ GS G   DPG V KN +MAGRMG  RVTV+NL VV
Sbjct: 119 QGVVKRHGFGGGPRTHGQSDRLRAPGSIGAGTDPGHVLKNTRMAGRMGNQRVTVQNLTVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  +R L+LV+G +PGA KN  ++VR + K +
Sbjct: 179 DVVPERNLLLVRGSIPGA-KNGLVMVRRAIKGS 210


>gi|160894756|ref|ZP_02075531.1| hypothetical protein CLOL250_02307 [Clostridium sp. L2-50]
 gi|156863690|gb|EDO57121.1| hypothetical protein CLOL250_02307 [Clostridium sp. L2-50]
          Length = 227

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 89/227 (39%), Positives = 123/227 (54%), Gaps = 19/227 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT +++  G  +PVTVL    C V   +T++ +GY A+QVG GE K + 
Sbjct: 1   MKKAILATKVGMTQIFDENGVLVPVTVLQAGPCVVTQVKTVENDGYDAIQVGFGEKKERI 60

Query: 61  VS----------------KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
            +                K   G     N +PK    EFR+  D     +G+      F 
Sbjct: 61  TTKDVSGKKVIRNPHGAGKAEVGHAKKANTTPKTFYREFRLD-DCAQYELGAEIKADVFA 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  +DVT  T GKG++G +KRH      + HG S  HR  GS G    PGRVFK KKM 
Sbjct: 120 EGDKIDVTAKTKGKGYAGGLKRHGLKSGPSGHG-SKYHRHAGSNGSATTPGRVFKGKKMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           G MG  RVT++NLEVV +D +  +ILVKG VPG KK S ++++D+ K
Sbjct: 179 GHMGSVRVTIQNLEVVKIDVENDVILVKGAVPGPKK-SLVMIKDTVK 224


>gi|269140570|ref|YP_003297271.1| 50S ribosomal protein L3 [Edwardsiella tarda EIB202]
 gi|267986231|gb|ACY86060.1| 50S ribosomal protein L3 [Edwardsiella tarda EIB202]
 gi|304560359|gb|ADM43023.1| LSU ribosomal protein L3p (L3e) [Edwardsiella tarda FL6-60]
          Length = 199

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 90/201 (44%), Positives = 126/201 (62%), Gaps = 2/201 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT ++  +G  IPVTV+ ++  +V   + LD +GY A+QV  G  K   V+KP  G F+ 
Sbjct: 1   MTRIFTEDGVSIPVTVIEIEANRVTQVKDLDNDGYRAIQVTTGSKKANRVTKPEAGHFAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             V   + L EFR+ + ++   +G   S   F   + VDVTG++ GKGF+G +KR NF  
Sbjct: 61  AGVEAGRVLREFRLSEGEEFT-IGQNISVEIFADVKKVDVTGISKGKGFAGTVKRWNFRT 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
             ATHG S+SHR+ GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD +R L+LV
Sbjct: 120 QDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVDAERNLLLV 179

Query: 192 KGCVPGAKKNSWILVRDSFKS 212
           KG VPGA     I V+ + K+
Sbjct: 180 KGAVPGATGGDLI-VKPAVKA 199


>gi|257440269|ref|ZP_05616024.1| 50S ribosomal protein L3 [Faecalibacterium prausnitzii A2-165]
 gi|257197303|gb|EEU95587.1| 50S ribosomal protein L3 [Faecalibacterium prausnitzii A2-165]
          Length = 210

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 126/212 (59%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT +++  G+ IPVTV+    C VV  +T++ +GY AVQ+G GE   K 
Sbjct: 1   MVKGIIGKKVGMTQLFDESGKVIPVTVIEAGPCTVVQKKTVESDGYQAVQLGFGEVSAKK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F   NV+PKK L EFR+ +D   + VG V     F  G  VDV G++ GKG+
Sbjct: 61  VNKAAAGHFKKANVAPKKTLREFRL-EDVSAMNVGDVLKADVFAAGDKVDVAGVSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR     LR +HG     R  GS G   +P RVF  K++ G MG  RVTV+NL VV
Sbjct: 120 QGVIKRFGQHRLRESHGTGPVARHAGSMGAISNPSRVFPGKRLPGHMGFVRVTVQNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  LI VKG VPG+ K + + + +S K+
Sbjct: 180 KVDTENNLIAVKGAVPGS-KGTIVTLANSVKA 210


>gi|67528204|ref|XP_661912.1| hypothetical protein AN4308.2 [Aspergillus nidulans FGSC A4]
 gi|40741279|gb|EAA60469.1| hypothetical protein AN4308.2 [Aspergillus nidulans FGSC A4]
 gi|259482889|tpe|CBF77796.1| TPA: 50S ribosomal protein L3 (AFU_orthologue; AFUA_4G06000)
           [Aspergillus nidulans FGSC A4]
          Length = 296

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 104/214 (48%), Positives = 140/214 (65%), Gaps = 3/214 (1%)

Query: 2   RSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           R+G +A K GMT +++   G+RI  TVL LD  QV+ H+T+D +GY AVQ+GAG     N
Sbjct: 72  RTGAIAIKKGMTAIFDPETGKRISCTVLQLDRVQVIAHKTVDVHGYYAVQMGAGWKHPNN 131

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K + G FS   VSPK+ ++EFRV+ +D LLPVG + +  +F  GQ VD    T GKGF
Sbjct: 132 VTKSLLGHFSEQGVSPKRHVYEFRVKDEDGLLPVGQLVNADWFHEGQYVDARSNTKGKGF 191

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179
           +G MKRH FGG   +HGVS++HRS GS G  Q  G RV+  KKMAG MG  + TV+NL+V
Sbjct: 192 AGVMKRHGFGGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLKV 251

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           + VD + GL+LV G V G  K   + ++D+ K  
Sbjct: 252 LKVDAENGLVLVNGSVSGP-KGCVVRIQDAIKKP 284


>gi|156312295|ref|XP_001617804.1| hypothetical protein NEMVEDRAFT_v1g225779 [Nematostella vectensis]
 gi|156195878|gb|EDO25704.1| predicted protein [Nematostella vectensis]
          Length = 205

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 83/206 (40%), Positives = 127/206 (61%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ RK+GMT +++  G+ IP TV+    C V   RT + +GY A+Q+G  + K K+ +
Sbjct: 2   SGLIGRKIGMTSLFDENGKNIPCTVIEAGPCVVTQVRTEEVDGYNALQLGFDDKKAKSSN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K + G F     + K+K+ EF+  +  +   +G   +  +F  G+ VDV+G++ GKGF G
Sbjct: 62  KALDGHFKKAGATAKRKVVEFQGFE--EEYKLGDSITVEHFEEGEFVDVSGISKGKGFQG 119

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG  +ATHG     R+ GS G    P RVFK  +MAGRMGG +V V+NL V+ 
Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGEKVKVQNLRVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V   + L++VKG +PG  KNS++ ++
Sbjct: 180 VVADKNLLVVKGAIPG-HKNSYVTIQ 204


>gi|240145878|ref|ZP_04744479.1| 50S ribosomal protein L3 [Roseburia intestinalis L1-82]
 gi|257202027|gb|EEV00312.1| 50S ribosomal protein L3 [Roseburia intestinalis L1-82]
 gi|291535430|emb|CBL08542.1| LSU ribosomal protein L3P [Roseburia intestinalis M50/1]
 gi|291537926|emb|CBL11037.1| LSU ribosomal protein L3P [Roseburia intestinalis XB6B4]
          Length = 227

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 86/229 (37%), Positives = 121/229 (52%), Gaps = 19/229 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58
           M+  ++A K+GMT ++N +G  +PVTVL    C V   +T++ +GY AVQV   + K   
Sbjct: 1   MKKAILATKVGMTQIFNADGVLVPVTVLEAGPCSVTQIKTVENDGYSAVQVAYADKKEKV 60

Query: 59  --------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
                           V+K   G F+   VS K+ + EF+ +  D+   +G V     F 
Sbjct: 61  VSKDANGKKEIRNRHGVNKAQMGHFAKAGVSGKRYVREFKFENADE-YKLGDVIKADIFA 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  +D T ++ GKGF GA+KR         HG S  HR  GS G    P RVFK K M 
Sbjct: 120 EGDKIDATAISKGKGFQGAIKRLGQHRGPMAHG-SKFHRHQGSNGACSSPSRVFKGKGMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           G MG  +VT +NLEVV VD +  L+LVKG VPGAKK   + ++++ K+ 
Sbjct: 179 GHMGSVKVTTQNLEVVRVDAENNLLLVKGAVPGAKK-CMVTIKETVKAG 226


>gi|157151310|ref|YP_001451235.1| 50S ribosomal protein L3 [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|262283583|ref|ZP_06061348.1| ribosomal protein L3 [Streptococcus sp. 2_1_36FAA]
 gi|189029485|sp|A8AZM5|RL3_STRGC RecName: Full=50S ribosomal protein L3
 gi|157076104|gb|ABV10787.1| ribosomal protein L3 [Streptococcus gordonii str. Challis substr.
           CH1]
 gi|262260640|gb|EEY79341.1| ribosomal protein L3 [Streptococcus sp. 2_1_36FAA]
          Length = 208

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFAAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLE+ 
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIA 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+ 
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAG 207


>gi|282857362|ref|ZP_06266599.1| 50S ribosomal protein L3 [Pyramidobacter piscolens W5455]
 gi|282584862|gb|EFB90193.1| 50S ribosomal protein L3 [Pyramidobacter piscolens W5455]
          Length = 208

 Score =  252 bits (644), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 96/206 (46%), Positives = 133/206 (64%), Gaps = 2/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT V+N  G+ +PVTV+    C VV  RT +KNGY A+ +G GE K + 
Sbjct: 1   MSLGILGQKLGMTRVFNEAGQSVPVTVIAAGPCPVVDVRTPEKNGYSAILLGLGERKPRK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G +    V P + L EFR++   +    G +   + F  G+ V VTG + GKGF
Sbjct: 61  VTKPLQGMYDRCGVRPCRWLREFRIENSAE-YKAGQIVDVAVFAEGETVSVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGL+A+HGVS+SHR   S+G    P  +FK K M G +G  RVT+KNL VV
Sbjct: 120 AGVMKRWNFGGLQASHGVSVSHRKPASSGASSYPSHIFKGKAMPGHLGNERVTIKNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
           +VD +  L+L+KG VPGA KN  +L+
Sbjct: 180 AVDKENNLLLIKGAVPGA-KNGLVLI 204


>gi|227487123|ref|ZP_03917439.1| 50S ribosomal protein L3 [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227541710|ref|ZP_03971759.1| 50S ribosomal protein L3 [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227092781|gb|EEI28093.1| 50S ribosomal protein L3 [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227182525|gb|EEI63497.1| 50S ribosomal protein L3 [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 216

 Score =  252 bits (644), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 84/212 (39%), Positives = 119/212 (56%), Gaps = 2/212 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++ + R +PVTV+    C V   RT++ +GY A+Q+  GE   +   
Sbjct: 7   KGILGTKLGMTQVFDEDNRVVPVTVVEAGPCVVTQIRTVETDGYNAIQIAYGEIDPRKAK 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G       +P++ + E R+  D     +G   +   F    LVDVTG T GKG++G
Sbjct: 67  KPQVGHAKKAGATPRRHVAEIRMD-DVSGYELGQDVTVDIFEGVNLVDVTGTTKGKGYAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRH F G  A HG   +HR  G  G    PGRVFK  +MAGRMG +RVT +NL+V  +
Sbjct: 126 AMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGQDRVTTQNLKVQRI 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D +  LIL+KG +PG  +   + V+ + K   
Sbjct: 186 DAEANLILIKGAIPG-NRGGLVTVKTAVKGGA 216


>gi|300782608|ref|YP_003762899.1| 50S ribosomal protein L3 [Amycolatopsis mediterranei U32]
 gi|299792122|gb|ADJ42497.1| large subunit ribosomal protein L3 [Amycolatopsis mediterranei U32]
          Length = 218

 Score =  252 bits (644), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 92/211 (43%), Positives = 120/211 (56%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++ + R +PVTV+      V   RT DK+GY AVQ+  G    + V+
Sbjct: 7   KGILGTKLGMTQVFDEQNRVVPVTVVKAGPNVVTQVRTQDKDGYTAVQLAFGAVDPRKVN 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P++ L E R   D +   VG   +   F  G  VDVTG + GKG++G
Sbjct: 67  KPRTGHFDKAGVTPRRFLAELRTT-DAETYEVGQEITAEVFAAGVEVDVTGTSKGKGYAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G  A+HG    HR  GS G    PGRVFK  +MAGRMG +RVT +NL V +V
Sbjct: 126 VMKRHGFKGQGASHGAQAVHRKPGSIGGCATPGRVFKGLRMAGRMGNDRVTTQNLTVHAV 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
               GL+L+KG VPG  K   + VR + K  
Sbjct: 186 RADDGLLLIKGAVPGP-KGGVLFVRSAAKGG 215


>gi|328851231|gb|EGG00388.1| hypothetical protein MELLADRAFT_73188 [Melampsora larici-populina
           98AG31]
          Length = 336

 Score =  252 bits (644), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 94/212 (44%), Positives = 132/212 (62%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK-VKN 60
           R+GV+ARK GMT  ++ +G R+PVTVL L++ QV+ H+   ++ Y AVQVG        N
Sbjct: 65  RTGVIARKRGMTSFWDADGVRVPVTVLELEDVQVIGHKYHARDSYCAVQVGCSNRNTRNN 124

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++   R +F    V+PK ++ EF+V  +  L+PVG+  S ++F  GQ VDV   + GKGF
Sbjct: 125 LNSSQRKWFEHAGVNPKHRVAEFQVTDETSLVPVGTEISSAHFVPGQFVDVKANSKGKGF 184

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR  F G  A+HG +  HR  GSTG  QDPGRV+  KKMAGRMG   +TV+NL V 
Sbjct: 185 AGVMKRWGFSGGNASHGSTKHHRKAGSTGQHQDPGRVWPGKKMAGRMGNQPITVRNLLVA 244

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +D    ++ VKG VPG  K  ++ + D+ K 
Sbjct: 245 RIDTALNVVYVKGQVPGPTKG-YVKISDAEKG 275


>gi|323490623|ref|ZP_08095828.1| 50S ribosomal protein L3 [Planococcus donghaensis MPA1U2]
 gi|323395715|gb|EGA88556.1| 50S ribosomal protein L3 [Planococcus donghaensis MPA1U2]
          Length = 209

 Score =  252 bits (644), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 87/212 (41%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY A+Q+G  + + K 
Sbjct: 1   MTKGILGRKIGMTQVFAENGDLIPVTVIEASPNVVLQKKTVEVDGYEAIQLGFEDKRDKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + E R     D   +G       F  G +VDVTG T GKGF
Sbjct: 61  SNKPSKGHVAKANTAPKRFIRELRNVNLAD-YEIGQEVKVDVFAEGDVVDVTGTTKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       THG S  HR  GS G    P RVFK KK+ G+MGG  +T++NL +V
Sbjct: 120 QGVIKRHGQSRGPMTHG-SRYHRRPGSMGPVA-PNRVFKQKKLPGQMGGTTITIQNLSIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPG++K + I V+ + K+
Sbjct: 178 KVDLERNLLLVKGNVPGSRK-ALIRVKSATKA 208


>gi|183601944|ref|ZP_02963313.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219682857|ref|YP_002469240.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|241190433|ref|YP_002967827.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241195839|ref|YP_002969394.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|183218829|gb|EDT89471.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219620507|gb|ACL28664.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|240248825|gb|ACS45765.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250393|gb|ACS47332.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|289178157|gb|ADC85403.1| LSU ribosomal protein L3P [Bifidobacterium animalis subsp. lactis
           BB-12]
 gi|295793420|gb|ADG32955.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis
           V9]
          Length = 216

 Score =  252 bits (644), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 85/212 (40%), Positives = 123/212 (58%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+ ++ +KLGM+ V++  G  +PVT++ +    V   +  + +GY AVQ+G G+   + V
Sbjct: 7   RNALLGKKLGMSQVWDENGFFVPVTLVEVSTNVVTAVKNEETDGYKAVQLGYGQVDPRKV 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KPM G F+   V+P++ L E R +  +D  P G   +   F  G  VDVTG T GKGF+
Sbjct: 67  TKPMAGHFAKAGVTPRRHLAEVRTENVEDFEP-GQELTAEVFPEGVQVDVTGTTKGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F   R THG   + R  GS G    P R+ K K+MAGRMG    TV+NL VVS
Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTNTVQNLTVVS 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D + G++ +KG +PG  K   +LVR + K A
Sbjct: 186 SDVENGILAIKGAIPGP-KGGIVLVRSAVKGA 216


>gi|258568440|ref|XP_002584964.1| 60S ribosomal protein L9 [Uncinocarpus reesii 1704]
 gi|237906410|gb|EEP80811.1| 60S ribosomal protein L9 [Uncinocarpus reesii 1704]
          Length = 301

 Score =  252 bits (644), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 98/216 (45%), Positives = 141/216 (65%), Gaps = 3/216 (1%)

Query: 2   RSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           R+G +A K GM+ +++   G+R P T+L LD  QV+ H+T +K+GY AVQVG G     N
Sbjct: 73  RTGAIAIKKGMSAIFDPETGKRTPCTILQLDRVQVISHKTREKHGYFAVQVGFGWKNPSN 132

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++PM G F++  VSPK+ + EFRV+ +  LLP+G + +  +F  GQ VDV   + G GF
Sbjct: 133 VTRPMLGHFAANEVSPKRYVHEFRVRDEVGLLPIGQMINADWFQEGQFVDVRSHSRGMGF 192

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179
           +G MKR  FGG   +HGVS++HRS GSTG  Q  G RV+  KKM G MG  +VT +NL+V
Sbjct: 193 TGVMKRWGFGGQDRSHGVSLTHRSLGSTGPSQGGGSRVYPGKKMPGNMGNEQVTTQNLKV 252

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           + VD ++GL++VKG V G K    + ++D+ K  + 
Sbjct: 253 LKVDPEKGLVVVKGSVSGPKGRC-VKIQDAIKKPLQ 287


>gi|256390140|ref|YP_003111704.1| 50S ribosomal protein L3 [Catenulispora acidiphila DSM 44928]
 gi|256356366|gb|ACU69863.1| ribosomal protein L3 [Catenulispora acidiphila DSM 44928]
          Length = 215

 Score =  252 bits (644), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 98/212 (46%), Positives = 125/212 (58%), Gaps = 2/212 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            GV+  KLGMT V++   R +PVTV+    C V   R  + +GY AVQ+  G  K   V+
Sbjct: 6   KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQIRKQEIDGYEAVQIAYGAVKPTKVT 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V+P++   E R   D     +G   +   FT GQ+VDV+G + G GF+G
Sbjct: 66  KPEAGHFAKAGVTPRRYTVEIRTT-DAAEYSLGQEITAETFTQGQIVDVSGTSKGHGFAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF GL A HGV   HRS GS G    PGRVFK  +MAGRMG  RVTV+NL V +V
Sbjct: 125 VMKRHNFKGLGAGHGVQRKHRSPGSIGACATPGRVFKGVRMAGRMGSARVTVQNLTVQAV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D ++GLILVKG +PG      +LV+ S K   
Sbjct: 185 DAEKGLILVKGAIPGPN-GGLVLVKTSVKKGA 215


>gi|126697640|ref|YP_001086537.1| 50S ribosomal protein L3 [Clostridium difficile 630]
 gi|254973731|ref|ZP_05270203.1| 50S ribosomal protein L3 [Clostridium difficile QCD-66c26]
 gi|255091120|ref|ZP_05320598.1| 50S ribosomal protein L3 [Clostridium difficile CIP 107932]
 gi|255099232|ref|ZP_05328209.1| 50S ribosomal protein L3 [Clostridium difficile QCD-63q42]
 gi|255305015|ref|ZP_05349187.1| 50S ribosomal protein L3 [Clostridium difficile ATCC 43255]
 gi|255312775|ref|ZP_05354358.1| 50S ribosomal protein L3 [Clostridium difficile QCD-76w55]
 gi|255515534|ref|ZP_05383210.1| 50S ribosomal protein L3 [Clostridium difficile QCD-97b34]
 gi|255648629|ref|ZP_05395531.1| 50S ribosomal protein L3 [Clostridium difficile QCD-37x79]
 gi|255654162|ref|ZP_05399571.1| 50S ribosomal protein L3 [Clostridium difficile QCD-23m63]
 gi|260681846|ref|YP_003213131.1| 50S ribosomal protein L3 [Clostridium difficile CD196]
 gi|260685444|ref|YP_003216577.1| 50S ribosomal protein L3 [Clostridium difficile R20291]
 gi|296449799|ref|ZP_06891568.1| 50S ribosomal protein L3 [Clostridium difficile NAP08]
 gi|296877863|ref|ZP_06901885.1| 50S ribosomal protein L3 [Clostridium difficile NAP07]
 gi|306518752|ref|ZP_07405099.1| 50S ribosomal protein L3 [Clostridium difficile QCD-32g58]
 gi|123174670|sp|Q18CG0|RL3_CLOD6 RecName: Full=50S ribosomal protein L3
 gi|115249077|emb|CAJ66888.1| 50S ribosomal protein L3 [Clostridium difficile]
 gi|260208009|emb|CBA60186.1| 50S ribosomal protein L3 [Clostridium difficile CD196]
 gi|260211460|emb|CBE01579.1| 50S ribosomal protein L3 [Clostridium difficile R20291]
 gi|296261397|gb|EFH08223.1| 50S ribosomal protein L3 [Clostridium difficile NAP08]
 gi|296431163|gb|EFH16988.1| 50S ribosomal protein L3 [Clostridium difficile NAP07]
          Length = 209

 Score =  252 bits (644), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 94/209 (44%), Positives = 128/209 (61%), Gaps = 4/209 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GMT ++  +G  IPVT +      V   +T+DK+GY A+Q+G  +AK K ++
Sbjct: 2   KGILGKKVGMTQIFTDKGVVIPVTAVEAGPMVVTQIKTVDKDGYNAIQIGFEDAKEKALN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP +G  ++ NV  KK L EFRV    +   VG       F  G  +DVTG++ GKGF G
Sbjct: 62  KPKKGHLAAANV-LKKHLKEFRVDS-VEGYTVGQEIKADVFEAGAKIDVTGISKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRH       THG S  HR  GS G    PGRVFKNKK+AG MG  +VTV+NLEVV V
Sbjct: 120 PIKRHGQSRGPETHG-SRYHRRPGSMGACSYPGRVFKNKKLAGHMGSVKVTVQNLEVVKV 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D  + LILVKG +PGA K S + ++++ K
Sbjct: 179 DADKNLILVKGAIPGA-KGSVVTIKEAIK 206


>gi|257095040|ref|YP_003168681.1| 50S ribosomal protein L3 [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257047564|gb|ACV36752.1| ribosomal protein L3 [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 214

 Score =  252 bits (644), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 101/215 (46%), Positives = 132/215 (61%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT ++  +G  +PVTVL + N +V   +T   +GY  VQV  G+ +   
Sbjct: 1   MSLGLVGRKVGMTRIFTDDGISVPVTVLDVSNNRVAQIKTPQNDGYSVVQVAFGKRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQ-KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           VSKP+ G  +   V     L EF V   +   L  G   S + F VGQ VDVTG TIGKG
Sbjct: 61  VSKPLAGHLAKAGVEAGHVLKEFPVSVAELATLKPGDQISVTIFAVGQKVDVTGKTIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRH+F    A HG S+SH++ GSTG  QDPGRVF  KKMAG +G  + T +NLEV
Sbjct: 121 FSGGIKRHHFSSQGAAHGNSVSHQALGSTGMAQDPGRVFPGKKMAGHLGAVKRTQQNLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           V VD  R L+L+KG VPG+ K S ++VR + K+  
Sbjct: 181 VRVDVDRQLLLLKGAVPGS-KGSDVIVRPAVKAGA 214


>gi|75906914|ref|YP_321210.1| 50S ribosomal protein L3 [Anabaena variabilis ATCC 29413]
 gi|109893410|sp|Q3MFC1|RL3_ANAVT RecName: Full=50S ribosomal protein L3
 gi|75700639|gb|ABA20315.1| LSU ribosomal protein L3P [Anabaena variabilis ATCC 29413]
          Length = 211

 Score =  252 bits (644), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 84/211 (39%), Positives = 125/211 (59%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT +++  G  IPVTV+ +  C V   ++   +GY A+QVG GE K K 
Sbjct: 1   MSVGILGTKLGMTQIFDEAGVAIPVTVVQVGPCVVTQVKSKQTDGYAAIQVGYGEVKPKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P+ G  +  +    + L E+      D   +G       F+ G+LVDV G +IG+GF
Sbjct: 61  LNRPLLGHLAKSSAPALRHLKEYHTDSSSD-YALGQEIKADIFSAGELVDVIGTSIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KR+NFG    +HG S +HR+ GS G    PGRV+  K+MAGR+GG RVT++ L V+
Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGTRVTIRKLTVI 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L+L+KG VPG    S + +  + K
Sbjct: 179 RVDAERNLLLIKGAVPGKP-GSLLSIVPAKK 208


>gi|239787563|emb|CAX84031.1| 50S ribosomal protein L3 [uncultured bacterium]
          Length = 213

 Score =  252 bits (644), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 98/212 (46%), Positives = 135/212 (63%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++ RKLGM+ ++  +G+ + VT++ +  C +V  +  + +GY AVQ+G  +AK   
Sbjct: 1   MRAGLIGRKLGMSRIFTADGKSVAVTLVKVGPCPIVGVKRGEPDGYEAVQLGYEDAKPSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V KP RG F+  NV P++ L EFRV       P G     + F VG  VDVTG ++GKGF
Sbjct: 61  VKKPERGVFAKANVPPQRILKEFRVDDASGYQP-GESLGLNLFEVGGRVDVTGRSVGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR  F G RA+HG  ++HRS GS G  Q PGRVFKNKKMAG MG   VT   L V 
Sbjct: 120 AGGMKRWGFRGGRASHGAHLTHRSPGSIGQCQTPGRVFKNKKMAGHMGDVNVTAMGLTVA 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+++KG VPG+ K S + +RD+ K+
Sbjct: 180 MVDLERNLLVLKGSVPGS-KGSVVFIRDAVKA 210


>gi|34764925|ref|ZP_00145270.1| LSU ribosomal protein L3P [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27885736|gb|EAA23133.1| LSU ribosomal protein L3P [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 211

 Score =  252 bits (644), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 135/212 (63%), Gaps = 3/212 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT ++  +G+ +PVTV+      V+  +T +K+GY+A+Q+G  E K KN +
Sbjct: 2   SGILGKKIGMTQIF-EDGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   V P++ + E  V+  D    +G        T  + VD+TG + GKG SG
Sbjct: 61  KPLMGIFNKAGVKPQRFVKELAVESVDG-YELGQEIKVDVLTEVEYVDITGTSKGKGTSG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGG RA+HGVS +HR  GS G    PG+V K K+MAG+ G   VTV+NL+VV V
Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D +  L+L+KG VPGA KN ++++R + K  +
Sbjct: 180 DAEHNLLLIKGAVPGA-KNGYLVIRPAVKKVI 210


>gi|319940060|ref|ZP_08014414.1| 50S ribosomal protein L3 [Streptococcus anginosus 1_2_62CV]
 gi|319810774|gb|EFW07101.1| 50S ribosomal protein L3 [Streptococcus anginosus 1_2_62CV]
          Length = 208

 Score =  252 bits (644), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGELIPVTVVEATPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFEAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLE+ 
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIA 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+ 
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAG 207


>gi|213425750|ref|ZP_03358500.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
          Length = 199

 Score =  252 bits (644), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 91/201 (45%), Positives = 125/201 (62%), Gaps = 2/201 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+KP  G F+ 
Sbjct: 1   MTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVTKPEAGHFAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             V   + L+EFR+ + ++   VG   S   F   + VDVTG + GKGF+G +KR NF  
Sbjct: 61  AGVEAGRGLWEFRLAEGEE-YTVGQSISVELFADVKKVDVTGTSKGKGFAGTVKRWNFRT 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
             ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV VD +R L+LV
Sbjct: 120 QDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAERNLLLV 179

Query: 192 KGCVPGAKKNSWILVRDSFKS 212
           KG VPGA     ++V+ + K+
Sbjct: 180 KGGVPGA-TGCDLIVKPAVKA 199


>gi|170780733|ref|YP_001709065.1| 50S ribosomal protein L3 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|212288255|sp|B0RB39|RL3_CLAMS RecName: Full=50S ribosomal protein L3
 gi|169155301|emb|CAQ00404.1| 50S ribosomal protein L3 [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 217

 Score =  252 bits (643), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 92/210 (43%), Positives = 124/210 (59%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           +G++  KLGMT V++   + IPVTV+ +    V   RT + +GY A+Q+  G+   +   
Sbjct: 9   TGLLGTKLGMTQVWDENNKLIPVTVVQITPNVVTQVRTPEVDGYGAIQIAYGQIDPRKAD 68

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P++ L E R   D     +G   +   F  G  VDV G + GKGF+G
Sbjct: 69  KPSTGHFDKAGVTPRRHLTEVR-TADFAEYTLGQEITVGAFEPGTKVDVVGTSKGKGFAG 127

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF G+ A+HG   +HR  GS G    P RVFK  +MAGRMGG RVTV NL V SV
Sbjct: 128 VMKRHNFKGVSASHGSHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGERVTVLNLVVHSV 187

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D ++GL+LVKG VPGA +   + VR++ K 
Sbjct: 188 DAEKGLLLVKGAVPGA-RGRIVFVRNAVKG 216


>gi|320529796|ref|ZP_08030873.1| 50S ribosomal protein L3 [Selenomonas artemidis F0399]
 gi|320137814|gb|EFW29719.1| 50S ribosomal protein L3 [Selenomonas artemidis F0399]
          Length = 220

 Score =  252 bits (643), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 97/219 (44%), Positives = 130/219 (59%), Gaps = 5/219 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +   ++ RKLGMT ++  EGR +PVTV+   N  V+ ++T + +GY AVQ+G G+ K KN
Sbjct: 4   LAKAILGRKLGMTQIFTEEGRVVPVTVVESGNNLVLRNKTNETDGYNAVQIGFGDVKEKN 63

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++G F    V   + + E R+        VG       F  G LVDV G + GKGF
Sbjct: 64  VTKPLKGQFEKAGVKAVRFIREMRLSAP-SKYNVGDTIGVDIFAEGDLVDVVGTSKGKGF 122

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KRHNF      HG S SHR  GSTG       GRV K KK+ GRMGG RVTV+ L 
Sbjct: 123 AGGIKRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLT 181

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           VV VD  R LIL+KG +PG KK  +++++D+ K A   K
Sbjct: 182 VVRVDTDRNLILIKGAIPGPKKG-FVVIKDTVKPAKAAK 219


>gi|295093643|emb|CBK82734.1| LSU ribosomal protein L3P [Coprococcus sp. ART55/1]
          Length = 227

 Score =  252 bits (643), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 87/229 (37%), Positives = 123/229 (53%), Gaps = 19/229 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT +++  G   PVTVL    C V   +T++ +GY A+QVG GE K + 
Sbjct: 1   MKKAILATKVGMTQIFDENGVLTPVTVLQAGPCVVTQIKTVENDGYDAIQVGFGEKKERV 60

Query: 61  VSK----------------PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
            +K                   G       +PK    EFR++   +   +G+      F 
Sbjct: 61  TTKDVSGKKVIRNPHGAGKAEVGHAKKAGTTPKAFYREFRLENTAE-YELGAEIKADVFA 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  +DVT  + GKG++G +KRH      + HG S  HR  GS G    PGRVFK KKM 
Sbjct: 120 AGDKIDVTAKSKGKGYAGGLKRHGLKSGPSGHG-SKYHRHAGSNGSATTPGRVFKGKKMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           G MG  RVT++NLEVV +D +  +ILVKG VPG KK S ++++D+ KS 
Sbjct: 179 GHMGSVRVTIQNLEVVKIDVENNVILVKGAVPGPKK-SLVMIKDTVKSG 226


>gi|77918315|ref|YP_356130.1| 50S ribosomal protein L3 [Pelobacter carbinolicus DSM 2380]
 gi|109893533|sp|Q3A6P7|RL3_PELCD RecName: Full=50S ribosomal protein L3
 gi|77544398|gb|ABA87960.1| LSU ribosomal protein L3P [Pelobacter carbinolicus DSM 2380]
          Length = 210

 Score =  252 bits (643), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 93/212 (43%), Positives = 128/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT V+ ++G+ IPVTV+    C V+  +T +K+GY A+Q+G G  K ++
Sbjct: 1   MTKGILGKKLGMTQVFAVDGKCIPVTVVEAGPCVVLQKKTEEKDGYNALQLGFGAKKTQS 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119
           V+KP  G F        + L E   +  DD   VG   +   +F  G ++DVTG + GKG
Sbjct: 61  VNKPAMGHFKKSGKGAFEFLREVECENIDDH-AVGDEITCDGFFATGDVIDVTGTSKGKG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR NF G RA+HG S+ HR  G  G    P RVFK KKMAG+MG  RVT + LEV
Sbjct: 120 FQGVIKRWNFAGGRASHG-SMFHRRPGGIGASAWPSRVFKGKKMAGQMGNKRVTTQGLEV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V V  ++ L+L+KG VPG   N  +L+R S K
Sbjct: 179 VDVRPEKSLVLIKGAVPGPV-NGLLLIRKSRK 209


>gi|34541541|ref|NP_906020.1| 50S ribosomal protein L3 [Porphyromonas gingivalis W83]
 gi|188995732|ref|YP_001929984.1| 50S ribosomal protein L3 [Porphyromonas gingivalis ATCC 33277]
 gi|42559592|sp|Q7MTL3|RL3_PORGI RecName: Full=50S ribosomal protein L3
 gi|226730547|sp|B2RLZ2|RL3_PORG3 RecName: Full=50S ribosomal protein L3
 gi|34397858|gb|AAQ66919.1| ribosomal protein L3 [Porphyromonas gingivalis W83]
 gi|188595412|dbj|BAG34387.1| 50S ribosomal protein L3 [Porphyromonas gingivalis ATCC 33277]
          Length = 205

 Score =  252 bits (643), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 90/204 (44%), Positives = 131/204 (64%), Gaps = 4/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EG+ +P TV+ +  C V   +TL+K+GY A+Q+G  +AK K+ +K
Sbjct: 3   GLLGKKIGMTSVFSAEGKNLPCTVIEVGPCVVTQVKTLEKDGYSALQLGFVDAKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F   NV+PK+ L EF+    +    +G V +  +F+    VDV G + GKGF G 
Sbjct: 63  PLAGHFKKANVAPKRHLAEFK--NFEGEHKLGDVLNVEFFSDADFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  +ATHG     R+ G+ G    P +VFK  +MAG+MG  RVTV+NLEV+ V
Sbjct: 121 VKRHGFGGVGQATHGQHNRLRAPGAVGACSYPAKVFKGTRMAGQMGNERVTVQNLEVIKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
             +  L+LVKG VPGA K S +L+
Sbjct: 181 MPEHNLLLVKGSVPGA-KGSILLI 203


>gi|224510783|pdb|3FIN|E Chain E, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas
           And Ef-Tu.Gdp.Kirromycin Ternary Complex, Fitted To A
           6.4 A Cryo-Em Map. This File Contains The 50s Subunit
          Length = 205

 Score =  252 bits (643), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 93/211 (44%), Positives = 125/211 (59%), Gaps = 7/211 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  K+GMT ++  + R +PVTV+    C VV  RT +K+GY AVQ+G      K V+
Sbjct: 2   KGILGVKVGMTRIFRDD-RAVPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLPQNPKRVN 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +P++G F+   V P + L E R     D  P G   +   F  G+ VDVTG + G+GF+G
Sbjct: 61  RPLKGHFAKAGVEPVRILREIR-----DFNPEGDTVTVEIFKPGERVDVTGTSKGRGFAG 115

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKR NF G   +HG    HR  GS G R+ PGRV+K KKMAG  G  RVTV NLEVV V
Sbjct: 116 VMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGHYGAERVTVMNLEVVDV 175

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             +  L+LVKG VPG      ++VR++ K+A
Sbjct: 176 IPEENLLLVKGAVPGPN-GGLVIVRETKKAA 205


>gi|300868356|ref|ZP_07112982.1| 50S ribosomal protein L3 [Oscillatoria sp. PCC 6506]
 gi|300333649|emb|CBN58170.1| 50S ribosomal protein L3 [Oscillatoria sp. PCC 6506]
          Length = 211

 Score =  252 bits (643), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 90/211 (42%), Positives = 125/211 (59%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT V++ +GR IPVTV+    C V   +T   +GY A+QVG G+ K K 
Sbjct: 1   MSVGILGTKLGMTQVFDEQGRAIPVTVIQAGPCTVTQIKTKQTDGYAAIQVGYGDVKAKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP  G  +    +P + L E+R+ +D     +G       FT GQ+VDV G +IGKGF
Sbjct: 61  LNKPELGHLAKSGATPVRHLQEYRL-EDIGEFQLGQQVKADLFTPGQIVDVIGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRHNF      HG S +HR  GS G    PGRV+  K+MAGR+G  ++TV+ L V+
Sbjct: 120 AGFQKRHNFKRGPMAHG-SKNHRQPGSIGPGTTPGRVYPGKRMAGRLGNVQITVRKLTVL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L+L+KG VPG K  + + V    K
Sbjct: 179 RVDTERNLLLIKGAVPG-KAGALVNVVPEKK 208


>gi|296119209|ref|ZP_06837779.1| 50S ribosomal protein L3 [Corynebacterium ammoniagenes DSM 20306]
 gi|295967835|gb|EFG81090.1| 50S ribosomal protein L3 [Corynebacterium ammoniagenes DSM 20306]
          Length = 217

 Score =  252 bits (643), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 84/214 (39%), Positives = 123/214 (57%), Gaps = 2/214 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +KLGMT V++ E R +PVTV+    C V   RT++ +GY A+Q+  GE   +  +
Sbjct: 6   KGILGKKLGMTQVFDEENRVVPVTVVEAGPCVVTQIRTVENDGYNAIQIAYGEIDPRKAN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P++ + E R+  D     VG   +   F     VDVTG + G G++G
Sbjct: 66  KPASGHFKKAGVTPRRHVAEIRMD-DVTAYEVGQDVTVEVFEGITFVDVTGTSKGHGYAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRH F G  A HG   +HR  G  G    PGRVFK K+MAGRMG +RVT +NL++  +
Sbjct: 125 AMKRHGFAGQGAAHGNQAAHRRVGGIGGAATPGRVFKGKRMAGRMGSDRVTTQNLKIQKI 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           D +  L+L+KG +PG  +   + V+ + K   + 
Sbjct: 185 DAESNLLLIKGAIPGV-RGGLVTVKTAVKGGAHA 217


>gi|258542027|ref|YP_003187460.1| 50S ribosomal protein L3 [Acetobacter pasteurianus IFO 3283-01]
 gi|256633105|dbj|BAH99080.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-01]
 gi|256636162|dbj|BAI02131.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-03]
 gi|256639217|dbj|BAI05179.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-07]
 gi|256642271|dbj|BAI08226.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-22]
 gi|256645326|dbj|BAI11274.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-26]
 gi|256648381|dbj|BAI14322.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-32]
 gi|256651434|dbj|BAI17368.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654425|dbj|BAI20352.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-12]
          Length = 227

 Score =  252 bits (643), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 128/219 (58%), Positives = 165/219 (75%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+KLGM+ ++  +G  +PVTVLH+D+ QVV  R  +++GY+AVQ+G G+AKVKN
Sbjct: 1   MRTGLIAKKLGMSRLFKEDGTHVPVTVLHVDDVQVVDVRNQERDGYVAVQLGMGKAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP RG F+   V PK+ L EFRV  DD  L VG+  S S+F VGQ VDVTG++ GKGF
Sbjct: 61  VTKPNRGHFARTKVEPKQALREFRV-ADDAALEVGATLSASHFVVGQKVDVTGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GAMKR NF GL ATHGVSISHRSHGSTG RQDPG+ FKNKKMAG +G  RVT  NLE+ 
Sbjct: 120 AGAMKRWNFAGLEATHGVSISHRSHGSTGNRQDPGKTFKNKKMAGHLGDERVTTLNLEIA 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           +VD ++ LI+V+G VPGA KN  +L+RD+ K A +    
Sbjct: 180 AVDPEKNLIMVRGSVPGA-KNGVVLIRDAIKKARHGDAP 217


>gi|148273801|ref|YP_001223362.1| 50S ribosomal protein L3 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|212288254|sp|A5CUB3|RL3_CLAM3 RecName: Full=50S ribosomal protein L3
 gi|147831731|emb|CAN02700.1| 50S ribosomal protein L3 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 217

 Score =  252 bits (643), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 92/210 (43%), Positives = 124/210 (59%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           +G++  KLGMT V++   + IPVTV+ +    V   RT + +GY A+Q+  G+   +   
Sbjct: 9   TGLLGTKLGMTQVWDENNKLIPVTVVQITPNVVTQVRTPEVDGYGAIQIAYGQIDPRKAD 68

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P++ L E R   D     +G   +   F  G  VDV G + GKGF+G
Sbjct: 69  KPSTGHFDKAGVTPRRHLTEVR-TADFAEYALGQEITVGAFEPGTKVDVVGTSKGKGFAG 127

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHNF G+ A+HG   +HR  GS G    P RVFK  +MAGRMGG RVTV NL V SV
Sbjct: 128 VMKRHNFKGVSASHGSHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGERVTVLNLVVHSV 187

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D ++GL+LVKG VPGA +   + VR++ K 
Sbjct: 188 DAEKGLLLVKGAVPGA-RGRIVFVRNAVKG 216


>gi|257454047|ref|ZP_05619321.1| 50S ribosomal protein L3 [Enhydrobacter aerosaccus SK60]
 gi|257448525|gb|EEV23494.1| 50S ribosomal protein L3 [Enhydrobacter aerosaccus SK60]
          Length = 212

 Score =  252 bits (643), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 94/213 (44%), Positives = 133/213 (62%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V +K GMT ++   G  IPVTV+ +   ++   +T D +GY A+QV  GE +   
Sbjct: 1   MAIGLVGKKCGMTRIFTEAGVSIPVTVVEVTANRISQIKTQDTDGYQAIQVTTGERRDSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  +  +EFRV+  + +    GS  +   F VGQ+VDV G + GKG
Sbjct: 61  VNAAQKGHFAKAGVAAGRGTWEFRVEDSELEGREAGSEIAADLFQVGQIVDVIGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KRHNF     THG S+SHR  GSTG  Q PGRVFK KKM G+MG  RVTV+ LEV
Sbjct: 121 FQGGIKRHNFRSQDWTHGNSVSHRVVGSTGQNQTPGRVFKGKKMPGQMGNKRVTVQGLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +SVD ++G++++KG +PGA     ++VR S K+
Sbjct: 181 ISVDAEKGILVIKGAIPGANGGD-VIVRPSVKA 212


>gi|94985967|ref|YP_605331.1| 50S ribosomal protein L3 [Deinococcus geothermalis DSM 11300]
 gi|122986549|sp|Q1IX72|RL3_DEIGD RecName: Full=50S ribosomal protein L3
 gi|94556248|gb|ABF46162.1| ribosomal protein L3 [Deinococcus geothermalis DSM 11300]
          Length = 207

 Score =  252 bits (643), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 91/213 (42%), Positives = 120/213 (56%), Gaps = 7/213 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT ++  + R +PVTV+    C VV  +T   +GY AVQ+G      K 
Sbjct: 1   MTKGILGTKIGMTQIWKGD-RAVPVTVVLAGPCPVVQRKTKLTDGYEAVQLGFAPKSEKR 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++P  G F    V+P + L EFR     D  P G   +   F  G+ +D TG + GKG 
Sbjct: 60  VNRPELGHFKKAGVAPMRFLREFR-----DFAPEGDTVNVDIFAEGEKIDATGTSKGKGT 114

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G MKR NF G  A+HG    HR  GS G R+ PGRV+K K+MAG MG  RVTV+NLEVV
Sbjct: 115 QGVMKRWNFAGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGHMGMERVTVQNLEVV 174

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V     LILVKG +PGA     +++R + K  
Sbjct: 175 EVRADENLILVKGAIPGAN-GGLVMLRQAAKGG 206


>gi|227876215|ref|ZP_03994331.1| ribosomal protein L3 [Mobiluncus mulieris ATCC 35243]
 gi|307701180|ref|ZP_07638202.1| 50S ribosomal protein L3 [Mobiluncus mulieris FB024-16]
 gi|227843176|gb|EEJ53369.1| ribosomal protein L3 [Mobiluncus mulieris ATCC 35243]
 gi|307613574|gb|EFN92821.1| 50S ribosomal protein L3 [Mobiluncus mulieris FB024-16]
          Length = 218

 Score =  252 bits (643), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 88/210 (41%), Positives = 129/210 (61%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
             ++ RKLGMT V++ EG+ +PVTV+ ++   V   RT +++GY A+Q+G G+   + V+
Sbjct: 10  KALLGRKLGMTQVWDEEGKLVPVTVVEVEKNVVTDIRTPERDGYTALQLGFGQLDERKVT 69

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KPM G F+   V+P++ L E R   D     +G       F  G LVDVTG T GKGF+G
Sbjct: 70  KPMAGHFAKSGVTPRRHLAEVRTT-DAGSYELGQELGADLFETGALVDVTGNTKGKGFAG 128

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ ++HG   +HR  GS G    PGRVF+   MAGRMGG R T+ NL+V ++
Sbjct: 129 VMKRHGFQGVSSSHGAHRNHRKPGSIGACATPGRVFRGLNMAGRMGGERRTIMNLKVQAI 188

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D  +GL+++ G +PG  K   +++R + K 
Sbjct: 189 DADKGLVVIAGAIPGP-KGGIVMIRSAVKG 217


>gi|254579248|ref|XP_002495610.1| ZYRO0B15444p [Zygosaccharomyces rouxii]
 gi|238938500|emb|CAR26677.1| ZYRO0B15444p [Zygosaccharomyces rouxii]
          Length = 273

 Score =  252 bits (643), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 99/218 (45%), Positives = 148/218 (67%), Gaps = 2/218 (0%)

Query: 1   MRSGVVARKLGMTCVYNI-EGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R G + +K GM   ++   G+R+  TVL +DN +V++HRT+++NGY A QVG G    +
Sbjct: 56  LRCGALTKKEGMMPFFDEATGKRVACTVLKMDNVEVLMHRTMEENGYFACQVGYGSKHPQ 115

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            VS+ M G F+S  V+PK+++ EFRV+ +D LLP+G++  PS+F  GQ VD+  +  GKG
Sbjct: 116 KVSRQMLGHFASKLVNPKERVSEFRVKNEDGLLPLGTLIKPSFFNNGQYVDLKSICKGKG 175

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MK+++F GLRA+HG SI HR  GS G  QDPGRV   KKM G MG + VT++N +V
Sbjct: 176 FAGVMKKYHFAGLRASHGTSIMHRHGGSYGQNQDPGRVLPGKKMPGHMGNHHVTIQNAQV 235

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           + VDD+ G+IL+KG V G    +++ ++D+ K A   +
Sbjct: 236 LKVDDELGVILIKGSVAGP-TGAFVKIQDAIKKAPASE 272


>gi|58267640|ref|XP_570976.1| ribosomal large subunit assembly and maintenance-related protein
           [Cryptococcus neoformans var. neoformans JEC21]
 gi|134112043|ref|XP_775557.1| hypothetical protein CNBE2710 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50258216|gb|EAL20910.1| hypothetical protein CNBE2710 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57227210|gb|AAW43669.1| ribosomal large subunit assembly and maintenance-related protein,
           putative [Cryptococcus neoformans var. neoformans JEC21]
          Length = 308

 Score =  251 bits (642), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 103/222 (46%), Positives = 140/222 (63%), Gaps = 4/222 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVK 59
           +R+G++ARK GMT +++ +GRR PVTVL +D  QVV H      + Y  +Q+GA   + K
Sbjct: 43  LRTGLIARKRGMTALWDADGRRWPVTVLQVDANQVVRHSPPPPTSPYHTLQIGASPRREK 102

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             +K   G F    V PK +L EF+V +D  ++PVG+  S  +F  GQ VDV G+TIGKG
Sbjct: 103 TTTKQQLGHFKKAGVEPKYRLKEFQVSED-AVVPVGTELSAGHFVPGQFVDVQGVTIGKG 161

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKRH F GL+A+HG S+ HRS GS G  QDPGRV   KKM G MG    T +NL +
Sbjct: 162 FQGVMKRHGFRGLKASHGTSVKHRSPGSIGQNQDPGRVIPGKKMPGHMGNVTRTTQNLLI 221

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
             VD    L+ V+GCVPG+  +S++ V+DS K  V  K +++
Sbjct: 222 HRVDHVLNLLYVRGCVPGSD-DSFLYVKDS-KKLVKSKAQLA 261


>gi|255083651|ref|XP_002508400.1| predicted protein [Micromonas sp. RCC299]
 gi|226523677|gb|ACO69658.1| predicted protein [Micromonas sp. RCC299]
          Length = 259

 Score =  251 bits (642), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 102/215 (47%), Positives = 137/215 (63%), Gaps = 2/215 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           RSG +A K GMT  +N  G R+P+TVL +D+C+V   +T +K GY A+Q+GAG  K K +
Sbjct: 14  RSGAIAVKCGMTAEWNEHGVRVPLTVLWIDDCRVTQVKTQEKEGYTALQLGAGSKKAKRL 73

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           ++  RG F + +V    +L EFRV  D  +LPVG+    S+F+ GQ VD+ G TIGKGF 
Sbjct: 74  NRSERGHFIAGDVPFSAELTEFRVSPD-AILPVGTAIGASHFSAGQYVDIQGRTIGKGFQ 132

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR  F GL A+HG +  HR+HGS G  QDPGRV+K KKMAGRMG    TV+++ V  
Sbjct: 133 GPMKRWGFSGLPASHGTTKKHRAHGSIGNSQDPGRVWKGKKMAGRMGNRTRTVQSVFVYK 192

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           VD  R L+ VKG VPG K   ++ + D+ +     
Sbjct: 193 VDADRNLLYVKGQVPG-KAGRFLKITDALRKPPET 226


>gi|295101414|emb|CBK98959.1| LSU ribosomal protein L3P [Faecalibacterium prausnitzii L2-6]
          Length = 210

 Score =  251 bits (642), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 126/212 (59%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT +++  G+ IPVTV+    C VV  +T++ +GY AVQ+G GE   K 
Sbjct: 1   MVKGIIGKKVGMTQLFDESGKVIPVTVIEAGPCTVVQKKTVESDGYQAVQLGFGEVSAKK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F   NV+PKK L EFR+ +D   + VG V     F  G  VDV G++ GKG+
Sbjct: 61  VNKAAAGHFKKANVAPKKTLREFRL-EDVSAMNVGDVLKADVFAAGDKVDVVGVSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR+    LR +HG     R  GS G    P RVF  K++ G MG  RVTV+NL VV
Sbjct: 120 QGVIKRYGQHRLRESHGTGPVARHAGSNGSTSTPSRVFPGKRLPGHMGFVRVTVQNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  LI VKG VPG+ K + + + +S K+
Sbjct: 180 KVDTENNLIAVKGAVPGS-KGTIVTLANSVKA 210


>gi|294341610|emb|CAZ90027.1| 50S ribosomal protein L3 [Thiomonas sp. 3As]
          Length = 215

 Score =  251 bits (642), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 98/212 (46%), Positives = 133/212 (62%), Gaps = 2/212 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V RK+GMT V+  +G  I VTVL     +V   RT D +GY AVQV  G  K   ++
Sbjct: 1   MGLVTRKVGMTRVFTDDGASIAVTVLDASGNRVSQVRTQDVDGYSAVQVAYGSRKPSRLT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           K   G  +   V P + L EF +  +       G+    S F VGQ+VD  G++IGKGF+
Sbjct: 61  KGQAGHLAKAGVEPAEILKEFDLPAEKAADYAPGATVPASLFQVGQMVDAQGVSIGKGFA 120

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G++KRHNF   RA+HG S++ R+ GS G  QDPGRVF  K+MAG+MG   VTV+NLEVV 
Sbjct: 121 GSIKRHNFSSNRASHGNSVTTRAPGSIGMAQDPGRVFPGKRMAGQMGNETVTVQNLEVVR 180

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           +D+ R LILVKG VPG+ ++ ++ +R + KSA
Sbjct: 181 IDEARQLILVKGAVPGS-RSGFVFLRPAVKSA 211


>gi|288574662|ref|ZP_06393019.1| ribosomal protein L3 [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570403|gb|EFC91960.1| ribosomal protein L3 [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 208

 Score =  251 bits (642), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 95/206 (46%), Positives = 133/206 (64%), Gaps = 2/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT +YN  G+ +PVTV+    C V+  RT +KNGY A+ +G G+ K + 
Sbjct: 1   MSLGILGQKLGMTQIYNENGQAVPVTVVEAGPCPVLAVRTEEKNGYDAILLGFGKVKPRK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP++GFF       K+ L EFR+    D   VG+    + F  G+ VD TG++ GKGF
Sbjct: 61  VTKPLKGFFDKAQSEAKRWLKEFRISNASD-YEVGNAVDVTIFEAGEKVDATGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR+NFGG  A+HGVS +HR   S+G    P  VFK K M G++G  +VTVKNL VV
Sbjct: 120 AGVIKRYNFGGAPASHGVSKTHRKPNSSGASSYPSHVFKGKTMPGQLGNEQVTVKNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
           +VD +  L+LVKG +PGA KN  +L+
Sbjct: 180 AVDVENNLVLVKGAIPGA-KNGLVLL 204


>gi|325269535|ref|ZP_08136151.1| 50S ribosomal protein L3 [Prevotella multiformis DSM 16608]
 gi|324988154|gb|EGC20121.1| 50S ribosomal protein L3 [Prevotella multiformis DSM 16608]
          Length = 204

 Score =  251 bits (642), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 84/205 (40%), Positives = 125/205 (60%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G GEAK K  SK
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKTVEKDGYKAVQLGFGEAKEKRTSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G F     +PKK L EF+  ++     +G   +   F   + VD+ G + GKGF G 
Sbjct: 63  PQQGHFKKAGTTPKKHLAEFKFDEE---YNLGDTITVELFNDAKFVDIVGTSKGKGFQGV 119

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  ++THG     R  GS G    P +VFK  +MAG+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLQVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  L+LVKG V G   ++ I+ +
Sbjct: 180 IPEHNLLLVKGSVAGCNGSTVIIKK 204


>gi|308070975|ref|YP_003872580.1| 50S ribosomal protein L3 [Paenibacillus polymyxa E681]
 gi|310644202|ref|YP_003948961.1| 50S ribosomal protein l3 [Paenibacillus polymyxa SC2]
 gi|305860254|gb|ADM72042.1| 50S ribosomal protein L3 [Paenibacillus polymyxa E681]
 gi|309249153|gb|ADO58720.1| 50S ribosomal protein L3 [Paenibacillus polymyxa SC2]
          Length = 207

 Score =  251 bits (642), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 83/210 (39%), Positives = 117/210 (55%), Gaps = 4/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +KLGMT V+  EG  + VTV+    C V+  + L+ +GY A+Q+G  + K K  +
Sbjct: 2   KGILGKKLGMTQVFTPEGNVLAVTVIEAGPCVVLQKKDLENDGYEAIQLGFSDKKEKRSN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G     N +PK+ + E R   D     VG       FT G+ VDVTG++ GKGF+G
Sbjct: 62  KPEAGHAKKANTAPKRYVRELRG-IDLAAYEVGQELKADVFTEGEFVDVTGISKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR         HG S  HR  GS G  Q   RV K K + G MG   VT++ LEVV +
Sbjct: 121 VIKRWGQSRGPMAHG-SRYHRGPGSMGSIQ-ANRVPKGKHLPGHMGHETVTIQRLEVVKI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R ++LVKG +PG  KNS++ V ++ K 
Sbjct: 179 DTERNVLLVKGSIPGP-KNSFVKVLETVKK 207


>gi|157826063|ref|YP_001493783.1| 50S ribosomal protein L3 [Rickettsia akari str. Hartford]
 gi|166234584|sp|A8GPF0|RL3_RICAH RecName: Full=50S ribosomal protein L3
 gi|157800021|gb|ABV75275.1| 50S ribosomal protein L3 [Rickettsia akari str. Hartford]
          Length = 215

 Score =  251 bits (642), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 111/212 (52%), Positives = 163/212 (76%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+K+GMT V+N +G RIP+T++ +D+CQVV H+TL+K+GY A+ +G  + K+  
Sbjct: 1   MRTGIIAQKIGMTSVFNDKGERIPLTLVKVDDCQVVGHKTLEKHGYNALVIGIKDKKISR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+  F++  +SPK KL EFR+ +  + + + +     +F  GQ VD+T  TIGKGF
Sbjct: 61  VTKPMKQVFANAKISPKTKLKEFRISEG-NFIDIAANLEVDHFMAGQFVDITATTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ 
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +VD +R LI+++G +PG  KNS++ ++D+ K 
Sbjct: 180 AVDRERKLIMIRGSIPG-HKNSYLSIKDAVKK 210


>gi|315222820|ref|ZP_07864706.1| 50S ribosomal protein L3 [Streptococcus anginosus F0211]
 gi|315188123|gb|EFU21852.1| 50S ribosomal protein L3 [Streptococcus anginosus F0211]
          Length = 208

 Score =  251 bits (642), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 6/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTEAGELIPVTVVEAAPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K+ + L VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFAAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G    P RVFKNK +AGRMGGNRVT++NLE+ 
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIA 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ +IL+KG VPGAKK S I ++ + K+ 
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAG 207


>gi|225175674|ref|ZP_03729668.1| ribosomal protein L3 [Dethiobacter alkaliphilus AHT 1]
 gi|225169003|gb|EEG77803.1| ribosomal protein L3 [Dethiobacter alkaliphilus AHT 1]
          Length = 213

 Score =  251 bits (642), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 92/217 (42%), Positives = 128/217 (58%), Gaps = 4/217 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT V+  EG+ IPVTV+    C VV  +T + +GY AVQ G G  K K+
Sbjct: 1   MQKAILGKKVGMTQVFTEEGKVIPVTVIEAGPCVVVQKKTKEVDGYDAVQFGYGAIKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP+ G F      PKK + E R+ +D     VG       F  G  VD++G+T GKGF
Sbjct: 61  VTKPLAGHFKKAEQEPKKYIREMRL-EDTASYEVGQEVKADVFAEGDWVDISGVTRGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GA+KRH FG    THG    HR  GS G   D  RVFK +K+ GRMGG +VTV+ L+VV
Sbjct: 120 AGAIKRHGFGRGPTTHGSH-YHRGPGSLGAV-DAARVFKGRKLPGRMGGVKVTVQKLKVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
            VD  R L+L+ G VPG  +   + ++++ K+    K
Sbjct: 178 KVDTDRNLLLIHGAVPGP-RGGLVTLKNTVKNVKEAK 213


>gi|228474733|ref|ZP_04059464.1| 50S ribosomal protein L3 [Staphylococcus hominis SK119]
 gi|314935832|ref|ZP_07843184.1| 50S ribosomal protein L3 [Staphylococcus hominis subsp. hominis
           C80]
 gi|228271396|gb|EEK12764.1| 50S ribosomal protein L3 [Staphylococcus hominis SK119]
 gi|313656397|gb|EFS20137.1| 50S ribosomal protein L3 [Staphylococcus hominis subsp. hominis
           C80]
          Length = 220

 Score =  251 bits (642), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 91/221 (41%), Positives = 122/221 (55%), Gaps = 11/221 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+  +   V+  +T + +GY A+QVG  + +   
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEANQNVVLQKKTEEVDGYNAIQVGFADKQAYK 60

Query: 61  V--------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
                    +KP  G       +PK+ + EFR    D+   VG   +   F  G ++DVT
Sbjct: 61  KDAKSNKYANKPAEGHAKKAGAAPKRFIREFRNVNVDE-YEVGQEVTVDTFEAGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G + GKGF GA+KRH  G     HG    HR+ GS G   D  RVFK +KM GRMGGN V
Sbjct: 120 GTSKGKGFQGAIKRHGQGRGPMAHGSH-FHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           TV+NLEVV VD    +ILVKG VPG KK  ++ ++ S K  
Sbjct: 179 TVQNLEVVQVDTDNNVILVKGNVPGPKKG-FVEIKSSIKKG 218


>gi|118579119|ref|YP_900369.1| 50S ribosomal protein L3 [Pelobacter propionicus DSM 2379]
 gi|166233173|sp|A1ALU1|RL3_PELPD RecName: Full=50S ribosomal protein L3
 gi|118501829|gb|ABK98311.1| LSU ribosomal protein L3P [Pelobacter propionicus DSM 2379]
          Length = 209

 Score =  251 bits (642), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 85/201 (42%), Positives = 121/201 (60%), Gaps = 3/201 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT ++  +G R+PVTV+    C V   +T   +GY AVQVG       N SKPM G  + 
Sbjct: 12  MTQIFTEDGTRVPVTVIQAGPCVVTQKKTASIDGYSAVQVGFDSTPAANASKPMLGHCTK 71

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
                 + L EF+     ++  +G V +   FT G  VDVTG +IGKGF G +KR+NF G
Sbjct: 72  SGQGVFRYLREFKFDAASEM-NLGDVLTVEQFTAGDFVDVTGTSIGKGFQGVIKRYNFRG 130

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
            RA+HG S  HR+ GS G    P RVFKNKKM G++G  +VT++ L+V+ VD    L+L+
Sbjct: 131 GRASHG-SRFHRAPGSIGASATPSRVFKNKKMPGQLGNTQVTMQCLQVIRVDADDNLLLI 189

Query: 192 KGCVPGAKKNSWILVRDSFKS 212
           KG +PG  +N+ +L+++S K+
Sbjct: 190 KGAIPG-HRNNIVLIKNSVKA 209


>gi|297564037|ref|YP_003683010.1| 50S ribosomal protein L3 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296848486|gb|ADH70504.1| 50S ribosomal protein L3 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 216

 Score =  251 bits (642), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 97/210 (46%), Positives = 127/210 (60%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            GV+  KLGMT V++  G+ +PVTVL    C V   RT D +GY A+Q+G G+   + V+
Sbjct: 7   KGVLGEKLGMTQVFDDAGKMVPVTVLKAGPCVVSRIRTPDTDGYSAIQLGYGQINPRKVN 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+  +  + +++P++   E R   D     +G   +   F  GQ VDVTG + GKGF+G
Sbjct: 67  KPLGDYLRAHDLTPRRHYVEVRTT-DATEYTLGQEVTADSFETGQKVDVTGKSKGKGFAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F GL A+HG    HRS GS G    PGRVFK  +MAGRMG  R TV+NL V SV
Sbjct: 126 VMKRHGFRGLSASHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNVRKTVQNLTVHSV 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D ++GLILVKG VPG      +LVR + K 
Sbjct: 186 DAEKGLILVKGAVPGPN-GGLVLVRTAVKG 214


>gi|146323695|ref|XP_752224.2| 50S ribosomal protein L3 [Aspergillus fumigatus Af293]
 gi|129557582|gb|EAL90186.2| 50S ribosomal protein L3 [Aspergillus fumigatus Af293]
 gi|159124862|gb|EDP49979.1| 50S ribosomal protein L3 [Aspergillus fumigatus A1163]
          Length = 317

 Score =  251 bits (642), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 102/215 (47%), Positives = 136/215 (63%), Gaps = 3/215 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GMT VY+   G+RI  TVL LD  QVV H+T   +GY AVQVGAG     
Sbjct: 92  LRTGAIAIKKGMTAVYDAETGKRIACTVLQLDRVQVVSHKTRQTHGYNAVQVGAGWKHPS 151

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV+K + G FS+  VSPK+ ++EFRV+ +  LLPVG   +  +F  GQ VD    + GKG
Sbjct: 152 NVTKSLLGHFSTNGVSPKRHVYEFRVKDESGLLPVGQTINADWFQEGQYVDARSYSKGKG 211

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKRH F G   +HGVS++HRS GS G  Q  G RV+  KKMAG MG  + TV+NL+
Sbjct: 212 FAGVMKRHGFHGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLK 271

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V+ VD   G+++V G V G  K   + ++D+ K  
Sbjct: 272 VLKVDADNGIVVVNGSVSGP-KGCVVRIQDAIKKP 305


>gi|325287048|ref|YP_004262838.1| 50S ribosomal protein L3 [Cellulophaga lytica DSM 7489]
 gi|324322502|gb|ADY29967.1| 50S ribosomal protein L3 [Cellulophaga lytica DSM 7489]
          Length = 205

 Score =  251 bits (642), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 89/206 (43%), Positives = 122/206 (59%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ RK+GMT +++  G+ IP TV+    C V   RT + +GY A+Q+G  +   K  +
Sbjct: 2   SGLIGRKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTEEVDGYNALQLGFDDKAEKRAN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F     SPKKK+ EF+    +    +G       F  G+ VDV G + GKGF G
Sbjct: 62  KAQMGHFKKAGTSPKKKVVEFQ--DFEGEYKLGDTVGVDQFVEGEFVDVVGTSKGKGFQG 119

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG  +ATHG     R+ GS G    P RVFK  KMAGRMGG RVTV+NL V  
Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGRMGGERVTVQNLRVYK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L++VKGCVPG  KN+++ ++
Sbjct: 180 VVPEKNLLVVKGCVPG-HKNAYVTIQ 204


>gi|238921442|ref|YP_002934957.1| hypothetical protein NT01EI_3594 [Edwardsiella ictaluri 93-146]
 gi|238871011|gb|ACR70722.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 199

 Score =  251 bits (641), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 90/201 (44%), Positives = 125/201 (62%), Gaps = 2/201 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT ++  +G  IPVTV+ ++  +V   + LD +GY A+QV  G  K   V+KP  G F+ 
Sbjct: 1   MTRIFTEDGVSIPVTVIEIEANRVTQVKDLDNDGYRAIQVTTGSKKANRVTKPEAGHFAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             V   + L EFR+ + ++   +G   S   F   + VDVTG++ GKGF+G +KR NF  
Sbjct: 61  AGVEAGRVLREFRLSEGEEFT-IGQNISVEIFADVKKVDVTGISKGKGFAGTVKRWNFRT 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
             ATHG S+SHR  GS G  Q PG+VFK KKMAG++G  RVTV++L+VV VD +R L+LV
Sbjct: 120 QDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVDAERNLLLV 179

Query: 192 KGCVPGAKKNSWILVRDSFKS 212
           KG VPGA     I V+ + K+
Sbjct: 180 KGAVPGATGGDLI-VKPAVKA 199


>gi|296141115|ref|YP_003648358.1| 50S ribosomal protein L3 [Tsukamurella paurometabola DSM 20162]
 gi|296029249|gb|ADG80019.1| 50S ribosomal protein L3 [Tsukamurella paurometabola DSM 20162]
          Length = 218

 Score =  251 bits (641), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 88/214 (41%), Positives = 125/214 (58%), Gaps = 2/214 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   R +PVTV+      V   RT   +GY AVQ+  G    + V+
Sbjct: 7   KGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQIRTEATDGYDAVQIAFGAIDPRKVN 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   V+P++ + E R+  D     VG       F+ G+ VDVTG++ GKG++G
Sbjct: 67  KPVSGQFAKAGVTPRRHIAELRI-ADTSEYEVGQELGADVFSGGEFVDVTGISKGKGYAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F GL A+HG    HR+ GS G    PGRVFK  +MAGRMG ++VT +NL V  V
Sbjct: 126 VMKRHGFAGLGASHGAQAVHRAPGSIGGCATPGRVFKGVRMAGRMGSDKVTTQNLTVFKV 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           D   G++L+KG +PG +K   ++VR + K     
Sbjct: 186 DADAGVLLIKGAIPG-RKGGLVMVRTAVKGGARA 218


>gi|186684510|ref|YP_001867706.1| 50S ribosomal protein L3 [Nostoc punctiforme PCC 73102]
 gi|226730541|sp|B2ITQ5|RL3_NOSP7 RecName: Full=50S ribosomal protein L3
 gi|186466962|gb|ACC82763.1| ribosomal protein L3 [Nostoc punctiforme PCC 73102]
          Length = 210

 Score =  251 bits (641), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 82/210 (39%), Positives = 123/210 (58%), Gaps = 3/210 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT +++  G  IPVTV+    C V   +T   +GY A+QVG GE K K 
Sbjct: 1   MSVGILGTKLGMTQIFDEAGVAIPVTVIQAGPCTVTQVKTKQTDGYFAIQVGFGEVKPKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P+ G  +  +    + L E+      D   +G       F+ GQ+VDV G +IG+GF
Sbjct: 61  LNRPLLGHLAKSSAPALRHLNEYHTDSSSD-YALGQQIKADIFSEGQIVDVVGTSIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KR+NFG    +HG S +HR+ GS G    PGRV+  K+MAGR+GG R+T++ L +V
Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGKRITIRKLTIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
            VD +R L+L+KG +PG    + + V  + 
Sbjct: 179 RVDAERNLLLIKGAIPGKP-GALVSVVPAK 207


>gi|163760799|ref|ZP_02167878.1| 50S ribosomal protein L3 [Hoeflea phototrophica DFL-43]
 gi|162281843|gb|EDQ32135.1| 50S ribosomal protein L3 [Hoeflea phototrophica DFL-43]
          Length = 223

 Score =  251 bits (641), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 136/209 (65%), Positives = 159/209 (76%), Gaps = 2/209 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT VYN  G  +PVTVL L+NCQVV  RT +KNGY AVQ+GAG AKVKN SK MRG F+ 
Sbjct: 1   MTRVYNDAGEHVPVTVLRLENCQVVAQRTEEKNGYTAVQLGAGVAKVKNTSKAMRGNFAI 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
            NV PK KL EFRV  D +L+ VG+  S S+F  GQLVDV+G+T GKGF+GAMKRH FGG
Sbjct: 61  ANVEPKAKLVEFRVSSD-NLIDVGAEISASHFVAGQLVDVSGVTQGKGFAGAMKRHGFGG 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
           LRATHGVS+SHRSHGSTG  QDPG+V+K KKMAG MG  RVT +NLE+VS D  RGLIL+
Sbjct: 120 LRATHGVSVSHRSHGSTGSNQDPGKVWKGKKMAGHMGQTRVTTQNLEIVSTDADRGLILI 179

Query: 192 KGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
           KG VPG+ K SWI+VRD+ KS +     +
Sbjct: 180 KGAVPGS-KGSWIVVRDAIKSGIPADAPL 207


>gi|46199630|ref|YP_005297.1| 50S ribosomal protein L3 [Thermus thermophilus HB27]
 gi|55981661|ref|YP_144958.1| 50S ribosomal protein L3 [Thermus thermophilus HB8]
 gi|1710559|sp|P52860|RL3_THETH RecName: Full=50S ribosomal protein L3
 gi|62287202|sp|Q5SHN8|RL3_THET8 RecName: Full=50S ribosomal protein L3
 gi|81830573|sp|Q72I04|RL3_THET2 RecName: Full=50S ribosomal protein L3
 gi|116668236|pdb|2J01|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Mrna, Trna And Paromomycin (Part 2 Of 4).
           This File Contains The 50s Subunit From Molecule I.
 gi|116668297|pdb|2J03|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Mrna, Trna And Paromomycin (Part 4 Of 4).
           This File Contains The 50s Subunit From Molecule Ii.
 gi|119389737|pdb|2HGJ|E Chain E, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
           Showing How The 16s 3'-End Mimicks Mrna E And P Codons.
           This Entry 2hgj Contains 50s Ribosomal Subunit. The 30s
           Ribosomal Subunit Can Be Found In Pdb Entry 2hgi.
 gi|119389794|pdb|2HGQ|E Chain E, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
           With Translocated And Rotated Shine-Dalgarno Duplex.
           This Entry 2hgq Contains 50s Ribosomal Subunit. The 30s
           Ribosomal Subunit Can Be Found In Pdb Entry 2hgp.
 gi|119389850|pdb|2HGU|E Chain E, 70s T.Th. Ribosome Functional Complex With Mrna And E- And
           P-Site Trnas At 4.5a. This Entry 2hgu Contains 50s
           Ribosomal Subunit. The 30s Ribosomal Subunit Can Be
           Found In Pdb Entry 2hgr.
 gi|149240888|pdb|1VSA|C Chain C, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals
           Functional Interactions And Rearrangements. This File,
           1vsa, Contains The 50s Ribosome Subunit. 30s Ribosome
           Subunit Is In The File 2ow8
 gi|157836523|pdb|2V47|E Chain E, Structure Of The Ribosome Recycling Factor Bound To The
           Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
           Trna-Fmet (Part 2 Of 4). This File Contains The 50s
           Subunit For Molecule 1.
 gi|157836579|pdb|2V49|E Chain E, Structure Of The Ribosome Recycling Factor Bound To The
           Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
           Trna-Fmet (Part 4 Of 4). This File Contains The 50s
           Subunit Of Molecule 2.
 gi|160285430|pdb|1VSP|C Chain C, Interactions And Dynamics Of The Shine-Dalgarno Helix In
           The 70s Ribosome. This File, 1vsp, Contains The 50s
           Ribosome Subunit. 30s Ribosome Subunit Is In The File
           2qnh
 gi|209156521|pdb|3D5B|E Chain E, Structural Basis For Translation Termination On The 70s
           Ribosome. This File Contains The 50s Subunit Of One 70s
           Ribosome. The Entire Crystal Structure Contains Two 70s
           Ribosomes As Described In Remark 400.
 gi|209156575|pdb|3D5D|E Chain E, Structural Basis For Translation Termination On The 70s
           Ribosome. This File Contains The 50s Subunit Of The
           Second 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes As Described In Remark 400.
 gi|211938857|pdb|2JL6|E Chain E, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome (Part 2 Of 4). This File
           Contains The 50s Subunit.
 gi|211938915|pdb|2JL8|E Chain E, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome (Part 4 Of 4). This File
           Contains The 50s Subunit.
 gi|218766798|pdb|3F1F|E Chain E, Crystal Structure Of A Translation Termination Complex
           Formed With Release Factor Rf2. This File Contains The
           50s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes As Described In
           Remark 400.
 gi|218766854|pdb|3F1H|E Chain E, Crystal Structure Of A Translation Termination Complex
           Formed With Release Factor Rf2. This File Contains The
           50s Subunit Of The Second 70s Ribosome. The Entire
           Crystal Structure Contains Two 70s Ribosomes As
           Described In Remark 400.
 gi|226887438|pdb|2WDI|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome In
           Complex With Mrna, Paromomycin, Acylated A-Site Trna,
           Deacylated P-Site Trna, And E-Site Trna. This File
           Contains The 50s Subunit For Molecule I.
 gi|226887470|pdb|2WDJ|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome In
           Complex With Mrna, Paromomycin, Acylated A-Site Trna,
           Deacylated P-Site Trna, And E-Site Trna. This File
           Contains The 50s Subunit For Molecule Ii.
 gi|226887527|pdb|2WDL|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome In
           Complex With Mrna, Paromomycin, Acylated A- And P-Site
           Trnas, And E-Site Trna.  This File Contains The 50s
           Subunit For Molecule I.
 gi|226887584|pdb|2WDN|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome In
           Complex With Mrna, Paromomycin, Acylated A- And P-Site
           Trnas, And E-Site Trna.  This File Contains The 50s
           Subunit For Molecule Ii.
 gi|237823568|pdb|2WH2|E Chain E, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome
 gi|237823627|pdb|2WH4|E Chain E, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome
 gi|260100014|pdb|3HUX|E Chain E, Structure Of Ef-P Bound To The 70s Ribosome; This File
           Contains The 50s Subunit For Molecule I.
 gi|260100070|pdb|3HUZ|E Chain E, Structure Of Ef-P Bound To The 70s Ribosome; This File
           Contains The 50s Subunit For Molecule Ii.
 gi|261824523|pdb|2WRJ|E Chain E, The Structure Of The Ribosome With Elongation Factor G
           Trapped In The Post-Translocational State (Part 2 Of 4).
 gi|261824585|pdb|2WRL|E Chain E, The Structure Of The Ribosome With Elongation Factor G
           Trapped In The Post-Translocational State. (Part 4 Of
           4).
 gi|261824648|pdb|2WRO|E Chain E, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
           And Trna (Part 2 Of 4).
 gi|261824707|pdb|2WRR|E Chain E, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
           And Trna (Part 4 Of 4).
 gi|281307195|pdb|3KIR|E Chain E, Structure Of Rele Nuclease Bound To The 70s Ribosome
           (Precleavage State; Part 2 Of 4)
 gi|281307253|pdb|3KIT|E Chain E, Structure Of Rele Nuclease Bound To The 70s Ribosome
           (Precleavage State; Part 4 Of 4)
 gi|281307311|pdb|3KIW|E Chain E, Structure Of Rele Nuclease Bound To The 70s Ribosome
           (Postcleavage State; Part 2 Of 4)
 gi|281307369|pdb|3KIY|E Chain E, Structure Of Rele Nuclease Bound To The 70s Ribosome
           (Postcleavage State; Part 4 Of 4)
 gi|288965633|pdb|3KNI|E Chain E, The Structures Of Viomycin Bound To The 70s Ribosome. This
           File Contains The 50s Subunit For Molecule I
 gi|288965665|pdb|3KNK|E Chain E, The Structures Of Viomycin Bound To The 70s Ribosome. This
           File Contains The 50s Subunit For Molecule Ii.
 gi|288965697|pdb|3KNM|E Chain E, The Structures Of Capreomycin Bound To The 70s Ribosome.
           Thi Contains The 50s Subunit For Molecule I.
 gi|288965729|pdb|3KNO|E Chain E, The Structures Of Capreomycin Bound To The 70s Ribosome.
           Thi Contains The 50s Subunit For Molecule Ii
 gi|294979477|pdb|3I8F|E Chain E, Elongation Complex Of The 70s Ribosome With Three Trnas
           And Entry 3i8f Contains 50s Ribosomal Subunit. The 30s
           Ribosoma Can Be Found In Pdb Entry 3i8g. Molecule B In
           The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f
           (50s).
 gi|294979557|pdb|3I8I|E Chain E, Elongation Complex Of The 70s Ribosome With Three Trnas
           And Entry 3i8i Contains 50s Ribosomal Subnit. The 30s
           Ribosomal Can Be Found In Pdb Entry 3i8h. Molecule A In
           The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g
           (30s).
 gi|294979615|pdb|3I9C|E Chain E, Initiation Complex Of 70s Ribosome With Two Trnas And
           Mrna. 3i9c Contains 50s Ribosomal Subunit Of Molecule B.
           The 30s Subunit Can Be Found In Pdb Entry 3i9b. Molecule
           A In The S Asymmetric Unit Is Deposited As 3i9d (30s)
           And 3i9e (50s)
 gi|294979669|pdb|3I9E|E Chain E, Initiation Complex Of 70s Ribosome With Two Trnas And
           Mrna. 3i9e Contains 50s Ribosomal Subunit Of Molecule A.
           The 30s Subunit Can Be Found In Pdb Entry 3i9d. Molecule
           B In The S Asymmetric Unit Is Deposited As 3i9b (30s)
           And 3i9c (50s)
 gi|295982114|pdb|2X9S|E Chain E, Structure Of The 70s Ribosome Bound To Release Factor 2
           And A Substrate Analog Provides Insights Into Catalysis
           Of Peptide Release
 gi|295982173|pdb|2X9U|E Chain E, Structure Of The 70s Ribosome Bound To Release Factor 2
           And A Substrate Analog Provides Insights Into Catalysis
           Of Peptide Release
 gi|300508632|pdb|3MRZ|D Chain D, Recognition Of The Amber Stop Codon By Release Factor Rf1.
           This Entry 3mrz Contains 50s Ribosomal Subunit. The 30s
           Ribosomal Subunit Can Be Found In Pdb Entry 3ms0.
           Molecule A In The Same Asymmetric Unit Is Deposited As
           3mr8 (50s) And 3ms1 (30s).
 gi|300508687|pdb|3MS1|D Chain D, Recognition Of The Amber Stop Codon By Release Factor Rf1.
           This Entry 3ms1 Contains 50s Ribosomal Subunit. The 30s
           Ribosomal Subunit Can Be Found In Pdb Entry 3mr8.
           Molecule B In The Same Asymmetric Unit Is Deposited As
           3mrz (50s) And 3ms0 (30s).
 gi|307568001|pdb|2XG0|E Chain E, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
           70s Ribosome (Part 2 Of 4)
 gi|307568059|pdb|2XG2|E Chain E, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
           70s Ribosome (Part 4 Of 4)
 gi|309320289|pdb|3OH5|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Chloramphenicol. This File Contains The
           50s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|309320319|pdb|3OH7|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Chloramphenicol. This File Contains The
           50s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|309320391|pdb|3OHJ|E Chain E, Structure Of The Thermus Thermophilus Ribosome Complexed
           With Erythromycin. This File Contains The 50s Subunit Of
           One 70s Ribosome. The Entire Crystal Structure Contains
           Two 70s Ribosomes.
 gi|309320421|pdb|3OHK|E Chain E, Structure Of The Thermus Thermophilus Ribosome Complexed
           With Erythromycin. This File Contains The 50s Subunit Of
           One 70s Ribosome. The Entire Crystal Structure Contains
           Two 70s Ribosomes.
 gi|309320472|pdb|3OHZ|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Azithromycin. This File Contains The 50s
           Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|309320523|pdb|3OI1|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Azithromycin. This File Contains The 50s
           Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|309320574|pdb|3OI3|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Telithromycin. This File Contains The 50s
           Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|309320625|pdb|3OI5|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Telithromycin. This File Contains The 50s
           Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|312207713|pdb|2XQE|E Chain E, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s
           Ribosome With A Gtp Analog
 gi|313754037|pdb|2XTG|E Chain E, Trna Tranlocation On The 70s Ribosome: The        Pre-
           Translocational Translocation Intermediate Ti(Pre)
 gi|313754095|pdb|2XUX|E Chain E, Trna Tranlocation On The 70s Ribosome: The Post-
           Translocational Translocation Intermediate Ti(Post)
 gi|325533442|pdb|2Y0V|E Chain E, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
           Near-Cognate Codon On The 70s Ribosome
 gi|325533501|pdb|2Y0X|E Chain E, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
           Near-Cognate Codon On The 70s Ribosome
 gi|325533560|pdb|2Y0Z|E Chain E, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
           A Near-Cognate Codon On The 70s Ribosome
 gi|325533619|pdb|2Y11|E Chain E, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
           Cognate Codon On The 70s Ribosome.
 gi|325533678|pdb|2Y13|E Chain E, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
           A Near-Cognate Codon On The 70s Ribosome
 gi|325533737|pdb|2Y15|E Chain E, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
           A Cognate Codon On The 70s Ribosome.
 gi|325533796|pdb|2Y17|E Chain E, Ef-Tu Complex 3
 gi|325533855|pdb|2Y19|E Chain E, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
           Cognate Codon On The 70s Ribosome.
 gi|1143612|emb|CAA86408.1| ribosomal protein L3 [Thermus thermophilus]
 gi|46197256|gb|AAS81670.1| LSU ribosomal protein L3P [Thermus thermophilus HB27]
 gi|55773074|dbj|BAD71515.1| 50S ribosomal protein L3 [Thermus thermophilus HB8]
          Length = 206

 Score =  251 bits (641), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 93/211 (44%), Positives = 125/211 (59%), Gaps = 7/211 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  K+GMT ++  + R +PVTV+    C VV  RT +K+GY AVQ+G      K V+
Sbjct: 2   KGILGVKVGMTRIFRDD-RAVPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLPQNPKRVN 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +P++G F+   V P + L E R     D  P G   +   F  G+ VDVTG + G+GF+G
Sbjct: 61  RPLKGHFAKAGVEPVRILREIR-----DFNPEGDTVTVEIFKPGERVDVTGTSKGRGFAG 115

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKR NF G   +HG    HR  GS G R+ PGRV+K KKMAG  G  RVTV NLEVV V
Sbjct: 116 VMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGHYGAERVTVMNLEVVDV 175

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             +  L+LVKG VPG      ++VR++ K+A
Sbjct: 176 IPEENLLLVKGAVPGPN-GGLVIVRETKKAA 205


>gi|224283709|ref|ZP_03647031.1| Ribosomal protein L3 [Bifidobacterium bifidum NCIMB 41171]
 gi|310288024|ref|YP_003939283.1| 50S ribosomal protein L3 [Bifidobacterium bifidum S17]
 gi|311064897|ref|YP_003971623.1| 50S ribosomal protein L3 RplC [Bifidobacterium bifidum PRL2010]
 gi|313140865|ref|ZP_07803058.1| 50S ribosomal protein L3 [Bifidobacterium bifidum NCIMB 41171]
 gi|309251961|gb|ADO53709.1| 50S ribosomal protein L3 [Bifidobacterium bifidum S17]
 gi|310867217|gb|ADP36586.1| RplC 50S ribosomal protein L3 [Bifidobacterium bifidum PRL2010]
 gi|313133375|gb|EFR50992.1| 50S ribosomal protein L3 [Bifidobacterium bifidum NCIMB 41171]
          Length = 217

 Score =  251 bits (641), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 118/211 (55%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
             ++ RKLGMT V++  G  +PVT++ +    V   ++ + +GY A+Q+G G+     V+
Sbjct: 9   KALLGRKLGMTQVWDENGFFVPVTLVDVSTNVVTAVKSEETDGYKAIQIGYGQIDPTKVT 68

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   V+P++ L E R  +D      G   S   F  G  VDVTG T GKGF+G
Sbjct: 69  KPLAGHFAKAGVTPRRHLVEVR-TEDAAEYEPGQELSIDAFAEGSEVDVTGTTKGKGFAG 127

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR  F   R THG   + R  GS G    P R+ K K+MAGRMG    TV++L V+S 
Sbjct: 128 TIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTATVQSLTVMSA 187

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D +  ++ +KG +PG  K   +LVR + K A
Sbjct: 188 DAENNVLAIKGAIPGP-KGGIVLVRTAVKGA 217


>gi|156848338|ref|XP_001647051.1| hypothetical protein Kpol_1050p50 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117734|gb|EDO19193.1| hypothetical protein Kpol_1050p50 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 271

 Score =  251 bits (641), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 103/216 (47%), Positives = 143/216 (66%), Gaps = 2/216 (0%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R GV+A+K GM   ++   G R   TVL L+N +V++HRTL  NGY A QVG G+    
Sbjct: 54  LRCGVIAQKKGMMPYFDENTGERTAATVLQLNNVEVLMHRTLKDNGYYACQVGFGDKDPS 113

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +VS+ M G F+S  V+PK+ + EFRV+ +  LLP+G++  PS+F  GQ VD+   + GKG
Sbjct: 114 HVSRQMLGHFASKIVNPKETVAEFRVKNESGLLPLGTLLKPSFFKPGQFVDLKSTSKGKG 173

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR +F GLRA+HG S+ HR  GS G  QDPGR+   KKM GRMGG  VT++N+++
Sbjct: 174 FQGVMKRFHFAGLRASHGTSVMHRHGGSFGQNQDPGRILPGKKMPGRMGGKNVTIQNVQI 233

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           + VDD+  +I+VKG V G  K S+I ++DS K    
Sbjct: 234 LKVDDENNVIIVKGSVAGP-KGSYIKLQDSIKKPPK 268


>gi|269219006|ref|ZP_06162860.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269212117|gb|EEZ78457.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 221

 Score =  251 bits (641), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 93/211 (44%), Positives = 130/211 (61%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
             ++  KLGMT +++  GR +P+TV+ +    V   RT + +GY AVQ+ +GE K KNV+
Sbjct: 13  KALLGTKLGMTQLWDEAGRVVPITVVRVGTNVVTQIRTPETDGYSAVQLASGELKTKNVT 72

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F    V+P++KL E R   D     +G   +   F  GQ VDV G + GKGF+G
Sbjct: 73  KPLQGHFDKAGVAPRRKLAEIRTS-DAAEYELGQELTADLFEAGQKVDVIGTSKGKGFAG 131

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    P RVF+  +MAGRMG +RVTV NL V +V
Sbjct: 132 VMKRHGFSGVSASHGAHRNHRKPGSIGACATPSRVFRGLRMAGRMGKDRVTVLNLPVHAV 191

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++G+IL+ G VPG  K   ++VR + K A
Sbjct: 192 DVEKGIILLAGAVPG-NKGGTVVVRTAVKGA 221


>gi|89893217|ref|YP_516704.1| 50S ribosomal protein L3 [Desulfitobacterium hafniense Y51]
 gi|123397902|sp|Q250N2|RL3_DESHY RecName: Full=50S ribosomal protein L3
 gi|89332665|dbj|BAE82260.1| 50S ribosomal protein L3 [Desulfitobacterium hafniense Y51]
          Length = 212

 Score =  251 bits (641), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 129/212 (60%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +  G++ +K+GMT V+  EG  IPVTV+    C V+  +T   +GY A+QVG G  + + 
Sbjct: 4   VSKGILGKKVGMTQVFTEEGHLIPVTVVEAGPCYVIQKKTKATDGYNAIQVGFGALRERL 63

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  +V P + + EFRV  D +   +G V +   F  G  VDV G++ GKGF
Sbjct: 64  ANKPQKGHVAKASVKPMRYIREFRVD-DVEAYEIGQVITAELFAAGDAVDVVGISKGKGF 122

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH        HG S  HR  GS G +  P RVFK + + GRMGG RVTV+NL+VV
Sbjct: 123 AGMIKRHGASRGPMKHG-SKYHRRTGSLGAKG-PARVFKGRNLPGRMGGERVTVQNLKVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD  + +ILVKG VPGAKK S ++++ S K+
Sbjct: 181 RVDADKNMILVKGAVPGAKK-SLLILKPSVKA 211


>gi|154498883|ref|ZP_02037261.1| hypothetical protein BACCAP_02875 [Bacteroides capillosus ATCC
           29799]
 gi|150271723|gb|EDM98949.1| hypothetical protein BACCAP_02875 [Bacteroides capillosus ATCC
           29799]
          Length = 240

 Score =  251 bits (641), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 81/210 (38%), Positives = 119/210 (56%), Gaps = 2/210 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ +K+GMT +++  G+ IPVTV+    C V   +T++K+GY AVQ+G  +   + 
Sbjct: 1   MEKAIIGKKVGMTQIFDEAGKVIPVTVIEAGPCVVTQKKTVEKDGYTAVQLGFEDVPERK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP  G      VS K+ L EF +  + + L +G       F  G  VDVTG++ GKG+
Sbjct: 61  LTKPELGHLKKAGVSAKRVLKEFAL-NNAESLNIGDEVKADAFAAGDRVDVTGISKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH    L+ +HG    HR  GS     DP R+FK K  AG+MG  +VTV NL+VV
Sbjct: 120 AGVIKRHGAHRLKESHGTGPVHRHAGSMSANSDPSRIFKGKIGAGQMGNEQVTVLNLDVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
            VD +  LI V G +PG  K   + +R S 
Sbjct: 180 KVDPELNLIAVCGAIPGP-KGGIVCLRSSV 208


>gi|119718125|ref|YP_925090.1| 50S ribosomal protein L3P [Nocardioides sp. JS614]
 gi|166990937|sp|A1SNL8|RL3_NOCSJ RecName: Full=50S ribosomal protein L3
 gi|119538786|gb|ABL83403.1| LSU ribosomal protein L3P [Nocardioides sp. JS614]
          Length = 223

 Score =  251 bits (641), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 92/218 (42%), Positives = 127/218 (58%), Gaps = 2/218 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   R +PVTV+      V   RT   +GY A+QVG GE   + V+
Sbjct: 8   KGLLGTKLGMTQVWDENNRVVPVTVIAAGTNVVTQVRTPATDGYNAIQVGYGEIDGRKVT 67

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F     +P++ L E R     D   VG   +   F  G+ +DVTG + GKGF+G
Sbjct: 68  KPQAGHFGKAGTTPRRHLVEIRTALAAD-YTVGQELAVDTFAAGEEIDVTGTSKGKGFAG 126

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    PGRVFK  +MAGRMG + VT +N+ V +V
Sbjct: 127 TMKRHGFAGVSASHGAHRNHRKPGSIGACATPGRVFKGVRMAGRMGTDTVTTQNVTVHAV 186

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
           D  +GLIL+KG VPG  K   +++R + KS++    +V
Sbjct: 187 DTAKGLILLKGAVPGP-KGGLVVLRSAAKSSLTSGKEV 223


>gi|303233143|ref|ZP_07319816.1| 50S ribosomal protein L3 [Atopobium vaginae PB189-T1-4]
 gi|302480728|gb|EFL43815.1| 50S ribosomal protein L3 [Atopobium vaginae PB189-T1-4]
          Length = 221

 Score =  251 bits (641), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 87/209 (41%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M + ++ RK+GMT V++     +PVTV+    C V   +T   +GY A+Q+G GE   K+
Sbjct: 16  MVTTILGRKIGMTQVWDENDNVVPVTVIQAGPCVVSQVKTKSSDGYDAIQIGFGEVSSKH 75

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM G F + NV P + L E RV+  ++    G   +   F     VDVTG++ GKGF
Sbjct: 76  VNKPMEGHFKAHNVEPLRHLCEVRVENGEEH-ACGDTITVKDFADATAVDVTGVSKGKGF 134

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF      HG S + R  GS G    PGRV K   MAG MG  R+TVKNL++V
Sbjct: 135 QGTIKRWNFSSGPKAHG-SRNQREPGSIGQCAYPGRVRKGLHMAGHMGDERITVKNLKLV 193

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            +D+++ L+LVKG VPG  KN+ + +R +
Sbjct: 194 RIDEEQNLLLVKGAVPGG-KNALLTIRMA 221


>gi|237743899|ref|ZP_04574380.1| LSU ribosomal protein L3P [Fusobacterium sp. 7_1]
 gi|229432930|gb|EEO43142.1| LSU ribosomal protein L3P [Fusobacterium sp. 7_1]
          Length = 211

 Score =  251 bits (641), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT ++  +G+ IPVTV+      V+  +T +K+GY+A+Q+G  E K KN +
Sbjct: 2   SGILGKKIGMTQIF-EDGKFIPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   V P++ + E  V+  D    +G             VD+TG + GKG SG
Sbjct: 61  KPLMGIFNKAGVKPQRFVKELAVESVDG-YELGQEIKVDVLAEVGYVDITGTSKGKGTSG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGG RA+HGVS +HR  GS G    PG+V K K+MAG+ G   VTV+NL+VV V
Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D +  L+L+KG VPGA KNS+++++ + K  +
Sbjct: 180 DAEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210


>gi|228472276|ref|ZP_04057042.1| 50S ribosomal protein L3 [Capnocytophaga gingivalis ATCC 33624]
 gi|228276479|gb|EEK15203.1| 50S ribosomal protein L3 [Capnocytophaga gingivalis ATCC 33624]
          Length = 205

 Score =  251 bits (641), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 86/205 (41%), Positives = 129/205 (62%), Gaps = 4/205 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP T++    C V   RT + +GY A+Q+G  + K K+ S
Sbjct: 2   SGLIGKKVGMTSIFDENGKNIPCTIIEAGPCVVTQVRTKEVDGYEALQLGFDDKKEKHTS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F+   V+PKKKL EF+  +      +G   +  +F  G+ VDVTG + GKGF G
Sbjct: 62  KAAAGHFAKAGVTPKKKLVEFQGFE--STYKLGDTITAEFFVEGEFVDVTGTSKGKGFQG 119

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            ++RH FGG  ++THG     R+ GS G    P RVFK  +MAGRMG  +VTV+NL+V+ 
Sbjct: 120 VVRRHGFGGVGQSTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           V  ++ LI++KGCVPG  KN+++ +
Sbjct: 180 VIPEKNLIILKGCVPG-HKNAYVTI 203


>gi|269796255|ref|YP_003315710.1| 50S ribosomal protein L3P [Sanguibacter keddieii DSM 10542]
 gi|269098440|gb|ACZ22876.1| LSU ribosomal protein L3P [Sanguibacter keddieii DSM 10542]
          Length = 219

 Score =  250 bits (640), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 92/211 (43%), Positives = 127/211 (60%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           + V+  KLGMT V++  GR +PVTV+ +    V   RT + +GY AVQ+  G+   + VS
Sbjct: 11  TAVLGTKLGMTQVWDEAGRLVPVTVVQVGTNVVTQVRTAELDGYAAVQLAYGQIDPRKVS 70

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +P++G F    V+P++ + E R   D     +G   +   F  G +VDV G T GKGF+G
Sbjct: 71  QPLKGHFEKAGVTPRRHVTEIRTS-DAGEFTLGQELTAEAFASGSVVDVIGTTKGKGFAG 129

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    P RVFK  +MAGRMG +R T +NL V +V
Sbjct: 130 VMKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGVRMAGRMGVDRQTTQNLTVHAV 189

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+LVKG VPG  K   +LVR + K A
Sbjct: 190 DAEKGLLLVKGAVPGP-KGGVVLVRSAAKGA 219


>gi|119501322|ref|XP_001267418.1| 50S ribosomal protein L3 [Neosartorya fischeri NRRL 181]
 gi|119415583|gb|EAW25521.1| 50S ribosomal protein L3 [Neosartorya fischeri NRRL 181]
          Length = 297

 Score =  250 bits (640), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 102/215 (47%), Positives = 137/215 (63%), Gaps = 3/215 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GMT VY+   G+RI  TVL LD  QVV H+T   +GY AVQVGAG     
Sbjct: 72  LRTGAIAIKKGMTAVYDAETGKRIACTVLQLDRVQVVSHKTRQTHGYNAVQVGAGWKHPS 131

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV+K + G FS+  VSPK+ ++EFRV+ +  LLPVG   +  +F  GQ VD    + GKG
Sbjct: 132 NVTKSLLGHFSTNGVSPKRHIYEFRVKDESGLLPVGQTINADWFQEGQYVDARSNSKGKG 191

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKRH F G   +HGVS++HRS GS G  Q  G RV+  KKMAG MG  + TV+NL+
Sbjct: 192 FAGVMKRHGFHGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLK 251

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V+ VD + G+++V G V G  K   + ++D+ K  
Sbjct: 252 VLKVDAENGIVVVNGSVSGP-KGCVVRIQDAIKKP 285


>gi|163791666|ref|ZP_02186061.1| 50S ribosomal protein L3 [Carnobacterium sp. AT7]
 gi|159873045|gb|EDP67154.1| 50S ribosomal protein L3 [Carnobacterium sp. AT7]
          Length = 210

 Score =  250 bits (640), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 91/213 (42%), Positives = 126/213 (59%), Gaps = 4/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+   G  IPVTV+      V+  +T++ +GY AVQ+G  E +   
Sbjct: 1   MTKGILGKKVGMTQVFTESGELIPVTVIEATPNVVLQVKTMETDGYEAVQLGYQEKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP  G  +  N +PK+ + EF          VG       F VG +V+VTG T GKGF
Sbjct: 61  SNKPAMGHVAKANATPKRFIREFN-DVVLGEYEVGQEVKVDTFAVGDIVNVTGTTKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       +HG S  HR  GS G   DP RVFK   + GRMGGNRVT+KNLE+V
Sbjct: 120 QGVIKRHGHSRGPMSHG-SRHHRRPGSMGPV-DPNRVFKRTLLPGRMGGNRVTIKNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           SVD ++ ++L+KG VPG+KK S I ++ +F+ A
Sbjct: 178 SVDVEKNVLLIKGNVPGSKK-SLIQIKSAFQKA 209


>gi|70725803|ref|YP_252717.1| 50S ribosomal protein L3 [Staphylococcus haemolyticus JCSC1435]
 gi|82581592|sp|Q4L8B4|RL3_STAHJ RecName: Full=50S ribosomal protein L3
 gi|68446527|dbj|BAE04111.1| 50S ribosomal protein L3 [Staphylococcus haemolyticus JCSC1435]
          Length = 220

 Score =  250 bits (640), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 91/221 (41%), Positives = 120/221 (54%), Gaps = 11/221 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+QVG        
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKKAYK 60

Query: 54  -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
                 K  +KP  G       +PK+ + EFR    D+   VG   +   F  G ++DVT
Sbjct: 61  KDAKSNKYANKPAEGHAKKAGAAPKRFIREFRNVNVDE-YEVGQEVTVDTFEAGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G + GKGF GA+KRH        HG    HR+ GS G   D  RVFK +KM GRMGGN V
Sbjct: 120 GTSKGKGFQGAIKRHGQARGPMAHGSH-FHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           TV+NLEVV VD +  +ILVKG VPG KK  ++ ++ S K  
Sbjct: 179 TVQNLEVVQVDTENNVILVKGNVPGPKKG-FVEIQTSIKKG 218


>gi|124026708|ref|YP_001015823.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. NATL1A]
 gi|166233176|sp|A2C4Z9|RL3_PROM1 RecName: Full=50S ribosomal protein L3
 gi|123961776|gb|ABM76559.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. NATL1A]
          Length = 218

 Score =  250 bits (640), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 79/217 (36%), Positives = 129/217 (59%), Gaps = 3/217 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +GR +PVT++    C++   ++ D +GY AVQ+G    + K 
Sbjct: 1   MSLGILGKKLGMSQLFDDQGRAVPVTLIEAGPCRITQLKSADTDGYAAVQIGFQLIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G  +       + L E+RV+   +   +G+  +   F  GQ VDV+G T+G+GF
Sbjct: 61  INKPSKGHLAKSGNDLLRHLREYRVENSSE-FELGASITVDDFEKGQKVDVSGDTMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     +HG S +HR  GS G    PGRV+  K+MAGRMGG +VT + LE++
Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHRLPGSIGAGTTPGRVYPGKRMAGRMGGKKVTTRALEIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
            +D    L++VKG VPG    S + +R + +  V+ +
Sbjct: 179 KIDTNHNLLVVKGSVPGKP-GSLLNIRPAKRVGVSIQ 214


>gi|303287272|ref|XP_003062925.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455561|gb|EEH52864.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 221

 Score =  250 bits (640), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 104/212 (49%), Positives = 138/212 (65%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G +A K+GMT  +N  G R+P+TVL +D C+VV  +T +K GY A+Q+GAG  K K +
Sbjct: 5   RVGALAVKVGMTQEWNEHGARVPLTVLWIDECEVVQAKTPEKEGYAALQMGAGSKKRKQI 64

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +    G F++  V  K++L EFRV  D  +LPVG+V   S+F  GQ VD+ G TIGKGF 
Sbjct: 65  TGAEYGHFAARGVQIKRELSEFRVTPD-AILPVGTVVDASHFLAGQYVDIQGKTIGKGFQ 123

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR  F GL A+HG +  HR+HGS G  QDPGRV+K KKMAG+MG    TV+N  V  
Sbjct: 124 GPMKRWGFAGLPASHGTTKKHRAHGSIGNSQDPGRVWKGKKMAGQMGNRTRTVQNCFVYR 183

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           VD +R LI V G VPG + N ++ V+D+ +  
Sbjct: 184 VDPERNLIYVVGQVPGKRGN-FVRVKDALRKG 214


>gi|302669961|ref|YP_003829921.1| ribosomal protein L3 RplC [Butyrivibrio proteoclasticus B316]
 gi|302394434|gb|ADL33339.1| ribosomal protein L3 RplC [Butyrivibrio proteoclasticus B316]
          Length = 227

 Score =  250 bits (640), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 86/227 (37%), Positives = 123/227 (54%), Gaps = 19/227 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A K+GMT ++  +G  +PVTVL    C V   +T++ +GY AVQVG  + K K 
Sbjct: 1   MKKAILATKVGMTQIFKEDGSLVPVTVLQAGPCVVTQIKTVENDGYSAVQVGFVDKKEKV 60

Query: 61  VSK----------------PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
           V+K                  +G F    VS K+ + EF+++   D   +G+      F 
Sbjct: 61  VNKDKNGNKTIYHRHGATKAEQGHFKKAGVSCKRYVREFKLENAAD-YALGAEIKADVFA 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  +D T ++ GKGF GA+K++        HG S  HR  GS G   DP RVFK K M 
Sbjct: 120 EGDKIDATAISKGKGFQGAIKKNGQHRGPMAHG-SKFHRHQGSNGSSSDPSRVFKGKGMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           G MG  +VTV+NLEVV VD  + LILVKG +PG KK   + ++++ K
Sbjct: 179 GHMGSVKVTVQNLEVVRVDADKNLILVKGAIPGPKKG-LVTIKETVK 224


>gi|257069508|ref|YP_003155763.1| 50S ribosomal protein L3P [Brachybacterium faecium DSM 4810]
 gi|256560326|gb|ACU86173.1| LSU ribosomal protein L3P [Brachybacterium faecium DSM 4810]
          Length = 226

 Score =  250 bits (640), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 96/213 (45%), Positives = 132/213 (61%), Gaps = 2/213 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SGV+  KLGMT V++  G+ +PVTV+      V   R+++ +GY AVQ+  G+   + VS
Sbjct: 14  SGVLGTKLGMTQVWDENGKLVPVTVVQTGANVVTQIRSVETDGYDAVQIAFGQIDPRKVS 73

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +P+RG F    V+P++ L E R     +   +G     S F  GQ VDV G + GKG +G
Sbjct: 74  QPLRGHFEKAGVTPRRHLVELRTVNAAE-YTLGQEIDASVFEAGQKVDVVGTSKGKGTAG 132

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    PGRVFK ++MAGRMGG+R +V+NL V +V
Sbjct: 133 VMKRHGFAGVGASHGQHRNHRKPGSIGGASTPGRVFKGQRMAGRMGGDRTSVQNLTVHAV 192

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           D ++GL+LVKG VPGA K   +LVR + KS   
Sbjct: 193 DVEKGLVLVKGAVPGA-KGGLVLVRSAVKSPAK 224


>gi|30248418|ref|NP_840488.1| ribosomal protein L3 [Nitrosomonas europaea ATCC 19718]
 gi|42559613|sp|Q82X88|RL3_NITEU RecName: Full=50S ribosomal protein L3
 gi|30138304|emb|CAD84312.1| Ribosomal protein L3 [Nitrosomonas europaea ATCC 19718]
          Length = 215

 Score =  250 bits (640), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 96/216 (44%), Positives = 130/216 (60%), Gaps = 2/216 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +K+GMT V+   G  IPVTVL +   +VV  +T +K+GY AVQ+  G  +   
Sbjct: 1   MKLGLIGKKIGMTRVFTESGNSIPVTVLDVSGNRVVQVKTEEKDGYSAVQLTQGYRRKNR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++K + G FS   V     + EFRV  D    + +GS  S   F VG  VDV G++IGKG
Sbjct: 61  ITKALSGHFSQAGVEAGTVIKEFRVDHDIGSDIKIGSEISVELFEVGSKVDVCGISIGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KRHNF   RA+HG S SH   GS G  QDPGRVF  KKM G +G  + TV+N+EV
Sbjct: 121 YAGTIKRHNFSSSRASHGNSRSHNVPGSIGMAQDPGRVFPGKKMTGHLGNAQCTVQNIEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           V VD  RGL+ +KG VPG+K N  + +R   K    
Sbjct: 181 VRVDAGRGLLFLKGSVPGSKGNG-VFIRPGVKQPSK 215


>gi|225011647|ref|ZP_03702085.1| ribosomal protein L3 [Flavobacteria bacterium MS024-2A]
 gi|225004150|gb|EEG42122.1| ribosomal protein L3 [Flavobacteria bacterium MS024-2A]
          Length = 205

 Score =  250 bits (639), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 89/206 (43%), Positives = 128/206 (62%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++ +G+ IP TVL L  C V   RT   +GY A+Q+G  +   K V+
Sbjct: 2   SGLIGKKIGMTSLFDEKGKNIPCTVLELGPCVVTQVRTTAVDGYEALQLGFDDKAEKKVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F   N  PKKKL EF+    ++ L +G   +  +F  G+ VDV+G + GKGF G
Sbjct: 62  KAAAGHFKKANSVPKKKLVEFQ--NFEEELNLGDTITVEHFNEGEFVDVSGTSKGKGFQG 119

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH F G  +ATHG     R+ GS G    P RVFK  +MAG+MG  +V V+NL VV 
Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGQMGNVKVKVQNLRVVK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L++VKGCVPG  KN++++V+
Sbjct: 180 VVPEKNLLVVKGCVPG-HKNAYVIVQ 204


>gi|282899952|ref|ZP_06307913.1| Ribosomal protein L3 [Cylindrospermopsis raciborskii CS-505]
 gi|281195222|gb|EFA70158.1| Ribosomal protein L3 [Cylindrospermopsis raciborskii CS-505]
          Length = 212

 Score =  250 bits (639), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 91/211 (43%), Positives = 126/211 (59%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT +++  G  IPVTV+    C V   +T   +GY A+QVG GE K K 
Sbjct: 1   MSVGILGTKLGMTQIFDEAGVSIPVTVIQAGPCTVTQVKTQPTDGYCAIQVGYGEVKPKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP  G  +  +  P + L E+R     D   +G       F+VGQ+VDV G +IG+GF
Sbjct: 61  LNKPKLGHLAKSSAGPVRYLNEYRTDAAGD-YALGQEIKADIFSVGQIVDVIGTSIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KR+NFG    +HG S +HR+ GS G    PGRV+  K+MAGR+GG+RVTV+ L VV
Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGSRVTVRKLTVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R LIL+KG +PG      + V  + K
Sbjct: 179 KVDAERNLILIKGAIPGKP-GGLVNVVPTTK 208


>gi|73661972|ref|YP_300753.1| 50S ribosomal protein L3 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|82581593|sp|Q49ZG8|RL3_STAS1 RecName: Full=50S ribosomal protein L3
 gi|72494487|dbj|BAE17808.1| 50S ribosomal protein L3 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 219

 Score =  250 bits (639), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 89/220 (40%), Positives = 124/220 (56%), Gaps = 11/220 (5%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      ++  ++ + +GY A+QVG  + +   
Sbjct: 1   MTKGILGRKIGMTQVFGENGDLIPVTVVEASQNVILQKKSEEIDGYNAIQVGYEDKQAYK 60

Query: 61  V--------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
                    +KP  G       +PK+ + EFR    D+   VG   S + F  G ++DVT
Sbjct: 61  KDSRSSKYANKPAEGHAKKAGTAPKRFIREFRNVNVDE-YEVGQEVSVNTFEAGDVIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRHN      +HG    HR+ GS G   D  RVFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHNQARGPMSHGSH-FHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           TV+NLEVV +D +  +ILVKG VPG KK  ++ +  S K 
Sbjct: 179 TVQNLEVVQIDAENNVILVKGNVPGPKKG-FVEITSSIKG 217


>gi|72382967|ref|YP_292322.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. NATL2A]
 gi|109893537|sp|Q46IQ9|RL3_PROMT RecName: Full=50S ribosomal protein L3
 gi|72002817|gb|AAZ58619.1| LSU ribosomal protein L3P [Prochlorococcus marinus str. NATL2A]
          Length = 218

 Score =  250 bits (639), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 77/217 (35%), Positives = 127/217 (58%), Gaps = 3/217 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +GR +PVT++    C++   ++ D +GY AVQ+G    + K 
Sbjct: 1   MSLGILGKKLGMSQLFDDQGRAVPVTLIEAGPCRITQLKSADTDGYAAVQIGFQLIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G  +       + L E+RV+   +   +G+  +   F  GQ VD++G T+G+GF
Sbjct: 61  INKPSKGHLAKSGNDLLRHLREYRVENSSE-FELGASITVDDFEKGQKVDISGDTMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     +HG S +HR  GS G    PGRV+  K+MAGRMGG +VT + LE++
Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHRLPGSIGAGTTPGRVYPGKRMAGRMGGKKVTTRALEIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
            +D    L++VKG VPG    S + +R + +     +
Sbjct: 179 KIDTNHNLLVVKGSVPGKP-GSLLNIRPAKRVGAPTQ 214


>gi|305665137|ref|YP_003861424.1| 50S ribosomal protein L3 [Maribacter sp. HTCC2170]
 gi|88709889|gb|EAR02121.1| 50S ribosomal protein L3 [Maribacter sp. HTCC2170]
          Length = 207

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 83/206 (40%), Positives = 123/206 (59%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ +P TV+    C V   RT + +GY A+Q+G  +   K  +
Sbjct: 2   SGLIGKKVGMTSIFDENGKNVPCTVIEAGPCVVTQVRTEEVDGYSALQLGFDDKAEKRAN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F     SPKKK+ EF+  + +    +G       F  G+ VDV G + GKGF G
Sbjct: 62  KAESGHFKKAGASPKKKVVEFQGFEGE--YKLGDTIGVDVFVEGEFVDVVGTSKGKGFQG 119

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH F G  +ATHG     R+ GS G    P RVFK  +MAGRMGG+R TV+NL V+ 
Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGDRTTVQNLRVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           +  ++ L++VKGCVPG  KN+++ ++
Sbjct: 180 IVPEKNLLVVKGCVPG-HKNAYVTIK 204


>gi|154494380|ref|ZP_02033700.1| hypothetical protein PARMER_03735 [Parabacteroides merdae ATCC
           43184]
 gi|218262297|ref|ZP_03476811.1| hypothetical protein PRABACTJOHN_02485 [Parabacteroides johnsonii
           DSM 18315]
 gi|154085824|gb|EDN84869.1| hypothetical protein PARMER_03735 [Parabacteroides merdae ATCC
           43184]
 gi|218223448|gb|EEC96098.1| hypothetical protein PRABACTJOHN_02485 [Parabacteroides johnsonii
           DSM 18315]
          Length = 205

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 87/204 (42%), Positives = 124/204 (60%), Gaps = 4/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EG+ +P TV+ +  C V   +TL+K+GY AVQ+G  E K K+ ++
Sbjct: 3   GLLGKKIGMTSVFSAEGKNLPCTVIEVGPCVVTQIKTLEKDGYEAVQLGFEEKKEKHTTQ 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+PK+ L EF+    +    +G V +  Y      VDV G + GKGF G 
Sbjct: 63  PEMGHFKKAGVTPKRYLAEFK--NFETEYKLGDVITVDYLEDAGFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  + THG     R+ G  G    P +VFK  +MAG+MG  RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRLRAPGGIGACSYPAKVFKGMRMAGQMGNERVTVQNLQVIKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
             +  L+LVKG VPGA K S +L+
Sbjct: 181 MPEHNLLLVKGSVPGA-KGSILLI 203


>gi|294786411|ref|ZP_06751665.1| 50S ribosomal protein L3 [Parascardovia denticolens F0305]
 gi|315225973|ref|ZP_07867761.1| 50S ribosomal protein L3 [Parascardovia denticolens DSM 10105]
 gi|294485244|gb|EFG32878.1| 50S ribosomal protein L3 [Parascardovia denticolens F0305]
 gi|315120105|gb|EFT83237.1| 50S ribosomal protein L3 [Parascardovia denticolens DSM 10105]
          Length = 217

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 85/212 (40%), Positives = 121/212 (57%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+ +V +KLGM+ +++  G  +PVT++ +    V   ++ D++GY AVQ+G G      V
Sbjct: 7   RTALVGKKLGMSQIWDENGFFVPVTLVDVSTNVVTAVKSEDRDGYKAVQLGYGAIDPTKV 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G F+   V+P++ L E R +      P G   +   F+ G  VDVTG T GKGF+
Sbjct: 67  TKPLAGHFAKAGVTPRRHLVEVRTEDAGSYQP-GQELAADTFSDGDQVDVTGTTKGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F   R THG   + R  GS G    P RV K K+MAGRMG    T + L VVS
Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSIGACATPSRVLKGKRMAGRMGHVTHTTQGLTVVS 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D + GLI +KG +PG  K + +LVR + K A
Sbjct: 186 ADVENGLIAIKGAIPGP-KGAIVLVRSAVKGA 216


>gi|256027490|ref|ZP_05441324.1| 50S ribosomal protein L3P [Fusobacterium sp. D11]
 gi|260495203|ref|ZP_05815331.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_33]
 gi|289765452|ref|ZP_06524830.1| LSU ribosomal protein L3P [Fusobacterium sp. D11]
 gi|260197260|gb|EEW94779.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_33]
 gi|289717007|gb|EFD81019.1| LSU ribosomal protein L3P [Fusobacterium sp. D11]
          Length = 211

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 90/212 (42%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT ++  +G+ +PVTV+      V+  +T +K+GY+A+Q+G  E K KN +
Sbjct: 2   SGILGKKIGMTQIF-EDGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   V P++ + E  V+  D    +G             VD+TG + GKG SG
Sbjct: 61  KPLMGIFNKAGVKPQRFVKELAVESVDG-YELGQEIKVDVLAEVGYVDITGTSKGKGTSG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGG RA+HGVS +HR  GS G    PG+V K K+MAG+ G   VTV+NL+VV V
Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D +  L+L+KG VPGA KNS+++++ + K  +
Sbjct: 180 DAEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210


>gi|322812575|pdb|3PYO|D Chain D, Crystal Structure Of A Complex Containing Domain 3 From
           The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
           File Contains The 50s Subunit Of The First 70s Ribosome.
 gi|322812628|pdb|3PYR|D Chain D, Crystal Structure Of A Complex Containing Domain 3 From
           The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
           File Contains The 50s Subunit Of The Second 70s
           Ribosome.
 gi|322812681|pdb|3PYT|D Chain D, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
           Igr Ires Rna Bound To The 70s Ribosome. This File
           Contains The 50s Subunit Of The First 70s Ribosome.
 gi|322812734|pdb|3PYV|D Chain D, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
           Igr Ires Rna Bound To The 70s Ribosome. This File
           Contains The 50s Subunit Of The Second 70s Ribosome
          Length = 204

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 92/210 (43%), Positives = 124/210 (59%), Gaps = 7/210 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  K+GMT ++  + R +PVTV+    C VV  RT +K+GY AVQ+G      K V+
Sbjct: 2   KGILGVKVGMTRIFRDD-RAVPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLPQNPKRVN 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +P++G F+   V P + L E R     D  P G   +   F  G+ VDVTG + G+GF+G
Sbjct: 61  RPLKGHFAKAGVEPVRILREIR-----DFNPEGDTVTVEIFKPGERVDVTGTSKGRGFAG 115

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKR NF G   +HG    HR  GS G R+ PGRV+K KKMAG  G  RVTV NLEVV V
Sbjct: 116 VMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGHYGAERVTVMNLEVVDV 175

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
             +  L+LVKG VPG      ++VR++ K+
Sbjct: 176 IPEENLLLVKGAVPGPN-GGLVIVRETKKA 204


>gi|87300913|ref|ZP_01083755.1| 50S ribosomal protein L3 [Synechococcus sp. WH 5701]
 gi|87284784|gb|EAQ76736.1| 50S ribosomal protein L3 [Synechococcus sp. WH 5701]
          Length = 215

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 82/216 (37%), Positives = 125/216 (57%), Gaps = 3/216 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++  G+ IPVTV+    C++   +T   +GY A Q+G GE + K 
Sbjct: 1   MSFGILGKKLGMSQFFDPNGKSIPVTVIEAGPCRITQLKTPATDGYSAAQIGFGETRDKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP  G  +       + L E+R++  D  L +G+  +   F  GQ VDV+G T+G+GF
Sbjct: 61  VNKPAAGHLAKSGDELLRHLQEYRLESLDG-LELGASITVEAFEAGQKVDVSGDTVGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRH F     +HG S +HR  GSTG    PGRV+  K+MAGR GG ++T + L ++
Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHREPGSTGAGTTPGRVYPGKRMAGRYGGKQITTRGLTIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            VD +R L++VKG VPG    + + +R + +     
Sbjct: 179 KVDHERNLLVVKGSVPGKP-GALLSIRPALRVGAKA 213


>gi|120609041|ref|YP_968719.1| 50S ribosomal protein L3 [Acidovorax citrulli AAC00-1]
 gi|326315224|ref|YP_004232896.1| 50S ribosomal protein L3 [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|166233109|sp|A1TJ07|RL3_ACIAC RecName: Full=50S ribosomal protein L3
 gi|120587505|gb|ABM30945.1| LSU ribosomal protein L3P [Acidovorax citrulli AAC00-1]
 gi|323372060|gb|ADX44329.1| 50S ribosomal protein L3 [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 224

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 85/214 (39%), Positives = 127/214 (59%), Gaps = 3/214 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  +PVTV+ + N +V   +T + +GY+A+QV  G  K   V+K
Sbjct: 8   GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVALQVTFGSRKASRVTK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121
           P  G  +   V   + + EFRV  +       G+       F+VGQ VDV G +IGKG++
Sbjct: 68  PEAGHLAKAGVEAGEIIREFRVTAETAGKYATGAAVPVADVFSVGQKVDVQGTSIGKGYA 127

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHN    RA+HG S SH   GS G  QDPGRVF  K+M G +G    T +NL+V+ 
Sbjct: 128 GTIKRHNMASQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDATTTTQNLDVIR 187

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           VD+ R L+L+KG +PG+ K  ++ VR + K+  +
Sbjct: 188 VDEARQLLLIKGAIPGS-KGGFVTVRPAVKAKAS 220


>gi|320160414|ref|YP_004173638.1| 50S ribosomal protein L3 [Anaerolinea thermophila UNI-1]
 gi|319994267|dbj|BAJ63038.1| 50S ribosomal protein L3 [Anaerolinea thermophila UNI-1]
          Length = 209

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 86/211 (40%), Positives = 123/211 (58%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT +++  G  IPVTV+    C V   RT + +GY AVQ+G  E K K 
Sbjct: 1   MLKGLIGKKIGMTQIFDENGVAIPVTVIEAGPCYVTQVRTPENDGYSAVQLGFEEVKPKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++    G     N+ P + L EFRV+  +  +  G   +   F VG+ VDV G + GKGF
Sbjct: 61  LTGGELGHLKRNNLPPLRFLREFRVKNPE--VKEGDKVTVECFAVGERVDVVGTSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR++F G   THG S  HR+ GS      PGRV+K  +  G MG +RVT + L+VV
Sbjct: 119 QGGVKRYHFRGGPKTHGQSDRHRAPGSRSSGTTPGRVYKGSRGPGHMGNDRVTAQGLKVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R LI VKG VPGA K   ++++++ K
Sbjct: 179 LVDTERNLIGVKGSVPGA-KGGLVVIKEARK 208


>gi|299065415|emb|CBJ36584.1| 50S ribosomal subunit protein L3 [Ralstonia solanacearum CMR15]
          Length = 209

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 86/202 (42%), Positives = 120/202 (59%), Gaps = 2/202 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V+  +G  IPVTVL +   +V   +T + +GY AVQV  G  +   V+KP+ G  + 
Sbjct: 1   MTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGTRRASRVTKPLAGHLAK 60

Query: 72  VNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
             V   + + EFR+       L +G       F+VGQ +DV G TIGKG++G +KR++F 
Sbjct: 61  AGVEAGEIIVEFRIDATKAAELKLGDTIDVDLFSVGQKIDVQGTTIGKGYAGTIKRYHFS 120

Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
             RA+HG S SH   GS G  QDPGRVF  K+M G MG    TV+NL +V VD +R L+ 
Sbjct: 121 SGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVIVRVDAERKLLF 180

Query: 191 VKGCVPGAKKNSWILVRDSFKS 212
           VKG VPGA K+ +++V  + K+
Sbjct: 181 VKGAVPGA-KSGFVVVSPAVKA 201


>gi|170077685|ref|YP_001734323.1| 50S ribosomal protein L3 [Synechococcus sp. PCC 7002]
 gi|226730579|sp|B1XJT9|RL3_SYNP2 RecName: Full=50S ribosomal protein L3
 gi|169885354|gb|ACA99067.1| ribosomal protein L3 [Synechococcus sp. PCC 7002]
          Length = 213

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 88/204 (43%), Positives = 126/204 (61%), Gaps = 3/204 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT +++   G  IPVTV+    C V   +T + +GY +VQ+G G+ K K
Sbjct: 1   MSLGILGTKLGMTQIFDNETGTAIPVTVVQAGPCTVTQIKTSETDGYTSVQIGYGDVKEK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           N++KP  G     + +P + L E+R+  D     +G   + + F  GQ+VDV+G TIG+G
Sbjct: 61  NLTKPQLGHLKKADAAPLRHLKEYRLD-DVSGYELGQAITANIFEAGQVVDVSGNTIGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G  KRHNF     THG S +HR  GSTG    PGRV+  K+MAGR GG ++TV+ LEV
Sbjct: 120 FAGYQKRHNFKRGNMTHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGRYGGTKITVRKLEV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSW 203
           V VD+++ L+L+KG +PG   N  
Sbjct: 179 VRVDEEKNLLLIKGAIPGKAGNLL 202


>gi|168334352|ref|ZP_02692539.1| 50S ribosomal protein L3 [Epulopiscium sp. 'N.t. morphotype B']
          Length = 211

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 90/211 (42%), Positives = 122/211 (57%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++A+K+GMT +++     IPVTVL    C VV  +T + +GY A+QVG    K K 
Sbjct: 1   MKKAIMAKKIGMTQIFDENANLIPVTVLEAGPCTVVQKKTKENDGYEAIQVGFINKKEKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V KP  G F    V PKK L EFR   D     VG       F  G  VDV G+T GKG+
Sbjct: 61  VIKPEAGHFEKAGVEPKKYLKEFRFD-DCSAFEVGGEIKAEVFVKGDKVDVAGVTKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           + ++K++ +      HG S  HR  GS G   +PGRV K K +  RMGG+ VT++NLE+V
Sbjct: 120 TSSIKKYGYSRGPMAHG-SKYHRHAGSMGAATNPGRVMKGKGLPSRMGGDNVTIQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD  + LIL+KGCVPG  K + + V++S K
Sbjct: 179 RVDADKNLILIKGCVPGP-KGTVVTVKNSVK 208


>gi|145517081|ref|XP_001444429.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124411840|emb|CAK77032.1| unnamed protein product [Paramecium tetraurelia]
          Length = 409

 Score =  250 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 96/216 (44%), Positives = 136/216 (62%), Gaps = 4/216 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K+GMT  ++  G R  +TVL LDN QVV    +  + Y  +Q+GAG   +K +
Sbjct: 150 RAGLIAVKVGMTAQWDKWGYRHALTVLQLDNNQVVQV--VKNDTYTGLQIGAGRVNIKTL 207

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP  G F   N+ PKK + EF +  + + LPVG + +  +FT GQ +D+ G++ GKGF 
Sbjct: 208 KKPQIGHFLKANIPPKKYIKEFPITPE-NTLPVGFMLTARHFTPGQYIDIQGISTGKGFG 266

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNF    ATHG S+ HR  GSTG RQDPGRVFK KKM G +G ++VT + +++  
Sbjct: 267 GTVKRHNFKTQPATHGNSLCHRQLGSTGQRQDPGRVFKGKKMPGHLGNDKVTCEGIQIYR 326

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           +D  R LI +KG VPG    S + +RDS+K+    K
Sbjct: 327 IDAVRQLIYIKGSVPGKP-GSIVYLRDSWKAQKKNK 361


>gi|302523993|ref|ZP_07276335.1| 50S ribosomal protein L3 [Streptomyces sp. AA4]
 gi|302432888|gb|EFL04704.1| 50S ribosomal protein L3 [Streptomyces sp. AA4]
          Length = 216

 Score =  250 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 91/211 (43%), Positives = 120/211 (56%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++ + R +PVTV+      V   RT DK+GY AVQ+  G    + V+
Sbjct: 7   KGILGTKLGMTQVFDEQNRVVPVTVVKAGPNVVTQVRTTDKDGYAAVQLAFGAVDPRKVN 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P++ L E R   D +   VG   +   F  G  VDVTG + GKG++G
Sbjct: 67  KPRTGHFDKAGVTPRRHLAELRTT-DAETYEVGQEITAEVFEAGTTVDVTGTSKGKGYAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G  A+HG    HR  GS G    PGRVFK  +MAGRMG +RVT + L V +V
Sbjct: 126 VMKRHGFKGQGASHGAQAVHRKPGSIGGCATPGRVFKGLRMAGRMGSDRVTTQGLTVHAV 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             + GL+L+KG VPG  K   + VR + K  
Sbjct: 186 RAEDGLLLIKGAVPGP-KGGLLFVRSAAKGG 215


>gi|115400825|ref|XP_001216001.1| 60S ribosomal protein L9, mitochondrial precursor [Aspergillus
           terreus NIH2624]
 gi|114191667|gb|EAU33367.1| 60S ribosomal protein L9, mitochondrial precursor [Aspergillus
           terreus NIH2624]
          Length = 335

 Score =  250 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 108/215 (50%), Positives = 140/215 (65%), Gaps = 3/215 (1%)

Query: 1   MRSGVVARKLGMTCVYNI-EGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G VA K GMT VY+   GRRI  TVL LD  QVV H+T  ++GY AVQVGAG     
Sbjct: 113 LRTGAVAIKKGMTGVYDAATGRRIACTVLQLDRVQVVAHKTRPQHGYYAVQVGAGWKHPS 172

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV+K + G FS+  VSPK+ +FEFRV+ +  LLPVG     S+F  GQ VD    T GKG
Sbjct: 173 NVTKSLLGHFSAHGVSPKRHVFEFRVRDEAGLLPVGRDIPASWFREGQFVDARSTTKGKG 232

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKRH FGG   +HGVS++HRS GS G  Q  G RV+  KKMAG MG  + TV+NL+
Sbjct: 233 FAGVMKRHGFGGQDRSHGVSLTHRSMGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLK 292

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V+ VD + G+++V+G V G  K   + ++D+ K  
Sbjct: 293 VLKVDPENGIVVVQGAVSGP-KGCVVRIQDAIKKP 326


>gi|313112880|ref|ZP_07798526.1| 50S ribosomal protein L3 [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310624785|gb|EFQ08094.1| 50S ribosomal protein L3 [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 210

 Score =  250 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 126/212 (59%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT +++  G+ +PVTV+    C VV  +T++ +GY AVQ+G GE   K 
Sbjct: 1   MVKGIIGKKVGMTQLFDANGKVVPVTVIEAGPCTVVQKKTVESDGYQAVQLGFGEVSAKK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F   NV+PKK L EFR+ +D   + VG V     F  G  VDV G++ GKG+
Sbjct: 61  VNKAAAGHFKKANVAPKKTLREFRL-EDVSAMNVGDVLKADVFAEGDKVDVVGVSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR+    LR +HG     R  GS G    P RVF  K++ G MG  RVTV+NL VV
Sbjct: 120 QGVIKRYGQHRLRESHGTGPVARHAGSNGSTSTPARVFPGKRLPGHMGFVRVTVQNLTVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  LI VKG VPG+ K + I + +S K+
Sbjct: 180 KVDTENNLIAVKGAVPGS-KGTIITLANSVKA 210


>gi|226309808|ref|YP_002769702.1| 50S ribosomal protein L3 [Brevibacillus brevis NBRC 100599]
 gi|254803658|sp|C0ZII0|RL3_BREBN RecName: Full=50S ribosomal protein L3
 gi|226092756|dbj|BAH41198.1| 50S ribosomal protein L3 [Brevibacillus brevis NBRC 100599]
          Length = 209

 Score =  250 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 86/212 (40%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT V+   G    VTV+ + +  V+  + ++ +GY A+Q+G  + K + 
Sbjct: 1   MTKGILGKKLGMTQVFGPNGTATAVTVIEVGSNVVLQKKDVETDGYEAIQIGFEDKKEQR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + E R     D   VG       F  G++VDV G++ GKGF
Sbjct: 61  ANKPEKGHAAKANTAPKRFIREIRGVNLAD-YEVGQELKADIFAEGEMVDVAGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRHN       HG S  HR  GS G    P RVFK + + G+MGG+ VT++NLEV+
Sbjct: 120 QGAIKRHNQSRGPMAHG-SRYHRGPGSMGAVA-PNRVFKGQTLPGQMGGDNVTIQNLEVI 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+LVKG VPG  KNS +LV  + K 
Sbjct: 178 KVDTERNLVLVKGSVPGP-KNSCVLVSTAVKK 208


>gi|296113797|ref|YP_003627735.1| 50S ribosomal protein L3 [Moraxella catarrhalis RH4]
 gi|295921491|gb|ADG61842.1| 50S ribosomal protein L3 [Moraxella catarrhalis RH4]
 gi|326562142|gb|EGE12470.1| 50S ribosomal protein L3 [Moraxella catarrhalis 7169]
 gi|326564493|gb|EGE14719.1| 50S ribosomal protein L3 [Moraxella catarrhalis 46P47B1]
 gi|326565676|gb|EGE15839.1| 50S ribosomal protein L3 [Moraxella catarrhalis 12P80B1]
 gi|326566245|gb|EGE16397.1| 50S ribosomal protein L3 [Moraxella catarrhalis 103P14B1]
 gi|326567103|gb|EGE17225.1| 50S ribosomal protein L3 [Moraxella catarrhalis BC1]
 gi|326568367|gb|EGE18447.1| 50S ribosomal protein L3 [Moraxella catarrhalis BC7]
 gi|326572268|gb|EGE22263.1| 50S ribosomal protein L3 [Moraxella catarrhalis BC8]
 gi|326574610|gb|EGE24550.1| 50S ribosomal protein L3 [Moraxella catarrhalis O35E]
 gi|326574866|gb|EGE24796.1| 50S ribosomal protein L3 [Moraxella catarrhalis 101P30B1]
 gi|326576190|gb|EGE26105.1| 50S ribosomal protein L3 [Moraxella catarrhalis CO72]
          Length = 212

 Score =  250 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 98/213 (46%), Positives = 137/213 (64%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V +K GMT V+   G  IPVTV+ +D  ++   +T+D +GY A+Q+  GE +   
Sbjct: 1   MAIGLVGKKCGMTRVFTEAGVSIPVTVVEVDANRISQIKTVDTDGYNAIQITTGERRDSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + ++EFR ++ D +   +G       F VGQLVDVTG + GKG
Sbjct: 61  VTAAQKGHFAKAGVAAGRGVWEFRAEESDLEGREIGGNILADIFEVGQLVDVTGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KRHNF    ATHG S+SHR  GSTG  Q PGRVFK KKM G+MG  RVTV+ LE+
Sbjct: 121 FQGGVKRHNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMPGQMGNKRVTVQGLEI 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VSVD ++G++++KG VPGA     ++VR S K+
Sbjct: 181 VSVDAEKGVLVIKGAVPGANGGD-VIVRPSVKA 212


>gi|184155991|ref|YP_001844331.1| 50S ribosomal protein L3 [Lactobacillus fermentum IFO 3956]
 gi|227515487|ref|ZP_03945536.1| ribosomal protein L3 [Lactobacillus fermentum ATCC 14931]
 gi|260662752|ref|ZP_05863646.1| 50S ribosomal protein L3 [Lactobacillus fermentum 28-3-CHN]
 gi|212288403|sp|B2GDW9|RL3_LACF3 RecName: Full=50S ribosomal protein L3
 gi|183227335|dbj|BAG27851.1| 50S ribosomal protein L3 [Lactobacillus fermentum IFO 3956]
 gi|227086100|gb|EEI21412.1| ribosomal protein L3 [Lactobacillus fermentum ATCC 14931]
 gi|260552833|gb|EEX25832.1| 50S ribosomal protein L3 [Lactobacillus fermentum 28-3-CHN]
          Length = 220

 Score =  250 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 78/212 (36%), Positives = 120/212 (56%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+   G  +PVTV+ +    V+  +TL+ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQVKTLENDGYSAVQLGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + E R  +  D + VG   +   F  G+ VDVTG T G G+
Sbjct: 61  SNKPEQGHAAKANTTPKRFIGEIRDAELGDDIKVGDKVAADIFAEGETVDVTGTTKGHGY 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G + +         HG S  HR  GS G       VFK KK+ GRMG N  TV++L +V
Sbjct: 121 QGNIHKDGQRRGPMAHG-SRYHRRPGSLGAI--INHVFKGKKLPGRMGNNTRTVQHLRIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  ++L+KG VPGA K S++ +++S K+
Sbjct: 178 KVDTENNVLLIKGNVPGANK-SFVTIKNSVKA 208


>gi|300309456|ref|YP_003773548.1| 50S ribosomal protein L3 [Herbaspirillum seropedicae SmR1]
 gi|300072241|gb|ADJ61640.1| 50S ribosomal subunit L3 protein [Herbaspirillum seropedicae SmR1]
          Length = 222

 Score =  250 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 96/216 (44%), Positives = 125/216 (57%), Gaps = 2/216 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GM  ++  +G  IPVTVL + N +V   +T + +GY AVQV  G+ +   
Sbjct: 5   MSLGLVGRKVGMMRIFTEDGDSIPVTVLDVSNNRVTQIKTPEVDGYSAVQVTFGQRRASR 64

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V K   G F+   V     L EFRV       L  G V     F  GQ VDV G++IGKG
Sbjct: 65  VVKAAAGHFAKAGVEAGTVLKEFRVDASKAAELKAGDVVGIGMFEAGQKVDVQGVSIGKG 124

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           ++G +KR+NF   RATHG S SH   GS G  QDPGRVF  K+M G +G  + TV+NLE+
Sbjct: 125 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVKTTVQNLEI 184

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             VD +R L+LVKG VPGA KN  ++V  + K    
Sbjct: 185 ARVDAERQLLLVKGAVPGA-KNGQVIVSPAVKVKAK 219


>gi|91205877|ref|YP_538232.1| 50S ribosomal protein L3 [Rickettsia bellii RML369-C]
 gi|157826764|ref|YP_001495828.1| 50S ribosomal protein L3 [Rickettsia bellii OSU 85-389]
 gi|109893551|sp|Q1RHM1|RL3_RICBR RecName: Full=50S ribosomal protein L3
 gi|166234585|sp|A8GVB4|RL3_RICB8 RecName: Full=50S ribosomal protein L3
 gi|91069421|gb|ABE05143.1| 50S ribosomal protein L3 [Rickettsia bellii RML369-C]
 gi|157802068|gb|ABV78791.1| 50S ribosomal protein L3 [Rickettsia bellii OSU 85-389]
          Length = 215

 Score =  250 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 109/212 (51%), Positives = 163/212 (76%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+K+GMT V+N  G+R+P+T++ +D+CQVV H+  +K+GY A+ +G  + K+  
Sbjct: 1   MRTGIIAQKVGMTSVFNNNGKRVPLTLVKVDDCQVVGHKIAEKHGYNALVIGIKDKKISR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+  F++  VSPK KL EFR+ +D + + + +     +FT GQ +DVT  TIGKGF
Sbjct: 61  VTKPMKQVFANAKVSPKTKLKEFRISED-NFIDIAASLEVDHFTAGQFIDVTATTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG ++VT++NL++ 
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCSQVTIQNLKIF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           ++D ++GLI+++G +PG  K S+I ++D+ K 
Sbjct: 180 AIDKEQGLIMIQGSIPG-HKGSYISIKDAIKK 210


>gi|322710687|gb|EFZ02261.1| 60S ribosomal protein L3 [Metarhizium anisopliae ARSEF 23]
          Length = 639

 Score =  250 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 101/217 (46%), Positives = 143/217 (65%), Gaps = 3/217 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+GV+A K GMT ++ +   RIP TVL LD  QVV ++T +K+GY AVQ+GAG  + +N
Sbjct: 382 LRAGVLATKKGMTSMF-VGKTRIPCTVLQLDQVQVVANKTREKHGYWAVQIGAGSRQPRN 440

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+ PM G++ +  ++PK +L EF V+  + LLPVGS   P +F  GQ+VDV   + G GF
Sbjct: 441 VTSPMLGYYEAKGIAPKSQLAEFTVRGREGLLPVGSQLLPDWFQTGQIVDVRAKSRGMGF 500

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179
           +G MKRH F G  A+HG S +HR+ G+TG  Q  G RV   KKM GRMG   VTV+NL+V
Sbjct: 501 AGGMKRHGFAGQEASHGNSKNHRTIGTTGPSQGSGSRVLPGKKMPGRMGNEWVTVQNLKV 560

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           + VD++ G++LV G VPG K  + + ++D+ K     
Sbjct: 561 MKVDNELGIVLVSGAVPGPKGRA-VKLQDAKKRKAPA 596


>gi|229587009|ref|YP_002845510.1| 50S ribosomal protein L3 [Rickettsia africae ESF-5]
 gi|259709733|sp|C3PPA7|RL3_RICAE RecName: Full=50S ribosomal protein L3
 gi|228022059|gb|ACP53767.1| 50S ribosomal protein L3 [Rickettsia africae ESF-5]
          Length = 215

 Score =  250 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 114/212 (53%), Positives = 164/212 (77%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ VG  + K+  
Sbjct: 1   MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVVGVKDKKISR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPMR  F++  +SPK KL EFR+ ++ + + + +     +FT GQ VD+T  TIGKGF
Sbjct: 61  VTKPMRQVFANAKISPKTKLKEFRISEE-NFIDIAASLEVDHFTAGQFVDITATTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ 
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +VD +R LI+++G +PG  KNS++ V+D+ K 
Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIKK 210


>gi|121608243|ref|YP_996050.1| 50S ribosomal protein L3 [Verminephrobacter eiseniae EF01-2]
 gi|166234606|sp|A1WHC5|RL3_VEREI RecName: Full=50S ribosomal protein L3
 gi|121552883|gb|ABM57032.1| LSU ribosomal protein L3P [Verminephrobacter eiseniae EF01-2]
          Length = 224

 Score =  250 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 85/211 (40%), Positives = 128/211 (60%), Gaps = 3/211 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  +PVTV+ + + +V   +T + +GY+A+QV  G  K   VSK
Sbjct: 8   GLLGRKVGMMRLFTDDGDAVPVTVVDVSDNRVTQVKTQENDGYVALQVTFGARKASRVSK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121
           P  G  +   V   + + EFRV  D       G+  +  S F+VGQ VDV G +IGKG++
Sbjct: 68  PEAGHLAKAGVQAGEIIQEFRVSADTAAQYQAGASVAITSVFSVGQKVDVQGTSIGKGYA 127

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHN    RA+HG S SH   GS G  QDPGRVF  K+M G +G    T +NL+++ 
Sbjct: 128 GTIKRHNMRSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDATRTTQNLDLIR 187

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +D+ R L+L+KG +PG+ K  ++ VR + +S
Sbjct: 188 IDEARQLLLIKGAIPGS-KGGFVTVRPAVRS 217


>gi|237739366|ref|ZP_04569847.1| LSU ribosomal protein L3P [Fusobacterium sp. 2_1_31]
 gi|229422974|gb|EEO38021.1| LSU ribosomal protein L3P [Fusobacterium sp. 2_1_31]
          Length = 211

 Score =  250 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 89/212 (41%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT ++  +G+ +PVTV+      V+  +T +K+GY+A+Q+G  E K KN +
Sbjct: 2   SGILGKKIGMTQIF-EDGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   V P++ + E  V+   +   +G             VD+TG + GKG SG
Sbjct: 61  KPLMGIFNKAGVKPQRFVRELAVES-VEGYELGQEIKVDVLAEVGYVDITGTSKGKGTSG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGG RA+HGVS +HR  GS G    PG+V K K+MAG+ G   VTV+NL+VV V
Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D +  L+L+KG VPGA KNS+++++ + K  +
Sbjct: 180 DVEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210


>gi|239817873|ref|YP_002946783.1| 50S ribosomal protein L3 [Variovorax paradoxus S110]
 gi|259709746|sp|C5CP53|RL3_VARPS RecName: Full=50S ribosomal protein L3
 gi|239804450|gb|ACS21517.1| ribosomal protein L3 [Variovorax paradoxus S110]
          Length = 226

 Score =  250 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 86/215 (40%), Positives = 128/215 (59%), Gaps = 3/215 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  +PVTV+ + N +V   ++ + +GY+A+QV  G  K   V+K
Sbjct: 8   GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQIKSQETDGYVALQVTFGSRKASRVTK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFS 121
           P  G  +   V   + + EFRV  D       G+V + S  F+VGQ VDV G +IGKG++
Sbjct: 68  PQAGHLAKAGVEAGEIIREFRVTADTAGQHKAGAVIAASSVFSVGQKVDVQGTSIGKGYA 127

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHN    RA+HG S SH   GS G  QDPGRVF  K+M G +G    T +NL+V  
Sbjct: 128 GTIKRHNMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTKTTQNLDVFR 187

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           +D+ R L+L+KG +PG+ K  ++ VR + K+    
Sbjct: 188 IDEARQLLLIKGAIPGS-KGGFVTVRPAIKAKPQA 221


>gi|157828860|ref|YP_001495102.1| 50S ribosomal protein L3 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933587|ref|YP_001650376.1| 50S ribosomal protein L3 [Rickettsia rickettsii str. Iowa]
 gi|238650972|ref|YP_002916828.1| 50S ribosomal protein L3 [Rickettsia peacockii str. Rustic]
 gi|166234587|sp|A8GT69|RL3_RICRS RecName: Full=50S ribosomal protein L3
 gi|189029476|sp|B0BUR0|RL3_RICRO RecName: Full=50S ribosomal protein L3
 gi|259709734|sp|C4K2H9|RL3_RICPU RecName: Full=50S ribosomal protein L3
 gi|157801341|gb|ABV76594.1| 50S ribosomal protein L3 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908674|gb|ABY72970.1| LSU ribosomal protein L3P [Rickettsia rickettsii str. Iowa]
 gi|238625070|gb|ACR47776.1| 50S ribosomal protein L3 [Rickettsia peacockii str. Rustic]
          Length = 215

 Score =  250 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 113/212 (53%), Positives = 164/212 (77%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G  + K+  
Sbjct: 1   MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPMR  F++  +SPK KL EFR+ ++ + + + +     +FT GQ VD+T  TIGKGF
Sbjct: 61  VTKPMRQVFANAKISPKTKLKEFRISEE-NFIDIAASLEVDHFTAGQFVDITATTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ 
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +VD +R LI+++G +PG  KNS++ V+D+ K 
Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIKK 210


>gi|157804035|ref|YP_001492584.1| 50S ribosomal protein L3 [Rickettsia canadensis str. McKiel]
 gi|166234586|sp|A8EZL6|RL3_RICCK RecName: Full=50S ribosomal protein L3
 gi|157785298|gb|ABV73799.1| 50S ribosomal protein L3 [Rickettsia canadensis str. McKiel]
          Length = 215

 Score =  250 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 111/212 (52%), Positives = 163/212 (76%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G  + K+  
Sbjct: 1   MRTGIIAQKIGMTSVFNDKGERIALTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+  F++  +SPK KL EFR+ ++ + + V +     +F  GQ VD+T +TIGKGF
Sbjct: 61  VTKPMKQVFANAKISPKTKLKEFRISEE-NFIDVAASLEVDHFMAGQFVDITAITIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ 
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +VD  R LI+++G +PG  KNS++ ++D+ K 
Sbjct: 180 AVDKDRKLIMIQGSIPG-HKNSYLSIKDAIKK 210


>gi|313888808|ref|ZP_07822469.1| 50S ribosomal protein L3 [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845177|gb|EFR32577.1| 50S ribosomal protein L3 [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 210

 Score =  249 bits (637), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 87/207 (42%), Positives = 127/207 (61%), Gaps = 3/207 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           +V +K+GMT +++ EG   PV+V+ ++   VV  +T++ +GY A+QV   E K + ++KP
Sbjct: 4   LVGKKIGMTQIFDEEGIVTPVSVIEVEPNVVVQKKTIESDGYNAIQVATQEVKERRLNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
            +G      V  +K L EFR   D +   +G       F VG+ VDV G + GKG +G +
Sbjct: 64  EKGHLDKAGVGYRKHLSEFRTD-DVESYNLGDEIKVDLFEVGEHVDVVGTSKGKGTAGII 122

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHNFG  R THG S  HR  G  G    PG+V+KN +MAG+MG  RVTV+NLE+V +D 
Sbjct: 123 KRHNFGRGRETHG-SKFHRMPGGMGAASYPGKVWKNHRMAGKMGNERVTVQNLEIVRIDT 181

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
            + LILVKG +PG KK + + ++ + K
Sbjct: 182 DKNLILVKGAIPGPKKGT-VRIKSTVK 207


>gi|241765217|ref|ZP_04763200.1| ribosomal protein L3 [Acidovorax delafieldii 2AN]
 gi|241365097|gb|EER59976.1| ribosomal protein L3 [Acidovorax delafieldii 2AN]
          Length = 224

 Score =  249 bits (637), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 84/214 (39%), Positives = 126/214 (58%), Gaps = 3/214 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  +PVTV+ + N +V   +T + +GY+A+QV  G  K   V+K
Sbjct: 8   GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVALQVTFGSRKASRVTK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121
           P  G  +   V   + + EFRV  +       G+       F VGQ VDV G +IGKG++
Sbjct: 68  PEAGHLAKAGVEAGEIIQEFRVTAETAGKYAAGAAVPVADVFAVGQKVDVQGTSIGKGYA 127

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHN    RA+HG S SH   GS G  QDPGRVF  K+M G +G    T +NL+V+ 
Sbjct: 128 GTIKRHNMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTKTTQNLDVIR 187

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           +D+ R L+L+KG +PG+ K  ++ VR + K+  +
Sbjct: 188 IDEARQLLLIKGAIPGS-KGGFVTVRPAVKAKAS 220


>gi|86605866|ref|YP_474629.1| 50S ribosomal protein L3 [Synechococcus sp. JA-3-3Ab]
 gi|109893563|sp|Q2JV81|RL3_SYNJA RecName: Full=50S ribosomal protein L3
 gi|86554408|gb|ABC99366.1| ribosomal protein L3 [Synechococcus sp. JA-3-3Ab]
          Length = 214

 Score =  249 bits (637), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 85/211 (40%), Positives = 124/211 (58%), Gaps = 4/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT +++ EG  IPVTV+    C V   +T   +GY AVQ+G      K+
Sbjct: 1   MALGILGRKVGMTQIFSPEGLAIPVTVVQAGPCTVTQIKTQATDGYNAVQLGYWPTAEKH 60

Query: 61  VSKPMRGFFSSVNV-SPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +++  RG  S   V    + L EFRV    +   +G   +   F+ GQL+DV G +IG+G
Sbjct: 61  LTRAQRGHLSKAGVTELLRHLREFRVD-QPEAYQLGQKITVEIFSPGQLLDVAGTSIGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G  KRH+FG    +HG S +HR  GS G    PGRVF   +MAGRMGG RVT++ L++
Sbjct: 120 FAGYQKRHHFGRGPMSHG-SKNHRRPGSVGAGTTPGRVFPGLRMAGRMGGCRVTIRKLQL 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           V VD +R L+++KG VPG +    + +  + 
Sbjct: 179 VQVDPERNLLIIKGSVPGVE-GGLLEITPAK 208


>gi|322418364|ref|YP_004197587.1| 50S ribosomal protein L3 [Geobacter sp. M18]
 gi|320124751|gb|ADW12311.1| 50S ribosomal protein L3 [Geobacter sp. M18]
          Length = 211

 Score =  249 bits (637), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 88/212 (41%), Positives = 124/212 (58%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT ++  +GRRI VTV+    C V+  ++++K+GY A+QVG  +     
Sbjct: 1   MNKGLIGKKLGMTQIFAEDGRRIAVTVVEAGPCVVLQKKSVEKDGYTAIQVGYVQKDAAR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +    G   S          E R+   D    +G V     F  G LVDVTG +IGKGF
Sbjct: 61  ANAAQVGHCKSAGAGVFTHYRELRMDNTDA-YNLGDVIEAGVFAEGDLVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR  F G R++HG S  HR+ GS GC   P RVFKNKKM G++G  +VTV+ L+VV
Sbjct: 120 AGVIKRWGFKGGRSSHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQLGNEKVTVQRLKVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD    LIL+ G +PG+  N  +L++DS K+
Sbjct: 179 RVDAADNLILLGGAIPGSA-NGVVLIKDSVKA 209


>gi|261854950|ref|YP_003262233.1| 50S ribosomal protein L3 [Halothiobacillus neapolitanus c2]
 gi|261835419|gb|ACX95186.1| 50S ribosomal protein L3 [Halothiobacillus neapolitanus c2]
          Length = 214

 Score =  249 bits (637), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 93/212 (43%), Positives = 125/212 (58%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GVV RK+GMT V++  G   PVTV+ ++  +V   +T + +GY AVQV  G  +   
Sbjct: 1   MSLGVVGRKVGMTRVFDDAGVSTPVTVIEVEPNRVTQLKTPEVDGYTAVQVTTGTRRASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K M G ++    +  +   EFR+  D+      G+  + S F   + VDV G + GKG
Sbjct: 61  VTKAMAGHYAKAETASGRMSTEFRISADELAGFQPGAEITVSIFDGVEKVDVAGQSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KR+NF    ATHG S SHR  GS G  Q PGRVF  KKM+G MG  RV+   L+V
Sbjct: 121 FAGTVKRYNFRTQDATHGNSRSHRVPGSIGQNQTPGRVFPGKKMSGHMGDERVSSLGLKV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +RGLILVKG VPG+     ++VR S K
Sbjct: 181 VRVDVERGLILVKGAVPGSTGGD-VIVRPSVK 211


>gi|262066304|ref|ZP_06025916.1| 50S ribosomal protein L3 [Fusobacterium periodonticum ATCC 33693]
 gi|294783642|ref|ZP_06748966.1| 50S ribosomal protein L3 [Fusobacterium sp. 1_1_41FAA]
 gi|291379999|gb|EFE87517.1| 50S ribosomal protein L3 [Fusobacterium periodonticum ATCC 33693]
 gi|294480520|gb|EFG28297.1| 50S ribosomal protein L3 [Fusobacterium sp. 1_1_41FAA]
          Length = 211

 Score =  249 bits (637), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 89/212 (41%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT ++  +G+ +PVTV+      V+  +T +K+GY+A+Q+G  E K KN +
Sbjct: 2   SGILGKKIGMTQIF-EDGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   V P++ + E  V +  +   +G             VD+TG + GKG SG
Sbjct: 61  KPLMGIFNKAGVKPQRFVRELAV-ETVEGYELGQEIKVDVLAEVGYVDITGTSKGKGTSG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGG RA+HGVS +HR  GS G    PG+V K K+MAG+ G   VTV+NL+VV V
Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D +  L+L+KG VPGA KNS+++++ + K  +
Sbjct: 180 DVEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210


>gi|288925715|ref|ZP_06419647.1| 50S ribosomal protein L3 [Prevotella buccae D17]
 gi|315606504|ref|ZP_07881519.1| 50S ribosomal protein L3 [Prevotella buccae ATCC 33574]
 gi|288337653|gb|EFC76007.1| 50S ribosomal protein L3 [Prevotella buccae D17]
 gi|315251910|gb|EFU31884.1| 50S ribosomal protein L3 [Prevotella buccae ATCC 33574]
          Length = 204

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 85/205 (41%), Positives = 127/205 (61%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G GEAK K  SK
Sbjct: 3   GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F     +PKK L EF+  ++     +G   +   F   + VDV G++ GKGF G 
Sbjct: 63  PQLGHFKKAGTTPKKHLAEFKFDEE---YNLGDTINVELFNDTKFVDVVGISKGKGFQGV 119

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           MKRH FGG  ++THG     R  GS G    P +VFK  +MAG+MGG+RVT +NL+V+ V
Sbjct: 120 MKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLQVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             ++ L++VKG + G K ++ ++ +
Sbjct: 180 IPEQNLLIVKGSIAGCKGSTVLIEK 204


>gi|213962845|ref|ZP_03391105.1| 50S ribosomal protein L3 [Capnocytophaga sputigena Capno]
 gi|213954502|gb|EEB65824.1| 50S ribosomal protein L3 [Capnocytophaga sputigena Capno]
          Length = 225

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 82/205 (40%), Positives = 127/205 (61%), Gaps = 4/205 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP T++    C V   RT + +GY A+Q+G  +   K  +
Sbjct: 22  SGLIGKKVGMTSIFDENGKNIPCTIIEAGPCVVTQVRTKEVDGYDALQLGFDDKAEKRAT 81

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F     S KKK+ EF+  +D+    +G   +  +FT G+ VD+TG++ GKGF G
Sbjct: 82  KAELGHFKKAGTSVKKKVVEFQGFEDN--YKLGDTITVDFFTEGEFVDITGVSKGKGFQG 139

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            ++RH FGG  + THG     R+ GS G    P RVFK  +MAGRMG  +VTV+NL+V+ 
Sbjct: 140 VVRRHGFGGVGQTTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVLK 199

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           V  ++ L++VKGC+PG  KN+++ +
Sbjct: 200 VVAEKNLLVVKGCIPG-HKNAYVTI 223


>gi|312870514|ref|ZP_07730633.1| 50S ribosomal protein L3 [Lactobacillus oris PB013-T2-3]
 gi|311093976|gb|EFQ52301.1| 50S ribosomal protein L3 [Lactobacillus oris PB013-T2-3]
          Length = 220

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 78/212 (36%), Positives = 121/212 (57%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+   G  +PVTV+ +    V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MAKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQIKTVENDGYNAVQLGFDDKREIL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + E R  +  D + VG       F  G+ VDVTG+T G G+
Sbjct: 61  SNKPEQGHAAKANTTPKRFIGEIRDAELGDDIKVGDEVKADVFAEGETVDVTGVTKGHGY 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G + + N       HG S  HR  GS G      RVFK  K+ GRMG   VT+++L+VV
Sbjct: 121 QGNIHKDNQSRGPMAHG-SRYHRRPGSLGAI--INRVFKGMKLPGRMGNKTVTMQHLQVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD    ++L+KG VPGA K S++ +++S K+
Sbjct: 178 KVDLDNNVLLIKGNVPGANK-SYVTIKNSVKA 208


>gi|284992874|ref|YP_003411428.1| 50S ribosomal protein L3 [Geodermatophilus obscurus DSM 43160]
 gi|284066119|gb|ADB77057.1| 50S ribosomal protein L3 [Geodermatophilus obscurus DSM 43160]
          Length = 221

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 93/210 (44%), Positives = 120/210 (57%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+    C V   RT + +GY AVQ+G GE   + V+K
Sbjct: 7   GLLGEKLGMTQVFDENNRIVPVTVVKAGPCVVTQVRTPEVDGYSAVQLGFGEIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V+P++ L E R  KD     VG   +   F     VDV G + GKG +G 
Sbjct: 67  PEGGHFTKAGVTPRRHLVELR-TKDASEYTVGQELTAEVFDGVAKVDVIGTSKGKGTAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GL A HG    HRS GS G    PGRVFK  +MAGRMG  + T  +L V  VD
Sbjct: 126 MKRHGFKGLGAAHGTQRKHRSPGSIGGASTPGRVFKGLRMAGRMGAVKTTTLSLTVHKVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +RGL+L+KG +PG  K   +LVR + K  
Sbjct: 186 AERGLLLIKGAIPGP-KGGLVLVRSAVKGG 214


>gi|321259123|ref|XP_003194282.1| ribosomal large subunit assembly and maintenance-related protein
           [Cryptococcus gattii WM276]
 gi|317460753|gb|ADV22495.1| Ribosomal large subunit assembly and maintenance-related protein,
           putative [Cryptococcus gattii WM276]
          Length = 308

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 103/222 (46%), Positives = 139/222 (62%), Gaps = 4/222 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVK 59
           +R+G++ARK GMT +++ +GRR PVTVL +D  QVV H      + Y  +Q+GA   + K
Sbjct: 43  LRTGLIARKRGMTALWDADGRRWPVTVLQVDANQVVRHSPPPPTSPYHTLQIGASPRREK 102

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             +K   G F    V PK +L EF+V  D  ++PVG+  S  +F  GQ VDV G+TIGKG
Sbjct: 103 TTTKQQLGHFRKAGVEPKYRLKEFQVSGD-AVVPVGTELSAGHFVPGQFVDVQGVTIGKG 161

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKRH F GL+A+HG S+ HRS GS G  QDPGRV   KKM G MG    T +NL +
Sbjct: 162 FQGVMKRHGFRGLKASHGTSVKHRSGGSIGQNQDPGRVIPGKKMPGHMGNATRTTQNLLI 221

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
             VD    L+ V+GCVPG+  +S++ V+DS K  V  K +++
Sbjct: 222 HRVDHILNLLYVRGCVPGSD-DSFLYVKDS-KKLVKSKAQLA 261


>gi|238922830|ref|YP_002936343.1| 50S ribosomal protein L3 [Eubacterium rectale ATCC 33656]
 gi|259646545|sp|C4ZBD4|RL3_EUBR3 RecName: Full=50S ribosomal protein L3
 gi|238874502|gb|ACR74209.1| 50S ribosomal protein L3 [Eubacterium rectale ATCC 33656]
 gi|291523732|emb|CBK89319.1| LSU ribosomal protein L3P [Eubacterium rectale DSM 17629]
 gi|291528802|emb|CBK94388.1| LSU ribosomal protein L3P [Eubacterium rectale M104/1]
          Length = 227

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 89/229 (38%), Positives = 122/229 (53%), Gaps = 19/229 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58
           M+  ++A K+GMT ++N +G  +PVTVL    C V   +T++ +GY AVQVG G+ K   
Sbjct: 1   MKKAILATKIGMTQIFNADGVLVPVTVLEAGPCVVTQIKTVENDGYSAVQVGFGDKKEKV 60

Query: 59  --------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
                           V+K   G F    VS K+ + EF+ +  D+   +        F 
Sbjct: 61  VEKDANGKKSVAHRHGVNKAQMGHFKKAGVSGKRFVREFKFENADE-YNLADEIKADIFA 119

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G  VDVT ++ GKGF GA+KR         HG S  HR  GS G    P +VFK K M 
Sbjct: 120 EGDKVDVTAISKGKGFQGAIKRLGQHRGPMAHG-SKFHRHQGSNGACSSPSKVFKGKGMP 178

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           G MG  +VT +NLEVV VD  + L+L+KG VPGAKK + I V+++ KS 
Sbjct: 179 GHMGSVKVTTQNLEVVRVDADKNLLLIKGAVPGAKK-ALITVKETTKSG 226


>gi|15892929|ref|NP_360643.1| 50S ribosomal protein L3 [Rickettsia conorii str. Malish 7]
 gi|42559674|sp|Q92GW6|RL3_RICCN RecName: Full=50S ribosomal protein L3
 gi|15620121|gb|AAL03544.1| 50S ribosomal protein L3 [Rickettsia conorii str. Malish 7]
          Length = 215

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 113/212 (53%), Positives = 164/212 (77%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G  + K+  
Sbjct: 1   MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPMR  F++  +SPK KL EFR+ ++ + + + +     +FT GQ VD+T  TIGKGF
Sbjct: 61  VTKPMRQVFANAKISPKTKLKEFRISEE-NFIDIAASLEVDHFTAGQFVDITATTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ 
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNKVTIQNLKIF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +VD +R LI+++G +PG  KNS++ V+D+ K 
Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIKK 210


>gi|162446957|ref|YP_001620089.1| 50S ribosomal protein L3 [Acholeplasma laidlawii PG-8A]
 gi|189042828|sp|A9NED3|RL3_ACHLI RecName: Full=50S ribosomal protein L3
 gi|161985064|gb|ABX80713.1| large subunit ribosomal protein L3 [Acholeplasma laidlawii PG-8A]
          Length = 212

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 83/216 (38%), Positives = 123/216 (56%), Gaps = 8/216 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT +++  G  IPVTV+ ++   V+  +T++ +GY A QVG    + K 
Sbjct: 1   MAKGILGRKIGMTQIFDENGVLIPVTVIDVEGNVVLQQKTVEVDGYQATQVGFESKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL---LPVGSVFSPSYFTVGQLVDVTGMTIG 117
            +KP  G     N +PK+ + E R    ++    L VG+      FT G+ VDVTG + G
Sbjct: 61  SNKPELGHVKKANTAPKRFVKEIRFDALNNELLALEVGTEIKADLFTAGEDVDVTGTSKG 120

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF G +KRHN      THG S  HR  GS G  +      K K + G+MG  +VTV+NL
Sbjct: 121 KGFQGNIKRHNQSRGPMTHG-SRYHRGVGSLGAIKGN---MKGKNLPGQMGNEQVTVQNL 176

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           ++V+VD +  L+LV G VPG +K  +++VR + K  
Sbjct: 177 KIVAVDTENDLLLVSGSVPGPRKG-YVVVRSAIKKG 211


>gi|332042720|gb|EGI78920.1| 50S ribosomal protein L3 [Lacinutrix algicola 5H-3-7-4]
          Length = 205

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 85/206 (41%), Positives = 127/206 (61%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C V   RT + +GY AVQ+G  +A  K+ +
Sbjct: 2   SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCIVTQVRTEEVDGYKAVQLGFDDATEKSAT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G       S K+K+ EF+  +  +   +G   +  +F  G+ VDV+G + GKGF G
Sbjct: 62  KADLGHAKKAGTSVKRKIAEFQGFE--EEYKLGDAITVEHFAEGEFVDVSGTSKGKGFQG 119

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG  +ATHG     R+ GS G    P RVFK  KMAGRMGG+ + V+NL V+ 
Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGRMGGDTIKVQNLRVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L++VKGCVPG  KN+++++R
Sbjct: 180 VVTEKNLLVVKGCVPG-HKNAYVIIR 204


>gi|259502531|ref|ZP_05745433.1| 50S ribosomal protein L3 [Lactobacillus antri DSM 16041]
 gi|259169483|gb|EEW53978.1| 50S ribosomal protein L3 [Lactobacillus antri DSM 16041]
          Length = 220

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 78/212 (36%), Positives = 121/212 (57%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+   G  +PVTV+ +    V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MAKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQVKTVENDGYNAVQLGFDDKREIL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + E R  +  D + VG       F  G+ VDVTG+T G G+
Sbjct: 61  SNKPEQGHAAKANTTPKRFIGEIRDAELGDDIKVGDEVKADVFAEGETVDVTGVTKGHGY 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G + + N       HG S  HR  GS G      RVFK  K+ GRMG   VT+++L+VV
Sbjct: 121 QGNIHKDNQSRGPMAHG-SRYHRRPGSLGAI--INRVFKGMKLPGRMGNKTVTMQHLQVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD    ++L+KG VPGA K S++ +++S K+
Sbjct: 178 KVDLDNNVLLIKGNVPGANK-SYVTIKNSVKA 208


>gi|17231707|ref|NP_488255.1| 50S ribosomal protein L3 [Nostoc sp. PCC 7120]
 gi|42559670|sp|Q8YPH9|RL3_ANASP RecName: Full=50S ribosomal protein L3
 gi|17133350|dbj|BAB75914.1| 50S ribosomal protein L3 [Nostoc sp. PCC 7120]
          Length = 211

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 84/211 (39%), Positives = 126/211 (59%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT +++  G  IPVTV+ +  C V   ++   +GY A+QVG GE K K 
Sbjct: 1   MSVGILGTKLGMTQIFDEAGVAIPVTVVQVGPCVVTQVKSKQTDGYAAIQVGYGEVKPKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P+ G  +  +    + L E+      D   +G       F+VG+LVDV G +IG+GF
Sbjct: 61  LNRPLLGHLAKSSAPALRHLKEYHTDGSSD-YALGQEIKADIFSVGELVDVIGTSIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KR+NFG    +HG S +HR+ GS G    PGRV+  K+MAGR+GG RVT++ L V+
Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGTRVTIRKLTVI 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L+L+KG VPG    + + +  + K
Sbjct: 179 RVDAERNLLLIKGAVPGKP-GALLSIVPAKK 208


>gi|331004121|ref|ZP_08327601.1| 50S ribosomal protein L3 [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330411531|gb|EGG90941.1| 50S ribosomal protein L3 [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 225

 Score =  249 bits (636), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 82/227 (36%), Positives = 119/227 (52%), Gaps = 18/227 (7%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ARK+GMT +++  G  IPVTVL    C V   +T + +GY +VQV  G+ + K 
Sbjct: 1   MKKAILARKVGMTQIFDENGVLIPVTVLLAGPCVVTQVKTEENDGYNSVQVAYGQIRTKL 60

Query: 61  VSKPMRGFFSSVNVS---------------PKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105
           V+K   G  +   +                  + + EF+ +   +  P  +      F  
Sbjct: 61  VNKAKAGHLAKAGIEKVVVENGDKKREIFTAGRFIREFKFENASEYAP-KAEIKADIFAA 119

Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
           G  +D T ++ GKGF GA+KRH       +HG S  HR  GS G   DP  VFK K M G
Sbjct: 120 GDKIDATAISKGKGFQGAIKRHGQSRGPMSHG-SKFHRHQGSNGSSSDPSHVFKGKGMPG 178

Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            MG  RVT +NLE+V VD  + LILVKG +PG+KK + I ++++ K 
Sbjct: 179 HMGAKRVTTQNLEIVRVDADKNLILVKGSMPGSKK-ALITLKETVKK 224


>gi|304384275|ref|ZP_07366686.1| 50S ribosomal protein L3 [Prevotella marshii DSM 16973]
 gi|304334591|gb|EFM00873.1| 50S ribosomal protein L3 [Prevotella marshii DSM 16973]
          Length = 204

 Score =  248 bits (635), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 88/205 (42%), Positives = 124/205 (60%), Gaps = 5/205 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V++ +G+ +P TV+    C V   +TL+K+GY AVQ+G  EAK    +K
Sbjct: 3   GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTLEKDGYKAVQLGFAEAKESRTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           PM G F     +PKK L EF+ +++     +G   +   F   + VDV G + GKGF G 
Sbjct: 63  PMLGIFKKAGTTPKKHLVEFKFEEE---YNLGDTITVELFNDTEFVDVVGTSKGKGFQGV 119

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  ++THG     R  GS G    P +VFK  +MAG+MGG+RVT +NL V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLRVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  LILVKG V G  K S +L++
Sbjct: 180 IPEHNLILVKGSVAGC-KGSTVLIK 203


>gi|150008984|ref|YP_001303727.1| 50S ribosomal protein L3 [Parabacteroides distasonis ATCC 8503]
 gi|255014815|ref|ZP_05286941.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_7]
 gi|256841015|ref|ZP_05546522.1| 50S ribosomal protein L3 [Parabacteroides sp. D13]
 gi|262383874|ref|ZP_06077010.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_33B]
 gi|298375783|ref|ZP_06985739.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_19]
 gi|301312033|ref|ZP_07217955.1| 50S ribosomal protein L3 [Bacteroides sp. 20_3]
 gi|166233171|sp|A6LEJ1|RL3_PARD8 RecName: Full=50S ribosomal protein L3
 gi|149937408|gb|ABR44105.1| ribosomal protein L3 [Parabacteroides distasonis ATCC 8503]
 gi|256736858|gb|EEU50185.1| 50S ribosomal protein L3 [Parabacteroides sp. D13]
 gi|262294772|gb|EEY82704.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_33B]
 gi|298266820|gb|EFI08477.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_19]
 gi|300830135|gb|EFK60783.1| 50S ribosomal protein L3 [Bacteroides sp. 20_3]
          Length = 205

 Score =  248 bits (635), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 85/204 (41%), Positives = 123/204 (60%), Gaps = 4/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EG+ +P TV+ +  C V   +TL+K+GY AVQ+G  E K K+ ++
Sbjct: 3   GLLGKKIGMTSVFSAEGKNLPCTVIEVGPCVVTQIKTLEKDGYEAVQLGFQEKKEKHTTQ 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ L EF+    +    +G V +  +      VDV G + GKGF G 
Sbjct: 63  PEMGHFKKAGVAPQRHLAEFK--NFETEYKLGDVITVDFLEDAGFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  + THG     R  GS G    P +VFK  +M G+MG  RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGNERVTVQNLQVIKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
             +  L+LVKG VPGA K S +L+
Sbjct: 181 MPEHNLLLVKGSVPGA-KGSILLI 203


>gi|302662377|ref|XP_003022845.1| hypothetical protein TRV_03069 [Trichophyton verrucosum HKI 0517]
 gi|291186810|gb|EFE42227.1| hypothetical protein TRV_03069 [Trichophyton verrucosum HKI 0517]
          Length = 304

 Score =  248 bits (635), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 101/215 (46%), Positives = 144/215 (66%), Gaps = 3/215 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GMT +Y+   G R P TVL LD  QV+ H+T +KNGY AVQVG+G    +
Sbjct: 77  LRTGALAIKKGMTAIYDPETGVRTPCTVLQLDGAQVISHKTFEKNGYCAVQVGSGLKSER 136

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV++PM G FS+  VSPK+ + EFRV+ +  LLP+G V +  +F  GQ VDV   + G G
Sbjct: 137 NVTRPMLGHFSANGVSPKRHIHEFRVKDETGLLPIGEVINADWFQEGQYVDVRSNSRGMG 196

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+GAMK+  F G   +HGVS++HRS GST   Q  G RV+  KKM GRMG ++VT+++L+
Sbjct: 197 FAGAMKKWGFHGQDRSHGVSLTHRSLGSTAPSQGGGSRVYPGKKMPGRMGNHQVTLQSLK 256

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V+ VD ++G+++VKG V G K    + ++D+ K  
Sbjct: 257 VLKVDAEKGIVVVKGGVAGPKGRC-VKIQDAIKKP 290


>gi|260655383|ref|ZP_05860871.1| 50S ribosomal protein L3 [Jonquetella anthropi E3_33 E1]
 gi|260629831|gb|EEX48025.1| 50S ribosomal protein L3 [Jonquetella anthropi E3_33 E1]
          Length = 207

 Score =  248 bits (635), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 104/204 (50%), Positives = 132/204 (64%), Gaps = 2/204 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GMT VY+ EGR IPVTV+    C VV  RT +KNGY AV +G  E K + VS
Sbjct: 2   IGILGQKVGMTRVYSEEGRAIPVTVIAAGPCPVVDLRTPEKNGYSAVLLGFSERKPQRVS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    V+P + L EFRV  D     +G   + S F  G+ VDVTG + GKG +G
Sbjct: 62  KPLAGTFKRAGVTPCRWLREFRV-ADSGKWEIGGTVNVSLFQAGEAVDVTGTSKGKGTAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR+ FGG  A+HGVS +HR   S+G    P RVFK K+M GRMG  RVTVKNL VV++
Sbjct: 121 VIKRYGFGGAPASHGVSKTHRKPNSSGASSYPSRVFKGKRMPGRMGNERVTVKNLTVVAI 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
           D +  L+LVKG VPGA KN  +LV
Sbjct: 181 DVENNLLLVKGAVPGA-KNGLVLV 203


>gi|145525954|ref|XP_001448788.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124416354|emb|CAK81391.1| unnamed protein product [Paramecium tetraurelia]
          Length = 409

 Score =  248 bits (635), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 97/216 (44%), Positives = 137/216 (63%), Gaps = 4/216 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K+GMT  ++  G R  +TVL LDN QVV    +  + Y  +QVGAG   +K +
Sbjct: 150 RAGLIAVKVGMTAQWDKWGYRHALTVLQLDNNQVVQV--VKNDTYTGLQVGAGAVNIKTL 207

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP  G F   N+ PKK + EF +  + ++LPVG + +  +FT GQ +D+ G++ GKGF 
Sbjct: 208 KKPQIGHFLKANIPPKKYIKEFPITPE-NVLPVGFMLTARHFTPGQYIDIQGISTGKGFG 266

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNF    ATHG S+ HR  GSTG RQDPGRVFK KKM G +G ++VT + +++  
Sbjct: 267 GTVKRHNFKTQPATHGNSLCHRQLGSTGQRQDPGRVFKGKKMPGHLGNDKVTCEAIQIYR 326

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           +D  R LI +KG VPG    S + +RDS+K+    K
Sbjct: 327 IDAVRQLIYIKGSVPGKP-GSIVYLRDSWKAQKKNK 361


>gi|34581369|ref|ZP_00142849.1| 50S ribosomal protein L3 [Rickettsia sibirica 246]
 gi|28262754|gb|EAA26258.1| 50S ribosomal protein L3 [Rickettsia sibirica 246]
          Length = 215

 Score =  248 bits (635), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 113/212 (53%), Positives = 163/212 (76%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G  + K+  
Sbjct: 1   MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPMR  F++  +SPK KL EFR+  + + + + +     +FT GQ VD+T  TIGKGF
Sbjct: 61  VTKPMRQVFANAKISPKTKLKEFRISAE-NFIDIAASLEVDHFTAGQFVDITATTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ 
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +VD +R LI+++G +PG  KNS++ V+D+ K 
Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIKK 210


>gi|190572944|ref|YP_001970789.1| 50S ribosomal protein L3 [Stenotrophomonas maltophilia K279a]
 gi|194364534|ref|YP_002027144.1| 50S ribosomal protein L3 [Stenotrophomonas maltophilia R551-3]
 gi|254522293|ref|ZP_05134348.1| ribosomal protein L3 [Stenotrophomonas sp. SKA14]
 gi|226730572|sp|B4SKW3|RL3_STRM5 RecName: Full=50S ribosomal protein L3
 gi|226730573|sp|B2FQ45|RL3_STRMK RecName: Full=50S ribosomal protein L3
 gi|190010866|emb|CAQ44475.1| putative 50S ribosomal protein L3 [Stenotrophomonas maltophilia
           K279a]
 gi|194347338|gb|ACF50461.1| ribosomal protein L3 [Stenotrophomonas maltophilia R551-3]
 gi|219719884|gb|EED38409.1| ribosomal protein L3 [Stenotrophomonas sp. SKA14]
          Length = 216

 Score =  248 bits (635), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 97/210 (46%), Positives = 129/210 (61%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G V RK GM+ V+  +GR IPVT++     ++   +T++ +GY AVQV  G  +   V+K
Sbjct: 8   GFVGRKAGMSRVFTEDGRSIPVTLIEATPNRIAQIKTVETDGYSAVQVTVGARRAALVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P  G F+   V   + L+EFRV+        VG       F VGQ+VDV G+T GKGF G
Sbjct: 68  PEAGHFAKAKVEAGRGLWEFRVEDAQLGDFAVGGEVKADIFEVGQIVDVQGVTKGKGFQG 127

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHNF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  + + +NLEVV V
Sbjct: 128 TIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVKV 187

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +RGLI V+G VPGA     ++VR + K+
Sbjct: 188 DVERGLIAVRGAVPGAAGGD-VIVRPASKA 216


>gi|256831827|ref|YP_003160554.1| 50S ribosomal protein L3 [Jonesia denitrificans DSM 20603]
 gi|256685358|gb|ACV08251.1| ribosomal protein L3 [Jonesia denitrificans DSM 20603]
          Length = 219

 Score =  248 bits (635), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 93/211 (44%), Positives = 128/211 (60%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
             V+ +KLGMT V++  GR +PVTV+ ++   V   RT+D +GY AVQV  G+   + V+
Sbjct: 11  KAVLGKKLGMTQVWDEAGRLVPVTVVAVEPNVVTQIRTVDNDGYAAVQVATGQIDPRKVT 70

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F    V+P++ + E R   D     +G   +   F  G  VDV G T GKGF+G
Sbjct: 71  KPLKGHFEKAGVTPRRHVTEIRTS-DSGEYSLGQEVTVGVFEAGTKVDVIGTTKGKGFAG 129

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G  A+HG   +HR  GS G    P RVFK  +MAGRMG +R+TV+NL V +V
Sbjct: 130 VMKRHGFAGASASHGAHRNHRKPGSIGAAATPSRVFKGLRMAGRMGHDRMTVQNLTVHAV 189

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D  +G +L+KG VPG  K   +LVR++ K A
Sbjct: 190 DADKGYVLLKGAVPGP-KGGVVLVRNAVKGA 219


>gi|166368484|ref|YP_001660757.1| 50S ribosomal protein L3 [Microcystis aeruginosa NIES-843]
 gi|189042851|sp|B0JI03|RL3_MICAN RecName: Full=50S ribosomal protein L3
 gi|166090857|dbj|BAG05565.1| 50S ribosomal protein L3 [Microcystis aeruginosa NIES-843]
          Length = 212

 Score =  248 bits (635), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 89/212 (41%), Positives = 123/212 (58%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT +++   G  IPVTV+    C V   +T   +GY ++QVG    K K
Sbjct: 1   MSIGILGTKLGMTQIFDNKTGVAIPVTVVQAGPCPVTQVKTKKTDGYESIQVGYKTVKEK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++KP+ G  +   VSP + L E+R+ +D     +G   +   F  G LVDV G TIG+G
Sbjct: 61  ALNKPLLGHLAKAGVSPLRHLIEYRL-EDASAYTLGQEITADIFQEGDLVDVAGTTIGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG  KRHNF     THG S +HR  GSTG    PGRVF  K+MAG+ G  +VT++ L V
Sbjct: 120 FSGYQKRHNFKRGNMTHG-SKNHRLPGSTGAGTTPGRVFPGKRMAGQYGSTQVTIRKLSV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V +D +R LIL+KG VPG    + + +  + K
Sbjct: 179 VKIDSERNLILIKGAVPGKP-GTLLNITPAKK 209


>gi|67458670|ref|YP_246294.1| 50S ribosomal protein L3 [Rickettsia felis URRWXCal2]
 gi|75536865|sp|Q4UMS9|RL3_RICFE RecName: Full=50S ribosomal protein L3
 gi|67004203|gb|AAY61129.1| 50S ribosomal protein L3 [Rickettsia felis URRWXCal2]
          Length = 215

 Score =  248 bits (635), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 113/212 (53%), Positives = 164/212 (77%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G  + K+  
Sbjct: 1   MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGIKDKKISR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+  F++  +SPK KL EFR+ ++ + + + +     YFT GQ VD+T  TIGKGF
Sbjct: 61  VTKPMKQVFANAKISPKTKLKEFRISEE-NFIDIAASLEVDYFTAGQFVDITATTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ 
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +VD +R LI+++G +PG  KNS++ V+D+ K 
Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIKK 210


>gi|296827944|ref|XP_002851250.1| 54S ribosomal protein L9 [Arthroderma otae CBS 113480]
 gi|238838804|gb|EEQ28466.1| 54S ribosomal protein L9 [Arthroderma otae CBS 113480]
          Length = 303

 Score =  248 bits (635), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 104/215 (48%), Positives = 144/215 (66%), Gaps = 3/215 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GMT +Y+   G R P TVL LD  QV+ H+TL+KNGY AVQVG+G    K
Sbjct: 76  LRTGALAIKKGMTAIYDPETGVRTPCTVLQLDGAQVISHKTLEKNGYCAVQVGSGFKSEK 135

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV++PM G FS+  VSPK  + EFRV+ +  LLPVG V +  +F  GQ VDV   + G G
Sbjct: 136 NVTRPMLGHFSTNGVSPKLYIHEFRVKDETGLLPVGEVINADWFQEGQYVDVRSNSRGMG 195

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+GAMK+  F G   +HGVS++HRS GST   Q  G RV+  KKM GRMG ++VT+++L+
Sbjct: 196 FAGAMKKWGFHGQDRSHGVSLTHRSLGSTAPSQGGGSRVYPGKKMPGRMGNHQVTLQSLK 255

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V+ VD ++G+++VKG V G K    + ++D+ K  
Sbjct: 256 VLKVDAEKGIVVVKGSVAGPKGRC-VKIQDAIKKP 289


>gi|19704966|ref|NP_602461.1| 50S ribosomal protein L3 [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|42559658|sp|Q8RIF5|RL3_FUSNN RecName: Full=50S ribosomal protein L3
 gi|19712868|gb|AAL93760.1| LSU ribosomal protein L3P [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 211

 Score =  248 bits (635), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 90/212 (42%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT ++  +G+ +PVTV+      V+  +T +K+GY+A+Q+G  E K KN +
Sbjct: 2   SGILGKKIGMTQIF-EDGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   V P++ + E  V+  D    +G        T    VD+TG + GKG SG
Sbjct: 61  KPLMGIFNKAGVKPQRFVKELEVESVDG-YELGQEIKVDVLTEVGYVDITGTSKGKGTSG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MK+H F G RA+HGVS +HR  GS G    PG+V K KKMAG+ G   VTV+NL+VV V
Sbjct: 120 VMKKHGFSGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKKMAGQHGNATVTVQNLKVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D +  L+L+KG VPGA KNS+++++ + K  +
Sbjct: 180 DAEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210


>gi|227530205|ref|ZP_03960254.1| ribosomal protein L3 [Lactobacillus vaginalis ATCC 49540]
 gi|227349880|gb|EEJ40171.1| ribosomal protein L3 [Lactobacillus vaginalis ATCC 49540]
          Length = 220

 Score =  248 bits (635), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 80/212 (37%), Positives = 123/212 (58%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+   G  +PVTV+ +    V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MAKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQIKTVENDGYNAVQLGFDDKREIL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + E R  +  D + VG       F  G+ VDVTG+T G G+
Sbjct: 61  SNKPEQGHAAKANTTPKRFIGEIRDAELGDDIKVGDEVKADVFNEGETVDVTGVTKGHGY 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G + + N      +HG S  HR  GS G      RVFK  K+ GRMGG  VT+++LEVV
Sbjct: 121 QGNIHKDNQSRGPMSHG-SRYHRRPGSLGPI--INRVFKGMKLPGRMGGKTVTMQHLEVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD    ++L+KG VPGA K S++ +++S K+
Sbjct: 178 KVDLDNNVLLIKGNVPGANK-SYVTIKNSVKA 208


>gi|237717399|ref|ZP_04547880.1| 50S ribosomal protein L3 [Bacteroides sp. D1]
 gi|262406164|ref|ZP_06082714.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_22]
 gi|294644059|ref|ZP_06721836.1| 50S ribosomal protein L3 [Bacteroides ovatus SD CC 2a]
 gi|294807315|ref|ZP_06766128.1| 50S ribosomal protein L3 [Bacteroides xylanisolvens SD CC 1b]
 gi|298483064|ref|ZP_07001245.1| 50S ribosomal protein L3 [Bacteroides sp. D22]
 gi|229443382|gb|EEO49173.1| 50S ribosomal protein L3 [Bacteroides sp. D1]
 gi|262357039|gb|EEZ06129.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_22]
 gi|292640583|gb|EFF58824.1| 50S ribosomal protein L3 [Bacteroides ovatus SD CC 2a]
 gi|294445480|gb|EFG14134.1| 50S ribosomal protein L3 [Bacteroides xylanisolvens SD CC 1b]
 gi|295085428|emb|CBK66951.1| LSU ribosomal protein L3P [Bacteroides xylanisolvens XB1A]
 gi|298270808|gb|EFI12388.1| 50S ribosomal protein L3 [Bacteroides sp. D22]
          Length = 205

 Score =  248 bits (635), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 84/204 (41%), Positives = 125/204 (61%), Gaps = 4/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PK+ L EF+  + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKRAGVTPKRHLAEFK--EFETELNLGDTITVEMFNDASFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  +ATHG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
                L+LVKG +PG  K S +L+
Sbjct: 181 IADHNLLLVKGSIPGC-KGSIVLI 203


>gi|289550143|ref|YP_003471047.1| LSU ribosomal protein L3p (L3e) [Staphylococcus lugdunensis
           HKU09-01]
 gi|289179675|gb|ADC86920.1| LSU ribosomal protein L3p (L3e) [Staphylococcus lugdunensis
           HKU09-01]
          Length = 220

 Score =  248 bits (635), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 92/221 (41%), Positives = 122/221 (55%), Gaps = 11/221 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+QVG  + +   
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60

Query: 61  V--------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
                    +KP  G       +PK+ + EFR    D+   VG   S   F  G ++DVT
Sbjct: 61  KDAKSNKYATKPAEGHAKKAGTAPKRFIREFRNVNVDE-YEVGQEVSVDTFEAGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH        HG    HR+ GS G   D  RVFK +K  GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMAHGSH-FHRAPGSVGMASDASRVFKGQKAPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           TV+NLEVV VD + G+ILVKG VPGAKK   + ++ S K  
Sbjct: 179 TVQNLEVVQVDTENGVILVKGNVPGAKKG-LVEIKSSIKKG 218


>gi|242765739|ref|XP_002341035.1| 50S ribosomal protein L3 [Talaromyces stipitatus ATCC 10500]
 gi|218724231|gb|EED23648.1| 50S ribosomal protein L3 [Talaromyces stipitatus ATCC 10500]
          Length = 300

 Score =  248 bits (634), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 101/215 (46%), Positives = 140/215 (65%), Gaps = 3/215 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G++A K GMT +Y+   G+R P TVL LD CQV+ H+T+DK+GY AVQVGAG  K +
Sbjct: 72  LRTGLLAIKKGMTGLYDPETGKRTPCTVLQLDRCQVISHKTMDKHGYFAVQVGAGFKKPE 131

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++K + G FS   V+PK+ + EFRV+  + LL +G   +  +F VGQ VD    T GKG
Sbjct: 132 RLTKALVGHFSVNEVAPKRYVHEFRVKDGNGLLEIGHTLTADWFQVGQYVDARSNTKGKG 191

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKRH F G   +HGVS++HRS GS G  Q  G RV+  KKMAG MG  + T++NL+
Sbjct: 192 FAGVMKRHGFHGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNVQNTLQNLK 251

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V+ VD   G+I+V G V G  K   + ++D+ K  
Sbjct: 252 VLEVDPANGIIVVNGSVSGP-KGCLVKLQDALKKP 285


>gi|254422678|ref|ZP_05036396.1| ribosomal protein L3 [Synechococcus sp. PCC 7335]
 gi|196190167|gb|EDX85131.1| ribosomal protein L3 [Synechococcus sp. PCC 7335]
          Length = 212

 Score =  248 bits (634), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 90/209 (43%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT V++  G  IPVTV+    C V   +T   +GY +VQ+G GE K K 
Sbjct: 1   MSVGILGTKLGMTQVFDETGNAIPVTVIQAGPCVVTQIKTEKTDGYSSVQIGYGEVKEKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G       SP + L E+RV  D     +G   +   F  GQ +DV+G++IGKGF
Sbjct: 61  LNRPKLGHLKKSGASPLRHLREYRVS-DTGEFELGQALAADRFEAGQTIDVSGISIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KR+NF     +HG S +HR+ GSTG    PGRV+  KKMAGRMG  +VT++ L VV
Sbjct: 120 AGNQKRNNFRRGPMSHG-SKNHRAPGSTGAGTTPGRVYPGKKMAGRMGSEKVTIRKLSVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            VD  R L+LVKG VPG K  + + +  +
Sbjct: 179 RVDSDRNLLLVKGGVPG-KAGTLLNITPA 206


>gi|196019520|ref|XP_002118992.1| hypothetical protein TRIADDRAFT_35046 [Trichoplax adhaerens]
 gi|190577417|gb|EDV18523.1| hypothetical protein TRIADDRAFT_35046 [Trichoplax adhaerens]
          Length = 217

 Score =  248 bits (634), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 104/214 (48%), Positives = 150/214 (70%), Gaps = 2/214 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A+K+GMT ++   G  IPVT++ +D   V+  +T +KNGY  VQ+ A + K + +
Sbjct: 5   RTGLIAKKVGMTQIFKENGEVIPVTMILVDENIVLSVKTKEKNGYNGVQLAAFDQKPQRL 64

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SK ++G F    +S KKK+ EF V ++ +LL VG     ++F   Q VD+TG++IGKG++
Sbjct: 65  SKSVKGSFEKAKISAKKKMKEFIVHEN-NLLKVGDKVDVNHFKKNQYVDITGISIGKGYA 123

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF GL ATHGVSISHRS GSTG  QDPGRVFK KKMAG+MG  +VT +N++V+ 
Sbjct: 124 GTMKRHNFKGLEATHGVSISHRSAGSTGQCQDPGRVFKGKKMAGQMGNKKVTTQNIKVID 183

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           +D +  L++VKG VPG   N ++ ++D+ K AV 
Sbjct: 184 IDSELNLLIVKGAVPGCN-NGYLYIKDAIKKAVP 216


>gi|297567284|ref|YP_003686256.1| 50S ribosomal protein L3 [Meiothermus silvanus DSM 9946]
 gi|296851733|gb|ADH64748.1| 50S ribosomal protein L3 [Meiothermus silvanus DSM 9946]
          Length = 212

 Score =  248 bits (634), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 101/216 (46%), Positives = 130/216 (60%), Gaps = 7/216 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  K+GMT V+    R +PVTV+    C VV  RT DK+GY AVQ+G    K + V+
Sbjct: 2   KGILGTKIGMTQVW-KNDRAVPVTVILAGPCPVVQRRTPDKDGYEAVQLGFRPQKAQRVN 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F+   V P + L E R        P G   +   F  G+ VDVTG + G+GF G
Sbjct: 61  KPLKGHFAKAGVEPVRYLKEIR-----GFSPEGDTVTVEIFAAGEKVDVTGTSKGRGFQG 115

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKR NF G  ATHG    HR  GS G R+ PGRV+K KKMAGRMGG RVTV+NLEVV V
Sbjct: 116 VMKRWNFAGGNATHGAHKVHRHPGSIGNRKTPGRVYKGKKMAGRMGGERVTVQNLEVVDV 175

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
             +  LILVKG VPGA   + ++VR++ ++     G
Sbjct: 176 VPEENLILVKGAVPGAN-GTLVVVRETVRTPAKQGG 210


>gi|197117323|ref|YP_002137750.1| 50S ribosomal protein L3 [Geobacter bemidjiensis Bem]
 gi|226725180|sp|B5EFQ0|RL3_GEOBB RecName: Full=50S ribosomal protein L3
 gi|197086683|gb|ACH37954.1| ribosomal protein L3 [Geobacter bemidjiensis Bem]
          Length = 211

 Score =  248 bits (634), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 89/212 (41%), Positives = 123/212 (58%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT ++  +GRRI VTV+    C VV  +++ K+GY A+QVG G      
Sbjct: 1   MNKGLIGKKLGMTQIFAEDGRRIAVTVVEAGPCVVVQKKSVAKDGYSAIQVGFGAKDASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +    G              E R+   D    +G V   + F  G LVDVTG +IGKGF
Sbjct: 61  ANAAQVGHCKGAGAGVFTHYRELRMDNTDA-YKLGDVIEAAVFEEGDLVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR  F G R++HG S  HR+ GS GC   P RVFKNKKM G++G  +VTV+ L+VV
Sbjct: 120 AGVIKRWGFKGGRSSHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQLGNEKVTVQRLKVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD    LIL+ G +PG+  N  +L++DS K+
Sbjct: 179 RVDAADNLILLGGAIPGSA-NGVVLIKDSVKA 209


>gi|317507409|ref|ZP_07965143.1| 50S ribosomal protein L3 [Segniliparus rugosus ATCC BAA-974]
 gi|316254294|gb|EFV13630.1| 50S ribosomal protein L3 [Segniliparus rugosus ATCC BAA-974]
          Length = 212

 Score =  248 bits (634), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 90/212 (42%), Positives = 121/212 (57%), Gaps = 2/212 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   R +PVTV+      V   RT +++ Y AVQ+  G+   + V+
Sbjct: 1   MGLLGAKLGMTQVFDERNRVVPVTVIRTGVNIVTQIRTPERDKYSAVQLAFGQIDPRKVN 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    V+P++ L E R+ +D     VG     S F  G LVDVTG + GKGF+G
Sbjct: 61  KPLTGQFEKAGVTPRRHLAELRL-EDVSGYEVGQQLDVSVFADGDLVDVTGTSKGKGFAG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G  A HG    HR  GS G    PGRVFK  +MAGRMG  + T +NL V  V
Sbjct: 120 TMKRHGFKGQGAAHGAHKVHRRPGSIGACAFPGRVFKGTRMAGRMGNAKTTTQNLTVFRV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D + G++L+KG VPG +    + VR + K  V
Sbjct: 180 DPEAGVLLIKGAVPG-RDGGLVFVRSAVKKGV 210


>gi|296130495|ref|YP_003637745.1| 50S ribosomal protein L3 [Cellulomonas flavigena DSM 20109]
 gi|296022310|gb|ADG75546.1| 50S ribosomal protein L3 [Cellulomonas flavigena DSM 20109]
          Length = 219

 Score =  248 bits (634), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 91/211 (43%), Positives = 127/211 (60%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           + ++  KLGMT V++  GR +PVTVL +    V   R+ + +GY AVQ+  G+   + V+
Sbjct: 11  TALLGTKLGMTQVWDEAGRLVPVTVLAVGTNVVTQVRSAESDGYAAVQLAYGQIDPRKVT 70

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F    V+P++ + E R     +   +G   +   F  GQ+VDVTG T GKG +G
Sbjct: 71  KPLKGHFEKAGVTPRRHVAEIRTSNAAEFT-LGQEITAGAFEAGQVVDVTGTTKGKGTAG 129

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    P RVFK  KMAGRMG  R T +NL V +V
Sbjct: 130 VMKRHGFHGVGASHGAHRNHRKPGSIGGASTPSRVFKGLKMAGRMGVARQTTQNLTVHAV 189

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+LVKG VPG  K   ++VR + K A
Sbjct: 190 DAEKGLLLVKGAVPGP-KGGVVVVRSAVKGA 219


>gi|169830436|ref|YP_001716418.1| ribosomal protein L3 [Candidatus Desulforudis audaxviator MP104C]
 gi|212288256|sp|B1I1I8|RL3_DESAP RecName: Full=50S ribosomal protein L3
 gi|169637280|gb|ACA58786.1| ribosomal protein L3 [Candidatus Desulforudis audaxviator MP104C]
          Length = 213

 Score =  248 bits (634), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 126/212 (59%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RKLGM+  +  EG  +PVT++    C VV  +T D +GY AVQ+G  E   K 
Sbjct: 4   MAKGILGRKLGMSRFFTAEGVAVPVTLIEAGPCTVVQKKTPDTDGYSAVQLGFMEQPAKR 63

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++P++G F    V P + L E RV    D   VG V     F VG++VDV G + GKGF
Sbjct: 64  VNRPLKGHFGRAGVKPSRFLRELRVADAAD-YEVGQVLKADLFDVGEIVDVVGTSKGKGF 122

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH F      HG S  HR  G+    + P RVFK +K+ GR+GG RVTV+NLE+V
Sbjct: 123 AGGIKRHGFHRGPMGHG-SKYHRRPGAL-AAKGPARVFKGRKLPGRLGGVRVTVQNLEIV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +R L+ V+G VPG  + S ++V+ + K 
Sbjct: 181 KVDPERNLLAVRGAVPG-IRGSLVVVKSAVKG 211


>gi|296329220|ref|ZP_06871721.1| 50S ribosomal protein L3 [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296153576|gb|EFG94393.1| 50S ribosomal protein L3 [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 211

 Score =  248 bits (634), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 90/212 (42%), Positives = 134/212 (63%), Gaps = 3/212 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT ++  +G+ +PVTV+      V+  +T +K+GY+A+Q+G  E K KN +
Sbjct: 2   SGILGKKIGMTQIF-EDGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   V P++ + E  V+  D    +G        T    VD+TG + GKG SG
Sbjct: 61  KPLMGIFNKAGVKPQRFVKELEVESVDG-YELGQEIKVDVLTEVGYVDITGTSKGKGTSG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MK+H F G RA+HGVS +HR  GS G    PG+V K KKMAG+ G   VTV+NL+VV V
Sbjct: 120 VMKKHGFAGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKKMAGQHGNATVTVQNLKVVKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D +  L+L+KG VPGA KNS+++++ + K  +
Sbjct: 180 DAEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210


>gi|270291133|ref|ZP_06197356.1| 50S ribosomal protein L3 [Pediococcus acidilactici 7_4]
 gi|304385414|ref|ZP_07367759.1| 50S ribosomal protein L3 [Pediococcus acidilactici DSM 20284]
 gi|270280529|gb|EFA26364.1| 50S ribosomal protein L3 [Pediococcus acidilactici 7_4]
 gi|304328621|gb|EFL95842.1| 50S ribosomal protein L3 [Pediococcus acidilactici DSM 20284]
          Length = 212

 Score =  248 bits (634), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 79/214 (36%), Positives = 118/214 (55%), Gaps = 4/214 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
             G++ +K+GMT V+   G  IPVTV+      V+  +T++ +GY A Q+G  + +    
Sbjct: 3   TKGILGKKVGMTQVFTEAGELIPVTVIDTTPNVVLQLKTVENDGYAAAQLGFDDKRQVLS 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP +G  +  N +PK+ + E R  +  + + VG   +   F  G  VDVTG T G GF 
Sbjct: 63  NKPEQGHVAKANTNPKRFIHEIRDVELGEDVKVGDKIAADIFEAGDFVDVTGTTKGHGFQ 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +K+         HG S  HR  GS G      RVF  KK+ GRMG   VT++NLE+V 
Sbjct: 123 GVIKKDGQRRGPMAHG-SRYHRRPGSLGAI--INRVFPGKKLPGRMGNKTVTIQNLEIVK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            D +  ++LVKG VPGAKK S+++V+ + K+   
Sbjct: 180 ADTENNVLLVKGNVPGAKK-SYVVVKSTVKNTSK 212


>gi|87124962|ref|ZP_01080809.1| 50S ribosomal protein L3 [Synechococcus sp. RS9917]
 gi|86167282|gb|EAQ68542.1| 50S ribosomal protein L3 [Synechococcus sp. RS9917]
          Length = 218

 Score =  248 bits (634), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 79/216 (36%), Positives = 128/216 (59%), Gaps = 3/216 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +G+ +PVT++    C++   +T + +GY AVQ+G G+ + K 
Sbjct: 1   MSIGILGKKLGMSQLFDEQGKAVPVTLIEAGPCRITQLKTTETDGYAAVQIGFGDTREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G  +       + L E+RV  D   L +G   +   F  GQ VDV+G ++G+GF
Sbjct: 61  VNKPAKGHLAKSGEELLRHLSEYRVD-DVAGLELGGAITVGDFEAGQKVDVSGDSMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     THG S +HR  GSTG    PGR++  K+MAGR GG ++T + L ++
Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLTIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            +D +R L++VKG VPG    S + +R + +     
Sbjct: 179 KIDSERNLLVVKGSVPGKP-GSLLNIRPANRVGAKP 213


>gi|318042564|ref|ZP_07974520.1| 50S ribosomal protein L3 [Synechococcus sp. CB0101]
          Length = 215

 Score =  248 bits (634), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 86/216 (39%), Positives = 127/216 (58%), Gaps = 3/216 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++ EGR IPVTV+    C++   +T   +GY AVQ+G G+ + K 
Sbjct: 1   MSIGILGKKLGMSQFFDDEGRSIPVTVIEAGPCRITQLKTDSTDGYTAVQLGFGDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G  +     P + L E+RV    D L +G   + + F  GQ VDV+G TIG+GF
Sbjct: 61  VNKPAKGHLAKSGSEPLRHLKEYRVD-TVDGLELGGAITVAAFEAGQKVDVSGDTIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     THG S +HR  GSTG    PGRV+  K+MAGR GG ++T + L ++
Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRVYPGKRMAGRYGGKQITTRGLVIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            VD +R L++VKG VPG    + + +  + +     
Sbjct: 179 KVDAERNLLVVKGSVPGKP-GALLNILPAKRVGAKA 213


>gi|304405616|ref|ZP_07387275.1| 50S ribosomal protein L3 [Paenibacillus curdlanolyticus YK9]
 gi|304345655|gb|EFM11490.1| 50S ribosomal protein L3 [Paenibacillus curdlanolyticus YK9]
          Length = 207

 Score =  248 bits (634), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 84/210 (40%), Positives = 120/210 (57%), Gaps = 4/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GMT V+  EG  +PVTV+      V+  +  + +GY AVQ+G  + K KN +
Sbjct: 2   KGILGKKIGMTQVFTAEGNVVPVTVIEAGPNVVLQKKDQENDGYEAVQLGFVDKKEKNST 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP +G     N +PK+ + E R     +   VG V     FT G+ VDVTG++ GKGF G
Sbjct: 62  KPAQGHAKKANTAPKRYIREIRGINLGE-YEVGQVIKADVFTAGEFVDVTGVSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR        +HG S  HR  GS G  Q   RV K K++ G MG   +T++NLEVV V
Sbjct: 121 VIKRWGQSTGPMSHG-SRYHRGPGSMGSIQ-ANRVPKGKRLPGHMGSETITIQNLEVVRV 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R +ILVKG +PG  KN+ + V+ + K 
Sbjct: 179 DAERNVILVKGSIPGP-KNALVKVKLTVKK 207


>gi|258543821|ref|ZP_05704055.1| 50S ribosomal protein L3 [Cardiobacterium hominis ATCC 15826]
 gi|258520910|gb|EEV89769.1| 50S ribosomal protein L3 [Cardiobacterium hominis ATCC 15826]
          Length = 216

 Score =  248 bits (634), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 94/213 (44%), Positives = 132/213 (61%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V +K+GMT ++N +G    VTV+ +    +   +TL  +GY AVQV  GE K   
Sbjct: 5   MTMGLVGQKIGMTRIFNEDGSACAVTVIEVKPNIISQIKTLATDGYNAVQVSVGERKTNR 64

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQ-KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            SK + G F+  NV+    + EFR+  +D     +GS    S F+ GQ VDV G ++GKG
Sbjct: 65  TSKGLAGHFAKANVAAGVVIKEFRIAAEDVAQFSLGSAVDVSLFSEGQRVDVRGRSVGKG 124

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRH+F G R THG S+SHR  GS G  Q PGRVFK KKM+G +G    + +NLE+
Sbjct: 125 FAGTIKRHHFSGQRKTHGNSLSHRVPGSIGQNQTPGRVFKGKKMSGHLGNKMRSTQNLEI 184

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
             VD +R L+L+KG VPGA K  ++++R S K+
Sbjct: 185 ARVDGERNLLLIKGAVPGA-KGGFVVIRPSVKA 216


>gi|51473839|ref|YP_067596.1| 50S ribosomal protein L3 [Rickettsia typhi str. Wilmington]
 gi|81826293|sp|Q68W78|RL3_RICTY RecName: Full=50S ribosomal protein L3
 gi|51460151|gb|AAU04114.1| 50S ribosomal protein L3 [Rickettsia typhi str. Wilmington]
          Length = 215

 Score =  248 bits (634), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 115/213 (53%), Positives = 165/213 (77%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+K+GMT V+N +G RI +T++ +D CQVV H+TL K+GY A+ +G  + K+  
Sbjct: 1   MRTGIIAQKIGMTSVFNDKGERISLTLVKVDGCQVVGHKTLAKHGYNALVIGVKDQKISR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+  F++  +SPK KL EFR+ +D + + + S+    +F+VGQ VD+T  TIGKGF
Sbjct: 61  VTKPMKQVFANAKISPKTKLKEFRISED-NFIDIASILEVDHFSVGQFVDITATTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ 
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           ++D  R LI+++G +PG  KNS++LV+D+ K A
Sbjct: 180 AIDTNRKLIMIQGSIPG-HKNSYLLVKDAIKKA 211


>gi|310779596|ref|YP_003967929.1| LSU ribosomal protein L3P [Ilyobacter polytropus DSM 2926]
 gi|309748919|gb|ADO83581.1| LSU ribosomal protein L3P [Ilyobacter polytropus DSM 2926]
          Length = 208

 Score =  248 bits (634), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 88/209 (42%), Positives = 125/209 (59%), Gaps = 3/209 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++A+K+GMT ++   G+ +PVTV+      V+  +T +K+GY A+Q+G  E K KN +K
Sbjct: 3   GILAKKIGMTQIF-ENGKFVPVTVVEAGPNFVLQKKTEEKDGYTALQLGFDEKKEKNTTK 61

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           PM G F+   V P + + E +     +   +G           + VD+ G + GKG +G 
Sbjct: 62  PMMGIFNKAGVKPLRFVRELKADS-VEGYELGQEIKVDILDGVEFVDIKGTSKGKGTAGV 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF G RATHGVS +HR  GS G    P +V K  KMAGR G   VTV+NL+VV VD
Sbjct: 121 MKRHNFSGNRATHGVSRNHRLGGSIGQSSFPSKVLKGLKMAGRYGNAAVTVQNLKVVKVD 180

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  L+L+KG VPG  KN +I+V+ + K 
Sbjct: 181 VENNLLLIKGAVPGP-KNGYIVVKPAIKK 208


>gi|308233852|ref|ZP_07664589.1| LSU ribosomal protein L3P [Atopobium vaginae DSM 15829]
 gi|328943560|ref|ZP_08241025.1| 50S ribosomal protein L3 [Atopobium vaginae DSM 15829]
 gi|327491529|gb|EGF23303.1| 50S ribosomal protein L3 [Atopobium vaginae DSM 15829]
          Length = 206

 Score =  248 bits (634), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 88/209 (42%), Positives = 122/209 (58%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M + ++ RK+GMT V++     +PVTV+    C V   +T   +GY AVQ+G G+ K K+
Sbjct: 1   MVTTILGRKIGMTQVWDENDNIVPVTVIQAGPCTVSQVKTKATDGYDAVQIGFGDIKAKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP+ G F + NV P + L E RV+  +D    G V +   F     VDV G + GKGF
Sbjct: 61  VNKPLAGHFKAHNVEPARYLAEVRVENGEDH-KCGDVVTVKDFADVAAVDVIGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF      HG S + R  GS G    P RV K   MAG MG  RVTVKNL++V
Sbjct: 120 QGTIKRWNFSCGPKAHG-SRNQREPGSIGQCSYPARVRKGLHMAGHMGDERVTVKNLKLV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            +D+++ L+LVKG VPG  KN+ + +R +
Sbjct: 179 RIDEEQNLMLVKGAVPGG-KNALVSIRMA 206


>gi|302498268|ref|XP_003011132.1| hypothetical protein ARB_02654 [Arthroderma benhamiae CBS 112371]
 gi|291174680|gb|EFE30492.1| hypothetical protein ARB_02654 [Arthroderma benhamiae CBS 112371]
 gi|326474709|gb|EGD98718.1| 50S ribosomal protein L3 [Trichophyton tonsurans CBS 112818]
 gi|326484840|gb|EGE08850.1| 50S ribosomal protein L3 [Trichophyton equinum CBS 127.97]
          Length = 304

 Score =  248 bits (634), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 101/215 (46%), Positives = 144/215 (66%), Gaps = 3/215 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GMT +Y+   G R P TVL LD  QV+ H+T +KNGY AVQVG+G    +
Sbjct: 77  LRTGALAIKKGMTAIYDPETGVRTPCTVLQLDGAQVISHKTFEKNGYCAVQVGSGLKNER 136

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV++PM G FS+  VSPK+ + EFRV+ +  LLP+G V +  +F  GQ VDV   + G G
Sbjct: 137 NVTRPMLGHFSANGVSPKRHIHEFRVKDETGLLPIGEVINADWFQEGQYVDVRSNSRGMG 196

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+GAMK+  F G   +HGVS++HRS GST   Q  G RV+  KKM GRMG ++VT+++L+
Sbjct: 197 FAGAMKKWGFHGQDRSHGVSLTHRSLGSTAPSQGGGSRVYPGKKMPGRMGNHQVTLQSLK 256

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V+ VD ++G+++VKG V G K    + ++D+ K  
Sbjct: 257 VLKVDAEKGIVVVKGGVAGPKGRC-VKIQDAIKKP 290


>gi|323700806|ref|ZP_08112718.1| 50S ribosomal protein L3 [Desulfovibrio sp. ND132]
 gi|323460738|gb|EGB16603.1| 50S ribosomal protein L3 [Desulfovibrio desulfuricans ND132]
          Length = 210

 Score =  248 bits (633), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 86/204 (42%), Positives = 120/204 (58%), Gaps = 2/204 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT ++  +G   PVTV+    C V+  +T DK GY A+Q+G      + V+K
Sbjct: 6   GLLGRKLGMTRIFKSDGTICPVTVIEAGPCAVMQIKTTDKEGYNALQLGYDTVPERKVNK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           PM+G  +    +  + L EF ++  D    +G   +   F  G+ V VTG + GKGF G 
Sbjct: 66  PMKGHMAKAGDALYRHLKEFPLEVVDG-YELGQEITVDIFAAGEKVKVTGTSKGKGFQGV 124

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF G RA+HG    HR  GS G    PGRV+K K+MAG MG  RVT+ N+E+V V 
Sbjct: 125 MKRHNFNGSRASHGAEKVHRVPGSVGNATYPGRVWKGKRMAGHMGSERVTLSNVEIVDVR 184

Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207
            +  ++LVKG VPG   N  +++R
Sbjct: 185 PEDNVLLVKGQVPGPN-NGLVMIR 207


>gi|29348136|ref|NP_811639.1| 50S ribosomal protein L3 [Bacteroides thetaiotaomicron VPI-5482]
 gi|253569590|ref|ZP_04847000.1| 50S ribosomal protein L3 [Bacteroides sp. 1_1_6]
 gi|298386181|ref|ZP_06995738.1| 50S ribosomal protein L3 [Bacteroides sp. 1_1_14]
 gi|42559628|sp|Q8A476|RL3_BACTN RecName: Full=50S ribosomal protein L3
 gi|29340039|gb|AAO77833.1| 50S ribosomal protein L3 [Bacteroides thetaiotaomicron VPI-5482]
 gi|251841609|gb|EES69690.1| 50S ribosomal protein L3 [Bacteroides sp. 1_1_6]
 gi|298261409|gb|EFI04276.1| 50S ribosomal protein L3 [Bacteroides sp. 1_1_14]
          Length = 205

 Score =  248 bits (633), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 82/204 (40%), Positives = 125/204 (61%), Gaps = 4/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PK+ L EF+  + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKRAGVTPKRHLAEFK--EFETELNLGDTITVEMFNDATFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  +ATHG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
                L+L+KG +PG  K S +++
Sbjct: 181 IADHNLLLIKGSIPGC-KGSIVII 203


>gi|324528045|gb|ADY48869.1| 50S ribosomal protein L3 [Ascaris suum]
          Length = 231

 Score =  248 bits (633), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 81/221 (36%), Positives = 125/221 (56%), Gaps = 6/221 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RKLGM+ ++  +G  IPVT++ ++   +   +T + +GY A+Q+G  + K K+
Sbjct: 1   MMKGLVGRKLGMSQMFATDGTIIPVTMIEIEPNVITQIKTTETDGYNAIQIGVEDKKQKH 60

Query: 61  VSKPMRGFFSSVNVS-PKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
            ++P  G      +   K+   EF V +D+     +G   +   F+ G++VDV G + GK
Sbjct: 61  TTQPEMGHVKKAGLETGKRVYKEFTVGEDEVSNYTLGQELTVDIFSDGEIVDVQGTSKGK 120

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF GA+KRHN      +HG S  HR  GS G       VFK K + G MG   VT +NLE
Sbjct: 121 GFQGAIKRHNQSRGPMSHG-SRYHRRPGSMGAVAPQ--VFKGKNLPGHMGSKTVTTQNLE 177

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           +V VD KR ++++KG VPGAKK S++ ++ + K     + K
Sbjct: 178 IVKVDTKRNVLIIKGNVPGAKK-SFVTIKAAVKGNGRAQNK 217


>gi|221194518|ref|ZP_03567575.1| 50S ribosomal protein L3 [Atopobium rimae ATCC 49626]
 gi|221185422|gb|EEE17812.1| 50S ribosomal protein L3 [Atopobium rimae ATCC 49626]
          Length = 206

 Score =  248 bits (633), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 87/209 (41%), Positives = 119/209 (56%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M + ++ RKLGMT V++     +PVTV+    C V   +T + +GY AVQ+G G+   K+
Sbjct: 1   MVNTILGRKLGMTQVWDENDNVVPVTVILAGPCTVSQVKTAETDGYDAVQIGFGDISEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM G F +  V P + L E RV    +    G   + + F+    VDV G + GKGF
Sbjct: 61  VNKPMAGHFKAQGVEPMRYLREVRV-PAGEEHKCGDTVTVADFSEVTAVDVIGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF     THG S + R  GS G    P RV K   M G MG  RVTVKNL++V
Sbjct: 120 QGTIKRWNFSRGPMTHG-SRNQRRPGSIGQCAYPARVRKGLHMYGHMGAERVTVKNLKLV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            VD ++ L+L+KG VPG  KN+ + VR +
Sbjct: 179 RVDAEQNLMLIKGAVPGG-KNALVQVRMA 206


>gi|34811555|pdb|1PNU|B Chain B, Crystal Structure Of A Streptomycin Dependent Ribosome
           From Escherichia Coli, 50s Subunit Of 70s Ribosome. This
           File, 1pnu, Contains Only Molecules Of The 50s Ribosomal
           Subunit. The 30s Subunit, Mrna, P-Site Trna, And A-Site
           Trna Are In The Pdb File 1pns.
 gi|34811608|pdb|1PNY|B Chain B, Crystal Structure Of The Wild Type Ribosome From E. Coli,
           50s Subunit Of 70s Ribosome. This File, 1pny, Contains
           Only Molecules Of The 50s Ribosomal Subunit. The 30s
           Subunit Is In The Pdb File 1pnx.
 gi|56966347|pdb|1VOR|E Chain E, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           50s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|56966400|pdb|1VOU|E Chain E, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           50s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|56966453|pdb|1VOW|E Chain E, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           50s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|56966506|pdb|1VOY|E Chain E, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           50s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|56966559|pdb|1VP0|E Chain E, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           50s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400
          Length = 205

 Score =  248 bits (633), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 89/211 (42%), Positives = 122/211 (57%), Gaps = 7/211 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  K+GMT ++    R IPVTV+    C +V  +T   +GY AVQ+G      + V+
Sbjct: 2   KGILGTKIGMTQIW-KNDRAIPVTVVLAGPCPIVQRKTAQTDGYEAVQIGYAPKAERKVN 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KPM+G F+   V+P + L EFR        P G   +   F  G+ +D TG + GKG  G
Sbjct: 61  KPMQGHFAKAGVAPTRILREFR-----GFAPDGDSVNVDIFAEGEKIDATGTSKGKGTQG 115

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKR NF G  A+HG    HR  GS G R+ PGRV+K K+MAG MG  RVTV+NLEVV +
Sbjct: 116 VMKRWNFAGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGHMGMERVTVQNLEVVEI 175

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
                LILVKG +PGA     +++R + K++
Sbjct: 176 RAGENLILVKGAIPGAN-GGLVVLRSAAKAS 205


>gi|222150445|ref|YP_002559598.1| 50S ribosomal protein L3 [Macrococcus caseolyticus JCSC5402]
 gi|254803679|sp|B9E9J1|RL3_MACCJ RecName: Full=50S ribosomal protein L3
 gi|222119567|dbj|BAH16902.1| 50S ribosomal protein L3 [Macrococcus caseolyticus JCSC5402]
          Length = 220

 Score =  248 bits (633), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 86/221 (38%), Positives = 121/221 (54%), Gaps = 11/221 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY ++Q+G  + +   
Sbjct: 1   MTKGILGRKVGMTQVFGENGELIPVTVVEAAQNVVLQKKTEEVDGYSSIQIGFEDKQAYK 60

Query: 61  V--------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
                    +KP  G       +PK+ + EFR   D +   VG   +   F  G +VDVT
Sbjct: 61  ADRKSNKFATKPAEGHAKKAGTAPKRFIREFR-NVDTEAYEVGQEVTVDTFQTGDIVDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH       +HG S  HR  GS G   D  +VFK K + GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQSRGPMSHG-SRYHRRPGSMGMASDASKVFKGKALPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           T++NLE+V VD +  +ILVKG VPG KK   + ++ S K  
Sbjct: 179 TMQNLEIVKVDAENNVILVKGNVPGPKKG-LVKIQTSIKKG 218


>gi|319796217|ref|YP_004157857.1| 50S ribosomal protein l3 [Variovorax paradoxus EPS]
 gi|315598680|gb|ADU39746.1| 50S ribosomal protein L3 [Variovorax paradoxus EPS]
          Length = 226

 Score =  248 bits (633), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 86/215 (40%), Positives = 127/215 (59%), Gaps = 3/215 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  +PVTV+ + N +V   ++ + +GY+A+QV  G  K   V+K
Sbjct: 8   GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQIKSQETDGYVALQVTFGSRKASRVTK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121
           P  G  +   V   + + EFRV  +       G V +  S F+VGQ VDV G +IGKGF+
Sbjct: 68  PEAGHLAKAGVEAGEIIQEFRVTAETAGQHKAGGVIAAGSVFSVGQKVDVQGTSIGKGFA 127

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHN    RA+HG S SH   GS G  QDPGRVF  K+M G +G    T +NL+V  
Sbjct: 128 GTIKRHNMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTKTTQNLDVFR 187

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           +D+ R L+L+KG +PG+ K  ++ VR + K+    
Sbjct: 188 IDEARQLLLIKGAIPGS-KGGFVTVRPAIKAKPQA 221


>gi|219681870|ref|YP_002468256.1| 50S ribosomal protein L3 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682425|ref|YP_002468809.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471575|ref|ZP_05635574.1| 50S ribosomal protein L3 [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|254803660|sp|B8D9U7|RL3_BUCA5 RecName: Full=50S ribosomal protein L3
 gi|254803661|sp|B8D849|RL3_BUCAT RecName: Full=50S ribosomal protein L3
 gi|219622158|gb|ACL30314.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624713|gb|ACL30868.1| 50S ribosomal protein L3 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086246|gb|ADP66328.1| 50S ribosomal protein L3 [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086823|gb|ADP66904.1| 50S ribosomal protein L3 [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087410|gb|ADP67490.1| 50S ribosomal protein L3 [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087905|gb|ADP67984.1| 50S ribosomal protein L3 [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 209

 Score =  248 bits (633), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 91/209 (43%), Positives = 134/209 (64%), Gaps = 2/209 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  EG  IPVTV+ L   ++   + ++ + Y A+QV  G  K   ++
Sbjct: 2   IGLVGKKIGMTRIFTEEGTSIPVTVIELKENRITQVKNINTDLYCAIQVTTGIKKSNRLN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P + L+EFR  K+++   +G   + + F   + VD+TG++ GKGFSG
Sbjct: 62  KPQSGHFLKSGVTPGRGLWEFRTDKNNNF-KIGQSITINIFNNVKKVDITGISKGKGFSG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG++G  RVTV++L +V +
Sbjct: 121 TVKRWNFHTQDATHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGQLGNTRVTVQSLNIVRI 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D++R L+LVKG VPGA   S ++V+ + K
Sbjct: 181 DERRNLLLVKGAVPGA-TGSDLIVKPAIK 208


>gi|134103264|ref|YP_001108925.1| 50S ribosomal protein L3 [Saccharopolyspora erythraea NRRL 2338]
 gi|291007943|ref|ZP_06565916.1| 50S ribosomal protein L3 [Saccharopolyspora erythraea NRRL 2338]
 gi|166234589|sp|A4FPM5|RL3_SACEN RecName: Full=50S ribosomal protein L3
 gi|133915887|emb|CAM06000.1| 50S ribosomal protein L3 [Saccharopolyspora erythraea NRRL 2338]
          Length = 216

 Score =  248 bits (633), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 88/212 (41%), Positives = 122/212 (57%), Gaps = 2/212 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++ + R +PVTV+      V   RT +K+GY AVQ+  G    + V+
Sbjct: 7   KGILGTKLGMTQVFDDQNRVVPVTVVQAGPNVVTQIRTPEKDGYSAVQLAFGAIDPRKVN 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V+P++ + E R   D     VG   +   F  G +VDV G + GKGF+G
Sbjct: 67  KPRTGHFTKAGVTPRRHVVELR-TADAGEYEVGQEVTAEVFEAGTVVDVVGTSKGKGFAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G  A+HG    HR  GS G    PGRVFK  +M+GRMG +RVT +NL+V  V
Sbjct: 126 TMKRHGFRGQGASHGTQAVHRKPGSIGGCATPGRVFKGMRMSGRMGSDRVTTQNLKVHRV 185

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           + + GL+L+KG +PG  K   +LV+   K   
Sbjct: 186 EGESGLLLIKGAIPGP-KGGLVLVKSPAKGGA 216


>gi|256827416|ref|YP_003151375.1| 50S ribosomal protein L3P [Cryptobacterium curtum DSM 15641]
 gi|256583559|gb|ACU94693.1| LSU ribosomal protein L3P [Cryptobacterium curtum DSM 15641]
          Length = 206

 Score =  247 bits (632), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 85/209 (40%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M + +   KLGMT +++ +   +PVTV+      +   +T + +GY AVQ+G G  K + 
Sbjct: 1   MINAIYGTKLGMTQIFSEDDEVVPVTVIQAAPNTICQLKTKETDGYEAVQLGFGAIKPQK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++PM G F+   V P + L E RV +D     +G   + S F   + VDVT  + GKGF
Sbjct: 61  VNRPMGGHFAKQGVDPVRHLREVRV-EDASAHSLGEKVTVSLFADAKKVDVTATSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G M+R+NF G    HG    HR+ GS G    P RVFK  ++ G MG + VTVKNL+VV
Sbjct: 120 AGVMRRYNFRGGPGGHGAH-FHRAPGSVGMCATPSRVFKGLRLPGHMGVDTVTVKNLDVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            +D+++ LILVKG VPG  KN+ + VR +
Sbjct: 179 RIDEEQNLILVKGAVPGG-KNAMVRVRLA 206


>gi|282882468|ref|ZP_06291089.1| 50S ribosomal protein L3 [Peptoniphilus lacrimalis 315-B]
 gi|281297610|gb|EFA90085.1| 50S ribosomal protein L3 [Peptoniphilus lacrimalis 315-B]
          Length = 209

 Score =  247 bits (632), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 92/209 (44%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RK+GMT +++ +G   PV+V+ ++   V   +T + +GY A+Q+ AG  K   V+KP
Sbjct: 4   LIGRKIGMTQIFDEKGIVTPVSVIEVEPNIVTQKKTPENDGYSAIQISAGAVKENKVNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
            +G F    VS KK L EF +  D D   +G       F VG+ VDV G + GKG +G +
Sbjct: 64  TKGHFDKAGVSYKKYLSEF-LTDDVDSYNLGDEIKVDIFEVGEHVDVIGTSKGKGTAGII 122

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH FG  R THG S  HR  G  G    PG+VFKN +MAG+MG  RVTV+NLE+V +D 
Sbjct: 123 KRHGFGRGRETHG-SKFHRMPGGMGAASYPGKVFKNHRMAGKMGNERVTVQNLEIVRIDA 181

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            + LILVKG +PG KK S + V+++ K A
Sbjct: 182 SKNLILVKGAIPGNKK-SKVFVKETVKKA 209


>gi|315652354|ref|ZP_07905346.1| 50S ribosomal protein L3 [Eubacterium saburreum DSM 3986]
 gi|315485477|gb|EFU75867.1| 50S ribosomal protein L3 [Eubacterium saburreum DSM 3986]
          Length = 225

 Score =  247 bits (632), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 84/227 (37%), Positives = 119/227 (52%), Gaps = 18/227 (7%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ARK+GMT +++  G  IPVTVL    C V   +T + +GY +VQV  G+ + K 
Sbjct: 1   MKKAILARKVGMTQIFDENGVLIPVTVLLAGPCVVTQVKTEENDGYNSVQVAYGQIRTKL 60

Query: 61  VSKPMRGFFSSVNVS---------------PKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105
           V+K   G  +   +                  + + EF+ +   +  P  +      F  
Sbjct: 61  VNKAKAGHLAKAGIEKTVVEKGDKKREVFTAGRFIREFKFENASEYAP-KAEIKVDIFAA 119

Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
           G  VD T ++ GKGF GA+KRH       +HG S  HR  GS G   DP  VFK K M G
Sbjct: 120 GDKVDATAVSKGKGFQGAIKRHGQSRGPMSHG-SKFHRHQGSNGSSSDPSHVFKGKGMPG 178

Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            MG  RVT +NLE+V VD  R LILVKG +PG+KK + I ++++ K 
Sbjct: 179 HMGAKRVTTQNLEIVRVDADRNLILVKGSMPGSKK-ALITLKETVKK 224


>gi|253701922|ref|YP_003023111.1| 50S ribosomal protein L3 [Geobacter sp. M21]
 gi|259646547|sp|C6E4Q7|RL3_GEOSM RecName: Full=50S ribosomal protein L3
 gi|251776772|gb|ACT19353.1| ribosomal protein L3 [Geobacter sp. M21]
          Length = 211

 Score =  247 bits (632), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 89/212 (41%), Positives = 123/212 (58%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT ++  +GRRI VTV+    C VV  +++ K+GY A+QVG G      
Sbjct: 1   MNKGLIGKKLGMTQIFAEDGRRIAVTVVEAGPCVVVQKKSVAKDGYSAIQVGLGAKDASR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +    G              E R+   D    +G V   + F  G LVDVTG +IGKGF
Sbjct: 61  ANAAQIGHCKGAGAGVFTHYRELRMDNTDA-YNLGDVIEAAVFEEGDLVDVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR  F G R++HG S  HR+ GS GC   P RVFKNKKM G++G  +VTV+ L+VV
Sbjct: 120 AGVIKRWGFKGGRSSHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQLGNEKVTVQRLKVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD    LIL+ G +PG+  N  +L++DS K+
Sbjct: 179 RVDAADNLILLGGAIPGSA-NGVVLIKDSVKA 209


>gi|153214894|ref|ZP_01949692.1| ribosomal protein L3 [Vibrio cholerae 1587]
 gi|124115053|gb|EAY33873.1| ribosomal protein L3 [Vibrio cholerae 1587]
          Length = 184

 Score =  247 bits (632), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 86/184 (46%), Positives = 116/184 (63%), Gaps = 1/184 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   V+
Sbjct: 2   IGLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGSKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR++  ++   VGS  +   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180

Query: 183 DDKR 186
           D +R
Sbjct: 181 DAER 184


>gi|315056921|ref|XP_003177835.1| 54S ribosomal protein L9 [Arthroderma gypseum CBS 118893]
 gi|311339681|gb|EFQ98883.1| 54S ribosomal protein L9 [Arthroderma gypseum CBS 118893]
          Length = 304

 Score =  247 bits (632), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 103/215 (47%), Positives = 144/215 (66%), Gaps = 3/215 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GMT +Y+   G R P TVL LD  QVV H+T +KNGY AVQVG+G    +
Sbjct: 77  LRTGALAIKKGMTAIYDPETGVRTPCTVLQLDGAQVVSHKTFEKNGYCAVQVGSGFKYER 136

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV+KPM G FS+  VSPK+ + EFRV+ +  LLP+G V +  +F  GQ VDV   + G G
Sbjct: 137 NVTKPMLGHFSANGVSPKRHIHEFRVKDEAGLLPIGEVINADWFQEGQYVDVRSNSRGMG 196

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+GAMK+  F G   +HGVS++HRS GST   Q  G RV+  KKM GRMG ++VT+++L+
Sbjct: 197 FAGAMKKWGFHGQDRSHGVSLTHRSLGSTAPSQGGGSRVYPGKKMPGRMGNHQVTLQSLK 256

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V+ VD ++G+++VKG V G K    + ++D+ K  
Sbjct: 257 VLKVDAEKGIVVVKGGVAGPKGRC-VKIQDAIKKP 290


>gi|84515208|ref|ZP_01002571.1| 50S ribosomal protein L3 [Loktanella vestfoldensis SKA53]
 gi|84511367|gb|EAQ07821.1| 50S ribosomal protein L3 [Loktanella vestfoldensis SKA53]
          Length = 272

 Score =  247 bits (632), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 115/202 (56%), Positives = 154/202 (76%), Gaps = 2/202 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT ++  +GR++PVTVL L+N QVV  RT++K+GY+AVQ+GAG AK K  S+ MRG F++
Sbjct: 1   MTRLFMEDGRQVPVTVLALENLQVVAQRTVEKDGYVAVQLGAGAAKAKRTSQAMRGHFAA 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             V PK+K+ EFRV  + +++ VG   + +++  GQ VDV+G +IGKGF+GAMKRHNFGG
Sbjct: 61  AKVEPKRKVAEFRVAPE-NMINVGETITANHYFEGQYVDVSGTSIGKGFAGAMKRHNFGG 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
           LRA+HGVS+SHRSHGSTG  QDPG+VFK KKMAG MG  RVT +NL+VV  D  RGLI+V
Sbjct: 120 LRASHGVSVSHRSHGSTGQCQDPGKVFKGKKMAGHMGSARVTTQNLQVVRTDADRGLIMV 179

Query: 192 KGCVPGAKKNSWILVRDSFKSA 213
           KG VPG+ +  W+ ++D+ K  
Sbjct: 180 KGAVPGS-RGGWVTLKDAVKKP 200


>gi|257784963|ref|YP_003180180.1| 50S ribosomal protein L3 [Atopobium parvulum DSM 20469]
 gi|257473470|gb|ACV51589.1| ribosomal protein L3 [Atopobium parvulum DSM 20469]
          Length = 206

 Score =  247 bits (632), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 90/209 (43%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M + ++ RKLGMT V++     +PVTV+    C V   +T++ +GY AVQ+G G+   K+
Sbjct: 1   MVNTILGRKLGMTQVWDENDNVVPVTVVLAGPCTVSQVKTVETDGYNAVQIGFGDISEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM G F +  V P + L E RV +D      G V + + F+    VDVTG + GKGF
Sbjct: 61  VNKPMAGHFKAQGVEPMRYLREVRV-EDASEHKTGDVVTVADFSEVTTVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NF     THG S + R  GS G    P RV K   M G MG  RVTVKNL++V
Sbjct: 120 QGTVKRWNFSRGPMTHG-SRNQRRPGSIGQCAYPARVRKGLHMYGHMGAERVTVKNLKLV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            VD ++ L+L+KG VPG  KN+ + VR +
Sbjct: 179 RVDAEQNLMLIKGAVPGG-KNALVQVRMA 206


>gi|282898357|ref|ZP_06306348.1| Ribosomal protein L3 [Raphidiopsis brookii D9]
 gi|281196888|gb|EFA71793.1| Ribosomal protein L3 [Raphidiopsis brookii D9]
          Length = 212

 Score =  247 bits (632), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 90/211 (42%), Positives = 126/211 (59%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT +++  G  IPVTV+    C V   +T   +GY A+QVG GE K K 
Sbjct: 1   MSVGILGTKLGMTQIFDEAGVSIPVTVIKAGPCTVTQVKTQPTDGYCAIQVGYGEVKPKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G  +  +  P + L E+R     D   +G       F+VGQ+VDV G +IG+GF
Sbjct: 61  LNQPKLGHLAKSSAGPVRYLNEYRTDAAGD-YALGQEIKADIFSVGQIVDVIGTSIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KR+NFG    +HG S +HR+ GS G    PGRV+  K+MAGR+GG+RVTV+ L VV
Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGSRVTVRKLTVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R LIL+KG +PG      + V  + K
Sbjct: 179 KVDAERNLILIKGAIPGKP-GGLVNVVPTTK 208


>gi|325916487|ref|ZP_08178756.1| LSU ribosomal protein L3P [Xanthomonas vesicatoria ATCC 35937]
 gi|325537276|gb|EGD09003.1| LSU ribosomal protein L3P [Xanthomonas vesicatoria ATCC 35937]
          Length = 216

 Score =  247 bits (632), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 93/210 (44%), Positives = 128/210 (60%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G V RK GM+ V+  +GR +PVT++     ++   +T++ +GY AVQ+  G  +   V+K
Sbjct: 8   GFVGRKAGMSRVFTEDGRSVPVTLIEATPNRIAQIKTVETDGYSAVQITVGARRAALVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P  G F+   V   + L+EFRV+        VG       F VGQ VDV G+T GKGF G
Sbjct: 68  PAAGHFAKAKVEAGRGLWEFRVEDAQLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQG 127

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR+NF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  + + +NLEVV V
Sbjct: 128 TIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVKV 187

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +RGLI ++G VPGA     ++VR + K+
Sbjct: 188 DVERGLIAIRGAVPGAAGGD-VIVRPASKA 216


>gi|281423839|ref|ZP_06254752.1| 50S ribosomal protein L3 [Prevotella oris F0302]
 gi|299141147|ref|ZP_07034284.1| 50S ribosomal protein L3 [Prevotella oris C735]
 gi|281402066|gb|EFB32897.1| 50S ribosomal protein L3 [Prevotella oris F0302]
 gi|298577107|gb|EFI48976.1| 50S ribosomal protein L3 [Prevotella oris C735]
          Length = 204

 Score =  247 bits (632), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 83/205 (40%), Positives = 123/205 (60%), Gaps = 5/205 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T +K+GY A+Q+G  EAK    SK
Sbjct: 3   GLIGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTEEKDGYKALQLGFEEAKENRTSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           PM G F     +PKK L EF+  ++ +   +G   +   F   + VD+ G + GKGF G 
Sbjct: 63  PMMGTFKKAGTTPKKHLAEFKFDEEHN---LGDTITVELFADAKFVDIVGTSKGKGFQGV 119

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  ++THG     R  GS G    P +VFK  +MAG+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLQVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  L+LVKG V G    S +L++
Sbjct: 180 IPEHNLLLVKGSVAGCN-GSTVLIK 203


>gi|239636233|ref|ZP_04677237.1| 50S ribosomal protein L3 [Staphylococcus warneri L37603]
 gi|239598249|gb|EEQ80742.1| 50S ribosomal protein L3 [Staphylococcus warneri L37603]
 gi|330685188|gb|EGG96852.1| 50S ribosomal protein L3 [Staphylococcus epidermidis VCU121]
          Length = 223

 Score =  247 bits (632), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 93/220 (42%), Positives = 122/220 (55%), Gaps = 11/220 (5%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+QVG  + K   
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEAGQNVVLQKKTEEVDGYNAIQVGFEDKKAYK 60

Query: 61  V--------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
                    +KP  G     + +PK+ + EFR    D+   VG   S   F  G ++DVT
Sbjct: 61  KGSKTNKYANKPAEGHAKKADTAPKRFIREFRNVNVDE-YEVGQEVSVDTFETGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH        HG    HR+ GS G   D  RVFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMAHGSH-FHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           TV+NLEVV VD +  +ILVKG VPG KK   + +  S KS
Sbjct: 179 TVQNLEVVQVDTENSVILVKGNVPGPKKG-LVEISTSIKS 217


>gi|171462879|ref|YP_001796992.1| ribosomal protein L3 [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|226730546|sp|B1XSQ1|RL3_POLNS RecName: Full=50S ribosomal protein L3
 gi|171192417|gb|ACB43378.1| ribosomal protein L3 [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 218

 Score =  247 bits (632), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 88/219 (40%), Positives = 125/219 (57%), Gaps = 3/219 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  EG  IPVTV+ + + +V   +T   NGY A+Q+  G  +   
Sbjct: 1   MSLGLIGRKVGMTRLFTDEGEAIPVTVIDVSDNRVAQIKTQATNGYDAIQLAHGTRRATR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSY-FTVGQLVDVTGMTIGK 118
           V+K M G F+   V     L EF +       +  G V      FT GQ VDV G+TIGK
Sbjct: 61  VTKAMAGHFAKAGVMAGNALNEFHLDAAKIAEMTPGQVIPAETAFTAGQKVDVQGVTIGK 120

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           G++G +KR++F   RA+HG S SH   GS G  QDPGRVF  K+M G +G    TV+NL 
Sbjct: 121 GYAGTIKRYHFASGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDITRTVQNLV 180

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           +  +D +R LI+VKG +PGA     ++V  + K+ +  K
Sbjct: 181 IARIDAERNLIMVKGAIPGAPGGK-VIVTPAVKTPLKKK 218


>gi|298207727|ref|YP_003715906.1| 50S ribosomal protein L3 [Croceibacter atlanticus HTCC2559]
 gi|83850364|gb|EAP88232.1| 50S ribosomal protein L3 [Croceibacter atlanticus HTCC2559]
          Length = 205

 Score =  247 bits (632), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 86/206 (41%), Positives = 121/206 (58%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C V   RT + +GY A+Q+G  +   K  S
Sbjct: 2   SGLIGKKIGMTSIFDENGKNIPCTVIQAGPCVVTQVRTSEVDGYKALQLGFDDKADKRAS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
               G F     SPK K+ EF+  +DD    +G   +   F  G+ VDV+G + GKGF G
Sbjct: 62  NAAVGHFKKAGTSPKYKVAEFKKFEDD--FNLGDSVTVEMFKEGEFVDVSGTSKGKGFQG 119

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG  +ATHG     R+ GS G    P RVFK  KMAG+MG  +V V+NL V+ 
Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGQMGNEKVKVQNLRVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V   + LI+VKG VPG  KNS++ ++
Sbjct: 180 VVADKNLIVVKGAVPG-HKNSYVTIQ 204


>gi|15617118|ref|NP_240331.1| 50S ribosomal protein L3 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|11134328|sp|P57591|RL3_BUCAI RecName: Full=50S ribosomal protein L3
 gi|25294942|pir||A84991 50S ribosomal protein L3 [imported] - Buchnera sp. (strain APS)
 gi|10039183|dbj|BAB13217.1| 50S ribosomal protein L3 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 209

 Score =  247 bits (632), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 91/209 (43%), Positives = 133/209 (63%), Gaps = 2/209 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K+GMT ++  EG  IPVTV+ L   ++   + ++ + Y A+QV  G  K   ++
Sbjct: 2   IGLVGKKIGMTRIFTEEGTSIPVTVIELKENRITQVKNINTDLYCAIQVTTGIKKSNRLN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P + L+EFR  K+++   +G   + + F   + VD+TG++ GKGFSG
Sbjct: 62  KPQSGHFLKSGVTPGRGLWEFRTDKNNNF-KIGQSITINIFNNVKKVDITGISKGKGFSG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG++G  RVTV++L +V +
Sbjct: 121 TVKRWNFHTQDATHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGQLGNTRVTVQSLNIVRI 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D+ R L+LVKG VPGA   S ++V+ + K
Sbjct: 181 DEHRNLLLVKGAVPGA-TGSDLIVKPAIK 208


>gi|224477220|ref|YP_002634826.1| 50S ribosomal protein L3 [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254803691|sp|B9DM19|RL3_STACT RecName: Full=50S ribosomal protein L3
 gi|222421827|emb|CAL28641.1| 50S ribosomal protein L3 [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 220

 Score =  247 bits (631), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 87/221 (39%), Positives = 119/221 (53%), Gaps = 11/221 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+QVG  + +   
Sbjct: 1   MTKGILGRKIGMTQVFGENGDLIPVTVVEAGQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60

Query: 61  V--------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
                    +KP  G       +PK+ + EF+   + D   VG   S   F  G ++DVT
Sbjct: 61  KDSKSNKYANKPAEGHAKKAGTAPKRFIREFK-NINVDEYEVGQEVSVDTFEAGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF G +KRH        HG    HR+ GS G   D  +VFK  KM GRMGGN V
Sbjct: 120 GVSKGKGFQGNIKRHGHARGPMAHGSH-FHRAPGSVGMASDASKVFKGHKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           TV+NLEVV +D +  +ILVKG VPG KK   + ++ S K  
Sbjct: 179 TVQNLEVVQIDAENNVILVKGNVPGPKKG-LVEIKTSIKKG 218


>gi|251799642|ref|YP_003014373.1| 50S ribosomal protein L3 [Paenibacillus sp. JDR-2]
 gi|247547268|gb|ACT04287.1| ribosomal protein L3 [Paenibacillus sp. JDR-2]
          Length = 207

 Score =  247 bits (631), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 80/210 (38%), Positives = 113/210 (53%), Gaps = 4/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +KLGMT V+  EG  +PVTV+    C V+  +  + +GY AVQ G  + K     
Sbjct: 2   KGILGKKLGMTQVFTAEGNVVPVTVIEAGPCVVLQKKDQENDGYEAVQFGFSDKKEARAI 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G     N +PK+ + E R     +   VG       F  G+ VDVTG++ GKGF+G
Sbjct: 62  KPEIGHAKKANTAPKRYVREIRGINLGE-YEVGQEVKADLFAEGEFVDVTGISKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR         HG S  HR  GS G  Q   RV K K + G MG   VT++ LE++ V
Sbjct: 121 VIKRWGQSTGPMAHG-SRYHRGPGSMGSIQ-ANRVPKGKHLPGHMGHETVTIQKLEIIRV 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R +ILVKG +PG  KN ++ V+ + K+
Sbjct: 179 DAERNVILVKGSIPGP-KNGFVKVKQTVKN 207


>gi|157964806|ref|YP_001499630.1| 50S ribosomal protein L3 [Rickettsia massiliae MTU5]
 gi|166990939|sp|A8F2E7|RL3_RICM5 RecName: Full=50S ribosomal protein L3
 gi|157844582|gb|ABV85083.1| 50S ribosomal protein L3 [Rickettsia massiliae MTU5]
          Length = 215

 Score =  247 bits (631), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 111/212 (52%), Positives = 163/212 (76%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G  + K+  
Sbjct: 1   MRTGIIAQKVGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+  F++  +SPK KL EFR+ ++   + + +     +FT GQ VD+T  TIGKGF
Sbjct: 61  VTKPMKQVFANAKISPKTKLKEFRISEEH-FIDIATSLEVDHFTAGQFVDITATTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VF+ KKMAG MG N+VT++NL++ 
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFRGKKMAGHMGCNQVTIQNLKIF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +VD +R LI+++G +PG  KNS++ V+D+ K 
Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIKK 210


>gi|327301767|ref|XP_003235576.1| 50S ribosomal protein L3 [Trichophyton rubrum CBS 118892]
 gi|326462928|gb|EGD88381.1| 50S ribosomal protein L3 [Trichophyton rubrum CBS 118892]
          Length = 302

 Score =  247 bits (631), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 101/215 (46%), Positives = 144/215 (66%), Gaps = 3/215 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GMT +Y+   G R P TVL LD  QV+ H+T +KNGY AVQVG+G    +
Sbjct: 75  LRTGALAIKKGMTAIYDPETGVRTPCTVLQLDGAQVISHKTFEKNGYCAVQVGSGLKNER 134

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV++PM G FS+  VSPK+ + EFRV+ +  LLP+G V +  +F  GQ VDV   + G G
Sbjct: 135 NVTRPMLGHFSANGVSPKRHIHEFRVKDETGLLPIGEVINADWFQEGQYVDVRSNSRGMG 194

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+GAMK+  F G   +HGVS++HRS GST   Q  G RV+  KKM GRMG ++VT+++L+
Sbjct: 195 FAGAMKKWGFHGQDRSHGVSLTHRSLGSTAPSQGGGSRVYPGKKMPGRMGNHQVTLQSLK 254

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V+ VD ++G+++VKG V G K    + ++D+ K  
Sbjct: 255 VLKVDAEKGIVVVKGGVAGPKGRC-VKIQDAIKKP 288


>gi|330997365|ref|ZP_08321216.1| 50S ribosomal protein L3 [Paraprevotella xylaniphila YIT 11841]
 gi|329570739|gb|EGG52455.1| 50S ribosomal protein L3 [Paraprevotella xylaniphila YIT 11841]
          Length = 205

 Score =  247 bits (631), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 81/204 (39%), Positives = 120/204 (58%), Gaps = 4/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   ++++K+GY AVQ+G  EAK KN + 
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQLGFQEAKEKNTTA 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F     +PK+ L EF   + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGTTPKRHLAEFTGFEQE--LNLGDTVTVDMFEGTVYVDVIGTSKGKGFQGV 120

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  + THG     R  GS G    P +VFK  +M G+MG  RVT +NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGLRMGGQMGNERVTAQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
             +  L+L+KG VPG  K S +++
Sbjct: 181 IPEHNLLLIKGSVPG-YKGSIVII 203


>gi|312889367|ref|ZP_07748921.1| LSU ribosomal protein L3P [Mucilaginibacter paludis DSM 18603]
 gi|311298244|gb|EFQ75359.1| LSU ribosomal protein L3P [Mucilaginibacter paludis DSM 18603]
          Length = 205

 Score =  247 bits (631), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 90/205 (43%), Positives = 129/205 (62%), Gaps = 4/205 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C V   +++D +GY AVQ+  GE K KN S
Sbjct: 2   SGIIGKKVGMTSIFDEAGKNIPCTVIEAGPCVVTHVKSVDTDGYAAVQLAYGEKKEKNTS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
            P++G F     +PK+KL EF+  +D+    +G V +   F+ G  VDV G + GKGF G
Sbjct: 62  GPLKGHFQKAGTTPKRKLVEFKTFEDE--KSLGDVITVDLFSAGDFVDVVGTSKGKGFQG 119

Query: 123 AMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG+   THG     R+ GS G    P RVFK  +MAG MG +RV V+NL+VV 
Sbjct: 120 VVKRHGFGGVGMQTHGQHNRLRAPGSLGASSWPSRVFKGMRMAGHMGNSRVKVQNLQVVK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           V  ++ LI+VKG +PGA K S+++V
Sbjct: 180 VYPEQNLIVVKGSIPGA-KGSFVIV 203


>gi|115378276|ref|ZP_01465444.1| ribosomal protein L3 [Stigmatella aurantiaca DW4/3-1]
 gi|115364718|gb|EAU63785.1| ribosomal protein L3 [Stigmatella aurantiaca DW4/3-1]
          Length = 259

 Score =  247 bits (631), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 98/221 (44%), Positives = 136/221 (61%), Gaps = 3/221 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GMT V+N EG  +PVTV+ +  CQVV  RT +K+ Y AV +G GE + K ++
Sbjct: 38  KGLIGKKIGMTQVFNDEGNLVPVTVVDVSTCQVVGKRTPEKDQYSAVTLGFGEIREKVLN 97

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +  RGFF   + + ++ L EFRV  +D     VG       FT GQLVDVTG T G+GFS
Sbjct: 98  QAQRGFFKKNSAALRRHLKEFRVTPEDAAQFNVGDAVKADLFTKGQLVDVTGTTKGRGFS 157

Query: 122 GAMKRHNFGGLR-ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           G M+R +F G +  THG     R  G+ G R+ PGR + NKKM G  G  +VT +NL VV
Sbjct: 158 GVMRRWSFKGSQTKTHGTHEYQRHPGAIGQRKTPGRTYPNKKMPGHYGVEQVTTQNLTVV 217

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
            VD ++GL+L+KG VPG   ++ + VR S K A+  + K S
Sbjct: 218 DVDTEKGLLLIKGAVPG-HNDAIVYVRPSVKVALRAQHKAS 257


>gi|300814637|ref|ZP_07094888.1| 50S ribosomal protein L3 [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|300511256|gb|EFK38505.1| 50S ribosomal protein L3 [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 209

 Score =  247 bits (631), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 92/209 (44%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RK+GMT +++ +G   PV+V+ ++   V   +T + +GY A+Q+ AG  K   V+KP
Sbjct: 4   LIGRKIGMTQIFDEKGIVTPVSVIEVEPNIVTQKKTSENDGYSAIQISAGAVKENKVNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
            +G F    VS KK L EF +  D D   +G       F VG+ VDV G + GKG +G +
Sbjct: 64  TKGHFDKAGVSYKKYLSEF-LTDDVDSYNLGDEIKVDIFEVGEHVDVIGTSKGKGTAGII 122

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH FG  R THG S  HR  G  G    PG+VFKN +MAG+MG  RVTV+NLE+V +D 
Sbjct: 123 KRHGFGRGRETHG-SKFHRMPGGMGAASYPGKVFKNHRMAGKMGNERVTVQNLEIVRIDA 181

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            + LILVKG +PG KK S + V+++ K A
Sbjct: 182 SKNLILVKGAIPGNKK-SKVFVKETVKKA 209


>gi|145588242|ref|YP_001154839.1| ribosomal protein L3 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189042856|sp|A4SUW1|RL3_POLSQ RecName: Full=50S ribosomal protein L3
 gi|145046648|gb|ABP33275.1| LSU ribosomal protein L3P [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 218

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 85/219 (38%), Positives = 126/219 (57%), Gaps = 3/219 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  EG  IPVTV+ + + ++   +T   +GY A+Q+  G  +   
Sbjct: 1   MSLGLIGRKVGMTRLFTDEGDSIPVTVIDVSDNRIAQIKTQATDGYDAIQLAHGTRRATR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSY-FTVGQLVDVTGMTIGK 118
           V+K M G F+   V     L EF++       +  G V      FT GQ VDV G++IGK
Sbjct: 61  VTKAMAGHFAKAGVMAGNGLNEFQLDAAKIAEMTPGQVIPADTAFTAGQKVDVQGVSIGK 120

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           G++G +KR++F   RA+HG S SH   GS G  QDPGRVF  K+M G +G    TV+NL 
Sbjct: 121 GYAGTIKRYHFASGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTRTVQNLV 180

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           +  +D +R LI+VKG +PGA     ++V  + K+ +  K
Sbjct: 181 IARIDAERNLIMVKGAIPGAPGGK-VIVTPAVKTPLKKK 218


>gi|330718972|ref|ZP_08313572.1| 50S ribosomal protein L3 [Leuconostoc fallax KCTC 3537]
          Length = 226

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 80/220 (36%), Positives = 115/220 (52%), Gaps = 8/220 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  I VT +      V+  +  + +GY AVQ+G  + +   
Sbjct: 1   MTKGILGRKVGMTQVFTETGELIAVTAVEATPNVVLQLKNAETDGYSAVQLGYQDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G     N +PK+ + E  ++  +    VG       F  G  VDVTG+T G GF
Sbjct: 61  SNKPEQGHAKKANTTPKRYIRE--IRDAEGEFNVGDEIKVDTFQAGDYVDVTGITKGHGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR         HG S  HR  GS G      RVFK K + GRMG N+ T++N+ +V
Sbjct: 119 QGAIKRLGQSRGPMAHG-SRYHRRPGSMGAI--INRVFKGKLLPGRMGNNKRTMQNVAIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
            VD +  L+L+KG VPGA K S + ++ + K  VN K   
Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTIKSTVK--VNAKHPA 212


>gi|242371896|ref|ZP_04817470.1| 50S ribosomal protein L3 [Staphylococcus epidermidis M23864:W1]
 gi|242350403|gb|EES42004.1| 50S ribosomal protein L3 [Staphylococcus epidermidis M23864:W1]
          Length = 220

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 93/221 (42%), Positives = 121/221 (54%), Gaps = 11/221 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+QVG        
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60

Query: 54  -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
            G    K  +KP  G     + +PK+ + EFR    D+   VG   S   F  G ++DVT
Sbjct: 61  KGSKSNKYANKPAEGHAKKADTAPKRFIREFRNVNVDE-YEVGQEVSVDTFETGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH        HG    HR+ GS G   D  RVFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMAHGSH-FHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           TV+NLEVV VD +  +ILVKG VPG KK   + +  S K  
Sbjct: 179 TVQNLEVVQVDTENSVILVKGNVPGPKKG-LVEITTSIKKG 218


>gi|239948319|ref|ZP_04700072.1| 50S ribosomal protein L3 [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239922595|gb|EER22619.1| 50S ribosomal protein L3 [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 215

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 113/212 (53%), Positives = 165/212 (77%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G  + K+  
Sbjct: 1   MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V KPM+  F++  +SPK KL EFR+ ++ + + + +     +FT GQ VD+T +TIGKGF
Sbjct: 61  VIKPMKQVFANAKISPKTKLKEFRISEE-NFIDIAASLEVDHFTAGQFVDITAITIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ 
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +VD +R LI+++G +PG  KNS++LV+D+ K 
Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLLVKDAIKK 210


>gi|218885187|ref|YP_002434508.1| 50S ribosomal protein L3 [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|226725164|sp|B8DN96|RL3_DESVM RecName: Full=50S ribosomal protein L3
 gi|218756141|gb|ACL07040.1| ribosomal protein L3 [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 209

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 92/206 (44%), Positives = 123/206 (59%), Gaps = 2/206 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           + G++ RK+GMT ++  +G  + VTV+    C V+  R  + +GY AVQ+   EAK K+V
Sbjct: 4   KLGILGRKVGMTRIFASDGSAVAVTVIQAGPCPVIQVRNGETDGYDAVQIAFEEAKEKHV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP RG F+       + L E R++   +   VG   + S F  G+ V VTG +IGKG+ 
Sbjct: 64  TKPARGHFAKAGKGLFRNLREIRLEAPAEF-EVGQELTVSLFAAGEKVKVTGTSIGKGYQ 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G M+R NF G + THG    HRS GS G    PG VFK KKMAG  G  RVTVKNLE+V 
Sbjct: 123 GVMRRWNFAGSKDTHGCEKVHRSGGSIGNNTFPGHVFKGKKMAGHWGDERVTVKNLEIVD 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           +  +  +ILVKG VPG  KN  +LVR
Sbjct: 183 IRAEDNVILVKGAVPGP-KNGLVLVR 207


>gi|71065059|ref|YP_263786.1| 50S ribosomal protein L3 [Psychrobacter arcticus 273-4]
 gi|109893542|sp|Q4FUF6|RL3_PSYA2 RecName: Full=50S ribosomal protein L3
 gi|71038044|gb|AAZ18352.1| LSU ribosomal protein L3P [Psychrobacter arcticus 273-4]
          Length = 212

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 95/213 (44%), Positives = 133/213 (62%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V +K GMT V+   G  IPVTV+ +   ++   +  D +GY A+QV  G  +   
Sbjct: 1   MAIGLVGKKCGMTRVFTEAGASIPVTVVEISANRITQVKNTDVDGYQAIQVTTGTRRDSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFR-VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + ++EFR    D +   +G       F  GQ+VDVTG + GKG
Sbjct: 61  VTAAQKGHFAKAGVAAGRGVWEFRANDSDLEGREIGGEILADLFEQGQMVDVTGSSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KRHNF    ATHG S+SHR+HGSTG  Q PG+VFK KKMAG+MG  RVTV+ LEV
Sbjct: 121 FQGPVKRHNFSMQDATHGNSVSHRAHGSTGQNQSPGKVFKGKKMAGQMGNKRVTVQGLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +SVD ++GL+++KG +PGA     ++VR S K+
Sbjct: 181 ISVDAEKGLLVIKGAIPGATGGD-VIVRPSVKA 212


>gi|291001533|ref|XP_002683333.1| 50S ribosomal protein L3 [Naegleria gruberi]
 gi|284096962|gb|EFC50589.1| 50S ribosomal protein L3 [Naegleria gruberi]
          Length = 449

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 93/216 (43%), Positives = 132/216 (61%), Gaps = 4/216 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+GV+A+KLGM   ++    R+P+TVLH+  CQVV  +T +K+GY A+Q+GAG    K 
Sbjct: 142 VRTGVIAQKLGMIPFWDSYHARVPLTVLHIPKCQVVQVKTKEKDGYTALQLGAGSMSAKK 201

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+ G      V PK    E +V +D  +LPVG   +  +F  GQ +D++G + GK F
Sbjct: 202 LTKPLLGHCQKAGVEPKHVYTEAKVTED-AILPVGFEITARHFIPGQFIDISGRSKGKRF 260

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR  F G  ATHGVS+ HRS GSTG      +VFK KKMAGRMG  ++T  N  V 
Sbjct: 261 AGPMKRWGFAGQPATHGVSVVHRSLGSTGTM--INKVFKGKKMAGRMGHEQITQLNYYVY 318

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            VD +   I VKG VPG    +++ + D+ +  + C
Sbjct: 319 MVDVENNCIYVKGSVPGPN-GAYLYLNDASRKDLPC 353


>gi|241895187|ref|ZP_04782483.1| 50S ribosomal protein L3 [Weissella paramesenteroides ATCC 33313]
 gi|241871493|gb|EER75244.1| 50S ribosomal protein L3 [Weissella paramesenteroides ATCC 33313]
          Length = 208

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 6/211 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
             G++ RK+GMT V+   G  IPVTV+      V+  +TL+ +GY A+Q+G  + +    
Sbjct: 3   TKGILGRKVGMTQVFTETGELIPVTVIEATPNVVLQVKTLENDGYSALQLGYQDKRQVLS 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP +G  +  N +PK+ + E  ++  +    VG       F  G+ VDVTG+T G G+ 
Sbjct: 63  NKPEQGHVAKANTTPKRYIRE--IRDAEGEFNVGDEVKVDIFAAGEAVDVTGITKGHGYQ 120

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +K+         HG S  HR  GS G      RVFK KK+ GRMG ++ TV+NL+VV 
Sbjct: 121 GNIKKDGQARGPMAHG-SRYHRRPGSLGAI--INRVFKGKKLPGRMGNHKRTVQNLQVVR 177

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VD +  +ILVKG VPGA K S + V+ S K+
Sbjct: 178 VDVENNVILVKGNVPGANK-SLVTVKYSKKA 207


>gi|15604505|ref|NP_221023.1| 50S ribosomal protein L3 [Rickettsia prowazekii str. Madrid E]
 gi|6226691|sp|P48952|RL3_RICPR RecName: Full=50S ribosomal protein L3
 gi|3861199|emb|CAA15099.1| 50S RIBOSOMAL PROTEIN L3 (rplC) [Rickettsia prowazekii]
 gi|292572287|gb|ADE30202.1| 50S ribosomal protein L3 [Rickettsia prowazekii Rp22]
          Length = 216

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 115/214 (53%), Positives = 165/214 (77%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL K+GY A+ +G  + K+  
Sbjct: 1   MRTGIIAQKVGMTSVFNDKGERISLTLVKVDDCQVVGHKTLAKHGYNALVIGVKDQKISK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+  F++  ++PK KL EFR+ +D + + + S+    +F VGQ VD+T  TIGKGF
Sbjct: 61  VTKPMKQVFANAKIAPKTKLKEFRISED-NFIDIASILEVDHFRVGQFVDITATTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ 
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNKVTIQNLKIF 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           +VD  R LI+++G +PG  KNS++LV+D+ K A 
Sbjct: 180 AVDTNRKLIMIQGSIPG-HKNSYLLVKDAIKKAA 212


>gi|319789238|ref|YP_004150871.1| 50S ribosomal protein L3 [Thermovibrio ammonificans HB-1]
 gi|317113740|gb|ADU96230.1| 50S ribosomal protein L3 [Thermovibrio ammonificans HB-1]
          Length = 207

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 85/207 (41%), Positives = 119/207 (57%), Gaps = 5/207 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--VKN 60
            G++ RK+GMT V+  +G+ I VTV+    C VV  +T +++GY A+Q+G  E       
Sbjct: 2   KGILGRKVGMTQVFTEDGKAIAVTVIEAGPCTVVQKKTPERDGYSALQLGFIEKNKAESK 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
             KP+ G F    + P + L E +     +   VG   +   F  G+ VDVTG + G+GF
Sbjct: 62  FPKPLLGHFKKAGIKPTRWLKEVKFDN-VEEYAVGDKITVDIFKPGEKVDVTGTSKGRGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH FGG R +HG S  H   GS G   DPGRV K K+MAG  G   VTVKNLE+V
Sbjct: 121 AGYHKRHGFGGGRRSHG-SDFHEGPGSIGACADPGRVHKGKRMAGHYGNETVTVKNLEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207
            V  ++ L+L+KG +PG  K S ++V+
Sbjct: 180 DVIPEKNLLLIKGAIPG-HKGSLVIVK 205


>gi|78185522|ref|YP_377956.1| 50S ribosomal protein L3 [Synechococcus sp. CC9902]
 gi|109893566|sp|Q3AUW3|RL3_SYNS9 RecName: Full=50S ribosomal protein L3
 gi|78169816|gb|ABB26913.1| LSU ribosomal protein L3P [Synechococcus sp. CC9902]
          Length = 218

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 81/219 (36%), Positives = 128/219 (58%), Gaps = 4/219 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +GR +PVT++    C++   +  D +GY AVQ+G GE + K 
Sbjct: 1   MSIGILGKKLGMSQLFDEQGRAVPVTLIEAGPCRITQLKNDDTDGYAAVQIGFGETREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G  +       + L E+RV   D  L +G   + S F  GQ VDV+G T+G+GF
Sbjct: 61  INKPSKGHLTKSGEDLLRHLREYRVDNVDG-LELGGSITVSDFEAGQKVDVSGDTMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     THG S +HR  GS G    PGR++  K+M+GR GG + T + L ++
Sbjct: 120 AGLQKRHGFSRGPMTHG-SKNHRQPGSIGAGTTPGRIYPGKRMSGRYGGKKTTTRGLTIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK-SAVNCKG 218
            +D  R L++VKG VPG    + + ++ + +  A   KG
Sbjct: 179 RIDSDRNLLVVKGSVPGKP-GALLNIKPAVRVGAKPAKG 216


>gi|167764372|ref|ZP_02436497.1| hypothetical protein BACSTE_02756 [Bacteroides stercoris ATCC
           43183]
 gi|167697777|gb|EDS14356.1| hypothetical protein BACSTE_02756 [Bacteroides stercoris ATCC
           43183]
          Length = 205

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 84/204 (41%), Positives = 125/204 (61%), Gaps = 4/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EG+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYQAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PKK L EF+  + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFEGADYVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  + THG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
             +  L+L+KG VPG  K S +++
Sbjct: 181 IAEHNLLLIKGSVPGC-KGSIVII 203


>gi|317125872|ref|YP_004099984.1| 50S ribosomal protein L3P [Intrasporangium calvum DSM 43043]
 gi|315589960|gb|ADU49257.1| LSU ribosomal protein L3P [Intrasporangium calvum DSM 43043]
          Length = 221

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 86/202 (42%), Positives = 119/202 (58%), Gaps = 2/202 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V++ + R +PVTV+    C V   R    +GY AVQ+  G    + V++PM G F  
Sbjct: 22  MTQVWDADNRLVPVTVVEAGPCVVTQVRNGATDGYDAVQIAFGAIDPRKVNQPMSGHFEK 81

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             V+P++ L E R   D     +G   S   F  GQ VD TG T GKGF+G MKRH F G
Sbjct: 82  AGVTPRRHLVELR-TADAADYELGQEISADVFEAGQRVDATGTTKGKGFAGVMKRHGFAG 140

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
           + ++HG   +HR  GS G    PGRVF+  +MAGRMGG R T +NL++ +VD ++GL+L+
Sbjct: 141 VSSSHGSHRNHRKPGSIGGCATPGRVFRGMRMAGRMGGVRQTTQNLQIHAVDAEKGLLLI 200

Query: 192 KGCVPGAKKNSWILVRDSFKSA 213
           KG VPG  +   +L+R + K A
Sbjct: 201 KGAVPGP-RGGIVLIRTAAKGA 221


>gi|149279664|ref|ZP_01885793.1| 50S ribosomal protein L3 [Pedobacter sp. BAL39]
 gi|149229700|gb|EDM35090.1| 50S ribosomal protein L3 [Pedobacter sp. BAL39]
          Length = 205

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 88/205 (42%), Positives = 132/205 (64%), Gaps = 4/205 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++ +G+ IP TV+    C V   +T +K+GY++VQ+G  EAK KN +
Sbjct: 2   SGIIGKKVGMTSIFDADGKNIPCTVIEAGPCVVTQVKTEEKDGYVSVQLGFDEAKEKNTT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +P++G F+  N +PK+KL EF     ++ L +G+  +   F  G  VDV G + GKGF G
Sbjct: 62  QPLKGHFAKANTTPKRKLVEF--DPFEEPLELGATVTVDIFNEGDFVDVVGTSKGKGFQG 119

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG    THG     R+ GS G    P RVFK  +MAGRMGG+RV ++NL+V+ 
Sbjct: 120 VVKRHGFGGVGGQTHGQHNRMRAPGSLGAASYPARVFKGMRMAGRMGGDRVKIQNLQVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           V   + L++V G VPGA K S++++
Sbjct: 180 VYADKNLVVVSGSVPGA-KGSYVIL 203


>gi|159028206|emb|CAO89813.1| rplC [Microcystis aeruginosa PCC 7806]
          Length = 212

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT +++   G  IPVTV+    C V   +T   +GY ++QVG    K K
Sbjct: 1   MSIGILGTKLGMTQIFDNKTGVAIPVTVVQAGPCPVTQVKTKKTDGYESIQVGYKTVKEK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++KP+ G  +   VSP + L E+R+ +D     +G   + + F  G LVDV G TIG+G
Sbjct: 61  ALNKPLLGHLAKAGVSPLRHLIEYRL-EDASAYTLGQEITAAIFQEGDLVDVAGTTIGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG  KRHNF     THG S +HR  GSTG    PGRVF  K+MAG+ G  +VT++ L V
Sbjct: 120 FSGYQKRHNFKRGNMTHG-SKNHRLPGSTGAGTTPGRVFPGKRMAGQYGSTQVTIRKLSV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V +D +R LIL+KG VPG    + + +  + K
Sbjct: 179 VKIDSERNLILIKGAVPGKP-GTLLNITPAKK 209


>gi|89902555|ref|YP_525026.1| 50S ribosomal protein L3 [Rhodoferax ferrireducens T118]
 gi|109893546|sp|Q21RV8|RL3_RHOFD RecName: Full=50S ribosomal protein L3
 gi|89347292|gb|ABD71495.1| LSU ribosomal protein L3P [Rhodoferax ferrireducens T118]
          Length = 228

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 88/214 (41%), Positives = 127/214 (59%), Gaps = 3/214 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  EG  IPVTV+ + N +V   +T + +GY+A+QV  G  K   V+K
Sbjct: 8   GLLGRKVGMMRLFTDEGDSIPVTVVDVSNNRVTQVKTQENDGYVALQVTFGARKASRVTK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121
           P  G  +   V   + + EFR+  D       G+     + F VGQ VDV G TIGKGF+
Sbjct: 68  PAAGHLAKAGVEAGEIIREFRLTADVAAQYKAGATVPVTAVFAVGQKVDVQGTTIGKGFA 127

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRH+    RA+HG S SH   GS G  QDPGRVF  K+M G +G + VT +NL+V+ 
Sbjct: 128 GTIKRHHMKSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDDTVTTQNLDVIR 187

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           +D+ R L+++KG VPG+    ++ VR + K   N
Sbjct: 188 IDEARQLLMIKGAVPGSA-GGFVTVRPAVKVKAN 220


>gi|302869972|ref|YP_003838609.1| 50S ribosomal protein L3 [Micromonospora aurantiaca ATCC 27029]
 gi|315501433|ref|YP_004080320.1| 50S ribosomal protein l3 [Micromonospora sp. L5]
 gi|302572831|gb|ADL49033.1| 50S ribosomal protein L3 [Micromonospora aurantiaca ATCC 27029]
 gi|315408052|gb|ADU06169.1| 50S ribosomal protein L3 [Micromonospora sp. L5]
          Length = 221

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 96/218 (44%), Positives = 132/218 (60%), Gaps = 3/218 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   + +PVTV+    C V   R+ DK+GY AVQ+  G    + V 
Sbjct: 6   KGILGAKLGMTQVWD-NNKVVPVTVVQAGPCVVSQVRSADKDGYSAVQLAYGVIDPRKVK 64

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G ++  +V+P++ + E R     D  P G   +   F  G ++DVTG T GKG++G
Sbjct: 65  KPIAGHYAKADVAPRRHIVELRTSDAADYAP-GQEVTVEEFPAGVVIDVTGKTKGKGYAG 123

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F GLRA+HGV   HRS GS G    PGRVFK  +MAGRMGG R TV+NL V +V
Sbjct: 124 PMKRHGFHGLRASHGVERKHRSPGSIGACATPGRVFKGTRMAGRMGGVRYTVQNLTVQAV 183

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
           D +  L+LV+G +PG  K + +LVR + K+ V   G  
Sbjct: 184 DTENNLLLVRGAIPGP-KGALVLVRTAAKAKVKKGGAA 220


>gi|199598832|ref|ZP_03212243.1| Ribosomal protein L3 [Lactobacillus rhamnosus HN001]
 gi|199590244|gb|EDY98339.1| Ribosomal protein L3 [Lactobacillus rhamnosus HN001]
          Length = 210

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 77/212 (36%), Positives = 119/212 (56%), Gaps = 5/212 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ +K+GMT V+   G  +PVTV+ +    V+  +T++ +GY AVQ+G G+ +    
Sbjct: 3   RKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQVKTVESDGYEAVQLGYGDLREVLT 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G     + +PK+ + E R         VGS      F  G +VDVTG + G G+ 
Sbjct: 63  NKPSVGHAKKADTTPKRFVREIR-DVALSDYEVGSEVKADEFAAGDIVDVTGTSKGHGYQ 121

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +K+         HG S  HR  GS G      +VFK KK+ GRMG +  T++NL+VV+
Sbjct: 122 GNIKKDGQSRGPMAHG-SRYHRRPGSLGAI--INKVFKGKKLPGRMGNHTRTMQNLQVVA 178

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D +  ++L+KG VPGA K S++ +R + K+A
Sbjct: 179 ADTEHNVLLIKGNVPGANK-SFVTIRSAVKAA 209


>gi|319952196|ref|YP_004163463.1| lsu ribosomal protein l3p [Cellulophaga algicola DSM 14237]
 gi|319420856|gb|ADV47965.1| LSU ribosomal protein L3P [Cellulophaga algicola DSM 14237]
          Length = 205

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 86/205 (41%), Positives = 124/205 (60%), Gaps = 4/205 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+ L  C V   RT + +GY A+Q+G  +   K  +
Sbjct: 2   SGLIGKKVGMTSIFDENGKNIPCTVIELGPCVVTQVRTEEVDGYSALQLGFDDKAEKRAN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F    VSPKKK+ EFR    +    +G       F  G+ VD  G++ GKGF G
Sbjct: 62  KAETGHFKKAGVSPKKKVVEFR--DFEGGYKLGDTIGVDLFVEGEFVDAIGISKGKGFQG 119

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH F G  +ATHG     R+ GS G    P RVFK  KMAGRMG ++VTV+NL+V+ 
Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSVGAASYPARVFKGMKMAGRMGTDKVTVQNLKVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           V  ++ L+++KGCVPG  KN+++ +
Sbjct: 180 VVPEKNLLVLKGCVPG-HKNAYVTI 203


>gi|254569692|ref|XP_002491956.1| Mitochondrial ribosomal protein of the large subunit [Pichia
           pastoris GS115]
 gi|238031753|emb|CAY69676.1| Mitochondrial ribosomal protein of the large subunit [Pichia
           pastoris GS115]
 gi|328351549|emb|CCA37948.1| 50S ribosomal protein L3 [Pichia pastoris CBS 7435]
          Length = 262

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 107/211 (50%), Positives = 145/211 (68%), Gaps = 2/211 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  K GM   Y  EG RIP TVL +D  +V  ++T+  +GY AVQVG G  K+KN 
Sbjct: 52  RPGLIGVKRGMVPFYTNEGLRIPCTVLEIDQVEVTHNKTVANDGYSAVQVGYGF-KLKNQ 110

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +K M G F+   VSPK+K+ EF V+ DD LLPVG++    +F VG+ VD+  ++ GKGF+
Sbjct: 111 TKKMLGHFAKAQVSPKEKVVEFHVKSDDGLLPVGTLLKADHFKVGEFVDLQSISKGKGFA 170

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR NF GL+A+HGVS +HRS GSTG  Q PGR    KKMAGRMGG+ VT++N+EVV 
Sbjct: 171 GVMKRWNFHGLKASHGVSKAHRSAGSTGGNQTPGRTLPGKKMAGRMGGHNVTLQNVEVVD 230

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V+ ++G IL+KG V GA   S++ ++D+ K 
Sbjct: 231 VNAEKGYILIKGPVSGA-TGSYVKIQDAIKR 260


>gi|255690003|ref|ZP_05413678.1| 50S ribosomal protein L3 [Bacteroides finegoldii DSM 17565]
 gi|260624611|gb|EEX47482.1| 50S ribosomal protein L3 [Bacteroides finegoldii DSM 17565]
          Length = 205

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 83/204 (40%), Positives = 124/204 (60%), Gaps = 4/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYEAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PK+ L EF+  + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKRHLAEFK--EFETELNLGDTVTVEMFNDANFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  + THG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
                L+LVKG +PG  K S +L+
Sbjct: 181 IADHNLLLVKGSIPGC-KGSIVLI 203


>gi|329962267|ref|ZP_08300273.1| 50S ribosomal protein L3 [Bacteroides fluxus YIT 12057]
 gi|328530375|gb|EGF57252.1| 50S ribosomal protein L3 [Bacteroides fluxus YIT 12057]
          Length = 205

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 84/204 (41%), Positives = 125/204 (61%), Gaps = 4/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EG+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYEAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PKK L EF+  + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFNDAAFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  + THG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
             +  L+L+KG VPG  K S +++
Sbjct: 181 IAEHNLLLIKGSVPGC-KGSIVII 203


>gi|260905721|ref|ZP_05914043.1| 50S ribosomal protein L3 [Brevibacterium linens BL2]
          Length = 224

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 85/209 (40%), Positives = 117/209 (55%), Gaps = 2/209 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++ +   +PVTV+   +  V   R  + +GY AVQ+  GE   + V+
Sbjct: 16  KGLLGTKLGMTQVWDEQNNLVPVTVVAAGSNVVTQVRNEETDGYPAVQIAFGEIDPRKVN 75

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V+P++ L E R   D     +G       F  G  VDVT  T GKG +G
Sbjct: 76  KPTAGHFEKAGVTPRRHLVELR-TADAADYSLGQELGVDTFDAGIKVDVTAKTKGKGTAG 134

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    PGRVFK  +MAGRMG  + T +NL + +V
Sbjct: 135 VMKRHGFHGVGASHGQHRNHRKPGSIGGAATPGRVFKGMRMAGRMGAVKHTTQNLTIHAV 194

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D +   +L+KG VPG  K + +LVR + K
Sbjct: 195 DTENNFLLIKGAVPGP-KGAVVLVRSAAK 222


>gi|229552708|ref|ZP_04441433.1| ribosomal protein L3 [Lactobacillus rhamnosus LMS2-1]
 gi|258509482|ref|YP_003172233.1| 50S ribosomal protein L3 [Lactobacillus rhamnosus GG]
 gi|258540679|ref|YP_003175178.1| 50S ribosomal protein L3 [Lactobacillus rhamnosus Lc 705]
 gi|229313914|gb|EEN79887.1| ribosomal protein L3 [Lactobacillus rhamnosus LMS2-1]
 gi|257149409|emb|CAR88382.1| LSU/50S ribosomal protein L3P [Lactobacillus rhamnosus GG]
 gi|257152355|emb|CAR91327.1| LSU/50S ribosomal protein L3P [Lactobacillus rhamnosus Lc 705]
 gi|259650761|dbj|BAI42923.1| 50S ribosomal protein L3 [Lactobacillus rhamnosus GG]
          Length = 210

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 77/212 (36%), Positives = 119/212 (56%), Gaps = 5/212 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ +K+GMT V+   G  +PVTV+ +    V+  +T++ +GY AVQ+G G+ +    
Sbjct: 3   RKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQVKTVESDGYEAVQLGYGDMREVLT 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G     + +PK+ + E R         VGS      F  G +VDVTG + G G+ 
Sbjct: 63  NKPSVGHAKKADTTPKRFVREIR-DVALSDYEVGSEVKADEFAAGDIVDVTGTSKGHGYQ 121

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +K+         HG S  HR  GS G      +VFK KK+ GRMG +  T++NL+VV+
Sbjct: 122 GNIKKDGQSRGPMAHG-SRYHRRPGSLGAI--INKVFKGKKLPGRMGNHTRTMQNLQVVA 178

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D +  ++L+KG VPGA K S++ +R + K+A
Sbjct: 179 ADTEHNVLLIKGNVPGANK-SFVTIRSAVKAA 209


>gi|121706456|ref|XP_001271490.1| 50S ribosomal protein L3 [Aspergillus clavatus NRRL 1]
 gi|119399638|gb|EAW10064.1| 50S ribosomal protein L3 [Aspergillus clavatus NRRL 1]
          Length = 297

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 99/215 (46%), Positives = 140/215 (65%), Gaps = 3/215 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GMT VY+   G+RI  TVL LD  QVV H+T  ++GY AVQ+GAG     
Sbjct: 72  LRTGAIAIKKGMTAVYDTETGKRIACTVLQLDRVQVVSHKTRQRHGYYAVQLGAGWKHPS 131

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV+K + G FS+  VSPK+ ++EFR++ +  L+PVG + + S+F  GQ VD    + GKG
Sbjct: 132 NVTKSLLGHFSTHGVSPKRHIYEFRIKDESGLVPVGEMINASWFQEGQYVDARSNSKGKG 191

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKRH F G   +HGVS++HRS GS G  Q  G RV+  KKMAG MG  + TV+NL+
Sbjct: 192 FAGVMKRHGFHGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLK 251

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           ++ VD + G+++V G V G  K   + ++D+ K  
Sbjct: 252 ILKVDPENGIVVVNGSVSGP-KGCVVRIQDAIKKP 285


>gi|160888399|ref|ZP_02069402.1| hypothetical protein BACUNI_00812 [Bacteroides uniformis ATCC 8492]
 gi|270294752|ref|ZP_06200953.1| 50S ribosomal protein L3 [Bacteroides sp. D20]
 gi|317477751|ref|ZP_07936944.1| 50S ribosomal protein L3 [Bacteroides sp. 4_1_36]
 gi|156862076|gb|EDO55507.1| hypothetical protein BACUNI_00812 [Bacteroides uniformis ATCC 8492]
 gi|270273999|gb|EFA19860.1| 50S ribosomal protein L3 [Bacteroides sp. D20]
 gi|316906096|gb|EFV27857.1| 50S ribosomal protein L3 [Bacteroides sp. 4_1_36]
          Length = 205

 Score =  246 bits (629), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 84/204 (41%), Positives = 125/204 (61%), Gaps = 4/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EG+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYEAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PKK L EF+  + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFNDATFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  + THG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
             +  L+L+KG VPG  K S +++
Sbjct: 181 IAEHNLLLIKGSVPGC-KGSIVII 203


>gi|50285271|ref|XP_445064.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524367|emb|CAG57964.1| unnamed protein product [Candida glabrata]
          Length = 263

 Score =  246 bits (629), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 100/212 (47%), Positives = 145/212 (68%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           R G V +K+GM   ++ + G RI  T+L  +N +V++HR LD++GY+A QVG G   V  
Sbjct: 50  RCGAVTQKVGMMPYFDEKTGERIAATILQFNNVEVLMHRRLDEDGYVACQVGYGNRSVDK 109

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS+ M G F+++NV+PK+K+ EFRV+ ++ LLP+G+   P +FT GQ +DV  ++ GKGF
Sbjct: 110 VSRQMLGHFATLNVNPKEKVTEFRVKNEEGLLPIGTHIKPDFFTEGQYLDVRSVSKGKGF 169

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNF GLRA+HG S+ HR  GS G  QDPGRV   KKM G MG   VTV+N++++
Sbjct: 170 AGVMKRHNFKGLRASHGTSVMHRHGGSYGQNQDPGRVLPGKKMPGHMGVQNVTVQNVKIL 229

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD+   +I VKG VPG    +++ ++D+ K 
Sbjct: 230 KVDEANNVIWVKGAVPGPN-GTYVKIQDAIKK 260


>gi|307694152|ref|ZP_07636389.1| 50S ribosomal protein L3 [Ruminococcaceae bacterium D16]
          Length = 241

 Score =  246 bits (629), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 82/221 (37%), Positives = 120/221 (54%), Gaps = 3/221 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ +K+GMT +++  G  +PVTV+    C VV  +T +K+GY A+Q+G      + 
Sbjct: 1   MEKAIIGKKIGMTQIFDEAGHVVPVTVIEAGPCTVVQKKTAEKDGYEAIQLGYQTVPERK 60

Query: 61  VSKPMRGFFSSVNV-SPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           ++KP  G      +   KK L EFR+  D     +G       F  G  VDVTG++ G G
Sbjct: 61  LTKPEVGHQKKAGLEELKKVLKEFRLD-DCSKYEIGDELKADVFAAGDRVDVTGISKGHG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           + G +KRH    L+ THG    HR  G+     DP R+FK K  AG+MG  +VTV NL+V
Sbjct: 120 YQGVIKRHGASRLKETHGTGPVHRHAGAMAANSDPSRIFKGKIGAGQMGNEQVTVMNLDV 179

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
           +SVD + G+I V+G +PG  K   + +R+S K     KG  
Sbjct: 180 ISVDAELGIIAVRGAIPGP-KGGVVFLRNSVKKYFEPKGAA 219


>gi|312200020|ref|YP_004020081.1| 50S ribosomal protein L3 [Frankia sp. EuI1c]
 gi|311231356|gb|ADP84211.1| 50S ribosomal protein L3 [Frankia sp. EuI1c]
          Length = 232

 Score =  246 bits (629), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 96/213 (45%), Positives = 124/213 (58%), Gaps = 2/213 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++ + R +P+TV+      V   +T D +GY AVQ+G GE   +  +K
Sbjct: 8   GLLGTKLGMTQVWDAQNRVVPITVIQAGPNVVTQVKTPDNDGYAAVQLGYGEIDPRKTNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P RG F++  V+P++ L E R   D      G     S F  G +VDVTG + GKGF+G 
Sbjct: 68  PTRGHFAAAGVTPRRHLAELR-TADAGNYSAGLQLDGSVFDAGTVVDVTGTSKGKGFAGV 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GL A HGV   HRS GS G    PGRVFK  +MAGRMG  RVTV  L V +VD
Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGNVRVTVAGLTVHAVD 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            +RGL+L+KG VPG      + VR + K     
Sbjct: 187 AERGLLLIKGAVPGVD-GGLVFVRSAAKRPAPA 218


>gi|326203896|ref|ZP_08193758.1| 50S ribosomal protein L3 [Clostridium papyrosolvens DSM 2782]
 gi|325985994|gb|EGD46828.1| 50S ribosomal protein L3 [Clostridium papyrosolvens DSM 2782]
          Length = 212

 Score =  246 bits (629), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 87/214 (40%), Positives = 126/214 (58%), Gaps = 4/214 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT +++  G  IPVTV+      VV  +T++ +GY A++VG  +   K 
Sbjct: 1   MKKAMLGKKIGMTQIFDENGLVIPVTVVEAGPLTVVQKKTVETDGYNALKVGYQKVAEKK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119
           +SKP  G FS   ++P K L EFR+ +D     VG        F  G  +DV+G++ GKG
Sbjct: 61  LSKPALGQFSKTKLAPMKYLREFRL-EDISSYEVGQEIKAEDMFQSGDKIDVSGLSKGKG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR+   G   THG S+ HR  GS     +P RVFK KK+ G MG +  TV+NLEV
Sbjct: 120 FQGTIKRYGQKGGPKTHG-SMYHRRVGSMSANTNPARVFKGKKLPGHMGMDNTTVQNLEV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V VD +R LILVKG +PG  K   ++++ + KS 
Sbjct: 179 VRVDAERNLILVKGALPGP-KGGLLVIKSTVKSG 211


>gi|169350795|ref|ZP_02867733.1| hypothetical protein CLOSPI_01569 [Clostridium spiroforme DSM 1552]
 gi|169292381|gb|EDS74514.1| hypothetical protein CLOSPI_01569 [Clostridium spiroforme DSM 1552]
          Length = 242

 Score =  246 bits (629), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 119/211 (56%), Gaps = 4/211 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT V+  +G  IPVTV+      V+  +T+  +GY A+QVG  + + K  +
Sbjct: 2   KGILGRKIGMTQVFTTDGLLIPVTVVEATENVVLQKKTVATDGYDAIQVGFEDKREKLAN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G     N +PK+ + EFR  +      VG   +   F  G++VDVTG + GKG+ G
Sbjct: 62  KAELGIVKKANTAPKRFIKEFRFDEMMS-YEVGDKITVDSFVAGEVVDVTGTSKGKGYQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRH        HG S +HR  GS G    P R+   KK+ G+MG    TV+NLE+V+V
Sbjct: 121 VIKRHGQHIGPKGHG-SGAHRIVGSMGPIA-PNRIAPGKKLPGQMGHVTRTVQNLEIVAV 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D +  L+L+KG VPG KK   ++V+   K+A
Sbjct: 179 DVENNLLLIKGSVPGPKKG-LVIVKSGIKAA 208


>gi|218131327|ref|ZP_03460131.1| hypothetical protein BACEGG_02938 [Bacteroides eggerthii DSM 20697]
 gi|217986259|gb|EEC52596.1| hypothetical protein BACEGG_02938 [Bacteroides eggerthii DSM 20697]
          Length = 205

 Score =  246 bits (629), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 84/204 (41%), Positives = 125/204 (61%), Gaps = 4/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EG+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYQAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PKK L EF+  + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFEGADFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  + THG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
             +  L+L+KG VPG  K S +++
Sbjct: 181 IAEHNLLLIKGSVPGC-KGSIVII 203


>gi|148243215|ref|YP_001228372.1| 50S ribosomal protein L3 [Synechococcus sp. RCC307]
 gi|166234603|sp|A5GVW0|RL3_SYNR3 RecName: Full=50S ribosomal protein L3
 gi|147851525|emb|CAK29019.1| 50S ribosomal protein L3 [Synechococcus sp. RCC307]
          Length = 215

 Score =  246 bits (629), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 87/216 (40%), Positives = 126/216 (58%), Gaps = 3/216 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++ EGR +PVTV+    C++   +T   +GY AVQVG G+ + K 
Sbjct: 1   MSIGILGKKLGMSQFFDDEGRAVPVTVIEAGPCRITQVKTPTNDGYSAVQVGFGDVREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++P +G          + L E+RV   D  + +GS  +   F  GQ VDV+G T+G+GF
Sbjct: 61  VNQPAKGHLKKSGEDLLRHLKEYRVDSTDG-VELGSSVTVDAFEPGQKVDVSGDTMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRH F     THG S +HR  GSTG    PGR++  K+MAGR GG + TVK L V+
Sbjct: 120 SGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGTKTTVKGLVVL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            VD +R L++VKG VPG    + + +R + +     
Sbjct: 179 KVDSERNLLVVKGSVPGKP-GALLSIRPAVRVGAKA 213


>gi|291286312|ref|YP_003503128.1| 50S ribosomal protein L3 [Denitrovibrio acetiphilus DSM 12809]
 gi|290883472|gb|ADD67172.1| 50S ribosomal protein L3 [Denitrovibrio acetiphilus DSM 12809]
          Length = 211

 Score =  246 bits (629), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 92/213 (43%), Positives = 127/213 (59%), Gaps = 5/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVK 59
           M   ++ +K+GMT V+N +G  +PVTV+    C V   RT +K+GY A+Q+G  E  K  
Sbjct: 1   MAKAIIGKKVGMTQVFNEDGTVVPVTVVLAGPCVVTEVRTEEKDGYSAIQLGFDEIVKET 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            V+KPM G+F    V P K L EFR +  +  + VG     + F  G LVDV G +IGKG
Sbjct: 61  RVNKPMAGYFKKQGVKPMKFLKEFRGEAGE--ITVGQQVDVNVFEEGDLVDVQGTSIGKG 118

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKRH F G   THG    HR+ GS G  + PG   K +KM GRMGG +VTV+NL V
Sbjct: 119 FQGVMKRHGFAGGPKTHGSH-FHRAPGSIGMCEFPGETPKGRKMPGRMGGKKVTVQNLSV 177

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V V  +  L+LVKG +PG   ++ + ++++ K+
Sbjct: 178 VKVIPETNLLLVKGAIPG-HDDAIVYIKEAVKA 209


>gi|317968817|ref|ZP_07970207.1| 50S ribosomal protein L3 [Synechococcus sp. CB0205]
          Length = 215

 Score =  246 bits (629), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 86/216 (39%), Positives = 126/216 (58%), Gaps = 3/216 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++ EGR IPVTV+    C++   +T   +GY AVQ+G G+ + K 
Sbjct: 1   MSIGILGKKLGMSQFFDDEGRAIPVTVIEAGPCRITQLKTDSTDGYTAVQLGFGDIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKP +G  +       + L E+RV   D  L +G   + + F  GQ VDV+G TIG+GF
Sbjct: 61  VSKPAKGHLAKSGDELLRHLKEYRVDSVDG-LELGGDVTVAAFEAGQKVDVSGDTIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     THG S +HR  GSTG    PGRV+  K+MAGR GG ++T + L ++
Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRVYPGKRMAGRYGGKQITTRGLTIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            VD +R L++VKG VPG    + + +  + +     
Sbjct: 179 KVDAERNLLVVKGSVPGKP-GALLNILPAKRVGAKA 213


>gi|116072564|ref|ZP_01469830.1| 50S ribosomal protein L3 [Synechococcus sp. BL107]
 gi|116064451|gb|EAU70211.1| 50S ribosomal protein L3 [Synechococcus sp. BL107]
          Length = 218

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 82/219 (37%), Positives = 128/219 (58%), Gaps = 4/219 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +GR +PVT++    C++   +  D +GY AVQ+G GE + K 
Sbjct: 1   MSIGILGKKLGMSQLFDEQGRAVPVTLIEAGPCRITQLKNDDTDGYAAVQIGFGETREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G  +       + L E+RV   D  L +G   + S F  GQ VDV+G T+G+GF
Sbjct: 61  INKPSKGHLTKSGEDLLRHLREYRVDNVDG-LELGGSITVSDFEAGQKVDVSGDTMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     THG S +HR  GS G    PGR++  K+M+GR GG + T + L ++
Sbjct: 120 AGLQKRHGFSRGPMTHG-SKNHRQPGSIGAGTTPGRIYPGKRMSGRYGGKKTTTRGLTIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK-SAVNCKG 218
            VD  R L++VKG VPG    + + ++ + +  A   KG
Sbjct: 179 RVDSDRNLLVVKGSVPGKP-GALLNIKPAVRVGAKPAKG 216


>gi|188584836|ref|YP_001916381.1| LSU ribosomal protein L3P [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|226730540|sp|B2A4D9|RL3_NATTJ RecName: Full=50S ribosomal protein L3
 gi|179349523|gb|ACB83793.1| LSU ribosomal protein L3P [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 210

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 90/212 (42%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT +++ EG  +PVTV+    C VV  +  D +GY AVQ+G  + K   
Sbjct: 1   MKKAILGKKVGMTQIFSEEGEVMPVTVVKAGPCSVVQKKVEDTDGYNAVQIGFEDKKENK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
             KP +G F    V+PKK L EF ++  ++ L VG   +   F VG  +DVTG +  KGF
Sbjct: 61  TKKPEKGHFEKAGVNPKKHLTEFELESMEN-LEVGQELTVEQFEVGDQIDVTGTSKSKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR        THG S  +R+ GS G   D  RVFK + + GRMGGN VTV+ LEVV
Sbjct: 120 QGTIKRFKHSTGPKTHG-SRFYRAPGSLGSM-DISRVFKGQTLPGRMGGNTVTVQRLEVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  L+LVKG VPG KK   + + DS K+
Sbjct: 178 DVDKENNLLLVKGAVPGPKKG-LLKIVDSVKA 208


>gi|116617329|ref|YP_817700.1| 50S ribosomal protein L3P [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122272470|sp|Q03ZP5|RL3_LEUMM RecName: Full=50S ribosomal protein L3
 gi|116096176|gb|ABJ61327.1| LSU ribosomal protein L3P [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 228

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 83/219 (37%), Positives = 118/219 (53%), Gaps = 8/219 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  I VT +      V+  +  + +GY A+Q+G  + +   
Sbjct: 1   MTKGILGRKVGMTQVFTESGELIAVTAVEATPNVVLQVKNAETDGYSAIQLGYQDKRTVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  S  N +PK+ + E  ++   D   VG       F  G+ VDVTG+T G GF
Sbjct: 61  SNKPEQGHASKANTAPKRYVRE--IRNAGDEFNVGDEIKVDTFQAGEYVDVTGITKGHGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR        THG S  HR  GS G      RVFK K + GRMG N+ T++N+ +V
Sbjct: 119 QGAIKRLGQSRGPMTHG-SRYHRRPGSMGAI--INRVFKGKLLPGRMGNNKRTMQNIAIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            VD +  L+L+KG VPGA K S + V+ + K  VN K  
Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTVKSTVK--VNAKHP 211


>gi|325921481|ref|ZP_08183336.1| LSU ribosomal protein L3P [Xanthomonas gardneri ATCC 19865]
 gi|325548028|gb|EGD19027.1| LSU ribosomal protein L3P [Xanthomonas gardneri ATCC 19865]
          Length = 216

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 93/210 (44%), Positives = 128/210 (60%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G V RK GM+ V+  +GR +PVT++     ++   +T++ +GY AVQ+  G  +   V+K
Sbjct: 8   GFVGRKAGMSRVFTEDGRSVPVTLIEATPNRIAQIKTVEADGYSAVQITVGARRAALVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P  G F+   V   + L+EFRV+        VG       F VGQ VDV G+T GKGF G
Sbjct: 68  PAAGHFAKAKVEAGRGLWEFRVEDAQLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQG 127

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR+NF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  + + +NLEVV V
Sbjct: 128 TIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVKV 187

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +RGLI ++G VPGA     ++VR + K+
Sbjct: 188 DVERGLIAIRGAVPGAAGGD-VIVRPASKA 216


>gi|160883064|ref|ZP_02064067.1| hypothetical protein BACOVA_01027 [Bacteroides ovatus ATCC 8483]
 gi|260175416|ref|ZP_05761828.1| 50S ribosomal protein L3 [Bacteroides sp. D2]
 gi|299144624|ref|ZP_07037692.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_23]
 gi|315923646|ref|ZP_07919886.1| 50S ribosomal protein L3 [Bacteroides sp. D2]
 gi|156111536|gb|EDO13281.1| hypothetical protein BACOVA_01027 [Bacteroides ovatus ATCC 8483]
 gi|298515115|gb|EFI38996.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_23]
 gi|313697521|gb|EFS34356.1| 50S ribosomal protein L3 [Bacteroides sp. D2]
          Length = 205

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 84/204 (41%), Positives = 124/204 (60%), Gaps = 4/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PK+ L EF+    D  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKRAGVTPKRHLAEFKEFGTD--LNLGDTITVEMFNDANFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  +ATHG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
                L+L+KG +PG  K S +L+
Sbjct: 181 IADHNLLLIKGSIPGC-KGSIVLI 203


>gi|239980056|ref|ZP_04702580.1| 50S ribosomal protein L3 [Streptomyces albus J1074]
          Length = 200

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 93/202 (46%), Positives = 121/202 (59%), Gaps = 2/202 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V++   R +PVTV+      V   RT D +GY AVQ+  GE   + V+KP++G F+ 
Sbjct: 1   MTQVWDENNRVVPVTVVKAGANVVTQVRTNDTDGYEAVQIAFGEIDPRKVNKPLKGHFAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
            +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNF G
Sbjct: 61  ADVTPRRHLVEIR-TADASEYTLGQELNADTFEAGLKVDVTGKSKGKGFAGVMKRHNFKG 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
           L A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +VD ++GL+L+
Sbjct: 120 LGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVDAEKGLLLI 179

Query: 192 KGCVPGAKKNSWILVRDSFKSA 213
           KG VPG      +LVR + K A
Sbjct: 180 KGAVPGPN-GGLVLVRTAAKGA 200


>gi|256819982|ref|YP_003141261.1| 50S ribosomal protein L3 [Capnocytophaga ochracea DSM 7271]
 gi|315225401|ref|ZP_07867215.1| 50S ribosomal protein L3 [Capnocytophaga ochracea F0287]
 gi|256581565|gb|ACU92700.1| ribosomal protein L3 [Capnocytophaga ochracea DSM 7271]
 gi|314944674|gb|EFS96709.1| 50S ribosomal protein L3 [Capnocytophaga ochracea F0287]
          Length = 205

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 82/205 (40%), Positives = 127/205 (61%), Gaps = 4/205 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP T++    C V   RT + +GY A+Q+G  +   K  +
Sbjct: 2   SGLIGKKVGMTSIFDENGKNIPCTIIEAGPCVVTQVRTKEVDGYDALQLGFDDKAEKRAT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F     S KKK+ EF+  +D+    +G   +  +FT G+ VD+TG++ GKGF G
Sbjct: 62  KAELGHFKKAGTSVKKKVVEFQGFEDN--YKLGDTITVDFFTEGEFVDITGVSKGKGFQG 119

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            ++RH FGG  + THG     R+ GS G    P RVFK  +MAGRMG  +VTV+NL+V+ 
Sbjct: 120 VVRRHGFGGVGQTTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           V  ++ L++VKGC+PG  KN+++ +
Sbjct: 180 VVAEKNLLVVKGCIPG-HKNAYVTI 203


>gi|296126865|ref|YP_003634117.1| 50S ribosomal protein L3 [Brachyspira murdochii DSM 12563]
 gi|296018681|gb|ADG71918.1| 50S ribosomal protein L3 [Brachyspira murdochii DSM 12563]
          Length = 217

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 83/204 (40%), Positives = 116/204 (56%), Gaps = 3/204 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +KLGMT V++  G  I VTV+    C V+  R  +K+GY A+Q+G G  K K++ 
Sbjct: 2   VGIIGKKLGMTTVFDETGNAIAVTVVEAGPCTVMQIRDNEKDGYSAIQLGYGAVKEKHLK 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F   N+ PKK L EFR+        VG       F  G  +DV+ ++ G+GF+G
Sbjct: 62  KPQIGQFKKANLEPKKYLKEFRMDNTSS-YTVGQELKADVFQAGDFIDVSSLSKGRGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRHN+ G   +HG S   R  GS GC   P RV+K K M G MG    T++NL+VV +
Sbjct: 121 VMKRHNYDGGPMSHG-SNFRRRAGSIGCNSYPARVWKGKGMPGHMGNALTTIQNLKVVEI 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
                LI++KG +PGA  NS + +
Sbjct: 180 RPDDNLIMIKGAIPGAV-NSIVKL 202


>gi|224537817|ref|ZP_03678356.1| hypothetical protein BACCELL_02704 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520503|gb|EEF89608.1| hypothetical protein BACCELL_02704 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 205

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 84/204 (41%), Positives = 125/204 (61%), Gaps = 4/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EG+ +P TV+    C V   ++++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKSVEKDGYAAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PKK L EF+  + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFNDVTFVDVIGTSKGKGFQGV 120

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  +ATHG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
                L+L+KG VPG  K S +++
Sbjct: 181 LPDHNLLLIKGSVPGC-KGSIVII 203


>gi|227499195|ref|ZP_03929330.1| 50S ribosomal protein L3 [Acidaminococcus sp. D21]
 gi|226904642|gb|EEH90560.1| 50S ribosomal protein L3 [Acidaminococcus sp. D21]
          Length = 219

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 91/221 (41%), Positives = 134/221 (60%), Gaps = 5/221 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT ++  +G  +PVTV+    C V+ ++T + +GY A+Q+G G+ K K+
Sbjct: 1   MARGILGKKLGMTQIFEADGTLVPVTVVEAGPCVVLANKTEETDGYNAIQLGFGDIKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+GFF    V+P K + EFR+ +  +   VG   +   F  G LVD  G++ GKGF
Sbjct: 61  VNKPMKGFFDKAGVAPVKFVREFRLAEASE-YKVGDKIAADIFAAGDLVDAIGVSRGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           +G ++RHNF      HG S SHR  GS G       GRV K KK+ GR+GG   TV+ L 
Sbjct: 120 AGTIERHNFARGPMKHG-SKSHREPGSNGPMHSGPGGRVIKGKKLPGRLGGQSATVQRLT 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           +  VD +R LI+VKG VPGA   +++++RD+ +  V    K
Sbjct: 179 IAKVDAERNLIMVKGSVPGAA-GTFLMLRDTVRPVVKKADK 218


>gi|238492064|ref|XP_002377269.1| 50S ribosomal protein L3 [Aspergillus flavus NRRL3357]
 gi|220697682|gb|EED54023.1| 50S ribosomal protein L3 [Aspergillus flavus NRRL3357]
          Length = 296

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 98/214 (45%), Positives = 138/214 (64%), Gaps = 3/214 (1%)

Query: 2   RSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           R+G +A K GMT +Y+   G+RI  TVL LD  +V+ H+T  ++GY AVQVG+G     N
Sbjct: 72  RTGAIAIKKGMTALYDTETGKRIACTVLQLDRVEVISHKTRQQHGYFAVQVGSGWKHPNN 131

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++K + G FS   +SPK+ +FEFRV+ ++ LLPVG   +  +F  GQ VD    T GKGF
Sbjct: 132 LTKSLLGHFSVNGISPKRHIFEFRVRDENGLLPVGQAINADWFQEGQYVDARSNTKGKGF 191

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179
           +G MKRH FGG   +HGVS++HRS GS G  Q  G RV+  KKMAG MG  + TV+NL++
Sbjct: 192 AGVMKRHGFGGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLKI 251

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           + VD + G+++V G V G  K   + ++D+ K  
Sbjct: 252 LKVDSQNGIVVVNGAVSGP-KGCIVRIQDAIKKP 284


>gi|169774031|ref|XP_001821484.1| 54S ribosomal protein L9 [Aspergillus oryzae RIB40]
 gi|83769345|dbj|BAE59482.1| unnamed protein product [Aspergillus oryzae]
          Length = 296

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 98/214 (45%), Positives = 138/214 (64%), Gaps = 3/214 (1%)

Query: 2   RSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           R+G +A K GMT +Y+   G+RI  TVL LD  +V+ H+T  ++GY AVQVG+G     N
Sbjct: 72  RTGAIAIKKGMTALYDTETGKRIACTVLQLDRVEVISHKTRQQHGYFAVQVGSGWKHPNN 131

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++K + G FS   +SPK+ +FEFRV+ ++ LLPVG   +  +F  GQ VD    T GKGF
Sbjct: 132 LTKSLLGHFSVNGISPKRHIFEFRVRDENGLLPVGQAINADWFQEGQYVDARSNTKGKGF 191

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179
           +G MKRH FGG   +HGVS++HRS GS G  Q  G RV+  KKMAG MG  + TV+NL++
Sbjct: 192 AGVMKRHGFGGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLKI 251

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           + VD + G+++V G V G  K   + ++D+ K  
Sbjct: 252 LKVDSQNGIVVVNGAVSGP-KGCIVRIQDAIKKP 284


>gi|153805957|ref|ZP_01958625.1| hypothetical protein BACCAC_00202 [Bacteroides caccae ATCC 43185]
 gi|149130634|gb|EDM21840.1| hypothetical protein BACCAC_00202 [Bacteroides caccae ATCC 43185]
          Length = 205

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 82/204 (40%), Positives = 124/204 (60%), Gaps = 4/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PK+ L EF+  + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKRAGVTPKRHLAEFK--EFETELNLGDTVTVELFNDANFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  + THG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
                L+L+KG +PG  K S +L+
Sbjct: 181 IADHNLLLIKGSIPGC-KGSIVLI 203


>gi|329956703|ref|ZP_08297276.1| 50S ribosomal protein L3 [Bacteroides clarus YIT 12056]
 gi|328524075|gb|EGF51151.1| 50S ribosomal protein L3 [Bacteroides clarus YIT 12056]
          Length = 205

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 84/204 (41%), Positives = 125/204 (61%), Gaps = 4/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EG+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYQAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PKK L EF+  + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFEGVDFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  + THG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
             +  L+L+KG VPG  K S +++
Sbjct: 181 IAEHNLLLIKGSVPGC-KGSIVII 203


>gi|125975384|ref|YP_001039294.1| 50S ribosomal protein L3P [Clostridium thermocellum ATCC 27405]
 gi|256005329|ref|ZP_05430295.1| ribosomal protein L3 [Clostridium thermocellum DSM 2360]
 gi|281419346|ref|ZP_06250361.1| 50S ribosomal protein L3 [Clostridium thermocellum JW20]
 gi|166233136|sp|A3DJH2|RL3_CLOTH RecName: Full=50S ribosomal protein L3
 gi|125715609|gb|ABN54101.1| LSU ribosomal protein L3P [Clostridium thermocellum ATCC 27405]
 gi|255990765|gb|EEU00881.1| ribosomal protein L3 [Clostridium thermocellum DSM 2360]
 gi|281406966|gb|EFB37229.1| 50S ribosomal protein L3 [Clostridium thermocellum JW20]
 gi|316939500|gb|ADU73534.1| 50S ribosomal protein L3 [Clostridium thermocellum DSM 1313]
          Length = 212

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 90/213 (42%), Positives = 131/213 (61%), Gaps = 4/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ RK+GMT V++ +G  IPVTV+      VV  +  + +GY +V+V  G+ + K 
Sbjct: 1   MEKFMLGRKIGMTQVFDEDGLLIPVTVIEAGPITVVQKKKPETDGYNSVRVAFGDVQEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119
           ++KP +G F+ + ++PKK + EFRV  D D   +         F  G  VDVTG++ GKG
Sbjct: 61  LNKPEKGLFAKLGIAPKKYIREFRVD-DPDKYELKQEIKVEEMFQPGDRVDVTGISKGKG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KR      + THG S+ HR  GS G   +P RVFK KK+ G MG  RVTV+NL+V
Sbjct: 120 FAGVIKRFGNRRGKETHG-SMYHRRVGSMGANTNPARVFKGKKLPGHMGVERVTVQNLDV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R L+LVKG VPGA K   ++++D+ K+
Sbjct: 179 VKVDAERNLMLVKGAVPGA-KGGLLMIKDTVKA 210


>gi|58583207|ref|YP_202223.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84625044|ref|YP_452416.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|81311762|sp|Q5GWT3|RL3_XANOR RecName: Full=50S ribosomal protein L3
 gi|109893572|sp|Q2NZY5|RL3_XANOM RecName: Full=50S ribosomal protein L3
 gi|212288596|sp|B2SQR0|RL3_XANOP RecName: Full=50S ribosomal protein L3
 gi|58427801|gb|AAW76838.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84368984|dbj|BAE70142.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 216

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 92/210 (43%), Positives = 127/210 (60%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G V RK GM+ ++  +GR +PVT++     ++   +T++ +GY AVQ+  G  +   V+K
Sbjct: 8   GFVGRKAGMSRIFTEDGRSVPVTLIEATPNRIAQIKTVEVDGYSAVQITVGARRAALVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P  G F+   V   + L+EFRV+        VG       F VGQ VDV G+T GKGF G
Sbjct: 68  PAAGHFAKAKVEAGRGLWEFRVEDAHLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQG 127

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR+NF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  + + +NLEVV V
Sbjct: 128 TIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVKV 187

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +RGLI + G VPGA     ++VR + K+
Sbjct: 188 DVERGLIAIHGAVPGAAGGD-VIVRPASKA 216


>gi|21241737|ref|NP_641319.1| 50S ribosomal protein L3 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|78046555|ref|YP_362730.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|294627843|ref|ZP_06706422.1| 50S ribosomal protein L3 [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|294663996|ref|ZP_06729410.1| 50S ribosomal protein L3 [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|325925387|ref|ZP_08186789.1| LSU ribosomal protein L3P [Xanthomonas perforans 91-118]
 gi|42559654|sp|Q8PNS4|RL3_XANAC RecName: Full=50S ribosomal protein L3
 gi|109893571|sp|Q3BWY3|RL3_XANC5 RecName: Full=50S ribosomal protein L3
 gi|21107108|gb|AAM35855.1| 50S ribosomal protein L3 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|78034985|emb|CAJ22630.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|292597757|gb|EFF41915.1| 50S ribosomal protein L3 [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292606225|gb|EFF49462.1| 50S ribosomal protein L3 [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|325544265|gb|EGD15646.1| LSU ribosomal protein L3P [Xanthomonas perforans 91-118]
          Length = 216

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 94/210 (44%), Positives = 128/210 (60%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G V RK GM+ V+  +GR +PVT++     ++   +T++ +GY AVQV  G  +   V+K
Sbjct: 8   GFVGRKAGMSRVFTEDGRSVPVTLIEATPNRIAQIKTVEVDGYSAVQVTVGARRAALVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P  G F+   V   + L+EFRV+        VG       F VGQ VDV G+T GKGF G
Sbjct: 68  PAAGHFAKAKVEAGRGLWEFRVEDAQLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQG 127

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR+NF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  + + +NLEVV V
Sbjct: 128 TIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVKV 187

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +RGLI ++G VPGA     ++VR + K+
Sbjct: 188 DVERGLIAIRGAVPGAAGGD-VIVRPASKA 216


>gi|116075767|ref|ZP_01473026.1| 50S ribosomal protein L3 [Synechococcus sp. RS9916]
 gi|116067082|gb|EAU72837.1| 50S ribosomal protein L3 [Synechococcus sp. RS9916]
          Length = 218

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 79/216 (36%), Positives = 127/216 (58%), Gaps = 3/216 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++ +G+ +PVT++    C++   +T + +GY AVQ+G GE + K 
Sbjct: 1   MSIGILGKKLGMSQFFDEQGKAVPVTLIEAGPCRITQLKTSETDGYSAVQIGFGETRDKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G  +       + L E+RV  D     +G+  +   F  GQ VDV+G ++G+GF
Sbjct: 61  INKPAKGHLAKSGEELLRHLSEYRVD-DVSGFELGNQVTVGDFEAGQKVDVSGDSMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     THG S +HR  GSTG    PGR++  K+MAGR GG ++T + L ++
Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLTII 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            VD +R L++VKG VPG    S + +R + +     
Sbjct: 179 KVDSERNLLVVKGSVPGKP-GSLLNIRPANRVGAKP 213


>gi|21230364|ref|NP_636281.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66769642|ref|YP_244404.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|166710831|ref|ZP_02242038.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzicola BLS256]
 gi|188992854|ref|YP_001904864.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris
           str. B100]
 gi|42559653|sp|Q8PC49|RL3_XANCP RecName: Full=50S ribosomal protein L3
 gi|81304403|sp|Q4URD9|RL3_XANC8 RecName: Full=50S ribosomal protein L3
 gi|226730589|sp|B0RU82|RL3_XANCB RecName: Full=50S ribosomal protein L3
 gi|21111920|gb|AAM40205.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66574974|gb|AAY50384.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|167734614|emb|CAP52824.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris]
          Length = 216

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 93/210 (44%), Positives = 128/210 (60%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G V RK GM+ V+  +GR +PVT++     ++   +T++ +GY AVQ+  G  +   V+K
Sbjct: 8   GFVGRKAGMSRVFTEDGRSVPVTLIEATPNRIAQIKTVEVDGYSAVQITVGARRAALVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P  G F+   V   + L+EFRV+        VG       F VGQ VDV G+T GKGF G
Sbjct: 68  PAAGHFAKAKVEAGRGLWEFRVEDAQLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQG 127

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR+NF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  + + +NLEVV V
Sbjct: 128 TIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVKV 187

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +RGLI ++G VPGA     ++VR + K+
Sbjct: 188 DVERGLIAIRGAVPGAAGGD-VIVRPASKA 216


>gi|93005314|ref|YP_579751.1| 50S ribosomal protein L3 [Psychrobacter cryohalolentis K5]
 gi|109893543|sp|Q1QDI6|RL3_PSYCK RecName: Full=50S ribosomal protein L3
 gi|92392992|gb|ABE74267.1| LSU ribosomal protein L3P [Psychrobacter cryohalolentis K5]
          Length = 212

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 93/213 (43%), Positives = 130/213 (61%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V +K GMT V+   G  IPVTV+ +   ++   +  D +GY A+QV  G  +   
Sbjct: 1   MAIGLVGKKCGMTRVFTEAGASIPVTVVEISANRITQVKNTDVDGYQAIQVTTGTRRDSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFR-VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+   +G F+   V+  + ++EFR    D +   +G       F  GQ+VDVTG + GKG
Sbjct: 61  VTAAQKGHFAKAGVAAGRGVWEFRANDSDLEGREIGGEILADLFEQGQMVDVTGNSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KRHNF    ATHG S+SHR+ GSTG  Q PG+VFK KKM G+MG  RVTV+ LEV
Sbjct: 121 FQGGVKRHNFSMQDATHGNSVSHRAIGSTGQNQSPGKVFKGKKMPGQMGNKRVTVQGLEV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +SVD + GL+++KG +PGA     ++VR S K+
Sbjct: 181 ISVDVENGLLVIKGAIPGATGGD-VIVRPSVKA 212


>gi|6321659|ref|NP_011736.1| Mrpl9p [Saccharomyces cerevisiae S288c]
 gi|1710598|sp|P31334|RM09_YEAST RecName: Full=54S ribosomal protein L9, mitochondrial; AltName:
           Full=YmL9; Flags: Precursor
 gi|886912|emb|CAA61168.1| ORF 269 [Saccharomyces cerevisiae]
 gi|1323396|emb|CAA97248.1| MRPL9 [Saccharomyces cerevisiae]
 gi|45270438|gb|AAS56600.1| YGR220C [Saccharomyces cerevisiae]
 gi|151943496|gb|EDN61807.1| YmL9 [Saccharomyces cerevisiae YJM789]
 gi|190406772|gb|EDV10039.1| 60S ribosomal protein L9, mitochondrial precursor [Saccharomyces
           cerevisiae RM11-1a]
 gi|207344963|gb|EDZ71935.1| YGR220Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256272642|gb|EEU07619.1| Mrpl9p [Saccharomyces cerevisiae JAY291]
 gi|259146721|emb|CAY79978.1| Mrpl9p [Saccharomyces cerevisiae EC1118]
 gi|285812413|tpg|DAA08313.1| TPA: Mrpl9p [Saccharomyces cerevisiae S288c]
          Length = 269

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 98/212 (46%), Positives = 139/212 (65%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           R G++ RK GM   ++   G R   T+L ++N +V++HRT + NGY A QVG G   +  
Sbjct: 58  RCGLITRKKGMMPYFDKSTGERSAATILEVNNVEVIMHRTSEVNGYFACQVGYGSRHLSK 117

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS+ M G F+S  V+PK+ + EFRV+ +  L+P G++  PS+F  GQ VDV  ++ GKGF
Sbjct: 118 VSRQMLGHFASKVVNPKEHVAEFRVKDEKGLIPPGTLLKPSFFKEGQYVDVRSVSKGKGF 177

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR+ F GLRA+HG SI HR  GS G  QDPGRV   +KM G MG   VT++N++V+
Sbjct: 178 TGVMKRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVL 237

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VDD+  +I VKG V G  KNS++ ++D+ K 
Sbjct: 238 KVDDENNVIWVKGSVAGP-KNSFVKIQDAIKK 268


>gi|89891148|ref|ZP_01202656.1| 50S ribosomal protein L3 (rplC) [Flavobacteria bacterium BBFL7]
 gi|89516792|gb|EAS19451.1| 50S ribosomal protein L3 (rplC) [Flavobacteria bacterium BBFL7]
          Length = 205

 Score =  245 bits (627), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 85/206 (41%), Positives = 126/206 (61%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ RK+GMT +Y+  G+ +P T++    C V   RT + +GY A+Q+G  +   KN S
Sbjct: 2   SGLIGRKIGMTSIYDENGKNMPCTIIEAGPCVVTQVRTEEVDGYSALQLGFDDKSDKNAS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K  +G F       KKK+ EF+    D++  +G   S   FT G+ +DV+G + GKGF G
Sbjct: 62  KAAQGHFKKAGTGVKKKVVEFQGF--DEVYKLGDAISVDIFTEGEFIDVSGTSKGKGFQG 119

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH F G  +ATHG     R+ GS G    P RVFK  +MAG+MG  +V V+NL V+ 
Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGQMGNEKVKVENLRVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L++VKGCVPG  KNS+++++
Sbjct: 180 VVPEKNLLVVKGCVPG-HKNSYVILQ 204


>gi|156044218|ref|XP_001588665.1| hypothetical protein SS1G_10212 [Sclerotinia sclerotiorum 1980]
 gi|154694601|gb|EDN94339.1| hypothetical protein SS1G_10212 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 311

 Score =  245 bits (627), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 92/215 (42%), Positives = 133/215 (61%), Gaps = 3/215 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +  K GMT +Y+   G R P TV+ LD  QVV H+T +KNGY AVQVGAG     
Sbjct: 74  LRTGALGIKKGMTALYDPETGVRTPCTVVQLDRVQVVAHKTREKNGYYAVQVGAGWKHPS 133

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NVS+P  G F +  V+PK+ + EFRV+ +  LL VG      +F  GQ VD    + G G
Sbjct: 134 NVSRPELGHFEASEVAPKRHMAEFRVKNEGGLLEVGRSIGAEWFIEGQFVDARANSRGMG 193

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MK+  + G  A+HG S +HR+ GS G  Q  G RV   K+MAGRMG ++VT++N++
Sbjct: 194 FAGGMKKWGWSGQPASHGNSKNHRTMGSAGASQGSGSRVHPGKRMAGRMGNHQVTIQNVK 253

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V+ VD ++GL+++ GC+ G      + ++D+ K  
Sbjct: 254 VLKVDAEKGLVILNGCIAGPD-GCVVKIQDAIKKP 287


>gi|289665137|ref|ZP_06486718.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289669344|ref|ZP_06490419.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 216

 Score =  245 bits (627), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 92/210 (43%), Positives = 127/210 (60%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G V RK GM+  +  +GR +PVT++     ++   +T++ +GY AVQ+  G  +   V+K
Sbjct: 8   GFVGRKAGMSRFFTEDGRSVPVTLIEATPNRIAQIKTVEVDGYSAVQITVGARRAALVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P  G F+   V   + L+EFRV+        VG       F VGQ VDV G+T GKGF G
Sbjct: 68  PAAGHFAKAKVEAGRGLWEFRVEDAQLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQG 127

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR+NF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  + + +NLEVV V
Sbjct: 128 TIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVKV 187

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +RGLI ++G VPGA     ++VR + K+
Sbjct: 188 DVERGLIAIRGAVPGAAGGD-VIVRPASKA 216


>gi|57867723|ref|YP_189394.1| 50S ribosomal protein L3 [Staphylococcus epidermidis RP62A]
 gi|81819347|sp|Q5HLZ9|RL3_STAEQ RecName: Full=50S ribosomal protein L3
 gi|57638381|gb|AAW55169.1| ribosomal protein L3 [Staphylococcus epidermidis RP62A]
          Length = 220

 Score =  245 bits (627), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 93/221 (42%), Positives = 122/221 (55%), Gaps = 11/221 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+QVG        
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60

Query: 54  -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
            G    K  +KP  G     + +PK+ + EFR   + D   VG   S   F  G ++DVT
Sbjct: 61  KGSKSNKYANKPAEGHAKKADTAPKRFIREFR-NLNVDEYEVGQEVSVDTFETGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH  G     HG    HR+ GS G   D  +VFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQGRGPMAHGSH-FHRAPGSVGMASDASKVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           TV+NLEVV VD +  +ILVKG VPG KK   + +  S K  
Sbjct: 179 TVQNLEVVQVDTENSVILVKGNVPGPKKG-LVEITTSIKKG 218


>gi|302543361|ref|ZP_07295703.1| 50S ribosomal protein L3 [Streptomyces hygroscopicus ATCC 53653]
 gi|302460979|gb|EFL24072.1| 50S ribosomal protein L3 [Streptomyces himastatinicus ATCC 53653]
          Length = 214

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 98/211 (46%), Positives = 127/211 (60%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            GV+  KLGMT V++   R +PVTV+    C V   RT D +GY AVQ+  GE   + V+
Sbjct: 6   KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTDDADGYDAVQIAFGEIDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F+  +V+P++ L E R   D     +G   +   F  G  VDVTG + GKG +G
Sbjct: 66  KPLKGHFAKADVTPRRHLVELR-TADASEYTLGQEVTAEAFESGVKVDVTGTSKGKGTAG 124

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH FGGL A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V +V
Sbjct: 125 VMKRHGFGGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+L+KG VPG      +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214


>gi|315659227|ref|ZP_07912091.1| 50S ribosomal protein L3 [Staphylococcus lugdunensis M23590]
 gi|315495652|gb|EFU83983.1| 50S ribosomal protein L3 [Staphylococcus lugdunensis M23590]
          Length = 220

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 91/221 (41%), Positives = 121/221 (54%), Gaps = 11/221 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+QVG  + +   
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60

Query: 61  V--------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
                    +KP  G       +PK+ + EFR    D+   VG   S   F  G ++DVT
Sbjct: 61  KDAKSNKYATKPAEGHAKKAGTAPKRFIREFRNVNVDE-YEVGQEVSVDTFEAGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH        HG    HR+ GS G   D  RVFK +K  GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMAHGSH-FHRAPGSVGMASDASRVFKGQKAPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V+NLEVV VD + G+ILVKG VPGAKK   + ++ S K  
Sbjct: 179 IVQNLEVVQVDTENGVILVKGNVPGAKKG-LVEIKSSIKKG 218


>gi|325294396|ref|YP_004280910.1| 50S ribosomal protein L3 [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325064844|gb|ADY72851.1| 50S ribosomal protein L3 [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 207

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 84/207 (40%), Positives = 117/207 (56%), Gaps = 5/207 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--VKN 60
            G++ RK+GMT ++  +G+ I VTV+    C VV  RT +++GY A+Q+G  E       
Sbjct: 2   KGILGRKVGMTQIFTEDGKAIAVTVIEAGPCTVVQKRTPERDGYSALQLGFMEKNKHESK 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
             KP+ G F    + P + L E +     D   VG   +   F  G+ VD+TG + G+GF
Sbjct: 62  FPKPLLGHFKKAGIKPTRWLKEVKFDN-IDQYNVGDKITVEIFQPGEKVDITGTSKGRGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH FGG R +HG S  H   GS G    PGRV K K+MAG  G   VT++NLE+V
Sbjct: 121 AGYHKRHGFGGGRKSHG-SDFHEGPGSIGACAFPGRVHKGKRMAGHYGNETVTIRNLEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207
            V  ++ LILVKG VPG  K   ++V+
Sbjct: 180 DVIPEKNLILVKGSVPG-HKGGLVIVK 205


>gi|319900924|ref|YP_004160652.1| LSU ribosomal protein L3P [Bacteroides helcogenes P 36-108]
 gi|319415955|gb|ADV43066.1| LSU ribosomal protein L3P [Bacteroides helcogenes P 36-108]
          Length = 205

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 84/204 (41%), Positives = 125/204 (61%), Gaps = 4/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EG+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PKK L EF+  + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFNDATFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  + THG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
             +  L+L+KG VPG  K S +++
Sbjct: 181 IAEHNLLLIKGSVPGC-KGSIVII 203


>gi|242243947|ref|ZP_04798390.1| 50S ribosomal protein L3 [Staphylococcus epidermidis W23144]
 gi|242232580|gb|EES34892.1| 50S ribosomal protein L3 [Staphylococcus epidermidis W23144]
 gi|319400623|gb|EFV88848.1| 50S ribosomal protein L3 [Staphylococcus epidermidis FRI909]
          Length = 220

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 92/221 (41%), Positives = 122/221 (55%), Gaps = 11/221 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+QVG        
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60

Query: 54  -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
            G    K  +KP  G     + +PK+ + EFR    D+   VG   S   F  G ++DVT
Sbjct: 61  KGSKSNKYANKPAEGHAKKADTAPKRFIREFRNVNVDE-YEVGQEVSVDTFETGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH  G     HG    HR+ GS G   D  +VFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQGRGPMAHGSH-FHRAPGSVGMASDASKVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           TV+NLEVV +D +  +ILVKG VPG KK   + +  S K  
Sbjct: 179 TVQNLEVVQIDTENSVILVKGNVPGPKKG-LVEITTSIKKG 218


>gi|219113447|ref|XP_002186307.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209583157|gb|ACI65777.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 229

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 104/215 (48%), Positives = 143/215 (66%), Gaps = 5/215 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G +  K+GM  +++  G R P T+L LDN  V+  ++++++GY AVQ+ AG+ K KNV
Sbjct: 16  RCGALGIKVGMMPLFDDWGVRHPCTILFLDNNVVLGQKSIEQHGYWAVQIAAGQRKRKNV 75

Query: 62  SKPMRGFFSSV----NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
              + G +  +    N +P   + EFRV     L+PVG+     +F  GQ VDV+G++ G
Sbjct: 76  GVSVLGQYKHILEDENENPPYLVREFRVSDGAHLVPVGARIHARHFVPGQNVDVSGISKG 135

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF GAMKRHNFGG+ A+HGVS SHR+ GSTG  QDPG+VFK KKMAGRMG  RVTV+NL
Sbjct: 136 KGFQGAMKRHNFGGMPASHGVSKSHRALGSTGQCQDPGKVFKGKKMAGRMGTERVTVQNL 195

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VV VD  R L+ ++G VPG  K +++ +RD+ K 
Sbjct: 196 RVVKVDRGRNLLFLEGAVPG-NKGAFVEIRDAVKK 229


>gi|212528688|ref|XP_002144501.1| 50S ribosomal protein L3 [Penicillium marneffei ATCC 18224]
 gi|210073899|gb|EEA27986.1| 50S ribosomal protein L3 [Penicillium marneffei ATCC 18224]
          Length = 300

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 103/215 (47%), Positives = 141/215 (65%), Gaps = 3/215 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G++A K GMT +Y+   G+R P TVL LD CQVV H+T+DK+GY AVQVGAG  K +
Sbjct: 72  LRTGLLAIKKGMTGLYDPETGKRTPCTVLQLDRCQVVSHKTMDKHGYFAVQVGAGFKKPQ 131

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++K + G FS   ++PK+ + EFRV+    LL +GS  S ++F VGQ VD    T GKG
Sbjct: 132 RLTKALLGHFSVNEIAPKRYVHEFRVKDQSGLLEIGSTLSANWFQVGQFVDARSNTKGKG 191

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKRH F G   +HGVS++HRS GS G  Q  G RV+  KKMAG MG  + T++NL+
Sbjct: 192 FAGVMKRHGFHGQDRSHGVSLTHRSMGSAGPSQGGGSRVYPGKKMAGNMGNVQNTLQNLK 251

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V+ VD   G+I+V G V G  K   + ++D+ K  
Sbjct: 252 VLEVDPVNGIIVVNGSVSGP-KGCLVQLQDALKKP 285


>gi|223042682|ref|ZP_03612731.1| 50S ribosomal protein L3 [Staphylococcus capitis SK14]
 gi|222444345|gb|EEE50441.1| 50S ribosomal protein L3 [Staphylococcus capitis SK14]
          Length = 220

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 93/221 (42%), Positives = 120/221 (54%), Gaps = 11/221 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+QVG        
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60

Query: 54  -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
            G    K  +KP  G     + +PK+ + EFR    D+   VG   S   F  G ++DVT
Sbjct: 61  KGSKSNKYANKPAEGHAKKADTTPKRFIREFRNVNVDE-YEVGQEVSVDTFETGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH        HG    HR+ GS G   D  RVFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMGHGSH-FHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           TV+NLEVV VD    +ILVKG VPG KK   + +  S K  
Sbjct: 179 TVQNLEVVQVDTDNSVILVKGNVPGPKKG-LVEITTSIKKG 218


>gi|167755912|ref|ZP_02428039.1| hypothetical protein CLORAM_01432 [Clostridium ramosum DSM 1402]
 gi|167703904|gb|EDS18483.1| hypothetical protein CLORAM_01432 [Clostridium ramosum DSM 1402]
          Length = 242

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 83/211 (39%), Positives = 120/211 (56%), Gaps = 4/211 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT V+  +G  IPVTV+  D   V+  +T+  +GY A+QVG  + + K  +
Sbjct: 2   KGILGRKIGMTQVFTTDGLLIPVTVVEADANVVLQKKTVATDGYDAIQVGFEDKREKLAN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G     N +PK+ + EFR  +      VG   +   F  G++VDVTG + GKG+ G
Sbjct: 62  KAELGIVKKANTAPKRFIKEFRYDEMMS-YEVGDKITVDSFVAGEVVDVTGTSKGKGYQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRH        HG S +HR  GS G    P R+   KK+ G+MG    TV+NLEVV+V
Sbjct: 121 VIKRHGQRIGPKGHG-SGAHRIVGSMGPIA-PNRIAPGKKLPGQMGHVTRTVQNLEVVAV 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D +  L+L+KG VPG KK   ++V+   K+A
Sbjct: 179 DVENNLLLIKGSVPGPKKG-LVIVKSGIKAA 208


>gi|307154842|ref|YP_003890226.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 7822]
 gi|306985070|gb|ADN16951.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 7822]
          Length = 212

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 90/212 (42%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT +++ E G  IPVTV+H   C +   +T + +GY ++Q+G GE K K
Sbjct: 1   MSVGIIGTKLGMTQIFDKETGIAIPVTVIHAGPCPITQIKTPETDGYSSIQIGYGEVKEK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++KP+ G        P K L E+R+    +   +G       F  G +VDV G TIG+G
Sbjct: 61  ALNKPLLGHLKKSESIPLKNLKEYRLDNP-EQYQLGDALKVDIFQPGDIVDVAGKTIGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G  KRHNF     THG S +HR  GSTG    PGRV+  K+MAGR GG +VT++ L V
Sbjct: 120 FAGYQKRHNFKRGSMTHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGRYGGTQVTIRKLTV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V VD +R LIL+KG VPG   N  + +  + K
Sbjct: 179 VQVDPERNLILIKGAVPGKPGN-LLSITPAKK 209


>gi|314934297|ref|ZP_07841656.1| 50S ribosomal protein L3 [Staphylococcus caprae C87]
 gi|313652227|gb|EFS15990.1| 50S ribosomal protein L3 [Staphylococcus caprae C87]
          Length = 220

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 93/221 (42%), Positives = 120/221 (54%), Gaps = 11/221 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+QVG        
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60

Query: 54  -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
            G    K  +KP  G     + +PK+ + EFR    D+   VG   S   F  G ++DVT
Sbjct: 61  KGSKSNKYANKPAEGHAKKADTAPKRFIREFRNVNVDE-YEVGQEVSVDTFETGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH        HG    HR+ GS G   D  RVFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMGHGSH-FHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           TV+NLEVV VD    +ILVKG VPG KK   + +  S K  
Sbjct: 179 TVQNLEVVQVDTDNSVILVKGNVPGPKKG-LVEITTSIKKG 218


>gi|78186070|ref|YP_374113.1| 50S ribosomal protein L3 [Chlorobium luteolum DSM 273]
 gi|109893534|sp|Q3B6G1|RL3_PELLD RecName: Full=50S ribosomal protein L3
 gi|78165972|gb|ABB23070.1| LSU ribosomal protein L3P [Chlorobium luteolum DSM 273]
          Length = 209

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 88/207 (42%), Positives = 123/207 (59%), Gaps = 1/207 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT +YN +   +P T++    C V   +  +K+GY AVQ+G GE K   V+KP
Sbjct: 4   ILGKKIGMTRLYNDKREAVPCTIIQAGPCFVTQVKNAEKDGYDAVQIGIGERKEHKVTKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M G +    V+P   + EF     D  L  GS  S   F  G++V+V G++ GKGF+G +
Sbjct: 64  MLGHYKKAGVTPGYMMAEFDASMFDVELAAGSPVSVESFKEGEIVNVLGVSKGKGFAGVV 123

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHNFGG   THG S   R+ GS G   DP R FK  +M GRMG + VTV+NL+VV +  
Sbjct: 124 KRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFKGTRMGGRMGSDNVTVRNLQVVKIMA 183

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
           +  LI+VKG VPG  KNS++ +    K
Sbjct: 184 ESNLIMVKGSVPGP-KNSYVKIVSIKK 209


>gi|258406185|ref|YP_003198927.1| 50S ribosomal protein L3 [Desulfohalobium retbaense DSM 5692]
 gi|257798412|gb|ACV69349.1| 50S ribosomal protein L3 [Desulfohalobium retbaense DSM 5692]
          Length = 209

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 88/203 (43%), Positives = 122/203 (60%), Gaps = 2/203 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +KLGMT V+  +G  IPVTV+    C V+  +T + +GY A+Q+GA       V+KP
Sbjct: 6   LIGKKLGMTRVFGEDGTVIPVTVIQAGPCPVIQVKTAETDGYTALQIGADPLPAHRVTKP 65

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
            +G  +       +KL E RV+   +  P G   S   FT+G+ +DVTG + G+GF+GAM
Sbjct: 66  QQGHQAKAGKGCFRKLQEVRVEDAAEYEP-GQELSVDMFTIGERIDVTGKSKGRGFAGAM 124

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR NFGG  +THG    HRS G+ G    P R+FK KKM G MG  RV+V+N EVV +  
Sbjct: 125 KRWNFGGSPSTHGHEKVHRSTGAVGQCAAPSRIFKGKKMPGHMGAQRVSVRNAEVVDIRP 184

Query: 185 KRGLILVKGCVPGAKKNSWILVR 207
           +  LIL++G VPG  KN  I +R
Sbjct: 185 EDNLILLRGQVPGP-KNGVITLR 206


>gi|269955435|ref|YP_003325224.1| 50S ribosomal protein L3 [Xylanimonas cellulosilytica DSM 15894]
 gi|269304116|gb|ACZ29666.1| ribosomal protein L3 [Xylanimonas cellulosilytica DSM 15894]
          Length = 217

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 89/211 (42%), Positives = 129/211 (61%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           + V+ +KLGMT +++  GR +PVTV+ +D   V   RT + +GY AVQ+  G+   + V+
Sbjct: 9   TAVLGKKLGMTQLWDEAGRLVPVTVVAVDTNVVTQVRTTETDGYSAVQLAVGQIDPRKVT 68

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +P++G F    V+P++ + E R   D     VG   + + F  G +VDV+G T GKG +G
Sbjct: 69  QPLKGHFEKAGVTPRRHVAEIR-TADASTYTVGQEITAAAFEAGAVVDVSGTTKGKGTAG 127

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    P RVFK  +MAGRMG  R T +NL V +V
Sbjct: 128 VMKRHGFAGVGASHGSHRNHRKPGSIGGASTPSRVFKGLRMAGRMGNARQTTQNLTVHAV 187

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+LVKG VPG  K   ++V+ + K A
Sbjct: 188 DAEKGLLLVKGAVPGP-KGGVVVVKTAAKGA 217


>gi|289548391|ref|YP_003473379.1| 50S ribosomal protein L3 [Thermocrinis albus DSM 14484]
 gi|289182008|gb|ADC89252.1| 50S ribosomal protein L3 [Thermocrinis albus DSM 14484]
          Length = 234

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 91/211 (43%), Positives = 125/211 (59%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT V+  +G  +PVTV+ ++   VV  R  +K+GY AVQVGA  AK KN
Sbjct: 1   MPIGLIGTKVGMTRVFLKDGTAVPVTVIKIEPNYVVAVRRQEKDGYNAVQVGAFPAKEKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119
           ++KP  G      + P ++L EFRV  D D   VG        F  G+LVDV G++ G+G
Sbjct: 61  LTKPELGHLKKAGLPPLRRLKEFRVD-DPDQYQVGQELRVEQIFQPGELVDVVGISKGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+GAMKR +FGG   +HG    HR+ GS G R DPGRV+K K+MAG  G   + V+ L V
Sbjct: 120 FAGAMKRWDFGGFPKSHG-HRYHRAVGSIGQRTDPGRVWKGKRMAGHWGAETIRVQALLV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           V V  +  L+LVKG VPG  +    + + + 
Sbjct: 179 VDVVPEENLLLVKGSVPGHNRGIVFVEKSTI 209


>gi|164663113|ref|XP_001732678.1| hypothetical protein MGL_0453 [Malassezia globosa CBS 7966]
 gi|159106581|gb|EDP45464.1| hypothetical protein MGL_0453 [Malassezia globosa CBS 7966]
          Length = 336

 Score =  245 bits (626), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 102/220 (46%), Positives = 143/220 (65%), Gaps = 7/220 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHR-----TLDKNGYMAVQVGAGE 55
           +R G++ RK GMT ++  +G R+P TVL++D+ QV +H      + D+  YMA+QV A +
Sbjct: 64  LRVGLITRKKGMTTMFMPDGTRVPATVLYVDSNQVSMHVQRDAPSQDEAPYMALQVAASD 123

Query: 56  AKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMT 115
           A+   VS P+RG  S   + PK+ + EFRV  D  +LP+G+  S ++F  GQ VDV  +T
Sbjct: 124 ARESAVSAPVRGHLSRAGLGPKRVIKEFRVTPD-AMLPIGTQLSAAHFVPGQDVDVRAIT 182

Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
            GKGF+G MKRHNF G  A+HG S++HR+ GS G  QDPGRV+  K+M GRMGG+  TV+
Sbjct: 183 RGKGFAGVMKRHNFAGGNASHGASLAHRTPGSVGNNQDPGRVWPGKRMPGRMGGHYRTVQ 242

Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           N+ V+ +D K  LI VKG VPG      + V+D+ KS V 
Sbjct: 243 NVRVLRIDVKNELIFVKGQVPGPD-GGVVFVQDALKSMVK 281


>gi|302849682|ref|XP_002956370.1| mitochondrial ribosomal protein L3 [Volvox carteri f. nagariensis]
 gi|300258276|gb|EFJ42514.1| mitochondrial ribosomal protein L3 [Volvox carteri f. nagariensis]
          Length = 428

 Score =  245 bits (626), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 96/209 (45%), Positives = 132/209 (63%), Gaps = 2/209 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R G +A K GMT  ++  G R+P+TVL +D CQVV  +T + +G  A+ +GAG  + K 
Sbjct: 151 LRVGCIATKAGMTQEWDEHGVRVPLTVLWIDECQVVGVKTHEVHGRTALMLGAGHKRQKC 210

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +S    GFF  V +  KK + E+ V +D  LLP+G+  + ++F  GQ VDVTG T  KGF
Sbjct: 211 MSPSQAGFFLKVGLPFKKLVAEWPVSED-ALLPMGTHITAAHFVAGQRVDVTGWTKYKGF 269

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G MKR  F G  A+HGVS+SHR+ G+ G RQDPG+V+K KK+ G MG  R TV +  V 
Sbjct: 270 QGVMKRWGFKGQPASHGVSLSHRAPGAIGNRQDPGKVWKGKKLPGCMGDERRTVHHCLVY 329

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            VD  R L+ ++G VPG K  S + +RDS
Sbjct: 330 KVDAARNLVYIRGQVPGPKGRS-VYLRDS 357


>gi|33866599|ref|NP_898158.1| 50S ribosomal protein L3 [Synechococcus sp. WH 8102]
 gi|42559596|sp|Q7U4K0|RL3_SYNPX RecName: Full=50S ribosomal protein L3
 gi|33633377|emb|CAE08582.1| 50S ribosomal protein L3 [Synechococcus sp. WH 8102]
          Length = 218

 Score =  245 bits (625), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 83/219 (37%), Positives = 129/219 (58%), Gaps = 4/219 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++ +GR +PVT++    C++   ++ D +GY AVQ+G G+ + K 
Sbjct: 1   MSIGILGKKLGMSQFFDEQGRAVPVTLIEAGPCRITQLKSSDTDGYAAVQIGFGDTREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G  +    +  + L E+RV   D    +G   +   F  GQ VDV+G TIG+GF
Sbjct: 61  INKPAKGHLNKTGETLLRHLREYRVDGLDG-FELGGSITVGDFEAGQKVDVSGDTIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRH F     THG S +HR  GS G    PGR++  K+MAGR GG ++T + L ++
Sbjct: 120 SGYQKRHGFSRGPMTHG-SKNHREPGSIGPGTTPGRIYPGKRMAGRYGGKKITTRGLTIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK-SAVNCKG 218
            VD +R L++VKG VPG    + + +R + +  A   KG
Sbjct: 179 KVDSERNLLVVKGSVPGKP-GALLNIRPALRVGAKPAKG 216


>gi|27468742|ref|NP_765379.1| 50S ribosomal protein L3 [Staphylococcus epidermidis ATCC 12228]
 gi|42559629|sp|Q8CRG0|RL3_STAES RecName: Full=50S ribosomal protein L3
 gi|27316290|gb|AAO05465.1|AE016750_70 50S ribosomal protein L3 [Staphylococcus epidermidis ATCC 12228]
          Length = 220

 Score =  245 bits (625), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 92/221 (41%), Positives = 122/221 (55%), Gaps = 11/221 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+QVG        
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60

Query: 54  -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
            G    K  +KP  G     + +PK+ + EFR    D+   +G   S   F  G ++DVT
Sbjct: 61  KGSKSNKYANKPAEGHAKKADTAPKRFIREFRNVNVDE-YELGQEVSVDTFETGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH  G     HG    HR+ GS G   D  +VFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQGRGPMAHGSH-FHRAPGSVGMASDASKVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           TV+NLEVV VD +  +ILVKG VPG KK   + +  S K  
Sbjct: 179 TVQNLEVVQVDTENSVILVKGNVPGPKKG-LVEITTSIKKG 218


>gi|189465418|ref|ZP_03014203.1| hypothetical protein BACINT_01771 [Bacteroides intestinalis DSM
           17393]
 gi|189437692|gb|EDV06677.1| hypothetical protein BACINT_01771 [Bacteroides intestinalis DSM
           17393]
          Length = 205

 Score =  245 bits (625), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 83/204 (40%), Positives = 124/204 (60%), Gaps = 4/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EG+ +P TV+    C V   ++++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKSVEKDGYAAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PKK L EF+  + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFNDATFVDVIGTSKGKGFQGV 120

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  + THG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
                L+L+KG VPG  K S +++
Sbjct: 181 LPDHNLLLIKGSVPGC-KGSIVII 203


>gi|298491398|ref|YP_003721575.1| 50S ribosomal protein L3 ['Nostoc azollae' 0708]
 gi|298233316|gb|ADI64452.1| 50S ribosomal protein L3 ['Nostoc azollae' 0708]
          Length = 211

 Score =  245 bits (625), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 82/211 (38%), Positives = 123/211 (58%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT +++  G  IPVTV+    C V   +T   +GY A+QVG G  K K 
Sbjct: 1   MSVGILGTKLGMTQIFDEAGVAIPVTVIQAGPCTVTQVKTKQTDGYCAIQVGYGVVKPKV 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P+ G  +  +    + L E+R     D   +G       F+ GQ+VDV G +IG+GF
Sbjct: 61  LNRPLLGHLAKSSAPALRHLNEYRTDASGD-YALGQELKADIFSAGQIVDVIGTSIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KR++FG    +HG S +HR+ GS G    PGRV+  K+MAGR+GG RVT++ L +V
Sbjct: 120 AGNQKRNHFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGTRVTIRKLTIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +D  R LIL+KG +PG    + + +  + K
Sbjct: 179 RLDADRNLILIKGAIPGKP-GALVNIVPTNK 208


>gi|304413145|ref|ZP_07394618.1| 50S ribosomal subunit protein L3 [Candidatus Regiella insecticola
           LSR1]
 gi|304283988|gb|EFL92381.1| 50S ribosomal subunit protein L3 [Candidatus Regiella insecticola
           LSR1]
          Length = 258

 Score =  245 bits (625), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 97/235 (41%), Positives = 133/235 (56%), Gaps = 26/235 (11%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           + G++ +KLGMT V+  EG  IPVTV+ ++  +V   + +  +GY AVQV  G+ K   +
Sbjct: 26  KMGLIGKKLGMTRVFTEEGVSIPVTVIEIEKNRVTQVKDIKTDGYCAVQVTTGQKKTSRL 85

Query: 62  SKPMRGFFS------------------------SVNVSPKKKLFEFRVQKDDDLLPVGSV 97
            KP RG F                            V+  + L+EFR+ +D   L  G  
Sbjct: 86  KKPQRGHFEGTKTIRSKRATLDNPEIIKEVLTSKDPVTAGRGLWEFRIAEDQKFLR-GEE 144

Query: 98  FSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRV 157
            +   F   + VDVTG + GKGF+G +KR NF    ATHG S+SHR+ GS G  Q PG+V
Sbjct: 145 ITVEIFADVKKVDVTGTSKGKGFAGVVKRWNFRTQDATHGNSLSHRAPGSIGQNQTPGKV 204

Query: 158 FKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           FK KKMAG +G  RVTV++L+VV VD KR L+LVKG VPGA   + I V+ + K+
Sbjct: 205 FKGKKMAGHLGDERVTVQSLDVVRVDAKRNLLLVKGAVPGATGGNLI-VKPAVKA 258


>gi|317153958|ref|YP_004122006.1| 50S ribosomal protein L3 [Desulfovibrio aespoeensis Aspo-2]
 gi|316944209|gb|ADU63260.1| 50S ribosomal protein L3 [Desulfovibrio aespoeensis Aspo-2]
          Length = 210

 Score =  245 bits (625), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 83/204 (40%), Positives = 121/204 (59%), Gaps = 2/204 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT ++  +G    VTV+    C V+  +T DK GY A+Q+G      + V+K
Sbjct: 6   GILGKKLGMTRIFKEDGSVCCVTVIEAGPCPVMQIKTQDKEGYNALQLGYDTIAERKVNK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G  +       + L EF + +  D   +G   +   F+ G+ V VTG + GKGF G 
Sbjct: 66  PLKGHMAKAGKDMYRHLREFPL-EGVDGYELGQEITVDIFSAGEKVKVTGTSKGKGFQGV 124

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF G RA+HG    HR  GS G    PGRV+KNKKM G+MG  RVT+ N+E+V V 
Sbjct: 125 MKRHNFSGSRASHGAEKVHRVPGSVGNATYPGRVWKNKKMPGQMGNARVTLSNVEIVDVR 184

Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207
            +  +++VKG VPG   N ++++R
Sbjct: 185 PEDNVLVVKGQVPGPN-NGFVMIR 207


>gi|295111422|emb|CBL28172.1| LSU ribosomal protein L3P [Synergistetes bacterium SGP1]
          Length = 207

 Score =  245 bits (625), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 92/201 (45%), Positives = 130/201 (64%), Gaps = 1/201 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT +++ EG+ + VTV+    C VV  RT ++NGY AV +G G  K   
Sbjct: 1   MGIGILGKKMGMTQIFDAEGQAVAVTVIAAGPCPVVAVRTPEQNGYSAVLLGFGAVKPHK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SKP++G F    V PK+ L EFR+ K  +   VG       F  G+ +DV+G++ GKGF
Sbjct: 61  LSKPVKGLFDKNKVEPKRTLREFRLDK-AEGYEVGQEIRVDLFEAGERIDVSGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR++FGG + +HG S+ HR  GS+G    PGRVF  K+M G MG ++VTVKNL V+
Sbjct: 120 AGVMKRYHFGGQQFSHGTSVEHRHGGSSGAISYPGRVFPGKRMPGHMGSDKVTVKNLTVM 179

Query: 181 SVDDKRGLILVKGCVPGAKKN 201
           +VD +  L+LVKG VPGAK  
Sbjct: 180 AVDLENNLLLVKGAVPGAKDG 200


>gi|42559703|sp|Q9PE76|RL3_XYLFA RecName: Full=50S ribosomal protein L3
          Length = 215

 Score =  245 bits (625), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 100/211 (47%), Positives = 129/211 (61%), Gaps = 2/211 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
             G V RK GM+ V+  +G  IPVT++     +VV  +T D +GY AVQV  G  +   V
Sbjct: 5   SMGFVGRKAGMSRVFLEDGCSIPVTLIEATANRVVQIKTSDVDGYDAVQVTVGSRRSVLV 64

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +KP  G F+   V   + L+EFRV+K       VGS    S F VGQ VD+ G+T GKGF
Sbjct: 65  NKPESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGF 124

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRHNF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  R +V+NLEVV
Sbjct: 125 QGTIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEVV 184

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +D +R LI V+G +PGA     +L+R + K
Sbjct: 185 KIDVERCLIAVRGAIPGASGGD-VLIRSASK 214


>gi|160872579|ref|ZP_02062711.1| ribosomal protein L3 [Rickettsiella grylli]
 gi|159121378|gb|EDP46716.1| ribosomal protein L3 [Rickettsiella grylli]
          Length = 223

 Score =  245 bits (625), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 86/217 (39%), Positives = 130/217 (59%), Gaps = 6/217 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK GMT +Y   G  IPVT++ +   +VV  +T +++GY ++QV  G+     
Sbjct: 1   MTMGLIGRKCGMTQLYAENGTVIPVTLIEIQPNRVVQIKTKERDGYESIQVTTGKKLSSR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLL----PVGSVFSPS-YFTVGQLVDVTGMT 115
           ++K   G F+   V P   L+E R+ ++D        +G   +    F +G  VDVTG  
Sbjct: 61  LNKAEAGHFAKAAVEPGINLWELRITEEDHEFLKGISLGMEMTIDKLFKLGTYVDVTGTN 120

Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
            GKGF+G +KR++F    ATHG S+SHR+ GS G RQ PGRVFK KKM G++G  R TV+
Sbjct: 121 KGKGFAGVVKRYHFSTQDATHGNSLSHRAPGSIGQRQSPGRVFKGKKMCGQLGNRRCTVQ 180

Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +LE+V +D +R L+ +KG VPGA     ++V+ + + 
Sbjct: 181 SLEIVRIDTERHLLHIKGAVPGAPGGQ-VIVKQAVRK 216


>gi|251812047|ref|ZP_04826520.1| 50S ribosomal protein L3 [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875342|ref|ZP_06284215.1| 50S ribosomal protein L3 [Staphylococcus epidermidis SK135]
 gi|293368433|ref|ZP_06615057.1| 50S ribosomal protein L3 [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|251804381|gb|EES57038.1| 50S ribosomal protein L3 [Staphylococcus epidermidis BCM-HMP0060]
 gi|281296107|gb|EFA88628.1| 50S ribosomal protein L3 [Staphylococcus epidermidis SK135]
 gi|291317391|gb|EFE57813.1| 50S ribosomal protein L3 [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329731174|gb|EGG67544.1| 50S ribosomal protein L3 [Staphylococcus epidermidis VCU144]
 gi|329736435|gb|EGG72703.1| 50S ribosomal protein L3 [Staphylococcus epidermidis VCU028]
 gi|329736982|gb|EGG73237.1| 50S ribosomal protein L3 [Staphylococcus epidermidis VCU045]
          Length = 220

 Score =  245 bits (625), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 93/221 (42%), Positives = 122/221 (55%), Gaps = 11/221 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+QVG        
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60

Query: 54  -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
            G    K  +KP  G     + +PK+ + EFR    D+   VG   S   F  G ++DVT
Sbjct: 61  KGSKSNKYANKPAEGHAKKADTAPKRFIREFRNVNVDE-YEVGQEVSVDTFETGDIIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH  G     HG    HR+ GS G   D  +VFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQGRGPMAHGSH-FHRAPGSVGMASDASKVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           TV+NLEVV VD +  +ILVKG VPG KK   + +  S K  
Sbjct: 179 TVQNLEVVQVDTENSVILVKGNVPGPKKG-LVEITTSIKKG 218


>gi|326799127|ref|YP_004316946.1| 50S ribosomal protein L3 [Sphingobacterium sp. 21]
 gi|326549891|gb|ADZ78276.1| 50S ribosomal protein L3 [Sphingobacterium sp. 21]
          Length = 205

 Score =  245 bits (625), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 87/205 (42%), Positives = 126/205 (61%), Gaps = 4/205 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++ EG+ IP TV+    C V   RT++ +GY A+Q+   E K KN +
Sbjct: 2   SGIIGKKVGMTSIFDAEGKNIPCTVIEAGPCVVTQIRTVENDGYTAIQLAFDEKKEKNTT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
             ++G F+  N +PK+KL EF V    +   +G V +   F  G  +DV G + GKGF G
Sbjct: 62  ASLKGHFAKANTTPKRKLVEFEVFP--EEKNLGDVVTVDIFAEGDYIDVVGTSKGKGFQG 119

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG    THG     R+ GS G    P RVFK  +MAGR GG+RV V+NL+V+ 
Sbjct: 120 VVKRHGFGGVGGQTHGQHNRMRAPGSLGASSWPSRVFKGMRMAGRTGGDRVKVQNLQVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           V  ++ L++V G VPGA K S+++V
Sbjct: 180 VYPEKNLLVVSGSVPGA-KGSYVIV 203


>gi|226293678|gb|EEH49098.1| 54S ribosomal protein L9 [Paracoccidioides brasiliensis Pb18]
          Length = 295

 Score =  245 bits (625), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 97/215 (45%), Positives = 138/215 (64%), Gaps = 3/215 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+GV+A K GMT +++   G+R P T+L LD  QV+ H+TL K+GY AVQVG G    +
Sbjct: 72  LRTGVLAIKKGMTAIFDQETGKRTPCTILQLDQVQVISHKTLKKHGYFAVQVGCGWKHER 131

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            V++PM G F++  V+PK+ + EFRV+ +  LLP+G V +  +F  GQ VD    + G G
Sbjct: 132 AVTRPMLGHFAANGVAPKRHIHEFRVKDESGLLPIGEVINADWFQEGQFVDARSNSRGMG 191

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F G MKRH F G   +HGVS++HRS GS G  Q  G RV   KKMAG MG  +VT++NL 
Sbjct: 192 FEGVMKRHGFHGQDRSHGVSLAHRSLGSAGPSQGGGSRVHPGKKMAGNMGNEQVTLQNLR 251

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V+ VD ++G+++V G V G  K   + ++D+ K  
Sbjct: 252 VLKVDAEKGIVVVNGSVSGP-KGCIVKLQDAIKKP 285


>gi|299830377|ref|YP_003734592.1| ribosomal protein L3 [Kryptoperidinium foliaceum]
 gi|297385079|gb|ADI40377.1| ribosomal protein L3 [Kryptoperidinium foliaceum]
          Length = 208

 Score =  245 bits (625), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 83/206 (40%), Positives = 120/206 (58%), Gaps = 2/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT +++  G  IPVT+L +  C +   +T  K+GY A+QVG      K+
Sbjct: 1   MSVGLLGNKIGMTQIFDETGNIIPVTILKVGPCTITQVKTEAKDGYNAIQVGYSNVSNKS 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G     N+ P K L EFRV  D +   VG   +   F+ GQ V++ G TIGKGF
Sbjct: 61  LTQPELGHLQKSNIQPLKYLKEFRVNSDHE-FEVGQSLTLDLFSSGQFVNIQGKTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRHNF     THG S +HR+ GS G    PGRV   KKMAG++G    TVK L+VV
Sbjct: 120 AGLQKRHNFTRGPMTHG-SKNHRAPGSIGMGTTPGRVLPGKKMAGQLGNKITTVKKLKVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
            ++ +  ++++KG VPG   N   ++
Sbjct: 179 QLNLEENILVIKGSVPGKPGNLLTII 204


>gi|194334861|ref|YP_002016721.1| 50S ribosomal protein L3 [Prosthecochloris aestuarii DSM 271]
 gi|226730548|sp|B4S5M7|RL3_PROA2 RecName: Full=50S ribosomal protein L3
 gi|194312679|gb|ACF47074.1| ribosomal protein L3 [Prosthecochloris aestuarii DSM 271]
          Length = 209

 Score =  245 bits (625), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 86/202 (42%), Positives = 119/202 (58%), Gaps = 1/202 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT +YN +   +P TV+    C V   +T D +GY A Q+  GE K   VSKP
Sbjct: 4   ILGKKIGMTRIYNEKREAVPCTVIQAAPCFVSQVKTSDNDGYEAYQLSIGERKEAKVSKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           MRG ++   ++P  K+ EF     D  L +GS  S   F  G  VDV G+T GKGF+G +
Sbjct: 64  MRGHYAKAGITPGYKIAEFGKDLMDADLELGSSVSVDMFKEGDKVDVRGVTKGKGFAGVV 123

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHNF G   THG S   R+ GS G   DP R FK  +MAGRMG   V V+ L++V +  
Sbjct: 124 KRHNFAGGSRTHGQSDRLRAPGSVGGSSDPSRTFKGMRMAGRMGSKNVKVRGLQIVKIIP 183

Query: 185 KRGLILVKGCVPGAKKNSWILV 206
           +  L+++KG VPG  KNS++ +
Sbjct: 184 ESNLLVIKGSVPGV-KNSYVEI 204


>gi|294790411|ref|ZP_06755569.1| 50S ribosomal protein L3 [Scardovia inopinata F0304]
 gi|294458308|gb|EFG26661.1| 50S ribosomal protein L3 [Scardovia inopinata F0304]
          Length = 216

 Score =  245 bits (625), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 84/211 (39%), Positives = 118/211 (55%), Gaps = 2/211 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R  +V +KLGM+ V++  G  +PVT++ +    +   +T + +GY AVQ+G G      V
Sbjct: 7   RKALVGKKLGMSQVWDDNGFFVPVTLVDVSTNIITAVKTDETDGYKAVQLGYGAIDPTKV 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+ G F+   V+P++ L E R +  D   P G       F  GQ VDVTG T GKGF+
Sbjct: 67  TKPLAGHFAKAGVTPRRHLVEVRTEDADSFEP-GQELPVDTFADGQRVDVTGTTKGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F   R THG   + R  GS G    P R+ K K+MAGRMG N  T + L VVS
Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGNNTHTTQGLTVVS 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +   G++ +KG VPG  K + +LVR + K 
Sbjct: 186 SNVDSGILAIKGAVPGP-KGAIVLVRSAVKG 215


>gi|126657988|ref|ZP_01729140.1| 50S ribosomal protein L3 [Cyanothece sp. CCY0110]
 gi|126620626|gb|EAZ91343.1| 50S ribosomal protein L3 [Cyanothece sp. CCY0110]
          Length = 212

 Score =  245 bits (625), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 84/211 (39%), Positives = 119/211 (56%), Gaps = 4/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT ++  E G  IPVTV+    C +   +T + +GY A+Q+G  E + K
Sbjct: 1   MAVGLLGTKLGMTQIFEEESGLAIPVTVVQAGPCTITQIKTAETDGYTAIQIGYLEVREK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           N++KP  G       SP + L E+RV +D     +G       F  G LVD+ G ++G+G
Sbjct: 61  NLTKPELGHLKKAEASPLRHLKEYRV-EDTASYTLGEAVKADIFNAGDLVDIAGTSMGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G  KRHNF     THG S +HR  GSTG    PGRV+  KKMAG+ G    T ++LEV
Sbjct: 120 FAGYQKRHNFKRGSMTHG-SKNHRLPGSTGAGTTPGRVYPGKKMAGQYGAVTTTTRHLEV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           V VD +R L+L++G VPG      + +  + 
Sbjct: 179 VKVDAERNLLLIRGAVPGKP-GGLLNITPAK 208


>gi|149371629|ref|ZP_01891045.1| 50S ribosomal protein L3 [unidentified eubacterium SCB49]
 gi|149355256|gb|EDM43816.1| 50S ribosomal protein L3 [unidentified eubacterium SCB49]
          Length = 203

 Score =  245 bits (625), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 81/206 (39%), Positives = 121/206 (58%), Gaps = 6/206 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ RK+GMT +++  G+ +P TV+    C V   RT + +GY A+Q+G  + K   V+
Sbjct: 2   SGLIGRKIGMTSIFDENGKNLPCTVIECGPCVVTQVRTEEVDGYAALQLGFDDKKA--VN 59

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G         K+K+ EF+    D+   +G   +  +F  G  VDV G + GKGF G
Sbjct: 60  KAAEGHAKKAGTVAKRKVVEFKGF--DEEYKLGDTITVEHFAEGDFVDVAGTSKGKGFQG 117

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG  +ATHG     R+ GS G    P RVFK  +MAG+MG  +V V+NL V+ 
Sbjct: 118 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGQMGNEKVKVQNLRVLK 177

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L++VKGCVPG  KN+++ ++
Sbjct: 178 VVAEKNLLVVKGCVPG-HKNAYVTIQ 202


>gi|90962406|ref|YP_536322.1| 50S ribosomal protein L3 [Lactobacillus salivarius UCC118]
 gi|227891544|ref|ZP_04009349.1| 50S ribosomal protein L3 [Lactobacillus salivarius ATCC 11741]
 gi|123269876|sp|Q1WS90|RL3_LACS1 RecName: Full=50S ribosomal protein L3
 gi|90821600|gb|ABE00239.1| LSU ribosomal protein L3P [Lactobacillus salivarius UCC118]
 gi|227866691|gb|EEJ74112.1| 50S ribosomal protein L3 [Lactobacillus salivarius ATCC 11741]
 gi|300215031|gb|ADJ79447.1| 50S ribosomal protein L3 [Lactobacillus salivarius CECT 5713]
          Length = 207

 Score =  244 bits (624), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 79/210 (37%), Positives = 120/210 (57%), Gaps = 5/210 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
             G++ +K+GMT V+   G  +PVTV+ +D+  V+  +T++ +GY A+Q+G  + +    
Sbjct: 3   TKGILGKKVGMTQVFTENGELVPVTVVKVDSNVVLQVKTMENDGYEAIQLGFDDLREVLT 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP +G  +  N +PK+ + E R   +     VG       F  G  VDVTG + G GF 
Sbjct: 63  NKPAKGHAAKANTTPKRFVREIR-DVELGEYKVGDEVKADIFEAGDFVDVTGTSKGHGFQ 121

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G++KR+        HG S  HR  GS G      RV K K + GRMGGNRVT++NLE+V 
Sbjct: 122 GSIKRNGQHRGPMAHG-SRYHRRPGSMGVI--INRVMKGKLLPGRMGGNRVTIQNLEIVK 178

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            D + G++L+KG VPGA K S + ++ + K
Sbjct: 179 ADTENGVLLIKGNVPGANK-SLVTIKSTVK 207


>gi|319944795|ref|ZP_08019059.1| 50S ribosomal protein L3 [Lautropia mirabilis ATCC 51599]
 gi|319742044|gb|EFV94467.1| 50S ribosomal protein L3 [Lautropia mirabilis ATCC 51599]
          Length = 217

 Score =  244 bits (624), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 82/206 (39%), Positives = 120/206 (58%), Gaps = 2/206 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           M  ++  +G  IPVTV+ +   +V   ++++K+GY AVQ+  GE +   V+    G ++ 
Sbjct: 1   MMRIFTDDGESIPVTVIDVSGNRVSQVKSVEKDGYSAVQLVYGERRASRVNAAEAGHYAK 60

Query: 72  VNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
             V       EF V  +    +P G+V    +F VGQ +DV G + GKGF+G +KRHNFG
Sbjct: 61  AGVQAGTVAAEFHVSPERAAEVPAGTVLGADHFVVGQYIDVQGTSQGKGFAGTIKRHNFG 120

Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
             RA+HG S SHR  GS G  QDPGRVF  ++M+G+MG    TV+NL V  +D +RGL+L
Sbjct: 121 SQRASHGNSRSHRVPGSIGMAQDPGRVFPGQRMSGQMGNVTRTVQNLVVERIDTERGLLL 180

Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNC 216
           V+G VPG+     + +  S K  +  
Sbjct: 181 VRGAVPGSAGGHLV-ITPSVKRRLKP 205


>gi|16329941|ref|NP_440669.1| 50S ribosomal protein L3 [Synechocystis sp. PCC 6803]
 gi|2500229|sp|P73320|RL3_SYNY3 RecName: Full=50S ribosomal protein L3
 gi|1652427|dbj|BAA17349.1| 50S ribosomal protein L3 [Synechocystis sp. PCC 6803]
          Length = 213

 Score =  244 bits (624), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 86/211 (40%), Positives = 121/211 (57%), Gaps = 4/211 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT +++   G  IPVTV+    C V   +T D +GY A+QVG    K K
Sbjct: 1   MSIGILGTKLGMTQIFDQESGISIPVTVVQAGPCPVTQVKTQDTDGYNAIQVGFLPVKEK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            +SKP  G     N  P + L E+R+    +L P G   +   F  G LVDV G ++G+G
Sbjct: 61  ALSKPELGHLKKSNTDPMRHLKEYRLTDAPNLQP-GDAVTADIFQAGDLVDVAGQSMGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G  KRHNF     THG S +HR  GSTG    PGRV+  K+MAG+ G ++VTV+ L V
Sbjct: 120 FAGYQKRHNFRRGNMTHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGQYGASQVTVRRLTV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           V VD +R L+++KG +PG    + + +  + 
Sbjct: 179 VRVDAERNLLIIKGALPGKP-GTLLNITPAK 208


>gi|325288578|ref|YP_004264759.1| LSU ribosomal protein L3P [Syntrophobotulus glycolicus DSM 8271]
 gi|324963979|gb|ADY54758.1| LSU ribosomal protein L3P [Syntrophobotulus glycolicus DSM 8271]
          Length = 209

 Score =  244 bits (624), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 89/210 (42%), Positives = 127/210 (60%), Gaps = 3/210 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++  +G+ IPVTV+    C V+  +T   +GY A+QVG  E + + 
Sbjct: 1   MSKGILGKKIGMTQIFLEDGKLIPVTVVEAGPCYVLQKKTQASDGYNAIQVGFSEIRERL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP  G F  V+V P + + EFR   D +   +G   +   F+ G  +DV G + GKGF
Sbjct: 61  VNKPKLGHFKKVDVKPSRFIREFRTD-DVESFEIGQTINADVFSTGDKIDVVGTSRGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH        HG    HR+ GS G +  P RVFK +++ GR+GG RVTV+NLE+V
Sbjct: 120 AGMHKRHGGRRGPMGHGSKYHHRT-GSMGAKG-PARVFKGRELPGRLGGERVTVQNLEIV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
            VD  + LIL+KGCVPGAKK+  IL + S 
Sbjct: 178 RVDADKNLILIKGCVPGAKKSLLILKKTSK 207


>gi|71902234|ref|ZP_00684241.1| Ribosomal protein L3 [Xylella fastidiosa Ann-1]
 gi|71728008|gb|EAO30222.1| Ribosomal protein L3 [Xylella fastidiosa Ann-1]
          Length = 215

 Score =  244 bits (624), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 100/211 (47%), Positives = 129/211 (61%), Gaps = 2/211 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
             G V RK GM+ V+  +G  IPVT++     +VV  +T D +GY AVQV  G  +   V
Sbjct: 5   SMGFVGRKAGMSRVFLEDGCSIPVTLIEATANRVVQIKTSDVDGYDAVQVTVGSRRSVLV 64

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +KP  G F+   V   + L+EFRV+K       VGS    S F VGQ VD+ G+T GKGF
Sbjct: 65  NKPESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGF 124

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRHNF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  R +V+NLEV+
Sbjct: 125 QGTIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEVI 184

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +D +R LI V+G VPGA     +L+R + K
Sbjct: 185 KIDVERCLIAVRGAVPGASGGD-VLIRSASK 214


>gi|146298161|ref|YP_001192752.1| 50S ribosomal protein L3 [Flavobacterium johnsoniae UW101]
 gi|189042844|sp|A5FMY1|RL3_FLAJO RecName: Full=50S ribosomal protein L3
 gi|146152579|gb|ABQ03433.1| 50S ribosomal protein L3 [Flavobacterium johnsoniae UW101]
          Length = 205

 Score =  244 bits (624), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 84/206 (40%), Positives = 124/206 (60%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C V   RT + +GY A+Q+G  +   K+ +
Sbjct: 2   SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTNEVDGYEALQLGFDDKNEKHST 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F       KKK+ EF+         +G +   S F  G+ VDV G++ GKGF G
Sbjct: 62  KAALGHFKKAGTVAKKKVVEFQ--DFATEQKLGDLIDVSIFEEGEFVDVQGVSKGKGFQG 119

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG  +ATHG     R+ GS G    P RVFK  +MAGRMGG+ V V+NL V+ 
Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGGDNVKVQNLRVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L++VKGC+PG  KNS+++++
Sbjct: 180 VVAEKNLLVVKGCIPG-HKNSYVIIQ 204


>gi|229821623|ref|YP_002883149.1| ribosomal protein L3 [Beutenbergia cavernae DSM 12333]
 gi|229567536|gb|ACQ81387.1| ribosomal protein L3 [Beutenbergia cavernae DSM 12333]
          Length = 220

 Score =  244 bits (624), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 84/211 (39%), Positives = 128/211 (60%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           + ++  KLGMT V++  GR +PVTV+ +    V   RT + +GY AVQ+  G+   + V+
Sbjct: 12  TALLGTKLGMTQVWDDAGRLVPVTVVQVGTNVVSAVRTPETDGYSAVQLAFGQIDPRKVT 71

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +P++G F+   V+P++ + E R     +  P G   +   F  GQ VDV G T GKG +G
Sbjct: 72  QPLKGHFAKAGVTPRRHVAEIRTGDAAEYTP-GQELTVEVFAAGQGVDVVGTTKGKGTAG 130

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G+ A+HG   +HR  GS G    P RVF+  +MAGRMG +R TV+NL++ +V
Sbjct: 131 VMKRHGFSGVGASHGAHRNHRKAGSIGGASTPSRVFRGLRMAGRMGNDRHTVQNLKIHAV 190

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+LV G +PG  +   ++V+ + K A
Sbjct: 191 DAEKGLLLVTGALPGP-RGGLVVVKTASKEA 220


>gi|88803750|ref|ZP_01119274.1| 50S ribosomal protein L3 [Polaribacter irgensii 23-P]
 gi|88780483|gb|EAR11664.1| 50S ribosomal protein L3 [Polaribacter irgensii 23-P]
          Length = 205

 Score =  244 bits (624), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 82/206 (39%), Positives = 129/206 (62%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ RK+GMT +++  G+ IP TV+    C V   RT++ +GY A+Q+G  +   K+ +
Sbjct: 2   SGLIGRKIGMTSLFDENGKNIPCTVIEAGPCVVTQVRTIEVDGYSALQLGFDDKTAKSSN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K + G F       KKK+ EF+  +  ++  +G   S ++F  G+ VDV+G++ GKGF G
Sbjct: 62  KALDGHFKKAGSVAKKKVVEFQGFE--EVYKLGDSISVAHFEEGEFVDVSGVSKGKGFQG 119

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH F G  +ATHG     R+ GS G    P RVFK  +MAGRMGG++V V+NL V+ 
Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGDKVKVQNLRVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L++VKG +PG  KN+++ ++
Sbjct: 180 VVAEKNLLVVKGAIPG-HKNAFVTIQ 204


>gi|225678845|gb|EEH17129.1| 50S ribosomal protein L3 [Paracoccidioides brasiliensis Pb03]
          Length = 295

 Score =  244 bits (624), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 97/215 (45%), Positives = 138/215 (64%), Gaps = 3/215 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+GV+A K GMT +++   G+R P T+L LD  QV+ H+TL K+GY AVQVG G    +
Sbjct: 72  LRTGVLAIKKGMTAIFDQETGKRTPCTILQLDQVQVISHKTLKKHGYFAVQVGCGWKHER 131

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            V++PM G F++  V+PK+ + EFRV+ +  LLP+G V +  +F  GQ VD    + G G
Sbjct: 132 AVTRPMLGHFAANGVAPKRHIHEFRVKDESGLLPIGEVINADWFQEGQFVDARSNSRGMG 191

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F G MKRH F G   +HGVS++HRS GS G  Q  G RV   KKMAG MG  +VT++NL 
Sbjct: 192 FEGVMKRHGFHGQDRSHGVSLAHRSLGSAGPSQGGGSRVHPGKKMAGNMGNEQVTLQNLR 251

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V+ VD ++G+++V G V G  K   + ++D+ K  
Sbjct: 252 VLKVDAEKGIVVVNGSVSGP-KGCIVKLQDAIKKP 285


>gi|225010517|ref|ZP_03700988.1| ribosomal protein L3 [Flavobacteria bacterium MS024-3C]
 gi|225005346|gb|EEG43297.1| ribosomal protein L3 [Flavobacteria bacterium MS024-3C]
          Length = 205

 Score =  244 bits (624), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 85/205 (41%), Positives = 121/205 (59%), Gaps = 4/205 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ RK+GMT +++  G+ IP TV+    C V   RT + +GY A+Q+G  +   K+V+
Sbjct: 2   SGLIGRKIGMTSIFDENGKNIPCTVIETGPCTVTQVRTEEVDGYNALQLGFDDKAEKHVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F    VS K+K+ EFR  + D    +G       F  G+ VD+   + GKGF G
Sbjct: 62  KAAAGHFKKAGVSAKRKVVEFRDFEGD--YKLGDTIGVDLFVEGEFVDIAANSKGKGFQG 119

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH F G  +ATHG     R+ GS G    P RVFK  KMAGRMGG RV+  NL ++ 
Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGRMGGVRVSALNLRILK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           V  ++ L++VKGCVPG  KN+++ +
Sbjct: 180 VVPEKNLLVVKGCVPG-HKNAYVTI 203


>gi|15925240|ref|NP_372774.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927830|ref|NP_375363.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus N315]
 gi|21283898|ref|NP_646986.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MW2]
 gi|49484466|ref|YP_041690.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49487032|ref|YP_044253.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|82751839|ref|YP_417580.1| 50S ribosomal protein L3 [Staphylococcus aureus RF122]
 gi|87161988|ref|YP_494839.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88196162|ref|YP_500979.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|150394755|ref|YP_001317430.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus JH1]
 gi|151222364|ref|YP_001333186.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156980565|ref|YP_001442824.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus Mu3]
 gi|161353538|ref|YP_187049.2| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus COL]
 gi|221140148|ref|ZP_03564641.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253317010|ref|ZP_04840223.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253729916|ref|ZP_04864081.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253734341|ref|ZP_04868506.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|255007030|ref|ZP_05145631.2| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257423735|ref|ZP_05600164.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257426413|ref|ZP_05602815.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257429052|ref|ZP_05605439.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus 68-397]
 gi|257431698|ref|ZP_05608061.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257434659|ref|ZP_05610710.1| LSU ribosomal protein L3 [Staphylococcus aureus subsp. aureus M876]
 gi|257794596|ref|ZP_05643575.1| 50S ribosomal protein L3 [Staphylococcus aureus A9781]
 gi|258408802|ref|ZP_05681086.1| 50S ribosomal protein L3 [Staphylococcus aureus A9763]
 gi|258422401|ref|ZP_05685313.1| LSU ribosomal protein L3 [Staphylococcus aureus A9719]
 gi|258422697|ref|ZP_05685602.1| LSU ribosomal protein L3 [Staphylococcus aureus A9635]
 gi|258439790|ref|ZP_05690536.1| 50S ribosomal protein L3 [Staphylococcus aureus A9299]
 gi|258442654|ref|ZP_05691214.1| 50S ribosomal protein L3 [Staphylococcus aureus A8115]
 gi|258446647|ref|ZP_05694802.1| 50S ribosomal protein L3 [Staphylococcus aureus A6300]
 gi|258450235|ref|ZP_05698327.1| 50S ribosomal protein L3 [Staphylococcus aureus A6224]
 gi|258450755|ref|ZP_05698814.1| 50S ribosomal protein L3 [Staphylococcus aureus A5948]
 gi|258455393|ref|ZP_05703353.1| ribosomal protein L3 [Staphylococcus aureus A5937]
 gi|262048514|ref|ZP_06021398.1| 50S ribosomal protein L3 [Staphylococcus aureus D30]
 gi|262052039|ref|ZP_06024250.1| 50S ribosomal protein L3 [Staphylococcus aureus 930918-3]
 gi|269203883|ref|YP_003283152.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ED98]
 gi|282893688|ref|ZP_06301920.1| 50S ribosomal protein L3 [Staphylococcus aureus A8117]
 gi|282902153|ref|ZP_06310046.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C160]
 gi|282906593|ref|ZP_06314441.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282909563|ref|ZP_06317374.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911810|ref|ZP_06319606.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282915099|ref|ZP_06322876.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus M899]
 gi|282917595|ref|ZP_06325347.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus D139]
 gi|282920825|ref|ZP_06328543.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C427]
 gi|282922119|ref|ZP_06329815.1| 50S ribosomal protein L3 [Staphylococcus aureus A9765]
 gi|282925730|ref|ZP_06333378.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C101]
 gi|282926796|ref|ZP_06334423.1| 50S ribosomal protein L3 [Staphylococcus aureus A10102]
 gi|283959028|ref|ZP_06376469.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|284025276|ref|ZP_06379674.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus 132]
 gi|293497503|ref|ZP_06665357.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293511078|ref|ZP_06669775.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus M809]
 gi|293549684|ref|ZP_06672356.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus M1015]
 gi|294848783|ref|ZP_06789528.1| 50S ribosomal protein L3 [Staphylococcus aureus A9754]
 gi|295404926|ref|ZP_06814739.1| 50S ribosomal protein L3 [Staphylococcus aureus A8819]
 gi|295428833|ref|ZP_06821457.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296275959|ref|ZP_06858466.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MR1]
 gi|297209937|ref|ZP_06926333.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297243984|ref|ZP_06927874.1| 50S ribosomal protein L3 [Staphylococcus aureus A8796]
 gi|297589681|ref|ZP_06948322.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MN8]
 gi|300910949|ref|ZP_07128399.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|304379434|ref|ZP_07362169.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|42559569|sp|P60448|RL3_STAAM RecName: Full=50S ribosomal protein L3
 gi|42559570|sp|P60449|RL3_STAAN RecName: Full=50S ribosomal protein L3
 gi|42559571|sp|P60450|RL3_STAAW RecName: Full=50S ribosomal protein L3
 gi|56749372|sp|Q6G771|RL3_STAAS RecName: Full=50S ribosomal protein L3
 gi|56749401|sp|Q6GEI3|RL3_STAAR RecName: Full=50S ribosomal protein L3
 gi|109893558|sp|Q2FEN9|RL3_STAA3 RecName: Full=50S ribosomal protein L3
 gi|109893559|sp|Q2YYP6|RL3_STAAB RecName: Full=50S ribosomal protein L3
 gi|123291758|sp|Q2FW06|RL3_STAA8 RecName: Full=50S ribosomal protein L3
 gi|166234598|sp|A7X5G3|RL3_STAA1 RecName: Full=50S ribosomal protein L3
 gi|172049048|sp|A6QJ92|RL3_STAAE RecName: Full=50S ribosomal protein L3
 gi|189029483|sp|A6U3X5|RL3_STAA2 RecName: Full=50S ribosomal protein L3
 gi|13702050|dbj|BAB43342.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus N315]
 gi|14248023|dbj|BAB58412.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus Mu50]
 gi|21205340|dbj|BAB96034.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MW2]
 gi|49242595|emb|CAG41316.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49245475|emb|CAG43952.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|82657370|emb|CAI81811.1| 50S ribosomal protein L3 [Staphylococcus aureus RF122]
 gi|87127962|gb|ABD22476.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203720|gb|ABD31530.1| ribosomal protein L3, putative [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|149947207|gb|ABR53143.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus JH1]
 gi|150375164|dbj|BAF68424.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156722700|dbj|BAF79117.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus Mu3]
 gi|253726363|gb|EES95092.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253727658|gb|EES96387.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257272753|gb|EEV04855.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257276044|gb|EEV07495.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257279533|gb|EEV10120.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus 68-397]
 gi|257282577|gb|EEV12709.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257285255|gb|EEV15371.1| LSU ribosomal protein L3 [Staphylococcus aureus subsp. aureus M876]
 gi|257788568|gb|EEV26908.1| 50S ribosomal protein L3 [Staphylococcus aureus A9781]
 gi|257840485|gb|EEV64945.1| 50S ribosomal protein L3 [Staphylococcus aureus A9763]
 gi|257841832|gb|EEV66269.1| LSU ribosomal protein L3 [Staphylococcus aureus A9719]
 gi|257847108|gb|EEV71117.1| LSU ribosomal protein L3 [Staphylococcus aureus A9635]
 gi|257847566|gb|EEV71568.1| 50S ribosomal protein L3 [Staphylococcus aureus A9299]
 gi|257851775|gb|EEV75709.1| 50S ribosomal protein L3 [Staphylococcus aureus A8115]
 gi|257854715|gb|EEV77663.1| 50S ribosomal protein L3 [Staphylococcus aureus A6300]
 gi|257856327|gb|EEV79236.1| 50S ribosomal protein L3 [Staphylococcus aureus A6224]
 gi|257861538|gb|EEV84340.1| 50S ribosomal protein L3 [Staphylococcus aureus A5948]
 gi|257862604|gb|EEV85372.1| ribosomal protein L3 [Staphylococcus aureus A5937]
 gi|259160094|gb|EEW45127.1| 50S ribosomal protein L3 [Staphylococcus aureus 930918-3]
 gi|259163372|gb|EEW47930.1| 50S ribosomal protein L3 [Staphylococcus aureus D30]
 gi|262076173|gb|ACY12146.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ED98]
 gi|269941839|emb|CBI50249.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus TW20]
 gi|282312559|gb|EFB42963.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C101]
 gi|282315240|gb|EFB45624.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C427]
 gi|282318557|gb|EFB48915.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus D139]
 gi|282320820|gb|EFB51154.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus M899]
 gi|282323506|gb|EFB53822.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282326542|gb|EFB56844.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282329492|gb|EFB59013.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282591247|gb|EFB96320.1| 50S ribosomal protein L3 [Staphylococcus aureus A10102]
 gi|282593587|gb|EFB98580.1| 50S ribosomal protein L3 [Staphylococcus aureus A9765]
 gi|282596612|gb|EFC01571.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C160]
 gi|282763746|gb|EFC03874.1| 50S ribosomal protein L3 [Staphylococcus aureus A8117]
 gi|283471472|emb|CAQ50683.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus ST398]
 gi|283788620|gb|EFC27447.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|285817912|gb|ADC38399.1| 50S ribosomal protein L3 [Staphylococcus aureus 04-02981]
 gi|290918731|gb|EFD95807.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus M1015]
 gi|291096434|gb|EFE26692.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466065|gb|EFF08594.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus M809]
 gi|294824162|gb|EFG40586.1| 50S ribosomal protein L3 [Staphylococcus aureus A9754]
 gi|294969871|gb|EFG45889.1| 50S ribosomal protein L3 [Staphylococcus aureus A8819]
 gi|295127182|gb|EFG56824.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296885610|gb|EFH24547.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297178762|gb|EFH38007.1| 50S ribosomal protein L3 [Staphylococcus aureus A8796]
 gi|297578192|gb|EFH96905.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MN8]
 gi|298695506|gb|ADI98728.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           ED133]
 gi|300887929|gb|EFK83124.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|302333886|gb|ADL24079.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|302752123|gb|ADL66300.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304341966|gb|EFM07870.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312437339|gb|ADQ76410.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           TCH60]
 gi|312830599|emb|CBX35441.1| 50S ribosomal protein L3 (BL3) [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315129670|gb|EFT85661.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315193502|gb|EFU23898.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           CGS00]
 gi|315198220|gb|EFU28551.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320140212|gb|EFW32071.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320143482|gb|EFW35263.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329723366|gb|EGG59895.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           21172]
 gi|329730333|gb|EGG66723.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           21193]
 gi|329732084|gb|EGG68439.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           21189]
          Length = 220

 Score =  244 bits (624), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 94/221 (42%), Positives = 123/221 (55%), Gaps = 11/221 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY A+QVG        
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYK 60

Query: 54  -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
                 K  +KP  G     + +PK+ + EFR   D D   VG   S   F  G ++DVT
Sbjct: 61  KDAKSNKYANKPAEGHAKKADAAPKRFIREFR-NVDVDAYEVGQEVSVDTFVAGDVIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH       +HG    HR+ GS G   D  RVFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQSRGPMSHGSH-FHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           TV+NLEVV VD +  +ILVKG VPG KK   + +R S K  
Sbjct: 179 TVQNLEVVQVDTENKVILVKGNVPGPKKG-LVEIRTSIKKG 218


>gi|298531085|ref|ZP_07018486.1| 50S ribosomal protein L3 [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509108|gb|EFI33013.1| 50S ribosomal protein L3 [Desulfonatronospira thiodismutans ASO3-1]
          Length = 210

 Score =  244 bits (623), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 84/204 (41%), Positives = 119/204 (58%), Gaps = 1/204 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
             G++ +KLGMT V++ +G+ IPVTV+    C V+  +  DK+GY A+Q+G        +
Sbjct: 4   TIGLIGKKLGMTSVFSDDGKFIPVTVIQAGPCPVIQKKDQDKDGYSAIQIGYDSMPGHKL 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP+RG  +       +KL EF  +  ++  P G   +   F  G  + +TG + GKGF+
Sbjct: 64  NKPVRGHQAKAGKGFFRKLTEFSPENVEEFEP-GQELNVEIFKPGDRIKLTGTSKGKGFA 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR NF GL  THG    HRS G+ G   DPG+VFK KKM GRMG   V+ KN E++S
Sbjct: 123 GVMKRWNFRGLPRTHGHEKVHRSPGAIGQCADPGKVFKGKKMPGRMGNKTVSYKNAEIIS 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWIL 205
           V  +  +ILVKG VPG +    +L
Sbjct: 183 VRTQDNVILVKGQVPGPRNGYVVL 206


>gi|220906719|ref|YP_002482030.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 7425]
 gi|254803669|sp|B8HMQ4|RL3_CYAP4 RecName: Full=50S ribosomal protein L3
 gi|219863330|gb|ACL43669.1| ribosomal protein L3 [Cyanothece sp. PCC 7425]
          Length = 212

 Score =  244 bits (623), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 86/209 (41%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT +++ E R IPVTV+    C +   +T   +GY A+QV  GE + K+
Sbjct: 1   MAVGILGTKLGMTQIFDQERRAIPVTVVQAGPCPITQIKTKQTDGYAAIQVAFGEVRAKS 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SK   G  +  N +P + L E+R   + D   VG V     F+ GQ+VDVTG +IG+GF
Sbjct: 61  LSKAELGHLAKSNTAPMRHLHEYR-TGEVDQFQVGQVLKADLFSAGQVVDVTGTSIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRHNF      HG S +HR  GSTG    PGRV+  K+MAG++G  R T++ L +V
Sbjct: 120 AGYQKRHNFKRGPMAHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGQLGSARTTIRQLTIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            VD +R L+L+KG VPG    + + +  +
Sbjct: 179 RVDPERNLVLIKGAVPGKP-GALVSITPA 206


>gi|158317791|ref|YP_001510299.1| ribosomal protein L3 [Frankia sp. EAN1pec]
 gi|226725178|sp|A8LC56|RL3_FRASN RecName: Full=50S ribosomal protein L3
 gi|158113196|gb|ABW15393.1| ribosomal protein L3 [Frankia sp. EAN1pec]
          Length = 236

 Score =  244 bits (623), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 93/205 (45%), Positives = 123/205 (60%), Gaps = 2/205 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      V   +T D +GY AVQ+G GE   + ++K
Sbjct: 8   GLLGTKLGMTQVWDANNRVVPVTVIQAGPNVVTQVKTPDSDGYSAVQLGYGEIDPRRINK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           PMRG F +   +P++ L E R     +  P G   +   F  GQ+VDVTG + GKGF+G 
Sbjct: 68  PMRGHFETSGATPRRHLVELRTADAGNYRP-GQQLTGEVFDAGQVVDVTGTSKGKGFAGV 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GL A HGV   HRS GS G    PGRVFK  +MAGRMG +RVTV  L + +VD
Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGHDRVTVAGLTIHAVD 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRD 208
            +RG +L+KG +PG      + VR 
Sbjct: 187 TERGFLLIKGAIPGPD-GGLVFVRS 210


>gi|170729700|ref|YP_001775133.1| 50S ribosomal protein L3 [Xylella fastidiosa M12]
 gi|226730591|sp|B0U5A7|RL3_XYLFM RecName: Full=50S ribosomal protein L3
 gi|167964493|gb|ACA11503.1| 50S ribosomal protein L3 [Xylella fastidiosa M12]
          Length = 215

 Score =  244 bits (623), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 99/211 (46%), Positives = 130/211 (61%), Gaps = 2/211 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
             G V RK GM+ V+  +GR IPVT++     +VV  +T D +GY A+QV  G  +   V
Sbjct: 5   SMGFVGRKAGMSRVFLEDGRSIPVTLIEATANRVVQIKTSDVDGYDAIQVTVGSRRSVLV 64

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +KP  G F+   V   + L+EFRV+K       VGS    S F VGQ VD+ G+T GKGF
Sbjct: 65  NKPESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGF 124

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRHNF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  R +V+NLEV+
Sbjct: 125 QGTIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEVI 184

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +D +R LI V+G +PGA     +L+R + K
Sbjct: 185 KIDVERFLIAVRGAIPGASGGD-VLIRSASK 214


>gi|15674081|ref|NP_268256.1| 50S ribosomal protein L3 [Lactococcus lactis subsp. lactis Il1403]
 gi|281492759|ref|YP_003354739.1| 50S ribosomal protein L3P [Lactococcus lactis subsp. lactis KF147]
 gi|42559688|sp|Q9CDW2|RL3_LACLA RecName: Full=50S ribosomal protein L3
 gi|12725153|gb|AAK06197.1|AE006438_11 50S ribosomal protein L3 [Lactococcus lactis subsp. lactis Il1403]
 gi|281376411|gb|ADA65897.1| LSU ribosomal protein L3P [Lactococcus lactis subsp. lactis KF147]
 gi|326407632|gb|ADZ64703.1| 50S ribosomal protein L3 [Lactococcus lactis subsp. lactis CV56]
          Length = 207

 Score =  244 bits (623), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 84/212 (39%), Positives = 121/212 (57%), Gaps = 6/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  ++++ +GY A QVG    +   
Sbjct: 1   MSKGILGKKVGMTQIFTENGELIPVTVIEATPNTVLQVKSVETDGYEATQVGFDTLREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K  +   VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  TNKPAKGHAAKANTTPKRFVREF---KGLEGAEVGAEITVDTFAAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G      +V K KK+AGRMG  RVTV+NL + 
Sbjct: 118 QGPIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-ANKVPKGKKLAGRMGNKRVTVQNLVIA 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ +ILVKG VPGAKK S I+V+ + K+
Sbjct: 176 QVLPEKNVILVKGNVPGAKK-SLIVVKSAIKA 206


>gi|254495711|ref|ZP_05108627.1| 50S ribosomal protein L3 [Legionella drancourtii LLAP12]
 gi|254355058|gb|EET13677.1| 50S ribosomal protein L3 [Legionella drancourtii LLAP12]
          Length = 216

 Score =  244 bits (623), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 90/217 (41%), Positives = 125/217 (57%), Gaps = 1/217 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  EG  +PV+V+ +   +V   +T++ +GY A+Q+  G  K   
Sbjct: 1   MMIGLLGRKIGMTRVFTAEGVSVPVSVVEVHPNRVSQIKTMEADGYAAIQLTGGTKKASK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F+   +       EF V  +D       +     F  GQ VDV+G T GKGF
Sbjct: 61  VNKAQAGHFAKAEIEAGDMQVEFWVDSEDAFKAGQELSVADVFAAGQFVDVSGTTKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNF    ATHG S SHR  GS G  Q PGRVFK KKMAG MG  R TV++LE+V
Sbjct: 121 AGTVKRHNFRTQDATHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNVRCTVQSLELV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
            VD +R L+L+KG +PGA   S + ++ + K     +
Sbjct: 181 RVDAERNLLLIKGAIPGAP-GSRVEIKPAAKKQARGE 216


>gi|309389933|gb|ADO77813.1| LSU ribosomal protein L3P [Halanaerobium praevalens DSM 2228]
          Length = 206

 Score =  244 bits (623), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 89/200 (44%), Positives = 120/200 (60%), Gaps = 4/200 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ +KLGMT  +   G  +PVTV+    C V   +T +K+GY +VQ+G GE K   
Sbjct: 1   MAKAILGKKLGMTQYFKDNGELVPVTVVEAGPCVVTQIKTTEKDGYNSVQLGFGEVKKHR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP  G F S N+ PKK L EF+    D  L  GS      F VG+ +DV+G++ GKGF
Sbjct: 61  LNKPELGQFESRNLEPKKHLREFK--GLDMELSEGSEIKADIFEVGEKIDVSGISKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR N      THG    HR+ GS G   D  RV+K  KM GRMG +RVT +NLE+V
Sbjct: 119 AGNIKRWNHHRGPMTHGSH-FHRAPGSIGAV-DARRVYKGFKMPGRMGHDRVTERNLEIV 176

Query: 181 SVDDKRGLILVKGCVPGAKK 200
            VD +R ++L+ G VPGAKK
Sbjct: 177 KVDLERNVLLIAGPVPGAKK 196


>gi|284040621|ref|YP_003390551.1| 50S ribosomal protein L3 [Spirosoma linguale DSM 74]
 gi|283819914|gb|ADB41752.1| 50S ribosomal protein L3 [Spirosoma linguale DSM 74]
          Length = 220

 Score =  244 bits (623), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 88/206 (42%), Positives = 126/206 (61%), Gaps = 5/206 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT VYN +G+ +  TV+    C V   R+++K+GY AVQ+G G+ K K+ +
Sbjct: 16  SGLIGKKIGMTSVYNADGQALACTVIETGPCVVTQVRSVEKDGYTAVQLGYGDKKEKHSN 75

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121
           KP  G F     +PK+KL EF+  + +  L +G+  +    F     VDV G   G+GF 
Sbjct: 76  KPEMGHFKKAGTTPKRKLVEFK--EFEQELALGTTLTVADVFAETDFVDVVGTAKGRGFQ 133

Query: 122 GAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           G +KRH FGG    THG     R  GS G    P RVFK  +MAGRMGGNRV V+NL V+
Sbjct: 134 GVVKRHGFGGVGGQTHGQHNRGRHPGSIGACSFPSRVFKGLRMAGRMGGNRVKVQNLRVL 193

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
            V  ++ L++V G +PGA KNS++++
Sbjct: 194 RVLPEQNLLVVSGSIPGA-KNSYVII 218


>gi|188575490|ref|YP_001912419.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188519942|gb|ACD57887.1| ribosomal protein L3 [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 207

 Score =  244 bits (623), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 90/208 (43%), Positives = 126/208 (60%), Gaps = 2/208 (0%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           + RK GM+ ++  +GR +PVT++     ++   +T++ +GY AVQ+  G  +   V+KP 
Sbjct: 1   MGRKAGMSRIFTEDGRSVPVTLIEATPNRIAQIKTVEVDGYSAVQITVGARRAALVNKPA 60

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
            G F+   V   + L+EFRV+        VG       F VGQ VDV G+T GKGF G +
Sbjct: 61  AGHFAKAKVEAGRGLWEFRVEDAHLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQGTI 120

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR+NF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  + + +NLEVV VD 
Sbjct: 121 KRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVKVDV 180

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +RGLI + G VPGA     ++VR + K+
Sbjct: 181 ERGLIAIHGAVPGAAGGD-VIVRPASKA 207


>gi|296111429|ref|YP_003621811.1| ribosomal protein L3 [Leuconostoc kimchii IMSNU 11154]
 gi|295832961|gb|ADG40842.1| ribosomal protein L3 [Leuconostoc kimchii IMSNU 11154]
          Length = 227

 Score =  244 bits (623), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 77/222 (34%), Positives = 121/222 (54%), Gaps = 7/222 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  I VTV+      V+  +  + +GY A+Q+G  + +   
Sbjct: 1   MTKGILGRKVGMTQVFTETGELIAVTVVEATPNVVLQVKNAETDGYSALQLGYQDKRAVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  S  N +PK+ + E  ++  +     G       F  G+ VDVTG+T G GF
Sbjct: 61  SNKPEQGHASKANTTPKRYIRE--IRNAEGEFNAGDEIKVDTFESGEYVDVTGITKGHGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +K+        +HG S  HR  GS G      RVFK K + GRMG N+ T++N+ +V
Sbjct: 119 QGNIKKDGQSRGPMSHG-SRYHRRPGSMGAV--INRVFKGKLLPGRMGNNKRTMQNVAIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK-SAVNCKGKVS 221
            VD +  L+L+KG VPGA K S + ++ + K +A + + K++
Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTIKSTVKTNAKHPEVKMA 216


>gi|319938507|ref|ZP_08012901.1| 50S ribosomal protein L3 [Coprobacillus sp. 29_1]
 gi|319806423|gb|EFW03090.1| 50S ribosomal protein L3 [Coprobacillus sp. 29_1]
          Length = 244

 Score =  244 bits (623), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 80/219 (36%), Positives = 122/219 (55%), Gaps = 8/219 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT V+  +G+ IPVTV+   +  V+  +T+  +GY A+QVG  + + K  +
Sbjct: 2   KGILGRKIGMTQVFTTDGKLIPVTVVEATSNVVLQKKTVATDGYDAIQVGFEDKREKLAT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K  +G  +    +PK+ + EFR  +      VG       F  G++VDVTG + GKG+ G
Sbjct: 62  KAHKGHVAKAETAPKRFIKEFRYDEMMS-YEVGQEIKVDSFVAGEVVDVTGTSKGKGYQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRH        HG S +HR  GS G    P R+   KK+ G+MG    TV+NLE+V+V
Sbjct: 121 VIKRHGQSIGPKGHG-SGAHRIVGSMGPIA-PNRIAPGKKLPGQMGNVTRTVQNLEIVAV 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
           D +  ++L+ G +PG KK   +      K+AV   GKV+
Sbjct: 179 DVENNVLLISGSIPGPKKGLVV-----VKTAVKANGKVN 212


>gi|114330574|ref|YP_746796.1| ribosomal protein L3 [Nitrosomonas eutropha C91]
 gi|122314432|sp|Q0AIJ5|RL3_NITEC RecName: Full=50S ribosomal protein L3
 gi|114307588|gb|ABI58831.1| LSU ribosomal protein L3P [Nitrosomonas eutropha C91]
          Length = 217

 Score =  244 bits (623), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 93/215 (43%), Positives = 135/215 (62%), Gaps = 3/215 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +K+GMT ++   G  +PVTVL +   +VV  +T +++GY A+Q+  G  +   
Sbjct: 1   MKLGLIGKKVGMTRIFTESGSSVPVTVLDVSKNRVVQIKTAERDGYSAIQLTQGYRRKNR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           ++K + G F+   V   K + EFR+++      L +GS  +   F  G  VDV+G++IGK
Sbjct: 61  ITKALSGHFARAGVEAGKVIKEFRIEQQAINSDLKLGSEINVEIFLTGSKVDVSGVSIGK 120

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           G++G +KRHNF   RA+HG S SH   GS G  QDPGRVF  KKM GR+GG   T++N+E
Sbjct: 121 GYAGTIKRHNFSSSRASHGNSRSHNVPGSIGMAQDPGRVFPGKKMTGRLGGVNSTIQNIE 180

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           VV VD  RGLI +KG VPG+K N  + +R S K A
Sbjct: 181 VVRVDTVRGLIFLKGSVPGSKGNG-VFIRPSVKHA 214


>gi|326692237|ref|ZP_08229242.1| 50S ribosomal protein L3 [Leuconostoc argentinum KCTC 3773]
          Length = 228

 Score =  243 bits (622), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 79/219 (36%), Positives = 118/219 (53%), Gaps = 8/219 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  I VTV+      V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGRKVGMTQVFTETGELIAVTVVEATPNVVLQVKTVETDGYDAVQLGYQDKRAVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  S  N +PK+ + E  ++  +     G       F  G+ VDVTG+T G GF
Sbjct: 61  SNKPEQGHASKANTTPKRYVRE--IRNAEGEFNAGDEIKVDTFAAGEYVDVTGITKGHGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +K+         HG S  HR  GS G      RVFK K + GRMG ++ T++N+ +V
Sbjct: 119 QGNIKKDGQSRGPMAHG-SRYHRRPGSMGAI--INRVFKGKLLPGRMGNHKRTMQNVAIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            VD +  L+L+KG VPGA K S + ++ + K  VN K  
Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTIKSTVK--VNAKHP 211


>gi|163786190|ref|ZP_02180638.1| 50S ribosomal protein L3 [Flavobacteriales bacterium ALC-1]
 gi|159878050|gb|EDP72106.1| 50S ribosomal protein L3 [Flavobacteriales bacterium ALC-1]
          Length = 205

 Score =  243 bits (622), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 85/205 (41%), Positives = 121/205 (59%), Gaps = 4/205 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C V   RT + +GY A+Q+G  +A  K+ +
Sbjct: 2   SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCIVTQVRTEEVDGYSALQLGFDDATEKSAT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G       S K+K+ EF+     +   +G   +   FT G+ VDV G + GKGF G
Sbjct: 62  KADLGHAKKAGTSVKRKVVEFKGFG--EEYKLGDAITVEQFTEGEFVDVAGTSKGKGFQG 119

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH F G  +ATHG     R+ GS G    P RVFK  KMAGRMGG  V V+NL V  
Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGRMGGETVKVQNLRVYK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           V  ++ L++VKGCVPG  KNS++++
Sbjct: 180 VVPEKNLLVVKGCVPG-HKNSYVII 203


>gi|283767342|ref|ZP_06340257.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus H19]
 gi|283461221|gb|EFC08305.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus H19]
          Length = 220

 Score =  243 bits (622), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 94/221 (42%), Positives = 123/221 (55%), Gaps = 11/221 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY A+QVG        
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEAKENLVLQKKTVEVDGYNAIQVGFEDKKAYK 60

Query: 54  -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
                 K  +KP  G     + +PK+ + EFR   D D   VG   S   F  G ++DVT
Sbjct: 61  KDAKSNKYANKPAEGHAKKADAAPKRFIREFR-NVDVDAYEVGQEVSVDTFVAGDVIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH       +HG    HR+ GS G   D  RVFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQSRGPMSHGSH-FHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           TV+NLEVV VD +  +ILVKG VPG KK   + +R S K  
Sbjct: 179 TVQNLEVVQVDTENKVILVKGNVPGPKKG-LVEIRTSIKKG 218


>gi|317496190|ref|ZP_07954550.1| 50S ribosomal protein L3 [Gemella moribillum M424]
 gi|329770040|ref|ZP_08261435.1| 50S ribosomal protein L3 [Gemella sanguinis M325]
 gi|316913765|gb|EFV35251.1| 50S ribosomal protein L3 [Gemella moribillum M424]
 gi|328837351|gb|EGF86981.1| 50S ribosomal protein L3 [Gemella sanguinis M325]
          Length = 220

 Score =  243 bits (622), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 90/223 (40%), Positives = 124/223 (55%), Gaps = 14/223 (6%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++   G  IPVTV+      V+  +T +  GY A+Q+G  + +  +
Sbjct: 1   MTKGILGRKVGMTQIFAENGELIPVTVVEAKGNVVLQKKTEEVEGYNAIQLGFDDKRPYD 60

Query: 61  V----------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
                      +KP +G     N +PK+ + E R   D     VG       F  G LVD
Sbjct: 61  KERKDRLVKVANKPEQGHADKANTAPKRFVREIR-DADVASYEVGQEVQVDIFAAGDLVD 119

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           VTG++ GKGF GA+KRH        HG S  HR  GS G    P RVFK K + G+MGG 
Sbjct: 120 VTGVSKGKGFQGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKALPGQMGGV 177

Query: 171 RVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            VT +NLE+VSVD + GLILVKGC+PG+KK S++ ++ + KS 
Sbjct: 178 TVTTQNLEIVSVDVENGLILVKGCIPGSKK-SFVKIQSAVKSG 219


>gi|15837754|ref|NP_298442.1| 50S ribosomal protein L3 [Xylella fastidiosa 9a5c]
 gi|9106116|gb|AAF83962.1|AE003950_12 50S ribosomal protein L3 [Xylella fastidiosa 9a5c]
          Length = 210

 Score =  243 bits (622), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 100/210 (47%), Positives = 129/210 (61%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G V RK GM+ V+  +G  IPVT++     +VV  +T D +GY AVQV  G  +   V+
Sbjct: 1   MGFVGRKAGMSRVFLEDGCSIPVTLIEATANRVVQIKTSDVDGYDAVQVTVGSRRSVLVN 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           KP  G F+   V   + L+EFRV+K       VGS    S F VGQ VD+ G+T GKGF 
Sbjct: 61  KPESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGFQ 120

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  R +V+NLEVV 
Sbjct: 121 GTIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEVVK 180

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +D +R LI V+G +PGA     +L+R + K
Sbjct: 181 IDVERCLIAVRGAIPGASGGD-VLIRSASK 209


>gi|21672770|ref|NP_660837.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|25009109|sp|Q8K950|RL3_BUCAP RecName: Full=50S ribosomal protein L3
 gi|21623417|gb|AAM68048.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 209

 Score =  243 bits (622), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 91/209 (43%), Positives = 128/209 (61%), Gaps = 2/209 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +KLGM+ ++  EG  IP+TV+ +   ++   R +  + Y A+QV  G  K+  + 
Sbjct: 2   IGLVGKKLGMSRIFTKEGSSIPITVIQIQENRITQIRNIKTDKYYAIQVTTGLKKLNRLK 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V P + L+EFR+  +++   +G     + F   + VDVTG++ GKGFSG
Sbjct: 62  KPESGHFLKSGVIPGRGLWEFRI-NNNEKFQIGQSIKINIFNDIKKVDVTGISKGKGFSG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PGRVFK KKMAG +G NRVTV+NL +V +
Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGHLGNNRVTVQNLNIVKI 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D  R L+LVKG VPG    S ++V+ + K
Sbjct: 181 DQNRNLLLVKGAVPGP-TGSDLIVKPAIK 208


>gi|302344356|ref|YP_003808885.1| 50S ribosomal protein L3 [Desulfarculus baarsii DSM 2075]
 gi|301640969|gb|ADK86291.1| 50S ribosomal protein L3 [Desulfarculus baarsii DSM 2075]
          Length = 207

 Score =  243 bits (622), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 88/209 (42%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++  EGR + VTVL +  C VV  +T D + Y A+Q+G G  K KN
Sbjct: 1   MLKGLIGKKVGMTRLFLEEGRAVAVTVLEVGPCHVVQIKTEDNDQYNALQLGFGAKKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP  G F    V     L EFRV+   D   VG   +   F +G  V+VTG + G+GF
Sbjct: 61  VNKPTAGHFKKAGVEATSTLREFRVEDVAD-FEVGQTITADMFKMGDSVNVTGRSKGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG +KRHNFGG R THG + +H + GS G   DP RVFK  ++ G  G  R  V+NL++V
Sbjct: 120 SGVVKRHNFGGGRDTHGCT-THDAPGSIGQSADPSRVFKGVRLPGHYGAERKQVRNLKIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            V  ++ L++V+G VPG      +LV  +
Sbjct: 179 DVRPEQNLVVVRGAVPGPN-GGIVLVEKA 206


>gi|302692256|ref|XP_003035807.1| hypothetical protein SCHCODRAFT_74210 [Schizophyllum commune H4-8]
 gi|300109503|gb|EFJ00905.1| hypothetical protein SCHCODRAFT_74210 [Schizophyllum commune H4-8]
          Length = 323

 Score =  243 bits (622), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 105/221 (47%), Positives = 139/221 (62%), Gaps = 5/221 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVV-HRTLDKNG--YMAVQVGAGEAK 57
           +R+GV+ARK GMT ++N  G   PVTVL L+NCQV    RT+ ++   Y AVQV A +  
Sbjct: 56  VRTGVIARKKGMTTIFNEHGVACPVTVLQLENCQVTANIRTVRRDHTVYHAVQVAASDKA 115

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
            KN S  M G F+   V PK+ + EF V  D  ++PVG+  S  +F  GQ VDV   +IG
Sbjct: 116 AKNTSIQMLGHFNKAGVPPKQVVKEFPVTPD-AVVPVGTTLSACHFVPGQYVDVVANSIG 174

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF G MKR  FGGL A+HG SISHRS GSTG   DP RV+  +KMAGR+G  R T +NL
Sbjct: 175 KGFQGGMKRWGFGGLAASHGASISHRSLGSTGQNTDPARVWPGRKMAGRLGNERTTTQNL 234

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
            V  +D++  ++ V+G VPG   ++++ VRD+ K A   K 
Sbjct: 235 LVERIDNELNIVYVRGAVPGVD-DAFVQVRDAKKKAAVGKH 274


>gi|295660136|ref|XP_002790625.1| 54S ribosomal protein L9 [Paracoccidioides brasiliensis Pb01]
 gi|226281500|gb|EEH37066.1| 54S ribosomal protein L9 [Paracoccidioides brasiliensis Pb01]
          Length = 297

 Score =  243 bits (622), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 97/215 (45%), Positives = 139/215 (64%), Gaps = 3/215 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+GV+A K GMT +++   G+R P T+L LD  QV+ H+TL K+GY AVQVG G    +
Sbjct: 74  LRTGVLAVKKGMTAIFDQETGKRTPCTILQLDQVQVISHKTLKKHGYFAVQVGCGWKHER 133

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            V++PM G F++  V+PK+ + EFRV+ +  LLP+G V +  +F  GQ VD    + G G
Sbjct: 134 AVTRPMLGHFAANGVAPKRHIHEFRVKDESGLLPIGEVINADWFQEGQFVDARSNSRGMG 193

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F G MKRH F G   +HGVS++HRS GS G  Q  G RV   KKMAG MG  +VT++NL+
Sbjct: 194 FEGVMKRHGFHGQDRSHGVSLAHRSLGSAGPSQGGGSRVHPGKKMAGNMGNEQVTLQNLK 253

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V+ VD ++G+++V G V G  K   + ++D+ K  
Sbjct: 254 VLKVDAEKGIVVVNGSVSGP-KGCIVKLQDALKKP 287


>gi|148544696|ref|YP_001272066.1| 50S ribosomal protein L3 [Lactobacillus reuteri DSM 20016]
 gi|184154049|ref|YP_001842390.1| 50S ribosomal protein L3 [Lactobacillus reuteri JCM 1112]
 gi|194466953|ref|ZP_03072940.1| ribosomal protein L3 [Lactobacillus reuteri 100-23]
 gi|227363819|ref|ZP_03847926.1| ribosomal protein L3 [Lactobacillus reuteri MM2-3]
 gi|227543623|ref|ZP_03973672.1| ribosomal protein L3 [Lactobacillus reuteri CF48-3A]
 gi|300909348|ref|ZP_07126809.1| 50S ribosomal protein L3 [Lactobacillus reuteri SD2112]
 gi|325683030|ref|ZP_08162546.1| 50S ribosomal protein L3 [Lactobacillus reuteri MM4-1A]
 gi|212288404|sp|A5VLK5|RL3_LACRD RecName: Full=50S ribosomal protein L3
 gi|226730527|sp|B2G8X8|RL3_LACRJ RecName: Full=50S ribosomal protein L3
 gi|148531730|gb|ABQ83729.1| LSU ribosomal protein L3P [Lactobacillus reuteri DSM 20016]
 gi|183225393|dbj|BAG25910.1| 50S ribosomal protein L3 [Lactobacillus reuteri JCM 1112]
 gi|194453989|gb|EDX42886.1| ribosomal protein L3 [Lactobacillus reuteri 100-23]
 gi|227071176|gb|EEI09492.1| ribosomal protein L3 [Lactobacillus reuteri MM2-3]
 gi|227186463|gb|EEI66534.1| ribosomal protein L3 [Lactobacillus reuteri CF48-3A]
 gi|300893213|gb|EFK86572.1| 50S ribosomal protein L3 [Lactobacillus reuteri SD2112]
 gi|324977380|gb|EGC14331.1| 50S ribosomal protein L3 [Lactobacillus reuteri MM4-1A]
          Length = 219

 Score =  243 bits (622), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 78/212 (36%), Positives = 120/212 (56%), Gaps = 5/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+   G  +PVTV+ +    V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQIKTVENDGYSAVQLGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + E R   +   + VG       F  G+ VDVTG T G G+
Sbjct: 61  SNKPEQGHAAKANTTPKRFIGEIR-DAELGDIKVGDEVKADVFAEGETVDVTGTTKGHGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G + + N       HG S  HR  GS G      RVFK  K+ GRMGG  VT+++L+VV
Sbjct: 120 QGNIHKDNQSRGPMAHG-SRYHRRPGSLGAI--INRVFKGMKLPGRMGGKTVTMQHLQVV 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD    ++L+KG VPGA K S++ +++S K+
Sbjct: 177 KVDLDNNVLLIKGNVPGANK-SYVTIKNSVKA 207


>gi|194335445|ref|YP_002017239.1| ribosomal protein L3 [Pelodictyon phaeoclathratiforme BU-1]
 gi|226730543|sp|B4SBU7|RL3_PELPB RecName: Full=50S ribosomal protein L3
 gi|194307922|gb|ACF42622.1| ribosomal protein L3 [Pelodictyon phaeoclathratiforme BU-1]
          Length = 209

 Score =  243 bits (622), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 87/207 (42%), Positives = 127/207 (61%), Gaps = 1/207 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT ++N +   +  T++    C V   +  DK GY A Q+G GE K K VSKP
Sbjct: 4   ILGKKIGMTRLFNEKREAVSCTIIQAGPCFVTQVKRADKEGYDAYQIGIGERKEKKVSKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           ++G +    V+P  KL EF  ++ +  L +GS  S   FT G+ V+V G++ GKGF+G M
Sbjct: 64  LQGHYKKAGVAPGFKLAEFDFKELNQELELGSAVSVESFTEGEKVNVLGVSKGKGFAGVM 123

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHNF G + THG S   R+ GS G   DP RVFK  +MAGRMG + +TV+NL +  +  
Sbjct: 124 KRHNFSGGQRTHGQSDRQRAPGSVGGSSDPSRVFKGTRMAGRMGSDNITVRNLVIFKIMP 183

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
           +  LI++KG VPG  KNS++ +  + K
Sbjct: 184 ESNLIVIKGSVPGP-KNSYVKIVSTKK 209


>gi|226198141|ref|ZP_03793712.1| 50S ribosomal protein L3 [Burkholderia pseudomallei Pakistan 9]
 gi|225929661|gb|EEH25677.1| 50S ribosomal protein L3 [Burkholderia pseudomallei Pakistan 9]
          Length = 208

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 93/201 (46%), Positives = 124/201 (61%), Gaps = 2/201 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT ++  EG  IPVTVL + + +V   +T++ +GY AVQV  G  +   V+KP+ G  + 
Sbjct: 1   MTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASRVTKPLAGHLAK 60

Query: 72  VNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
             V   + L EFR++ D    L  G+V  P  F VGQ VDV G++IGKG++G +KR+NFG
Sbjct: 61  AGVEAGEILKEFRIEADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKGYAGTIKRYNFG 120

Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
             RA+HG S SH   GS G  QDPGRVF  K+M G MG   VTV+NLE+  +D  R L+L
Sbjct: 121 SGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEIARIDADRKLLL 180

Query: 191 VKGCVPGAKKNSWILVRDSFK 211
           VKG VPGA K   + V  + K
Sbjct: 181 VKGAVPGA-KGGKVFVTPAVK 200


>gi|148238770|ref|YP_001224157.1| 50S ribosomal protein L3 [Synechococcus sp. WH 7803]
 gi|166234602|sp|A5GIU5|RL3_SYNPW RecName: Full=50S ribosomal protein L3
 gi|147847309|emb|CAK22860.1| 50S ribosomal protein L3 [Synechococcus sp. WH 7803]
          Length = 218

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 85/219 (38%), Positives = 131/219 (59%), Gaps = 4/219 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +G+ +PVT++    C++   +T + +GY AVQ+G GE + K 
Sbjct: 1   MSIGILGKKLGMSQLFDEQGKAVPVTLIEAGPCRITQLKTTETDGYSAVQIGFGETRDKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G  +       + L E+RV  D + L +G   + S F  GQ VDV+G T+G+GF
Sbjct: 61  VNKPAKGHLAKSGEGVLRHLSEYRVD-DVNGLELGGAVTVSDFEAGQKVDVSGDTMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     THG S +HR  GSTG    PGR++  K+MAGR GG + T + L ++
Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKTTTRGLTIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK-SAVNCKG 218
            VD  R L++VKG VPG    + + +R + +  A   KG
Sbjct: 179 KVDSDRNLLVVKGSVPGKP-GALLNIRPANRVGAKPAKG 216


>gi|113953361|ref|YP_729667.1| 50S ribosomal protein L3 [Synechococcus sp. CC9311]
 gi|123031873|sp|Q0ID05|RL3_SYNS3 RecName: Full=50S ribosomal protein L3
 gi|113880712|gb|ABI45670.1| ribosomal protein L3 [Synechococcus sp. CC9311]
          Length = 218

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 80/219 (36%), Positives = 130/219 (59%), Gaps = 4/219 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++ +G+ +PVT++    C++   ++ + +GY AVQ+G GE + K 
Sbjct: 1   MSIGILGKKLGMSQFFDEQGKAVPVTLIEAGPCRITQLKSSETDGYQAVQIGFGEIREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G  +       + L E+RV  D D + +G   +   F  GQ VDV+G T+G+GF
Sbjct: 61  INKPAKGHLAKSGEDLVRHLCEYRVD-DLDGIQLGGAVTVGDFAAGQKVDVSGDTMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     THG S +HR  GS G    PGR++  K+M+GR GG ++T + L ++
Sbjct: 120 AGLQKRHGFSRGPMTHG-SKNHRQPGSIGAGTTPGRIYPGKRMSGRYGGKKITTRGLTIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK-SAVNCKG 218
            +D +R L++VKG VPG    S + +R + +  A   KG
Sbjct: 179 KIDSERNLLVVKGSVPGKP-GSLLNIRPANRVGAKPAKG 216


>gi|153872677|ref|ZP_02001498.1| Ribosomal protein L3 [Beggiatoa sp. PS]
 gi|152070858|gb|EDN68503.1| Ribosomal protein L3 [Beggiatoa sp. PS]
          Length = 213

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 91/214 (42%), Positives = 130/214 (60%), Gaps = 3/214 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G+V  K GMT +++   G  IPVTV+     ++   +T   +GY A+QV +     K
Sbjct: 1   MALGIVGIKCGMTRLFDTAAGDVIPVTVIKAPPNRITQIKTQIHDGYQAIQVTSPLKVPK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           +++KP++G  +  +VS     +EFR+  D    L +G     + F  GQ VDVTG+T GK
Sbjct: 61  HINKPIKGHLAKASVSTGFGFWEFRLANDTLKELKLGGEIDVTLFVTGQNVDVTGVTKGK 120

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF+G +KRH+F    ATHG S+SHR+ GS G  Q PGRVFK KKMAG +G  R TV+NL 
Sbjct: 121 GFAGVVKRHHFRTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHLGCQRRTVQNLT 180

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           ++ V  ++ L+L+KG VPGA  N  ++VR + K 
Sbjct: 181 IMRVIAEKNLLLIKGAVPGAP-NGTVIVRPAIKG 213


>gi|116334269|ref|YP_795796.1| 50S ribosomal protein L3 [Lactobacillus brevis ATCC 367]
 gi|122269049|sp|Q03PV7|RL3_LACBA RecName: Full=50S ribosomal protein L3
 gi|116099616|gb|ABJ64765.1| LSU ribosomal protein L3P [Lactobacillus brevis ATCC 367]
          Length = 216

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 71/212 (33%), Positives = 111/212 (52%), Gaps = 5/212 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
             G++ +K+GMT V+   G  IPVTV+      V+  +T++ +GY A+Q+G  + +    
Sbjct: 3   TKGILGKKVGMTQVFTDAGELIPVTVVEATPNVVLQVKTMENDGYNAIQLGYQDKREVLS 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP +G  +  N +PK+ + EF    +     V        F  G +VDVTG+T G G+ 
Sbjct: 63  NKPEQGHVAKANTTPKRFIREF-TDVELGDYKVADEVKVDTFQAGDIVDVTGVTKGHGYQ 121

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G + +         HG S  HR  GS G      RVF   K+ GRMG  +VT++NL +V 
Sbjct: 122 GNIHKDGQSRGPMAHG-SRYHRRPGSLGAI--INRVFPGMKLPGRMGNKQVTIQNLVIVK 178

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D +  ++L+KG VPGA K S + V+ + +  
Sbjct: 179 ADVENNVLLIKGNVPGANK-SLVTVKSAVRPP 209


>gi|86739295|ref|YP_479695.1| 50S ribosomal protein L3 [Frankia sp. CcI3]
 gi|109893429|sp|Q2JFH6|RL3_FRASC RecName: Full=50S ribosomal protein L3
 gi|86566157|gb|ABD09966.1| LSU ribosomal protein L3P [Frankia sp. CcI3]
          Length = 235

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 93/209 (44%), Positives = 124/209 (59%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      V   +T D +GY AVQ+G GE   + ++K
Sbjct: 8   GLLGTKLGMTQVWDANNRVVPVTVIKAGPNVVTQVKTPDSDGYSAVQLGYGEVDPRKINK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P RG F++  V+P++ L E R     +  P G   +   F+ G +VDVTG + GKGF+G 
Sbjct: 68  PARGHFATSGVTPRRHLVELRTADAGNYRP-GQELTGEVFSAGTVVDVTGTSKGKGFAGV 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GL A HGV   HRS GS G    PGRVFK  +MAGRMG  R T   L + +VD
Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGHVRTTTSGLTIHAVD 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +RG +LV+G VPG      +LVR + K 
Sbjct: 187 TERGYLLVRGAVPGPD-GGLVLVRSAAKR 214


>gi|125625143|ref|YP_001033626.1| 50S ribosomal protein L3 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|166233151|sp|A2RNQ5|RL3_LACLM RecName: Full=50S ribosomal protein L3
 gi|124493951|emb|CAL98946.1| 50S ribosomal protein L3 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071951|gb|ADJ61351.1| 50S ribosomal protein L3 [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 207

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 84/212 (39%), Positives = 121/212 (57%), Gaps = 6/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  ++++ +GY A QVG    +   
Sbjct: 1   MSKGILGKKVGMTQIFTDNGELIPVTVIEATPNTVLQVKSVETDGYEATQVGFDTLREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EF   K  +   VG+  +   F  G +VDVTG + GKGF
Sbjct: 61  TNKPAKGHAAKANTTPKRFVREF---KGLEGAEVGAEITVDTFAAGDVVDVTGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH        HG S  HR  GS G      +V K KK+AGRMG  RVTV+NL + 
Sbjct: 118 QGPIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-ANKVPKGKKLAGRMGNKRVTVQNLVIA 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  ++ +ILVKG VPGAKK S I+V+ + K+
Sbjct: 176 QVLPEKNVILVKGNVPGAKK-SLIVVKSAIKA 206


>gi|284049257|ref|YP_003399596.1| 50S ribosomal protein L3 [Acidaminococcus fermentans DSM 20731]
 gi|283953478|gb|ADB48281.1| 50S ribosomal protein L3 [Acidaminococcus fermentans DSM 20731]
          Length = 219

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 94/216 (43%), Positives = 130/216 (60%), Gaps = 5/216 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT ++  +G  +PVTV+    C V+ ++T +K+GY AVQ+G G+ K K 
Sbjct: 1   MAKGILGKKLGMTQIFEADGTLVPVTVVEAGPCVVLQNKTEEKDGYNAVQLGFGDIKEKQ 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+GFF    V+P K + E R+    +   VG   +   F  G LVD  G++ GKGF
Sbjct: 61  VNKPMKGFFDKAGVAPVKVVREVRLDAPSE-YKVGDKIAADIFAAGDLVDAVGVSRGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KRHNF      HG S SHR  GS G       GRV K KK+ GRMGG   TV+ L 
Sbjct: 120 AGTIKRHNFARGPMKHG-SKSHREPGSNGPMHSGPGGRVIKGKKLPGRMGGISATVQRLT 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           +  VD  R LI+VKG VPGA   +++L+RD+ +  V
Sbjct: 179 IAKVDKDRNLIMVKGSVPGAA-GTFLLLRDTVRPDV 213


>gi|3984|emb|CAA46148.1| YmL9 mitochondrial ribosomal protein [Saccharomyces cerevisiae]
          Length = 269

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 97/212 (45%), Positives = 139/212 (65%), Gaps = 2/212 (0%)

Query: 2   RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           R G++ RK GM   ++   G R   T+L ++N +V++HRT + NGY A QVG G   +  
Sbjct: 58  RCGLITRKKGMMPYFDKSTGERSAATILEVNNVEVIMHRTSEVNGYFACQVGYGSRHLSK 117

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS+ M G F+S  V+PK+ + +FRV+ +  L+P G++  PS+F  GQ VDV  ++ GKGF
Sbjct: 118 VSRQMLGHFASKVVNPKEHVAQFRVKDEKGLIPPGTLLKPSFFKEGQYVDVRSVSKGKGF 177

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR+ F GLRA+HG SI HR  GS G  QDPGRV   +KM G MG   VT++N++V+
Sbjct: 178 TGVMKRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVL 237

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VDD+  +I VKG V G  KNS++ ++D+ K 
Sbjct: 238 KVDDENNVIWVKGSVAGP-KNSFVKIQDAIKK 268


>gi|169630900|ref|YP_001704549.1| 50S ribosomal protein L3 [Mycobacterium abscessus ATCC 19977]
 gi|169242867|emb|CAM63895.1| 50S ribosomal protein L3 [Mycobacterium abscessus]
          Length = 205

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 84/204 (41%), Positives = 121/204 (59%), Gaps = 3/204 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V++   R +PVTV+      V   RT +++GY AVQ+  GE   + V+KP+ G F++
Sbjct: 1   MTQVFDDNNRVVPVTVVKAGPNVVTRIRTTEQDGYSAVQLAYGEISPRKVTKPVTGQFAA 60

Query: 72  VNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129
             ++P++ L E R+  +       VG   +   F+ G  VDVTG + GKGF+G MKRH F
Sbjct: 61  AGINPRRHLAELRLDDEAAAAEYEVGQELTAEIFSDGAYVDVTGTSKGKGFAGTMKRHGF 120

Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLI 189
            G  A+HG    HR  GS G    PGRVFK  +M+GRMG +RVT +NL V  VD + G++
Sbjct: 121 RGQGASHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGSDRVTTQNLVVHKVDAENGVL 180

Query: 190 LVKGCVPGAKKNSWILVRDSFKSA 213
           L+KG +PG +K   ++VR + K  
Sbjct: 181 LIKGAIPG-RKGGLVVVRTAVKRG 203


>gi|28198353|ref|NP_778667.1| 50S ribosomal protein L3 [Xylella fastidiosa Temecula1]
 gi|42559619|sp|Q87E82|RL3_XYLFT RecName: Full=50S ribosomal protein L3
 gi|212288597|sp|B2I8G9|RL3_XYLF2 RecName: Full=50S ribosomal protein L3
 gi|28056423|gb|AAO28316.1| 50S ribosomal protein L3 [Xylella fastidiosa Temecula1]
          Length = 215

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 98/211 (46%), Positives = 129/211 (61%), Gaps = 2/211 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
             G V RK GM+ V+  +G  IPVT++     +VV  +T D +GY AVQV  G  +   V
Sbjct: 5   SMGFVGRKAGMSRVFLEDGCSIPVTLIEATANRVVQIKTSDVDGYDAVQVTVGSRRSVLV 64

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +KP  G F+   V   + L+EFRV+K       VGS    S F VGQ VD+ G+T GKGF
Sbjct: 65  NKPESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGF 124

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRHNF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  + +V+NLEV+
Sbjct: 125 QGTIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVKQSVQNLEVI 184

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +D +R LI V+G +PGA     +L+R + K
Sbjct: 185 KIDVERCLIAVRGAIPGASGGD-VLIRSASK 214


>gi|189095434|ref|YP_001936447.1| ribosomal protein L3 [Heterosigma akashiwo]
 gi|157694777|gb|ABV66053.1| 50S ribosomal protein L3 [Heterosigma akashiwo]
 gi|157778008|gb|ABV70194.1| 50S ribosomal protein L3 [Heterosigma akashiwo]
          Length = 208

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 82/210 (39%), Positives = 121/210 (57%), Gaps = 3/210 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT +++  G  +PVTV+    C V   +    +GY A+Q+G    K+KN
Sbjct: 1   MSIGILGTKIGMTQIFDENGLAVPVTVVQSGPCIVTQIKNFSTDGYNAIQIGFLAKKIKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +K  +G F+ V   P++ L EF+V+  ++   +G       F +GQ V+VTG +IGKGF
Sbjct: 61  TNKAEQGHFTKVGCQPQRILKEFKVESTEN-FTLGQQIKVDCFEIGQFVNVTGRSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KR+NF     THG S +HR  GS G    PGRV   KKMAG+ G   VT+  L+V+
Sbjct: 120 SGLQKRYNFSRGPMTHG-SKNHRLPGSIGAGTTPGRVLPGKKMAGQYGNKNVTISKLKVL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           ++D K  L+L+KG +PG   N  + +  S 
Sbjct: 179 NIDSKENLLLLKGAIPGKAGN-IVSIAPSL 207


>gi|88807884|ref|ZP_01123395.1| 50S ribosomal protein L3 [Synechococcus sp. WH 7805]
 gi|88787923|gb|EAR19079.1| 50S ribosomal protein L3 [Synechococcus sp. WH 7805]
          Length = 218

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 85/219 (38%), Positives = 130/219 (59%), Gaps = 4/219 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +G+ +PVT++    C++   +T + +GY AVQ+G GE + K 
Sbjct: 1   MSIGILGKKLGMSQLFDEQGKAVPVTLIEAGPCRITQLKTTETDGYSAVQIGFGETRDKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G  +       + L E+RV  D D L +G   +   F  GQ VDV+G T+G+GF
Sbjct: 61  VNKPAKGHLAKSGEGVLRHLSEYRVD-DVDGLELGGAVTVGDFEAGQKVDVSGDTMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     THG S +HR  GSTG    PGR++  K+MAGR GG + T + L ++
Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKTTTRGLTIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK-SAVNCKG 218
            VD  R L++VKG VPG    + + +R + +  A   KG
Sbjct: 179 RVDSDRNLLVVKGSVPGKP-GALLNIRPANRVGAKPAKG 216


>gi|198282637|ref|YP_002218958.1| 50S ribosomal protein L3 [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218666383|ref|YP_002424830.1| ribosomal protein L3 [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|226725119|sp|B7J467|RL3_ACIF2 RecName: Full=50S ribosomal protein L3
 gi|226725120|sp|B5ELX9|RL3_ACIF5 RecName: Full=50S ribosomal protein L3
 gi|198247158|gb|ACH82751.1| ribosomal protein L3 [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218518596|gb|ACK79182.1| ribosomal protein L3 [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 210

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 93/212 (43%), Positives = 132/212 (62%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT +   +GR +PVTV+H+    V   + +  +GY AVQV  G  + + 
Sbjct: 1   MVMGLIGRKVGMTRIVAGDGRVLPVTVIHVAPNTVAQVKDIATDGYCAVQVATGTRRPQR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+  + G F    ++P + L EFRV  D      G       F  GQ VDV+G++ GKGF
Sbjct: 61  VTSALAGHFRKNGIAPGRLLREFRV-ADTANYACGMDIDLDIFAEGQRVDVSGVSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GA+KRHNF   RA+HG S+SHR+ GS GCRQ PGRVFK KKMAG +G  +VT  NLE+V
Sbjct: 120 AGAIKRHNFRSNRASHGNSLSHRAPGSIGCRQTPGRVFKGKKMAGHLGAEQVTTLNLELV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +D  R L+++KG VPGA+    +++R + + 
Sbjct: 180 RIDANRRLLMIKGAVPGARDGD-VMIRPAVRG 210


>gi|159463470|ref|XP_001689965.1| mitochondrial ribosomal protein L3 [Chlamydomonas reinhardtii]
 gi|158283953|gb|EDP09703.1| mitochondrial ribosomal protein L3 [Chlamydomonas reinhardtii]
          Length = 285

 Score =  243 bits (620), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 95/219 (43%), Positives = 135/219 (61%), Gaps = 2/219 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+G +A K GMT  ++  G R+P+TVL +D CQVV  +T   +GY A+ +G+G  + K 
Sbjct: 6   LRTGCIATKAGMTQEWDEHGVRVPLTVLWVDECQVVGLKTRPVHGYNALMLGSGYKRQKC 65

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +S    GFF    V  KK + E++V +D  L+PVG+    +++  GQ VDVTG T  KGF
Sbjct: 66  MSPSEAGFFLKAGVPFKKLVAEWQVSED-ALVPVGTAIGAAHYVAGQRVDVTGWTKWKGF 124

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G M+R  F GL A+HGVS+SHR+ GS G RQDPG+++K KK+ G MG  R TV N  V 
Sbjct: 125 QGVMRRWGFKGLPASHGVSLSHRAPGSIGNRQDPGKIWKGKKLPGCMGDERRTVHNCLVY 184

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            VD  R L+ ++G VPG    S + +RDS  ++   +  
Sbjct: 185 KVDAARNLVYLRGQVPGPVGRS-VFLRDSRLASPALRAS 222


>gi|91216910|ref|ZP_01253874.1| 50S ribosomal protein L3 [Psychroflexus torquis ATCC 700755]
 gi|91185071|gb|EAS71450.1| 50S ribosomal protein L3 [Psychroflexus torquis ATCC 700755]
          Length = 204

 Score =  243 bits (620), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 77/205 (37%), Positives = 119/205 (58%), Gaps = 3/205 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C V   RT + +GY A+Q+G  +   KN +
Sbjct: 2   SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTNEVDGYEALQLGFDDKSDKNAT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F     S K+K+ EF+  K++    +G   +   F   + VDV+  + GKGF G
Sbjct: 62  KADLGHFKKAGSSVKRKVIEFQGFKEE--YKLGDHITVDLFKENEFVDVSATSKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRH F G + THG     R+ GS G    P R+FK  KM G+MG  +V V+NL V+ V
Sbjct: 120 VVKRHGFAGSQRTHGQQSMLRAPGSVGAASYPARIFKGMKMGGQMGSQKVKVQNLRVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             ++ LI++KGCVPG   N+++ ++
Sbjct: 180 VPEKNLIVIKGCVPG-HNNTYVTIQ 203


>gi|193211851|ref|YP_001997804.1| 50S ribosomal protein L3 [Chlorobaculum parvum NCIB 8327]
 gi|226725146|sp|B3QR75|RL3_CHLP8 RecName: Full=50S ribosomal protein L3
 gi|193085328|gb|ACF10604.1| ribosomal protein L3 [Chlorobaculum parvum NCIB 8327]
          Length = 209

 Score =  243 bits (620), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 88/207 (42%), Positives = 122/207 (58%), Gaps = 1/207 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT +YN +   +P TV+    C V   ++ +K+GY A Q+G GE   K V+KP
Sbjct: 4   ILGKKIGMTRLYNNKREAVPCTVIQAGPCFVAQVKSTEKDGYDAYQLGFGERDEKKVTKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + G +     +P   L E         L  G+  +   FT G++VDV G+T GKGF+G +
Sbjct: 64  LAGHYKKAGKTPGYLLSEVSKSLIAGELEAGATVAVDVFTEGEIVDVLGVTKGKGFAGVV 123

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHNFGG   THG S   R+ GS G   DP R FK  +MAGRMGG   TV+NLE+V V  
Sbjct: 124 KRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFKGTRMAGRMGGENKTVRNLEIVKVMP 183

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
           +  LI+VKG VPG  KNS++ +  + K
Sbjct: 184 ESNLIVVKGAVPGP-KNSYVKIVSTTK 209


>gi|319760329|ref|YP_004124267.1| 50S ribosomal protein L3 [Candidatus Blochmannia vafer str. BVAF]
 gi|318039043|gb|ADV33593.1| 50S ribosomal protein L3 [Candidatus Blochmannia vafer str. BVAF]
          Length = 217

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 90/208 (43%), Positives = 133/208 (63%), Gaps = 2/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT ++  +G  IPVT++ +    V+  + L ++GY AVQV  G +KV  ++K
Sbjct: 3   GLIGRKLGMTRLFGEDGVSIPVTMVEVLPNHVIQIKNLKRDGYCAVQVTTGHSKVNCLNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G      V P K L+EFRV   D  + +G V +   F   + VDVTG++ GKGFSG 
Sbjct: 63  PQLGHLKKAGVKPGKGLWEFRV-NSDSTISLGDVITIEIFKNAKEVDVTGISKGKGFSGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    A+HG S+SHR+ GS G  Q PG+VFK KKMAG++G +RVTV+NL++++V+
Sbjct: 122 IKRWNFHTQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQLGNSRVTVQNLKIINVN 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
               ++L+KG +PG      ++V+ S K
Sbjct: 182 LNDNVLLIKGAIPGTI-GEHVIVKKSIK 208


>gi|227431341|ref|ZP_03913394.1| ribosomal protein L3 [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227352934|gb|EEJ43107.1| ribosomal protein L3 [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 228

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 84/219 (38%), Positives = 119/219 (54%), Gaps = 8/219 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  I VT +      V+  +  + +GY A+Q+G  + +   
Sbjct: 1   MTKGILGRKVGMTQVFTESGELIAVTAVEATPNVVLQVKNAETDGYGAIQLGYQDKRTVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  S  N +PK+ + E  ++   D   VG       F  G+ VDVTG+T G GF
Sbjct: 61  SNKPEQGHASKANTAPKRYVRE--IRNAGDEFNVGDEIKVDTFQAGEYVDVTGITKGHGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR        THG S  HR  GS G      RVFK K + GRMG N+ T++N+ VV
Sbjct: 119 QGAIKRLGQSRGPMTHG-SRYHRRPGSMGAI--INRVFKGKLLPGRMGNNKRTMQNIAVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            VD ++ L+L+KG VPGA K S + V+ + K  VN K  
Sbjct: 176 HVDVEKNLLLLKGNVPGANK-SLLTVKSTVK--VNAKHP 211


>gi|259500892|ref|ZP_05743794.1| 50S ribosomal protein L3 [Lactobacillus iners DSM 13335]
 gi|302190655|ref|ZP_07266909.1| 50S ribosomal protein L3 [Lactobacillus iners AB-1]
 gi|309803703|ref|ZP_07697793.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 11V1-d]
 gi|309804974|ref|ZP_07699032.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 09V1-c]
 gi|309806693|ref|ZP_07700688.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 03V1-b]
 gi|309808420|ref|ZP_07702319.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 01V1-a]
 gi|309809118|ref|ZP_07702991.1| 50S ribosomal protein L3 [Lactobacillus iners SPIN 2503V10-D]
 gi|312871230|ref|ZP_07731328.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 3008A-a]
 gi|312872706|ref|ZP_07732771.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2062A-h1]
 gi|312874007|ref|ZP_07734042.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2052A-d]
 gi|312874981|ref|ZP_07735000.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2053A-b]
 gi|315654026|ref|ZP_07906942.1| 50S ribosomal protein L3 [Lactobacillus iners ATCC 55195]
 gi|325912351|ref|ZP_08174747.1| 50S ribosomal protein L3 [Lactobacillus iners UPII 143-D]
 gi|325913214|ref|ZP_08175583.1| 50S ribosomal protein L3 [Lactobacillus iners UPII 60-B]
 gi|329920622|ref|ZP_08277309.1| 50S ribosomal protein L3 [Lactobacillus iners SPIN 1401G]
 gi|259167586|gb|EEW52081.1| 50S ribosomal protein L3 [Lactobacillus iners DSM 13335]
 gi|308164301|gb|EFO66558.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 11V1-d]
 gi|308165734|gb|EFO67959.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 09V1-c]
 gi|308166873|gb|EFO69057.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 03V1-b]
 gi|308168248|gb|EFO70367.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 01V1-a]
 gi|308170563|gb|EFO72583.1| 50S ribosomal protein L3 [Lactobacillus iners SPIN 2503V10-D]
 gi|311089726|gb|EFQ48151.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2053A-b]
 gi|311090347|gb|EFQ48756.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2052A-d]
 gi|311091748|gb|EFQ50127.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2062A-h1]
 gi|311093244|gb|EFQ51590.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 3008A-a]
 gi|315488722|gb|EFU78368.1| 50S ribosomal protein L3 [Lactobacillus iners ATCC 55195]
 gi|325475822|gb|EGC78992.1| 50S ribosomal protein L3 [Lactobacillus iners UPII 143-D]
 gi|325477478|gb|EGC80621.1| 50S ribosomal protein L3 [Lactobacillus iners UPII 60-B]
 gi|328935880|gb|EGG32340.1| 50S ribosomal protein L3 [Lactobacillus iners SPIN 1401G]
          Length = 209

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 82/213 (38%), Positives = 120/213 (56%), Gaps = 5/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V++  G  +PVTV+      V+  +T + +GY AVQVG  + +   
Sbjct: 1   MTKGILGRKVGMTQVFSKNGILVPVTVIEATPNVVLQVKTNESDGYEAVQVGYQDVREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    +PK+ + E R   + +   VGS      F+ G +VDVTG + G G 
Sbjct: 61  SNKPAKGHAAKAKTAPKRFIREIR-DVELEGYEVGSEIKVDTFSEGDVVDVTGTSKGHGT 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR        THG S  HR  GS G      RV K KK+ G MGG +VTV+NL + 
Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKKLPGHMGGKQVTVQNLVIE 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ ++L+KG VPGA KNS I+V+ + K+A
Sbjct: 177 KVVPEKNVLLIKGNVPGA-KNSLIIVKSAVKAA 208


>gi|227538718|ref|ZP_03968767.1| ribosomal protein L3 [Sphingobacterium spiritivorum ATCC 33300]
 gi|300770251|ref|ZP_07080130.1| 50S ribosomal protein L3 [Sphingobacterium spiritivorum ATCC 33861]
 gi|227241637|gb|EEI91652.1| ribosomal protein L3 [Sphingobacterium spiritivorum ATCC 33300]
 gi|300762727|gb|EFK59544.1| 50S ribosomal protein L3 [Sphingobacterium spiritivorum ATCC 33861]
          Length = 205

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 98/205 (47%), Positives = 132/205 (64%), Gaps = 4/205 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +YN EG+ IP TV+    C V   RT DK+GY AVQ+G GEAK KN +
Sbjct: 2   SGIIGKKVGMTSLYNEEGKNIPCTVIEAGPCVVTQIRTEDKDGYSAVQLGFGEAKEKNTT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
             ++G F+  N +PK+KL EF+   D+    +G V   + F  G+ VDV G + GKGF G
Sbjct: 62  ASLKGHFAKANTTPKRKLVEFKTFPDE--KQLGDVVDVTIFEEGEYVDVVGTSKGKGFQG 119

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            MKRH FGG   ATHG     R+ GS G    P RVFK  +MAGR GG+RV V+NL+V+ 
Sbjct: 120 VMKRHGFGGVGGATHGQHNRLRAPGSLGASSWPSRVFKGMRMAGRTGGDRVKVQNLQVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           V  ++ LI+V G +PGA K S+++V
Sbjct: 180 VYAEQNLIVVSGSIPGA-KGSYVIV 203


>gi|227888853|ref|ZP_04006658.1| 50S ribosomal protein L3 [Lactobacillus johnsonii ATCC 33200]
 gi|227850690|gb|EEJ60776.1| 50S ribosomal protein L3 [Lactobacillus johnsonii ATCC 33200]
          Length = 209

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 84/213 (39%), Positives = 119/213 (55%), Gaps = 5/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++   G  +PVTV+      V+  +T + +GY AVQVG  + +   
Sbjct: 1   MTKGILGRKVGMTQIFTKNGVLVPVTVIEATPNVVLQVKTNESDGYEAVQVGYQDMREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    SPK+ + E R  +  D   VGS  +   F+ G +VDVTG T G G 
Sbjct: 61  SNKPAKGHAAKAKTSPKRFIREIRDVELKD-YEVGSEITVDSFSEGDVVDVTGTTRGHGT 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR        THG S  HR  GS G      RV K KK+ G MGG +VTV+NL + 
Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKKLPGHMGGKKVTVQNLVIE 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ ++L+KG VPGA KNS I V+ + K+A
Sbjct: 177 KVVPEKNVLLIKGNVPGA-KNSLIFVKSAAKAA 208


>gi|194099923|ref|YP_002003061.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae NCCP11945]
 gi|193935213|gb|ACF31037.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae NCCP11945]
 gi|317165376|gb|ADV08917.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 203

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 98/201 (48%), Positives = 126/201 (62%), Gaps = 2/201 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   V+K   G F+ 
Sbjct: 1   MTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANRVNKAEAGHFAK 60

Query: 72  VNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
             V   + L EF + ++    L  G   + S F VGQLVDVTG + GKGFSG +KRHNFG
Sbjct: 61  AGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKGFSGTIKRHNFG 120

Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
             R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  + TV+ LEVV VD +R L+L
Sbjct: 121 AQRTSHGNSRSHRVPGSIGVAQDPGRVFPGKRMAGQYGNTKATVQKLEVVRVDAERQLLL 180

Query: 191 VKGCVPGAKKNSWILVRDSFK 211
           VKG VPGA  NS ++VR S K
Sbjct: 181 VKGAVPGAV-NSDVVVRPSVK 200


>gi|329314933|gb|AEB89346.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
           T0131]
          Length = 220

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 93/221 (42%), Positives = 122/221 (55%), Gaps = 11/221 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY A+QVG        
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYK 60

Query: 54  -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
                 K  +KP  G     + +PK+ + EFR   D D   VG   S   F  G ++DVT
Sbjct: 61  KDAKSNKYANKPAEGHAKKADAAPKRFIREFR-NVDVDAYEVGQEVSVDTFVAGDVIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF G +KRH       +HG    HR+ GS G   D  RVFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGGIKRHGQSRGPMSHGSH-FHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           TV+NLEVV VD +  +ILVKG VPG KK   + +R S K  
Sbjct: 179 TVQNLEVVQVDTENKVILVKGNVPGPKKG-LVEIRTSIKKG 218


>gi|241888995|ref|ZP_04776299.1| 50S ribosomal protein L3 [Gemella haemolysans ATCC 10379]
 gi|329768273|ref|ZP_08259774.1| 50S ribosomal protein L3 [Gemella haemolysans M341]
 gi|241864244|gb|EER68622.1| 50S ribosomal protein L3 [Gemella haemolysans ATCC 10379]
 gi|328837472|gb|EGF87101.1| 50S ribosomal protein L3 [Gemella haemolysans M341]
          Length = 220

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 89/223 (39%), Positives = 124/223 (55%), Gaps = 14/223 (6%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++   G  IPVTV+      V+  +T +  GY A+Q+G  + +  +
Sbjct: 1   MTKGILGRKVGMTQIFAENGELIPVTVVEAKGNVVLQKKTEEVEGYNAIQLGFDDKRPYD 60

Query: 61  V----------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
                      +KP +G     N +PK+ + E R   +     VG       F  G LVD
Sbjct: 61  KERKDRLVKVANKPEQGHADKANTAPKRFVREIR-DAEVANYEVGQEVQVDIFAAGDLVD 119

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           VTG++ GKGF GA+KRH        HG S  HR  GS G    P RVFK K + G+MGG 
Sbjct: 120 VTGVSKGKGFQGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKALPGQMGGV 177

Query: 171 RVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            VT +NLE+VSVD + GLILVKGC+PG+KK S++ ++ + KS 
Sbjct: 178 TVTTQNLEIVSVDVENGLILVKGCIPGSKK-SFVKIQSAVKSG 219


>gi|282852649|ref|ZP_06261991.1| 50S ribosomal protein L3 [Lactobacillus gasseri 224-1]
 gi|282556391|gb|EFB62011.1| 50S ribosomal protein L3 [Lactobacillus gasseri 224-1]
          Length = 209

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 85/213 (39%), Positives = 119/213 (55%), Gaps = 5/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++   G  +PVTV+      V+  +T + +GY AVQVG  + +   
Sbjct: 1   MTKGILGRKVGMTQIFTKNGILVPVTVIEATPNVVLQVKTNESDGYEAVQVGYQDMREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    SPK+ + E R  +  D   VGS  +   F+ G +VDVTG T G G 
Sbjct: 61  SNKPAKGHAAKAKTSPKRFIREIRDVELKD-YEVGSEITVDSFSEGDVVDVTGTTRGHGT 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR        THG S  HR  GS G      RV K KK+ G MGG +VTV+NL + 
Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKKLPGHMGGKKVTVQNLVIE 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ ++LVKG VPGA KNS I V+ + K+A
Sbjct: 177 KVAPEKNVLLVKGNVPGA-KNSLIFVKSAAKAA 208


>gi|111220546|ref|YP_711340.1| 50S ribosomal protein L3 [Frankia alni ACN14a]
 gi|123339021|sp|Q0RRS1|RL3_FRAAA RecName: Full=50S ribosomal protein L3
 gi|111148078|emb|CAJ59746.1| 50S ribosomal subunit protein L3 [Frankia alni ACN14a]
          Length = 234

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 92/209 (44%), Positives = 122/209 (58%), Gaps = 2/209 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+      V   +T D +GY AVQ+G GE   + ++K
Sbjct: 8   GLLGTKLGMTQVWDANNRVVPVTVIKAGPNVVTQVKTPDSDGYSAVQLGYGEIDPRKINK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P RG F++  V+P++ L E R     +  P G   +   F  G +VDVTG + GKGF+G 
Sbjct: 68  PARGHFATSGVTPRRHLVELRTADAGNYRP-GQELTGEVFAEGTVVDVTGTSKGKGFAGV 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F GL A HGV   HRS GS G    PGRVFK  +MAGRMG  R T   L + +VD
Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGHARTTTPGLTIHAVD 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +RG +LVKG +PG      + VR + K 
Sbjct: 187 TERGFLLVKGAIPGPD-GGLVFVRSAAKR 214


>gi|42518429|ref|NP_964359.1| 50S ribosomal protein L3 [Lactobacillus johnsonii NCC 533]
 gi|268318851|ref|YP_003292507.1| ribosomal protein L3 [Lactobacillus johnsonii FI9785]
 gi|300362389|ref|ZP_07058565.1| 50S ribosomal protein L3 [Lactobacillus gasseri JV-V03]
 gi|81832300|sp|Q74L88|RL3_LACJO RecName: Full=50S ribosomal protein L3
 gi|41582714|gb|AAS08325.1| 50S ribosomal protein L3 [Lactobacillus johnsonii NCC 533]
 gi|262397226|emb|CAX66240.1| ribosomal protein L3 [Lactobacillus johnsonii FI9785]
 gi|300353380|gb|EFJ69252.1| 50S ribosomal protein L3 [Lactobacillus gasseri JV-V03]
 gi|329666692|gb|AEB92640.1| 50S ribosomal protein L3 [Lactobacillus johnsonii DPC 6026]
          Length = 209

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 84/213 (39%), Positives = 119/213 (55%), Gaps = 5/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++   G  +PVTV+      V+  +T + +GY AVQVG  + +   
Sbjct: 1   MTKGILGRKVGMTQIFTKNGILVPVTVIEATPNVVLQVKTNESDGYEAVQVGYQDMREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    SPK+ + E R  +  D   VGS  +   F+ G +VDVTG T G G 
Sbjct: 61  SNKPAKGHAAKAKTSPKRFIREIRDVELKD-YEVGSEITVDSFSEGDVVDVTGTTRGHGT 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR        THG S  HR  GS G      RV K KK+ G MGG +VTV+NL + 
Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKKLPGHMGGKKVTVQNLVIE 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ ++L+KG VPGA KNS I V+ + K+A
Sbjct: 177 KVVPEKNVLLIKGNVPGA-KNSLIFVKSAAKAA 208


>gi|291298710|ref|YP_003509988.1| 50S ribosomal protein L3 [Stackebrandtia nassauensis DSM 44728]
 gi|290567930|gb|ADD40895.1| ribosomal protein L3 [Stackebrandtia nassauensis DSM 44728]
          Length = 220

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 97/216 (44%), Positives = 127/216 (58%), Gaps = 2/216 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++  KLGMT V++   R +PVTV+    C V   RT D +GY AVQ+  G+   + V+K
Sbjct: 7   GILGTKLGMTQVWDENNRVVPVTVVQAGPCVVTQVRTPDTDGYSAVQLAFGQIDPRKVNK 66

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F+   V+P++ + E R   D      G   +   F  G LVDVTG T GKG++G 
Sbjct: 67  PLSGHFAKAEVAPRRHVVELRTT-DATEYSAGDEITVDRFETGGLVDVTGKTKGKGYAGV 125

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH FGGL A HGV   HRS GS G    PGRVFK  +MAGRMGG R TV+NL++ +VD
Sbjct: 126 MKRHGFGGLGAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGGVRHTVQNLKIHAVD 185

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
               L+L+KG +PG      +LVR + K A     K
Sbjct: 186 ADNNLLLIKGALPGP-TGGLVLVRGAVKVAAKGGAK 220


>gi|228898863|ref|ZP_04063145.1| 50S ribosomal protein L3 [Bacillus thuringiensis IBL 4222]
 gi|228905907|ref|ZP_04069804.1| 50S ribosomal protein L3 [Bacillus thuringiensis IBL 200]
 gi|228937413|ref|ZP_04100059.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228963210|ref|ZP_04124379.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228976869|ref|ZP_04137281.1| 50S ribosomal protein L3 [Bacillus thuringiensis Bt407]
 gi|229009619|ref|ZP_04166845.1| 50S ribosomal protein L3 [Bacillus mycoides DSM 2048]
 gi|229015512|ref|ZP_04172510.1| 50S ribosomal protein L3 [Bacillus cereus AH1273]
 gi|229021721|ref|ZP_04178303.1| 50S ribosomal protein L3 [Bacillus cereus AH1272]
 gi|229027958|ref|ZP_04184111.1| 50S ribosomal protein L3 [Bacillus cereus AH1271]
 gi|229074171|ref|ZP_04207217.1| 50S ribosomal protein L3 [Bacillus cereus Rock4-18]
 gi|229083430|ref|ZP_04215778.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-44]
 gi|229094832|ref|ZP_04225837.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-29]
 gi|229100909|ref|ZP_04231713.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-28]
 gi|229113786|ref|ZP_04243221.1| 50S ribosomal protein L3 [Bacillus cereus Rock1-3]
 gi|229165098|ref|ZP_04292893.1| 50S ribosomal protein L3 [Bacillus cereus AH621]
 gi|229170961|ref|ZP_04298562.1| 50S ribosomal protein L3 [Bacillus cereus MM3]
 gi|228612501|gb|EEK69722.1| 50S ribosomal protein L3 [Bacillus cereus MM3]
 gi|228618361|gb|EEK75391.1| 50S ribosomal protein L3 [Bacillus cereus AH621]
 gi|228669657|gb|EEL25064.1| 50S ribosomal protein L3 [Bacillus cereus Rock1-3]
 gi|228682488|gb|EEL36561.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-28]
 gi|228688575|gb|EEL42448.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-29]
 gi|228699863|gb|EEL52500.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-44]
 gi|228708941|gb|EEL61068.1| 50S ribosomal protein L3 [Bacillus cereus Rock4-18]
 gi|228733346|gb|EEL84175.1| 50S ribosomal protein L3 [Bacillus cereus AH1271]
 gi|228739589|gb|EEL90003.1| 50S ribosomal protein L3 [Bacillus cereus AH1272]
 gi|228745799|gb|EEL95803.1| 50S ribosomal protein L3 [Bacillus cereus AH1273]
 gi|228751641|gb|EEM01441.1| 50S ribosomal protein L3 [Bacillus mycoides DSM 2048]
 gi|228782839|gb|EEM31005.1| 50S ribosomal protein L3 [Bacillus thuringiensis Bt407]
 gi|228796468|gb|EEM43907.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228822246|gb|EEM68228.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228853722|gb|EEM98482.1| 50S ribosomal protein L3 [Bacillus thuringiensis IBL 200]
 gi|228860763|gb|EEN05141.1| 50S ribosomal protein L3 [Bacillus thuringiensis IBL 4222]
          Length = 199

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 88/200 (44%), Positives = 124/200 (62%), Gaps = 4/200 (2%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V+   G  IPVTV+  +   V+  +T + +GY A+Q+G  + + K  +KP +G  + 
Sbjct: 1   MTQVFAENGELIPVTVIAANPNVVLQKKTTETDGYNAIQLGFEDKREKLTNKPEQGHTAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
            + +PK+ + E R   D D L VG       F  G++VDVTG++ GKGF G +KRH    
Sbjct: 61  ASTTPKRFIREIR-DADVDGLEVGQEVKVEVFAAGEIVDVTGISKGKGFQGVIKRHGQSR 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
              +HG S  HR  GS G    P RVFK KK+AGRMGG++VT++NLE+V VD +R L+LV
Sbjct: 120 GPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIVQVDTERNLLLV 177

Query: 192 KGCVPGAKKNSWILVRDSFK 211
           KG VPGAKK S ++V+ + K
Sbjct: 178 KGNVPGAKK-SLVVVQGAVK 196


>gi|116628963|ref|YP_814135.1| 50S ribosomal protein L3 [Lactobacillus gasseri ATCC 33323]
 gi|238853483|ref|ZP_04643861.1| 50S ribosomal protein L3 [Lactobacillus gasseri 202-4]
 gi|122274039|sp|Q046C5|RL3_LACGA RecName: Full=50S ribosomal protein L3
 gi|116094545|gb|ABJ59697.1| LSU ribosomal protein L3P [Lactobacillus gasseri ATCC 33323]
 gi|238833923|gb|EEQ26182.1| 50S ribosomal protein L3 [Lactobacillus gasseri 202-4]
          Length = 209

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 85/213 (39%), Positives = 119/213 (55%), Gaps = 5/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++   G  +PVTV+      V+  +T + +GY AVQVG  + +   
Sbjct: 1   MTKGILGRKVGMTQIFTKNGILVPVTVIEATPNVVLQVKTNESDGYEAVQVGYQDMREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    SPK+ + E R  +  D   VGS  +   F+ G +VDVTG T G G 
Sbjct: 61  SNKPAKGHAAKAKTSPKRFIREIRDVELKD-YEVGSEITVDSFSEGDVVDVTGTTRGHGT 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR        THG S  HR  GS G      RV K KK+ G MGG +VTV+NL + 
Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKKLPGHMGGKKVTVQNLVIE 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V  ++ ++LVKG VPGA KNS I V+ + K+A
Sbjct: 177 KVVPEKNVLLVKGNVPGA-KNSLIFVKSAAKAA 208


>gi|86141140|ref|ZP_01059686.1| 50S ribosomal protein L3 [Leeuwenhoekiella blandensis MED217]
 gi|85831699|gb|EAQ50154.1| 50S ribosomal protein L3 [Leeuwenhoekiella blandensis MED217]
          Length = 203

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 82/205 (40%), Positives = 121/205 (59%), Gaps = 6/205 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C V   RT + +GY A+Q+G  +AK    +
Sbjct: 2   SGLIGKKVGMTSIFDENGKNIPCTVIEAGPCVVTQVRTEEVDGYSALQLGFDDAKTA--N 59

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K  +G         K+K+ EF+    +    +G   +   F  GQ VDV G + GKGF G
Sbjct: 60  KAAQGHAKKAGTVAKRKVVEFQ--DFEGEYKLGDAVTVEVFKEGQFVDVAGTSKGKGFQG 117

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG  ++THG     R+ GS G    P RVFK  +MAG+MG  RV V+NL V+ 
Sbjct: 118 VVKRHGFGGVGQSTHGQHNRLRAPGSIGAASYPSRVFKGMRMAGQMGNERVKVQNLRVLK 177

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           V  ++ L++VKGCVPG  KNS++++
Sbjct: 178 VVAEKNLLVVKGCVPG-HKNSYVII 201


>gi|218245140|ref|YP_002370511.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 8801]
 gi|257058165|ref|YP_003136053.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 8802]
 gi|226725160|sp|B7K335|RL3_CYAP8 RecName: Full=50S ribosomal protein L3
 gi|218165618|gb|ACK64355.1| ribosomal protein L3 [Cyanothece sp. PCC 8801]
 gi|256588331|gb|ACU99217.1| ribosomal protein L3 [Cyanothece sp. PCC 8802]
          Length = 212

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 85/211 (40%), Positives = 120/211 (56%), Gaps = 4/211 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT +++   G  IPVTV+    C V   +T D +GY A+QVG  E K K
Sbjct: 1   MAVGILGTKLGMTQIFDQETGMAIPVTVVQAGPCTVTQVKTPDTDGYTAIQVGYHEVKEK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++K   G    ++  P + L E+R+  D     +G       F  G LVDV+G ++G+G
Sbjct: 61  ALTKAEIGHLKKIDAPPLRHLKEYRLD-DSSQYQLGDAIKADIFNPGDLVDVSGKSMGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G  KRHNF     THG S +HR  GSTG    PGRV+  K+MAG+ G  +VT+++L V
Sbjct: 120 FAGYQKRHNFKRGNMTHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGQYGATQVTIRHLTV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           V VD  R LILVKG +PG    + + +  + 
Sbjct: 179 VRVDSDRNLILVKGAIPGKP-GTLLNITPAK 208


>gi|28377832|ref|NP_784724.1| 50S ribosomal protein L3 [Lactobacillus plantarum WCFS1]
 gi|300767821|ref|ZP_07077731.1| 50S ribosomal protein L3 [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308180011|ref|YP_003924139.1| 50S ribosomal protein L3 [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|42559624|sp|Q88XY6|RL3_LACPL RecName: Full=50S ribosomal protein L3
 gi|28270665|emb|CAD63571.1| ribosomal protein L3 [Lactobacillus plantarum WCFS1]
 gi|300494806|gb|EFK29964.1| 50S ribosomal protein L3 [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308045502|gb|ADN98045.1| 50S ribosomal protein L3 [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 209

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 117/211 (55%), Gaps = 5/211 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
             G++ +K+GMT V+   G  +PVTV+ +    V+  +T++ +GY A+Q+G  + +    
Sbjct: 3   TKGILGKKVGMTQVFTESGELVPVTVVEVQPNVVLQVKTVENDGYEAIQLGVDDKREVLT 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP +G  +    +PK+ + E R  +  D   VG       F  G  VDVTG+T G G+ 
Sbjct: 63  NKPAQGHAAKAKTTPKRFIREIRNVELGD-YTVGDEVKADIFAAGDAVDVTGITKGHGYQ 121

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G + +         HG S  HR  GS G      RVFK KK+ GRMG ++ T++NL++V 
Sbjct: 122 GNIHKDGQSRGPMAHG-SRYHRRPGSMGAI--INRVFKGKKLPGRMGNHQRTMQNLQIVR 178

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            D +  ++L+KG VPGA K S++ V+ S KS
Sbjct: 179 ADVENNVLLIKGNVPGANK-SFVTVKTSVKS 208


>gi|71891975|ref|YP_277705.1| 50S ribosomal subunit protein L3 [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|109893412|sp|Q493K8|RL3_BLOPB RecName: Full=50S ribosomal protein L3
 gi|71796081|gb|AAZ40832.1| 50S ribosomal subunit protein L3 [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 217

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 86/216 (39%), Positives = 133/216 (61%), Gaps = 2/216 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +KLGMT +++ +G  IPVT++ +   +V   + ++ +GY AVQV  G    K+++
Sbjct: 2   KGLIGQKLGMTRLFDKDGVSIPVTMIEITPHRVTQIKNIENDGYCAVQVTTGMKNFKHIN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +P  G      V   + ++EFR ++     L +G + +   F   + VD+TG++ GKGF+
Sbjct: 62  RPETGHMIKSGVDAGRGVWEFRCEEAGMPQLSLGDIITIQIFKNVKKVDITGISKGKGFA 121

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR NF    A+HG S+SHR+ GS G  Q PGRVFK KKMAG++G  +VTV+NL+VV+
Sbjct: 122 GTIKRWNFHMQDASHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGQLGNYKVTVQNLDVVN 181

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           VD K  L+LVKG VPG    +   ++ S K  +  K
Sbjct: 182 VDVKLNLLLVKGAVPGTIGGNL-SIKKSVKINIREK 216


>gi|323344636|ref|ZP_08084860.1| 50S ribosomal protein L3 [Prevotella oralis ATCC 33269]
 gi|323093906|gb|EFZ36483.1| 50S ribosomal protein L3 [Prevotella oralis ATCC 33269]
          Length = 204

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 82/205 (40%), Positives = 123/205 (60%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V++ +G+  P TV+ +  C V   +T++K+GY AVQ+G GEAK K  + 
Sbjct: 3   GLIGRKIGMTSVFSADGKNTPCTVIEIGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTTM 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           PM G F     +PKK L EF+  ++     +G   +   F   + VDV G + GKGF G 
Sbjct: 63  PMMGIFKKAGTTPKKHLAEFKFDEE---YNLGDTLTVELFEGTEFVDVIGTSKGKGFQGV 119

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  ++THG     R  GS G    P +VFK  +MAG+MGG+RVT +NL V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLRVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             ++ L++VKG   G   ++ ++ +
Sbjct: 180 IPEQNLLIVKGSFAGCNGSTVLIEK 204


>gi|228925363|ref|ZP_04088459.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228931612|ref|ZP_04094518.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228943916|ref|ZP_04106301.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228950658|ref|ZP_04112792.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228956551|ref|ZP_04118347.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229041015|ref|ZP_04189778.1| 50S ribosomal protein L3 [Bacillus cereus AH676]
 gi|229067875|ref|ZP_04201192.1| 50S ribosomal protein L3 [Bacillus cereus F65185]
 gi|229077410|ref|ZP_04210063.1| 50S ribosomal protein L3 [Bacillus cereus Rock4-2]
 gi|229107796|ref|ZP_04237432.1| 50S ribosomal protein L3 [Bacillus cereus Rock1-15]
 gi|229119772|ref|ZP_04249033.1| 50S ribosomal protein L3 [Bacillus cereus 95/8201]
 gi|229125627|ref|ZP_04254659.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-Cer4]
 gi|229136956|ref|ZP_04265583.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST26]
 gi|229142916|ref|ZP_04271357.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST24]
 gi|229148519|ref|ZP_04276775.1| 50S ribosomal protein L3 [Bacillus cereus m1550]
 gi|229159283|ref|ZP_04287307.1| 50S ribosomal protein L3 [Bacillus cereus R309803]
 gi|229176710|ref|ZP_04304114.1| 50S ribosomal protein L3 [Bacillus cereus 172560W]
 gi|228606753|gb|EEK64170.1| 50S ribosomal protein L3 [Bacillus cereus 172560W]
 gi|228624175|gb|EEK80977.1| 50S ribosomal protein L3 [Bacillus cereus R309803]
 gi|228634935|gb|EEK91508.1| 50S ribosomal protein L3 [Bacillus cereus m1550]
 gi|228640537|gb|EEK96926.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST24]
 gi|228646494|gb|EEL02701.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST26]
 gi|228657819|gb|EEL13625.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-Cer4]
 gi|228663673|gb|EEL19252.1| 50S ribosomal protein L3 [Bacillus cereus 95/8201]
 gi|228675645|gb|EEL30853.1| 50S ribosomal protein L3 [Bacillus cereus Rock1-15]
 gi|228705901|gb|EEL58234.1| 50S ribosomal protein L3 [Bacillus cereus Rock4-2]
 gi|228715234|gb|EEL67093.1| 50S ribosomal protein L3 [Bacillus cereus F65185]
 gi|228727312|gb|EEL78506.1| 50S ribosomal protein L3 [Bacillus cereus AH676]
 gi|228803116|gb|EEM49938.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228809009|gb|EEM55494.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228815749|gb|EEM61985.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228828040|gb|EEM73768.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228834285|gb|EEM79826.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 199

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 88/200 (44%), Positives = 124/200 (62%), Gaps = 4/200 (2%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V+   G  IPVTV+  +   V+  +T + +GY A+Q+G  + + K  +KP +G  + 
Sbjct: 1   MTQVFAENGELIPVTVIAANPNVVLQKKTTETDGYNAIQLGFEDKREKLTNKPEQGHTAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
            + +PK+ + E R   D D L VG       F  G++VDVTG++ GKGF G +KRH    
Sbjct: 61  ASTTPKRFIREIR-DADVDGLEVGQEVKVDVFATGEIVDVTGISKGKGFQGVIKRHGQSR 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
              +HG S  HR  GS G    P RVFK KK+AGRMGG++VT++NLE+V VD +R L+LV
Sbjct: 120 GPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIVQVDTERNLLLV 177

Query: 192 KGCVPGAKKNSWILVRDSFK 211
           KG VPGAKK S ++V+ + K
Sbjct: 178 KGNVPGAKK-SLVVVQGAVK 196


>gi|254556017|ref|YP_003062434.1| 50S ribosomal protein L3 [Lactobacillus plantarum JDM1]
 gi|254044944|gb|ACT61737.1| 50S ribosomal protein L3 [Lactobacillus plantarum JDM1]
          Length = 209

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 117/211 (55%), Gaps = 5/211 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
             G++ +K+GMT V+   G  +PVTV+ +    V+  +T++ +GY A+Q+G  + +    
Sbjct: 3   TKGILGQKVGMTQVFTESGELVPVTVVEVQPNVVLQVKTVENDGYEAIQLGVDDKREVLT 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP +G  +    +PK+ + E R  +  D   VG       F  G  VDVTG+T G G+ 
Sbjct: 63  NKPAQGHAAKAKTTPKRFIREIRNVELGD-YTVGDEVKADIFAAGDAVDVTGITKGHGYQ 121

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G + +         HG S  HR  GS G      RVFK KK+ GRMG ++ T++NL++V 
Sbjct: 122 GNIHKDGQSRGPMAHG-SRYHRRPGSMGAI--INRVFKGKKLPGRMGNHQRTMQNLQIVR 178

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            D +  ++L+KG VPGA K S++ V+ S KS
Sbjct: 179 ADVENNVLLIKGNVPGANK-SFVTVKTSVKS 208


>gi|15805340|ref|NP_294034.1| 50S ribosomal protein L3 [Deinococcus radiodurans R1]
 gi|42559707|sp|Q9RXK2|RL3_DEIRA RecName: Full=50S ribosomal protein L3
 gi|28948921|pdb|1NKW|B Chain B, Crystal Structure Of The Large Ribosomal Subunit From
           Deinococcus Radiodurans
 gi|29726789|pdb|1NWX|B Chain B, Complex Of The Large Ribosomal Subunit From Deinococcus
           Radiodurans With Abt-773
 gi|29726820|pdb|1NWY|B Chain B, Complex Of The Large Ribosomal Subunit From Deinococcus
           Radiodurans With Azithromycin
 gi|51247374|pdb|1SM1|B Chain B, Complex Of The Large Ribosomal Subunit From Deinococcus
           Radiodurans With Quinupristin And Dalfopristin
 gi|61680337|pdb|1XBP|B Chain B, Inhibition Of Peptide Bond Formation By Pleuromutilins:
           The Structure Of The 50s Ribosomal Subunit From
           Deinococcus Radiodurans In Complex With Tiamulin
 gi|146386617|pdb|2OGM|B Chain B, The Crystal Structure Of The Large Ribosomal Subunit From
           Deinococcus Radiodurans Complexed With The Pleuromutilin
           Derivative Sb-571519
 gi|146386619|pdb|2OGN|B Chain B, The Crystal Structure Of The Large Ribosomal Subunit From
           Deinococcus Radiodurans Complexed With The Pleuromutilin
           Derivative Sb-280080
 gi|146386621|pdb|2OGO|B Chain B, The Crystal Structure Of The Large Ribosomal Subunit From
           Deinococcus Radiodurans Complexed With The Pleuromutilin
           Derivative Retapamulin (Sb-275833)
 gi|190613491|pdb|2ZJP|B Chain B, Thiopeptide Antibiotic Nosiheptide Bound To The Large
           Ribosomal Subunit Of Deinococcus Radiodurans
 gi|190613521|pdb|2ZJQ|B Chain B, Interaction Of L7 With L11 Induced By Microccocin Binding
           To The Deinococcus Radiodurans 50s Subunit
 gi|190613552|pdb|2ZJR|B Chain B, Refined Native Structure Of The Large Ribosomal Subunit
           (50s) From Deinococcus Radiodurans
 gi|190613659|pdb|3CF5|B Chain B, Thiopeptide Antibiotic Thiostrepton Bound To The Large
           Ribosomal Subunit Of Deinococcus Radiodurans
 gi|203282458|pdb|3DLL|B Chain B, The Oxazolidinone Antibiotics Perturb The Ribosomal
           Peptidyl-Transferase Center And Effect Trna Positioning
 gi|323714542|pdb|3PIO|B Chain B, Crystal Structure Of The Synergistic Antibiotic Pair
           Lankamycin And Lankacidin In Complex With The Large
           Ribosomal Subunit
 gi|323714572|pdb|3PIP|B Chain B, Crystal Structure Of The Synergistic Antibiotic Pair
           Lankamycin And Lankacidin In Complex With The Large
           Ribosomal Subunit
 gi|6457985|gb|AAF09892.1|AE001892_3 ribosomal protein L3 [Deinococcus radiodurans R1]
          Length = 211

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 88/203 (43%), Positives = 116/203 (57%), Gaps = 6/203 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  K+GMT ++    R IPVTV+    C +V  +T   +GY AVQ+G      + V+
Sbjct: 2   KGILGTKIGMTQIW-KNDRAIPVTVVLAGPCPIVQRKTAQTDGYEAVQIGYAPKAERKVN 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KPM+G F+   V+P + L EFR        P G   +   F  G+ +D TG + GKG  G
Sbjct: 61  KPMQGHFAKAGVAPTRILREFR-----GFAPDGDSVNVDIFAEGEKIDATGTSKGKGTQG 115

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKR NF G  A+HG    HR  GS G R+ PGRV+K K+MAG MG  RVTV+NLEVV +
Sbjct: 116 VMKRWNFAGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGHMGMERVTVQNLEVVEI 175

Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205
                LILVKG +PGA     +L
Sbjct: 176 RAGENLILVKGAIPGANGGLVVL 198


>gi|154249817|ref|YP_001410642.1| 50S ribosomal protein L3 [Fervidobacterium nodosum Rt17-B1]
 gi|171769379|sp|A7HM52|RL3_FERNB RecName: Full=50S ribosomal protein L3
 gi|154153753|gb|ABS60985.1| ribosomal protein L3 [Fervidobacterium nodosum Rt17-B1]
          Length = 207

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 91/207 (43%), Positives = 128/207 (61%), Gaps = 4/207 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ARK+GMT ++  + + +PVTVL    C VV  +T++K+GY A+Q+G  E   K ++KP
Sbjct: 4   IIARKVGMTRLW-KDEKVVPVTVLKAGPCVVVQKKTVEKDGYNAIQLGFEEVNEKKLTKP 62

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M G F   NV P + L EFRV+   D   VG   + + F  G  +D+TG T G+G+SGAM
Sbjct: 63  MLGVFKKANVKPMRVLKEFRVEN-VDQYSVGQEITVAIFQEGDKIDITGWTKGRGYSGAM 121

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR NF G    HG    HR  GS G   +P R+FK K+M GR G  RVT+ N EVV++D 
Sbjct: 122 KRWNFQGGPKAHGA-KFHRELGSVGQHTEPARIFKGKRMPGRYGNERVTILNSEVVTIDA 180

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
           +  L+ VKG VPGA + S +++R + K
Sbjct: 181 QNNLLAVKGGVPGA-RGSLVIIRSAVK 206


>gi|169823852|ref|YP_001691463.1| 50S ribosomal protein L3 [Finegoldia magna ATCC 29328]
 gi|303234744|ref|ZP_07321370.1| 50S ribosomal protein L3 [Finegoldia magna BVS033A4]
 gi|226725177|sp|B0RZU0|RL3_FINM2 RecName: Full=50S ribosomal protein L3
 gi|167830657|dbj|BAG07573.1| 50S ribosomal protein L3 [Finegoldia magna ATCC 29328]
 gi|302494085|gb|EFL53865.1| 50S ribosomal protein L3 [Finegoldia magna BVS033A4]
          Length = 209

 Score =  242 bits (618), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 90/208 (43%), Positives = 129/208 (62%), Gaps = 3/208 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT ++N +G  +PVTV+      V   +T +K GY A+QVG  E K K+V++P
Sbjct: 4   ILGKKIGMTQIFNEDGSVVPVTVIEAGPMVVTQIKTKEKEGYNAIQVGYIEKKEKHVNQP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           MRG F    VS KK L EF++  DD+   +G       F  G +VDV G++ GKG  GA+
Sbjct: 64  MRGHFGKAGVSFKKHLREFKI-NDDEQFNLGDEIKLDIFQDGDVVDVIGISKGKGTQGAI 122

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
            RHN+      HG S SHR  G+      P RVFK +K +G+MG +RVTV+NL++V VD+
Sbjct: 123 VRHNYSRGPMGHG-SKSHRVAGARSAGSYPARVFKGRKGSGKMGHDRVTVQNLKIVKVDN 181

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +R L+L+KG VPG  K   + VR++ KS
Sbjct: 182 ERNLLLIKGAVPG-NKGGVVTVREAIKS 208


>gi|218294754|ref|ZP_03495608.1| ribosomal protein L3 [Thermus aquaticus Y51MC23]
 gi|218244662|gb|EED11186.1| ribosomal protein L3 [Thermus aquaticus Y51MC23]
          Length = 206

 Score =  242 bits (618), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 96/211 (45%), Positives = 123/211 (58%), Gaps = 7/211 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  K+GMT +Y  + R IPVTV+    C VV  RT +K+GY AVQ+G    K   V+
Sbjct: 2   KGILGTKVGMTRIYRED-RAIPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLAQKPGRVN 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +PM+G F+   V P + L E R     D  P G V +   F  G+ VDVTG + G+G +G
Sbjct: 61  RPMKGHFAKAGVQPVRILKEIR-----DFNPEGDVVTVEIFKPGERVDVTGTSKGRGTAG 115

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKR NF G   +HG    HR  GS G R+ PGRV+K KKMAG  G  RVTV NLEVV V
Sbjct: 116 VMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGHYGAERVTVVNLEVVDV 175

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             +  L+LVKG VPG      ++VR + K A
Sbjct: 176 IPEENLLLVKGAVPGPN-GGLVVVRQTKKVA 205


>gi|310798524|gb|EFQ33417.1| 50S ribosomal protein L3 [Glomerella graminicola M1.001]
          Length = 347

 Score =  242 bits (618), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 104/217 (47%), Positives = 145/217 (66%), Gaps = 3/217 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+GV+A K GMT VY  + +R+P TVL LD  QVV ++T  KNGY AVQ+GAG  + +N
Sbjct: 90  LRTGVLAIKKGMTAVYYGK-KRVPCTVLQLDQVQVVANKTRAKNGYWAVQIGAGSKEPRN 148

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V +P+ G++ +  ++PK+ L EF+V+ ++ LLPVGS   P +F  GQ VDV   + G GF
Sbjct: 149 VERPLLGYYEAKGIAPKRHLAEFKVRSEEGLLPVGSQLFPDWFQTGQYVDVRSNSRGMGF 208

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179
           +G MKRH F G  A+HG S++HR+ G+TG  Q  G RV   KKM GRMG  RVTV+NL V
Sbjct: 209 AGGMKRHGFAGQEASHGNSLNHRTIGTTGPSQGSGSRVLPGKKMPGRMGNERVTVQNLTV 268

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           + VD++ G++LVKG V G  KN  + ++D+ K     
Sbjct: 269 LKVDNELGVVLVKGAV-GGPKNCIVQLQDAKKRKPPA 304


>gi|308272979|emb|CBX29583.1| 50S ribosomal protein L3 [uncultured Desulfobacterium sp.]
          Length = 211

 Score =  242 bits (618), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 80/210 (38%), Positives = 124/210 (59%), Gaps = 2/210 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT +++ EG+ +PVTVL +  C V   ++ + +GY A+Q+G GE K   
Sbjct: 1   MCRGLIGKKLGMTVMFSSEGKCVPVTVLKVGPCVVTQIKSNETDGYNALQIGFGEKKKTR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP++G      +   + + EF V+  ++   +G + +   F VG LVDV+G+  G+GF
Sbjct: 61  INKPVQGHLKKGGLESCEYMREFSVENPEE-YKLGQILNIEMFNVGDLVDVSGIIKGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG +KRH F G R THG    HR  GS G    P RVFK KK+ G  G  + T++NLE++
Sbjct: 120 SGVIKRHGFSGGRKTHGSHC-HRIPGSIGASAWPSRVFKGKKLPGHYGCCKQTMRNLEII 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
            V     LIL+KG VPG +     +++ + 
Sbjct: 179 DVRQHDNLILLKGAVPGPRSGMISVLKPNV 208


>gi|81429377|ref|YP_396378.1| 50S ribosomal protein L3 [Lactobacillus sakei subsp. sakei 23K]
 gi|109893434|sp|Q38UR2|RL3_LACSS RecName: Full=50S ribosomal protein L3
 gi|78611020|emb|CAI56072.1| 50S ribosomal protein L3 [Lactobacillus sakei subsp. sakei 23K]
          Length = 210

 Score =  242 bits (618), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 84/211 (39%), Positives = 118/211 (55%), Gaps = 5/211 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
             G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+QVG  + +    
Sbjct: 3   TKGILGRKVGMTQVFTENGELIPVTVIAATPNVVLQVKTNETDGYEAIQVGFEDKREVLS 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP +G  +  N +PK+ + EFR         VG+      F  G +VDVTG+T G GF 
Sbjct: 63  NKPAKGHVAKANTTPKRFIREFR-DVALGDYEVGTEIKVDTFAAGDVVDVTGVTKGHGFQ 121

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +K+         HG S  HR  GS G      RVFK K + GRMG N+ TV+NL VVS
Sbjct: 122 GNIKKDGQSRGPMGHG-SRYHRRPGSMGAV--INRVFKGKLLPGRMGNNQRTVQNLVVVS 178

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            D ++ +ILVKG VPGA KNS + ++ + K+
Sbjct: 179 TDVEKNVILVKGNVPGA-KNSMVTIKTAVKA 208


>gi|172038926|ref|YP_001805427.1| 50S ribosomal protein L3 [Cyanothece sp. ATCC 51142]
 gi|254803668|sp|B1WQQ9|RL3_CYAA5 RecName: Full=50S ribosomal protein L3
 gi|171700380|gb|ACB53361.1| 50S ribosomal protein L3 [Cyanothece sp. ATCC 51142]
          Length = 212

 Score =  242 bits (618), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 85/211 (40%), Positives = 119/211 (56%), Gaps = 4/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT ++  E G  IPVTV+    C +   +T + +GY A+Q+G  E K K
Sbjct: 1   MAVGLLGTKLGMTQIFEEESGLAIPVTVVQAGPCTITQIKTAETDGYSAIQIGYLEVKEK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++KP  G    V  SP + L E+RV  D     +G       F  G LVD+ G ++G+G
Sbjct: 61  ALTKPELGHLKKVEASPLRHLKEYRVD-DTATYTLGEAVKADIFNAGDLVDIAGTSMGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G  KRHNF     THG S +HR  GSTG    PGRV+  KKMAG+ G  + T ++L+V
Sbjct: 120 FAGYQKRHNFKRGSMTHG-SKNHRLPGSTGAGTTPGRVYPGKKMAGQYGAVKTTTRHLQV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           V VD +R L+L+KG VPG      + +  + 
Sbjct: 179 VRVDAERNLLLIKGAVPGKP-GGLLNITPAK 208


>gi|170088428|ref|XP_001875437.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164650637|gb|EDR14878.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 315

 Score =  242 bits (618), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 107/215 (49%), Positives = 136/215 (63%), Gaps = 5/215 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVV-HRTLDKNG--YMAVQVGAGEAK 57
           +R+GV+ARK GMT ++N +G R PVTVL L+NCQV    R+  +N   Y A+QV A +  
Sbjct: 47  IRTGVIARKRGMTALWNDQGVRYPVTVLQLENCQVTANIRSTRRNHTEYHAIQVAASDKP 106

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
            K  +  M G F    V PK+ + EF +  D   +PVG+  S  +F  GQ VDV   +IG
Sbjct: 107 AKGTTNQMLGHFRKAAVPPKRIVREFPITPD-AHIPVGTTLSAVHFVPGQFVDVVANSIG 165

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF G MKR  F GL A+HGVS+SHRS GSTG  QDPGR+F  KKMAG MG  R+T +NL
Sbjct: 166 KGFQGGMKRWGFHGLAASHGVSVSHRSSGSTGQHQDPGRIFPGKKMAGHMGNKRITTQNL 225

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VV VD    LI V+G VPG   N+ +L+RD+ K 
Sbjct: 226 AVVRVDTALDLIFVRGAVPGVD-NAHVLIRDAKKK 259


>gi|312144247|ref|YP_003995693.1| 50S ribosomal protein L3 [Halanaerobium sp. 'sapolanicus']
 gi|311904898|gb|ADQ15339.1| 50S ribosomal protein L3 [Halanaerobium sp. 'sapolanicus']
          Length = 206

 Score =  242 bits (618), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 91/210 (43%), Positives = 126/210 (60%), Gaps = 5/210 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ +KLGMT  +   G  +PVTV+    C V   +T +K+GY AVQ+G GE K   
Sbjct: 1   MAKAILGKKLGMTQYFKDNGDVVPVTVVEAGPCVVTQIKTTEKDGYDAVQLGFGEVKKHR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP  G F S N+ PKK L EF+    D  L  GS  +   F VG +V+V+G++ GKGF
Sbjct: 61  LNKPKLGQFESRNLEPKKYLREFKGLDLD--LSEGSEVAADIFEVGDIVNVSGVSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR N      +HG    HR+ GS G   D  RVFK KKM GRMG NRVT +NLE+V
Sbjct: 119 QGNIKRWNHHSGPMSHGSH-FHRAPGSIGSV-DARRVFKGKKMPGRMGHNRVTEENLEIV 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
            VD +R ++L+ G VPG+KK + + ++ + 
Sbjct: 177 KVDLERNVLLIAGSVPGSKK-TILEIKSAK 205


>gi|260435636|ref|ZP_05789606.1| 50S ribosomal protein L3 [Synechococcus sp. WH 8109]
 gi|260413510|gb|EEX06806.1| 50S ribosomal protein L3 [Synechococcus sp. WH 8109]
          Length = 229

 Score =  242 bits (618), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 82/219 (37%), Positives = 128/219 (58%), Gaps = 4/219 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++ +GR +PVT++    C++   +  D +GY AVQ+G GE + K 
Sbjct: 12  MSIGILGKKLGMSQFFDEQGRAVPVTLIEAGPCRITQLKNDDTDGYSAVQIGFGETREKL 71

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G  +       + L E+RV    + L +G   +   F  GQ VDV+G T+G+GF
Sbjct: 72  INKPAQGHLNKSGEGLLRHLREYRVDS-VEGLEIGGAITVGDFEAGQKVDVSGDTVGRGF 130

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     THG S +HR  GSTG    PGR++  K+MAGR GG ++T + L ++
Sbjct: 131 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLTIL 189

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK-SAVNCKG 218
            VD +  L++VKG VPG    + + +R + +  A   KG
Sbjct: 190 KVDSEHNLLVVKGSVPGKP-GALLNIRPALRVGAKPAKG 227


>gi|222099967|ref|YP_002534535.1| 50S ribosomal protein L3 [Thermotoga neapolitana DSM 4359]
 gi|221572357|gb|ACM23169.1| 50S ribosomal protein L3 [Thermotoga neapolitana DSM 4359]
          Length = 210

 Score =  242 bits (618), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 93/206 (45%), Positives = 125/206 (60%), Gaps = 6/206 (2%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RK+GMT V+ I    +PVTV+    C VV  +T++ +GY AVQ+G  +AK   V+KP
Sbjct: 7   IIGRKIGMTRVF-IGNEAVPVTVIKAGPCVVVQKKTVETDGYNAVQLGFEKAK--KVNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + G F    V P + L EFRV   D+  P G V     F  G+ VDVTG + G+GF+GAM
Sbjct: 64  LAGHFKKFGVEPMRVLREFRVDNPDEYEP-GQVIKVDIFEKGEYVDVTGWSKGRGFAGAM 122

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR  F G   +HG S  HR  GS G   +P +++K KKM GR G  RVTV+NL+VV VD 
Sbjct: 123 KRWGFSGGPKSHG-SKFHRELGSVGQHTEPAKIWKGKKMPGRYGNERVTVRNLQVVDVDP 181

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSF 210
           +  LI VKG VPGA +   +L+R + 
Sbjct: 182 ENDLIAVKGGVPGA-RGGLVLIRSAK 206


>gi|150025407|ref|YP_001296233.1| 50S ribosomal protein L3 [Flavobacterium psychrophilum JIP02/86]
 gi|166233142|sp|A6GZ99|RL3_FLAPJ RecName: Full=50S ribosomal protein L3
 gi|149771948|emb|CAL43422.1| 50S ribosomal protein L3 [Flavobacterium psychrophilum JIP02/86]
          Length = 205

 Score =  242 bits (618), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 83/206 (40%), Positives = 124/206 (60%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ RK+GMT +++  G+ IP TV+    C V   RT+  +GY A+Q+G  +   K+ +
Sbjct: 2   SGLIGRKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTIGVDGYEALQLGFDDKNEKHST 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F       KKK+ EF+         +G V S   F+ G+ VD+ G++ GKGF G
Sbjct: 62  KADLGHFKKAGTVAKKKVVEFQ--DFVSEHKLGDVISVDLFSEGEFVDIQGVSKGKGFQG 119

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG  +ATHG     R+ GS G    P RVFK  +MAGRMGG+ V V+NL V+ 
Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGGDNVKVQNLRVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L+++KGC+PG   NS+++++
Sbjct: 180 VVAEKNLLVIKGCIPGCN-NSYVIIQ 204


>gi|182680994|ref|YP_001829154.1| 50S ribosomal protein L3 [Xylella fastidiosa M23]
 gi|182631104|gb|ACB91880.1| ribosomal protein L3 [Xylella fastidiosa M23]
 gi|307579463|gb|ADN63432.1| 50S ribosomal protein L3 [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 210

 Score =  241 bits (617), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 98/210 (46%), Positives = 129/210 (61%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G V RK GM+ V+  +G  IPVT++     +VV  +T D +GY AVQV  G  +   V+
Sbjct: 1   MGFVGRKAGMSRVFLEDGCSIPVTLIEATANRVVQIKTSDVDGYDAVQVTVGSRRSVLVN 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           KP  G F+   V   + L+EFRV+K       VGS    S F VGQ VD+ G+T GKGF 
Sbjct: 61  KPESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGFQ 120

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNF    ATHG S+SHR+ GS G RQ PGRVF  KKM+G MG  + +V+NLEV+ 
Sbjct: 121 GTIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVKQSVQNLEVIK 180

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +D +R LI V+G +PGA     +L+R + K
Sbjct: 181 IDVERCLIAVRGAIPGASGGD-VLIRSASK 209


>gi|285017320|ref|YP_003375031.1| 50s ribosomal protein l3 [Xanthomonas albilineans GPE PC73]
 gi|283472538|emb|CBA15043.1| probable 50s ribosomal protein l3 [Xanthomonas albilineans]
          Length = 216

 Score =  241 bits (617), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 128/210 (60%), Gaps = 2/210 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G V RK GM+ V+  +GR IPVT++     ++   +T++ +GY AVQ+  G  +V  V+K
Sbjct: 8   GFVGRKAGMSRVFTEDGRSIPVTLIEATPNRITQLKTVENDGYSAVQITVGTRRVALVNK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P  G F+   V   + L+EFRV+        +G       F VGQ VDV G+T GKGF G
Sbjct: 68  PAAGHFAKAKVEAGRGLWEFRVEDAQLGDFAIGGEIKVDIFAVGQKVDVQGVTKGKGFQG 127

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHNF    ATHG S+SHR  GS G RQ PGRVF  KKM+G MG  + + +NLEVV V
Sbjct: 128 TIKRHNFRMGDATHGNSLSHRVGGSLGQRQTPGRVFLGKKMSGHMGAVQQSTQNLEVVKV 187

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +RGLI ++G VPGA     ++VR + K+
Sbjct: 188 DVERGLIAIRGAVPGAAGGD-VIVRPASKA 216


>gi|67923583|ref|ZP_00517055.1| Ribosomal protein L3 [Crocosphaera watsonii WH 8501]
 gi|67854553|gb|EAM49840.1| Ribosomal protein L3 [Crocosphaera watsonii WH 8501]
          Length = 213

 Score =  241 bits (617), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 88/210 (41%), Positives = 121/210 (57%), Gaps = 4/210 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT ++  E G  IPVTV+    C +   +T + +GY AVQ+G  E K K
Sbjct: 1   MSVGLLGTKLGMTQIFEEESGLAIPVTVVQAGPCTITQIKTTETDGYSAVQLGYLEVKEK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++KP  G    VN SP + L E+RV +D     +G       F+ G LVDV+G ++G+G
Sbjct: 61  ALTKPELGHLKKVNASPLRHLKEYRV-EDTASYQLGEAVKADIFSTGDLVDVSGTSMGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G  KRHNF     THG S +HR  GSTG    PGRV+  KKMAG+ G  + T + L V
Sbjct: 120 FAGYQKRHNFKRGNMTHG-SKNHRLPGSTGAGTTPGRVYPGKKMAGQYGAAKTTTRKLTV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           V VD +R L+L+KG VPG      + +  +
Sbjct: 179 VRVDTERNLLLIKGAVPGKP-GGLLNITPA 207


>gi|218779762|ref|YP_002431080.1| 50S ribosomal protein L3 [Desulfatibacillum alkenivorans AK-01]
 gi|226725162|sp|B8FET5|RL3_DESAA RecName: Full=50S ribosomal protein L3
 gi|218761146|gb|ACL03612.1| ribosomal protein L3 [Desulfatibacillum alkenivorans AK-01]
          Length = 211

 Score =  241 bits (617), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 85/203 (41%), Positives = 118/203 (58%), Gaps = 2/203 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGMT +++ +GR IPVTV+    C V   +T DK+GY A+Q+G G  K ++
Sbjct: 1   MSKGILGKKLGMTGLFSSDGRHIPVTVIEAGPCVVTQIKTKDKDGYNALQLGFGPKKERH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP  G F     +    + EF V   ++   +G   S   F VG+ +DV G++ G+GF
Sbjct: 61  TNKPETGHFEKSGGAAYVMVKEFAVDNPEE-FELGQSLSTELFAVGEKIDVAGVSKGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRH FGG R THG     R  GS GC   P +V K KK+ G  G  R TV+NLE+V
Sbjct: 120 AGVMKRHGFGGGRMTHGGRCK-RRPGSIGCSAWPSKVIKGKKLPGHYGVERKTVRNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSW 203
            +   + LIL+KG VPGAK    
Sbjct: 179 DIRADQNLILLKGAVPGAKSGML 201


>gi|189347703|ref|YP_001944232.1| 50S ribosomal protein L3 [Chlorobium limicola DSM 245]
 gi|226725145|sp|B3EGZ0|RL3_CHLL2 RecName: Full=50S ribosomal protein L3
 gi|189341850|gb|ACD91253.1| ribosomal protein L3 [Chlorobium limicola DSM 245]
          Length = 209

 Score =  241 bits (617), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 84/207 (40%), Positives = 126/207 (60%), Gaps = 1/207 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT +YN +   I  TV+    C V   ++ +K+GY A Q+G GE   K ++KP
Sbjct: 4   ILGKKIGMTRLYNDKREAISCTVIQAGPCFVTQVKSAEKDGYDAYQIGIGERDEKKINKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M+G +    V+P   + EF+  +  + L  G+  S   F  G+ V+V G++ GKGF+G +
Sbjct: 64  MQGHYRKAGVTPGFMMAEFKKTEFSENLEAGNPVSVESFKEGEKVNVLGVSKGKGFAGVV 123

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHNFGG   THG S   R+ GS G   DP R F+  +MAGRMGG+ +TVKNLE+V +  
Sbjct: 124 KRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFRGTRMAGRMGGDNITVKNLEIVKIMP 183

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
           +  L+++KG VPG  KNS++ +    K
Sbjct: 184 ESNLLVIKGAVPGP-KNSYVKIVSIKK 209


>gi|226356897|ref|YP_002786637.1| 50S ribosomal protein L3 [Deinococcus deserti VCD115]
 gi|226318887|gb|ACO46883.1| putative 50S ribosomal protein L3 [Deinococcus deserti VCD115]
          Length = 206

 Score =  241 bits (617), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 91/211 (43%), Positives = 121/211 (57%), Gaps = 7/211 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  K+GMT ++  + R +PVTV+    C VV  +T   +GY AVQ+G      K V+
Sbjct: 2   KGILGTKVGMTQIWKGD-RAVPVTVVLAGPCPVVQRKTSVSDGYEAVQIGFAPKSEKRVN 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +P  G F    VSP + L EFR     +  P G   S   F  G+ +D TG + GKGF G
Sbjct: 61  RPAAGHFKKYGVSPVRFLREFR-----NFNPDGDTVSVDIFAEGEKIDATGTSKGKGFQG 115

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKR NF G  A+HG    HR  GS G R+ PGRV+K K+MAG MG +R+TV+NLEVV V
Sbjct: 116 VMKRWNFKGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGHMGMDRITVQNLEVVEV 175

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
                LILVKG +PGA     +++R + K  
Sbjct: 176 RADENLILVKGAIPGAN-GGLVVLRQAAKGG 205


>gi|300174031|ref|YP_003773197.1| 50S ribosomal protein L3 [Leuconostoc gasicomitatum LMG 18811]
 gi|299888410|emb|CBL92378.1| 50S ribosomal protein L3 [Leuconostoc gasicomitatum LMG 18811]
          Length = 227

 Score =  241 bits (617), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 78/219 (35%), Positives = 117/219 (53%), Gaps = 8/219 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  I VTV+      V+  +  + +GY A+Q+G  + +   
Sbjct: 1   MTKGILGRKVGMTQVFTEIGELIAVTVVEATPNVVLQVKNAETDGYSALQLGYQDKRTVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  S  N +PK+ + E  ++  +     G       F  G+ VDVTG+T G GF
Sbjct: 61  SNKPEQGHASKANTTPKRYVRE--IRNAEGEFNAGDEIKVDTFEAGEYVDVTGITKGHGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +K+        +HG S  HR  GS G      RVFK K + GRMG ++ T++N+ +V
Sbjct: 119 QGNIKKDGQSRGPMSHG-SRFHRRPGSMGAV--INRVFKGKLLPGRMGNHKRTMQNVAIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            VD +  L+L+KG VPGA K S + V+ + K  VN K  
Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTVKSTVK--VNAKHP 211


>gi|78211928|ref|YP_380707.1| 50S ribosomal protein L3 [Synechococcus sp. CC9605]
 gi|109893567|sp|Q3AMN0|RL3_SYNSC RecName: Full=50S ribosomal protein L3
 gi|78196387|gb|ABB34152.1| 50S ribosomal protein L3 [Synechococcus sp. CC9605]
          Length = 218

 Score =  241 bits (617), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 79/216 (36%), Positives = 125/216 (57%), Gaps = 3/216 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++ +GR +PVT++    C++   +  D +GY AVQ+G GE + K 
Sbjct: 1   MSIGILGKKLGMSQFFDEQGRAVPVTLIEAGPCRITQLKNDDTDGYSAVQIGFGETREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G  +       + L E+RV    + L +G   +   F  GQ VDV+G T+G+GF
Sbjct: 61  INKPAQGHLNKSGEGLLRHLREYRVDS-VEGLELGGAITVGDFEAGQKVDVSGDTVGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     THG S +HR  GSTG    PGR++  K+MAGR GG ++T + L ++
Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLTIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            VD +  L++VKG VPG    + + +R + +     
Sbjct: 179 KVDSEHNLLVVKGSVPGKP-GALLNIRPALRVGAKP 213


>gi|238061121|ref|ZP_04605830.1| 50S ribosomal protein L3 rplC [Micromonospora sp. ATCC 39149]
 gi|57547707|gb|AAW52546.1| RplC [Micromonospora sp. ATCC 39149]
 gi|237882932|gb|EEP71760.1| 50S ribosomal protein L3 rplC [Micromonospora sp. ATCC 39149]
          Length = 223

 Score =  241 bits (617), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 90/206 (43%), Positives = 126/206 (61%), Gaps = 3/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   + +PVTV+    C V   R+ +K+GY AVQ+  G    + V 
Sbjct: 6   KGILGAKLGMTQVWD-NNKVVPVTVVQAGPCVVSQVRSAEKDGYSAVQLAYGTIDPRKVK 64

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G ++  +V+P++ + E R     D   +G   +   F  G  +DVTG T GKG++G
Sbjct: 65  KPVSGHYAKADVAPRRHIVELRTTDAAD-YSLGQEVTVEQFPAGVTIDVTGKTKGKGYAG 123

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F GLRA+HGV   HRS GS G    PGRVFK  +MAGRMGG R TV+NL V ++
Sbjct: 124 PMKRHGFHGLRASHGVERKHRSPGSIGACATPGRVFKGTRMAGRMGGVRYTVQNLTVQAI 183

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRD 208
           D +  L+LV+G +PG  K + +LVR 
Sbjct: 184 DTENNLLLVRGAIPGP-KGALVLVRT 208


>gi|281358743|ref|ZP_06245219.1| 50S ribosomal protein L3 [Victivallis vadensis ATCC BAA-548]
 gi|281314770|gb|EFA98807.1| 50S ribosomal protein L3 [Victivallis vadensis ATCC BAA-548]
          Length = 218

 Score =  241 bits (617), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 87/218 (39%), Positives = 123/218 (56%), Gaps = 5/218 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT VY+ +G  IPVTV+    C V   +T++++GY AVQ+G GE K KNV+
Sbjct: 2   KGLIGRKVGMTQVYDEKGVLIPVTVVQAGPCVVTDVKTVERDGYSAVQLGFGERKAKNVT 61

Query: 63  KPMRGFFSSVNVS---PKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           K   G  +   V+       L E R    D+    G+V +   F     +DV G T G+G
Sbjct: 62  KARAGHLAKAGVTGDKLPSVLREIRTAAGDEAPAPGTVLNADVFEANDYLDVVGTTKGRG 121

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G ++R+ FGG RA+HG  +  R  GS GC + PG V K K+M G MG    TV+NL+V
Sbjct: 122 FQGVVRRYRFGGGRASHGG-VWTRRTGSIGCCEWPGNVIKGKRMPGHMGNVPRTVQNLQV 180

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           V V  +  ++LVKG +PGA     +L+R + K     K
Sbjct: 181 VRVMAEDNVLLVKGAIPGAN-GGILLIRSAIKKQTGAK 217


>gi|145596434|ref|YP_001160731.1| ribosomal protein L3 [Salinispora tropica CNB-440]
 gi|212288412|sp|A4XBP6|RL3_SALTO RecName: Full=50S ribosomal protein L3
 gi|145305771|gb|ABP56353.1| LSU ribosomal protein L3P [Salinispora tropica CNB-440]
          Length = 219

 Score =  241 bits (617), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 93/206 (45%), Positives = 125/206 (60%), Gaps = 3/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   R +PVTV+    C V   R+ +K+GY AVQ+  G    + V 
Sbjct: 6   KGILGAKLGMTQVWD-NNRVVPVTVVQAGPCVVSQVRSQEKDGYAAVQLAYGAIDPRKVK 64

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G ++  +V+P++ + E R   D      G   +   F  G  VDVTG T GKG++G
Sbjct: 65  KPISGHYAKADVAPRRHIVELRTT-DAGEYSSGQEVTVEEFPAGISVDVTGKTKGKGYAG 123

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F GLRA+HGV   HRS GS G    PGRVFK  +MAGRMGG R TV+NL V +V
Sbjct: 124 PMKRHGFHGLRASHGVERKHRSPGSIGGCATPGRVFKGTRMAGRMGGVRYTVQNLTVQAV 183

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRD 208
           D +  L+LV+G +PG  K + +LVR 
Sbjct: 184 DTENNLLLVRGAIPGP-KGALVLVRT 208


>gi|119358191|ref|YP_912835.1| 50S ribosomal protein L3 [Chlorobium phaeobacteroides DSM 266]
 gi|166233130|sp|A1BJ34|RL3_CHLPD RecName: Full=50S ribosomal protein L3
 gi|119355540|gb|ABL66411.1| LSU ribosomal protein L3P [Chlorobium phaeobacteroides DSM 266]
          Length = 209

 Score =  241 bits (617), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 83/207 (40%), Positives = 124/207 (59%), Gaps = 1/207 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT +YN +   I  T++    C V   +  +K+GY A Q+G GE   K V+KP
Sbjct: 4   ILGKKIGMTRLYNDKREAISCTIIQAGPCFVTQVKHAEKDGYDAYQIGIGERDEKKVNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M G +    V+P  K+ EF   + +  L  G+    S F  G+ ++V G++ GKGF+G +
Sbjct: 64  MLGHYKKAGVTPGYKIAEFSKSEINLELEAGAPLDLSVFKEGEKINVLGVSKGKGFAGVV 123

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHNFGG   THG S   R+ GS G   DP R F+  +MAGRMGG  +TVKNLE++ +  
Sbjct: 124 KRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFRGTRMAGRMGGCNITVKNLEIIRIMP 183

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
           +  L++VKG +PG  KNS++ +  + K
Sbjct: 184 ESNLLVVKGAIPGP-KNSYVKIVSTKK 209


>gi|313887083|ref|ZP_07820782.1| 50S ribosomal protein L3 [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312923494|gb|EFR34304.1| 50S ribosomal protein L3 [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|332176633|gb|AEE12323.1| 50S ribosomal protein L3 [Porphyromonas asaccharolytica DSM 20707]
          Length = 205

 Score =  241 bits (616), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 82/204 (40%), Positives = 124/204 (60%), Gaps = 4/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EG  +P TV+ +  C V   +T D++GY A+Q+G  +AK K+ ++
Sbjct: 3   GLLGKKIGMTSVFSAEGVNVPCTVIEVGPCVVTQVKTADRDGYEAIQLGFQDAKDKHTTR 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F +  V+ K+ L EF     D    +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLQGHFKAAGVTNKRHLAEFMGFGSD--YKLGDEITVELFNDTHYVDVHGTSKGKGFQGV 120

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  ++THG     R+ GS G    P +VFK  +MAG++G  RVTV+NLEV+ V
Sbjct: 121 VKRHGFGGVGQSTHGQDDRLRAPGSVGACSYPAKVFKGTRMAGQLGNKRVTVQNLEVIKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
             +  ++++KG VPGA K S I +
Sbjct: 181 MPEHNILVLKGSVPGA-KGSIIAI 203


>gi|78357300|ref|YP_388749.1| 50S ribosomal protein L3 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|109893427|sp|Q30Z42|RL3_DESDG RecName: Full=50S ribosomal protein L3
 gi|78219705|gb|ABB39054.1| LSU ribosomal protein L3P [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 209

 Score =  241 bits (616), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 93/206 (45%), Positives = 128/206 (62%), Gaps = 2/206 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           + G++ RK+GMT ++  +G  + VTV+    C V+  +   K+GY AVQ+G  EAK K+V
Sbjct: 4   KMGILGRKIGMTRIFANDGSAVAVTVIQAGPCPVIQVKDAAKDGYNAVQIGFEEAKEKHV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP RG          + L E R++   +   VG   +   FT G+ V VTG +IGKGF+
Sbjct: 64  NKPARGHMDKAGRGLFRVLREIRLEAPAE-QKVGDDLTVGLFTPGEFVKVTGTSIGKGFA 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR NFGG+ A+HG    HRS GS G    PG+V+KNKKMAG MG  +VTVK+L+++ 
Sbjct: 123 GVMKRWNFGGMPASHGHEAVHRSPGSIGHATFPGKVWKNKKMAGHMGARQVTVKSLQIIE 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  +  LILVKG VPG  KN  ++VR
Sbjct: 183 VRAEDNLILVKGPVPGP-KNGLVMVR 207


>gi|304438907|ref|ZP_07398830.1| 50S ribosomal protein L3 [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304372573|gb|EFM26156.1| 50S ribosomal protein L3 [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 210

 Score =  241 bits (616), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 88/207 (42%), Positives = 126/207 (60%), Gaps = 3/207 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT +++  G   PVTV+      VV  ++++ +GY AVQV +G+ K+  V+KP
Sbjct: 4   LIGKKVGMTQLFDENGTVTPVTVIQAMPNVVVQKKSVETDGYNAVQVASGDVKLNRVNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
            +G F   NV PKK L EF+   D D   +G   + + F+ G  VDV G + GKG  G +
Sbjct: 64  TKGHFEKANVEPKKYLNEFKTD-DLDSYEIGKELNVTIFSEGDFVDVVGTSKGKGTQGVV 122

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
            RH FG  R THG S  HR  G  G    PG+V+KN +MAG+ G  RVTV+NL VV VD+
Sbjct: 123 TRHGFGRGRETHG-SKFHRMPGGMGAATYPGKVWKNHRMAGKTGNERVTVQNLLVVRVDE 181

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
           +R LI VKG +PG K+   + V+++ K
Sbjct: 182 ERNLIFVKGSIPGPKRGK-VTVKETVK 207


>gi|225850735|ref|YP_002730969.1| 50S ribosomal protein L3 [Persephonella marina EX-H1]
 gi|254803685|sp|C0QQM3|RL3_PERMH RecName: Full=50S ribosomal protein L3
 gi|225645055|gb|ACO03241.1| 50S ribosomal protein L3 [Persephonella marina EX-H1]
          Length = 227

 Score =  241 bits (616), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 92/210 (43%), Positives = 129/210 (61%), Gaps = 3/210 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+  +G+ IPVTV+ ++   VV  RT DK+GY AV +G GE K K 
Sbjct: 1   MPKGIIGKKIGMTRVF-KDGKAIPVTVIQVEPNYVVNIRTEDKDGYSAVVLGTGEKKEKR 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
             KPM   F    + P + L EF +++ +   P   V     F  G LVDVTG + G+GF
Sbjct: 60  TPKPMLAIFKKAGLKPLRHLAEFPLKEGEQPEPGQEVKVEDVFEKGDLVDVTGTSKGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           + AMKR +F G + +HG S  HR+ GS G   DPGRV+K K+MAG  G   +TV+ LEVV
Sbjct: 120 ASAMKRWDFSGFKKSHG-SRYHRAVGSIGACSDPGRVWKTKRMAGHYGNETITVQGLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
            +  ++ +ILVKG VPGA K S + +++S 
Sbjct: 179 DIIPEKNIILVKGSVPGAPK-SVVKLKESV 207


>gi|297618384|ref|YP_003703543.1| 50S ribosomal protein L3 [Syntrophothermus lipocalidus DSM 12680]
 gi|297146221|gb|ADI02978.1| 50S ribosomal protein L3 [Syntrophothermus lipocalidus DSM 12680]
          Length = 212

 Score =  241 bits (616), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 82/210 (39%), Positives = 128/210 (60%), Gaps = 4/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT +++   R   VTV+    C V+  +T+  +GY A+QVG G  K   ++
Sbjct: 7   KGLLGVKLGMTQLFDENDRATAVTVVEAGPCIVLQKKTVATDGYNAIQVGFGSVKESKIT 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G  ++ NV P + + EFRV+  DD   VG       F  G ++DVTG++ GKGF+G
Sbjct: 67  KPLKGHLANANVKPVRFIREFRVENIDD-YQVGQEIRVDIFKEGDIIDVTGISKGKGFAG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHNF      HG S  HR  G+ G +  P RVFK +K+ GR+GG +VTV+ L VV V
Sbjct: 126 GIKRHNFQRGAMAHG-SKYHRRPGALGAKG-PARVFKGRKLPGRLGGEKVTVQRLRVVKV 183

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
             ++ ++L+KG +PG ++   + +++S K+
Sbjct: 184 YPEKNILLIKGAIPGPRRG-LVTIKNSAKA 212


>gi|86610028|ref|YP_478790.1| 50S ribosomal protein L3 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|109893564|sp|Q2JIM7|RL3_SYNJB RecName: Full=50S ribosomal protein L3
 gi|86558570|gb|ABD03527.1| ribosomal protein L3 [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 214

 Score =  241 bits (616), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 84/211 (39%), Positives = 124/211 (58%), Gaps = 4/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT +++ EG  IPVTV+    C V   +T   +GY A+Q+G      K+
Sbjct: 1   MALGILGRKVGMTQIFSPEGLAIPVTVVQAGPCTVTQIKTQATDGYNAIQLGYLPTAEKH 60

Query: 61  VSKPMRGFFSSVNV-SPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +++  RG  +   V    + L EFRV    +   +G   +   F+ GQLVDV G +IG+G
Sbjct: 61  LTRAQRGHLTKAGVTELLRHLREFRVD-QPEAYQLGQKITVEMFSPGQLVDVAGTSIGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G  KRH+FG    +HG S +HR  GS G    PGRVF   +MAGR+GG RVT + L++
Sbjct: 120 FAGYQKRHHFGRGPMSHG-SKNHRRPGSIGAGTTPGRVFPGMRMAGRLGGGRVTTRKLQL 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           V VD +R L+++KGCVPG +    + +  + 
Sbjct: 179 VQVDPERDLLVIKGCVPGVE-GGLLEITPAK 208


>gi|313204917|ref|YP_004043574.1| LSU ribosomal protein l3p [Paludibacter propionicigenes WB4]
 gi|312444233|gb|ADQ80589.1| LSU ribosomal protein L3P [Paludibacter propionicigenes WB4]
          Length = 205

 Score =  241 bits (616), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 82/204 (40%), Positives = 123/204 (60%), Gaps = 4/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++ +GY AVQVG      K+ +K
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKTVETDGYEAVQVGFQTKTEKHTNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
              G F +  V+P++ L EF+  + +    +G   +   F     VDV G + GKGF G 
Sbjct: 63  AEAGIFKAAGVAPQRHLVEFKGFETE--FKLGDAITVELFEADTFVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  +ATHG     R+ GS G    P RVFK  +MAGR GG++VT++NL+V+ V
Sbjct: 121 VKRHGFGGVGQATHGQHNRLRAPGSLGASSYPSRVFKGMRMAGRTGGDKVTMQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
             +  LIL+KG VPGA K S +++
Sbjct: 181 IPEHNLILIKGSVPGA-KGSIVII 203


>gi|310821093|ref|YP_003953451.1| 50S ribosomal protein L3 [Stigmatella aurantiaca DW4/3-1]
 gi|309394165|gb|ADO71624.1| 50S ribosomal protein L3 [Stigmatella aurantiaca DW4/3-1]
          Length = 223

 Score =  241 bits (616), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 98/221 (44%), Positives = 136/221 (61%), Gaps = 3/221 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GMT V+N EG  +PVTV+ +  CQVV  RT +K+ Y AV +G GE + K ++
Sbjct: 2   KGLIGKKIGMTQVFNDEGNLVPVTVVDVSTCQVVGKRTPEKDQYSAVTLGFGEIREKVLN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +  RGFF   + + ++ L EFRV  +D     VG       FT GQLVDVTG T G+GFS
Sbjct: 62  QAQRGFFKKNSAALRRHLKEFRVTPEDAAQFNVGDAVKADLFTKGQLVDVTGTTKGRGFS 121

Query: 122 GAMKRHNFGGLR-ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           G M+R +F G +  THG     R  G+ G R+ PGR + NKKM G  G  +VT +NL VV
Sbjct: 122 GVMRRWSFKGSQTKTHGTHEYQRHPGAIGQRKTPGRTYPNKKMPGHYGVEQVTTQNLTVV 181

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
            VD ++GL+L+KG VPG   ++ + VR S K A+  + K S
Sbjct: 182 DVDTEKGLLLIKGAVPG-HNDAIVYVRPSVKVALRAQHKAS 221


>gi|228470688|ref|ZP_04055539.1| 50S ribosomal protein L3 [Porphyromonas uenonis 60-3]
 gi|228307545|gb|EEK16541.1| 50S ribosomal protein L3 [Porphyromonas uenonis 60-3]
          Length = 205

 Score =  241 bits (616), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 82/204 (40%), Positives = 124/204 (60%), Gaps = 4/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EG  +P TV+ +  C V   +T D++GY A+Q+G  +AK K+ ++
Sbjct: 3   GLLGKKIGMTSVFSAEGVNVPCTVIEVGPCVVTQVKTADRDGYEAIQLGFQDAKDKHTTR 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F +  V+ K+ L EF     D    +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLQGHFKAAGVTNKRHLAEFMGFGSD--YKLGDEITVELFNDTHYVDVHGTSKGKGFQGV 120

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  ++THG     R+ G+ G    P +VFK  +MAG+MG  RVTV+NLEV+ V
Sbjct: 121 VKRHGFGGVGQSTHGQDDRLRAPGAVGACSYPAKVFKGTRMAGQMGNKRVTVQNLEVIKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
             +  ++++KG VPGA K S I +
Sbjct: 181 MPEHNILVLKGSVPGA-KGSIIAI 203


>gi|108757306|ref|YP_631567.1| 50S ribosomal protein L3 [Myxococcus xanthus DK 1622]
 gi|123374502|sp|Q1D706|RL3_MYXXD RecName: Full=50S ribosomal protein L3
 gi|108461186|gb|ABF86371.1| ribosomal protein L3 [Myxococcus xanthus DK 1622]
          Length = 224

 Score =  241 bits (616), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 97/221 (43%), Positives = 135/221 (61%), Gaps = 3/221 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GMT V+N EG  +PVTV+ +  CQVV  RT +K+ Y AV +G GE + K ++
Sbjct: 2   KGLIGKKIGMTQVFNDEGNLVPVTVIDVGTCQVVGKRTPEKDNYSAVTIGFGEIREKILN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
              RGFF   N   ++ L EFRV  ++     VG       F  G+LVDVTG+T G+GFS
Sbjct: 62  LAERGFFKKANAPYRRHLKEFRVTPEEAASFNVGDAVKADMFAKGELVDVTGITKGRGFS 121

Query: 122 GAMKRHNFGGLR-ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           G M+R NF G +  THG     R  G+ G R+ PGRV+ NKKM G  G ++VT +NL VV
Sbjct: 122 GVMRRWNFKGSQTKTHGTHEYQRHPGAIGQRKTPGRVYPNKKMPGHYGVDQVTTQNLTVV 181

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
            VD ++GL+LVKG V G   N  + +R S K+A+  + K +
Sbjct: 182 DVDVEKGLVLVKGAVAG-HNNGVVYIRPSIKAAMRAQHKAA 221


>gi|317485822|ref|ZP_07944686.1| 50S ribosomal protein L3 [Bilophila wadsworthia 3_1_6]
 gi|316922928|gb|EFV44150.1| 50S ribosomal protein L3 [Bilophila wadsworthia 3_1_6]
          Length = 209

 Score =  241 bits (615), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 85/206 (41%), Positives = 123/206 (59%), Gaps = 2/206 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           + G++ RKLGMT ++  +G  + VTV+    C V   +T + +GY A+Q+   EAK K+V
Sbjct: 4   KMGILGRKLGMTRIFAGDGSAVAVTVVQAGPCPVTQVKTAETDGYNALQIAFEEAKEKHV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KPM+G F+    +  +K+ E R+        VG+V +   F  G  + VTG ++GKG+ 
Sbjct: 64  TKPMKGHFAKAGTALYRKVREIRLDGPAA-YEVGAVLTADVFAAGDKIKVTGTSLGKGYQ 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G M+R NF G + THG    HRS GS G    PG VFK +KMAG  G  +VTV+ LE+V 
Sbjct: 123 GVMRRWNFKGSKDTHGCEKVHRSGGSIGNNTFPGHVFKGRKMAGHWGAEQVTVQGLEIVD 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  +  +IL++G VPG  KN  +LVR
Sbjct: 183 VRTEDNVILIRGSVPGP-KNGLVLVR 207


>gi|302379782|ref|ZP_07268266.1| 50S ribosomal protein L3 [Finegoldia magna ACS-171-V-Col3]
 gi|302312370|gb|EFK94367.1| 50S ribosomal protein L3 [Finegoldia magna ACS-171-V-Col3]
          Length = 209

 Score =  241 bits (615), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 90/208 (43%), Positives = 128/208 (61%), Gaps = 3/208 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT ++N +G  +PVTV+      V   +T +K GY A+QVG  E K K+V++P
Sbjct: 4   ILGKKIGMTQIFNEDGSVVPVTVIEAGPMVVTQIKTKEKEGYNAIQVGYIEKKEKHVNQP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           MRG F    VS KK L EF++  DD+   +G       F  G +VDV G++ GKG  GA+
Sbjct: 64  MRGHFGKAGVSFKKHLREFKI-NDDEQFNLGDEIKLDIFQDGDVVDVIGISKGKGTQGAI 122

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
            RHN+      HG S SHR  G+      P RVFK +K  G+MG +RVTV+NL++V VD+
Sbjct: 123 VRHNYSRGPMGHG-SKSHRVAGARSAGSYPARVFKGRKGFGKMGHDRVTVQNLKIVKVDN 181

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +R L+L+KG VPG  K   + VR++ KS
Sbjct: 182 ERNLLLIKGAVPG-NKGGVVTVREAIKS 208


>gi|167752385|ref|ZP_02424512.1| hypothetical protein ALIPUT_00629 [Alistipes putredinis DSM 17216]
 gi|167660626|gb|EDS04756.1| hypothetical protein ALIPUT_00629 [Alistipes putredinis DSM 17216]
          Length = 204

 Score =  241 bits (615), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 83/205 (40%), Positives = 120/205 (58%), Gaps = 5/205 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT VY+ EG+ IP TV+    C V   RT++K+ Y AVQ+   +   K+ +
Sbjct: 2   SGLIGKKIGMTSVYSAEGKNIPCTVIEAGPCVVTQIRTVEKDSYEAVQIAYDDKSEKHTT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
             + G F     +PK+K+ EF   KD   + +G   +   F+    VDVTG++ GKGF G
Sbjct: 62  GSLLGHFKKAGTTPKRKMAEF---KDMPEVNLGDTLTVDMFSEEDWVDVTGISKGKGFQG 118

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG    THG     R  GS G    P RVF  K++ GRMGG +V V NL+V+ 
Sbjct: 119 VVKRHGFGGVGGQTHGQHNRQRKPGSLGASSYPSRVFPGKRLPGRMGGEQVKVLNLKVLK 178

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           +  +  LILVKG +PGA K +++ +
Sbjct: 179 IIPENNLILVKGSIPGA-KGAYLTI 202


>gi|148268690|ref|YP_001247633.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus JH9]
 gi|189029484|sp|A5IV34|RL3_STAA9 RecName: Full=50S ribosomal protein L3
 gi|147741759|gb|ABQ50057.1| LSU ribosomal protein L3P [Staphylococcus aureus subsp. aureus JH9]
          Length = 220

 Score =  241 bits (615), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 93/221 (42%), Positives = 122/221 (55%), Gaps = 11/221 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY A+QVG        
Sbjct: 1   MTKGILGRKIGMTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYK 60

Query: 54  -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
                 K  +KP  G     + +PK+ + EFR   D D   VG   S   F  G ++DVT
Sbjct: 61  KDAKSNKYANKPAEGHAKKADAAPKRFIREFR-NVDVDAYEVGQEVSVDTFVAGDVIDVT 119

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ GKGF GA+KRH       +H  S  HR+  S G   D  RVFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQSRGPMSH-SSHFHRAPDSVGMASDASRVFKGQKMPGRMGGNTV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           TV+NLEVV VD +  +ILVKG VPG KK   + +R S K  
Sbjct: 179 TVQNLEVVQVDTENKVILVKGNVPGPKKG-LVEIRTSIKKG 218


>gi|262277094|ref|ZP_06054887.1| 50S ribosomal protein L3 [alpha proteobacterium HIMB114]
 gi|262224197|gb|EEY74656.1| 50S ribosomal protein L3 [alpha proteobacterium HIMB114]
          Length = 260

 Score =  241 bits (615), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 104/212 (49%), Positives = 139/212 (65%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V +KLGMT  +   G  +PVTVL ++  +VV     +K GY AV VG G  K   
Sbjct: 1   MAIGLVGKKLGMTQRFFENGESLPVTVLKIEKAKVVDVINKEKRGYSAVLVGYGHIKNSK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++K M+GFF+  +  PKK L EFR++   +L P G+  +       + VDV   TIGKGF
Sbjct: 61  LTKQMKGFFAKKSQEPKKILKEFRLENTKELKP-GTEINLDVLKDKKYVDVRAKTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G+MKRHNFGG+RATHGVSISHR+HGSTG  QDPG+VFK KKMAG MG    T   LEVV
Sbjct: 120 AGSMKRHNFGGMRATHGVSISHRAHGSTGQCQDPGKVFKGKKMAGHMGAKYRTTLGLEVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
             D +  L+ +KG VPG+ KNS++ ++++ K+
Sbjct: 180 EADLENNLLYLKGAVPGS-KNSYVEIQEAIKN 210


>gi|217077283|ref|YP_002335001.1| ribosomal protein L3 [Thermosipho africanus TCF52B]
 gi|226730580|sp|B7IHU6|RL3_THEAB RecName: Full=50S ribosomal protein L3
 gi|217037138|gb|ACJ75660.1| ribosomal protein L3 [Thermosipho africanus TCF52B]
          Length = 205

 Score =  240 bits (614), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 87/208 (41%), Positives = 123/208 (59%), Gaps = 6/208 (2%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RK+GMT ++  + + IPVTV+    C VV  +T+D +GY A+Q+G  EAK   V+KP
Sbjct: 4   IIGRKVGMTRIF-KDDKVIPVTVIKAGPCYVVQKKTIDTDGYNAIQIGFEEAK--KVNKP 60

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M G F    V P K L EFRV+  ++   +G       F  G  +D+TG + G+GF+GAM
Sbjct: 61  MEGVFKKAGVKPLKILKEFRVENPEEF-ELGQEIKVDIFAEGDKIDITGWSKGRGFAGAM 119

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR  F G   +HG    HR  GS G   +P R+FK KKM G+ G  RVT+ N E+V +D 
Sbjct: 120 KRWGFRGGPKSHGA-KFHRELGSVGQHSEPARIFKGKKMPGQYGNERVTILNSEIVKIDV 178

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +  LI VKG VPGA +   +L+R + + 
Sbjct: 179 ENNLIAVKGGVPGA-RGGLVLIRTAKRG 205


>gi|255530514|ref|YP_003090886.1| 50S ribosomal protein L3 [Pedobacter heparinus DSM 2366]
 gi|255343498|gb|ACU02824.1| ribosomal protein L3 [Pedobacter heparinus DSM 2366]
          Length = 205

 Score =  240 bits (614), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 87/205 (42%), Positives = 130/205 (63%), Gaps = 4/205 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++ +G+ IP TV+    C V   +T +K+GY++VQ+   EAK KN +
Sbjct: 2   SGIIGKKVGMTSIFDADGKNIPCTVIEAGPCVVTQVKTEEKDGYVSVQLSFDEAKEKNTT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
            P++G F+    +PK+KL EF  +  ++ L +G   + + F  G  VDV G + GKGF G
Sbjct: 62  MPLKGHFAKAKTTPKRKLVEF--EPFEESLNLGDTVTVNIFNEGDFVDVVGTSKGKGFQG 119

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG    THG     R+ GS G    P RVFK  +MAGRMGG+RV V+NL+V+ 
Sbjct: 120 VVKRHGFGGVGGQTHGQHNRMRAPGSLGAASYPSRVFKGMRMAGRMGGDRVKVQNLQVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           V   + L++V G VPGA K S++++
Sbjct: 180 VYADQNLVVVSGSVPGA-KGSYVIL 203


>gi|282891949|ref|ZP_06300428.1| hypothetical protein pah_c200o113 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498209|gb|EFB40549.1| hypothetical protein pah_c200o113 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 220

 Score =  240 bits (614), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 83/219 (37%), Positives = 122/219 (55%), Gaps = 10/219 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK- 59
           M   ++ +K GMT  ++  G  I  TV+ ++   V   +T +K+GY AVQ+G  + +   
Sbjct: 1   MAIKLMGKKRGMTQRFDEAGNLIVCTVIEVEPNVVTQLKTKEKDGYNAVQLGFEKIEAND 60

Query: 60  ------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113
                   SKP++G ++   V P++   EFR+ +D     +G       F     +DV G
Sbjct: 61  PRTVKRRTSKPLQGHYAKAGVEPRRFSGEFRI-EDSAEFSLGQELKVDLFKEAGYLDVIG 119

Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
           ++ GKG+ G MK HNFGG  A HG S  HR  GSTG R  PGR     K A  MG +RVT
Sbjct: 120 VSKGKGYQGVMKLHNFGGGPAAHG-SGFHRHAGSTGMRSTPGRCLPGGKRASHMGVDRVT 178

Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V+NL++V VD++  LILV+G VPGA  +S + +R++ K 
Sbjct: 179 VENLKIVLVDEENNLILVQGQVPGAY-DSLLFLREARKK 216


>gi|124003662|ref|ZP_01688510.1| ribosomal protein L3 [Microscilla marina ATCC 23134]
 gi|123990717|gb|EAY30184.1| ribosomal protein L3 [Microscilla marina ATCC 23134]
          Length = 208

 Score =  240 bits (614), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 90/209 (43%), Positives = 125/209 (59%), Gaps = 9/209 (4%)

Query: 3   SGVVARKLGMTCVYNIEG---RRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           SG++ +K+GMT +Y+ EG   ++IP T++    C V   +T   +GY A+QVG  + K K
Sbjct: 2   SGLIGKKIGMTSIYSAEGTVAKQIPCTLIQAGPCVVTQVKTTKNDGYEAIQVGFDDKKEK 61

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGK 118
           N  KP++G F+  N +PK+KL EF+  KD   + +G   +    F  G  VDV G + GK
Sbjct: 62  NTPKPLQGHFNKANTTPKRKLVEFQFNKD---VELGQEITVGDVFEEGDFVDVVGTSKGK 118

Query: 119 GFSGAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           GF G +KRH F G   ATHG     R  GS G    P RVFK  KMAGR G  RV ++NL
Sbjct: 119 GFQGVVKRHGFHGVGGATHGQHNRQRHPGSIGAASYPARVFKGLKMAGRTGNKRVKIQNL 178

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILV 206
            +V +  ++ LILV G VPGA KNS++++
Sbjct: 179 RIVKIYPEQNLILVSGSVPGA-KNSYVII 206


>gi|330850884|ref|YP_004376634.1| 50S ribosomal protein L3 [Fistulifera sp. JPCC DA0580]
 gi|328835704|dbj|BAK19000.1| 50S ribosomal protein L3 [Fistulifera sp. JPCC DA0580]
          Length = 207

 Score =  240 bits (614), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 78/206 (37%), Positives = 124/206 (60%), Gaps = 2/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT +++  G  IPVT+L +  C V   +T  K+GY ++QVG G    K 
Sbjct: 1   MSVGLLGNKIGMTQIFDESGNIIPVTILKVGPCVVTQVKTKSKDGYDSIQVGYGNVSPKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G     ++ P + L EFRV ++++   +G +   + F+ GQL+++ G +IGKGF
Sbjct: 61  LTQPELGHLQKSDIQPLRYLKEFRVSEENE-FNLGQILDVNSFSPGQLINIQGKSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KR+NF     THG S +HR+ GS G    PGRV   KKM+G++G    T+K L+V+
Sbjct: 120 SGLQKRYNFSRGPMTHG-SKNHRAPGSIGMGTSPGRVLPGKKMSGQVGNKVTTIKKLKVI 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
            V+ +  ++++KG VPG   N   +V
Sbjct: 179 QVNLEENILVIKGSVPGKPGNLLSIV 204


>gi|291280148|ref|YP_003496983.1| 50S ribosomal protein L3 [Deferribacter desulfuricans SSM1]
 gi|290754850|dbj|BAI81227.1| 50S ribosomal protein L3 [Deferribacter desulfuricans SSM1]
          Length = 214

 Score =  240 bits (614), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 99/217 (45%), Positives = 127/217 (58%), Gaps = 4/217 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEA-KVK 59
           M SG++ +K+GMT V+  EG  IPVTVL +  C VV  +  +K+GY A+Q+G  +  K+K
Sbjct: 1   MLSGLLGKKIGMTQVFTSEGLVIPVTVLQVGPCVVVQKKVKEKDGYNALQIGFEKVTKLK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            V+KPM G F   NV P K L E +V   D+    G   +   F  G  VDV G++ GKG
Sbjct: 61  KVNKPMLGHFKKHNVEPLKYLKEVKVDNPDEFNE-GQEITVEIFNEGDFVDVQGISKGKG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKRH F G  A+HG S  HR+ GS G  + PG   K +KM GRMGG +VTV  LEV
Sbjct: 120 FQGVMKRHGFAGGPASHG-SNFHRAPGSVGMCEFPGETPKGRKMPGRMGGEKVTVMGLEV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           V V   + L+LVKG VPG   NS + VR + K     
Sbjct: 179 VKVIPDKNLVLVKGAVPG-HNNSLVYVRKAVKVRKRA 214


>gi|297625782|ref|YP_003687545.1| 50S ribosomal protein L3 [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
 gi|296921547|emb|CBL56101.1| 50S ribosomal protein L3 [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 224

 Score =  240 bits (614), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 94/211 (44%), Positives = 124/211 (58%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT +++   R +PVTV+    C V   RT D +GY AVQ+G G  + K+V+
Sbjct: 13  KGLLGTKLGMTQLWDENNRLVPVTVIQAGPCVVTQVRTPDTDGYSAVQLGYGAIRAKSVT 72

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V+P+K L E R   D     +G    P  F    +VDVTG+T GKG +G
Sbjct: 73  KPAAGQFARAKVTPRKYLAEIRTS-DASEYTLGQELGPDTFRTDDVVDVTGVTKGKGTAG 131

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR  F GL A+HGV   HRS G  G    PG VFK  +MAGRMG  R TV+NL V  V
Sbjct: 132 VVKRWGFKGLGASHGVHRKHRSPGGIGACATPGHVFKGLRMAGRMGNARKTVQNLAVAGV 191

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D  +GLILV+G VPG  K + +++R + K  
Sbjct: 192 DADKGLILVRGAVPG-NKGALVVLRTAAKKG 221


>gi|52840574|ref|YP_094373.1| 50S ribosomal protein L3 [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|54296365|ref|YP_122734.1| 50S ribosomal protein L3 [Legionella pneumophila str. Paris]
 gi|148361053|ref|YP_001252260.1| 50S ribosomal protein L3 [Legionella pneumophila str. Corby]
 gi|81822648|sp|Q5X859|RL3_LEGPA RecName: Full=50S ribosomal protein L3
 gi|81823474|sp|Q5ZYP3|RL3_LEGPH RecName: Full=50S ribosomal protein L3
 gi|166233152|sp|A5IHR4|RL3_LEGPC RecName: Full=50S ribosomal protein L3
 gi|52627685|gb|AAU26426.1| 50S ribosomal protein L3 [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|53750150|emb|CAH11542.1| 50S ribosomal subunit protein L3 [Legionella pneumophila str.
           Paris]
 gi|148282826|gb|ABQ56914.1| 50S ribosomal protein L3 [Legionella pneumophila str. Corby]
          Length = 216

 Score =  240 bits (614), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 93/217 (42%), Positives = 129/217 (59%), Gaps = 1/217 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  EG  +PV+V+ +   +V   +T   +GY AVQ+  G  K   
Sbjct: 1   MMIGLLGRKIGMTRVFTPEGVSVPVSVVEVQPNRVSQVKTAANDGYSAVQLTGGTKKSSK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKP+ G F+   +       EFR+  +D   P   +     FT GQ VDV+G+T GKGF
Sbjct: 61  VSKPVAGHFAKAQIDAGDMQVEFRIDSEDAFTPGQVISVADVFTAGQYVDVSGLTKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNF    A+HG S SHR  GS G  Q PGRVFK KKMAG MG  R T+++LE+V
Sbjct: 121 AGTVKRHNFRTQDASHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNARCTIQSLELV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
            VD +R L+L+KG +PGA   S + ++ + K     +
Sbjct: 181 KVDSERNLLLIKGAIPGAP-GSRVEIKPAVKKQARGE 216


>gi|320335523|ref|YP_004172234.1| 50S ribosomal protein L3 [Deinococcus maricopensis DSM 21211]
 gi|319756812|gb|ADV68569.1| 50S ribosomal protein L3 [Deinococcus maricopensis DSM 21211]
          Length = 206

 Score =  240 bits (613), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 90/210 (42%), Positives = 119/210 (56%), Gaps = 7/210 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  K+GMT V+  + + IPVTV+    C VV  +T   +GY AVQVG      K ++
Sbjct: 2   KGILGTKVGMTQVW-KDDKVIPVTVVLAGPCPVVQRKTTATDGYEAVQVGFMPKNEKRIN 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +P+ G      VS  + L EFR     +  P G   +   F  G+ +D TG + GKG  G
Sbjct: 61  RPLMGHLKKAGVSGVRYLREFR-----NFTPEGDTITVDIFGAGEKIDATGTSKGKGTQG 115

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKR NF G  A+HG    HR  GS G R+ PGRV+K K+MAGRMG  RVTV+NLEVV V
Sbjct: 116 VMKRWNFKGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGRMGNERVTVQNLEVVEV 175

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
                LILVKG +PGA     +++R + K 
Sbjct: 176 RAGENLILVKGAIPGAN-GGLVVLRQAVKG 204


>gi|206602675|gb|EDZ39156.1| Ribosomal protein L3 [Leptospirillum sp. Group II '5-way CG']
          Length = 207

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 78/210 (37%), Positives = 128/210 (60%), Gaps = 4/210 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M++ ++ RKLGMT +Y   G+ +PVT++    C+++  +T +K GY A Q+G      K+
Sbjct: 1   MKT-LLGRKLGMTQIYLPSGQAVPVTIVEAGPCEILQVKTSEKEGYSAAQIGYFPISPKH 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP RG       +  + + EF+V++  +    GS+ +   F  G  +D+TG + GKGF
Sbjct: 60  LNKPERGHQQKYAKNLYRYVREFKVEE--NTQSPGSILTVEIFQEGDSLDITGQSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRH+F G  ATHG S+ HR  GS G    P RV KNKK+ G MG  R+TVKNL+++
Sbjct: 118 AGVMKRHHFRGGDATHG-SMFHREPGSIGSSAYPSRVLKNKKLPGHMGDKRITVKNLKLI 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           +V  +  L+ +KG +PG+  +  ++ +++ 
Sbjct: 177 AVKPEANLLFIKGAIPGSNGSFVVVNKNTI 206


>gi|158520725|ref|YP_001528595.1| ribosomal protein L3 [Desulfococcus oleovorans Hxd3]
 gi|226725163|sp|A8ZV57|RL3_DESOH RecName: Full=50S ribosomal protein L3
 gi|158509551|gb|ABW66518.1| ribosomal protein L3 [Desulfococcus oleovorans Hxd3]
          Length = 208

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 78/207 (37%), Positives = 117/207 (56%), Gaps = 3/207 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V++ +G  +PVTV+    C V   +T++ +GY A+Q+G  E K   
Sbjct: 1   MCRGIIGRKIGMTGVFSDQGEYVPVTVIEAGPCVVTQIKTVETDGYSALQLGFLEKKASK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+ G F          + E  V  D     +G V +   F+ G+ V V G+  G+GF
Sbjct: 61  INKPLAGHFKKSGGVGFAYVREMAVD-DPSAYTLGQVINAELFSAGEKVHVAGLMKGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH F G + THG   SHR  GS G    P +VFK +K+ GR G  R+T KNL++ 
Sbjct: 120 AGVVKRHGFAGGKDTHGCH-SHRVPGSIGTSAWPSKVFKGRKLPGRYGNTRITTKNLKIF 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207
            +  +  LIL+KG VPG+  N  + +R
Sbjct: 179 DIQPETNLILIKGAVPGSN-NGLVEIR 204


>gi|145219061|ref|YP_001129770.1| 50S ribosomal protein L3 [Prosthecochloris vibrioformis DSM 265]
 gi|189042857|sp|A4SCQ9|RL3_PROVI RecName: Full=50S ribosomal protein L3
 gi|145205225|gb|ABP36268.1| LSU ribosomal protein L3P [Chlorobium phaeovibrioides DSM 265]
          Length = 209

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 85/207 (41%), Positives = 121/207 (58%), Gaps = 1/207 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT +YN +   +P T++    C V   ++   +GY A QVG GE K   V+KP
Sbjct: 4   ILGKKIGMTRLYNEKREAVPCTIIQAGPCFVTQVKSAGIDGYDAYQVGIGERKEAKVTKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M G +    V+P     EF     D  L  GS      FT G++V V G++ GKGF+G +
Sbjct: 64  MLGHYKKAGVAPGYMTAEFDTSMFDGELTAGSPVLVESFTEGEIVKVQGVSKGKGFAGVV 123

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHNFGG + THG S   R+ GS G   DP + FK  KM GRMG + +TV+NL+V+ +  
Sbjct: 124 KRHNFGGGQRTHGQSDRLRAPGSIGGASDPSKTFKGTKMGGRMGSDTITVRNLQVIKIMP 183

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
           +  LI+VKG VPG  KNS++ +  + K
Sbjct: 184 ESSLIMVKGSVPGP-KNSYVRIVSTKK 209


>gi|50309329|ref|XP_454671.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49643806|emb|CAG99758.1| KLLA0E16039p [Kluyveromyces lactis]
          Length = 273

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 100/214 (46%), Positives = 146/214 (68%), Gaps = 2/214 (0%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R G +++K+GM   +  E G+RI  TVL LDN +V++HRT  +N Y A Q+G G    +
Sbjct: 58  LRCGALSKKVGMMPYFEKETGKRIAATVLQLDNNEVILHRTPAENNYWACQIGYGNKSPE 117

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV++ M G F++  V+PK+K+ EFRV+ +  LLPVGS+  PS+F  GQ VD+  ++ GKG
Sbjct: 118 NVTRQMLGHFAAHVVNPKEKVTEFRVKDESGLLPVGSLIKPSWFKPGQYVDLRSISKGKG 177

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR+ F GL+A+HGVS+SHRS GS G  Q PGRV   KKM G MG + VT++N++V
Sbjct: 178 FQGVMKRYGFKGLKASHGVSVSHRSGGSYGQNQTPGRVLPGKKMPGHMGVDTVTIQNVQV 237

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           + V+D+ G +LVKG V G    +++ ++D+ K  
Sbjct: 238 LDVNDETGTVLVKGSVAGPN-GAFVKIQDAIKKP 270


>gi|327402783|ref|YP_004343621.1| 50S ribosomal protein L3P [Fluviicola taffensis DSM 16823]
 gi|327318291|gb|AEA42783.1| LSU ribosomal protein L3P [Fluviicola taffensis DSM 16823]
          Length = 204

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 90/205 (43%), Positives = 125/205 (60%), Gaps = 5/205 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT VY+ EG+  P TV+    C V   +T D++GY A+Q+G GE + KN   
Sbjct: 3   GIIGKKIGMTSVYSAEGKATPCTVIEAGPCVVTQVKTQDRDGYEAIQLGFGERREKNTPN 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
            ++G F   N +PK KL EF   K  D L +G V     F  G+ V + G + GKGF G 
Sbjct: 63  ALKGHFKKANTTPKSKLVEF---KGFDGLNLGDVVDVQLFEQGEFVGIAGTSKGKGFQGV 119

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRHNFGG  ++THG     R+ GS G    P RVFK  +MAG+MG  RVTV+NLEV+ V
Sbjct: 120 VKRHNFGGVGQSTHGQHNRLRAPGSIGACSYPARVFKGMRMAGQMGNKRVTVENLEVLRV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
              + LI+VKG +PG  K S ++++
Sbjct: 180 LADKNLIVVKGSIPGP-KGSTVIIQ 203


>gi|112791754|gb|ABI22152.1| ribosomal protein L3 [Flavobacterium hibernum]
          Length = 205

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 84/206 (40%), Positives = 123/206 (59%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C V   RT   +GY A+Q+G  +   K+ +
Sbjct: 2   SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTKGVDGYEALQLGFDDKNEKHST 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F       KKK+ EF+         +G +   S F  G+ VDV G++ GKGF G
Sbjct: 62  KAALGHFKKAGTVAKKKVVEFQ--DFATEQKLGDLIDVSIFAEGEFVDVQGVSKGKGFQG 119

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG  +ATHG     R+ GS G    P RVFK  +MAGRMGG+ V V+NL V+ 
Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGGDNVKVQNLRVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L+++KGCVPG  KNS+++++
Sbjct: 180 VVAEKNLLVIKGCVPG-HKNSYVIIQ 204


>gi|313680515|ref|YP_004058254.1| LSU ribosomal protein l3p [Oceanithermus profundus DSM 14977]
 gi|313153230|gb|ADR37081.1| LSU ribosomal protein L3P [Oceanithermus profundus DSM 14977]
          Length = 208

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 7/209 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  K+GMT ++    R IPVTV+    C VV  ++ +++GY AVQ+G    + K V+
Sbjct: 2   KGILGAKVGMTQIW-KNDRAIPVTVVLAGPCPVVQRKSPERDGYAAVQLGFVPLEPKRVN 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KPM+G F+  +  P + L E R     D  P G V +   F  G  VDVTG + G+G +G
Sbjct: 61  KPMKGHFAKFSAEPVRYLREIR-----DFEPEGDVVTVEIFQPGDKVDVTGTSKGRGTAG 115

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKR NF G  A+HG    HR  GS G R+ PGRV+K KKMAG  G  R+TV+NLEVV V
Sbjct: 116 VMKRWNFAGGPASHGAHRIHRHGGSIGQRKAPGRVYKGKKMAGHYGAERITVQNLEVVEV 175

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             +  L+L+KG +PG      ++VR++ +
Sbjct: 176 IPEENLLLIKGAIPGPN-GGLVVVRETTR 203


>gi|320103617|ref|YP_004179208.1| 50S ribosomal protein L3P [Isosphaera pallida ATCC 43644]
 gi|319750899|gb|ADV62659.1| LSU ribosomal protein L3P [Isosphaera pallida ATCC 43644]
          Length = 212

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 83/209 (39%), Positives = 116/209 (55%), Gaps = 1/209 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT +Y  +G+ +PVTVL    C V+  +T + +GY AVQ+G  + K K 
Sbjct: 1   MVVGLLGRKVGMTQIYREDGQAVPVTVLECGPCTVLQVKTPETDGYCAVQLGYLDRKRKT 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +   RG       +  K+      Q +   L +G   + S F   + VDVTG++ G+GF
Sbjct: 61  ATAAARGHARKAGNAEPKRYIREIRQDEPPTLKLGDQLTVSVFEAIKRVDVTGVSKGRGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH F GLRATHGV   HR  GS+G   DP R  K  +  G  G  +VT  NLEVV
Sbjct: 121 AGVVKRHGFRGLRATHGVKRMHRHPGSSGPSADPSRTRKGIRKPGHFGHAKVTALNLEVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            VD    L++VKG VPG     ++ VR +
Sbjct: 181 KVDPDANLLVVKGAVPGPN-GGFVTVRQT 208


>gi|227494545|ref|ZP_03924861.1| ribosomal protein L3 [Actinomyces coleocanis DSM 15436]
 gi|226832279|gb|EEH64662.1| ribosomal protein L3 [Actinomyces coleocanis DSM 15436]
          Length = 221

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 95/211 (45%), Positives = 132/211 (62%), Gaps = 2/211 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
             ++ RKLGMT V++ +GR +PVTV+ +    V   RT + +GY A Q+G GE   + ++
Sbjct: 13  KALLGRKLGMTQVWDNDGRVVPVTVVQVGTNVVTQVRTEEVDGYTAAQIGFGEVDARRIT 72

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    V+P++ L E R   D D   +G     S F  G  VDV+G + GKGF+G
Sbjct: 73  KPLAGHFEKAGVAPRRHLVEVRTS-DVDAFELGQELLASVFEAGDKVDVSGKSKGKGFAG 131

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRH F G  A+HG   +HR  GS G    PGRVFK  +MAGRMG  R TV+NL++ +V
Sbjct: 132 AMKRHGFRGAPASHGAHRNHRKPGSIGACATPGRVFKGVRMAGRMGNVRRTVQNLDIHAV 191

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++GL+L+ G +PG  KN+ +LVR+S K A
Sbjct: 192 DVEKGLLLIHGAIPGP-KNAVVLVRNSVKGA 221


>gi|295135701|ref|YP_003586377.1| 50S ribosomal protein L3 [Zunongwangia profunda SM-A87]
 gi|294983716|gb|ADF54181.1| 50S ribosomal protein L3 [Zunongwangia profunda SM-A87]
          Length = 203

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 81/206 (39%), Positives = 126/206 (61%), Gaps = 6/206 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C +   RT + +GY A+Q+G  + K    +
Sbjct: 2   SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCVITQVRTNEVDGYEALQLGFDDKKTA--N 59

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G      V+ ++K+ EF+  + D    +G   +  +F  G+ VD++G + GKGF G
Sbjct: 60  KAATGHAKKAGVAAQRKVVEFQGFEGD--YKLGDTINVEHFKEGEFVDISGTSKGKGFQG 117

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG  ++THG     R+ GS G    P RVFK  +MAGRMGG +V V+NL V+ 
Sbjct: 118 VVKRHGFGGVGQSTHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGEKVKVENLRVLK 177

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L++VKGCVPG  KNS++++R
Sbjct: 178 VVAEKNLLVVKGCVPG-HKNSYVIIR 202


>gi|196003476|ref|XP_002111605.1| hypothetical protein TRIADDRAFT_3973 [Trichoplax adhaerens]
 gi|190585504|gb|EDV25572.1| hypothetical protein TRIADDRAFT_3973 [Trichoplax adhaerens]
          Length = 250

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 92/210 (43%), Positives = 136/210 (64%), Gaps = 3/210 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEA-KVKN 60
           R+G++  KLGM  ++  +G R+PVT++ +  C V+ ++T  K+GY AVQVGA +  K+  
Sbjct: 14  RTGLIGVKLGMMPMWMKDGTRVPVTLIKIQQCHVLHNKTKAKDGYCAVQVGAVDRLKLLY 73

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V +   G F+   V+PK+K++EF+V  DD L+  G++    +F  GQ VDV   TIGKGF
Sbjct: 74  VRRAQLGHFARAGVNPKRKVWEFKVS-DDALILRGTLLHAMHFVPGQYVDVKAKTIGKGF 132

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G MK+H   G  ATHGVS++HR  G+TG  Q+PGR++  KKMAGRMG    T KNL ++
Sbjct: 133 QGVMKKHGMKGQPATHGVSLTHRKMGATGGGQEPGRIWPGKKMAGRMGNKYHTTKNLRIL 192

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
            ++ K  ++ VKG VPG  +N +I + D+ 
Sbjct: 193 RINTKYDILYVKGAVPG-HENQFIRITDAI 221


>gi|284929561|ref|YP_003422083.1| 50S ribosomal protein L3P [cyanobacterium UCYN-A]
 gi|284810005|gb|ADB95702.1| LSU ribosomal protein L3P [cyanobacterium UCYN-A]
          Length = 212

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 85/210 (40%), Positives = 120/210 (57%), Gaps = 4/210 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT +++   G  IPVTV+ +  C +   +T D +GY A+Q+G  E K K
Sbjct: 1   MAIGLLGTKLGMTQIFDDETGAAIPVTVMKVGPCTITQIKTSDTDGYNAIQIGYSEVKEK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            + KP  G       SP + L E+RV  D     +G   +   F  G LVDVTG ++G+G
Sbjct: 61  ALVKPELGHLKKAGASPLRHLKEYRVD-DIQPYQLGETVNVDLFNTGDLVDVTGTSMGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G  KRHNF     THG S SHR  GSTG    PGRV+  KKMAG+ G ++VT + L+V
Sbjct: 120 FAGYQKRHNFKRGNMTHG-SKSHRLPGSTGAGTTPGRVYPGKKMAGQYGASKVTTRRLKV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           V +D +  L+L+KG +PG      + +  +
Sbjct: 179 VQIDAECNLLLIKGAIPGKP-GGLLNITPA 207


>gi|229496170|ref|ZP_04389890.1| 50S ribosomal protein L3 [Porphyromonas endodontalis ATCC 35406]
 gi|229316748|gb|EEN82661.1| 50S ribosomal protein L3 [Porphyromonas endodontalis ATCC 35406]
          Length = 205

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 79/204 (38%), Positives = 115/204 (56%), Gaps = 4/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G   P TV+ L  C V   +T + +GY A+Q+G  E   K+ +K
Sbjct: 3   GLLGKKIGMTSVFSADGVNTPCTVIELGPCVVTQVKTSEHDGYDALQLGFQETTEKHATK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+P + L EF+    D    +G       F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVAPMRHLAEFKGFSGD--YKLGDTIKVDIFENVVYVDVIGTSKGKGFQGV 120

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           + RH FGG  ++THG     R+ G+ G    P +VFK  +MAG+ G  RVTV+NLEV+ V
Sbjct: 121 VGRHGFGGVGQSTHGQHNRLRAPGAVGACSYPAKVFKGTRMAGQTGNERVTVQNLEVIKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
             +  L+L+KG +PG  K S + V
Sbjct: 181 MPEHNLLLIKGSIPG-HKGSIVAV 203


>gi|224542238|ref|ZP_03682777.1| hypothetical protein CATMIT_01413 [Catenibacterium mitsuokai DSM
           15897]
 gi|224524780|gb|EEF93885.1| hypothetical protein CATMIT_01413 [Catenibacterium mitsuokai DSM
           15897]
          Length = 227

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 84/219 (38%), Positives = 125/219 (57%), Gaps = 8/219 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT V+  +G+ IPVTV+      V+  +T++ +GY A+QVG  + + K  +
Sbjct: 2   KGILGRKIGMTQVFATDGKLIPVTVIEATPNVVLQKKTVETDGYNAIQVGFEDKREKLAN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP +G  +  N +PK+ + EFR  +      VG   S   F  G++VDVTG + GKG+ G
Sbjct: 62  KPEKGVVAKANTAPKRFIKEFRFDEMMS-YEVGQTVSVDSFVAGEVVDVTGTSKGKGYQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRH        HG S +HR  GS G    P R+   K + G+MGGN  TV+NLE+V+V
Sbjct: 121 VIKRHGQHIGPKGHG-SGAHRIVGSMGPIA-PNRIAPGKNLPGQMGGNTRTVQNLEIVAV 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
           D ++ ++LV G VPG KK   +      KS +   GK +
Sbjct: 179 DVEKNVLLVSGSVPGPKKGLVV-----VKSGIKANGKTN 212


>gi|193214800|ref|YP_001995999.1| 50S ribosomal protein L3 [Chloroherpeton thalassium ATCC 35110]
 gi|226725149|sp|B3QY24|RL3_CHLT3 RecName: Full=50S ribosomal protein L3
 gi|193088277|gb|ACF13552.1| ribosomal protein L3 [Chloroherpeton thalassium ATCC 35110]
          Length = 208

 Score =  240 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 80/208 (38%), Positives = 118/208 (56%), Gaps = 1/208 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           S ++ +K+GMT +++   + IP TV+    C V   +T+DK+GY A Q+   + K    +
Sbjct: 2   SAILGKKIGMTSLFDENRKAIPCTVIEAGPCFVSQVKTVDKDGYAAYQICFDKKKENRTA 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V P  K+ EFR +   D L  G     S F  G  V V+G++ GKGF+G
Sbjct: 62  KPQLGHFQKSGVEPSYKMSEFRKEIFADELNAGDEVKVSIFKEGDTVKVSGVSKGKGFAG 121

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR++FGG   THG S   R+ GS G    P R FK ++MAGR G + VT++ L+VV V
Sbjct: 122 VVKRYHFGGGSKTHGQSDRLRAPGSVGGSSFPSRTFKGQRMAGRKGSDSVTIRGLKVVKV 181

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSF 210
             +  L+++KG VPG   NS++ +  S 
Sbjct: 182 LPESNLLVIKGAVPGPN-NSYLEIVTSK 208


>gi|124514443|gb|EAY55956.1| ribosomal protein L3 [Leptospirillum rubarum]
          Length = 207

 Score =  240 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 77/206 (37%), Positives = 125/206 (60%), Gaps = 3/206 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RKLGMT +Y   G+ +PVT++    C+V+  +T +K GY A Q+G      K+++KP
Sbjct: 4   LLGRKLGMTQIYLPSGQAVPVTIVEAGPCEVLQVKTSEKEGYSAAQIGYFPVSPKHLNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
            RG       +  + + EF+V+++      G++ +   F  G  +D+TG + GKGF+G M
Sbjct: 64  ERGHQQKYAKNLYRYVREFKVEENTQA--PGNILTVEIFQEGDSLDITGQSKGKGFAGVM 121

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH+F G  ATHG S+ HR  GS G    P RV KNKK+ G MG  R+TVKNL++++V  
Sbjct: 122 KRHHFRGGDATHG-SMFHREPGSIGSSAYPSRVLKNKKLPGHMGDKRITVKNLKLIAVKP 180

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSF 210
           +  L+ +KG +PG+  +  ++ +++ 
Sbjct: 181 EANLLFIKGAIPGSNGSFVVVNKNTI 206


>gi|15644248|ref|NP_229300.1| 50S ribosomal protein L3 [Thermotoga maritima MSB8]
 gi|148270422|ref|YP_001244882.1| 50S ribosomal protein L3 [Thermotoga petrophila RKU-1]
 gi|170289183|ref|YP_001739421.1| ribosomal protein L3 [Thermotoga sp. RQ2]
 gi|281412729|ref|YP_003346808.1| 50S ribosomal protein L3 [Thermotoga naphthophila RKU-10]
 gi|585886|sp|P38515|RL3_THEMA RecName: Full=50S ribosomal protein L3
 gi|166234605|sp|A5IM83|RL3_THEP1 RecName: Full=50S ribosomal protein L3
 gi|226730584|sp|B1LBP0|RL3_THESQ RecName: Full=50S ribosomal protein L3
 gi|4982064|gb|AAD36566.1|AE001798_31 ribosomal protein L3 [Thermotoga maritima MSB8]
 gi|437923|emb|CAA79777.1| ribosomal protein L3 [Thermotoga maritima]
 gi|147735966|gb|ABQ47306.1| LSU ribosomal protein L3P [Thermotoga petrophila RKU-1]
 gi|170176686|gb|ACB09738.1| ribosomal protein L3 [Thermotoga sp. RQ2]
 gi|281373832|gb|ADA67394.1| 50S ribosomal protein L3 [Thermotoga naphthophila RKU-10]
          Length = 207

 Score =  240 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 93/206 (45%), Positives = 128/206 (62%), Gaps = 6/206 (2%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RK+GMT V+ +    +PVTV+    C VV  +T++K+GY AVQ+G  +AK   V+KP
Sbjct: 4   IIGRKIGMTRVF-VGNDSVPVTVIKAGPCVVVQKKTVEKDGYNAVQLGFEKAK--KVNKP 60

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + G F    V P K L EFRV+  D+  P G V     F  G+ VDVTG T G+GF+GAM
Sbjct: 61  LAGHFKKFGVEPMKILREFRVENPDEYEP-GQVIKVDVFEKGEYVDVTGWTKGRGFAGAM 119

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR  F G   +HG S  HR  GS G   +P +++K KKM GR G  RVTV+NL+VV +D 
Sbjct: 120 KRWGFSGGPKSHG-SKFHRELGSVGQHTEPAKIWKGKKMPGRYGNERVTVRNLQVVDIDP 178

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSF 210
           +  L++VKG VPGA +   +L+R + 
Sbjct: 179 ENDLLVVKGGVPGA-RGGLVLIRSAK 203


>gi|170017943|ref|YP_001728862.1| ribosomal protein L3 [Leuconostoc citreum KM20]
 gi|226730530|sp|B1MW14|RL3_LEUCK RecName: Full=50S ribosomal protein L3
 gi|169804800|gb|ACA83418.1| Ribosomal protein L3 [Leuconostoc citreum KM20]
          Length = 227

 Score =  240 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 79/219 (36%), Positives = 115/219 (52%), Gaps = 8/219 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  I VT +      V+  + +  +GY A+Q+G  + +   
Sbjct: 1   MTKGILGRKVGMTQVFTESGELIAVTAVEATPNVVLQVKNIATDGYNAIQLGYQDKRTVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  S  N +PK+ + E  V+  +     G       F  G  VDVTG+T G GF
Sbjct: 61  SNKPEQGHASKANTTPKRYVRE--VRDAEGEFNAGDEIKVDTFQAGDYVDVTGITKGHGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+K+         HG S  HR  GS G      RVFK K + GRMG N+ T++N+ +V
Sbjct: 119 QGAIKKLGQSRGPMAHG-SRYHRRPGSMGAI--INRVFKGKLLPGRMGNNKRTMQNVAIV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            VD +  L+L+KG VPGA K S + ++ + K  VN K  
Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTIKSTVK--VNAKHP 211


>gi|33863999|ref|NP_895559.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9313]
 gi|42559599|sp|Q7V542|RL3_PROMM RecName: Full=50S ribosomal protein L3
 gi|33635583|emb|CAE21907.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9313]
          Length = 218

 Score =  240 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 127/211 (60%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++ +GR IPVT++    C++   +T + +GY AVQ+G G+ + K 
Sbjct: 1   MSIGILGKKLGMSQFFDDQGRAIPVTLIEAGPCRITQLKTSEIDGYAAVQIGFGDTREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G  +       K L E+RV+  +  L +G+  +   F  GQ VDV+G T+G+GF
Sbjct: 61  INKPSKGHLTKSGEVLLKHLREYRVEGLEG-LELGAAITVGSFEAGQKVDVSGDTMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     +HG S +HR  GSTG    PGR++  K+MAGR GG + T + L ++
Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKRTTRGLTIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD  R L++VKG VPG    + + +R + +
Sbjct: 179 KVDSNRNLLVVKGSVPGKP-GALLNIRPAKR 208


>gi|220928207|ref|YP_002505116.1| 50S ribosomal protein L3 [Clostridium cellulolyticum H10]
 gi|254803665|sp|B8I7X9|RL3_CLOCE RecName: Full=50S ribosomal protein L3
 gi|219998535|gb|ACL75136.1| ribosomal protein L3 [Clostridium cellulolyticum H10]
          Length = 212

 Score =  240 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 87/214 (40%), Positives = 126/214 (58%), Gaps = 4/214 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+  ++ +K+GMT +++  G  IPVTV+      VV  +T++ +GY A++VG  +   K 
Sbjct: 1   MKKAMLGKKIGMTQIFDENGLVIPVTVVEAGPLTVVQKKTVETDGYDAIKVGYVKVAEKK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119
           +SKP  G FS   ++P K L EFR+ +D     VG        F  G  +DV+G++ GKG
Sbjct: 61  LSKPNLGQFSKTKLAPMKHLKEFRL-EDISGFEVGQEIKAENMFQSGDKIDVSGVSKGKG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G  KR+       THG S+ HR  GS G   +PGRVFK KK+ G MG   +TV+NLEV
Sbjct: 120 FQGVTKRYGQRTGPNTHG-SMYHRRIGSMGSGTNPGRVFKGKKLPGHMGRETITVQNLEV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V VD  R LIL+KG +PG  K   ++++++ KS 
Sbjct: 179 VRVDSDRNLILIKGAIPGP-KGGLLVIKNTVKSG 211


>gi|297588191|ref|ZP_06946835.1| 50S ribosomal protein L3 [Finegoldia magna ATCC 53516]
 gi|297574880|gb|EFH93600.1| 50S ribosomal protein L3 [Finegoldia magna ATCC 53516]
          Length = 209

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 89/208 (42%), Positives = 128/208 (61%), Gaps = 3/208 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT ++N +G  +PVTV+      V   +T +K GY A+QVG  E K K+V++P
Sbjct: 4   ILGKKIGMTQIFNEDGSVVPVTVIEAGPMVVTQIKTKEKEGYNAIQVGYIEKKEKHVNQP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           MRG F    VS KK L EF++  DD    +G       F  G +VDV G++ GKG  G++
Sbjct: 64  MRGHFGKAGVSFKKHLQEFKI-GDDQQFNLGDEIKLDIFQDGDVVDVIGISKGKGTQGSI 122

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
            RHN+      HG S SHR  G+      P RVFK +K +G+MG +RVTV+NL++V VD+
Sbjct: 123 VRHNYSRGPMGHG-SKSHRVAGARSAGSYPARVFKGRKGSGKMGHDRVTVQNLKIVKVDN 181

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +R L+L+KG VPG  K   + VR++ KS
Sbjct: 182 ERNLLLIKGAVPG-NKGGVVTVREAIKS 208


>gi|328768339|gb|EGF78386.1| hypothetical protein BATDEDRAFT_13292 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 279

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 102/213 (47%), Positives = 133/213 (62%), Gaps = 3/213 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA-GEAKVKN 60
           R+G+VA K GMT +++  G+ +PVTVL + NCQV+  R    +G   V+VGA  + +   
Sbjct: 19  RTGLVALKKGMTSIFDEWGQMVPVTVLEVSNCQVIRTRFHAGSGKHMVEVGAVSQRRSYR 78

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + +     F    VSPKKK+ EF V  D   +P G     S+F  GQ VDV G T+GKGF
Sbjct: 79  LHRAQLFHFRKYQVSPKKKITEFDVTPDAC-IPSGVRLFASHFVAGQYVDVQGKTMGKGF 137

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G MKR  FGG  A+HGVSISHRS GS G  QDPG+V+K KKM GRMGG   T +NL+V+
Sbjct: 138 QGVMKRWGFGGQPASHGVSISHRSLGSIGQCQDPGKVWKGKKMPGRMGGVNRTTQNLKVI 197

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +D++  LI VKG VPG + N ++ V DS K  
Sbjct: 198 KIDNQYNLIYVKGGVPGPE-NGYLRVTDSIKKG 229


>gi|160902256|ref|YP_001567837.1| ribosomal protein L3 [Petrotoga mobilis SJ95]
 gi|189042855|sp|A9BHA5|RL3_PETMO RecName: Full=50S ribosomal protein L3
 gi|160359900|gb|ABX31514.1| ribosomal protein L3 [Petrotoga mobilis SJ95]
          Length = 213

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 87/210 (41%), Positives = 127/210 (60%), Gaps = 4/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GMT V+  + + IPVTV+    C VV  +T++ +GY A+Q+G  E   +  +
Sbjct: 2   KGILGKKVGMTRVF-KDDKAIPVTVIKAGPCVVVQKKTVETDGYNAIQIGFEEIPERKAN 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F    V P + L EFRV+  DD   +G     + F+ G+ +D+ G + G+G+SG
Sbjct: 61  KPLMGHFKKAQVKPLRYLREFRVENVDD-YEIGQKIDVTIFSEGEKIDLIGNSKGRGYSG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKR NF G   THG S  HR  GSTG    P +VFK KKM G+ G  RVT++N EVV +
Sbjct: 120 VMKRWNFRGGENTHG-SKFHRGLGSTGMATFPSKVFKGKKMPGQYGNERVTIQNSEVVYI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +  LI VKG VPGA +   + +R++ K+
Sbjct: 179 DVQNNLIAVKGGVPGA-RGGLVTIREAVKA 207


>gi|163783267|ref|ZP_02178260.1| elongation factor Tu [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881375|gb|EDP74886.1| elongation factor Tu [Hydrogenivirga sp. 128-5-R1-1]
          Length = 236

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 96/201 (47%), Positives = 124/201 (61%), Gaps = 1/201 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  GV+ RKLGMT V+  +G  +PVTV+ +    VV  ++ +K+GY AVQVGA EAK K+
Sbjct: 1   MGIGVIGRKLGMTRVFTSDGTAVPVTVIQVPANYVVQVKSPEKDGYSAVQVGAVEAKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+ G FS  NV   + L EFRV    D      +     F  G LVDV G + G+GF
Sbjct: 61  LTKPLMGHFSKKNVKLLRYLKEFRVDNTQDYQEGQELKLEEVFKPGDLVDVVGTSKGRGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR +FGG   +HG    HR+ GS G R DPGRV+K KKMAG  G  ++ V++L VV
Sbjct: 121 AGTMKRWDFGGFPKSHG-HRYHRAVGSIGNRTDPGRVWKGKKMAGHWGAEKIRVQSLLVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKN 201
            V  + GLILVKG VPG  K 
Sbjct: 180 DVIPEEGLILVKGSVPGPNKG 200


>gi|320451300|ref|YP_004203396.1| 50S ribosomal protein L3 [Thermus scotoductus SA-01]
 gi|320151469|gb|ADW22847.1| 50S ribosomal protein L3 [Thermus scotoductus SA-01]
          Length = 206

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 97/211 (45%), Positives = 124/211 (58%), Gaps = 7/211 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  K+GMT +Y  + R +PVTV+    C VV  RT +K+GY AVQ+G      K V+
Sbjct: 2   KGILGMKVGMTRIYRED-RAVPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLPQNPKRVN 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +PM+G F+   V P + L E R     D  P G V +   F  G+ VDVTG + G+G +G
Sbjct: 61  RPMKGHFARAGVGPVRILKEIR-----DFNPEGDVVTVEIFKAGERVDVTGTSKGRGTAG 115

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKR NF G   +HG    HR  GS G R+ PGRV+K KKMAGR G  RVTV NLEVV V
Sbjct: 116 VMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGRYGAERVTVMNLEVVDV 175

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             +  L+LVKG VPG      +LVR + K A
Sbjct: 176 IPEENLLLVKGAVPGPN-GGLVLVRQTKKVA 205


>gi|21674998|ref|NP_663063.1| 50S ribosomal protein L3 [Chlorobium tepidum TLS]
 gi|42559650|sp|Q8KAH2|RL3_CHLTE RecName: Full=50S ribosomal protein L3
 gi|21648231|gb|AAM73405.1| ribosomal protein L3 [Chlorobium tepidum TLS]
          Length = 209

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 86/207 (41%), Positives = 117/207 (56%), Gaps = 1/207 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT +YN +   +P TV+    C V   ++ +K+GY A Q+G GE   K VSKP
Sbjct: 4   ILGKKIGMTRLYNDKREAVPCTVIQAGPCYVTQVKSTEKDGYEAYQLGFGERDEKKVSKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + G +     +P   L E         L  G+      F  G  V+V G+T GKGF+G +
Sbjct: 64  LAGHYKKAGKNPGYILSEVSKSLIVGELEAGATVPVDVFKEGDKVNVLGVTKGKGFAGVV 123

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHNFGG   THG S   R+ GS G   DP R FK  +MAGRMGG   TV+NL +V V  
Sbjct: 124 KRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFKGTRMAGRMGGKNKTVQNLVIVKVMP 183

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
           +  LI+VKG VPG  KNS++ +  + K
Sbjct: 184 ESNLIVVKGAVPGP-KNSYVKIVSTTK 209


>gi|159039834|ref|YP_001539087.1| ribosomal protein L3 [Salinispora arenicola CNS-205]
 gi|212288411|sp|A8M529|RL3_SALAI RecName: Full=50S ribosomal protein L3
 gi|157918669|gb|ABW00097.1| ribosomal protein L3 [Salinispora arenicola CNS-205]
          Length = 219

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 93/206 (45%), Positives = 125/206 (60%), Gaps = 3/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   R +PVTV+    C V   R+  K+GY AVQ+  G    + V 
Sbjct: 6   KGILGAKLGMTQVWD-NNRVVPVTVVQAGPCVVSQVRSHQKDGYAAVQLAYGAIDPRKVK 64

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G ++  +V+P++ + E R   D     +G   +   F  G  VDVTG T GKG++G
Sbjct: 65  KPISGHYTKADVAPRRHIVELRTT-DAAEYSLGQEVTVEQFPAGISVDVTGKTKGKGYAG 123

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F GLRA+HGV   HRS GS G    PGRVFK  +MAGRMGG R TV+NL V +V
Sbjct: 124 PMKRHGFHGLRASHGVERKHRSPGSIGGCATPGRVFKGTRMAGRMGGVRYTVQNLTVQAV 183

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRD 208
           D +  L+LV+G +PG  K + +LVR 
Sbjct: 184 DTENNLLLVRGAIPGP-KGALVLVRT 208


>gi|46579714|ref|YP_010522.1| 50S ribosomal protein L3 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120602809|ref|YP_967209.1| 50S ribosomal protein L3 [Desulfovibrio vulgaris DP4]
 gi|81830454|sp|Q72CI0|RL3_DESVH RecName: Full=50S ribosomal protein L3
 gi|166233138|sp|A1VEB6|RL3_DESVV RecName: Full=50S ribosomal protein L3
 gi|46449129|gb|AAS95781.1| ribosomal protein L3 [Desulfovibrio vulgaris str. Hildenborough]
 gi|120563038|gb|ABM28782.1| LSU ribosomal protein L3P [Desulfovibrio vulgaris DP4]
 gi|311233505|gb|ADP86359.1| 50S ribosomal protein L3 [Desulfovibrio vulgaris RCH1]
          Length = 209

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 85/206 (41%), Positives = 117/206 (56%), Gaps = 2/206 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           + G++ RK+G+T ++  +G  + VTV+    C V   +T+  +GY A+Q+   EAK K++
Sbjct: 4   KMGILGRKIGVTRIFASDGSAVAVTVIKAGPCPVTQVKTVATDGYDAIQIAFDEAKEKHL 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G  +       + L E R++       VGS    + F  G  V V+G +IGKG+ 
Sbjct: 64  NKPEIGHLAKAGKGLFRTLREIRLEAPAA-YEVGSELDVTLFATGDRVKVSGTSIGKGYQ 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G M+R NF G + THG    HRS GS G    PG VFK KKMAG  G   VTV NLEVV 
Sbjct: 123 GVMRRWNFAGSKDTHGCEKVHRSGGSIGNNTFPGHVFKGKKMAGHWGNESVTVLNLEVVD 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  +  +ILVKG VPG  KN  ++VR
Sbjct: 183 VRPEDNVILVKGSVPGP-KNGLVMVR 207


>gi|323340374|ref|ZP_08080631.1| 50S ribosomal protein L3 [Lactobacillus ruminis ATCC 25644]
 gi|323092150|gb|EFZ34765.1| 50S ribosomal protein L3 [Lactobacillus ruminis ATCC 25644]
          Length = 206

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 78/210 (37%), Positives = 118/210 (56%), Gaps = 6/210 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
             G++ +K+GMT V+   G  +PVTV+ +    V+  +T++ +GY A+Q+G  + +  NV
Sbjct: 3   TKGILGKKVGMTQVFTENGELVPVTVVEVGTNVVLQVKTVENDGYNAIQLGFDDQRAVNV 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP +G       +PK+ + E R  + D    VG       F  G +VDVTG + G GF 
Sbjct: 63  NKPAKGHADKAKTAPKRFVREIRDVQGD--YKVGDEVKADLFEAGDIVDVTGTSKGHGFQ 120

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR         HG S  HR  GS G      RV K K + GRMGG RVT++NL++V 
Sbjct: 121 GNIKRWGQSRGPMAHG-SRYHRRPGSMGVI--INRVMKGKMLPGRMGGKRVTIQNLDIVK 177

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            D + G++L+KG VPGA K S++ ++ + K
Sbjct: 178 ADMENGVLLIKGNVPGANK-SYVTIKSTVK 206


>gi|11467343|ref|NP_043200.1| ribosomal protein L3 [Cyanophora paradoxa]
 gi|132953|sp|P15766|RK3_CYAPA RecName: Full=50S ribosomal protein L3, cyanelle
 gi|1016144|gb|AAA81231.1| ribosomal protein L3 [Cyanophora paradoxa]
 gi|13513069|emb|CAC35457.1| L3 ribosomal protein [Cyanophora paradoxa]
          Length = 209

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 117/211 (55%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT +++  G  IPVT++    C +   +T   +GY A+QVG  E K KN
Sbjct: 1   MSIGILGTKLGMTQIFDEAGNAIPVTIIQAGPCPITQIKTTATDGYNAIQVGYRETKEKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++K   G     N S  + L EF ++  D  + V    +   F    +V++ G +IG+GF
Sbjct: 61  LTKAQLGHLQKTNNSALRVLQEFSIESSDS-IEVEKPITVELFNDNDIVNIQGYSIGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRHNF     +HG S +HR  GS G    PGRV+   +MAGR G +++T++ L++V
Sbjct: 120 SGYQKRHNFARGPMSHG-SKNHRLPGSIGAGSTPGRVYPGTRMAGRKGDSKITIRGLKIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD +R L++VKG VPG      + +    K
Sbjct: 179 KVDSERSLLIVKGSVPGKP-GGLLTITQVKK 208


>gi|86132544|ref|ZP_01051137.1| 50S ribosomal protein L3 [Dokdonia donghaensis MED134]
 gi|85816786|gb|EAQ37971.1| 50S ribosomal protein L3 [Dokdonia donghaensis MED134]
          Length = 203

 Score =  239 bits (610), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 78/206 (37%), Positives = 125/206 (60%), Gaps = 6/206 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C +   RT + +GY A+Q+G  + K    +
Sbjct: 2   SGLIGKKVGMTSIFDENGKNIPCTVIEAGPCVITQVRTKETDGYEALQLGFDDVK--KAN 59

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G         K+K+ EF+  + +    +G   +  +F  G+ VDV+G + GKGF G
Sbjct: 60  KAATGHAKKAGTVAKRKVVEFQGFEGE--FKLGDAITVDHFAEGEFVDVSGTSKGKGFQG 117

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH F G  +ATHG     R+ GS G    P RVFK  +MAGRMGG+++ V+NL+V+ 
Sbjct: 118 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGDKIKVQNLKVLK 177

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L++VKGCVPG  KN++++++
Sbjct: 178 VVAEKNLLVVKGCVPG-HKNAYVIIQ 202


>gi|320352917|ref|YP_004194256.1| 50S ribosomal protein L3P [Desulfobulbus propionicus DSM 2032]
 gi|320121419|gb|ADW16965.1| LSU ribosomal protein L3P [Desulfobulbus propionicus DSM 2032]
          Length = 210

 Score =  239 bits (610), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 85/208 (40%), Positives = 120/208 (57%), Gaps = 4/208 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
             G++ RKLGMT VY+  GR IPVTV+    C ++  +T++K GY A+QVG  E K   +
Sbjct: 4   TKGILGRKLGMTRVYDENGRSIPVTVIEAGPCTILQKKTVEKEGYNAIQVGFLEKKETRM 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGF 120
           +KP  G            + EFRV    D+  VG   +     ++G LVD++G + G+GF
Sbjct: 64  NKPEVGHCKRSGGKGFYYIKEFRVTNP-DVYEVGQQITVSEIVSIGDLVDISGKSKGRGF 122

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH F G R THG S  HR+ GS GC   P RV K KK+ GRMG   +T KNL ++
Sbjct: 123 QGVIKRHGFAGGRTTHG-SDFHRAPGSIGCSAWPSRVLKGKKLPGRMGNESMTQKNLRII 181

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
            + ++  ++LV+G VPGA KN  + +  
Sbjct: 182 DIRNEDNVLLVRGTVPGA-KNGLLNIYS 208


>gi|123966973|ref|YP_001012054.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9515]
 gi|166233178|sp|A2BYT6|RL3_PROM5 RecName: Full=50S ribosomal protein L3
 gi|123201339|gb|ABM72947.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9515]
          Length = 217

 Score =  239 bits (610), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 82/208 (39%), Positives = 129/208 (62%), Gaps = 3/208 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +G  +PVT++    C+V   +T   +GY A+Q+G G +K K+
Sbjct: 1   MSIGILGKKLGMSQLFDDDGNAVPVTLIEAGPCRVTQLKTQSLDGYTAIQIGYGVSKDKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SKP +G          K L EF+V+++     +G   + + F VGQ VD++G ++G+GF
Sbjct: 61  LSKPEKGHLLKSGKELLKHLKEFKVEENSS-YEIGKEITVTNFEVGQKVDISGKSMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRH F     +HG S +HR+ GSTG    PGR++  K+MAGR GG ++T K L VV
Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKKITTKGLLVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
            +DD++ L++VKG VPG    S + +R 
Sbjct: 179 KIDDQKNLLVVKGSVPGKP-GSIVNIRP 205


>gi|258648159|ref|ZP_05735628.1| 50S ribosomal protein L3 [Prevotella tannerae ATCC 51259]
 gi|260852040|gb|EEX71909.1| 50S ribosomal protein L3 [Prevotella tannerae ATCC 51259]
          Length = 206

 Score =  239 bits (610), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 81/205 (39%), Positives = 119/205 (58%), Gaps = 5/205 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ IP TV+ +  C V   ++++K GY AVQ+G  EAK KN + 
Sbjct: 3   GLLGKKIGMTSVFSADGKNIPCTVVEVGPCVVTQIKSVEKEGYNAVQLGFQEAKEKNTTA 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSG 122
           P+ G F     +PK+ L EF     D    +G   +    F   + VDV G + G GF G
Sbjct: 63  PLLGHFKKAGTTPKRHLAEF--TGFDKEFNLGDTITVADVFEGVEYVDVVGTSKGHGFQG 120

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            MKRH FGG  ++THG     R  G+ G    P +VFK  +MAG+MG  R T +NL+V+ 
Sbjct: 121 VMKRHGFGGVGQSTHGQDDRARKPGAIGACSYPAKVFKGMRMAGQMGNRRATNQNLKVIK 180

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           V  +  L+L+KG VPG  K S +++
Sbjct: 181 VIPEHNLLLLKGSVPGC-KGSIVII 204


>gi|328953158|ref|YP_004370492.1| 50S ribosomal protein L3 [Desulfobacca acetoxidans DSM 11109]
 gi|328453482|gb|AEB09311.1| 50S ribosomal protein L3 [Desulfobacca acetoxidans DSM 11109]
          Length = 208

 Score =  239 bits (610), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 78/204 (38%), Positives = 116/204 (56%), Gaps = 1/204 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RKLGMT +++ EG  +PVTV+    C +V  ++L  +GY AVQVG    ++  ++KP
Sbjct: 5   LLGRKLGMTRIFSAEGVALPVTVIEAGPCYIVQKKSLAADGYDAVQVGFIRKRLDKLTKP 64

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           ++G +         +  +    +    L VG     S F +G+ VDV G + G+GF+G +
Sbjct: 65  LQGHYEKHGFKSGFRFLKEFRLESISDLEVGQELDVSQFEIGERVDVVGFSKGRGFAGVI 124

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR  F     THG S+SHR+ GS G    P RVFK KK+ GRMG  RVT   LEVV V  
Sbjct: 125 KRWGFQRGPETHG-SMSHRAPGSIGASAYPSRVFKGKKLPGRMGNARVTTLTLEVVDVRP 183

Query: 185 KRGLILVKGCVPGAKKNSWILVRD 208
           +  L+++KG VPGA+    ++ + 
Sbjct: 184 ESNLLILKGAVPGARHGLLLIKKS 207


>gi|54293321|ref|YP_125736.1| 50S ribosomal protein L3 [Legionella pneumophila str. Lens]
 gi|81822454|sp|Q5WZL2|RL3_LEGPL RecName: Full=50S ribosomal protein L3
 gi|53753153|emb|CAH14600.1| 50S ribosomal subunit protein L3 [Legionella pneumophila str. Lens]
          Length = 216

 Score =  239 bits (610), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 93/217 (42%), Positives = 129/217 (59%), Gaps = 1/217 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  EG  +PV+V+ +   +V   +T   +GY AVQ+  G  K   
Sbjct: 1   MMIGLLGRKIGMTRVFTPEGVSVPVSVVEVHPNRVSQVKTAANDGYSAVQLTGGIKKSSK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VSKP+ G F+   +       EFR+  +D   P   +     FT GQ VDV+G+T GKGF
Sbjct: 61  VSKPVAGHFAKAQIDAGDMQVEFRIDSEDAFTPGQVISVADVFTAGQYVDVSGLTKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNF    A+HG S SHR  GS G  Q PGRVFK KKMAG MG  R T+++LE+V
Sbjct: 121 AGTVKRHNFRTQDASHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNARCTIQSLELV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
            VD +R L+L+KG +PGA   S + ++ + K     +
Sbjct: 181 KVDSERNLLLIKGAIPGAP-GSRVEIKPAVKKQARGE 216


>gi|126662264|ref|ZP_01733263.1| 50S ribosomal protein L3 [Flavobacteria bacterium BAL38]
 gi|126625643|gb|EAZ96332.1| 50S ribosomal protein L3 [Flavobacteria bacterium BAL38]
          Length = 205

 Score =  238 bits (609), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 87/206 (42%), Positives = 126/206 (61%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ RK+GMT +++  G+ IP TV+    C V   RT + +GY A+Q+G  +   K   
Sbjct: 2   SGLIGRKIGMTSIFDENGKNIPCTVIECGPCVVTQVRTNEVDGYSAIQLGFDDKAEKRSI 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F     + KKK+ EF+  +  +   +G V +   F  G+ VDV G++ GKGF G
Sbjct: 62  KAELGHFKKAGTAAKKKVVEFKGFE--EEYKLGDVIAVDLFAEGEFVDVLGVSKGKGFQG 119

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG  +ATHG     R+ GS G    P RVFK  +MAGRMGG+ VTV+NL V+ 
Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGGDNVTVQNLRVLK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L++VKGCVPG  KNS+++++
Sbjct: 180 VVGEKNLLVVKGCVPG-HKNSYVIIQ 204


>gi|114567841|ref|YP_754995.1| 50S ribosomal protein L3 [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122317284|sp|Q0AUI0|RL3_SYNWW RecName: Full=50S ribosomal protein L3
 gi|114338776|gb|ABI69624.1| LSU ribosomal protein L3P [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 212

 Score =  238 bits (609), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 85/210 (40%), Positives = 127/210 (60%), Gaps = 4/210 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           +  ++  K+GMT +++   + +PV+++    C V+  + ++ +GY ++QVG    K K  
Sbjct: 5   KKAIMGIKIGMTQIFDENDKAVPVSIIEAGPCTVLQKKKVESDGYESIQVGFYNLKEKLA 64

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP RG F   NV P + + EFR+   DD   VG   +   FT G LVDV G + GKGF+
Sbjct: 65  NKPARGHFKKANVKPLRYIKEFRIDNVDD-YDVGQEITADIFTTGDLVDVIGTSKGKGFA 123

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNF      HG S  HR  GS G +  P RVFK +K+ GR+GG RVTV+ L+VV 
Sbjct: 124 GGVKRHNFARGSMGHG-SKYHRRPGSLGAKG-PARVFKGRKLPGRLGGERVTVQGLKVVK 181

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V   R LIL+KG +PG K+  ++++++S K
Sbjct: 182 VYPDRNLILIKGSIPGPKRG-FVIIKNSVK 210


>gi|288818164|ref|YP_003432512.1| ribosomal protein L3 [Hydrogenobacter thermophilus TK-6]
 gi|288787564|dbj|BAI69311.1| ribosomal protein L3 [Hydrogenobacter thermophilus TK-6]
 gi|308751765|gb|ADO45248.1| 50S ribosomal protein L3 [Hydrogenobacter thermophilus TK-6]
          Length = 235

 Score =  238 bits (609), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 86/211 (40%), Positives = 131/211 (62%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+  +G  IPVT++ +    VV  ++++K+GY A+Q+GA  AK K+
Sbjct: 1   MAIGLIGKKVGMTRVFLKDGTAIPVTLIEIPPHTVVAIKSIEKDGYSALQLGAYSAKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119
           ++KP  G    V V   ++L EFRV  D     VG   +    F+ G+LVDV G++ G+G
Sbjct: 61  LTKPEMGHLQKVGVRLLRRLKEFRVD-DIAGYQVGQELTVADVFSPGELVDVVGISKGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKR +FGG   +HG    HR+ GS G R DPGRV+K+K+MAG  G  +V +++L V
Sbjct: 120 FTGTMKRWDFGGFPKSHG-HRYHRAVGSIGNRSDPGRVWKSKRMAGHYGAQKVRIQSLFV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           V +  ++ L+LVKG VPG      +L + + 
Sbjct: 179 VDIVPEKNLMLVKGSVPGPAGGLVVLEKSTI 209


>gi|32475058|ref|NP_868052.1| 50S ribosomal protein L3 [Rhodopirellula baltica SH 1]
 gi|42559597|sp|Q7UN20|RL3_RHOBA RecName: Full=50S ribosomal protein L3
 gi|32445598|emb|CAD75599.1| 50S ribosomal protein L3 [Rhodopirellula baltica SH 1]
          Length = 228

 Score =  238 bits (609), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 81/230 (35%), Positives = 123/230 (53%), Gaps = 23/230 (10%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ RK+GMT ++  +G  +PVTV+    C V+  R+ D++GY AVQ+G  +   + 
Sbjct: 1   MSPSILGRKIGMTQIFLEDGTAVPVTVVQAGPCHVLQVRSKDRDGYEAVQMGFEDKPRRL 60

Query: 61  VSKPMRGFFS-------------------SVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS 101
             +  RG  +                     +  P++ + EFR   + +   VG   +  
Sbjct: 61  AKRSERGQVATIESKRSKKRSAAGIEAPAKADCEPQRFVREFRGSSEAN---VGDTLTVE 117

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   + VD+TG + G+GF+G MKRHNF G RATHGV   HR  G TG    P R FK K
Sbjct: 118 QFNDVKKVDITGTSKGRGFAGVMKRHNFAGQRATHGVKKCHRHAGGTGMSASPSRTFKGK 177

Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +MAG+ G  +VT +NLEVV VD +  L++++G VPG     ++ +R + K
Sbjct: 178 RMAGQYGNAKVTTRNLEVVRVDAENNLLMIRGAVPGPN-GGFVSIRQTNK 226


>gi|110004229|emb|CAK98567.1| 50s ribosomal protein l3 [Spiroplasma citri]
          Length = 258

 Score =  238 bits (609), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 83/210 (39%), Positives = 131/210 (62%), Gaps = 6/210 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT ++  +GR IPVTV+ ++   V+   T ++NGY A+Q+   + ++  VS
Sbjct: 2   KGILGRKIGMTQIFATDGRLIPVTVVEVEPNVVLRVLTKEQNGYQALQLAVEDKRISLVS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP +G F   N +PK+ + E R   + D    G +     FT G+ VDVTG + GKGF+G
Sbjct: 62  KPDQGQFKKANTTPKRFVKEIR---NMDGYNPGDIIKADIFTAGEFVDVTGTSKGKGFTG 118

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           ++KRHN+      HG S  HR  GS G    P R+ K+KKM G MG  +VT++NLEV+++
Sbjct: 119 SIKRHNYSRGPMGHG-SGYHRGVGSMGAIA-PNRILKSKKMPGHMGTKKVTIQNLEVIAI 176

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D ++  +LVKG +PG KK  +++++++ K 
Sbjct: 177 DTEKNALLVKGSIPGPKK-QFVIIKEAIKG 205


>gi|114778824|ref|ZP_01453631.1| 50S ribosomal protein L3 [Mariprofundus ferrooxydans PV-1]
 gi|114550955|gb|EAU53519.1| 50S ribosomal protein L3 [Mariprofundus ferrooxydans PV-1]
          Length = 199

 Score =  238 bits (609), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 93/202 (46%), Positives = 126/202 (62%), Gaps = 3/202 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT ++  +G  I VTVL+++ C+VV  R+ DK+GY AVQVG G AK +N ++P++G ++ 
Sbjct: 1   MTQIFTADGSAIAVTVLNIEPCKVVARRSADKDGYDAVQVGFGAAK-RNTTRPVQGHYAR 59

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
                   L EFR+  D +   +G   + + F  GQ +DV+G + G GF+G MKR+NFGG
Sbjct: 60  QGQEVAGGLKEFRIAADAEF-ELGQELNATLFEAGQKIDVSGTSKGHGFAGVMKRYNFGG 118

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
            RATHG    HR  GSTG  Q PGRVF  KKM G  G  R T +NLEVV VD +   ILV
Sbjct: 119 GRATHGAEKVHRQMGSTGQCQWPGRVFPGKKMPGHFGNVRSTTQNLEVVRVDAEANRILV 178

Query: 192 KGCVPGAKKNSWILVRDSFKSA 213
           KG VPG+ +N  + +R + K A
Sbjct: 179 KGAVPGS-RNGLVELRPAVKGA 199


>gi|147799626|emb|CAN75145.1| hypothetical protein VITISV_033846 [Vitis vinifera]
          Length = 243

 Score =  238 bits (609), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 97/193 (50%), Positives = 128/193 (66%), Gaps = 1/193 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G +A K GM+ +++  G R+P+TVL LD+  V   +T +K G  A+QVG G+ K K++
Sbjct: 7   RTGAIAVKCGMSALWDKWGARVPITVLWLDDNIVSQVKTFEKEGXNALQVGCGQKKAKHL 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F +  V  K+KL EF V +D  LLPVG+     +F  GQ VDVTG+T GKGF 
Sbjct: 67  TKPEVGHFRAQGVPLKRKLREFPVTED-ALLPVGTTIGVRHFVPGQYVDVTGITRGKGFQ 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR  F G+ A+HG S+SHRS GSTG R  PG+VFK KKM GRMGG + TVKN+ V  
Sbjct: 126 GGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGKQRTVKNVWVYK 185

Query: 182 VDDKRGLILVKGC 194
           +D  R L+ V+G 
Sbjct: 186 IDPTRNLMWVRGQ 198


>gi|124023995|ref|YP_001018302.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9303]
 gi|166233177|sp|A2CC27|RL3_PROM3 RecName: Full=50S ribosomal protein L3
 gi|123964281|gb|ABM79037.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9303]
          Length = 218

 Score =  238 bits (609), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 82/211 (38%), Positives = 127/211 (60%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++ +GR IPVT++    C++   +T D +GY AVQ+G G+ + K 
Sbjct: 1   MSIGILGKKLGMSQFFDDQGRAIPVTLIEAGPCRITQLKTSDIDGYAAVQIGFGDTREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G  +       K L E+RV+  +  L +G+  +   F  GQ VDV+G T+G+GF
Sbjct: 61  INKPSKGHLTKSGEVLLKHLREYRVEGLEG-LELGAAITVGSFEAGQKVDVSGDTMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRH F     +HG S +HR  GSTG    PGR++  K+MAGR GG + T + L ++
Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKRTTRGLTIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            VD  R L++VKG VPG    + + +R + +
Sbjct: 179 KVDSNRNLLVVKGSVPGKP-GALLNIRPAKR 208


>gi|152964657|ref|YP_001360441.1| ribosomal protein L3 [Kineococcus radiotolerans SRS30216]
 gi|189042849|sp|A6W5T8|RL3_KINRD RecName: Full=50S ribosomal protein L3
 gi|151359174|gb|ABS02177.1| ribosomal protein L3 [Kineococcus radiotolerans SRS30216]
          Length = 219

 Score =  238 bits (609), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 86/212 (40%), Positives = 121/212 (57%), Gaps = 2/212 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           GV+  KLGMT +++ + R +PVTV+ ++   V   RT   +GY AVQ+       +  +K
Sbjct: 8   GVLGTKLGMTQLWDADNRIVPVTVVKVEPNVVTQIRTTTVDGYEAVQLATTAIAQRKATK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+P++ L E R     D   +G   +   F  G  VDV G T GKGF+G 
Sbjct: 68  PAAGHFEKAGVAPRRHLVELRTTDAAD-YSLGQEVTAEAFATGATVDVVGTTKGKGFAGV 126

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G+ A+HG   +HR  GS G    PGRVFK  +MAGRMG  R T +NL V +VD
Sbjct: 127 MKRHGFHGVGASHGAHRNHRKPGSIGGCATPGRVFKGMRMAGRMGAARQTTQNLTVQAVD 186

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            ++GL+L+ G +PG  +   +LV+ + K+ V 
Sbjct: 187 AEKGLLLITGAIPGP-RGGLVLVKSASKARVK 217


>gi|149919182|ref|ZP_01907665.1| 50S ribosomal protein L3 [Plesiocystis pacifica SIR-1]
 gi|149819896|gb|EDM79318.1| 50S ribosomal protein L3 [Plesiocystis pacifica SIR-1]
          Length = 223

 Score =  238 bits (609), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 102/217 (47%), Positives = 133/217 (61%), Gaps = 2/217 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GMT  Y  +G R+PVTVL      V  HRT++++GY A+Q+   + K   +S
Sbjct: 5   MGLLTKKIGMTEFYKEDGTRVPVTVLLAKGNVVTAHRTVERDGYTALQLAFDDQKASRLS 64

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           KP  G F    VSPK+K+ EFRV  D      VGS    S F+ GQLVDVTG + GKGF 
Sbjct: 65  KPKLGQFKKAEVSPKRKIKEFRVAADVVAQHAVGSEVDVSIFSDGQLVDVTGTSKGKGFQ 124

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH   G + THG    +R  GS GCR  PGRV   K+MAG+MG   VTV+NLEV  
Sbjct: 125 GVMKRHGMRGEKRTHGQHEVYRHGGSIGCRLTPGRVIPGKRMAGQMGNETVTVQNLEVAK 184

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           V   +GLILVKG +PG  KN ++ +R + K+A+  K 
Sbjct: 185 VIADKGLILVKGAIPGG-KNGYVQIRHAIKAAIRTKH 220


>gi|167518906|ref|XP_001743793.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777755|gb|EDQ91371.1| predicted protein [Monosiga brevicollis MX1]
          Length = 309

 Score =  238 bits (609), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 98/214 (45%), Positives = 143/214 (66%), Gaps = 2/214 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+ ++A+KLGMT  ++  G  IP+TVL +++CQVV HRT++++GY A+ +GA   K   +
Sbjct: 66  RAPLIAKKLGMTQTWDRWGTLIPMTVLQVEDCQVVGHRTIERDGYEALILGAETIKDSKL 125

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
              +RG F+   +  K+ + E R+  +  +LP+G   S  +F  GQLVDV G TIGKGF+
Sbjct: 126 DGRIRGQFAKHGLPSKRHMEEARISAE-AMLPIGYELSCEHFEPGQLVDVRGTTIGKGFA 184

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF G+ ATHGV+ +HR  G  G  QDPGRV+K K+ AGRMGG     +NL V+ 
Sbjct: 185 GVMKRHNFKGMPATHGVTKTHRRMGGFGGGQDPGRVWKGKRNAGRMGGVLRWQRNLAVIR 244

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           +D +  LI+V G +PGA+ NS +LVRD+  + ++
Sbjct: 245 IDTRYNLIMVAGSIPGAE-NSRVLVRDAIMNPLH 277


>gi|159904219|ref|YP_001551563.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9211]
 gi|226730549|sp|A9BCP7|RL3_PROM4 RecName: Full=50S ribosomal protein L3
 gi|159889395|gb|ABX09609.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9211]
          Length = 219

 Score =  238 bits (608), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 79/209 (37%), Positives = 126/209 (60%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++ +GR +PVT++    C++   ++L  +GY AVQ+G G  + K 
Sbjct: 1   MSIGILGKKLGMSQFFDDKGRSVPVTLIEAGPCRITQLKSLATDGYSAVQIGYGFTREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G  S       + L E+RV  D  +  +G+  +   F  GQ VDV+G ++G+GF
Sbjct: 61  VNKPFKGHLSKSGEGFLRHLHEYRVD-DLGVYELGAKITVGNFEAGQKVDVSGNSMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH+F     +HG S +HR  GSTG    PGR++  K+MAGR GG ++T + L ++
Sbjct: 120 AGYQKRHSFSRGPMSHG-SKNHRQPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLTIM 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            +D  R L++VKG VPG    S + +R +
Sbjct: 179 KIDSDRNLLVVKGSVPGKP-GSLLNIRPA 206


>gi|256830538|ref|YP_003159266.1| ribosomal protein L3 [Desulfomicrobium baculatum DSM 4028]
 gi|256579714|gb|ACU90850.1| ribosomal protein L3 [Desulfomicrobium baculatum DSM 4028]
          Length = 210

 Score =  238 bits (608), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 79/204 (38%), Positives = 115/204 (56%), Gaps = 1/204 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RK+GMT +Y  +G  IPVTV+    C V+  +  +K+GY A+QVG  E     ++K
Sbjct: 6   GIVGRKIGMTRIYGADGNVIPVTVIQAGPCPVIEKKVSEKDGYTAIQVGFEEVAAHRLTK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G     N    K L E R+    D   +G   +   FT G+ + VTG + G+GF+G 
Sbjct: 66  PEQGHQQKANCGFYKMLKEIRL-GSVDEYEIGQKLTVEMFTPGEKIRVTGTSKGRGFAGV 124

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           ++R NF G  A+HG    HR  GS G    P +VFK KKM G++G    T+ NLE+V V 
Sbjct: 125 IRRWNFSGAPASHGHEKVHRKPGSIGQCAWPSKVFKGKKMPGQLGNKTATMLNLEIVDVR 184

Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207
            +  ++LV+G VPG K+   +L +
Sbjct: 185 PEDNVVLVRGQVPGPKQGIVVLSK 208


>gi|255038089|ref|YP_003088710.1| 50S ribosomal protein L3 [Dyadobacter fermentans DSM 18053]
 gi|254950845|gb|ACT95545.1| ribosomal protein L3 [Dyadobacter fermentans DSM 18053]
          Length = 206

 Score =  238 bits (608), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 85/206 (41%), Positives = 126/206 (61%), Gaps = 5/206 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +YN +G+ +  TV+    C V   R+ +K+GY A+Q+G GE K KN S
Sbjct: 2   SGLIGKKIGMTSLYNADGQALACTVIQAGPCVVTQVRSEEKDGYKAIQLGFGEKKEKNTS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121
           +P+ G F   N +PK+KL EF+  + +    +G+  S    F  G+ VDV G   G+GF 
Sbjct: 62  QPLIGHFKKANTTPKQKLVEFK--EFEVEHELGTSLSVQDIFEEGEFVDVVGSAKGRGFQ 119

Query: 122 GAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           G +KRH FGG    THG     R  GS G    P RVFK  +M GRMG NRV ++NL ++
Sbjct: 120 GVVKRHGFGGVGGQTHGQHNRARHPGSIGACSFPSRVFKGIRMGGRMGNNRVKIQNLRIL 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
            V  ++ +++V G VPG+ KNS++++
Sbjct: 180 KVIPEQNILVVSGSVPGS-KNSFLII 204


>gi|299830598|ref|YP_003735046.1| 50S ribosomal protein L3 [Durinskia baltica]
 gi|297384962|gb|ADI40261.1| 50S ribosomal protein L3 [Durinskia baltica]
          Length = 207

 Score =  238 bits (608), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 121/206 (58%), Gaps = 2/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT +++  G  IPVT+L +  C V   +T  K+GY ++QVG      K+
Sbjct: 1   MSVGLLGNKIGMTQIFDETGNIIPVTILKVGPCVVTQVKTEAKDGYNSIQVGYSRVSSKS 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G     N+ P K L EFR+  D +   VG   +    ++GQ VD+ G TIGKGF
Sbjct: 61  LTQPELGHLQKSNIQPLKHLKEFRITNDQN-FEVGQTLNVDLLSLGQFVDIQGKTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRHNF     THG S +HR+ GS G    PGRV   K+M+G++G   +TVK L+V+
Sbjct: 120 TGLQKRHNFARGPMTHG-SKNHRAPGSIGMGTTPGRVLPGKRMSGQVGNKVITVKKLKVI 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
            ++ +  ++++KG VPG   N   +V
Sbjct: 179 QLNLEENILVIKGSVPGKPGNLLSIV 204


>gi|312130549|ref|YP_003997889.1| lsu ribosomal protein l3p [Leadbetterella byssophila DSM 17132]
 gi|311907095|gb|ADQ17536.1| LSU ribosomal protein L3P [Leadbetterella byssophila DSM 17132]
          Length = 205

 Score =  238 bits (608), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 85/206 (41%), Positives = 123/206 (59%), Gaps = 6/206 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT ++N  G  +P TV+    C V   RT + +GY A+Q+G GE K K  +
Sbjct: 2   SGIIGKKIGMTTIFN-NGAAVPCTVIEAGPCVVTQVRTEETDGYNAIQLGFGEKKEKRTT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121
           K + G F   N +PK+KL EF+  + +    +G        F  G+ VDV+G T GKGF 
Sbjct: 61  KALLGHFKKANTTPKRKLVEFK--EFEKEFALGDTIKVEDVFVEGEFVDVSGNTKGKGFQ 118

Query: 122 GAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           G +KRH FGG  ++THG     R+ GS G    P RVFK  +MAGRMG  +VT++NL+V+
Sbjct: 119 GVVKRHGFGGVGQSTHGQHNRLRAPGSIGACSYPARVFKGLRMAGRMGNTKVTIQNLQVL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
            +  ++ LI+V G VPG  KN  + +
Sbjct: 179 KLFPEKNLIIVSGSVPGG-KNGIVTL 203


>gi|289449936|ref|YP_003475784.1| 50S ribosomal protein L3 [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289184483|gb|ADC90908.1| 50S ribosomal protein L3 [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 211

 Score =  238 bits (608), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 87/213 (40%), Positives = 127/213 (59%), Gaps = 4/213 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ RK GMT +++  G  +PVTV+     QVV  +T++ +GY AV+VG  + K   
Sbjct: 1   MEKFMLGRKAGMTQLFDENGVAVPVTVIECGPVQVVQKKTVEVDGYSAVKVGFADKKETA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119
           V+KP  G F    +SPK+ L EF V ++++    G       +F VG  VDV+G++ GKG
Sbjct: 61  VNKPDLGQFKKAGISPKRFLKEFVVAENNE-FAAGQELKVSDFFAVGDRVDVSGVSKGKG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           + G +KRH   G    HG S  HR  GS G    PGRVFK KKM G+MG   VTV+NL+V
Sbjct: 120 YQGNVKRHGQKGGPQAHG-SKYHRRVGSMGPNTWPGRVFKGKKMPGQMGNVNVTVQNLDV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD +R +I +KG VPG  +  ++ ++++ K+
Sbjct: 179 VLVDGERNIIALKGAVPGP-RGGYLSIKETVKA 210


>gi|217967369|ref|YP_002352875.1| ribosomal protein L3 [Dictyoglomus turgidum DSM 6724]
 gi|217336468|gb|ACK42261.1| ribosomal protein L3 [Dictyoglomus turgidum DSM 6724]
          Length = 215

 Score =  238 bits (608), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 116/211 (54%), Gaps = 4/211 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
              ++ RK+GMT ++   G  +PVTV+    C V+  RT +K+GY A+Q+G    K   +
Sbjct: 6   TKAILGRKIGMTQIFTENGEMVPVTVIRGGPCLVLNVRTKEKDGYDAIQLGFERCKESKL 65

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F  + + P + + E RV+   D    G       F  G+ VD+TG + G GF+
Sbjct: 66  NKPQLGIFKKLGLPPFRIIKEVRVKNPLDYTK-GQEIRVDIFQEGEFVDITGKSKGHGFT 124

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR NF   R +HG S  HR   S G       V K +KMAGR G   +TV+NL++V 
Sbjct: 125 GHIKRWNFSRGRMSHG-SKFHRRRASIGAGG-VQHVMKGQKMAGRWGNETITVQNLKIVK 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VD ++ LILVKG VPG   N  +++R + K 
Sbjct: 183 VDKEKDLILVKGAVPGPTGN-LLIIRKAVKK 212


>gi|260061897|ref|YP_003194977.1| 50S ribosomal protein L3 [Robiginitalea biformata HTCC2501]
 gi|88786030|gb|EAR17199.1| 50S ribosomal protein L3 [Robiginitalea biformata HTCC2501]
          Length = 196

 Score =  238 bits (608), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 81/196 (41%), Positives = 116/196 (59%), Gaps = 3/196 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT +++  G+ IP TV+    C V   RT + +GY A+Q+G  +   K  +K   G F  
Sbjct: 1   MTSIFDENGKNIPCTVIEAGPCVVTQVRTEEVDGYNALQLGFDDKADKRANKAENGHFKK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
              +PKKK+ EFR  ++     +G   +   F  G+ VDV G++ GKGF G +KRH FGG
Sbjct: 61  AGTAPKKKVVEFRYFEE-GAFKLGDTINVELFKEGEFVDVNGISKGKGFQGVVKRHGFGG 119

Query: 132 -LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
             ++THG     R+ GS G   DP RVFK  KMAG+MG  RVTV+NL V+ V  ++ L++
Sbjct: 120 VGQSTHGQHNRLRAPGSIGAASDPSRVFKGMKMAGQMGNQRVTVQNLRVLKVVPEKNLLV 179

Query: 191 VKGCVPGAKKNSWILV 206
           +KG VPG  KN++I +
Sbjct: 180 LKGAVPG-HKNAYITI 194


>gi|11465780|ref|NP_053924.1| ribosomal protein L3 [Porphyra purpurea]
 gi|1710474|sp|P51314|RK3_PORPU RecName: Full=50S ribosomal protein L3, chloroplastic
 gi|1276780|gb|AAC08200.1| 50S ribosomal protein L3 [Porphyra purpurea]
          Length = 205

 Score =  238 bits (608), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 84/206 (40%), Positives = 125/206 (60%), Gaps = 3/206 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT  ++  G  IPVTV+ +  C +   +++  +GY A+QVG  +   + 
Sbjct: 1   MSVGILGTKVGMTQFFDETGLSIPVTVIQVGPCVITQIKSMSTDGYNAIQVGYKQVVEQK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SKP+ G        P K L E+ V+  +D   V  VFS + F VGQ V+V+  +IGKGF
Sbjct: 61  LSKPLLGHLKKSQSPPLKYLREYLVESIEDF-EVSQVFSTNIFEVGQKVNVSSKSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRH+F     +HG S +HR  GS G    PGRV+  K MAG+MG  +VT+KNL++V
Sbjct: 120 SGYQKRHHFSRGPMSHG-SKNHRQPGSIGAGTTPGRVYPGKNMAGQMGNKKVTIKNLQIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
           S++ +  L+L+KG VPG K+ + + V
Sbjct: 179 SINIENDLLLLKGAVPG-KQGALVKV 203


>gi|296105878|ref|YP_003617578.1| large subunit ribosomal protein L3 [Legionella pneumophila 2300/99
           Alcoy]
 gi|295647779|gb|ADG23626.1| large subunit ribosomal protein L3 [Legionella pneumophila 2300/99
           Alcoy]
 gi|307609138|emb|CBW98585.1| 50S ribosomal subunit protein L3 [Legionella pneumophila 130b]
          Length = 215

 Score =  238 bits (607), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 92/215 (42%), Positives = 128/215 (59%), Gaps = 1/215 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT V+  EG  +PV+V+ +   +V   +T   +GY AVQ+  G  K   VS
Sbjct: 2   IGLLGRKIGMTRVFTPEGVSVPVSVVEVQPNRVSQVKTAANDGYSAVQLTGGTKKSSKVS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ G F+   +       EFR+  +D   P   +     FT GQ VDV+G+T GKGF+G
Sbjct: 62  KPVAGHFAKAQIDAGDMQVEFRIDSEDAFTPGQVISVADVFTAGQYVDVSGLTKGKGFAG 121

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHNF    A+HG S SHR  GS G  Q PGRVFK KKMAG MG  R T+++LE+V V
Sbjct: 122 TVKRHNFRTQDASHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNARCTIQSLELVKV 181

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           D +R L+L+KG +PGA   S + ++ + K     +
Sbjct: 182 DSERNLLLIKGAIPGAP-GSRVEIKPAVKKQARGE 215


>gi|218961433|ref|YP_001741208.1| 50S ribosomal subunit protein L3 [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730090|emb|CAO81002.1| 50S ribosomal subunit protein L3 [Candidatus Cloacamonas
           acidaminovorans]
          Length = 210

 Score =  238 bits (607), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 84/206 (40%), Positives = 121/206 (58%), Gaps = 3/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GMT V++ +G+ IPVTV+    C+V+  RT  +NGY A+Q+G  E   + VS
Sbjct: 2   IGLIGKKIGMTQVFDSDGKVIPVTVIKAGPCKVICKRTEAENGYEAIQIGYEEIPARKVS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPV--GSVFSPSYFTVGQLVDVTGMTIGKGF 120
           KP++G F   N    + + EFR      +  V  G       F   + V V+  + G+GF
Sbjct: 62  KPLQGHFKKYNSPFYRYVREFRPSYGQHIESVQIGDELKADIFGENETVSVSANSKGRGF 121

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNFGG  ++HG   S R  GS G    P RVFK  KMAG+ G  +VTV +L+V+
Sbjct: 122 TGVMKRHNFGGFISSHGSHESFRGPGSIGQCAQPSRVFKGMKMAGQYGNTKVTVHHLKVI 181

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
            VD +  LI+VKG VPG  +NS + +
Sbjct: 182 KVDPENNLIMVKGAVPG-HRNSLVTI 206


>gi|187734815|ref|YP_001876927.1| ribosomal protein L3 [Akkermansia muciniphila ATCC BAA-835]
 gi|226725123|sp|B2UMU0|RL3_AKKM8 RecName: Full=50S ribosomal protein L3
 gi|187424867|gb|ACD04146.1| ribosomal protein L3 [Akkermansia muciniphila ATCC BAA-835]
          Length = 211

 Score =  237 bits (606), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 3/213 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++ +K+GMT +++   G  +PVTV+ +        +T DK+GY A+QV     K  
Sbjct: 1   MALGLIGKKVGMTRLFDQESGAMVPVTVIDVKGNTFAQIKTEDKDGYNAIQVAFDAQKES 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            V+KP  G F  + + P K L EFRV+  +             F+ GQ VDV G + GKG
Sbjct: 61  RVAKPQAGHFKKLGIQPTKLLKEFRVEASELPAEGAKDPGVDLFSAGQWVDVIGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F GAM+RHNF G  A HG S+ HR  G  G    PGRV+KN+KM G+MG  + TV+NL+V
Sbjct: 121 FQGAMRRHNFHGSPAAHG-SMMHRRTGGVGGCSTPGRVWKNQKMPGQMGNAKRTVQNLKV 179

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V+V  +  +IL+ G VPGA + S++++R + K 
Sbjct: 180 VAVRPEDNVILISGAVPGA-RGSYLVIRPAKKK 211


>gi|90994504|ref|YP_536994.1| ribosomal protein L3 [Porphyra yezoensis]
 gi|109893085|sp|Q1XDH4|RK3_PORYE RecName: Full=50S ribosomal protein L3, chloroplastic
 gi|90819068|dbj|BAE92437.1| 50S ribosomal protein L3 [Porphyra yezoensis]
          Length = 205

 Score =  237 bits (606), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 76/206 (36%), Positives = 120/206 (58%), Gaps = 3/206 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT  ++  G  IPVTV+ +  C +   + +  +GY A+QVG  +   + 
Sbjct: 1   MSVGILGTKVGMTQFFDEAGLSIPVTVIQVGPCVITQIKAVSTDGYNAIQVGYKQVAEQK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+ G        P K L E+ ++  DD   V  + S   F VGQ ++V+  ++GKGF
Sbjct: 61  LNKPLLGHLKKSQAPPLKYLREYEMKSTDD-FEVSQILSTDLFQVGQKINVSSRSVGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRH+F     +HG S +HR  GS G    PGRV+  K MAG++G  +VT+KNL++V
Sbjct: 120 SGYQKRHHFSRGPMSHG-SKNHRQPGSIGAGTTPGRVYPGKNMAGQLGNKKVTIKNLQIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
           S++ +  L++VKG VPG    + + +
Sbjct: 179 SINSENDLLIVKGAVPGKP-GALVKI 203


>gi|53715466|ref|YP_101458.1| 50S ribosomal protein L3 [Bacteroides fragilis YCH46]
 gi|60683438|ref|YP_213582.1| 50S ribosomal protein L3 [Bacteroides fragilis NCTC 9343]
 gi|253566670|ref|ZP_04844123.1| 50S ribosomal protein L3 [Bacteroides sp. 3_2_5]
 gi|255011646|ref|ZP_05283772.1| 50S ribosomal protein L3 [Bacteroides fragilis 3_1_12]
 gi|265767548|ref|ZP_06095214.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_16]
 gi|313149482|ref|ZP_07811675.1| 50S ribosomal protein L3 [Bacteroides fragilis 3_1_12]
 gi|81313514|sp|Q5L8A9|RL3_BACFN RecName: Full=50S ribosomal protein L3
 gi|81824898|sp|Q64NK8|RL3_BACFR RecName: Full=50S ribosomal protein L3
 gi|52218331|dbj|BAD50924.1| 50S ribosomal protein L3 [Bacteroides fragilis YCH46]
 gi|60494872|emb|CAH09679.1| putative 50S ribosomal protein L3 [Bacteroides fragilis NCTC 9343]
 gi|251944842|gb|EES85317.1| 50S ribosomal protein L3 [Bacteroides sp. 3_2_5]
 gi|263252853|gb|EEZ24365.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_16]
 gi|301164923|emb|CBW24484.1| putative 50S ribosomal protein L3 [Bacteroides fragilis 638R]
 gi|313138249|gb|EFR55609.1| 50S ribosomal protein L3 [Bacteroides fragilis 3_1_12]
          Length = 205

 Score =  237 bits (606), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 84/204 (41%), Positives = 127/204 (62%), Gaps = 4/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PK+ L EF+  + ++ L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKRHLAEFK--EFENELNLGDTVTVELFDGADYVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  ++THG     R  GS G    P +VFK  +M G+MGG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQSTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTVQNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
             +  L+L+KG VPG  K S +L+
Sbjct: 181 IAEHNLLLIKGSVPGC-KGSIVLI 203


>gi|116493163|ref|YP_804898.1| 50S ribosomal protein L3P [Pediococcus pentosaceus ATCC 25745]
 gi|122265373|sp|Q03EB6|RL3_PEDPA RecName: Full=50S ribosomal protein L3
 gi|116103313|gb|ABJ68456.1| LSU ribosomal protein L3P [Pediococcus pentosaceus ATCC 25745]
          Length = 210

 Score =  237 bits (606), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 121/211 (57%), Gaps = 5/211 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
             G++ +K+GMT V+   G  IPVTV+      V+  +T++ +GY +VQ+G  + +    
Sbjct: 3   TKGILGKKVGMTQVFTEAGELIPVTVIDTTPNVVLQLKTVENDGYSSVQLGFDDKRQVLS 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP +G  +  N +PK+ + E R  +  D + VG   +   F  G++VDVTG T G GF 
Sbjct: 63  NKPEQGHVAKANTNPKRFIHEIRNVELGD-VKVGDTIAADIFEAGEIVDVTGTTKGHGFQ 121

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +K+         HG S  HR  GS G      RVF  KK+ GRMG   VT+++LE+V 
Sbjct: 122 GVIKKDGQRRGPMAHG-SRYHRRPGSLGAV--INRVFPGKKLPGRMGNKTVTIQHLEIVK 178

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            D +  ++LVKG VPGAKK S+++V+ + K+
Sbjct: 179 ADTENNVLLVKGNVPGAKK-SYLVVKSTVKN 208


>gi|110639535|ref|YP_679744.1| 50S ribosomal protein L3 [Cytophaga hutchinsonii ATCC 33406]
 gi|123163229|sp|Q11QB2|RL3_CYTH3 RecName: Full=50S ribosomal protein L3
 gi|110282216|gb|ABG60402.1| LSU ribosomal protein L3P [Cytophaga hutchinsonii ATCC 33406]
          Length = 206

 Score =  237 bits (606), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 85/206 (41%), Positives = 124/206 (60%), Gaps = 5/206 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT VY+  G  +P TV+    C +   +T++ +GY AVQ+   + K K+ +
Sbjct: 2   SGIIGKKVGMTSVYDAVGNYVPCTVIEAGPCVITQIKTVETDGYKAVQLAFDDKKEKSTT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121
           KP+ G F    VSPK+KL EF+  +++  L +G   +    F  G  VDV G   G+GF 
Sbjct: 62  KPLLGHFKKAGVSPKRKLVEFKGFENE--LTLGQSLAAQDVFVEGDFVDVVGTAKGRGFQ 119

Query: 122 GAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           G +KRH FGG    THG     R  GS G    P RVFK  +MAGRMG NRV ++NL+++
Sbjct: 120 GVVKRHGFGGVGGQTHGQHNRARHAGSIGACSFPARVFKGTRMAGRMGNNRVKIQNLQIL 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
            V  +  L++V G VPG+ KNS++L+
Sbjct: 180 KVYPEHNLLVVSGSVPGS-KNSYVLI 204


>gi|119188359|ref|XP_001244786.1| hypothetical protein CIMG_04227 [Coccidioides immitis RS]
          Length = 298

 Score =  237 bits (606), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 99/215 (46%), Positives = 137/215 (63%), Gaps = 3/215 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GM+ V +   G+R   T+L LD  +V+ H+T  K+GY AVQVGAG     
Sbjct: 72  LRTGALAIKKGMSAVIDPETGKRTVCTILQLDRVEVISHKTRQKHGYFAVQVGAGWKHES 131

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV+KPM G F++  VSPK+ + EFRV+ +  LLPVG + +  +F  GQ VDV   + G G
Sbjct: 132 NVTKPMLGHFAANGVSPKRYVEEFRVRDEAGLLPVGQMINADWFQEGQFVDVRSKSRGMG 191

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKR  F G   +HGVS++HRS G+TG  Q  G RV+  KKMAG MG   VT++NL 
Sbjct: 192 FTGVMKRWGFHGQDRSHGVSLTHRSLGTTGPSQGGGSRVYPGKKMAGNMGNTPVTIQNLR 251

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V+ VD ++GL++VKG V G  K   + + D+ K  
Sbjct: 252 VLQVDPEKGLVVVKGSV-GGPKGRCVKIHDAIKKP 285


>gi|116624202|ref|YP_826358.1| 50S ribosomal protein L3P [Candidatus Solibacter usitatus
           Ellin6076]
 gi|122253082|sp|Q01W92|RL3_SOLUE RecName: Full=50S ribosomal protein L3
 gi|116227364|gb|ABJ86073.1| LSU ribosomal protein L3P [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 210

 Score =  237 bits (606), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 81/212 (38%), Positives = 119/212 (56%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVK 59
           M  G++ +K+GMT ++  +G+ +PVT+L    C VV  +T   +GY AVQ+G  E  K +
Sbjct: 1   MSPGILGKKIGMTQIFRPDGQVVPVTLLKAGPCMVVQRKTPSTDGYDAVQLGLVEFIKPQ 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++KP  G      V   K + EF +    D L  G       F     VDV G++ GKG
Sbjct: 61  RINKPTAGRLKKAGVEGAKFMREFTLGPGSDDLKTGDQVLVDQFKPKDKVDVVGISKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KRH+F G   +HG S+ HR+ GS G    P RV    +M G +G  +VTV+NLEV
Sbjct: 121 FAGVVKRHHFRGGEGSHG-SMFHRAPGSIGASSFPSRVVPGMRMGGHLGNAQVTVRNLEV 179

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           + VD +  +++VKG VPG     ++LVR S +
Sbjct: 180 IDVDTEDNVLVVKGAVPGPN-GGYVLVRRSKR 210


>gi|300088197|ref|YP_003758719.1| 50S ribosomal protein L3 [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527930|gb|ADJ26398.1| 50S ribosomal protein L3 [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 207

 Score =  237 bits (606), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 91/201 (45%), Positives = 124/201 (61%), Gaps = 5/201 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M +G++ +KLGMT VY+ EG+  PVTVL +  C VV  +T +++GY A Q+G GE K   
Sbjct: 1   MINGIIGKKLGMTQVYSTEGKMEPVTVLQVGPCTVVQVKTPERDGYTAAQLGFGEDK--K 58

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++K  +G          + L EFR+  D D + VG+    S F  G+ VDVTG++ G+GF
Sbjct: 59  LTKAEQGHVKEYGN--FRHLREFRLD-DLDGVEVGARVDASLFVDGERVDVTGISKGRGF 115

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH F G   THG S  HR+ GS G    PGRVFK  +MAG MG  +VTV  L+VV
Sbjct: 116 AGTVKRHGFAGGPKTHGQSDRHRAPGSIGATTTPGRVFKGTRMAGHMGNEQVTVSGLKVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKN 201
             D ++ L+LVKG VPGA+  
Sbjct: 176 KTDVEKNLLLVKGAVPGARNG 196


>gi|330814199|ref|YP_004358438.1| LSU ribosomal protein L3p (L3e) [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327487294|gb|AEA81699.1| LSU ribosomal protein L3p (L3e) [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 272

 Score =  237 bits (605), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 97/212 (45%), Positives = 137/212 (64%), Gaps = 2/212 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR G+V +K+GMT  +   G  +PVTVL ++  ++V     DK GY A+ VG G  K   
Sbjct: 1   MRLGLVGKKIGMTQKFYESGEAVPVTVLQVEPGKIVEVIEKDKRGYSALLVGYGHIKSSK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++K M+GF++  ++  KK L E+RV+  ++    GS  +       + VD+   TIGKGF
Sbjct: 61  LTKSMKGFYAKKSLEAKKFLKEYRVENTEEF-KAGSDVTLDILKDKKYVDIRSKTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR NFGGLRATHGVS+SHRSHGSTG RQDPG+VFK KKMAG MG    T++ LE+V
Sbjct: 120 AGVMKRWNFGGLRATHGVSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDKFRTMQGLEIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
             D    L+ ++G VPG+ KN+++ + ++ K 
Sbjct: 180 EADLVNNLLYLRGSVPGS-KNAYVEITEAVKK 210


>gi|261415819|ref|YP_003249502.1| 50S ribosomal protein L3 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372275|gb|ACX75020.1| 50S ribosomal protein L3 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302326929|gb|ADL26130.1| ribosomal protein L3 [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 205

 Score =  237 bits (605), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 92/204 (45%), Positives = 125/204 (61%), Gaps = 3/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++A+KLGMT V+  +G  +PVTVL    C VV H+T +K+GY AVQ+G G  K +  +K
Sbjct: 3   GILAKKLGMTQVFTEQGECVPVTVLEAGPCVVVCHKTEEKDGYTAVQIGFGLKKEQRANK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
              G F   +V+ ++ L EF V  D +  PVG  F  + F   + V+V+G++ G GFSG 
Sbjct: 63  AEVGHFKKADVAVREHLAEFDV-ADLESWPVGKEFGAADFADAKTVNVSGISKGHGFSGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KRH F     +HG   + R  G T     PGRVF  K+MAG+ G  +VTVK+L+VV VD
Sbjct: 122 IKRHGFHSGPRSHGTH-NMREPGGTSAHSYPGRVFPGKRMAGQYGNKKVTVKHLQVVKVD 180

Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207
             R LI V+G VPG  KNS I+VR
Sbjct: 181 GDRNLIFVRGAVPGP-KNSIIVVR 203


>gi|212550451|ref|YP_002308768.1| 50S ribosomal protein L3 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|226725128|sp|B6YQ85|RL3_AZOPC RecName: Full=50S ribosomal protein L3
 gi|212548689|dbj|BAG83357.1| 50S ribosomal protein L3 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 204

 Score =  237 bits (605), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 88/205 (42%), Positives = 127/205 (61%), Gaps = 5/205 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++++EG+ +P TV+ +  C V   +T+DK+GY AVQVG  + K K+ +K
Sbjct: 3   GLIGKKIGMTSIFSVEGKNLPCTVMEVGPCVVTQVKTVDKDGYEAVQVGFEDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P RG F    VS K+ L EF   K+      G V +  +F  G  VDV G++ GKGF G 
Sbjct: 63  PERGHFKRAGVSFKRYLAEF---KEQGKYKEGDVITVDFFNKGIYVDVVGISKGKGFQGV 119

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH F G   AT G S   R  GS G    P +VFK  +MAG+MG  +VT++NLEV+ +
Sbjct: 120 VKRHGFRGVGEATLGQSDRQRHPGSIGACSYPAKVFKGTRMAGQMGNTKVTIQNLEVIEL 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             K  L++VKG VPG+ K S ++V+
Sbjct: 180 ISKYNLLIVKGSVPGS-KGSILIVK 203


>gi|118411190|ref|YP_874584.1| 50S ribosomal protein L3 [Thalassiosira pseudonana]
 gi|125987628|sp|A0T0X2|RK3_THAPS RecName: Full=50S ribosomal protein L3, chloroplastic
 gi|116739937|gb|ABK20807.1| 50S ribosomal protein L3 [Thalassiosira pseudonana]
          Length = 207

 Score =  237 bits (605), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 82/206 (39%), Positives = 118/206 (57%), Gaps = 2/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT +++  G  IPVT+L +  C +   +T   +GY A+QVG G    K 
Sbjct: 1   MSLGLLGNKIGMTQIFDESGNIIPVTILKVGPCVITQVKTTLNDGYNAIQVGYGNVSTKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G     N+ P K L EF V  D     VG + +   F  GQL++VTG +IGKGF
Sbjct: 61  LTQPQLGHLQKSNIQPLKYLKEFHVS-DPTEFNVGQILNVESFVAGQLINVTGKSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KR+NF     THG S +HR+ GS G    PGRV   KKMAG++G     +K L++V
Sbjct: 120 SGLQKRYNFARGPMTHG-SKNHRAPGSIGMGTSPGRVLPGKKMAGQLGNKTANIKKLKIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
            V++   +++VKG VPG   N   ++
Sbjct: 179 QVNNDENILVVKGAVPGKPGNLLSII 204


>gi|182412051|ref|YP_001817117.1| ribosomal protein L3 [Opitutus terrae PB90-1]
 gi|177839265|gb|ACB73517.1| ribosomal protein L3 [Opitutus terrae PB90-1]
          Length = 216

 Score =  237 bits (605), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 85/218 (38%), Positives = 124/218 (56%), Gaps = 2/218 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M S ++ +K+GMT VY+ +   +PVTV+    C VV  +T + +GY AVQ+G  + K KN
Sbjct: 1   MISSLLGKKIGMTQVYDAQNVLVPVTVVEAGPCAVVQVKTTETDGYNAVQIGFEQKKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S   +   +  +++   ++      +    L VG V + + F  GQLVDV G+T GKGF
Sbjct: 61  ASLAEKNHAAKASLADAPRVLSEVRLEAAPTLKVGDVVNVTAFAEGQLVDVIGVTKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR    G  A+HG S+ HR  GS G RQ PGR +KN+ M G MG  + TV+NL VV
Sbjct: 121 QGVVKRFRVAGGPASHG-SMFHRRIGSIGMRQTPGRTWKNQAMPGHMGQLKRTVQNLRVV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
            +  ++ LILVKG +PGA     ++VR + K     + 
Sbjct: 180 KIIPEKNLILVKGAIPGAN-GDDVIVRSAIKGQKPAQA 216


>gi|315320564|ref|YP_004072621.1| 50S ribosomal protein L3 [Thalassiosira oceanica CCMP1005]
 gi|283569037|gb|ADB27574.1| 50S ribosomal protein L3 [Thalassiosira oceanica CCMP1005]
          Length = 207

 Score =  237 bits (605), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 87/206 (42%), Positives = 122/206 (59%), Gaps = 2/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT +++  G  IPVT+L +  C V   +T   +GY A+QVG G    K+
Sbjct: 1   MSLGLLGNKIGMTQIFDESGNIIPVTILKVGPCIVTQVKTTLNDGYNAIQVGYGNVSTKS 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G     N+ P K L EFRV +  D   VG V +   F  GQL++VTG +IGKGF
Sbjct: 61  LTQPQLGHLQKSNIQPLKYLKEFRVNEPAD-FSVGQVLNVDSFIEGQLINVTGKSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KR+NF     THG S +HR+ GS G   DPGRV   KKMAG++G     +K L++V
Sbjct: 120 SGLQKRYNFSRGPMTHG-SKNHRAPGSIGMGTDPGRVLPGKKMAGQLGNKMTNIKKLKIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
            V++   +++VKG VPG   N   +V
Sbjct: 179 QVNNNENILVVKGAVPGKPGNLLSIV 204


>gi|332182016|gb|AEE17704.1| 50S ribosomal protein L3 [Treponema brennaborense DSM 12168]
          Length = 206

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 88/210 (41%), Positives = 122/210 (58%), Gaps = 5/210 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++A K+GMT V++ +G   PVTV+ +D   VV  +T +  GY AV +G G+ K   +S
Sbjct: 2   KGLIATKVGMTQVFDEDGNLTPVTVIRVDPNVVVACKTKETFGYDAVVLGLGDLKNSQIS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    ++PK+ L EFR     + + VG       F     VDVT  + GKGF G
Sbjct: 62  KPYAGQFPE-GITPKRHLKEFR--DFSNEVAVGDQIGVELFENTNYVDVTATSKGKGFQG 118

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKR  F G RATHG S  HR  GSTG    PG  FKN KM G MG  R+TV+NL+V+ V
Sbjct: 119 VMKRWGFHGGRATHG-SKFHREAGSTGQCTSPGHSFKNIKMPGHMGCERITVQNLKVIKV 177

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +  +++V+G VPG  K+  ++++ + K 
Sbjct: 178 DPELKVVMVRGSVPG-NKDCTLIIKSAVKK 206


>gi|31981470|ref|NP_444389.2| 39S ribosomal protein L3, mitochondrial [Mus musculus]
 gi|17865553|sp|Q99N95|RM03_MOUSE RecName: Full=39S ribosomal protein L3, mitochondrial; Short=L3mt;
           Short=MRP-L3
 gi|13559357|dbj|BAB40838.1| mitochondrial ribosomal protein L3 (L3mt) [Mus musculus]
 gi|22028310|gb|AAH34877.1| Mitochondrial ribosomal protein L3 [Mus musculus]
 gi|26346775|dbj|BAC37036.1| unnamed protein product [Mus musculus]
 gi|74141933|dbj|BAE41032.1| unnamed protein product [Mus musculus]
 gi|74216950|dbj|BAE26589.1| unnamed protein product [Mus musculus]
 gi|148689151|gb|EDL21098.1| mitochondrial ribosomal protein L3, isoform CRA_c [Mus musculus]
          Length = 348

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 76/221 (34%), Positives = 112/221 (50%), Gaps = 5/221 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
            R G++A KLGM  ++  +G++  VT+L + +C V+ +   + +      +  G   V  
Sbjct: 95  FRVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKIAALTVGGKTVSR 154

Query: 61  VSKP--MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
             KP     F+  + + PK+    F V  D+ ++  G+    ++F  GQ VDVT  TIGK
Sbjct: 155 FYKPDSRLEFYRDLGLPPKQIHKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGK 213

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G MKR  F G  A+HG + +HR  G+     D  RV+   KM GRMG    TV  L+
Sbjct: 214 GFQGVMKRWGFKGQPASHGQTKTHRRPGAI-STGDIARVWPGTKMPGRMGNQNRTVYGLK 272

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           V  V+ K  +I V G VPG  KN  + ++DS   A     K
Sbjct: 273 VWRVNTKHNIIYVNGSVPG-HKNCLVKIKDSTLPAYKDSCK 312


>gi|15029810|gb|AAH11128.1| Mitochondrial ribosomal protein L3 [Mus musculus]
          Length = 348

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 76/221 (34%), Positives = 112/221 (50%), Gaps = 5/221 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
            R G++A KLGM  ++  +G++  VT+L + +C V+ +   + +      +  G   V  
Sbjct: 95  FRVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKIAALTVGGKTVSR 154

Query: 61  VSKP--MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
             KP     F+  + + PK+    F V  D+ ++  G+    ++F  GQ VDVT  TIGK
Sbjct: 155 FYKPDSRLEFYRDLGLPPKQIHKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGK 213

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G MKR  F G  A+HG + +HR  G+     D  RV+   KM GRMG    TV  L+
Sbjct: 214 GFQGVMKRWGFKGQPASHGQTKTHRRPGAI-STGDIARVWPGTKMPGRMGNQNRTVYGLK 272

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           V  V+ K  +I V G VPG  KN  + ++DS   A     K
Sbjct: 273 VWRVNTKHNIIYVNGSVPG-HKNCLVKIKDSTLPAYKDSCK 312


>gi|33241161|ref|NP_876103.1| 50S ribosomal protein L3 [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|42559600|sp|Q7V9W2|RL3_PROMA RecName: Full=50S ribosomal protein L3
 gi|33238691|gb|AAQ00756.1| Ribosomal protein L3 [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 219

 Score =  236 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 75/210 (35%), Positives = 123/210 (58%), Gaps = 3/210 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++ +GR IPVT++    C++   ++   +GY AVQ+  G  + K 
Sbjct: 1   MSIGILGKKLGMSQFFDEKGRSIPVTLVEAGPCRITQLKSSATDGYSAVQIAFGAVREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G  +       + + E+RV KD     +G+  +   F  GQ VDV+G ++G+GF
Sbjct: 61  INKPFQGHLAKSGDDLLRYMSEYRV-KDVGEFQLGAQITVGDFEEGQKVDVSGTSMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRH F     +HG S +HR  GSTG    PGR++  K+MAGR GG ++T + L ++
Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLMIM 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
            VD  + L+++KG +PG    S + +R + 
Sbjct: 179 KVDSDKNLLVIKGSLPGKP-GSLLNIRPAK 207


>gi|313158234|gb|EFR57636.1| 50S ribosomal protein L3 [Alistipes sp. HGB5]
          Length = 204

 Score =  236 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 83/205 (40%), Positives = 120/205 (58%), Gaps = 5/205 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT VY+ EG+ IP TV+    C V   +T++K+ Y AVQ+   E   K+ S
Sbjct: 2   SGLIGKKIGMTSVYSAEGKNIPCTVIEAGPCVVTQIKTVEKDTYEAVQIAYDEKSEKHTS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
             + G F     +PK+K+ EF+   +   + +G   +   F+    VDVTG++ GKGF G
Sbjct: 62  SSLLGHFKKAGTTPKRKMAEFKGMPE---VNLGDTLTVELFSEEDWVDVTGISKGKGFQG 118

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG    THG     R  GS G    P RVFK K++ G+MGG +V V NL V+ 
Sbjct: 119 VVKRHGFGGVGGQTHGQHNRQRKPGSLGASSYPSRVFKGKRLPGQMGGEQVKVLNLRVLK 178

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           V  +  LILVKG +PGA K +++ +
Sbjct: 179 VIPESNLILVKGSIPGA-KGAYLTI 202


>gi|120437174|ref|YP_862860.1| 50S ribosomal protein L3 [Gramella forsetii KT0803]
 gi|166233147|sp|A0M598|RL3_GRAFK RecName: Full=50S ribosomal protein L3
 gi|117579324|emb|CAL67793.1| 50S ribosomal protein L3 [Gramella forsetii KT0803]
          Length = 203

 Score =  236 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 83/205 (40%), Positives = 122/205 (59%), Gaps = 6/205 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C V   RT + +GY A+Q+G  + K   V 
Sbjct: 2   SGLIGKKIGMTSIFDENGKNIPCTVIQAGPCVVTQVRTKEVDGYEALQLGFDDKKT--VG 59

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G         K+K+ EF+   +D    +G   +  +F  G+ VD+ G + GKGF G
Sbjct: 60  KAAEGHAKKAGTVAKRKVVEFQGYNED--YKLGDSVTVEHFKEGEFVDIAGTSKGKGFQG 117

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG  +ATHG     R+ GS G    P RVFK  KMAGRMGG RV ++NL V+ 
Sbjct: 118 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGRMGGERVKIENLRVLK 177

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           V   + L+++KGCVPG+ KNS++++
Sbjct: 178 VVADKNLLVIKGCVPGS-KNSYVII 201


>gi|242620043|ref|YP_003002047.1| 50S ribosomal protein L3 [Aureococcus anophagefferens]
 gi|239997288|gb|ACS36811.1| 50S ribosomal protein L3 [Aureococcus anophagefferens]
          Length = 210

 Score =  236 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 82/201 (40%), Positives = 117/201 (58%), Gaps = 2/201 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT + +  G  +PVT+L    C V   +T++ +GY A Q+G  +   K 
Sbjct: 1   MPLGILGNKIGMTQIVDDLGNLVPVTILRAGPCTVTQIKTVETDGYSAAQLGYAQVTSKV 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP  G    V     + L E+++  D   L +G       F+ G +VDVTG +IGKGF
Sbjct: 61  LTKPQIGHLEKVGAPLLRYLHEYKIS-DTSELSLGQTIGVDIFSAGSVVDVTGKSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KR+NFG    THG S +HR+ GS G    PGRV+  KKMAG +G  +VT+K L+V+
Sbjct: 120 AGLQKRYNFGRGPMTHG-SKNHRAPGSIGAGTTPGRVYPGKKMAGHLGAKQVTIKKLKVL 178

Query: 181 SVDDKRGLILVKGCVPGAKKN 201
            VD +  LI+VKG VPG   N
Sbjct: 179 IVDAENNLIIVKGAVPGKPGN 199


>gi|47212780|emb|CAF95545.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 336

 Score =  236 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 80/217 (36%), Positives = 121/217 (55%), Gaps = 4/217 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59
           R G+VA KLGM  ++   G R  VT+L + +C V+ +   ++ +G+ A + VG   A   
Sbjct: 84  RVGLVAVKLGMAPIWTKAGERHVVTMLQVQDCHVIKYLPKEEYDGHTAALVVGGKNASPF 143

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             S+     F +  V PK+K+  F++  DD L+  G+    ++F  GQ VDVT  +IGKG
Sbjct: 144 YKSEQQMEMFRNAGVPPKQKITTFKIS-DDALIKPGTPLYAAHFRPGQYVDVTAKSIGKG 202

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR  F G  A+HG + +HR  G++G   DP +VFK KKM G MG   +T   L++
Sbjct: 203 FQGVMKRWGFKGQPASHGQTKTHRRPGASGPGGDPAKVFKGKKMPGMMGNIYITAFGLKI 262

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
             V+ K  ++ V G VPG  +N  + VRD+   + + 
Sbjct: 263 WRVNTKYNVLYVHGSVPG-HRNCLLKVRDTVLPSRSS 298


>gi|150020845|ref|YP_001306199.1| 50S ribosomal protein L3 [Thermosipho melanesiensis BI429]
 gi|166234604|sp|A6LLL3|RL3_THEM4 RecName: Full=50S ribosomal protein L3
 gi|149793366|gb|ABR30814.1| ribosomal protein L3 [Thermosipho melanesiensis BI429]
          Length = 205

 Score =  236 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 90/208 (43%), Positives = 125/208 (60%), Gaps = 6/208 (2%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RKLGMT V+  + + +PVTV+    C VV  +T++ +GY AVQ+G  EAK   V+KP
Sbjct: 4   IIGRKLGMTRVFVGD-KVVPVTVIKAGPCFVVQKKTIETDGYNAVQLGFEEAK--KVNKP 60

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M G F    V+P K L EFRV +D D   VG       F+ G  +D+TG + G+GF+GAM
Sbjct: 61  MEGVFKKAGVNPLKVLKEFRV-EDPDKFEVGQEIKVDIFSEGDKIDITGWSKGRGFAGAM 119

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR  F G   +HG    HR  GS G   +P R+FK KKM G+ G  RVT+ N E+V +D 
Sbjct: 120 KRWGFRGGPKSHGA-KFHRELGSVGQHSEPARIFKGKKMPGQYGNERVTILNSEIVKIDV 178

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +  LI VKG VPGA +   +L++ + + 
Sbjct: 179 ENNLIAVKGGVPGA-RGGLVLIKSAKRG 205


>gi|325104868|ref|YP_004274522.1| LSU ribosomal protein L3P [Pedobacter saltans DSM 12145]
 gi|324973716|gb|ADY52700.1| LSU ribosomal protein L3P [Pedobacter saltans DSM 12145]
          Length = 205

 Score =  236 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 83/205 (40%), Positives = 127/205 (61%), Gaps = 4/205 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++ EG+ IP TV+    C V   +T++ +GY AVQ+   E K KN +
Sbjct: 2   SGIIGKKVGMTSIFDAEGKNIPCTVIEAGPCVVTQVKTVETDGYAAVQLAYDEKKEKNTT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
             ++G F+    +PK+K+ EF+  + +    +G V   + F  G  VDV G + GKGF G
Sbjct: 62  AALKGHFAKAGTAPKRKMVEFKYFEVE--KTLGEVVDVTLFEEGDYVDVVGTSKGKGFQG 119

Query: 123 AMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG+   THG     R+ GS G    P RVFK  +MAGR GG+RV ++NL++V 
Sbjct: 120 VVKRHGFGGVGMQTHGQHNRMRAPGSLGASSFPSRVFKGMRMAGRTGGSRVKIQNLQIVK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           V  ++ L++V G +PGA K S++L+
Sbjct: 180 VFAEQNLLVVSGSIPGA-KGSYVLI 203


>gi|206890251|ref|YP_002249245.1| ribosomal protein L3 [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206742189|gb|ACI21246.1| ribosomal protein L3 [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 205

 Score =  236 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 89/202 (44%), Positives = 121/202 (59%), Gaps = 6/202 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVKNV 61
             ++ +K+GMT +++ EGR IPVTV+    C +V  R+ +KNGY AVQ+G  E  K KNV
Sbjct: 2   KAILGKKIGMTQIFDEEGRIIPVTVIEAGPCWIVQVRSKEKNGYEAVQLGFQEIKKEKNV 61

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP+ G F    + P + L EF++        VG   +   FT G +V + G++ GKG+ 
Sbjct: 62  PKPLLGIFKKAGIPPCRVLKEFKMTG----FNVGDKVTVEIFTKGDVVSIAGISKGKGYQ 117

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF G   THG S+ +R+ GS G    P RV+K K MAG MG  RVTVKNL +V 
Sbjct: 118 GVMKRHNFAGGPDTHG-SMFNRAPGSIGASSFPSRVWKGKGMAGHMGNERVTVKNLTIVD 176

Query: 182 VDDKRGLILVKGCVPGAKKNSW 203
           V  ++ L+LVKG VPG +    
Sbjct: 177 VIPEQNLLLVKGAVPGGENGIL 198


>gi|81829049|sp|Q6ME63|RL3_PARUW RecName: Full=50S ribosomal protein L3
 gi|46399687|emb|CAF23136.1| probable 50S ribosomal protein L3 [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 235

 Score =  236 bits (603), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 77/222 (34%), Positives = 114/222 (51%), Gaps = 10/222 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--- 57
           M   ++ +K GM  +++ +G  I  TV+  +   +   +T + +GY A+Q+G  +     
Sbjct: 15  MALTMMGKKRGMIQLFDEKGNAIVCTVIQAEPNVITQIKTKETDGYTALQLGFEKVTGKT 74

Query: 58  ----VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113
                    KP  G F    V  ++ L E R+   ++   +G   S   F   + VD T 
Sbjct: 75  QHTIEARTGKPRLGHFKKAGVESRRFLVESRLDSTEE-YTLGQEISVDTFNGIEFVDATA 133

Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
           ++ GKG+ G MKRHNF G  A+HG S  HR  GSTG R  PGR     K AG+MG  RVT
Sbjct: 134 ISKGKGYQGVMKRHNFAGGPASHG-SGHHRHAGSTGMRSTPGRGLPGGKKAGQMGNERVT 192

Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           V+NL +V VD +  +I+VKG VPG  +N  + +  + K A  
Sbjct: 193 VQNLRIVKVDSENHVIVVKGQVPGP-RNGLVYITQAKKLAKK 233


>gi|225158913|ref|ZP_03725227.1| ribosomal protein L3 [Opitutaceae bacterium TAV2]
 gi|224802531|gb|EEG20789.1| ribosomal protein L3 [Opitutaceae bacterium TAV2]
          Length = 215

 Score =  236 bits (603), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 81/215 (37%), Positives = 119/215 (55%), Gaps = 2/215 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M S ++ +K+GMT VY+ +   +PVTV+    C VV  +T + +GY AVQ+G    K KN
Sbjct: 1   MISTLLGKKIGMTQVYDAQNVLVPVTVVEAGPCPVVQVKTTETDGYNAVQLGFSVKKAKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
             K  +   +   +    ++       +   L  G V + + F  GQ+VDV G+T GKGF
Sbjct: 61  TPKAEQAHAAKAGLENTPRVLGEVRLNEAPTLKAGDVVTVAAFKEGQIVDVIGITKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G ++R    G  A+HG S+ HR  GS G RQ PGR +KN+KM G MG  + TV+NL +V
Sbjct: 121 QGVVRRFRVAGGPASHG-SMFHRRIGSIGMRQTPGRSWKNQKMPGHMGSQQRTVQNLTIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            +   + L+LVKG +PGA     ++VR + K    
Sbjct: 180 KILADKNLLLVKGAIPGAN-GDDVIVRTAIKGQPK 213


>gi|189501211|ref|YP_001960681.1| 50S ribosomal protein L3 [Chlorobium phaeobacteroides BS1]
 gi|226725147|sp|B3EP61|RL3_CHLPB RecName: Full=50S ribosomal protein L3
 gi|189496652|gb|ACE05200.1| ribosomal protein L3 [Chlorobium phaeobacteroides BS1]
          Length = 209

 Score =  236 bits (603), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 88/207 (42%), Positives = 119/207 (57%), Gaps = 1/207 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT +YN      P TV+    C V   +T + +GY A Q+  GE K   VSKP
Sbjct: 4   ILGKKIGMTSIYNANREAEPCTVIQAGPCFVSQVKTTENDGYEAYQLSIGERKEAKVSKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           +RG F+   ++P  K+ EF        L  GS  S   F+ G  V+V G++ GKGF+G +
Sbjct: 64  LRGHFAKAGIAPGYKVVEFGKDDMGLDLEQGSAVSVEIFSAGDAVEVQGVSKGKGFAGVV 123

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHNF G + THG S   R+ GS G   DP R FK  KM GRMGG  V VK LE+V V  
Sbjct: 124 KRHNFSGGQRTHGQSDRLRAPGSVGGASDPSRTFKGTKMGGRMGGKTVKVKGLEIVKVIP 183

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
           +  L+++KG VPG  KNS++ +  S K
Sbjct: 184 ESNLLVIKGSVPGV-KNSYVQIVSSKK 209


>gi|218440623|ref|YP_002378952.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 7424]
 gi|226725159|sp|B7KHY7|RL3_CYAP7 RecName: Full=50S ribosomal protein L3
 gi|218173351|gb|ACK72084.1| ribosomal protein L3 [Cyanothece sp. PCC 7424]
          Length = 212

 Score =  236 bits (603), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 89/211 (42%), Positives = 123/211 (58%), Gaps = 4/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT +++ E G  IPVTV+H   C +   +T   +GY ++Q+G GE K K
Sbjct: 1   MSVGILGTKLGMTQIFDKETGIAIPVTVIHAGPCPITQVKTPATDGYNSIQIGYGEVKEK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++KP  G       +P + L E+R++   D   +G       F  G LVDV G TIG+G
Sbjct: 61  ALNKPKLGHLKKSASTPVRHLKEYRLENAAD-YQLGDGIKVDLFKPGDLVDVAGKTIGRG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G  KRHNF     THG S +HR  GSTG    PGRV+  K+MAGR GG +VT++ L V
Sbjct: 120 FAGYQKRHNFKRGSMTHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGRYGGTQVTIRKLTV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           V +D +R LIL+KG VPG   N  + +  + 
Sbjct: 179 VQIDTERNLILIKGAVPGKPGN-LLSITPAK 208


>gi|303316364|ref|XP_003068184.1| 54S ribosomal protein L9, mitochondrial precursor, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|240107865|gb|EER26039.1| 54S ribosomal protein L9, mitochondrial precursor, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|320037921|gb|EFW19857.1| 50S ribosomal protein L3 [Coccidioides posadasii str. Silveira]
          Length = 291

 Score =  236 bits (603), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 98/215 (45%), Positives = 137/215 (63%), Gaps = 3/215 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GM+ V +   G+R   T+L LD  +V+ H+T  K+GY AVQVGAG     
Sbjct: 72  LRTGALAIKKGMSAVIDPETGKRTVCTILQLDRVEVISHKTRQKHGYFAVQVGAGWKHES 131

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV+KPM G F++  VSPK+ + EFRV+ +  LLP+G + +  +F  GQ VDV   + G G
Sbjct: 132 NVTKPMLGHFAANGVSPKRYVEEFRVRDEAGLLPIGQMINADWFQEGQFVDVRSKSRGMG 191

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKR  F G   +HGVS++HRS G+TG  Q  G RV+  KKMAG MG   VT++NL 
Sbjct: 192 FTGVMKRWGFHGQDRSHGVSLTHRSLGTTGPSQGGGSRVYPGKKMAGNMGNTPVTIQNLR 251

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V+ VD ++GL++VKG V G  K   + + D+ K  
Sbjct: 252 VLQVDPEKGLVVVKGSV-GGPKGRCVKIHDAIKKP 285


>gi|303246993|ref|ZP_07333269.1| 50S ribosomal protein L3 [Desulfovibrio fructosovorans JJ]
 gi|302491700|gb|EFL51583.1| 50S ribosomal protein L3 [Desulfovibrio fructosovorans JJ]
          Length = 210

 Score =  236 bits (602), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 87/204 (42%), Positives = 118/204 (57%), Gaps = 2/204 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT V+  +G  IPVTV+    C V   +T +K+GY A+Q+G      + V+K
Sbjct: 6   GILGRKLGMTRVFGDDGSIIPVTVIEAGPCPVTQVKTEEKDGYNAMQIGFDTIPERKVNK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G          + L E R         +G   +   F  G+ V +TG +IGKGF+G 
Sbjct: 66  PEKGHMDKAGRGYFRTLRELRCDGPAAF-ELGMDVTVDIFAPGETVKITGTSIGKGFAGV 124

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF GL+ THG   +HRS GS G   +PG+V K K+MAG MG   VTV  ++VV V 
Sbjct: 125 MKRHNFAGLKKTHGTEKAHRSGGSIGNNTEPGKVMKGKRMAGHMGARTVTVSGIQVVDVR 184

Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207
            +  LILVKG VPG  +N  ++VR
Sbjct: 185 PEMNLILVKGQVPGP-RNCVVMVR 207


>gi|242624269|ref|YP_003002187.1| 50S ribosomal protein L3 [Aureoumbra lagunensis]
 gi|239997377|gb|ACS36899.1| 50S ribosomal protein L3 [Aureoumbra lagunensis]
          Length = 208

 Score =  236 bits (602), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 85/201 (42%), Positives = 118/201 (58%), Gaps = 2/201 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT + +  G  +PVT+L    C V   +T++ +GY AVQVG  +   K 
Sbjct: 1   MPLGLLGNKIGMTQIVDERGNMVPVTILRAGPCIVTQIKTVEVDGYEAVQVGYNQVSSKF 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP  G    V V   + L E+R+    + + +G   S   F  G LVD+TG TIGKGF
Sbjct: 61  LTKPQIGHLEKVGVPLLRYLHEYRIDST-EQVTLGQTISVDMFKSGDLVDITGKTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRHNFG    THG S +HR+ GS G    PGRV+  KKMAG +G  +VT+K L+++
Sbjct: 120 AGLQKRHNFGRGPMTHG-SKNHRAPGSIGAGTTPGRVYPGKKMAGHLGAKKVTIKKLKIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKN 201
            VD +  LI+V G VPG   N
Sbjct: 179 FVDAENNLIVVLGSVPGKSGN 199


>gi|157363442|ref|YP_001470209.1| 50S ribosomal protein L3 [Thermotoga lettingae TMO]
 gi|166990942|sp|A8F4R1|RL3_THELT RecName: Full=50S ribosomal protein L3
 gi|157314046|gb|ABV33145.1| ribosomal protein L3 [Thermotoga lettingae TMO]
          Length = 210

 Score =  236 bits (602), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 82/206 (39%), Positives = 119/206 (57%), Gaps = 7/206 (3%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RK+GMT ++ I    IPVTV+    C VV  +    +GY A+QVG    K   V+KP
Sbjct: 4   ILGRKIGMTRLF-INDVSIPVTVVRAGPCYVVQKKNPQIDGYCAIQVGFEHLK--RVNKP 60

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           + G F    V P + L E R++ +++L    +G       F  G+ VD+TG T G+GFSG
Sbjct: 61  LEGHFKKAQVKPLRLLREIRLEDENELDSYEIGQEIKLDIFQPGEKVDITGWTKGRGFSG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR  F G    HG S  HR  GS G   +P ++FK KKM GR G  RVT+ NLEV+ +
Sbjct: 121 GIKRWGFSGGPRAHG-SKFHRELGSLGQHTEPAKIFKGKKMPGRYGNERVTIHNLEVIKI 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRD 208
           D +  L+++KG VPGA + S ++++ 
Sbjct: 180 DLENNLLVLKGSVPGA-RGSLVIIKS 204


>gi|261197061|ref|XP_002624933.1| 50S ribosomal protein L3 [Ajellomyces dermatitidis SLH14081]
 gi|239595563|gb|EEQ78144.1| 50S ribosomal protein L3 [Ajellomyces dermatitidis SLH14081]
 gi|239606530|gb|EEQ83517.1| 50S ribosomal protein L3 [Ajellomyces dermatitidis ER-3]
 gi|327356287|gb|EGE85144.1| 50S ribosomal protein L3 [Ajellomyces dermatitidis ATCC 18188]
          Length = 301

 Score =  236 bits (602), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 95/215 (44%), Positives = 136/215 (63%), Gaps = 3/215 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GMT +++   G+RIP TVL LD  QVV H+TL KNGY AVQVG G    +
Sbjct: 71  LRTGALAIKKGMTAIFDLETGKRIPCTVLQLDRVQVVAHKTLKKNGYYAVQVGCGWKHER 130

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            V++PM G F++  V+PK+ + EFRV+ ++ LLP+G   +  +F  GQ VD    + G G
Sbjct: 131 AVTRPMLGHFAANGVAPKRHIHEFRVKDENGLLPIGETINADWFQEGQYVDARSNSRGMG 190

Query: 120 FSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKRH F G   +HGVS++HR    S   +    RV+  KKMAG MG  RVT +NL+
Sbjct: 191 FAGVMKRHGFHGQDRSHGVSLTHRSMGSSGPGQGGGSRVYPGKKMAGNMGNERVTQQNLK 250

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V+ VD ++G+++V G V G  K   + ++D+ K  
Sbjct: 251 VLKVDAEKGIVVVNGSVSGP-KGCIVKLQDAIKKP 284


>gi|330470173|ref|YP_004407916.1| 50S ribosomal protein L3 [Verrucosispora maris AB-18-032]
 gi|328813144|gb|AEB47316.1| 50S ribosomal protein L3 [Verrucosispora maris AB-18-032]
          Length = 207

 Score =  236 bits (602), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 89/209 (42%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V++   + +PVTV+    C +   R  DK+GY AVQ+  G    +   KP+RG ++ 
Sbjct: 1   MTQVWD-NNKVVPVTVVQAGPCVISQVRDADKDGYSAVQLAYGTIDPRKAKKPLRGHYAK 59

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
            +V+P++ + E R     D   +G   +   F  G  +DVTG T GKG++G MKRH F G
Sbjct: 60  ADVAPRRHIVELRTSDAAD-YSLGQEITVEEFPAGISIDVTGKTKGKGYAGPMKRHGFHG 118

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
           LRA+HGV   HRS GS G    PGRVFK  +MAGRMGG R TV+NL V +VD +  L+LV
Sbjct: 119 LRASHGVERKHRSPGSIGACATPGRVFKGTRMAGRMGGVRYTVQNLTVQAVDTENNLLLV 178

Query: 192 KGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
           +G +PG  K + +LVR + K+     G  
Sbjct: 179 RGAIPGP-KGALVLVRTAAKTKAKKGGAA 206


>gi|269925831|ref|YP_003322454.1| ribosomal protein L3 [Thermobaculum terrenum ATCC BAA-798]
 gi|269789491|gb|ACZ41632.1| ribosomal protein L3 [Thermobaculum terrenum ATCC BAA-798]
          Length = 204

 Score =  236 bits (602), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 93/210 (44%), Positives = 125/210 (59%), Gaps = 6/210 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT +++  GR +PVTV+      V   +T +++GY AVQ+G  E K   
Sbjct: 1   MVEGLIGKKIGMTHIFDENGRFVPVTVIQAGPNFVTFIKTKERDGYEAVQLGFEEVK--K 58

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + KP RG     N+ P + L EF+     + L VG     S F  G+ VDVTG + GKGF
Sbjct: 59  LKKPERGHLK--NLPPLRHLREFKADNISE-LQVGQKVDASIFQAGEKVDVTGTSKGKGF 115

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH FGG   THG S  HR+ GS G    PG+V K ++MAGR GG RVTVK L VV
Sbjct: 116 TGVVKRHGFGGGPKTHGQSDRHRAPGSIGATTTPGKVLKGQRMAGRAGGERVTVKRLTVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           +VD  R L+LVKG VPGA     + +R + 
Sbjct: 176 AVDTDRNLLLVKGAVPGAN-GGLLQIRKAK 204


>gi|189460684|ref|ZP_03009469.1| hypothetical protein BACCOP_01331 [Bacteroides coprocola DSM 17136]
 gi|189432643|gb|EDV01628.1| hypothetical protein BACCOP_01331 [Bacteroides coprocola DSM 17136]
          Length = 205

 Score =  236 bits (602), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 82/204 (40%), Positives = 122/204 (59%), Gaps = 4/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   ++++K+GY AVQVG  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQVGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PK+ L EF+     + L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKRHLAEFK--DFSEELNLGDTITVELFNDASYVDVIGTSKGKGFQGV 120

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  + THG     R  GS G    P +VFK  +M G+MGG+RVT  NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTHNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
             +  L+L+KG VPG  K S +++
Sbjct: 181 IPEHNLLLIKGSVPGC-KGSIVII 203


>gi|171913926|ref|ZP_02929396.1| 50S ribosomal protein L3 [Verrucomicrobium spinosum DSM 4136]
          Length = 212

 Score =  236 bits (602), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 93/212 (43%), Positives = 125/212 (58%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT VY  +G  + VTV+ +   QVV  +  DK+GY AVQVG  E K   
Sbjct: 1   MSIGLIGKKVGMTQVYLKDGSAVAVTVIDVAGNQVVQVKNADKDGYTAVQVGYSEKKENR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SKP    F   N + K  + EFR +   +    GS      F  G+ VDV G T GKGF
Sbjct: 61  CSKPELEHFKKHNATAKYVVREFRTEG--EAPEAGSTLGADKFADGEYVDVIGTTKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG +KR+NF G  A+HG S+ HR  GS GCR  PGRV+KN+KM GR G +R T +NL+VV
Sbjct: 119 SGVVKRYNFKGQPASHG-SMMHRRTGSIGCRLTPGRVWKNQKMPGRHGFDRRTTQNLKVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
               + G++L+ G VPG    S+++VR + K 
Sbjct: 178 QSRAEDGVLLIAGAVPGPN-GSYVIVRPAIKK 208


>gi|121534759|ref|ZP_01666580.1| ribosomal protein L3 [Thermosinus carboxydivorans Nor1]
 gi|121306779|gb|EAX47700.1| ribosomal protein L3 [Thermosinus carboxydivorans Nor1]
          Length = 217

 Score =  236 bits (602), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 95/216 (43%), Positives = 132/216 (61%), Gaps = 5/216 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
              ++ +KLGMT ++  EG  +PVTV+      +V  +T++ +GY AVQ+G G  K K V
Sbjct: 5   TKAILGKKLGMTQIFTAEGHLVPVTVVEAAPNVLVQRKTVETDGYNAVQLGFGAVKDKKV 64

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KPM+G F+   V P + + E R+  + +   VG       F+ G+LVDVTG   GKGF+
Sbjct: 65  TKPMKGHFAKAGVKPVRFIRELRLPSEPE-FQVGQTIGVDIFSDGELVDVTGTGKGKGFA 123

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQD--PGRVFKNKKMAGRMGGNRVTVKNLEV 179
           G +KRHNF      HG S SHR  GS G R     G+VFK KK+ GRMGG+RVTV+ L V
Sbjct: 124 GGIKRHNFKRGPMAHG-SKSHREPGSMGPRMSGGGGKVFKGKKLPGRMGGHRVTVQRLTV 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           V VD  R L+L+KG +PGA K S ++V+++ K A  
Sbjct: 183 VRVDKDRNLLLIKGAIPGA-KGSLVMVKNTVKPAKK 217


>gi|149632093|ref|XP_001514282.1| PREDICTED: similar to Mitochondrial ribosomal protein L3
           [Ornithorhynchus anatinus]
          Length = 429

 Score =  236 bits (602), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 78/219 (35%), Positives = 116/219 (52%), Gaps = 4/219 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYM-AVQVGAGEAKVKN 60
           R G++A KLGM  ++   G++  VT+L + +C VV +   +  G + A+ VG   A    
Sbjct: 178 RVGLIALKLGMMPLWTKNGKKHAVTLLQVQDCHVVKYTPSEGAGKLGALTVGGKNASPFY 237

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S+     +    V PK+++  FRV ++  + P G+    ++F  GQ VDVT  TIGKGF
Sbjct: 238 KSEESLEMYREAGVPPKQRIKIFRVTENAKIKP-GTPLYAAHFRPGQYVDVTAKTIGKGF 296

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G MKR  F G  ATHG + +HR  G+     D  RV+  KKM G+MG    T   L+V 
Sbjct: 297 QGVMKRWGFKGQPATHGQTKTHRRPGAI-STGDIARVWPGKKMPGQMGNRYQTAFGLKVW 355

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            ++ K  +I V G VPG  K+ ++ +RD+       K K
Sbjct: 356 RINTKHNIIYVNGSVPG-HKSCFVKIRDTKLPTYRDKLK 393


>gi|113476579|ref|YP_722640.1| 50S ribosomal protein L3 [Trichodesmium erythraeum IMS101]
 gi|123056500|sp|Q110A7|RL3_TRIEI RecName: Full=50S ribosomal protein L3
 gi|110167627|gb|ABG52167.1| LSU ribosomal protein L3P [Trichodesmium erythraeum IMS101]
          Length = 227

 Score =  236 bits (602), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 88/224 (39%), Positives = 120/224 (53%), Gaps = 18/224 (8%)

Query: 1   MRSGVVARKLGMTCVY-NIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV- 58
           M  G++  KLGMT V+    G+ IPVTV+    C V   +T   +GY AVQ+G GEAK  
Sbjct: 1   MVVGILGTKLGMTQVFEAETGKAIPVTVVEAGPCVVTQIKTEQTDGYTAVQIGYGEAKNK 60

Query: 59  -------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105
                        + ++    G       +P + L E+RV    +   +G       F  
Sbjct: 61  TRQLNTKEPKEVNRYLTNAQEGHLVKSGGTPLRYLREYRVDNTGNF-ELGQQIKVDLFEA 119

Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
           GQLVDVTG +IGKGF+G  KRHNF      HG S +HR  GSTG    PGRV+  KKMAG
Sbjct: 120 GQLVDVTGKSIGKGFAGYQKRHNFRRGPMAHG-SKNHRLPGSTGPGTTPGRVYPGKKMAG 178

Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            +G  RVT + L++V +D +R L+L+KG +PG K  + I +  +
Sbjct: 179 HLGNVRVTTRKLKIVRIDPERNLLLIKGSIPG-KSGTLISIAPA 221


>gi|303237517|ref|ZP_07324082.1| 50S ribosomal protein L3 [Prevotella disiens FB035-09AN]
 gi|302482337|gb|EFL45367.1| 50S ribosomal protein L3 [Prevotella disiens FB035-09AN]
          Length = 204

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 82/205 (40%), Positives = 121/205 (59%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G GEAK    SK
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTIEKDGYKAVQLGFGEAKESRTSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G F     +PKK L EF+  ++     +G   +   F   + VDV G + GKGF G 
Sbjct: 63  PQQGHFKKAGTTPKKHLAEFKFDEE---YNLGDTITVELFNDTKFVDVVGTSKGKGFQGV 119

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           MKRH FGG  ++THG     R  GS G    P +VFK  +M G MGG+ VT +NL+V+ V
Sbjct: 120 MKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGHMGGDTVTTQNLQVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  ++LVKG V G   ++ I+ +
Sbjct: 180 IPEHNILLVKGSVAGCNGSTLIINK 204


>gi|33862114|ref|NP_893675.1| 50S ribosomal protein L3 [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|42559598|sp|Q7UZU7|RL3_PROMP RecName: Full=50S ribosomal protein L3
 gi|33634332|emb|CAE20017.1| 50S ribosomal protein L3 [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 217

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 81/208 (38%), Positives = 129/208 (62%), Gaps = 3/208 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +G  +PVT++    C+V   +T   +GY A+Q+G G +K K+
Sbjct: 1   MSIGILGKKLGMSQLFDKDGNAVPVTLIEAGPCRVTQLKTQPLDGYTAIQIGYGVSKDKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SKP +G          K L E+RV+++     +G   + + F VGQ VD++G ++G+GF
Sbjct: 61  LSKPEKGHLLKSGEILLKHLKEYRVEENSS-YEIGKEITVTNFEVGQKVDISGKSMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRH F     +HG S +HR+ GSTG    PGR++  K+MAGR GG ++T K L VV
Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKKITTKGLLVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
            +DD++ L++VKG VPG    S + ++ 
Sbjct: 179 KIDDQKNLLVVKGSVPGKP-GSIVNIKP 205


>gi|297621720|ref|YP_003709857.1| 50S ribosomal protein L3 [Waddlia chondrophila WSU 86-1044]
 gi|297377021|gb|ADI38851.1| 50S ribosomal protein L3 [Waddlia chondrophila WSU 86-1044]
          Length = 220

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 81/220 (36%), Positives = 123/220 (55%), Gaps = 9/220 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--- 57
           M   ++ +K GMT +++ +G  +  TV+ ++   V   +T   +GY AVQVG  +     
Sbjct: 1   MALKLMGKKRGMTHLFDEKGNVVVCTVIEMEPNVVTQIKTQGTDGYDAVQVGFDKVTTKD 60

Query: 58  ----VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113
                + V KP+RG F    V P++ + E R+  D     VG  F  + F   + +D T 
Sbjct: 61  PRTMDQRVKKPLRGHFKKAGVEPRRHMLESRLS-DVTGYQVGQEFDVTAFNEVKFIDATA 119

Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
           ++IGKGF GAMK H F G+ A+HG   +HRS GSTG R  PGR F   K A +MG  +VT
Sbjct: 120 ISIGKGFQGAMKLHGFSGMPASHGAKKNHRSLGSTGGRSTPGRCFPGGKRASQMGNRQVT 179

Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           ++NLE+V +  +  +++VKG +PG  KN  + +R + K A
Sbjct: 180 IQNLEIVQIIPEENVVVVKGSIPGP-KNGVVTMRQAVKKA 218


>gi|269122581|ref|YP_003310758.1| ribosomal protein L3 [Sebaldella termitidis ATCC 33386]
 gi|268616459|gb|ACZ10827.1| ribosomal protein L3 [Sebaldella termitidis ATCC 33386]
          Length = 208

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 90/209 (43%), Positives = 122/209 (58%), Gaps = 4/209 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT ++    + IPVTV+      V+  + ++K+GY A+ +G  E K KN  KP
Sbjct: 2   LLGKKIGMTQIF-EGEKLIPVTVIEAGPNFVIQKKNVEKDGYNALTLGYDEKKEKNTIKP 60

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
             G F    V+PKK L EFR    D    +G       F   + VDV+G + GKG +G M
Sbjct: 61  EMGVFKKAGVTPKKFLKEFRTDNLDS-YELGQEIKVDSFEGIEFVDVSGTSKGKGTAGVM 119

Query: 125 KRHNFGGLRATHGVSISHRSHGST-GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           KRHNFGG RATHGVS +HR  GS  G       V K KKMAGR+G   VTV+NL VV  D
Sbjct: 120 KRHNFGGNRATHGVSRNHRLGGSNAGGAASNSNVPKGKKMAGRLGNENVTVQNLRVVKFD 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  L+LVKG +PG  KN +++++ S K 
Sbjct: 180 VENNLLLVKGAIPGP-KNGYLVIKKSVKK 207


>gi|262038282|ref|ZP_06011672.1| 50S ribosomal protein L3 [Leptotrichia goodfellowii F0264]
 gi|261747749|gb|EEY35198.1| 50S ribosomal protein L3 [Leptotrichia goodfellowii F0264]
          Length = 208

 Score =  235 bits (601), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 89/209 (42%), Positives = 124/209 (59%), Gaps = 4/209 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT ++    + IPVTV+      VV  ++ +K+GY AV +   + K KN  KP
Sbjct: 2   ILGKKIGMTQIF-ENEKLIPVTVIEAGPNFVVQKKSEEKDGYNAVTLAYDDKKEKNTIKP 60

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
             G F    +SPKK L EF+V + +    +G  F        + VD+ G + GKG +G M
Sbjct: 61  EMGIFKKAGISPKKFLKEFKVAELESF-ELGQEFKVDVLEGIEFVDIVGTSKGKGTAGVM 119

Query: 125 KRHNFGGLRATHGVSISHRSHGST-GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           KRHNFGG RATHGVS +HR  GS  G       V K KKMAGR+G  +VTV+NL+VV  D
Sbjct: 120 KRHNFGGNRATHGVSRNHRLGGSNAGGAASNSNVPKGKKMAGRLGNEQVTVQNLKVVKFD 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  L+LVKG VPG  KN +++++ S K 
Sbjct: 180 AENNLLLVKGAVPGP-KNGYLVIKKSVKK 207


>gi|149179414|ref|ZP_01857968.1| 50S ribosomal protein L3 [Planctomyces maris DSM 8797]
 gi|148841725|gb|EDL56134.1| 50S ribosomal protein L3 [Planctomyces maris DSM 8797]
          Length = 229

 Score =  235 bits (601), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 86/224 (38%), Positives = 123/224 (54%), Gaps = 20/224 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT +Y+ +G  +PVTV+    C V+  RTLD +GY AVQVG  +   + 
Sbjct: 1   MPVGLLGKKVGMTQIYD-DGVMVPVTVIQAGPCHVLQVRTLDTDGYEAVQVGFEDKPRRL 59

Query: 61  VSKPMRGFFS-------------------SVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS 101
            ++  RG  +                        PK+ + EFR   +D    VG   + S
Sbjct: 60  AARSERGHVAALDSKRQKKRAESGVAVVDKAGCEPKRFVKEFRTDGEDHGCEVGGELTVS 119

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F     +DV G + G+GF+G MKRHNF G RATHGV   HR  GS G   DP RV K  
Sbjct: 120 VFADVPFIDVIGTSKGRGFAGVMKRHNFSGQRATHGVKRVHRHGGSIGMSADPSRVLKGT 179

Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWIL 205
           +M GR GG ++TV++L+VV VD++ G++LV+G VPG      ++
Sbjct: 180 RMGGRYGGKQITVRHLKVVRVDEENGVLLVRGAVPGPNGGDLVI 223


>gi|148689150|gb|EDL21097.1| mitochondrial ribosomal protein L3, isoform CRA_b [Mus musculus]
          Length = 292

 Score =  235 bits (600), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 76/221 (34%), Positives = 112/221 (50%), Gaps = 5/221 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
            R G++A KLGM  ++  +G++  VT+L + +C V+ +   + +      +  G   V  
Sbjct: 39  FRVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKIAALTVGGKTVSR 98

Query: 61  VSKP--MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
             KP     F+  + + PK+    F V  D+ ++  G+    ++F  GQ VDVT  TIGK
Sbjct: 99  FYKPDSRLEFYRDLGLPPKQIHKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGK 157

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G MKR  F G  A+HG + +HR  G+     D  RV+   KM GRMG    TV  L+
Sbjct: 158 GFQGVMKRWGFKGQPASHGQTKTHRRPGAI-STGDIARVWPGTKMPGRMGNQNRTVYGLK 216

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           V  V+ K  +I V G VPG  KN  + ++DS   A     K
Sbjct: 217 VWRVNTKHNIIYVNGSVPG-HKNCLVKIKDSTLPAYKDSCK 256


>gi|27904942|ref|NP_778068.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|42559626|sp|Q89A68|RL3_BUCBP RecName: Full=50S ribosomal protein L3
 gi|27904340|gb|AAO27173.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 214

 Score =  235 bits (600), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 84/210 (40%), Positives = 125/210 (59%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +KLGMT ++  EG   PVT++ +   ++   +T+ ++ Y AVQV  G  K   + 
Sbjct: 2   MGLIGQKLGMTRIFTEEGTVYPVTIIKVKENRITQIKTISRDLYHAVQVTTGIKKSNKLL 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           KP  G F    V   K L+EF++     +   +G   +   F+  + VD+ G + GKGF 
Sbjct: 62  KPEIGHFLKSGVKIGKGLWEFKLTNSSINDFKIGQSLNLELFSNIKKVDIIGTSKGKGFC 121

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR NF    ATHG S+SHR+ GS G  Q PGRVFK KKMAG +G +RVTV+NL++V 
Sbjct: 122 GTVKRWNFHTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHLGNHRVTVQNLDIVK 181

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +D  + +ILVKG VPG    + I+++ + K
Sbjct: 182 IDLNQEIILVKGAVPGYSGGN-IIIKPAIK 210


>gi|303230114|ref|ZP_07316883.1| 50S ribosomal protein L3 [Veillonella atypica ACS-134-V-Col7a]
 gi|303231226|ref|ZP_07317964.1| 50S ribosomal protein L3 [Veillonella atypica ACS-049-V-Sch6]
 gi|302514133|gb|EFL56137.1| 50S ribosomal protein L3 [Veillonella atypica ACS-049-V-Sch6]
 gi|302515175|gb|EFL57148.1| 50S ribosomal protein L3 [Veillonella atypica ACS-134-V-Col7a]
          Length = 213

 Score =  235 bits (600), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 98/214 (45%), Positives = 132/214 (61%), Gaps = 5/214 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ +KLGMT V+  EG+ +PVTV+      VV  +T++ +GY AVQ+G G  K K+
Sbjct: 1   MSKAILGKKLGMTQVFTAEGQLVPVTVVETTPSVVVRVKTVETDGYEAVQIGYGSIKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP++G F    V+P K L E RV    D   VG   +   F  G+LVDV G   GKGF
Sbjct: 61  LTKPVKGQFDKAGVAPVKYLREVRVDSAAD-YTVGQTLAADIFAEGELVDVVGTGKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KRHNF     THG S SHR  GS G       G+V+K KK+ G+MGG RVTV+ L 
Sbjct: 120 AGTIKRHNFSRGPETHG-SKSHREPGSIGPMISGGGGKVYKGKKLPGQMGGYRVTVQRLS 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VV VD +R L+LVKG +PGA K S ++VR++ K 
Sbjct: 179 VVKVDAERNLLLVKGGIPGA-KGSLVMVRNTVKP 211


>gi|283853153|ref|ZP_06370406.1| ribosomal protein L3 [Desulfovibrio sp. FW1012B]
 gi|283571411|gb|EFC19418.1| ribosomal protein L3 [Desulfovibrio sp. FW1012B]
          Length = 210

 Score =  235 bits (600), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 86/204 (42%), Positives = 118/204 (57%), Gaps = 2/204 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT ++  +G  IPVTV+    C V   +T +K+GY A+Q+G  +   + V+K
Sbjct: 6   GILGRKLGMTRIFGDDGSIIPVTVIEAGPCPVTQVKTAEKDGYNAMQIGFDQIPERKVNK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G          + L E R+         G   +   F  G+ V VTG +IGKGF+G 
Sbjct: 66  PEKGHLDKAGRGYYRVLKEIRLDGP-SAFEQGMDVTVDIFAPGETVKVTGTSIGKGFAGV 124

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR NF GL+ THG   +HRS GS G   +PG+V K KKMAG MG   VT+  +E+V V 
Sbjct: 125 MKRWNFAGLKKTHGTEKAHRSGGSIGNNTEPGKVMKGKKMAGHMGARTVTMLGIEIVDVR 184

Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207
            +  LILVKG VPG  +N  ++VR
Sbjct: 185 PEMNLILVKGQVPGP-RNCVVMVR 207


>gi|224023618|ref|ZP_03641984.1| hypothetical protein BACCOPRO_00325 [Bacteroides coprophilus DSM
           18228]
 gi|224016840|gb|EEF74852.1| hypothetical protein BACCOPRO_00325 [Bacteroides coprophilus DSM
           18228]
          Length = 205

 Score =  235 bits (600), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 82/204 (40%), Positives = 122/204 (59%), Gaps = 4/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   ++++K+GY AVQVG  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQVGFQDMKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PK+ L EF+     + L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKRHLAEFK--DFSEELNLGDTITVELFNDANYVDVIGTSKGKGFQGV 120

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  + THG     R  GS G    P +VFK  +M G+MGG+RVT  NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTHNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
             +  L+L+KG VPG  K S +++
Sbjct: 181 IPEHNLLLIKGSVPG-YKGSIVII 203


>gi|194477058|ref|YP_002049237.1| 50S ribosomal protein L3 [Paulinella chromatophora]
 gi|212288241|sp|B1X508|RK3_PAUCH RecName: Full=50S ribosomal protein L3, organellar chromatophore
 gi|171192065|gb|ACB43027.1| 50S ribosomal protein L3 [Paulinella chromatophora]
          Length = 218

 Score =  235 bits (600), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 82/210 (39%), Positives = 125/210 (59%), Gaps = 3/210 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+  ++ EG+ +PVT++    C++   +++D +GY AVQ+G GE + K 
Sbjct: 1   MSIGILGKKLGMSQFFDEEGKAVPVTLIEAGPCRITQLKSIDTDGYTAVQLGYGETRQKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KP +G  +         L E+RV+  D  L +G+  +   F  GQ VDV+G ++G+GF
Sbjct: 61  VNKPSKGHLARSGEQLLSHLREYRVETIDG-LKLGNSITVEDFKAGQKVDVSGDSMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRH F     THG S +HR  GSTG    PGR++  K+MAGR GG ++T + L +V
Sbjct: 120 SGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKQITTRGLVIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
            VD    L++VKG VPG    S + +  + 
Sbjct: 179 KVDTGHNLLVVKGSVPGKP-GSLLNIFPAK 207


>gi|325856043|ref|ZP_08171932.1| 50S ribosomal protein L3 [Prevotella denticola CRIS 18C-A]
 gi|327313190|ref|YP_004328627.1| 50S ribosomal protein L3 [Prevotella denticola F0289]
 gi|325483715|gb|EGC86679.1| 50S ribosomal protein L3 [Prevotella denticola CRIS 18C-A]
 gi|326944923|gb|AEA20808.1| 50S ribosomal protein L3 [Prevotella denticola F0289]
          Length = 204

 Score =  235 bits (600), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 84/205 (40%), Positives = 123/205 (60%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G GEAK K  SK
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKTVEKDGYKAVQLGFGEAKEKRTSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F     +PKK L EF+  ++     +G   +   F   + VDV G + GKGF G 
Sbjct: 63  PQLGHFKKAGTTPKKHLAEFKFDEE---YNLGDTITVELFNDTKFVDVVGTSKGKGFQGV 119

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  ++THG     R  GS G    P +VFK  +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  L+LVKG V G   ++ I+ +
Sbjct: 180 IPEHNLLLVKGSVAGCNGSTVIISK 204


>gi|257790717|ref|YP_003181323.1| 50S ribosomal protein L3 [Eggerthella lenta DSM 2243]
 gi|317488572|ref|ZP_07947117.1| 50S ribosomal protein L3 [Eggerthella sp. 1_3_56FAA]
 gi|325831933|ref|ZP_08165030.1| 50S ribosomal protein L3 [Eggerthella sp. HGA1]
 gi|257474614|gb|ACV54934.1| ribosomal protein L3 [Eggerthella lenta DSM 2243]
 gi|316912314|gb|EFV33878.1| 50S ribosomal protein L3 [Eggerthella sp. 1_3_56FAA]
 gi|325486254|gb|EGC88706.1| 50S ribosomal protein L3 [Eggerthella sp. HGA1]
          Length = 206

 Score =  235 bits (600), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 89/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M + +  +K+GMT ++N + R +PVTV+  +   +   +T D +GY AVQ+G G  K K 
Sbjct: 1   MINAIYGKKIGMTQIFNEDDRVVPVTVIQAEPNTICQVKTKDSDGYEAVQLGFGAIKEKK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM G F+    +P + L E RV+       VG   + + F   + VDVTG + GKGF
Sbjct: 61  VNKPMAGHFAKQGTAPTRYLREVRVEN-AGEYKVGDQQTVAAFAETKKVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR+ F G    HG    HR+ GS G    P RVFK  K+ G MG + VTVKNLEVV
Sbjct: 120 AGVMKRYGFRGGPGGHGAH-FHRAPGSVGQCATPSRVFKGLKLPGHMGVDTVTVKNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            +D+++ LILVKG +PG  KN  + VR +
Sbjct: 179 RIDEEQNLILVKGAIPGG-KNGVVRVRMA 206


>gi|320585734|gb|EFW98413.1| 50S ribosomal protein l3 [Grosmannia clavigera kw1407]
          Length = 376

 Score =  235 bits (599), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 99/222 (44%), Positives = 138/222 (62%), Gaps = 2/222 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+GV+A K GMT  Y+  G RIP TVL L++ QVV  +T   +GY AVQVG+G  +   
Sbjct: 93  VRTGVLATKRGMTAFYSKSGTRIPCTVLQLEDVQVVATKTRAGHGYWAVQVGSGTRRAAT 152

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+ P+ G++ +  V+PK  L EFRV+    LL  G    P +F VGQ VD   ++ G GF
Sbjct: 153 VAAPLLGYYEAKGVAPKAHLAEFRVRDASGLLTPGVALQPDWFHVGQWVDTRSLSRGFGF 212

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179
           +GAMK+H F G   THG S++HR+ G+TG  Q  G RV   KKM GRMG  RVTV+NL V
Sbjct: 213 AGAMKKHGFKGQNKTHGNSLNHRTMGTTGPSQGSGSRVMPGKKMPGRMGCERVTVQNLNV 272

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
           + VD++ G+++VKG V G  K + + ++D+ K        V+
Sbjct: 273 LQVDNELGIVVVKGAV-GGPKGALVRLQDAVKKPQPSPAFVA 313


>gi|198274003|ref|ZP_03206535.1| hypothetical protein BACPLE_00139 [Bacteroides plebeius DSM 17135]
 gi|198273081|gb|EDY97350.1| hypothetical protein BACPLE_00139 [Bacteroides plebeius DSM 17135]
          Length = 205

 Score =  235 bits (599), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 82/204 (40%), Positives = 122/204 (59%), Gaps = 4/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   ++++K+GY AVQVG  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQVGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PK+ L EF+     + L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKRHLAEFK--DFSEELNLGDTITVELFNDTAYVDVIGTSKGKGFQGV 120

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  + THG     R  GS G    P +VFK  +M G+MGG+RVT  NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTHNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
             +  L+L+KG VPG  K S +++
Sbjct: 181 IPEHNLLLIKGSVPGC-KGSIVII 203


>gi|71842315|ref|YP_277403.1| ribosomal protein L3 [Emiliania huxleyi]
 gi|109893084|sp|Q4G364|RK3_EMIHU RecName: Full=50S ribosomal protein L3, chloroplastic
 gi|52547746|gb|AAU81908.1| ribosomal protein L3 [Emiliania huxleyi]
 gi|60101558|gb|AAX13902.1| ribosomal protein L3 [Emiliania huxleyi]
          Length = 207

 Score =  235 bits (599), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 89/211 (42%), Positives = 130/211 (61%), Gaps = 5/211 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M +G+  RK+GMT +++ +G  IPVT++  D CQV   +T   +GY A+QVG  E K+  
Sbjct: 1   MTAGIFGRKIGMTQIFDKDGSAIPVTLVKADPCQVCQIKTTKTDGYDAIQVGYLEEKLSK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SKP++G       +  +K  EFRV +D +   +G   + S F+VGQ V VTG +IGKGF
Sbjct: 61  ISKPIQGHLQKCGSTGYRKFGEFRV-EDPETYNLGDQITTSAFSVGQKVRVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRHNF     THG S +HR  GS G    PGRV+  KKMAG +G  + T+KN E++
Sbjct: 120 AGNQKRHNFSRGPMTHG-SKNHRLPGSIGAGSTPGRVYPGKKMAGHLGNTKTTIKNSEIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            V +K  ++++KG +PG  KN   ++R + K
Sbjct: 179 FVSEKENILILKGSLPGKAKN---ILRIAAK 206


>gi|312899043|ref|ZP_07758427.1| 50S ribosomal protein L3 [Megasphaera micronuciformis F0359]
 gi|310619828|gb|EFQ03404.1| 50S ribosomal protein L3 [Megasphaera micronuciformis F0359]
          Length = 212

 Score =  235 bits (599), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 92/214 (42%), Positives = 128/214 (59%), Gaps = 5/214 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ +KLGMT V+  EG  +PVTV+      VV  +T+D +GY ++Q+G GE K K+
Sbjct: 1   MSKAILGKKLGMTQVFTEEGAVVPVTVVEASPNVVVRVKTVDTDGYNSIQLGYGEIKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP++G F    VSP K L E R+    +   VG   +   F  G LVDV G T GKGF
Sbjct: 61  LTKPVKGQFDKAGVSPVKHLRELRLTDTPE-YTVGQTLAADIFASGDLVDVVGTTKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KRH F      HG S SHR  GS G       G+V K KK+ G+MGGN+ TV +L 
Sbjct: 120 AGTIKRHGFHRGPMGHG-SKSHREPGSLGPMISGGGGKVIKGKKLPGQMGGNQATVLHLS 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VV VD ++ +IL+KG +PG  K S +++RD+ K 
Sbjct: 179 VVKVDTEKNIILIKGGIPGP-KGSIVMIRDTVKP 211


>gi|296228096|ref|XP_002759663.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like isoform 2
           [Callithrix jacchus]
          Length = 348

 Score =  235 bits (599), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 80/216 (37%), Positives = 117/216 (54%), Gaps = 5/216 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGY-MAVQVGAGEAKVK 59
           R G+VA KLGM  ++  +G+R  VT+L + +C V+ + + +  +G   A+ VG       
Sbjct: 96  RVGLVAVKLGMMPLWTKDGQRHVVTLLQVRDCHVLKYISKENHDGKMAALSVGGKTVSRF 155

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           + S  +  F+  + + PK+K+  FR+  +  L P G+    ++F  GQ VDVT  TIGKG
Sbjct: 156 HKSTQILEFYRELGLPPKQKVKIFRITDNAALKP-GTPLYAAHFRPGQYVDVTAKTIGKG 214

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR  F G  ATHG + +HR  G+     D  RV+   K+ G+MG    TV  L+V
Sbjct: 215 FQGVMKRWGFKGQPATHGQTKTHRRPGAI-STGDVARVWPGTKLPGQMGNIDRTVHGLKV 273

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             ++ K  +I V G VPG  KN  + VRDS   A  
Sbjct: 274 WRINTKHNIIYVNGSVPG-HKNCLVKVRDSKLPAYK 308


>gi|157821097|ref|NP_001100322.1| 39S ribosomal protein L3, mitochondrial [Rattus norvegicus]
 gi|149018711|gb|EDL77352.1| mitochondrial ribosomal protein L3 (predicted), isoform CRA_a
           [Rattus norvegicus]
          Length = 348

 Score =  235 bits (599), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 75/217 (34%), Positives = 115/217 (52%), Gaps = 7/217 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVKN 60
           R G++A KLGM  ++  +G++  VT+L + +C V+ +   +  NG  A  +  G      
Sbjct: 96  RVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKTA-ALTVGGKTGSR 154

Query: 61  VSKP--MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           + KP  +  F+  + + PK+ +  F V  D+ ++  G+    ++F  GQ VDVT  TIGK
Sbjct: 155 LYKPNSILEFYRDLGLPPKQTIKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGK 213

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G MKR  F G  A+HG + +HR  G+     D  RV+   KM G+MG    TV  L+
Sbjct: 214 GFQGVMKRWGFKGQPASHGQTKTHRRPGAI-STGDIARVWPGTKMPGQMGNQNRTVYGLK 272

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           V  V+ K  +I V G VPG  +N  + ++DS   A  
Sbjct: 273 VWRVNTKHNIIYVNGSVPG-HRNCLVKIKDSTLPAYK 308


>gi|255943633|ref|XP_002562584.1| Pc20g00200 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211587319|emb|CAP85349.1| Pc20g00200 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 296

 Score =  235 bits (599), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 95/215 (44%), Positives = 134/215 (62%), Gaps = 3/215 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +  K GMT +Y+   G+RIP TVL LD  +V+ H+T +++GY AVQVGAG     
Sbjct: 68  LRTGAIGIKKGMTAIYDPESGKRIPCTVLQLDRVEVISHKTRERHGYYAVQVGAGWKHPS 127

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           NV+K M G FS   +SPK+ +FEFRV+ +  L+PVG      +F  GQ VD    T GKG
Sbjct: 128 NVTKSMLGHFSVNGISPKRHIFEFRVKDEAGLIPVGQSIEAGWFQEGQFVDARSNTKGKG 187

Query: 120 FSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKRH FGG   +HGVS++HR    S   +    RV+  KKMAG MG  + TV+NL+
Sbjct: 188 FAGVMKRHGFGGQDRSHGVSLTHRSMGSSGPGQGGGSRVYPGKKMAGNMGNTQNTVQNLK 247

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           ++ VD + G+++V G V G  K   + ++D+ K  
Sbjct: 248 ILKVDSENGIVVVSGAVSGP-KGCVVRIQDAIKKP 281


>gi|118411058|ref|YP_874453.1| 50S ribosomal protein L3 [Phaeodactylum tricornutum]
 gi|125987627|sp|A0T0H8|RK3_PHATC RecName: Full=50S ribosomal protein L3, chloroplastic
 gi|116739805|gb|ABK20676.1| 50S ribosomal protein L3 [Phaeodactylum tricornutum]
          Length = 207

 Score =  235 bits (599), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 78/209 (37%), Positives = 123/209 (58%), Gaps = 2/209 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT +++  G  IPVT+L +  C +   +   K+GY ++Q+G G    K 
Sbjct: 1   MVVGLLGNKIGMTQIFDESGNIIPVTILKVGPCVITQVKNQSKDGYDSIQIGYGNVLSKA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G     N+ P K L EFR+ ++ +   +G V +   FT GQLV++ G +IGKGF
Sbjct: 61  LTQPELGHLQKSNIQPLKYLKEFRINQETE-FQIGQVLNVDSFTPGQLVNIQGKSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRHNF     THG S +HR+ GS G    PGRV   KKM+G++G    T+K L+++
Sbjct: 120 SGLQKRHNFTRGPMTHG-SKNHRAPGSIGMGTTPGRVLPGKKMSGQLGNKITTIKKLKII 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            ++ +  ++++KG VPG   N   +V  +
Sbjct: 179 QINSEENILVIKGSVPGKPGNLLSIVPSA 207


>gi|290968244|ref|ZP_06559787.1| 50S ribosomal protein L3 [Megasphaera genomosp. type_1 str. 28L]
 gi|290781726|gb|EFD94311.1| 50S ribosomal protein L3 [Megasphaera genomosp. type_1 str. 28L]
          Length = 212

 Score =  235 bits (599), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 91/214 (42%), Positives = 128/214 (59%), Gaps = 5/214 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ +KLGMT ++  EG  +PVTV+      VV  +T+D +GY ++Q+G GE K K+
Sbjct: 1   MSKAILGKKLGMTQIFTEEGAVVPVTVVEASPNVVVRVKTVDTDGYNSIQIGYGEVKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP++G F+   V+P K L E R+    +   VG   +   F  G LVDV G   GKGF
Sbjct: 61  LTKPVKGQFAKAGVNPVKYLRELRLTDTPE-YTVGQTLAADIFASGDLVDVIGTGKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KRH F      HG S SHR  GS G       G+V K KK+ G+MGGN+ TV +L 
Sbjct: 120 AGTIKRHGFHRGPMGHG-SKSHREPGSLGPMISGGGGKVVKGKKLPGQMGGNQATVLHLS 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VV VD  + LIL+KG +PGA K S +++RD+ K 
Sbjct: 179 VVKVDMDKNLILIKGGIPGA-KGSLVMIRDTVKP 211


>gi|206900842|ref|YP_002250701.1| ribosomal protein L3 [Dictyoglomus thermophilum H-6-12]
 gi|206739945|gb|ACI19003.1| ribosomal protein L3 [Dictyoglomus thermophilum H-6-12]
          Length = 215

 Score =  234 bits (598), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 80/210 (38%), Positives = 116/210 (55%), Gaps = 4/210 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
              ++ RK+GMT ++   G  IPVTV+    C V+  +T +K+GY A+Q+G    K   +
Sbjct: 6   TKAILGRKIGMTQIFTDSGELIPVTVIKGGPCLVLNVKTKEKDGYDAIQLGFENCKESKL 65

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F  + + P + + E RV+   D    G       F  G+LVD+TG + G GF+
Sbjct: 66  NKPQLGIFKKLGLPPFRIIKEVRVKNPLD-YTRGQEIRVDIFQEGELVDITGKSKGHGFT 124

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F   R +HG S  HR   S G       V K +KMAGR G   +TV+NL+VV 
Sbjct: 125 GHIKRWGFRRGRMSHG-SKFHRRRASIGAGG-VQHVMKGQKMAGRWGNETITVQNLKVVK 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           VD ++ +ILVKG VPG   N  +++R + K
Sbjct: 183 VDKEKDIILVKGAVPGPTGN-LLIIRKAVK 211


>gi|123969297|ref|YP_001010155.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. AS9601]
 gi|166233179|sp|A2BTD7|RL3_PROMS RecName: Full=50S ribosomal protein L3
 gi|123199407|gb|ABM71048.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. AS9601]
          Length = 217

 Score =  234 bits (598), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 81/208 (38%), Positives = 127/208 (61%), Gaps = 3/208 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +G  +PVT++    C+V   +T   +GY AVQ+G G +K K+
Sbjct: 1   MSIGILGKKLGMSQLFDDKGNSVPVTLIEAGPCRVTQLKTTALDGYTAVQIGYGLSKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SKP +G          K L E+RV++      +G   +   F VGQ VD++G ++G+GF
Sbjct: 61  LSKPEKGHLLKSGEELLKHLKEYRVEETSS-YEIGKQITVKNFEVGQKVDISGKSMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     +HG S +HR+ GSTG    PGR++  K+MAGR GG ++T K L V+
Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
            +DD++ L++VKG VPG    S I ++ 
Sbjct: 179 KIDDQKNLLVVKGSVPGKP-GSIINIKP 205


>gi|116490658|ref|YP_810202.1| 50S ribosomal protein L3P [Oenococcus oeni PSU-1]
 gi|290890074|ref|ZP_06553157.1| hypothetical protein AWRIB429_0547 [Oenococcus oeni AWRIB429]
 gi|122277158|sp|Q04G85|RL3_OENOB RecName: Full=50S ribosomal protein L3
 gi|116091383|gb|ABJ56537.1| LSU ribosomal protein L3P [Oenococcus oeni PSU-1]
 gi|290480265|gb|EFD88906.1| hypothetical protein AWRIB429_0547 [Oenococcus oeni AWRIB429]
          Length = 247

 Score =  234 bits (598), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 78/220 (35%), Positives = 115/220 (52%), Gaps = 6/220 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  +G  IPVTV+      V+  +T + +GY A+Q+G  + +   
Sbjct: 1   MTKGILGRKVGMTQVFTDKGELIPVTVIEALPNVVLQVKTPETDGYSALQLGVFDKRKIA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G     + +PK+ + E R  + D     G       F  G+ VDV G+T G GF
Sbjct: 61  ANKPEQGHAKKASAAPKRYVREIRDAQGD--YKQGDKVKVDVFAAGEYVDVQGITKGHGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G++KR         HG S  HR  GS G      +VFK K + G+MGG+  T + L V 
Sbjct: 119 QGSIKRLGQSRGPMAHG-SRYHRRPGSMGSI--INKVFKGKLLPGQMGGDLRTAQKLLVA 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
            VD    LIL+KG VPGA K S++ ++ + K     K K+
Sbjct: 176 GVDPANNLILIKGNVPGANK-SFVTIKSTVKPFKASKIKL 214


>gi|150003387|ref|YP_001298131.1| 50S ribosomal protein L3 [Bacteroides vulgatus ATCC 8482]
 gi|212695305|ref|ZP_03303433.1| hypothetical protein BACDOR_04845 [Bacteroides dorei DSM 17855]
 gi|237711673|ref|ZP_04542154.1| 50S ribosomal protein L3 [Bacteroides sp. 9_1_42FAA]
 gi|237725885|ref|ZP_04556366.1| 50S ribosomal protein L3 [Bacteroides sp. D4]
 gi|254881322|ref|ZP_05254032.1| 50S ribosomal protein L3 [Bacteroides sp. 4_3_47FAA]
 gi|265753093|ref|ZP_06088662.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_33FAA]
 gi|294777821|ref|ZP_06743265.1| 50S ribosomal protein L3 [Bacteroides vulgatus PC510]
 gi|319640324|ref|ZP_07995049.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_40A]
 gi|166233118|sp|A6KYJ5|RL3_BACV8 RecName: Full=50S ribosomal protein L3
 gi|149931811|gb|ABR38509.1| 50S ribosomal protein L3 [Bacteroides vulgatus ATCC 8482]
 gi|212662215|gb|EEB22789.1| hypothetical protein BACDOR_04845 [Bacteroides dorei DSM 17855]
 gi|229435693|gb|EEO45770.1| 50S ribosomal protein L3 [Bacteroides dorei 5_1_36/D4]
 gi|229454368|gb|EEO60089.1| 50S ribosomal protein L3 [Bacteroides sp. 9_1_42FAA]
 gi|254834115|gb|EET14424.1| 50S ribosomal protein L3 [Bacteroides sp. 4_3_47FAA]
 gi|263236279|gb|EEZ21774.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_33FAA]
 gi|294448275|gb|EFG16831.1| 50S ribosomal protein L3 [Bacteroides vulgatus PC510]
 gi|317388099|gb|EFV68953.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_40A]
          Length = 205

 Score =  234 bits (598), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 82/204 (40%), Positives = 123/204 (60%), Gaps = 4/204 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   ++++K+GY AVQVG  + K K+ +K
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQVGFQDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F    V+PK+ L EF+  + +  L +G   +   F     VDV G + GKGF G 
Sbjct: 63  PLMGHFKKAGVTPKRHLAEFKDFETE--LNLGDTITVELFNDAAYVDVVGTSKGKGFQGV 120

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  + THG     R  GS G    P +VFK  +M G+MGG+RVT  NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTHNLQVLKV 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
             +  L+L+KG VPG  K S +++
Sbjct: 181 IPEHNLLLIKGSVPGC-KGSIVII 203


>gi|254527207|ref|ZP_05139259.1| ribosomal protein L3 [Prochlorococcus marinus str. MIT 9202]
 gi|221538631|gb|EEE41084.1| ribosomal protein L3 [Prochlorococcus marinus str. MIT 9202]
          Length = 217

 Score =  234 bits (598), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 80/208 (38%), Positives = 128/208 (61%), Gaps = 3/208 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +G  +PVT++    C+V   +T   +GY A+Q+G G +K K+
Sbjct: 1   MSIGILGKKLGMSQLFDDKGNAVPVTLIEAGPCRVTQLKTNALDGYTAIQIGYGVSKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SKP +G          K L E+RV++      +G+  +   F VGQ VD++G ++G+GF
Sbjct: 61  ISKPEKGHLLKSGEELLKHLKEYRVEETSS-YEIGNQITVKNFEVGQKVDISGKSMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRH F     +HG S +HR+ GSTG    PGR++  K+MAGR GG ++T K L V+
Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
            +DD++ L++VKG VPG    S + ++ 
Sbjct: 179 KIDDQKNLLVVKGSVPGKP-GSIVNIKP 205


>gi|126697087|ref|YP_001091973.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9301]
 gi|166233175|sp|A3PF47|RL3_PROM0 RecName: Full=50S ribosomal protein L3
 gi|126544130|gb|ABO18372.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9301]
          Length = 217

 Score =  234 bits (598), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 80/208 (38%), Positives = 128/208 (61%), Gaps = 3/208 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +G  +PVT++    C++   +T   +GY AVQ+G G +K K+
Sbjct: 1   MSIGILGKKLGMSQLFDEKGNSVPVTLIEAGPCRITQLKTTALDGYTAVQIGYGLSKDKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SKP +G          K L E+RV++      +G+  +   F VGQ VD++G ++G+GF
Sbjct: 61  ISKPEKGHLLKSGEELLKHLKEYRVEETSS-YEIGNQITVKNFEVGQKVDISGKSMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     +HG S +HR+ GSTG    PGR++  K+MAGR GG ++T K L V+
Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
            +DD++ L++VKG VPG    S I ++ 
Sbjct: 179 KIDDQKNLLVVKGSVPGKP-GSIINIKP 205


>gi|269798550|ref|YP_003312450.1| ribosomal protein L3 [Veillonella parvula DSM 2008]
 gi|282849864|ref|ZP_06259247.1| 50S ribosomal protein L3 [Veillonella parvula ATCC 17745]
 gi|294792794|ref|ZP_06757941.1| 50S ribosomal protein L3 [Veillonella sp. 6_1_27]
 gi|294794548|ref|ZP_06759684.1| 50S ribosomal protein L3 [Veillonella sp. 3_1_44]
 gi|313893076|ref|ZP_07826653.1| 50S ribosomal protein L3 [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|269095179|gb|ACZ25170.1| ribosomal protein L3 [Veillonella parvula DSM 2008]
 gi|282580301|gb|EFB85701.1| 50S ribosomal protein L3 [Veillonella parvula ATCC 17745]
 gi|294454878|gb|EFG23251.1| 50S ribosomal protein L3 [Veillonella sp. 3_1_44]
 gi|294456693|gb|EFG25056.1| 50S ribosomal protein L3 [Veillonella sp. 6_1_27]
 gi|313442429|gb|EFR60844.1| 50S ribosomal protein L3 [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 213

 Score =  234 bits (597), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 98/214 (45%), Positives = 132/214 (61%), Gaps = 5/214 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ +KLGMT V+  EG+ +PVTV+      VV  +T++ +GY AVQ+G G  K K+
Sbjct: 1   MSKAILGKKLGMTQVFTAEGQLVPVTVVETTPSVVVRVKTVETDGYEAVQIGYGSIKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP++G F    V+P K L E RV    D   VG   +   F  G+LVDV G   GKGF
Sbjct: 61  LTKPVKGQFDKAGVAPVKYLREVRVANAAD-YTVGQTLAADIFAEGELVDVVGTGKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KRHNF     THG S SHR  GS G       G+V+K KK+ G+MGG RVTV+ L 
Sbjct: 120 AGTIKRHNFSRGPETHG-SKSHREPGSIGPMISGGGGKVYKGKKLPGQMGGYRVTVQRLS 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VV VD +R L+LVKG +PGA K S ++VR++ K 
Sbjct: 179 VVKVDAERNLLLVKGGIPGA-KGSLVMVRNTVKP 211


>gi|238810297|dbj|BAH70087.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 276

 Score =  234 bits (597), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 81/217 (37%), Positives = 121/217 (55%), Gaps = 6/217 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++   G  +PVTV+ +    V    + DKNGY+A Q+  GE K   
Sbjct: 1   MMKGILGRKIGMTQIFTELGASVPVTVIEVQPNVVTKVLSADKNGYVATQIAVGEKKEHR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP++G F+    +PK+ + E R  +      +G     + F  G+LVD+TG + GKGF
Sbjct: 61  SNKPLKGQFAQAKTTPKRYVKEIRGMQG---YELGQTIKANIFKAGELVDITGTSKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KR N      +HG     +    TG   D    RVFK   M G +G  R TV+NLE
Sbjct: 118 AGTIKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVFKGMTMPGHLGAVRTTVQNLE 177

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           +V VD    ++LVKG +PGA KNS++++R++ K   N
Sbjct: 178 IVKVDVANNIMLVKGSIPGA-KNSYVMIREAVKGLPN 213


>gi|300728443|ref|ZP_07061805.1| ribosomal protein L3 [Prevotella bryantii B14]
 gi|299774362|gb|EFI70992.1| ribosomal protein L3 [Prevotella bryantii B14]
          Length = 204

 Score =  234 bits (597), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 88/205 (42%), Positives = 126/205 (61%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G GEAK KN SK
Sbjct: 3   GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKNTSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F     +PKK L EF+  ++   L +G   +   F   Q VDV G + GKGF G 
Sbjct: 63  PLMGTFKKAGTTPKKHLAEFKFDEE---LNLGDTLTVEIFNDAQFVDVVGTSKGKGFQGV 119

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  ++THG     R  GS G    P +VFK  +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLKVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  LILVKG V G   ++ ++ +
Sbjct: 180 IPEHNLILVKGSVAGCNGSTVLIEK 204


>gi|189183951|ref|YP_001937736.1| 50S ribosomal protein L3 [Orientia tsutsugamushi str. Ikeda]
 gi|189180722|dbj|BAG40502.1| 50S ribosomal protein L3 [Orientia tsutsugamushi str. Ikeda]
          Length = 227

 Score =  234 bits (597), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 109/211 (51%), Positives = 145/211 (68%), Gaps = 2/211 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           RSG++A KLGM+  ++  GR++ +T+L +D CQV+ H+ + K+GY AV +G        V
Sbjct: 16  RSGLIAEKLGMSSKFDENGRKVAITLLKVDVCQVLWHKLVSKDGYNAVILGYKNISPFKV 75

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KPMR  FS   + PK  + EF+V +D  +L + S+   SYF VGQ VDV G+TIGKGF+
Sbjct: 76  KKPMRSIFSRAKIEPKAVIKEFKVAEDR-MLEIASILDASYFRVGQYVDVRGITIGKGFA 134

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           GAMKRH F GL A+HGVSISHRSHGSTG R  PGR FKNKKMAG MG    T++NL+V S
Sbjct: 135 GAMKRHGFRGLEASHGVSISHRSHGSTGNRAYPGRTFKNKKMAGHMGVKFATIQNLKVDS 194

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VD ++ L+++KG +PG K  S + + DS K 
Sbjct: 195 VDLEKRLLVIKGSIPG-KSGSIVYITDSIKK 224


>gi|301168458|emb|CBW28048.1| 50S ribosomal protein L3 [Bacteriovorax marinus SJ]
          Length = 232

 Score =  234 bits (597), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 86/206 (41%), Positives = 120/206 (58%), Gaps = 2/206 (0%)

Query: 7   ARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
             K GMT +++  G  +PVTV+ L    V   +T++ +GY A QVG GE + K V KP +
Sbjct: 29  GVKAGMTRIFDENGNHVPVTVVKLIPNIVTQVKTVETDGYEAYQVGYGEKREKLVKKPTK 88

Query: 67  GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKR 126
           G     NVS     F     +      +G   S + FT    VDVTG+T GKGF G MKR
Sbjct: 89  GHLKKANVSANLTKFAEIKNETVSTDDLGKELSVANFTPETYVDVTGVTKGKGFQGVMKR 148

Query: 127 HNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKR 186
           +NF G  A+HG    HR++GS G R  PGRVFK KKM G MG  + TV+N++VV V+ ++
Sbjct: 149 YNFAGGPASHGSH-FHRTNGSIGNRATPGRVFKLKKMPGHMGAVKQTVQNVKVVEVNTEK 207

Query: 187 GLILVKGCVPGAKKNSWILVRDSFKS 212
           G +L+KG +PG+ KN ++ +  + K 
Sbjct: 208 GYMLIKGSLPGS-KNGFVKIAKALKK 232


>gi|331703716|ref|YP_004400403.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328802271|emb|CBW54425.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 223

 Score =  233 bits (596), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 127/211 (60%), Gaps = 8/211 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+ MT V+   G+ +PVTV+ +    V+  +T+D +GY+AVQ+G  + +V  V+
Sbjct: 2   KGILGRKVEMTQVFTNSGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121
           KP  G F   N +PK+ + E R   +     +G V +    F  G+ VDVTG++ GKGF+
Sbjct: 62  KPELGHFKKANSNPKRFVKEIR---NMQGYELGQVINVSDIFVSGEYVDVTGISKGKGFA 118

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHN+      HG S  HR  GS G      R+FK+KKM G MG  + T++NLE+++
Sbjct: 119 GGIKRHNYARGPMAHG-SGYHRGIGSMGAI--INRIFKSKKMPGHMGNAKRTIQNLEIIA 175

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +D    ++L+KG +PG  KNS++ ++ + K 
Sbjct: 176 IDQPNNIMLIKGSIPGP-KNSFVQIKQNIKG 205


>gi|308814220|ref|XP_003084415.1| putative ribosomal protein L3 (ISS) [Ostreococcus tauri]
 gi|116056300|emb|CAL56683.1| putative ribosomal protein L3 (ISS) [Ostreococcus tauri]
          Length = 312

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 99/220 (45%), Positives = 128/220 (58%), Gaps = 3/220 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVKN 60
           R+G +  K GMT  ++  G R  +TV+ LD  +VV     D  NGY AVQ+G G  K K 
Sbjct: 61  RTGAIGIKCGMTADWDARGCRHALTVVWLDGVEVVRRTGRDGANGYDAVQIGYGARKAKG 120

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G F       K+ L EFRV +   L P G+V + ++F  GQ VDV G T GKGF
Sbjct: 121 VTKAELGHFVRHGSGIKRGLKEFRVSRCGTLTP-GTVITAAHFAAGQYVDVGGTTKGKGF 179

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G MKR  F G  ATHG +  HR+HGS G  QDPGRVFK KKMAGRMGG R TV++  V 
Sbjct: 180 QGPMKRWGFAGQPATHGNTKKHRAHGSIGQCQDPGRVFKGKKMAGRMGGRRRTVQSAYVW 239

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
            VD +R L+ +KG +PG    + + +RD+ +       +V
Sbjct: 240 KVDTERNLLYIKGQIPGGA-GTAVTIRDALRKPPKLGEQV 278


>gi|73990569|ref|XP_534263.2| PREDICTED: similar to Mitochondrial 39S ribosomal protein L3 (L3mt)
           (MRP-L3) [Canis familiaris]
          Length = 456

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 77/216 (35%), Positives = 115/216 (53%), Gaps = 5/216 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGY-MAVQVGAGEAKVK 59
           R G++A KLGM  ++  +G+R  VT+L + +C V+ +   +  NG   A+ VG       
Sbjct: 204 RVGLIALKLGMMPLWTKDGKRHVVTLLQVQDCHVLKYTPKENHNGKMAALTVGGKTVSRF 263

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           + S  +  F+  + + PK+K+  F V  D+ ++  G+    ++F  GQ VDVT  TIGKG
Sbjct: 264 HKSTSVLEFYQELGLPPKQKVKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 322

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR  F G  ATHG + +HR  G+     D  RV+   KM G+MG    T   L+V
Sbjct: 323 FQGVMKRWGFKGQPATHGQTKTHRRPGAI-STGDVARVWPGTKMPGQMGNKDRTEYGLKV 381

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             ++ K  +I V G VPG  +N  + +RDS   A  
Sbjct: 382 WRINTKNNIIYVNGSVPG-HRNCLVKIRDSNLPAYK 416


>gi|302307337|ref|NP_983967.2| ADL129Wp [Ashbya gossypii ATCC 10895]
 gi|299788953|gb|AAS51791.2| ADL129Wp [Ashbya gossypii ATCC 10895]
          Length = 267

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 97/217 (44%), Positives = 145/217 (66%), Gaps = 2/217 (0%)

Query: 1   MRSGVVARKLGMTCVYNI-EGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R GV+ RK+GM   +++  G R+  TVL ++N +VV+ +T+  NGY A QVG G     
Sbjct: 50  LRCGVLTRKVGMMPYFDVATGARMAATVLEMNNVEVVLQKTVAANGYWACQVGYGNKHPS 109

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            V++ + G F+S  V+PK+K+ EFRV+ ++ LLPVG++  PS+F+ GQ VD+  ++ GKG
Sbjct: 110 KVTRQLLGHFASKEVNPKEKVTEFRVKNEEGLLPVGTLLKPSFFSPGQYVDLRSVSKGKG 169

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR+NF G +A+HG S+SHR  GS G  Q PGR+   KKM G MG  RVT++N++V
Sbjct: 170 FQGVMKRYNFKGQKASHGNSLSHRKGGSYGQNQTPGRILPGKKMPGHMGVQRVTIQNVQV 229

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           + V D +G+I+VKG V G  K +++ V+D+ K     
Sbjct: 230 LEVQDSKGVIIVKGSVAGP-KGAFVKVQDAIKKPPTA 265


>gi|126341656|ref|XP_001379787.1| PREDICTED: similar to Mitochondrial ribosomal protein L3
           [Monodelphis domestica]
          Length = 448

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 75/217 (34%), Positives = 114/217 (52%), Gaps = 5/217 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYM--AVQVGAGEAKV 58
           +R G++A KLGM  ++  +G++  VT+L + +C V+ +   ++      A+ VG      
Sbjct: 194 VRVGLIAAKLGMMPLWTKDGKKFVVTLLQVQDCHVLKYTPKEECNRNRGALIVGGKNVSP 253

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
              S+ +   +  V V PK+K   FRV  D+ ++  G+    ++F  GQ VDVT  TIGK
Sbjct: 254 FYKSESLMQMYREVGVPPKQKFSTFRVT-DNAIIKPGTPLYAAHFRPGQYVDVTAKTIGK 312

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G MKR  F G  A+HG + +HR  G+     D  RV+  KKM G+MG    T   L+
Sbjct: 313 GFQGVMKRWGFKGQPASHGQTKTHRRPGAI-ATGDIARVWPGKKMPGKMGNRYRTEFGLK 371

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           V  ++ K  +I V G VPG  +N  + +RDS      
Sbjct: 372 VWRINTKHDIIYVNGSVPG-HRNCLVKIRDSILPPYK 407


>gi|260592765|ref|ZP_05858223.1| 50S ribosomal protein L3 [Prevotella veroralis F0319]
 gi|260535296|gb|EEX17913.1| 50S ribosomal protein L3 [Prevotella veroralis F0319]
          Length = 204

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 86/205 (41%), Positives = 124/205 (60%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G GEAK K  SK
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G F     SPKK L EF+  ++     +G   +   F   + VDV G + GKGF G 
Sbjct: 63  PQQGHFKKAGTSPKKHLAEFKFDEE---YNLGDTITVELFNDVKFVDVVGTSKGKGFQGV 119

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  ++THG     R  GS G    P +VFK  +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  LILVKG V G   ++ I+ +
Sbjct: 180 IPEHNLILVKGSVAGCNGSTVIIKK 204


>gi|300812343|ref|ZP_07092778.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496648|gb|EFK31735.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 209

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 80/213 (37%), Positives = 120/213 (56%), Gaps = 5/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  +PVTV+      V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGRKVGMTQIFTKDGVLVPVTVIEATPNVVMQVKTVENDGYEAVQLGYQDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G       SPK+ + E R  +  D   VGS  +   F  G +V+VTG + G G+
Sbjct: 61  SNKPEKGHADKAKTSPKRFIRELRGVELSD-YEVGSETTVETFKEGDVVNVTGTSRGHGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH+      THG S  HR  GS G      RV K KK+ G MG   VT++NL V 
Sbjct: 120 QGNIKRHHQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKKLPGHMGVKTVTIENLVVE 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V   + ++++KG VPGA KNS I+V+ S K++
Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIIVKSSAKAS 208


>gi|94987402|ref|YP_595335.1| 50S ribosomal protein L3 [Lawsonia intracellularis PHE/MN1-00]
 gi|123385030|sp|Q1MPR3|RL3_LAWIP RecName: Full=50S ribosomal protein L3
 gi|94731651|emb|CAJ55014.1| 50S ribosomal protein L3 [Lawsonia intracellularis PHE/MN1-00]
          Length = 210

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 90/205 (43%), Positives = 127/205 (61%), Gaps = 1/205 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           + G++ +KLGMT V+   G  +PVTV+    C +V  +T++K GY A+Q+  GE K K+V
Sbjct: 4   KIGILGQKLGMTQVFGGNGFAVPVTVVQAGPCPIVQIKTVEKEGYNALQIAFGEGKKKHV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SK M+G FS   +S  +K+ E R++       VG V +   F+VG  V +TG +IGKGF 
Sbjct: 64  SKSMQGHFSKAGLSLYRKIQEVRLKGSLTSYEVGQVLTVGLFSVGDKVKITGKSIGKGFQ 123

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           GAM+R NF G + +HG    HR+ GS G    PG VFK KKMAG  G  +VTV+NL VV 
Sbjct: 124 GAMRRWNFAGSKDSHGCEKVHRAAGSIGNNTFPGHVFKGKKMAGHWGTEKVTVQNLVVVD 183

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           +  +  +IL+ G VPG  KNS++ +
Sbjct: 184 IRPEDNIILIHGSVPGP-KNSFLFI 207


>gi|238855068|ref|ZP_04645396.1| 50S ribosomal protein L3 [Lactobacillus jensenii 269-3]
 gi|256852036|ref|ZP_05557423.1| 50S ribosomal protein L3 [Lactobacillus jensenii 27-2-CHN]
 gi|260661395|ref|ZP_05862308.1| 50S ribosomal protein L3 [Lactobacillus jensenii 115-3-CHN]
 gi|260664853|ref|ZP_05865704.1| 50S ribosomal protein L3 [Lactobacillus jensenii SJ-7A-US]
 gi|282933636|ref|ZP_06339001.1| 50S ribosomal protein L3 [Lactobacillus jensenii 208-1]
 gi|282934051|ref|ZP_06339333.1| 50S ribosomal protein L3 [Lactobacillus jensenii 208-1]
 gi|297205089|ref|ZP_06922485.1| 50S ribosomal protein L3 [Lactobacillus jensenii JV-V16]
 gi|313472595|ref|ZP_07813084.1| 50S ribosomal protein L3 [Lactobacillus jensenii 1153]
 gi|238832312|gb|EEQ24621.1| 50S ribosomal protein L3 [Lactobacillus jensenii 269-3]
 gi|256615448|gb|EEU20638.1| 50S ribosomal protein L3 [Lactobacillus jensenii 27-2-CHN]
 gi|260547850|gb|EEX23827.1| 50S ribosomal protein L3 [Lactobacillus jensenii 115-3-CHN]
 gi|260561336|gb|EEX27309.1| 50S ribosomal protein L3 [Lactobacillus jensenii SJ-7A-US]
 gi|281301883|gb|EFA94145.1| 50S ribosomal protein L3 [Lactobacillus jensenii 208-1]
 gi|281302241|gb|EFA94478.1| 50S ribosomal protein L3 [Lactobacillus jensenii 208-1]
 gi|297149667|gb|EFH29964.1| 50S ribosomal protein L3 [Lactobacillus jensenii JV-V16]
 gi|313448952|gb|EFR61270.1| 50S ribosomal protein L3 [Lactobacillus jensenii 1153]
          Length = 209

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 81/212 (38%), Positives = 118/212 (55%), Gaps = 5/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  +PVTV+      V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGRKVGMTQIFTDKGVLVPVTVIEATPNVVMQVKTVESDGYEAVQLGYQDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G       SPK+ + E R  +  D   VGS  +   F  G +VDVTG T G G+
Sbjct: 61  SNKPEKGHADKAKTSPKRFIREIRGVELKD-YEVGSEVTVDTFKEGDVVDVTGTTRGHGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH       THG S  HR  GS G      RV K KK+ G MG   VT++NL + 
Sbjct: 120 QGNIKRHGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKKLPGHMGVKTVTIQNLVIE 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V   + ++LVKG VPGA K+S I+V+ + K+
Sbjct: 177 KVVADKNVLLVKGNVPGA-KDSLIVVKSATKA 207


>gi|157414163|ref|YP_001485029.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9215]
 gi|166990938|sp|A8G762|RL3_PROM2 RecName: Full=50S ribosomal protein L3
 gi|157388738|gb|ABV51443.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9215]
          Length = 217

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 80/208 (38%), Positives = 128/208 (61%), Gaps = 3/208 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +G  +PVT++    C+V   +T   +GY A+Q+G G +K K+
Sbjct: 1   MSIGILGKKLGMSQLFDDKGNAVPVTLIEAGPCRVTQLKTNALDGYTAIQIGYGVSKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SKP +G          K L E+RV++      +G+  +   F VGQ VD++G ++G+GF
Sbjct: 61  ISKPEKGHLLKSGEELLKHLKEYRVEETSS-YEIGNQITVKNFEVGQKVDISGKSMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRH F     +HG S +HR+ GSTG    PGR++  K+MAGR GG ++T K L V+
Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
            +DD++ L++VKG VPG    S + ++ 
Sbjct: 179 KIDDQKNLLVVKGSVPGKP-GSIVNIKP 205


>gi|311748514|ref|ZP_07722299.1| 50S ribosomal protein L3 [Algoriphagus sp. PR1]
 gi|126577030|gb|EAZ81278.1| 50S ribosomal protein L3 [Algoriphagus sp. PR1]
          Length = 210

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 83/208 (39%), Positives = 121/208 (58%), Gaps = 5/208 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++ +GR +  T++    C V   + ++ +GY AVQ+  GE K KN  
Sbjct: 2   SGIIGKKVGMTSIFSADGRNVACTLIEAGPCVVTQVKNVETDGYNAVQLAYGERKEKNTP 61

Query: 63  KPMRGFFSSVNVSPKKK---LFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           KP+ G F     +PK+K     EFRV+ +  +    +V S   F  G  VD  G + GKG
Sbjct: 62  KPLIGHFKKAGTTPKQKVVEFREFRVEFEGQVDLGATVKSSEVFVEGDFVDAIGTSKGKG 121

Query: 120 FSGAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           F G +KRH F G   +THG     R  GS G    P RVFK  +MAGR GG+RV V NL+
Sbjct: 122 FQGVVKRHGFAGVGGSTHGQHNRQRHPGSIGACSWPSRVFKGMRMAGRTGGDRVKVINLK 181

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILV 206
           V+ +  ++ L+LV G VPG  KNS++++
Sbjct: 182 VLKIYPEQNLLLVSGSVPGP-KNSFVIL 208


>gi|78780035|ref|YP_398147.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9312]
 gi|109893536|sp|Q318I4|RL3_PROM9 RecName: Full=50S ribosomal protein L3
 gi|78713534|gb|ABB50711.1| LSU ribosomal protein L3P [Prochlorococcus marinus str. MIT 9312]
          Length = 217

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 78/208 (37%), Positives = 128/208 (61%), Gaps = 3/208 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +KLGM+ +++ +G  +PVT++    C+V   +T   +GY AVQ+G G +K K+
Sbjct: 1   MSIGILGKKLGMSQLFDDKGNAVPVTLIEAGPCRVTQLKTTTLDGYSAVQIGYGLSKDKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP +G          K L E+RV++      +G+  +   F VGQ VD++G ++G+GF
Sbjct: 61  INKPEKGHLLKSGEELLKHLKEYRVEETTS-YEIGNQITVKNFEVGQKVDISGKSMGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G  KRH F     +HG S +HR+ GSTG    PGR++  K+MAGR GG ++T K L V+
Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
            +DD++ L+++KG VPG    S + ++ 
Sbjct: 179 KIDDQKNLLVIKGSVPGKP-GSIVNIKP 205


>gi|78189807|ref|YP_380145.1| 50S ribosomal protein L3 [Chlorobium chlorochromatii CaD3]
 gi|109893419|sp|Q3APH3|RL3_CHLCH RecName: Full=50S ribosomal protein L3
 gi|78172006|gb|ABB29102.1| LSU ribosomal protein L3P [Chlorobium chlorochromatii CaD3]
          Length = 209

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 88/207 (42%), Positives = 123/207 (59%), Gaps = 1/207 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT ++N +   +  TV+   +C V   +  DK GY A QV  GE K + VSKP
Sbjct: 4   ILGKKIGMTRLFNEKREAVSCTVIEAGSCFVTQIKRTDKEGYDAYQVSYGERKEQKVSKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           ++G +    V+P   L EF   + +  L VGS  S   F VG+ V+V G++ GKGF+G +
Sbjct: 64  LQGHYKKAGVTPGYTLVEFSFAELNQELAVGSQVSVEGFNVGEKVNVLGVSKGKGFAGVV 123

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR+NFGG   THG S   R+ GS G   DP RVFK  +MAGR G   +TVKNLE+  V  
Sbjct: 124 KRYNFGGGSRTHGQSDRLRAPGSVGGSSDPSRVFKGTRMAGRKGSANITVKNLEIFKVMP 183

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
           +  LI+VKG +PG   NS++ +  S K
Sbjct: 184 ESNLIVVKGSIPGPN-NSYVKIISSKK 209


>gi|302415769|ref|XP_003005716.1| 54S ribosomal protein L9 [Verticillium albo-atrum VaMs.102]
 gi|261355132|gb|EEY17560.1| 54S ribosomal protein L9 [Verticillium albo-atrum VaMs.102]
          Length = 337

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 98/219 (44%), Positives = 141/219 (64%), Gaps = 3/219 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+GV+A K GMT V+ +  +R+P TVL LD  QV+  RT   +GY AVQVG G+ + +N
Sbjct: 80  LRTGVLAIKKGMTSVF-VGKKRVPATVLQLDQVQVLASRTRATHGYWAVQVGLGQKEPRN 138

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++P+ G+F +  V PK+ + EFRV+ +D LLPVG+   P +F  GQ VDV   + G+GF
Sbjct: 139 VTRPLLGYFEARGVFPKRHIAEFRVKGEDGLLPVGAQLRPDWFQKGQYVDVRSNSRGQGF 198

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179
           +G MKRH F G  A+HG S +HR+ G+ G  Q  G RV   KKM GRMG  + TV+NL V
Sbjct: 199 AGGMKRHGFAGQPASHGNSKNHRTMGTAGPSQGSGSRVLPGKKMPGRMGNQQTTVQNLTV 258

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           +SVD++ G+++V G V G  K   + ++D+ K     + 
Sbjct: 259 LSVDNELGIVVVSGPVAGP-KGCVVKLQDAVKRKAPTQP 296


>gi|302036665|ref|YP_003796987.1| 50S ribosomal protein L3 [Candidatus Nitrospira defluvii]
 gi|300604729|emb|CBK41061.1| 50S ribosomal protein L3 [Candidatus Nitrospira defluvii]
          Length = 206

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 86/212 (40%), Positives = 119/212 (56%), Gaps = 6/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M +G++ +KLGMT VY+      PVTV+    C+VV  +T +++GY AVQ+  GE K + 
Sbjct: 1   MTNGLLGKKLGMTQVYDES-VLAPVTVIEAGPCRVVSVKTKERDGYEAVQLSFGEVKEQR 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +S+   G       +P + L EF    D   + VG       F  G  VDV G++ GKGF
Sbjct: 60  LSRGELGHLKKHQAAPSRWLREFPKVGD---VTVGQTVKVDMFKKGDWVDVVGVSKGKGF 116

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G ++RHN+ G   THG S+ HR+ GS G    P RV+KNK + G MG  RVTV+ L+VV
Sbjct: 117 QGVVRRHNYAGGPETHG-SMFHRAPGSIGASSYPSRVWKNKALPGHMGDERVTVQRLKVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
                  L+ V+G VPG   N  ++VR S KS
Sbjct: 176 DARPDENLLFVRGAVPGGV-NGLLIVRKSKKS 206


>gi|296120747|ref|YP_003628525.1| ribosomal protein L3 [Planctomyces limnophilus DSM 3776]
 gi|296013087|gb|ADG66326.1| ribosomal protein L3 [Planctomyces limnophilus DSM 3776]
          Length = 245

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 90/230 (39%), Positives = 128/230 (55%), Gaps = 22/230 (9%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  +G  IPVTV+    C V+  RT++++GY AVQ+G  +   + 
Sbjct: 14  MSCGLLGRKVGMTQVFTPQGEAIPVTVIECGPCVVLQIRTVERDGYSAVQLGFSDKPRRL 73

Query: 61  VSKPMRGFFS-------------------SVNVSPKKKLFEFRVQKDD-DLLPVGSVFSP 100
            S+  RG  +                     +  PK+ + EFRV  ++     VG V + 
Sbjct: 74  ASRSERGHVAAIDSKRRKSLAAAGVALAEKADCEPKRFVREFRVTPEEASAFTVGQVLTV 133

Query: 101 S-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
           S  F   + VDV G + G+GF+G MKRHNF G  A+HGV   HRS GSTG   DPG+VFK
Sbjct: 134 SQIFGEVKHVDVVGTSKGRGFAGVMKRHNFHGTCASHGVKKVHRSGGSTGQSTDPGKVFK 193

Query: 160 NKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
             KM G  G  +VTV+ L+VV  DD+  ++LV+G VPG     ++ VR +
Sbjct: 194 GTKMPGHYGDAQVTVRRLQVVRADDENNVLLVRGAVPG-YSGGFVRVRKT 242


>gi|270157910|ref|ZP_06186567.1| ribosomal protein L3 [Legionella longbeachae D-4968]
 gi|289163830|ref|YP_003453968.1| 50S ribosomal subunit protein L3 [Legionella longbeachae NSW150]
 gi|269989935|gb|EEZ96189.1| ribosomal protein L3 [Legionella longbeachae D-4968]
 gi|288857003|emb|CBJ10817.1| 50S ribosomal subunit protein L3 [Legionella longbeachae NSW150]
          Length = 216

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 93/218 (42%), Positives = 130/218 (59%), Gaps = 3/218 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  +G  +PV+V+ +   +V   +T+  +GY A+Q+  G  K   
Sbjct: 1   MMIGLLGRKIGMTRVFMADGVSVPVSVVEVHPNRVSQVKTITTDGYSAIQLTGGAKKPGK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119
           V+KP+ G F+   +     L EF V  + D    G V S    FT GQ VDV+G T GKG
Sbjct: 61  VNKPLTGHFAKAEIEAGDMLVEFPVDSE-DKFTAGQVISITDVFTAGQFVDVSGTTKGKG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G +KR+NF    ATHG S SHR  GS G  Q PGRVFK KKMAG MG  R TV++LE+
Sbjct: 120 FAGTVKRYNFRTQDATHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNVRCTVQSLEL 179

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           V VD +R L+L+KG +PGA   + + ++ + K     +
Sbjct: 180 VRVDAERNLLLIKGAIPGAP-GTRVEIKPAAKKQARGE 216


>gi|282858374|ref|ZP_06267554.1| 50S ribosomal protein L3 [Prevotella bivia JCVIHMP010]
 gi|282588822|gb|EFB93947.1| 50S ribosomal protein L3 [Prevotella bivia JCVIHMP010]
          Length = 204

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 83/205 (40%), Positives = 124/205 (60%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G GEAK K  SK
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G F     +PKK L EF+  ++     +G   +   F   + VDV G + GKGF G 
Sbjct: 63  PQQGHFKKAGTTPKKHLAEFKFDEE---YNLGDTITVELFNDTKFVDVVGTSKGKGFQGV 119

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  ++THG     R  GS G    P +VFK  +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  ++LVKG V G   ++ I+ +
Sbjct: 180 IPEHNILLVKGSVAGCNGSTVIIEK 204


>gi|104773542|ref|YP_618522.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116513539|ref|YP_812445.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|122275691|sp|Q04C15|RL3_LACDB RecName: Full=50S ribosomal protein L3
 gi|122984010|sp|Q1GBL8|RL3_LACDA RecName: Full=50S ribosomal protein L3
 gi|103422623|emb|CAI97231.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116092854|gb|ABJ58007.1| LSU ribosomal protein L3P [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|325125175|gb|ADY84505.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
 gi|325684720|gb|EGD26874.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 209

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 80/213 (37%), Positives = 120/213 (56%), Gaps = 5/213 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  +PVTV+      V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGRKVGMTQIFTKDGVLVPVTVIEATPNVVMQVKTVENDGYEAVQLGYQDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G       SPK+ + E R  +  D   VGS  +   F  G +V+VTG + G G+
Sbjct: 61  SNKPEKGHADKAKTSPKRFIRELRGVELSD-YEVGSEVTVETFKEGDVVNVTGTSRGHGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH+      THG S  HR  GS G      RV K KK+ G MG   VT++NL V 
Sbjct: 120 QGNIKRHHQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKKLPGHMGVKTVTIENLVVE 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            V   + ++++KG VPGA KNS I+V+ S K++
Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIVVKSSAKAS 208


>gi|307565148|ref|ZP_07627656.1| 50S ribosomal protein L3 [Prevotella amnii CRIS 21A-A]
 gi|307346179|gb|EFN91508.1| 50S ribosomal protein L3 [Prevotella amnii CRIS 21A-A]
          Length = 204

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 83/205 (40%), Positives = 125/205 (60%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G GEAK K  SK
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P++G F     +PKK L EF+  ++     +G   +   F   + VDV G + GKGF G 
Sbjct: 63  PLQGHFKKAGTTPKKHLAEFKFDEE---YNLGDTITVELFNDTKYVDVVGTSKGKGFQGV 119

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  ++THG     R  GS G    P +VFK  +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  ++LVKG V G   ++ I+ +
Sbjct: 180 IPEHNILLVKGSVAGCNGSTVIIEK 204


>gi|258591316|emb|CBE67615.1| 50S ribosomal subunit protein L3 [NC10 bacterium 'Dutch sediment']
          Length = 210

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 86/208 (41%), Positives = 123/208 (59%), Gaps = 4/208 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG-EAKVK 59
           M  G++ +K+GMT ++   G  +PVT++    C +V  RT   +GY AVQ+G   E K +
Sbjct: 1   MGIGLLGKKVGMTQLFGESGNAVPVTIIEAGPCPIVQLRTSSTDGYEAVQIGYRAERKTR 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
            ++KP++G F    V+P+K L EFR+  +D     VG + +   F  G+ V VTG+T GK
Sbjct: 61  RIAKPLKGHFDKAKVTPQKYLREFRLKTQDSSKYTVGEILTVGLFEAGEKVQVTGITKGK 120

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G +KR  + G   THG S+ HR+ GS G    P RVFK   M GRMG +R TVK L+
Sbjct: 121 GFQGGVKRWGYLGGPETHG-SMFHRAPGSIGASSFPSRVFKGHHMPGRMGTDRATVKGLQ 179

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILV 206
           VV +  ++ L+LVKG VPG    S + +
Sbjct: 180 VVKILPEQNLVLVKGAVPGPA-GSVVTI 206


>gi|116748990|ref|YP_845677.1| 50S ribosomal protein L3 [Syntrophobacter fumaroxidans MPOB]
 gi|166990941|sp|A0LIJ0|RL3_SYNFM RecName: Full=50S ribosomal protein L3
 gi|116698054|gb|ABK17242.1| LSU ribosomal protein L3P [Syntrophobacter fumaroxidans MPOB]
          Length = 210

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   +V RKL M+ ++  +G  +P+T++    C V   +T +++GY A+Q+G G  K KN
Sbjct: 1   MIKAIVGRKLQMSQIFAEDGTAVPITLIQAGPCTVTQVKTPERDGYSALQIGFGSRKPKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+G    V     + L E R++   D   VG   +   F +G+ +DV G T GKG+
Sbjct: 61  VNKPMKGHLDKVGKGYFEVLREIRMENASDH-EVGEDLAADVFEIGERIDVIGTTKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR  F    + HG S + R  GSTG    PGRV K KKM G+ G  R TV NL ++
Sbjct: 120 AGTIKRWGFQRGPSGHG-SKNIREPGSTGNATFPGRVIKGKKMPGQKGNKRTTVMNLRII 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            V  +  L++VKG VPG++ N  +L+R + ++
Sbjct: 179 DVRPEENLLIVKGAVPGSQ-NGIVLIRKTNRA 209


>gi|90075128|dbj|BAE87244.1| unnamed protein product [Macaca fascicularis]
          Length = 348

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 78/221 (35%), Positives = 116/221 (52%), Gaps = 5/221 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKV 58
            R G++A KLGM  ++  +G +  VT+L + +C V+ + + +  NG  A + VG      
Sbjct: 95  FRVGLIALKLGMMPLWTKDGEKHVVTLLQVQDCHVLKYTSKENHNGKTAALSVGGKTVSR 154

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
              + P+  F+  + + PK+ +  F +  +  + P G+    ++F  GQ VDVT  TIGK
Sbjct: 155 FRKATPVLEFYRELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGK 213

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G +KR  F G  ATHG + +HR  G+     D GRV+   KM G+MG    T   L+
Sbjct: 214 GFQGVVKRWGFKGQPATHGQTKTHRRPGAL-STGDIGRVWPGTKMPGKMGNIYRTAYGLK 272

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           V  ++ K  +I V G VPG  KN  + VRDS   A    GK
Sbjct: 273 VWRINTKHNIIYVNGSVPG-HKNCLVKVRDSKLPAYKDLGK 312


>gi|83319916|ref|YP_424660.1| 50S ribosomal protein L3 [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|90110058|sp|P10134|RL3_MYCCT RecName: Full=50S ribosomal protein L3
 gi|83283802|gb|ABC01734.1| 50 ribosomal protein L3 [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 223

 Score =  233 bits (594), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 80/217 (36%), Positives = 129/217 (59%), Gaps = 8/217 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+ MT V+   G+ +PVTV+ +    V+  +T+D +GY+AVQ+G  + +V  V+
Sbjct: 2   KGILGRKVEMTQVFTNSGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121
           KP  G F   N +PK+ + E R   +     +G V +    F  G+ VDVTG++ GKGF+
Sbjct: 62  KPELGHFKKANSNPKRFVKEIR---NMQGYEIGQVINVSDIFVSGEYVDVTGISKGKGFA 118

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHN+      HG S  HR  GS G      R+FK+KKM G MG  + T++NLE+++
Sbjct: 119 GGIKRHNYSRGPMAHG-SGYHRGIGSMGAI--INRIFKSKKMPGHMGNAKRTIQNLEIIA 175

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           +D    ++L+KG +PG  KNS++ ++ + K   + + 
Sbjct: 176 IDQSNNIMLIKGSIPGP-KNSFVQIKQNVKGMSSKQA 211


>gi|281351379|gb|EFB26963.1| hypothetical protein PANDA_011694 [Ailuropoda melanoleuca]
          Length = 317

 Score =  233 bits (594), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 78/216 (36%), Positives = 116/216 (53%), Gaps = 5/216 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGY-MAVQVGAGEAKVK 59
           R G++A KLGM  ++  +GR+  VT+L + +C V+ +   +  NG   A+ VG   A   
Sbjct: 66  RVGLIALKLGMMPLWTKDGRKHVVTLLQVQDCHVLKYTPKENHNGKMAALTVGGKTASRF 125

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           + S  +  F+  + + PK+K+  F V  D+ ++  G+    ++F  GQ VDVT  TIGKG
Sbjct: 126 HKSTSVLEFYQELGLPPKQKVKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 184

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR  F G  ATHG + +HR  G+     D  R++   KM G+MG    T   L+V
Sbjct: 185 FQGVMKRWGFKGQPATHGQTKTHRRPGAI-STGDVARIWPGTKMPGQMGNRDRTAYGLKV 243

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             ++ K  +I V G VPG  KN  + +RDS   A  
Sbjct: 244 WRINTKHNVIYVNGSVPG-HKNCLVKIRDSNLPAYK 278


>gi|313665577|ref|YP_004047448.1| 50S ribosomal protein L3 [Mycoplasma leachii PG50]
 gi|312949526|gb|ADR24122.1| 50S ribosomal protein L3 [Mycoplasma leachii PG50]
          Length = 223

 Score =  233 bits (594), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 80/217 (36%), Positives = 129/217 (59%), Gaps = 8/217 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+ MT V+   G+ +PVTV+ +    V+  +T+D +GY+AVQ+G  + +V  V+
Sbjct: 2   KGILGRKVEMTQVFTNSGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121
           KP  G F   N +PK+ + E R   +     +G V +    F  G+ VDVTG++ GKGF+
Sbjct: 62  KPELGHFKKANSNPKRFVKEIR---NMQGYEIGQVINVSDIFVSGEYVDVTGISKGKGFA 118

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHN+      HG S  HR  GS G      R+FK+KKM G MG  + T++NLE+++
Sbjct: 119 GGIKRHNYSRGPMAHG-SGYHRGIGSMGAI--INRIFKSKKMPGHMGNAKRTIQNLEIIA 175

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           +D    ++L+KG +PG  KNS++ ++ + K   + + 
Sbjct: 176 IDQTNNIMLIKGSIPGP-KNSFVQIKQNVKGMSSKQA 211


>gi|237755896|ref|ZP_04584489.1| 50S ribosomal protein L3 [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691946|gb|EEP60961.1| 50S ribosomal protein L3 [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 226

 Score =  233 bits (594), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 96/221 (43%), Positives = 132/221 (59%), Gaps = 6/221 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+ + G+ IPVTV+    C VV  RT +K+GY AV +  GE K KN
Sbjct: 1   MPKGIIGKKIGMTRVF-VNGKAIPVTVIQAGPCNVVYTRTQEKDGYNAVALAFGERKEKN 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119
             KP+   F   N+ P K + EF + KD + + +G        F  G LVD+TG + G+G
Sbjct: 60  TPKPLLAIFKKANIKPAKVIKEFPL-KDGETVELGQEIRIENVFEKGDLVDITGKSKGRG 118

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+  MKR +F G   +HG    HR+ GS GCR +PGRV+K K+MAG  G   VTV  LEV
Sbjct: 119 FTSVMKRWDFAGFPKSHG-HRYHRAVGSIGCRTEPGRVWKTKRMAGHYGNETVTVLGLEV 177

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
           V +  ++ +ILVKG VPGA  NS + ++ S   A   KGK+
Sbjct: 178 VDIIPEKNVILVKGSVPGAP-NSIVFLKQSV-IANRRKGKL 216


>gi|296228094|ref|XP_002759662.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like isoform 1
           [Callithrix jacchus]
          Length = 376

 Score =  233 bits (594), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 80/216 (37%), Positives = 117/216 (54%), Gaps = 5/216 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGY-MAVQVGAGEAKVK 59
           R G+VA KLGM  ++  +G+R  VT+L + +C V+ + + +  +G   A+ VG       
Sbjct: 124 RVGLVAVKLGMMPLWTKDGQRHVVTLLQVRDCHVLKYISKENHDGKMAALSVGGKTVSRF 183

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           + S  +  F+  + + PK+K+  FR+  +  L P G+    ++F  GQ VDVT  TIGKG
Sbjct: 184 HKSTQILEFYRELGLPPKQKVKIFRITDNAALKP-GTPLYAAHFRPGQYVDVTAKTIGKG 242

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR  F G  ATHG + +HR  G+     D  RV+   K+ G+MG    TV  L+V
Sbjct: 243 FQGVMKRWGFKGQPATHGQTKTHRRPGAI-STGDVARVWPGTKLPGQMGNIDRTVHGLKV 301

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             ++ K  +I V G VPG  KN  + VRDS   A  
Sbjct: 302 WRINTKHNIIYVNGSVPG-HKNCLVKVRDSKLPAYK 336


>gi|256383913|gb|ACU78483.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|256384744|gb|ACU79313.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|296455991|gb|ADH22226.1| 50S ribosomal protein L3 [synthetic Mycoplasma mycoides
           JCVI-syn1.0]
          Length = 223

 Score =  233 bits (594), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 127/211 (60%), Gaps = 8/211 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+ MT V+   G+ +PVTV+ +    V+  +T+D +GY+AVQ+G  + +V  V+
Sbjct: 2   KGILGRKVEMTQVFTSAGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121
           KP  G F   N +PK+ + E R   +     +G V +    F  G+ VDVTG++ GKGF+
Sbjct: 62  KPELGHFKKANSNPKRFVKEIR---NMQGYELGQVINVSDIFVSGEYVDVTGISKGKGFA 118

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHN+      HG S  HR  GS G      R+FK+KKM G MG  + T++NLE+++
Sbjct: 119 GGIKRHNYARGPMAHG-SGYHRGIGSMGAI--INRIFKSKKMPGHMGNAKRTIQNLEIIA 175

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +D    ++L+KG +PG  KNS++ ++ + K 
Sbjct: 176 IDQPNNIMLIKGSIPGP-KNSFVQIKQNIKG 205


>gi|212704583|ref|ZP_03312711.1| hypothetical protein DESPIG_02645 [Desulfovibrio piger ATCC 29098]
 gi|212671982|gb|EEB32465.1| hypothetical protein DESPIG_02645 [Desulfovibrio piger ATCC 29098]
          Length = 209

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 83/206 (40%), Positives = 119/206 (57%), Gaps = 2/206 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           + G++ RKLGMT ++  +G  +PVTV+    C V   +T++ +GY A+Q+   E K K+V
Sbjct: 4   KMGILGRKLGMTRIFAGDGAAVPVTVIQAGPCPVTQVKTVETDGYNALQIALTEDKEKHV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SK M+G F+       ++L E R++   ++ P G   +   F  G +V VT  +IGKG+ 
Sbjct: 64  SKAMKGHFAKAGTGLYRELREIRLENAPEMEP-GQELTVEMFATGDVVKVTAKSIGKGYQ 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G M+R NF G + THG    HR++GS G    PG VFK +KMAG  G   VT   L +V 
Sbjct: 123 GRMRRWNFAGSKDTHGCEKVHRNNGSIGNNTFPGHVFKGRKMAGHWGNETVTEMGLVIVD 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V     +ILVKG VPG  KN  +L+R
Sbjct: 183 VRPADNVILVKGSVPGP-KNGLVLIR 207


>gi|328949277|ref|YP_004366614.1| 50S ribosomal protein L3 [Treponema succinifaciens DSM 2489]
 gi|328449601|gb|AEB15317.1| 50S ribosomal protein L3 [Treponema succinifaciens DSM 2489]
          Length = 206

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 88/210 (41%), Positives = 124/210 (59%), Gaps = 5/210 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++A+K+GMT V++  G   PVTV+ ++   VV  +T +K GY AV +G  + K   ++
Sbjct: 2   KGLIAKKVGMTQVFDENGNLTPVTVIRVEPNTVVATKTQEKCGYEAVVLGLEDLKPHKIT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP    F   N++PK+ L EFR    +  + VG       F   + +DVT  + GKGF G
Sbjct: 62  KPYAKQFPE-NITPKRHLKEFR--DFEGEVKVGDQIGVELFEKVRFIDVTATSKGKGFQG 118

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKR  F G RATHG S  HR  G TGC   PG   KN KM GRMG +RVTV+NL+VV V
Sbjct: 119 VMKRWGFHGGRATHG-SKFHREAGGTGCCTTPGHCLKNVKMPGRMGFDRVTVQNLKVVKV 177

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +  +++V+G VPG  +N  ++V+ + K 
Sbjct: 178 DPELNVLMVRGAVPGV-RNCTLIVKAAVKK 206


>gi|257125036|ref|YP_003163150.1| ribosomal protein L3 [Leptotrichia buccalis C-1013-b]
 gi|257048975|gb|ACV38159.1| ribosomal protein L3 [Leptotrichia buccalis C-1013-b]
          Length = 208

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 84/209 (40%), Positives = 124/209 (59%), Gaps = 4/209 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT ++  + + IPVTV+      +   +T +K GY A+ +  G+ + KN +KP
Sbjct: 2   ILGKKIGMTQIF-EDEKLIPVTVIEAGTNFITQIKTEEKEGYNAITLAYGDKREKNTTKP 60

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
             G F    V+PK+ L EF+V    D   +G           + VD++G + GKG +G M
Sbjct: 61  ELGIFKKAGVTPKRFLKEFKVANPAD-FALGQEIKVDVLEGIEFVDISGTSKGKGTAGVM 119

Query: 125 KRHNFGGLRATHGVSISHRSHGST-GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           KRHNFGG RA+HGVS +HR  GS  G       V K KKMAGR+G  +VTV+NL+V+  D
Sbjct: 120 KRHNFGGNRASHGVSRNHRLGGSNAGGAASNSNVPKGKKMAGRLGAEKVTVQNLQVIKFD 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  L+LVKG VPG  KN +++++ S K 
Sbjct: 180 VENSLLLVKGAVPGP-KNGYLVIKKSVKK 207


>gi|42559578|sp|P60457|RL3_SPIKU RecName: Full=50S ribosomal protein L3
 gi|34849393|gb|AAP58892.1| ribosomal protein L3 [Spiroplasma kunkelii CR2-3x]
          Length = 258

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 81/210 (38%), Positives = 132/210 (62%), Gaps = 6/210 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT ++  +GR IPVTV+ +++  V+   T ++NGY A+Q+   + ++  VS
Sbjct: 2   KGILGRKIGMTQIFATDGRLIPVTVVEVEHNIVLRVLTKEQNGYQALQLAVEDKRISLVS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP +G F   N +PK+ + E R   + D    G +     FT G+ VDVTG + GKGF+G
Sbjct: 62  KPDQGQFKKANTTPKRFVKEIR---NMDGYNSGDIIKADIFTAGEFVDVTGTSKGKGFTG 118

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           ++KRHN+      HG S  HR  GS G    P R+ K+KKM G +G  +VT++NLE++++
Sbjct: 119 SIKRHNYSRGPMGHG-SGYHRGVGSMGAIA-PNRILKSKKMPGHIGTEKVTIQNLEIIAI 176

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D ++  +LVKG +PG KK  +++++++ K 
Sbjct: 177 DTEKNALLVKGSIPGPKK-QFVVIKEAIKG 205


>gi|238018623|ref|ZP_04599049.1| hypothetical protein VEIDISOL_00458 [Veillonella dispar ATCC 17748]
 gi|237865094|gb|EEP66384.1| hypothetical protein VEIDISOL_00458 [Veillonella dispar ATCC 17748]
          Length = 213

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 97/214 (45%), Positives = 131/214 (61%), Gaps = 5/214 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ +KLGMT V+  EG+ +PVTV+      VV  +T++ +GY AVQ+G G  K K+
Sbjct: 1   MSKAILGKKLGMTQVFTAEGQLVPVTVVETTPSVVVRVKTVETDGYEAVQIGYGSIKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP++G F    V+P K L E RV    D   VG   +   F  G+LVDV G   GKGF
Sbjct: 61  LTKPVKGQFDKAGVAPVKYLREVRVANAAD-YTVGQTLAADIFAEGELVDVVGTGKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KRHNF     THG S SHR  GS G       G+V+K KK+ G+MGG RVTV+ L 
Sbjct: 120 AGTIKRHNFSRGPETHG-SKSHREPGSIGPMISGGGGKVYKGKKLPGQMGGYRVTVQRLS 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V  VD +R L+LVKG +PGA K S ++VR++ K 
Sbjct: 179 VEKVDAERNLLLVKGGIPGA-KGSLVMVRNTVKP 211


>gi|161611308|ref|YP_007411.2| 50S ribosomal protein L3 [Candidatus Protochlamydia amoebophila
           UWE25]
          Length = 221

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 77/222 (34%), Positives = 114/222 (51%), Gaps = 10/222 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--- 57
           M   ++ +K GM  +++ +G  I  TV+  +   +   +T + +GY A+Q+G  +     
Sbjct: 1   MALTMMGKKRGMIQLFDEKGNAIVCTVIQAEPNVITQIKTKETDGYTALQLGFEKVTGKT 60

Query: 58  ----VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113
                    KP  G F    V  ++ L E R+   ++   +G   S   F   + VD T 
Sbjct: 61  QHTIEARTGKPRLGHFKKAGVESRRFLVESRLDSTEE-YTLGQEISVDTFNGIEFVDATA 119

Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
           ++ GKG+ G MKRHNF G  A+HG S  HR  GSTG R  PGR     K AG+MG  RVT
Sbjct: 120 ISKGKGYQGVMKRHNFAGGPASHG-SGHHRHAGSTGMRSTPGRGLPGGKKAGQMGNERVT 178

Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           V+NL +V VD +  +I+VKG VPG  +N  + +  + K A  
Sbjct: 179 VQNLRIVKVDSENHVIVVKGQVPGP-RNGLVYITQAKKLAKK 219


>gi|291411673|ref|XP_002722112.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like
           [Oryctolagus cuniculus]
          Length = 348

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 78/216 (36%), Positives = 114/216 (52%), Gaps = 5/216 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGY-MAVQVGAGEAKVK 59
           R G++A KLGM  ++  +G R  VT+L + +C V+ + + +  NG   A+ VG       
Sbjct: 96  RVGLIALKLGMMPLWTKDGHRHVVTLLQVQDCHVLKYTSKENHNGKMAALTVGGKTVSRF 155

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             S  +  F+  + + PK+K+  F V  D+ ++  G+    ++F  GQ VDVT  TIGKG
Sbjct: 156 RKSTSVLEFYQELGLPPKQKVKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTARTIGKG 214

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR  F G  ATHG + +HR  G+     D  RV+   KM G+MG    T   L+V
Sbjct: 215 FQGVMKRWGFKGQPATHGQTKTHRRPGAI-STGDVARVWPGTKMPGQMGNIDRTAYGLKV 273

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             ++ K  +I V G VPG  KN  + V+DS   A  
Sbjct: 274 WRINTKHNIIYVNGSVPG-HKNCLVKVKDSKLPAYK 308


>gi|317476356|ref|ZP_07935605.1| 50S ribosomal protein L3 [Bacteroides eggerthii 1_2_48FAA]
 gi|316907382|gb|EFV29087.1| 50S ribosomal protein L3 [Bacteroides eggerthii 1_2_48FAA]
          Length = 195

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 81/196 (41%), Positives = 118/196 (60%), Gaps = 4/196 (2%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V++ EG+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +KP+ G F  
Sbjct: 1   MTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYQAVQLGFQDKKEKHTTKPLMGHFKK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             V+PKK L EF+  + +  L +G   +   F     VDV G + GKGF G +KRH FGG
Sbjct: 61  AGVTPKKHLAEFK--EFETELNLGDTVTVELFEGADFVDVVGTSKGKGFQGVVKRHGFGG 118

Query: 132 -LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
             + THG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V  +  L+L
Sbjct: 119 VGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKVIAEHNLLL 178

Query: 191 VKGCVPGAKKNSWILV 206
           +KG VPG  K S +++
Sbjct: 179 IKGSVPGC-KGSIVII 193


>gi|32491292|ref|NP_871546.1| hypothetical protein WGLp543 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|42559632|sp|Q8D212|RL3_WIGBR RecName: Full=50S ribosomal protein L3
 gi|25166499|dbj|BAC24689.1| rplC [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 215

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 90/208 (43%), Positives = 133/208 (63%), Gaps = 2/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT  +N +G  IPVTV+ + + ++V  + ++K+GY ++QV  G  K    +K
Sbjct: 3   GLIGRKIGMTRTFNSDGSSIPVTVIKISDNKIVQIKKIEKDGYSSIQVTTGVKKFSRENK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
            + G F    V   + L+EF+V K+     VG V S + F     V++TG++ GKGFSG 
Sbjct: 63  SIIGHFKKNKVELGRGLWEFKVDKNSKFY-VGQVLSINTFININKVNITGISKGKGFSGT 121

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR NF G  A+HG S+SHR+ GS G  Q PG+VFK KKM+G +G N+ TVKNL VV +D
Sbjct: 122 MKRWNFHGQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMSGHLGYNKNTVKNLFVVKID 181

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +  L+L+KG VPG+ K S ++++   K
Sbjct: 182 LEHELLLIKGSVPGS-KGSDLIIKPVVK 208


>gi|297623274|ref|YP_003704708.1| 50S ribosomal protein L3 [Truepera radiovictrix DSM 17093]
 gi|297164454|gb|ADI14165.1| 50S ribosomal protein L3 [Truepera radiovictrix DSM 17093]
          Length = 206

 Score =  232 bits (592), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 89/211 (42%), Positives = 122/211 (57%), Gaps = 7/211 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  K+GMT V+  + R +PVTV+    C VV  +T + +GY AVQ+G    + K  +
Sbjct: 2   KGLLGTKVGMTQVWQGD-RLVPVTVVLAGPCPVVQRKTPETDGYSAVQLGWIAKRDKVAT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G      VS ++ L EFR     D  P G   +   F  GQ VDVTG + G+G +G
Sbjct: 61  KPELGHAKKAGVSAQRHLVEFR-----DYDPEGDTVTVEIFKPGQKVDVTGTSKGRGTAG 115

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKR NF GL A+HGV   HR+ GS G R+ PGRV+K K+MAGR G  RVT   LE++ V
Sbjct: 116 VMKRWNFAGLPASHGVKKKHRAPGSIGQRKFPGRVYKGKRMAGRYGNERVTTLGLELLEV 175

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
                L+L+KG +PGA     ++V+ S + A
Sbjct: 176 RPDDNLLLIKGSIPGAN-GGLVVVKASTRGA 205


>gi|297569422|ref|YP_003690766.1| 50S ribosomal protein L3 [Desulfurivibrio alkaliphilus AHT2]
 gi|296925337|gb|ADH86147.1| 50S ribosomal protein L3 [Desulfurivibrio alkaliphilus AHT2]
          Length = 210

 Score =  232 bits (592), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 85/206 (41%), Positives = 119/206 (57%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GMT +++  G  IPVTV+    C V+  +TL K GY A+QVG G  K + ++
Sbjct: 5   MGLLGKKMGMTRIFSETGTAIPVTVIEAGPCVVLQKKTLAKEGYNAIQVGFGAKKEQRLN 64

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKGFS 121
           KP +G   +        + EFRV  D D   +G   S    F VG+LVDV   + G+GF 
Sbjct: 65  KPEKGHAKAAGKGGFYHIKEFRV-ADPDAYELGQEISMTEIFNVGELVDVRARSKGRGFQ 123

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRH F G RATHG S+ HR  G+ GC   P RV K KKM G+MG   VT KN  +V 
Sbjct: 124 GVVKRHGFKGGRATHG-SMFHRRPGAIGCSAWPSRVIKGKKMPGQMGDQFVTKKNCTIVD 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           +  ++ +++VKG VPGA K   + + 
Sbjct: 183 IRPEQNVLVVKGGVPGA-KEGLVQIY 207


>gi|161506873|ref|YP_001576827.1| 50S ribosomal protein L3 [Lactobacillus helveticus DPC 4571]
 gi|260102355|ref|ZP_05752592.1| 50S ribosomal protein L3 [Lactobacillus helveticus DSM 20075]
 gi|172048367|sp|A8YXK5|RL3_LACH4 RecName: Full=50S ribosomal protein L3
 gi|160347862|gb|ABX26536.1| 50S ribosomal protein L3 [Lactobacillus helveticus DPC 4571]
 gi|260083799|gb|EEW67919.1| 50S ribosomal protein L3 [Lactobacillus helveticus DSM 20075]
 gi|323465824|gb|ADX69511.1| 50S ribosomal protein L3 [Lactobacillus helveticus H10]
 gi|328463364|gb|EGF35037.1| 50S ribosomal protein L3 [Lactobacillus helveticus MTCC 5463]
          Length = 212

 Score =  232 bits (592), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 77/217 (35%), Positives = 119/217 (54%), Gaps = 5/217 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  +PVTV+      V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGRKVGMTQIFTKDGVLVPVTVVEATPNVVMQVKTVESDGYEAVQLGYQDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G       SPK+ + E R  +  D   VGS  +   F  G +V+VTG + G G+
Sbjct: 61  SNKPEKGHADKAKTSPKRFIREIRGVELKD-YEVGSEVTVDTFKEGDVVNVTGTSRGHGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR        THG S  HR  GS G      RV K K++ G MG  +VT++NL + 
Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKRLPGHMGMKKVTIENLVIE 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
            V   + ++++KG VPGA KNS I+V+ + K+    K
Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIVVKTASKAVKADK 212


>gi|42561270|ref|NP_975721.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|81829359|sp|Q6MSM6|RL3_MYCMS RecName: Full=50S ribosomal protein L3
 gi|42492768|emb|CAE77363.1| 50S RIBOSOMAL PROTEIN L3 [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|301320560|gb|ADK69203.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. mycoides SC
           str. Gladysdale]
          Length = 223

 Score =  232 bits (592), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 128/211 (60%), Gaps = 8/211 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+ MT V+   G+ +PVTV+ +    V+  +T+D +GY+AVQ+G  + +V  V+
Sbjct: 2   KGILGRKVEMTQVFTSAGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121
           KP  G F   N +PK+ + E R   +     +G V +    F  G+ VDVTG++ GKGF+
Sbjct: 62  KPELGHFKKANSNPKRFVKEIR---NMQGYELGQVINVSDIFVSGEYVDVTGISKGKGFA 118

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHN+      HG S  HR  GS G      R+FK+KKM G MG  + T++NLE+++
Sbjct: 119 GGIKRHNYARGPMAHG-SGYHRGIGSMGAI--INRIFKSKKMPGHMGNAKRTIQNLEIIA 175

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +D    ++L+KG +PG+ KNS++ ++ + K 
Sbjct: 176 IDQPNNIMLIKGSIPGS-KNSFVQIKQNIKG 205


>gi|301300208|ref|ZP_07206420.1| 50S ribosomal protein L3 [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852149|gb|EFK79821.1| 50S ribosomal protein L3 [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 195

 Score =  232 bits (592), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 76/200 (38%), Positives = 113/200 (56%), Gaps = 5/200 (2%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V+   G  +PVTV+ +D+  V+  +T++ +GY A+Q+G  + +    +KP +G  + 
Sbjct: 1   MTQVFTENGELVPVTVVKVDSNVVLQVKTMENDGYEAIQLGFDDLREVLTNKPAKGHAAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
            N +PK+ + E R   +     VG       F  G  VDVTG + G GF G++KR+    
Sbjct: 61  ANTTPKRFVREIR-DVELGEYKVGDEVKADIFEAGDFVDVTGTSKGHGFQGSIKRNGQHR 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
               HG S  HR  GS G      RV K K + GRMGGNRVT++NLE+V  D + G++L+
Sbjct: 120 GPMAHG-SRYHRRPGSMGVI--INRVMKGKLLPGRMGGNRVTIQNLEIVKADTENGVLLI 176

Query: 192 KGCVPGAKKNSWILVRDSFK 211
           KG VPGA K S + ++ + K
Sbjct: 177 KGNVPGANK-SLVTIKSTVK 195


>gi|269991357|emb|CAX12541.1| 50S ribosomal protein L3 [Fucus vesiculosus]
          Length = 209

 Score =  232 bits (592), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 84/211 (39%), Positives = 124/211 (58%), Gaps = 3/211 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+   K+GMT +++ EG  +PVTV+ +  C +   +T   NGY AVQ+G  + +V  
Sbjct: 1   MSIGIFGNKIGMTQIFDKEGLALPVTVIRVGPCFITQLKTEQLNGYSAVQIGYLKRQVLK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++K   G  +   + P   L E++V  D     +G V +  YF +GQ V+V+G +IGKGF
Sbjct: 61  LNKAELGHLTKNGLLPLLYLREYKV-PDPTNYSLGQVINVDYFQIGQFVNVSGKSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRHNF     THG S +H++ GS G    PGRVF  K+MAG++G  +VT+  LE++
Sbjct: 120 SGNQKRHNFKRGPMTHG-SKNHKAPGSIGPGTTPGRVFPGKRMAGQLGAKKVTISKLEIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            +D K  L+++KG VPG   N  + V  S K
Sbjct: 179 GIDSKHSLLILKGSVPGKSGN-LLNVSPSDK 208


>gi|237718743|ref|ZP_04549224.1| 50S ribosomal protein L3 [Bacteroides sp. 2_2_4]
 gi|229451875|gb|EEO57666.1| 50S ribosomal protein L3 [Bacteroides sp. 2_2_4]
          Length = 195

 Score =  232 bits (592), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 80/196 (40%), Positives = 117/196 (59%), Gaps = 4/196 (2%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G  + K K+ +KP+ G F  
Sbjct: 1   MTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTKPLMGHFKR 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             V+PK+ L EF+  +    L +G   +   F     VDV G + GKGF G +KRH FGG
Sbjct: 61  AGVTPKRHLAEFK--EFGTELNLGDTITVEMFNDANFVDVVGTSKGKGFQGVVKRHGFGG 118

Query: 132 -LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
             +ATHG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V     L+L
Sbjct: 119 VGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKVIADHNLLL 178

Query: 191 VKGCVPGAKKNSWILV 206
           +KG +PG  K S +L+
Sbjct: 179 IKGSIPGC-KGSIVLI 193


>gi|291296991|ref|YP_003508389.1| 50S ribosomal protein L3 [Meiothermus ruber DSM 1279]
 gi|290471950|gb|ADD29369.1| ribosomal protein L3 [Meiothermus ruber DSM 1279]
          Length = 214

 Score =  232 bits (592), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 97/217 (44%), Positives = 129/217 (59%), Gaps = 7/217 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  K+GMT ++  + + +PVTV+    C VV  +T++K+GY AVQ+G    K + V+
Sbjct: 2   KGILGTKVGMTQIWKGD-KAVPVTVILAGPCPVVQRKTIEKDGYEAVQLGFQSQKPQRVN 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP +G F+   V P K L E R        P G   + S F VG++VDVTG + G GF+G
Sbjct: 61  KPAKGHFAKAGVEPVKYLRELRGFN-----PEGDTVTVSIFNVGEVVDVTGTSKGHGFTG 115

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MK+ NF G   +HG    HR  GS G R+ PGRVFK KKMAGR G  RVT++ LEVV V
Sbjct: 116 VMKKWNFAGGNDSHGAHKIHRHGGSIGNRKTPGRVFKGKKMAGRWGNERVTIQGLEVVDV 175

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            +   LILVKG VPGA   S ++VR + K      GK
Sbjct: 176 LENENLILVKGSVPGAN-GSLVVVRQTSKVPAVKAGK 211


>gi|225706142|gb|ACO08917.1| Mitochondrial 39S ribosomal protein L3 [Osmerus mordax]
          Length = 345

 Score =  232 bits (592), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 83/214 (38%), Positives = 119/214 (55%), Gaps = 4/214 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59
           R G+VA KLGM  V+   G R  VT+L + +C V+ H T ++ +G+ A + VG   A   
Sbjct: 93  RVGLVAVKLGMAPVWTKSGERHVVTMLQVQDCHVLKHLTKEEYDGHTAALVVGGRNASPF 152

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             ++     F    V PK+K+  F+V  D+ ++  G+    ++F  GQ VDVT  TIGKG
Sbjct: 153 YKTEENMEMFRIAGVPPKQKVTTFKVS-DNAIIKPGTPLHAAHFRPGQYVDVTAKTIGKG 211

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR+ F G  A+HG + +HR  G++G   DP +VFK KKM G MG    T   L+V
Sbjct: 212 FQGVMKRYGFKGQPASHGQTKTHRRPGASGPGGDPAKVFKGKKMPGIMGNIYDTATGLKV 271

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             ++ K  ++ V G VPG  KN  + VRD+    
Sbjct: 272 WRINTKHNVLYVHGSVPG-HKNCLVKVRDTVLPP 304


>gi|94734480|emb|CAK11309.1| mitochondrial ribosomal protein L3 [Danio rerio]
          Length = 345

 Score =  232 bits (592), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 84/220 (38%), Positives = 117/220 (53%), Gaps = 4/220 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYM-AVQVGAGEAKVK 59
           R G+VA KLGM  V++  G R  VT+L + +C VV H + +  NG+  A+ VG       
Sbjct: 96  RVGLVAIKLGMMPVWSKSGERHVVTMLQVKDCHVVKHLSKEDYNGHTSALVVGGKNVSPF 155

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +        F +  + PK+KL  F V  D+ ++  G+    ++F  GQ VDVT  TIGKG
Sbjct: 156 HRPVGYLEIFQNAGIPPKQKLTTFCVT-DNAIIKPGTPLYAAHFRPGQYVDVTAKTIGKG 214

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR  F G  A+HG + +HR  G+ G   DP +VFK  KM GRMG    T   L++
Sbjct: 215 FQGVMKRWGFKGQPASHGQTKTHRRPGALGPGGDPAKVFKGTKMPGRMGNVYNTNFGLKI 274

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
             V+ K  ++ V G VPG  +N  + VRD+       K K
Sbjct: 275 WRVNTKYNILYVNGSVPG-HRNCLVKVRDTVLPTRLEKNK 313


>gi|258651363|ref|YP_003200519.1| 50S ribosomal protein L3 [Nakamurella multipartita DSM 44233]
 gi|258554588|gb|ACV77530.1| ribosomal protein L3 [Nakamurella multipartita DSM 44233]
          Length = 220

 Score =  232 bits (592), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 92/211 (43%), Positives = 121/211 (57%), Gaps = 3/211 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++  KLGMT V++   R +PVTV+      V   RT + +GY AVQ   G    + V+
Sbjct: 6   KGILGHKLGMTQVFDEANRVVPVTVVAAGPVVVTAVRTPETDGYSAVQFAFGAVDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKGFS 121
           KP  G F    V+P++ L E R   D     VG   +    F  G +VDVTG + GKG +
Sbjct: 66  KPAAGQFVKAGVTPRRHLVELRTD-DVSGYSVGQELTAAEVFDAGAVVDVTGTSKGKGTA 124

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F GL A HGV   HRS GS G    PGRVFK  +MAGRMG  +VTV+NL V +
Sbjct: 125 GVMKRHGFAGLGAGHGVQRKHRSPGSIGGCSTPGRVFKGLRMAGRMGNAKVTVQNLTVHA 184

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VD  RGL+L+ G VPG  K   ++++ + K+
Sbjct: 185 VDADRGLVLINGAVPGP-KGGLVMIKSAVKN 214


>gi|322436546|ref|YP_004218758.1| 50S ribosomal protein L3 [Acidobacterium sp. MP5ACTX9]
 gi|321164273|gb|ADW69978.1| 50S ribosomal protein L3 [Acidobacterium sp. MP5ACTX9]
          Length = 242

 Score =  232 bits (592), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 74/220 (33%), Positives = 119/220 (54%), Gaps = 7/220 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVKNV 61
            G++ +K+GMT +++  G   PVTVL    C +   +T+ K+GY A Q+G  +  K   V
Sbjct: 4   VGILGKKIGMTQIFDERGDVHPVTVLKAGPCVITQLKTMAKDGYDAAQIGYVDFVKASKV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRV---QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           +K M G F+  NV P + + E  +     +D  +  G       F   + VDV G + G+
Sbjct: 64  TKAMNGHFAKANVPPVRMIKEVAIQKASAEDAEVKAGDRILVDIFENERFVDVIGTSKGR 123

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF+G ++RH FGG   +HG     +  GS G    P RVF  ++M G MG  ++TV+NL 
Sbjct: 124 GFAGVIRRHGFGGGPKSHGHMF--QVQGSIGASSFPSRVFPGQRMPGHMGDAQITVRNLR 181

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           + ++D +  LILV+G VPGA ++ ++L+  +       +G
Sbjct: 182 IRAIDVEDNLILVEGAVPGA-RDGYVLISKAKAPPRERRG 220


>gi|15605616|ref|NP_212989.1| ribosomal protein L03 [Aquifex aeolicus VF5]
 gi|3914748|sp|O66431|RL3_AQUAE RecName: Full=50S ribosomal protein L3
 gi|2982767|gb|AAC06393.1| ribosomal protein L03 [Aquifex aeolicus VF5]
          Length = 241

 Score =  232 bits (592), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 87/222 (39%), Positives = 126/222 (56%), Gaps = 4/222 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVK 59
           M  G++  K+GMT V   +G  IPVTV+      VV  ++ + K+GY A+Q+GA EAK K
Sbjct: 1   MPLGLIGEKVGMTRVLLKDGTAIPVTVIKFPVNYVVQVKSQNTKDGYNALQIGAYEAKEK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +++KP+ G F    V   ++L+EFRV   ++      +     F  G LVDV G++ G+G
Sbjct: 61  HLTKPLIGHFKKHGVPLLRRLWEFRVDNPEEFQSGQQLKVEDVFKPGDLVDVWGISKGRG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+GAMKR +F G   +HG    HR+ G+ G R DPGRV+K K+M G  G   V V+ L V
Sbjct: 121 FAGAMKRWDFAGFPKSHG-HRYHRAVGAIGQRTDPGRVWKGKRMPGHYGAKPVRVQGLFV 179

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF--KSAVNCKGK 219
           V V  +   ILVKG VPG  K   ++ + +   + +   K K
Sbjct: 180 VDVLPEENAILVKGSVPGHNKGIVVVEQSTIAYRKSQKLKQK 221


>gi|295425652|ref|ZP_06818339.1| 50S ribosomal protein L3 [Lactobacillus amylolyticus DSM 11664]
 gi|295064668|gb|EFG55589.1| 50S ribosomal protein L3 [Lactobacillus amylolyticus DSM 11664]
          Length = 212

 Score =  232 bits (592), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 78/217 (35%), Positives = 118/217 (54%), Gaps = 5/217 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  +PVTV+      V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGRKVGMTQIFTKDGALVPVTVVEATPNVVMQVKTVESDGYDAVQLGYQDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +    SPK+ + E R  +  +   VGS  +   F  G +VDVTG T G G+
Sbjct: 61  SNKPEKGHAAKAKTSPKRFIREIRGVELKN-YEVGSEVTVDTFKEGDVVDVTGTTRGHGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR        THG S  HR  GS G      RV K K + G MG  +VT++NL + 
Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKHLPGHMGVKKVTIENLVIE 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
            V   + ++++KG VPGA KNS I+V+ + K     K
Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIVVKTASKVTDAAK 212


>gi|288803933|ref|ZP_06409356.1| 50S ribosomal protein L3 [Prevotella melaninogenica D18]
 gi|302345074|ref|YP_003813427.1| 50S ribosomal protein L3 [Prevotella melaninogenica ATCC 25845]
 gi|288333566|gb|EFC72018.1| 50S ribosomal protein L3 [Prevotella melaninogenica D18]
 gi|302150099|gb|ADK96361.1| 50S ribosomal protein L3 [Prevotella melaninogenica ATCC 25845]
          Length = 204

 Score =  231 bits (591), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 85/205 (41%), Positives = 125/205 (60%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G GEAK K  SK
Sbjct: 3   GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G F     +PKK L EF+  ++     +G   +   F+  + VDV G + GKGF G 
Sbjct: 63  PQQGHFKKAGTTPKKHLAEFKFDEE---YNLGDTVTVELFSNAKFVDVVGTSKGKGFQGV 119

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  ++THG     R  GS G    P +VFK  +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  LILVKG V G   ++ I+ +
Sbjct: 180 IPEHNLILVKGSVAGCNGSTVIIKK 204


>gi|50364938|ref|YP_053363.1| 50S ribosomal protein L3 [Mesoplasma florum L1]
 gi|81827327|sp|Q6F1Z4|RL3_MESFL RecName: Full=50S ribosomal protein L3
 gi|50363494|gb|AAT75479.1| 50S ribosomal protein L3 [Mesoplasma florum L1]
          Length = 238

 Score =  231 bits (591), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 86/217 (39%), Positives = 128/217 (58%), Gaps = 10/217 (4%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+ MT V+   G+ +PVTV+ +    ++  +TL+ NGY+A Q+G  + +   V+
Sbjct: 2   KGILGRKVEMTQVFTANGKLVPVTVVEVQPNTILQVKTLETNGYVATQLGVFDKRENLVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121
           KP  G F   N  PK+ + E R   + +   VGSV S    F  GQ VDVTG++ GKGF+
Sbjct: 62  KPELGQFKKANSVPKRFVKEIR---NMEGFEVGSVISASDIFETGQYVDVTGISKGKGFA 118

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           GA+KRHN+      HG S  HR  GS G      R+FK+KKMAG MG  + TV+NLEV++
Sbjct: 119 GAIKRHNYSRGPMAHG-SGYHRGIGSMGAI--INRIFKSKKMAGHMGHVKRTVQNLEVIA 175

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           +D    ++LVKG +PG  K  ++ ++ + K   N + 
Sbjct: 176 ID--NNIMLVKGSIPGPNKG-FVTIKANVKGLSNTQA 209


>gi|33519658|ref|NP_878490.1| 50S ribosomal subunit protein L3 [Candidatus Blochmannia
           floridanus]
 gi|42559603|sp|Q7VQE8|RL3_BLOFL RecName: Full=50S ribosomal protein L3
 gi|33517321|emb|CAD83706.1| 50S ribosomal subunit protein L3 [Candidatus Blochmannia
           floridanus]
          Length = 219

 Score =  231 bits (591), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 89/208 (42%), Positives = 130/208 (62%), Gaps = 1/208 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+V RKLGMT + N EG  I VT++ +    V   +  +K+GY AVQV  G  + K ++K
Sbjct: 3   GLVGRKLGMTRIINEEGIMIAVTMIEILPHYVTQVKNKEKDGYCAVQVTTGNTRDKCLNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G    + ++  K L+EFR+   + L+ VG +F+         VDVTG++ GKGF+GA
Sbjct: 63  PKLGHLKKLGINYGKGLWEFRLNDSNRLISVGDIFTLKVLKCINKVDVTGISKGKGFAGA 122

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR NF    A+HG S+SHR+ GS G  Q PG+VFK KKMAG +G  + T++NL V+++D
Sbjct: 123 VKRWNFRTQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGHLGYEKATIQNLAVINID 182

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
            K  L+LVKG +PG    + ++V+ S K
Sbjct: 183 IKNNLLLVKGAIPGVIGEN-VIVKRSVK 209


>gi|149198922|ref|ZP_01875963.1| 50S ribosomal protein L3 [Lentisphaera araneosa HTCC2155]
 gi|149137917|gb|EDM26329.1| 50S ribosomal protein L3 [Lentisphaera araneosa HTCC2155]
          Length = 210

 Score =  231 bits (591), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 86/201 (42%), Positives = 119/201 (59%), Gaps = 4/201 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           +G++ +KLGMT VY+ +GR +PVTV+    C V+  +T DK+ Y A+Q+G G  + KNVS
Sbjct: 2   TGIIGKKLGMTQVYDDKGRLVPVTVIEAGPCPVLDVKTNDKDSYSALQIGFGSKRAKNVS 61

Query: 63  KPMRGFFSSVNV--SPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           K + G  +  N   +P   + E R++ D D   VGSV +   F+    VDV G T G+GF
Sbjct: 62  KAVLGHLAKSNNQENPPALIKEIRLEADSDK-EVGSVLTVEEFSDIAYVDVIGTTKGRGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR NFGG RA+HG     R  GS G    PGRVFK KKM G MG  + T + L+V+
Sbjct: 121 QGVVKRWNFGGGRASHGG-DWERKGGSIGMCNWPGRVFKGKKMPGHMGSVQRTSQGLKVI 179

Query: 181 SVDDKRGLILVKGCVPGAKKN 201
            V  +  +++VKG VPG    
Sbjct: 180 QVRPEENILMVKGAVPGFNGG 200


>gi|227879243|ref|ZP_03997113.1| 50S ribosomal protein L3 [Lactobacillus crispatus JV-V01]
 gi|227894520|ref|ZP_04012325.1| 50S ribosomal protein L3 [Lactobacillus ultunensis DSM 16047]
 gi|256844429|ref|ZP_05549915.1| 50S ribosomal protein L3 [Lactobacillus crispatus 125-2-CHN]
 gi|256849183|ref|ZP_05554616.1| 50S ribosomal protein L3 [Lactobacillus crispatus MV-1A-US]
 gi|262047199|ref|ZP_06020157.1| 50S ribosomal protein L3 [Lactobacillus crispatus MV-3A-US]
 gi|293380377|ref|ZP_06626448.1| 50S ribosomal protein L3 [Lactobacillus crispatus 214-1]
 gi|295692160|ref|YP_003600770.1| 50S ribosomal protein l3 [Lactobacillus crispatus ST1]
 gi|315037530|ref|YP_004031098.1| 50S ribosomal protein L3 [Lactobacillus amylovorus GRL 1112]
 gi|325956003|ref|YP_004286613.1| 50S ribosomal protein L3 [Lactobacillus acidophilus 30SC]
 gi|227861137|gb|EEJ68786.1| 50S ribosomal protein L3 [Lactobacillus crispatus JV-V01]
 gi|227863679|gb|EEJ71100.1| 50S ribosomal protein L3 [Lactobacillus ultunensis DSM 16047]
 gi|256613507|gb|EEU18710.1| 50S ribosomal protein L3 [Lactobacillus crispatus 125-2-CHN]
 gi|256713959|gb|EEU28947.1| 50S ribosomal protein L3 [Lactobacillus crispatus MV-1A-US]
 gi|260572444|gb|EEX29006.1| 50S ribosomal protein L3 [Lactobacillus crispatus MV-3A-US]
 gi|290923060|gb|EFD99991.1| 50S ribosomal protein L3 [Lactobacillus crispatus 214-1]
 gi|295030266|emb|CBL49745.1| 50S ribosomal protein L3 [Lactobacillus crispatus ST1]
 gi|312275663|gb|ADQ58303.1| 50S ribosomal protein L3 [Lactobacillus amylovorus GRL 1112]
 gi|325332568|gb|ADZ06476.1| 50S ribosomal protein L3 [Lactobacillus acidophilus 30SC]
 gi|327182826|gb|AEA31273.1| 50S ribosomal protein L3 [Lactobacillus amylovorus GRL 1118]
          Length = 212

 Score =  231 bits (591), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 77/217 (35%), Positives = 119/217 (54%), Gaps = 5/217 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  +PVTV+      V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGRKVGMTQIFTKDGVLVPVTVVEATPNVVMQVKTVESDGYEAVQLGYQDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G       SPK+ + E R  +  D   VGS  +   F  G +V+VTG + G G+
Sbjct: 61  SNKPEKGHADKAKTSPKRFIREIRGVELKD-YEVGSEVTVDTFKEGDVVNVTGTSRGHGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR        THG S  HR  GS G      RV K K++ G MG  +VT++NL + 
Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKRLPGHMGVKKVTIENLVIE 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
            V   + ++++KG VPGA KNS I+V+ + K+    K
Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIVVKTASKAVKADK 212


>gi|145356307|ref|XP_001422374.1| Putative mitochondrial ribosomal protein L3 [Ostreococcus
           lucimarinus CCE9901]
 gi|144582616|gb|ABP00691.1| Putative mitochondrial ribosomal protein L3 [Ostreococcus
           lucimarinus CCE9901]
          Length = 211

 Score =  231 bits (591), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 103/212 (48%), Positives = 132/212 (62%), Gaps = 3/212 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVKN 60
           R+G VA K GMTC ++  G RIP+TVL +D+C+VV  +T    +GY AVQVG G  K K 
Sbjct: 2   RTGAVAIKTGMTCDWDARGTRIPLTVLWIDDCEVVAAKTSSGADGYDAVQVGYGSRKPKQ 61

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K   G+F     + K+ L EFR   D  L P G+  + ++F  GQ VDV G+T GKGF
Sbjct: 62  VTKAELGYFVRRKTNIKRALCEFRTSADGVLAP-GTAITAAHFAAGQYVDVQGVTKGKGF 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G MKR  F G  A+HG +  HR+HGS G  QDPGRVFK KKMAGRMGG   TV++  V 
Sbjct: 121 QGPMKRWGFSGQPASHGNTKKHRAHGSIGQCQDPGRVFKGKKMAGRMGGRTRTVQSAYVY 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD ++ L+ VKG VPG      + +RDS + 
Sbjct: 181 KVDTEKNLVYVKGQVPG-NAGMAVKIRDSLRK 211


>gi|295107591|emb|CBL05134.1| LSU ribosomal protein L3P [Gordonibacter pamelaeae 7-10-1-b]
          Length = 206

 Score =  231 bits (591), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 90/209 (43%), Positives = 122/209 (58%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M + +  +K+GMT ++  + R +PVTV+  +  +V   +T   +GY AVQ+G G  K K 
Sbjct: 1   MINAIYGKKIGMTQIFGEDDRVVPVTVIQAEPNKVCQVKTKATDGYEAVQMGFGAIKEKK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM+G F     +P + L E RV+       VG   + + F   + VDVTG + GKGF
Sbjct: 61  VNKPMKGHFEKQGAAPVRYLREVRVEN-AGEYNVGDEQTVAAFAETKKVDVTGTSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR+ F G    HG    HR+ GS G    P RVFK  K+ G MG + VTVKNLEVV
Sbjct: 120 AGVMKRYGFRGGPGGHGAH-FHRAPGSVGQCATPSRVFKGLKLPGHMGCDTVTVKNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            VD+ + LILVKG VPG  KN  + VR +
Sbjct: 179 RVDEDQNLILVKGAVPGG-KNGIVRVRMA 206


>gi|308190095|ref|YP_003923026.1| 50S ribosomal protein L3 [Mycoplasma fermentans JER]
 gi|319777391|ref|YP_004137042.1| 50S ribosomal protein l3 [Mycoplasma fermentans M64]
 gi|307624837|gb|ADN69142.1| 50S ribosomal protein L3 [Mycoplasma fermentans JER]
 gi|318038466|gb|ADV34665.1| 50S ribosomal protein L3 [Mycoplasma fermentans M64]
          Length = 275

 Score =  231 bits (591), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 80/215 (37%), Positives = 120/215 (55%), Gaps = 6/215 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT ++   G  +PVTV+ +    V    + DKNGY+A Q+  GE K    +
Sbjct: 2   KGILGRKIGMTQIFTELGASVPVTVIEVQPNVVTKVLSADKNGYVATQIAVGEKKEHRSN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP++G F+    +PK+ + E R  +      +G     + F  G+LVD+TG + GKGF+G
Sbjct: 62  KPLKGQFAQAKTTPKRYVKEIRGMQG---YELGQTIKANIFKAGELVDITGTSKGKGFAG 118

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180
            +KR N      +HG     +    TG   D    RVFK   M G +G  R TV+NLE+V
Sbjct: 119 TIKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVFKGMTMPGHLGAVRTTVQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            VD    ++LVKG +PGA KNS++++R++ K   N
Sbjct: 179 KVDVANNIMLVKGSIPGA-KNSYVMIREAVKGLPN 212


>gi|242219427|ref|XP_002475493.1| mitochondrial 50S ribosomal protein L3 [Postia placenta Mad-698-R]
 gi|220725308|gb|EED79301.1| mitochondrial 50S ribosomal protein L3 [Postia placenta Mad-698-R]
          Length = 269

 Score =  231 bits (590), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 105/218 (48%), Positives = 142/218 (65%), Gaps = 5/218 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVV-HRTLDKN--GYMAVQVGAGEAK 57
           +R+G++ARK GMT +++  G R PVTVL L+NCQV    +T+ K+   Y AVQV A +  
Sbjct: 1   VRTGLIARKRGMTVMWDDHGARFPVTVLQLENCQVTANIKTVRKDLSEYHAVQVAATDRP 60

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
            K  +K M G F    V PK+ + EF V  D   +P+G+  S  +F  GQ VDV   ++G
Sbjct: 61  AKTATKQMLGHFKKAGVDPKRIVKEFPVTPD-AHVPIGTTLSAVHFVPGQYVDVIANSLG 119

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF G MK+ NF GLRA+HGVS+SHRS G+ G  QDPGRV+  KKMAGR+GG R T +NL
Sbjct: 120 KGFQGTMKKWNFKGLRASHGVSVSHRSAGAIGAHQDPGRVWPGKKMAGRLGGVRTTTQNL 179

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            V+ VD    LI V+GCVPG   ++ ++VRD+ K  ++
Sbjct: 180 AVIRVDSALDLIFVRGCVPGID-DAHVMVRDAKKKMIS 216


>gi|212697253|ref|ZP_03305381.1| hypothetical protein ANHYDRO_01821 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325848888|ref|ZP_08170398.1| 50S ribosomal protein L3 [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|212675702|gb|EEB35309.1| hypothetical protein ANHYDRO_01821 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325480532|gb|EGC83594.1| 50S ribosomal protein L3 [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 209

 Score =  231 bits (590), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 90/208 (43%), Positives = 124/208 (59%), Gaps = 3/208 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           +   K+GMT V + +G   PVTVL  D   +V  ++ + +GY ++QVG  + K KNV KP
Sbjct: 4   IFTTKVGMTQVIDEDGVVTPVTVLKADENVIVQVKSEEVDGYNSIQVGYYDKKEKNVKKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           +RG F   N S K+ L E R+ +  +L P G   S   F  G+LVD+   + GKG  GA+
Sbjct: 64  IRGHFDKANASYKRYLKEVRLSEKSELNP-GDTLSVDQFEEGELVDIVATSKGKGTQGAI 122

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR N+G   A+HG S SHR  G+     DP RVFK +K +G+MG  RVTV+NL+VV V+ 
Sbjct: 123 KRWNYGRGPASHG-SKSHRVAGARAAGSDPARVFKGRKGSGKMGNERVTVQNLKVVKVNT 181

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +   ILVKG VPG  K   + V+ + KS
Sbjct: 182 EDSYILVKGAVPGP-KGGLVQVKQAIKS 208


>gi|114589225|ref|XP_516751.2| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
          Length = 348

 Score =  231 bits (590), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 79/221 (35%), Positives = 117/221 (52%), Gaps = 5/221 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKV 58
            R G++A KLGM  ++  +G++  VT+L + +C V+ + + +  NG MA + VG      
Sbjct: 95  FRVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSR 154

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
              +  +  F+  + + PK+ +  F +  +  + P G+    ++F  GQ VDVT  TIGK
Sbjct: 155 FRKATSILEFYRELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGK 213

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G MKR  F G  ATHG + +HR  G+     D GRV+   KM G+MG    T   L+
Sbjct: 214 GFQGVMKRWGFKGQPATHGQTKTHRRPGAV-ATGDIGRVWPGTKMPGKMGNIYRTEYGLK 272

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           V  ++ K  +I V G VPG  KN  + VRDS   A    GK
Sbjct: 273 VWRINTKHNIIYVNGSVPG-HKNCLVKVRDSKLPAYKDLGK 312


>gi|71083804|ref|YP_266524.1| 50S ribosomal protein L3 [Candidatus Pelagibacter ubique HTCC1062]
 gi|109893535|sp|Q4FLL8|RL3_PELUB RecName: Full=50S ribosomal protein L3
 gi|71062917|gb|AAZ21920.1| 50S ribosomal protein L3 [Candidatus Pelagibacter ubique HTCC1062]
          Length = 236

 Score =  231 bits (590), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 106/209 (50%), Positives = 142/209 (67%), Gaps = 2/209 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
             ++ +K+GMT  +   GR +PVTV+ ++  +V+     +K GY AVQ+G G+ K   ++
Sbjct: 4   IALIGKKIGMTREFYKTGRLVPVTVIKMEKARVIQVIEEEKRGYKAVQLGFGKIKASKLT 63

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K M+G ++  N   KKKL EFRV KD +L   G+ F    F   + VD T  TIGKGF+G
Sbjct: 64  KAMKGLYAKKNTEAKKKLKEFRV-KDTELYKEGNEFGLEIFNEVKFVDTTSKTIGKGFAG 122

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNFGGLRATHGVS+SHRSHGSTG RQDPG+VFK KKMAG MG    T++NLE++  
Sbjct: 123 AMKRHNFGGLRATHGVSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDRVRTMQNLEIIKT 182

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D +  L+ +KG +PG+ KN+ ILV+ S K
Sbjct: 183 DIENELLYLKGSIPGS-KNTEILVKKSVK 210


>gi|44209|emb|CAA29704.1| unnamed protein product [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 223

 Score =  231 bits (590), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 80/217 (36%), Positives = 129/217 (59%), Gaps = 8/217 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+ MT V+   G+ +PVTV+ +    V+  +T+D +GY+AVQ+G  + +V  V+
Sbjct: 2   KGILGRKVEMTQVFTNSGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121
           KP  G F   N +PK+ + E R   +     +G V +    F  G+ VDVTG++ GKGF+
Sbjct: 62  KPELGHFKKANSNPKRFVKEIR---NMQGYEIGQVINVSDIFVSGEYVDVTGISKGKGFA 118

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHN+      HG S  HR  GS G      R+FK+KKM G MG  + T++NLE+++
Sbjct: 119 GGIKRHNYSRGPMAHG-SGYHRGIGSMGAI--INRIFKSKKMPGHMGNAKRTIQNLEIIA 175

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           +D    ++L+KG +PG  KNS++ ++ + K   + + 
Sbjct: 176 IDQSNNIMLIKGPIPGP-KNSFVQIKQNVKGMSSKQA 211


>gi|58336630|ref|YP_193215.1| 50S ribosomal protein L3 [Lactobacillus acidophilus NCFM]
 gi|227903187|ref|ZP_04020992.1| 50S ribosomal protein L3 [Lactobacillus acidophilus ATCC 4796]
 gi|81311536|sp|Q5FM90|RL3_LACAC RecName: Full=50S ribosomal protein L3
 gi|58253947|gb|AAV42184.1| 50S ribosomal protein L3 [Lactobacillus acidophilus NCFM]
 gi|227868992|gb|EEJ76413.1| 50S ribosomal protein L3 [Lactobacillus acidophilus ATCC 4796]
          Length = 212

 Score =  231 bits (590), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 77/217 (35%), Positives = 119/217 (54%), Gaps = 5/217 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT ++  +G  +PVTV+      V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGRKVGMTQIFTKDGILVPVTVVEATPNVVMQVKTVESDGYEAVQLGYQDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G       SPK+ + E R  +  D   VGS  +   F  G +V+VTG + G G+
Sbjct: 61  SNKPEKGHADKAKTSPKRFIREIRGVELKD-YEVGSEVTVDTFKEGDVVNVTGTSRGHGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR        THG S  HR  GS G      RV K K++ G MG  +VT++NL + 
Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKRLPGHMGVKKVTIENLVIE 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
            V   + ++++KG VPGA KNS I+V+ + K+    K
Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIVVKTASKAVKADK 212


>gi|171689544|ref|XP_001909712.1| hypothetical protein [Podospora anserina S mat+]
 gi|170944734|emb|CAP70845.1| unnamed protein product [Podospora anserina S mat+]
          Length = 382

 Score =  231 bits (590), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 98/218 (44%), Positives = 137/218 (62%), Gaps = 2/218 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+GV+A K GMT    + G RIP TVL LD  Q V+++T   +GY AVQVG GE   KN
Sbjct: 83  VRAGVLAIKKGMTAFMGLTGTRIPCTVLQLDRVQTVLNKTRKDHGYWAVQVGFGERDPKN 142

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +  PM G++ +  ++PK++L EF+V+ +  LLPVG    P +F +GQ VDV   + G GF
Sbjct: 143 IGAPMLGYYEAKGIAPKEQLAEFKVRDEKGLLPVGVQLMPDWFYIGQRVDVRSNSRGMGF 202

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179
           +G MKRH F G  A+HG S +HR+ GS G  Q  G RV   KKM GRMG  RVTV+NL +
Sbjct: 203 AGGMKRHGFSGQEASHGNSKNHRTIGSAGPSQGSGSRVLPGKKMPGRMGNQRVTVQNLPI 262

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           + +D+  G+++VKG V G  K   + ++D+ K     +
Sbjct: 263 LLIDNDLGIVVVKGAVAGP-KGCVVKIQDACKKPPPPE 299


>gi|301774558|ref|XP_002922699.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like [Ailuropoda
           melanoleuca]
          Length = 348

 Score =  231 bits (589), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 78/216 (36%), Positives = 116/216 (53%), Gaps = 5/216 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGY-MAVQVGAGEAKVK 59
           R G++A KLGM  ++  +GR+  VT+L + +C V+ +   +  NG   A+ VG   A   
Sbjct: 96  RVGLIALKLGMMPLWTKDGRKHVVTLLQVQDCHVLKYTPKENHNGKMAALTVGGKTASRF 155

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           + S  +  F+  + + PK+K+  F V  D+ ++  G+    ++F  GQ VDVT  TIGKG
Sbjct: 156 HKSTSVLEFYQELGLPPKQKVKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 214

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR  F G  ATHG + +HR  G+     D  R++   KM G+MG    T   L+V
Sbjct: 215 FQGVMKRWGFKGQPATHGQTKTHRRPGAI-STGDVARIWPGTKMPGQMGNRDRTAYGLKV 273

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             ++ K  +I V G VPG  KN  + +RDS   A  
Sbjct: 274 WRINTKHNVIYVNGSVPG-HKNCLVKIRDSNLPAYK 308


>gi|190346390|gb|EDK38465.2| hypothetical protein PGUG_02563 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 279

 Score =  231 bits (589), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 101/210 (48%), Positives = 137/210 (65%), Gaps = 2/210 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  K GM   Y  +G +   TVL +D+C+V+ ++T + +GY AV VG+G  K+KN+
Sbjct: 57  RPGLLGIKRGMITWYTEDGNQFAATVLEVDSCEVMANKTKETDGYTAVMVGSG-TKLKNL 115

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +           VSPK+ + EFRV+ +  L+PVG+     YF VGQLVDV+G++ GKGF+
Sbjct: 116 TPDQLRLAQQAGVSPKRSIREFRVRDESGLIPVGTELRADYFAVGQLVDVSGVSKGKGFA 175

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRH F GL+A+HGVS +HRS GSTG  QDPGRV   KKMAG MG    TV N EV+ 
Sbjct: 176 GVIKRHGFAGLQASHGVSKAHRSAGSTGATQDPGRVLPGKKMAGHMGAVNRTVFNNEVLH 235

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            D   G+++VKG VPG  K S I +RD+ K
Sbjct: 236 ADGDAGILVVKGVVPGPNK-SVIKIRDAKK 264


>gi|237733228|ref|ZP_04563709.1| 50S ribosomal protein L3 [Mollicutes bacterium D7]
 gi|229383609|gb|EEO33700.1| 50S ribosomal protein L3 [Coprobacillus sp. D7]
          Length = 232

 Score =  231 bits (589), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 79/202 (39%), Positives = 113/202 (55%), Gaps = 4/202 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V+  +G  IPVTV+  D   V+  +T+  +GY A+QVG  + + K  +K   G    
Sbjct: 1   MTQVFTTDGLLIPVTVVEADANVVLQKKTVATDGYDAIQVGFEDKREKLANKAELGIVKK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
            N +PK+ + EFR  +      VG   +   F  G++VDVTG + GKG+ G +KRH    
Sbjct: 61  ANTAPKRFIKEFRYDEMMS-YEVGDKITVDSFVAGEVVDVTGTSKGKGYQGVIKRHGQRI 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
               HG S +HR  GS G    P R+   KK+ G+MG    TV+NLEVV+VD +  L+L+
Sbjct: 120 GPKGHG-SGAHRIVGSMGPIA-PNRIAPGKKLPGQMGHVTRTVQNLEVVAVDVENNLLLI 177

Query: 192 KGCVPGAKKNSWILVRDSFKSA 213
           KG VPG KK   ++V+   K+A
Sbjct: 178 KGSVPGPKKG-LVIVKSGIKAA 198


>gi|229917358|ref|YP_002886004.1| 50S ribosomal protein L3 [Exiguobacterium sp. AT1b]
 gi|259646546|sp|C4KZP6|RL3_EXISA RecName: Full=50S ribosomal protein L3
 gi|229468787|gb|ACQ70559.1| ribosomal protein L3 [Exiguobacterium sp. AT1b]
          Length = 208

 Score =  231 bits (589), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 90/212 (42%), Positives = 128/212 (60%), Gaps = 5/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT ++N  G  +PVTV+ ++   V+  +T+D +GY AVQ+G G+ K   
Sbjct: 1   MAKGILGTKLGMTQIFNEAGEVVPVTVVAVEGNVVLQLKTVDTDGYEAVQLGFGDIKESR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + E R     +   +G       F  G+LVDVTG + GKGF
Sbjct: 61  QNKPSKGHAAKANATPKRFIKEVRTS--VEGYEIGQEIKADIFAAGELVDVTGTSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KRH        HG S  HR  GS G    P RVFK K + G+MGG R T++NLEVV
Sbjct: 119 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGQMGGERKTIQNLEVV 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +RGL+LVKG +PGA+K S ++++ + K 
Sbjct: 177 KVDVERGLLLVKGAIPGARK-SNVIIKSAVKG 207


>gi|317503980|ref|ZP_07961988.1| 50S ribosomal protein L3 [Prevotella salivae DSM 15606]
 gi|315665006|gb|EFV04665.1| 50S ribosomal protein L3 [Prevotella salivae DSM 15606]
          Length = 204

 Score =  231 bits (589), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 82/205 (40%), Positives = 122/205 (59%), Gaps = 5/205 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ +P TV+    C V   +T +K+GY A+Q+G  EAK    SK
Sbjct: 3   GLIGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTEEKDGYKALQLGFEEAKENRTSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           PM G F     +PKK L EF+  ++     +G   +   F+  + VD+ G + GKGF G 
Sbjct: 63  PMMGTFKKAGTTPKKHLAEFKFNEE---YNLGDTLTVEIFSDAKFVDIVGTSKGKGFQGV 119

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  ++THG     R  GS G    P +VFK  +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  L+LVKG V G    S +L++
Sbjct: 180 IPEHNLLLVKGSVAGCN-GSTVLIK 203


>gi|297170808|gb|ADI21828.1| ribosomal protein L3 [uncultured gamma proteobacterium
           HF0130_25M15]
          Length = 305

 Score =  231 bits (589), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 132/212 (62%), Gaps = 4/212 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +K GMT V+  +GR +PVT++  +   +   +T   +GY A+QV  G+   KN  
Sbjct: 2   IGIVGKKCGMTRVFTDDGRSVPVTIVQANPNLINRIKTEATDGYDAIQVLTGQT-TKNPK 60

Query: 63  KPMRGFFSSV-NVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           KP  G   +  N     KL EFR+  ++ + +  G   +  YF  G+LVDV+G +IGKG+
Sbjct: 61  KPDSGQIKTNPNEKLSHKLHEFRLNANELEQVDTGKEITVDYFEKGELVDVSGNSIGKGY 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNF    ATHG S++HR+ GS G  Q PGRVFK KKMAGRMG  + T++NLEV+
Sbjct: 121 AGVIKRHNFKTQDATHGNSLAHRAPGSIGQNQTPGRVFKGKKMAGRMGNVKKTMQNLEVI 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +D  R LI +KG + G  +NS++++  S KS
Sbjct: 181 DIDSDRNLIFIKGSIAG-HENSFVVITPSIKS 211


>gi|160947700|ref|ZP_02094867.1| hypothetical protein PEPMIC_01635 [Parvimonas micra ATCC 33270]
 gi|158446834|gb|EDP23829.1| hypothetical protein PEPMIC_01635 [Parvimonas micra ATCC 33270]
          Length = 208

 Score =  231 bits (589), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 78/208 (37%), Positives = 118/208 (56%), Gaps = 3/208 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT ++  +G  + VTV+      V   +T++ +GY A+Q G  + K K V+KP
Sbjct: 4   ILGKKIGMTQIFTEDGTVVSVTVVEAGPMFVTQVKTVETDGYNAIQCGYVDKKEKKVTKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           ++G F  V+V  K+ + EFR+  + +    G       F  G  VDV G + GKG  GA+
Sbjct: 64  LKGHFDKVSVGYKRFVREFRL-NEGETFETGQEIKVDLFAEGDKVDVIGTSKGKGTQGAI 122

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR N+G     HG S SHR  G+      PGRV K +K +G+ G  + TV+NL VV VD 
Sbjct: 123 KRWNYGRGPEGHG-SKSHRVAGARSAGTYPGRVLKGRKASGKTGNKKSTVQNLVVVKVDV 181

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
           ++ LILVKG +PG  K   + +R++ K 
Sbjct: 182 EKNLILVKGAIPGP-KGGLVTIREAVKR 208


>gi|91763160|ref|ZP_01265124.1| 50S ribosomal protein L3 [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717573|gb|EAS84224.1| 50S ribosomal protein L3 [Candidatus Pelagibacter ubique HTCC1002]
          Length = 236

 Score =  231 bits (589), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 108/209 (51%), Positives = 143/209 (68%), Gaps = 2/209 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
             +V +K+GMT  +   GR +PVTV+ ++  +V+     +K GY AVQ+G G+ K   ++
Sbjct: 4   IALVGKKIGMTREFYKTGRLVPVTVIKMEKARVIQVIEEEKRGYKAVQLGFGKIKASKLT 63

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K M+GF++  N   KKKL EFRV KD +L   G+ F    F   + VD T  TIGKGF+G
Sbjct: 64  KAMKGFYAKKNTEAKKKLKEFRV-KDTELYKEGNEFGLEIFNEVKFVDTTSKTIGKGFAG 122

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNFGGLRATHGVS+SHRSHGSTG RQDPG+VFK KKMAG MG    T++NLE++  
Sbjct: 123 AMKRHNFGGLRATHGVSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDRVRTMQNLEIIKT 182

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D +  L+ +KG +PG+ KN+ ILV+ S K
Sbjct: 183 DIENELLYLKGSIPGS-KNTEILVKKSVK 210


>gi|225849548|ref|YP_002729713.1| 50S ribosomal protein L3 [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644163|gb|ACN99213.1| 50S ribosomal protein L3 [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 228

 Score =  231 bits (589), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 88/211 (41%), Positives = 127/211 (60%), Gaps = 5/211 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++ + G+ +PVTV+    C V   R+ DK+GY AV +  GE K KN
Sbjct: 1   MPKGIIGKKIGMTRIF-VNGKAVPVTVVQAGPCYVTYLRSKDKDGYEAVALAFGERKEKN 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119
             KP+   F   N+ P K + EF + K+ + L +G        F  G LVDVTG + G+G
Sbjct: 60  TPKPLLAIFKKANIKPAKVIKEFPL-KEGETLELGQEIRVEQVFEKGDLVDVTGKSKGRG 118

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+  MKR +F G   +HG    HR+ GS GCR +PGRV+K K+MAG  G   VTV  LEV
Sbjct: 119 FTSVMKRWDFAGFPKSHG-HRYHRAVGSIGCRTEPGRVWKTKRMAGHYGNETVTVLGLEV 177

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           V +  ++ +IL+KG +PGA  NS + +++S 
Sbjct: 178 VDIIPEKNVILLKGSIPGAP-NSTVFLKNSV 207


>gi|255712065|ref|XP_002552315.1| KLTH0C02002p [Lachancea thermotolerans]
 gi|238933694|emb|CAR21877.1| KLTH0C02002p [Lachancea thermotolerans]
          Length = 268

 Score =  231 bits (589), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 99/215 (46%), Positives = 141/215 (65%), Gaps = 2/215 (0%)

Query: 2   RSGVVARKLGMTCVYNI-EGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           R G ++ K GM   ++   G R+  TVL L+N +V++HR L  NGY A QVG G      
Sbjct: 54  RCGALSLKRGMIPYFDEASGNRVAATVLELNNVEVIMHRNLKDNGYFACQVGFGSKHPSK 113

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS+ M G F+S  V+PK+K+ EFRV+    LLP+G++  PS+F  GQ VD+  ++ GKGF
Sbjct: 114 VSRQMLGHFASKIVNPKEKVVEFRVKDQSGLLPLGTLIKPSFFMPGQYVDLRSISKGKGF 173

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR+NF GL+A+HGVS+SHR  GS G  Q PGRV   KKM G MG  +VT++N +++
Sbjct: 174 AGVMKRYNFKGLKASHGVSVSHRKGGSYGQNQTPGRVLPGKKMPGHMGVQQVTIQNSQIL 233

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            VDD+ G+++VKG V G  K  ++ ++D+ K A  
Sbjct: 234 KVDDENGVVIVKGSVAGP-KGGFVRIQDAIKKAPK 267


>gi|146417733|ref|XP_001484834.1| hypothetical protein PGUG_02563 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 279

 Score =  230 bits (588), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 101/210 (48%), Positives = 136/210 (64%), Gaps = 2/210 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  K GM   Y  +G +   TVL +D+C+V+ ++T + +GY AV VG G  K+KN+
Sbjct: 57  RPGLLGIKRGMITWYTEDGNQFAATVLEVDSCEVMANKTKETDGYTAVMVGLG-TKLKNL 115

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +           VSPK+ + EFRV+ +  L+PVG+     YF VGQLVDV+G++ GKGF+
Sbjct: 116 TPDQLRLAQQAGVSPKRSIREFRVRDESGLIPVGTELRADYFAVGQLVDVSGVSKGKGFA 175

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRH F GL+A+HGVS +HRS GSTG  QDPGRV   KKMAG MG    TV N EV+ 
Sbjct: 176 GVIKRHGFAGLQASHGVSKAHRSAGSTGATQDPGRVLPGKKMAGHMGAVNRTVFNNEVLH 235

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            D   G+++VKG VPG  K S I +RD+ K
Sbjct: 236 ADGDAGILVVKGVVPGPNK-SVIKIRDAKK 264


>gi|19114797|ref|NP_593885.1| mitochondrial ribosomal protein subunit L9 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|74665370|sp|Q9P6P6|RM09_SCHPO RecName: Full=60S ribosomal protein L9, mitochondrial; Flags:
           Precursor
 gi|7708596|emb|CAB90144.1| mitochondrial ribosomal protein subunit L9 (predicted)
           [Schizosaccharomyces pombe]
          Length = 259

 Score =  230 bits (588), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 97/217 (44%), Positives = 133/217 (61%), Gaps = 2/217 (0%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R GV+  K GMT  ++ + G ++P+T+L  D  Q +  RT +K+GY AVQVG+G  K K
Sbjct: 42  LRPGVILVKKGMTNAWDEKTGMQVPLTILQFDRVQAIDVRTKEKHGYYAVQVGSGIRKPK 101

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +++K  +G F S N+ PK  + EFRV+    L+  G++F+  YF   Q VDV G+T GKG
Sbjct: 102 SITKAEQGNFFSHNIYPKMHVREFRVRDASGLVSPGTIFTTDYFKPKQYVDVKGITKGKG 161

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKR  F G  A+HG S+SHR+ GSTG    P RV   +KMAG MG    TVKNL V
Sbjct: 162 FAGVMKRWGFSGGNASHGASLSHRTPGSTGQNTTPSRVLPGRKMAGHMGHRSRTVKNLLV 221

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            +VD     ILVKG +PG  K S + V D+   + + 
Sbjct: 222 WAVDADLECILVKGSIPGPNK-SAVYVTDTINRSTSA 257


>gi|6005862|ref|NP_009139.1| 39S ribosomal protein L3, mitochondrial [Homo sapiens]
 gi|133116|sp|P09001|RM03_HUMAN RecName: Full=39S ribosomal protein L3, mitochondrial; Short=L3mt;
           Short=MRP-L3
 gi|34754|emb|CAA29639.1| unnamed protein product [Homo sapiens]
 gi|13097225|gb|AAH03375.1| Mitochondrial ribosomal protein L3 [Homo sapiens]
 gi|48145557|emb|CAG33001.1| MRPL3 [Homo sapiens]
 gi|119599615|gb|EAW79209.1| mitochondrial ribosomal protein L3 [Homo sapiens]
 gi|312152442|gb|ADQ32733.1| mitochondrial ribosomal protein L3 [synthetic construct]
          Length = 348

 Score =  230 bits (588), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 78/221 (35%), Positives = 117/221 (52%), Gaps = 5/221 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKV 58
            R G++A KLGM  ++  +G++  VT+L + +C V+ + + +  NG MA + VG      
Sbjct: 95  FRVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSR 154

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
              +  +  F+  + + PK+ +  F +  +  + P G+    ++F  GQ VDVT  TIGK
Sbjct: 155 FRKATSILEFYRELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGK 213

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G MKR  F G  ATHG + +HR  G+     D GRV+   KM G+MG    T   L+
Sbjct: 214 GFQGVMKRWGFKGQPATHGQTKTHRRPGAV-ATGDIGRVWPGTKMPGKMGNIYRTEYGLK 272

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           V  ++ K  +I V G VPG  KN  + V+DS   A    GK
Sbjct: 273 VWRINTKHNIIYVNGSVPG-HKNCLVKVKDSKLPAYKDLGK 312


>gi|221220576|gb|ACM08949.1| Mitochondrial 39S ribosomal protein L3 [Salmo salar]
          Length = 342

 Score =  230 bits (588), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 84/210 (40%), Positives = 118/210 (56%), Gaps = 4/210 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59
           R G+VA KLGM  V+   G R  VT+L + +C V+ + + +K +G+ A + VG   A   
Sbjct: 91  RVGLVAVKLGMAPVWTKTGERHVVTMLQVQDCHVLNYLSKEKYDGHTAALVVGGKNASPF 150

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             +      F    V PK+K+  F+V  D+ ++  G+    ++F  GQ VDVT  TIGKG
Sbjct: 151 YKTDEEMEMFRLAGVPPKQKVTTFKVS-DNAIIKPGTPLYAAHFRPGQYVDVTAKTIGKG 209

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR+ F G  A+HG + +HR  G++G   DP +VFK KKM G MG    T   L+V
Sbjct: 210 FQGVMKRYGFKGQPASHGQTKTHRRPGASGPGGDPAKVFKGKKMPGMMGNVFDTAHGLKV 269

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
             V+ K  +I V G VPG  KN  + VRD+
Sbjct: 270 WRVNTKYNVIYVHGSVPG-HKNCLLKVRDT 298


>gi|118586994|ref|ZP_01544426.1| ribosomal protein L3, BL3 [Oenococcus oeni ATCC BAA-1163]
 gi|118432616|gb|EAV39350.1| ribosomal protein L3, BL3 [Oenococcus oeni ATCC BAA-1163]
          Length = 240

 Score =  230 bits (588), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 78/220 (35%), Positives = 115/220 (52%), Gaps = 6/220 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+  +G  IPVTV+      V+  +T + +GY A+Q+G  + +   
Sbjct: 1   MTKGILGRKVGMTQVFTDKGELIPVTVIEALPNVVLQVKTPETDGYSALQLGVFDKRKIA 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G     + +PK+ + E R  + D     G       F  G+ VDV G+T G GF
Sbjct: 61  ANKPEQGHAKKASAAPKRYVREIRDAQGD--YKQGDQVKVDVFAAGEYVDVQGITKGHGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G++KR         HG S  HR  GS G      +VFK K + G+MGG+  T + L V 
Sbjct: 119 QGSIKRLGQSRGPMAHG-SRYHRRPGSMGAI--INKVFKGKLLPGQMGGDLRTAQKLLVA 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
            VD    LIL+KG VPGA K S++ ++ + K     K K+
Sbjct: 176 GVDPANNLILIKGNVPGANK-SFVTIKSTVKPFKASKIKL 214


>gi|147906354|ref|NP_001088168.1| mitochondrial ribosomal protein L3 [Xenopus laevis]
 gi|54035102|gb|AAH84076.1| LOC494992 protein [Xenopus laevis]
          Length = 341

 Score =  230 bits (588), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 74/211 (35%), Positives = 111/211 (52%), Gaps = 5/211 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59
           R G++A KLGM  ++   G +  VT+L + +C V+ +   ++ +G  + + VG       
Sbjct: 91  RVGLIAVKLGMMPIWTKSGEKHAVTMLQVRDCHVIKYTPKEEFDGKTSSLTVGGKNVSPF 150

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             S+ +   +    V PK+K+  F+V  D+ ++  G+    ++F  GQ VDVT  TIGKG
Sbjct: 151 YKSESVMEMYREAGVPPKQKISIFKVS-DNAIIKPGTPLYAAHFRPGQFVDVTAKTIGKG 209

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR  + G  A+HG + +HR  G+     DP RVF   KM GRMG    T   L+V
Sbjct: 210 FQGVMKRWGYKGQPASHGQTKTHRRPGAI-SSGDPARVFPGTKMPGRMGNIYRTSYALKV 268

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
             V+ K  +I V G VPG   N  + V D+ 
Sbjct: 269 WRVNTKHNIIYVNGSVPG-HTNCLVKVTDTK 298


>gi|224370691|ref|YP_002604855.1| 50S ribosomal protein L3 [Desulfobacterium autotrophicum HRM2]
 gi|259647408|sp|C0Q9X3|RL3_DESAH RecName: Full=50S ribosomal protein L3
 gi|223693408|gb|ACN16691.1| RplC [Desulfobacterium autotrophicum HRM2]
          Length = 207

 Score =  230 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 76/210 (36%), Positives = 115/210 (54%), Gaps = 3/210 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++  +G  +PVTV+    C V   +    +GY A+Q+G  E  +  
Sbjct: 1   MFKGMLGKKIGMTSIFAADGTLVPVTVVRFGPCVVTQVKAEKTDGYNALQLGFDERALAK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP  G FS    +    + EFRV+  D+   VG       F +G  V+V+G + G+GF
Sbjct: 61  CNKPKVGHFSKSGSTGFNVVREFRVENTDE-FEVGQNIGLDGFAIGDKVNVSGTSKGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRH F     THG   +HR  GS GC   P RV K ++M G MG +R TVKNLE++
Sbjct: 120 AGTIKRHGFSRGPETHGC-RNHRKPGSIGCSAWPARVVKGRRMPGHMGVDRKTVKNLEII 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
            +     L+++KG VPG  K   + +R + 
Sbjct: 179 DIRPDENLVMIKGPVPG-WKTGLLEIRKAV 207


>gi|255022702|ref|ZP_05294688.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL J1-208]
          Length = 210

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 79/213 (37%), Positives = 121/213 (56%), Gaps = 5/213 (2%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++ RK      +       IPVTV+      V+  +T++ +GY AVQ+G  + +  
Sbjct: 1   MTKGILGRKXXXXXXFLLKTDELIPVTVIEAAQNVVLQKKTVETDGYEAVQIGFEDKRAI 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             +KP +G  +  N +PK+ + EFR   + D   +G+      F  G ++D TG++ GKG
Sbjct: 61  LSNKPEQGHVAKANTTPKRFIREFR-DVNLDEYEIGAEVKVDVFAEGDIIDATGVSKGKG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KRH        HG S  HR  GS G    P RVFKNK + GRMGG ++T++NLE+
Sbjct: 120 FQGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQITIQNLEI 177

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V VD ++ ++LVKG VPGAKK + + ++ + K+
Sbjct: 178 VKVDVEKNVLLVKGNVPGAKK-ALVQIKTATKA 209


>gi|73748316|ref|YP_307555.1| 50S ribosomal protein L3 [Dehalococcoides sp. CBDB1]
 gi|147669096|ref|YP_001213914.1| 50S ribosomal protein L3 [Dehalococcoides sp. BAV1]
 gi|289432364|ref|YP_003462237.1| 50S ribosomal protein L3 [Dehalococcoides sp. GT]
 gi|109893426|sp|Q3ZZM4|RL3_DEHSC RecName: Full=50S ribosomal protein L3
 gi|189042842|sp|A5FRY9|RL3_DEHSB RecName: Full=50S ribosomal protein L3
 gi|73660032|emb|CAI82639.1| ribosomal protein L3 [Dehalococcoides sp. CBDB1]
 gi|146270044|gb|ABQ17036.1| LSU ribosomal protein L3P [Dehalococcoides sp. BAV1]
 gi|288946084|gb|ADC73781.1| 50S ribosomal protein L3 [Dehalococcoides sp. GT]
          Length = 205

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 126/211 (59%), Gaps = 6/211 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++  +G+  PVT++    C VV  +T  ++GY AVQ+G G+AK  +
Sbjct: 1   MIQGIIGKKIGMTQIFQEDGKAQPVTLVEAGPCVVVQVKTEKQDGYEAVQLGYGKAK--H 58

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++  ++G          K L E  V  D   + VG   + S F  G+ +D +G++ G+GF
Sbjct: 59  ITSAVKGQCR--GFGEFKVLREVDVD-DIAAVSVGDQITVSDFKDGEKIDASGVSRGRGF 115

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG +KR +F G   THG S  HR+ GS G    PGR++K K MAG MG   VT++NL V+
Sbjct: 116 SGVVKRWHFAGGPKTHGQSDRHRAPGSIGSTTTPGRIYKGKHMAGHMGNEAVTIRNLVVL 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D ++ L++VKG +PG  KN+ IL++ + K
Sbjct: 176 KTDAEKNLLMVKGAIPGG-KNTIILIKKTGK 205


>gi|269101057|ref|YP_003289205.1| 50S ribosomal protein L3 [Ectocarpus siliculosus]
 gi|266631565|emb|CAV31236.1| Chloroplast 50S ribosomal protein L3 [Ectocarpus siliculosus]
 gi|270118695|emb|CAT18766.1| Chloroplast 50S ribosomal protein L3 [Ectocarpus siliculosus]
          Length = 207

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 81/206 (39%), Positives = 116/206 (56%), Gaps = 2/206 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+   K+GMT +++  G  +PVTV+ +  C +   +T   NGY A+Q+G  +     
Sbjct: 1   MSIGIFGNKIGMTQIFDKNGLALPVTVVSVGPCFITQLKTEKTNGYDAIQIGYSKGHTSK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK   G      +SP   L E+RV  D     +G + +   F VGQ V+VTG +IGKGF
Sbjct: 61  FSKAELGHLEKNGLSPLYHLCEYRV-NDLKNYSLGQILTVDNFQVGQFVNVTGKSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRH F     THG S +HR+ GS G    PGRVF  K MAG++G  ++TV  LE++
Sbjct: 120 SGNQKRHKFKRGPMTHG-SKNHRAPGSIGPGTTPGRVFPGKLMAGQLGAKKITVSKLEIL 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
            +D K+ L+++KG VPG   N   ++
Sbjct: 179 GIDSKQNLLILKGSVPGKPGNLLNII 204


>gi|225710684|gb|ACO11188.1| Mitochondrial 39S ribosomal protein L3 [Caligus rogercresseyi]
          Length = 342

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 83/210 (39%), Positives = 118/210 (56%), Gaps = 4/210 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59
           R G+VA KLGM  V+   G R  VT+L + +C V+ + + +K +G+ A + VG   A   
Sbjct: 91  RVGLVAVKLGMAPVWTKTGERHVVTMLQVQDCHVLNYLSKEKYDGHTAALVVGGKNASPF 150

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             +      F    V PK+K+  F+V  D+ ++  G+    ++F  GQ VDVT  TIGKG
Sbjct: 151 YKTDEEMEMFRLAGVPPKQKVTTFKVS-DNAIIKPGTPLYAAHFRPGQYVDVTAKTIGKG 209

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR+ F G  A+HG + +HR  G++G   DP +VFK KKM G MG    T   L+V
Sbjct: 210 FQGVMKRYGFKGQPASHGQTKTHRRPGASGPGGDPAKVFKGKKMPGMMGNVFDTAHGLKV 269

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
             V+ +  +I V G VPG  KN  + VRD+
Sbjct: 270 WRVNTRYNVIYVHGSVPG-HKNCLLKVRDT 298


>gi|41053377|ref|NP_956301.1| 39S ribosomal protein L3, mitochondrial [Danio rerio]
 gi|33416933|gb|AAH55650.1| Mitochondrial ribosomal protein L3 [Danio rerio]
 gi|94734481|emb|CAK11310.1| mitochondrial ribosomal protein L3 [Danio rerio]
          Length = 319

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 84/220 (38%), Positives = 117/220 (53%), Gaps = 4/220 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYM-AVQVGAGEAKVK 59
           R G+VA KLGM  V++  G R  VT+L + +C VV H + +  NG+  A+ VG       
Sbjct: 70  RVGLVAIKLGMMPVWSKSGERHVVTMLQVKDCHVVKHLSKEDYNGHTSALVVGGKNVSPF 129

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +        F +  + PK+KL  F V  D+ ++  G+    ++F  GQ VDVT  TIGKG
Sbjct: 130 HRPVGYLEIFQNAGIPPKQKLTTFCVT-DNAIIKPGTPLYAAHFRPGQYVDVTAKTIGKG 188

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR  F G  A+HG + +HR  G+ G   DP +VFK  KM GRMG    T   L++
Sbjct: 189 FQGVMKRWGFKGQPASHGQTKTHRRPGALGPGGDPAKVFKGTKMPGRMGNVYNTNFGLKI 248

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
             V+ K  ++ V G VPG  +N  + VRD+       K K
Sbjct: 249 WRVNTKYNILYVNGSVPG-HRNCLVKVRDTVLPTRLEKNK 287


>gi|268316408|ref|YP_003290127.1| 50S ribosomal protein L3 [Rhodothermus marinus DSM 4252]
 gi|262333942|gb|ACY47739.1| ribosomal protein L3 [Rhodothermus marinus DSM 4252]
          Length = 210

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 90/211 (42%), Positives = 118/211 (55%), Gaps = 6/211 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVKNV 61
           SG++ RK+GMT V++  G  IP T++  +   VV  +T + K+GY AVQ+G GE K K  
Sbjct: 2   SGMLGRKIGMTQVFDQAGNCIPCTIIQAEPNAVVQVKTAEGKDGYEAVQLGYGERKPKRT 61

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGF 120
           ++ M G F    VSPK+ L EF+    D  +  G        F  G+L+DV G+T G+GF
Sbjct: 62  TRAMLGHFEKAGVSPKQVLREFKNFVLD--VKPGDEVRVEQLFREGELIDVVGITKGRGF 119

Query: 121 SGAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            G +KRH FGG    THG     R+ GS G    P  VFK  +MAGRMG  RV VKNL V
Sbjct: 120 QGVVKRHGFGGVGARTHGQHNRERAPGSIGASSFPSHVFKGMRMAGRMGNQRVKVKNLRV 179

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           V +  +  LILVKG VPG   N  + +    
Sbjct: 180 VRIFPEHNLILVKGAVPGPV-NGIVELYKKV 209


>gi|148284214|ref|YP_001248304.1| 50S ribosomal protein L3 [Orientia tsutsugamushi str. Boryong]
 gi|146739653|emb|CAM79442.1| 50S ribosomal protein L3 [Orientia tsutsugamushi str. Boryong]
          Length = 229

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 107/211 (50%), Positives = 143/211 (67%), Gaps = 2/211 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           RSG++A KLGM+  ++  GR++ +T+L +D CQV+ H+ + K+GY AV +G        V
Sbjct: 18  RSGLIAEKLGMSSKFDESGRKVAITLLKVDVCQVLWHKLVSKDGYNAVILGYKNISPFKV 77

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KPM   FS   + PK  + EF+V +D  +L + S+   SYF VGQ VDV G+TIGKGF+
Sbjct: 78  KKPMHSIFSRAKIEPKAIIKEFKVAEDK-MLEIASILDASYFRVGQYVDVRGVTIGKGFA 136

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           GAMKRH F GL A+HGVSISHRSHGSTG R  PGR FKNKKMAG MG    T++NL V S
Sbjct: 137 GAMKRHGFRGLEASHGVSISHRSHGSTGNRAYPGRTFKNKKMAGHMGVRFATIQNLRVDS 196

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VD ++ L++++G +PG K  S + + DS K 
Sbjct: 197 VDLEKRLLVIQGSIPG-KSGSIVYITDSIKK 226


>gi|254674251|emb|CBA10035.1| 50S ribosomal protein L3 [Neisseria meningitidis alpha275]
          Length = 196

 Score =  230 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 89/193 (46%), Positives = 117/193 (60%), Gaps = 2/193 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V RK+GMT V++ +G  +PVTVL +   +V   ++ D +GY AVQV  G+ K   
Sbjct: 1   MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           V+K   G F+   V   + L EF + ++    L  G   + S F VGQLVDVTG + GKG
Sbjct: 61  VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG +KRHNFG  R +HG S SHR  GS G  QDPGRVF  K+MAG+ G  +     L+V
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGTPKH-CSKLKV 179

Query: 180 VSVDDKRGLILVK 192
           V VD +R L+ VK
Sbjct: 180 VRVDAERQLLWVK 192


>gi|172056140|ref|YP_001812600.1| 50S ribosomal protein L3 [Exiguobacterium sibiricum 255-15]
 gi|226725176|sp|B1YGV0|RL3_EXIS2 RecName: Full=50S ribosomal protein L3
 gi|171988661|gb|ACB59583.1| ribosomal protein L3 [Exiguobacterium sibiricum 255-15]
          Length = 208

 Score =  230 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 131/212 (61%), Gaps = 5/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT ++N  G  +PVTV+ ++   V+  +T++ +GY AVQ+G G+ K   
Sbjct: 1   MAKGILGTKLGMTQIFNESGEVVPVTVVSVEGNVVLQLKTMEVDGYEAVQLGFGDIKEGR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  + +PK+ + E R    D    +G       F  G++VDVTG + GKGF
Sbjct: 61  QNKPQKGHAAKASATPKRFIKEIRTSVTD--FEIGQEIKADTFAAGEMVDVTGTSKGKGF 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +GA+KRHN       HG S  HR  GS G    P RVFK K + GRMGG +VTV+NLE+V
Sbjct: 119 AGAIKRHNQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGEQVTVQNLEIV 176

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +RGL+LVKG +PGA+K S ++V+ + K 
Sbjct: 177 KVDVERGLLLVKGAIPGARK-SQVVVKTAVKG 207


>gi|57234686|ref|YP_181218.1| 50S ribosomal protein L3 [Dehalococcoides ethenogenes 195]
 gi|109893425|sp|Q3Z981|RL3_DEHE1 RecName: Full=50S ribosomal protein L3
 gi|57225134|gb|AAW40191.1| ribosomal protein L3 [Dehalococcoides ethenogenes 195]
          Length = 205

 Score =  230 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 127/211 (60%), Gaps = 6/211 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++  +G+  PVT++    C VV  +T  ++GY AVQ+G G+AK  +
Sbjct: 1   MIQGIIGKKIGMTQIFQEDGKAQPVTLVEAGPCVVVQVKTEKQDGYEAVQLGYGKAK--H 58

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++  ++G          K L E  V  D   + VG   + S F  G+ +D +G++ G+GF
Sbjct: 59  ITSAVKGQCR--GFGEFKVLREVDVD-DIAAVNVGDQITVSDFKDGEKIDASGVSRGRGF 115

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR +F G   THG S  HR+ GS      PGR++K K+MAG MG + VT++NL V+
Sbjct: 116 AGVVKRWHFAGGPKTHGQSDRHRAPGSISSTTTPGRIYKGKRMAGHMGNDAVTIRNLVVL 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D ++ L++VKG +PG  KN+ IL++ + K
Sbjct: 176 KTDAEKNLLMVKGAIPGG-KNTIILIKKTGK 205


>gi|225560374|gb|EEH08655.1| 50S ribosomal protein L3 [Ajellomyces capsulatus G186AR]
          Length = 301

 Score =  230 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 91/215 (42%), Positives = 139/215 (64%), Gaps = 3/215 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GMT +++   G+RIP T+L LD  QV+ H+TL KNGY AVQ+G G    +
Sbjct: 71  LRTGTLAIKKGMTAIFDLETGKRIPCTILQLDRVQVISHKTLRKNGYYAVQIGCGWKHER 130

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            V++PM G F++  V+PK+ + EFRV+ ++ LLP+G + + ++F  GQ VD    + G G
Sbjct: 131 AVTRPMLGHFAANGVAPKRHIHEFRVKDENGLLPIGEMINANWFQEGQYVDARSNSRGMG 190

Query: 120 FSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKRH F G   +HGVS++HR    S   +    RV+  KKMAG MG  +VT++NL+
Sbjct: 191 FAGVMKRHGFHGQDRSHGVSLTHRSMGSSGPGQGGGSRVYPGKKMAGNMGNKQVTLQNLK 250

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V+ VD ++G+++V G V G  K   + ++D+ K  
Sbjct: 251 VLKVDAEKGIVVVNGSVSGP-KGCIVKLQDALKKP 284


>gi|251772490|gb|EES53056.1| Ribosomal protein L3 [Leptospirillum ferrodiazotrophum]
          Length = 204

 Score =  230 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 89/204 (43%), Positives = 125/204 (61%), Gaps = 3/204 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++  K+GMT +Y   G+ IPVTV+ +  C+V+  +T +K+ Y AVQ+G G  K  +++KP
Sbjct: 4   IIGEKIGMTQIYLPNGKSIPVTVVKVGPCEVIQVKTKEKDRYSAVQLGYGIVKPVSLNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           +RG F   + +  + + E  V    D  P GS++   +F  G+LV  TGMT GKGF+G M
Sbjct: 64  LRGHFQKYSQNTYRTIRE--VVILGDPPPSGSIYGADFFKPGELVSATGMTKGKGFAGVM 121

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH+F G  ATHG S+ HR  GS G    P RV KNKK+ G MG  +VT+KNLEVV V  
Sbjct: 122 KRHHFRGGDATHG-SMFHREPGSIGSSAYPSRVLKNKKLPGHMGHKKVTIKNLEVVEVKA 180

Query: 185 KRGLILVKGCVPGAKKNSWILVRD 208
           +  L+L+KG VPG      +  +D
Sbjct: 181 EANLVLLKGAVPGHPGTILVFKKD 204


>gi|269122979|ref|YP_003305556.1| 50S ribosomal protein L3 [Streptobacillus moniliformis DSM 12112]
 gi|268314305|gb|ACZ00679.1| ribosomal protein L3 [Streptobacillus moniliformis DSM 12112]
          Length = 208

 Score =  230 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 85/209 (40%), Positives = 123/209 (58%), Gaps = 4/209 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ +K+GMT ++    + IPVTV+      VV  +T++K GY ++ +   E + K V+KP
Sbjct: 2   ILGKKIGMTQIF-ENEKLIPVTVIEAGPNFVVQTKTVEKEGYTSITLAYDEKREKLVNKP 60

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
             G F    ++ KK L EF+V+   +   +G           + VD+ G++ GKG +G M
Sbjct: 61  EMGVFKKAGITAKKFLKEFKVES-VEEFALGQELKVDVLEGIEFVDIQGISKGKGTAGVM 119

Query: 125 KRHNFGGLRATHGVSISHRSHGST-GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           KRHNFGG RATHGVS +HR  GS  G       V K KKMAGR+G   VTV+NL+VV  D
Sbjct: 120 KRHNFGGNRATHGVSRNHRLGGSNAGGAASNSNVPKGKKMAGRLGNENVTVQNLKVVKFD 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            +  L+LVKG VPG  KN +++++ S K 
Sbjct: 180 VENNLLLVKGAVPGP-KNGYLVIKKSIKK 207


>gi|62857890|ref|NP_001016594.1| mitochondrial ribosomal protein L3 [Xenopus (Silurana) tropicalis]
 gi|89272068|emb|CAJ81305.1| mitochondrial ribosomal protein L3 [Xenopus (Silurana) tropicalis]
 gi|134024406|gb|AAI35276.1| mitochondrial ribosomal protein L3 [Xenopus (Silurana) tropicalis]
          Length = 341

 Score =  230 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 77/211 (36%), Positives = 109/211 (51%), Gaps = 5/211 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59
           R GV+A KLGM  ++   G R  VT+L + +C VV +   ++ +G  A + VG       
Sbjct: 91  RVGVIAVKLGMMPIWTKSGDRHAVTMLQVRDCHVVKYTPKEEFDGKTASLTVGGKNVSPF 150

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
              +     +    V PK+K+  F+V  D+ +L  G+    ++F  GQ VD+T  TIGKG
Sbjct: 151 YKPESAMELYREAGVPPKQKISIFKVS-DNAILKPGTPLYAAHFRPGQFVDITAKTIGKG 209

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR  + G  A+HG + +HR  G+     DP RVF   KM GRMG    T   L+V
Sbjct: 210 FQGVMKRWGYKGQPASHGQTKTHRRPGAI-SSGDPARVFPGTKMPGRMGNVYRTSYALKV 268

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
             V+ K  +I V G VPG   N  + V D+ 
Sbjct: 269 WRVNTKHNIIYVNGSVPG-HTNCLVKVTDTK 298


>gi|302908346|ref|XP_003049847.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256730783|gb|EEU44134.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 333

 Score =  230 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 98/219 (44%), Positives = 137/219 (62%), Gaps = 3/219 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+GV+A K GMT V+ +   R+P TVL LD  QV+ ++T +KNGY AVQ+G+G    +N
Sbjct: 76  LRTGVLAIKKGMTSVF-VGKVRVPCTVLQLDQVQVIANKTREKNGYWAVQIGSGSRDGRN 134

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+ PM G++ +  ++PK  L EF V+    LLPVG    P +F  GQ VDV   + G GF
Sbjct: 135 VTSPMLGYYEAKGIAPKADLAEFMVRDQSGLLPVGVQILPDWFKKGQYVDVKSRSRGMGF 194

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179
           +G MKRH F G  A+HG S +HR+ G+TG  Q  G RV   KKM GRMG   VTV+NL+V
Sbjct: 195 AGGMKRHGFSGQEASHGNSKNHRTIGTTGPSQGGGSRVLPGKKMPGRMGNEFVTVQNLKV 254

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           + VD++ G++LV G + G  K   + ++DS K     + 
Sbjct: 255 MMVDNELGVVLVSGPIAGP-KGRVVRLQDSKKRKAPPQP 292


>gi|328872429|gb|EGG20796.1| ribosomal protein L3 [Dictyostelium fasciculatum]
          Length = 333

 Score =  230 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 106/208 (50%), Positives = 138/208 (66%), Gaps = 3/208 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G + +KLGMT VY ++   IPVTV+ L + QVV  +    +G  AVQVGAGE K+KN+
Sbjct: 64  RVGAIGKKLGMTTVY-VDHVAIPVTVIELPDNQVVQVKRKVNDGSNAVQVGAGEIKLKNI 122

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
              ++G F+  +V PK+ + EF+V K    + VG+     +F  GQLV V G + GKGF+
Sbjct: 123 GGTLKGHFAKADVPPKRVVMEFKVTKG-GFMDVGTSIDARHFVPGQLVKVQGTSTGKGFA 181

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR NF GL ATHGVS +HRS GSTGCRQ PGRVFK KKM GR+GG   TV NL+VV 
Sbjct: 182 GGMKRWNFSGLLATHGVSKTHRSIGSTGCRQTPGRVFKGKKMPGRLGGQSSTVNNLQVVK 241

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
           ++ +  +I+VKG VPG K   ++ V DS
Sbjct: 242 INSELNVIMVKGAVPG-KNGGYLRVTDS 268


>gi|66805433|ref|XP_636449.1| ribosomal protein L3, mitochondrial [Dictyostelium discoideum AX4]
 gi|60464827|gb|EAL62946.1| ribosomal protein L3, mitochondrial [Dictyostelium discoideum AX4]
          Length = 351

 Score =  229 bits (585), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 100/208 (48%), Positives = 135/208 (64%), Gaps = 2/208 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G + +K+GM   Y  +    PVTV+ L N QV   +    +G   +QVGA E K+KNV
Sbjct: 66  RVGAIGKKVGMLTTYIGD-IAYPVTVIQLPNNQVTQIKRKVNDGVDMIQVGADEIKLKNV 124

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SK ++G F+  NV PK+ L EFRV ++   L +G+   P +F  GQL+ V G   GKGF+
Sbjct: 125 SKTLQGHFAKANVPPKRVLMEFRVTRNAMNLELGTPILPKHFLPGQLITVKGTNTGKGFA 184

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR +F G  ATHGVS++HR+ GSTGCRQ PGRVFK +KM GR+GG   TVKNL+V+ 
Sbjct: 185 GGMKRWHFSGQPATHGVSLTHRAIGSTGCRQTPGRVFKGRKMPGRLGGKSCTVKNLQVLK 244

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
           ++ +   +LVKG VPG KK  ++ + DS
Sbjct: 245 INTEMNCLLVKGAVPG-KKGGYLKITDS 271


>gi|270307842|ref|YP_003329900.1| ribosomal protein L3 [Dehalococcoides sp. VS]
 gi|270153734|gb|ACZ61572.1| ribosomal protein L3 [Dehalococcoides sp. VS]
          Length = 205

 Score =  229 bits (585), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 127/211 (60%), Gaps = 6/211 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++  +G+  PVT++    C VV  +T  ++GY AVQ+G G+AK  +
Sbjct: 1   MIQGIIGKKIGMTQIFQEDGKAQPVTLVEAGPCVVVQVKTEKQDGYEAVQLGYGKAK--H 58

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++  ++G          K L E  V  D   + VG   + S F  G+ +D +G++ G+GF
Sbjct: 59  ITSAVKGQCR--GFGEFKVLREVDVD-DIATVNVGDQITVSDFKDGEKIDASGVSRGRGF 115

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR +F G   THG S  HR+ GS      PGR++K K+MAG MG + VT++NL V+
Sbjct: 116 AGVVKRWHFAGGPKTHGQSDRHRAPGSISSTTTPGRIYKGKRMAGHMGNDAVTIRNLVVL 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             D ++ L++VKG +PG  KN+ IL++ + K
Sbjct: 176 KTDAEKNLLMVKGAIPGG-KNTIILIKKTGK 205


>gi|326437537|gb|EGD83107.1| hypothetical protein PTSG_03748 [Salpingoeca sp. ATCC 50818]
          Length = 307

 Score =  229 bits (585), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 98/214 (45%), Positives = 143/214 (66%), Gaps = 2/214 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++ARKLGMT  + + G R+P+T   +++ QVV H+T+D++GY A+++GA   + + V
Sbjct: 63  RTGILARKLGMTQTFTLWGERVPLTAFQIEDLQVVEHKTVDRDGYSAMRLGAVNLEPRKV 122

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP+ G F    + PK+ + EFRV +D  +LP+G+  S S+F  GQ VDV G+TIGKGF 
Sbjct: 123 KKPVLGQFRKHKLPPKQHVAEFRVTEDC-ILPIGTHISCSHFIPGQYVDVQGVTIGKGFQ 181

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF G+ A+HGV+++HR  G  G  QDPGRV+K K+M GRMGG +     L+V  
Sbjct: 182 GVMKRHNFKGMPASHGVTLTHRKAGGLGGGQDPGRVWKGKRMEGRMGGVKRYQFGLQVYQ 241

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           +D +  L+ V G  PGA KNS + +RD+     +
Sbjct: 242 IDTRYNLLYVVGSAPGA-KNSIVKIRDAMYKPPS 274


>gi|299139130|ref|ZP_07032306.1| 50S ribosomal protein L3 [Acidobacterium sp. MP5ACTX8]
 gi|298598810|gb|EFI54972.1| 50S ribosomal protein L3 [Acidobacterium sp. MP5ACTX8]
          Length = 242

 Score =  229 bits (585), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 75/220 (34%), Positives = 122/220 (55%), Gaps = 7/220 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVKNV 61
           +G++ +K+GMT +++  G   PVTVL +  C +   +T   +GY A Q+G  E  K   +
Sbjct: 4   TGILGKKIGMTQLFDDRGDIHPVTVLKVGPCVITQLKTQQTDGYSAAQIGLVEFVKASKI 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEF---RVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           +K M G F+  NV P +++ E     V++ ++    G   +   F   + VDV G + G+
Sbjct: 64  NKAMTGHFAKSNVPPVREIREVQIEFVEEGEEAPKAGDRVTVEIFNETRFVDVIGNSKGR 123

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF+G ++RH FGG   +HG     +  GS G    P RVF  ++M G MG N+VTV+NL 
Sbjct: 124 GFAGVIRRHGFGGGPKSHGHMF--QVQGSIGASSFPSRVFPGQRMPGHMGTNQVTVRNLR 181

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           +  +D +  L+LV+G VPGA ++ ++LV  +       +G
Sbjct: 182 IRGIDVEDNLLLVEGAVPGA-RDGYVLVSKAVAPPRERRG 220


>gi|260909750|ref|ZP_05916444.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 472 str. F0295]
 gi|260636175|gb|EEX54171.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 472 str. F0295]
          Length = 204

 Score =  229 bits (585), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 81/205 (39%), Positives = 118/205 (57%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V++ +G+ +P TV+    C V   +T++ +GY AVQ+  GEAK    +K
Sbjct: 3   GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVETDGYNAVQLAYGEAKKNRTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
            M G F     +PKK L EF+   +     +G   +   F   + VDV G + GKGF G 
Sbjct: 63  AMAGIFDKAGTTPKKHLAEFKFDTE---YNLGDTITVDLFEGAEFVDVVGTSKGKGFQGV 119

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  + THG     R  GS G    P +VFK  +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQTTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLKVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  LILVKG V G   ++ ++ +
Sbjct: 180 IPEHNLILVKGSVAGCNGSTLLIKK 204


>gi|256544506|ref|ZP_05471879.1| 50S ribosomal protein L3 [Anaerococcus vaginalis ATCC 51170]
 gi|256399831|gb|EEU13435.1| 50S ribosomal protein L3 [Anaerococcus vaginalis ATCC 51170]
          Length = 209

 Score =  229 bits (585), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 88/208 (42%), Positives = 125/208 (60%), Gaps = 3/208 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           +   K+GMT V + +G   PVTVL  D   +V  ++ + +GY ++Q+G  + K KNV KP
Sbjct: 4   IFTTKVGMTQVIDEDGVVTPVTVLKADENVIVQVKSEEVDGYNSIQIGYHDKKEKNVKKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           ++G F     S K+ L E R+ +  +L P G   S   F  G+LVD+T ++ GKG  GA+
Sbjct: 64  IKGHFDKAGASYKRFLREVRLDEKSELNP-GDTLSVDQFEEGELVDITAISKGKGTQGAI 122

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR N+G   A+HG S SHR  G+     DP RVFK +K +G+MG  RVTV+NL+VV V+ 
Sbjct: 123 KRWNYGRGPASHG-SKSHRVAGARAAGSDPARVFKGRKGSGKMGHERVTVQNLKVVKVNT 181

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +   ILVKG VPG  K   + V+ + KS
Sbjct: 182 EDSYILVKGAVPGP-KGGLVQVKQATKS 208


>gi|330819132|ref|XP_003291618.1| hypothetical protein DICPUDRAFT_39301 [Dictyostelium purpureum]
 gi|325078183|gb|EGC31848.1| hypothetical protein DICPUDRAFT_39301 [Dictyostelium purpureum]
          Length = 340

 Score =  229 bits (585), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 100/208 (48%), Positives = 138/208 (66%), Gaps = 2/208 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G + +K+GM   Y I     PVTV+ + N QV   +   K+G   VQ+GA E ++KNV
Sbjct: 58  RMGAIGKKVGMMTTY-IGAEAYPVTVIQIPNNQVTQVKRKIKDGANMVQIGADEIRMKNV 116

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP+RG F+  NV+PK+ L EF+V  +   + +G+     +F  GQLV V G + GKGF+
Sbjct: 117 PKPLRGHFAKANVTPKRILMEFKVTNNALNIDLGTPILARHFVPGQLVTVKGKSSGKGFA 176

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR NF G  ATHGVS++HRS G+TG RQ PGRVFKN+KM GR+GG   TVKNL+++ 
Sbjct: 177 GGMKRWNFRGQPATHGVSLTHRSIGATGNRQTPGRVFKNRKMPGRLGGESCTVKNLQILK 236

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
           ++++   I+VKG VPG KK S++ + DS
Sbjct: 237 INNELNCIMVKGAVPG-KKGSYLKIIDS 263


>gi|238898927|ref|YP_002924609.1| 50S ribosomal subunit protein L3 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|259646549|sp|C4K7B8|RL3_HAMD5 RecName: Full=50S ribosomal protein L3
 gi|229466687|gb|ACQ68461.1| 50S ribosomal subunit protein L3 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 210

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 96/210 (45%), Positives = 135/210 (64%), Gaps = 1/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +KLGMT ++  +G  IPVTV+ +   +V   + LD +GY+A+Q+  G  K   V+
Sbjct: 2   KGLVGKKLGMTRIFTKDGISIPVTVIEIKANRVTQIKNLDSDGYLALQITTGTKKASRVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+  NV   + L+EFRV + D  + +G  F  S F  G +VDVTG + GKGFSG
Sbjct: 62  KPKAGHFAKANVEAGRGLWEFRVSEQDATVFLGHTFEVSMFKPGDIVDVTGKSKGKGFSG 121

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    A+HG S+SHR  GS G  Q PG+VFK KKM+G++G  RVT++NLEVV V
Sbjct: 122 TVKRWNFRTQDASHGNSLSHRVPGSIGQNQTPGKVFKGKKMSGQLGNERVTIQNLEVVRV 181

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D  R ++L+KG VPGA     ++V+ + K+
Sbjct: 182 DVVREILLIKGGVPGAV-GKDVIVKLAVKA 210


>gi|294507051|ref|YP_003571109.1| 50S ribosomal protein L3 [Salinibacter ruber M8]
 gi|294343379|emb|CBH24157.1| 50S ribosomal protein L3 [Salinibacter ruber M8]
          Length = 208

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 81/201 (40%), Positives = 111/201 (55%), Gaps = 4/201 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M SG++ +K+GMT V++ EG  +  TV+      V   ++  ++GY AVQ+G    K KN
Sbjct: 1   MSSGLIGKKVGMTSVFDDEGNNVACTVVEAGPNVVTQVKSEGRDGYSAVQLGFDNVKEKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119
           V++ M G F      PK+ L EFR   DD  + +G V      F   + +DV G++ GKG
Sbjct: 61  VTQAMLGHFEKAGCPPKRMLSEFRDFGDD--VDLGDVVRVEDLFQEDERIDVVGVSKGKG 118

Query: 120 FSGAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           F G +KRH F G    THG S   R  GS G   DP RVFK  +MAG+ GG R  ++NL 
Sbjct: 119 FQGVVKRHGFSGVGMMTHGQSDRQRHPGSIGASADPSRVFKGVRMAGQTGGERTKIQNLR 178

Query: 179 VVSVDDKRGLILVKGCVPGAK 199
           VV +   +  IL+ G VPG K
Sbjct: 179 VVRILADQNAILIHGSVPGPK 199


>gi|257064320|ref|YP_003143992.1| LSU ribosomal protein L3P [Slackia heliotrinireducens DSM 20476]
 gi|256791973|gb|ACV22643.1| LSU ribosomal protein L3P [Slackia heliotrinireducens DSM 20476]
          Length = 206

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 88/209 (42%), Positives = 121/209 (57%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M + +  +K+GMT ++N + + +P TV+  +  +V   +T D +GY AVQ+G G  K + 
Sbjct: 1   MINAIYGKKIGMTQLFNEDEKVVPCTVIVAEPNKVCQIKTTDTDGYEAVQLGFGAIKPQK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM G F+ +   P + L E RV+   D   VG + +   F   + V VTG +IGKGF
Sbjct: 61  VNKPMAGHFAKLGTEPTRYLREVRVENAAD-YKVGDLQTVEAFADVKKVHVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH F G    HG    HR+ GS G    P RV K  +M G MG N VT KNLEVV
Sbjct: 120 QGVIKRHGFRGGPGGHGAH-FHRAPGSVGMCATPSRVLKGVRMPGHMGCNTVTTKNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            +D ++ LILVKG VPGA K   + VR +
Sbjct: 179 RIDAEQNLILVKGAVPGA-KGGIVRVRMA 206


>gi|122692439|ref|NP_001073786.1| 39S ribosomal protein L3, mitochondrial [Bos taurus]
 gi|88932613|sp|Q3ZBX6|RM03_BOVIN RecName: Full=39S ribosomal protein L3, mitochondrial; Short=L3mt;
           Short=MRP-L3
 gi|73586745|gb|AAI03048.1| Mitochondrial ribosomal protein L3 [Bos taurus]
 gi|296490939|gb|DAA33052.1| 39S ribosomal protein L3, mitochondrial [Bos taurus]
          Length = 348

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 75/216 (34%), Positives = 115/216 (53%), Gaps = 5/216 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGY-MAVQVGAGEAKVK 59
           R G+VA KLGM  ++  +G++  VT+L + +C V+ +   +  NG   A+ VG       
Sbjct: 96  RVGLVALKLGMMPLWTKDGKKHVVTLLQVQDCHVLKYTPKENHNGKMAALTVGGKTVSRF 155

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           + S  +  F+  + + PK+K+  F V  D+ ++  G+    ++F  GQ VDVT  TIGKG
Sbjct: 156 HKSTSILEFYQELGLPPKQKIKMFNVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 214

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR  F G  ATHG + +HR  G+     D  RV+   KM G++G    T   L+V
Sbjct: 215 FQGVMKRWGFKGQPATHGQTKTHRRPGAI-STGDVARVWPGTKMPGQLGNVDRTAFGLKV 273

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             ++ K  +I V G VPG  +N  + ++DS   A  
Sbjct: 274 WRINTKHNIIYVNGSVPG-HRNCLVKIKDSVLPAYK 308


>gi|298373698|ref|ZP_06983687.1| 50S ribosomal protein L3 [Bacteroidetes oral taxon 274 str. F0058]
 gi|298274750|gb|EFI16302.1| 50S ribosomal protein L3 [Bacteroidetes oral taxon 274 str. F0058]
          Length = 206

 Score =  229 bits (584), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 81/205 (39%), Positives = 121/205 (59%), Gaps = 5/205 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+  P TV+ +  C V   +T++K+GY A Q+G  E K K+ +K
Sbjct: 3   GLIGKKVGMTSVFSADGKNTPCTVIEVGPCVVTQVKTVEKDGYQAYQLGFEEKKEKHTNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSG 122
              G F    VS ++ L EF+    D  L  G   +    F     VDV G++ GKGF G
Sbjct: 63  AEAGHFKKAGVSARRNLVEFK--SFDKELKAGDTVTADAVFEENDFVDVVGISKGKGFQG 120

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH FGG  + THG     R+ GS G    P +V K  +MAGR GG+RVT++NL+VV 
Sbjct: 121 VVKRHGFGGVGQQTHGQHNRGRAPGSMGASSYPSKVVKGMRMAGRTGGDRVTIQNLQVVK 180

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           +  +  +++VKG +PGA K S +L+
Sbjct: 181 IIPEHNIVMVKGSIPGA-KGSIVLI 204


>gi|254495341|ref|ZP_05108265.1| 50S ribosomal protein L3 [Polaribacter sp. MED152]
 gi|213690665|gb|EAQ40852.2| 50S ribosomal protein L3 [Polaribacter sp. MED152]
          Length = 195

 Score =  229 bits (584), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 80/197 (40%), Positives = 120/197 (60%), Gaps = 4/197 (2%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT +++  G+ IP TV+    C V   RT + +GY A+Q+G  + K K+ +K + G F  
Sbjct: 1   MTSLFDENGKNIPCTVIEAGPCVVTQVRTEEVDGYNALQLGFDDKKAKSSNKALDGHFKK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
              + KKK+ EF+  +  +   +G   +  +FT G+ VDV+G + GKGF G +KRH FGG
Sbjct: 61  AGTTAKKKVVEFQGFE--EEYKLGDAITVEHFTEGEFVDVSGTSKGKGFQGVVKRHGFGG 118

Query: 132 -LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
             +ATHG     R+ GS G    P RVFK  +MAGRMGG +V V+NL V+ V  ++ L++
Sbjct: 119 VGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGEKVKVQNLRVLKVVAEKNLLV 178

Query: 191 VKGCVPGAKKNSWILVR 207
           VKG VPG  KN+++ ++
Sbjct: 179 VKGAVPG-HKNAFVTIQ 194


>gi|218282171|ref|ZP_03488470.1| hypothetical protein EUBIFOR_01052 [Eubacterium biforme DSM 3989]
 gi|218216850|gb|EEC90388.1| hypothetical protein EUBIFOR_01052 [Eubacterium biforme DSM 3989]
          Length = 235

 Score =  229 bits (584), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 83/224 (37%), Positives = 123/224 (54%), Gaps = 7/224 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RKLGMT V+  +G  IPVTV+ +    V+  +T++ +GY AVQ+G  E K K 
Sbjct: 5   MMKGLLGRKLGMTQVFTEDGVLIPVTVVEVTPNVVLQKKTVETDGYNAVQLGFEEIKEKR 64

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +K   G     N SPK+ + E  V+  D  + VG + +   F  G+ VDV G + GKG+
Sbjct: 65  TTKANIGHCKKANTSPKRFIKE--VRDCDMDVNVGDLVNVDIFAAGETVDVIGTSKGKGY 122

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGST---GCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           +G + R+N      THG S + R  GS    G     GR+ K   MAG+ GG   T +NL
Sbjct: 123 NGTIVRNNAHQGPKTHGGSKNIRHIGSLATNGITSRQGRIMKGTIMAGQEGGYTTTNQNL 182

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
            V+ VD +   +L+KG VPG +K   ++VR + K++   K  V+
Sbjct: 183 TVIKVDTENNYMLIKGNVPGPRKGC-VMVRTA-KTSKGDKEPVT 224


>gi|262199869|ref|YP_003271078.1| 50S ribosomal protein L3 [Haliangium ochraceum DSM 14365]
 gi|262083216|gb|ACY19185.1| 50S ribosomal protein L3 [Haliangium ochraceum DSM 14365]
          Length = 243

 Score =  229 bits (584), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 91/216 (42%), Positives = 129/216 (59%), Gaps = 4/216 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MR G++ +KLGMT V+  +G RIPVTV+      VV  RT +++GY A+ VG GE   + 
Sbjct: 3   MRMGILGKKLGMTQVFAEDGERIPVTVIQTGPNYVVGKRTEERDGYSALVVGFGEKPARL 62

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSP-SYFTVGQLVDVTGMTIGK 118
            +KP+ G F    V P +   EFR+  D+     VG        F  G  +DVTG + GK
Sbjct: 63  ANKPLAGQF-KNGVKPPRMQREFRLPADEVAKYEVGQELKISEVFEAGIPLDVTGTSKGK 121

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           G+ G MKRHN  G +A+HGV    R  GS GCR  PGRV K K+M+GRMGG R TV+NL+
Sbjct: 122 GYQGVMKRHNMSGTKASHGVHEYFRHGGSIGCRLTPGRVHKGKRMSGRMGGERKTVQNLQ 181

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           +V + ++   +LV+G +PG  +  ++++R +   AV
Sbjct: 182 LVQILEEDNAVLVRGAIPGPNQG-YVMLRKAATRAV 216


>gi|325088644|gb|EGC41954.1| 50S ribosomal protein [Ajellomyces capsulatus H88]
          Length = 301

 Score =  229 bits (584), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 91/215 (42%), Positives = 139/215 (64%), Gaps = 3/215 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GMT +++   G+RIP T+L LD  QV+ H+TL KNGY AVQ+G G    +
Sbjct: 71  LRTGTLAIKKGMTAIFDLETGKRIPCTILQLDRVQVISHKTLKKNGYYAVQIGCGWKHER 130

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            V++PM G F++  V+PK+ + EFRV+ ++ LLP+G + + ++F  GQ VD    + G G
Sbjct: 131 AVTRPMLGHFAANGVAPKRHIHEFRVKDENGLLPIGEMINANWFQEGQYVDARSNSRGMG 190

Query: 120 FSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKRH F G   +HGVS++HR    S   +    RV+  KKMAG MG  +VT++NL+
Sbjct: 191 FAGVMKRHGFHGQDRSHGVSLTHRSMGSSGPGQGGGSRVYPGKKMAGNMGNKQVTLQNLK 250

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           V+ VD ++G+++V G V G  K   + ++D+ K  
Sbjct: 251 VLKVDAEKGIVVVNGNVSGP-KGCIVKLQDALKKP 284


>gi|83816242|ref|YP_445167.1| 50S ribosomal protein L3 [Salinibacter ruber DSM 13855]
 gi|109893553|sp|Q2S3R4|RL3_SALRD RecName: Full=50S ribosomal protein L3
 gi|83757636|gb|ABC45749.1| ribosomal protein L3 [Salinibacter ruber DSM 13855]
          Length = 208

 Score =  229 bits (584), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 81/201 (40%), Positives = 111/201 (55%), Gaps = 4/201 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M SG++ +K+GMT V++ EG  +  TV+      V   ++  ++GY AVQ+G    K KN
Sbjct: 1   MSSGLIGKKVGMTSVFDDEGNNVACTVVEAGPNVVTQVKSEGRDGYSAVQLGFDNVKEKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119
           V++ M G F      PK+ L EFR   DD  + +G V      F   + +DV G++ GKG
Sbjct: 61  VTQAMLGHFEKAGCPPKRMLSEFRDFGDD--VDLGDVVRVQDLFQEDERIDVVGVSKGKG 118

Query: 120 FSGAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           F G +KRH F G    THG S   R  GS G   DP RVFK  +MAG+ GG R  ++NL 
Sbjct: 119 FQGVVKRHGFSGVGMMTHGQSDRQRHPGSIGASADPSRVFKGVRMAGQTGGERTKIQNLR 178

Query: 179 VVSVDDKRGLILVKGCVPGAK 199
           VV +   +  IL+ G VPG K
Sbjct: 179 VVRILADQNAILIHGSVPGPK 199


>gi|149729728|ref|XP_001497211.1| PREDICTED: similar to Mitochondrial ribosomal protein L3 [Equus
           caballus]
          Length = 348

 Score =  228 bits (583), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 76/216 (35%), Positives = 113/216 (52%), Gaps = 5/216 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGY-MAVQVGAGEAKVK 59
           R G++A KLGM  ++  +G++   T+L + +C V+ +   +  NG   A+ VG       
Sbjct: 96  RVGLIALKLGMMPLWTKDGQKHVATLLQVQDCHVLKYTPKENHNGKRAALTVGGKTVSRF 155

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             S  +  F+  + + PK+K+  F V  D+ ++  G+    ++F  GQ VDVT  TIGKG
Sbjct: 156 RKSTSILEFYQELGLPPKQKVKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 214

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR  F G  ATHG + +HR  G+     D  RV+   KM G+MG    T   L+V
Sbjct: 215 FQGVMKRWGFKGQPATHGQTKTHRRPGAI-STGDVARVWPGTKMPGQMGNIDRTAYGLKV 273

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             ++ K  +I V G VPG  KN  + +RDS   A  
Sbjct: 274 WRINTKHNIIYVNGSVPG-HKNCLVKIRDSKLPAYK 308


>gi|256420659|ref|YP_003121312.1| ribosomal protein L3 [Chitinophaga pinensis DSM 2588]
 gi|256035567|gb|ACU59111.1| ribosomal protein L3 [Chitinophaga pinensis DSM 2588]
          Length = 205

 Score =  228 bits (583), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 78/206 (37%), Positives = 115/206 (55%), Gaps = 4/206 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GMT +++  GR+  VT++    C V   +T++ +GY A+QV  GE K KN  
Sbjct: 2   KGIIGKKIGMTSIFDQNGRQTAVTIIEAGPCVVTQVKTVETDGYNAIQVSFGEKKEKNTP 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K     F+  + SPK+ + EFR    D    +G   +   F  G+ +DV G + GKGF G
Sbjct: 62  KAELNHFAKASTSPKRFVKEFR--NPDVQKALGETITTEIFAEGETIDVVGTSKGKGFQG 119

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH F G   ATHG     R+ GS G    P RVFK  +MAG+ G  +V VK L++V 
Sbjct: 120 VVKRHGFSGVGEATHGQHDRSRAPGSVGGSSYPSRVFKGMRMAGQTGNEQVKVKGLKIVK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           +  ++  ILV G VPG    S +L++
Sbjct: 180 IFAEKNYILVSGSVPG-HNGSIVLIQ 204


>gi|291334061|gb|ADD93734.1| 50S ribosomal protein L3 [uncultured marine bacterium
           MedDCM-OCT-S05-C114]
          Length = 215

 Score =  228 bits (583), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 84/217 (38%), Positives = 126/217 (58%), Gaps = 5/217 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA--GEAKV 58
           M   ++ +KLGM+ VY+ +   +PVT++    C ++  ++LDK+GY A+Q+G        
Sbjct: 1   MNLELIGKKLGMSQVYDEDNNLVPVTIVEAGPCPILQVKSLDKDGYEAIQIGFNPKGKAP 60

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
              +K   G  S  NV P+    E R++ +      GS  +   F+  ++VDV   T GK
Sbjct: 61  NKPNKCQIGKASKANVEPQHLSQEIRIKGEHSF-EQGSSLTVENFSDVKVVDVISTTKGK 119

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G +KR NFGG  A+HG S+ HR  GS G  Q PGRVFKNKKM G  G  + T +NL+
Sbjct: 120 GFQGVVKRWNFGGGPASHG-SMFHRRGGSYGLCQWPGRVFKNKKMPGHTGTAKRTTQNLQ 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           +V +  ++ L+L+KG VPG+ K + + VR + KS V+
Sbjct: 179 LVKILPEKNLLLIKGSVPGS-KGTILTVRVAKKSKVS 214


>gi|223936428|ref|ZP_03628340.1| ribosomal protein L3 [bacterium Ellin514]
 gi|223894946|gb|EEF61395.1| ribosomal protein L3 [bacterium Ellin514]
          Length = 224

 Score =  228 bits (583), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 84/217 (38%), Positives = 123/217 (56%), Gaps = 6/217 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLG T VY+ +G   PVTV+     +V+  +T D +GY AVQ+G  + K + V+K
Sbjct: 3   GLLGKKLGQTRVYDDKGVLWPVTVVLAGPNRVLQCKTQDSDGYNAVQLGFDDQKDQRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G     N +  K++ EFR       +  G V   + F  G  +D  G+T G+GF G 
Sbjct: 63  PLLGHIKKHNGAAVKRIREFRDFTLS--VKPGDVIGATIFAKGDFIDAIGVTKGRGFEGV 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF G   THG    HR  G+ G R  PG V +  +M G MG  + T +NLE++ V 
Sbjct: 121 MKRHNFAGGDMTHGAKGWHRRAGAIGQRLFPGTVMRGMRMPGHMGQVQRTTQNLEIIQVR 180

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
           +   L+L+KG +PGA K  ++++R+S K   N KG V
Sbjct: 181 EADNLLLIKGAIPGA-KGDYVVIRESKK---NPKGSV 213


>gi|210623188|ref|ZP_03293627.1| hypothetical protein CLOHIR_01577 [Clostridium hiranonis DSM 13275]
 gi|210153725|gb|EEA84731.1| hypothetical protein CLOHIR_01577 [Clostridium hiranonis DSM 13275]
          Length = 209

 Score =  228 bits (583), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 91/211 (43%), Positives = 134/211 (63%), Gaps = 4/211 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GMT ++  EG  IPVTV+ +    V   +T++ +GY A+QVG  +AK K+++
Sbjct: 2   KGILGKKVGMTQIFTEEGVVIPVTVVEVGPVVVTQVKTIENDGYNAIQVGFEDAKEKSLN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP +G  ++ NV  KK L EFRV+   +   VG       F  G  +DVTG++ GKGF G
Sbjct: 62  KPAKGHLAAANV-LKKHLKEFRVENAAE-YTVGQEIKADIFEAGAKIDVTGISKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRH       THG S  HR  GS G    PGRVFKNKK+AG MG  +VT++NL++V V
Sbjct: 120 PIKRHGQSRGPETHG-SRYHRRPGSMGACSYPGRVFKNKKLAGHMGSVKVTIQNLDLVRV 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D ++ L+LVKG +PGA K S + ++++ K++
Sbjct: 179 DAEKNLMLVKGAIPGA-KGSVVTIKEAVKAS 208


>gi|145606142|ref|XP_365809.2| hypothetical protein MGG_02511 [Magnaporthe oryzae 70-15]
 gi|145013870|gb|EDJ98511.1| hypothetical protein MGG_02511 [Magnaporthe oryzae 70-15]
          Length = 396

 Score =  228 bits (583), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 97/218 (44%), Positives = 132/218 (60%), Gaps = 2/218 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+GVVA K GMT +++  G RIP TVL LD+ QV++++T +  GY AVQVGA   +   
Sbjct: 105 VRAGVVAIKKGMTALFSRRGTRIPCTVLQLDSVQVLLNKTRENAGYFAVQVGAVPKRPST 164

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
              P  G+F +  V PK+ + EFRV+ +  LLPVG    P +F VGQ VDV G + G GF
Sbjct: 165 ALAPQLGYFEAKGVEPKQHVAEFRVRNEQGLLPVGVQLQPDWFHVGQWVDVRGTSRGMGF 224

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179
            G MKRH F G   +HG S++HR+ GS G  Q  G RV   KKM GRMGG   T +NL V
Sbjct: 225 EGGMKRHGFSGQNKSHGNSLNHRTGGSVGPSQGSGSRVHPGKKMPGRMGGQSATAQNLSV 284

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           + VD+  G+++VKG V G  K   + ++D+       +
Sbjct: 285 LKVDNDLGIVVVKGAVAGP-KGGMVKIQDAVLKPPPPE 321


>gi|126022788|ref|NP_043617.2| ribosomal protein L3 [Odontella sinensis]
 gi|125987859|sp|P49569|RK3_ODOSI RecName: Full=50S ribosomal protein L3, chloroplastic
          Length = 207

 Score =  228 bits (583), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 117/206 (56%), Gaps = 3/206 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT +++  G  IPVT+L +  C +   +T   +GY A+Q+G G    K+
Sbjct: 1   MSLGLLGNKIGMTQIFDESGNIIPVTILKVGPCVITQVKTDLNDGYNAIQIGYGTVSNKS 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P  G     N+ P K L EFRV   ++   VG V +    + GQ +DVTG + GKGF
Sbjct: 61  LTQPELGHLQKSNIQPLKYLKEFRVNNPEE-FKVGQVVNVESLSTGQFIDVTGKSSGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG  KRHNF     THG S +HR+ GS G    PGRV   KKMAG++G      K L+++
Sbjct: 120 SGLQKRHNFTRGPMTHG-SKNHRAPGSIGMGTTPGRVLPGKKMAGQLGNKVTKTKKLKII 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
            V+    +++VKG VPG   N  + +
Sbjct: 179 QVNGNENILVVKGSVPGKPGN-LVTI 203


>gi|116515259|ref|YP_802888.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|122285345|sp|Q057A4|RL3_BUCCC RecName: Full=50S ribosomal protein L3
 gi|58384692|gb|AAW72707.1| 50S ribosomal protein L3 [Buchnera aphidicola (Cinara cedri)]
 gi|116257113|gb|ABJ90795.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 208

 Score =  228 bits (583), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 85/209 (40%), Positives = 127/209 (60%), Gaps = 2/209 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V +KLGMT ++  E   IPVT + + +  VV  +T++ + Y ++Q+  G  K K V 
Sbjct: 2   IGLVGKKLGMTRIFFEEYTSIPVTAIEILDNIVVQVKTIENDNYESIQLTTGFKKEKKVL 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F   NVS  + L+EF+  K+      G   + ++F   + +D+TG++ GKGF+G
Sbjct: 62  KSEYGHFLKFNVSVGRGLWEFKC-KNSSNYSSGQKITINFFKNIKKLDITGISKGKGFAG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    ATHG S+SHR  GS G  Q PG VFK KKM+G +G  R T++NL++V +
Sbjct: 121 TVKRWNFRMQDATHGNSLSHRVPGSIGQNQTPGHVFKGKKMSGHLGDQRTTIQNLKIVKI 180

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           DD   +IL+KG +PG+   S IL++ S K
Sbjct: 181 DDINKIILIKGSIPGSI-GSDILLKPSIK 208


>gi|284042804|ref|YP_003393144.1| 50S ribosomal protein L3 [Conexibacter woesei DSM 14684]
 gi|283947025|gb|ADB49769.1| 50S ribosomal protein L3 [Conexibacter woesei DSM 14684]
          Length = 205

 Score =  228 bits (583), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 79/205 (38%), Positives = 108/205 (52%), Gaps = 3/205 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++A+KLGMT  +  +GR   VTVL    C V   RT +++GY AVQ+  G  + K ++K 
Sbjct: 4   ILAKKLGMTQRFLEDGRVERVTVLEAGPCPVTAIRTHERDGYEAVQLAFGACREKKLTKA 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
             G     + S  + L EFR   +   L VG   +   F  GQ V V G + GKGF G +
Sbjct: 64  ELGHLKKADASAHRHLVEFR--DEAGELQVGETVTVEAFEAGQTVKVAGTSKGKGFQGTI 121

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRHNF     +HG     R+ GS G    P RV K  +  G+MG  RVT K LE+V +  
Sbjct: 122 KRHNFRRGPKSHGSHNV-RAPGSIGASAWPARVMKGIRGPGQMGNKRVTQKGLEIVEIVS 180

Query: 185 KRGLILVKGCVPGAKKNSWILVRDS 209
           K  L+LV+G VPG K  +  +  D+
Sbjct: 181 KDNLMLVRGSVPGPKGGTVEVRTDA 205


>gi|323456985|gb|EGB12851.1| hypothetical protein AURANDRAFT_19295 [Aureococcus anophagefferens]
          Length = 249

 Score =  228 bits (583), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 105/223 (47%), Positives = 135/223 (60%), Gaps = 10/223 (4%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G +A K+GM   ++  G+R  +TVLH+D C+VV  +    +GY A+Q+GAG  K K+ 
Sbjct: 2   RTGALAVKVGMLGTWDASGQRHALTVLHVDGCRVVQVKDAATDGYTALQLGAGALKPKHA 61

Query: 62  SKPMRGFFSSVNVSP--------KKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113
                G   +              + L EFRV  D  +LP G+    ++F  GQLVDV G
Sbjct: 62  PSAHAGHCGAHGGEAVAGTPYELARTLAEFRVSAD-AVLPPGTRVPAAHFAPGQLVDVRG 120

Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
            T GKGF GAMKR NFGG RATHGVS +HR+HGS G  Q+PGRVFK KKMAGRMGG   T
Sbjct: 121 ATRGKGFQGAMKRWNFGGQRATHGVSKTHRAHGSMGGCQNPGRVFKGKKMAGRMGGRNRT 180

Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            +NL V  +D  R L+ V+GCVPGA K +W+ V D+ K     
Sbjct: 181 AQNLTVHKIDTVRDLLFVRGCVPGA-KGTWVRVTDAVKKVTPA 222


>gi|149072009|ref|YP_001293580.1| 50S ribosomal protein L3 [Rhodomonas salina]
 gi|212288242|sp|A6MW01|RK3_RHDSA RecName: Full=50S ribosomal protein L3, chloroplastic
 gi|134302960|gb|ABO70764.1| 50S ribosomal protein L3 [Rhodomonas salina]
          Length = 208

 Score =  228 bits (582), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 83/203 (40%), Positives = 119/203 (58%), Gaps = 2/203 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGMT +++  G  IPVTV+    C +   +T + + Y A+Q+G  E K  +
Sbjct: 1   MIPGILGTKLGMTQIFDESGLAIPVTVIKAGPCILTQIKTQESDSYQAIQIGFSEVKESS 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP+ G          K L E+RV K  + L V    +   F VG+ V V+G TIGKGF
Sbjct: 61  LNKPLLGHLKKSQAPALKHLKEYRV-KSVEGLEVAQKITLDSFEVGKTVSVSGKTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G ++R++F     THG S +HR  GS G    PG+V K KKMAGR+GG + T+KNLE+V
Sbjct: 120 AGTVRRYSFTRGPMTHG-SKNHREPGSIGQGSTPGKVHKGKKMAGRLGGKQSTIKNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSW 203
            V+    +++VKG VPG K N  
Sbjct: 179 HVNTDNNILVVKGAVPGKKGNIL 201


>gi|188996239|ref|YP_001930490.1| ribosomal protein L3 [Sulfurihydrogenibium sp. YO3AOP1]
 gi|226730578|sp|B2V7L3|RL3_SULSY RecName: Full=50S ribosomal protein L3
 gi|188931306|gb|ACD65936.1| ribosomal protein L3 [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 226

 Score =  228 bits (582), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 89/210 (42%), Positives = 127/210 (60%), Gaps = 3/210 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+ + G+ IPVTV+    C V   RT +K+GY AV +  GE K KN
Sbjct: 1   MPKGIIGKKIGMTKVF-VNGKAIPVTVIQAGPCYVAYTRTQEKDGYNAVALTFGERKEKN 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           + KP+   F   N+ P K + EF ++  + + P   +   + F  G LVD+TG + G+GF
Sbjct: 60  IPKPLLAIFKKANIKPAKVIKEFPLKDGETVEPGQEIRIENVFEKGDLVDITGKSKGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +  MKR +F G   +HG    HR+ GS GCR +PGRV+K K+MAG  G   VTV  LEVV
Sbjct: 120 TSVMKRWDFAGFPKSHG-HRYHRAVGSIGCRTEPGRVWKTKRMAGHYGNETVTVLGLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
            +  ++ +ILVKG VPGA  NS + ++ S 
Sbjct: 179 DIIPEKNVILVKGSVPGAP-NSTVFLKQSV 207


>gi|325000492|ref|ZP_08121604.1| ribosomal protein L3 [Pseudonocardia sp. P1]
          Length = 225

 Score =  228 bits (582), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 92/210 (43%), Positives = 123/210 (58%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           +GV+  KLGMT V++   R +PVTV+ +    V   R+ + +GY AVQ+  G    + V+
Sbjct: 15  TGVLGTKLGMTQVFDDNNRVVPVTVVQVGPNVVTQVRSEESDGYTAVQLAYGAIDPRKVN 74

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V+P++ L E R     D  P G   +   F     VDV G+T GKGF+G
Sbjct: 75  KPETGHFAKAGVTPRRHLLELRTADAADYTP-GQEITAEAFAEIAEVDVVGVTKGKGFAG 133

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F GL A+HG    HRS GS G    PGRVFK  +MAGRMG  R T +NL+V  V
Sbjct: 134 VMKRHGFAGLGASHGTQRKHRSPGSIGGCATPGRVFKGVRMAGRMGSERQTTQNLKVHRV 193

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +RGL+L+KG VPGA +   ++V+   K 
Sbjct: 194 DAERGLLLIKGAVPGA-RGGLVVVKTPAKG 222


>gi|288929340|ref|ZP_06423185.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329442|gb|EFC68028.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 317 str. F0108]
          Length = 204

 Score =  228 bits (582), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 81/205 (39%), Positives = 118/205 (57%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V++ +G+ +P TV+    C V   +T++ +GY AVQ+  GEAK    +K
Sbjct: 3   GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVETDGYKAVQLAYGEAKKNRTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
            M G F     +PKK L EF+   +     +G   +   F   + VDV G + GKGF G 
Sbjct: 63  AMAGIFEKAGTTPKKHLAEFKFDTE---YNLGDTITVDLFEGAEFVDVVGTSKGKGFQGV 119

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  + THG     R  GS G    P +VFK  +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQTTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLKVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  LILVKG V G   ++ ++ +
Sbjct: 180 IPEHNLILVKGSVAGCNGSTLLIKK 204


>gi|209528437|ref|ZP_03276868.1| ribosomal protein L3 [Arthrospira maxima CS-328]
 gi|209491125|gb|EDZ91549.1| ribosomal protein L3 [Arthrospira maxima CS-328]
          Length = 229

 Score =  228 bits (582), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 79/226 (34%), Positives = 122/226 (53%), Gaps = 20/226 (8%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT V++   G+ IPVTV+    C +   +T   +GY A+Q+G GE   K
Sbjct: 1   MSVGILGTKLGMTQVFDAETGKAIPVTVVQAGPCTITQVKTEATDGYTAIQLGYGEVPNK 60

Query: 60  ----------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
                            +S   +G  +  N    + L E+R++  D+   +G       F
Sbjct: 61  TRKLNTRKSPDKEVNKYLSHAEQGHLTKSNSPLVRHLKEYRLESTDNF-ELGQEIKVDTF 119

Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
            +GQ+VDVTG+++G+GF+G  KR+NF      HG S +HR  GS G    PGRV+  KKM
Sbjct: 120 ELGQMVDVTGISMGRGFAGNQKRNNFRRGPMAHG-SKNHRLPGSIGPGTTPGRVYPGKKM 178

Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           AGR GG ++T + L +V +D +R L+L+KG +PG      + ++ +
Sbjct: 179 AGRYGGKQITTRKLTIVRIDLERNLLLIKGSIPGKP-GGLLNIKPA 223


>gi|239905858|ref|YP_002952597.1| 50S ribosomal protein L3 [Desulfovibrio magneticus RS-1]
 gi|259647413|sp|C4XLX3|RL3_DESMR RecName: Full=50S ribosomal protein L3
 gi|239795722|dbj|BAH74711.1| 50S ribosomal protein L3 [Desulfovibrio magneticus RS-1]
          Length = 210

 Score =  228 bits (581), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 88/204 (43%), Positives = 119/204 (58%), Gaps = 2/204 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RKLGMT V+  +G  IPVTV+    C V   + L+K+GY A+Q+G  E   + V+K
Sbjct: 6   GILGRKLGMTRVFGDDGSIIPVTVIQAGPCPVTQVKNLEKDGYNAMQIGFDEIPERKVNK 65

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P +G          + L E R+         G   +   F  G++V VTG +IGKGF+G 
Sbjct: 66  PEKGHLDKAARGYFRVLKEIRLDGPV-PFEQGMDVTVDIFAPGEIVKVTGTSIGKGFAGV 124

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR NF GL+ THG   +HRS GS G   +PG+V K KKMAG MG   VTV ++ VV V 
Sbjct: 125 MKRWNFAGLKKTHGTEKAHRSGGSIGNNTEPGKVMKGKKMAGHMGARTVTVPSITVVDVR 184

Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207
            +  LILVKG +PG  +N  ++VR
Sbjct: 185 PEMNLILVKGQIPGP-RNGVVVVR 207


>gi|254431244|ref|ZP_05044947.1| ribosomal protein L3 [Cyanobium sp. PCC 7001]
 gi|197625697|gb|EDY38256.1| ribosomal protein L3 [Cyanobium sp. PCC 7001]
          Length = 204

 Score =  228 bits (581), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 78/205 (38%), Positives = 118/205 (57%), Gaps = 3/205 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           M+  ++  G+ IPVTV+    C++   ++   +GY AVQ+G G+ + K V+KP +G  + 
Sbjct: 1   MSQFFDEAGKSIPVTVIEAGPCRITQIKSTGTDGYNAVQLGFGDIREKLVNKPAQGHLAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
                 + L E+RV   D  L +G   + + F  GQ VDV+G T+G+GF+G  KRH F  
Sbjct: 61  SGEELLRHLKEYRVDSLDG-LELGGAVTVAAFEPGQKVDVSGDTMGRGFAGYQKRHGFSR 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
              THG S +HR  GSTG    PGRV+  K+MAGR GG + T + L ++ VD +R L++V
Sbjct: 120 GPMTHG-SKNHREPGSTGAGTTPGRVYPGKRMAGRYGGKQTTTRGLVILKVDTERNLLVV 178

Query: 192 KGCVPGAKKNSWILVRDSFKSAVNC 216
           KG VPG    + + +R + +   N 
Sbjct: 179 KGSVPGKP-GALLNIRPANRVGANA 202


>gi|282881000|ref|ZP_06289691.1| 50S ribosomal protein L3 [Prevotella timonensis CRIS 5C-B1]
 gi|281305223|gb|EFA97292.1| 50S ribosomal protein L3 [Prevotella timonensis CRIS 5C-B1]
          Length = 204

 Score =  228 bits (581), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 83/205 (40%), Positives = 125/205 (60%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V++ +G+ IP TV+    C V   +T++K+GY AVQ+G GEAK K  SK
Sbjct: 3   GLIGRKIGMTSVFSADGKNIPCTVIEAGPCVVTQLKTVEKDGYKAVQLGFGEAKEKRTSK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F     +PKK L EF+ +++     +G   +   F+    VDV G++ GKGF G 
Sbjct: 63  PLMGTFKKAGTTPKKHLAEFKFEEE---YNLGDTITVDLFSNADFVDVVGVSKGKGFQGV 119

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  ++THG     R  GS G    P +VFK  +M G+MGG+RVT +NL V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLRVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             ++ L++VKG   G   ++ ++ +
Sbjct: 180 IPEQNLLIVKGSFAGFNGSTVLIEK 204


>gi|168282378|ref|ZP_02690045.1| ribosomal protein L3 [Ureaplasma parvum serovar 14 str. ATCC 33697]
 gi|182675690|gb|EDT87595.1| ribosomal protein L3 [Ureaplasma parvum serovar 14 str. ATCC 33697]
          Length = 233

 Score =  227 bits (580), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 78/210 (37%), Positives = 115/210 (54%), Gaps = 8/210 (3%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++  K+GMT V+   G+ +  TV++++  +V+  +T +K+GY A+Q+G    K K ++KP
Sbjct: 4   LLGTKVGMTQVFTETGKAVAATVIYVEPNKVLAVKTNEKDGYSAIQIGYETVKEKALNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + G F   N  PK+ + EFR    D +  VG+  + S F  GQLV+    T G GF+G++
Sbjct: 64  LLGQFKKANSDPKRHIKEFR----DAVAEVGAELTVSEFEPGQLVNAQAYTKGHGFTGSI 119

Query: 125 KRHNFGGLRATHGVSISHRSHGSTG---CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           KRHNF      HG    HR  GS           RVFK  K+ G  G   VT KNL V+ 
Sbjct: 120 KRHNFSMGPMGHGAGYPHRYVGSIAKGRGGSQAQRVFKGTKLPGHYGHELVTTKNLLVLD 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V     LIL+KG +PG  K S +L++ + K
Sbjct: 180 VKANENLILIKGAIPGP-KGSIVLLKSAKK 208


>gi|291567784|dbj|BAI90056.1| 50S ribosomal protein L3 [Arthrospira platensis NIES-39]
          Length = 229

 Score =  227 bits (580), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 81/226 (35%), Positives = 122/226 (53%), Gaps = 20/226 (8%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT V++   G+ IPVTV+    C +   +T   +GY A+Q+G GE   K
Sbjct: 1   MSVGILGTKLGMTQVFDTETGKAIPVTVVQAGPCTITQVKTEATDGYTAIQLGYGEVPNK 60

Query: 60  ----------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
                            +S   +G  +  N    + L E+R++  D+   +G       F
Sbjct: 61  TRKLNTRKSPDKEVNKYLSHAEQGHLTKSNSPLVRHLKEYRLESTDNF-ELGQEVKVDAF 119

Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
             GQ+VDVTG+++G+GF+G  KR+NF      HG S +HR  GS G    PGRV+  KKM
Sbjct: 120 EPGQIVDVTGISMGRGFAGNQKRNNFRRGPMAHG-SKNHRLPGSIGPGTTPGRVYPGKKM 178

Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           AGR GG ++T + L +V VD +R L+L+KG +PG K    + ++ +
Sbjct: 179 AGRYGGKQITTRKLTIVRVDLERNLLLIKGSIPG-KTGGLLNIKPA 223


>gi|168308532|ref|ZP_02691207.1| ribosomal protein L3 [Ureaplasma parvum serovar 1 str. ATCC 27813]
 gi|171902869|gb|EDT49158.1| ribosomal protein L3 [Ureaplasma parvum serovar 1 str. ATCC 27813]
          Length = 233

 Score =  227 bits (580), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 78/210 (37%), Positives = 114/210 (54%), Gaps = 8/210 (3%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++  K+GMT V+   G+ +  TV++++  +V+  +T +K+GY A+Q+G    K K ++KP
Sbjct: 4   LLGTKVGMTQVFTETGKAVAATVIYVEPNKVLAVKTNEKDGYSAIQIGYETVKEKALNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + G F   N  PK+ + EFR    D    VG+  + S F  GQLV+    T G GF+G++
Sbjct: 64  LLGQFKKANSDPKRHIKEFR----DVFAEVGAELTVSEFEPGQLVNAQAYTKGHGFTGSI 119

Query: 125 KRHNFGGLRATHGVSISHRSHGSTG---CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           KRHNF      HG    HR  GS           RVFK  K+ G  G   VT KNL V+ 
Sbjct: 120 KRHNFSMGPMGHGAGYPHRYVGSIAKGRGGSQAQRVFKGTKLPGHYGHELVTTKNLLVLD 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V     LIL+KG +PG  K S +L++ + K
Sbjct: 180 VKANENLILIKGAIPGP-KGSIVLLKSAKK 208


>gi|303328094|ref|ZP_07358533.1| 50S ribosomal protein L3 [Desulfovibrio sp. 3_1_syn3]
 gi|302861920|gb|EFL84855.1| 50S ribosomal protein L3 [Desulfovibrio sp. 3_1_syn3]
          Length = 209

 Score =  227 bits (579), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 83/206 (40%), Positives = 117/206 (56%), Gaps = 2/206 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           + G++ RKLGMT ++  +G  + VTV+    C V   +T++K+GY A+Q+   EAK K+V
Sbjct: 4   KMGILGRKLGMTRIFAGDGAAVAVTVIEAGPCPVTQVKTVEKDGYNALQIALTEAKEKHV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            K MRG F+       +   E R+    +  P G   +   F  G +V VTG ++GKG+ 
Sbjct: 64  GKAMRGHFAKAGTGLFRHTREIRLSGAPEQQP-GQQLTVDIFAAGDVVKVTGKSMGKGYQ 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G M+R NF G + THG    HR++GS G    PG VFK +KMAG  G   VT   L +V 
Sbjct: 123 GRMRRWNFAGSKDTHGCEKVHRNNGSVGNNTFPGHVFKGRKMAGHWGNETVTEMGLLIVG 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  +  +ILVKG VPG  KN  +L+R
Sbjct: 183 VRPEDNVILVKGSVPGP-KNGLVLIR 207


>gi|133117|sp|P18665|RM03_RAT RecName: Full=39S ribosomal protein L3, mitochondrial; Short=L3mt;
           Short=MRP-L3
          Length = 347

 Score =  227 bits (579), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 74/221 (33%), Positives = 113/221 (51%), Gaps = 8/221 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVKN 60
           R G++A KLGM  ++  +G++  VT+L + +C V+ +   +  NG  A  +  G      
Sbjct: 96  RVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKTAT-LTVGGKTGSR 154

Query: 61  VSKP--MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           + K   +  F+  + + PK+    F V  D+ ++  G+    ++F  GQ VDVT  TIGK
Sbjct: 155 LYKANSILEFYRDLGLPPKQTTKIFHVT-DNAVIKQGTPLYAAHFRPGQYVDVTAKTIGK 213

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G MKR  F G  A+HG + +HR  G+     D  RV+   KM G+MG    TV  L+
Sbjct: 214 GFQGVMKRWGFKGQPASHGQTKTHRRPGAI-STGDIARVWPGTKMPGKMGNQNRTVYGLK 272

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           V  V+ K  +I V G V    +N  + ++DS   A    GK
Sbjct: 273 VWRVNTKHNIIYVNGSV--GHRNCLVKIKDSTLPAYKDLGK 311


>gi|81859531|sp|Q5HDV8|RL3_STAAC RecName: Full=50S ribosomal protein L3
 gi|57285020|gb|AAW37114.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus COL]
 gi|323442744|gb|EGB00370.1| 50S ribosomal protein L3 [Staphylococcus aureus O46]
          Length = 209

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 89/210 (42%), Positives = 115/210 (54%), Gaps = 11/210 (5%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA--------GEAKVKNVSK 63
           MT V+   G  IPVTV+      V+  +T++ +GY A+QVG              K  +K
Sbjct: 1   MTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYKKDAKSNKYANK 60

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G     + +PK+ + EFR   D D   VG   S   F  G ++DVTG++ GKGF GA
Sbjct: 61  PAEGHAKKADAAPKRFIREFR-NVDVDAYEVGQEVSVDTFVAGDVIDVTGVSKGKGFQGA 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KRH       +HG    HR+ GS G   D  RVFK +KM GRMGGN VTV+NLEVV VD
Sbjct: 120 IKRHGQSRGPMSHGSH-FHRAPGSVGMASDASRVFKGQKMPGRMGGNTVTVQNLEVVQVD 178

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +  +ILVKG VPG KK   + +R S K  
Sbjct: 179 TENKVILVKGNVPGPKKG-LVEIRTSIKKG 207


>gi|294674771|ref|YP_003575387.1| 50S ribosomal protein L3 [Prevotella ruminicola 23]
 gi|294472870|gb|ADE82259.1| ribosomal protein L3 [Prevotella ruminicola 23]
          Length = 204

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 83/205 (40%), Positives = 121/205 (59%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V++ +G+ +P TV+    C V   ++++K+GY AVQ+  GE K KN +K
Sbjct: 3   GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKSVEKDGYEAVQLAFGEKKEKNTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
            M G F   N +PK  L EF+   +   L +G   +   F   + VDV G + GKGF G 
Sbjct: 63  AMMGIFKKANTTPKAHLAEFKFDTE---LNLGDTVTVDIFEGAEFVDVVGTSKGKGFQGV 119

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  +ATHG     R  GS G    P +VFK  +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQATHGQDDRLRKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLKVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  LILVKG   G   ++ ++ +
Sbjct: 180 IPEHNLILVKGSCAGYNGSTVLINK 204


>gi|254442313|ref|ZP_05055789.1| ribosomal protein L3 [Verrucomicrobiae bacterium DG1235]
 gi|198256621|gb|EDY80929.1| ribosomal protein L3 [Verrucomicrobiae bacterium DG1235]
          Length = 201

 Score =  226 bits (578), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 84/201 (41%), Positives = 116/201 (57%), Gaps = 2/201 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT VY  + + +PVTVL    C V+  +T++ +GY A+Q+G    K KN SK   G    
Sbjct: 1   MTQVYGSDNQVVPVTVLQAGPCPVLQVKTVESDGYNAIQIGFDSKKDKNASKAAIGHAKK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             V+   ++       +      G V   S F VG+ VDV G T GKGF+G MKR N  G
Sbjct: 61  AGVAHAPRVIREVRSPEAIDATAGDVLDVSKFEVGKKVDVIGNTKGKGFAGVMKRFNTKG 120

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
             A+HG S+ HR  GS G  Q PG VFKN+KM G MG  + T++NLE+VS+D ++ LILV
Sbjct: 121 GPASHG-SMFHRRIGSIGLCQWPGHVFKNQKMPGHMGAKQRTIQNLEIVSIDAEKNLILV 179

Query: 192 KGCVPGAKKNSWILVRDSFKS 212
           KG +PGA     +++R + K+
Sbjct: 180 KGGIPGAN-GDTVMIRSAIKA 199


>gi|281422251|ref|ZP_06253250.1| 50S ribosomal protein L3 [Prevotella copri DSM 18205]
 gi|281403756|gb|EFB34436.1| 50S ribosomal protein L3 [Prevotella copri DSM 18205]
          Length = 204

 Score =  226 bits (578), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 82/204 (40%), Positives = 123/204 (60%), Gaps = 5/204 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +G+ IP TV+ +  C V   +T++K+GY A Q+G  EAK K  S+
Sbjct: 3   GLIGKKIGMTSVFSADGKNIPCTVIEVGPCVVTQVKTVEKDGYKAYQLGFEEAKEKRTSQ 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           PM G F     +PKK L EF+  ++     +G   +   F   + VDV G + GKGF G 
Sbjct: 63  PMMGIFKKAGTTPKKHLAEFKFDEE---YNLGDTITVEIFNDCKFVDVIGTSKGKGFQGV 119

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  ++THG     R  GS G    P +VFK  +M G+MGG+RVT +NL+V+ +
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKI 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
             ++ L++VKG   G  K S +L+
Sbjct: 180 IPEQNLLIVKGSFAGC-KGSTVLI 202


>gi|88704378|ref|ZP_01102092.1| Ribosomal protein L3 [Congregibacter litoralis KT71]
 gi|88701429|gb|EAQ98534.1| Ribosomal protein L3 [Congregibacter litoralis KT71]
          Length = 184

 Score =  226 bits (578), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 81/184 (44%), Positives = 109/184 (59%), Gaps = 1/184 (0%)

Query: 29  HLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKD 88
            +   +V   +  D +GY ++QV AG  K   VSK   G F+   V   + L+EFR+  +
Sbjct: 2   EVSPNRVTQIKENDSDGYRSIQVTAGSRKAAKVSKSEAGLFAKAGVEAGRGLWEFRLSAE 61

Query: 89  DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148
           ++   VG+  +   F  GQ VDV G + GKGF G +KR NF    ATHG S+SHR+ GS 
Sbjct: 62  EEGFEVGAELTVERFEEGQKVDVAGKSKGKGFQGVIKRWNFSMQDATHGNSLSHRAPGSI 121

Query: 149 GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRD 208
           G  Q PGRVFK KKM+G+MG   VTV+ LE+V VD +R L+L+KG VPGA     + VR 
Sbjct: 122 GQCQTPGRVFKGKKMSGQMGNTNVTVQGLEIVRVDAERNLLLIKGAVPGAPGGDVV-VRP 180

Query: 209 SFKS 212
           + K 
Sbjct: 181 AVKG 184


>gi|282878759|ref|ZP_06287527.1| 50S ribosomal protein L3 [Prevotella buccalis ATCC 35310]
 gi|281299150|gb|EFA91551.1| 50S ribosomal protein L3 [Prevotella buccalis ATCC 35310]
          Length = 204

 Score =  226 bits (578), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 79/205 (38%), Positives = 119/205 (58%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V++ +G+ IP TV+    C V   +T + +GY A+Q+G GEAK K  +K
Sbjct: 3   GLIGRKIGMTSVFSADGKNIPCTVIEAGPCVVTQVKTEETDGYKALQLGFGEAKEKRTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F     +PKK L EF+   +     +G   +   F   + VDV G + GKGF G 
Sbjct: 63  PLLGTFKKAGTTPKKHLVEFKFDGE---YNLGDTITVELFNDTEFVDVIGTSKGKGFQGV 119

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  + THG     R  G+ G    P +VFK  +M G+MGG+RVT +NL V+ V
Sbjct: 120 VKRHGFGGVGQRTHGQDDRARKPGAIGACSYPAKVFKGMRMGGQMGGDRVTTQNLRVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             ++ L++VKG   G   ++ ++ +
Sbjct: 180 IPEKNLLIVKGSFAGCNGSTVLIEK 204


>gi|330752348|emb|CBL87301.1| ribosomal protein L3 [uncultured Sphingobacteria bacterium]
          Length = 205

 Score =  226 bits (578), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 76/203 (37%), Positives = 118/203 (58%), Gaps = 4/203 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           V+ +K+GMT ++ + G++ P TV+  +   +   ++ + +GY +VQ+ + E K K+ +KP
Sbjct: 4   VIGKKIGMTAIFTVNGKKEPCTVVSCEPNVITQIKSEESDGYSSVQIASIEKKEKSSNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
             G F+    +PK+ + E R    +    VG  F    F  GQ VDV G + GKGF G +
Sbjct: 64  EMGHFAKAKTTPKRVVMEIRDYTGEG--TVGDSFGVEIFEEGQFVDVVGTSKGKGFQGVV 121

Query: 125 KRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           KRH F G   ATHG     R+ GS G    P RVFK  +MAGRMGG RV ++NL ++ VD
Sbjct: 122 KRHGFRGVGEATHGQHNRLRAPGSLGAGSTPSRVFKGTRMAGRMGGERVKMQNLRILKVD 181

Query: 184 DKRGLILVKGCVPGAKKNSWILV 206
            +  ++++ G VPG  K S++++
Sbjct: 182 TENNVLVISGAVPG-HKGSYVII 203


>gi|281212110|gb|EFA86271.1| ribosomal protein L3 [Polysphondylium pallidum PN500]
          Length = 338

 Score =  226 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 107/208 (51%), Positives = 141/208 (67%), Gaps = 3/208 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G + +K+GMT V+ ++   IPVTV+HL N QVV  +    +G  A+QVGA E ++KNV
Sbjct: 59  RVGAIGKKVGMTTVW-VDHVAIPVTVVHLPNNQVVQVKHKVNDGVDALQVGADEIRLKNV 117

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
              M+G F+  +V PK+ L EF V ++   LPVG+  +P +F  GQLV + G++ GKGF 
Sbjct: 118 KGTMKGHFAKADVPPKRILMEFPVTRN-AFLPVGTQITPRHFVPGQLVTIKGVSTGKGFQ 176

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR NF GL ATHGVS+SHRS GSTGCRQ PGRVFK KKM G +G    TV NL+V+ 
Sbjct: 177 GGMKRWNFSGLAATHGVSVSHRSIGSTGCRQTPGRVFKGKKMPGHLGSESTTVLNLQVIQ 236

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
            + + G I++KG VPG KK S+I + DS
Sbjct: 237 CNTELGTIMLKGAVPG-KKGSYIRIIDS 263


>gi|85057802|ref|YP_456718.1| 50S ribosomal protein L3P [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|109893411|sp|Q2NIV4|RL3_AYWBP RecName: Full=50S ribosomal protein L3
 gi|84789907|gb|ABC65639.1| LSU ribosomal protein L3P [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 221

 Score =  226 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 80/216 (37%), Positives = 125/216 (57%), Gaps = 9/216 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+N +G  +PVT++ +    V+  + +D++GY A Q+G  + + KN
Sbjct: 1   MAQGILGKKIGMTQVFNEQGELVPVTIVDVAANVVLQQKNVDQDGYQATQIGFCDKREKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL----LPVGSVFSPSYFTVGQLVDVTGMTI 116
            SKPM G F     +PK+ + E     D +     L VG++ +   F VG LVDVTG + 
Sbjct: 61  TSKPMLGHFKKATTAPKRFIKEINFSSDVNSNLANLVVGALITNDLFQVGDLVDVTGTSK 120

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           GKGF+G++KRHN      +HG S  HR  GS           K KK+ G MG   VT++N
Sbjct: 121 GKGFAGSIKRHNQSRGPESHG-SRYHRRPGSM---GPIKGKLKGKKLPGHMGYETVTIQN 176

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           L ++S+D ++ L L+KG VPG  K  +++++ + K 
Sbjct: 177 LAILSIDTEKNLFLIKGNVPGPNKG-FVMIKSAVKK 211


>gi|26454475|dbj|BAC44803.1| ribosomal protein L3 [Mycoplasma penetrans HF-2]
          Length = 326

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 116/211 (54%), Gaps = 7/211 (3%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RK+GM   +  +GRRIPVT++  +   V+ ++T +KNGY+A +VG  + + K ++KP
Sbjct: 20  ILGRKIGMIQSFLEDGRRIPVTIIQAEPNVVLENKTQEKNGYVATKVGFQQIEEKKLNKP 79

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
            +G+F  +     K   EFR   +     VG       F  G  VD   +T GKGF+GA+
Sbjct: 80  QKGYFKKIKTDAFKHTKEFR---NVSGYNVGDKILVDIFNSGDKVDAQAITKGKGFTGAI 136

Query: 125 KRHNFGGLRATHGVSISHRSHGSTG---CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           KR NF      HG    HR  GS           RV K +KM+G  G   VT+ NL VVS
Sbjct: 137 KRWNFKVGPLGHGAGYPHRYQGSISFGRGGSQGQRVPKGQKMSGHYGHELVTISNLTVVS 196

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           ++ ++ LILVKG VPG   NS +L++ + KS
Sbjct: 197 IELEKNLILVKGSVPGPV-NSLVLLKTTVKS 226


>gi|284052648|ref|ZP_06382858.1| 50S ribosomal protein L3 [Arthrospira platensis str. Paraca]
          Length = 229

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 81/226 (35%), Positives = 122/226 (53%), Gaps = 20/226 (8%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M  G++  KLGMT V++   G+ IPVTV+    C +   +T   +GY A+Q+G GE   K
Sbjct: 1   MSVGILGTKLGMTQVFDTETGKAIPVTVVQAGPCTITQVKTEATDGYTAIQLGYGEVPNK 60

Query: 60  ----------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
                            +S   +G  +  N    + L E+R++  D+   +G       F
Sbjct: 61  TRKLNTRKSPDKEVNKYLSHAEQGHLTKSNSPLVRHLKEYRLESTDNF-ELGQQVKVDAF 119

Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
             GQ+VDVTG+++G+GF+G  KR+NF      HG S +HR  GS G    PGRV+  KKM
Sbjct: 120 EPGQIVDVTGISMGRGFAGNQKRNNFRRGPMAHG-SKNHRLPGSIGPGTTPGRVYPGKKM 178

Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           AGR GG ++T + L +V VD +R L+L+KG +PG K    + ++ +
Sbjct: 179 AGRYGGKQITTRKLTIVRVDLERNLLLIKGSIPG-KTGGLLNIKPA 223


>gi|323440070|gb|EGA97785.1| 50S ribosomal protein L3 [Staphylococcus aureus O11]
          Length = 209

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 88/210 (41%), Positives = 114/210 (54%), Gaps = 11/210 (5%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA--------GEAKVKNVSK 63
           MT V+   G  IPVTV+      V+  +T++ +GY A+QVG              K  +K
Sbjct: 1   MTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYKKDAKSNKYANK 60

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G     + +PK+ + EFR   D D   VG   S   F  G ++DVTG++ GKGF GA
Sbjct: 61  PAEGHAKKADAAPKRFIREFR-NVDVDAYEVGQEVSVDTFVAGDVIDVTGVSKGKGFQGA 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KRH       +HG    HR+ GS G   D  RVFK +KM GRMG N VTV+NLEVV VD
Sbjct: 120 IKRHGQSRGPMSHGSH-FHRAPGSVGMASDASRVFKGQKMPGRMGRNTVTVQNLEVVQVD 178

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +  +ILVKG VPG KK   + +R S K  
Sbjct: 179 TENKVILVKGNVPGPKKG-LVEIRTSIKKG 207


>gi|254456207|ref|ZP_05069636.1| ribosomal protein L3 [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083209|gb|EDZ60635.1| ribosomal protein L3 [Candidatus Pelagibacter sp. HTCC7211]
          Length = 236

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 100/210 (47%), Positives = 138/210 (65%), Gaps = 2/210 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
             ++ +K+GMT  +   G+ +PVTVL ++  +VV     +K GY AVQ+G G+ K   ++
Sbjct: 4   IALMGKKIGMTREFYKTGQLVPVTVLKVEKARVVQVIDEEKRGYKAVQLGYGKIKNSKLT 63

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K M+GFF+  N   K+KL E+R+ KD +    G+ F    F   + VD    TIGKGF+G
Sbjct: 64  KAMKGFFAKKNTEAKRKLKEYRI-KDTEAYKEGNEFGLEIFKDIKFVDTRSKTIGKGFAG 122

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKR NFGGLRA+HGVSISHR+HGSTG  QDPG+VFK KKMAG MG    T+ N+E+V  
Sbjct: 123 AMKRWNFGGLRASHGVSISHRAHGSTGHSQDPGKVFKGKKMAGHMGDRLRTMLNIEIVKT 182

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +  L+ +KG +PG+ KN+ + VR S K+
Sbjct: 183 DLENELLYLKGSIPGS-KNTEVFVRKSVKN 211


>gi|194383748|dbj|BAG59232.1| unnamed protein product [Homo sapiens]
          Length = 375

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 77/221 (34%), Positives = 116/221 (52%), Gaps = 5/221 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKV 58
            R G++A KLGM  ++  +G++  VT+L + +C V+ + + +  NG MA + VG      
Sbjct: 122 FRVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSR 181

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
              +  +  F+  + + PK+ +  F +  +  + P G+    ++F  GQ VDVT  TIGK
Sbjct: 182 FRKATSILEFYRELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGK 240

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G MKR  F G  ATHG + +HR  G+     D GRV+   KM G+ G    T   L+
Sbjct: 241 GFQGVMKRWGFKGQPATHGQTKTHRRPGAV-ATGDIGRVWPGTKMPGKTGNIYRTEYGLK 299

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           V  ++ K  +I V G VPG  KN  + V+DS   A    GK
Sbjct: 300 VWRINTKHNIIYVNGSVPG-HKNCLVKVKDSKLPAYKDLGK 339


>gi|149247048|ref|XP_001527949.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146447903|gb|EDK42291.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 278

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 91/210 (43%), Positives = 126/210 (60%), Gaps = 1/210 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+   K GM   +  +G +   TV+ +D+C+V+  +T D++GY A  +G  +      
Sbjct: 59  RPGLFGIKRGMITWFTPKGEQFAATVIEIDSCEVIGQKTRDQHGYDANIIGTIDKLKNYP 118

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            +     F    VSPK K  EFRV   ++L+PVG+     YF+VGQ+VD+ G+T GKGF+
Sbjct: 119 REAELKMFEEAGVSPKHKFGEFRVLDTNNLIPVGTELKADYFSVGQMVDIKGITKGKGFA 178

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR NF G  ATHGVS +HR+ GS G  Q+PGRV   KKM GRMG +  T  N EV+ 
Sbjct: 179 GVMKRWNFAGNNATHGVSKAHRTPGSMGGNQNPGRVLPGKKMPGRMGCDNRTEFNKEVLH 238

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           VD   GL++VKG +PG  K S + + D+ K
Sbjct: 239 VDGDAGLLIVKGNIPGPNK-SIVRISDALK 267


>gi|225873078|ref|YP_002754537.1| ribosomal protein L3 [Acidobacterium capsulatum ATCC 51196]
 gi|225791691|gb|ACO31781.1| ribosomal protein L3 [Acidobacterium capsulatum ATCC 51196]
          Length = 246

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 74/225 (32%), Positives = 122/225 (54%), Gaps = 12/225 (5%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVKNV 61
           +G++ +K+GMT V++ +G   P+TVL    C +   +T  K+GY A Q+G  E  K   V
Sbjct: 4   TGILGKKIGMTQVFDEKGEVHPITVLQAGPCVITQLKTAAKDGYDAAQIGLVEFVKDSKV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQ--------KDDDLLPVGSVFSPSYFTVGQLVDVTG 113
           +KPM+G F+  +V+P + + E  V+        + +  +  G       F   + VD+ G
Sbjct: 64  TKPMKGHFAKSDVAPVRMIKEVDVETAAPSAEGESNGAVKAGDRVLVDIFADEKYVDIIG 123

Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
            + G+GF+G ++RH FGG   +HG     +  GS G    P RVF  ++M G MG +RVT
Sbjct: 124 TSKGRGFAGVVRRHGFGGGPKSHGHMF--QVQGSIGASSFPSRVFPGQRMPGHMGTDRVT 181

Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           V+NL +  +D    LI+V+G VPG  ++ ++L+  +       +G
Sbjct: 182 VRNLRIRGIDLDENLIMVEGAVPGP-RDGYVLISKAKAPPRERRG 225


>gi|269115073|ref|YP_003302836.1| 50S ribosomal protein L3 [Mycoplasma hominis]
 gi|268322698|emb|CAX37433.1| 50S ribosomal protein L3 [Mycoplasma hominis ATCC 23114]
          Length = 268

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 79/215 (36%), Positives = 121/215 (56%), Gaps = 6/215 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT ++  EG+ IPVTV+ +    V    T +KNGY+A+Q+   + K   + 
Sbjct: 2   KGILGRKVGMTQLFTSEGKLIPVTVVEVKPNVVTKVLTSEKNGYVALQLATEDKKSSRII 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP   +F   N +PK+ + E R   D     +G     S FT G++VDVT ++ GKGF+G
Sbjct: 62  KPEVNYFKQANTTPKRFVKEIR---DMSGFSLGDTVDASLFTAGEVVDVTAISKGKGFAG 118

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180
            +KR N      +HG     +    TG   D    RV+K   M G +G  +VTV+NLEVV
Sbjct: 119 TIKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVWKGMTMPGHLGAEQVTVQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             D +  ++L+KG VPGA K ++++++ + KS  N
Sbjct: 179 KEDAENNILLIKGSVPGA-KGAFLIIKTAKKSIKN 212


>gi|311268535|ref|XP_001925073.2| PREDICTED: 39S ribosomal protein L3, mitochondrial [Sus scrofa]
          Length = 399

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 72/216 (33%), Positives = 114/216 (52%), Gaps = 5/216 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGY--MAVQVGAGEAKVK 59
           R G++A KLGM  ++  +G++  VT+L + +C V+ +   + +     A+ VG       
Sbjct: 147 RVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTPKENHNGRMAALTVGGKTVSHF 206

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           + S  +  F+  + + PK+K+  F V ++  + P G+    ++F  GQ VDVT  TIGKG
Sbjct: 207 HKSASILEFYQELGLPPKQKVKIFNVTENAVIKP-GTPLYAAHFRPGQYVDVTAKTIGKG 265

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G M+R  F G  ATHG + +HR  G+     D  RV+   KM G++G    T   L+V
Sbjct: 266 FQGVMRRWGFKGQPATHGQTKTHRRPGAI-STGDVARVWPGTKMPGQLGNIDRTAFGLKV 324

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             ++ K  +I V G VPG  KN  + ++DS   A  
Sbjct: 325 WRINTKHNIIYVNGSVPG-HKNCLVKIKDSKLPAYK 359


>gi|13357791|ref|NP_078065.1| 50S ribosomal protein L3 [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|167972002|ref|ZP_02554279.1| ribosomal protein L3 [Ureaplasma parvum serovar 6 str. ATCC 27818]
 gi|170762111|ref|YP_001752314.1| 50S ribosomal protein L3 [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|42559705|sp|Q9PQR0|RL3_UREPA RecName: Full=50S ribosomal protein L3
 gi|189029487|sp|B1AIM0|RL3_UREP2 RecName: Full=50S ribosomal protein L3
 gi|11276669|pir||H82914 ribosomal protein L3 UU231 [imported] - Ureaplasma urealyticum
 gi|6899201|gb|AAF30640.1|AE002122_9 ribosomal protein L3 [Ureaplasma parvum serovar 3 str. ATCC 700970]
 gi|168827688|gb|ACA32950.1| ribosomal protein L3 [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|186700755|gb|EDU19037.1| ribosomal protein L3 [Ureaplasma parvum serovar 6 str. ATCC 27818]
          Length = 233

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 78/210 (37%), Positives = 115/210 (54%), Gaps = 8/210 (3%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++  K+GMT V+   G+ +  TV++++  +V+  +T +K+GY A+Q+G    K K ++KP
Sbjct: 4   LLGTKVGMTQVFTETGKAVAATVIYVEPNKVLAVKTNEKDGYSAIQIGYETVKEKALNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + G F   N  PK+ + EFR    D +  VG+  + S F  GQLV+    T G GF+G++
Sbjct: 64  LLGQFKKANSDPKRHIKEFR----DVVAEVGAELTVSEFEPGQLVNAQAYTKGHGFTGSI 119

Query: 125 KRHNFGGLRATHGVSISHRSHGSTG---CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           KRHNF      HG    HR  GS           RVFK  K+ G  G   VT KNL V+ 
Sbjct: 120 KRHNFSMGPMGHGAGYPHRYVGSIAKGRGGSQAQRVFKGTKLPGHYGHELVTTKNLLVLD 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V     LIL+KG +PG  K S +L++ + K
Sbjct: 180 VKANENLILIKGAIPGP-KGSIVLLKSAKK 208


>gi|91786167|ref|YP_547119.1| 50S ribosomal protein L3 [Polaromonas sp. JS666]
 gi|123165529|sp|Q12GX1|RL3_POLSJ RecName: Full=50S ribosomal protein L3
 gi|91695392|gb|ABE42221.1| LSU ribosomal protein L3P [Polaromonas sp. JS666]
          Length = 227

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 89/220 (40%), Positives = 128/220 (58%), Gaps = 3/220 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  +PVTV+ + N +V   +T   +GY A+QV  G  K   V+K
Sbjct: 8   GLLGRKVGMMRLFTDDGDTVPVTVVDVSNNRVTQVKTEANDGYDALQVAFGARKASRVTK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVF-SPSYFTVGQLVDVTGMTIGKGFS 121
           P  G  +   V   + L EFRV  D       G+V  +   F VGQLVDV G +IGKG++
Sbjct: 68  PAAGHLAKAGVEAGEILKEFRVTADVAGKYAAGTVVPAADVFAVGQLVDVQGTSIGKGYA 127

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHN    RA+HG S SH   GS G  QDPGRVF  K+M G +G   VT +NL +V 
Sbjct: 128 GTIKRHNMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTVTTQNLNIVR 187

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
           +D+ R L++++G VPG+ K  ++ VR + K+      K +
Sbjct: 188 IDEARQLLMIRGAVPGS-KGGFVTVRAAIKAKPTTAAKGA 226


>gi|283768462|ref|ZP_06341374.1| 50S ribosomal protein L3 [Bulleidia extructa W1219]
 gi|283104854|gb|EFC06226.1| 50S ribosomal protein L3 [Bulleidia extructa W1219]
          Length = 252

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 116/211 (54%), Gaps = 4/211 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RKLGMT V+ I+G  IPVTV+ +    V+  +T + +GY AVQ+G  + K +  +
Sbjct: 2   KGILGRKLGMTQVFTIDGTLIPVTVIDVKPNVVLQKKTKETDGYEAVQLGYEDVKEQRSN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G     N +PKK + E R  +  +   VG+      F  G +VDV G + GKG+SG
Sbjct: 62  KPAIGHAKKANTAPKKYIKEIRADEMMN-FEVGAEVKADLFKAGDVVDVQGTSKGKGYSG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            + R+N      +HG S  HR  GS      + G V K   M G+ GG   T +NL+V+ 
Sbjct: 121 TIVRNNAARGPMSHG-SGHHRHIGSLATNGRNNGVVNKGTAMPGQEGGYTTTNQNLQVIK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VD + G ILVKG +PG +K   ++++ + K 
Sbjct: 180 VDAEEGYILVKGNIPGPRKG-LVVIKTTVKP 209


>gi|313677120|ref|YP_004055116.1| LSU ribosomal protein l3p [Marivirga tractuosa DSM 4126]
 gi|312943818|gb|ADR23008.1| LSU ribosomal protein L3P [Marivirga tractuosa DSM 4126]
          Length = 212

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 85/210 (40%), Positives = 121/210 (57%), Gaps = 7/210 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +Y ++GR +  TV+    C V   +  + +GY A+Q+G  E K KN  
Sbjct: 2   SGIIGKKIGMTSIYGVDGRNVACTVIEAGPCVVTQVKKEETDGYSAIQLGYEERKEKNTP 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFR----VQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIG 117
           K ++G F +   +PKKKL EFR         D   +G   +    F  G  VDV G + G
Sbjct: 62  KALQGHFKNAQTTPKKKLAEFREYEGYDTFVDKFTLGQTVTIGDVFEEGDYVDVAGSSKG 121

Query: 118 KGFSGAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           KGF G +KRH FGG  +ATHG     R+ GS G    P RVF   +MAGR GG+RV   N
Sbjct: 122 KGFQGVVKRHGFGGVGQATHGQHNRQRAPGSIGGASYPARVFPGMRMAGRTGGDRVKNTN 181

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILV 206
           L V+ +  ++ L+LV G +PGA KNS++++
Sbjct: 182 LRVLKLIPEKNLLLVSGSIPGA-KNSFVII 210


>gi|327274961|ref|XP_003222243.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like [Anolis
           carolinensis]
          Length = 329

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 78/216 (36%), Positives = 117/216 (54%), Gaps = 5/216 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NG-YMAVQVGAGEAKVK 59
           R G++A KLGM  ++  +G ++ VT+L + +C V+ H   ++ +G Y A+ VGA      
Sbjct: 78  RVGIIAVKLGMMPLWTKKGEKLAVTLLQVQDCHVIRHIPKEESDGKYPALIVGAKNVSQF 137

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             S  +   + +V +  K+K+  FRV ++  ++  G+    ++F  GQ VDVT  TIGKG
Sbjct: 138 QKSVSILEMYRAVGLPVKQKISTFRVTEN-AIIKPGTPLYAAHFRPGQYVDVTAKTIGKG 196

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR  F G  A+HG + +HR  G+        +VFK KKM G++G    T K L+V
Sbjct: 197 FQGVMKRWGFKGQPASHGQTKTHRRPGAI-SNSKVAKVFKGKKMPGQLGNWYRTTKGLKV 255

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             V  K  +I V G VPG  +N  + V DS   A  
Sbjct: 256 WRVSTKFNVIYVHGSVPG-HRNCLVKVSDSSLPAYR 290


>gi|196228455|ref|ZP_03127322.1| ribosomal protein L3 [Chthoniobacter flavus Ellin428]
 gi|196227858|gb|EDY22361.1| ribosomal protein L3 [Chthoniobacter flavus Ellin428]
          Length = 215

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 89/208 (42%), Positives = 129/208 (62%), Gaps = 3/208 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +K+GMT VY+ +G+  PVTV+      V+  +T + +GY+ VQVG    K + 
Sbjct: 1   MKIGLLGKKIGMTRVYDDKGKATPVTVIEAGGNTVLQTKTQENDGYVGVQVGFDVQKEQR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++P+ G F      PKK + EFR+  DD  L      S S F VG +VDV G + GKGF
Sbjct: 61  VTQPLLGHFKKAGSEPKKLVKEFRL-PDDVKLDGALDLSVSQFAVGDVVDVIGRSKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +++HN  G  A+HG S+ HR +G+ G R  PGR++KN  M G MG  RVTV+NL+VV
Sbjct: 120 QGVIRKHNMAGQGASHG-SMMHRRNGAIGNRSTPGRIWKNMGMPGHMGDERVTVQNLKVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
            V  + G+IL+ G VPGA   ++I++R 
Sbjct: 179 QVRPEEGVILISGAVPGAN-GTYIVIRP 205


>gi|269468075|gb|EEZ79789.1| ribosomal protein L3 [uncultured SUP05 cluster bacterium]
          Length = 278

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 97/223 (43%), Positives = 134/223 (60%), Gaps = 9/223 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG------ 54
           M  G+V +KLGMT + + +G    V+V+ ++  +VV  RT + +GY AVQV  G      
Sbjct: 1   MAIGLVGQKLGMTRIMSEDGSATAVSVIKIEANRVVQTRTTEVDGYSAVQVTTGAKVNKK 60

Query: 55  -EAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113
            EAKV+ V   ++G ++  +      L+EFR   D + +   S F  S F  G  VDVTG
Sbjct: 61  GEAKVRRVPSAIKGHYAKASQDIGLGLWEFR--ADANEIGDASSFDLSIFGAGHYVDVTG 118

Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
            + GKGF G +KRHNF    ATHG SISHR+ GSTG  Q+PGRVFK KKMAG MG  +VT
Sbjct: 119 QSKGKGFQGGVKRHNFQMQDATHGNSISHRAIGSTGQCQEPGRVFKGKKMAGHMGDEQVT 178

Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
            + LE++ VD +R L+LVKG +PG+K     ++  + K  +N 
Sbjct: 179 EECLEIIRVDSERNLLLVKGAIPGSKSGFVKVMLSAKKDKINS 221


>gi|121603120|ref|YP_980449.1| 50S ribosomal protein L3 [Polaromonas naphthalenivorans CJ2]
 gi|166233174|sp|A1VIQ0|RL3_POLNA RecName: Full=50S ribosomal protein L3
 gi|120592089|gb|ABM35528.1| LSU ribosomal protein L3P [Polaromonas naphthalenivorans CJ2]
          Length = 226

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 87/215 (40%), Positives = 125/215 (58%), Gaps = 3/215 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GM  ++  +G  +PVTV+ + N +V   +T   +GY A+QV  G  K   V+K
Sbjct: 8   GLLGRKVGMMRLFTDDGDTVPVTVVDVSNNRVTQVKTEANDGYDALQVAFGSRKASRVTK 67

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVF-SPSYFTVGQLVDVTGMTIGKGFS 121
           P  G  +   V   + L EFRV  D       G+V  +   F VGQLVDV G +IGKGF+
Sbjct: 68  PEAGHLAKAGVEAGEILKEFRVTADVAGKYAAGTVVPAADIFAVGQLVDVQGTSIGKGFA 127

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRH     RA+HG S SH   GS G  QDPGRVF  K+M G +G    T +NL++V 
Sbjct: 128 GTIKRHKMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTKTTQNLDIVR 187

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           +D+ R L++++G VPG+ K  ++ VR + K+    
Sbjct: 188 IDEARQLLMIRGAVPGS-KGGFVTVRAAIKAKPTA 221


>gi|71894653|ref|YP_278761.1| 50S ribosomal protein L3 [Mycoplasma synoviae 53]
 gi|109893527|sp|Q4A5C1|RL3_MYCS5 RecName: Full=50S ribosomal protein L3
 gi|71851441|gb|AAZ44050.1| 50S ribosomal protein L3 [Mycoplasma synoviae 53]
          Length = 268

 Score =  225 bits (575), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 86/220 (39%), Positives = 124/220 (56%), Gaps = 7/220 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT +Y+  G  IPVTV+ +    V    T   NGY AVQ+   + + K  +
Sbjct: 2   KGILGRKVGMTQIYSETGTAIPVTVIEVKPNVVTKVLTKQSNGYEAVQLSVFDKREKLSN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F   N +PK+ + E R   + +   +G     + F+VG+LVDV+G + GKGF+G
Sbjct: 62  KPETGHFKKANTTPKRFVKEIR---NMNGYELGQSVLVNIFSVGELVDVSGTSKGKGFAG 118

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180
           A+KR+N      +HG     +    TG   D    RVFK   M G +G  + T++NLEVV
Sbjct: 119 AIKRYNQHIGPKSHGGGGGSQPIRQTGSLGDISGNRVFKGMTMPGHLGSEKATLQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
            VD K  L+LVKG VPGA KNS+++V+ + K  +  K  V
Sbjct: 179 KVDLKENLLLVKGSVPGA-KNSFVVVKSAVKG-LPAKAAV 216


>gi|37912950|gb|AAR05282.1| ribosomal protein L3 [uncultured marine gamma proteobacterium
           EB000-45B06]
 gi|40063177|gb|AAR38014.1| ribosomal protein L3 [uncultured marine bacterium 562]
          Length = 211

 Score =  225 bits (575), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 79/213 (37%), Positives = 122/213 (57%), Gaps = 2/213 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K GMT ++  +G  IPVT + +    +   +T  ++GY A  V     K  N
Sbjct: 1   MSIGLIGKKSGMTRLFLEDGESIPVTAVSVCGNFLADIKTTSRDGYNAFVVSKVN-KSNN 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+K    F+  +N+ P          +  D + VG   +   F +GQ VDVTG + GKG+
Sbjct: 60  VNKSKSEFYKKINLDPGILAEFRSGDEVADDMKVGKHLTADIFEIGQYVDVTGTSKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNF    ATHG S+SHR+HGS G  Q PGRV+K KKM+G MG  + TV++L++V
Sbjct: 120 AGVIKRHNFAMQDATHGNSLSHRAHGSIGQCQTPGRVWKGKKMSGHMGNVQKTVQSLKIV 179

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            +D +  ++ +KG VPG    S + ++ + K +
Sbjct: 180 DLDVENSVLYIKGAVPGFN-GSELKIKPALKKS 211


>gi|167972621|ref|ZP_02554898.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|167988466|ref|ZP_02570137.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|168362040|ref|ZP_02695219.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|195867671|ref|ZP_03079673.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|209553992|ref|YP_002284630.1| 50S ribosomal protein L3 [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225550465|ref|ZP_03771414.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225551135|ref|ZP_03772081.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|226730586|sp|B5ZB40|RL3_UREU1 RecName: Full=50S ribosomal protein L3
 gi|171903367|gb|EDT49656.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|184209454|gb|EDU06497.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188018930|gb|EDU56970.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|195660728|gb|EDX53983.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|209541493|gb|ACI59722.1| 50S ribosomal protein L3 [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225378950|gb|EEH01315.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|225379619|gb|EEH01981.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 233

 Score =  225 bits (574), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 78/210 (37%), Positives = 115/210 (54%), Gaps = 8/210 (3%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++  K+GMT V+   G+ +  TV++++  +V+  +T +K+GY A+Q+G    K K ++KP
Sbjct: 4   LLGTKVGMTQVFTETGKAVAATVIYVEPNKVLAVKTNEKDGYNAIQIGYETVKEKALNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + G F   N  PK+ + EFR    D +  VG+  + S F  GQLV+    T G GF+G++
Sbjct: 64  LLGQFKKANSDPKRHIKEFR----DVVAEVGAELTVSEFEPGQLVNAQAYTKGHGFTGSI 119

Query: 125 KRHNFGGLRATHGVSISHRSHGSTG---CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           KRHNF      HG    HR  GS           RVFK  K+ G  G   VT KNL V+ 
Sbjct: 120 KRHNFSMGPMGHGAGYPHRYVGSIAKGRGGSQAQRVFKGTKLPGHYGHELVTTKNLLVLD 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           V     LIL+KG +PG  K S +L++ + K
Sbjct: 180 VKANENLILIKGAIPGP-KGSIVLLKSAKK 208


>gi|213403778|ref|XP_002172661.1| 50S ribosomal protein L3 [Schizosaccharomyces japonicus yFS275]
 gi|212000708|gb|EEB06368.1| 50S ribosomal protein L3 [Schizosaccharomyces japonicus yFS275]
          Length = 264

 Score =  225 bits (574), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 126/210 (60%), Gaps = 2/210 (0%)

Query: 2   RSGVVARKLGMTCVYNIEG-RRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           R G +  K GMT V++    +++PVTVL  D  QVV  +T  ++GY AVQ+GAG     N
Sbjct: 47  RPGAILFKKGMTSVWDESTHQQVPVTVLQFDRVQVVGLKTEKRDGYSAVQMGAGLRLPHN 106

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           VS+ ++G FS+  V PK+ + EF+V+ D  L  VG+V +P YF VGQ VDV  +T GKG 
Sbjct: 107 VSRALQGHFSANGVYPKRYVKEFQVKDDSCLPKVGTVLTPEYFQVGQHVDVKALTKGKGT 166

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR    G   +HG S SHRS G TG  + P RV   KKM+G MG    TV+N+ V 
Sbjct: 167 AGVMKRWGLSGGNDSHGASKSHRSAGGTGQAKIPARVLPGKKMSGHMGHQFRTVQNMLVW 226

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           +V  +   ILVKG VPG  +   + V DS 
Sbjct: 227 AVHPEHDCILVKGAVPGPVEG-VVYVSDSI 255


>gi|255722617|ref|XP_002546243.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
 gi|240136732|gb|EER36285.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
          Length = 279

 Score =  225 bits (574), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 94/210 (44%), Positives = 128/210 (60%), Gaps = 1/210 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+ A K GM   +   G  IP TVL +D+C+V+  +  +  GY ++ VG+ +    N 
Sbjct: 57  RPGLFAIKRGMITWFRESGEAIPATVLEIDSCEVINSKNSEDYGYDSILVGSIDKLKNNK 116

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            +     F    +SPK K+ EFRV K D+L+  G+  +  YF VGQ VD+ G+T GKGF+
Sbjct: 117 YETSIKMFEDAGISPKYKIGEFRVLKSDNLIEKGTELTADYFEVGQKVDIKGITKGKGFA 176

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR  F G RATHGVS +HR+ G+ G  Q+PGRV   KKM GRMG N  T  NLEV+ 
Sbjct: 177 GVMKRWGFSGGRATHGVSKAHRTPGAMGGNQNPGRVLPGKKMPGRMGCNNKTEFNLEVLF 236

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            D + G+++VKG VPG K+   + VRD+ K
Sbjct: 237 TDKEAGVLIVKGNVPGPKRG-IVRVRDAIK 265


>gi|148689149|gb|EDL21096.1| mitochondrial ribosomal protein L3, isoform CRA_a [Mus musculus]
          Length = 304

 Score =  225 bits (573), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 73/212 (34%), Positives = 108/212 (50%), Gaps = 5/212 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
            R G++A KLGM  ++  +G++  VT+L + +C V+ +   + +      +  G   V  
Sbjct: 95  FRVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKIAALTVGGKTVSR 154

Query: 61  VSKP--MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
             KP     F+  + + PK+    F V  D+ ++  G+    ++F  GQ VDVT  TIGK
Sbjct: 155 FYKPDSRLEFYRDLGLPPKQIHKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGK 213

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G MKR  F G  A+HG + +HR  G+     D  RV+   KM GRMG    TV  L+
Sbjct: 214 GFQGVMKRWGFKGQPASHGQTKTHRRPGAI-STGDIARVWPGTKMPGRMGNQNRTVYGLK 272

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           V  V+ K  +I V G VPG  KN  + V  + 
Sbjct: 273 VWRVNTKHNIIYVNGSVPG-HKNCLVKVCTAV 303


>gi|11467717|ref|NP_050769.1| ribosomal protein L3 [Guillardia theta]
 gi|3914660|sp|O46894|RK3_GUITH RecName: Full=50S ribosomal protein L3, chloroplastic
 gi|3603042|gb|AAC35703.1| ribosomal protein L3 [Guillardia theta]
          Length = 204

 Score =  225 bits (573), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 83/203 (40%), Positives = 121/203 (59%), Gaps = 2/203 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++  KLGMT +++  G  IPVT+L +  C V   ++  K+ Y A+Q+G  +   K 
Sbjct: 1   MKIGLLGTKLGMTQIFDDNGSAIPVTILKVGPCYVTNLKSDTKDNYNAIQIGYQQVDAKK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP  G     N+ P K L E++V        +      S F +GQ+V V+G++IGKGF
Sbjct: 61  LTKPQLGHLQVNNLPPLKHLKEYKVDATH-TFTIAQQLDVSIFELGQIVSVSGVSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNF     THG S +HR  GS G    P +V K KKMAGR+GG++VT KNL VV
Sbjct: 120 AGTVKRHNFTRGPMTHG-SKNHREPGSIGQGSTPAKVHKGKKMAGRLGGHQVTTKNLTVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSW 203
            +D    ++++KGCVPG + N  
Sbjct: 179 HLDKDNNVLVLKGCVPGKRGNIL 201


>gi|261880882|ref|ZP_06007309.1| 50S ribosomal protein L3 [Prevotella bergensis DSM 17361]
 gi|270332389|gb|EFA43175.1| 50S ribosomal protein L3 [Prevotella bergensis DSM 17361]
          Length = 204

 Score =  225 bits (573), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 79/205 (38%), Positives = 120/205 (58%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ RK+GMT V++ +G+ +P TV+    C V   +T++ +GY AVQ+G GEAK    +K
Sbjct: 3   GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVENDGYEAVQIGFGEAKKSRTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           PM G F     +PKK L EF+ ++D     +G   +   F     V+V G + GKGF G 
Sbjct: 63  PMAGIFKKAGTTPKKHLAEFKFEED---YNLGDAITVELFADADFVNVVGTSKGKGFQGV 119

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH F G  + THG     R  GS G    P +VFK  +M G+MGG+RV  +NL+V+ V
Sbjct: 120 VKRHGFAGVGQRTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVKTRNLKVLKV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             ++ L++VKG   G K ++ ++ +
Sbjct: 180 IPEQNLLIVKGSFAGCKGSTVLIEK 204


>gi|325280968|ref|YP_004253510.1| 50S ribosomal protein L3 [Odoribacter splanchnicus DSM 20712]
 gi|324312777|gb|ADY33330.1| 50S ribosomal protein L3 [Odoribacter splanchnicus DSM 20712]
          Length = 207

 Score =  224 bits (572), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 86/205 (41%), Positives = 127/205 (61%), Gaps = 4/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V+++EG+ IP TV+    C V   +T++K+GY A+Q+G  E K K+ +K
Sbjct: 5   GLIGKKVGMTSVFSVEGKSIPCTVIECGPCVVTQVKTIEKDGYEALQLGFDEKKEKHTTK 64

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
            + G F     +PK+KL EF    ++    +G V   +       VD+ G + GKG+ G 
Sbjct: 65  QLSGHFKKAGTTPKRKLVEFAGFAEEH--KLGDVIDVTILEGTAYVDIVGTSKGKGYQGV 122

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH FGG  +ATHG     R  GS G    P RVFK  +M GRMGG+RVTV+NLEV+ V
Sbjct: 123 VKRHGFGGVGQATHGQHNRLRKPGSIGACSTPARVFKGMRMGGRMGGDRVTVENLEVLKV 182

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
             +  L+LVKG VPG+ K S+++++
Sbjct: 183 IPENNLLLVKGSVPGS-KGSYVIIQ 206


>gi|257456892|ref|ZP_05622073.1| 50S ribosomal protein L3 [Treponema vincentii ATCC 35580]
 gi|257445601|gb|EEV20663.1| 50S ribosomal protein L3 [Treponema vincentii ATCC 35580]
          Length = 208

 Score =  224 bits (572), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 87/210 (41%), Positives = 123/210 (58%), Gaps = 5/210 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GMT +++ EGR  PVTVL +    VV  +  D  GY AV +G GE K   VS
Sbjct: 2   VGLIGKKIGMTQLFDEEGRLTPVTVLQVVPNTVVAVKDADHFGYEAVVLGTGELKEGRVS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K     F+   V+P + L EFR    D  + VG+          + +D+T ++ GKGF G
Sbjct: 62  KVYANQFAE-GVAPVRLLKEFRGF--DKEVAVGAKIGVEVLESVRYLDITAISKGKGFQG 118

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR  FGG RA+HG S  HR  GSTG    PGR FKN KM G MG  RVTV+NL +  +
Sbjct: 119 VVKRWGFGGGRASHG-SKFHREAGSTGQCTSPGRSFKNVKMPGHMGAERVTVQNLRIEKI 177

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D + G+++V+G VPG KK++ + ++ + K 
Sbjct: 178 DPELGVVMVRGSVPG-KKDAVVFLKSAVKR 206


>gi|301059231|ref|ZP_07200168.1| 50S ribosomal protein L3 [delta proteobacterium NaphS2]
 gi|300446666|gb|EFK10494.1| 50S ribosomal protein L3 [delta proteobacterium NaphS2]
          Length = 207

 Score =  224 bits (572), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 85/209 (40%), Positives = 117/209 (55%), Gaps = 2/209 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M + +  +K+GMT  +   G+  PVTV+ +  C V   +T++K GY A+Q+G G    K 
Sbjct: 1   MVNKLFGKKIGMTRYFLEGGKSEPVTVVKIAPCVVTQKKTVEKEGYNAIQIGFGPKDEKR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP++G F +        L E +V  D D   +G       F +G  V V G + G+GF
Sbjct: 61  TNKPLKGHFEASGGKCFAYLNEVKVD-DVDAFELGQEIKSDVFAIGDTVHVRGRSKGRGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKR  FGG R THG S SHR  GS GC  DP RV K +KM GRMG   VT KNL+VV
Sbjct: 120 AGVMKRWGFGGGRKTHG-SRSHRVPGSIGCSADPARVVKGRKMPGRMGNTHVTTKNLKVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            +     ++L+KG VPGA+ N   + + S
Sbjct: 179 DIRPDMDILLLKGPVPGARGNLLEIFKAS 207


>gi|163783906|ref|ZP_02178880.1| ribosomal protein L03 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880827|gb|EDP74357.1| ribosomal protein L03 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 230

 Score =  224 bits (572), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 89/211 (42%), Positives = 128/211 (60%), Gaps = 5/211 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M +G++ +K+GMT ++   G+ IPVTV+ ++   +V  RT +K+GY AV +G GE K K 
Sbjct: 1   MPTGIIGKKIGMTRIF-KNGKAIPVTVIQVEPNYIVGIRTKEKDGYSAVILGTGEKKEKR 59

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119
             KP+   F    + P + L EF +++ +    VG        F  G LVDV G + G+G
Sbjct: 60  TPKPLLKIFEKAGLKPLRVLKEFPLKEGEQP-EVGKEVKVEEVFQPGDLVDVAGKSKGRG 118

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+ AMKR +FGG R +HG S  HR+ GS G   +P RVFK K+MAG  G  RV+V  LEV
Sbjct: 119 FTSAMKRWDFGGFRKSHG-SRYHRAVGSVGAATEPSRVFKGKRMAGHYGNERVSVLGLEV 177

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           V +  ++ +ILVKG VPGA K S++ ++ S 
Sbjct: 178 VDIIPEKSVILVKGSVPGATK-SYVELKASV 207


>gi|189218695|ref|YP_001939336.1| Ribosomal protein L3 [Methylacidiphilum infernorum V4]
 gi|189185553|gb|ACD82738.1| Ribosomal protein L3 [Methylacidiphilum infernorum V4]
          Length = 221

 Score =  224 bits (572), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 83/211 (39%), Positives = 129/211 (61%), Gaps = 3/211 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ARK+GMT +++  G   P+TVL  +   VV  +   +   + +QVG      + +SK
Sbjct: 14  GIMARKIGMTQLFDATGTMHPLTVLVAEPNVVVQCKKEGEGKEVRLQVGYEALPERKLSK 73

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G +    +SP++ L EF  + ++   P G +   S F  G+ VDV G+T GKGF G 
Sbjct: 74  PLLGHYKKSGISPRRHLKEFVFESEESWQP-GQLLDVSRFNEGEKVDVIGITKGKGFQGV 132

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +K+H FGG  A+HG S +HR +G+ G R  PGRVFKN+ M G MG  +VT++NL++  + 
Sbjct: 133 IKKHGFGGQPASHG-SKTHRRNGAIGERSFPGRVFKNQGMPGHMGRKKVTIQNLDLFKII 191

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
            +  ++LVKG VPGA K   ++VR + K++V
Sbjct: 192 PEDNVLLVKGSVPGA-KGDMVIVRKAIKASV 221


>gi|160914559|ref|ZP_02076774.1| hypothetical protein EUBDOL_00565 [Eubacterium dolichum DSM 3991]
 gi|158433717|gb|EDP12006.1| hypothetical protein EUBDOL_00565 [Eubacterium dolichum DSM 3991]
          Length = 234

 Score =  224 bits (572), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 78/219 (35%), Positives = 115/219 (52%), Gaps = 5/219 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RKLGMT V+  +G  IPVTV+      V+  +T++ +GY AVQ+G  + K K  +
Sbjct: 7   KGILGRKLGMTQVFTEDGTLIPVTVVEACPNIVLQKKTVENDGYNAVQIGFEDIKEKRTT 66

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G     N + K+   E R   D   L +G+      F  G+ VDV G + GKG++G
Sbjct: 67  KANVGHAKKANTTAKRFAREVR-DADFADLDLGAEVKVDIFVAGETVDVIGTSKGKGYNG 125

Query: 123 AMKRHNFGGLRATHGVSISHRSHGST---GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            + R+N      THG S + R  GS    G     G++ K   MAG+ GG R T +NL V
Sbjct: 126 TIVRNNAHQGPKTHGGSKNIRHIGSLATNGITSRQGKILKGTIMAGQEGGYRTTNQNLTV 185

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           + VD +   +L+KG VPG K+   ++VR +  S  N + 
Sbjct: 186 IKVDVENNYLLIKGNVPGPKRG-LVMVRSAKCSKGNSEP 223


>gi|46109318|ref|XP_381717.1| hypothetical protein FG01541.1 [Gibberella zeae PH-1]
          Length = 332

 Score =  224 bits (572), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 100/219 (45%), Positives = 140/219 (63%), Gaps = 3/219 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +RSGV+A K GMT ++ +   R+P TVL LD  QVV ++T +KNGY AVQ+G G    +N
Sbjct: 75  LRSGVLAVKKGMTSMF-VGKIRVPCTVLQLDQVQVVANKTREKNGYWAVQIGQGSRDGRN 133

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+ P+ G++ +  ++PK +L EF+V+  D LLPVG    P +F  GQ VDV G + G GF
Sbjct: 134 VTSPLLGYYEAKGIAPKAELAEFKVRDKDGLLPVGVQILPDWFKKGQYVDVKGRSRGMGF 193

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179
           +G MKRH F G  A+HG S +HR+ G+TG  Q  G RV   KKM GRMG   VTV+NL+V
Sbjct: 194 AGGMKRHGFSGQEASHGNSKNHRTIGTTGPSQGSGSRVMPGKKMPGRMGNEFVTVQNLKV 253

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           + VD++ G++LV G + G  K   + ++DS K     + 
Sbjct: 254 MMVDNELGIVLVGGPIAGP-KGRVVRLQDSKKRKAPPQP 291


>gi|293402501|ref|ZP_06646636.1| 50S ribosomal protein L3 [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291304015|gb|EFE45269.1| 50S ribosomal protein L3 [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 241

 Score =  224 bits (571), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 80/222 (36%), Positives = 119/222 (53%), Gaps = 8/222 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RKLGMT V+  EG  IPVTV+      V+  +T++ +GY AVQ+G  + K    +
Sbjct: 16  KGILGRKLGMTQVFTEEGTLIPVTVVEATPNVVLQKKTVENDGYEAVQLGFEDVKETRST 75

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP +G  +  N +PK+   E R  + D  + +G       F  G+ VDV G + GKG++G
Sbjct: 76  KPSKGHAAKANTAPKRFAQEIRDCELD--VNLGDEVKVDIFAAGETVDVIGTSKGKGYNG 133

Query: 123 AMKRHNFGGLRATHGVSISHRSHGST---GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            + R+N      +HG S  HR  GS    G     G++ K   MAG+ GG R T +NL +
Sbjct: 134 TIVRNNAKIGPKSHG-SGHHRHIGSLATNGITSRQGKILKGTIMAGQEGGYRTTNQNLTI 192

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
           V VD +   +L+KG VPG  K   ++VR + K +   K  V+
Sbjct: 193 VKVDVENNYLLIKGNVPGP-KCGLVMVRTA-KCSKGDKAPVT 232


>gi|297671980|ref|XP_002814097.1| PREDICTED: LOW QUALITY PROTEIN: 39S ribosomal protein L3,
           mitochondrial-like [Pongo abelii]
          Length = 374

 Score =  224 bits (571), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 78/221 (35%), Positives = 114/221 (51%), Gaps = 6/221 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKV 58
            R G++A KLGM  ++  +G++  VT+L + +C V+ + + +  NG MA + VG      
Sbjct: 122 FRVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENHNGKMATLSVGGKTVSR 181

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
              +  +  F+  + + PK+ +  F +  +  L         ++F  GQ VDVT  TIGK
Sbjct: 182 FRKATSILEFYRELGLPPKQTVKXFNITDNAALNR--HSLYAAHFRPGQYVDVTAKTIGK 239

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G MKR  F G  ATHG + +HR  G+     D GRV+   KM G+MG    T   L+
Sbjct: 240 GFQGVMKRWGFKGQPATHGQTKTHRRPGAV-ATGDIGRVWPGTKMPGKMGNIYRTEYGLK 298

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           V  ++ K  +I V G VPG  KN  + VRDS   A    GK
Sbjct: 299 VWRINTKHNIIYVNGSVPG-HKNCLVKVRDSSMPAYKDLGK 338


>gi|161723281|ref|NP_758399.2| 50S ribosomal protein L3 [Mycoplasma penetrans HF-2]
 gi|42559645|sp|Q8EUB3|RL3_MYCPE RecName: Full=50S ribosomal protein L3
          Length = 310

 Score =  223 bits (570), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 116/211 (54%), Gaps = 7/211 (3%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ RK+GM   +  +GRRIPVT++  +   V+ ++T +KNGY+A +VG  + + K ++KP
Sbjct: 4   ILGRKIGMIQSFLEDGRRIPVTIIQAEPNVVLENKTQEKNGYVATKVGFQQIEEKKLNKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
            +G+F  +     K   EFR   +     VG       F  G  VD   +T GKGF+GA+
Sbjct: 64  QKGYFKKIKTDAFKHTKEFR---NVSGYNVGDKILVDIFNSGDKVDAQAITKGKGFTGAI 120

Query: 125 KRHNFGGLRATHGVSISHRSHGSTG---CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           KR NF      HG    HR  GS           RV K +KM+G  G   VT+ NL VVS
Sbjct: 121 KRWNFKVGPLGHGAGYPHRYQGSISFGRGGSQGQRVPKGQKMSGHYGHELVTISNLTVVS 180

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           ++ ++ LILVKG VPG   NS +L++ + KS
Sbjct: 181 IELEKNLILVKGSVPGPV-NSLVLLKTTVKS 210


>gi|294155415|ref|YP_003559799.1| 50S ribosomal protein L3 [Mycoplasma crocodyli MP145]
 gi|291600390|gb|ADE19886.1| 50S ribosomal protein L3 [Mycoplasma crocodyli MP145]
          Length = 269

 Score =  223 bits (570), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 82/215 (38%), Positives = 117/215 (54%), Gaps = 6/215 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT VY   G+R+ VTV+ +    V    + +KNGY A+Q+   + K    +
Sbjct: 2   KGILGRKVGMTQVYTETGQRVAVTVIEVQPNVVTKVLSQEKNGYTAIQLAVFDKKASRSN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+    +PK+ + E R   D     +G V   + F  G+LVDVTG + GKGF+G
Sbjct: 62  KPETGHFAKAKTTPKRYVKEVR---DMSGYELGQVLQANVFKAGELVDVTGTSKGKGFAG 118

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180
            +KRHN      +HG     +    TG   D    +V K   M G++G  R TV+NLEVV
Sbjct: 119 TIKRHNQHIGPKSHGGGGGSQPVRQTGSLGDIAGNKVVKGMTMPGQLGNERTTVQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            VD    L+L+KG +PG KK S+++VR   K   N
Sbjct: 179 KVDLVNNLLLIKGSIPGPKK-SFVMVRQGVKGLAN 212


>gi|94266253|ref|ZP_01289960.1| Ribosomal protein L3 [delta proteobacterium MLMS-1]
 gi|93453179|gb|EAT03643.1| Ribosomal protein L3 [delta proteobacterium MLMS-1]
          Length = 209

 Score =  223 bits (570), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 75/202 (37%), Positives = 112/202 (55%), Gaps = 3/202 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GMT V+   G  +PVTV+    C V+  +T+ K GY A+QVG G      ++
Sbjct: 5   MGLLGKKVGMTRVFTETGAAVPVTVIQAGPCVVLQKKTVAKEGYSAIQVGFGPRSEARLN 64

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121
           K   G   +      + + EFRV  D +   +G   S      +G LVD+ G + G+GF 
Sbjct: 65  KAEAGHVKAAGKGGFEFVREFRVS-DPEAYQLGQEISVGDLLNIGDLVDIRGKSKGRGFQ 123

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR+ F G RATHG S+ HR+ G+ GC   P RV K KKM G+MG   +T KN  +V 
Sbjct: 124 GVVKRYGFKGGRATHG-SMFHRAPGAIGCSAWPSRVIKGKKMPGQMGDKYITKKNCTIVD 182

Query: 182 VDDKRGLILVKGCVPGAKKNSW 203
           +  +  +I++KG VPG+ +   
Sbjct: 183 IRPESNVIVLKGGVPGSSQGVL 204


>gi|261749470|ref|YP_003257156.1| 50S ribosomal protein L3 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497563|gb|ACX84013.1| 50S ribosomal protein L3 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 210

 Score =  223 bits (570), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 83/205 (40%), Positives = 127/205 (61%), Gaps = 3/205 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++   LGMT +++  G  IP T++ +  C V+  +T++K+GY A+Q+G  + K K+ +K
Sbjct: 3   GLIGINLGMTSLFSKNGENIPCTIVKVGPCYVIQVKTMEKDGYSAIQLGIIDKKEKHTTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
            ++G F    + PKKKL EF+       + +GS  + + F  G+LVDV G+T GKGF G 
Sbjct: 63  ALQGHFRKSGIFPKKKLLEFK-DVLSPSIKLGSQININSFVEGELVDVRGITKGKGFQGV 121

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH F G    +HG     R+ GS G   DP R+FK KKMAGRMGG  VT+KNL ++ +
Sbjct: 122 VKRHKFSGVGERSHGQHNRLRAPGSVGAGSDPSRIFKGKKMAGRMGGKHVTIKNLTILKI 181

Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
           D    + ++ G VPG  KNS+++++
Sbjct: 182 DVTENIFILNGSVPG-NKNSYLMIK 205


>gi|237837257|ref|XP_002367926.1| ribosomal protein L3p, putative [Toxoplasma gondii ME49]
 gi|211965590|gb|EEB00786.1| ribosomal protein L3p, putative [Toxoplasma gondii ME49]
 gi|221509315|gb|EEE34884.1| 50S ribosomal protein L3, putative [Toxoplasma gondii VEG]
          Length = 514

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 87/209 (41%), Positives = 122/209 (58%), Gaps = 4/209 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K+GM  +++  G R  VTV  +D C V+  RTLDK+GY A  +G G   +  V
Sbjct: 256 RTGLLAYKIGMMSLWDGWGERHAVTVCQVDRCVVMDQRTLDKDGYEACVMGIGYKPIHKV 315

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KPM G +    + PK ++ EF+   D  LLPVG   S  +FT GQ V V+G +  KG+ 
Sbjct: 316 TKPMLGVYIRSQIEPKSRIAEFKCSSD-CLLPVGHEMSVRHFTPGQQVFVSGWSKDKGYL 374

Query: 122 GAMKRHNFGGLRATHGVS-ISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           G  KR  F G  A+HGV   +H S GS G  +    V++ KKMAG  GG+   V N +V 
Sbjct: 375 GVKKRWGFAGQNASHGVEAKAHSSPGSIGQSKTVNVVWRFKKMAGHAGGDPRVV-NCKVF 433

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            ++ +R LI +KGCVPG  K S I + D+
Sbjct: 434 RIEAQRNLIFLKGCVPG-YKGSLIKISDA 461


>gi|327540578|gb|EGF27153.1| 50S ribosomal protein L3 [Rhodopirellula baltica WH47]
          Length = 217

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 77/219 (35%), Positives = 116/219 (52%), Gaps = 23/219 (10%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFS- 70
           MT ++  +G  +PVTV+    C V+  R+ D++GY AVQ+G  +   +   +  RG  + 
Sbjct: 1   MTQIFLEDGTAVPVTVVQAGPCHVLQVRSKDRDGYEAVQMGFEDKPRRLAKRSERGQVAT 60

Query: 71  ------------------SVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
                               +  P++ + EFR   + +   VG   +   F   + VD+T
Sbjct: 61  IESKRSKKRSAAGIEAPAKADCEPQRFVREFRGSSEAN---VGDTLTVEQFNDVKKVDIT 117

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G + G+GF+G MKRHNF G RATHGV   HR  G TG    P R FK K+MAG+ G  +V
Sbjct: 118 GTSKGRGFAGVMKRHNFAGQRATHGVKKCHRHAGGTGMSASPSRTFKGKRMAGQYGNAKV 177

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           T +NLEVV VD +  L++++G VPG     ++ +R + K
Sbjct: 178 TTRNLEVVRVDAENNLLMIRGAVPGPN-GGFVSIRQTNK 215


>gi|269215705|ref|ZP_06159559.1| 50S ribosomal protein L3 [Slackia exigua ATCC 700122]
 gi|269131192|gb|EEZ62267.1| 50S ribosomal protein L3 [Slackia exigua ATCC 700122]
          Length = 206

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 86/209 (41%), Positives = 117/209 (55%), Gaps = 3/209 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M + +  +KLGMT ++N   + +PVTV+  +   V   +T + +GY AVQ+G G  K K 
Sbjct: 1   MINAIYGKKLGMTQLFNENDQVVPVTVIVAEPNTVCQVKTKETDGYEAVQLGFGAIKAKK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V+KPM G F+   V P + L E RV+   D   VG   +   F   + V VTG +IGKGF
Sbjct: 61  VNKPMGGHFAKSGVEPTRHLREVRVESAAD-YKVGDTQTVEAFADVKKVHVTGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR +          +  HR+ GS G    P RVFK  +M G MG + VT KNLEVV
Sbjct: 120 QGVIKR-HGFAGGPGGHGAHFHRAPGSVGQCATPSRVFKGVRMPGHMGTDTVTTKNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            +D ++ LILVKG VPGA K   + VR +
Sbjct: 179 RIDAEQNLILVKGAVPGA-KGGIVRVRMA 206


>gi|327399523|ref|YP_004340392.1| 50S ribosomal protein L3 [Hippea maritima DSM 10411]
 gi|327182152|gb|AEA34333.1| 50S ribosomal protein L3 [Hippea maritima DSM 10411]
          Length = 206

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 99/203 (48%), Positives = 129/203 (63%), Gaps = 4/203 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++A+KLGMT +Y +EG+ IPVTVL      +   +T +K+GY A+QVG  + K K V+K
Sbjct: 3   GLIAKKLGMTQLY-VEGKAIPVTVLEAQEGVITDIKTKEKDGYNAIQVGFIDTKEKRVTK 61

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G +  V VSPKK L EFRV  D D   V        F  G++VDV G T G+GFSG 
Sbjct: 62  PLLGVYKKVGVSPKKILKEFRVD-DVDSFEVKGEVKVDIFQKGEIVDVIGHTKGRGFSGV 120

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF G    HG S+ +R  GS G  + PGRV K +KM G  G  RVT+KNLEVV VD
Sbjct: 121 MKRHNFAGGPDGHG-SMFNRRVGSIGNCEFPGRVVKGRKMPGHYGNERVTIKNLEVVFVD 179

Query: 184 DKRGLILVKGCVPGAKKNSWILV 206
            ++ LI +KG VPG+ K S++ +
Sbjct: 180 PEKKLIAIKGAVPGS-KGSYVNI 201


>gi|256371215|ref|YP_003109039.1| ribosomal protein L3 [Acidimicrobium ferrooxidans DSM 10331]
 gi|256007799|gb|ACU53366.1| ribosomal protein L3 [Acidimicrobium ferrooxidans DSM 10331]
          Length = 213

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 86/211 (40%), Positives = 118/211 (55%), Gaps = 2/211 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R   V  K+GMT V+    R +PVTV+ +    VV  +T +++GY AVQV  G  K + +
Sbjct: 3   RKTFVGEKVGMTQVWTEGDRAVPVTVIKVVPTWVVRTKTPERDGYEAVQVAVGRVKPQRL 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           S+P+ G F +  V    ++ E R+       P G          G  +DV G++ G GFS
Sbjct: 63  SRPVAGQFEARGVEAGARIMELRLDGASSFEP-GDQIGIEGIEPGMRLDVVGVSKGHGFS 121

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF G  A HG    HR+ GS G    P RVFK  +MAG+ G  RVT+ NLEVV 
Sbjct: 122 GGMKRHNFRGQGAAHGNHKKHRAPGSIGACATPARVFKGTRMAGQYGTERVTIHNLEVVR 181

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            + +R L+LVKG +PG  + + ++VRDS K 
Sbjct: 182 AEPERQLVLVKGSIPGP-RGAIVVVRDSVKG 211


>gi|256847763|ref|ZP_05553208.1| 50S ribosomal protein L3 [Lactobacillus coleohominis 101-4-CHN]
 gi|256715452|gb|EEU30428.1| 50S ribosomal protein L3 [Lactobacillus coleohominis 101-4-CHN]
          Length = 220

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 77/212 (36%), Positives = 121/212 (57%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT V+   G  +PVTV+ +    V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGKKVGMTQVFTDNGELVPVTVVDVTPNVVMQIKTVENDGYNAVQLGFDDKREIL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +K  +G  +  N +PK+ + E R  +  D + VG       F  G+ VDVTG+T G G+
Sbjct: 61  SNKAEQGHAAKANTAPKRFIGEIRDAELGDDIKVGDEVKADIFAEGETVDVTGITKGHGY 120

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G + +         HG S  HR  GS G       VFK KK+ GRMGGN  T+++L+VV
Sbjct: 121 QGNIHKDGQSRGPMAHG-SRYHRRPGSLGAI--INHVFKGKKLPGRMGGNTRTMQHLQVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD +  ++L+KG VPGA K S++ +++S K+
Sbjct: 178 KVDTENNVLLIKGNVPGANK-SYVTIKNSVKA 208


>gi|195952643|ref|YP_002120933.1| ribosomal protein L3 [Hydrogenobaculum sp. Y04AAS1]
 gi|226730524|sp|B4U744|RL3_HYDS0 RecName: Full=50S ribosomal protein L3
 gi|195932255|gb|ACG56955.1| ribosomal protein L3 [Hydrogenobaculum sp. Y04AAS1]
          Length = 232

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 86/207 (41%), Positives = 122/207 (58%), Gaps = 3/207 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +KLGM  V+  +G  IPVT + ++   VV  ++ + +GY A+QVG+   K     
Sbjct: 2   IGLIGKKLGMMRVFLNDGTAIPVTAIKVEPNYVVYIKSSETDGYNAIQVGSIPLKQSRFK 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KPM G F   N++P K L EFRV  D     +G       F+ G+LVD+ G + G+GF+G
Sbjct: 62  KPMVGHFKKANLTPLKYLKEFRVD-DVSSFALGQELGVDIFSPGELVDIVGRSKGRGFTG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKR +FGG   +HG    HR+ GS G R DPGRV+K+K+MAGR G   + V+ L VV V
Sbjct: 121 TMKRWDFGGFPKSHG-HRYHRAVGSVGNRTDPGRVWKSKRMAGRHGNETIRVQALVVVDV 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDS 209
              +G+ILV G VPG  K+  + +  S
Sbjct: 180 LKDKGIILVNGSVPG-HKDGIVYIEKS 205


>gi|223983921|ref|ZP_03634081.1| hypothetical protein HOLDEFILI_01362 [Holdemania filiformis DSM
           12042]
 gi|223964113|gb|EEF68465.1| hypothetical protein HOLDEFILI_01362 [Holdemania filiformis DSM
           12042]
          Length = 230

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 78/222 (35%), Positives = 125/222 (56%), Gaps = 5/222 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RKLGMT V+  +G  IPVTV+      V+  +TL+ +GY AVQ+G  +   K  +
Sbjct: 2   KGILGRKLGMTQVFTTDGVLIPVTVVEALPNVVLQKKTLENDGYEAVQLGFEDLSEKGSN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K  +G  +  + + K+ + E R  +  + L VG+      F  G++VDVTG + G+G++G
Sbjct: 62  KAEKGHAAKASTAAKRFVREIRGTEMTN-LEVGNEVKVDLFAAGEIVDVTGTSKGRGYNG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTG-CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            + R+N      THG S + R  GS     ++ GR+ K    AG+ GG   T +NLE++ 
Sbjct: 121 TIVRNNATMGPKTHGGSKNMRHIGSLATTGRNNGRIEKGTAGAGQEGGYTTTTQNLEIIK 180

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK--SAVNCKGKVS 221
           VD +   +L+KG VPG K+   ++V+ S K  +AV+ K  +S
Sbjct: 181 VDVENNYMLIKGNVPGPKRG-LVVVKSSVKGTAAVSAKDLIS 221


>gi|320526869|ref|ZP_08028059.1| 50S ribosomal protein L3 [Solobacterium moorei F0204]
 gi|320132837|gb|EFW25377.1| 50S ribosomal protein L3 [Solobacterium moorei F0204]
          Length = 253

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 114/211 (54%), Gaps = 4/211 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RKLGMT V+ IEG  IPVTV+ +    V+  +T + +GY AVQ+G  + K +  +
Sbjct: 2   KGILGRKLGMTQVFTIEGTLIPVTVIDVKPNVVLQKKTKEVDGYEAVQLGYEDVKEQRSN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G     N +PK  + E R  +  + L VG+      F  G +VDV G + GKG+SG
Sbjct: 62  KPAIGHAKKANTAPKHYIKELRADEMMN-LEVGAEVKADLFKAGDVVDVQGTSKGKGYSG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            + R+N      THG S  HR  GS      + G V K   M G+ G    T +NL +V 
Sbjct: 121 TIVRNNAARGPMTHG-SGHHRHIGSLATNGRNNGVVNKGTVMPGQEGVYTTTNQNLTIVK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VD + G ILVKG VPG +K   ++++ + K 
Sbjct: 180 VDAEEGYILVKGNVPGPRKG-LVVIKTTVKP 209


>gi|221488825|gb|EEE27039.1| 50S ribosomal protein L3, putative [Toxoplasma gondii GT1]
          Length = 514

 Score =  223 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 87/209 (41%), Positives = 122/209 (58%), Gaps = 4/209 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K+GM  +++  G R  VTV  +D C V+  RTLDK+GY A  +G G   +  V
Sbjct: 256 RTGLLAYKIGMMSLWDGWGERHAVTVCQVDRCVVMDQRTLDKDGYEACVMGIGYKPIHKV 315

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KPM G +    + PK ++ EF+   D  LLPVG   S  +FT GQ V V+G +  KG+ 
Sbjct: 316 TKPMLGVYIRSQIEPKSRIAEFKCSSD-CLLPVGHEMSVRHFTPGQQVFVSGWSKDKGYL 374

Query: 122 GAMKRHNFGGLRATHGVS-ISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           G  KR  F G  A+HGV   +H S GS G  +    V++ KKMAG  GG+   V N +V 
Sbjct: 375 GVKKRWGFAGQNASHGVEAKAHSSPGSIGQSKTVNVVWRFKKMAGHAGGDPRVV-NCKVF 433

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            ++ +R LI +KGCVPG  K S I + D+
Sbjct: 434 RIEAQRNLIFLKGCVPG-YKGSLIKISDA 461


>gi|294654997|ref|XP_002770064.1| DEHA2B02684p [Debaryomyces hansenii CBS767]
 gi|199429613|emb|CAG85072.4| DEHA2B02684p [Debaryomyces hansenii]
          Length = 278

 Score =  223 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 97/210 (46%), Positives = 138/210 (65%), Gaps = 2/210 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  K GM   Y  +G++   TV+ +DNC+V+ ++T+D +GY +V +G  + K+KN+
Sbjct: 61  RPGLLGVKRGMITWYTDDGKQFGATVIEIDNCEVIENKTVDTHGYTSVLLGQCD-KLKNI 119

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +      F    VSPKK + EFR++ +  L+PVG+  +  YF VGQLVDV  +T GKGF+
Sbjct: 120 TDKNLRKFQEAGVSPKKHIGEFRIRDESGLIPVGTELTADYFAVGQLVDVKAITKGKGFA 179

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F GL+A+HGVS +HRS GS G  Q PGRV   KKMAGRMGG   TV N EV+ 
Sbjct: 180 GVMKRHGFKGLKASHGVSKAHRSAGSMGATQTPGRVLPGKKMAGRMGGKSCTVFNNEVLH 239

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            D + G I++KG +PG  + S++ + D+ K
Sbjct: 240 ADAEAGFIVLKGQIPGPNR-SFVRISDAQK 268


>gi|296423844|ref|XP_002841462.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637702|emb|CAZ85653.1| unnamed protein product [Tuber melanosporum]
          Length = 306

 Score =  223 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 90/215 (41%), Positives = 129/215 (60%), Gaps = 2/215 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GV+A K GMT +Y   GRRI  TVL L+  QV   +T  K+GY AVQVG+G     NV
Sbjct: 76  RTGVLAVKKGMTAIYKPSGRRIACTVLQLERVQVTAVKTRQKHGYWAVQVGSGWRNSNNV 135

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           ++PM G F++  V+PK+ L EFRV+ +  L+  G+  S  +F  GQ VDV     G+GF+
Sbjct: 136 TRPMLGHFATAGVAPKEHLREFRVKDETGLMEPGTALSADFFVEGQYVDVRANCKGRGFA 195

Query: 122 GAMKRHNFGGLRATHGVSISHRSH-GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           G MKRH F G  A+HG S+SHR+   +   +    RV   K+M GRMGG+RVT  + +++
Sbjct: 196 GGMKRHGFSGQPASHGNSLSHRAMGSAGQSQGGGSRVLPGKRMPGRMGGHRVTRPHAQIM 255

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            ++ + G IL+ G VPG  K   + ++D+      
Sbjct: 256 EINKELGTILLFGPVPGP-KGCIVAIQDTILGPPP 289


>gi|299753327|ref|XP_001833202.2| ribosomal protein L3 [Coprinopsis cinerea okayama7#130]
 gi|298410250|gb|EAU88475.2| ribosomal protein L3 [Coprinopsis cinerea okayama7#130]
          Length = 257

 Score =  223 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 99/213 (46%), Positives = 132/213 (61%), Gaps = 5/213 (2%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVV-HRTLDKNG--YMAVQVGAGEAKVKNVSKPMRGF 68
           M  ++N +G + PVTVL LDNCQV    +T   +   Y AVQV + +   K  ++ M G 
Sbjct: 1   MAALWNDQGVKFPVTVLQLDNCQVTANIKTPRPDHTVYHAVQVASTDRPPKTTTRQMLGH 60

Query: 69  FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
           F+  NV PK+ + EF V  D   +PVG+  + ++F  GQ VDV   +IGKGF G MKR  
Sbjct: 61  FAKANVPPKRYVKEFPVTAD-AHVPVGTTLNAAHFVPGQYVDVVAKSIGKGFQGGMKRWG 119

Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188
           F GL A+HGVS+SHRS GS G  QDPGR++  KKMAGRMGGN+VTV+NL VV VD    L
Sbjct: 120 FHGLAASHGVSVSHRSSGSAGNSQDPGRIYPGKKMAGRMGGNQVTVQNLAVVRVDTALNL 179

Query: 189 ILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
           + V+G VPG   N+ + +RD+ K     +   +
Sbjct: 180 VYVRGAVPGVD-NAPVYIRDAKKVMAVARHNEA 211


>gi|50555650|ref|XP_505233.1| YALI0F10076p [Yarrowia lipolytica]
 gi|49651103|emb|CAG78040.1| YALI0F10076p [Yarrowia lipolytica]
          Length = 277

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 103/210 (49%), Positives = 140/210 (66%), Gaps = 3/210 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV--K 59
           R+G +A K GM   Y+  G  +P TVL +D CQVV H+T +K+GY AVQVG G      +
Sbjct: 48  RTGALAFKRGMISWYDENGVHMPATVLEIDLCQVVGHKTEEKHGYNAVQVGMGHRNKALQ 107

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            ++K   G FS+  V+PK+ + EFR++  D LLP+ +  + S+F VGQ VDV   + GKG
Sbjct: 108 KMNKSKLGQFSAATVNPKQAVAEFRIRGKDGLLPITTEITASHFKVGQYVDVQATSKGKG 167

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG MKRH F GL A+HGVS+ HRS G+TG   DPGRVF  +KMAG MG   VT+KN +V
Sbjct: 168 FSGVMKRHGFSGLPASHGVSLKHRSGGTTGQNTDPGRVFPGRKMAGNMGNETVTLKNQKV 227

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +SVD+  G+++VKG VPG+ K   + + D+
Sbjct: 228 LSVDEDTGIVIVKGMVPGS-KGKIVKLSDA 256


>gi|332170559|gb|AEE19814.1| 50S ribosomal protein L3 [Krokinobacter diaphorus 4H-3-7-5]
          Length = 203

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 79/206 (38%), Positives = 125/206 (60%), Gaps = 6/206 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ +K+GMT +++  G+ IP TV+    C +   RT + +GY A+Q+G  +AK  N  
Sbjct: 2   SGLIGKKVGMTSIFDENGKNIPCTVIEAGPCVITQVRTKEADGYEALQLGFDDAKKANK- 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
               G         K+K+ EF+  + +    +G   +  +F  G+ VDV+G + GKGF G
Sbjct: 61  -AAAGHAKKAGTVAKRKVVEFQGFEGE--FKLGDAITVDHFAEGEFVDVSGTSKGKGFQG 117

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH F G  +ATHG     R+ GS G    P RVFK  +MAGRMGG+++ V+NL+V+ 
Sbjct: 118 VVKRHGFRGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGDKIKVQNLKVLK 177

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           V  ++ L++VKGCVPG  KN++++++
Sbjct: 178 VVAEKNLLVVKGCVPG-HKNAYVIIQ 202


>gi|330837655|ref|YP_004412296.1| 50S ribosomal protein L3P [Spirochaeta coccoides DSM 17374]
 gi|329749558|gb|AEC02914.1| LSU ribosomal protein L3P [Spirochaeta coccoides DSM 17374]
          Length = 206

 Score =  222 bits (566), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 92/209 (44%), Positives = 122/209 (58%), Gaps = 5/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ EGR  PVTV+ ++   VV  RT +KNGY A  +GA + K   V+K
Sbjct: 3   GLIGKKIGMTQVFDAEGRLTPVTVIKIEGNVVVADRTEEKNGYNAALLGAIDKKKSRVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F    V+ K+ L EFR    D  + VG V     F     VDVTG T GKGF G 
Sbjct: 63  PYAGQFPE-GVAVKRNLVEFR--DFDKEVSVGEVLGVDLFKDIAFVDVTGTTKGKGFQGG 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G RA+HG S  HR  G T     P   FK  +MAG MG  R TV+NL VV VD
Sbjct: 120 MKRHGFAGGRASHG-SKFHRDIGGTAMSTTPAHTFKGHRMAGHMGFERTTVQNLRVVRVD 178

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           ++  +++VKG +PG  + S ++V+ + K 
Sbjct: 179 EELQVLMVKGAIPGPAQ-SVVIVKKAVKR 206


>gi|71018891|ref|XP_759676.1| hypothetical protein UM03529.1 [Ustilago maydis 521]
 gi|46099434|gb|EAK84667.1| hypothetical protein UM03529.1 [Ustilago maydis 521]
          Length = 373

 Score =  222 bits (566), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 100/218 (45%), Positives = 132/218 (60%), Gaps = 7/218 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG----YMAVQVGAGEAK 57
           R G++A K GMT  +   G RIP TVL + + QV  H     +     Y A+QV A + K
Sbjct: 92  RVGLIAVKRGMTSFFLPNGERIPATVLQVHSNQVSAHIGFGPDATESTYTALQVAAVDTK 151

Query: 58  V-KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116
              +V+K ++G      +   KK+        D L+P+G+  S  +F  GQ VDV  +T 
Sbjct: 152 STYHVTKQIQGHLKKAGIIKGKKIIREFPVSSDALVPLGTQLSAVHFVPGQSVDVRAITR 211

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV-TVK 175
           G+GF G MKRH F GLRA+HGVSISHRSHGSTG  QDPGRV+   KMAGRMGGN+  T+ 
Sbjct: 212 GRGFQGVMKRHGFHGLRASHGVSISHRSHGSTGANQDPGRVWPGTKMAGRMGGNKHGTIH 271

Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           NL VV VD ++ LI VKG VPG K  S + ++D+ + +
Sbjct: 272 NLLVVRVDAEKDLIYVKGNVPGPKGGS-VTLQDARRPS 308


>gi|225436243|ref|XP_002271466.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 281

 Score =  222 bits (566), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 82/209 (39%), Positives = 116/209 (55%), Gaps = 3/209 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
            GV+A KLGM   +  EG+ +PVTV+   +   V   +T   +GY AVQVG    + + +
Sbjct: 66  VGVMATKLGMMSYFEPEGKVVPVTVVGFREGNIVTQVKTEATDGYSAVQVGYRRVRDRKL 125

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G        P + L EFR+   D   P   +     F  G LVDV+G+TIGKGF 
Sbjct: 126 TKPEMGHLEKAGTIPMRHLQEFRLVSVDGFEPNQKLVFEELFKEGDLVDVSGITIGKGFQ 185

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNF     THG S SHR+ GS G    PG V+K KKM GRMGG +  ++ L++V 
Sbjct: 186 GGIKRHNFRRGPMTHG-SKSHRALGSIGAGTTPGHVYKGKKMPGRMGGTKTKIRKLKIVK 244

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           +D+   ++++KG VPG   N  + +  + 
Sbjct: 245 IDNDLRVVMIKGAVPGKPGN-LLRITPAK 272


>gi|307718206|ref|YP_003873738.1| 50S ribosomal protein L3 [Spirochaeta thermophila DSM 6192]
 gi|306531931|gb|ADN01465.1| 50S ribosomal protein L3 [Spirochaeta thermophila DSM 6192]
          Length = 208

 Score =  221 bits (565), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 91/210 (43%), Positives = 122/210 (58%), Gaps = 4/210 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            GV+ RKLGMT V++  G  +PVTV+ ++   VV  RT +++GY A+ +GA   K     
Sbjct: 2   VGVIGRKLGMTQVFDANGYVVPVTVIKVEKNTVVDVRTPERHGYRALVLGAFPLKASRAV 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    + PKK L E R  + D     G       F   + VDV G++ GKG+ G
Sbjct: 62  KPYLGQFQKRGLEPKKVLREIRDFEGD--YKPGDEIGVEIFEGVRFVDVRGLSKGKGYQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F G  A+HG S  HR+HGSTG    P +V K  KMAGRMGG +V V+NL +V V
Sbjct: 120 VMKRHGFSGGPASHG-SKFHRAHGSTGQSAYPSKVLKGTKMAGRMGGVQVCVQNLRIVEV 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +RG +LV+G VPG +K   ++V  + K 
Sbjct: 179 DKERGCLLVEGAVPGPRKG-VVIVTRAKKK 207


>gi|116199553|ref|XP_001225588.1| hypothetical protein CHGG_07932 [Chaetomium globosum CBS 148.51]
 gi|88179211|gb|EAQ86679.1| hypothetical protein CHGG_07932 [Chaetomium globosum CBS 148.51]
          Length = 380

 Score =  221 bits (565), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 101/218 (46%), Positives = 135/218 (61%), Gaps = 2/218 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+GV+A K GMT      G RI  TVL LD  Q V+++T  ++GY AVQVG GE    N
Sbjct: 86  LRAGVLAVKKGMTVFMGRTGARIACTVLQLDRVQTVLNKTRARHGYWAVQVGMGERNPGN 145

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V  P+ G++ +  ++PK+ L EFRV+    LLPVG    P +F VGQ VDV   + G GF
Sbjct: 146 VGAPLLGYYEAKGMAPKEVLAEFRVRDQSGLLPVGVQLMPDWFHVGQRVDVRSNSRGMGF 205

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179
           +G MKRH F G  A+HG S +HR+ GS G  Q  G RV   KKM GRMG  RVT++NL V
Sbjct: 206 AGGMKRHGFSGQEASHGNSKNHRTIGSAGPSQGSGSRVLPGKKMPGRMGNQRVTIQNLPV 265

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           +  D++ G+++VKGCV G  K + I V+D+ K     +
Sbjct: 266 LIADNELGILVVKGCVAGP-KGAVIQVQDACKKDPPPQ 302


>gi|108804974|ref|YP_644911.1| 50S ribosomal protein L3P [Rubrobacter xylanophilus DSM 9941]
 gi|123368030|sp|Q1AU29|RL3_RUBXD RecName: Full=50S ribosomal protein L3
 gi|108766217|gb|ABG05099.1| LSU ribosomal protein L3P [Rubrobacter xylanophilus DSM 9941]
          Length = 205

 Score =  221 bits (565), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 83/209 (39%), Positives = 114/209 (54%), Gaps = 6/209 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M + V ARK  MT  +  +G  + VTVL ++   V   +T +K+GY AVQVG G  K   
Sbjct: 1   MATAVFARKKYMTQAFQDDGTAVGVTVLEVEPNVVTAVKTAEKDGYEAVQVGFGAVKSGR 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V++P  G F+ +++ P++ L E R         VG       F  G  V V+  + G+GF
Sbjct: 61  VNRPHAGVFAKLDIPPRRYLRELRGVSG----EVGQTIGADAFEAGDRVHVSARSKGRGF 116

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KRH FG    THG     R  GS G   DP R+FK ++M G MG   VTV+NLEVV
Sbjct: 117 QGTVKRHGFGRGPVTHGSHNI-RQPGSVGASADPSRIFKGQRMPGHMGDRSVTVRNLEVV 175

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            VD +R  I V+G VPG  +N+ + VR +
Sbjct: 176 RVDAERNEIWVRGGVPGG-RNAIVKVRKA 203


>gi|225716532|gb|ACO14112.1| Mitochondrial 39S ribosomal protein L3 [Esox lucius]
          Length = 341

 Score =  221 bits (564), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 4/211 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59
           R G+VA KLGM  V+   G R  VT+L + +C V+ + + ++ +G+ A + VG   A   
Sbjct: 91  RVGLVAVKLGMAPVWTKMGDRQVVTLLQVQDCHVLKYLSKEEYDGHTAALLVGGKNASSF 150

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             S+     F    V PK+K+  F+V  D+ ++  G+    ++F  GQ VDVT  TIG G
Sbjct: 151 YKSQEEMEMFRFAGVPPKQKISTFKVS-DNAIIKPGTPLYAAHFRPGQYVDVTAKTIGMG 209

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR+ F G  ATHG + +HR  G++G   DP +VFK +KM GRMG    T   L+V
Sbjct: 210 FQGVMKRYGFKGQPATHGQTKTHRRPGASGPGGDPAKVFKGRKMPGRMGNVFDTAHGLKV 269

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
             V+ +  +I V G VPG  +N  + V DS 
Sbjct: 270 WRVNTRYNIIYVHGTVPG-HRNCILKVADSI 299


>gi|42526279|ref|NP_971377.1| 50S ribosomal protein L3 [Treponema denticola ATCC 35405]
 gi|81831476|sp|Q73PN1|RL3_TREDE RecName: Full=50S ribosomal protein L3
 gi|41816391|gb|AAS11258.1| ribosomal protein L3 [Treponema denticola ATCC 35405]
 gi|325473223|gb|EGC76418.1| 50S ribosomal protein L3 [Treponema denticola F0402]
          Length = 208

 Score =  221 bits (564), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 90/211 (42%), Positives = 130/211 (61%), Gaps = 5/211 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GMT ++N  G  +PVTV+ ++   VV  +  +K GY +V +G GE K K+ S
Sbjct: 2   IGLIGKKIGMTQIFNEVGHLMPVTVIQVEPNTVVALKDKEKFGYSSVVLGLGELKEKHTS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F S ++ P K L EFR    D  + VG       F     +D+T ++ GKGF G
Sbjct: 62  KPYAGQF-SGDIKPLKLLKEFR--DFDKEVAVGDKLGVEAFEKVSYLDITAISKGKGFQG 118

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKR  +GG RA+HG S  HR  GSTG    PGR FKN  M GRMG ++VTV+NL++V +
Sbjct: 119 VMKRWGYGGGRASHG-SKFHREAGSTGHCTTPGRSFKNTTMPGRMGFDKVTVQNLQIVKI 177

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           D + G+I+V+G VPG KK++ + ++ + K A
Sbjct: 178 DPELGVIMVRGSVPG-KKDATVFLKSAVKRA 207


>gi|291320506|ref|YP_003515770.1| 50S ribosomal protein L3 [Mycoplasma agalactiae]
 gi|290752841|emb|CBH40816.1| 50S ribosomal protein L3 [Mycoplasma agalactiae]
          Length = 267

 Score =  221 bits (564), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 81/212 (38%), Positives = 122/212 (57%), Gaps = 6/212 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT +Y   G+RIPVTV+ +    V    T++KNGY+A Q+   E K K V+
Sbjct: 2   KGILGRKVGMTQIYTELGQRIPVTVIEVKPNVVSKVLTVEKNGYVATQLATVEKKAKRVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +P+ G F     +PK+ + E R     +   +G   + S F+ G+LVD+TG++ GKGF+G
Sbjct: 62  RPLAGQFIQAKTTPKQYIKEIR---GMEGYELGQEVNASIFSAGELVDITGISKGKGFAG 118

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180
            +KR N      +HG     +    TG   D    RV K   M G +G  + TV+NLE+V
Sbjct: 119 TIKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVVKGMTMPGHLGSEKTTVQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD    L+LVKG +PGAKK S+++++ + K 
Sbjct: 179 KVDTVNNLLLVKGSIPGAKK-SFVIIKQAVKG 209


>gi|295099237|emb|CBK88326.1| LSU ribosomal protein L3P [Eubacterium cylindroides T2-87]
          Length = 231

 Score =  221 bits (564), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 82/222 (36%), Positives = 118/222 (53%), Gaps = 7/222 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RKLGMT V+  +G  IPVTV+      V+  +T   +GY AVQ+G  E K K  +
Sbjct: 2   KGLLGRKLGMTQVFTEDGVLIPVTVVEATPNVVLQKKTAQSDGYDAVQLGFEEIKEKRTT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G     N SPK+ + E  V+  D  + VG +   + F  G+ VDV G + GKG++G
Sbjct: 62  KANIGHCKKANTSPKRFIKE--VRNCDMEVNVGDLIDVTIFAAGETVDVIGTSKGKGYNG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGST---GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            + R+N      +HG S + R  GS    G     GR+ K   MAG+ GG   T  NL V
Sbjct: 120 TIVRNNAHQGPKSHGGSKNIRHIGSLATNGITSRQGRIMKGTIMAGQEGGYTTTNPNLTV 179

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
           + VD +   +L+KG VPG KK   ++VR + K++   K  V+
Sbjct: 180 IKVDKENNYLLIKGNVPGPKKG-LVMVRTA-KTSKGDKEPVT 219


>gi|157134546|ref|XP_001656360.1| Mitochondrial 39S ribosomal protein L3 [Aedes aegypti]
 gi|108870456|gb|EAT34681.1| Mitochondrial 39S ribosomal protein L3 [Aedes aegypti]
          Length = 372

 Score =  221 bits (563), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 70/230 (30%), Positives = 111/230 (48%), Gaps = 15/230 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH--------------RTLDKNGYM 47
           R+GV+ARK+G   ++  +G +I  T+L + +  VV +              +   KN Y 
Sbjct: 105 RTGVIARKIGQYPLWMKDGTKIRTTLLQVIDNHVVKYIPPAEFNPPLEPRQKKNWKNPYG 164

Query: 48  AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
            + VGA        +K   G F    V PK+ L  F V  +  LLP G+  + ++F VG 
Sbjct: 165 CLLVGAQSQDPSIFTKEYCGLFKDSGVLPKQHLCRFIVSPEAQLLP-GTPLNVTHFKVGD 223

Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
            VDV G T+  GF G +KRH F G+ A+HGV+ +HR  G+ G   +  RV+   KM G M
Sbjct: 224 YVDVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRKPGNIGAGGEKARVWPGTKMPGHM 283

Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           G     ++ L++  ++ K  ++ V+G       N  + + D+       K
Sbjct: 284 GNRWRNLRGLKIWRINTKYNVMWVQGSNIAGDTNGLVYIYDTILPLRKYK 333


>gi|224045473|ref|XP_002196500.1| PREDICTED: mitochondrial ribosomal protein L3 [Taeniopygia guttata]
          Length = 501

 Score =  221 bits (563), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 78/221 (35%), Positives = 114/221 (51%), Gaps = 5/221 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R GVVA KLGM  ++   G +  VT+L + +C V+ + + +++G    ++  G   V  
Sbjct: 249 IRVGVVAVKLGMMPIWTKSGEKHAVTLLKVQDCHVLRYVSKEESGAKTAKLLVGGKNVSP 308

Query: 61  VSKPMRGF--FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
            SKP      F    V  K+K+  F V  DD ++  G+    ++F  GQ VDVT  TIGK
Sbjct: 309 FSKPESAHEIFKEAGVPRKQKVTTFNVT-DDAIIKPGTPLYAAHFRPGQFVDVTAKTIGK 367

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G MKR  F G  A+HG + +HR  G+    +   +V++ KKM G+MG    T   L+
Sbjct: 368 GFQGVMKRWGFKGQPASHGQTKTHRRPGAISTNK-AAKVYRGKKMPGKMGNIYRTSFGLK 426

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           V  ++ K  +I V G VPG   N  + VRDS         K
Sbjct: 427 VWRINTKHDIIYVNGSVPG-HTNCLVKVRDSKLPTYKDCNK 466


>gi|85110563|ref|XP_963521.1| 60S ribosomal protein L3, mitochondrial precursor [Neurospora
           crassa OR74A]
 gi|28881355|emb|CAD70397.1| related to ribosomal protein L3 precursor, mitochondrial
           [Neurospora crassa]
 gi|28925204|gb|EAA34285.1| 60S ribosomal protein L3, mitochondrial precursor [Neurospora
           crassa OR74A]
          Length = 384

 Score =  221 bits (563), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 101/218 (46%), Positives = 138/218 (63%), Gaps = 2/218 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+GV+A K GMT      G RIP TVL LD  QVV ++T  KNGY AVQVG GE + +N
Sbjct: 106 LRTGVLAVKKGMTVFMGRTGARIPCTVLQLDRVQVVANKTRAKNGYWAVQVGLGERRAEN 165

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           V  P  G++ +  + PK+ L EF+V+  D LLPVG    P +F VGQ+VDV G+T G GF
Sbjct: 166 VGAPQLGYYEAKGIPPKQTLAEFKVRNQDGLLPVGVQLFPDWFHVGQVVDVRGITRGMGF 225

Query: 121 SGAMKRHNFGGLRATHGVSISHRSH-GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           +G MKRH F G  A+HG S++HR+     G +    RV   KKM GRMG  + TV+NL +
Sbjct: 226 AGGMKRHGFAGQEASHGNSLNHRTIGSVGGSQGSGSRVLPGKKMPGRMGAQQHTVQNLPI 285

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           + VD++ G+++VKG V G  K + + V+D+ K A   +
Sbjct: 286 LMVDNELGIVVVKGAVAG-HKGAVVKVQDAVKKAPPPE 322


>gi|295698649|ref|YP_003603304.1| ribosomal protein L3 [Candidatus Riesia pediculicola USDA]
 gi|291157291|gb|ADD79736.1| ribosomal protein L3 [Candidatus Riesia pediculicola USDA]
          Length = 208

 Score =  221 bits (563), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 85/208 (40%), Positives = 126/208 (60%), Gaps = 1/208 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GMT ++   G  IP+TV+ ++  +V     L KNGY +VQV +G  K K + 
Sbjct: 2   IGLIGKKIGMTRIFMKNGMAIPITVIQVEENRVTQVGILKKNGYRSVQVTSGIKKHKFLK 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
               GFF  + V P K L EF+    ++   +G     S+ +  + +D++  + GKGF G
Sbjct: 62  SSEIGFFKKIVVDPGKILKEFKTNATNENYHIGQKIHLSFLSKFKRIDISSFSKGKGFCG 121

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR NF    A+HG S+SHR  GS G  Q PGRVFK KKMAG MG  +VT+K LE++ +
Sbjct: 122 TIKRWNFKAQDASHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGHMGNKKVTMKKLEIIQI 181

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSF 210
           D+K+GLILVKG VPG   N  ++++ + 
Sbjct: 182 DEKKGLILVKGSVPGG-TNCNLIIKPTV 208


>gi|45644693|gb|AAS73081.1| predicted ribosomal protein L3 [uncultured marine gamma
           proteobacterium EBAC20E09]
          Length = 202

 Score =  221 bits (563), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 84/205 (40%), Positives = 122/205 (59%), Gaps = 3/205 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           M+ ++  +G  IPVT + +    V   +T + NGY AV + +   K+ N+SK    FF  
Sbjct: 1   MSRLFLEDGESIPVTAISVCGNFVADIKTKENNGYNAVVL-SKSKKINNLSKSQSEFFKK 59

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
            N++P   L EF+V+ D D   +G   +   F VGQ VD+TG + GKG++G +KRHNF  
Sbjct: 60  NNINPGS-LSEFKVENDIDTFEIGKHMTADVFEVGQFVDITGTSKGKGYAGVIKRHNFSM 118

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
             ATHG S++HR+HGS G  Q PGRV+K KKM+G MG  + TV+NL++V +D +  ++ V
Sbjct: 119 QDATHGNSLAHRAHGSIGQCQTPGRVWKGKKMSGHMGNVQKTVQNLKIVELDVENNVVYV 178

Query: 192 KGCVPGAKKNSWILVRDSFKSAVNC 216
           KG VPG    S I ++ S K     
Sbjct: 179 KGAVPGFN-GSEIKIKPSHKKTKQS 202


>gi|309777133|ref|ZP_07672096.1| 50S ribosomal protein L3 [Erysipelotrichaceae bacterium 3_1_53]
 gi|308915003|gb|EFP60780.1| 50S ribosomal protein L3 [Erysipelotrichaceae bacterium 3_1_53]
          Length = 228

 Score =  220 bits (562), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 79/219 (36%), Positives = 120/219 (54%), Gaps = 6/219 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RKLGMT V+  +G  IPVTV+      V+  +T++ +GY AVQ+G  + K    +
Sbjct: 2   KGILGRKLGMTQVFTEDGTLIPVTVVEACPNVVLQKKTVENDGYEAVQLGFEDVKETRST 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G  +  N +PK+ + E R  +  D L +G+  +   F+ G+ VDV G + GKGF+G
Sbjct: 62  KGEAGHAAKANTAPKRFVKEVRDSEFAD-LELGAEINVGIFSAGETVDVIGTSKGKGFNG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGST---GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            + R+N      +HG S  HR  GS    G     G++ K   MAG+ GG R T +NL V
Sbjct: 121 TIVRNNAKIGPKSHG-SGHHRHIGSLATNGITSRQGKIIKGTIMAGQEGGYRTTNQNLTV 179

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           + VD +   +L+KG VPG K+   ++VR +  S  N + 
Sbjct: 180 IKVDVENNYLLIKGNVPGPKRG-MVMVRTAKCSKGNTEP 217


>gi|116495947|ref|YP_807681.1| ribosomal protein L3 [Lactobacillus casei ATCC 334]
 gi|191639428|ref|YP_001988594.1| 50S ribosomal protein L3 [Lactobacillus casei BL23]
 gi|227533960|ref|ZP_03964009.1| ribosomal protein L3 [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|239630351|ref|ZP_04673382.1| 50S ribosomal protein L3 [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301067503|ref|YP_003789526.1| 50S ribosomal protein L3 [Lactobacillus casei str. Zhang]
 gi|122262653|sp|Q034Y3|RL3_LACC3 RecName: Full=50S ribosomal protein L3
 gi|226730526|sp|B3WAL7|RL3_LACCB RecName: Full=50S ribosomal protein L3
 gi|116106097|gb|ABJ71239.1| LSU ribosomal protein L3P [Lactobacillus casei ATCC 334]
 gi|190713730|emb|CAQ67736.1| 50S ribosomal protein L3 [Lactobacillus casei BL23]
 gi|227188337|gb|EEI68404.1| ribosomal protein L3 [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|239527963|gb|EEQ66964.1| 50S ribosomal protein L3 [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300439910|gb|ADK19676.1| Ribosomal protein L3 [Lactobacillus casei str. Zhang]
 gi|327383517|gb|AEA54993.1| 50S ribosomal protein L3 [Lactobacillus casei LC2W]
 gi|327386710|gb|AEA58184.1| 50S ribosomal protein L3 [Lactobacillus casei BD-II]
          Length = 210

 Score =  220 bits (562), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 76/212 (35%), Positives = 119/212 (56%), Gaps = 5/212 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ +K+GMT V+   G  +PVTV+ +    V+  +T++ +GY AVQ+G G+ +    
Sbjct: 3   RKGILGKKVGMTQVFTDNGELVPVTVVDVTPNVVMQVKTVESDGYEAVQLGYGDMREVLT 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G     + +PK+ + E R         +GS      F  G +VDVTG + G G+ 
Sbjct: 63  NKPSVGHAKKADTTPKRFVREIR-DVALSDYEIGSEVKADEFAAGDIVDVTGTSKGHGYQ 121

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +K+         HG S  HR  GS G      +VFK KK+ GRMG +  T++NL+VV+
Sbjct: 122 GNIKKDGQSRGPMAHG-SRYHRRPGSLGAI--INKVFKGKKLPGRMGNHTRTMQNLQVVA 178

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D +  ++L+KG VPGA K S++ +R + K+A
Sbjct: 179 ADTEHNVLLIKGNVPGANK-SFVTIRSAVKAA 209


>gi|312375540|gb|EFR22896.1| hypothetical protein AND_14042 [Anopheles darlingi]
          Length = 1032

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 15/232 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN--------------GYM 47
           R+GV+A+K+G   ++   G +I  T+L +   +VV +   ++                Y 
Sbjct: 759 RTGVIAKKIGQYPLWTRNGTKIRTTLLQIVENEVVKYIPPEEYRPAQEPRQRRNWRRPYG 818

Query: 48  AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
            + VGA        +K   G F    V PK+ L  F V  +   LP G+  +  +F VG 
Sbjct: 819 CLLVGAENGDPSLFTKEYAGLFQHTGVLPKQHLCRFLVSPE-AQLPPGTALTVDHFRVGD 877

Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
            VDV G T+ +GF G +KRH F G+  THGV+ +HR  G+ G      RV+   KM G M
Sbjct: 878 YVDVRGKTVDRGFQGVVKRHGFKGMPKTHGVTKTHRRPGNIGAGGQKARVWPGTKMPGHM 937

Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           G     ++ L+V+ ++ +  ++ V+        N  + V D+         K
Sbjct: 938 GNRWRVLRGLQVLRINRQYNVMWVRSSNIAGSTNGLVYVYDTVLPLRKHGAK 989


>gi|187918344|ref|YP_001883907.1| 50S ribosomal protein L3 [Borrelia hermsii DAH]
 gi|226725138|sp|B2S0I1|RL3_BORHD RecName: Full=50S ribosomal protein L3
 gi|119861192|gb|AAX16987.1| LSU ribosomal protein L3P [Borrelia hermsii DAH]
          Length = 209

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 134/212 (63%), Gaps = 6/212 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V+   G  +PVTV+  +   ++  +T++++GY A+ +G+ + K   +SK
Sbjct: 3   GLIGKKVGMTQVFQGNGVVVPVTVIEFEPNYIIGKKTVERDGYDALIMGSVDLKSSKISK 62

Query: 64  PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G + ++ NV PKK + EF+  K  D    G       F   + VD+TG T GKGF G
Sbjct: 63  PIKGQYKNLENVEPKKYVIEFKGLKGYDA---GDEVGLDAFKEIKYVDITGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  GSTG    P R FK  KMAGRMGG + T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGSTGQAATPSRTFKGTKMAGRMGGEQQTIQNLEVVFI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D+++  ILVKG VPG  K S+++V+ + K  V
Sbjct: 179 DEEKRAILVKGAVPGV-KGSFVIVKKAKKVGV 209


>gi|256370780|ref|YP_003108605.1| 50S ribosomal protein L3 [Candidatus Sulcia muelleri SMDSEM]
 gi|256009572|gb|ACU52932.1| 50S ribosomal subunit protein L3 [Candidatus Sulcia muelleri
           SMDSEM]
          Length = 205

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 128/207 (61%), Gaps = 5/207 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT  ++ +G ++P T++    C V+  +TL K+GY + Q+G  E K+K  +K
Sbjct: 3   GIIGKKIGMTSFFDEKGLKVPCTIIVAGPCLVLQKKTLKKDGYNSYQIGFEEKKIKKTNK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
            + G F     +PKKK+ EF ++K+   L  G +     F   +LVD+TG + GKGF G 
Sbjct: 63  SLLGNFKKFKSTPKKKIVEFSLKKE---LKSGDIIKVDIFNENELVDITGFSKGKGFQGV 119

Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +KRH F G    +HG    +R+ GS G   DP RVFK  +MAGRMG  +VT+K L+++ +
Sbjct: 120 IKRHGFSGVGEKSHGQHNRYRAPGSIGAGSDPSRVFKGTRMAGRMGNKKVTIKKLKILKI 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDS 209
           D  + L+++KG VPG  KNS++ ++ +
Sbjct: 180 DLLKNLLIIKGSVPG-TKNSFLKIKKT 205


>gi|7674308|sp|Q9ZI50|RL3_AQUPY RecName: Full=50S ribosomal protein L3
 gi|4165865|gb|AAD08785.1| ribosomal protein L3 [Aquifex pyrophilus]
          Length = 244

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 88/225 (39%), Positives = 128/225 (56%), Gaps = 7/225 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVK 59
           M  G++  K+GMT V   +G  IPVTV+      VV  ++++ K+GY A+QVGA EAK K
Sbjct: 1   MPLGLIGEKVGMTRVLLKDGTAIPVTVIKFPVNYVVQVKSVNTKDGYNALQVGAYEAKEK 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
           +++KP+ G F    V   ++L+EFRV   ++      +     F  G LVDV G++ G+G
Sbjct: 61  HLTKPLIGHFKKHGVPLLRRLWEFRVDNPEEFKSGQELRVQDVFKPGDLVDVWGISKGRG 120

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F+G MKR +F G   +HG    HR+ G+ G R DPGRV+K KKM G  G   V V+ L V
Sbjct: 121 FAGVMKRWDFAGFPRSHG-HRYHRAVGAIGQRTDPGRVWKGKKMPGHYGAKPVRVQGLFV 179

Query: 180 VSVDDKRGLILVKG-CVPGAKKNSWILV----RDSFKSAVNCKGK 219
           V+   +   ILVKG  +PG  K   +L+    R +++ +   K K
Sbjct: 180 VASLPEENAILVKGSALPGHNKGIVVLLPAVERIAYRKSQKLKQK 224


>gi|293363580|ref|ZP_06610336.1| 50S ribosomal protein L3 [Mycoplasma alligatoris A21JP2]
 gi|292552929|gb|EFF41683.1| 50S ribosomal protein L3 [Mycoplasma alligatoris A21JP2]
          Length = 277

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 81/212 (38%), Positives = 118/212 (55%), Gaps = 6/212 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT +Y   G R+ VTV+ +    V    + DKNGY+A Q+   + K    +
Sbjct: 2   KGILGRKVGMTQIYTELGTRVAVTVIEVQPNVVTKVLSSDKNGYVATQLAVFDKKASRSN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+  N +PK+ + E R   D     +G +   + F VG LVDVTG + GKGF+G
Sbjct: 62  KPETGHFAKANTTPKRYVKEVR---DMSGYELGQLVQANIFKVGDLVDVTGTSKGKGFAG 118

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180
            +KRHN      +HG     +    TG   D    +V K   M G++G  + TV+NLEVV
Sbjct: 119 TIKRHNQHIGPKSHGGGGGSQPVRQTGSLGDIAGNKVVKGMTMPGQLGNVKTTVQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD K  L+L+KG +PG KK S+++V++  K 
Sbjct: 179 KVDLKNNLLLIKGSIPGPKK-SFVMVKEGVKG 209


>gi|119953267|ref|YP_945476.1| 50S ribosomal protein L3 [Borrelia turicatae 91E135]
 gi|254803656|sp|A1QZR4|RL3_BORT9 RecName: Full=50S ribosomal protein L3
 gi|119862038|gb|AAX17806.1| LSU ribosomal protein L3P [Borrelia turicatae 91E135]
          Length = 209

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 90/212 (42%), Positives = 133/212 (62%), Gaps = 6/212 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V+   G  +PVTV+  +   V+  +T++++GY A+ +G+ + +   +SK
Sbjct: 3   GLIGKKVGMTQVFQGNGVVVPVTVIEFEPNYVIGKKTVERDGYDALIMGSVDLRSSKISK 62

Query: 64  PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P+RG + ++ NV PK+ + EF+  K  D    G       F   + VD+TG T GKGF G
Sbjct: 63  PIRGQYKNLENVEPKRYVIEFKGLKGYDA---GDEIGLDAFREIKYVDITGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRMGG + T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGEQQTIQNLEVVFI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D+++  ILVKG VPG  K S+++V+ + K  V
Sbjct: 179 DEEKRAILVKGAVPGV-KGSFVIVKKAKKVGV 209


>gi|148377809|ref|YP_001256685.1| 50S ribosomal protein L3 [Mycoplasma agalactiae PG2]
 gi|226730538|sp|A5IYY6|RL3_MYCAP RecName: Full=50S ribosomal protein L3
 gi|148291855|emb|CAL59245.1| 50S ribosomal protein L3 [Mycoplasma agalactiae PG2]
          Length = 267

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 81/212 (38%), Positives = 121/212 (57%), Gaps = 6/212 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT +Y   G+RIPVTV+ +    V    T++KNGY A Q+   E K K V+
Sbjct: 2   KGILGRKVGMTQIYTELGQRIPVTVVEVKPNVVSKVLTVEKNGYFATQLATVEKKAKRVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +P+ G F     +PK+ + E R     +   +G   + S F+ G+LVD+TG++ GKGF+G
Sbjct: 62  RPLAGQFIQAKTTPKQYIKEIR---GMEGYELGQEVNASIFSAGELVDITGISKGKGFAG 118

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180
            +KR N      +HG     +    TG   D    RV K   M G +G  + TV+NLE+V
Sbjct: 119 TIKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVVKGMTMPGHLGSEKTTVQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD    L+LVKG +PGAKK S+++++ + K 
Sbjct: 179 KVDTVNNLLLVKGSIPGAKK-SFVIIKQAVKG 209


>gi|313897304|ref|ZP_07830848.1| 50S ribosomal protein L3 [Clostridium sp. HGF2]
 gi|312958025|gb|EFR39649.1| 50S ribosomal protein L3 [Clostridium sp. HGF2]
          Length = 228

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 79/219 (36%), Positives = 119/219 (54%), Gaps = 6/219 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RKLGMT V+  +G  IPVTV+      V+  +T++ +GY AVQ+G  + K    +
Sbjct: 2   KGILGRKLGMTQVFTEDGTLIPVTVVEACPNVVLQKKTVENDGYEAVQLGFEDVKETRST 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G  +  N +PK+ + E R  +  D L +G+  +   F+ G+ VDV G + GKGF G
Sbjct: 62  KGEAGHAAKANTAPKRFVKEVRDSEFAD-LELGAEVNVGIFSAGETVDVIGTSKGKGFMG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGST---GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            + R+N      +HG S  HR  GS    G     G++ K   MAG+ GG R T +NL V
Sbjct: 121 TIVRNNAKIGPKSHG-SGHHRHIGSLATNGITSRQGKILKGTMMAGQEGGYRTTNQNLTV 179

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           + VD +   +L+KG VPG K+   ++VR +  S  N + 
Sbjct: 180 IKVDVENNYLLIKGNVPGPKRG-MVMVRTAKCSKGNTEP 217


>gi|260942335|ref|XP_002615466.1| hypothetical protein CLUG_04349 [Clavispora lusitaniae ATCC 42720]
 gi|238850756|gb|EEQ40220.1| hypothetical protein CLUG_04349 [Clavispora lusitaniae ATCC 42720]
          Length = 279

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 100/210 (47%), Positives = 137/210 (65%), Gaps = 2/210 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  K  M   +   G +   TV+ +D+C+V+ +++++K+GY AV +G  + K+KNV
Sbjct: 61  RPGLLGIKRDMITWFTESGEQFGATVIEVDSCEVIANKSVEKDGYSAVLMGQVD-KLKNV 119

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           S+      S   VSPK K  EFRV+ DD ++  G+  +  YF VGQLVDV  ++ GKGF+
Sbjct: 120 SRYHVKLCSDAGVSPKAKFGEFRVRTDDGIISPGTEITADYFAVGQLVDVKAVSKGKGFA 179

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F GLRATHGVS+SHRS GS G  QDPGRV   KKMAGRMGG   TV N EV+ 
Sbjct: 180 GVMKRHGFKGLRATHGVSVSHRSAGSMGATQDPGRVLPGKKMAGRMGGRNCTVFNNEVLH 239

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            D + G+++VKG +PG  K  ++ V D+ K
Sbjct: 240 ADGEAGILVVKGQIPGP-KGCFVKVADAKK 268


>gi|51209943|ref|YP_063607.1| ribosomal protein L3 [Gracilaria tenuistipitata var. liui]
 gi|68052932|sp|Q6B8V3|RK3_GRATL RecName: Full=50S ribosomal protein L3, chloroplastic
 gi|50657697|gb|AAT79682.1| 50S ribosomal protein L3 [Gracilaria tenuistipitata var. liui]
          Length = 205

 Score =  220 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 74/201 (36%), Positives = 121/201 (60%), Gaps = 2/201 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M+ G++ +K+GMT +++  G+ +PVT+L L  C +   + ++ +GY A+Q+G  +     
Sbjct: 1   MKIGLLGKKIGMTQIFDPGGKALPVTILKLGPCLITDIKKMESHGYAAIQIGYVKVNGNK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++K   G  +  N+   K L E++V   ++   +G   +    ++ Q + V+G +IGKGF
Sbjct: 61  LNKAQIGHLNKYNMPLVKFLKEYKVASTEN-YQIGKWITVEDLSINQNISVSGTSIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNF     +HG S +HR  GS G    PG+VF  KKMAGRMGG +VT++NL+++
Sbjct: 120 TGCIKRHNFSRGPMSHG-SKNHRQPGSIGAGTTPGKVFAGKKMAGRMGGKKVTIQNLKII 178

Query: 181 SVDDKRGLILVKGCVPGAKKN 201
            +     LI+VKG VPG   N
Sbjct: 179 DIKINNNLIIVKGSVPGKPGN 199


>gi|167975968|ref|ZP_02558245.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|195659702|gb|EDX53082.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
          Length = 226

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 78/206 (37%), Positives = 113/206 (54%), Gaps = 8/206 (3%)

Query: 9   KLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGF 68
           K+GMT V+   G+ +  TV++++  +V+  +T +K+GY A+Q+G    K K ++KP+ G 
Sbjct: 1   KVGMTQVFTETGKAVAATVIYVEPNKVLAVKTNEKDGYNAIQIGYETVKEKALNKPLLGQ 60

Query: 69  FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
           F   N  PK+ + EFR    D +  VG+  + S F  GQLV+    T G GF+G++KRHN
Sbjct: 61  FKKANSDPKRHIKEFR----DVVAEVGAELTVSEFEPGQLVNAQAYTKGHGFTGSIKRHN 116

Query: 129 FGGLRATHGVSISHRSHGSTG---CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           F      HG    HR  GS           RVFK  K+ G  G   VT KNL V+ V   
Sbjct: 117 FSMGPMGHGAGYPHRYVGSIAKGRGGSQAQRVFKGTKLPGHYGHELVTTKNLLVLDVKAN 176

Query: 186 RGLILVKGCVPGAKKNSWILVRDSFK 211
             LIL+KG +PG  K S +L++ + K
Sbjct: 177 ENLILIKGAIPGP-KGSIVLLKSAKK 201


>gi|189485085|ref|YP_001956026.1| 50S ribosomal protein L3 [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|212288415|sp|B1GZ83|RL3_UNCTG RecName: Full=50S ribosomal protein L3
 gi|170287044|dbj|BAG13565.1| 50S ribosomal protein L3 [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 227

 Score =  219 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 87/212 (41%), Positives = 128/212 (60%), Gaps = 3/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ +K+GMT V++++G  +PVTV+ + +C V   RT++KNGY AVQ+G GE K K 
Sbjct: 1   MLKFIIGKKIGMTQVFDVKGNLMPVTVVEVGHCVVTDVRTVEKNGYSAVQLGFGEIKEKG 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++K    FF   N+S K+ L EFRV +      VG       F  G  VDV+ +T GKG+
Sbjct: 61  LNKAQAVFFKRNNLSYKRTLKEFRVSE-VAGFSVGHEIKADAFKAGDYVDVSAVTKGKGY 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KRHNFG    +HG S   RS GS+G  Q P +V K  KM+G MG   VTV+ L +V
Sbjct: 120 AGVIKRHNFGMQPVSHGQSDRTRSRGSSGA-QGPQKVLKGLKMSGHMGNEYVTVQKLLIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +VD ++ ++L+KG VP A + +   +  + K 
Sbjct: 179 NVDAEKNVLLIKGSVPSANRGTL-FISSTLKK 209


>gi|313678365|ref|YP_004056105.1| 50S ribosomal protein L3 [Mycoplasma bovis PG45]
 gi|312950290|gb|ADR24885.1| ribosomal protein L3 [Mycoplasma bovis PG45]
          Length = 276

 Score =  219 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 79/212 (37%), Positives = 120/212 (56%), Gaps = 6/212 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT +Y   G+RIPVTV+ +    V    T+++NGY+A Q+   E K K V+
Sbjct: 2   KGILGRKVGMTQIYTELGQRIPVTVVEVKPNVVTKVLTVEQNGYVATQLATVEKKAKRVN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +P+ G F     +PK+ + E R  +      +G   + S F  G+LVD+TG + GKGF+G
Sbjct: 62  RPLAGQFIQAKTTPKQYIKEIRGMQG---YELGQEVNASIFEAGELVDITGTSKGKGFAG 118

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180
            +KR N      +HG     +    TG   D    RV K   M G +G  + TV+NLE+V
Sbjct: 119 TIKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVVKGMTMPGHLGSEKTTVQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD    ++LVKG +PGAKK S+++++ + K 
Sbjct: 179 KVDVANNILLVKGSIPGAKK-SFVIIKQAVKG 209


>gi|320108396|ref|YP_004183986.1| 50S ribosomal protein L3 [Terriglobus saanensis SP1PR4]
 gi|319926917|gb|ADV83992.1| 50S ribosomal protein L3 [Terriglobus saanensis SP1PR4]
          Length = 242

 Score =  219 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 72/220 (32%), Positives = 118/220 (53%), Gaps = 7/220 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVKNV 61
           +G++ RK+GMT V++  G   P+TV+    C +   +T+ K+GY A Q+G  E  K   +
Sbjct: 4   TGILGRKIGMTQVFDERGDVHPITVIKAGPCVITQLKTMQKDGYEAAQIGLVEFVKASKI 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQ---KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           +K M G F+  +V P K + E   +   + ++ +  G       F   + VDV G + G+
Sbjct: 64  NKAMTGHFAKSSVPPVKIIREVPFEASAEGEEAVKSGDRVLIDIFENAKFVDVIGTSKGR 123

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF+G ++RH FGG   +HG     +  GS G    P RVF  ++M G MG  ++TV+NL 
Sbjct: 124 GFAGVIRRHGFGGGPKSHGHMF--QVQGSIGASSFPSRVFPGQRMPGHMGAAQITVRNLR 181

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           +  +D +  LI+V+G VPG  ++  +LV  +       +G
Sbjct: 182 IRGIDLEDNLIMVEGAVPGP-RDGVVLVSRAKAPPRERRG 220


>gi|149018712|gb|EDL77353.1| mitochondrial ribosomal protein L3 (predicted), isoform CRA_b
           [Rattus norvegicus]
          Length = 304

 Score =  219 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 73/212 (34%), Positives = 112/212 (52%), Gaps = 7/212 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVKN 60
           R G++A KLGM  ++  +G++  VT+L + +C V+ +   +  NG  A  +  G      
Sbjct: 96  RVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKTA-ALTVGGKTGSR 154

Query: 61  VSKP--MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           + KP  +  F+  + + PK+ +  F V  D+ ++  G+    ++F  GQ VDVT  TIGK
Sbjct: 155 LYKPNSILEFYRDLGLPPKQTIKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGK 213

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G MKR  F G  A+HG + +HR  G+     D  RV+   KM G+MG    TV  L+
Sbjct: 214 GFQGVMKRWGFKGQPASHGQTKTHRRPGAI-STGDIARVWPGTKMPGQMGNQNRTVYGLK 272

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           V  V+ K  +I V G VPG  +N  + V  + 
Sbjct: 273 VWRVNTKHNIIYVNGSVPG-HRNCLVKVGTTV 303


>gi|325972661|ref|YP_004248852.1| 50S ribosomal protein L3 [Spirochaeta sp. Buddy]
 gi|324027899|gb|ADY14658.1| 50S ribosomal protein L3 [Spirochaeta sp. Buddy]
          Length = 206

 Score =  219 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 90/209 (43%), Positives = 127/209 (60%), Gaps = 5/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V++ +GR  PVTV+ ++   VV  RT +K+GY A  +G+ + K   ++K
Sbjct: 3   GLIGKKVGMTQVFDAQGRLTPVTVIKIEGNVVVGERTDEKHGYSAAVLGSVDKKKSTITK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+ V   PKK + EFR    D  L VG V     F     VDVTG T GKG++G 
Sbjct: 63  PYAGQFTDV-CEPKKHVIEFR--DFDKELTVGEVLGVDIFKDATFVDVTGTTKGKGYAGG 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KRH F G RATHG S  HR  G T     P R FK  +MAG MG  R+TV+NL+VV VD
Sbjct: 120 IKRHGFSGGRATHG-SKFHRDIGGTAMSSTPARTFKGHRMAGHMGNERMTVQNLKVVRVD 178

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           ++  +++VKG +PG  + S ++V+ + K 
Sbjct: 179 EEMQVLMVKGAIPGPAQ-SVVIVKKAIKK 206


>gi|126274899|ref|XP_001387659.1| predicted protein [Scheffersomyces stipitis CBS 6054]
 gi|126213529|gb|EAZ63636.1| predicted protein [Pichia stipitis CBS 6054]
          Length = 262

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 93/210 (44%), Positives = 136/210 (64%), Gaps = 2/210 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  K GM   +   G +   TV+ +D+C+V+  +T++ +GY +V +G  + K+KNV
Sbjct: 42  RPGLLGIKRGMISWFTEAGEQFAATVIEIDSCEVIKQKTVESDGYWSVLLGQID-KLKNV 100

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           ++     F +  VSPK+ + EFRV+    L+PVG+     YF+VGQLVD+  ++ GKGF+
Sbjct: 101 NEKELVKFEAAGVSPKQNIGEFRVRDKSGLIPVGTELKADYFSVGQLVDIKAVSKGKGFA 160

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH F GL A+HGVS+SHRS G  G  QDPGRV   KKMAGRMGG   TV N EV+ 
Sbjct: 161 GVMKRHGFKGLNASHGVSLSHRSAGGMGGNQDPGRVLPGKKMAGRMGGRNCTVFNNEVLH 220

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
            D + G+++VKG +PG  +  ++ + D+ K
Sbjct: 221 ADGEAGILVVKGQIPGPARG-FVKILDATK 249


>gi|330906708|ref|XP_003295571.1| hypothetical protein PTT_01689 [Pyrenophora teres f. teres 0-1]
 gi|311333041|gb|EFQ96334.1| hypothetical protein PTT_01689 [Pyrenophora teres f. teres 0-1]
          Length = 331

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 94/216 (43%), Positives = 136/216 (62%), Gaps = 4/216 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G++A K GMT +Y+   G+R   TVL +D  +VV H+  +KNGY AVQ+GAG+ + +
Sbjct: 84  LRTGLLAIKKGMTSMYDPETGKRAACTVLQVDRNEVVAHKRREKNGYWAVQIGAGQKEAR 143

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           NV++PM G F++  VSPK+ + EF V+ +  L + +G +   ++FT GQ VDV G   GK
Sbjct: 144 NVTRPMLGHFAAAGVSPKRWVAEFEVRDEAGLQVGIGEMVGANWFTKGQFVDVKGTNKGK 203

Query: 119 GFSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           GF+G MKRH FGG  A+HG S+ HR    + G +    RV   K+M G MG    TVKNL
Sbjct: 204 GFAGGMKRHGFGGQPASHGQSLMHRGMGSAGGSQGSGSRVLPGKRMPGNMGNQSCTVKNL 263

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           +V+ VD+  G+++V GCVPG   +  I V D+    
Sbjct: 264 KVLQVDEANGIVVVNGCVPGPN-DQIIRVSDALGKP 298


>gi|73667228|ref|YP_303244.1| 50S ribosomal protein L3 [Ehrlichia canis str. Jake]
 gi|109893428|sp|Q3YRK9|RL3_EHRCJ RecName: Full=50S ribosomal protein L3
 gi|72394369|gb|AAZ68646.1| LSU ribosomal protein L3P [Ehrlichia canis str. Jake]
          Length = 231

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 102/215 (47%), Positives = 147/215 (68%), Gaps = 5/215 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+   K+G T +++ EG+RIPVT+LHL +  ++  +T D NGY AV +G       N+
Sbjct: 4   RIGLFLEKVGHTAIFDNEGKRIPVTLLHLRDSFIISTKTKDINGYNAVVLGVE--SSVNI 61

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP        N++ K ++FE RV   D ++  G+  S ++F   Q +DVTG ++GKGF+
Sbjct: 62  KKPQLKILEKSNITAKCRIFESRVDNLDGIVK-GAKISITHFVENQYIDVTGYSLGKGFA 120

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF GL+A+HGVSI+HRS GSTG  QDPGRV+K KKMAG +G ++VTV+NL+V+ 
Sbjct: 121 GVMKRHNFKGLKASHGVSIAHRSQGSTGQCQDPGRVYKGKKMAGHLGSSKVTVQNLKVIL 180

Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVN 215
           VD +R L++VKG  +PGA K S++ V+D+ K +V 
Sbjct: 181 VDQERSLLVVKGNNIPGA-KGSYVFVKDAVKKSVP 214


>gi|118602213|ref|YP_903428.1| 50S ribosomal protein L3P [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|226730558|sp|A1AVK0|RL3_RUTMC RecName: Full=50S ribosomal protein L3
 gi|118567152|gb|ABL01957.1| LSU ribosomal protein L3P [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 238

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 94/225 (41%), Positives = 138/225 (61%), Gaps = 11/225 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG------ 54
           M  G+V +K+GMT + + +G   PV+V+ ++  ++V  +T+D NGY A+QV  G      
Sbjct: 1   MAMGLVGQKIGMTRLISDDGSITPVSVIKIELNRIVQTKTVDTNGYSAIQVTTGVKVNKK 60

Query: 55  -EAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113
            EAKV  V   ++G ++  +      L+EFRV+ D+  +   +    S F+ G  V+V G
Sbjct: 61  GEAKVHRVPAAIKGHYAKTSQEIGLGLWEFRVEADE--ITDATSVDISLFSAGHYVNVVG 118

Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
            + GKGF G +KRHNF    ATHG SISHR+ GSTG  Q+PGRVFK KKMAG MG  +VT
Sbjct: 119 RSKGKGFQGGVKRHNFQMQDATHGNSISHRAIGSTGQCQEPGRVFKGKKMAGHMGNEQVT 178

Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVR-DSFKSAVNCK 217
            + L++V VD +R +I VKG +PGA K  ++ +   S K+ +N +
Sbjct: 179 QECLKIVKVDSERNIIFVKGSIPGATKG-FVKISLSSKKNKINQE 222


>gi|56417003|ref|YP_154077.1| 50S ribosomal protein L3 [Anaplasma marginale str. St. Maries]
 gi|222475371|ref|YP_002563788.1| 50S ribosomal protein L3 (rplC) [Anaplasma marginale str. Florida]
 gi|254995180|ref|ZP_05277370.1| 50S ribosomal protein L3 [Anaplasma marginale str. Mississippi]
 gi|255003354|ref|ZP_05278318.1| 50S ribosomal protein L3 [Anaplasma marginale str. Puerto Rico]
 gi|255004478|ref|ZP_05279279.1| 50S ribosomal protein L3 [Anaplasma marginale str. Virginia]
 gi|56388235|gb|AAV86822.1| 50S ribosomal protein L3 [Anaplasma marginale str. St. Maries]
 gi|222419509|gb|ACM49532.1| 50S ribosomal protein L3 (rplC) [Anaplasma marginale str. Florida]
          Length = 232

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 106/220 (48%), Positives = 138/220 (62%), Gaps = 5/220 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ +K+G T V+   G R+PVT+L L++  VV  ++ D +GY AV +G    +   +
Sbjct: 6   RVGLLMKKVGSTAVFGDAGARVPVTLLLLEDTFVVDVKSRDVHGYNAVVLGV--RRPGRL 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP         +     LFE RV   D + P G V    +F  GQ VDV G +IG+GF+
Sbjct: 64  NKPQICALRKKGIDVDCHLFESRVDTVDGVEPGGRVL-VDHFFQGQFVDVAGRSIGRGFA 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNFGGLRA+HGVSISHRS GSTG  QDPGRVFK KKMAG MG     V+NL VV 
Sbjct: 123 GVMKRHNFGGLRASHGVSISHRSQGSTGQCQDPGRVFKGKKMAGHMGHTMSVVQNLRVVL 182

Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCKGKV 220
           VD +R L++V+G  VPG    S++LVRD+ K  V  +G V
Sbjct: 183 VDSERSLLVVEGTNVPGPC-GSYVLVRDAVKKPVPREGGV 221


>gi|325108615|ref|YP_004269683.1| 50S ribosomal protein L3P [Planctomyces brasiliensis DSM 5305]
 gi|324968883|gb|ADY59661.1| LSU ribosomal protein L3P [Planctomyces brasiliensis DSM 5305]
          Length = 231

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 89/230 (38%), Positives = 125/230 (54%), Gaps = 20/230 (8%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT VY   G  +PVTVL +  C V+  RTLD++GY AVQ+G G+   + 
Sbjct: 1   MPVGLLGRKVGMTQVYEEGGVVVPVTVLEVGPCPVLQVRTLDRDGYEAVQLGFGDKPRRL 60

Query: 61  VSKPMRGFFS-------------------SVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS 101
            ++  RG  +                     +  P++ + EFR   +   + VG V +  
Sbjct: 61  ATRGERGHVAEISSKRRKARQEAGVELLAKADCEPQRYVREFRTDGESLDIEVGKVLTVE 120

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F     VDV   + G+G +G MKRHNF G RA+HGV   HR+ GS G   DP RV K  
Sbjct: 121 QFAEISNVDVVATSKGRGTAGVMKRHNFAGQRASHGVKKVHRAPGSIGQSADPSRVLKGT 180

Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           +MAG+ G  RVTV+NL+V  +  +  L+LVKG VPG     ++LVR + K
Sbjct: 181 RMAGQYGNARVTVRNLKVARIVAEENLLLVKGAVPGPS-GGYVLVRPTNK 229


>gi|226321110|ref|ZP_03796652.1| ribosomal protein L3 [Borrelia burgdorferi 29805]
 gi|226233520|gb|EEH32259.1| ribosomal protein L3 [Borrelia burgdorferi 29805]
 gi|312149724|gb|ADQ29795.1| ribosomal protein L3 [Borrelia burgdorferi N40]
          Length = 206

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 91/209 (43%), Positives = 129/209 (61%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++   G  IPVTV+      ++  +T+D++GY A+  G+ + K   VSK
Sbjct: 3   GLIGKKVGMTQIFQKNGIVIPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKVSK 62

Query: 64  PMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G + S  ++ PK+ + E    K  D    G       F   + VDVTG T GKGF G
Sbjct: 63  PIKGQYKSLKDIEPKRYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRMGGN+ T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D+++  +LVKG VPGA K S+++V+ S K
Sbjct: 179 DEEKRALLVKGAVPGA-KGSFVVVKKSKK 206


>gi|219685094|ref|ZP_03539914.1| ribosomal protein L3 [Borrelia garinii Far04]
 gi|219673190|gb|EED30209.1| ribosomal protein L3 [Borrelia garinii Far04]
          Length = 206

 Score =  219 bits (558), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 93/209 (44%), Positives = 128/209 (61%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++   G  IPVTV+      ++  +T+D++GY A+  G+ + K   VSK
Sbjct: 3   GLIGKKVGMTQIFQKNGIVIPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKDSKVSK 62

Query: 64  PMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G + S  ++ PKK + E    K  D    G       F   + VDVTG T GKGF G
Sbjct: 63  PIKGQYKSLKDIEPKKYVIEL---KGLDGYDPGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRMGGN+ T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNKQTIQNLEVVLI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D++   ILVKG VPGA K S+++V+ S K
Sbjct: 179 DEENRAILVKGAVPGA-KGSFVVVKKSKK 206


>gi|312212003|emb|CBX92087.1| similar to 50S ribosomal protein L3 [Leptosphaeria maculans]
          Length = 328

 Score =  218 bits (557), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 104/219 (47%), Positives = 138/219 (63%), Gaps = 4/219 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G++A K GMT +Y+   G+R   TVL LD  +V+ H+  DKNGY AVQVGAGE   K
Sbjct: 82  LRTGLLANKKGMTAMYDPETGKRTACTVLQLDRNEVIAHKRRDKNGYWAVQVGAGEKLPK 141

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           NV+KPM G F+   VSPK+ + EF+V+ +  L +PVGS+    +F VGQ VDV G++ G 
Sbjct: 142 NVTKPMLGHFAGAAVSPKRWVAEFKVRDEAGLGVPVGSMVGAGWFNVGQWVDVKGISRGM 201

Query: 119 GFSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           GF+G MKRH FGG  A+HG S+ HR    + G +    RV   K+MAG MG   VTVKNL
Sbjct: 202 GFAGGMKRHGFGGQPASHGQSLMHRGMGSAGGSQGSGSRVLPGKRMAGNMGNESVTVKNL 261

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           +V+ VD   G+++V G VPG  KN  I V D+       
Sbjct: 262 KVLQVDAANGILVVTGAVPGP-KNQIIRVSDARDKPWPA 299


>gi|326922075|ref|XP_003207277.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like [Meleagris
           gallopavo]
          Length = 348

 Score =  218 bits (557), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 76/221 (34%), Positives = 112/221 (50%), Gaps = 5/221 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG--YMAVQVGAGEAKV 58
           +R GVVA KLGM  ++   G++  VT+L + +C V+ + + + +G     + VG      
Sbjct: 96  VRVGVVAVKLGMMPIWTKSGKKHAVTLLKVQDCHVLKYISKEDSGGKRAKLLVGGKNVSP 155

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
              S+     F    V  K+K+  F V  DD ++  G+    ++F  GQ+VDVT  TIGK
Sbjct: 156 FFKSEAEMEIFREAGVPRKQKVTSFDVT-DDAIIKPGTPLYAAHFRPGQIVDVTAKTIGK 214

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G +KR  F G  A+HG + +HR  G+    +   RVF  KKM G+MG    T   L+
Sbjct: 215 GFQGVVKRWGFKGQPASHGQTKTHRRPGAISTNK-VSRVFPGKKMPGKMGNIYRTSFALK 273

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           V  ++ K  +I V G VPG   N  + VRD+         K
Sbjct: 274 VWRINTKHDIIYVHGSVPG-HTNCLVKVRDTKLRVYKDCNK 313


>gi|240047259|ref|YP_002960647.1| 50S ribosomal protein L3 [Mycoplasma conjunctivae HRC/581]
 gi|239984831|emb|CAT04821.1| 50S ribosomal protein L3 [Mycoplasma conjunctivae]
          Length = 225

 Score =  218 bits (557), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 75/213 (35%), Positives = 116/213 (54%), Gaps = 6/213 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GMT ++   G  IPVTV+ +    V    T +KN Y A+Q+   + K    +
Sbjct: 2   KGILGKKVGMTQLFTDHGIAIPVTVIEVQPNIVTNVLTQEKNSYDAIQLSVFDKKASRFN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F   N +PKK + EFR   + D    G V   S F  G+ VDV G + GKGF+G
Sbjct: 62  KPELGHFQKANTTPKKFVKEFR---NFDGYKSGDVVDLSIFEAGEFVDVVGTSKGKGFAG 118

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180
            +KR+N      +HG     +    TG   D    +V K   M G +G  RVT++NLE++
Sbjct: 119 TIKRYNQAIGPRSHGGGGGSKPIRQTGSIGDISGNKVVKGMTMPGHLGHERVTLQNLEII 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            VD +  +++VKG +PG KK S+++++ + K +
Sbjct: 179 KVDVENSILVVKGSIPGPKK-SFVIIKSASKRS 210


>gi|15594823|ref|NP_212612.1| 50S ribosomal protein L3 [Borrelia burgdorferi B31]
 gi|195941615|ref|ZP_03086997.1| 50S ribosomal protein L3 [Borrelia burgdorferi 80a]
 gi|216264833|ref|ZP_03436825.1| ribosomal protein L3 [Borrelia burgdorferi 156a]
 gi|218249534|ref|YP_002374988.1| ribosomal protein L3 [Borrelia burgdorferi ZS7]
 gi|221218185|ref|ZP_03589651.1| ribosomal protein L3 [Borrelia burgdorferi 72a]
 gi|223888933|ref|ZP_03623524.1| ribosomal protein L3 [Borrelia burgdorferi 64b]
 gi|224532529|ref|ZP_03673154.1| ribosomal protein L3 [Borrelia burgdorferi WI91-23]
 gi|224533652|ref|ZP_03674241.1| ribosomal protein L3 [Borrelia burgdorferi CA-11.2a]
 gi|225549667|ref|ZP_03770633.1| ribosomal protein L3 [Borrelia burgdorferi 118a]
 gi|226321788|ref|ZP_03797314.1| ribosomal protein L3 [Borrelia burgdorferi Bol26]
 gi|226725136|sp|B7J243|RL3_BORBZ RecName: Full=50S ribosomal protein L3
 gi|2688413|gb|AAC66864.1| ribosomal protein L3 (rplC) [Borrelia burgdorferi B31]
 gi|215981306|gb|EEC22113.1| ribosomal protein L3 [Borrelia burgdorferi 156a]
 gi|218164722|gb|ACK74783.1| ribosomal protein L3 [Borrelia burgdorferi ZS7]
 gi|221192133|gb|EEE18354.1| ribosomal protein L3 [Borrelia burgdorferi 72a]
 gi|223885749|gb|EEF56848.1| ribosomal protein L3 [Borrelia burgdorferi 64b]
 gi|224512601|gb|EEF82977.1| ribosomal protein L3 [Borrelia burgdorferi WI91-23]
 gi|224513325|gb|EEF83687.1| ribosomal protein L3 [Borrelia burgdorferi CA-11.2a]
 gi|225369944|gb|EEG99391.1| ribosomal protein L3 [Borrelia burgdorferi 118a]
 gi|226232977|gb|EEH31730.1| ribosomal protein L3 [Borrelia burgdorferi Bol26]
 gi|312148184|gb|ADQ30843.1| ribosomal protein L3 [Borrelia burgdorferi JD1]
          Length = 206

 Score =  218 bits (557), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 90/209 (43%), Positives = 129/209 (61%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++   G  +PVTV+      ++  +T+D++GY A+  G+ + K   VSK
Sbjct: 3   GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKVSK 62

Query: 64  PMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G + S  ++ PK+ + E    K  D    G       F   + VDVTG T GKGF G
Sbjct: 63  PIKGQYKSLKDIEPKRYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRMGGN+ T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D+++  +LVKG VPGA K S+++V+ S K
Sbjct: 179 DEEKRALLVKGAVPGA-KGSFVVVKKSKK 206


>gi|269958584|ref|YP_003328371.1| 50S ribosomal protein L3 [Anaplasma centrale str. Israel]
 gi|269848413|gb|ACZ49057.1| 50S ribosomal protein L3 [Anaplasma centrale str. Israel]
          Length = 232

 Score =  218 bits (557), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 106/220 (48%), Positives = 138/220 (62%), Gaps = 5/220 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ +K+G T V+   G R+PVT+L L++  VV  +  D +GY AV +G    +   +
Sbjct: 6   RVGLLMKKIGNTAVFGDSGARVPVTLLLLEDTLVVEVKRRDVHGYDAVVLGV--RRPGRL 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP         +     LFE RV   D + P GS  S  +F  GQ VDV G +IG+GF+
Sbjct: 64  NKPQVCALRKKGIDVDCHLFESRVDAVDGIEP-GSRISVDHFFQGQFVDVAGRSIGRGFA 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF GLRA+HGVSISHRS GSTG  QDPGRVFK KKMAG MG +   V+NL VV 
Sbjct: 123 GVMKRHNFRGLRASHGVSISHRSQGSTGQCQDPGRVFKGKKMAGHMGCSMSVVQNLRVVL 182

Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCKGKV 220
           VD +R L++V+G  VPG+   S++LVRD+ K  V   G V
Sbjct: 183 VDSERSLLVVEGTNVPGSC-GSYVLVRDAVKKPVPGGGNV 221


>gi|319411891|emb|CBQ73934.1| related to MRPL9-mitochondrial ribosomal protein, large subunit
           [Sporisorium reilianum]
          Length = 378

 Score =  218 bits (557), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 101/218 (46%), Positives = 131/218 (60%), Gaps = 7/218 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG----YMAVQVGAGEAK 57
           R G++A K GMT  +   G RIP TVL +   QV  H     +     Y A+QV A + K
Sbjct: 97  RVGLIAVKRGMTSFFLPNGERIPATVLQVHTNQVSAHIGFGPDATESTYTALQVAAVDTK 156

Query: 58  VKN-VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116
             N V+K +RG   +  +S  KK+        D L+P+G+  S  +F  GQ +DV  +T 
Sbjct: 157 SINLVTKQIRGHLKTAGISRGKKIIREFRVSSDALVPLGTQLSAVHFVPGQSIDVRAITR 216

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV-TVK 175
           G GF G MKRH F GLRA+HGVSISHRSHGSTG  QDPGRV+   KMAGRMGGN+  ++ 
Sbjct: 217 GHGFQGVMKRHGFHGLRASHGVSISHRSHGSTGANQDPGRVWPGTKMAGRMGGNKHGSIH 276

Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           NL VV VD K+ LI VKG VPG  K   + ++D+ + +
Sbjct: 277 NLLVVRVDAKKDLIYVKGNVPGP-KGGNVTLQDARRPS 313


>gi|42524375|ref|NP_969755.1| 50S ribosomal protein L3 [Bdellovibrio bacteriovorus HD100]
 gi|81829166|sp|Q6MJ15|RL3_BDEBA RecName: Full=50S ribosomal protein L3
 gi|39576584|emb|CAE80748.1| 50S ribosomal protein L3 [Bdellovibrio bacteriovorus HD100]
          Length = 220

 Score =  218 bits (557), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 77/205 (37%), Positives = 107/205 (52%), Gaps = 1/205 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+ A K GM  +YN  G  +PVTVL  +   V   +T + +GY A+QV     K KN +K
Sbjct: 17  GLFAFKEGMATIYNENGEAVPVTVLRYEPWFVSQIKTNEADGYEAIQVACHPKKAKNSNK 76

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
             +G           +  +   Q   +   VG+  S      G  V +T  + GKGF+G+
Sbjct: 77  AEKGHLEKAGFENGAQFVKELRQAAPEGTVVGAQISIDSLAKGDFVKITSKSKGKGFAGS 136

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR  F G  A+HG S  HR  GS+G R  PGRV   KK  G +G   VTVKN+EVV + 
Sbjct: 137 VKRWGFAGGPASHG-SKFHRRPGSSGNRTWPGRVMPGKKFPGHLGAETVTVKNVEVVQII 195

Query: 184 DKRGLILVKGCVPGAKKNSWILVRD 208
            +  +++VKG VPGA+     LVR+
Sbjct: 196 AEENVLMVKGPVPGARNTLVKLVRE 220


>gi|203284388|ref|YP_002222128.1| 50S ribosomal protein L3 [Borrelia duttonii Ly]
 gi|203287922|ref|YP_002222937.1| 50S ribosomal protein L3 [Borrelia recurrentis A1]
 gi|226725137|sp|B5RM36|RL3_BORDL RecName: Full=50S ribosomal protein L3
 gi|226725139|sp|B5RPI2|RL3_BORRA RecName: Full=50S ribosomal protein L3
 gi|201083831|gb|ACH93422.1| 50S ribosomal protein L3 [Borrelia duttonii Ly]
 gi|201085142|gb|ACH94716.1| 50S ribosomal protein L3 [Borrelia recurrentis A1]
          Length = 209

 Score =  218 bits (557), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 87/212 (41%), Positives = 132/212 (62%), Gaps = 6/212 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V+   G  +PVTV+  +   V+  +T++++GY A+ +G+ + K   VS+
Sbjct: 3   GLIGKKVGMTQVFQSNGIVVPVTVIEFEPNYVIGKKTMERDGYDALIMGSVDLKGSKVSR 62

Query: 64  PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G +  + N+ PK+ + EF+  K  D    G       F   + VD+TG T GKGF G
Sbjct: 63  PIKGQYKKLENIEPKRYVIEFKGLKGYDA---GDEVGLDAFREIKYVDITGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRMGG + T++NLE+V +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGEQQTIQNLEIVFI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           D+++  ILVKG VPG  K S+++V+ + K  +
Sbjct: 179 DEEKRAILVKGAVPGV-KGSFVIVKKAKKVGI 209


>gi|189195810|ref|XP_001934243.1| 50S ribosomal protein L3 [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187980122|gb|EDU46748.1| 50S ribosomal protein L3 [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 332

 Score =  218 bits (556), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 94/216 (43%), Positives = 136/216 (62%), Gaps = 4/216 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G++A K GMT +Y+   G+R   TVL +D  +VV H+  +KNGY AVQ+GAG+ + +
Sbjct: 84  LRTGLLAIKKGMTSMYDPETGKRAACTVLQVDRNEVVAHKRREKNGYWAVQIGAGQKEAR 143

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
           NV++PM G F++  VSPK+ + EF V+ +  L + +G +   ++FT GQ VDV G   GK
Sbjct: 144 NVTRPMLGHFAAAGVSPKRWVAEFEVRDEAGLQVGIGEMVGANWFTQGQFVDVKGTNKGK 203

Query: 119 GFSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           GF+G MKRH FGG  A+HG S+ HR    + G +    RV   K+M G MG    TVKNL
Sbjct: 204 GFAGGMKRHGFGGQPASHGQSLMHRGMGSAGGSQGSGSRVLPGKRMPGNMGNQSCTVKNL 263

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           +V+ VD+  G+++V GCVPG   +  I V D+    
Sbjct: 264 KVLQVDEANGIVVVGGCVPGPN-DQIIRVSDALGKP 298


>gi|254796647|ref|YP_003081483.1| ribosomal protein L3 [Neorickettsia risticii str. Illinois]
 gi|254589884|gb|ACT69246.1| ribosomal protein L3 [Neorickettsia risticii str. Illinois]
          Length = 210

 Score =  218 bits (555), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 97/212 (45%), Positives = 132/212 (62%), Gaps = 7/212 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ +K+G T VY+     +PVT+L L+   V+     +++G +  +V  G  K   +
Sbjct: 3   RVGLLLKKVGCTSVYDDRSSLVPVTLLQLEENVVLSA--EERDGVVVTRVSFGTRK---L 57

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP   +   + +    ++ EFRV       P+GS  +  +F  GQ VD  G +IGKGF+
Sbjct: 58  KKPQLAYLRKLGLEKGGRVVEFRVSPRFVPEPLGS-LTVEHFRPGQYVDAVGTSIGKGFA 116

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF GLRA+HGVSISHRS GSTG  QDPG+VFK KKMAG MG  RVT++NL V  
Sbjct: 117 GVMKRHNFAGLRASHGVSISHRSGGSTGQCQDPGKVFKGKKMAGHMGNARVTMQNLLVQL 176

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           VD +  LI V+G VPG  KNS++L+RD+ K  
Sbjct: 177 VDVENCLIGVRGSVPGC-KNSYVLLRDALKKG 207


>gi|320538165|ref|ZP_08038060.1| 50S ribosomal protein L3 [Treponema phagedenis F0421]
 gi|320144982|gb|EFW36703.1| 50S ribosomal protein L3 [Treponema phagedenis F0421]
          Length = 207

 Score =  218 bits (555), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 88/210 (41%), Positives = 127/210 (60%), Gaps = 6/210 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GMT V+N +G  +PVTV+ ++   VV  +  +K GY AV +G GE K K+ +
Sbjct: 2   VGLIGKKIGMTQVFNEQGHLMPVTVIQVEPNTVVALKDEEKFGYSAVVLGLGEMKEKHAA 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F   ++ P K L EFR    D  + VG           + +DVT ++ GKGF G
Sbjct: 62  KPYAGQF--ADMKPVKLLKEFRGF--DKEVSVGEKIGVEILDTTRYLDVTAVSKGKGFQG 117

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR  FGG RA+HG S  HR  GSTG    PGR FKN KM GRMG  +VTV+NL +  +
Sbjct: 118 VVKRWGFGGGRASHG-SKFHREAGSTGQCTSPGRSFKNVKMPGRMGAEKVTVQNLRIEKI 176

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D + G+++V+G VPG KK++ + ++ + K 
Sbjct: 177 DPEMGVVMVRGSVPG-KKDATVFLKSAVKR 205


>gi|193216762|ref|YP_002000004.1| 50S ribosomal protein L3 [Mycoplasma arthritidis 158L3-1]
 gi|226730537|sp|B3PMP8|RL3_MYCA5 RecName: Full=50S ribosomal protein L3
 gi|193002085|gb|ACF07300.1| ribosomal protein L3 [Mycoplasma arthritidis 158L3-1]
          Length = 272

 Score =  218 bits (555), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 68/218 (31%), Positives = 116/218 (53%), Gaps = 6/218 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT ++  EG  IPVT++ +    V    T++K+GY A Q+   + K   + 
Sbjct: 2   KGILGRKVGMTQLFTNEGILIPVTIVEVKPNVVTKVLTVEKDGYSATQLATEDKKASQIR 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +P    F   N +PK+ + E R   +     +G     S F  G++VDVT ++ GKGF+G
Sbjct: 62  RPEINKFKQANTTPKRFVKEIR---NMTGYSLGDTIDASLFQAGEIVDVTAISKGKGFAG 118

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180
            +KR N      +HG     +    TG   D    RV+K   M G +G  +VT++NLE+V
Sbjct: 119 TIKRWNQHIGPKSHGGGGGSQPLRQTGSIGDISGNRVWKGMTMPGHLGSEQVTIQNLEIV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
             D    ++++KG +PGA K + ++++ + K++   + 
Sbjct: 179 KEDPANNMLVIKGSIPGA-KGALVVIKKAIKTSHKKEA 215


>gi|158296418|ref|XP_316827.4| AGAP000857-PA [Anopheles gambiae str. PEST]
 gi|157015287|gb|EAA12062.4| AGAP000857-PA [Anopheles gambiae str. PEST]
          Length = 373

 Score =  217 bits (554), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 64/232 (27%), Positives = 111/232 (47%), Gaps = 15/232 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN--------------GYM 47
           R+GV+A+K+G   ++  +G++I  T+L + + +VV +   ++                Y 
Sbjct: 100 RTGVIAKKIGQYPLWTKDGQKIRTTLLQIVDNEVVKYIPPEEYRPAQEPRQSRNWRKPYG 159

Query: 48  AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
            + VGA        +K   G F    V PKK L  F V  +   LP G+  + S+F VG 
Sbjct: 160 CLLVGAEHGDPSLFTKEYAGLFHESGVLPKKHLCRFIVSPE-AQLPSGTALTVSHFRVGD 218

Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
            VDV G+T+ +GF G +KRH F G+  +HGV+ +HR  G+ G   +  RV+   ++ G M
Sbjct: 219 FVDVRGLTVDRGFQGVVKRHGFKGMPKSHGVTKTHRRPGNIGAGGNKARVWPGTRLPGHM 278

Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           G     ++ L ++ ++ +  ++ V G       N  + + D+         K
Sbjct: 279 GNRWRVLRGLRILRINPQYNVMWVMGSNIAGNTNGIVYIYDTILPLRRHGAK 330


>gi|206896345|ref|YP_002247334.1| ribosomal protein L3 [Coprothermobacter proteolyticus DSM 5265]
 gi|206738962|gb|ACI18040.1| ribosomal protein L3 [Coprothermobacter proteolyticus DSM 5265]
          Length = 219

 Score =  217 bits (554), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 76/208 (36%), Positives = 114/208 (54%), Gaps = 3/208 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GM+   + +G  IPVT++      VV  +  D  G  +V +G    K K ++
Sbjct: 4   IGLLGKKIGMSRFIDEKGVFIPVTLIKAGPNYVVNVK-KDSKGRESVALGFEVVKEKALN 62

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121
           KP  G      V P + + EFR     +   VG   +    F  G+LVDV G + G+GF+
Sbjct: 63  KPQLGVLKKAGVPPVRFVREFRYPGISEKFEVGQEVNVADVFADGELVDVIGTSKGRGFA 122

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           GAMKR  F G   THG    HR  G+ G R  PG V   KKM+G  G ++VTV+NL++V 
Sbjct: 123 GAMKRWGFAGGPKTHGTRGWHRRVGAIGNRTYPGEVKPGKKMSGHYGNSQVTVRNLKIVK 182

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
           V  ++ +I VKG VPG+ +N ++ +R +
Sbjct: 183 VIPEQNIIAVKGSVPGS-RNGFVCIRKA 209


>gi|189501654|ref|YP_001957371.1| 50S ribosomal protein L3 [Candidatus Amoebophilus asiaticus 5a2]
 gi|226725126|sp|B3EUM3|RL3_AMOA5 RecName: Full=50S ribosomal protein L3
 gi|189497095|gb|ACE05642.1| hypothetical protein Aasi_0197 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 210

 Score =  217 bits (554), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 78/208 (37%), Positives = 117/208 (56%), Gaps = 4/208 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +KLGMT +Y+  GR +P TV+    C V   + ++K+GY AVQ+G  + K KN  K
Sbjct: 3   GIIGKKLGMTTLYDEAGRSVPCTVITGGPCVVTQIKNIEKDGYTAVQLGYDDKKEKNTVK 62

Query: 64  PMRGFFSSVNVSPKKKLFEF--RVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGF 120
           P+ G F     +PK+KL EF    ++    + +G        F  G+ VD  G++ GKGF
Sbjct: 63  PLMGHFQKAQTTPKRKLVEFKEFGKELGKEIQLGQTIQLHDIFVEGEYVDAIGLSKGKGF 122

Query: 121 SGAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            G +KRH F G    +HG     R+ G+ G    P RVFK  +MAGR GG RV + NL +
Sbjct: 123 QGVVKRHGFSGVGGKSHGQHNRERAPGAIGACSTPSRVFKGMRMAGRTGGQRVKITNLRI 182

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVR 207
           + +  ++ ++++ G VPGAK    IL +
Sbjct: 183 MKLVPEKNILVISGSVPGAKNGYIILEK 210


>gi|255994807|ref|ZP_05427942.1| 50S ribosomal protein L3 [Eubacterium saphenum ATCC 49989]
 gi|255993520|gb|EEU03609.1| 50S ribosomal protein L3 [Eubacterium saphenum ATCC 49989]
          Length = 315

 Score =  217 bits (553), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 80/217 (36%), Positives = 115/217 (52%), Gaps = 3/217 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           +  +K GMT ++  +G  IPVTV+     +VV  +T   +GY AV+V   E K   ++KP
Sbjct: 14  IFGKKAGMTQIFTEDGVSIPVTVIEAYPAKVVQIKTQATDGYDAVKVAYIETKEHRINKP 73

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
            +G          +K+ EF  +   +   VG V + S  + G  VDVTG + GKG +G +
Sbjct: 74  KKGELDKAKAGAMRKMAEFTPENGVE-YKVGDVITVSELSEGNKVDVTGTSKGKGTAGNI 132

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KRH       +HG S   R  G+      PGRVFK  K  G MG  +VTV+NL++V + +
Sbjct: 133 KRHGHRRGPMSHG-SKHKRLAGALAGAAYPGRVFKGNKGPGHMGDEQVTVQNLDLVKLIE 191

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
            R ++LVKG VPG KK   ++V  S KS     GK +
Sbjct: 192 DRNVLLVKGAVPG-KKGGEVMVTYSKKSEYVLSGKAA 227


>gi|225548727|ref|ZP_03769774.1| ribosomal protein L3 [Borrelia burgdorferi 94a]
 gi|225370757|gb|EEH00193.1| ribosomal protein L3 [Borrelia burgdorferi 94a]
          Length = 206

 Score =  217 bits (553), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 90/209 (43%), Positives = 129/209 (61%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++   G  +PVTV+      ++  +T+D++GY A+  G+ + K   VSK
Sbjct: 3   GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKVSK 62

Query: 64  PMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G + S  ++ PK+ + E    K  D    G       F   + VDVTG T GKGF G
Sbjct: 63  PIKGQYKSLKDIEPKRCVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRMGGN+ T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D+++  +LVKG VPGA K S+++V+ S K
Sbjct: 179 DEEKRALLVKGAVPGA-KGSFVVVKKSKK 206


>gi|153004713|ref|YP_001379038.1| 50S ribosomal protein L3 [Anaeromyxobacter sp. Fw109-5]
 gi|166233114|sp|A7HBF8|RL3_ANADF RecName: Full=50S ribosomal protein L3
 gi|152028286|gb|ABS26054.1| ribosomal protein L3 [Anaeromyxobacter sp. Fw109-5]
          Length = 236

 Score =  217 bits (553), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 83/224 (37%), Positives = 119/224 (53%), Gaps = 8/224 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58
           M +G++A+KLGMT ++  EG  IPVTVL    C VV  +T +K+GY AV +G GE     
Sbjct: 1   MATGLLAKKLGMTQIFTAEGDCIPVTVLEAGPCTVVRRKTAEKDGYDAVVIGWGEVDEKH 60

Query: 59  -KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPS-YFTVGQLVDVTGM 114
              ++KP  G F        + + E RV+       L  G V +    F   Q +DV G+
Sbjct: 61  AHRLTKPEVGVFKKAGTPVFRHVKEIRVKDAKLLGELKAGDVLTVDKVFKQDQRIDVAGV 120

Query: 115 TIGKGFSGAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
           T G+GF+G MKR N  G  R +      HR  G+ G R+ PG+V+K K + G  G + VT
Sbjct: 121 TKGRGFTGVMKRWNMHGAARDSSTTHEHHRHVGAIGQRKTPGKVWKGKHLPGHYGVDNVT 180

Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           ++NL +V V+  + L+LVKG VPG   +  + V  + K     K
Sbjct: 181 IQNLTIVGVEADKNLLLVKGAVPG-HNDGLLFVNTAVKGQPRVK 223


>gi|241957878|ref|XP_002421658.1| 60s ribosomal protein, mitochondrial precursor, putative [Candida
           dubliniensis CD36]
 gi|223645003|emb|CAX39595.1| 60s ribosomal protein, mitochondrial precursor, putative [Candida
           dubliniensis CD36]
          Length = 293

 Score =  217 bits (553), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 101/220 (45%), Positives = 134/220 (60%), Gaps = 6/220 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+ A K GM   +N +G  IP TVL +D+C+V+ ++     GY AV +G  +      
Sbjct: 67  RPGLFAIKRGMITWFNEKGEHIPATVLEVDSCEVLGYKLFRDFGYTAVIMGTIDKLKNVK 126

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDD-----LLPVGSVFSPSYFTVGQLVDVTGMTI 116
           S      F +  VSPK+K+ EF+++  D+     L+PVG+  +  YFTVGQ VDV G+T 
Sbjct: 127 STNDLRIFETAKVSPKQKIGEFKIRSIDNDIESKLIPVGTELTADYFTVGQKVDVKGITK 186

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           GKGF+G MKR  F G RATHG S +HR+ G+TG  Q+PGRVF  KKM GRMG    T  N
Sbjct: 187 GKGFAGVMKRWGFSGGRATHGTSKAHRTPGATGGNQNPGRVFPGKKMPGRMGNRNNTGFN 246

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           LEV+  D + G+++VKG VPG KK S I V D+ K   N 
Sbjct: 247 LEVLHTDGEAGILIVKGNVPGPKK-SIIKVYDAIKEYGNS 285


>gi|313123111|ref|YP_004033370.1| 50S ribosomal protein l3 [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312279674|gb|ADQ60393.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 198

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 75/202 (37%), Positives = 112/202 (55%), Gaps = 5/202 (2%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT ++  +G  +PVTV+      V+  +T++ +GY AVQ+G  + +    +KP +G    
Sbjct: 1   MTQIFTKDGVLVPVTVIEATPNVVMQVKTVENDGYEAVQLGYQDKREVLSNKPEKGHADK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
              SPK+ + E R  +  D   VGS  +   F  G +V+VTG + G G+ G +KRH+   
Sbjct: 61  AKTSPKRFIRELRGVELSD-YEVGSEVTVETFKEGDVVNVTGTSRGHGYQGNIKRHHQSR 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
              THG S  HR  GS G      RV K KK+ G MG   VT++NL V  V   + ++++
Sbjct: 120 GPETHG-SRYHRIPGSMGSI--INRVPKGKKLPGHMGVKTVTIENLVVEKVVADKNVLMI 176

Query: 192 KGCVPGAKKNSWILVRDSFKSA 213
           KG VPGA KNS I+V+ S K++
Sbjct: 177 KGNVPGA-KNSLIVVKSSAKAS 197


>gi|304373190|ref|YP_003856399.1| 50S ribosomal protein L3 [Mycoplasma hyorhinis HUB-1]
 gi|304309381|gb|ADM21861.1| 50S ribosomal protein L3 [Mycoplasma hyorhinis HUB-1]
 gi|330723950|gb|AEC46320.1| 50S ribosomal protein L3 [Mycoplasma hyorhinis MCLD]
          Length = 231

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 78/221 (35%), Positives = 118/221 (53%), Gaps = 9/221 (4%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GMT ++  EG  IPVTV+ +    V    T DKNGY A+Q+ A + K    +
Sbjct: 2   KGILGKKVGMTQLFTEEGISIPVTVVEVQPNVVTNVLTKDKNGYEAIQLAAFDKKKSRFT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F   +  PK+ + EFR    +    +G     S F  G+ VDV G + GKGF+G
Sbjct: 62  KPELGHFKKADTEPKRFVKEFR----NMQAELGQKVDLSIFEEGEFVDVVGTSKGKGFAG 117

Query: 123 AMKRHNFGGLRATHGVSISH---RSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
            +KR+N      +HG        R  GS G      +V K   M G +G  R TV+NLE+
Sbjct: 118 TIKRYNQHIGPKSHGGGGGSKPIRQTGSIGDISG-NKVVKGMTMPGHLGHERTTVQNLEI 176

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
           + +D    ++++KG VPG KK S++++++S K A     +V
Sbjct: 177 IKIDLTNNILVIKGSVPGPKK-SFLVIKESVKQAPKKAAEV 216


>gi|226329480|ref|ZP_03804998.1| hypothetical protein PROPEN_03389 [Proteus penneri ATCC 35198]
 gi|225202666|gb|EEG85020.1| hypothetical protein PROPEN_03389 [Proteus penneri ATCC 35198]
          Length = 181

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 85/181 (46%), Positives = 113/181 (62%), Gaps = 2/181 (1%)

Query: 32  NCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL 91
           N +V   R L+K+GY A+QV  G  K   V KP  G F+   V   + L EFR+ + ++ 
Sbjct: 3   NNRVTQVRDLEKDGYRAIQVTTGSKKANRVLKPEAGHFAKAGVEAGRLLREFRLNEGEE- 61

Query: 92  LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151
             VG   S   F   + VDVTG + GKGF+G +KR NF    ATHG S+SHR  GS G  
Sbjct: 62  YTVGQSISVEIFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQN 121

Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           Q PG+VFK KKMAG++G  +VTV++LEVV VD +R L+LVKG VPGA   S ++V+ + K
Sbjct: 122 QTPGKVFKGKKMAGQLGNEQVTVQSLEVVRVDAERNLLLVKGAVPGA-TGSDLIVKPAVK 180

Query: 212 S 212
           +
Sbjct: 181 A 181


>gi|156363345|ref|XP_001626005.1| predicted protein [Nematostella vectensis]
 gi|156212865|gb|EDO33905.1| predicted protein [Nematostella vectensis]
          Length = 264

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 82/220 (37%), Positives = 122/220 (55%), Gaps = 7/220 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG----YMAVQVGAGEAK 57
           R+G V  KLGM+ ++  +GRR+PVT++ + +C+VV  R    +G       +QVGA    
Sbjct: 8   RTGAVGVKLGMSALWLKDGRRLPVTLIQIKDCEVVQARVAKGHGGRDPQTELQVGAVNKL 67

Query: 58  VKN-VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116
             N + K   G F   +V PK+K+  F V  D  L P G+  + ++F  GQ V + G+T 
Sbjct: 68  ELNQIGKAQFGHFKRFSVRPKRKVCSFPVTPDALLTP-GTPITAAHFYPGQYVKIQGVTK 126

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
            KGF G MKR   GG  A+HG S +HR  G+TG  QDPGRV+  KKMAG MG    T+  
Sbjct: 127 DKGFQGVMKRWGMGGQPASHGQSKTHRKMGATGGGQDPGRVWPGKKMAGHMGNKNCTLHA 186

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           + V  ++ K  ++ V+G  PG     ++ + D++K   + 
Sbjct: 187 VRVHRINTKYNVLYVQGQCPGP-TGGFLKISDAWKRHPHA 225


>gi|302842094|ref|XP_002952591.1| plastid/chloroplast ribosomal protein L3 [Volvox carteri f.
           nagariensis]
 gi|300262230|gb|EFJ46438.1| plastid/chloroplast ribosomal protein L3 [Volvox carteri f.
           nagariensis]
          Length = 259

 Score =  216 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 81/216 (37%), Positives = 110/216 (50%), Gaps = 6/216 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDN-CQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           GV+  K GM   +   G  +P TV+ L+    V   +T D +GY AVQVG      + V+
Sbjct: 45  GVLGTKAGMMSYFTENGLCVPATVIALEEGNVVTQVKTEDTDGYNAVQVGYKAVAERKVT 104

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119
           KP  G      V P + L EF+++     +    G     S     G+ VD+ G+T+GKG
Sbjct: 105 KPELGHLKKAGVQPMRHLVEFKLKDRATVESYQPGQELDVSSLLKEGEAVDIAGVTVGKG 164

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR +      THG S SHR HGS G    P RVF   KMAG+MG  R TVKN  +
Sbjct: 165 FQGTIKRWHHKRGAMTHG-SKSHREHGSIGSATTPSRVFPGLKMAGQMGNVRATVKNQTL 223

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           + VD +R  ++VKG VPG   N  + +  +    VN
Sbjct: 224 LKVDSERRALIVKGSVPGKVGN-VVEITPAKLVGVN 258


>gi|51598732|ref|YP_072920.1| 50S ribosomal protein L3 [Borrelia garinii PBi]
 gi|81825630|sp|Q661E3|RL3_BORGA RecName: Full=50S ribosomal protein L3
 gi|51573303|gb|AAU07328.1| ribosomal protein L3 [Borrelia garinii PBi]
          Length = 206

 Score =  216 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 93/209 (44%), Positives = 128/209 (61%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++   G  IPVTV+      ++  +T+D++GY A+  G+ + K   VSK
Sbjct: 3   GLIGKKVGMTQIFQKNGIVIPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKVSK 62

Query: 64  PMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G + S  ++ PKK + E    K  D    G       F   + VDVTG T GKGF G
Sbjct: 63  PIKGQYKSLKDIEPKKYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRMGGN+ T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNKQTIQNLEVVLI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D++   ILVKG VPGA K S+++V+ S K
Sbjct: 179 DEENRAILVKGAVPGA-KGSFVVVKKSKK 206


>gi|219684396|ref|ZP_03539340.1| ribosomal protein L3 [Borrelia garinii PBr]
 gi|219672385|gb|EED29438.1| ribosomal protein L3 [Borrelia garinii PBr]
          Length = 206

 Score =  216 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 92/209 (44%), Positives = 128/209 (61%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++   G  IPVTV+      ++  +T+D++GY A+  G+ + K   VSK
Sbjct: 3   GLIGKKVGMTQIFQKNGIVIPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKVSK 62

Query: 64  PMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G + S  ++ P+K + E    K  D    G       F   + VDVTG T GKGF G
Sbjct: 63  PIKGQYKSLKDIEPQKYVIEL---KGLDGYDPGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRMGGN+ T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNKQTIQNLEVVLI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D++   ILVKG VPGA K S+++V+ S K
Sbjct: 179 DEENRAILVKGAVPGA-KGSFVVVKKSKK 206


>gi|225552448|ref|ZP_03773388.1| ribosomal protein L3 [Borrelia sp. SV1]
 gi|225371446|gb|EEH00876.1| ribosomal protein L3 [Borrelia sp. SV1]
          Length = 206

 Score =  216 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 89/209 (42%), Positives = 128/209 (61%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++   G  +PVTV+      ++  +T+D++GY A+  G+ + K   VSK
Sbjct: 3   GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKVSK 62

Query: 64  PMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G +    ++ PK+ + E    K  D    G       F   + VDVTG T GKGF G
Sbjct: 63  PIKGQYKGLKDIEPKRYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRMGGN+ T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D+++  +LVKG VPGA K S+++V+ S K
Sbjct: 179 DEEKRALLVKGAVPGA-KGSFVVVKKSKK 206


>gi|57530745|ref|NP_001006366.1| 39S ribosomal protein L3, mitochondrial [Gallus gallus]
 gi|53128932|emb|CAG31347.1| hypothetical protein RCJMB04_5e20 [Gallus gallus]
          Length = 348

 Score =  216 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 78/221 (35%), Positives = 114/221 (51%), Gaps = 5/221 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG-YMA-VQVGAGEAKV 58
           +R GVVA KLGM  ++   G++  VT+L + +C V+ + + + +G   A + VG      
Sbjct: 96  VRVGVVAVKLGMMPIWTKSGKKHAVTLLKVQDCHVLKYVSKEDSGGKTAKLLVGGKNVSP 155

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
            + S+     F    V  K+K+  F V  DD ++  G+    ++F  GQ+VDVT  TIGK
Sbjct: 156 FSKSEAEMEIFREAGVPRKQKVTTFNVT-DDAIIKPGTPLYAAHFRPGQIVDVTAKTIGK 214

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G MKR  F G  A+HG + +HR  G+    +   RVF  KKM G+MG    T   L+
Sbjct: 215 GFQGVMKRWGFKGQPASHGQTKTHRRPGAISTNK-VSRVFPGKKMPGKMGNIYRTSFGLK 273

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           V  ++ K  +I V G VPG   N  + VRD+         K
Sbjct: 274 VWRINTKHDIIYVHGSVPG-HTNCLVKVRDTKLRVYKDCNK 313


>gi|3915827|sp|P94267|RL3_BORBU RecName: Full=50S ribosomal protein L3
          Length = 206

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 89/209 (42%), Positives = 128/209 (61%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++   G  +PVTV+      ++  +T+D++GY A+  G+ + K   VSK
Sbjct: 3   GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKVSK 62

Query: 64  PMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G + S  ++ PK+ + E    K  D    G       F   + VDVTG T GKGF G
Sbjct: 63  PIKGQYKSLKDIEPKRYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRM GN+ T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMAGNQQTIQNLEVVLI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D+++  +LVKG VPGA K S+++V+ S K
Sbjct: 179 DEEKRALLVKGAVPGA-KGSFVVVKKSKK 206


>gi|224531994|ref|ZP_03672626.1| ribosomal protein L3 [Borrelia valaisiana VS116]
 gi|224511459|gb|EEF81865.1| ribosomal protein L3 [Borrelia valaisiana VS116]
          Length = 206

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 94/209 (44%), Positives = 129/209 (61%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT V+   G  +PVTV+      ++  +T+D++GY A+  G+ + K   VSK
Sbjct: 3   GLIGKKVGMTQVFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKVSK 62

Query: 64  PMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G + S  ++ PKK + E    K  D    G       F   + VDVTG T GKGF G
Sbjct: 63  PIKGQYKSLKDIEPKKYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRMGGN+ T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D++R  ILVKG VPGA K S+++V+ S K
Sbjct: 179 DEERRAILVKGAVPGA-KGSFVVVKKSKK 206


>gi|323342789|ref|ZP_08083021.1| 50S ribosomal protein L3 [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463901|gb|EFY09095.1| 50S ribosomal protein L3 [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 230

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 72/219 (32%), Positives = 117/219 (53%), Gaps = 5/219 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RKLGMT V+  +G+ IPV+V+ +    V+  +T++ + Y AVQ+GA + K +  +
Sbjct: 2   KGLLGRKLGMTQVFTTDGKLIPVSVVEVLPNVVLQKKTMESDNYEAVQLGAFDVKEQRAN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K      +  + +PKK + E    +  +   VG+      F+ G+ VDVTG + G GF G
Sbjct: 62  KSEIAHAAKASTAPKKFVREIAGSEMMN-FEVGAEIKADLFSEGEYVDVTGTSRGHGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           ++ R N       HG S  HR  GS      +P  + K + + G+ GG   T + LEV+ 
Sbjct: 121 SIVRANQKIGPKAHG-SGFHRGVGSLATGGLNPAVIKKGRILPGQHGGYTTTNQKLEVIK 179

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
           VD +   +L+KG +PG KK  +++V+ + K  V  K  V
Sbjct: 180 VDTESNYLLIKGNIPGPKKG-FVIVKSTVKR-VKSKDPV 216


>gi|216263354|ref|ZP_03435349.1| ribosomal protein L3 [Borrelia afzelii ACA-1]
 gi|215980198|gb|EEC21019.1| ribosomal protein L3 [Borrelia afzelii ACA-1]
          Length = 206

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 92/209 (44%), Positives = 129/209 (61%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++   G  +PVTV+      ++  +T+D++GY A+  G+ + K   VSK
Sbjct: 3   GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKVSK 62

Query: 64  PMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G + S  ++ PKK + E    K  D    G       F   + VDVTG T GKGF G
Sbjct: 63  PIKGQYKSLKDIEPKKYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRMGGN+ T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D+++  ILVKG VPGA K S+++V+ S K
Sbjct: 179 DEEKRAILVKGAVPGA-KGSFVVVKKSKK 206


>gi|224534796|ref|ZP_03675368.1| ribosomal protein L3 [Borrelia spielmanii A14S]
 gi|224514044|gb|EEF84366.1| ribosomal protein L3 [Borrelia spielmanii A14S]
          Length = 206

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 92/209 (44%), Positives = 129/209 (61%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++   G  +PVT++      ++  +T+D++GY A+  G+ + K   VSK
Sbjct: 3   GLIGKKVGMTQIFQKNGIVVPVTIIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKVSK 62

Query: 64  PMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G + S  ++ PKK + E    K  D    G       F   + VDVTG T GKGF G
Sbjct: 63  PIKGQYKSLKDIEPKKYVIEL---KGLDGYDAGDEIKVDVFKSVRYVDVTGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  A+HG S  HR  G TG    P R FK  KMAGRMGGN+ T++NLEVV +
Sbjct: 120 AMKRHNFSGGPASHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D+++  ILVKG VPGA K S+++V+ S K
Sbjct: 179 DEEKRAILVKGAVPGA-KGSFVVVKKSKK 206


>gi|283794897|ref|YP_003359250.1| ribosomal protein L3 [Cryptomonas paramecium]
 gi|253981869|gb|ACT46786.1| ribosomal protein L3 [Cryptomonas paramecium]
          Length = 210

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 86/206 (41%), Positives = 121/206 (58%), Gaps = 3/206 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  K+GMT V++  G  IP T++ +  C V   +T+ K GY ++Q+G       +
Sbjct: 3   MNFGILGTKVGMTNVFDPSGVAIPGTIVKVGPCIVTQVKTVPKEGYSSIQLGYFSVAKAS 62

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +SKP  G     N    + L EFRV   D+ L +G   + S F+VG  V V G ++GKGF
Sbjct: 63  LSKPELGHLKISNSQAVRYLREFRVDSPDENL-LGQEVTVSKFSVGDRVSVAGKSVGKGF 121

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           SG +KRH+F     THG S +HR  GS G    PGRVF  K+MAGR+GG +VT+KNL VV
Sbjct: 122 SGTVKRHHFTRGPMTHG-SKNHREPGSIGMGTTPGRVFPGKRMAGRLGGKKVTIKNLRVV 180

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
            V  +   +++KG VPG KK S + +
Sbjct: 181 FVSLENNFLVLKGSVPG-KKGSLLRI 205


>gi|255639119|gb|ACU19859.1| unknown [Glycine max]
          Length = 264

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 81/209 (38%), Positives = 113/209 (54%), Gaps = 3/209 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
            GV+  KLGM   +  +G  +PVTV+   +   V   +T   +GY AVQVG    + + +
Sbjct: 49  IGVMGTKLGMMSYFESDGEVVPVTVVGFKEGNIVTQIKTEATDGYDAVQVGYRRVRDRKL 108

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G    V   P + L EFR+Q  D       +     F  G LVDV+G TIGKGF 
Sbjct: 109 TKPEMGHLHKVGAIPMRHLQEFRLQAIDGFDLNQRLLFDETFKEGDLVDVSGTTIGKGFQ 168

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNF     THG S SHR  GS G    PGRV+K KKM GRMGG +  ++ L++V 
Sbjct: 169 GGIKRHNFKRGPMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVK 227

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           +D    ++++KG +PG   N  + +  + 
Sbjct: 228 IDKDLNVLMIKGALPGKPGN-LLRITPAK 255


>gi|94968254|ref|YP_590302.1| 50S ribosomal protein L3 [Candidatus Koribacter versatilis
           Ellin345]
 gi|123381602|sp|Q1ISC2|RL3_ACIBL RecName: Full=50S ribosomal protein L3
 gi|94550304|gb|ABF40228.1| LSU ribosomal protein L3P [Candidatus Koribacter versatilis
           Ellin345]
          Length = 244

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 78/226 (34%), Positives = 122/226 (53%), Gaps = 11/226 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVK 59
           M +G++ +K+GMT +++ +G   PVTVL    C +   +T +K+GY A QVG  E  K  
Sbjct: 1   MINGLIGKKIGMTQLFDSKGDVRPVTVLQAGPCVITQRKTANKDGYDAAQVGLVEFVKET 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKD-------DDLLPVGSVFSPSYFTVGQLVDVT 112
            ++K   G     ++ P + L EF +  D       +  + VG       F   + VDVT
Sbjct: 61  RLTKAQLGHLGKNDLPPVRTLHEFAIVADGPSEAESNGEVKVGDKVLVDLFEGSKFVDVT 120

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++ G+GF+G +KRH F G   +HG     +  GS G    P RVFK  +MAG MG ++V
Sbjct: 121 GVSKGRGFAGVVKRHKFAGGARSHGSMF--QISGSIGSSAFPSRVFKGMRMAGHMGQDQV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           TV+NL ++ +D    L++V+G VPG  K++ + +  S K     +G
Sbjct: 179 TVRNLRILGIDKDENLLVVEGAVPGP-KDATVFITMSKKPPRERRG 223


>gi|159485314|ref|XP_001700690.1| plastid ribosomal protein L3 [Chlamydomonas reinhardtii]
 gi|158272032|gb|EDO97839.1| plastid ribosomal protein L3 [Chlamydomonas reinhardtii]
          Length = 259

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 79/218 (36%), Positives = 112/218 (51%), Gaps = 6/218 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDN-CQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
             GV+  K GM   +  +G  +P TV+ L+    V   +T D +GY AVQ+G      K 
Sbjct: 43  AMGVLGTKAGMMSYFTEDGLCVPATVIALEEGNVVTQVKTQDTDGYNAVQIGYKATAEKR 102

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPS-YFTVGQLVDVTGMTIG 117
           V+KP  G      V P + L EF+++     +    G     +     G+ VD+ G+T+G
Sbjct: 103 VTKPELGHLKKAGVPPMRHLVEFKLKDRAAVEAYQPGQALDVAALLKEGEPVDIAGITVG 162

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF G +KR +      +HG S SHR HGS G    P RVF   KMAG+MG  R+TVKN 
Sbjct: 163 KGFQGTIKRWHHKRGAMSHG-SKSHREHGSIGSATTPSRVFPGLKMAGQMGNVRMTVKNQ 221

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
            ++ VD +R  ++VKG VPG   N  + +  +    VN
Sbjct: 222 SLLKVDTERHALVVKGSVPGKVGN-VVEITPAKLVGVN 258


>gi|116780926|gb|ABK21883.1| unknown [Picea sitchensis]
          Length = 303

 Score =  215 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 81/209 (38%), Positives = 112/209 (53%), Gaps = 3/209 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
            GV+  KLGM   +   G+ +PVTV+   +   V   +T   +GY AVQVG    + K +
Sbjct: 88  VGVMGTKLGMMSYFEPGGKFVPVTVVGFHEGNIVTQIKTEATDGYEAVQVGYRRVRDKKL 147

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G  + V   P + L EFR+   D       +     F  G LVDV+G +IGKGF 
Sbjct: 148 TKPEMGHLNKVGTIPMRHLQEFRLTSVDGFELSQRLTFEELFKEGDLVDVSGKSIGKGFQ 207

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNF     +HG S SHR  GS G    PGRV+  KKM GRMGG +  ++ L+VV 
Sbjct: 208 GGIKRHNFRRGPMSHG-SKSHRQLGSIGAGTTPGRVYPGKKMPGRMGGTKTKIRKLQVVK 266

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           +D +   +L+KG VPG   N  + +  + 
Sbjct: 267 IDSELRTVLIKGAVPGKPGN-LLRITPAK 294


>gi|72080533|ref|YP_287591.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae 7448]
 gi|109893525|sp|Q4A8H1|RL3_MYCH7 RecName: Full=50S ribosomal protein L3
 gi|71913657|gb|AAZ53568.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae 7448]
          Length = 230

 Score =  215 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 77/221 (34%), Positives = 121/221 (54%), Gaps = 7/221 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GM+ ++  EG  IPV+++ +    V    T +KN Y A+Q+ A + K     
Sbjct: 2   KGILGKKVGMSQLFTTEGIAIPVSIIEVPENIVTKIITKEKNSYNAIQLAAFDKKQSRFL 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+  N  PK+ + EFR   D     +G     S F+ G+ VDVTG + GKGF+G
Sbjct: 62  KPEIGHFAKANTKPKRFIKEFR---DFQGYKLGQTVDVSIFSPGEFVDVTGTSKGKGFAG 118

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180
            +KR+N      +HG     +    TG   D    +V K   M GR+G  +VT ++LE++
Sbjct: 119 TIKRYNQAIGPRSHGGGGGSKPIRQTGSLGDISGNKVVKGMTMPGRLGHEKVTKQSLEII 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
            VD +  L+++KG VPG KK S+++++ + K   N K  VS
Sbjct: 179 KVDKENNLLVLKGSVPGPKK-SFLVIKSAIKKP-NPKNPVS 217


>gi|71893546|ref|YP_278992.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae J]
 gi|109893526|sp|Q4AAE0|RL3_MYCHJ RecName: Full=50S ribosomal protein L3
 gi|71851673|gb|AAZ44281.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae J]
          Length = 230

 Score =  215 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 77/221 (34%), Positives = 121/221 (54%), Gaps = 7/221 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GM+ ++  EG  IPV+++ +    V    T +KN Y A+Q+ A + K     
Sbjct: 2   KGILGKKVGMSQLFTTEGIAIPVSIIEVPENIVTKIITKEKNSYDAIQLAAFDKKQSRFL 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+  N  PK+ + EFR   D     +G     S F+ G+ VDVTG + GKGF+G
Sbjct: 62  KPEIGHFAKANTKPKRFIKEFR---DFQGYKLGQTVDVSIFSPGEFVDVTGTSKGKGFAG 118

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180
            +KR+N      +HG     +    TG   D    +V K   M GR+G  +VT ++LE++
Sbjct: 119 TIKRYNQAIGPRSHGGGGGSKPIRQTGSLGDISGNKVVKGMTMPGRLGHEKVTKQSLEII 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
            VD +  L+++KG VPG KK S+++++ + K   N K  VS
Sbjct: 179 KVDKENNLLVLKGSVPGPKK-SFLVIKSAIKKP-NPKNPVS 217


>gi|187251822|ref|YP_001876304.1| 50S ribosomal protein L3 [Elusimicrobium minutum Pei191]
 gi|186971982|gb|ACC98967.1| Ribosomal protein L3 [Elusimicrobium minutum Pei191]
          Length = 259

 Score =  215 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 84/217 (38%), Positives = 120/217 (55%), Gaps = 3/217 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           V+  K+GMT +++ +G    V+V+    C+VV  RT +K+GY AV +G GE K K ++KP
Sbjct: 32  VLGEKMGMTQLFDEKGNLHAVSVVKAGPCKVVRVRTQEKDGYTAVCLGFGEVKEKALNKP 91

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGA 123
             GFF     +P + + E RV  D     VG V S    F  G  VDV G   G+GF+GA
Sbjct: 92  ELGFFKKTTQAPVRHMKEHRVS-DVTGFEVGQVVSLDKIFKPGDYVDVQGKIKGRGFAGA 150

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G  A+HG S   R+ G    R+  G+V   ++MAG  G    TV  +EV+ VD
Sbjct: 151 MKRHGFAGQPASHGASDRERAPGGLASRRSLGKVLSGQRMAGHYGNTTQTVAKIEVIKVD 210

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
            +  LI +KG VPGA K + + V ++ K+  +    +
Sbjct: 211 SENNLIFLKGSVPGA-KGTIVSVLETSKTRKHIVAPI 246


>gi|119484833|ref|ZP_01619315.1| 50S ribosomal protein L3 [Lyngbya sp. PCC 8106]
 gi|119457651|gb|EAW38775.1| 50S ribosomal protein L3 [Lyngbya sp. PCC 8106]
          Length = 218

 Score =  215 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 79/215 (36%), Positives = 110/215 (51%), Gaps = 20/215 (9%)

Query: 12  MTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK----------- 59
           MT V++   G  IPVTV+    C V   +T   +GY A+Q+G GE K K           
Sbjct: 1   MTQVFDAESGIAIPVTVIEAGPCIVTQIKTESTDGYTAIQLGYGEVKNKTRKLNTVKSPG 60

Query: 60  -----NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGM 114
                 +S   +G  +       + L E+R+ +D     +G       F  GQLVDV+G+
Sbjct: 61  KEVNKYLSNAEQGHLAKSGGQLVRHLREYRI-EDTSSYELGQELKADLFEPGQLVDVSGI 119

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           ++G+GFSG  KRHNF      HG S +HR  GS G    PGRV+  KKMAGR GG ++T 
Sbjct: 120 SMGRGFSGFQKRHNFRRGPMAHG-SKNHRQPGSIGPGTTPGRVYPGKKMAGRYGGKKITT 178

Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
             L VV +D +R L+L+KG VPG      + +  +
Sbjct: 179 SKLIVVRIDPERNLLLIKGAVPGKP-GGLLNITPA 212


>gi|170064762|ref|XP_001867661.1| mitochondrial 39S ribosomal protein L3 [Culex quinquefasciatus]
 gi|167882034|gb|EDS45417.1| mitochondrial 39S ribosomal protein L3 [Culex quinquefasciatus]
          Length = 371

 Score =  215 bits (548), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 67/230 (29%), Positives = 111/230 (48%), Gaps = 15/230 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH--------------RTLDKNGYM 47
           R+GV+A+K+G   ++  +G +I  T+L + +  VV +              +   KN Y 
Sbjct: 104 RTGVIAKKIGQYPLWRKDGTKIRTTLLQIIDNHVVKYIPPEEFEPPREPNQKRNWKNPYG 163

Query: 48  AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
            + VGA        +K   G F    V PK+ L  F +  +  +LP G+  + ++F VG 
Sbjct: 164 CLLVGAESRDPSIFTKEYCGLFKDSGVIPKQHLCRFIISPEARILP-GTPLNVTHFRVGD 222

Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
            VDV G T+  GF G +KRH+F G+ A+HGV+ +HR  G+ G      RV+   KM G M
Sbjct: 223 FVDVRGKTVDHGFQGVVKRHSFKGMPASHGVTKTHRRPGNIGAGGAKARVWPGTKMPGHM 282

Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           G     ++ L++  ++ K  ++ V+G       N  + + D+       K
Sbjct: 283 GNRWRNLRGLKIWRINTKYNVMWVQGSNIAGDTNGLVYIYDTILPLRKYK 332


>gi|68474538|ref|XP_718642.1| likely mitochondrial ribosomal protein (E. coli L3) [Candida
           albicans SC5314]
 gi|46440421|gb|EAK99727.1| likely mitochondrial ribosomal protein (E. coli L3) [Candida
           albicans SC5314]
          Length = 293

 Score =  215 bits (548), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 100/220 (45%), Positives = 134/220 (60%), Gaps = 6/220 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+ A K GM   +N +G  IP TVL +D+C+V+ ++     GY AV +G  +      
Sbjct: 66  RPGLFAIKRGMITWFNEKGEHIPATVLEVDSCEVLGYKLFKDFGYTAVIMGTIDKLKNVK 125

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDD-----LLPVGSVFSPSYFTVGQLVDVTGMTI 116
           S      F +  VSPK+K+ EF+++  D+     L+PVG+  +  YF+VGQ VDV G+T 
Sbjct: 126 STNDLRIFETAKVSPKQKIGEFKIRSIDNDIESKLIPVGTELTADYFSVGQKVDVKGVTK 185

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           GKGF+G MKR  F G RATHG S +HR+ G+TG  Q+PGRVF  KKM GRMG    T  N
Sbjct: 186 GKGFAGVMKRWGFSGGRATHGTSKAHRTPGATGGNQNPGRVFPGKKMPGRMGHQNNTGFN 245

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           LEV+  D + G+++VKG VPG KK S I V D+ K   N 
Sbjct: 246 LEVLHTDGEAGILIVKGNVPGPKK-SIIKVSDAIKEYGNS 284


>gi|33236514|gb|AAP98602.1| ribosomal protein L3 [Chlamydophila pneumoniae TW-183]
          Length = 235

 Score =  215 bits (548), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 76/218 (34%), Positives = 113/218 (51%), Gaps = 11/218 (5%)

Query: 1   MR--SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58
           MR    V+ +K GM  +++ +G  +  +V+ ++   V   +T + +GY ++Q+GA E   
Sbjct: 17  MRSHISVMGKKEGMIHIFDKDGSLVACSVIRVEPNVVTQIKTKESDGYFSLQIGAEEMNA 76

Query: 59  K------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
                   VSKP  G          + L E R  ++  + + +G  F    F     VDV
Sbjct: 77  PAHTITKRVSKPKLGHLRKAGGRVFRFLKEVRGSEEALNGVSLGDAFGLEVFEDVSSVDV 136

Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
            G++ GKGF G MK+  F G   +HG S  HR  GS G R  PGR F   K    MG   
Sbjct: 137 RGISKGKGFQGVMKKFGFRGGPGSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGAEN 195

Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           VTVKNLEV+ VD ++ ++LVKG +PGA + S ++V+ S
Sbjct: 196 VTVKNLEVIKVDLEKKVLLVKGAIPGA-RGSIVIVKHS 232


>gi|238879545|gb|EEQ43183.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 293

 Score =  215 bits (548), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 100/220 (45%), Positives = 134/220 (60%), Gaps = 6/220 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+ A K GM   +N +G  IP TVL +D+C+V+ ++     GY AV +G  +      
Sbjct: 66  RPGLFAIKRGMITWFNEKGEHIPATVLEVDSCEVLGYKLFKDFGYTAVIMGTIDKLKNVK 125

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDD-----LLPVGSVFSPSYFTVGQLVDVTGMTI 116
           S      F +  VSPK+K+ EF+++  D+     L+PVG+  +  YF+VGQ VDV G+T 
Sbjct: 126 STNDLRIFETAKVSPKQKIGEFKIRSIDNDIESKLIPVGTELTADYFSVGQKVDVKGVTK 185

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           GKGF+G MKR  F G RATHG S +HR+ G+TG  Q+PGRVF  KKM GRMG    T  N
Sbjct: 186 GKGFAGVMKRWGFSGGRATHGTSKAHRTPGATGGNQNPGRVFPGKKMPGRMGHQNNTGFN 245

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
           LEV+  D + G+++VKG VPG KK S I V D+ K   N 
Sbjct: 246 LEVLHTDGEAGILIVKGNVPGPKK-SIIKVSDAIKEYGNS 284


>gi|1685371|gb|AAB36822.1| ribosomal protein L3 [Borrelia burgdorferi]
          Length = 206

 Score =  215 bits (548), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 89/209 (42%), Positives = 128/209 (61%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++   G  +PVTV+      ++  +T+D++GY A+  G+ + K   VSK
Sbjct: 3   GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKVSK 62

Query: 64  PMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G + S  ++ PK+ + E    K  D    G       F   + VDVTG T GKGF G
Sbjct: 63  PIKGQYKSLKDIEPKRYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRM GN+ T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMAGNQQTIQNLEVVLI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           D+++  +LVKG VPGA K S+++V+ S K
Sbjct: 179 DEEKRALLVKGPVPGA-KGSFVVVKKSKK 206


>gi|307194194|gb|EFN76611.1| 39S ribosomal protein L3, mitochondrial [Harpegnathos saltator]
          Length = 348

 Score =  215 bits (548), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 70/230 (30%), Positives = 118/230 (51%), Gaps = 16/230 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN----GYMAVQ------- 50
           R+G++A+K+G+  ++  +G ++  T+L + + +VV +   ++     G   +Q       
Sbjct: 81  RTGLIAKKIGVYPLWLKDGTKVYSTLLQVVDNEVVKYIPPEEFYPVIGKKPIQIKRRLGC 140

Query: 51  --VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQL 108
             VGAG    + V+K   G F    V PK  L  F +  +  L P G+    ++F  G++
Sbjct: 141 LVVGAGNINPQLVTKEYSGIFKDSGVMPKLVLRRFIISPEAALQP-GTPLFATHFKPGEV 199

Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
           VD+ G TI +GF G MKR  F G+ ATHGV+ +HR  G+ G      RV    KM G MG
Sbjct: 200 VDIRGKTIDRGFQGVMKRWGFKGMPATHGVTKTHRRPGNIGSGGQKARVMPGTKMPGHMG 259

Query: 169 GNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217
                +K +E++ ++ K  ++ VKG  +PG + N++  + D+       K
Sbjct: 260 NRWRILKGVEILRINTKYNVLWVKGHNIPG-ETNNYCYIYDTILPLKKSK 308


>gi|111115307|ref|YP_709925.1| 50S ribosomal protein L3 [Borrelia afzelii PKo]
 gi|123341335|sp|Q0SN29|RL3_BORAP RecName: Full=50S ribosomal protein L3
 gi|110890581|gb|ABH01749.1| ribosomal protein L3 [Borrelia afzelii PKo]
          Length = 206

 Score =  215 bits (547), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 91/209 (43%), Positives = 129/209 (61%), Gaps = 6/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++   G  +PVTV+      ++  +T+D++GY A+  G+ + K   VSK
Sbjct: 3   GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKVSK 62

Query: 64  PMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           P++G + S  ++ PKK + E    K  D    G       F   + VDVTG T GKGF G
Sbjct: 63  PIKGQYKSLKDIEPKKYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           AMKRHNF G  ++HG S  HR  G TG    P R FK  KMAGRMGGN+ T++NLEVV +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           ++++  ILVKG VPGA K S+++V+ S K
Sbjct: 179 NEEKRAILVKGAVPGA-KGSFVVVKKSKK 206


>gi|47459070|ref|YP_015932.1| 50S ribosomal protein L3 [Mycoplasma mobile 163K]
 gi|81828477|sp|Q6KI55|RL3_MYCMO RecName: Full=50S ribosomal protein L3
 gi|47458399|gb|AAT27721.1| 50S ribosomal protein l3 [Mycoplasma mobile 163K]
          Length = 297

 Score =  215 bits (547), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 77/218 (35%), Positives = 122/218 (55%), Gaps = 6/218 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GMT +Y  +G ++PVTV+ +    V       K+GY+A+Q+GA + K +   
Sbjct: 2   KGILGQKIGMTQIYTAQGNKVPVTVIEVKPNVVTHKFENTKDGYVALQLGAFDQKERKFK 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F   N +PK+ + E R   + D   +G +     F  G+LVDVTG++ GKGF+G
Sbjct: 62  KPEIGHFKKSNTTPKRFVKEIR---NMDGYNLGDLVKADIFKSGELVDVTGISKGKGFAG 118

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180
            +KRHN      +HG     +    TG   D    +V K   M G +G  + T++NLEVV
Sbjct: 119 TIKRHNQKIGPKSHGGGGGSKPVRQTGSIGDIAGNKVLKGMTMPGHLGNVQRTIQNLEVV 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
            VD K  ++LVKG VPG  KN +++++ + K+  + + 
Sbjct: 179 KVDIKNNILLVKGSVPGP-KNCFLIIKSAIKNLPSREA 215


>gi|58579302|ref|YP_197514.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Welgevonden]
 gi|58417928|emb|CAI27132.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Welgevonden]
          Length = 236

 Score =  215 bits (547), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 102/215 (47%), Positives = 145/215 (67%), Gaps = 5/215 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  K+G + +++ EG+RIPVT+LHL +  VV  +  D +GY +V    G     N+
Sbjct: 9   RIGLLLEKVGHSAIFDNEGKRIPVTLLHLRDSFVVSIKDKDSHGYTSVV--FGMKVSTNM 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP        N++   K+FE RV   D+ L VG+    ++F   Q VD+TG ++GKGF+
Sbjct: 67  KKPQLKILQKSNINVNCKIFESRVDHIDN-LTVGAKVLITHFVENQYVDITGCSLGKGFA 125

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF GL+A+HGVSISHRS GSTG  QDPGRV+K KKMAG +G +RVTV+N++V+S
Sbjct: 126 GVMKRHNFKGLKASHGVSISHRSQGSTGQCQDPGRVYKGKKMAGHLGNSRVTVQNIKVIS 185

Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVN 215
           VD ++ L++VKG  +PGA+  S++ VRD+ K  V 
Sbjct: 186 VDKEKSLLVVKGNNIPGAQ-GSYLFVRDAIKKPVP 219


>gi|197122296|ref|YP_002134247.1| 50S ribosomal protein L3 [Anaeromyxobacter sp. K]
 gi|220917078|ref|YP_002492382.1| ribosomal protein L3 [Anaeromyxobacter dehalogenans 2CP-1]
 gi|226725127|sp|B4UAM2|RL3_ANASK RecName: Full=50S ribosomal protein L3
 gi|254803648|sp|B8J817|RL3_ANAD2 RecName: Full=50S ribosomal protein L3
 gi|196172145|gb|ACG73118.1| ribosomal protein L3 [Anaeromyxobacter sp. K]
 gi|219954932|gb|ACL65316.1| ribosomal protein L3 [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 236

 Score =  215 bits (547), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 82/226 (36%), Positives = 121/226 (53%), Gaps = 8/226 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG---EAK 57
           M +G++A+K+GMT ++  EG  +PVTVL    C VV  +T +K+GY AV +G G   E  
Sbjct: 1   MSTGLLAKKVGMTQIFTPEGDCVPVTVLEAGPCTVVRRKTAEKDGYDAVVIGFGVVDEKH 60

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPS-YFTVGQLVDVTGM 114
              +SKP  G F        + + E RV+    L  L  G V +    F   Q +DV G+
Sbjct: 61  AHRLSKPEVGVFKKAGTPIFRHVKEIRVKDAKQLGDLKAGDVLTVDKVFKANQRIDVAGV 120

Query: 115 TIGKGFSGAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
           T G+GF+G MKR N  G  R +      HR  G+ G R+ PG+V+K K + G  G + VT
Sbjct: 121 TKGRGFTGVMKRWNMKGAARDSSTAHEHHRHVGAIGQRKTPGKVWKGKHLPGHYGVDNVT 180

Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           ++NL VV ++ ++ ++LV G VPG   +  + V  + K     K K
Sbjct: 181 IQNLTVVGIEAEQNVLLVSGAVPG-HADGLLFVNTAAKGQPRIKQK 225


>gi|312601074|gb|ADQ90329.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae 168]
          Length = 230

 Score =  214 bits (546), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 77/221 (34%), Positives = 121/221 (54%), Gaps = 7/221 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GM+ ++  EG  IPV+++ +    V    T +KN Y A+Q+ A + K     
Sbjct: 2   KGILGKKVGMSQLFTTEGIAIPVSIIEVPENIVTKIITKEKNSYDAIQLAAFDKKQSRFL 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+  N  PK+ + EFR   D     +G     S F+ G+ VDVTG + GKGF+G
Sbjct: 62  KPEIGHFAKANTKPKRFIKEFR---DFQGYKLGQTVDVSIFSPGEFVDVTGTSKGKGFAG 118

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180
            +KR+N      +HG     +    TG   D    +V K   M GR+G  +VT ++LE++
Sbjct: 119 TIKRYNQAIGPRSHGGGGGSKPIRQTGSLGDISGNKVVKGMTMPGRLGHEKVTKQSLEII 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
            VD +  L+++KG VPG KK S+++++ + K   N K  VS
Sbjct: 179 KVDKENNLLVLKGSVPGPKK-SFLVIKSAIKKP-NPKNPVS 217


>gi|37912991|gb|AAR05320.1| ribosomal protein L3 [uncultured marine alpha proteobacterium
           HOT2C01]
          Length = 229

 Score =  214 bits (546), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 103/212 (48%), Positives = 140/212 (66%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSG++A+K+GM+ +Y   G  IPVTVLH++NC+++   T +      V VGA + K   
Sbjct: 1   MRSGIIAKKIGMSNLYTQSGTNIPVTVLHVENCKIIDRVTSENENSDKVLVGACKLKKTK 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            S   +GFF        K L EF + KD + +  G     S+F  GQ +DV+G T GKGF
Sbjct: 61  KS--QKGFFDKKKTDAYKYLREFEISKDQE-IKSGDELKASHFKEGQFIDVSGYTKGKGF 117

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G MKRHNF GLRA+HGVS+SHRSHGSTG  QDPG+VFK KKMAG+ G    T+++L+VV
Sbjct: 118 AGVMKRHNFSGLRASHGVSVSHRSHGSTGQCQDPGKVFKGKKMAGQYGDVHKTLQSLQVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD+++ LI VKG  PG+ + +W++V DS K 
Sbjct: 178 KVDEQKNLICVKGATPGS-RGTWLVVEDSIKK 208


>gi|307069692|ref|YP_003878169.1| 50S ribosomal subunit protein L3 [Candidatus Zinderia insecticola
           CARI]
 gi|306482952|gb|ADM89823.1| 50S ribosomal subunit protein L3 [Candidatus Zinderia insecticola
           CARI]
          Length = 202

 Score =  214 bits (546), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 80/204 (39%), Positives = 123/204 (60%), Gaps = 3/204 (1%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK-VKNVSK 63
           ++ +K+GM+C+YN  G  IPVT++ + N  V   + + K+ Y ++Q+  G+ K   N+ K
Sbjct: 1   MIGKKIGMSCLYNKNGSMIPVTIIDVSNNFVTQIKNIKKDKYFSIQISYGKNKISSNMKK 60

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P+ G F          + EF+  K      +G     + F + Q V + G +IGKGFSG 
Sbjct: 61  PLIGHFYKSKTKYNYIIKEFK-NKRYSKFNLGERIKINIFNLNQKVSIKGKSIGKGFSGT 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KRHNF   RA+HG S SH+S GS G  QDPGRVFK KKM G++G    T++NLE++ +D
Sbjct: 120 IKRHNFSSGRASHGNSRSHKSPGSVGMCQDPGRVFKGKKMCGQLGNKNCTIRNLEILKID 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207
           +K  L+ +KG +PG  KN+++ + 
Sbjct: 180 NKNNLLWIKGSIPG-FKNNFVFIY 202


>gi|116283537|gb|AAH16586.1| Mrpl3 protein [Mus musculus]
          Length = 243

 Score =  214 bits (546), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 70/210 (33%), Positives = 104/210 (49%), Gaps = 5/210 (2%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP--MRGFF 69
           M  ++  +G++  VT+L + +C V+ +   + +      +  G   V    KP     F+
Sbjct: 1   MMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKIAALTVGGKTVSRFYKPDSRLEFY 60

Query: 70  SSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129
             + + PK+    F V  D+ ++  G+    ++F  GQ VDVT  TIGKGF G MKR  F
Sbjct: 61  RDLGLPPKQIHKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKGFQGVMKRWGF 119

Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLI 189
            G  A+HG + +HR  G+     D  RV+   KM GRMG    TV  L+V  V+ K  +I
Sbjct: 120 KGQPASHGQTKTHRRPGAI-STGDIARVWPGTKMPGRMGNQNRTVYGLKVWRVNTKHNII 178

Query: 190 LVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            V G VPG  KN  + ++DS   A     K
Sbjct: 179 YVNGSVPG-HKNCLVKIKDSTLPAYKDSCK 207


>gi|57239336|ref|YP_180472.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Welgevonden]
 gi|57161415|emb|CAH58339.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Welgevonden]
          Length = 231

 Score =  214 bits (546), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 102/215 (47%), Positives = 145/215 (67%), Gaps = 5/215 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  K+G + +++ EG+RIPVT+LHL +  VV  +  D +GY +V    G     N+
Sbjct: 4   RIGLLLEKVGHSAIFDNEGKRIPVTLLHLRDSFVVSIKDKDSHGYTSVV--FGMKVSTNM 61

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP        N++   K+FE RV   D+ L VG+    ++F   Q VD+TG ++GKGF+
Sbjct: 62  KKPQLKILQKSNINVNCKIFESRVDHIDN-LTVGAKVLITHFVENQYVDITGCSLGKGFA 120

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF GL+A+HGVSISHRS GSTG  QDPGRV+K KKMAG +G +RVTV+N++V+S
Sbjct: 121 GVMKRHNFKGLKASHGVSISHRSQGSTGQCQDPGRVYKGKKMAGHLGNSRVTVQNIKVIS 180

Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVN 215
           VD ++ L++VKG  +PGA+  S++ VRD+ K  V 
Sbjct: 181 VDKEKSLLVVKGNNIPGAQ-GSYLFVRDAIKKPVP 214


>gi|215400772|ref|YP_002327533.1| ribosomal protein L3 [Vaucheria litorea]
 gi|194441222|gb|ACF70950.1| ribosomal protein L3 [Vaucheria litorea]
          Length = 196

 Score =  214 bits (546), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 74/198 (37%), Positives = 118/198 (59%), Gaps = 3/198 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V+  EG  +PVTV+ +  C V   +T   +GY A+Q+G  +  ++ ++K   G    
Sbjct: 1   MTQVFYKEGLAVPVTVIRIGPCLVTKIKTTTTDGYNAIQIGYCQVPIRKLTKGQLGHLKK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
           V + P K L E+  +  ++   VG + + + F +GQLV+++G++IGKGFSG  KR+NF  
Sbjct: 61  VGLPPLKYLTEYNFKDINEFY-VGQILTINNFNLGQLVNISGLSIGKGFSGTCKRYNFKR 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
              THG S SH++ GS G    PGRVF  KKM G+ G  +VT+  L+++ +D +  L++V
Sbjct: 120 GPMTHG-SKSHKAPGSIGPGTTPGRVFPGKKMPGQHGNKKVTILKLKILGIDTEENLLVV 178

Query: 192 KGCVPGAKKNSWILVRDS 209
           KG VPG   N ++ +  +
Sbjct: 179 KGSVPGKPGN-FLNITPA 195


>gi|86158411|ref|YP_465196.1| 50S ribosomal protein L3 [Anaeromyxobacter dehalogenans 2CP-C]
 gi|109893409|sp|Q2IJD0|RL3_ANADE RecName: Full=50S ribosomal protein L3
 gi|85774922|gb|ABC81759.1| LSU ribosomal protein L3P [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 236

 Score =  214 bits (546), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 80/226 (35%), Positives = 120/226 (53%), Gaps = 8/226 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG---EAK 57
           M +G++A+K+GMT ++  EG  +PVTVL    C VV  +T +K+GY AV +G G   E  
Sbjct: 1   MSTGLLAKKVGMTQIFTPEGDCVPVTVLEAGPCTVVRRKTAEKDGYDAVVIGFGVVDEKH 60

Query: 58  VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPS-YFTVGQLVDVTGM 114
              +SKP  G F        + + E RV+       L  G V +    F   Q +DV G+
Sbjct: 61  AHRLSKPEVGVFKKAGTPIFRHVKEIRVKDAKLLGDLKAGDVLTVDKVFKANQRIDVAGV 120

Query: 115 TIGKGFSGAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
           T G+GF+G MKR N  G  R +      HR  G+ G R+ PG+V+K K + G  G + +T
Sbjct: 121 TKGRGFTGVMKRWNMKGAARDSSTAHEHHRHVGAIGQRKTPGKVWKGKHLPGHYGVDNIT 180

Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           ++NL VV ++ ++ ++LV G VPG   +  + V  + K     K K
Sbjct: 181 IQNLTVVGIEPEQNVLLVSGAVPG-HADGLLFVNTAAKGQPRIKQK 225


>gi|262341013|ref|YP_003283868.1| 50S ribosomal protein L3 [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272350|gb|ACY40258.1| 50S ribosomal protein L3 [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 210

 Score =  214 bits (545), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 89/205 (43%), Positives = 132/205 (64%), Gaps = 3/205 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ + +GMT ++   G+ +P TV+ ++ C V+  +T++ +GY +VQ+G GE K+K  +
Sbjct: 2   SGLIGKNIGMTSIFLENGKNVPCTVIKVNPCYVIQIKTVENDGYFSVQLGTGEKKLKKTN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
            P+ G F    +SP+KKL EFR +     L +G   S   F  G+LV+V G++ GKGF G
Sbjct: 62  NPLLGHFKKSGLSPRKKLLEFR-ENSISHLKLGEKVSVDTFKKGELVNVKGISKGKGFQG 120

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRHNF G    +HG     RS GS G   DP RVFK KKMAG+MG   +TVKNLE++ 
Sbjct: 121 VVKRHNFSGVGERSHGQHNRLRSPGSIGAGSDPSRVFKGKKMAGKMGKKNITVKNLEILK 180

Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
           +D  + LI++KG VPG  KNS++++
Sbjct: 181 IDIHQNLIILKGSVPG-NKNSYLMI 204


>gi|183221347|ref|YP_001839343.1| 50S ribosomal protein L3 [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911440|ref|YP_001962995.1| 50S ribosomal protein L3 [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|226730528|sp|B0SAF4|RL3_LEPBA RecName: Full=50S ribosomal protein L3
 gi|226730529|sp|B0SSH7|RL3_LEPBP RecName: Full=50S ribosomal protein L3
 gi|167776116|gb|ABZ94417.1| 50S Ribosomal protein L3 [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779769|gb|ABZ98067.1| 50S ribosomal protein L3 [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 207

 Score =  213 bits (544), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 84/208 (40%), Positives = 115/208 (55%), Gaps = 7/208 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++  KLGM  ++N +G+ + VTVL +  C V   +T   +GY AVQ+  G+AK K+
Sbjct: 1   MAKGLIGEKLGMAHIFNNDGKMVTVTVLRVGPCFVSQVKTEANDGYEAVQLAFGDAKEKH 60

Query: 61  VSKPMRGFFSSVNV-SPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGK 118
           ++K   G     N+ +PKK L EF   K  + + VGS       F +   V VTG + GK
Sbjct: 61  LTKAELGHIKKANIATPKKTLVEF---KGFEGVAVGSEVKLADIFALDDTVKVTGTSKGK 117

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           G  G +KRH F G  A HG S   R  GS G    PGRVFK  KM GRMG  + TV+NL+
Sbjct: 118 GTQGVVKRHGFAGGPAGHG-SRFQRHPGSIGSNTTPGRVFKGLKMGGRMGSEQTTVRNLK 176

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILV 206
           VV +D    L+ V G VPG ++   + +
Sbjct: 177 VVKIDADANLVFVSGPVPGRERG-IVTI 203


>gi|313891553|ref|ZP_07825163.1| 50S ribosomal protein L3 [Dialister microaerophilus UPII 345-E]
 gi|329121828|ref|ZP_08250443.1| 50S ribosomal protein L3 [Dialister micraerophilus DSM 19965]
 gi|313120012|gb|EFR43194.1| 50S ribosomal protein L3 [Dialister microaerophilus UPII 345-E]
 gi|327467766|gb|EGF13258.1| 50S ribosomal protein L3 [Dialister micraerophilus DSM 19965]
          Length = 213

 Score =  213 bits (544), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 86/215 (40%), Positives = 125/215 (58%), Gaps = 5/215 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ RKLGM+ V+   G  +PV+V+ +    VV  +T++ +GY AVQ+G G  K K+
Sbjct: 1   MSKAILGRKLGMSQVFAENGDLVPVSVIEVLPNTVVAVKTVETDGYYAVQLGYGAIKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP++G F    V+P K L E R  +      VG   +   F  G ++DV G++ GKGF
Sbjct: 61  LTKPLKGQFEKAGVAPTKFLREHRFSEKPA-YEVGQTLAADIFAEGDVIDVVGISKGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD--PGRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KRHN      +HG S +HR   S G R     G+VFK KKM G MG +RVTV+NL+
Sbjct: 120 AGTIKRHNHQRGPESHG-SKNHRQTASLGARMSGGGGKVFKGKKMPGHMGCDRVTVQNLK 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           VV +D  R L+LVK       K   + V+++ KSA
Sbjct: 179 VVRIDTARNLMLVK-GGIPGPKGGLVKVQEAVKSA 212


>gi|145341932|ref|XP_001416053.1| Plastid ribosomal protein L3, imported to chloroplast, large
           ribosomal subunit [Ostreococcus lucimarinus CCE9901]
 gi|144576277|gb|ABO94345.1| Plastid ribosomal protein L3, imported to chloroplast, large
           ribosomal subunit [Ostreococcus lucimarinus CCE9901]
          Length = 241

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 86/211 (40%), Positives = 111/211 (52%), Gaps = 7/211 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDN-CQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
            G    K GMT V+  +G  +PVTV+ + +   V   +T   +GY AVQVG    +   +
Sbjct: 25  VGAFGSKAGMTQVFTDDGLCVPVTVIAVRDGNVVTQVKTEATDGYNAVQVGYDAVRDDKL 84

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGF 120
           +KP  G          + L EFR++ D     VG+   P   F  G  VDV G TIGKGF
Sbjct: 85  TKPELGHCKKAGAPALRHLEEFRLR-DAPTYEVGAQIKPTELFKEGDKVDVRGRTIGKGF 143

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            GA+KR+ F     THG S SHR HGS G   +PGR++  K+M G MG   VT K L VV
Sbjct: 144 QGAVKRYGFSRGLMTHG-SKSHRQHGSIGSGTNPGRIYPGKRMHGHMGNEMVTTKGLTVV 202

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           SV  +   I+VKG VPG KK +   V  + K
Sbjct: 203 SV--EDDCIIVKGNVPG-KKGALCKVTPNKK 230


>gi|88608492|ref|YP_506157.1| ribosomal protein L3 [Neorickettsia sennetsu str. Miyayama]
 gi|88600661|gb|ABD46129.1| ribosomal protein L3 [Neorickettsia sennetsu str. Miyayama]
          Length = 210

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 94/212 (44%), Positives = 131/212 (61%), Gaps = 7/212 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ +K+G T VY+     +P+T+L L+   V+     +++G +  +V  G  K   +
Sbjct: 3   RVGLLLKKVGCTSVYDDRFSLVPITLLQLEENVVLSA--EERDGVVIARVSFGTRK---L 57

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            +P       + +    ++ EFRV       P+GS  +  +F  GQ VD  G +IGKGF+
Sbjct: 58  KRPQSACLKKLGLEKGGRVVEFRVSPRFMPEPLGS-LTVEHFRPGQYVDAVGTSIGKGFA 116

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF GLRA+HGVSISHRS GSTG  QDPG+VFK KKMAG MG  RVT++NL V  
Sbjct: 117 GVMKRHNFAGLRASHGVSISHRSGGSTGQCQDPGKVFKGKKMAGHMGNARVTIQNLLVQL 176

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           VD +  LI V+G VPG  KNS++L++D+ K  
Sbjct: 177 VDVENCLIGVRGSVPGC-KNSYVLLKDALKKG 207


>gi|320166925|gb|EFW43824.1| mitochondrial ribosomal protein L3 [Capsaspora owczarzaki ATCC
           30864]
          Length = 566

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 84/212 (39%), Positives = 127/212 (59%), Gaps = 4/212 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GV+A K+GM   +N  G+R+P+TVL + +  V+  R  + +GY A+Q+ AGE K    
Sbjct: 324 RTGVIATKVGMMHTWNHWGQRLPLTVLQISDAAVLDFRVPESHGYTALQIAAGEIKQP-- 381

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +K + G F  V ++ +K + EFRV  +  L+P G+    ++F  GQ VDV   T G+GF+
Sbjct: 382 AKHVEGTFRRVGLTARKHIHEFRVTAN-ALIPPGTRLYAAHFIPGQHVDVLANTKGRGFA 440

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRH   G  A+HG S+ HR+ GS G     GRV+  K+MAG MG       NL V  
Sbjct: 441 GVMKRHGMKGSPASHGHSLVHRAMGSFGGGGGMGRVYPGKRMAGHMGTIPAMHHNLLVYR 500

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           ++ K  L+ VKG VPG +K +++ +RD+ ++ 
Sbjct: 501 INTKHNLVYVKGSVPGPRK-AFVYLRDAVRAP 531


>gi|197294631|ref|YP_001799172.1| 50S ribosomal protein L3 [Candidatus Phytoplasma australiense]
 gi|226730545|sp|B1VAE8|RL3_PHYAS RecName: Full=50S ribosomal protein L3
 gi|171853958|emb|CAM11921.1| 50S ribosomal protein L3 [Candidatus Phytoplasma australiense]
          Length = 221

 Score =  213 bits (542), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 80/224 (35%), Positives = 123/224 (54%), Gaps = 9/224 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++N +G  IP+T++ +    V+  + +  +GY A Q+G  + K K 
Sbjct: 1   MAQGILGKKIGMTQMFNEQGEIIPITIVDVSANVVLQQKNVAIDGYNATQIGFDDKKDKI 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDD----DLLPVGSVFSPSYFTVGQLVDVTGMTI 116
            +KPM G F     +PK+ + E   +K++      L VG   S   F VG LVDVTG + 
Sbjct: 61  TTKPMLGHFKKAKTTPKRFIKEIIFKKENISSLSALAVGDQVSCDLFQVGDLVDVTGTSK 120

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           GKGF+G +KRHN      THG S  HR  GS           K KK+ G+MG   VT++N
Sbjct: 121 GKGFAGVIKRHNQSRGPETHG-SRHHRRPGSM---GPIKGKIKGKKLPGQMGHQTVTIQN 176

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
           L + SVD+++ L L+KG VPG  K  +++++ + K     +   
Sbjct: 177 LVLFSVDNQKNLFLIKGSVPGPNKG-FVVIKSAVKKLSKEQANA 219


>gi|148244329|ref|YP_001219023.1| 50S ribosomal protein L3 [Candidatus Vesicomyosocius okutanii HA]
 gi|226730587|sp|A5CXK4|RL3_VESOH RecName: Full=50S ribosomal protein L3
 gi|146326156|dbj|BAF61299.1| 50S ribosomal protein L3 [Candidatus Vesicomyosocius okutanii HA]
          Length = 241

 Score =  213 bits (542), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 91/224 (40%), Positives = 136/224 (60%), Gaps = 10/224 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEA---- 56
           M   +V +K+GMT + + +G  +PV+V+ ++  ++V  RT+D +GY A+QV  G+     
Sbjct: 1   MAIDLVGQKIGMTRLISDDGSIMPVSVIKIEPNRIVQTRTIDIDGYRAIQVTTGKKVNKK 60

Query: 57  ---KVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113
              KV+ +S  ++G ++  +      L+EF+++  D+ +   +    S F  G  VDV G
Sbjct: 61  GEAKVRRISAAIKGHYAKASQEIGLGLWEFKLE--DNEITNATSIDISLFGAGHYVDVIG 118

Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
            + GKGF G +K HNF    ATHG SISHR+ GSTG  Q+PGRVFK KKMAG MG  +VT
Sbjct: 119 KSKGKGFQGGVKLHNFQMQDATHGNSISHRAIGSTGQCQEPGRVFKGKKMAGHMGNKQVT 178

Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
            + L+VV VD ++ +ILVKG +PGA K  ++ V  S K   + K
Sbjct: 179 QECLKVVKVDIEKSVILVKGSIPGAIKG-FVKVSLSPKKDNSNK 221


>gi|42559212|sp|Q7XYP4|RK3_BIGNA RecName: Full=50S ribosomal protein L3, chloroplastic; Flags:
           Precursor
 gi|32307490|gb|AAP79150.1| ribosomal protein rpL3 [Bigelowiella natans]
          Length = 302

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 82/212 (38%), Positives = 117/212 (55%), Gaps = 4/212 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLD-NCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           ++ G++  K GMT  Y+ EG   PVTV+ L+    V   +T + +GY AVQ+   E + +
Sbjct: 87  IKMGLMGTKAGMTTYYDDEGIAHPVTVIALEAGNVVTQVKTKETDGYDAVQLAYKETRDR 146

Query: 60  NVSKPMRGFFSSVN-VSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
            +  P R        V   K L EF++    +  P   + +   F VG LVDV+G + GK
Sbjct: 147 TIPWPERQHLRKHGNVKAMKHLKEFKIADVSEFTPGQQLKAEELFEVGDLVDVSGTSSGK 206

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G+++R        +HG S SHR HGS GC   P RV+K  KMAGRMG  R TVK L 
Sbjct: 207 GFQGSIRRWGMKRGPMSHG-SKSHRQHGSIGCSATPSRVYKGLKMAGRMGNERKTVKKLP 265

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           V+ V+D+   I+V+G VPG KK + + +R + 
Sbjct: 266 VMMVNDEEKYIVVRGSVPG-KKGTIVELRPTK 296


>gi|42520530|ref|NP_966445.1| 50S ribosomal protein L3 [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|42410269|gb|AAS14379.1| ribosomal protein L3 [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 240

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 97/215 (45%), Positives = 143/215 (66%), Gaps = 6/215 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++   +G T +Y+    R+ VT+LHL    ++  +  DK GY +V +G G+ K  N+
Sbjct: 9   RIGLLMMNIGHTAMYSDN-SRMAVTLLHLSETHIIDIKGQDKCGYNSVILGTGDFK--NI 65

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP   +     ++ K KL+E R+  D   +  G     ++F VGQ +D+TG +IGKGF+
Sbjct: 66  AKPQLEYLKKKGINNKCKLYESRL-NDLSGIECGKKVGINHFVVGQYLDITGYSIGKGFA 124

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF GLRA+HGVSI+HRS GSTG  QDPGRVFK KKMAG +G +R+T +N++++S
Sbjct: 125 GVMKRHNFSGLRASHGVSIAHRSQGSTGQCQDPGRVFKGKKMAGHLGNSRITAQNMKILS 184

Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVN 215
           +D +  +I VKG  VPG  KNS++ VRD+ K +++
Sbjct: 185 IDHENSIIAVKGNNVPG-FKNSYVFVRDAVKKSLH 218


>gi|99032309|pdb|2FTC|C Chain C, Structural Model For The Large Subunit Of The Mammalian
           Mitochondrial Ribosome
          Length = 211

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 76/214 (35%), Positives = 115/214 (53%), Gaps = 5/214 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59
           R G++A KLGM  ++  +G++  VT+L + +C V+ + + +  NG MA + VG       
Sbjct: 1   RVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSRF 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             +  +  F+  + + PK+ +  F +  +  + P G+    ++F  GQ VDVT  TIGKG
Sbjct: 61  RKATSILEFYRELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGKG 119

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR  F G  ATHG + +HR  G+     D GRV+   KM G+MG    T   L+V
Sbjct: 120 FQGVMKRWGFKGQPATHGQTKTHRRPGAV-ATGDIGRVWPGTKMPGKMGNIYRTEYGLKV 178

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             ++ K  +I V G VPG  KN  + V+DS   A
Sbjct: 179 WRINTKHNIIYVNGSVPG-HKNCLVKVKDSKLPA 211


>gi|58617356|ref|YP_196555.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Gardel]
 gi|58416968|emb|CAI28081.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Gardel]
          Length = 235

 Score =  212 bits (540), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 100/215 (46%), Positives = 146/215 (67%), Gaps = 5/215 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  K+G + +++ EG+RIPVT+LHL +  VV  +  D +GY +V    G     N+
Sbjct: 8   RIGLLLEKVGHSAIFDNEGKRIPVTLLHLRDSFVVSIKDKDSHGYTSVV--FGMKVSTNM 65

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP        N++   K+FE RV   D+L+ VG+    ++F   Q VD+TG ++GKGF+
Sbjct: 66  KKPQLKILQKSNINVNCKIFESRVDHIDNLV-VGAKVLITHFVENQYVDITGHSLGKGFA 124

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF GL+A+HGVSISHRS GSTG  QDPGRV+K KKMAG +G ++VTV+N++V+S
Sbjct: 125 GVMKRHNFKGLKASHGVSISHRSQGSTGQCQDPGRVYKGKKMAGHLGNSKVTVQNIKVIS 184

Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVN 215
           VD ++ L++VKG  +PGA+  S++ VRD+ K  + 
Sbjct: 185 VDKEKSLLVVKGNNIPGAQ-GSYLFVRDAIKKPIP 218


>gi|297286892|ref|XP_001115583.2| PREDICTED: 39S ribosomal protein L3, mitochondrial [Macaca mulatta]
          Length = 243

 Score =  212 bits (540), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 72/210 (34%), Positives = 108/210 (51%), Gaps = 5/210 (2%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVKNVSKPMRGFF 69
           M  ++  +G +  VT+L + +C V+ + + +  NG  A + VG         + P+  F+
Sbjct: 1   MMPLWTKDGEKHVVTLLQVQDCHVLKYTSKENHNGKTAALSVGGKTVSRFRKATPVLEFY 60

Query: 70  SSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129
             + + PK+ +  F +  +  + P G+    ++F  GQ VDVT  TIGKGF G +KR  F
Sbjct: 61  RELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGKGFQGVVKRWGF 119

Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLI 189
            G  ATHG + +HR  G+     D GRV+   KM G+MG    T   L+V  ++ K  +I
Sbjct: 120 KGQPATHGQTKTHRRPGAL-STGDIGRVWPGTKMPGKMGNIYRTAYGLKVWRINTKHNII 178

Query: 190 LVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            V G VPG  KN  + VRDS   A    GK
Sbjct: 179 YVNGSVPG-HKNCLVKVRDSKLPAYKDLGK 207


>gi|116327224|ref|YP_796944.1| 50S ribosomal protein L3 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116327264|ref|YP_796984.1| 50S ribosomal protein L3 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116332122|ref|YP_801840.1| 50S ribosomal protein L3 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122280148|sp|Q04PT8|RL3_LEPBJ RecName: Full=50S ribosomal protein L3
 gi|122284929|sp|Q055E4|RL3_LEPBL RecName: Full=50S ribosomal protein L3
 gi|116119968|gb|ABJ78011.1| 50S Ribosomal protein L3 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116120008|gb|ABJ78051.1| 50S Ribosomal protein L3 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125811|gb|ABJ77082.1| 50S Ribosomal protein L3 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 206

 Score =  212 bits (540), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 114/207 (55%), Gaps = 5/207 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GM+ +++ +G  IPVTVL +  C V   ++++ +GY A+Q+   + K   
Sbjct: 1   MAKGLIGKKVGMSQIFDEQGNIIPVTVLEVGPCAVSQVKSVENDGYEAIQLAFQDTKEFQ 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119
           +SK  +   +  ++ PKK L EFR   D      GSV      F V  +V VTG++ G+G
Sbjct: 61  ISKAEKNHLAKASLGPKKVLREFRSFGDSPAT--GSVLKVQDIFAVSDVVKVTGVSKGRG 118

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KR +          S  HR  GS G    P RVFK  K+ GR G  + TV+NL+V
Sbjct: 119 FQGVVKR-HGHAGGPGGHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQQTTVRNLKV 177

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILV 206
           V +++++ L+ V G VPG   N+ I +
Sbjct: 178 VRINEEKNLVFVSGAVPG-TTNTVITI 203


>gi|15835429|ref|NP_297188.1| 50S ribosomal protein L3 [Chlamydia muridarum Nigg]
 gi|270285609|ref|ZP_06195003.1| 50S ribosomal protein L3 [Chlamydia muridarum Nigg]
 gi|270289619|ref|ZP_06195921.1| 50S ribosomal protein L3 [Chlamydia muridarum Weiss]
 gi|301337005|ref|ZP_07225207.1| 50S ribosomal protein L3 [Chlamydia muridarum MopnTet14]
 gi|13878709|sp|Q9PJL4|RL3_CHLMU RecName: Full=50S ribosomal protein L3
 gi|7190843|gb|AAF39617.1| ribosomal protein L3 [Chlamydia muridarum Nigg]
          Length = 221

 Score =  212 bits (540), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 82/218 (37%), Positives = 112/218 (51%), Gaps = 11/218 (5%)

Query: 1   MRSGV--VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK- 57
           MRS +  + +K GM  V++  G  +  +V+ ++   V   +T   +GY AVQ+GA   K 
Sbjct: 1   MRSQLSLIGKKEGMMHVFDKNGNLVACSVISIEPNVVAQLKTASSDGYNAVQMGADAVKA 60

Query: 58  -----VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
                 K  SK + G F        + L E  V ++    + +G  F    F     VDV
Sbjct: 61  PEKTIEKRFSKALLGHFKKSGGCAFRVLKEVVVSEEAVQSVSLGDEFGVEIFDGVSNVDV 120

Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
            G++ GKGF G MK+  F G   +HG S  HR  GS G R  PGR F   K    MG +R
Sbjct: 121 CGISKGKGFQGVMKKFGFRGGPKSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGCDR 179

Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           VTVKNLEVV VD  R ++LVKG +PG  K S ++V+ S
Sbjct: 180 VTVKNLEVVKVDLDRKVMLVKGAIPG-FKGSVVVVKRS 216


>gi|1185166|emb|CAA91649.1| 50S ribosomal protein L3 [Odontella sinensis]
          Length = 196

 Score =  211 bits (539), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 76/195 (38%), Positives = 110/195 (56%), Gaps = 3/195 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT +++  G  IPVT+L +  C +   +T   +GY A+Q+G G    K++++P  G    
Sbjct: 1   MTQIFDESGNIIPVTILKVGPCVITQVKTDLNDGYNAIQIGYGTVSNKSLTQPELGHLQK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
            N+ P K L EFRV   ++   VG V +    + GQ +DVTG + GKGFSG  KRHNF  
Sbjct: 61  SNIQPLKYLKEFRVNNPEE-FKVGQVVNVESLSTGQFIDVTGKSSGKGFSGLQKRHNFTR 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
              THG S +HR+ GS G    PGRV   KKMAG++G      K L+++ V+    +++V
Sbjct: 120 GPMTHG-SKNHRAPGSIGMGTTPGRVLPGKKMAGQLGNKVTKTKKLKIIQVNGNENILVV 178

Query: 192 KGCVPGAKKNSWILV 206
           KG VPG   N  + +
Sbjct: 179 KGSVPGKPGN-LVTI 192


>gi|4376945|gb|AAD18786.1| L3 Ribosomal Protein [Chlamydophila pneumoniae CWL029]
 gi|8979019|dbj|BAA98854.1| L3 ribosomal protein [Chlamydophila pneumoniae J138]
          Length = 225

 Score =  211 bits (539), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 76/218 (34%), Positives = 113/218 (51%), Gaps = 11/218 (5%)

Query: 1   MR--SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58
           MR    V+ +K GM  +++ +G  +  +V+ ++   V   +T + +GY ++Q+GA E   
Sbjct: 7   MRSHISVMGKKEGMIHIFDKDGSLVACSVIRVEPNVVTQIKTKESDGYFSLQIGAEEMNA 66

Query: 59  K------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
                   VSKP  G          + L E R  ++  + + +G  F    F     VDV
Sbjct: 67  PAHTITKRVSKPKLGHLRKAGGRVFRFLKEVRGSEEALNGVSLGDAFGLEVFEDVSSVDV 126

Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
            G++ GKGF G MK+  F G   +HG S  HR  GS G R  PGR F   K    MG   
Sbjct: 127 RGISKGKGFQGVMKKFGFRGGPGSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGAEN 185

Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           VTVKNLEV+ VD ++ ++LVKG +PGA + S ++V+ S
Sbjct: 186 VTVKNLEVIKVDLEKKVLLVKGAIPGA-RGSIVIVKHS 222


>gi|54020070|ref|YP_115700.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae 232]
 gi|81823546|sp|Q601L5|RL3_MYCH2 RecName: Full=50S ribosomal protein L3
 gi|53987243|gb|AAV27444.1| 50s ribosomal protein L3 [Mycoplasma hyopneumoniae 232]
          Length = 230

 Score =  211 bits (539), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 76/221 (34%), Positives = 120/221 (54%), Gaps = 7/221 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GM+ ++  EG  I V+++ +    V    T +KN Y A+Q+ A + K     
Sbjct: 2   KGILGKKVGMSQLFTTEGIAISVSIIEVPENIVTKIITKEKNSYNAIQLAAFDKKQSRFL 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+  N  PK+ + EFR   D     +G     S F+ G+ VDVTG + GKGF+G
Sbjct: 62  KPEIGHFAKANTKPKRFIKEFR---DFQGYKLGQTVDVSIFSPGEFVDVTGTSKGKGFAG 118

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180
            +KR+N      +HG     +    TG   D    +V K   M GR+G  +VT ++LE++
Sbjct: 119 TIKRYNQAIGPRSHGGGGGSKPIRQTGSLGDISGNKVVKGMTMPGRLGHEKVTKQSLEII 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
            VD +  L+++KG VPG KK S+++++ + K   N K  VS
Sbjct: 179 KVDKENNLLVLKGSVPGPKK-SFLVIKSAIKKP-NPKNPVS 217


>gi|29839861|ref|NP_828967.1| 50S ribosomal protein L3 [Chlamydophila caviae GPIC]
 gi|42559611|sp|Q824Q1|RL3_CHLCV RecName: Full=50S ribosomal protein L3
 gi|29834208|gb|AAP04845.1| ribosomal protein L3 [Chlamydophila caviae GPIC]
          Length = 221

 Score =  211 bits (539), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 76/221 (34%), Positives = 115/221 (52%), Gaps = 11/221 (4%)

Query: 1   MRSGV--VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK- 57
           MRS +  + +K GM  V++ +G  +  +V+ + +  V   +    +GY A+Q+GA E   
Sbjct: 1   MRSQLSLMGKKEGMIHVFDKDGNLVACSVISVGSNVVTQIKVDSTDGYNAIQMGANEINV 60

Query: 58  -----VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
                 K ++KP  G            L E R+ +D  + + +G+ F          VD+
Sbjct: 61  PEKTLEKRMNKPELGHLKKSGSRVFGLLKEVRLSEDAINEVSLGNEFGLEVLEDISSVDI 120

Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
           +G++ GKGF G MKR  F G   THG S  HR  GS G R  PGR F   K    MG   
Sbjct: 121 SGVSKGKGFQGVMKRFGFRGGPKTHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGTVN 179

Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VTVKNLEVV +D ++ ++LVKG +PG  + S +++R S ++
Sbjct: 180 VTVKNLEVVKIDLEKKVLLVKGAIPGP-RGSVVVIRRSSRA 219


>gi|91200667|emb|CAJ73718.1| strongly similar to 50S ribosomal protein L3 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 196

 Score =  211 bits (538), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 79/196 (40%), Positives = 118/196 (60%), Gaps = 3/196 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT +Y  EG  +PVT++    C V+  +TL  +GY AVQ+G  + K+K   +P  G  + 
Sbjct: 1   MTQIYTGEGALVPVTLIKAGPCNVLQVKTLGNDGYSAVQLGYKDKKIKRAKRPEIGHAAK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
            ++ P + + E ++    D + +G   +   F   +LVDV G++ GKGF+G MKR    G
Sbjct: 61  ASLLPGRFVKEVKLDTVSD-IHLGQAVTLDIFEDVKLVDVIGISKGKGFAGVMKRWGMKG 119

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
              THG S  HRS GS G   DPGRV + KKM G++G  RVT+KNL+VV VD ++ ++ V
Sbjct: 120 GPQTHG-STRHRSVGSVGAGTDPGRVIRGKKMPGQLGRERVTIKNLDVVKVDKEKNMLFV 178

Query: 192 KGCVPGAKKNSWILVR 207
           KG VPG  K S+++++
Sbjct: 179 KGAVPG-YKGSYLIIK 193


>gi|225629696|ref|ZP_03787668.1| ribosomal protein L3 [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225630301|ref|YP_002727092.1| ribosomal protein L3 [Wolbachia sp. wRi]
 gi|225591449|gb|EEH12517.1| ribosomal protein L3 [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225592282|gb|ACN95301.1| ribosomal protein L3 [Wolbachia sp. wRi]
          Length = 240

 Score =  211 bits (538), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 97/215 (45%), Positives = 143/215 (66%), Gaps = 6/215 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++   +G T +Y+    R+ VT+LHL    ++  +  DK GY +V +G G+ K  N+
Sbjct: 9   RIGLLMMNIGHTAMYSDN-SRMAVTLLHLSETYIIDIKGQDKCGYNSVILGTGDFK--NI 65

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP   +     ++ K KL+E R+  D   +  G     ++F VGQ +D+TG +IGKGF+
Sbjct: 66  AKPQLEYLKKKGINNKCKLYESRL-NDLSGIECGKKVGINHFVVGQYLDITGYSIGKGFA 124

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF GLRA+HGVSI+HRS GSTG  QDPGRVFK KKMAG +G +R+T +N++++S
Sbjct: 125 GVMKRHNFSGLRASHGVSIAHRSQGSTGQCQDPGRVFKGKKMAGHLGNSRITAQNMKILS 184

Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVN 215
           +D +  +I VKG  VPG  KNS++ VRD+ K +++
Sbjct: 185 IDHENSIIAVKGNNVPG-FKNSYVFVRDAVKKSLH 218


>gi|195657099|gb|ACG48017.1| 50S ribosomal protein L3 [Zea mays]
          Length = 267

 Score =  211 bits (538), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 113/211 (53%), Gaps = 5/211 (2%)

Query: 3   SGVVARKLGMTCVYN-IEGRRIPVTVLHL--DNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
            GV+A K+GM   ++   G+ +PVTV+        V   +T   +GY AVQVG    +  
Sbjct: 50  VGVMATKVGMMTYFDPETGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVRED 109

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            +++P  G        P + L EFR+   D   P   +     F  G L+DV+G +IGKG
Sbjct: 110 KLTRPELGHLGKAGAPPLRHLQEFRLTAVDAFEPGQPLDFADLFKEGDLIDVSGNSIGKG 169

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KRHNF     THG S SHR  GS G    PGRV+K KKM GRMGG +  ++ L++
Sbjct: 170 FQGGIKRHNFKRGLMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKI 228

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           V +D+   ++++KG VPG   N  + +  + 
Sbjct: 229 VKIDNNLRVLMIKGAVPGKPGN-LLRITPAK 258


>gi|15639182|ref|NP_218628.1| 50S ribosomal protein L3 [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189025422|ref|YP_001933194.1| 50S ribosomal protein L3 [Treponema pallidum subsp. pallidum SS14]
 gi|6094076|sp|O83219|RL3_TREPA RecName: Full=50S ribosomal protein L3
 gi|226730585|sp|B2S2D6|RL3_TREPS RecName: Full=50S ribosomal protein L3
 gi|3322453|gb|AAC65174.1| ribosomal protein L3 (rplC) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189017997|gb|ACD70615.1| ribosomal protein L3 [Treponema pallidum subsp. pallidum SS14]
 gi|291059596|gb|ADD72331.1| 50S ribosomal protein L3 [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 208

 Score =  211 bits (538), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 81/210 (38%), Positives = 121/210 (57%), Gaps = 5/210 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ +K+GMT +++  G   PVTV+ +++  VV  + +++ GY AV +G G  K   +S
Sbjct: 2   VGLIGQKVGMTQIFDARGCVTPVTVIRVEHNVVVGLKDVERFGYSAVILGTGCMKKSRIS 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   + P + + EFR    D  + VG V         + +DV  ++ GKGF G
Sbjct: 62  KPYAGQFAE-RIPPVRVMREFRGFTLD--VSVGQVLDVRVLESVRYLDVCALSKGKGFQG 118

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KR  F G R++HG S  HR  GSTG    PGR FKN KM GRMG  RVTV+NL +  +
Sbjct: 119 VVKRWGFSGGRSSHG-SKFHREAGSTGQCTSPGRTFKNVKMPGRMGAERVTVQNLRIERI 177

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D   G+++V+G VPG  K + + +R + K 
Sbjct: 178 DVGLGVVMVRGAVPGRNK-ATVFLRTAVKR 206


>gi|16752393|ref|NP_444652.1| 50S ribosomal protein L3 [Chlamydophila pneumoniae AR39]
 gi|161353776|ref|NP_224843.2| 50S ribosomal protein L3 [Chlamydophila pneumoniae CWL029]
 gi|161353803|ref|NP_300703.2| 50S ribosomal protein L3 [Chlamydophila pneumoniae J138]
 gi|161484684|ref|NP_876945.2| 50S ribosomal protein L3 [Chlamydophila pneumoniae TW-183]
 gi|7674301|sp|Q9Z7Q7|RL3_CHLPN RecName: Full=50S ribosomal protein L3
 gi|7189035|gb|AAF37984.1| ribosomal protein L3 [Chlamydophila pneumoniae AR39]
          Length = 219

 Score =  211 bits (537), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 76/218 (34%), Positives = 113/218 (51%), Gaps = 11/218 (5%)

Query: 1   MR--SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58
           MR    V+ +K GM  +++ +G  +  +V+ ++   V   +T + +GY ++Q+GA E   
Sbjct: 1   MRSHISVMGKKEGMIHIFDKDGSLVACSVIRVEPNVVTQIKTKESDGYFSLQIGAEEMNA 60

Query: 59  K------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
                   VSKP  G          + L E R  ++  + + +G  F    F     VDV
Sbjct: 61  PAHTITKRVSKPKLGHLRKAGGRVFRFLKEVRGSEEALNGVSLGDAFGLEVFEDVSSVDV 120

Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
            G++ GKGF G MK+  F G   +HG S  HR  GS G R  PGR F   K    MG   
Sbjct: 121 RGISKGKGFQGVMKKFGFRGGPGSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGAEN 179

Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           VTVKNLEV+ VD ++ ++LVKG +PGA + S ++V+ S
Sbjct: 180 VTVKNLEVIKVDLEKKVLLVKGAIPGA-RGSIVIVKHS 216


>gi|190571546|ref|YP_001975904.1| ribosomal protein L3 [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|190357818|emb|CAQ55274.1| ribosomal protein L3 [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 240

 Score =  210 bits (536), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 96/215 (44%), Positives = 140/215 (65%), Gaps = 6/215 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++   +G T +Y     R+ VT+LHL    ++  +  DK GY +V +G G+ K   +
Sbjct: 9   RIGLLMTNVGHTAMYFDN-SRMAVTLLHLSETYIIDIKGQDKCGYNSVILGTGDLK--KI 65

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP   +     ++ K KL+E R+      +  G     ++F VGQ +D+TG ++GKGF+
Sbjct: 66  AKPQLEYLKKKGINSKCKLYESRLTDLFG-IECGKKVGVNHFVVGQYLDITGYSLGKGFA 124

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF GLRA+HGVSI+HRS GSTG  QDPGRVFK KKMAG +G +RVTV+N++++S
Sbjct: 125 GVMKRHNFSGLRASHGVSIAHRSQGSTGQCQDPGRVFKGKKMAGHLGNSRVTVQNMKILS 184

Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVN 215
           +D +  +I VKG  VPG  KNS++ VRD+ K  ++
Sbjct: 185 IDYENSIIAVKGNNVPG-FKNSYVFVRDAVKKPLH 218


>gi|227501134|ref|ZP_03931183.1| ribosomal protein L3 [Anaerococcus tetradius ATCC 35098]
 gi|227216719|gb|EEI82120.1| ribosomal protein L3 [Anaerococcus tetradius ATCC 35098]
          Length = 209

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 77/186 (41%), Positives = 108/186 (58%), Gaps = 1/186 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           +   K+GMT V + +G   PVTVL  D   VV  +T++ +GY A+QVG  + K KNV+KP
Sbjct: 4   IFTTKVGMTQVIDEDGVITPVTVLKADENVVVQVKTVETDGYNAIQVGYMDKKEKNVTKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           +R  F   N S K+ L E     +   L +G + +   F  G +VDV   + GKG  GA+
Sbjct: 64  VREHFKKANASTKRYLREVNFGDETPELNLGDIITVEQFEAGDIVDVVATSKGKGTQGAI 123

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR N+G   A+HG S SHR  G+     DP RVFK +K +G+MG  RVT++N+E+V V  
Sbjct: 124 KRWNYGRGPASHG-SKSHRVAGARAAGSDPARVFKGRKGSGKMGNERVTIQNIEIVKVSV 182

Query: 185 KRGLIL 190
           +   IL
Sbjct: 183 EDNYIL 188


>gi|257067060|ref|YP_003153316.1| 50S ribosomal protein L3 [Anaerococcus prevotii DSM 20548]
 gi|256798940|gb|ACV29595.1| ribosomal protein L3 [Anaerococcus prevotii DSM 20548]
          Length = 209

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 79/186 (42%), Positives = 108/186 (58%), Gaps = 1/186 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           +   K+GMT V + +G   PVTVL  D   VV  +T++ +GY A+QVG  + K KNV+KP
Sbjct: 4   IFTTKVGMTQVIDEDGVITPVTVLKADENVVVQVKTVETDGYNAIQVGYMDKKEKNVTKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           +R  F   N S K+ L E    ++   L +G   +   F  G +VDV   + GKG  GA+
Sbjct: 64  VREHFKKANASTKRFLREINFGEETPELNLGDTITVEQFEAGDIVDVVATSKGKGTQGAI 123

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR N+G   A+HG S SHR  G+     DP RVFK +K +G+MG  RVTV+N+EVV V  
Sbjct: 124 KRWNYGRGPASHG-SKSHRVAGARAAGSDPARVFKGRKGSGKMGNERVTVQNIEVVKVSV 182

Query: 185 KRGLIL 190
           +   IL
Sbjct: 183 EDNYIL 188


>gi|242063968|ref|XP_002453273.1| hypothetical protein SORBIDRAFT_04g002980 [Sorghum bicolor]
 gi|241933104|gb|EES06249.1| hypothetical protein SORBIDRAFT_04g002980 [Sorghum bicolor]
          Length = 270

 Score =  210 bits (535), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 113/211 (53%), Gaps = 5/211 (2%)

Query: 3   SGVVARKLGMTCVYN-IEGRRIPVTVLHL--DNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
            GV+A K+GM   ++   G+ +PVTV+        V   +T   +GY AVQVG    +  
Sbjct: 53  VGVMATKVGMMTYFDPETGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVRED 112

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            +++P  G        P K L EFR+   D   P   +     F  G ++DV+G TIGKG
Sbjct: 113 KLTRPELGHLGKAGAPPLKHLQEFRLTAVDAFEPGQPLDFADLFKEGDIIDVSGNTIGKG 172

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KRHNF     THG S SHR  GS G    PGRV+K KKM GRMGG +  ++ L++
Sbjct: 173 FQGGIKRHNFKRGLMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGKKTKIRKLKI 231

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           V +D+   ++++KG VPG   N  + +  + 
Sbjct: 232 VKIDNDLRVLMIKGAVPGKPGN-LLRITPAK 261


>gi|224123986|ref|XP_002319213.1| predicted protein [Populus trichocarpa]
 gi|222857589|gb|EEE95136.1| predicted protein [Populus trichocarpa]
          Length = 222

 Score =  210 bits (535), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 81/209 (38%), Positives = 115/209 (55%), Gaps = 3/209 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
            GV+  KLGM   +   G+ +PVTV+   +   V   +T   +GY AVQVG    + K +
Sbjct: 7   VGVMGTKLGMMTYFEPNGKVVPVTVVGFREGNIVTQIKTDATDGYDAVQVGYRRVRDKKL 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G      V P + L EFR+Q  D       +     F  G LVDV+G TIGKGF 
Sbjct: 67  TKPEMGHLEKAGVIPMRHLQEFRLQGLDGFEIGQKLLFEELFKEGDLVDVSGTTIGKGFQ 126

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNF     +HG S SHR+ GS G    PGRV+K KKM GRMGG +  ++ L++V 
Sbjct: 127 GGIKRHNFKRGPMSHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVK 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           +D+   ++++KG +PG   N  + +  + 
Sbjct: 186 IDNDLRVVMIKGALPGKPGN-LLRIAPAK 213


>gi|325479159|gb|EGC82256.1| 50S ribosomal protein L3 [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 209

 Score =  210 bits (535), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 77/186 (41%), Positives = 109/186 (58%), Gaps = 1/186 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           +   K+GMT V + +G   PVTVL  D   VV  +T++ +GY A+QVG  + K KNV KP
Sbjct: 4   IFTTKVGMTQVIDEDGVITPVTVLKADENVVVQVKTVETDGYNAIQVGYMDKKEKNVKKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           +R  F   N + K+ L E    ++   L +G V +   F  G +VD+   + GKG  GA+
Sbjct: 64  VREHFKKANAATKRYLKEVNFGEETPELNLGDVITVEQFEAGDIVDIVATSKGKGTQGAI 123

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR N+G   A+HG S SHR  G+     DP RVFK +K +G+MG  RVT++N+EVV V+ 
Sbjct: 124 KRWNYGRGPASHG-SKSHRVAGARAAGSDPARVFKGRKGSGKMGNERVTIQNIEVVKVNV 182

Query: 185 KRGLIL 190
           +   IL
Sbjct: 183 EDNYIL 188


>gi|302822169|ref|XP_002992744.1| hypothetical protein SELMODRAFT_430901 [Selaginella moellendorffii]
 gi|300139485|gb|EFJ06225.1| hypothetical protein SELMODRAFT_430901 [Selaginella moellendorffii]
          Length = 222

 Score =  210 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 81/209 (38%), Positives = 113/209 (54%), Gaps = 3/209 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
            GV+  K+GM   +  +GR IPVTV+   +   V   +T   +GY AVQVG    +   +
Sbjct: 7   IGVMGTKVGMMTHFMPDGRAIPVTVIGFHEGNIVTQVKTEPTDGYNAVQVGYLRVRDTKL 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G  + +   P + L EFR+   D       +     F VG LVDV+G +IGKGF 
Sbjct: 67  TKPELGHLNKIGTIPMRHLQEFRLVSVDGFELSQRLNVEDIFKVGDLVDVSGKSIGKGFQ 126

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNF     THG S SHR  GS G    PGRV+  KKM GRMG  +  ++ LE++ 
Sbjct: 127 GGIKRHNFKRGPMTHG-SKSHRQLGSIGAGTTPGRVYPGKKMPGRMGFQKTKIRKLEIIK 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           +D +   +LVKG VPG + N  + +  + 
Sbjct: 186 IDPELRAVLVKGAVPGKRGN-LLRITPAK 213


>gi|194708314|gb|ACF88241.1| unknown [Zea mays]
          Length = 262

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 113/211 (53%), Gaps = 5/211 (2%)

Query: 3   SGVVARKLGMTCVYN-IEGRRIPVTVLHL--DNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
            GV+A K+GM   ++   G+ +PVTV+        V   +T   +GY AVQVG    +  
Sbjct: 45  VGVMATKVGMMTYFDPETGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVRED 104

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            +++P  G        P + L EFR+   D   P   +     F  G L+DV+G +IGKG
Sbjct: 105 KLTRPELGHLGKAGAPPLRHLQEFRLTAVDAFEPGQPLDFADLFKEGDLIDVSGNSIGKG 164

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KRHNF     THG S SHR  GS G    PGRV+K KKM GRMGG +  ++ L++
Sbjct: 165 FQGGIKRHNFKRGLMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKI 223

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           V +D+   ++++KG VPG   N  + +  + 
Sbjct: 224 VKIDNNLRVLMIKGAVPGKPGN-LLRITPAK 253


>gi|154274402|ref|XP_001538052.1| hypothetical protein HCAG_05657 [Ajellomyces capsulatus NAm1]
 gi|150414492|gb|EDN09854.1| hypothetical protein HCAG_05657 [Ajellomyces capsulatus NAm1]
          Length = 265

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 86/195 (44%), Positives = 130/195 (66%), Gaps = 2/195 (1%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +A K GMT +++   G+RIP T+L LD  QV+ H+TL KNGY AVQ+G G    +
Sbjct: 71  LRTGTLAIKKGMTAIFDLETGKRIPCTILQLDRVQVISHKTLKKNGYYAVQIGCGWKHER 130

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            V++PM G F++  V+PK+ + EFRV+ ++ LLP+G + + ++F  GQ VD    + G G
Sbjct: 131 AVTRPMLGHFAANGVAPKRHIHEFRVKDENGLLPIGEMINANWFQEGQYVDARSNSRGMG 190

Query: 120 FSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           F+G MKRH F G   +HGVS++HR    S   +    RV+  KKMAG MG  +VT++NL+
Sbjct: 191 FAGVMKRHGFHGQDRSHGVSLTHRSMGSSGPGQGGGSRVYPGKKMAGNMGNKQVTLQNLK 250

Query: 179 VVSVDDKRGLILVKG 193
           V+ VD ++G+++V G
Sbjct: 251 VLKVDAEKGIVVVNG 265


>gi|195059563|ref|XP_001995662.1| GH17642 [Drosophila grimshawi]
 gi|193896448|gb|EDV95314.1| GH17642 [Drosophila grimshawi]
          Length = 373

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 72/229 (31%), Positives = 111/229 (48%), Gaps = 15/229 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
           R G++ARK+G   ++   G R+  T+L + +  V+ +   ++            N Y  V
Sbjct: 109 RCGLIARKIGQYPLWLKNGERVRTTLLQVVDNHVIKYIPPEEYRPTQRPNVHHLNKYGCV 168

Query: 50  QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
            VGA       ++K   G F    V PKK L  F V      L  G+  +  +F VG+ V
Sbjct: 169 LVGAECTNPALLTKEYCGLFRDSGVMPKKNLARFIVSP-QAALAAGTPLNVGHFRVGEFV 227

Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
           DV G T+  GF G +KRH F G+ A+HGV+ +HR  G+ G   + GRV+   KM G MG 
Sbjct: 228 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 287

Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217
               +K L +  ++ K  ++ V+G  VPG+  N  + + D+       K
Sbjct: 288 RWRIIKGLRIWRINTKYNVMWVQGSAVPGS-TNGLVYIYDTILPLRKPK 335


>gi|302337477|ref|YP_003802683.1| 50S ribosomal protein L3 [Spirochaeta smaragdinae DSM 11293]
 gi|301634662|gb|ADK80089.1| 50S ribosomal protein L3 [Spirochaeta smaragdinae DSM 11293]
          Length = 206

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 87/209 (41%), Positives = 124/209 (59%), Gaps = 5/209 (2%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT +++  G   PVTV+ +++  V+  R  +KNGY A  +GA + K K+V+K
Sbjct: 3   GLIGKKVGMTQIFDERGVLTPVTVIKIEDNVVIDKRDEEKNGYTASVIGAEDLKSKHVTK 62

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F   NV PK+ L E R  + +    VG       F     VDV G + GKG+ GA
Sbjct: 63  PYGGQFPE-NVHPKRYLVEMRDFEAES--SVGETLGVGIFKEISFVDVVGTSKGKGYQGA 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRH F G RATHG S  HR  G TG    P +V K  KM GRMG  R TV+NL V+ VD
Sbjct: 120 MKRHGFKGGRATHG-SKFHRGLGGTGMAATPSKVLKGAKMPGRMGAARTTVQNLRVIKVD 178

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +++ +++VKG +PG  + S ++V+ + K 
Sbjct: 179 EEKQVLMVKGAIPGPCQ-SMVIVQKAKKK 206


>gi|321310980|ref|YP_004193309.1| 50S ribosomal protein L4 [Mycoplasma haemofelis str. Langford 1]
 gi|319802824|emb|CBY93470.1| ribosomal protein L3 [Mycoplasma haemofelis str. Langford 1]
          Length = 229

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 83/212 (39%), Positives = 122/212 (57%), Gaps = 6/212 (2%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           +V +KLGMT V++  G  IPVT + ++   ++  +T++K+GY AV VG G  K   +SKP
Sbjct: 4   IVGKKLGMTQVFSDSGTLIPVTAIEVEPNLILSLKTVEKDGYSAVVVGYGSVKETRLSKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGA 123
           +RG F    +  ++ +FE R    D L   G +      F VG LVDV+G+T G GF+GA
Sbjct: 64  VRGQFQKKGLEVRRNIFELRNSSQDGLKE-GELLKVDSLFKVGDLVDVSGVTRGHGFTGA 122

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQD---PGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +K  NF     +HG    HR  GS    +    P +V+K KKMAGR G  RV+  NLE+V
Sbjct: 123 IKLWNFSCGPRSHGAGYPHRYQGSLETGRGGVSPQKVWKGKKMAGRYGCERVSQINLEIV 182

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD ++ L+ VKG V G + NS + ++ + + 
Sbjct: 183 YVDPEKNLLFVKGSVAG-RSNSIVRIKTTTRK 213


>gi|162450261|ref|YP_001612628.1| 50S ribosomal protein L3 [Sorangium cellulosum 'So ce 56']
 gi|254803690|sp|A9FQE0|RL3_SORC5 RecName: Full=50S ribosomal protein L3
 gi|161160843|emb|CAN92148.1| 50S ribosomal protein L3 [Sorangium cellulosum 'So ce 56']
          Length = 232

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 72/211 (34%), Positives = 111/211 (52%), Gaps = 4/211 (1%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++N  G  +  TV+    C V+  RTL+K+GY A+ +G GE   K+ +K
Sbjct: 6   GIIGKKIGMTQIFNETGEVLRCTVVQAG-CVVIGKRTLEKDGYSALILGLGERAEKHTTK 64

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPS-YFTVGQLVDVTGMTIGKGFS 121
           P+ G +     +PK+ + E R   +      +G+       F VGQ VD  G + G+GFS
Sbjct: 65  PVAGAYKKSGQTPKRIVRELRCSPEHAAKYEIGTTLKVDEIFEVGQRVDAQGRSRGRGFS 124

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G ++R +F G   +HG     R  GS G    PGR     KM G  G   V+  NL++  
Sbjct: 125 GVIRRWSFAGAVNSHGTHEYFRHGGSIGTNMTPGRTLPGLKMPGHYGDETVSALNLKIAK 184

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +  +  LIL++G VPG  KN  + +R + K 
Sbjct: 185 LLPEDNLILIEGPVPGP-KNQVVTIRGAVKK 214


>gi|325117734|emb|CBZ53285.1| putative ribosomal protein L3p [Neospora caninum Liverpool]
          Length = 407

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 83/209 (39%), Positives = 118/209 (56%), Gaps = 8/209 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K+GM  +++  G R  VTV  +D C V+  RTLDK+GY A  +G G   +  V
Sbjct: 153 RTGLLAYKIGMMSLWDGWGERHAVTVCQVDRCVVMEQRTLDKDGYEACVMGIGYQPIHKV 212

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KPM G +    + PK ++ EF+   D  LLPVG   S  +FT GQ V V+G +  KG+ 
Sbjct: 213 TKPMLGVYIRSRIEPKSRIAEFKCSSDC-LLPVGHEMSVRHFTPGQHVFVSGWSKDKGYL 271

Query: 122 GAMKRHNFGGLRATHGVS-ISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           G  KR  F G  A+HGV   +H S GS G  +    V++ KKMAG  GG+   V N +V 
Sbjct: 272 GVKKRWGFAGQNASHGVEAKAHSSPGSIGQSKTVNVVWRFKKMAGHAGGDPRVV-NCKVF 330

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            ++ +R LI +KG      K S I + D+
Sbjct: 331 RIEAQRNLIFLKG-----YKGSLIKISDA 354


>gi|194376318|dbj|BAG62918.1| unnamed protein product [Homo sapiens]
          Length = 243

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 72/210 (34%), Positives = 109/210 (51%), Gaps = 5/210 (2%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVKNVSKPMRGFF 69
           M  ++  +G++  VT+L + +C V+ + + +  NG MA + VG         +  +  F+
Sbjct: 1   MMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSRFRKATSILEFY 60

Query: 70  SSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129
             + + PK+ +  F +  +  + P G+    ++F  GQ VDVT  TIGKGF G MKR  F
Sbjct: 61  RELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGKGFQGVMKRWGF 119

Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLI 189
            G  ATHG + +HR  G+     D GRV+   KM G+MG    T   L+V  ++ K  +I
Sbjct: 120 KGQPATHGQTKTHRRPGAV-ATGDIGRVWPGTKMPGKMGNIYRTEYGLKVWRINTKHNII 178

Query: 190 LVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            V G VPG  KN  + V+DS   A    GK
Sbjct: 179 YVNGSVPG-HKNCLVKVKDSKLPAYKDLGK 207


>gi|302824121|ref|XP_002993706.1| hypothetical protein SELMODRAFT_431753 [Selaginella moellendorffii]
 gi|300138430|gb|EFJ05198.1| hypothetical protein SELMODRAFT_431753 [Selaginella moellendorffii]
          Length = 222

 Score =  209 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 82/209 (39%), Positives = 114/209 (54%), Gaps = 3/209 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
            GV+  K+GM   +  +GR IPVTV+   +   V   +T   +GY AVQVG    +   +
Sbjct: 7   IGVMGTKVGMMTHFMPDGRAIPVTVIGFHEGNIVTQVKTEPTDGYNAVQVGYLRVRDTKL 66

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G  + +   P + L EFR+   D   P   +     F VG LVDV+G +IGKGF 
Sbjct: 67  TKPELGHLNKIGTIPMRHLQEFRLVSVDGFEPSQRLNVEDIFKVGDLVDVSGKSIGKGFQ 126

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNF     THG S SHR  GS G    PGRV+  KKM GRMG  +  ++ LE++ 
Sbjct: 127 GGIKRHNFKRGLMTHG-SKSHRQLGSIGAGTTPGRVYPGKKMPGRMGFQKTKIRKLEIIK 185

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           +D +   +LVKG VPG + N  + +  + 
Sbjct: 186 IDPELRAVLVKGAVPGKRGN-LLRITPAK 213


>gi|239618265|ref|YP_002941587.1| ribosomal protein L3 [Kosmotoga olearia TBF 19.5.1]
 gi|259646550|sp|C5CGR4|RL3_KOSOT RecName: Full=50S ribosomal protein L3
 gi|239507096|gb|ACR80583.1| ribosomal protein L3 [Kosmotoga olearia TBF 19.5.1]
          Length = 213

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 90/214 (42%), Positives = 125/214 (58%), Gaps = 8/214 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN-- 60
            G++ RKLGMT +Y  +G+ + VTV+    C VV  +T     Y A+Q+G  E   +   
Sbjct: 2   KGIIGRKLGMTTIY-EDGKALGVTVIKAGPCTVVQKKTAAGGEYNAIQLGFEELSPERAK 60

Query: 61  --VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
             ++KP+   F +  V P + L E RV+  D+   VG V     F  G+LVDVTG T G+
Sbjct: 61  KLLTKPILKKFEAAKVKPHRILKEIRVENPDE-YNVGDVIDAGIFKEGELVDVTGWTKGR 119

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF+GAMKR NFGG   THG S  HR  GS G   +P +++K KKM GR G  RVTV N++
Sbjct: 120 GFTGAMKRWNFGGGEVTHG-SKFHRELGSVGNHTEPAKIWKGKKMPGRYGNERVTVLNVK 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           VV VD + GLI + G VPGA +   +++R + + 
Sbjct: 179 VVKVDAENGLIAIHGAVPGA-RGGLVIIRAAKRP 211


>gi|58584599|ref|YP_198172.1| 50S ribosomal protein L3 [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|58418915|gb|AAW70930.1| Ribosomal protein L3 [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
          Length = 241

 Score =  208 bits (531), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 99/215 (46%), Positives = 141/215 (65%), Gaps = 6/215 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++   +G T +Y+    R+ VT+LHL    +V  R  DK GY +V +G G  K  N+
Sbjct: 9   RIGLLMTNIGHTAIYS-NNSRVAVTLLHLSETYIVDVRRQDKCGYNSVILGIGNFK--NI 65

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP   +   + +S + KL+E R+  D   +  G     ++F VGQ +D+T  +IGKGF+
Sbjct: 66  AKPQLEYLKKMGISNRCKLYESRLS-DLSGIECGKKVGVNHFVVGQYLDITSYSIGKGFA 124

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF GLRA+HGVSI+HRS GSTG  QDPGRVFK K+MAG +G +RVTV+N+E++S
Sbjct: 125 GVMKRHNFCGLRASHGVSIAHRSQGSTGQCQDPGRVFKGKRMAGHLGSSRVTVQNMEILS 184

Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVN 215
           +D     I+VKG  VPG  KNS++ V+D+ K  ++
Sbjct: 185 IDHGNSTIVVKGNNVPG-FKNSYVFVKDAIKKPLH 218


>gi|194700790|gb|ACF84479.1| unknown [Zea mays]
          Length = 230

 Score =  208 bits (531), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 113/211 (53%), Gaps = 5/211 (2%)

Query: 3   SGVVARKLGMTCVYN-IEGRRIPVTVLHL--DNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
            GV+A K+GM   ++   G+ +PVTV+        V   +T   +GY AVQVG    +  
Sbjct: 13  VGVMATKVGMMTYFDPETGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVRED 72

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            +++P  G        P + L EFR+   D   P   +     F  G L+DV+G +IGKG
Sbjct: 73  KLTRPELGHLGKAGAPPLRHLQEFRLTAVDAFEPGQPLDFADLFKEGDLIDVSGNSIGKG 132

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KRHNF     THG S SHR  GS G    PGRV+K KKM GRMGG +  ++ L++
Sbjct: 133 FQGGIKRHNFKRGLMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKI 191

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           V +D+   ++++KG VPG   N  + +  + 
Sbjct: 192 VKIDNNLRVLMIKGAVPGKPGN-LLRITPAK 221


>gi|303282635|ref|XP_003060609.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226458080|gb|EEH55378.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 215

 Score =  208 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 79/209 (37%), Positives = 112/209 (53%), Gaps = 5/209 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLD-NCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
            GV   K GMT ++  +G  +PVTV+ +     V   +T   +GY AVQVG  +     +
Sbjct: 5   VGVFGNKAGMTQLFMDDGLCVPVTVIAVQAGNVVTQVKTEGTDGYNAVQVGYDQVADYKI 64

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G  +   V P + L EFR+++  D  P   +     F  G +VDV G +IGKG+ 
Sbjct: 65  TKPEVGHCAKAGVPPMRHLEEFRLKEASDHAPGQQLKPSEMFKEGDVVDVRGTSIGKGWQ 124

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           GA+K++ F     THG S SHR HGS G    PGR+F  KKM  +MG   VT + L+V+ 
Sbjct: 125 GAVKKYGFSRGLMTHG-SKSHRQHGSVGAGTSPGRIFPGKKMHSQMGNETVTARKLKVMR 183

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           V  +   I+VKG VPG + N  + V  + 
Sbjct: 184 V--EDDCIIVKGSVPGKRGN-LLRVAPAK 209


>gi|2766503|gb|AAB95387.1| ribosomal protein L3 [Mycoplasma gallisepticum]
          Length = 236

 Score =  208 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 79/215 (36%), Positives = 112/215 (52%), Gaps = 8/215 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+   K+GMT V+   GR IPVT++ ++  QVV  +T +K+GY AVQ+G  +   KN++
Sbjct: 2   KGIFGTKVGMTQVFEENGRLIPVTLVRVEPNQVVSVKTKEKDGYDAVQLGFNQTDEKNLN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121
           KP  G F   N +  K L E R         VG +      F  GQ+VDV   T G+GF+
Sbjct: 62  KPELGHFKKANTNNYKYLEEVRGMVG---YKVGDLLKVEELFQEGQVVDVQARTKGRGFT 118

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQD---PGRVFKNKKMAGRMGGNRVTVKNLE 178
           GA+KR NF      HG    HR  GS    +      RV K KKM+G  G   VT++NL 
Sbjct: 119 GAIKRWNFKIGSKGHGAGYPHRFQGSVQAGRGGSQAQRVMKGKKMSGHYGNELVTIQNLS 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           +V    +   +++ G +PGA  NS + +  S K+ 
Sbjct: 179 IVGFLPEVSSVMISGAIPGAN-NSKVRITTSKKNP 212


>gi|24213439|ref|NP_710920.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Lai str.
           56601]
 gi|45658703|ref|YP_002789.1| 50S ribosomal protein L3 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|26454655|sp|Q9XD36|RL3_LEPIN RecName: Full=50S ribosomal protein L3
 gi|73917494|sp|Q72NG1|RL3_LEPIC RecName: Full=50S ribosomal protein L3
 gi|24194209|gb|AAN47938.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Lai str.
           56601]
 gi|45601947|gb|AAS71426.1| 50S ribosomal protein L3 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 206

 Score =  208 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 112/207 (54%), Gaps = 5/207 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GM+ +++ +G  IPVTVL +  C V   ++++ +GY A+Q+   + K   
Sbjct: 1   MAKGLIGKKVGMSQIFDEQGNIIPVTVLEVGPCAVSQVKSVENDGYEAIQLAFQDIKEIQ 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119
            SK  +   +   + PKK L EFR   D      GSV      F V  +V VTG++ G+G
Sbjct: 61  TSKAEKNHLAKAGLGPKKVLKEFRSFGDSP--TAGSVLKIQDVFAVSDVVKVTGVSKGRG 118

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           + G +KR +          S  HR  GS G    P RVFK  K+ GR G  + TV+NL+V
Sbjct: 119 YQGVVKR-HGHAGGPGAHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQKTTVRNLKV 177

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILV 206
           V +++++ L+ V G VPG   N+ I +
Sbjct: 178 VRINEEKNLLFVSGAVPGTA-NTVITI 203


>gi|166154743|ref|YP_001654861.1| 50S ribosomal protein L3 [Chlamydia trachomatis 434/Bu]
 gi|166155618|ref|YP_001653873.1| 50S ribosomal protein L3 [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301336017|ref|ZP_07224261.1| 50S ribosomal protein L3 [Chlamydia trachomatis L2tet1]
 gi|226725148|sp|B0B8A2|RL3_CHLT2 RecName: Full=50S ribosomal protein L3
 gi|226725150|sp|B0BCG7|RL3_CHLTB RecName: Full=50S ribosomal protein L3
 gi|165930731|emb|CAP04228.1| LSU ribosomal protein L3P [Chlamydia trachomatis 434/Bu]
 gi|165931606|emb|CAP07182.1| LSU ribosomal protein L3P [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 221

 Score =  208 bits (530), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 81/218 (37%), Positives = 112/218 (51%), Gaps = 11/218 (5%)

Query: 1   MRSGV--VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK- 57
           MRS +  + +K GM  V++  G  +  +V+ +D   V   +T   +GY AVQ+GA   + 
Sbjct: 1   MRSQLSLIGKKEGMMHVFDKNGNLVACSVISVDANVVAQLKTASSDGYNAVQIGADVVQA 60

Query: 58  -----VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
                 K  SK + G F        + L E  V ++    + +G  F    F     VD+
Sbjct: 61  PEKTIEKRFSKALLGHFKKSGGRACRVLKEVVVSEEAVQSVSLGDEFGLEIFDGVSNVDI 120

Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
            G++ GKGF G MK+  F G   +HG S  HR  GS G R  PGR F   K    MG +R
Sbjct: 121 CGISKGKGFQGVMKKFGFRGGPKSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGCDR 179

Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           VTVKNLEVV VD  R ++LVKG +PG  K S ++V+ S
Sbjct: 180 VTVKNLEVVKVDLDRKVMLVKGAIPG-FKGSVVVVKRS 216


>gi|258646053|ref|ZP_05733522.1| 50S ribosomal protein L3 [Dialister invisus DSM 15470]
 gi|260403423|gb|EEW96970.1| 50S ribosomal protein L3 [Dialister invisus DSM 15470]
          Length = 213

 Score =  208 bits (530), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 89/215 (41%), Positives = 133/215 (61%), Gaps = 5/215 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++  KLGM+ V+   G  +PVTV+ +    VV  +T++ +GY AVQ+G G  K K+
Sbjct: 1   MSKAILGTKLGMSQVFAENGDLVPVTVVEVLPNVVVGVKTVETDGYNAVQIGYGAVKEKH 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           +++P++G F    + P K L E+R+ +  +   VG   +   F  G+ VDV G++ GKGF
Sbjct: 61  LTRPVKGQFEKAGIDPVKYLREYRLAEKPE-YTVGQTLAADIFAAGEFVDVIGISRGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD--PGRVFKNKKMAGRMGGNRVTVKNLE 178
           +G +KR N      +HG S +HR   S G R     G+VFK KKM G++GG+RVTV+NLE
Sbjct: 120 AGTIKRWNHQRGPESHG-SKNHRQTASLGARMSGGGGKVFKGKKMPGQLGGDRVTVQNLE 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           VV VD  R ++LVKG +PGA K S ++V+ + KS+
Sbjct: 179 VVRVDTDRSILLVKGGIPGA-KGSLVMVKTAVKSS 212


>gi|269302431|gb|ACZ32531.1| ribosomal protein L3 [Chlamydophila pneumoniae LPCoLN]
          Length = 219

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 76/218 (34%), Positives = 113/218 (51%), Gaps = 11/218 (5%)

Query: 1   MR--SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58
           MR    V+ +K GM  +++ +G  +  +V+ ++   V   +T + +GY ++Q+GA E   
Sbjct: 1   MRSHISVMGKKEGMIHIFDKDGSLVACSVIRVEPNVVAQIKTKESDGYFSLQMGAEEMNA 60

Query: 59  K------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
                   VSKP  G          + L E R  ++  + + +G  F    F     VDV
Sbjct: 61  PAHTITKRVSKPKLGHLRKAGGRVFRFLKEVRGSEEALNGVSLGDAFGLEVFEDVSSVDV 120

Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
            G++ GKGF G MK+  F G   +HG S  HR  GS G R  PGR F   K    MG   
Sbjct: 121 RGISKGKGFQGVMKKFGFRGGPGSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGAEN 179

Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           VTVKNLEV+ VD ++ ++LVKG +PGA + S ++V+ S
Sbjct: 180 VTVKNLEVIKVDLEKKVLLVKGAIPGA-RGSIVIVKHS 216


>gi|88658345|ref|YP_507227.1| 50S ribosomal protein L3 [Ehrlichia chaffeensis str. Arkansas]
 gi|88599802|gb|ABD45271.1| ribosomal protein L3 [Ehrlichia chaffeensis str. Arkansas]
          Length = 231

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 99/215 (46%), Positives = 146/215 (67%), Gaps = 5/215 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+   K+G T +++ EG+RIP+T+LHL +  ++  +T D +GY AV +G       N+
Sbjct: 4   RIGLFLEKVGHTAIFDNEGKRIPITLLHLRDSFIISKKTKDIHGYDAVVLGVEA--SINL 61

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP         ++ K K+FE RV    D++  G+  S ++F   Q VD+TG ++GKGF+
Sbjct: 62  KKPQSKILEKSKITAKCKIFESRVDNLGDVVE-GAKVSITHFVKDQYVDITGYSLGKGFA 120

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKRHNF GL+A+HGVSI+HRS GSTG  QDPGRV+K KKMAG++G ++VTV+NL+V+ 
Sbjct: 121 GVMKRHNFKGLKASHGVSIAHRSQGSTGQCQDPGRVYKGKKMAGQLGNSKVTVQNLKVIL 180

Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVN 215
           VD +R L+ V+G  +PGA K S++ V+D+ K +V 
Sbjct: 181 VDQERSLLGVRGNNIPGA-KGSYVFVKDAVKKSVP 214


>gi|298243968|ref|ZP_06967775.1| 50S ribosomal protein L3 [Ktedonobacter racemifer DSM 44963]
 gi|297557022|gb|EFH90886.1| 50S ribosomal protein L3 [Ktedonobacter racemifer DSM 44963]
          Length = 262

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 89/258 (34%), Positives = 125/258 (48%), Gaps = 52/258 (20%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M   ++ RK+GMT V+   G  IPVTV+ +  C V   +T+ ++GY AVQ+G  E  +K+
Sbjct: 1   MLDALLGRKVGMTQVFGQNGTVIPVTVIEVGPCIVTQVKTVARDGYEAVQIGFEETTLKH 60

Query: 61  VSKPMRGF----------FSSV-------------------------------------- 72
            ++P  G                                                     
Sbjct: 61  STRPELGHLGHSLPLLKGQRKALQTHDQQAKSEENKEEEKQSKQVRKLLKIRENRQRRPG 120

Query: 73  -NVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129
             + P K L E  +Q+  DL  + +G  F+ S FT G++VD+ G+T GKGF G +KRH F
Sbjct: 121 PELGPFKVLREVGLQEGVDLGSVELGHSFNASLFTDGEIVDIVGITKGKGFQGGVKRHGF 180

Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLI 189
            G   THG S   R+ GS G    PGRV K  +MAGRMG  RVTVK L++V  D +R L+
Sbjct: 181 RGGPRTHGQSDRLRAPGSIGSGTTPGRVLKGTRMAGRMGNARVTVKKLQIVQSDPERNLL 240

Query: 190 LVKGCVPGAKKNSWILVR 207
           +VKG VPGA     + ++
Sbjct: 241 VVKGSVPGAN-GGLLTIK 257


>gi|195398797|ref|XP_002058007.1| GJ15729 [Drosophila virilis]
 gi|194150431|gb|EDW66115.1| GJ15729 [Drosophila virilis]
          Length = 372

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 72/229 (31%), Positives = 110/229 (48%), Gaps = 15/229 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
           R G++ARK+G   ++   G R+  T+L + +  VV +    +            + Y  V
Sbjct: 109 RCGLIARKIGQYPLWLKNGERVRTTLLQVVDNHVVKYIPPGEYTPAQRPRVKHLDRYGCV 168

Query: 50  QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
            VGA       ++K   G F    V P K L  F V     L P G+  +  +F VG+ V
Sbjct: 169 LVGAESTNPALLTKEYCGIFRDSGVMPTKNLARFIVSPQAALAP-GTPLNVGHFRVGEFV 227

Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
           DV G T+  GF G +KRH F G+ A+HGV+ +HR  G+ G   + GRV+   KM G MG 
Sbjct: 228 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKMPGHMGN 287

Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217
               +K L +  ++ K  ++ V+G  VPG+  N  + + D+       K
Sbjct: 288 RWRIIKGLRIWRINTKYNVMWVQGSAVPGS-TNGLVYIYDTVLPLRKPK 335


>gi|315186331|gb|EFU20092.1| 50S ribosomal protein L3 [Spirochaeta thermophila DSM 6578]
          Length = 198

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 85/201 (42%), Positives = 115/201 (57%), Gaps = 4/201 (1%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT V++  G  +PVTV+ ++   VV  RT +++GY A+ +GA   K     KP  G F  
Sbjct: 1   MTQVFDANGYVVPVTVIKVEKNTVVDVRTPERHGYRALVLGAFPLKASRAVKPYLGQFQK 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             + PKK L E R  + D     G       F   + VDV G++ GKG+ G MKRH F G
Sbjct: 61  RGLEPKKVLREIRDFEGD--YKPGDEIGVEIFEGVRFVDVRGLSKGKGYQGVMKRHGFSG 118

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
             A+HG S  HR+HGSTG    P +V K  KMAGRMGG +V V+NL +V VD +RG +LV
Sbjct: 119 GPASHG-SKFHRAHGSTGQATYPAKVLKGTKMAGRMGGVQVCVQNLRIVEVDKERGCLLV 177

Query: 192 KGCVPGAKKNSWILVRDSFKS 212
           +G VPG +K   ++V  + K 
Sbjct: 178 EGAVPGPRKG-VVIVTRAKKK 197


>gi|5163204|gb|AAD40583.1|AF115283_2 ribosomal protein L3 [Leptospira interrogans]
          Length = 206

 Score =  208 bits (529), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 112/207 (54%), Gaps = 5/207 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GM+ +++ +G  IPVTVL +  C V   ++++ +GY A+Q+   + K   
Sbjct: 1   MAKGLIGKKVGMSQIFDEQGNIIPVTVLEVGPCAVSQVKSVENDGYEAIQLAFQDIKEIQ 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119
            SK  +   +   + PKK L EFR   D      G+V      F V  +V VTG++ G+G
Sbjct: 61  TSKAEKNHLAKAGLGPKKVLKEFRSFGDSP--TAGAVLKIQDVFAVSDVVKVTGVSKGRG 118

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           + G +KR +          S  HR  GS G    P RVFK  K+ GR G  + TV+NL+V
Sbjct: 119 YQGVVKR-HGHAGGPGAHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQKTTVRNLKV 177

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILV 206
           V +++++ L+ V G VPG   N+ I +
Sbjct: 178 VRINEEKNLLFVSGAVPGTA-NTVITI 203


>gi|31544255|ref|NP_852833.1| 50S ribosomal protein L3 [Mycoplasma gallisepticum str. R(low)]
 gi|33860197|sp|O52332|RL3_MYCGA RecName: Full=50S ribosomal protein L3
 gi|31541099|gb|AAP56401.1| 50S ribosomal protein L3 [Mycoplasma gallisepticum str. R(low)]
 gi|284930294|gb|ADC30233.1| 50S ribosomal protein L3 [Mycoplasma gallisepticum str. R(high)]
 gi|284931061|gb|ADC30999.1| 50S ribosomal protein L3 [Mycoplasma gallisepticum str. F]
          Length = 236

 Score =  208 bits (529), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 78/215 (36%), Positives = 112/215 (52%), Gaps = 8/215 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+   K+GMT V+   GR IPVT++ ++  QVV  +T +K+GY AVQ+G  +   KN++
Sbjct: 2   KGIFGTKVGMTQVFEENGRLIPVTLVRVEPNQVVSVKTKEKDGYDAVQLGFNQTDEKNLN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121
           KP  G F   N +  K L E R         +G +      F  GQ+VDV   T G+GF+
Sbjct: 62  KPQLGHFKKANTNNYKYLEEVRGMVG---YKIGDLLKVEELFQEGQVVDVQARTKGRGFT 118

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQD---PGRVFKNKKMAGRMGGNRVTVKNLE 178
           GA+KR NF      HG    HR  GS    +      RV K KKM+G  G   VT++NL 
Sbjct: 119 GAIKRWNFKIGSKGHGAGYPHRFQGSVQAGRGGSQAQRVMKGKKMSGHYGNELVTIQNLS 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           +V    +   +++ G +PGA  NS + +  S K+ 
Sbjct: 179 IVGFLPEVSSVMISGAIPGAN-NSKVRITTSKKNP 212


>gi|89898720|ref|YP_515830.1| 50S ribosomal protein L3 [Chlamydophila felis Fe/C-56]
 gi|109893420|sp|Q252V3|RL3_CHLFF RecName: Full=50S ribosomal protein L3
 gi|89332092|dbj|BAE81685.1| 50S ribosomal protein L3 [Chlamydophila felis Fe/C-56]
          Length = 221

 Score =  208 bits (529), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 75/209 (35%), Positives = 109/209 (52%), Gaps = 10/209 (4%)

Query: 1   MRSGV--VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58
           MRS +  + +K GM  V++ +G  +  +V+ +    V   +    +GY A+Q+GA E  V
Sbjct: 1   MRSQLSLMGKKEGMIHVFDKDGNLVACSVISMSPNVVSQIKVDSTDGYNAIQMGADEISV 60

Query: 59  K------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
                   V+KP+ G F        + L E RV +D  +   +GS F    F     VD+
Sbjct: 61  PEKTLQKRVNKPILGHFKKSGSRVFRTLKEVRVSEDAVNEASLGSEFGLEVFEDVSSVDI 120

Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
           +G++ GKGF G MK+  F G   THG S  HR  GS G R  PGR F   K    MG   
Sbjct: 121 SGVSKGKGFQGVMKKFGFRGGPKTHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGAVN 179

Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKK 200
           VT+KNLEV+ +D ++ ++LVKG +PG + 
Sbjct: 180 VTIKNLEVIKIDLEKKVLLVKGAIPGPRG 208


>gi|194246733|ref|YP_002004372.1| 50S ribosomal protein L3 [Candidatus Phytoplasma mali]
 gi|254803686|sp|B3QZZ1|RL3_PHYMT RecName: Full=50S ribosomal protein L3
 gi|193807090|emb|CAP18528.1| 50S ribosomal protein L3 [Candidatus Phytoplasma mali]
          Length = 219

 Score =  207 bits (528), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 73/219 (33%), Positives = 129/219 (58%), Gaps = 9/219 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V++ +G  IP+T++ + +  ++   +++KNGY++ Q+G    + K 
Sbjct: 1   MAKGILGRKIGMTQVFDEKGSLIPITIVDVSDNVILQQNSVEKNGYLSTQLGFSSKREKL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFR----VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116
            +KP  G F +   SPK+ + E R    ++ +   L +G+    + F  G +VDV G++ 
Sbjct: 61  STKPALGHFKNAKTSPKRFIKEIRFLPGIKNELSELDLGTSLKTNLFQPGDIVDVIGISK 120

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
           GKGFSG++KRHN      +HG S  HR  GS           K KK+ G+MG   VT++N
Sbjct: 121 GKGFSGSIKRHNQSEGPKSHG-SRYHRRPGSM---GPIKGKIKGKKLPGQMGHQTVTLQN 176

Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           L++ S+D ++ L L+KG +PG +K  +++++ + K+ + 
Sbjct: 177 LKINSIDHEQELFLIKGSIPGPRKG-FVMIKTAIKTVIK 214


>gi|227509931|ref|ZP_03939980.1| 50S ribosomal protein L3 [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227512864|ref|ZP_03942913.1| 50S ribosomal protein L3 [Lactobacillus buchneri ATCC 11577]
 gi|227522992|ref|ZP_03953041.1| 50S ribosomal protein L3 [Lactobacillus hilgardii ATCC 8290]
 gi|227083864|gb|EEI19176.1| 50S ribosomal protein L3 [Lactobacillus buchneri ATCC 11577]
 gi|227089810|gb|EEI25122.1| 50S ribosomal protein L3 [Lactobacillus hilgardii ATCC 8290]
 gi|227190537|gb|EEI70604.1| 50S ribosomal protein L3 [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 211

 Score =  207 bits (528), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 76/212 (35%), Positives = 113/212 (53%), Gaps = 5/212 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ +K+GMT V+   G  +PVTV+ +    ++  +T + +GY AVQ+G  + +    
Sbjct: 3   RKGILGKKVGMTQVFTENGELVPVTVVEVTPNVIMQIKTAENDGYDAVQLGYADKRAVLT 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP +G     N +PK+ + E +   +     V        F  G +VDVTG T G G+ 
Sbjct: 63  NKPEQGHAKKANTTPKRFIKEIK-DVELGDYKVAEEVKADIFKPGDIVDVTGTTKGHGYQ 121

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G + +        THG S  HR  GS G      RV    K+ GRMG   VT++NLEVVS
Sbjct: 122 GNIHKDGQSRGPETHG-SRYHRRPGSLGVI--INRVVPGMKLPGRMGNKTVTIQNLEVVS 178

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
            D+   +IL+KG VPGA K S+I +R + + A
Sbjct: 179 TDNDNNVILIKGNVPGANK-SFITIRTAVRGA 209


>gi|286142684|gb|ADC41372.1| ribosomal protein L3 [Streptomyces californicus]
 gi|286142700|gb|ADC41380.1| ribosomal protein L3 [Streptomyces vinaceus]
 gi|286142714|gb|ADC41387.1| ribosomal protein L3 [Streptomyces floridae]
 gi|286142746|gb|ADC41403.1| ribosomal protein L3 [Streptomyces sp. CB157]
 gi|286142798|gb|ADC41429.1| ribosomal protein L3 [Streptomyces puniceus]
          Length = 167

 Score =  207 bits (527), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 75/168 (44%), Positives = 100/168 (59%), Gaps = 1/168 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+    C V   RT D +GY AVQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   + + F  G  VDVTG + GKGF+G MKRHNF G 
Sbjct: 61  DVTPRRHLVELR-TPDASEYTLGQEVTAAVFESGVKVDVTGKSKGKGFAGVMKRHNFKGG 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +A+HG    HR  GS G    PGRVFK  +MAGRMG  RVT +NL + 
Sbjct: 120 KASHGAHRVHRMPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIH 167


>gi|71276484|ref|ZP_00652759.1| Ribosomal protein L3 [Xylella fastidiosa Dixon]
 gi|71162661|gb|EAO12388.1| Ribosomal protein L3 [Xylella fastidiosa Dixon]
          Length = 186

 Score =  206 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 86/186 (46%), Positives = 114/186 (61%), Gaps = 2/186 (1%)

Query: 27  VLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ 86
           ++     +VV  +T D +GY A+QV  G  +   V+KP  G F+   V   + L+EFRV+
Sbjct: 1   LIEATANRVVQIKTSDVDGYDAIQVTVGSRRSVLVNKPESGHFAKAKVEAGRGLWEFRVE 60

Query: 87  KDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145
           K       VGS    S F VGQ VD+ G+T GKGF G +KRHNF    ATHG S+SHR+ 
Sbjct: 61  KTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGFQGTIKRHNFRMGDATHGNSLSHRAP 120

Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWIL 205
           GS G RQ PGRVF  KKM+G MG  R +V+NLEV+ +D +R LI V+G +PGA     +L
Sbjct: 121 GSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEVIKIDVERFLIAVRGAIPGASGGD-VL 179

Query: 206 VRDSFK 211
           +R + K
Sbjct: 180 IRSASK 185


>gi|293977931|ref|YP_003543361.1| 50S ribosomal protein L3P [Candidatus Sulcia muelleri DMIN]
 gi|292667862|gb|ADE35497.1| LSU ribosomal protein L3P [Candidatus Sulcia muelleri DMIN]
          Length = 206

 Score =  206 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 79/206 (38%), Positives = 129/206 (62%), Gaps = 5/206 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ + +GMT +Y+  G  +P +++    C V+  +T +K+GY + Q+G  E K KN +
Sbjct: 2   SGIIGKNIGMTSMYDESGFNVPCSIIEAGPCIVLQIKTKEKDGYDSCQLGFDEKKYKNTN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+  FF     +PKKK+FEF ++ +   +  G++   ++F   +LV++TG + GKGF G
Sbjct: 62  KPLLFFFKKFKSTPKKKIFEFPIKGN---IKSGNIIKLNFFHENELVNITGFSKGKGFQG 118

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH F G    +HG     R+ GS G   DP RVFK  +MAGRMG  +VT+KN +++ 
Sbjct: 119 VVKRHGFSGVGERSHGQHNRSRAPGSIGAGSDPSRVFKGTRMAGRMGNKKVTLKNRKILK 178

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           +D     +++KG VPGA KNS+++++
Sbjct: 179 IDLLNNFLIIKGSVPGA-KNSYLIIK 203


>gi|286142694|gb|ADC41377.1| ribosomal protein L3 [Streptomyces griseobrunneus]
 gi|286142698|gb|ADC41379.1| ribosomal protein L3 [Streptomyces bacillaris]
 gi|286142710|gb|ADC41385.1| ribosomal protein L3 [Kitasatospora mediocidica]
 gi|286142716|gb|ADC41388.1| ribosomal protein L3 [Streptomyces roseochromogenes]
          Length = 167

 Score =  206 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 77/168 (45%), Positives = 99/168 (58%), Gaps = 1/168 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+    C V   RT D +GY AVQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPCVVTQVRTNDNDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVELR-TPDASEYTLGQEVTADVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL + 
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIH 167


>gi|71029452|ref|XP_764369.1| 60S ribosomal protein L3 [Theileria parva strain Muguga]
 gi|68351323|gb|EAN32086.1| 60S ribosomal protein L3, putative [Theileria parva]
          Length = 347

 Score =  206 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 83/210 (39%), Positives = 119/210 (56%), Gaps = 4/210 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           RSGV+A K+G   +++  G R  VTV H+D C V+  RT++KNGY A+Q+G G   +K  
Sbjct: 88  RSGVLAYKIGCMSLWDDWGVRHAVTVCHVDRCVVLEKRTIEKNGYEALQLGLGYKNIKQQ 147

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SKP  G F  +    K  + EF+   D  LLP G  FS  +FT GQ V V+G +  KGF 
Sbjct: 148 SKPNIGRFIKLGTGSKNHIAEFKCSSDC-LLPEGHYFSVRHFTPGQWVFVSGWSKAKGFK 206

Query: 122 GAMKRHNFGGLRATHGVS-ISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           GAM+R +FGG   +HG    +H + GS    +    V++N KM G +G +   V N  V 
Sbjct: 207 GAMRRWSFGGQNQSHGTECKAHSAPGSISQGKSVHIVWRNTKMGGHVGPDPR-VTNCRVF 265

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
            ++  R LI +KG +PG +  S + +RD+ 
Sbjct: 266 RIETHRNLIFLKGAIPG-EIGSVVKIRDAL 294


>gi|255348905|ref|ZP_05380912.1| 50S ribosomal protein L3 [Chlamydia trachomatis 70]
 gi|255503445|ref|ZP_05381835.1| 50S ribosomal protein L3 [Chlamydia trachomatis 70s]
 gi|255507124|ref|ZP_05382763.1| 50S ribosomal protein L3 [Chlamydia trachomatis D(s)2923]
 gi|289525573|emb|CBJ15051.1| LSU ribosomal protein L3P [Chlamydia trachomatis Sweden2]
 gi|296435133|gb|ADH17311.1| 50S ribosomal protein L3 [Chlamydia trachomatis E/150]
 gi|296438853|gb|ADH21006.1| 50S ribosomal protein L3 [Chlamydia trachomatis E/11023]
          Length = 221

 Score =  206 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 82/218 (37%), Positives = 113/218 (51%), Gaps = 11/218 (5%)

Query: 1   MRSGV--VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK- 57
           MRS +  + +K GM  V++  G  +  +V+ +D   V   +T   +GY AVQ+GA   + 
Sbjct: 1   MRSQLSLIGKKEGMMHVFDKNGNLVACSVISVDANVVAQLKTASSDGYNAVQMGADVVQA 60

Query: 58  -----VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
                 K  SK + G F        + L E  V ++    + +G  F    F     VD+
Sbjct: 61  PEKTIEKRFSKALLGHFKKSGGRACRVLKEVVVSEEAVQSVSLGDEFGLEIFDGVSNVDI 120

Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
            G++ GKGF G MK+  F G   +HG S  HR  GSTG R  PGR F   K    MG +R
Sbjct: 121 CGISKGKGFQGVMKKFGFRGGPKSHG-SGFHRHAGSTGMRSTPGRCFPGSKRPSHMGCDR 179

Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           VTVKNLEVV VD  R ++LVKG +PG  K S ++V+ S
Sbjct: 180 VTVKNLEVVKVDLDRKVMLVKGAIPG-FKGSVVVVKRS 216


>gi|168034315|ref|XP_001769658.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679007|gb|EDQ65459.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 223

 Score =  206 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 77/209 (36%), Positives = 110/209 (52%), Gaps = 3/209 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
            G++  K+GM   +  +G  +P TV+   +   V   +T   +GY AVQVG    + + +
Sbjct: 8   VGLMGTKMGMMTYFTEDGIAVPCTVVGFHEGNIVTQVKTDATDGYTAVQVGYRRVRDRKL 67

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G  + V   P + L EFRV   +   P   +     F  G L+DV G +IGKGF 
Sbjct: 68  TKPQLGHLNKVGAIPMRHLQEFRVVSAEGFEPNQRLQLEEMFKAGDLIDVVGDSIGKGFQ 127

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR+NF   + THG S S R  GS G    PGRV+  KKM G+MG  R  V+ LE+V 
Sbjct: 128 GGIKRYNFARGQMTHG-SKSKRQLGSIGAGTTPGRVYPGKKMPGQMGSGRTKVRKLEIVK 186

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           VD +   +L+KG VPG   N  + +  + 
Sbjct: 187 VDPELRAVLIKGSVPGKPGN-LLRITPAK 214


>gi|84997293|ref|XP_953368.1| 50S ribosomal protein L3 [Theileria annulata strain Ankara]
 gi|65304364|emb|CAI76743.1| 50S ribosomal protein L3, putative [Theileria annulata]
          Length = 347

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 81/210 (38%), Positives = 118/210 (56%), Gaps = 4/210 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           RSGV+A K+G   +++  G R  VTV  +D C V+  RT++K+GY A+Q+G G   +K  
Sbjct: 88  RSGVLAYKIGCMSLWDDWGVRHAVTVCQVDRCVVLEKRTIEKHGYEALQLGLGYKNIKQQ 147

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SKP  G F  +    K  + EF+   D  LLP G  FS  +FT GQ V V+G +  KGF 
Sbjct: 148 SKPNIGRFIKLGTGSKNHIAEFKCSSD-CLLPEGHYFSVRHFTPGQWVFVSGWSKAKGFK 206

Query: 122 GAMKRHNFGGLRATHGVS-ISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           GAM+R +FGG   +HG    +H + GS    +    V++N KM G +G +   V N  V 
Sbjct: 207 GAMRRWSFGGQNQSHGTECKAHSAPGSISQGKSVHIVWRNTKMGGHVGPDPR-VTNCRVF 265

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
            ++  R LI +KG +PG +  S + +RD+ 
Sbjct: 266 RIETHRNLIFLKGAIPG-EIGSVVKIRDAL 294


>gi|307189923|gb|EFN74159.1| 39S ribosomal protein L3, mitochondrial [Camponotus floridanus]
          Length = 370

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 65/231 (28%), Positives = 115/231 (49%), Gaps = 17/231 (7%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYM-------------- 47
           R+G++A+K+G+  ++  +G+++  T+L + + +VV +   +K   +              
Sbjct: 102 RTGLIAKKIGVYPLWLKDGKKVSSTLLQIVDNEVVKYMPPEKFHPVRSCKPPLQIKRRLG 161

Query: 48  AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
            + VGA     + V+K   G F    V PK+ L  F +  +  L P G+    ++F  G+
Sbjct: 162 CLVVGAENIDPQWVTKEYYGMFKDTGVIPKRVLRRFIISPEAALQP-GTPLIAAHFKPGE 220

Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
           +VD+   TI +GF G MKR  F G+ A+HGV+ +HR  G+ G      RV    KM G M
Sbjct: 221 IVDIRAKTIDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGRKARVMPGTKMPGHM 280

Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217
           G      +  +++ ++ K  +I +KG  +PG + NS+  + D+       K
Sbjct: 281 GNKWRVHRGQQILRINTKYNIIWIKGQNIPG-EINSYCHIYDTILPLRRHK 330


>gi|195133722|ref|XP_002011288.1| GI16081 [Drosophila mojavensis]
 gi|193907263|gb|EDW06130.1| GI16081 [Drosophila mojavensis]
          Length = 369

 Score =  206 bits (524), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 72/230 (31%), Positives = 110/230 (47%), Gaps = 15/230 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
           R GV+ARK+G   ++   G RI  T+L + +  V+ +   ++            N Y  V
Sbjct: 105 RCGVIARKIGQYPLWLKNGERIRTTLLQVVDNHVIKYIPPEEYKPTQRPNVHNLNRYGCV 164

Query: 50  QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
            VGA       ++K   G F    V P K L  F V     L P G+  +  +F VG+ V
Sbjct: 165 LVGAESTNPAQLTKEYCGIFRDSGVMPTKNLARFIVSPQAALAP-GTPLNVGHFRVGEFV 223

Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
           DV G T+  GF G +KRH F G+ A+HGV+ +HR  G+ G   + GRV+   K+ G MG 
Sbjct: 224 DVRGKTVYHGFQGVVKRHGFKGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKLPGHMGN 283

Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCKG 218
                K L +  ++ K  ++ V+G  VPG+  N  + + D+       + 
Sbjct: 284 RWRISKGLRIWRINTKYNVMWVQGSAVPGS-TNGLVYIYDTILPLRKPQA 332


>gi|283780374|ref|YP_003371129.1| 50S ribosomal protein L3 [Pirellula staleyi DSM 6068]
 gi|283438827|gb|ADB17269.1| ribosomal protein L3 [Pirellula staleyi DSM 6068]
          Length = 232

 Score =  205 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 86/233 (36%), Positives = 129/233 (55%), Gaps = 25/233 (10%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT +Y+  G  IPVTV+    C+V+  +TL+++GY AVQ+G  +   + 
Sbjct: 1   MTKGILGRKVGMTQIYDEAGNAIPVTVVEAGPCRVLQLKTLERDGYEAVQLGFLDKPRRL 60

Query: 61  VSKPMRGFFSSVN-------------------VSPKKKLFEFRVQKDDDLLPVGSVFSPS 101
            S+  RG  +++                      PK+ + EFR   D     VG   +  
Sbjct: 61  ASRSERGHVAALESKRAKRRAAAGVVAVAKAACEPKRFVREFRGSADG--FTVGQDVTVE 118

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP---GRVF 158
                + VDVTG++ G+GFSGAMKRHNF G RATHGV   HR  G TG        GR+ 
Sbjct: 119 ALEGVKAVDVTGISKGRGFSGAMKRHNFAGQRATHGVKKVHRHMGGTGALASNRGGGRMK 178

Query: 159 KNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           K KKM G+ G  R+T +N+++V VD +  L+L+ G VPG +  + +++R++ K
Sbjct: 179 KGKKMPGQYGSARITTRNIKLVRVDKENNLLLINGPVPGPQ-GAMVIIRETNK 230


>gi|258620527|ref|ZP_05715565.1| 50S ribosomal protein L3 [Vibrio mimicus VM573]
 gi|258587406|gb|EEW12117.1| 50S ribosomal protein L3 [Vibrio mimicus VM573]
          Length = 167

 Score =  205 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 72/161 (44%), Positives = 100/161 (62%), Gaps = 1/161 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY A+QV AG  K   V+
Sbjct: 2   IGLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+   V   + L+EFR++  ++   VGS  +   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFAKAGVEAGRGLWEFRLENGEE-FAVGSELTVELFNEVKKVDVTGTSKGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KK+
Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKI 161


>gi|330444113|ref|YP_004377099.1| 50S ribosomal protein L3 [Chlamydophila pecorum E58]
 gi|328807223|gb|AEB41396.1| ribosomal protein L3 [Chlamydophila pecorum E58]
          Length = 215

 Score =  205 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 72/215 (33%), Positives = 116/215 (53%), Gaps = 9/215 (4%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK----- 59
           ++ +K GM  V++ +G  +  +V+ ++   V   +TL+K+GY ++Q+G+G+         
Sbjct: 3   LMGKKEGMLHVFDKDGSLVACSVISIEPNVVTQIKTLEKDGYTSLQMGSGKESAPLKTLQ 62

Query: 60  -NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
              +K   G          + L E RV ++      +G+ F    F     VDV+G++ G
Sbjct: 63  KRYTKAKLGHLKKSRDQVFRVLKEVRVSEEVIGSTSLGAAFGIEVFEGVGAVDVSGVSKG 122

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF G MK++ F G   +HG S  HR  GS G R  PGR F   K    MG   VT+KNL
Sbjct: 123 KGFQGVMKKYGFRGGPGSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGSENVTIKNL 181

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           EV+ +D +R ++LVKG +PG+ K S ++V+ S ++
Sbjct: 182 EVIKIDLERKVLLVKGAIPGS-KGSVVVVKRSSRA 215


>gi|15605257|ref|NP_220043.1| 50S ribosomal protein L3 [Chlamydia trachomatis D/UW-3/CX]
 gi|76789265|ref|YP_328351.1| 50S ribosomal protein L3 [Chlamydia trachomatis A/HAR-13]
 gi|237802957|ref|YP_002888151.1| 50S ribosomal protein L3 [Chlamydia trachomatis B/Jali20/OT]
 gi|237804879|ref|YP_002889033.1| 50S ribosomal protein L3 [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255311346|ref|ZP_05353916.1| 50S ribosomal protein L3 [Chlamydia trachomatis 6276]
 gi|255317647|ref|ZP_05358893.1| 50S ribosomal protein L3 [Chlamydia trachomatis 6276s]
 gi|7674297|sp|O84533|RL3_CHLTR RecName: Full=50S ribosomal protein L3
 gi|109893421|sp|Q3KLG9|RL3_CHLTA RecName: Full=50S ribosomal protein L3
 gi|3328965|gb|AAC68129.1| L3 Ribosomal Protein [Chlamydia trachomatis D/UW-3/CX]
 gi|76167795|gb|AAX50803.1| LSU ribosomal protein L3P [Chlamydia trachomatis A/HAR-13]
 gi|231273179|emb|CAX10092.1| LSU ribosomal protein L3P [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231274191|emb|CAX10985.1| LSU ribosomal protein L3P [Chlamydia trachomatis B/Jali20/OT]
 gi|296436061|gb|ADH18235.1| 50S ribosomal protein L3 [Chlamydia trachomatis G/9768]
 gi|296436989|gb|ADH19159.1| 50S ribosomal protein L3 [Chlamydia trachomatis G/11222]
 gi|296437922|gb|ADH20083.1| 50S ribosomal protein L3 [Chlamydia trachomatis G/11074]
 gi|297140422|gb|ADH97180.1| 50S ribosomal protein L3 [Chlamydia trachomatis G/9301]
 gi|297748658|gb|ADI51204.1| LSU ribosomal protein L3P [Chlamydia trachomatis D-EC]
 gi|297749538|gb|ADI52216.1| LSU ribosomal protein L3P [Chlamydia trachomatis D-LC]
          Length = 221

 Score =  205 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 82/218 (37%), Positives = 113/218 (51%), Gaps = 11/218 (5%)

Query: 1   MRSGV--VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK- 57
           MRS +  + +K GM  V++  G  +  +V+ +D   V   +T   +GY AVQ+GA   + 
Sbjct: 1   MRSQLSLIGKKEGMMHVFDKNGNLVACSVISVDANVVAQLKTASSDGYNAVQMGADVVQA 60

Query: 58  -----VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
                 K  SK + G F        + L E  V ++    + +G  F    F     VD+
Sbjct: 61  PEKTIEKRFSKALLGHFKKSGGRVCRVLKEVVVSEEAVQSVSLGDEFGLEIFDGVSNVDI 120

Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
            G++ GKGF G MK+  F G   +HG S  HR  GSTG R  PGR F   K    MG +R
Sbjct: 121 CGISKGKGFQGVMKKFGFRGGPKSHG-SGFHRHAGSTGMRSTPGRCFPGSKRPSHMGCDR 179

Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           VTVKNLEVV VD  R ++LVKG +PG  K S ++V+ S
Sbjct: 180 VTVKNLEVVKVDLDRKVMLVKGAIPG-FKGSVVVVKRS 216


>gi|286142602|gb|ADC41331.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142606|gb|ADC41333.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142612|gb|ADC41336.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142614|gb|ADC41337.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142616|gb|ADC41338.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142660|gb|ADC41360.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142662|gb|ADC41361.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142664|gb|ADC41362.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142668|gb|ADC41364.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142672|gb|ADC41366.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142674|gb|ADC41367.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142676|gb|ADC41368.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142678|gb|ADC41369.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142680|gb|ADC41370.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142682|gb|ADC41371.1| ribosomal protein L3 [Streptomyces sp. DSM 40932]
 gi|286142688|gb|ADC41374.1| ribosomal protein L3 [Streptomyces anulatus]
 gi|286142690|gb|ADC41375.1| ribosomal protein L3 [Streptomyces reticuli]
 gi|286142750|gb|ADC41405.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142752|gb|ADC41406.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142762|gb|ADC41411.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142764|gb|ADC41412.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142770|gb|ADC41415.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142772|gb|ADC41416.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142774|gb|ADC41417.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142776|gb|ADC41418.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142778|gb|ADC41419.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142780|gb|ADC41420.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142790|gb|ADC41425.1| ribosomal protein L3 [Streptomyces sp. E1002]
          Length = 167

 Score =  205 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 77/168 (45%), Positives = 99/168 (58%), Gaps = 1/168 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+    C V   RT D +GY AVQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVELR-TPDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL + 
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIH 167


>gi|255085138|ref|XP_002505000.1| ribosomal protein L3, chloroplast precursor [Micromonas sp. RCC299]
 gi|226520269|gb|ACO66258.1| ribosomal protein L3, chloroplast precursor [Micromonas sp. RCC299]
          Length = 276

 Score =  205 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 80/209 (38%), Positives = 112/209 (53%), Gaps = 5/209 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLD-NCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
            GV   K GMT ++  EG  IPV+V+ +     V   +T+D +GY AVQV   E     +
Sbjct: 66  VGVFGNKAGMTQIFTDEGLCIPVSVIAVQKGNVVTQVKTVDTDGYNAVQVAYDEVADYKI 125

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G  +   V+P + L EFR+ +         +     FT G LVDV G +IGKG+ 
Sbjct: 126 TKPEVGHCAKAGVAPMRHLEEFRLAQAPAHELGQQLKPSEMFTAGDLVDVRGASIGKGWQ 185

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           GA+K++ F     THG S SHR HGS G    PGR++  KKM  +MG   VT + L+VV 
Sbjct: 186 GAVKKYGFSRGLMTHG-SKSHRQHGSVGAGTTPGRIYPGKKMHSQMGNETVTARKLKVVK 244

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           V  +   I+VKG VPG + N  + +  + 
Sbjct: 245 V--EDDCIIVKGSVPGKRGN-LLRIAPAK 270


>gi|28493521|ref|NP_787682.1| 50S ribosomal protein L3 [Tropheryma whipplei str. Twist]
 gi|28572367|ref|NP_789147.1| 50S ribosomal protein L3 [Tropheryma whipplei TW08/27]
 gi|42559617|sp|Q83FY6|RL3_TROWT RecName: Full=50S ribosomal protein L3
 gi|42559618|sp|Q83I78|RL3_TROW8 RecName: Full=50S ribosomal protein L3
 gi|28410498|emb|CAD66884.1| 50S ribosomal protein L3 [Tropheryma whipplei TW08/27]
 gi|28476563|gb|AAO44651.1| 50S ribosomal protein L3 [Tropheryma whipplei str. Twist]
          Length = 210

 Score =  205 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 84/213 (39%), Positives = 123/213 (57%), Gaps = 9/213 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDN-CQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           M   ++  K+GMT +++  GRR+            V   +  +K+GY  +Q+  G    +
Sbjct: 1   MARALLGTKVGMTQIWS--GRRVVPVTAVAVTTNVVSQVKAPEKDGYSRLQIATGAIDPR 58

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            V++P +G F+   ++P++ + E      D    +G  F P  F  GQLVDV G + GKG
Sbjct: 59  RVNRPRKGHFAKAGLTPRRFIREV-----DSEGSLGDEFGPEIFQEGQLVDVVGKSKGKG 113

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           FSG MKRHNF G+ ATHG   +HR  GS G    P RVFK  +MAGR+G +RVTV NL +
Sbjct: 114 FSGTMKRHNFQGVSATHGSHRNHRKPGSVGASSTPSRVFKGTRMAGRLGSSRVTVHNLRL 173

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           V +D + GL+LV+G VPG+   S +++RD+ K 
Sbjct: 174 VKIDSENGLLLVEGAVPGSS-GSPVIIRDAVKG 205


>gi|322799942|gb|EFZ21068.1| hypothetical protein SINV_02593 [Solenopsis invicta]
          Length = 366

 Score =  205 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 64/237 (27%), Positives = 117/237 (49%), Gaps = 21/237 (8%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQ----------- 50
           R+G++A+K+G+  ++   G+++  T+L + + +VV +   +K  Y  V+           
Sbjct: 99  RTGLIAKKIGVYPLWLKNGKKVTSTLLQIVDNEVVKYIPPEK--YNPVKSKRPPIQVKKR 156

Query: 51  -----VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105
                VGA     + ++K     F+   V PK+ L  F +  +  L P G+    ++F  
Sbjct: 157 RGCLVVGAENINPQLITKEYYSIFNDTGVMPKRVLRRFVISPEAALQP-GTPLFATHFKP 215

Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
           G++VD+ G T+ +GF G MKR  F G  A+HG + +HR  G+ G      RV    KM G
Sbjct: 216 GEVVDIRGKTVDRGFQGVMKRWGFHGQPASHGQTKTHRRPGNIGSGGTKARVMPGTKMPG 275

Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCKGKVS 221
            MG     ++ + ++ ++ K  +I V G  +PG + N+++ + D+       K K +
Sbjct: 276 HMGNRWRILRGVRILRINTKYNVIWVLGHNLPG-ETNNYVYMYDTLLPLRQFKTKPN 331


>gi|286142754|gb|ADC41407.1| ribosomal protein L3 [Streptomyces sp. CB169]
 gi|286142756|gb|ADC41408.1| ribosomal protein L3 [Streptomyces sp. CB170]
          Length = 167

 Score =  205 bits (522), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 77/168 (45%), Positives = 101/168 (60%), Gaps = 1/168 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+    C V   RT D +GY +VQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNFGGL
Sbjct: 61  DVTPRRHLVEIRTS-DASEYTLGQELTAETFESGVKVDVTGKSKGKGFAGVMKRHNFGGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            ++HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V 
Sbjct: 120 GSSHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167


>gi|51244976|ref|YP_064860.1| 50S ribosomal protein L3 [Desulfotalea psychrophila LSv54]
 gi|81826871|sp|Q6AP71|RL3_DESPS RecName: Full=50S ribosomal protein L3
 gi|50876013|emb|CAG35853.1| probable 50S ribosomal protein L3 [Desulfotalea psychrophila LSv54]
          Length = 209

 Score =  205 bits (521), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 82/208 (39%), Positives = 110/208 (52%), Gaps = 4/208 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
             G++ + +GMT VY   G+ IPVTV+    C+V+  +T   +GY AVQVG    K   V
Sbjct: 4   TMGILGKNIGMTRVYGEVGQAIPVTVVQAGPCKVLQVKTNATDGYNAVQVGFENKKSSRV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGF 120
           +K   G F+  +      + EFRV  D     VG + S    F  G +VDV G + G+GF
Sbjct: 64  NKAEAGHFAKSDSEGFYFVREFRVV-DPATYNVGDMISVDALFKAGDIVDVQGTSKGRGF 122

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G +KR  F G       S  HR+ GS GC   PGRV K KKM GRMG + V  KN+ VV
Sbjct: 123 QGVIKRWGFKGGPGG-HGSKHHRAPGSIGCSAYPGRVVKGKKMPGRMGNDTVLKKNVTVV 181

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
            V     ++L+KG +PGA KN  + +  
Sbjct: 182 DVRIDENVVLLKGPMPGA-KNGLLKIYS 208


>gi|286142594|gb|ADC41327.1| ribosomal protein L3 [Streptomyces platensis]
          Length = 167

 Score =  205 bits (521), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 74/168 (44%), Positives = 99/168 (58%), Gaps = 1/168 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+    C V   RT D++GY +VQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPCVVTQVRTNDQDGYDSVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRH F G 
Sbjct: 61  DVTPRRHLVEVR-TADAGEYTLGQELTAETFESGVKVDVTGKSKGKGFAGVMKRHGFHGG 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +A+HG    HR  GS G    PGRVFK  +MAGRMG  RVT +NL V 
Sbjct: 120 KASHGAHRVHRKPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTVH 167


>gi|286142608|gb|ADC41334.1| ribosomal protein L3 [Streptomyces platensis]
          Length = 167

 Score =  205 bits (521), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 74/168 (44%), Positives = 99/168 (58%), Gaps = 1/168 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+    C V   RT D++GY +VQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPCVVTQVRTNDQDGYDSVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRH F G 
Sbjct: 61  DVTPRRHLVEVRTT-DAGEYTLGQELTAETFESGVKVDVTGKSKGKGFAGVMKRHGFHGG 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +A+HG    HR  GS G    PGRVFK  +MAGRMG  RVT +NL V 
Sbjct: 120 KASHGAHRVHRKPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTVH 167


>gi|156553318|ref|XP_001600461.1| PREDICTED: similar to Mitochondrial 39S ribosomal protein L3
           [Nasonia vitripennis]
          Length = 375

 Score =  205 bits (521), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 14/230 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQ----------- 50
           R GV+ARK+G+  ++  +G+++  T+  + +  V+ +   ++   M  Q           
Sbjct: 105 RVGVLARKIGIVPMWMKDGKKVLTTMFQVADNHVIKYIPPEEYKPMITQKKNPLPRNTGC 164

Query: 51  --VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQL 108
             VGA     +  +K   G F+   V PK+ L  F V  +  L P G+    +++ +GQ 
Sbjct: 165 LLVGADSCDPQLFTKEYCGLFNEAGVMPKRLLARFHVSPEGALQP-GTPLFATHYKIGQY 223

Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
           +D+ G TI +GF G MKR  F G+ A+HGV+ +HR  G+ G      RV    K+ G MG
Sbjct: 224 IDIRGKTIDRGFQGVMKRWGFHGMPASHGVTKTHRRPGNIGSGGKKARVMPGTKLPGHMG 283

Query: 169 GNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
                VK   +V ++ +  +I V G     + NS +   D+      CK 
Sbjct: 284 NRYRIVKAQRIVRINTRYNVIWVLGQASAGETNSLVQFYDTIVPLKTCKA 333


>gi|286142802|gb|ADC41431.1| ribosomal protein L3 [Streptomyces mashuensis]
          Length = 167

 Score =  204 bits (520), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 77/168 (45%), Positives = 99/168 (58%), Gaps = 1/168 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+    C V   RT D +GY +VQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPCIVTQVRTNDTDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVEIR-TADASEYTLGQELTAEVFEAGVKVDVTGKSKGKGFAGVMKRHNFRGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V 
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167


>gi|313847648|emb|CBY16636.1| putative 50s ribosomal protein [Chlamydophila psittaci RD1]
 gi|325507077|gb|ADZ18715.1| 50S ribosomal protein L3 [Chlamydophila psittaci 6BC]
 gi|328914285|gb|AEB55118.1| ribosomal protein L3 [Chlamydophila psittaci 6BC]
          Length = 221

 Score =  204 bits (520), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 75/209 (35%), Positives = 110/209 (52%), Gaps = 10/209 (4%)

Query: 1   MRSGV--VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58
           MRS +  + +K GM  V++ +G  +  +V+ + +  V   +    +GY A+Q+GA E  V
Sbjct: 1   MRSQLSLMGKKEGMIHVFDKDGNLVACSVISMSSNVVTQIKVDSTDGYNAIQMGANEINV 60

Query: 59  K------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
                   V+KP  G F        + L E R+ ++  + + +GS F    F     VD+
Sbjct: 61  PEKTLQKRVNKPSLGHFKKSGSRVFRSLKEVRLSEEAVNEVSLGSEFGLEVFESVSSVDI 120

Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
           +G++ GKGF G MKR  F G   +HG S  HR  GS G R  PGR F   K    MG   
Sbjct: 121 SGVSKGKGFQGVMKRFGFRGGPQSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGTVN 179

Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKK 200
           VTVKNLEV+ VD ++ ++LVKG +PG + 
Sbjct: 180 VTVKNLEVIKVDLEKKVLLVKGAIPGPRG 208


>gi|286142696|gb|ADC41378.1| ribosomal protein L3 [Streptomyces microflavus]
 gi|286142702|gb|ADC41381.1| ribosomal protein L3 [Streptomyces microflavus]
 gi|286142704|gb|ADC41382.1| ribosomal protein L3 [Streptomyces alboviridis]
 gi|286142706|gb|ADC41383.1| ribosomal protein L3 [Streptomyces microflavus]
 gi|286142712|gb|ADC41386.1| ribosomal protein L3 [Streptomyces albidus]
          Length = 167

 Score =  204 bits (520), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 78/168 (46%), Positives = 100/168 (59%), Gaps = 1/168 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+    C V   RT D +GY AVQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVELR-TPDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            A HGV   HRS GS G    PGRVFK  +MAGRMG  RVT +NL + 
Sbjct: 120 GAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIH 167


>gi|286142600|gb|ADC41330.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142604|gb|ADC41332.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142610|gb|ADC41335.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142666|gb|ADC41363.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142670|gb|ADC41365.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142708|gb|ADC41384.1| ribosomal protein L3 [Streptomyces albovinaceus]
 gi|286142720|gb|ADC41390.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142726|gb|ADC41393.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142730|gb|ADC41395.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142742|gb|ADC41401.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142744|gb|ADC41402.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142748|gb|ADC41404.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142760|gb|ADC41410.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142784|gb|ADC41422.1| ribosomal protein L3 [Streptomyces griseus]
          Length = 167

 Score =  204 bits (520), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 77/168 (45%), Positives = 100/168 (59%), Gaps = 1/168 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+    C V   RT D +GY AVQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   + + F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVELR-TPDASEYTLGQEVTAAVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL + 
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIH 167


>gi|254449111|ref|ZP_05062563.1| ribosomal protein L3 [gamma proteobacterium HTCC5015]
 gi|198261303|gb|EDY85596.1| ribosomal protein L3 [gamma proteobacterium HTCC5015]
          Length = 176

 Score =  204 bits (520), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 78/175 (44%), Positives = 103/175 (58%), Gaps = 2/175 (1%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVK 59
           M  G+V RK GMT V+  +G  +PVTV+     +V   ++ +  +GY ++QV  GE +  
Sbjct: 1   MAIGLVGRKAGMTRVFTEDGVSVPVTVIEAAPNRVTQVKSQEAADGYSSLQVTKGERRAS 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV-FSPSYFTVGQLVDVTGMTIGK 118
            V+KPM G ++   V     L+EFR++ ++              F  GQ VDV G +IGK
Sbjct: 61  RVTKPMAGHYAKAGVEAGDGLWEFRLEGEEGEGIEVGGELKVDLFEAGQKVDVIGTSIGK 120

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
           GF G +KRHNF    ATHG SISHR+ GSTG  Q PGRVFK K+MAG MG  RVT
Sbjct: 121 GFQGGIKRHNFRSQDATHGNSISHRAPGSTGQCQTPGRVFKGKRMAGHMGSKRVT 175


>gi|115444097|ref|NP_001045828.1| Os02g0137200 [Oryza sativa Japonica Group]
 gi|113535359|dbj|BAF07742.1| Os02g0137200 [Oryza sativa Japonica Group]
          Length = 274

 Score =  204 bits (520), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 116/211 (54%), Gaps = 5/211 (2%)

Query: 3   SGVVARKLGMTCVYNI-EGRRIPVTVLHL--DNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
            GV+A K+GM   ++   G+ +PVTV+        V   +T   +GY AVQVG    + +
Sbjct: 57  VGVMATKVGMMTYFDPATGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVREE 116

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            +++P  G        P + L EFR+Q  D   P   +     F  G LVD++G +IGKG
Sbjct: 117 KLTRPELGHLGKAGAPPLRHLQEFRLQSVDGYDPGQPLDFADMFKEGDLVDISGKSIGKG 176

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KRHNF     THG S SHR+ GS G    PGRV+K KKM GRMGG +  ++ L++
Sbjct: 177 FQGGIKRHNFKRGLMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKI 235

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           V +D+   ++++KG VPG   N  + +  + 
Sbjct: 236 VKIDNDLKVVMIKGAVPGKPGN-LLRIAPAK 265


>gi|227485525|ref|ZP_03915841.1| ribosomal protein L3 [Anaerococcus lactolyticus ATCC 51172]
 gi|227236524|gb|EEI86539.1| ribosomal protein L3 [Anaerococcus lactolyticus ATCC 51172]
          Length = 211

 Score =  204 bits (519), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 78/186 (41%), Positives = 109/186 (58%), Gaps = 1/186 (0%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           +   K+GMT V + +G   PVTVL  D   VV  +T D +GY A+QVG  + K KNV KP
Sbjct: 4   IFTTKVGMTQVIDEDGVITPVTVLKADENVVVQVKTTDVDGYNAIQVGTVDKKEKNVKKP 63

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           +RG +     S K+ L E  + ++   L  G   +   F  G+LVDV  ++ GKG  GA+
Sbjct: 64  IRGHYDKAGASYKRYLKEINLGEEVTELKAGDKITVDVFEEGELVDVVAISKGKGTQGAI 123

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR N+G   A+HG S SHR  G+     DP RVFK +K +G+MG  RVT++N++VV V+ 
Sbjct: 124 KRWNYGRGPASHG-SKSHRVAGARAAGSDPSRVFKGRKGSGKMGHERVTIQNVKVVKVNA 182

Query: 185 KRGLIL 190
           +   IL
Sbjct: 183 EDSYIL 188


>gi|326511938|dbj|BAJ95950.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326521546|dbj|BAK00349.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 264

 Score =  204 bits (519), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 77/211 (36%), Positives = 115/211 (54%), Gaps = 5/211 (2%)

Query: 3   SGVVARKLGMTCVYNI-EGRRIPVTVLHL--DNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
            GV+A K+GM   ++   G+ +PVTV+        V   +T   +GY AVQVG    +  
Sbjct: 47  VGVMATKVGMMTYFDPANGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVRED 106

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            +++P  G     +  P + L EFR+   D   P   +     F  G LVDV+  +IGKG
Sbjct: 107 KLTRPELGHLGKASAPPLRHLQEFRLVAVDAFDPGQELEFNELFKEGDLVDVSAKSIGKG 166

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G +KRHNF     THG S SHR+ GS G    PGRV+K KKM GRMGG +  ++ L++
Sbjct: 167 FQGGIKRHNFKRGLMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKI 225

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           V +D+   ++++KG +PG + N  + +  + 
Sbjct: 226 VRIDNDLKVVMIKGAIPGKQGN-LLRITPAK 255


>gi|331702080|ref|YP_004399039.1| 50S ribosomal protein L3 [Lactobacillus buchneri NRRL B-30929]
 gi|329129423|gb|AEB73976.1| 50S ribosomal protein L3 [Lactobacillus buchneri NRRL B-30929]
          Length = 211

 Score =  204 bits (519), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 71/209 (33%), Positives = 111/209 (53%), Gaps = 5/209 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++ +K+GMT V+   G  +PVTV+ +    ++  +T++ +GY +VQ+G  + +    
Sbjct: 3   RKGILGKKVGMTQVFTENGELVPVTVVEVTPNVIMQIKTVENDGYDSVQLGYADKRTVLT 62

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP +G     N +PK+ + E +   +     V        F  G +VDVTG T G G+ 
Sbjct: 63  NKPEQGHAKKANTTPKRFIKEIK-DVELGDYKVSDEVKADIFKPGDIVDVTGTTKGHGYQ 121

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G + +        THG S  HR  GS G      RV    K+ GRMG   VT++NLE+V+
Sbjct: 122 GNIHKDGQSRGPETHG-SRYHRRPGSLGVI--INRVVPGMKLPGRMGNKTVTIQNLEIVN 178

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
            D    ++L+KG VPGA K S+I +R + 
Sbjct: 179 ADTDNNVLLIKGNVPGANK-SYITIRSAV 206


>gi|62184737|ref|YP_219522.1| 50S ribosomal protein L3 [Chlamydophila abortus S26/3]
 gi|81313080|sp|Q5L720|RL3_CHLAB RecName: Full=50S ribosomal protein L3
 gi|62147804|emb|CAH63550.1| putative 50s ribosomal protein [Chlamydophila abortus S26/3]
          Length = 221

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 71/203 (34%), Positives = 108/203 (53%), Gaps = 8/203 (3%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK----- 59
           ++ +K GM  V++ +G  +  +V+ + +  V   +    +GY A+Q+GA E  V      
Sbjct: 7   LMGKKEGMIHVFDKDGNLVACSVISMSSNVVTQIKVDSTDGYNAIQMGANEINVPEKTLH 66

Query: 60  -NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
             V+KP  G F        ++L E R+ ++  + + +GS F    F     +DV+G++ G
Sbjct: 67  KRVNKPSIGHFKKSGSRVFRELKEVRLSEEAVNEVSLGSEFGLEVFESVSSIDVSGVSKG 126

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF G MKR  F G   +HG S  HR  GS G R  PGR F   K    MG   VTVKNL
Sbjct: 127 KGFQGVMKRFGFRGGPQSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGTVNVTVKNL 185

Query: 178 EVVSVDDKRGLILVKGCVPGAKK 200
           EV+ +D ++ ++LVKG +PG + 
Sbjct: 186 EVIKIDLEKKVLLVKGAIPGPRG 208


>gi|226226279|ref|YP_002760385.1| 50S ribosomal protein L3 [Gemmatimonas aurantiaca T-27]
 gi|226089470|dbj|BAH37915.1| 50S ribosomal protein L3 [Gemmatimonas aurantiaca T-27]
          Length = 227

 Score =  203 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 75/225 (33%), Positives = 107/225 (47%), Gaps = 22/225 (9%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RKLGMT ++N  G+++P TV+      V    T+D+ G+ +V++G G  +V   +
Sbjct: 2   IGIIGRKLGMTQLFNELGQQVPCTVVEATPNPVTKVSTVDQAGFASVELGFGAQRVARAN 61

Query: 63  K-------------PMRGFFSSVNVS-PKKKLFEFRVQKDDDLLP------VGSVFSPSY 102
           K                G      +  P   L  FR+       P       G   +   
Sbjct: 62  KKGERTPKGHRASKAEVGHAKKAGLDAPPAVLKSFRLDDAPGKNPEIPTYTPGDKITVDI 121

Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
           FT G+ V VTG + G+GF G +KRH F G   THG +  HR  GS G   DP RV K KK
Sbjct: 122 FTPGERVKVTGTSKGRGFQGVVKRHGFHGGPNTHGNTK-HRKPGSIGAGTDPSRVIKGKK 180

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVR 207
           M G+ G  + T  N+ +  VD +R LI ++G V G   N  + VR
Sbjct: 181 MPGQYGNTQHTALNIRIEKVDTERNLIYLRGSVAGP-TNGILFVR 224


>gi|195425857|ref|XP_002061179.1| GK10341 [Drosophila willistoni]
 gi|194157264|gb|EDW72165.1| GK10341 [Drosophila willistoni]
          Length = 375

 Score =  203 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 72/229 (31%), Positives = 111/229 (48%), Gaps = 15/229 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
           R GV+ARK+G   ++   G R+  T+L + +  V+ +   ++            + Y  +
Sbjct: 111 RCGVIARKIGQYPLWLKNGERVRTTLLQIVDNHVIKYTPPEEYQPSHRPSVHNLHKYGCL 170

Query: 50  QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
            VGA       ++K   G F    V PKK +  F V     L P G+  +  +F VG+ V
Sbjct: 171 LVGAESTNPALLTKEYCGIFRDSGVMPKKNVARFIVSPQAALAP-GTPLNVGHFRVGEFV 229

Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
           DV G T+  GF G +KRH F G+ A+HGV+ +HR  G+ G   + GRV+   KM G MG 
Sbjct: 230 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 289

Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217
                K L +  ++ K  ++ V+G  VPG+  N  I + D+       K
Sbjct: 290 RWRISKGLRIWRINTKYNVMWVQGSAVPGS-TNGLIYIYDTILPLRKPK 337


>gi|15829060|ref|NP_326420.1| 50S ribosomal protein L3 [Mycoplasma pulmonis UAB CTIP]
 gi|42559684|sp|Q98PY0|RL3_MYCPU RecName: Full=50S ribosomal protein L3
 gi|14090004|emb|CAC13762.1| 50S RIBOSOMAL PROTEIN L3 [Mycoplasma pulmonis]
          Length = 266

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 78/212 (36%), Positives = 117/212 (55%), Gaps = 6/212 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G++ RK+GMT +++  G  IPVT++ +    V    T +KNGY A+Q+   + K     
Sbjct: 2   KGILGRKVGMTQIFSDNGIVIPVTLIEVKPNIVSNVLTDEKNGYKAIQLSLEDKKKSRQR 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F+  N +PK+ + E R   D     +GS    S FT G+ VDVTG++ GKGF+G
Sbjct: 62  KPEIGHFAKANTTPKRFVKEIR---DMQGFELGSNVDVSIFTPGEFVDVTGISKGKGFAG 118

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180
            +KRHN      +HG     +    TG   D    +V K   M G +G  +VT++NLEV+
Sbjct: 119 TIKRHNQKIGPKSHGGGGGSKPVRQTGSLGDISGNKVVKGMTMPGHLGHEQVTIQNLEVI 178

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
             D K  ++LVKG VPG KK  ++++++  K 
Sbjct: 179 MTDVKNNILLVKGAVPGPKKG-FVVIKECAKK 209


>gi|156089107|ref|XP_001611960.1| 50S ribosomal protein L3 [Babesia bovis T2Bo]
 gi|154799214|gb|EDO08392.1| 50S ribosomal protein L3, putative [Babesia bovis]
          Length = 350

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 82/210 (39%), Positives = 113/210 (53%), Gaps = 4/210 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R GV+A KLG   +++  G R  VTV H+D C V+  RT+ ++GY AVQ+G G   +   
Sbjct: 91  RCGVLAYKLGCMSLWDDWGERHMVTVCHVDRCVVLEKRTIAEHGYEAVQLGLGYRNINRQ 150

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SK   G F    V  K  + EF+   D  LLPVG   S  +FT GQ V V+G +  KGF 
Sbjct: 151 SKQNIGRFIKAGVGSKDHIAEFKCSSD-CLLPVGHYMSVRHFTPGQWVFVSGWSQPKGFQ 209

Query: 122 GAMKRHNFGGLRATHGVS-ISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           GAM+R +FGG  A+HG    +H + GS    +    V++  KM G  G +   V N  V 
Sbjct: 210 GAMRRWHFGGQNASHGTECKAHSAPGSIAQGKSAHIVWRGTKMGGHKGPDPR-VTNCRVF 268

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
            ++  R LI +KG VPG    S + +RD+ 
Sbjct: 269 RIEAHRNLIFLKGTVPG-DVMSVLKIRDAL 297


>gi|94502245|ref|ZP_01308731.1| ribosomal protein L3 [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|161833819|ref|YP_001598015.1| 50S ribosomal subunit protein L3 [Candidatus Sulcia muelleri GWSS]
 gi|189029486|sp|A8Z668|RL3_SULMW RecName: Full=50S ribosomal protein L3
 gi|94451216|gb|EAT14155.1| ribosomal protein L3 [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|152206309|gb|ABS30619.1| 50S ribosomal subunit protein L3 [Candidatus Sulcia muelleri GWSS]
          Length = 206

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 78/206 (37%), Positives = 127/206 (61%), Gaps = 5/206 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ + +GMT +Y+  G  +P +++    C V+  +T +K+GY + Q+G  E K KN +
Sbjct: 2   SGIIGKNIGMTSMYDESGFNVPCSIIEAGPCIVLQIKTKEKDGYDSCQLGFDEKKYKNTN 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+  FF     +PKKK+FE  ++ +   +  G++   + F   +LV++TG + GKGF G
Sbjct: 62  KPLLFFFKKFKSTPKKKIFELPIKGN---IKSGNIIKLNCFHENELVNITGFSKGKGFQG 118

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH F G    +HG     R+ GS G   DP RVFK  +MAGRMG  +VT+KN +++ 
Sbjct: 119 VVKRHGFSGVGERSHGQHNRSRAPGSIGAGSDPSRVFKGTRMAGRMGNKKVTLKNRKILK 178

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           +D     +++KG VPGA KNS+++++
Sbjct: 179 IDLLNNFLIIKGSVPGA-KNSYLIIK 203


>gi|286142656|gb|ADC41358.1| ribosomal protein L3 [Streptomyces glaucescens]
          Length = 167

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 75/168 (44%), Positives = 98/168 (58%), Gaps = 1/168 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+      V   RT D +GY +VQ+  G+   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGDIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVEIRTS-DASEYTLGQEITAEVFEAGVKVDVTGKSKGKGFAGVMKRHNFRGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V 
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167


>gi|286142620|gb|ADC41340.1| ribosomal protein L3 [Streptomyces griseoruber]
          Length = 167

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 76/168 (45%), Positives = 98/168 (58%), Gaps = 1/168 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPNVVTQVRTNDADGYESVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVEIR-TADASEYTLGQEITAEVFEAGIKVDVTGKSKGKGFAGVMKRHNFKGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V 
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167


>gi|286142796|gb|ADC41428.1| ribosomal protein L3 [Streptomyces netropsis]
          Length = 167

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 77/168 (45%), Positives = 100/168 (59%), Gaps = 1/168 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+    C V   RT D +GY +VQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   + + F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVELR-TADASEYTLGQEITAAVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V 
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167


>gi|286142658|gb|ADC41359.1| ribosomal protein L3 [Streptomyces humidus]
          Length = 167

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 76/168 (45%), Positives = 98/168 (58%), Gaps = 1/168 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPNVVTQVRTNDSDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVEIR-TADAAEYTLGQEITAEVFEAGVKVDVTGKSKGKGFAGVMKRHNFKGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V 
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167


>gi|286142686|gb|ADC41373.1| ribosomal protein L3 [Streptomyces olivoviridis]
          Length = 167

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 77/168 (45%), Positives = 100/168 (59%), Gaps = 1/168 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+    C V   RT D +GY +VQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVELR-TPDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            A HGV   HRS GS G    PGRVFK  +MAGRMG  RVT +NL + 
Sbjct: 120 GAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIH 167


>gi|286142596|gb|ADC41328.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142598|gb|ADC41329.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142718|gb|ADC41389.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142722|gb|ADC41391.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142724|gb|ADC41392.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142728|gb|ADC41394.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142732|gb|ADC41396.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142734|gb|ADC41397.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142736|gb|ADC41398.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142738|gb|ADC41399.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142740|gb|ADC41400.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142758|gb|ADC41409.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142766|gb|ADC41413.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142768|gb|ADC41414.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142782|gb|ADC41421.1| ribosomal protein L3 [Streptomyces griseus]
 gi|286142786|gb|ADC41423.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142788|gb|ADC41424.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142792|gb|ADC41426.1| ribosomal protein L3 [Streptomyces limosus]
 gi|286142794|gb|ADC41427.1| ribosomal protein L3 [Streptomyces griseus]
          Length = 167

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 77/168 (45%), Positives = 98/168 (58%), Gaps = 1/168 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+      V   RT D +GY AVQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGANVVTQVRTNDTDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVEIR-TADASEYTLGQELNADTFEAGLKVDVTGKSKGKGFAGVMKRHNFKGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V 
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167


>gi|286142622|gb|ADC41341.1| ribosomal protein L3 [Streptomyces coelicolor]
 gi|286142624|gb|ADC41342.1| ribosomal protein L3 [Streptomyces coelescens]
 gi|286142626|gb|ADC41343.1| ribosomal protein L3 [Streptomyces violaceoruber]
 gi|286142628|gb|ADC41344.1| ribosomal protein L3 [Streptomyces sp. DSM 40419]
 gi|286142630|gb|ADC41345.1| ribosomal protein L3 [Streptomyces violaceolatus]
 gi|286142632|gb|ADC41346.1| ribosomal protein L3 [Streptomyces lividans]
 gi|286142634|gb|ADC41347.1| ribosomal protein L3 [Streptomyces sp. BTG 4-758]
 gi|286142636|gb|ADC41348.1| ribosomal protein L3 [Streptomyces sp. BTG 4-759]
 gi|286142638|gb|ADC41349.1| ribosomal protein L3 [Streptomyces sp. BTG 6-715]
 gi|286142640|gb|ADC41350.1| ribosomal protein L3 [Streptomyces sp. BTG 6-708]
 gi|286142642|gb|ADC41351.1| ribosomal protein L3 [Streptomyces sp. BTG 717 I]
 gi|286142644|gb|ADC41352.1| ribosomal protein L3 [Streptomyces coelicolor]
 gi|286142646|gb|ADC41353.1| ribosomal protein L3 [Streptomyces sp. BTG 723 I]
 gi|286142648|gb|ADC41354.1| ribosomal protein L3 [Streptomyces sp. BTG 4-723]
 gi|286142650|gb|ADC41355.1| ribosomal protein L3 [Streptomyces sp. BTG 4-738]
 gi|286142652|gb|ADC41356.1| ribosomal protein L3 [Streptomyces coelicolor]
 gi|286142654|gb|ADC41357.1| ribosomal protein L3 [Streptomyces violaceoruber]
          Length = 167

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 72/168 (42%), Positives = 96/168 (57%), Gaps = 1/168 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R         +G   +   F  G  VDVT  + GKGF+G MKRHNF G 
Sbjct: 61  DVTPRRHLVEIR-TAAASEYTLGQEITAEAFESGVKVDVTAKSKGKGFAGVMKRHNFKGG 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +A+HG    HR  GS G    PGRVFK  +MAGRMG  RVT +NL V 
Sbjct: 120 KASHGAHRVHRMPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTVH 167


>gi|286142804|gb|ADC41432.1| ribosomal protein L3 [Streptomyces galbus]
          Length = 167

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 76/168 (45%), Positives = 98/168 (58%), Gaps = 1/168 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVEIR-TADASEYTLGQEITAEVFEAGIKVDVTGKSKGKGFAGVMKRHNFKGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V 
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167


>gi|328781504|ref|XP_625054.3| PREDICTED: 39S ribosomal protein L3, mitochondrial [Apis mellifera]
          Length = 364

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 113/230 (49%), Gaps = 19/230 (8%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD--------------KNGYM 47
           R+G++ +K+G+  ++   GR++  T++ + + +VV +   +              KNG  
Sbjct: 101 RTGLIGKKIGVYPMWLKNGRKVLTTLIQIVDNEVVKYIPPEEYKPVKPIRHRIEVKNG-- 158

Query: 48  AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
            + +GA     + ++K   G F+   V+PKK L  F +  +  L P G+    ++F  G+
Sbjct: 159 CLVLGAINVDPQLLTKEYYGIFNKAGVTPKKVLMRFTISPNAVLQP-GTPLYATHFKPGE 217

Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
            +D+ G TI +GF G MKR  F G+ A+HGV+ +HR  G+ G      RV    KM G M
Sbjct: 218 FIDIRGKTIDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGKLARVMPGTKMPGHM 277

Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNC 216
           G     +K ++++ ++ K  +I V    VPG   N+   + D+       
Sbjct: 278 GNRWRILKGVKILRINTKYNVIWVLAQNVPGEL-NTMCYLYDTILPTKKS 326


>gi|321468355|gb|EFX79340.1| hypothetical protein DAPPUDRAFT_212601 [Daphnia pulex]
          Length = 374

 Score =  202 bits (514), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 72/230 (31%), Positives = 113/230 (49%), Gaps = 16/230 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMA------------- 48
           RSGV+AR +G   +++ +G +I  TVLH+ +  V+ +   ++    +             
Sbjct: 111 RSGVIARNIGRQQMWDKDGNKIVCTVLHVLDNHVIRYIPPEEYVKTSRGAIHFKNKTPLG 170

Query: 49  -VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
            + VGA     +  ++     F+ V + PKK L  F +  +  L P  +  +  +F VGQ
Sbjct: 171 CLVVGAEATNPEKFTRQYCNLFAEVGLMPKKTLSRFIITPNAALPPC-TPITAGHFLVGQ 229

Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
            VDV G T+  GF G +KR  F G  A+HG +  HR  G+ G  +D  RV+   KM G M
Sbjct: 230 AVDVYGKTVDHGFQGVVKRWGFKGGPASHGATKFHRRGGTIGTGRDKARVWPGTKMPGHM 289

Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           G  R   + L ++ ++ K  +I VKG VPGA  NS + + D+       K
Sbjct: 290 GSERRYNRGLMIMRINMKYNVIYVKGTVPGA-TNSIVRIFDTLLPLRKFK 338


>gi|239790528|dbj|BAH71819.1| ACYPI003905 [Acyrthosiphon pisum]
          Length = 375

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 74/232 (31%), Positives = 110/232 (47%), Gaps = 15/232 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTL-----DKNGYMA-------- 48
           R+G++ARKLG   ++   G+ +  T+L + +  V+ +         +  Y          
Sbjct: 109 RTGLIARKLGNYPMWLDNGKSVLSTLLQVIDNHVIKYIPPGEFNPPRKPYSCPNHKKPLG 168

Query: 49  -VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
            + VGA  A  +  +K   G F    + PKK L  F V  +  L P G+    S+F  G 
Sbjct: 169 CLLVGAESADPQYFTKQYCGLFYREGMMPKKYLGRFMVSPEAALQP-GTPLLASHFRPGD 227

Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
            +DV G TI +GF G MKRH F G+ ATHGV+ SHR  G+ G   + GR+F   KM G M
Sbjct: 228 FIDVRGKTIDRGFQGVMKRHGFHGMPATHGVTKSHRRGGNVGHGGEKGRIFPGTKMPGHM 287

Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
           G      K  E++ ++ K  +I +KG     K NS + + D+       K  
Sbjct: 288 GNRYRLHKGAEILRINHKYNVIWIKGIASPGKTNSIVYLYDTILPLRKHKSP 339


>gi|286142800|gb|ADC41430.1| ribosomal protein L3 [Streptomyces cinnamoneus]
          Length = 167

 Score =  201 bits (513), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 77/168 (45%), Positives = 100/168 (59%), Gaps = 1/168 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+    C V   RT D +GY +VQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPCVVTQVRTNDIDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   + + F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVELR-TADASEYTLGQEITAAVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V 
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167


>gi|307128705|ref|YP_003880735.1| 50S ribosomal protein L3 [Candidatus Sulcia muelleri CARI]
 gi|306483167|gb|ADM90037.1| 50S ribosomal protein L3 [Candidatus Sulcia muelleri CARI]
          Length = 206

 Score =  201 bits (512), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 81/206 (39%), Positives = 130/206 (63%), Gaps = 5/206 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           SG++ + +GMT +++  G  IP T++    C V+  +T +K+GY + Q+G  E K+ N +
Sbjct: 4   SGIIGKNIGMTSIFDESGCNIPCTIIEAGPCIVLQIKTKEKDGYDSCQLGFDEKKINNTN 63

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+ GFF  +  +PKKK+FEF ++K    +  G +   + F   + V++TG++ GKGF G
Sbjct: 64  KPLLGFFKKIKSTPKKKIFEFYIKK---KIKSGDLIKLNIFNENEYVNITGISKGKGFQG 120

Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
            +KRH F G    +HG     R+ GS G   DP RVFK  KMAGR+G  +VT+K ++++ 
Sbjct: 121 VVKRHGFSGVGEKSHGQHNRSRAPGSIGAGSDPSRVFKGTKMAGRLGNKKVTIKKIKILK 180

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207
           +D  + L++VKG VPG  KNS++++R
Sbjct: 181 IDLIKNLLIVKGSVPG-HKNSYLIIR 205


>gi|307297394|ref|ZP_07577200.1| 50S ribosomal protein L3 [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916654|gb|EFN47036.1| 50S ribosomal protein L3 [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 210

 Score =  201 bits (512), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 86/207 (41%), Positives = 120/207 (57%), Gaps = 7/207 (3%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN-- 60
            G++ RKLGMT +Y  +G+   VTV+    C VV  +T D   Y A+QVG  E   +   
Sbjct: 2   KGILGRKLGMTTIY-KDGKAFGVTVVKAGPCTVVQKKTSDGGEYDAIQVGFEELTPERAK 60

Query: 61  --VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
             ++KP+   F +  V P + L EF+V   +D   VG +     F+ G+ VDVTG + G+
Sbjct: 61  KVLTKPLVKKFEAAKVKPHRILKEFKVGNINDF-NVGDIIEARVFSEGEKVDVTGFSKGR 119

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GFSGAMKR NF G  A+HG S  HR  GS G   +P +++K KKM G+ G  + TVKNL 
Sbjct: 120 GFSGAMKRWNFRGGEASHG-SKFHRELGSVGNHTEPAKIWKGKKMPGQYGNEKKTVKNLT 178

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWIL 205
           VV VD + GL+ + G VPGA+    ++
Sbjct: 179 VVKVDAENGLLAIYGAVPGARGGLLVI 205


>gi|195478966|ref|XP_002100716.1| GE17217 [Drosophila yakuba]
 gi|194188240|gb|EDX01824.1| GE17217 [Drosophila yakuba]
          Length = 359

 Score =  201 bits (512), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 71/229 (31%), Positives = 111/229 (48%), Gaps = 15/229 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
           R GV+ARK+G   ++   G RI  T+L + +  V+ +   ++            +    +
Sbjct: 96  RCGVIARKIGQYPLWLKNGERIRTTLLQIADNHVIKYIPPEEYLPAQVPTVANLHKRGCI 155

Query: 50  QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
            VG+       ++K   G F +  V PKK L  F V  +  L P G+  S ++F +G  V
Sbjct: 156 LVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEAQLEP-GTPLSVNHFRIGDFV 214

Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
           DV G T+  GF G +KRH F G+ A+HGV+ +HR  G+ G   + GRV+   KM G MG 
Sbjct: 215 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 274

Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217
               +K L V  ++ K  ++ V+G  VPG      + + D+       K
Sbjct: 275 RWRKIKGLRVWRINSKYNVMWVQGSSVPGP-TGGLVYIYDTILPLRRNK 322


>gi|332028651|gb|EGI68685.1| 39S ribosomal protein L3, mitochondrial [Acromyrmex echinatior]
          Length = 271

 Score =  201 bits (511), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 118/224 (52%), Gaps = 17/224 (7%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-----NGYMAVQ------ 50
           R+G++A+K+G+  ++   G+++  T+L + + ++V +   +K     +   A+Q      
Sbjct: 3   RTGLIAKKIGVYPLWLKNGKKVNSTLLQVVDNEIVKYIPPEKFFPVKSKKPAIQIKNRRG 62

Query: 51  ---VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
              VGA     + ++K     F+   V+PK+ L  F V  +  L P G+    ++F  G+
Sbjct: 63  CLVVGAENIDPQLITKEYYNIFNDTGVTPKRVLRRFIVSPEAALQP-GTPLFATHFKPGE 121

Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
           +VD+ G TI +GF G MKR  F G+ A+HGV+ +HR  G+ G   +  RV    KM G M
Sbjct: 122 IVDIRGKTIDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKSRVMPGTKMPGHM 181

Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSF 210
           G     ++ + ++ ++ K  +I + G  +PG + N++  + D+ 
Sbjct: 182 GNRWRIIRGVRILRINTKYNVIWILGHNIPG-EINTYCYIYDTL 224


>gi|289614454|emb|CBI58738.1| unnamed protein product [Sordaria macrospora]
          Length = 365

 Score =  201 bits (511), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 96/218 (44%), Positives = 128/218 (58%), Gaps = 17/218 (7%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           +R+GV+A K GMT      G RIP TVL LD  Q+V ++T  KNGY AVQ+G  EAK   
Sbjct: 102 LRTGVLAVKKGMTVFMGKTGARIPCTVLQLDRVQIVANKTRAKNGYWAVQLGYYEAK--- 158

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
                        + PK+ L EF+V+  D LLPVG    P +F VGQ VDV G+T G GF
Sbjct: 159 ------------GIPPKQTLAEFKVRNQDGLLPVGVQLFPDWFHVGQRVDVRGITRGMGF 206

Query: 121 SGAMKRHNFGGLRATHGVSISHRSH-GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           +G MK+H F G  A+HG S +HR+     G +    RV   KKM GRMG  + TV+NL V
Sbjct: 207 AGGMKKHGFSGQEASHGNSKNHRTIGSVGGSQGSGSRVLPGKKMPGRMGAQQHTVQNLPV 266

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           + VD++ G+++VKG V G  K + + V+D+ K A   +
Sbjct: 267 LMVDNELGIVVVKGAVAG-HKGAVVKVQDAVKKAPPPE 303


>gi|87306538|ref|ZP_01088685.1| 50S ribosomal protein L3 [Blastopirellula marina DSM 3645]
 gi|87290717|gb|EAQ82604.1| 50S ribosomal protein L3 [Blastopirellula marina DSM 3645]
          Length = 217

 Score =  200 bits (510), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 72/217 (33%), Positives = 112/217 (51%), Gaps = 22/217 (10%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFS- 70
           MT V++  G  IPVTV+    C V+  ++ +++GY AVQ+G  +   +  ++  RG  + 
Sbjct: 1   MTQVFDESGNIIPVTVIEAGPCHVLQLKSQERDGYEAVQLGFDDKPRRLANRSERGQVAP 60

Query: 71  ------------------SVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
                               +  PK+ + E R     +   +G   S    +  + VD+ 
Sbjct: 61  LSSKRAKKLAAAGVEASAKPDCEPKRFVRELRGS--TEGFEIGQEVSVGVLSDVKAVDIV 118

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G + G+G++G MKRHNF G RATHGV   HR  G TGC   P R FK   M+G+ G  +V
Sbjct: 119 GTSKGRGYAGVMKRHNFAGQRATHGVKKVHRHTGGTGCSAYPSRTFKGLNMSGQYGNAKV 178

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           T +N++VV VD++  LILV G  PG     +++V+ +
Sbjct: 179 TQRNVKVVKVDEENNLILVYGAAPGPN-GGFVVVKAT 214


>gi|217073404|gb|ACJ85061.1| unknown [Medicago truncatula]
          Length = 243

 Score =  200 bits (510), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 76/189 (40%), Positives = 99/189 (52%), Gaps = 2/189 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
            GV+  KLGM   +   G  +PVTV+   +   V   +T   +GY AVQVG    + + +
Sbjct: 56  VGVMGTKLGMMSFFQPNGEVVPVTVVGFKEGNIVTQIKTDATDGYNAVQVGYRRVRDRKL 115

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G        P   L EFR+Q  D   P   +     F  G LVDV+G TIGKGF 
Sbjct: 116 TKPEMGHLEKAGAIPMHHLQEFRLQSVDGFEPNQRLVFDELFNEGDLVDVSGTTIGKGFQ 175

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNF     +HG S SHR  GS G    PGRV+K KKM GRMGG     + L++V 
Sbjct: 176 GGIKRHNFKRGPMSHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTNRKTRKLKIVK 234

Query: 182 VDDKRGLIL 190
           +D    +I+
Sbjct: 235 IDKDLNVIM 243


>gi|289740087|gb|ADD18791.1| mitochondrial ribosomal protein L3 [Glossina morsitans morsitans]
          Length = 367

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 67/229 (29%), Positives = 112/229 (48%), Gaps = 15/229 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
           R+GV+ARK+G   ++   G +I  T+L +     + +   ++            N Y  +
Sbjct: 102 RTGVIARKIGQYPLWLKNGEKIRTTLLQVVENHAIKYTPPEEYKPAHRPKVAELNKYGCL 161

Query: 50  QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
            VGA       ++K     F +  V+PK+ L  F +     + P G+  + ++F VG  V
Sbjct: 162 LVGAESCDPSILTKEYCNLFKNSGVTPKRHLVRFLISPSAAITP-GTPLNANHFRVGDYV 220

Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
           DV G T+  GF G +KRH F G+ A+HGV+ +HR  G+ G   + GRV+   K+ G MG 
Sbjct: 221 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKLPGHMGN 280

Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217
                K L +  +++K  ++ V+G  +PG+  N  + + DS       K
Sbjct: 281 RWRKAKGLRIWRINNKYNVLWVQGSAIPGS-TNGLVYIYDSILPLRRHK 328


>gi|286142692|gb|ADC41376.1| ribosomal protein L3 [Streptomyces acrimycini]
          Length = 167

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 76/168 (45%), Positives = 98/168 (58%), Gaps = 1/168 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+      V   RT D +GY +VQ+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVEIR-TADASEYTLGQEVTAEVFEAGVKVDVTGKSKGKGFAGVMKRHNFKGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V 
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167


>gi|194894275|ref|XP_001978039.1| GG17909 [Drosophila erecta]
 gi|190649688|gb|EDV46966.1| GG17909 [Drosophila erecta]
          Length = 362

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 70/229 (30%), Positives = 110/229 (48%), Gaps = 15/229 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
           R GV+ARK+G   ++   G RI  T+L + +  V+ +   ++            +    +
Sbjct: 99  RCGVIARKIGQYPLWLKNGERIRTTLLQIADNHVIKYIPPEEYLPAQVPKIANLHKRGCI 158

Query: 50  QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
            VG+       ++K   G F +  V PKK L  F V  +   L  G+  S ++F +G  V
Sbjct: 159 LVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPE-AQLEAGTPLSVNHFRIGDFV 217

Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
           DV G T+  GF G +KRH F G+ A+HGV+ +HR  G+ G   + GRV+   KM G MG 
Sbjct: 218 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 277

Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217
               +K L V  ++ K  ++ V+G  VPG      + + D+       K
Sbjct: 278 RWRIIKGLRVWRINSKYNVMWVQGSSVPGP-TGGLVYIYDTILPLRKNK 325


>gi|42409125|dbj|BAD10375.1| putative 50S ribosomal protein L3 [Oryza sativa Japonica Group]
 gi|42409256|dbj|BAD10519.1| putative 50S ribosomal protein L3 [Oryza sativa Japonica Group]
          Length = 215

 Score =  199 bits (508), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 77/208 (37%), Positives = 114/208 (54%), Gaps = 5/208 (2%)

Query: 6   VARKLGMTCVYNI-EGRRIPVTVLHL--DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           +A K+GM   ++   G+ +PVTV+        V   +T   +GY AVQVG    + + ++
Sbjct: 1   MATKVGMMTYFDPATGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVREEKLT 60

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           +P  G        P + L EFR+Q  D   P   +     F  G LVD++G +IGKGF G
Sbjct: 61  RPELGHLGKAGAPPLRHLQEFRLQSVDGYDPGQPLDFADMFKEGDLVDISGKSIGKGFQG 120

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            +KRHNF     THG S SHR+ GS G    PGRV+K KKM GRMGG +  ++ L++V +
Sbjct: 121 GIKRHNFKRGLMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKI 179

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSF 210
           D+   ++++KG VPG   N  + +  + 
Sbjct: 180 DNDLKVVMIKGAVPGKPGN-LLRIAPAK 206


>gi|195175673|ref|XP_002028553.1| GL21035 [Drosophila persimilis]
 gi|194104883|gb|EDW26926.1| GL21035 [Drosophila persimilis]
          Length = 368

 Score =  199 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 71/230 (30%), Positives = 111/230 (48%), Gaps = 16/230 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-------------NGYMA 48
           R GV+ARK+G   ++   G+++  T+L + +  V+ +   ++             N Y  
Sbjct: 104 RCGVIARKIGQYPLWLKNGKKVRTTLLQIADNHVIKYMPHEECRPQKNLSRVHNSNQYGC 163

Query: 49  VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQL 108
           + VGA       ++K   G F    V PKK +  F V  D  L P G+  + S F VG+ 
Sbjct: 164 LLVGAESTNPSMLTKEYCGIFRDAGVVPKKNIMRFMVSPDGALAP-GTPLNISRFRVGEY 222

Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
           VDV G T+  GF G +KRH + G+ A+HGV+ +HR  G+ G   + GRV+   KM G MG
Sbjct: 223 VDVRGKTVDHGFQGVVKRHGYKGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKMPGHMG 282

Query: 169 GNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217
                +K L +   + K  ++ V+G  VPG      + + D+       K
Sbjct: 283 NRWRVLKGLRIWRTNAKYNVMWVQGSSVPGP-TGGLVYIYDTILPLRKLK 331


>gi|286142618|gb|ADC41339.1| ribosomal protein L3 [Streptomyces tuirus]
          Length = 167

 Score =  199 bits (507), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 75/168 (44%), Positives = 98/168 (58%), Gaps = 1/168 (0%)

Query: 13  TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
           T V++   R +PVTV+      V   RT D +GY ++Q+  GE   + V+KP++G F+  
Sbjct: 1   TQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESIQIAFGEIDPRKVNKPLKGHFAKA 60

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
           +V+P++ L E R   D     +G   +   F  G  VDVTG + GKGF+G MKRHNF GL
Sbjct: 61  DVTPRRHLVEIR-TADASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            A HG    HRS GS G    PGRVFK  +MAGRMG  RVT +NL V 
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167


>gi|21553426|gb|AAM62519.1| 50S ribosomal protein L3 [Arabidopsis thaliana]
          Length = 271

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 83/214 (38%), Positives = 117/214 (54%), Gaps = 3/214 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
            GV+  KLGM   +  +G  +PVTV+   +   V   +TL  +GY AVQ+G    + K +
Sbjct: 56  IGVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYDAVQIGYRRVRDKKL 115

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G        P + L EFR+   +   P   +     F  G LVDV G TIGKGF 
Sbjct: 116 TKPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGDLVDVAGTTIGKGFQ 175

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRH+F   + THG S SHR+ GS G    PGRV+K KKM GRMGG R  ++ L++V 
Sbjct: 176 GGIKRHHFKRGQMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTRTKIRKLKIVK 234

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           VD +  ++++KG +PG   N  + +  +    VN
Sbjct: 235 VDKELNVVMIKGALPGKPGN-LLRITPAKIVGVN 267


>gi|15224205|ref|NP_181831.1| ribosomal protein L3 family protein [Arabidopsis thaliana]
 gi|42559537|sp|Q9SKX4|RK3A_ARATH RecName: Full=50S ribosomal protein L3-1, chloroplastic; Flags:
           Precursor
 gi|4531443|gb|AAD22128.1| 50S ribosomal protein L3 [Arabidopsis thaliana]
 gi|110740515|dbj|BAE98363.1| 50S ribosomal protein L3 [Arabidopsis thaliana]
 gi|208879532|gb|ACI31311.1| At2g43030 [Arabidopsis thaliana]
 gi|330255107|gb|AEC10201.1| 50S ribosomal protein L3-1 [Arabidopsis thaliana]
          Length = 271

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 83/214 (38%), Positives = 117/214 (54%), Gaps = 3/214 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
            GV+  KLGM   +  +G  +PVTV+   +   V   +TL  +GY AVQ+G    + K +
Sbjct: 56  IGVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYDAVQIGYRRVRDKKL 115

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G        P + L EFR+   +   P   +     F  G LVDV G TIGKGF 
Sbjct: 116 TKPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGDLVDVAGTTIGKGFQ 175

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRH+F   + THG S SHR+ GS G    PGRV+K KKM GRMGG R  ++ L++V 
Sbjct: 176 GGIKRHHFKRGQMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTRTKIRKLKIVK 234

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           VD +  ++++KG +PG   N  + +  +    VN
Sbjct: 235 VDKELNVVMIKGALPGKPGN-LLRITPAKIVGVN 267


>gi|297824271|ref|XP_002880018.1| 50S ribosomal protein L3 [Arabidopsis lyrata subsp. lyrata]
 gi|297325857|gb|EFH56277.1| 50S ribosomal protein L3 [Arabidopsis lyrata subsp. lyrata]
          Length = 271

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 83/214 (38%), Positives = 117/214 (54%), Gaps = 3/214 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
            GV+  KLGM   +  +G  +PVTV+   +   V   +TL  +GY AVQ+G    + K +
Sbjct: 56  IGVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYDAVQIGYRRVRDKKL 115

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G        P + L EFR+   +   P   +     F  G LVDV G TIGKGF 
Sbjct: 116 TKPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGDLVDVAGTTIGKGFQ 175

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRH+F   + THG S SHR+ GS G    PGRV+K KKM GRMGG R  ++ L++V 
Sbjct: 176 GGIKRHHFKRGQMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTRTKIRKLKIVK 234

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           VD +  ++++KG +PG   N  + +  +    VN
Sbjct: 235 VDKELNVVMIKGALPGKPGN-LLRITPAKIVGVN 267


>gi|145628334|ref|ZP_01784135.1| 50S ribosomal protein L3 [Haemophilus influenzae 22.1-21]
 gi|145640870|ref|ZP_01796452.1| 50S ribosomal protein L3 [Haemophilus influenzae R3021]
 gi|144980109|gb|EDJ89768.1| 50S ribosomal protein L3 [Haemophilus influenzae 22.1-21]
 gi|145274384|gb|EDK14248.1| 50S ribosomal protein L3 [Haemophilus influenzae 22.4-21]
          Length = 163

 Score =  198 bits (504), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 70/161 (43%), Positives = 94/161 (58%), Gaps = 2/161 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            G+V RK+GMT ++N +G  +PVTV+ ++  +V   +TL+ +GY AVQV  G  K   V+
Sbjct: 2   IGLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKANRVT 61

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP  G F    V   + L+EFR +   +   +G   +   F   + VDVTG + GKGF G
Sbjct: 62  KPEAGHFVKAGVEAGRGLWEFRTEG--EEFTLGQEINVDIFADVKKVDVTGTSKGKGFQG 119

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
            +KR NF    ATHG S+SHR  GS G  Q PGRVFK KK 
Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKW 160


>gi|195566964|ref|XP_002107045.1| GD17236 [Drosophila simulans]
 gi|194204442|gb|EDX18018.1| GD17236 [Drosophila simulans]
          Length = 362

 Score =  198 bits (503), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 69/229 (30%), Positives = 110/229 (48%), Gaps = 15/229 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
           R GV+ARK+G   ++   G RI  T+L + +  V+ +   ++            +    +
Sbjct: 99  RCGVIARKIGQYPLWLKNGERIRTTLLQIADNHVIKYIPPEEYLPAQVPKVANLHKRGCI 158

Query: 50  QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
            VG+       ++K   G F +  V PKK L  F V  +  L P G+  + ++F +G  V
Sbjct: 159 LVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEAQLAP-GTPLTVNHFRIGDFV 217

Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
           DV G T+  GF G +KRH F G+ A+HGV+ +HR  G+ G   + GRV+   KM G MG 
Sbjct: 218 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 277

Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217
               +K L V  ++ K  ++ V+G  V G      + + D+       K
Sbjct: 278 RWRIIKGLRVWRINTKYNVMWVQGSSVAGP-TGGLVYIYDTILPFRKNK 325


>gi|114589227|ref|XP_001147526.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
          Length = 315

 Score =  198 bits (503), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 72/219 (32%), Positives = 102/219 (46%), Gaps = 34/219 (15%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
            R G++A KLGM  ++  +G++  VT+L                   A  +         
Sbjct: 95  FRVGLIALKLGMMPLWTKDGQKHVVTLLQ-----------------KATSI--------- 128

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
                  F+  + + PK+ +  F +  +  + P G+    ++F  GQ VDVT  TIGKGF
Sbjct: 129 -----LEFYRELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGKGF 182

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
            G MKR  F G  ATHG + +HR  G+     D GRV+   KM G+MG    T   L+V 
Sbjct: 183 QGVMKRWGFKGQPATHGQTKTHRRPGAV-ATGDIGRVWPGTKMPGKMGNIYRTEYGLKVW 241

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            ++ K  +I V G VPG  KN  + VRDS   A    GK
Sbjct: 242 RINTKHNIIYVNGSVPG-HKNCLVKVRDSKLPAYKDLGK 279


>gi|91082959|ref|XP_973661.1| PREDICTED: similar to Mitochondrial 39S ribosomal protein L3
           [Tribolium castaneum]
 gi|270007629|gb|EFA04077.1| hypothetical protein TcasGA2_TC014311 [Tribolium castaneum]
          Length = 355

 Score =  198 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 75/222 (33%), Positives = 117/222 (52%), Gaps = 15/222 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
           R+GV+ARK+G+  ++   G++I  T+L + + QV+ + T +             N    +
Sbjct: 93  RTGVIARKIGIYPMWLKNGKKISTTLLQVLDNQVIKYYTPESYNPPRPRAGRVSNRKGCL 152

Query: 50  QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
            +GA +      ++   G F    V PKK L  F V  D   LP G+  S  +F VG  V
Sbjct: 153 LLGAEQGDPSEFTREYCGIFKDSGVIPKKTLARFFVSPDAA-LPPGTSISALHFCVGNYV 211

Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
           DV G+TI +GF G MKRH F G+ A+HGV+ +HR  G+ G   + GRV+   KM G MG 
Sbjct: 212 DVRGLTIDRGFQGVMKRHGFKGMPASHGVTKTHRRGGNIGGGGEKGRVWPGTKMPGHMGN 271

Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSF 210
               ++ L++  ++ K  ++ V G  +PGA  NS + + D+ 
Sbjct: 272 RYRILRALKIWRINTKYNVLYVSGQNIPGA-TNSIVYIYDTK 312


>gi|195355411|ref|XP_002044185.1| GM22578 [Drosophila sechellia]
 gi|194129474|gb|EDW51517.1| GM22578 [Drosophila sechellia]
          Length = 362

 Score =  197 bits (502), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 69/229 (30%), Positives = 110/229 (48%), Gaps = 15/229 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
           R GV+ARK+G   ++   G RI  T+L + +  V+ +   ++            +    +
Sbjct: 99  RCGVIARKIGQYPLWLKNGERIRTTLLQIADNHVIKYIPPEEYLPAQVPKVANLHKRGCI 158

Query: 50  QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
            VG+       ++K   G F +  V PKK L  F V  +  L P G+  + ++F +G  V
Sbjct: 159 LVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEAQLAP-GTPLNVNHFRIGDFV 217

Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
           DV G T+  GF G +KRH F G+ A+HGV+ +HR  G+ G   + GRV+   KM G MG 
Sbjct: 218 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 277

Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217
               +K L V  ++ K  ++ V+G  V G      + + D+       K
Sbjct: 278 RWRIIKGLRVWRINTKYNVMWVQGSSVAGP-TGGLVYIYDTILPFRKNK 325


>gi|167974870|ref|ZP_02557147.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|188997728|gb|EDU66825.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
          Length = 214

 Score =  197 bits (502), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 72/194 (37%), Positives = 105/194 (54%), Gaps = 8/194 (4%)

Query: 21  RRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKL 80
           + +  TV++++  +V+  +T +K+GY A+Q+G    K K ++KP+ G F   N  PK+ +
Sbjct: 1   KAVAATVIYVEPNKVLAVKTNEKDGYNAIQIGYETVKEKALNKPLLGQFKKANSDPKRHI 60

Query: 81  FEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSI 140
            EFR    D +  VG+  + S F  GQLV+    T G GF+G++KRHNF      HG   
Sbjct: 61  KEFR----DVVAEVGAELTVSEFEPGQLVNAQAYTKGHGFTGSIKRHNFSMGPMGHGAGY 116

Query: 141 SHRSHGSTG---CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197
            HR  GS           RVFK  K+ G  G   VT KNL V+ V     LIL+KG +PG
Sbjct: 117 PHRYVGSIAKGRGGSQAQRVFKGTKLPGHYGHELVTTKNLLVLDVKANENLILIKGAIPG 176

Query: 198 AKKNSWILVRDSFK 211
             K S +L++ + K
Sbjct: 177 P-KGSIVLLKSAKK 189


>gi|88607449|ref|YP_504892.1| 50S ribosomal protein L3 [Anaplasma phagocytophilum HZ]
 gi|88598512|gb|ABD43982.1| ribosomal protein L3 [Anaplasma phagocytophilum HZ]
          Length = 220

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 104/210 (49%), Positives = 140/210 (66%), Gaps = 6/210 (2%)

Query: 8   RKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
           +K+G T +++   G R+PVT+L L++  VV  +    +GY AV +G    +   V+KP  
Sbjct: 4   KKVGSTAMFDATTGSRVPVTLLLLEDTFVVGTKVSGIHGYDAVVLGT--KRRGVVNKPQV 61

Query: 67  GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKR 126
                + +    KLFE RV+   DL P GS    S+F  GQ VDVTG TIG+GF+G MKR
Sbjct: 62  QALRKLGIEEDYKLFESRVKAVGDLQP-GSKVEVSHFFKGQFVDVTGYTIGRGFAGVMKR 120

Query: 127 HNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKR 186
           HNF GLRA+HGVSISHRS GSTG  QDPGRVFK KKMAG MG ++VT++NL+V+ VD+K 
Sbjct: 121 HNFRGLRASHGVSISHRSQGSTGQCQDPGRVFKGKKMAGHMGDSKVTMQNLQVMLVDEKE 180

Query: 187 GLILVKG-CVPGAKKNSWILVRDSFKSAVN 215
            L++V+G  +PGA+  S++ VRD+ K  V 
Sbjct: 181 SLLVVRGTGIPGAE-GSYVFVRDAIKKPVP 209


>gi|24642280|ref|NP_511166.2| mitochondrial ribosomal protein L3 [Drosophila melanogaster]
 gi|22832292|gb|AAF48508.2| mitochondrial ribosomal protein L3 [Drosophila melanogaster]
          Length = 362

 Score =  196 bits (500), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 70/229 (30%), Positives = 110/229 (48%), Gaps = 15/229 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
           R GV+ARK+G   ++   G RI  T+L + +  V+ +   ++            +    +
Sbjct: 99  RCGVIARKIGQYPLWLKNGERIRTTLLQIVDNHVIKYIPPEEYLPAQVPTVANLHKRGCI 158

Query: 50  QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
            VG+       ++K   G F +  V PKK L  F V  +  L P G+  + ++F VG  V
Sbjct: 159 LVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEAQLAP-GTPLNVNHFRVGDFV 217

Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
           DV G T+  GF G +KRH F G+ A+HGV+ +HR  G+ G   + GRV+   KM G MG 
Sbjct: 218 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 277

Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217
               +K L V  ++ K  ++ V+G  V G      + + D+       K
Sbjct: 278 RWRIIKGLRVWRINTKYNVMWVQGSSVAGP-TGGLVYIYDTILPTRKNK 325


>gi|21430844|gb|AAM51100.1| SD19562p [Drosophila melanogaster]
          Length = 362

 Score =  196 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 70/229 (30%), Positives = 110/229 (48%), Gaps = 15/229 (6%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
           R GV+ARK+G   ++   G RI  T+L + +  V+ +   ++            +    +
Sbjct: 99  RCGVIARKIGQYPLWLKNGERIRTTLLQIVDNHVIKYIPPEEYLPAQVPTVANLHKRGCI 158

Query: 50  QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
            VG+       ++K   G F +  V PKK L  F V  +  L P G+  + ++F VG  V
Sbjct: 159 LVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEAQLAP-GTPLNVNHFRVGDFV 217

Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
           DV G T+  GF G +KRH F G+ A+HGV+ +HR  G+ G   + GRV+   KM G MG 
Sbjct: 218 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 277

Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217
               +K L V  ++ K  ++ V+G  V G      + + D+       K
Sbjct: 278 RWRIIKGLRVWRINTKYNVMWVQGSSVAGP-TGGLVYIYDTILPTRKNK 325


>gi|308487608|ref|XP_003105999.1| hypothetical protein CRE_20298 [Caenorhabditis remanei]
 gi|308254573|gb|EFO98525.1| hypothetical protein CRE_20298 [Caenorhabditis remanei]
          Length = 403

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 77/221 (34%), Positives = 100/221 (45%), Gaps = 21/221 (9%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMA------------- 48
           R G+V RK+GM   +  +G RI  TVL +D   VV   + D   Y A             
Sbjct: 102 RVGLVVRKIGMLPQWTNDGNRILCTVLEVDENHVVSVTSPDS-WYKASAVGKRKAFNRHG 160

Query: 49  ----VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
               V VGAG       +   R  F+   V  K+KL  F V +D  L   G      +F 
Sbjct: 161 PMWRVTVGAGNDDPTKYTLAYRRQFARAGVPTKEKLGCFLVTED-ALPHAGQPLDARHFA 219

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
           VGQ V  TG TI  GF G M R    G   T   + SHR  GS G   D  R++  K+M 
Sbjct: 220 VGQHVTATGKTIDWGFQGGMHRWGMRGQP-TRRTTKSHRRIGSVGSVGD-ARIWPGKRMP 277

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWIL 205
           G MG    TV  LE+V +++ + +I VKG VPG    + +L
Sbjct: 278 GHMGYEWRTVSGLEIVRINNDKQVIYVKGSVPGDIGETLLL 318


>gi|168704969|ref|ZP_02737246.1| 50S ribosomal protein L3 [Gemmata obscuriglobus UQM 2246]
          Length = 302

 Score =  194 bits (495), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 86/292 (29%), Positives = 127/292 (43%), Gaps = 73/292 (25%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTL------DKNGYMAVQVGAG 54
           M  G++  K+GMT V+  EG+  PVTVL L  C V+  +         K+GY A+Q+G  
Sbjct: 1   MALGLIGYKVGMTQVFTPEGKAEPVTVLQLGPCPVLQIKYPSAEGGAAKDGYTAIQLGFK 60

Query: 55  EAKVKNVSKPMRGFFS--------------------SVNVSPKKKLFEFRVQ-------- 86
           + K K+ ++P +G  +                      +  P+K + EFR+         
Sbjct: 61  DKKRKSATRPEQGHVAAGLKSKRKDARQKAGVVLPPKADCEPQKVIREFRIDLGGAFVQT 120

Query: 87  -------------------------------KDDDLLPVGSVFSPS-YFTVGQLVDVTGM 114
                                           +D  L VG   +    F   Q VDV G 
Sbjct: 121 GTIKAGPAEASFKVERIKVSGEGATQKHELYTEDVTLKVGDKLTVDQVFKDVQAVDVIGT 180

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC---RQDPGRVFKNKKMAGRMGGNR 171
           T G+G++G MKRHNF G+ A HG    HR  GST      +  GR  K  + AG+ G  R
Sbjct: 181 TKGRGYTGVMKRHNFDGMPAAHGAKKVHRQAGSTASLASNRGTGRPKKGLRRAGQYGNER 240

Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK---SAVNCKGKV 220
           VT++NL VV VD +  L+L++G +PG    + ++VR + K    +   K K 
Sbjct: 241 VTIRNLTVVKVDVENNLMLIRGGIPGFN-GAVVMVRPTNKVGPGSPKAKTKA 291


>gi|42559164|sp|O80360|RK3_TOBAC RecName: Full=50S ribosomal protein L3, chloroplastic; Flags:
           Precursor
 gi|189096128|pdb|3BBO|F Chain F, Homology Model For The Spinach Chloroplast 50s Subunit
           Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
 gi|3298437|dbj|BAA31509.1| chloroplast ribosomal protein L3 [Nicotiana tabacum]
          Length = 259

 Score =  194 bits (494), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 83/209 (39%), Positives = 116/209 (55%), Gaps = 3/209 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
            GV+A KLGM   +   G  +PVTV+   +   V   +T   +GY AVQVG    + + +
Sbjct: 44  VGVMATKLGMMSFFEESGTVVPVTVVGFREGNIVTQIKTEATDGYNAVQVGYRRVRDRKL 103

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G      + P + L EFR+Q  D       +     F  G LVDV+G TIGKGF 
Sbjct: 104 TKPEMGHLEKSGIIPLRHLQEFRLQSIDGFEVTQKLDFGELFKEGDLVDVSGTTIGKGFQ 163

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNF   + THG S SHR  GS G    PGRV+K KKM GRMGG +  ++ L++V 
Sbjct: 164 GGIKRHNFKRGQMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVK 222

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           +DD+  +I++KG +PG   N  + +  + 
Sbjct: 223 IDDQLNIIMIKGALPGKPGN-LLRIAPAK 250


>gi|329942411|ref|ZP_08291221.1| ribosomal L3 family protein [Chlamydophila psittaci Cal10]
 gi|328815321|gb|EGF85309.1| ribosomal L3 family protein [Chlamydophila psittaci Cal10]
          Length = 208

 Score =  194 bits (494), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 70/196 (35%), Positives = 102/196 (52%), Gaps = 8/196 (4%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK------NVSKPM 65
           M  V++ +G  +  +V+ + +  V   +    +GY A+Q+GA E  V        V+KP 
Sbjct: 1   MIHVFDKDGNLVACSVISMSSNVVTQIKVDSTDGYNAIQMGANEINVPEKTLQKRVNKPS 60

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
            G F        + L E R+ ++  + + +GS F    F     VD++G++ GKGF G M
Sbjct: 61  LGHFKKSGSRVFRSLKEVRLSEEAVNEVSLGSEFGLEVFESVSSVDISGVSKGKGFQGVM 120

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR  F G   +HG S  HR  GS G R  PGR F   K    MG   VTVKNLEV+ VD 
Sbjct: 121 KRFGFRGGPQSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGTVNVTVKNLEVIKVDL 179

Query: 185 KRGLILVKGCVPGAKK 200
           ++ ++LVKG +PG + 
Sbjct: 180 EKKVLLVKGAIPGPRG 195


>gi|307103242|gb|EFN51504.1| hypothetical protein CHLNCDRAFT_48352 [Chlorella variabilis]
          Length = 215

 Score =  194 bits (494), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 81/214 (37%), Positives = 104/214 (48%), Gaps = 5/214 (2%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
            GV   K GM   +  +G  +P TV+ L     V   +T +K+GY AVQVG    +   +
Sbjct: 5   VGVWGTKAGMMQFF-KDGASLPATVIALEGGNIVTHVKTAEKDGYTAVQVGYKTCREDKI 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G          K L EF+V+          +     F  G +VDV G TIGKGF 
Sbjct: 64  TKPELGHLQKAGAPAMKHLREFKVKDASGYEAGQQLNLVDMFKAGDMVDVAGTTIGKGFQ 123

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F     THG S S R HGSTG    PGRVF   K AG+MG  R  +K  EV+ 
Sbjct: 124 GGIKRWGFARGNMTHG-SKSKREHGSTGPGSSPGRVFPGLKAAGQMGNVRRKLKA-EVLL 181

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           VD +   I+VKG VPG   N  + +  +    VN
Sbjct: 182 VDAENSAIVVKGSVPGKPGN-VVEIAPAKVVGVN 214


>gi|325973271|ref|YP_004250335.1| 50S ribosomal protein L3 [Mycoplasma suis str. Illinois]
 gi|325989706|ref|YP_004249405.1| 50S ribosomal protein L3 [Mycoplasma suis KI3806]
 gi|323574791|emb|CBZ40451.1| 50S ribosomal protein L3 [Mycoplasma suis]
 gi|323651873|gb|ADX97955.1| 50S ribosomal protein L3 [Mycoplasma suis str. Illinois]
          Length = 230

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 80/219 (36%), Positives = 124/219 (56%), Gaps = 7/219 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVK 59
           M   V+ +K+GM+ +++  G  IPVT+L L   QV+  +T++K GY A+ VG GE  + +
Sbjct: 1   MSREVICQKIGMSSIFSEGGELIPVTLLKLIPLQVLSCKTVEKEGYNALVVGVGEECEER 60

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGK 118
            +SKP+RG F    V+ ++K+ E       +   VG+  S    F +G+ + + G++ G 
Sbjct: 61  KLSKPVRGQFQKKGVALRRKITELSWDGIKE-YSVGNFVSFSDLFQIGEKIKIQGVSRGM 119

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD---PGRVFKNKKMAGRMGGNRVTVK 175
           GF+GA+KR NF     THG    HR  GS    +    P +V+K KKM+GRMGG   T+ 
Sbjct: 120 GFTGAIKRWNFATGPKTHGAGYPHRFQGSLETGRGGMSPQKVWKGKKMSGRMGGENCTIL 179

Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
           NL +V +D +  ++ VKG +PG KK   + VR   K+  
Sbjct: 180 NLRIVHIDSENNIVAVKGSIPGRKKR-LVRVRSLHKAKA 217


>gi|163804107|ref|ZP_02197891.1| 50S ribosomal protein L3 [Vibrio sp. AND4]
 gi|159172077|gb|EDP57032.1| 50S ribosomal protein L3 [Vibrio sp. AND4]
          Length = 148

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 70/150 (46%), Positives = 96/150 (64%), Gaps = 2/150 (1%)

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K   G F+   V   + L+EFR++ D++   VG+  +   F   + VDVTG + GKGF G
Sbjct: 1   KAEAGHFAKAGVEAGRGLWEFRLENDEEF-AVGAELTVELFNETKKVDVTGTSKGKGFQG 59

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           A+KR NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V V
Sbjct: 60  AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 119

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +R L+L+KG VPG+   + ++V+ + K+
Sbjct: 120 DAERNLLLIKGAVPGSTGGN-VIVKPAVKA 148


>gi|242019299|ref|XP_002430099.1| 50S ribosomal protein L3, putative [Pediculus humanus corporis]
 gi|212515180|gb|EEB17361.1| 50S ribosomal protein L3, putative [Pediculus humanus corporis]
          Length = 327

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 18/225 (8%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD--------------KNGYM 47
           RSG++  K+G+   ++  G+ +  T++ + +  V+ +                  K G +
Sbjct: 51  RSGLIGIKIGVLPQWHTNGKPLLTTLIQIVDNHVISYIPPKDFIVNKKRLGRRFYKEGKL 110

Query: 48  -AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVG 106
             + VG+     +  ++   G F+   V PKK L  F +     + P G+    ++F VG
Sbjct: 111 GCLVVGSVNCDPQMFTREYNGLFAKAGVMPKKLLTRFPIHPCAAIQP-GTPLYAAHFKVG 169

Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166
             VD+TG TI +GF G MKR  + G+ A+HGV+ +HR  G+ G   +  RVF   KM G 
Sbjct: 170 DYVDITGKTIYRGFQGVMKRWGYKGMPASHGVTKTHRRPGNIGSGGEKARVFPGTKMPGV 229

Query: 167 MGGNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSF 210
            G    T + L +  +D K  ++ V G  +PG   NS++ V D+ 
Sbjct: 230 QGNKMRTTRGLTIWKIDHKYNVLYVSGDNIPG-DVNSFVYVHDTV 273


>gi|241735550|ref|XP_002413953.1| 60S ribosomal protein L3, putative [Ixodes scapularis]
 gi|215507807|gb|EEC17261.1| 60S ribosomal protein L3, putative [Ixodes scapularis]
          Length = 390

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 70/220 (31%), Positives = 109/220 (49%), Gaps = 15/220 (6%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN----------GYMAVQ 50
           +R+GV+ARK+G+  ++   G+RI  T+L + +  V+ +   ++           G   + 
Sbjct: 107 VRTGVIARKIGIYPMWTTSGKRILTTLLQVLDNHVIRYIPSEEYASSRFGFKAKGRGCLV 166

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           VGAG A       P    F    V PK+KL  F +  D  + P G+  S  +F  G  V+
Sbjct: 167 VGAGSADPMLFKAPYLRLFQESGVMPKRKLTRFLITDDAAIQP-GTPLSAGHFRAGDYVN 225

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           V G T G GF G MKR    G   +HG + +HR  G+ G     G + K K+M G MG  
Sbjct: 226 VYGKTRGHGFQGVMKRWKMKGGPKSHGTTKAHRRLGAIG--GPRGIILKGKRMPGHMGQE 283

Query: 171 RVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDS 209
           R  +  L++  ++ K  ++ V+G  VPGA   S++ + DS
Sbjct: 284 RRLLVGLKIWRINTKLNVLFVQGPAVPGATL-SYVNIYDS 322


>gi|168038916|ref|XP_001771945.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676727|gb|EDQ63206.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 214

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 72/197 (36%), Positives = 105/197 (53%), Gaps = 3/197 (1%)

Query: 15  VYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVN 73
           V+  +G+ +P TV+   +   V   ++   +GY AVQVG    + + ++KP  G  + V 
Sbjct: 11  VFTEDGKAVPCTVVGFHEGNIVTQVKSDATDGYTAVQVGYRRVRDRKLTKPQLGHLNKVG 70

Query: 74  VSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLR 133
             P + L EFRV   +   P   +     F  G L+DV G +IGKGF G +KR+NF   +
Sbjct: 71  AIPMRHLQEFRVVSAEGYEPNQVLQLEEIFKEGDLIDVVGNSIGKGFQGGIKRYNFARGQ 130

Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKG 193
            THG S S R  GS G    PGRV+  KKM G+MG  R  ++ LE+V VD +   +L+KG
Sbjct: 131 MTHG-SKSKRQLGSIGAGTTPGRVYPGKKMPGQMGSGRAKIRKLEIVKVDPELRALLIKG 189

Query: 194 CVPGAKKNSWILVRDSF 210
            VPG   N  + +  + 
Sbjct: 190 SVPGKPGN-LLRITPAK 205


>gi|13507904|ref|NP_109853.1| 50S ribosomal protein L3 [Mycoplasma pneumoniae M129]
 gi|2500227|sp|P75580|RL3_MYCPN RecName: Full=50S ribosomal protein L3
 gi|1674371|gb|AAB96314.1| ribosomal protein L3 [Mycoplasma pneumoniae M129]
          Length = 287

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 75/219 (34%), Positives = 114/219 (52%), Gaps = 8/219 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+   K+GM+ V+     R+P+TV++ +  QV   +T  K+ Y A  +     + K ++K
Sbjct: 5   GIFGVKVGMSQVFTTNNERLPITVIYCEPNQVAGVKTEAKDKYSATLLSFDTVENKKLNK 64

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSG 122
           P +GFF   N+ P K L E R   +     +G   +P + F VG+ VDV+ ++ G+GF+G
Sbjct: 65  PQQGFFEKNNLKPTKHLQEIR---NMTGFEMGQQITPQNLFQVGEYVDVSAISKGRGFTG 121

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCR---QDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           A+KR NF      HG    HR  GS           RVFK KKM+G  G  +VTV+NL +
Sbjct: 122 AIKRWNFKIGPLGHGAGYPHRFQGSVQAGRGGASAQRVFKGKKMSGHYGHEKVTVQNLRI 181

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           V  D+   L+LV G + G +    +L+R + K     K 
Sbjct: 182 VGFDEANMLVLVSGAIAGPE-GGVVLIRTAKKKPGVVKP 219


>gi|221061915|ref|XP_002262527.1| 50S ribosomal protein L3 [Plasmodium knowlesi strain H]
 gi|193811677|emb|CAQ42405.1| 50S ribosomal protein L3, putative [Plasmodium knowlesi strain H]
          Length = 336

 Score =  191 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 73/216 (33%), Positives = 115/216 (53%), Gaps = 4/216 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K+G   ++++ G +  VTV  ++NC V+  + + KNGY A++VG G   V   
Sbjct: 75  RTGLLAYKVGCMSIWDVWGVKHAVTVAKVNNCYVLNQKNITKNGYEALEVGIGNMNVIKQ 134

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SK   G +    +    K+ EF+    D  LPV   FS  +F+ GQ + ++     KGF 
Sbjct: 135 SKNNIGNYIKRKLGFIHKIKEFKCT-HDCFLPVQHKFSVRHFSPGQNLFISSTVKNKGFC 193

Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179
           GAMK+ NF G  A+HG  S +HRS GS    +    VF++KKM   +G    V   N ++
Sbjct: 194 GAMKKWNFSGKNASHGTESKAHRSLGSVSMGKTVNIVFRHKKMNTHIGEKNLVKCSNNKL 253

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             ++  + L+ +KG + G  KN  I + D+   A N
Sbjct: 254 FRINSLQNLLFIKGSI-GGYKNKIIKISDAKGRAFN 288


>gi|68066851|ref|XP_675399.1| 50S ribosomal protein L3 [Plasmodium berghei strain ANKA]
 gi|56494563|emb|CAH99831.1| 50S ribosomal protein L3, putative [Plasmodium berghei]
          Length = 335

 Score =  191 bits (486), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 74/216 (34%), Positives = 114/216 (52%), Gaps = 4/216 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++  K+G   +++I G +  VTV+ +DNC V+  + + KNGY A++VG G   V   
Sbjct: 74  RTGLLGYKVGCMSIWDIWGVKHAVTVVKIDNCYVLNQKNITKNGYEALEVGIGNMNVIKQ 133

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SK   G +    +    K+ EF+   D   LPV   FS  +F+ GQ + ++     KGF 
Sbjct: 134 SKNNIGNYIKRRLGFIHKIREFKCTSD-CFLPVQHKFSARHFSPGQNLFISSSIKNKGFC 192

Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179
           GAMK+ NF G   +HG  S +HRS GS    +    VF+NKKM   +G    V   N ++
Sbjct: 193 GAMKKWNFSGKNKSHGTESKAHRSLGSVSMGKTINIVFRNKKMNTHIGEKSLVKCSNNKL 252

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             ++  + L+ +KG + G  KN  I + D+   A N
Sbjct: 253 FRINSLKNLLFIKGSI-GGYKNKVIKISDAKGRAFN 287


>gi|82593828|ref|XP_725167.1| ribosomal protein L3 [Plasmodium yoelii yoelii str. 17XNL]
 gi|23480072|gb|EAA16732.1| ribosomal protein L3, putative [Plasmodium yoelii yoelii]
          Length = 335

 Score =  191 bits (486), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 74/216 (34%), Positives = 114/216 (52%), Gaps = 4/216 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++  K+G   +++I G +  VTV+ +DNC V+  + + KNGY A++VG G   V   
Sbjct: 74  RTGLLGYKVGCMSLWDIWGVKHAVTVVKIDNCYVLNQKNITKNGYEALEVGIGNMNVIKQ 133

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SK   G +    +    K+ EF+   D   LPV   FS  +F+ GQ + ++     KGF 
Sbjct: 134 SKNNIGNYIKRRLGFIHKIREFKCTSD-CFLPVQHKFSARHFSPGQNLFISSSIKNKGFC 192

Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179
           GAMK+ NF G   +HG  S +HRS GS    +    VF+NKKM   +G    V   N ++
Sbjct: 193 GAMKKWNFSGKNKSHGTESKAHRSLGSVSMGKTINIVFRNKKMNTHIGEKSLVKCSNNKL 252

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             ++  + L+ +KG + G  KN  I + D+   A N
Sbjct: 253 FRINSLKNLLFIKGSI-GGYKNKVIKISDAKGRAFN 287


>gi|316967931|gb|EFV52284.1| electron transfer flavoprotein, alpha subunit [Trichinella
           spiralis]
          Length = 822

 Score =  191 bits (485), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 72/227 (31%), Positives = 108/227 (47%), Gaps = 21/227 (9%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLD----NCQVVVHRTLDK-NGYMAV------ 49
           +R+G+V RK+G+   Y   G R+  T+L       +  V+ +   +K   Y  +      
Sbjct: 174 VRTGLVCRKIGVIPQYFKNGTRVLCTLLEAKEKVLDNHVISYTDPEKWYKYSKIGKKEGL 233

Query: 50  ------QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
                  VG      +  +   RG F    V PK+KL  F +  +  + P G+    ++F
Sbjct: 234 KMLGRLTVGVQSDDPQKFTAAYRGIFEKAGVLPKQKLAAFAITPNAQIQP-GTRLYANHF 292

Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
           TVGQ VDV G TI  GF G M R  F G+ ATHGV+ +HR  GS G       V   KKM
Sbjct: 293 TVGQYVDVWGHTIDYGFQGVMVRWGFKGMPATHGVTKTHRRPGSIGTAG-QACVKPGKKM 351

Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDS 209
            G MG     ++ ++++ ++    ++ VKG  VPG    + I V+DS
Sbjct: 352 PGHMGSEWRALRGIQILRINTAEQVLYVKGPNVPGPV-GTLIYVKDS 397


>gi|255565958|ref|XP_002523967.1| 50S ribosomal protein L3, putative [Ricinus communis]
 gi|223536694|gb|EEF38335.1| 50S ribosomal protein L3, putative [Ricinus communis]
          Length = 285

 Score =  191 bits (485), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 80/209 (38%), Positives = 116/209 (55%), Gaps = 3/209 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
            GV+  KLGM   +  +G  +PVTV+   +   V   +T   +GY +VQVG    + + +
Sbjct: 70  IGVMGTKLGMMSYFESDGTVVPVTVVGFREGNIVTQIKTEATDGYDSVQVGYRRIRDRKL 129

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G      V P + L EFR+Q  D       +     F  G LVDV+G+TIGKGF 
Sbjct: 130 TKPELGHLEKAGVIPMRHLQEFRLQNIDGFEVGQKLVLEEIFKEGDLVDVSGITIGKGFQ 189

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KRHNF   + THG S SHR+ GS G    PGRV+K KKM GRMGG +  ++ L++V 
Sbjct: 190 GGIKRHNFKRGQMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVK 248

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
           +D+    +++KG +PG   N  + +  + 
Sbjct: 249 IDNDLRAVMIKGALPGKPGN-LLRIAPAK 276


>gi|314984887|gb|EFT28979.1| 50S ribosomal protein L3 [Propionibacterium acnes HL005PA1]
          Length = 173

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 83/170 (48%), Positives = 105/170 (61%), Gaps = 2/170 (1%)

Query: 46  YMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105
           Y AVQ+G G  +  NV+KP  G F    V+P++ L E R   D     +G   +   F+ 
Sbjct: 1   YSAVQLGYGAVQAHNVTKPEAGPFEKAGVTPRRHLVELR-TADASEYTLGQEIAADVFSE 59

Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
              VDVTG + GKG +G MKRH FGGLRATHGV   HRS GS G    PG+V K  +MAG
Sbjct: 60  SDFVDVTGTSKGKGTAGVMKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAG 119

Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           RMG  RVTV+NL+V SVD +RG++LV+G VPG  K S ++VR + K A  
Sbjct: 120 RMGVERVTVQNLQVHSVDAERGIMLVRGAVPGP-KGSLLVVRSAAKKAAK 168


>gi|332178455|gb|AEE14144.1| 50S ribosomal protein L3 [Thermodesulfobium narugense DSM 14796]
          Length = 208

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 77/207 (37%), Positives = 115/207 (55%), Gaps = 7/207 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G+V +K+GMT      G  IPVTV+      V   RT++K+GY A++V   E   + 
Sbjct: 4   MFMGLVGKKIGMTSYITPSG-VIPVTVVQAIKGTVADKRTIEKDGYEAIRVAFQECSERK 62

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           ++KP  G F   ++ P KK+ EF+       L VG     S F+VG  ++VTG+T G G 
Sbjct: 63  INKPELGLFKKASIKPHKKIVEFQNSN----LNVGDTLDISMFSVGDSINVTGITRGFGT 118

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G +KR  F     +HG S + R  GSTG      ++ K KKM G MG  + TVKN+ VV
Sbjct: 119 AGTIKRWKFQRGPMSHG-SKNIRKIGSTGVGTGMSKIIKGKKMPGHMGNVKRTVKNISVV 177

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207
            +  +  L+++KG +PG  KNS++++ 
Sbjct: 178 DLMPEDYLVILKGSIPG-HKNSFVILY 203


>gi|301633145|gb|ADK86699.1| 50S ribosomal protein L3 [Mycoplasma pneumoniae FH]
          Length = 287

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 73/219 (33%), Positives = 112/219 (51%), Gaps = 8/219 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+   K+GM+ V+     R+P+TV++ +  QV   +   K+ Y A  +     + K ++K
Sbjct: 5   GIFGVKVGMSQVFTTNNERLPITVIYCEPNQVAGVKNEAKDKYSATLLSFDTVENKKLNK 64

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSG 122
           P +GFF   N+ P K L E R   +     +G   +P + F VG+ VDV+ ++ G+GF+G
Sbjct: 65  PQQGFFEKNNLKPTKHLQEIR---NMTGFEMGQQITPQNLFQVGEYVDVSAISKGRGFTG 121

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCR---QDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           A+KR NF      HG    HR  GS           RVFK KKM+G  G  +VTV+NL +
Sbjct: 122 AIKRWNFKIGPLGHGAGYPHRFQGSVQAGRGGASAQRVFKGKKMSGHYGHEKVTVQNLRI 181

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           V  D+   L+LV G + G +    + +R + K     K 
Sbjct: 182 VGFDEANMLVLVSGAIAGPE-GGVVFIRTAKKKPGVVKP 219


>gi|291230696|ref|XP_002735302.1| PREDICTED: mitochondrial ribosomal protein L3-like [Saccoglossus
           kowalevskii]
          Length = 349

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 72/210 (34%), Positives = 102/210 (48%), Gaps = 9/210 (4%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK--NGYMAVQVGAGEAKVK 59
           R GV+A KLGM  ++  +G R+  T+L L +C V+ +   ++    Y  + VGA  A   
Sbjct: 101 RCGVIAVKLGMMPLWTKQGERLQCTLLQLQDCCVIDYIPPEETQEKYGYLYVGAKNASPL 160

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            V K     F                          +    ++F  G  VDVT  +IG G
Sbjct: 161 YVGKAYADLFKXXXXXXXXXXXXXXXXXKR------TPLYAAHFRPGMYVDVTARSIGHG 214

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G MKR    G  A+HG + +HR  G+TG    PGRV   KKMAG+MG    T  NL+V
Sbjct: 215 FQGVMKRWGMKGQPASHGATKTHRKMGATGGGGKPGRVRLGKKMAGQMGNQLRTEVNLQV 274

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           V V+ +  +I V G VPG    S+++V+D+
Sbjct: 275 VRVNTRYNIIYVSGTVPGFHT-SFVVVKDA 303


>gi|218463388|ref|ZP_03503479.1| 50S ribosomal protein L3 [Rhizobium etli Kim 5]
          Length = 159

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 109/160 (68%), Positives = 128/160 (80%), Gaps = 1/160 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           MRSGV+A+K+GMT VYN  G  +PVTVL +D CQVV  RT++KNGY AVQ+GAG+AKVKN
Sbjct: 1   MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMDGCQVVATRTVEKNGYTAVQLGAGQAKVKN 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            SK MRG F+  NV PK KL EFRV +D +LL +G+     +F  GQLVDVTG TIGKGF
Sbjct: 61  TSKAMRGNFAVANVEPKAKLAEFRVSED-NLLEIGTEIKAGHFAAGQLVDVTGTTIGKGF 119

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VF+ 
Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFQE 159


>gi|262158450|ref|ZP_06029565.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae INDRE 91/1]
 gi|262029611|gb|EEY48260.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae INDRE 91/1]
          Length = 151

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 70/147 (47%), Positives = 94/147 (63%), Gaps = 2/147 (1%)

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G F+   V   + L+EFR++  ++   VGS  +   F   + VDVTG + GKGF GA+K
Sbjct: 7   AGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQGAVK 65

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF     THG S+SHR+ GS G  Q PGRVFK KKMAG MG  RVT +NLE+V VD +
Sbjct: 66  RWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVDAE 125

Query: 186 RGLILVKGCVPGAKKNSWILVRDSFKS 212
           R L+L+KG VPGA   + ++V+ + K+
Sbjct: 126 RNLLLIKGAVPGATGGN-VIVKPAVKA 151


>gi|294950331|ref|XP_002786576.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239900868|gb|EER18372.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 334

 Score =  187 bits (476), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 69/203 (33%), Positives = 99/203 (48%), Gaps = 3/203 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G+ A K+G   +++  G++  VTV  + N  V+  +T+ +NGY A+QVG G   +   
Sbjct: 77  RPGICAFKIGCMGLWDEWGQKHAVTVCKVHNSHVMRQKTIARNGYEALQVGTGWRTLGLH 136

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            +   G      V PK  + EFRV  D  +LPVG  FS  +F  GQ V V+G + GKG+ 
Sbjct: 137 ERRRIGCCIRAGVEPKHHIEEFRVSSD-CMLPVGHEFSVRHFVPGQRVFVSGWSRGKGWQ 195

Query: 122 GAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           G + R  F G        +   R  GS        +V K KK  G MG +   V N  V 
Sbjct: 196 GVVTRWRFAGEGPIRCAATGGMRMPGSISRGMSSSKVDKYKKQPGHMGPDPR-VTNCTVF 254

Query: 181 SVDDKRGLILVKGCVPGAKKNSW 203
            ++  R LI +KG VPG+  +  
Sbjct: 255 RIESTRNLIFLKGAVPGSAGHPI 277


>gi|198423016|ref|XP_002125651.1| PREDICTED: similar to mitochondrial ribosomal protein L3 [Ciona
           intestinalis]
          Length = 392

 Score =  187 bits (476), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 6/210 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH--RTLDKNGYMAVQVGAGEAKVK 59
           R G V  KLG+  ++  +G     T++ + +C V+ +  +        AV +G   A   
Sbjct: 136 RCGAVGIKLGVHPIWFKDGTYANCTLIQIQDCHVIKYFSKEEYNTKTAAVIIGGKNASPF 195

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             ++    F     V  K K F F + ++  L P G+  +  +F  GQ VD T  +IG G
Sbjct: 196 YKNEKYHEFCREAGVPVKAKCFRFLISENAALKP-GTEITAMHFKPGQFVDCTAQSIGYG 254

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G ++R +F G  A        R  GS G  Q  G V K KKMAG++GG     + L+V
Sbjct: 255 FQGVIQRWHFAGGHARKDK-KWMRRPGSIGGSQ-IGWVMKGKKMAGQLGGTNEITRGLKV 312

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           + ++ +  ++ VKG + G   N ++ + DS
Sbjct: 313 LRINTRYNVLYVKGRIAG-HINQFVKIADS 341


>gi|786153|dbj|BAA08831.1| ribosomal protein L3 [Bacillus subtilis]
          Length = 162

 Score =  186 bits (474), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 74/165 (44%), Positives = 102/165 (61%), Gaps = 4/165 (2%)

Query: 48  AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
           A+Q+G  + + K  +KP +G  +    +PK+ + E R  + D    VG       F+ G+
Sbjct: 1   AIQLGFDDKREKLSNKPEKGHVAKAETAPKRFVKELRGVEMDA-YEVGQEVKVEIFSAGE 59

Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
           +VDVTG++ GKGF GA+KRH       +HG S  HR  GS G   DP RVFK K + GRM
Sbjct: 60  IVDVTGVSKGKGFQGAIKRHGQSRGPMSHG-SRYHRRPGSMGPV-DPNRVFKGKLLPGRM 117

Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           GG ++TV+NLE+V VD +R L+L+KG VPGAKK S I V+ + KS
Sbjct: 118 GGEQITVQNLEIVKVDAERNLLLIKGNVPGAKK-SLITVKSAVKS 161


>gi|77414571|ref|ZP_00790714.1| ribosomal protein L3 [Streptococcus agalactiae 515]
 gi|77159369|gb|EAO70537.1| ribosomal protein L3 [Streptococcus agalactiae 515]
          Length = 164

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 79/169 (46%), Positives = 106/169 (62%), Gaps = 6/169 (3%)

Query: 45  GYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
           GY AVQVG  + +    +KP +G  +  N +PK+ + EF   K+ + L VG+  S   F 
Sbjct: 1   GYEAVQVGFDDKREVLSNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFE 57

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G +VDVTG + GKGF G +KRH        HG S  HR  GS G    P RVFKNK++A
Sbjct: 58  AGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLA 115

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           GRMGGNRVTV+NLE+V V  ++ ++L+KG VPGAKK S I ++ + K+A
Sbjct: 116 GRMGGNRVTVQNLEIVQVIPEKNVVLIKGNVPGAKK-SLITIKSAVKAA 163


>gi|221054630|ref|XP_002258454.1| large ribosomal subunit protein l3, prokaryotic (50s)-like
           [Plasmodium knowlesi strain H]
 gi|193808523|emb|CAQ39226.1| large ribosomal subunit protein l3, prokaryotic (50s)-like,
           putative [Plasmodium knowlesi strain H]
          Length = 315

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 7/208 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R  +  +K+ M  +++  G  IP T++ +    +  +R LD  G + +  G    + + +
Sbjct: 92  RIQIRGKKIEMRSIFSPNGELIPATLIEIMPNVI--YRFLD-FGKVGIAYGKPLDESRWI 148

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP  G  + V  + K           +    +G +   SY    + V+V G++ GKGF 
Sbjct: 149 LKPEIGQIAKVGCNYKNTCSLTLTPPQN--FVLGQIIDVSYLYNYKYVNVRGLSKGKGFC 206

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F     THG S  HR  GS G     GRV K KKM G+ G    T+ NL+++ 
Sbjct: 207 GVIKRWGFRRGPMTHGSSH-HRKPGSIGASTHIGRVLKGKKMPGKHGNKYRTMINLKLLG 265

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
           ++ +R  ILV GC+PG  +NS++ V  +
Sbjct: 266 LNLERNEILVSGCIPG-NRNSYVTVTAT 292


>gi|115534155|ref|NP_498045.2| hypothetical protein C26E6.6 [Caenorhabditis elegans]
 gi|94730420|sp|P49404|RM03_CAEEL RecName: Full=Putative 39S ribosomal protein L3, mitochondrial
 gi|83921825|gb|AAA21160.3| Hypothetical protein C26E6.6 [Caenorhabditis elegans]
          Length = 403

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 79/232 (34%), Positives = 104/232 (44%), Gaps = 20/232 (8%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD---------------KNGY 46
           R G+V RK+GM   +  EG RI  TVL +D   VV   + +               ++G 
Sbjct: 102 RVGLVVRKIGMLPQWTNEGNRILCTVLEVDENHVVSITSPEAWYKSSAVGKRKAFNRHGP 161

Query: 47  MA-VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105
           M  V VGAG       +   R  F    +  K+KL  F V +D  L   G      +F V
Sbjct: 162 MWRVTVGAGNDDPTKYTLGYRRQFVRAGIPVKEKLGCFLVTED-ALPSAGQPLDARHFGV 220

Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
           GQ V  TG TI  GF G M R    G   T   + SHR  GS G   D  R++  K+M G
Sbjct: 221 GQYVTATGKTIDWGFQGGMHRWGMRGQP-TRRTTKSHRRIGSVGSVGD-ARIWPGKRMPG 278

Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
            MG    TV  LE+V ++  + +I VKG VPG      IL++D  +     K
Sbjct: 279 HMGYEWRTVSGLEIVRINVDKQVIYVKGSVPG-DIGETILLKDCLQEEKRLK 329


>gi|156095889|ref|XP_001613979.1| 50S ribosomal protein L3 [Plasmodium vivax SaI-1]
 gi|148802853|gb|EDL44252.1| 50S ribosomal protein L3, putative [Plasmodium vivax]
          Length = 336

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 72/216 (33%), Positives = 115/216 (53%), Gaps = 4/216 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K+G   ++++ G +  VTV  +++C V+  + + KNGY A+++G G   V   
Sbjct: 75  RTGLLAYKVGCMSIWDVWGVKHAVTVAKINHCYVLNQKNITKNGYEALEIGIGNMNVVKQ 134

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SK   G +    +    K+ EF+   D   LPV   FS  +F+ GQ + ++     KGF 
Sbjct: 135 SKNNIGNYIKRKLGFIHKIKEFKCTSD-CFLPVQHKFSARHFSPGQNLFISSTIKSKGFC 193

Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179
           GAMK+ NF G  A+HG  S +HRS GS    +    VF+NKKM   +G    V   N ++
Sbjct: 194 GAMKKWNFSGKNASHGTESKAHRSLGSVSMGKTVNIVFRNKKMNTHIGEKTLVKCSNNKL 253

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             ++  + L+ +KG + G  KN  I + D+   A N
Sbjct: 254 FRINSLQNLLFIKGPI-GGYKNKIIKISDAKGRAFN 288


>gi|124806820|ref|XP_001350840.1| mitochondrial ribosomal protein L3 precursor, putative [Plasmodium
           falciparum 3D7]
 gi|23496969|gb|AAN36520.1| mitochondrial ribosomal protein L3 precursor, putative [Plasmodium
           falciparum 3D7]
          Length = 341

 Score =  185 bits (471), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 73/216 (33%), Positives = 115/216 (53%), Gaps = 4/216 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           RSG++  K+G   ++++ G +  VTV+ +DNC V+  +T+ KNGY A+++G G   V   
Sbjct: 80  RSGLLGYKVGCMSIWDVWGVKHAVTVVKIDNCYVINQKTISKNGYEALELGVGNMNVIKQ 139

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SK   G F    +    K+ EF+   D   LP+   FS  +F+ GQ + ++     KGF 
Sbjct: 140 SKNNIGNFIKRKLGFIHKIKEFKCTSD-CFLPIHHKFSCRHFSPGQNLFISSGIKNKGFC 198

Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179
           GAMK+ NF G   +HG  S +HRS GS    +    VF+NKKM   +G    V   N ++
Sbjct: 199 GAMKKWNFSGKNKSHGTESKAHRSLGSVSMGKTINIVFRNKKMNTHIGEKSLVKCSNNKL 258

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             ++  + L+ +KG + G  KN  I + D+   + N
Sbjct: 259 FRINSLKNLLFIKGTI-GGYKNKVIKISDAKGRSFN 293


>gi|12045004|ref|NP_072814.1| 50S ribosomal protein L3 [Mycoplasma genitalium G37]
 gi|1350743|sp|P47397|RL3_MYCGE RecName: Full=50S ribosomal protein L3
 gi|3844745|gb|AAC71369.1| ribosomal protein L3 [Mycoplasma genitalium G37]
 gi|166078974|gb|ABY79592.1| ribosomal protein L3 [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 257

 Score =  183 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 71/218 (32%), Positives = 113/218 (51%), Gaps = 8/218 (3%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G+   K+GM+ ++  +   +P+T+++ +  QV   +T+ K+ Y A  +       K ++K
Sbjct: 5   GIFGVKVGMSQIFTEQNECLPITIVYCEANQVAGIKTIAKDNYNATLLSFQTVDEKQLNK 64

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSG 122
           P +GFFS + + P K L E R         +G   +P   F +G+ VDVT +T G+GF+G
Sbjct: 65  PKQGFFSKLKLEPHKYLREIR---KMQGFELGKKITPQELFKIGEYVDVTSLTKGRGFTG 121

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGC---RQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           A+KR NF      HG    HR  GS           RVFK KKM+G  G  +VT++NL +
Sbjct: 122 AIKRWNFKIGPLGHGAGYPHRFQGSVQAGRGGSSAQRVFKGKKMSGHYGHEQVTIQNLFI 181

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           V  D+   L+LV G + G +    +L++ + K     K
Sbjct: 182 VGFDEINKLVLVSGAIAGPE-GGIVLIKTAKKKTGKIK 218


>gi|323308966|gb|EGA62197.1| Mrpl9p [Saccharomyces cerevisiae FostersO]
          Length = 235

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 77/175 (44%), Positives = 107/175 (61%), Gaps = 2/175 (1%)

Query: 2   RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           R G++ RK GM   ++   G R   T+L ++N +V++HRT + NGY A QVG G   +  
Sbjct: 58  RCGLITRKKGMMPYFDKSTGERSAATILEVNNVEVIMHRTSEVNGYFACQVGYGSRHLSK 117

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVF-SPSYFTVGQLVDVTGMTIGKG 119
           VS+ M G F+S  V+PK+ + EFRV+ +  +     +  +  +F  GQ VDV  ++ GKG
Sbjct: 118 VSRQMLGHFASKVVNPKEHVAEFRVKDEKGINTTWHIIETVFFFKEGQYVDVRSVSKGKG 177

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           F+G MKR+ F GLRA+HG SI HR  GS G  QDPGRV   +KM G MG   VT+
Sbjct: 178 FTGVMKRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTI 232


>gi|268574488|ref|XP_002642221.1| Hypothetical protein CBG18195 [Caenorhabditis briggsae]
 gi|187025223|emb|CAP35690.1| hypothetical protein CBG_18195 [Caenorhabditis briggsae AF16]
          Length = 402

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 74/213 (34%), Positives = 96/213 (45%), Gaps = 21/213 (9%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMA------------- 48
           R G+V RK+GM   +  EG RI  T+L +D   VV   + D   Y A             
Sbjct: 102 RVGLVVRKIGMLPQWTKEGGRILCTILEVDENHVVGITSPDS-WYKASAIGKRKAFNRHG 160

Query: 49  ----VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
               V VGA      N +   R  F+   V  K+ L  F V +D   L +G      +F 
Sbjct: 161 PMWRVTVGATNQDPTNYTSAYRKKFTRAGVPVKETLGCFLVTEDALPL-LGQPLDARHFE 219

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
           VGQ V  TG TI  GF G M R    G   T   + SHR  GS G   D  R++  K+M 
Sbjct: 220 VGQYVTATGKTIDWGFQGGMHRWGMRGQP-TRRTTKSHRRIGSVGSVGD-ARIWPGKRMP 277

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197
           G MG    TV  LE+V ++  + ++ VKG VPG
Sbjct: 278 GHMGYEWKTVSGLEIVRINIDKQVMYVKGSVPG 310


>gi|156097364|ref|XP_001614715.1| 50S ribosomal protein L3 [Plasmodium vivax SaI-1]
 gi|148803589|gb|EDL44988.1| 50S ribosomal protein L3, putative [Plasmodium vivax]
          Length = 316

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 7/208 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R  +  +K+ M  +++  G+ IP T++ +    +  +R LD  G + +  G    + + +
Sbjct: 93  RIQIRGKKIEMRSIFSPNGKLIPATLIEIMPNVI--YRFLD-FGKVGIAYGKPLEESRWI 149

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP  G  + V  + K           +    +G +   SY    + V+V G++ GKGF 
Sbjct: 150 LKPEIGQIAKVGCNYKNTCSLTLTPPQN--FVLGQIIDVSYLYNYKYVNVRGLSKGKGFC 207

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F     THG S  HR  GS G     GRV K KKM G+ G    T+ NL+++ 
Sbjct: 208 GVIKRWGFRRGPMTHGSSH-HRKPGSIGASTHIGRVLKGKKMPGKHGNKYNTMINLKLLG 266

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
           ++ +R  ILV GC+PG  +NS++ V  +
Sbjct: 267 LNLERNEILVSGCIPG-NRNSYVTVTAT 293


>gi|70924866|ref|XP_735214.1| 50S ribosomal protein L3 [Plasmodium chabaudi chabaudi]
 gi|56508675|emb|CAH83308.1| 50S ribosomal protein L3, putative [Plasmodium chabaudi chabaudi]
          Length = 237

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 73/216 (33%), Positives = 114/216 (52%), Gaps = 4/216 (1%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++  K+G   +++I G +  VTV+ +DNC V+  + + KNGY A++VG G   V   
Sbjct: 11  RTGLLGYKVGCMSIWDIWGVKHAVTVVKIDNCYVLNQKNITKNGYEALEVGIGNMNVIKQ 70

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           SK   G +    +    K+ EF+   D   LPV   FS  +F+ GQ + ++     KGF 
Sbjct: 71  SKNNIGNYIKRRLGFIHKIREFKCTSD-CFLPVQHKFSARHFSPGQNLFISSSIKNKGFC 129

Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179
           GAM++ NF G   +HG  S +HRS GS    +    VF+NKKM   +G    V   N ++
Sbjct: 130 GAMQKWNFSGKNQSHGTESKAHRSLGSVSMGKTINIVFRNKKMNTHIGEKSLVKCSNNKL 189

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             ++  + L+ +KG + G  KN  I + D+   A N
Sbjct: 190 FRINSLKNLLFIKGTI-GGYKNKIIKISDAKGRAFN 224


>gi|296005215|ref|XP_002808939.1| organelle ribosomal protein L3 precursor, putative [Plasmodium
           falciparum 3D7]
 gi|225631825|emb|CAX64220.1| organelle ribosomal protein L3 precursor, putative [Plasmodium
           falciparum 3D7]
          Length = 317

 Score =  182 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 7/214 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           +  +  RK+ M  +++ +G  IP T++ +    +  +R LD  G + +  G    + + +
Sbjct: 94  KIQIRGRKIEMKSIFSPQGDLIPATLIEIMPNVI--YRFLD-FGKVGIAYGKPLDESRWI 150

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP  G  + V  + K           +    +G +   SY    + V+V G++ GKGF 
Sbjct: 151 LKPEIGQIAKVGCNLKNTCSLTLTPPQN--FVLGQIIDVSYLYNYKYVNVRGLSKGKGFC 208

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F     +HG S  HR  GS G     GRV K KKM G+ G    T+ NL+++ 
Sbjct: 209 GVIKRWGFKRGPMSHGSSH-HRKPGSIGASTHIGRVLKGKKMPGKHGNKYRTMINLKLLG 267

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           ++ +R  ILV GC+PG  +NS++ V  +  + VN
Sbjct: 268 LNLERNEILVSGCIPG-NRNSYVTVTATRDNKVN 300


>gi|82753677|ref|XP_727774.1| ribosomal protein L3 [Plasmodium yoelii yoelii str. 17XNL]
 gi|23483784|gb|EAA19339.1| ribosomal protein L3, putative [Plasmodium yoelii yoelii]
          Length = 315

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 66/214 (30%), Positives = 108/214 (50%), Gaps = 7/214 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R  +  +K+ M  +++  G+ IP T++ +     +++R LD  G + +  G    + + +
Sbjct: 92  RIQIRGKKIEMRSIFSPNGKLIPATLIKIMPN--IIYRFLD-FGKVGIAYGKPLNESRWI 148

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP  G  S +N + K           +    +G +   SY    + V+V G++ GKGFS
Sbjct: 149 LKPEIGQISKINSNLKNTCSLTLTPPQN--FVLGQIIDVSYLYNYKYVNVRGLSKGKGFS 206

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F     THG S  HR  GS G     GRV K KKM G+ G    T+ NL+++ 
Sbjct: 207 GVIKRWGFHRGPMTHG-SGHHRKPGSIGASTHIGRVLKGKKMPGKDGNKYRTMINLKLLG 265

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           ++ +R  ILV GC+PG  +NS + V  +  + +N
Sbjct: 266 LNLERNEILVSGCIPG-NRNSDVTVTATRDNKIN 298


>gi|324516671|gb|ADY46600.1| 39S ribosomal protein L3 [Ascaris suum]
          Length = 401

 Score =  181 bits (461), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 74/234 (31%), Positives = 105/234 (44%), Gaps = 22/234 (9%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGY--------------- 46
           R G++ARKLGM   +   G R+  T+L      VV     +   Y               
Sbjct: 96  RVGLLARKLGMLPQWLNNGTRVLCTMLEFPENCVVSAIDPET-WYRKSIVGKKKAFGIQG 154

Query: 47  --MAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
               V VGA  A     +   R  F    +  K+ L  F V +D  + P G+     +F+
Sbjct: 155 PMWKVTVGAVNADPSKFTHVYRDIFMRQGLPVKQHLGSFVVTEDAVVAP-GTPLHVCHFS 213

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
           VGQ + VTG TI  GF G M R    G+ A    + SHR  GS G   D  RV+  K+M 
Sbjct: 214 VGQYIAVTGRTIDWGFQGGMHRWGMKGMPANR-TTKSHRRIGSIGSTGD-ARVWPGKRMP 271

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           G MG   VT   LEV+ ++  + ++ +KGCVPG +    +LV+D  + +   K 
Sbjct: 272 GHMGYEWVTTSGLEVLRINPGKQVMYIKGCVPG-EVGEILLVKDCLQPSKRVKN 324


>gi|326505122|dbj|BAK02948.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 403

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/224 (29%), Positives = 107/224 (47%), Gaps = 18/224 (8%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD---------------KNGY 46
           R G++A KLG    +  +G+++ +T+L + +  V+ +   +               K G 
Sbjct: 115 RIGLIAVKLGSIPQWTNDGKKVYLTMLQVLDNHVIDYVPPEVIMSKSNNSVLKSRTKEGR 174

Query: 47  MAVQ-VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105
           + +  VGA  +  +  +      F +  V PK+KL +F +  +  + P G+    S+F V
Sbjct: 175 LGMAIVGALSSDPRLYTPSYLKLFENSGVPPKRKLTKFMITPNAAVQP-GTPLFASHFRV 233

Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
           G  VDV   TIG GF G MKR  F G   +HG +  HR  G+ G  +D  +  K  KMAG
Sbjct: 234 GDYVDVGAKTIGYGFQGVMKRWGFKGGPRSHGATKFHRKRGTIGSGRD-RKPIKGMKMAG 292

Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
            MG        L+V  +++K  ++ V+G V     + ++ V DS
Sbjct: 293 HMGCKWRIQFGLKVWRINNKYNILYVQGPVIPGPTHCYVRVVDS 336


>gi|240279928|gb|EER43432.1| 50S ribosomal protein L3 [Ajellomyces capsulatus H143]
          Length = 247

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 71/185 (38%), Positives = 112/185 (60%), Gaps = 2/185 (1%)

Query: 30  LDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD 89
           +     ++     KNGY AVQ+G G    + V++PM G F++  V+PK+ + EFRV+ ++
Sbjct: 47  IGPNLPILTSHPSKNGYYAVQIGCGWKHERAVTRPMLGHFAANGVAPKRHIHEFRVKDEN 106

Query: 90  DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHR-SHGST 148
            LLP+G + + ++F  GQ VD    + G GF+G MKRH F G   +HGVS++HR    S 
Sbjct: 107 GLLPIGEMINANWFQEGQYVDARSNSRGMGFAGVMKRHGFHGQDRSHGVSLTHRSMGSSG 166

Query: 149 GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRD 208
             +    RV+  KKMAG MG  +VT++NL+V+ VD ++G+++V G V G  K   + ++D
Sbjct: 167 PGQGGGSRVYPGKKMAGNMGNKQVTLQNLKVLKVDAEKGIVVVNGNVSGP-KGCIVKLQD 225

Query: 209 SFKSA 213
           + K  
Sbjct: 226 ALKKP 230


>gi|238601104|ref|XP_002395321.1| hypothetical protein MPER_04643 [Moniliophthora perniciosa FA553]
 gi|215465855|gb|EEB96251.1| hypothetical protein MPER_04643 [Moniliophthora perniciosa FA553]
          Length = 259

 Score =  178 bits (452), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 85/204 (41%), Positives = 112/204 (54%), Gaps = 24/204 (11%)

Query: 29  HLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKD 88
            +    V   +   +  Y AVQV A +   K  ++ MRG F    V  K+ + EF +  D
Sbjct: 5   QVTANIVTARKNASE--YHAVQVAASDRPFKTTTQQMRGHFRKAQVPCKRVVREFPITPD 62

Query: 89  DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148
              +PVG+  S  +F  GQ VDV   +IGKGF+G MKR  F GLRA+HGVSISHRS G+T
Sbjct: 63  -AHVPVGTTLSAIHFVPGQFVDVIAKSIGKGFAGGMKRWGFKGLRASHGVSISHRSIGAT 121

Query: 149 GCRQ--------------------DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188
           G  Q                    +PGRV+  KKM GR+GG R+T +NL VV VD +  L
Sbjct: 122 GAHQVLYQKDIFVAYLIDKASVSRNPGRVWPGKKMPGRLGGERITTQNLAVVRVDSELNL 181

Query: 189 ILVKGCVPGAKKNSWILVRDSFKS 212
           I VKG VPG   +S ++V+D+ K 
Sbjct: 182 IYVKGAVPGVD-DSHVMVKDAKKK 204


>gi|152940799|gb|ABS44864.1| putative 50S ribosomal protein L3 [Oryza sativa Japonica Group]
          Length = 188

 Score =  178 bits (451), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 68/180 (37%), Positives = 98/180 (54%), Gaps = 2/180 (1%)

Query: 31  DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDD 90
               V   +T   +GY AVQVG    + + +++P  G        P + L EFR+Q  D 
Sbjct: 2   GGNVVTQVKTAATDGYDAVQVGYHGVREEKLTRPELGHLGKAGAPPLRHLQEFRLQSVDG 61

Query: 91  LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
             P   +     F  G LVD++G +IGKGF G +KRHNF     THG S SHR+ GS G 
Sbjct: 62  YDPGQPLDFADMFKEGDLVDISGKSIGKGFQGGIKRHNFKRGLMTHG-SKSHRALGSIGA 120

Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
              PGRV+K KKM GRMGG +  ++ L++V +D+   ++++KG VPG   N  + +  + 
Sbjct: 121 GTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDNDLKVVMIKGAVPGKPGN-LLRIAPAK 179


>gi|325116477|emb|CBZ52031.1| putative 50S ribosomal protein L3 [Neospora caninum Liverpool]
          Length = 447

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 6/202 (2%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ARK+ MT  ++ +G+  PVT+L +    +V      + G   V   A + +   V +P
Sbjct: 199 LLARKIDMTACFSPDGQAEPVTLLQVIPATIVQ---FLEYGKAVVSYDAPKRRRLFVKRP 255

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           + G    V  +   +     V+  ++ + +G V   S     + V V  +   KGF G +
Sbjct: 256 VLGKLQRVGAT-GFETATLTVRPPNEFV-LGQVLDVSSLMGAKHVHVRALKKAKGFQGIV 313

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
            RH F     THG S  HR  GS G   DPGRV    +MAGR      TV+NL V+  + 
Sbjct: 314 SRHGFHRGPMTHG-STHHRGPGSVGAGTDPGRVLPGTRMAGRDKAKYATVRNLRVLGFNP 372

Query: 185 KRGLILVKGCVPGAKKNSWILV 206
           K+ L++V+G VPG    + + V
Sbjct: 373 KQNLLIVRGSVPGWDMRTVVHV 394


>gi|56753667|gb|AAW25036.1| SJCHGC01793 protein [Schistosoma japonicum]
          Length = 391

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 30/237 (12%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTL-DKNGYMAVQ---------- 50
           R G++A KLG+  ++   G ++  TV  + +   + +    + + Y+++           
Sbjct: 94  RCGLIAIKLGVYPLWTKTGEKMDCTVFQVPDNHALRYTPPSEIDKYISLLHPRHYWLNSK 153

Query: 51  ---------------VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG 95
                          VGA  A + N       +     V PK+K+  F V  D  L P G
Sbjct: 154 RPPSWITQKRWGIQLVGAFSADLLNSLLNGVAYLKEAGVPPKRKISRFLVSPDAALKP-G 212

Query: 96  SVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
           +  S  +F VG  +D+T  TI +GF G ++R    G  A HG +  HR  GS      P 
Sbjct: 213 TPLSVHHFRVGDYLDITARTINRGFQGVIERWGMKGGPAAHGSTKFHRRMGSAAGCGGP- 271

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            + + K+M G MG    +++ + +V ++ K GLI V G  PG   +++ L+ DS+ +
Sbjct: 272 -IARGKRMPGVMGNRFRSLRGVMIVRINPKLGLIYVPGATPGPV-HAYCLLHDSWLA 326


>gi|256087284|ref|XP_002579802.1| 50S ribosomal protein L3 [Schistosoma mansoni]
 gi|238665289|emb|CAZ36041.1| 50S ribosomal protein L3, putative [Schistosoma mansoni]
          Length = 394

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/235 (27%), Positives = 110/235 (46%), Gaps = 30/235 (12%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTL-DKNGYMAVQ---------- 50
           R G++A KLG+  ++   G+++  T+  + +   + +    + + Y+++           
Sbjct: 96  RCGLIAIKLGVYPLWTKTGKKMDCTIFQIPDNHAIRYTPPSEIDKYISLLHPRHYWLNNK 155

Query: 51  ---------------VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG 95
                          VGA  A     +    G F    + PK+K+  F V  D  L P G
Sbjct: 156 RPPSWITQKRWGIQLVGAFSADPIEFTSEWCGLFKEAGIPPKRKISRFLVSPDAALKP-G 214

Query: 96  SVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
           +  S ++F VG  +D+T  TI +GF G ++R    G  A HG +  HR  GS   R  P 
Sbjct: 215 TPLSVNHFRVGDYLDITARTINRGFEGVIERWGMKGGPAAHGSTKFHRRMGSAAGRGGP- 273

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
            + + K+MAG MG    +++ + +V ++ K GLI V G  PG   +S+ L+ DS+
Sbjct: 274 -IVRGKRMAGVMGNRFRSLRGVMIVRINPKLGLIYVPGTTPGPV-HSYCLLNDSW 326


>gi|170596208|ref|XP_001902682.1| Mitochondrial 39S ribosomal protein L3 [Brugia malayi]
 gi|158589507|gb|EDP28470.1| Mitochondrial 39S ribosomal protein L3, putative [Brugia malayi]
          Length = 424

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 68/237 (28%), Positives = 105/237 (44%), Gaps = 34/237 (14%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-------------GYMA 48
           R G++ARK+GM   + ++G R   T+L      V+     +                Y A
Sbjct: 111 RIGMLARKIGMFPQWAVDGTRFLCTLLEFPKNLVISAIDPETYYRISMVGRRKAYGRYGA 170

Query: 49  ---VQVGAGEAKVKNVSKPMRGFFSSVNVS--------------PKKKLFEFRVQKDDDL 91
              V VGA +      +   R  F    V+               KK +  F V +D  +
Sbjct: 171 RWRVTVGAVDGDPTKFTARYRATFERHGVNFVAVFIFLILSGFPVKKHIASFLVTEDAVV 230

Query: 92  LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151
            P G+     +F VGQ + +TG TI  GF G M R  F G+ A  G + SHR  G+ G +
Sbjct: 231 QP-GTELHVCHFKVGQYITITGHTIDWGFQGGMHRWGFKGMPA-RGTTKSHRRIGAIGSK 288

Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRD 208
            D  RV   K+M G MG    ++  LEV+ ++ ++ ++ V G VPG +    +L++D
Sbjct: 289 GD-ARVRPGKRMPGHMGYEWRSIPGLEVLRINPEKQVMYVNGSVPG-ETGEILLIKD 343


>gi|290462065|gb|ADD24080.1| 39S ribosomal protein L3, mitochondrial [Lepeophtheirus salmonis]
          Length = 351

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 71/242 (29%), Positives = 116/242 (47%), Gaps = 29/242 (11%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMA------------ 48
           +RSG++A+K+G+  ++   G RI  T+L + +  VV +   ++  Y +            
Sbjct: 77  IRSGIIAQKIGLAPLWTKSGVRIMSTLLQVKDNHVVRYIPAEE--YASTHVGEKIKAPKG 134

Query: 49  -----------VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV 97
                      + VGA        +K   G F+   VSPK+ L  F V  +  L P G+ 
Sbjct: 135 ITDTPRGLNPVLVVGADSRDPSTFTKGYCGLFNGSGVSPKRILSRFIVSPNAILKP-GTP 193

Query: 98  FSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRAT-HGVSISHRSHGSTGCRQDPGR 156
              S+F VG  VDV G  I +GF G MKR  F G+ +   G + +HR  GS G      R
Sbjct: 194 LYASHFQVGAYVDVRGTGIRRGFQGVMKRWGFHGMPSDNRGATKTHRRPGSIGSGCQKSR 253

Query: 157 VFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGC-VPGAKKNSWILVRDSFKSAVN 215
           V+  +K+ G MGGN++ +  L+++ ++ K G++ V G  +PG     ++ V D+     +
Sbjct: 254 VWPGQKLPGLMGGNKMIMPALQILRINHKEGVLYVTGQGIPG-NTGDFVQVFDTRHPVKS 312

Query: 216 CK 217
            K
Sbjct: 313 LK 314


>gi|330902741|gb|EGH33754.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 143

 Score =  175 bits (445), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 73/144 (50%), Positives = 92/144 (63%), Gaps = 3/144 (2%)

Query: 69  FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
           F+  NV+  + + EFR+++ D     G       F  GQLVDVTG + GKGF G +KR N
Sbjct: 1   FAKANVAAGRTVMEFRLEEGD--YQAGDQIKAEIFAAGQLVDVTGQSKGKGFQGTIKRWN 58

Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188
           F G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV VD +R L
Sbjct: 59  FRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVVRVDAERNL 118

Query: 189 ILVKGCVPGAKKNSWILVRDSFKS 212
           +LVKG VPGA   + + VR + K+
Sbjct: 119 LLVKGAVPGATGGNLV-VRPAAKA 141


>gi|217073974|gb|ACJ85347.1| unknown [Medicago truncatula]
          Length = 224

 Score =  174 bits (442), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 68/167 (40%), Positives = 87/167 (52%), Gaps = 2/167 (1%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
            GV+  KLGM   +   G  +PVTV+   +   V   +    +GY AVQVG    + + +
Sbjct: 57  VGVMGTKLGMMSFFQPNGEVVPVTVVGFKEGNIVTQIKADATDGYNAVQVGYRRVRDRKL 116

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G        P + L EFR+Q  D   P   +     F  G LVDV+G TIGKGF 
Sbjct: 117 TKPEMGHLEKAGAIPMRHLQEFRLQSVDGFEPNQRLVFDELFNEGDLVDVSGTTIGKGFQ 176

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
           G +KRHNF     +HG S SHR  GS G    PGRV+K KKM G+ G
Sbjct: 177 GGIKRHNFKRGPMSHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGKDG 222


>gi|148927108|ref|ZP_01810738.1| ribosomal protein L3 [candidate division TM7 genomosp. GTL1]
 gi|147887427|gb|EDK72871.1| ribosomal protein L3 [candidate division TM7 genomosp. GTL1]
          Length = 180

 Score =  174 bits (441), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 75/180 (41%), Positives = 100/180 (55%), Gaps = 5/180 (2%)

Query: 26  TVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV 85
           T++    C V   +T DK+GY AVQ+G GE K  N+S  + G   +  V+PK        
Sbjct: 2   TLVQAGPCAVTQVKTADKDGYNAVQIGYGEGK--NLSNAVAGHVKAAKVTPKVIREIRV- 58

Query: 86  QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145
             + D + VG       F VG  VDVTG + GKGF+G +KRHNF   + THG +   R  
Sbjct: 59  -NELDEIKVGDQLGVDLFIVGDNVDVTGTSKGKGFAGTVKRHNFNTSKKTHGGNGYVRKV 117

Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWIL 205
           GS G    P ++FK K+MAGRMG   VTVKNL V  +D +  LI +KG VPG +K   ++
Sbjct: 118 GSIGSM-YPQKIFKGKRMAGRMGHETVTVKNLSVAYIDAESNLIGLKGAVPGPRKGIVVI 176


>gi|330903578|gb|EGH34150.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 139

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 71/137 (51%), Positives = 88/137 (64%), Gaps = 2/137 (1%)

Query: 69  FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
           F+  NV+  + + EFR+++ D     G       F  GQLVDVTG + GKGF G +KR N
Sbjct: 1   FAKANVAAGRTVMEFRLEEGD--YQAGDQIKAEIFAAGQLVDVTGQSKGKGFQGTIKRWN 58

Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188
           F G   THG S+SHR  GS G  Q PGRVFK KKM+G MG  RVTV++LEVV VD +R L
Sbjct: 59  FRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVVRVDAERNL 118

Query: 189 ILVKGCVPGAKKNSWIL 205
           +LVKG VPGA   + +L
Sbjct: 119 LLVKGAVPGATGGNLVL 135


>gi|194767737|ref|XP_001965971.1| GF11271 [Drosophila ananassae]
 gi|190619814|gb|EDV35338.1| GF11271 [Drosophila ananassae]
          Length = 354

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 74/233 (31%), Positives = 115/233 (49%), Gaps = 17/233 (7%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
           R G +ARK+G   ++   G +I  T+L + +  ++ +   +K            N +  +
Sbjct: 91  RCGTIARKIGEYPLWLNNGEKIRTTLLQIIDNHIISYIPPEKYSPAHYPNVKNVNKFGCL 150

Query: 50  QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
            VGAG      ++K   G F    V PKK L  F V  +  L P G+  + +++ VG+ V
Sbjct: 151 LVGAGTINPTWLTKEYCGIFHESRVMPKKMLARFLVSPEAALHP-GTALNVAHYRVGEFV 209

Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
           DV G TI  GF G +KR  F G+ A+HGV+ +HR  G+ G   + GRV+   KM GRMG 
Sbjct: 210 DVRGKTIDYGFQGVVKRFGFKGMPASHGVTKTHRRVGNIGGGGEKGRVWPGTKMPGRMGS 269

Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCKGKVS 221
                K L+V+    K  ++ V+G  VPG      + + D+     + K K+S
Sbjct: 270 RWRINKGLQVLRTYLKYNVMWVQGSAVPGP-TGGIVYLYDTILP--HRKKKIS 319


>gi|11465422|ref|NP_045187.1| ribosomal protein L3 [Cyanidium caldarium]
 gi|42559313|sp|Q9TLT2|RK3_CYACA RecName: Full=50S ribosomal protein L3, chloroplastic
 gi|6466325|gb|AAF12907.1|AF022186_29 unknown [Cyanidium caldarium]
          Length = 215

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 73/200 (36%), Positives = 101/200 (50%), Gaps = 5/200 (2%)

Query: 7   ARKLGMTCVYNIEGRRIPVTVL-HLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
             KLGMT + +  G  +PVT++     C +    T   N    + +  G       +KP 
Sbjct: 10  GVKLGMTQILDNFGNLVPVTIVSQPKPCVITRVTTS-LNSQQKLIIQIGCYSDFRANKPT 68

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G+F   +V   + L EF+  K+++   VG           QLV V+  TIGKGF+G  K
Sbjct: 69  IGYFKKQSVPNLRYLHEFQTYKNNE-YQVGKSLDLKEL-DQQLVQVSAYTIGKGFAGYQK 126

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           +H F     +HG S SHR  GS G    PGRVF   KMAGR+G +R ++KNL V+ VD  
Sbjct: 127 KHKFSRGAMSHG-SKSHRRPGSIGAGTTPGRVFPGVKMAGRLGFSRRSIKNLLVLKVDLT 185

Query: 186 RGLILVKGCVPGAKKNSWIL 205
             L L+KG VPG   N  ++
Sbjct: 186 NKLFLLKGSVPGKYGNLLLV 205


>gi|221125421|ref|XP_002162736.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 271

 Score =  171 bits (435), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 68/217 (31%), Positives = 114/217 (52%), Gaps = 10/217 (4%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQV--VVHRTLD--KNGYMAVQVGAGEA 56
           +R G +  KLG++ ++   G    VT++ + +CQV        D   +G   + +G  + 
Sbjct: 13  IRVGALGIKLGVSVLWTKNGFCHMVTLVQIKDCQVIDTQISCEDGGNDGITQMLLGCCDI 72

Query: 57  KVKNV-SKPMRGF---FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
              NV +K  R     +   N+ PK+    F V K+  L P G+  +  +F  GQ V V 
Sbjct: 73  TDDNVLAKLPRDHVLWYDQRNLFPKQYWTGFPVTKNALLFP-GTKITSLHFQPGQHVVVQ 131

Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
           G++I KGF G M+R    G   +HG +++HR  G TG  QDPGR+F  K MAG +G +  
Sbjct: 132 GISIDKGFQGVMRRWGMKGQPQSHGQTLTHRKMGGTGGGQDPGRIFPGKHMAGHVGRDYA 191

Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           TV  L ++ ++ K  ++ ++G +PG +   ++ ++DS
Sbjct: 192 TVGPLRILRINTKFNVLYIRGGIPG-EIGGFLKIKDS 227


>gi|260798664|ref|XP_002594320.1| hypothetical protein BRAFLDRAFT_201187 [Branchiostoma floridae]
 gi|229279553|gb|EEN50331.1| hypothetical protein BRAFLDRAFT_201187 [Branchiostoma floridae]
          Length = 242

 Score =  171 bits (435), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 8/188 (4%)

Query: 28  LHLDNCQVVVHRTLD----KNGYMA-VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFE 82
           + + +C V+ +  ++     +     + +G        +S+     F    + PK+K+ E
Sbjct: 1   VQVQDCHVIRYIPVEDSDDPDKKQGMLTLGHRSCSPFYLSEEYLRMFEKAGIPPKRKIAE 60

Query: 83  FRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISH 142
           F+V  D  + P G+    ++F  GQ VDV G TI KGF G MKRH F G  A+HG + +H
Sbjct: 61  FKVSMDAAIKP-GTPLYAAHFRPGQYVDVYGKTIDKGFQGVMKRHGFKGQPASHGQTKTH 119

Query: 143 RSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNS 202
           R  G+ G     GRV    K+ G MG      + L++  V+ K  ++ V G VPG   + 
Sbjct: 120 RRPGAIGTAGH-GRVLPGTKLPGPMGNVVRYTRGLKIWRVNTKHNILYVNGQVPG-HNDG 177

Query: 203 WILVRDSF 210
           W+ V DS 
Sbjct: 178 WVKVYDSI 185


>gi|70943067|ref|XP_741624.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56520122|emb|CAH76721.1| large ribosomal subunit protein L3, prokaryotic (50S)-like,
           putative [Plasmodium chabaudi chabaudi]
          Length = 223

 Score =  171 bits (433), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 65/211 (30%), Positives = 107/211 (50%), Gaps = 7/211 (3%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           +  +K+ M  +++  G+ IP T++ +     +++R LD  G + +  G    + + + KP
Sbjct: 3   IRGKKIEMRSIFSPNGKLIPATLIKIMPN--IIYRFLD-FGKVGIAYGKPLNESRWILKP 59

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
             G  S +N + K           +    +G +   SY    + V+V G++ GKGFSG +
Sbjct: 60  EIGQISKINSNLKNTCSLTLTPPQN--FVLGQIIDVSYLYNYKYVNVRGLSKGKGFSGVI 117

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR  F     THG S  HR  GS G     GRV K KKM G+ G    T+ NL+++ ++ 
Sbjct: 118 KRWGFRRGPMTHG-SGHHRKPGSIGASTHIGRVLKGKKMPGKDGNKFRTMINLKLLGLNL 176

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           +R  ILV GC+PG  +NS + V  +  + +N
Sbjct: 177 ERNEILVSGCIPG-NRNSDVTVTATRDNKIN 206


>gi|297581436|ref|ZP_06943359.1| ribosomal protein L3 [Vibrio cholerae RC385]
 gi|297534274|gb|EFH73112.1| ribosomal protein L3 [Vibrio cholerae RC385]
          Length = 124

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/125 (50%), Positives = 82/125 (65%), Gaps = 1/125 (0%)

Query: 88  DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGS 147
           + +   VGS  +   F   + VDVTG + GKGF GA+KR NF     THG S+SHR+ GS
Sbjct: 1   NGEEFAVGSELTVELFNEVKKVDVTGTSKGKGFQGAVKRWNFRTQDMTHGNSLSHRAPGS 60

Query: 148 TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVR 207
            G  Q PGRVFK KKMAG MG  RVT +NLE+V VD +R L+L+KG VPGA   + ++V+
Sbjct: 61  IGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVDAERNLLLIKGAVPGATGGN-VIVK 119

Query: 208 DSFKS 212
            + K+
Sbjct: 120 PAVKA 124


>gi|68073103|ref|XP_678466.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56498943|emb|CAH95840.1| large ribosomal subunit protein L3, prokaryotic (50S)-like,
           putative [Plasmodium berghei]
          Length = 221

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 62/199 (31%), Positives = 100/199 (50%), Gaps = 6/199 (3%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R  +  +K+ M  +++  G+ IP T++ +     +++R LD  G + +  G    + + +
Sbjct: 29  RIQIRGKKIEMRSIFSPNGKLIPATLIKIMPN--IIYRFLD-FGKVGIAYGKPLNESRWI 85

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
            KP  G  S +N + K           +    +G +   SY    + V+V G++ GKGFS
Sbjct: 86  LKPEIGQISKINSNFKNTCSLTLTPPQN--FVLGQIIDVSYLYNYKYVNVRGLSKGKGFS 143

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G +KR  F     THG S  HR  GS G     GRV K KKM G+ G    T+ NL+++ 
Sbjct: 144 GVIKRWGFHRGPMTHG-SGHHRKPGSIGASTHVGRVLKGKKMPGKDGNKFRTMINLKLLG 202

Query: 182 VDDKRGLILVKGCVPGAKK 200
           ++ +R  ILV GC+PG + 
Sbjct: 203 LNLERNEILVSGCIPGNRN 221


>gi|221485858|gb|EEE24128.1| 50S ribosomal protein L3, putative [Toxoplasma gondii GT1]
          Length = 394

 Score =  169 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 6/202 (2%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ARK+ MT  ++ +G+  PVT+L +    +V      + G   V       +   V +P
Sbjct: 146 LLARKIDMTACFSPDGQAEPVTLLQVLPATIVQ---FLEYGKAVVSYDLPRRRRLFVKRP 202

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
             G    V  +   +     V+  ++ + +G +   S     + V V  +  GKGF G +
Sbjct: 203 TLGKLQRVGAT-GFETATVTVRPPNEFV-LGQILDVSSLLGAKRVHVRAVKKGKGFQGTV 260

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
            R  F     THG S  HR  GS G   DPGRV    +MAGR      TV+NL V+  + 
Sbjct: 261 SRFGFHRGPMTHG-STHHRGPGSVGAGTDPGRVLPGTRMAGRDKAKVATVRNLRVLGFNP 319

Query: 185 KRGLILVKGCVPGAKKNSWILV 206
           K+ L++V+G VPG    + + V
Sbjct: 320 KQNLLIVRGSVPGWDMRTVVRV 341


>gi|221503775|gb|EEE29459.1| 50S ribosomal protein L3, putative [Toxoplasma gondii VEG]
          Length = 383

 Score =  169 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 6/202 (2%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ARK+ MT  ++ +G+  PVT+L +    +V      + G   V       +   V +P
Sbjct: 135 LLARKIDMTACFSPDGQAEPVTLLQVLPATIVQ---FLEYGKAVVSYDLPRRRRLFVKRP 191

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
             G    V  +   +     V+  ++ + +G +   S     + V V  +  GKGF G +
Sbjct: 192 TLGKLQRVGAT-GFETATVTVRPPNEFV-LGQILDVSSLLGAKRVHVRAVKKGKGFQGTV 249

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
            R  F     THG S  HR  GS G   DPGRV    +MAGR      TV+NL V+  + 
Sbjct: 250 SRFGFHRGPMTHG-STHHRGPGSVGAGTDPGRVLPGTRMAGRDKAKVATVRNLRVLGFNP 308

Query: 185 KRGLILVKGCVPGAKKNSWILV 206
           K+ L++V+G VPG    + + V
Sbjct: 309 KQNLLIVRGSVPGWDMRTVVRV 330


>gi|237835099|ref|XP_002366847.1| 50S ribosomal protein L3, putative [Toxoplasma gondii ME49]
 gi|211964511|gb|EEA99706.1| 50S ribosomal protein L3, putative [Toxoplasma gondii ME49]
          Length = 377

 Score =  169 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 6/202 (2%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++ARK+ MT  ++ +G+  PVT+L +    +V      + G   V       +   V +P
Sbjct: 129 LLARKIDMTACFSPDGQAEPVTLLQVLPATIVQ---FLEYGKAVVSYDLPRRRRLFVKRP 185

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
             G    V  +   +     V+  ++ + +G +   S     + V V  +  GKGF G +
Sbjct: 186 TLGKLQRVGAT-GFETATVTVRPPNEFV-LGQILDVSSLLGAKRVHVRAVKKGKGFQGTV 243

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
            R  F     THG S  HR  GS G   DPGRV    +MAGR      TV+NL V+  + 
Sbjct: 244 SRFGFHRGPMTHG-STHHRGPGSVGAGTDPGRVLPGTRMAGRDKAKVATVRNLRVLGFNP 302

Query: 185 KRGLILVKGCVPGAKKNSWILV 206
           K+ L++V+G VPG    + + V
Sbjct: 303 KQNLLIVRGSVPGWDMRTVVRV 324


>gi|308801038|ref|XP_003075300.1| putative 50S ribosomal protein L3 (ISS) [Ostreococcus tauri]
 gi|116061854|emb|CAL52572.1| putative 50S ribosomal protein L3 (ISS) [Ostreococcus tauri]
          Length = 338

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 70/176 (39%), Positives = 94/176 (53%), Gaps = 6/176 (3%)

Query: 37  VHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGS 96
             +T   +GY AVQVG    K + ++KP  G          + L EFR++   +   VG+
Sbjct: 157 RVKTEATDGYNAVQVGYDAVKERQLTKPEAGHCKKAGAPALRHLEEFRLRDAPE-YEVGA 215

Query: 97  VFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
             +    F  G  VDV G +IGKGF GA+KR+ F     THG S SHR HGS G   +PG
Sbjct: 216 KINVSELFKEGDKVDVRGRSIGKGFQGAVKRYGFSRGLMTHG-SKSHRQHGSIGSGTNPG 274

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
           R++  K+M G MG   VT+K L V+SV  +   I+VKG VPG K  +   V  + K
Sbjct: 275 RIYPGKRMHGHMGDEMVTIKGLTVMSV--EDDCIIVKGNVPG-KSGALCKVTPNKK 327



 Score = 47.8 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 3  SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDK 43
           G    K GMT V+  EG  +PVTV+ + +   V   R  + 
Sbjct: 37 VGAFGSKAGMTHVFTPEGLCVPVTVIAVREGNVVTQVRDGEN 78


>gi|323354876|gb|EGA86709.1| Mrpl9p [Saccharomyces cerevisiae VL3]
          Length = 148

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 73/148 (49%), Positives = 101/148 (68%), Gaps = 1/148 (0%)

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M G F+S  V+PK+ + EFRV+ +  L+P G++  PS+F  GQ VDV  ++ GKGF+G M
Sbjct: 1   MLGHFASKVVNPKEXVAEFRVKDEKGLIPPGTLLKPSFFKEGQYVDVRSVSKGKGFTGVM 60

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR+ F GLRA+HG SI HR  GS G  QDPGRV   +KM G MG   VT++N++V+ VDD
Sbjct: 61  KRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVLKVDD 120

Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +  +I VKG V G  KNS++ ++D+ K 
Sbjct: 121 ENNVIWVKGSVAGP-KNSFVKIQDAIKK 147


>gi|330722458|gb|EGH00293.1| LSU ribosomal protein L3p (L3e) [gamma proteobacterium IMCC2047]
          Length = 141

 Score =  168 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 69/142 (48%), Positives = 86/142 (60%), Gaps = 4/142 (2%)

Query: 71  SVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
               +  +   E   + D + + VG   +   F  GQ VDVTG + GKGF+G +KR NF 
Sbjct: 2   KAGSALNESRVE---EADLEGVNVGDELTVERFEAGQKVDVTGQSKGKGFAGGVKRWNFK 58

Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
              ATHG SISHR+ GS G  Q PGRVFK KKMAG MG  +VT + LE+V VD +R LIL
Sbjct: 59  MQDATHGNSISHRAPGSIGQCQTPGRVFKGKKMAGHMGAAQVTTQGLEIVRVDAERNLIL 118

Query: 191 VKGCVPGAKKNSWILVRDSFKS 212
           VKG VPGA     +LVR + K+
Sbjct: 119 VKGAVPGAPGGD-VLVRPTVKA 139


>gi|328478154|gb|EGF48001.1| 50S ribosomal protein L3 [Lactobacillus rhamnosus MTCC 5462]
          Length = 159

 Score =  166 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 58/163 (35%), Positives = 87/163 (53%), Gaps = 5/163 (3%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +G G+ +    +KP  G     + +PK+ + E R         VGS      F  G +VD
Sbjct: 1   MGYGDMREVLTNKPSVGHAKKADTTPKRFVREIR-DVALSDYEVGSEVKADEFAAGDIVD 59

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           VTG + G G+ G +K+         HG S  HR  GS G      +VFK KK+ GRMG +
Sbjct: 60  VTGTSKGHGYQGNIKKDGQSRGPMAHG-SRYHRRPGSLGAI--INKVFKGKKLPGRMGNH 116

Query: 171 RVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
             T++NL+VV+ D +  ++L+KG VPGA K S++ +R + K+A
Sbjct: 117 TRTMQNLQVVAADTEHNVLLIKGNVPGANK-SFVTIRSAVKAA 158


>gi|30468182|ref|NP_849069.1| ribosomal protein L3 [Cyanidioschyzon merolae strain 10D]
 gi|30409282|dbj|BAC76231.1| 50S ribosomal protein L3 [Cyanidioschyzon merolae strain 10D]
          Length = 203

 Score =  165 bits (418), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 71/200 (35%), Positives = 104/200 (52%), Gaps = 28/200 (14%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++A K+GM+ +++ +G  +PVT +     +V+ HRT +K+GY A+ V             
Sbjct: 28  LLATKIGMSQLFDEKGNALPVTWVKSGVHEVIDHRTPEKHGYTALVV------------- 74

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSY-FTVGQLVDVTGMTIGKGFSGA 123
                       +  + EFRV K     P+G     S  F +GQ V V   TIGKGF+G 
Sbjct: 75  ----------RYQHWIREFRV-KHLSAYPIGRRLDLSTCFQIGQKVSVKAKTIGKGFAGY 123

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
            KRH+F     +HG S +HR  GS G    PGRVF   +MAGR+GGN  T+K LE++ + 
Sbjct: 124 QKRHHFARGPMSHG-SKNHRQPGSIGAGTFPGRVFPGTRMAGRLGGNFCTIKGLEILQIQ 182

Query: 184 DKRGLILVKGCVPGAKKNSW 203
           + +  + +KG VPG   N  
Sbjct: 183 NDQ--MALKGAVPGKVGNLL 200


>gi|48645|emb|CAA32542.1| ribosomal protein L3 [Yersinia pseudotuberculosis]
          Length = 129

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 66/131 (50%), Positives = 84/131 (64%), Gaps = 2/131 (1%)

Query: 82  EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSIS 141
           EFR+ +  +    G   S   F   + VDVTG + GKGF+G +KR NF    ATHG S+S
Sbjct: 1   EFRLPEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLS 59

Query: 142 HRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKN 201
           HR  GS G  Q PG+VFK KKMAG MG  RVTV++L+VV VD +R L+LVKG VPGA   
Sbjct: 60  HRVPGSIGQNQTPGKVFKGKKMAGHMGDERVTVQSLDVVRVDAERNLLLVKGAVPGATGG 119

Query: 202 SWILVRDSFKS 212
           + I V+ + K+
Sbjct: 120 NLI-VKPAVKA 129


>gi|254449764|ref|ZP_05063201.1| ribosomal protein L3 [Octadecabacter antarcticus 238]
 gi|198264170|gb|EDY88440.1| ribosomal protein L3 [Octadecabacter antarcticus 238]
          Length = 163

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 75/129 (58%), Positives = 96/129 (74%), Gaps = 1/129 (0%)

Query: 87  KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146
            +++L+ VG     S++  GQ VDV+G +IGKGF+GAMKRHNF GLRATHGVS+SHRSHG
Sbjct: 2   SEENLIAVGEEIIASHYFEGQFVDVSGTSIGKGFAGAMKRHNFSGLRATHGVSVSHRSHG 61

Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206
           STG  QDPG+VFK KKMAG MG  ++T +NL V+  D  RGLI+VKG VPG+ K  W+ V
Sbjct: 62  STGQCQDPGKVFKGKKMAGHMGSAKITTQNLVVIKTDLDRGLIMVKGAVPGS-KGGWVTV 120

Query: 207 RDSFKSAVN 215
           +D+ K   +
Sbjct: 121 KDAVKKPAS 129


>gi|2500228|sp|P72233|RL3_PLARO RecName: Full=50S ribosomal protein L3
 gi|1679861|emb|CAA67347.1| ribosomal protein L3 [Planobispora rosea]
          Length = 140

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 57/136 (41%), Positives = 80/136 (58%), Gaps = 1/136 (0%)

Query: 3   SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
            GV+ +KLGMT V++ + R +PVTV+    C V   RT +K+GY AVQ+G G+   + V+
Sbjct: 6   KGVLGKKLGMTQVFDADNRMVPVTVVEAGPCVVTRVRTPEKDGYSAVQLGFGQIDPRKVN 65

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           KP+  +     ++P++   E R   D     +G       F  GQ VDVTG + GKGF+G
Sbjct: 66  KPLGDYLRKHEITPRRYFTEIRTD-DASEYTIGQEVLADTFEAGQFVDVTGKSKGKGFAG 124

Query: 123 AMKRHNFGGLRATHGV 138
            MKRH FGGL A+HG 
Sbjct: 125 VMKRHGFGGLGASHGT 140


>gi|125987858|sp|Q85FW3|RK3_CYAME RecName: Full=50S ribosomal protein L3, chloroplastic
          Length = 182

 Score =  162 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 71/200 (35%), Positives = 104/200 (52%), Gaps = 28/200 (14%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++A K+GM+ +++ +G  +PVT +     +V+ HRT +K+GY A+ V             
Sbjct: 7   LLATKIGMSQLFDEKGNALPVTWVKSGVHEVIDHRTPEKHGYTALVV------------- 53

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSY-FTVGQLVDVTGMTIGKGFSGA 123
                       +  + EFRV K     P+G     S  F +GQ V V   TIGKGF+G 
Sbjct: 54  ----------RYQHWIREFRV-KHLSAYPIGRRLDLSTCFQIGQKVSVKAKTIGKGFAGY 102

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
            KRH+F     +HG S +HR  GS G    PGRVF   +MAGR+GGN  T+K LE++ + 
Sbjct: 103 QKRHHFARGPMSHG-SKNHRQPGSIGAGTFPGRVFPGTRMAGRLGGNFCTIKGLEILQIQ 161

Query: 184 DKRGLILVKGCVPGAKKNSW 203
           + +  + +KG VPG   N  
Sbjct: 162 NDQ--MALKGAVPGKVGNLL 179


>gi|156083276|ref|XP_001609122.1| ribosomal protein L3 domain containing protein [Babesia bovis T2Bo]
 gi|154796372|gb|EDO05554.1| ribosomal protein L3 domain containing protein [Babesia bovis]
          Length = 323

 Score =  161 bits (407), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 61/200 (30%), Positives = 91/200 (45%), Gaps = 9/200 (4%)

Query: 9   KLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGF 68
           K+G   +++ +G    VT L +  C +         GY  V  G    + +   +   G 
Sbjct: 121 KVG--QIWSPDGHVETVTALKVLPCTICEFMDF---GYALVAYGKPSWEKRWNLRSELGK 175

Query: 69  FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
               N +    +   ++Q   D + +G +   S F     V VTG+T GKGF+G +KRH 
Sbjct: 176 LIK-NCNNFAYMKPVKLQPPQDYV-LGQILDVSAFAGCTHVKVTGITKGKGFAGVIKRHG 233

Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188
           F     +HG S  HR  GS G    PG V   K+M GRMG  R T + L V+ ++ +  L
Sbjct: 234 FARGPMSHG-SKHHRKPGSIGASTTPGCVKPGKRMPGRMGNKRCTFRKLRVLGINPETSL 292

Query: 189 ILVKGCVPGAKKNSWILVRD 208
           + VK  V GA   S++ V  
Sbjct: 293 MYVKALVAGAN-GSYVSVTS 311


>gi|319955856|ref|YP_004167119.1| LSU ribosomal protein l3p [Nitratifractor salsuginis DSM 16511]
 gi|319418260|gb|ADV45370.1| LSU ribosomal protein L3P [Nitratifractor salsuginis DSM 16511]
          Length = 193

 Score =  161 bits (407), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 64/202 (31%), Positives = 102/202 (50%), Gaps = 15/202 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+   ++    +PVT+L +   +V   R   ++G   V   +G+     ++K +
Sbjct: 4   IVEKIGMSRTIDVP--SVPVTLLKVVETKVCEVR---EDGKALVAYNSGKK----INKAI 54

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     +VS +    +F   +  +    G   S +     Q+V  +  + G+GFSG MK
Sbjct: 55  EGQQKKYSVSNEFN--KFMTLEVAEGTEPGD-LSTAPLAEAQVVKSSFNSKGRGFSGVMK 111

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           RHNF G    HG S  HR+ GS G  + PGRV   +KM G  G  + TVKN EV+S D +
Sbjct: 112 RHNFAGGPGAHG-SRFHRAPGSIGMCEWPGRVQPGQKMPGHYGNAKTTVKN-EVISFDAE 169

Query: 186 RGLILVKGCVPGAKK-NSWILV 206
            G++++KG VPG K     + +
Sbjct: 170 NGILVLKGAVPGPKGARGVVRI 191


>gi|146332291|gb|ABQ22651.1| mitochondrial 39S ribosomal protein L3-like protein [Callithrix
           jacchus]
          Length = 173

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 54/128 (42%), Positives = 69/128 (53%), Gaps = 2/128 (1%)

Query: 88  DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGS 147
           D+  L  G+    ++F  GQ VDVT  TIGKGF G MKR  F G  ATHG + +HR  G+
Sbjct: 8   DNAALKPGTPLYAAHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTHRRPGA 67

Query: 148 TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVR 207
                D  RV+   K+ G+MG    TV  L+V  ++ K  +I V G VPG  KN  + VR
Sbjct: 68  I-STGDVARVWPGTKLPGQMGNIDRTVHGLKVWRINTKHNIIYVNGSVPG-HKNCLVKVR 125

Query: 208 DSFKSAVN 215
           DS   A  
Sbjct: 126 DSKLPAYK 133


>gi|323348471|gb|EGA82716.1| Mrpl9p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 164

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 62/128 (48%), Positives = 87/128 (67%), Gaps = 1/128 (0%)

Query: 90  DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTG 149
            L+P G++  PS+F  GQ VDV  ++ GKGF+G MKR+ F GLRA+HG SI HR  GS G
Sbjct: 12  GLIPPGTLLKPSFFKEGQYVDVRSVSKGKGFTGVMKRYGFKGLRASHGTSIMHRHGGSYG 71

Query: 150 CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
             QDPGRV   +KM G MG   VT++N++V+ VDD+  +I VKG V G  KNS++ ++D+
Sbjct: 72  QNQDPGRVLPGRKMPGHMGNEHVTIQNVKVLKVDDENNVIWVKGSVAGP-KNSFVKIQDA 130

Query: 210 FKSAVNCK 217
            K  ++ +
Sbjct: 131 IKKNLSIR 138


>gi|255644742|gb|ACU22873.1| unknown [Glycine max]
          Length = 177

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 58/128 (45%), Positives = 85/128 (66%), Gaps = 1/128 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+G++A K GM+ +++  G RIP+TVL +D+  V   +T +K G+ A+Q+G G  K K++
Sbjct: 51  RTGLIAVKCGMSALWDKWGARIPITVLWVDDNIVSQIKTPEKEGFCALQIGCGHKKDKHL 110

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
           +KP  G F +  V  K+KL EF V +D  LLPVG+  +  +F  GQ VD++G+T GKGF 
Sbjct: 111 TKPEVGHFRAQGVPMKRKLREFPVTED-ALLPVGTSLNVRHFVPGQFVDISGITKGKGFQ 169

Query: 122 GAMKRHNF 129
           G MKRH F
Sbjct: 170 GVMKRHGF 177


>gi|154148794|ref|YP_001405697.1| 50S ribosomal protein L3 [Campylobacter hominis ATCC BAA-381]
 gi|153804803|gb|ABS51810.1| ribosomal protein L3 [Campylobacter hominis ATCC BAA-381]
          Length = 191

 Score =  158 bits (399), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 16/195 (8%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+    I+   IPVT+L + N ++        +G   V    G+A     +K +
Sbjct: 4   IVEKIGMSR--TIDNPSIPVTLLRVVNAKICEV----NDGKAVVAYANGKA----FNKAI 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     N+S +   F        +   VG   S   F   + V  +  + G+G+ G MK
Sbjct: 54  AGIQKKYNLSKEFNKFA---TLCVENAEVGDQ-SIEIFNNAKFVKSSFTSKGRGYQGVMK 109

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           RH F G   +HG S  HR HGS G  + PGRV    +MAG MG  +VTVKN E+V  D +
Sbjct: 110 RHGFAGGPKSHG-SRFHRRHGSIGNCEWPGRVQPGMRMAGHMGNVKVTVKN-EIVKFDAE 167

Query: 186 RGLILVKGCVPGAKK 200
             ++++KG V G   
Sbjct: 168 NRILVLKGAVAGFNG 182


>gi|291533621|emb|CBL06734.1| 50S ribosomal protein L3, bacterial [Megamonas hypermegale ART12/1]
          Length = 149

 Score =  158 bits (399), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 72/150 (48%), Positives = 90/150 (60%), Gaps = 5/150 (3%)

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M+G F+   V P K + E R+  D      G   S   F  G LVDVTG + GKGF+G +
Sbjct: 1   MKGHFAKAGVEPVKFIRELRL-ADVPEYKAGDSISVDIFGAGDLVDVTGTSKGKGFAGGI 59

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           KRHNF      HG S SHR  GSTG       GRV K KK+ GRMGG +VTV+ L VV V
Sbjct: 60  KRHNFARGPMGHG-SKSHREPGSTGAMISGHGGRVLKGKKLPGRMGGAKVTVQRLSVVRV 118

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D  R LIL+KG +PGA KNS+++++D+ K 
Sbjct: 119 DADRNLILIKGAIPGA-KNSFVVIKDTVKP 147


>gi|85000981|ref|XP_955209.1| 50S ribosomal protein L3 [Theileria annulata strain Ankara]
 gi|65303355|emb|CAI75733.1| 50S ribosomal protein L3, putative [Theileria annulata]
          Length = 328

 Score =  158 bits (399), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 63/234 (26%), Positives = 97/234 (41%), Gaps = 31/234 (13%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV--- 61
           + A K G+  + + +G    VT L +  C ++        GY  V  G       ++   
Sbjct: 99  LRAIKHGVGQITSPDGIVETVTALRVLPCTILQFMDF---GYALVSYGTFNKYATSLLKF 155

Query: 62  -------------------SKPMRGFFSSVNVSPKKKLFEFRVQ-KDDDLLPVGSVFSPS 101
                              ++P  G    ++ +       F V+ +      +G +   S
Sbjct: 156 IKQIFNENIGKPLWTRHWNNRPELGKLIKISAN---NAETFPVKLQPPQDYVLGQLVDVS 212

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F       VTG+T GKGF G +KRH F     +HG S  HR  GS G    PG V   K
Sbjct: 213 SFVGCTHAKVTGITKGKGFQGVIKRHGFKRGPMSHG-SKHHRRPGSIGASTTPGCVKPGK 271

Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           KM GRMGG R T + L+++ ++ +  L+ VKG V G  K S++ V    +  + 
Sbjct: 272 KMPGRMGGKRCTFRKLKILGLNPETSLLYVKGHVAGP-KGSYVTVTSDVQPPLK 324


>gi|3914749|sp|P94799|RL3_ACTAC RecName: Full=50S ribosomal protein L3
 gi|1841322|dbj|BAA10947.1| ribosomal protein L3 [Actinobacillus actinomycetemcomitans]
          Length = 121

 Score =  157 bits (398), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 79/122 (64%), Gaps = 1/122 (0%)

Query: 91  LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
              +G   +   F   + VDVTG + GKGF G +KR NF    ATHG S+SHR  GS G 
Sbjct: 1   EFTLGQEINVDIFADVKKVDVTGTSKGKGFQGGVKRWNFRTQDATHGNSLSHRVLGSIGQ 60

Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
            Q PGRVFK KKMAG +G  RVTV++LEVV VD +R L+LVKG VPGA   S ++V+ + 
Sbjct: 61  NQTPGRVFKGKKMAGHLGNERVTVQSLEVVRVDAERKLLLVKGAVPGA-TGSDVIVKPAV 119

Query: 211 KS 212
           K+
Sbjct: 120 KA 121


>gi|268680587|ref|YP_003305018.1| 50S ribosomal protein L3 [Sulfurospirillum deleyianum DSM 6946]
 gi|268618618|gb|ACZ12983.1| 50S ribosomal protein L3 [Sulfurospirillum deleyianum DSM 6946]
          Length = 192

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 69/195 (35%), Positives = 101/195 (51%), Gaps = 15/195 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+    +    +PVT+L +   +V    ++D+N    V   +G+     ++K +
Sbjct: 4   IIEKIGMSRTIAVP--SVPVTLLRVLEAKVC---SVDENKRALVSYVSGKK----MNKAI 54

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     N+S     F   V  D     VG   S +  +  Q + V+  T G+GF+G +K
Sbjct: 55  AGQQKKYNLSAAFNRF---VTLDVTNTEVGD-LSTAPLSEAQRLKVSLNTKGRGFTGVIK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           RHNF G    HG S  HR+ GS G  + PGRV K KKM G  G  +VTV+N E+VS D +
Sbjct: 111 RHNFHGGPGGHG-SRFHRAPGSIGNCEWPGRVQKGKKMPGHYGNTQVTVQN-EIVSFDAE 168

Query: 186 RGLILVKGCVPGAKK 200
            G++ VKG VPGA  
Sbjct: 169 NGILAVKGSVPGANG 183


>gi|149928568|ref|ZP_01916792.1| ribosomal protein L3 [Limnobacter sp. MED105]
 gi|149822709|gb|EDM81972.1| ribosomal protein L3 [Limnobacter sp. MED105]
          Length = 126

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 67/125 (53%), Positives = 86/125 (68%), Gaps = 1/125 (0%)

Query: 90  DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTG 149
             L VG+  S   F  GQ VDV+G+T GKGFSGA+KRH+F   RA+HG SISH + GS G
Sbjct: 3   AELQVGAAVSAEIFAPGQKVDVSGVTQGKGFSGAIKRHHFSSQRASHGNSISHNAPGSIG 62

Query: 150 CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
             QDPGRVF  K+MAG++G    T +NLEVV VD +RGL+L+KG VPG+ K   +LV+ +
Sbjct: 63  MAQDPGRVFPGKRMAGQLGNVNRTTQNLEVVRVDAERGLLLIKGAVPGS-KGGQLLVKPA 121

Query: 210 FKSAV 214
            K+  
Sbjct: 122 VKAKA 126


>gi|293372118|ref|ZP_06618509.1| 50S ribosomal protein L3 [Bacteroides ovatus SD CMC 3f]
 gi|292632910|gb|EFF51497.1| 50S ribosomal protein L3 [Bacteroides ovatus SD CMC 3f]
          Length = 142

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 61/143 (42%), Positives = 83/143 (58%), Gaps = 4/143 (2%)

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
           M G F    V+PK+ L EF+  + +  L +G   +   F     VDV G + GKGF G +
Sbjct: 1   MMGHFKRAGVTPKRHLAEFK--EFETELNLGDTITVEMFNDASFVDVVGTSKGKGFQGVV 58

Query: 125 KRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           KRH FGG  +ATHG     R  GS G    P +VFK  +M G++GG+RVTV+NL+V+ V 
Sbjct: 59  KRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKVI 118

Query: 184 DKRGLILVKGCVPGAKKNSWILV 206
               L+LVKG +PG  K S +L+
Sbjct: 119 ADHNLLLVKGSIPGC-KGSIVLI 140


>gi|255017007|ref|ZP_05289133.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL F2-515]
          Length = 122

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 1/123 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ RK+GMT V+   G  IPVTV+      V+  +T++ +GY AVQ+G  + +   
Sbjct: 1   MTKGILGRKVGMTQVFTENGELIPVTVIEAAQNVVLQKKTVETDGYEAVQIGFEDKRAIL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
            +KP +G  +  N +PK+ + EFR   + D   +G+      F  G ++D TG++ GKGF
Sbjct: 61  SNKPEQGHVAKANTTPKRFIREFR-DVNLDEYEIGAEVKVDVFAEGDIIDATGVSKGKGF 119

Query: 121 SGA 123
            G 
Sbjct: 120 QGV 122


>gi|152989972|ref|YP_001355694.1| 50S ribosomal protein L3 [Nitratiruptor sp. SB155-2]
 gi|151421833|dbj|BAF69337.1| 50S ribosomal protein L3 [Nitratiruptor sp. SB155-2]
          Length = 192

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 15/195 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+   ++    +PVT+L +   +V     L + G   V    G+ +    +K +
Sbjct: 4   IVEKIGMSRTISVP--SVPVTLLKVKEAKVCE---LLEGGKAIVAYSQGKKR----NKAI 54

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G      +SP+   F   ++        G     +  +  + +  +  + G+GFSG +K
Sbjct: 55  EGQQKKYGLSPEFNRF---IKLKVTNTEAGD-LDVTPLSEAKRIKTSFNSKGRGFSGVVK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NFGG   +HG S  HR+ GS G  + PGR+   +KM G+ G  +VTV+N EVVS D +
Sbjct: 111 RWNFGGGPDSHG-SRFHRAPGSVGMCEWPGRIMPGQKMPGQYGNKKVTVQN-EVVSFDPE 168

Query: 186 RGLILVKGCVPGAKK 200
             +++VKG +PG   
Sbjct: 169 NMILVVKGSIPGPNG 183


>gi|227871802|ref|ZP_03990206.1| possible ribosomal protein L3 [Oribacterium sinus F0268]
 gi|227842365|gb|EEJ52591.1| possible ribosomal protein L3 [Oribacterium sinus F0268]
          Length = 128

 Score =  152 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 50/126 (39%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 87  KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146
           ++ +   V        F  G  VDV+  + GKGF+ A+K++       THG S  HR  G
Sbjct: 5   ENAEEYKVKDEIKADIFAEGDKVDVSATSKGKGFASAIKKYGQHRGPMTHG-SKFHRHQG 63

Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206
           S G    P RV   K M   MG  +VT +NL VV VD ++GLILVKG VPG KK + + +
Sbjct: 64  SNGTSATPSRVLPGKGMPSHMGAVKVTTQNLTVVKVDAEQGLILVKGAVPGPKK-ALVTI 122

Query: 207 RDSFKS 212
           +++ KS
Sbjct: 123 KEAVKS 128


>gi|269866677|ref|XP_002652354.1| LSU ribosomal protein L3P [Enterocytozoon bieneusi H348]
 gi|220062674|gb|EED41701.1| LSU ribosomal protein L3P [Enterocytozoon bieneusi H348]
          Length = 116

 Score =  149 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/115 (52%), Positives = 81/115 (70%), Gaps = 1/115 (0%)

Query: 98  FSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRV 157
                F  GQ VDV+G++ GKGF+GA+KRHNF   RA+HG S+SHR+ GS GCRQ PGRV
Sbjct: 3   IDLDIFAEGQRVDVSGVSKGKGFAGAIKRHNFRSNRASHGNSLSHRAPGSIGCRQTPGRV 62

Query: 158 FKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           FK KKMAG +G  +VT  NLE+V +D  R L+++KG VPGA+    +++R + + 
Sbjct: 63  FKGKKMAGHLGAEQVTTLNLELVRIDANRRLLMIKGAVPGARDGD-VMIRPAVRG 116


>gi|291277268|ref|YP_003517040.1| 50S ribosomal protein L3 [Helicobacter mustelae 12198]
 gi|290964462|emb|CBG40312.1| 50S ribosomal protein L3 [Helicobacter mustelae 12198]
          Length = 192

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 69/192 (35%), Positives = 93/192 (48%), Gaps = 15/192 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+    I+ + I VT+L + + +V       +N    +    G+A     +K +
Sbjct: 4   LVEKIGMSR--TIDTKSIAVTLLRVIDAKVCEIY---ENKKALIAYAKGKAS----NKAI 54

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     N+S   K F            VG     S     Q + VT  T G+GFSGAMK
Sbjct: 55  AGQQKKYNLS---KEFNRFATLQVGNAEVGD-LDKSALENAQRLKVTFKTKGRGFSGAMK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF G  A HG S  HR  GS G R+ PGRV   KKMAG  G   VT +N EVVS D +
Sbjct: 111 RWNFQGGPAAHG-SRFHRRLGSIGNREWPGRVQPGKKMAGHYGNETVTAQN-EVVSFDKE 168

Query: 186 RGLILVKGCVPG 197
             ++++KG V G
Sbjct: 169 SNILVLKGSVAG 180


>gi|154340798|ref|XP_001566352.1| ribosomal protein L3-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134063675|emb|CAM39860.1| ribosomal protein L3-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 467

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 92/219 (42%), Gaps = 8/219 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKVK 59
           +R G+V  K+     Y+  G +   T     + Q+V H T + + G   V VGA    V+
Sbjct: 129 VRFGMVGVKVFTCKDYDDLGNQFDCTAFWFPDNQIVKHSTRNGDVGTDKVYVGAMNVPVE 188

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
                +  F+ +  V  K     F V  D    PVG+     +F  GQ V +T      G
Sbjct: 189 FHKPHVAAFYKAAGVPVKHVSAGFPVTPD-AYAPVGTKLDVRHFKPGQEVTITFQNTDYG 247

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           + G M RH F G     G S   R  G  G  +   R++   +MAG+ G +  T + + V
Sbjct: 248 YQGVMFRHGFDGGYVWLGDSKWQRRPGCMGA-EGQKRIYPGHRMAGQTGASAETYQGVPV 306

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
             +D K  LI +   +  A   +++  RD+     N KG
Sbjct: 307 WRIDYKNSLIYLPTLI-DADVGTYVKFRDTI----NTKG 340


>gi|261838638|gb|ACX98404.1| ribosomal protein L3 [Helicobacter pylori 51]
          Length = 191

 Score =  147 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 90/192 (46%), Gaps = 15/192 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           + +K+GM+    I+    PVT+L +   +V       +NG   V     +      +K +
Sbjct: 4   LVQKIGMSR--TIDANSTPVTLLKVLQAKVCQL----ENGKALVAYAMHKK----YNKAI 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G      +S +     F   K      +G     S     + V  +  T G+GF+G MK
Sbjct: 54  EGQQKKYQLSKEFNH--FATLKASQQQELGD-LDLSTLETLKRVKASFKTKGRGFAGVMK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF G  A HG S  HR  GS G R+ PGRV K +KMAG  G   VT +N EV+S D +
Sbjct: 111 RWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDKE 168

Query: 186 RGLILVKGCVPG 197
             ++++KG V G
Sbjct: 169 SMVLVLKGSVAG 180


>gi|308185071|ref|YP_003929204.1| 50S ribosomal protein L3 [Helicobacter pylori SJM180]
 gi|308060991|gb|ADO02887.1| 50S ribosomal protein L3 [Helicobacter pylori SJM180]
          Length = 191

 Score =  147 bits (373), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 90/192 (46%), Gaps = 15/192 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           + +K+GM+    I+    PVT+L +   +V       +NG   V     +      +K +
Sbjct: 4   LVQKIGMSR--TIDANSTPVTLLKVLQAKVCQL----ENGKALVAYAMHKK----YNKAI 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G      +S +     F   K      +G     S     + V  +  T G+GF+G MK
Sbjct: 54  EGQQKKYQLSKEFNH--FATLKASQQQELGD-LDLSALETLKRVKASFKTKGRGFAGVMK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF G  A HG S  HR  GS G R+ PGRV K +KMAG  G   VT +N EV+S D +
Sbjct: 111 RWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDKE 168

Query: 186 RGLILVKGCVPG 197
             ++++KG V G
Sbjct: 169 SMVLVLKGSVAG 180


>gi|222823103|ref|YP_002574676.1| 50S ribosomal protein L3 [Campylobacter lari RM2100]
 gi|222538324|gb|ACM63425.1| 50S ribosomal protein L3 [Campylobacter lari RM2100]
          Length = 191

 Score =  147 bits (373), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 69/195 (35%), Positives = 97/195 (49%), Gaps = 16/195 (8%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+    I    IPVT+L L   +V       +NG   V    G+A     +K +
Sbjct: 4   IVEKIGMSR--TISTPSIPVTLLKLVQTKVCEV----ENGKALVAYVKGKAN----NKCI 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     N+S +   F      +      G     +      ++ V+  + G+G+SG +K
Sbjct: 54  AGQQKKYNLSAEYNRFA---SLEVANTEAGD-IDLNPLKEASILKVSFNSKGRGYSGVVK 109

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           RH F G  A+HG S  HR HGS G R+ PGRV    KMAG  G  +VTVKN EVVS D++
Sbjct: 110 RHGFAGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGHYGNVKVTVKN-EVVSFDEE 167

Query: 186 RGLILVKGCVPGAKK 200
            G+++VKG VPG   
Sbjct: 168 NGILVVKGAVPGFNG 182


>gi|217033636|ref|ZP_03439064.1| hypothetical protein HP9810_899g72 [Helicobacter pylori 98-10]
 gi|216943982|gb|EEC23416.1| hypothetical protein HP9810_899g72 [Helicobacter pylori 98-10]
 gi|261840034|gb|ACX99799.1| 50S ribosomal protein L3 [Helicobacter pylori 52]
 gi|307637990|gb|ADN80440.1| LSU ribosomal protein L3p:L3e [Helicobacter pylori 908]
 gi|308062604|gb|ADO04492.1| 50S ribosomal protein L3 [Helicobacter pylori Cuz20]
 gi|315587208|gb|ADU41589.1| 50S ribosomal protein L3 [Helicobacter pylori 35A]
 gi|317013106|gb|ADU83714.1| 50S ribosomal protein L3 [Helicobacter pylori Lithuania75]
 gi|317178390|dbj|BAJ56178.1| 50S ribosomal protein L3 [Helicobacter pylori F30]
 gi|317181041|dbj|BAJ58827.1| 50S ribosomal protein L3 [Helicobacter pylori F32]
 gi|317182565|dbj|BAJ60349.1| 50S ribosomal protein L3 [Helicobacter pylori F57]
 gi|325996595|gb|ADZ52000.1| 50S ribosomal protein L3 [Helicobacter pylori 2018]
 gi|325998185|gb|ADZ50393.1| 50S ribosomal protein L3 [Helicobacter pylori 2017]
          Length = 191

 Score =  147 bits (372), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 90/192 (46%), Gaps = 15/192 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           + +K+GM+    I+    PVT+L +   +V       +NG   V     +      +K +
Sbjct: 4   LVQKIGMSR--TIDANSTPVTLLKVLQAKVCQL----ENGKALVAYAMHKKH----NKAI 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G      +S +     F   K      +G     S     + V  +  T G+GF+G MK
Sbjct: 54  EGQQKKYQLSKEFNH--FATLKASQQQELGD-LDLSALETLKRVKASFKTKGRGFAGVMK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF G  A HG S  HR  GS G R+ PGRV K +KMAG  G   VT +N EV+S D +
Sbjct: 111 RWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDKE 168

Query: 186 RGLILVKGCVPG 197
             ++++KG V G
Sbjct: 169 SMVLVLKGSVAG 180


>gi|317014710|gb|ADU82146.1| 50S ribosomal protein L3 [Helicobacter pylori Gambia94/24]
          Length = 191

 Score =  147 bits (372), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 90/192 (46%), Gaps = 15/192 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           + +K+GM+    I+    PVT+L +   +V       +NG   V     +      +K +
Sbjct: 4   LVQKIGMSR--TIDANSTPVTLLKVLQAKVCQL----ENGKALVAYAMHKKH----NKAI 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G      +S +     F   K      +G     S     + V  +  T G+GF+G MK
Sbjct: 54  EGQQKKYQLSKEFNH--FATLKASQQQELGD-LDLSALETLKRVKASFKTKGRGFAGVMK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF G  A HG S  HR  GS G R+ PGRV K +KMAG  G   VT +N EV+S D +
Sbjct: 111 RWNFQGGPAAHG-SRFHRHPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDKE 168

Query: 186 RGLILVKGCVPG 197
             ++++KG V G
Sbjct: 169 SMVLVLKGSVAG 180


>gi|109946759|ref|YP_663987.1| 50S ribosomal protein L3 [Helicobacter acinonychis str. Sheeba]
 gi|109713980|emb|CAJ98988.1| 50S ribosomal protein L3 [Helicobacter acinonychis str. Sheeba]
 gi|317011519|gb|ADU85266.1| 50S ribosomal protein L3 [Helicobacter pylori SouthAfrica7]
          Length = 191

 Score =  147 bits (372), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 90/192 (46%), Gaps = 15/192 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           + +K+GM+    I+    PVT+L +   +V       +NG   V     +      +K +
Sbjct: 4   LVQKIGMSR--TIDANSTPVTLLKVLQAKVCQL----ENGKALVAYAMHKKH----NKAI 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G      +S +     F   K      +G     S     + V  +  T G+GF+G MK
Sbjct: 54  EGQQKKYQLSKEFNH--FATLKASQQKELGD-LDLSALETLKRVKASFKTKGRGFAGVMK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF G  A HG S  HR  GS G R+ PGRV K +KMAG  G   VT +N EV+S D +
Sbjct: 111 RWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDKE 168

Query: 186 RGLILVKGCVPG 197
             ++++KG V G
Sbjct: 169 SMVLVLKGSVAG 180


>gi|224417885|ref|ZP_03655891.1| 50S ribosomal protein L3 [Helicobacter canadensis MIT 98-5491]
 gi|253827224|ref|ZP_04870109.1| 50S ribosomal protein L3 [Helicobacter canadensis MIT 98-5491]
 gi|313141427|ref|ZP_07803620.1| 50S ribosomal protein L3 [Helicobacter canadensis MIT 98-5491]
 gi|253510630|gb|EES89289.1| 50S ribosomal protein L3 [Helicobacter canadensis MIT 98-5491]
 gi|313130458|gb|EFR48075.1| 50S ribosomal protein L3 [Helicobacter canadensis MIT 98-5491]
          Length = 192

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 15/195 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+         IPVT+L +   +V        +G  A+ V   + K   ++K +
Sbjct: 4   LVEKIGMSRTVAKP--SIPVTLLKVKTAKVCEV----LDGGKAL-VAYHQGKT--LNKAI 54

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     N+  +   F      +     VG     +     +   V+  T G+GFSG MK
Sbjct: 55  AGQQKKYNLDKEFNKFA---TIEVGNAEVGD-LDLAILESAKRAKVSFNTKGRGFSGVMK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF G    HG S  HR+ GS G R+ PGRV   KKMAG  G  +VTV+N E++S D +
Sbjct: 111 RWNFQGGPGAHG-SRFHRAPGSIGNREWPGRVQPGKKMAGHYGNEKVTVQN-EIISFDKE 168

Query: 186 RGLILVKGCVPGAKK 200
             ++++KG VPG   
Sbjct: 169 NNVLVLKGSVPGFNG 183


>gi|297380500|gb|ADI35387.1| 50S ribosomal protein L3 [Helicobacter pylori v225d]
          Length = 191

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 89/192 (46%), Gaps = 15/192 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           + +K+GM+    I+    PVT+L +   +V       +NG   V     +      +K +
Sbjct: 4   LVQKIGMSR--TIDANSTPVTLLKVLQAKVCQL----ENGKALVAYAMHKKH----NKAI 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G      +S +     F   K      +G     S     + V  +  T G+GF+G MK
Sbjct: 54  EGQQKKYQLSKEFNH--FATLKASQQQELGD-LDLSALETLKKVKASFKTKGRGFAGVMK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF G  A HG S  HR  GS G R+ PGRV K +KMAG  G   VT +N EV+S D +
Sbjct: 111 RWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDKE 168

Query: 186 RGLILVKGCVPG 197
             ++ +KG V G
Sbjct: 169 SMVLALKGSVAG 180


>gi|237753023|ref|ZP_04583503.1| 50s ribosomal protein l3 [Helicobacter winghamensis ATCC BAA-430]
 gi|229375290|gb|EEO25381.1| 50s ribosomal protein l3 [Helicobacter winghamensis ATCC BAA-430]
          Length = 192

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 66/195 (33%), Positives = 94/195 (48%), Gaps = 15/195 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+         IPVT+L +   +V       + G   V    G++     +K +
Sbjct: 4   LVEKIGMSRTIGKP--SIPVTLLKVKTAKVCEVL---EGGKALVAYHQGKS----TNKSI 54

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     N+  +   F      + +   VG     S     +   V+  T G+GFSG MK
Sbjct: 55  AGQQKKYNLDKEYNRFA---TLEVNNTEVGD-LDFSSLENAKRAKVSFNTKGRGFSGVMK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF G  A HG S  HR+ GS G R+ PGRV   KKMAG  G  +VTV+N E+VS D +
Sbjct: 111 RWNFQGGPAAHG-SRFHRAPGSIGNREWPGRVQPGKKMAGHYGNEKVTVQN-EIVSFDKE 168

Query: 186 RGLILVKGCVPGAKK 200
            G++++KG VPG   
Sbjct: 169 HGVLVLKGSVPGFNG 183


>gi|15612304|ref|NP_223957.1| 50S ribosomal protein L3 [Helicobacter pylori J99]
 gi|7674309|sp|Q9ZJR4|RL3_HELPJ RecName: Full=50S ribosomal protein L3
 gi|4155816|gb|AAD06790.1| 50S RIBOSOMAL PROTEIN L3 [Helicobacter pylori J99]
          Length = 191

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 90/192 (46%), Gaps = 15/192 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           + +K+GM+    I+    PVT+L +   +V       +NG   V     +      +K +
Sbjct: 4   LVQKIGMSR--TIDANSTPVTLLKVLQAKVCQL----ENGKALVAYAMHKK----YNKAI 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G      +S +     F   K      +G     S     + V  +  T G+GF+G MK
Sbjct: 54  EGQQKKYQLSKEFNH--FATLKASQQKELGD-LDLSALETLKRVKASFKTKGRGFAGVMK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF G  A HG S  HR  GS G R+ PGRV K +KMAG  G   VT +N EV+S D +
Sbjct: 111 RWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDKE 168

Query: 186 RGLILVKGCVPG 197
             ++++KG V G
Sbjct: 169 SMVLVLKGSVAG 180


>gi|254779861|ref|YP_003057967.1| 50S ribosomal protein L3 [Helicobacter pylori B38]
 gi|254001773|emb|CAX30004.1| 50S ribosomal subunit protein L3 [Helicobacter pylori B38]
          Length = 191

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 90/192 (46%), Gaps = 15/192 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           + +K+GM+    I+    PVT+L +   +V       +NG   V     +      +K +
Sbjct: 4   LVQKIGMSR--TIDANSTPVTLLKVLQAKVCQL----ENGKALVAYAMHKKH----NKAI 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G      +S +     F   K      +G     S     + V  +  T G+GF+G MK
Sbjct: 54  EGQQKKYQLSKEFNH--FATLKASQQKELGD-LDLSTLETLKRVKASFKTKGRGFAGVMK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF G  A HG S  HR  GS G R+ PGRV K +KMAG  G   VT +N EV+S D +
Sbjct: 111 RWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDKE 168

Query: 186 RGLILVKGCVPG 197
             ++++KG V G
Sbjct: 169 SMVLVLKGSVAG 180


>gi|308064096|gb|ADO05983.1| 50S ribosomal protein L3 [Helicobacter pylori Sat464]
          Length = 191

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 89/192 (46%), Gaps = 15/192 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           + +K+GM+    I+    PVT+L +   +V       +NG   V     +      +K +
Sbjct: 4   LVQKIGMSR--TIDANSTPVTLLKVLQAKVCQL----ENGKALVAYAMHKKH----NKAI 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G      +S +     F   K      +G     S     + V  +  T G+GF+G MK
Sbjct: 54  EGQQKKYQLSKEFNH--FATLKASQQQELGD-LDLSALETLKRVKASFKTKGRGFAGVMK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF G  A HG S  HR  GS G R+ PGRV K +KMAG  G   VT +N EV+S D +
Sbjct: 111 RWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDKE 168

Query: 186 RGLILVKGCVPG 197
             ++ +KG V G
Sbjct: 169 SMVLALKGSVAG 180


>gi|15645932|ref|NP_208111.1| 50S ribosomal protein L3 [Helicobacter pylori 26695]
 gi|108563689|ref|YP_628005.1| 50S ribosomal protein L3 [Helicobacter pylori HPAG1]
 gi|208435216|ref|YP_002266882.1| ribosomal protein L3 [Helicobacter pylori G27]
 gi|210135476|ref|YP_002301915.1| 50S ribosomal protein L3 [Helicobacter pylori P12]
 gi|217032072|ref|ZP_03437572.1| hypothetical protein HPB128_16g32 [Helicobacter pylori B128]
 gi|298735656|ref|YP_003728181.1| 50S ribosomal protein L3 [Helicobacter pylori B8]
 gi|2500226|sp|P56031|RL3_HELPY RecName: Full=50S ribosomal protein L3
 gi|2314481|gb|AAD08358.1| ribosomal protein L3 (rpl3) [Helicobacter pylori 26695]
 gi|107837462|gb|ABF85331.1| ribosomal protein L3 [Helicobacter pylori HPAG1]
 gi|208433145|gb|ACI28016.1| ribosomal protein L3 [Helicobacter pylori G27]
 gi|210133444|gb|ACJ08435.1| 50S ribosomal protein L3 [Helicobacter pylori P12]
 gi|216946220|gb|EEC24828.1| hypothetical protein HPB128_16g32 [Helicobacter pylori B128]
 gi|298354845|emb|CBI65717.1| large subunit ribosomal protein L3 [Helicobacter pylori B8]
 gi|317010002|gb|ADU80582.1| 50S ribosomal protein L3 [Helicobacter pylori India7]
 gi|317178058|dbj|BAJ55847.1| 50S ribosomal protein L3 [Helicobacter pylori F16]
          Length = 191

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 90/192 (46%), Gaps = 15/192 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           + +K+GM+    I+    PVT+L +   +V       +NG   V     +      +K +
Sbjct: 4   LVQKIGMSR--TIDANSTPVTLLKVLQAKVCQL----ENGKALVAYAMHKKH----NKAI 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G      +S +     F   K      +G     S     + V  +  T G+GF+G MK
Sbjct: 54  EGQQKKYQLSKEFNH--FATLKASQQKELGD-LDLSALETLKRVKASFKTKGRGFAGVMK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF G  A HG S  HR  GS G R+ PGRV K +KMAG  G   VT +N EV+S D +
Sbjct: 111 RWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDKE 168

Query: 186 RGLILVKGCVPG 197
             ++++KG V G
Sbjct: 169 SMVLVLKGSVAG 180


>gi|242309319|ref|ZP_04808474.1| 50s ribosomal protein L3 [Helicobacter pullorum MIT 98-5489]
 gi|239523890|gb|EEQ63756.1| 50s ribosomal protein L3 [Helicobacter pullorum MIT 98-5489]
          Length = 192

 Score =  146 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 64/195 (32%), Positives = 94/195 (48%), Gaps = 15/195 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+         IPVT+L + N +V       + G   V    G++    ++K +
Sbjct: 4   LVEKIGMSRTVAKP--SIPVTLLKVKNAKVCEVL---EGGKALVAYHQGKS----INKSI 54

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     N+  +   F      + +    G     S     +   V+  T G+GFSG MK
Sbjct: 55  AGQQKKYNLDKEYNKFA---TLEVNNTEAGD-LDLSVLENAKRAKVSFNTKGRGFSGVMK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF G    HG S  HR+ GS G R+ PGRV   KKMAG  G  +VTV+N E++S D +
Sbjct: 111 RWNFQGGPGAHG-SRFHRAPGSIGNREWPGRVQPGKKMAGHYGNEKVTVQN-EIISFDKE 168

Query: 186 RGLILVKGCVPGAKK 200
            G++++KG VPG   
Sbjct: 169 HGVLVLKGSVPGFNG 183


>gi|118474609|ref|YP_891244.1| 50S ribosomal protein L3 [Campylobacter fetus subsp. fetus 82-40]
 gi|118413835|gb|ABK82255.1| ribosomal protein L3 [Campylobacter fetus subsp. fetus 82-40]
          Length = 192

 Score =  146 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 62/195 (31%), Positives = 90/195 (46%), Gaps = 15/195 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+    +     PVT+L L   +V     L + G   V     +A     +K +
Sbjct: 4   IVEKIGMSR--TVSAPSTPVTLLRLVPAKVCE---LGEGGKAIVAYAHTKAD----NKAI 54

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
           +G      +S +   F             G     +     +++ V+  T G+GF G +K
Sbjct: 55  KGQQKKYGLSSEFNSFA---TLSVANSEAGD-LDVNPLNEAKVLKVSFNTKGRGFQGVIK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           RH F G  A+HG S  HR  GS G  + PGRV   +KMAG  G  + TVKN EVVS D  
Sbjct: 111 RHGFSGGPASHG-SRFHRRPGSIGNCEWPGRVQPGRKMAGHYGNEKTTVKN-EVVSFDSA 168

Query: 186 RGLILVKGCVPGAKK 200
            G++++KG VPG   
Sbjct: 169 NGILVLKGSVPGFNG 183


>gi|257458708|ref|ZP_05623832.1| 50S ribosomal protein L3 [Campylobacter gracilis RM3268]
 gi|257443897|gb|EEV19016.1| 50S ribosomal protein L3 [Campylobacter gracilis RM3268]
          Length = 192

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 59/195 (30%), Positives = 92/195 (47%), Gaps = 15/195 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+    I+    PVT+L L N ++        +   A+ V   + K    +K +
Sbjct: 4   IVEKIGMSR--TIDTSSTPVTLLRLINTKICEV----CDEKKAI-VAYADGKAY--NKAI 54

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     ++S +   F        +   +G   +    +  ++V V+  + GKG+ G +K
Sbjct: 55  AGIQKKYSLSKEFNKFA---TLSLENAELGDQ-NLDVLSEAKIVKVSFRSKGKGYQGVIK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           RH F G  A HG S  HR  GS G  + PGRV    +MAG  G   +T KN EVVS D +
Sbjct: 111 RHGFAGGPAAHG-SRFHRRPGSIGNCEWPGRVQPGMRMAGHTGNETITAKN-EVVSFDAE 168

Query: 186 RGLILVKGCVPGAKK 200
             ++++KG VPG   
Sbjct: 169 NKILVLKGSVPGFNG 183


>gi|207091947|ref|ZP_03239734.1| 50S ribosomal protein L3 [Helicobacter pylori HPKX_438_AG0C1]
          Length = 191

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 90/192 (46%), Gaps = 15/192 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           + +K+GM+    I+    PVT+L +   +V       +NG   V     +      +K +
Sbjct: 4   LVQKIGMSR--TIDANSTPVTLLKVLQAKVCQL----ENGKALVAYAMHKKH----NKAI 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G      +S +     F   K      +G     S     + V  +  T G+GF+G MK
Sbjct: 54  EGQQKKYQLSKEFNH--FATLKASQQKELGD-LDLSALETLKRVKASFKTKGRGFAGVMK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF G  A HG S  HR  GS G R+ PGRV K +KMAG  G   VT +N EV+S D +
Sbjct: 111 RWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDKE 168

Query: 186 RGLILVKGCVPG 197
             ++++KG V G
Sbjct: 169 SMVLVLKGSVAG 180


>gi|188528107|ref|YP_001910794.1| 50S ribosomal protein L3 [Helicobacter pylori Shi470]
 gi|308183429|ref|YP_003927556.1| 50S ribosomal protein L3 [Helicobacter pylori PeCan4]
 gi|188144347|gb|ACD48764.1| 50S ribosomal protein L3 [Helicobacter pylori Shi470]
 gi|308065614|gb|ADO07506.1| 50S ribosomal protein L3 [Helicobacter pylori PeCan4]
          Length = 191

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 89/192 (46%), Gaps = 15/192 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           + +K+GM+    I+    PVT+L +   +V       +NG   V     +      +K +
Sbjct: 4   LVQKIGMSR--TIDANSTPVTLLKVLQAKVCQL----ENGKALVAYAMHKKH----NKAI 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G      +S +     F   K      +G     S     + V  +  T G+GF+G MK
Sbjct: 54  EGQQKKYQLSKEFNH--FATLKASQQKELGD-LDLSALETLKRVKASFKTKGRGFAGVMK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF G  A HG S  HR  GS G R+ PGRV K +KMAG  G   VT +N EV+S D +
Sbjct: 111 RWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDKE 168

Query: 186 RGLILVKGCVPG 197
             ++ +KG V G
Sbjct: 169 SMVLALKGSVAG 180


>gi|154175439|ref|YP_001409153.1| 50S ribosomal protein L3 [Campylobacter curvus 525.92]
 gi|153793233|gb|EAT99616.2| ribosomal protein L3 [Campylobacter curvus 525.92]
          Length = 192

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 96/195 (49%), Gaps = 15/195 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+    I  +  PVT+L L   +V      + +      V     K    +K +
Sbjct: 4   IVEKIGMSR--TISTQSTPVTLLKLVEAKVC-----EIDENKRAIVAYAHTKAN--NKTI 54

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     N++ +   F      +     VG+    +  +  +++ V+  + G+G+ G +K
Sbjct: 55  AGQQKKYNLTAEFNKFA---TLEVANSEVGN-LDFTPLSEAKILKVSFNSKGRGYQGVVK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           RH F G   +HG S  HR HGS G  + PGRV    KMAG MG  +VTVKN E+VS D +
Sbjct: 111 RHGFSGGPKSHG-SRFHRRHGSIGNCEWPGRVQPGMKMAGHMGNEKVTVKN-ELVSFDAE 168

Query: 186 RGLILVKGCVPGAKK 200
            G+++VKGCVPG   
Sbjct: 169 NGIVVVKGCVPGHNG 183


>gi|322500651|emb|CBZ35728.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 467

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 90/219 (41%), Gaps = 8/219 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKVK 59
           +R G++  K      Y+  G +   T     + Q+V H T + + G   V VGA    V+
Sbjct: 129 VRFGMIGVKAFTCKDYDELGNQFDCTAFWFPDNQIVKHSTRNGDVGTDKVYVGAMNVPVE 188

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
                +  F+ +  V  K     F V  D    PVG+     +F  GQ V +T      G
Sbjct: 189 FHKPHVAAFYKAAGVPVKHVSAGFPVTPD-AYAPVGTKLDVRHFKPGQEVTITFQNTDYG 247

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           + G M RH F G     G S   R  G  G  +   R++   +MAG+ G +  T   + V
Sbjct: 248 YQGVMFRHGFDGGYVWLGDSKWQRRPGCMGA-EGQKRIYPGHRMAGQTGASAETYDGVPV 306

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
             +D K  LI +   +  A   +++  RD+     N KG
Sbjct: 307 WRIDYKNSLIYLPTLI-DADVGTYVKFRDTI----NTKG 340


>gi|322488784|emb|CBZ24031.1| ribosomal protein L3-like protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 467

 Score =  145 bits (367), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 90/219 (41%), Gaps = 8/219 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKVK 59
           +R G++  K      Y+  G +   T     + Q+V H T + + G   V VGA    V+
Sbjct: 129 VRFGLIGVKAFTCKDYDDLGNQFDCTAFWFPDNQIVKHSTRNGDVGTDKVYVGAMNVPVE 188

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
                +  F+ +  V  K     F +  D    PVG+     +F  GQ V +T      G
Sbjct: 189 FHKPHVAAFYKAAGVPVKHVSAGFPITPD-AYAPVGTKLDVRHFKPGQEVTITFQNTDYG 247

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           + G M RH F G     G S   R  G  G  +   R++   +MAG+ G +  T   + V
Sbjct: 248 YQGVMFRHGFDGGYVWLGDSKWQRRPGCMGA-EGQKRIYPGHRMAGQTGASAETYDGVPV 306

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
             +D K  LI +   +  A   +++  RD+     N KG
Sbjct: 307 WRIDYKNSLIYLPTLI-DADVGTYVKFRDTI----NTKG 340


>gi|73536476|ref|XP_847662.1| ribosomal protein L3-like protein [Leishmania major strain
           Friedlin]
 gi|321438575|emb|CBZ12334.1| ribosomal protein L3-like protein [Leishmania major strain
           Friedlin]
          Length = 467

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 90/219 (41%), Gaps = 8/219 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKVK 59
           +R G++  K      Y+  G +   T     + Q+V H T + + G   V VGA    V+
Sbjct: 129 VRFGMIGVKAFTCKDYDDLGNQFDCTAFWFPDNQIVKHSTRNGDVGTDKVYVGAMNVPVE 188

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
                +  F+ +  V  K     F V  D    PVG+     +F  GQ V +T      G
Sbjct: 189 FHKPHVAAFYKAAGVPVKHVSAGFPVTPD-AYAPVGTKLDVRHFKPGQEVTITFQNTDYG 247

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           + G M RH F G     G S   R  G  G  +   R++   +MAG+ G +  T   + V
Sbjct: 248 YQGVMFRHGFDGGYVWLGDSKWQRRPGCMGA-EGQKRIYPGHRMAGQTGASAETYDGVPV 306

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
             +D K  LI +   +  A   +++  RD+     N KG
Sbjct: 307 WRIDYKNSLIYLPTLI-DADVGTYVKFRDTI----NTKG 340


>gi|146092753|ref|XP_001466509.1| ribosomal protein L3-like protein [Leishmania infantum]
 gi|134070872|emb|CAM69548.1| ribosomal protein L3-like protein [Leishmania infantum JPCM5]
          Length = 467

 Score =  144 bits (365), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 90/219 (41%), Gaps = 8/219 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKVK 59
           +R G++  K      Y+  G +   T     + Q+V H T + + G   V VGA    V+
Sbjct: 129 VRFGMIGVKAFTCKDYDDLGNQFDCTAFWFPDNQIVKHSTRNGDVGTDKVYVGAMNVPVE 188

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
                +  F+ +  V  K     F V  D    PVG+     +F  GQ V +T      G
Sbjct: 189 FHKPHVAAFYKAAGVPVKHVSAGFPVTPD-AYAPVGTKLDVRHFKPGQEVTITFQNTDYG 247

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           + G M RH F G     G S   R  G  G  +   R++   +MAG+ G +  T   + V
Sbjct: 248 YQGVMFRHGFDGGYVWLGDSKWQRRPGCMGA-EGQKRIYPGHRMAGQTGASAETYDGVPV 306

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
             +D K  LI +   +  A   +++  RD+     N KG
Sbjct: 307 WRIDYKNSLIYLPTLI-DADVGTYVKFRDTI----NTKG 340


>gi|322821701|gb|EFZ27955.1| mitochondrial ribosomal protein L3, putative [Trypanosoma cruzi]
          Length = 425

 Score =  144 bits (364), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 90/219 (41%), Gaps = 8/219 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKVK 59
           +R G+V  K      Y+  G +   T     + Q+V H T + + G   V VGA    V+
Sbjct: 88  VRFGMVGVKAFTCKDYDELGNQFDCTAFWFPDNQIVRHSTRNGDVGTDRVYVGAMNVPVE 147

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
                +  F+ +  V  K     F +  D    PVG+     +F  GQ V +T      G
Sbjct: 148 FHKPHVAAFYKAAGVPVKHVCAGFPITPD-AYAPVGTKLDVRHFKPGQEVTITFQNTDYG 206

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G M RH F G     G S   R  G  G  +   R++   +MAG+ G +  T + + V
Sbjct: 207 FRGVMFRHGFDGGYVWLGDSKWQRRPGCMGT-EGQKRIYPGHRMAGQTGASAETYQGVPV 265

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
             +D K  LI +   +  A   +++   D+     N KG
Sbjct: 266 WRIDYKNALIYLPTLI-DADVGTYVKFSDTI----NTKG 299


>gi|71411062|ref|XP_807797.1| mitochondrial ribosomal protein L3 [Trypanosoma cruzi strain CL
           Brener]
 gi|70871872|gb|EAN85946.1| mitochondrial ribosomal protein L3, putative [Trypanosoma cruzi]
          Length = 473

 Score =  144 bits (364), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 90/219 (41%), Gaps = 8/219 (3%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKVK 59
           +R G+V  K      Y+  G +   T     + Q+V H T + + G   V VGA    V+
Sbjct: 136 VRFGMVGVKAFTCKDYDELGNQFDCTAFWFPDNQIVRHSTRNGDVGTDRVYVGAMNVPVE 195

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
                +  F+ +  V  K     F +  D    PVG+     +F  GQ V +T      G
Sbjct: 196 FHKPHVAAFYKAAGVPVKHVCAGFPITPD-AYAPVGTKLDVRHFKPGQEVTITFQNTDYG 254

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G M RH F G     G S   R  G  G  +   R++   +MAG+ G +  T + + V
Sbjct: 255 FRGVMFRHGFDGGYVWLGDSKWQRRPGCMGT-EGQKRIYPGHRMAGQTGASAETYQGVPV 313

Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
             +D K  LI +   +  A   +++   D+     N KG
Sbjct: 314 WRIDYKNALIYLPTLI-DADVGTYVKFSDTI----NTKG 347


>gi|255321773|ref|ZP_05362928.1| 50S ribosomal protein L3 [Campylobacter showae RM3277]
 gi|255301253|gb|EET80515.1| 50S ribosomal protein L3 [Campylobacter showae RM3277]
          Length = 192

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 62/195 (31%), Positives = 95/195 (48%), Gaps = 15/195 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+    +    IPVT+L + N +V       + G   V    G+AK    +K +
Sbjct: 4   IVEKIGMSR--TVNNPSIPVTLLKVVNAKVCEV---SECGCAIVAYAKGKAK----NKAI 54

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     +++ +   F             G     S  +  +++ V+  + GKG+ G +K
Sbjct: 55  EGQQKKYSLTAEFNKFA---TLQVANKEAGD-LDISPLSSAKILKVSFSSKGKGYQGVVK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           RH F G   +HG S  H+ HGS G R+ PGRV    KMAG  G  +VTVKN E+VS D +
Sbjct: 111 RHGFAGGPKSHG-SRFHKRHGSIGNREWPGRVQPGMKMAGHTGNEKVTVKN-EIVSFDAE 168

Query: 186 RGLILVKGCVPGAKK 200
            G++++KG V G   
Sbjct: 169 NGILVLKGSVAGYNG 183


>gi|115749008|ref|XP_001195229.1| PREDICTED: similar to mitochondrial ribosomal protein L3
           [Strongylocentrotus purpuratus]
 gi|115922520|ref|XP_001179143.1| PREDICTED: similar to mitochondrial ribosomal protein L3
           [Strongylocentrotus purpuratus]
          Length = 343

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 60/211 (28%), Positives = 90/211 (42%), Gaps = 31/211 (14%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYM---AVQVGAGEAKV 58
           R+GV+A KLGM  ++  EG+R+P T+L +  C V+       NG      V V A  A  
Sbjct: 114 RAGVIAIKLGMQPLWTKEGKRVPTTLLQVLECNVIDFHPQGLNGSDRPGTVLVAAKNAPP 173

Query: 59  KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
               +     F SV +  K+ +  F V  +  L P G+    ++F  G  VD+   TI K
Sbjct: 174 YYKDEEYADLFKSVCLPVKEHITSFNVTDNAALQP-GTPLYAAHFRPGMYVDIAAKTIDK 232

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G MKR    G  A+HG + +HR                                   
Sbjct: 233 GFQGVMKRWGMKGQPASHGATKTHR--------------------------KMGGSGGGG 266

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           V+ V+ K  ++ VKG + G +   ++ V+DS
Sbjct: 267 VLRVNTKHNILYVKGTIHG-RNLGFVKVKDS 296


>gi|21702611|gb|AAM76007.1|AF481103_17 ribosomal protein L3 [Candidatus Tremblaya princeps]
          Length = 205

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 98/204 (48%), Gaps = 8/204 (3%)

Query: 5   VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
           ++  K+GMT + +  G  +PVT+L +     + +     +  +   V       K +S+P
Sbjct: 6   MLGVKVGMTRISSASGGVVPVTILDVSGNTPLRNACRSSDERV---VLYRSVHSKRLSRP 62

Query: 65  MRGFFSSVNVSPKKK--LFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
                   N+ P                +L  G   + +    GQLV +   ++GKGFSG
Sbjct: 63  QLCACIGRNMEPAAYSAWTAQHGMAQHGILACGRPHAKAILRAGQLVSIKARSVGKGFSG 122

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            MKRH F   RA+HG S +HR+ GSTG  QDPGRVF  K+M GRMG    T +NL V  V
Sbjct: 123 VMKRHGFSSGRASHGTSKAHRTLGSTGMSQDPGRVFPGKRMPGRMGCEHATARNLMVEHV 182

Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
                 ++V+G +PG    S + +
Sbjct: 183 --AHDFVMVRGGIPG-HAGSIVAI 203


>gi|72387453|ref|XP_844151.1| ribosomal protein L3 mitochondrial [Trypanosoma brucei TREU927]
 gi|62360659|gb|AAX81070.1| ribosomal protein L3 mitochondrial, putative [Trypanosoma brucei]
 gi|70800683|gb|AAZ10592.1| ribosomal protein L3 mitochondrial, putative [Trypanosoma brucei
           brucei strain 927/4 GUTat10.1]
 gi|261327312|emb|CBH10288.1| ribosomal protein L3 mitochondrial, putative [Trypanosoma brucei
           gambiense DAL972]
          Length = 473

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 61/222 (27%), Positives = 89/222 (40%), Gaps = 14/222 (6%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKVK 59
           +R G+V  K      Y+  G +   T     + QVV H T +   G   V VGA    V+
Sbjct: 136 VRFGMVGVKAFTCKDYDELGNQFDCTAFWFPDNQVVKHSTRNGEVGTDKVYVGAMNVPVE 195

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
                +  F+ +  V  K     F +  D    PVG+     +F  GQ V +T      G
Sbjct: 196 FHKPHVAAFYKAAGVPVKHVCAGFPITPD-AYAPVGTKLDVRHFKPGQEVTITFQNTDYG 254

Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
           F G M RH F G     G S   R  G+ G  +   R++   +MAG+ G    T + + V
Sbjct: 255 FRGVMFRHGFDGGYVWLGDSRWQRRPGAMGT-EGQKRIYPGHRMAGQTGAAAETYQGVPV 313

Query: 180 VSVDDKRGLILVKGCVP---GAKKNSWILVRDSFKSAVNCKG 218
             +D K  LI +    P    A   +++   D+     N KG
Sbjct: 314 WRIDYKNSLIYL----PTLLDADVGTYVRFSDTI----NTKG 347


>gi|57238730|ref|YP_179845.1| 50S ribosomal protein L3 [Campylobacter jejuni RM1221]
 gi|121613090|ref|YP_001001351.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|148926798|ref|ZP_01810477.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|153952159|ref|YP_001398986.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. doylei
           269.97]
 gi|157415929|ref|YP_001483185.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 81116]
 gi|167006240|ref|ZP_02271998.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|205355721|ref|ZP_03222491.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|283956163|ref|ZP_06373648.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 1336]
 gi|305432598|ref|ZP_07401759.1| 50S ribosomal protein L3 [Campylobacter coli JV20]
 gi|315125092|ref|YP_004067096.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|57167534|gb|AAW36313.1| ribosomal protein L3 [Campylobacter jejuni RM1221]
 gi|121504221|gb|EAQ71912.2| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 81-176]
 gi|145844523|gb|EDK21630.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|152939605|gb|ABS44346.1| ribosomal protein L3 [Campylobacter jejuni subsp. doylei 269.97]
 gi|157386893|gb|ABV53208.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 81116]
 gi|205346498|gb|EDZ33131.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|283792317|gb|EFC31101.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 1336]
 gi|304444309|gb|EFM36961.1| 50S ribosomal protein L3 [Campylobacter coli JV20]
 gi|307748567|gb|ADN91837.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni M1]
 gi|315018814|gb|ADT66907.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315059153|gb|ADT73482.1| LSU ribosomal protein L3p [Campylobacter jejuni subsp. jejuni S3]
 gi|315931325|gb|EFV10294.1| ribosomal protein L3 family protein [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 191

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 68/195 (34%), Positives = 95/195 (48%), Gaps = 16/195 (8%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+         I VT+L + N +V       + G   V    G+A     +K +
Sbjct: 4   IVEKIGMSRTITNP--SIAVTLLRVVNAKVCEV----EGGKALVAYPKGKAS----NKCV 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     N+S +   F      +      G     +     +++ V+  T G+G+SG MK
Sbjct: 54  AGQQKKYNLSAEYNRFA---TLEVANTEAGD-LDETPLNEAKILKVSFNTKGRGYSGVMK 109

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           RHNF G  A+HG S  HR HGS G R+ PGRV    KMAG  G  +VTVKN EVVS D +
Sbjct: 110 RHNFAGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGHYGNTKVTVKN-EVVSYDAE 167

Query: 186 RGLILVKGCVPGAKK 200
             +++VKG VPG   
Sbjct: 168 NKILVVKGAVPGYNG 182


>gi|218563293|ref|YP_002345073.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|42559704|sp|Q9PLX1|RL3_CAMJE RecName: Full=50S ribosomal protein L3
 gi|112361000|emb|CAL35801.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|284926898|gb|ADC29250.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315926634|gb|EFV06014.1| ribosomal protein L3 family protein [Campylobacter jejuni subsp.
           jejuni DFVF1099]
 gi|315930642|gb|EFV09664.1| ribosomal protein L3 family protein [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 191

 Score =  142 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 67/195 (34%), Positives = 95/195 (48%), Gaps = 16/195 (8%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+         I VT+L + N +V       + G   V    G+A     +K +
Sbjct: 4   IVEKIGMSRTITNP--SIAVTLLRVVNAKVCEV----EGGKALVAYPKGKAS----NKCV 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     N+S +   F      +      G     +     +++ V+  T G+G+SG MK
Sbjct: 54  AGQQKKYNLSAEYNRFA---TLEVANTEAGD-LDETPLNEAKILKVSFNTKGRGYSGVMK 109

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           RHNF G  A+HG S  HR HGS G R+ PGRV    KMAG  G  +VT+KN EVVS D +
Sbjct: 110 RHNFAGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGHYGNTKVTIKN-EVVSYDAE 167

Query: 186 RGLILVKGCVPGAKK 200
             +++VKG VPG   
Sbjct: 168 NKILVVKGAVPGYNG 182


>gi|315453735|ref|YP_004074005.1| 50S ribosomal protein L3 [Helicobacter felis ATCC 49179]
 gi|315132787|emb|CBY83415.1| 50S ribosomal protein L3 [Helicobacter felis ATCC 49179]
          Length = 190

 Score =  142 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 66/192 (34%), Positives = 93/192 (48%), Gaps = 16/192 (8%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           + +K+GM+ V  +  + +PVT+L +   +V   +         V V     K    +K +
Sbjct: 4   LVQKIGMSRV--VGAQSVPVTLLKVLESKVCEIKDKQ------VLVAYPLHKTH--NKAI 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     N+S   K F      D  +  +G           + +  T  T G+GFSGAMK
Sbjct: 54  AGQQKKYNLS---KEFNHFATLDAQVTELGD-LPLEPLESAKHIKATFYTKGRGFSGAMK 109

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF G  A HG S  HR  GS G R+ PGRV K KKMAG  G  +VT  N EV+S D +
Sbjct: 110 RWNFQGGPAAHG-SRFHRRLGSIGNREWPGRVQKGKKMAGHYGNEKVTCHN-EVLSFDKE 167

Query: 186 RGLILVKGCVPG 197
             ++++KG V G
Sbjct: 168 SKILVLKGSVVG 179


>gi|283953682|ref|ZP_06371213.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 414]
 gi|283794723|gb|EFC33461.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 414]
          Length = 191

 Score =  142 bits (360), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 69/195 (35%), Positives = 96/195 (49%), Gaps = 16/195 (8%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+         I VT+L + N +V       + G   V    G+A     +K +
Sbjct: 4   IVEKIGMSRTITNP--SIAVTLLRIVNVKVCEV----EGGKALVAYPKGKAS----NKCV 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     N+S +   F      +     VG     +     +++ V+  T G+G+SG MK
Sbjct: 54  AGQQKKYNLSAEYNRFA---TLEVVNTEVGD-LDETPLNEAKILKVSFNTKGRGYSGVMK 109

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           RHNF G  A+HG S  HR HGS G R+ PGRV    KMAG  G  +VTVKN EVVS D +
Sbjct: 110 RHNFSGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGHYGNTKVTVKN-EVVSYDAE 167

Query: 186 RGLILVKGCVPGAKK 200
             +++VKG VPG   
Sbjct: 168 NKILVVKGAVPGYNG 182


>gi|157165062|ref|YP_001467720.1| 50S ribosomal protein L3 [Campylobacter concisus 13826]
 gi|157101500|gb|ABV23519.1| ribosomal protein L3 [Campylobacter concisus 13826]
          Length = 192

 Score =  142 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 96/195 (49%), Gaps = 15/195 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+    I  +  PVT+L L   +V      + +      V     K    +K +
Sbjct: 4   IVEKIGMSR--TIATKSTPVTLLKLVEAKVC-----EIDENKRAIVAYAHTKAN--NKAI 54

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     N++ +   F      +     VG+    +     +++ V+  + G+G+ G +K
Sbjct: 55  AGQQKKYNLTAEFNKFA---TLEVANSEVGN-LDFTPLNEAKILKVSFNSKGRGYQGVVK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           RH FGG   +HG S  HR HGS G  + PGRV    KMAG MG  +VTVKN E++S D +
Sbjct: 111 RHGFGGGPKSHG-SRFHRRHGSIGNCEWPGRVQPGMKMAGHMGNEKVTVKN-ELISFDAQ 168

Query: 186 RGLILVKGCVPGAKK 200
            G+++VKGCVPG   
Sbjct: 169 NGIVVVKGCVPGHNG 183


>gi|146319920|ref|YP_001199631.1| 50S ribosomal protein L3 [Streptococcus suis 98HAH33]
 gi|145690726|gb|ABP91231.1| 50S ribosomal protein L3 [Streptococcus suis 98HAH33]
          Length = 112

 Score =  142 bits (358), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 3/115 (2%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYAAVQVGFDDKREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMT 115
            +KP +G  +  N +PK+ + EF   K+ + L VG   +   F  G +VDVTG  
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGQEITVETFAAGDVVDVTGTV 112


>gi|223038516|ref|ZP_03608810.1| 50S ribosomal protein L3 [Campylobacter rectus RM3267]
 gi|222880373|gb|EEF15460.1| 50S ribosomal protein L3 [Campylobacter rectus RM3267]
          Length = 192

 Score =  142 bits (358), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 96/195 (49%), Gaps = 15/195 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+    +    IPVT+L + N +V       + G   V    G+AK    +K +
Sbjct: 4   IVEKIGMSR--TVNNPSIPVTLLKVVNAKVCEV---SECGSAIVAYAKGKAK----NKAI 54

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     +++ +   F             G     S  +  +++ V+  + GKG+ G +K
Sbjct: 55  EGQQKKYSLTAEFNKFA---TLQVANKEAGD-LDFSPLSSAKILKVSFSSKGKGYQGVVK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           RH FGG   +HG S  H+ HGS G R+ PGRV    KMAG  G  +VTVKN E+VS D +
Sbjct: 111 RHGFGGGPKSHG-SRFHKRHGSIGNREWPGRVQPGMKMAGHTGNEKVTVKN-EIVSFDAE 168

Query: 186 RGLILVKGCVPGAKK 200
            G++++KG V G   
Sbjct: 169 NGILVLKGSVAGYNG 183


>gi|322378779|ref|ZP_08053208.1| 50S ribosomal protein L3 [Helicobacter suis HS1]
 gi|322380628|ref|ZP_08054780.1| 50S ribosomal protein L3 [Helicobacter suis HS5]
 gi|321146950|gb|EFX41698.1| 50S ribosomal protein L3 [Helicobacter suis HS5]
 gi|321148809|gb|EFX43280.1| 50S ribosomal protein L3 [Helicobacter suis HS1]
          Length = 194

 Score =  141 bits (357), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 16/192 (8%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           + +K+GM+ +  +    +PVT+L + + +V   +     G + V     +      +K +
Sbjct: 4   LVQKIGMSRI--VGASSVPVTLLKVLDSKVCEIK----EGQLLVAYALHKKH----NKAI 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G      +S   + F         +  VG   S       Q +  T  T G+GFSGAMK
Sbjct: 54  AGQQKKYQLS---QEFNHFATLKGHVEAVGD-LSIEPLEGVQYIKATFYTKGRGFSGAMK 109

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF G  A HG S  HR  GS G R+ PGRV K KKMAG  G  +VT  N +V+S D +
Sbjct: 110 RWNFQGGPAAHG-SRFHRRLGSIGNREWPGRVQKGKKMAGHYGNEKVTCHN-QVLSFDKE 167

Query: 186 RGLILVKGCVPG 197
             ++++KG   G
Sbjct: 168 NKILVLKGSTAG 179


>gi|39938686|ref|NP_950452.1| ribosomal protein L3 [Onion yellows phytoplasma OY-M]
 gi|42559576|sp|P60455|RL3_ONYPE RecName: Full=50S ribosomal protein L3
 gi|39721795|dbj|BAD04285.1| ribosomal protein L3 [Onion yellows phytoplasma OY-M]
          Length = 157

 Score =  141 bits (355), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 57/152 (37%), Positives = 83/152 (54%), Gaps = 9/152 (5%)

Query: 65  MRGFFSSVNVSPKKKLFEFRVQKDDDL----LPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
           M G F     +PK+ + E     D +     L VG++ +   F VG LVDVTG + GKGF
Sbjct: 1   MLGHFKKATTAPKRFIKEINFSADVNSNLANLAVGALITNDLFQVGDLVDVTGTSKGKGF 60

Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
           +G++KRHN      +HG S  HR  GS           K KK+ G MG   VT++NL ++
Sbjct: 61  AGSIKRHNQSRGPESHG-SRYHRRPGSM---GPIKGKLKGKKLPGHMGHETVTIQNLAIL 116

Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           SVD ++ L L+KG VPG  K  +++++ + K 
Sbjct: 117 SVDTEKNLFLIKGNVPGPNKG-FVIIKSAVKK 147


>gi|149195353|ref|ZP_01872439.1| 50S ribosomal protein L3 [Caminibacter mediatlanticus TB-2]
 gi|149134485|gb|EDM22975.1| 50S ribosomal protein L3 [Caminibacter mediatlanticus TB-2]
          Length = 192

 Score =  140 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 62/202 (30%), Positives = 91/202 (45%), Gaps = 16/202 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+       + IPVT+L +   +V   +   ++G   V    G+     V+KP+
Sbjct: 4   IVEKIGMSRTVGE--KSIPVTLLKIVPAKVCEVK---EDGKALVAYPKGKK----VNKPI 54

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G      +S   K F   V+        G   S       + V +T  + G+GF G +K
Sbjct: 55  EGMQKKYGLS---KEFNRFVELKVANTEAGD-LSLEPLNEAKKVKITFKSKGRGFQGVVK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R+   G       S  HR+ GS G  + PGRV   KKM G  G   VTV N EVV  +  
Sbjct: 111 RYG-FGGGPGSHGSRFHRAPGSIGNCEFPGRVMPGKKMPGHYGNKNVTV-NAEVVEFNPD 168

Query: 186 RGLILVKGCVPGAKKNSWILVR 207
            G++++KG VPGA   S   +R
Sbjct: 169 MGVLVIKGSVPGAN-GSLGKIR 189


>gi|152993893|ref|YP_001359614.1| 50S ribosomal protein L3 [Sulfurovum sp. NBC37-1]
 gi|151425754|dbj|BAF73257.1| 50S ribosomal protein L3 [Sulfurovum sp. NBC37-1]
          Length = 193

 Score =  139 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 15/202 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+   ++    +PVT+L + + +V   +   ++G   V   + +     ++K +
Sbjct: 4   IVEKIGMSRTVDVP--SVPVTLLKVVDTKVCEVK---EDGKALVAYNSSKK----LNKSI 54

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G  +   VS +    +F   +  +    G   +P+       V  +  T G+GFSG MK
Sbjct: 55  EGQQTKFGVSKEFN--KFMTIEVAEGTEAGD-LNPAALAEAAAVKTSLNTKGRGFSGGMK 111

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           RHNFGG   +HG     R  GS G  + PGRV K KKM G+ G  +VTVKN +VVS D +
Sbjct: 112 RHNFGGGPGSHG-HRFGRRIGSIGNAEWPGRVQKGKKMPGQYGNTKVTVKN-DVVSFDAE 169

Query: 186 RGLILVKGCVPGAKK-NSWILV 206
            G++++KG +PG       + +
Sbjct: 170 NGILVLKGSIPGHNGARGLVRI 191


>gi|34558027|ref|NP_907842.1| 50S ribosomal protein L3 [Wolinella succinogenes DSM 1740]
 gi|42559590|sp|Q7M8D4|RL3_WOLSU RecName: Full=50S ribosomal protein L3
 gi|34483745|emb|CAE10742.1| 50S RIBOSOMAL PROTEIN L3 [Wolinella succinogenes]
          Length = 192

 Score =  137 bits (347), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 62/195 (31%), Positives = 91/195 (46%), Gaps = 15/195 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+   ++     PVT+L + + +V        NG   V    G+      +K +
Sbjct: 4   LVEKIGMSRTISVP--STPVTLLKVKDAKVCEVL---GNGKALVAYAQGKD----ANKAI 54

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     N+S   K F      +      G     +       V V+  T G+GF+G MK
Sbjct: 55  EGQQKKYNLS---KEFNRFATLEVANGEAGDQ-DVAPLAQAVRVKVSLQTKGRGFTGVMK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF G  A HG     R  GS G R+ PGRV   KKMAG+ G  +VTV+N E+VS D +
Sbjct: 111 RWNFAGGPAAHG-HRFKRRTGSIGNREWPGRVQPGKKMAGQYGNEKVTVQN-EIVSFDAE 168

Query: 186 RGLILVKGCVPGAKK 200
             ++++KG +PG   
Sbjct: 169 NKILVLKGSIPGFNG 183


>gi|315639321|ref|ZP_07894483.1| 50S ribosomal protein L3 [Campylobacter upsaliensis JV21]
 gi|315480647|gb|EFU71289.1| 50S ribosomal protein L3 [Campylobacter upsaliensis JV21]
          Length = 192

 Score =  137 bits (346), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 65/195 (33%), Positives = 96/195 (49%), Gaps = 15/195 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+    +    I VT+L +   +V       + G   V    G+A     +K +
Sbjct: 4   IVEKIGMSR--TVSNPSIAVTLLRVVGAKVCEV---QEGGKALVAYSKGKAN----NKCI 54

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     N+S +   F      +      G     S     +++ V+  + G+G+SG MK
Sbjct: 55  AGMQKKYNLSAEFNKFA---TLEVANTEAGD-LDESPLNEAKILKVSFNSKGRGYSGVMK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           RHNFGG  A+HG S  HR HGS G R+ PGRV    KMAG  G  +V+VKN E+VS D +
Sbjct: 111 RHNFGGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGHYGNAKVSVKN-ELVSYDAE 168

Query: 186 RGLILVKGCVPGAKK 200
             ++++KG VPG   
Sbjct: 169 NKILVLKGAVPGFNG 183


>gi|213423716|ref|ZP_03356696.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 101

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/102 (55%), Positives = 73/102 (71%), Gaps = 1/102 (0%)

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           VTG + GKGF+G +KR NF    ATHG S+SHR  GS G  Q PG+VFK KKMAG+MG  
Sbjct: 1   VTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNE 60

Query: 171 RVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           RVTV++L+VV VD +R L+LVKG VPGA     ++V+ + K+
Sbjct: 61  RVTVQSLDVVRVDAERNLLLVKGGVPGA-TGCDLIVKPAVKA 101


>gi|57505356|ref|ZP_00371285.1| ribosomal protein L3 [Campylobacter upsaliensis RM3195]
 gi|57016492|gb|EAL53277.1| ribosomal protein L3 [Campylobacter upsaliensis RM3195]
          Length = 192

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 64/195 (32%), Positives = 98/195 (50%), Gaps = 15/195 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+    +    I VT+L +   +V       ++G   V    G+A     +K +
Sbjct: 4   IVEKIGMSR--TVSNPSIAVTLLRVVGAKVCEV---QESGKALVAYSKGKAN----NKCI 54

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     N+S +   F      +      G     S     +++ V+  + G+G+SG MK
Sbjct: 55  AGMQKKYNLSAEFNKFA---TLEVANTEAGD-LDESPLNEAKILKVSFNSKGRGYSGVMK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           RHNFGG  A+HG S  HR HGS G R+ PGRV    KMAG+ G  +++VKN E+VS D +
Sbjct: 111 RHNFGGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGQYGNTKISVKN-ELVSYDAE 168

Query: 186 RGLILVKGCVPGAKK 200
             ++++KG VPG   
Sbjct: 169 NKILVLKGAVPGFNG 183


>gi|154305466|ref|XP_001553135.1| hypothetical protein BC1G_08502 [Botryotinia fuckeliana B05.10]
 gi|150853289|gb|EDN28481.1| hypothetical protein BC1G_08502 [Botryotinia fuckeliana B05.10]
          Length = 189

 Score =  135 bits (340), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 1/116 (0%)

Query: 1   MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G +  K GMT +Y+   G R P TV+ LD  QVV H+T +KNGY AVQVGAG     
Sbjct: 74  LRTGALGIKKGMTALYDPETGVRTPCTVVQLDRVQVVAHKTREKNGYYAVQVGAGWKHPS 133

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMT 115
           NV++P  G +    V+PK+ + EFRV+ +  LL VG      +F  GQ VD     
Sbjct: 134 NVTRPELGHYEKSQVAPKRYMAEFRVKNESGLLDVGRSIGAEWFIEGQFVDARANR 189


>gi|307720136|ref|YP_003891276.1| 50S ribosomal protein L3P [Sulfurimonas autotrophica DSM 16294]
 gi|306978229|gb|ADN08264.1| LSU ribosomal protein L3P [Sulfurimonas autotrophica DSM 16294]
          Length = 191

 Score =  134 bits (339), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 89/195 (45%), Gaps = 16/195 (8%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+    +  +  PVT+L + + +V         G   V   +G+     ++K +
Sbjct: 4   IVEKIGMSRTITVPSK--PVTLLRVLDAKVCEV----NEGTAIVAYNSGKK----MNKAI 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     N+      F   V  +      G     +       V  T  T G+GFSGAMK
Sbjct: 54  EGQQKKYNLP---TEFNRFVTLEVANAEAGD-LDLAPLADASAVKTTFNTKGRGFSGAMK 109

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NFGG  A+HG     R  GS G  + PGRV K KKM G+ G  + +VKN E+VS D +
Sbjct: 110 RWNFGGGPASHG-HRFGRRTGSIGNAEWPGRVMKGKKMPGQYGNTQNSVKN-EIVSFDAE 167

Query: 186 RGLILVKGCVPGAKK 200
             +I V G V GA  
Sbjct: 168 NKIIAVLGSVSGANG 182


>gi|296272640|ref|YP_003655271.1| 50S ribosomal protein L3 [Arcobacter nitrofigilis DSM 7299]
 gi|296096814|gb|ADG92764.1| 50S ribosomal protein L3 [Arcobacter nitrofigilis DSM 7299]
          Length = 191

 Score =  134 bits (338), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 16/196 (8%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+   ++    +PVT+L + + +V        +G   V    G+      +K +
Sbjct: 4   IVEKIGMSRTVSVP--AVPVTLLKVLDTKVCEV----TDGVAIVSYSNGKK----FNKTI 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     N+S   K F      +      G     S     +++  T  T G+GFSGA+K
Sbjct: 54  EGQQKKYNLS---KEFNRFATMEVANSEAGD-LDVSGLAEAKILKTTFKTKGRGFSGAVK 109

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF G RA+HG  +  R+ GS G  + PGRV   KKM G+ G   V+VKN E+ S D +
Sbjct: 110 RWNFAGGRASHGHRMGKRT-GSIGNAEWPGRVQPGKKMPGQYGNTNVSVKN-EIFSFDAE 167

Query: 186 RGLILVKGCVPGAKKN 201
            G++ VKG V G    
Sbjct: 168 TGILAVKGSVSGPNGG 183


>gi|21450877|gb|AAK43985.2|AF370170_1 putative ribosomal protein L3 [Arabidopsis thaliana]
          Length = 134

 Score =  133 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 51/93 (54%), Positives = 69/93 (74%), Gaps = 1/93 (1%)

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KGF G MKRH F G+ A+HG S+SHRS GSTG R  PG+VFK +KMAGRMG ++ TVKN+
Sbjct: 1   KGFQGCMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGADQRTVKNV 60

Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
            V  +D  R L+ V+G VPGA+ N ++ ++D++
Sbjct: 61  WVYKIDPARNLMWVRGQVPGAEGN-FVFIKDAW 92


>gi|293553879|ref|ZP_06674485.1| ribosomal protein L3 [Enterococcus faecium E1039]
 gi|291601931|gb|EFF32177.1| ribosomal protein L3 [Enterococcus faecium E1039]
          Length = 106

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 60/108 (55%), Positives = 74/108 (68%), Gaps = 3/108 (2%)

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
            G ++DVTG T GKGF G +KRH        HG S  HR  GS G    P RVFKNK++A
Sbjct: 1   AGDIIDVTGTTKGKGFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLA 58

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           GRMGGNRVT++NLEVV VD +R +IL+KG VPGAKK S I ++ + K+
Sbjct: 59  GRMGGNRVTIQNLEVVRVDAERNVILIKGNVPGAKK-SLITIKSAVKA 105


>gi|224373649|ref|YP_002608021.1| 50S ribosomal protein L3 [Nautilia profundicola AmH]
 gi|223589482|gb|ACM93218.1| ribosomal protein L3 [Nautilia profundicola AmH]
          Length = 191

 Score =  131 bits (329), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 56/195 (28%), Positives = 85/195 (43%), Gaps = 16/195 (8%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+    I    IPVT+L +   +V   +    +    V    G+     ++K +
Sbjct: 4   IVEKIGMSRTVGIP--SIPVTLLKVVPAKVCEIK----DDKALVAYANGKK----LNKAI 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G      +    K F   V+        G   S       + V +T  + G+GF G +K
Sbjct: 54  EGMQKKYGLD---KEFNRFVELKVANTEPGD-LSIEPLKEAKKVKLTFKSKGRGFQGVVK 109

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           RH           S  HR+ GS G  + PGRV   +KM G+ G   VTV N EV+  D+ 
Sbjct: 110 RHG-FAGGPGGHGSRFHRAPGSIGNCEWPGRVMPGRKMPGQYGNKNVTV-NAEVLEYDEN 167

Query: 186 RGLILVKGCVPGAKK 200
            G++++KG VPGA  
Sbjct: 168 MGVLVIKGSVPGANG 182


>gi|313681319|ref|YP_004059057.1| LSU ribosomal protein l3p [Sulfuricurvum kujiense DSM 16994]
 gi|313154179|gb|ADR32857.1| LSU ribosomal protein L3P [Sulfuricurvum kujiense DSM 16994]
          Length = 191

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 60/195 (30%), Positives = 94/195 (48%), Gaps = 16/195 (8%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+   ++  +   VT+L +   +V        +G   V    G++     +KP+
Sbjct: 4   IVEKIGMSRTISVPSKV--VTLLKVKEIKVCEV----NDGVALVAYSQGKS----TNKPV 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     N+S +   F      +      G     +       V  +  T G+GF+G MK
Sbjct: 54  EGQQKKYNLSAEFNKFA---TLEVANTEAGD-LDMAPLANATTVKSSFNTKGRGFTGVMK 109

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF G    HG    HR+ GS G R+ PG+V K +KM+G+ G  +VTVKN EV+S D +
Sbjct: 110 RWNFAGGPGAHG-HRFHRTGGSIGNREWPGKVQKGRKMSGQYGDEQVTVKN-EVMSYDAE 167

Query: 186 RGLILVKGCVPGAKK 200
            G+++V G +PGA  
Sbjct: 168 NGVLVVVGSIPGANG 182


>gi|71027797|ref|XP_763542.1| 50S ribosomal protein L3 [Theileria parva strain Muguga]
 gi|68350495|gb|EAN31259.1| 50S ribosomal protein L3, putative [Theileria parva]
          Length = 161

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 2/124 (1%)

Query: 92  LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151
             +G +   S F       VTG+T GKGF G +KRH F     +HG S  HR  GS G  
Sbjct: 36  YVLGQLVDVSSFVGCTHAKVTGITKGKGFQGTIKRHGFKRGPMSHG-SKHHRGPGSIGAS 94

Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
             PG V   K+MAGRMGG R T + L+++ ++ +  L+ +KG V G  K S++ V    +
Sbjct: 95  TTPGCVKPGKRMAGRMGGKRCTFRKLKILGLNPETSLLYLKGLVAGP-KGSYVTVTSDVQ 153

Query: 212 SAVN 215
             + 
Sbjct: 154 PPLK 157


>gi|237751236|ref|ZP_04581716.1| 50S ribosomal protein L3 [Helicobacter bilis ATCC 43879]
 gi|229372602|gb|EEO22993.1| 50S ribosomal protein L3 [Helicobacter bilis ATCC 43879]
          Length = 197

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 67/195 (34%), Positives = 97/195 (49%), Gaps = 15/195 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           + +K+GM+ +     +   VT+L + N +V     L++NG   V    G+      +K +
Sbjct: 4   IVQKVGMSRIIATPSQA--VTLLKVLNAKVCK---LEENGKALVAYSKGKT----CNKSI 54

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     N+S   K F            VG     S  + G++V     T G+GFSGAMK
Sbjct: 55  EGNQKKYNLS---KEFNRFATLKVANTEVGD-LDMSSLSDGKVVKAGFKTKGRGFSGAMK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF G  A HG S  HR  GS G R+ PGRV   KKMAG  G   V+V++ E++S D +
Sbjct: 111 RWNFQGGPAAHG-SRFHRRLGSIGNREWPGRVQPGKKMAGHYGDEIVSVRS-EIISFDTQ 168

Query: 186 RGLILVKGCVPGAKK 200
            G++++KG V G   
Sbjct: 169 SGILVLKGSVAGYNG 183


>gi|66766345|dbj|BAD99041.1| ribosomal protein L3 [Desulfovibrio vulgaris]
          Length = 115

 Score =  129 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 1/113 (0%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           + G++ RK+GMT ++  +G  + VTV+    C V+  R  + +GY AVQ+   EAK K+V
Sbjct: 4   KLGILGRKVGMTRIFASDGSAVAVTVIQAGPCPVIQVRNGETDGYDAVQIAFEEAKEKHV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGM 114
           +KP RG F+       + L E R++   +   VG   + S F  G+ V VTG 
Sbjct: 64  TKPARGHFAKAGKGLFRNLREIRLEAPAE-FEVGQELTVSLFAAGEKVKVTGT 115


>gi|78776487|ref|YP_392802.1| 50S ribosomal protein L3 [Sulfurimonas denitrificans DSM 1251]
 gi|78497027|gb|ABB43567.1| LSU ribosomal protein L3P [Sulfurimonas denitrificans DSM 1251]
          Length = 191

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 60/195 (30%), Positives = 91/195 (46%), Gaps = 16/195 (8%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+    +  +  PVT+L + + +V      + N   A+ V     K   ++K +
Sbjct: 4   IVEKIGMSRTITVPSK--PVTLLRVLDAKVC-----EVNENSAI-VAYKSGK--KMNKAI 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     ++S     F   V  +      G     +     +++  T  T G+GF+GAMK
Sbjct: 54  EGQQKKYSIS---SEFNRFVTLEVANSEAGD-IDLTPLAEAKVIKATFTTKGRGFTGAMK 109

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF G  A HG     R  GS G  + PGRV K KKM G+ G  + +VKN E++S D +
Sbjct: 110 RWNFSGGPAEHG-HRFGRRTGSIGNAEWPGRVMKGKKMPGQYGNTQNSVKN-EIISFDAE 167

Query: 186 RGLILVKGCVPGAKK 200
             +I V G V GA  
Sbjct: 168 NKIIAVVGSVSGANG 182


>gi|212724032|ref|NP_001132440.1| hypothetical protein LOC100193892 [Zea mays]
 gi|194694386|gb|ACF81277.1| unknown [Zea mays]
          Length = 232

 Score =  129 bits (324), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 3/124 (2%)

Query: 3   SGVVARKLGMTCVYN-IEGRRIPVTVLHL--DNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
            GV+A K+GM   ++   G+ +PVTV+        V   +T   +GY AVQVG    +  
Sbjct: 45  VGVMATKVGMMTYFDPETGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVRED 104

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
            +++P  G        P + L EFR+   D   P   +     F  G L+DV+G +IGKG
Sbjct: 105 KLTRPELGHLGKAGAPPLRHLQEFRLTAVDAFEPGQPLDFADLFKEGDLIDVSGNSIGKG 164

Query: 120 FSGA 123
           F G+
Sbjct: 165 FQGS 168


>gi|124487970|gb|ABN12068.1| mitochondrial ribosomal protein L3-llike protein [Maconellicoccus
           hirsutus]
          Length = 170

 Score =  128 bits (323), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 1/114 (0%)

Query: 96  SVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
           +     +F VG  VDV G+TI +GF G MKR  F G  ATHG + +HR  G+ G  +D  
Sbjct: 1   TPLLAPHFKVGDYVDVRGLTIQRGFQGVMKRWGFHGQPATHGQTKTHRRPGTIGRGRD-K 59

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
           +V   KK+ G MG    T++ L+++ ++ K  +I V+G       NS + V D+
Sbjct: 60  KVQIGKKLPGHMGYRYRTLRGLQILRMNTKYNVIWVQGQAIAGDTNSIVYVYDT 113


>gi|293556601|ref|ZP_06675169.1| ribosomal protein L3 [Enterococcus faecium E1039]
 gi|291601277|gb|EFF31561.1| ribosomal protein L3 [Enterococcus faecium E1039]
          Length = 101

 Score =  128 bits (322), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 1/102 (0%)

Query: 1   MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
           M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY A+QVG  + +   
Sbjct: 1   MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQVKTMETDGYEAIQVGYQDMREVL 60

Query: 61  VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSY 102
            +KP +G  +  N +PK+ + EF+   +     VG   +   
Sbjct: 61  SNKPAKGHVAKANTAPKRFIREFK-NVELGEYEVGKEITVDV 101


>gi|86152355|ref|ZP_01070565.1| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85840652|gb|EAQ57904.1| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 260.94]
          Length = 170

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 62/183 (33%), Positives = 87/183 (47%), Gaps = 16/183 (8%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+         I VT+L + N +V       + G   V    G+A     +K +
Sbjct: 4   IVEKIGMSRTITNP--SIAVTLLRVVNAKVCEV----EGGKALVAYPKGKAS----NKCV 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     N+S +   F      +      G     +     +++ V+  T G+G+SG MK
Sbjct: 54  AGQQKKYNLSAEYNRFA---TLEVANTEAGD-LDETPLNEAKILKVSFNTKGRGYSGVMK 109

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           RHNF G  A+HG S  HR HGS G R+ PGRV    KMAG  G  +VTVKN EVVS D +
Sbjct: 110 RHNFAGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGHYGNTKVTVKN-EVVSYDAE 167

Query: 186 RGL 188
             +
Sbjct: 168 NKI 170


>gi|323304802|gb|EGA58561.1| Mrpl9p [Saccharomyces cerevisiae FostersB]
          Length = 119

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 47/94 (50%), Positives = 64/94 (68%), Gaps = 1/94 (1%)

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR+ F GLRA+HG SI HR  GS G  QDPGRV   +KM G MG   VT++N++V+ VD
Sbjct: 1   MKRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVLKVD 60

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           D+  +I VKG V G  KNS++ ++D+ K  ++ K
Sbjct: 61  DENNVIWVKGSVAGP-KNSFVKIQDAIKKNLSIK 93


>gi|218678066|ref|ZP_03525963.1| 50S ribosomal protein L3 [Rhizobium etli CIAT 894]
          Length = 137

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 67/123 (54%), Positives = 82/123 (66%), Gaps = 1/123 (0%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           MT VYN  G  +PVTVL ++  QVV  RT++KNGY AVQ+GAG+AKVKN SK MRG F+ 
Sbjct: 1   MTRVYNDAGEHVPVTVLRMEAVQVVATRTVEKNGYTAVQLGAGQAKVKNTSKAMRGNFAV 60

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
            NV PK KL EFRV +D +LL +G+     +F  GQLVDVTG TIGKGF+   +   F  
Sbjct: 61  ANVEPKAKLQEFRVSED-NLLEIGTELKAGHFAAGQLVDVTGTTIGKGFARRHEAPRFRR 119

Query: 132 LRA 134
              
Sbjct: 120 SPR 122


>gi|161546624|ref|NP_860909.2| 50S ribosomal protein L3 [Helicobacter hepaticus ATCC 51449]
 gi|42559601|sp|Q7VGE4|RL3_HELHP RecName: Full=50S ribosomal protein L3
          Length = 192

 Score =  126 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 91/195 (46%), Gaps = 15/195 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+    I  +   VT+L +   +V        NG   V    G++    V+K +
Sbjct: 4   IVEKIGMSR--TIGTKSEAVTLLRVLGAKVCEIYD---NGKALVAYSQGKS----VNKAI 54

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     ++S   K F            VG     +  +  + V V+  T G+GFSGAMK
Sbjct: 55  AGQQKKYSLS---KEFNRFATLKVSNKEVG-ELDVASLSEAKRVQVSFKTKGRGFSGAMK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF G    HG S  HR  GS G R+ PGRV   KKMAG  G   V+ KN +++S D +
Sbjct: 111 RWNFQGGPGAHG-SRFHRRLGSIGNREWPGRVQPGKKMAGHYGNELVSAKN-DIMSFDKQ 168

Query: 186 RGLILVKGCVPGAKK 200
             ++++KG V G   
Sbjct: 169 SAILVLKGSVAGFNG 183


>gi|157737003|ref|YP_001489686.1| 50S ribosomal protein L3 [Arcobacter butzleri RM4018]
 gi|315636195|ref|ZP_07891449.1| 50S ribosomal protein L3 [Arcobacter butzleri JV22]
 gi|157698857|gb|ABV67017.1| 50S ribosomal protein L3 [Arcobacter butzleri RM4018]
 gi|315479556|gb|EFU70235.1| 50S ribosomal protein L3 [Arcobacter butzleri JV22]
          Length = 191

 Score =  125 bits (314), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 17/205 (8%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           + +K+GM+   ++      VT+L + + +V         G   V    G+      +K +
Sbjct: 4   IVQKIGMSRTVSVP--STAVTLLRVLDTKVCEV----TEGVALVSYSNGKK----FNKAI 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     N+S +   F      + +          S     ++V  T  T G+GFSGA+K
Sbjct: 54  EGQQKKFNLSKEFNRFATITVANAEA----GDLDVSGLGEAKVVKSTFKTKGRGFSGAVK 109

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF G RA+HG  +  R+ GS G  + PGRV   KKM G+ G   V+VKN E++S D +
Sbjct: 110 RWNFAGGRASHGHRMGKRT-GSIGNCEWPGRVQPGKKMPGQYGNTNVSVKN-EIISFDAE 167

Query: 186 RGLILVKGCVPGAKKNSWILVRDSF 210
            G++++KG V GA   S   ++ + 
Sbjct: 168 TGILVLKGSVSGAN-GSLGKIKVAK 191


>gi|253795616|ref|YP_003038712.1| putative 50S ribosomal subunit protein L3 [Candidatus Hodgkinia
           cicadicola Dsem]
 gi|253739924|gb|ACT34259.1| putative 50S ribosomal subunit protein L3 [Candidatus Hodgkinia
           cicadicola Dsem]
          Length = 181

 Score =  124 bits (313), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 64/181 (35%), Positives = 94/181 (51%), Gaps = 19/181 (10%)

Query: 23  IPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFE 82
           + VT+L +  C VV   +   +G   V VG       N++       + + ++    +  
Sbjct: 7   VAVTLLDVLACVVVYVSS---DG---VVVGY------NLN-------ARLGLTSCVSVRR 47

Query: 83  FRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISH 142
                       GSV S  +       DV     GKGF+G +KRH F GLRA+HGVS++H
Sbjct: 48  AFKAHVKLPNEFGSVLSADWLARAHATDVNARCKGKGFAGVIKRHGFSGLRASHGVSLAH 107

Query: 143 RSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNS 202
           R+ G+ G RQDPGRV+K  KMAGR+GG  VT+K ++VV++D     + +KG VPG  +  
Sbjct: 108 RACGAIGSRQDPGRVWKGTKMAGRLGGGFVTLKRVKVVALDSFCQRVTLKGPVPGGSRAC 167

Query: 203 W 203
            
Sbjct: 168 V 168


>gi|406362|gb|AAD12434.1| unknown [Mycoplasma genitalium]
          Length = 154

 Score =  123 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/155 (35%), Positives = 80/155 (51%), Gaps = 7/155 (4%)

Query: 24  PVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEF 83
           P+T+++ +  QV   +T+ K+ Y A  +       K ++KP +GFFS + + P K L E 
Sbjct: 3   PITIVYCEANQVAGIKTIAKDNYNATLLSFQTVDEKQLNKPKQGFFSKLKLEPHKYLREI 62

Query: 84  RVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISH 142
           R         +G   +P   F +G+ VDVT +T G+GF+GA+KR NF      HG    H
Sbjct: 63  R---KMQGFELGKKITPQELFKIGEYVDVTSLTKGRGFTGAIKRWNFKIGPLGHGAGYPH 119

Query: 143 RSHGSTGC---RQDPGRVFKNKKMAGRMGGNRVTV 174
           R  GS           RVFK KKM+G  G  +VT+
Sbjct: 120 RFQGSVQAGRGGSSAQRVFKGKKMSGHYGHEQVTI 154


>gi|323337449|gb|EGA78698.1| Mrpl9p [Saccharomyces cerevisiae Vin13]
          Length = 119

 Score =  123 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/94 (47%), Positives = 63/94 (67%), Gaps = 1/94 (1%)

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKR+ F GLRA+HG SI HR  GS G  QDPGRV   +KM G MG   VT++N++V+ VD
Sbjct: 1   MKRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVLKVD 60

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
           D+  +I VKG V G  KNS++ ++D+    ++ +
Sbjct: 61  DENNVIWVKGSVAGP-KNSFVKIQDAIXKNLSIR 93


>gi|224437283|ref|ZP_03658255.1| 50S ribosomal protein L3 [Helicobacter cinaedi CCUG 18818]
 gi|313143738|ref|ZP_07805931.1| 50S ribosomal protein L3 [Helicobacter cinaedi CCUG 18818]
 gi|313128769|gb|EFR46386.1| 50S ribosomal protein L3 [Helicobacter cinaedi CCUG 18818]
          Length = 192

 Score =  121 bits (305), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 65/195 (33%), Positives = 89/195 (45%), Gaps = 15/195 (7%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+    I  +   VT+L +   +V       +NG   V    G A    ++K +
Sbjct: 4   IVEKIGMSR--TIGTKSEAVTLLRVLGAKVCEVY---ENGKGLVAYSQGRA----INKAV 54

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     ++S   K F            VG           + V V   T G+GFSGAMK
Sbjct: 55  AGQQKKYSLS---KEFNRFATLKLGNKEVG-ELDTGVLGEAKCVQVRFKTKGRGFSGAMK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
           R NF G  A HG S  HR  GS G R+ PGRV   KKMAG  G   V+ KN +V+S D +
Sbjct: 111 RWNFQGGPAAHG-SRFHRRLGSIGNREWPGRVQPGKKMAGHYGNELVSGKN-DVMSFDKE 168

Query: 186 RGLILVKGCVPGAKK 200
             ++++KG V G   
Sbjct: 169 SAILVLKGSVAGFNG 183


>gi|94993441|ref|YP_601539.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10750]
 gi|94546949|gb|ABF36995.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10750]
          Length = 88

 Score =  121 bits (304), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 29/83 (34%), Positives = 49/83 (59%)

Query: 1  MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
          M  G++ +K+GMT ++   G  IPVTV+      V+  +T++ +GY AVQVG  + +   
Sbjct: 1  MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60

Query: 61 VSKPMRGFFSSVNVSPKKKLFEF 83
           +KP +G  +  N +PK+ + EF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF 83


>gi|153803653|ref|ZP_01958239.1| ribosomal protein L3 [Vibrio cholerae MZO-3]
 gi|124120812|gb|EAY39555.1| ribosomal protein L3 [Vibrio cholerae MZO-3]
          Length = 93

 Score =  119 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 33/89 (37%), Positives = 54/89 (60%)

Query: 3  SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           G++ RK+GMT V+  +G  IPVTV+ ++  +V   +TL+ +GY A+QV  G  K   V+
Sbjct: 2  IGLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGSKKANRVT 61

Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDL 91
          KP  G F+   V   + L+EFR++  ++ 
Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLENGEEF 90


>gi|213416462|ref|ZP_03349606.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
          serovar Typhi str. E01-6750]
          Length = 97

 Score =  119 bits (299), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 1/97 (1%)

Query: 3  SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY AVQV  G  K   V+
Sbjct: 2  IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVT 61

Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS 99
          KP  G F+   V   + L+EFR+ + ++   VG   S
Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLAEGEE-YTVGQSIS 97


>gi|581341|emb|CAA78677.1| ribosomal protein L3 [Mycobacterium leprae]
          Length = 100

 Score =  117 bits (295), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 2/97 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R G++  KLGMT V++   R +PVTV+      V   RTL+++GY AVQ+  GE   + V
Sbjct: 4   RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTLERDGYSAVQLAYGEISPRKV 63

Query: 62  SKPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGS 96
           +KP+ G ++S  V+P++ L E R+   D      VG 
Sbjct: 64  NKPVTGQYNSAGVNPRRYLAELRLDHPDAAAEYEVGQ 100


>gi|314984921|gb|EFT29013.1| 50S ribosomal protein L3 domain protein [Propionibacterium acnes
          HL005PA1]
          Length = 89

 Score =  116 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/77 (42%), Positives = 46/77 (59%)

Query: 3  SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           GV+  KLGMT +++   R +PVTV+    C V   RT + +GY AVQ+G G  K KNV+
Sbjct: 13 KGVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKNVT 72

Query: 63 KPMRGFFSSVNVSPKKK 79
          KP  G F    V+P++ 
Sbjct: 73 KPEAGHFEKAGVTPRRH 89


>gi|41615218|ref|NP_963716.1| 50S ribosomal protein L3P [Nanoarchaeum equitans Kin4-M]
 gi|42559579|sp|P60458|RL3_NANEQ RecName: Full=50S ribosomal protein L3P
 gi|40068942|gb|AAR39277.1| NEQ433 [Nanoarchaeum equitans Kin4-M]
          Length = 321

 Score =  116 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 69/267 (25%), Positives = 106/267 (39%), Gaps = 60/267 (22%)

Query: 7   ARKLGMTC-VYNIEGRRI--PVTVLHLDNCQVVVHR-TLDKNG---------------YM 47
           A K+GMT  + NI G R+  PVTVL      V+  +    +NG               Y+
Sbjct: 45  AYKVGMTHTILNINGERVFTPVTVLEAPELLVIGAKAYKKENGALKEISSLYFNDLPQYV 104

Query: 48  AVQV------GAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP-------- 93
             ++         E K + +SK        + VS +    + +   +   +P        
Sbjct: 105 FRKIPKLKNYNFEEKKEQFLSKADNADEVKIIVSTQPWKIKLKKTPEIFDIPIGGSDVNK 164

Query: 94  --------VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRS 144
                   +G   S    F  GQ VDV  +T GKGF G +KR  F   R  H      R 
Sbjct: 165 KLEYALSLLGKELSINDVFKEGQYVDVIAVTKGKGFQGVIKR--FHVHRRQHKSEKGVRK 222

Query: 145 HGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL--------------IL 190
            G+ G R  PGR+F    M G+MG +R T  N  ++ + +   +              IL
Sbjct: 223 VGAIGSRG-PGRIFPTVPMPGQMGYHRRTEYNKLIIKIGEPLNVEGGWVRYGQVIGPTIL 281

Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNCK 217
           +KG VPG +K   I++R++ +     +
Sbjct: 282 LKGSVPGPRKR-LIILREAIRPPRKQE 307


>gi|227871804|ref|ZP_03990207.1| possible ribosomal protein L3 [Oribacterium sinus F0268]
 gi|227842340|gb|EEJ52567.1| possible ribosomal protein L3 [Oribacterium sinus F0268]
          Length = 81

 Score =  116 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/81 (43%), Positives = 50/81 (61%)

Query: 1  MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
          M+  ++A K+GMT +++  G  IPVTVL    C V   +TL+ +GY AVQVG  E + K 
Sbjct: 1  MKKAILATKVGMTQIWDENGVLIPVTVLQAGPCVVTQVKTLENDGYKAVQVGFLEKREKL 60

Query: 61 VSKPMRGFFSSVNVSPKKKLF 81
          V+KP++G F    VS K+ L 
Sbjct: 61 VNKPLKGQFDKAGVSYKRFLR 81


>gi|32262929|gb|AAP77975.1| ribosomal protein L3 [Helicobacter hepaticus ATCC 51449]
          Length = 183

 Score =  116 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 61/189 (32%), Positives = 87/189 (46%), Gaps = 15/189 (7%)

Query: 12  MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
           M+    I  +   VT+L +   +V        NG   V    G++    V+K + G    
Sbjct: 1   MSR--TIGTKSEAVTLLRVLGAKVCEIYD---NGKALVAYSQGKS----VNKAIAGQQKK 51

Query: 72  VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
            ++S   K F            VG     +  +  + V V+  T G+GFSGAMKR NF G
Sbjct: 52  YSLS---KEFNRFATLKVSNKEVG-ELDVASLSEAKRVQVSFKTKGRGFSGAMKRWNFQG 107

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
               HG S  HR  GS G R+ PGRV   KKMAG  G   V+ KN +++S D +  ++++
Sbjct: 108 GPGAHG-SRFHRRLGSIGNREWPGRVQPGKKMAGHYGNELVSAKN-DIMSFDKQSAILVL 165

Query: 192 KGCVPGAKK 200
           KG V G   
Sbjct: 166 KGSVAGFNG 174


>gi|70951495|ref|XP_744983.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56525155|emb|CAH78805.1| hypothetical protein PC001313.02.0 [Plasmodium chabaudi chabaudi]
          Length = 185

 Score =  114 bits (287), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 4/139 (2%)

Query: 79  KLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGV 138
           K+ EF+   D   LPV   FS  +F+ GQ + ++     KGF GAM++ NF G   +HG 
Sbjct: 1   KIREFKCTSDC-FLPVQHKFSARHFSPGQNLFISSSIKNKGFCGAMQKWNFSGKNQSHGT 59

Query: 139 -SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEVVSVDDKRGLILVKGCVP 196
            S +HRS GS    +    VF+NKKM   +G    V   N ++  ++  + L+ +KG + 
Sbjct: 60  ESKAHRSLGSVSMGKTINIVFRNKKMNTHIGEKSLVKCSNNKLFRINSLKNLLFIKGTI- 118

Query: 197 GAKKNSWILVRDSFKSAVN 215
           G  KN  I + D+   A N
Sbjct: 119 GGYKNKIIKISDAKGRAFN 137


>gi|261884192|ref|ZP_06008231.1| 50S ribosomal protein L3 [Campylobacter fetus subsp. venerealis
           str. Azul-94]
          Length = 153

 Score =  114 bits (285), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/164 (28%), Positives = 69/164 (42%), Gaps = 14/164 (8%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+    +     PVT+L L   +V     L + G   V     +A     +K +
Sbjct: 4   IVEKIGMSR--TVSAPSTPVTLLRLVPAKVCE---LGEGGKAIVAYAHTKAD----NKAI 54

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
           +G      +S +   F             G     +     +++ V+  T G+GF G +K
Sbjct: 55  KGQQKKYGLSSEFNSFA---TLSVANSEAGD-LDVNPLNEAKVLKVSFNTKGRGFQGVIK 110

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
           RH F    A+HG S  HR  GS G  + PGRV   +KMAG  G 
Sbjct: 111 RHGFLCGPASHG-SRFHRRPGSIGNCEWPGRVQPGRKMAGHYGN 153


>gi|313631759|gb|EFR98952.1| ribosomal protein L3 [Listeria seeligeri FSL N1-067]
          Length = 93

 Score =  112 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/93 (43%), Positives = 55/93 (59%), Gaps = 2/93 (2%)

Query: 96  SVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
           +      F  G ++D TG++ GKGF G +KRH        HG S  HR  GS G    P 
Sbjct: 1   AEVKVDVFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PN 58

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188
           RVFKNK + GRMGG ++T++NLE+V VD ++ +
Sbjct: 59  RVFKNKLLPGRMGGEQITIQNLEIVKVDVEKNV 91


>gi|288931510|ref|YP_003435570.1| ribosomal protein L3 [Ferroglobus placidus DSM 10642]
 gi|288893758|gb|ADC65295.1| ribosomal protein L3 [Ferroglobus placidus DSM 10642]
          Length = 329

 Score =  112 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 64/273 (23%), Positives = 102/273 (37%), Gaps = 65/273 (23%)

Query: 4   GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHR-------------- 39
           G    K GMT V  I+ R+          +PVTVL     +V+  R              
Sbjct: 39  GFAGYKAGMTHVIMIDDRKNSPTYGEEIMVPVTVLETPPMKVMGIRVYRKTVYGLQIAGE 98

Query: 40  --TLDKNGYMAVQVGAGEAK----------------VKNVSKPMR--GFFSSV-NVSPKK 78
             T + + Y++ ++   + K                V   ++P    G    V +V  +K
Sbjct: 99  VWTDEVDSYLSRRLQIPKKKGDVDKLKEIDDIAEVRVITYTQPYLITGVPKKVPDVMEQK 158

Query: 79  KLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHG 137
              +     +  +  +G        F  G  +DV  +T GKGF G +KR     L A H 
Sbjct: 159 VGGDVEAALNYAIEKLGKEVRVNEVFKEGAFIDVLSITKGKGFQGPVKRWGVITLDAKHA 218

Query: 138 VSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS-------VDDKRGLI- 189
            S  HR  G+ G    P RV      AG+MG ++ T  N  ++        ++ + G + 
Sbjct: 219 RSSKHRRVGTLGPW-HPHRVRWTVPQAGQMGFHQRTEYNKRILKIGTNGEDINPEGGFLH 277

Query: 190 ---------LVKGCVPGAKKNSWILVRDSFKSA 213
                    LV G VPG+ K   + +RD+ +  
Sbjct: 278 YGLVRSDYVLVSGSVPGSVKR-LVRMRDAIRPP 309


>gi|125580740|gb|EAZ21671.1| hypothetical protein OsJ_05302 [Oryza sativa Japonica Group]
          Length = 116

 Score =  112 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 49/102 (48%), Positives = 66/102 (64%), Gaps = 1/102 (0%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F  G LVD++G +IGKGF G +KRHNF     THG S SHR+ GS G    PGRV+K K
Sbjct: 1   MFKEGDLVDISGKSIGKGFQGGIKRHNFKRGLMTHG-SKSHRALGSIGAGTTPGRVYKGK 59

Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSW 203
           KM GRMGG +  ++ L++V +D+   ++++KG VPG   N  
Sbjct: 60  KMPGRMGGTKTKIRKLKIVKIDNDLKVVMIKGAVPGKPGNLL 101


>gi|198462074|ref|XP_001352331.2| GA20958 [Drosophila pseudoobscura pseudoobscura]
 gi|198139691|gb|EAL29374.2| GA20958 [Drosophila pseudoobscura pseudoobscura]
          Length = 233

 Score =  111 bits (278), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 2/102 (1%)

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
             GF G +KRH + G+ A+HGV+ +HR  G+ G   + GRV+   KM G MG     +K 
Sbjct: 96  DHGFQGVVKRHGYKGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKMPGHMGNRWRVLKG 155

Query: 177 LEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217
           L +   + K  ++ V+G  VPG      + + D+       K
Sbjct: 156 LRIWRTNAKYNVMWVQGSSVPGP-TGGLVYIYDTILPLRKLK 196


>gi|195175671|ref|XP_002028552.1| GL21036 [Drosophila persimilis]
 gi|194104882|gb|EDW26925.1| GL21036 [Drosophila persimilis]
          Length = 712

 Score =  111 bits (278), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 2/102 (1%)

Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
             GF G +KRH + G+ A+HGV+ +HR  G+ G   + GRV+   KM G MG     +K 
Sbjct: 505 DHGFQGVVKRHGYMGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKMPGHMGNRWRVLKG 564

Query: 177 LEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217
           L +     K  ++ V+G  VPG      + + D+       K
Sbjct: 565 LRIWRTKAKYNVMWVQGSSVPGP-TGGLVYIYDTILPLRKLK 605


>gi|169603664|ref|XP_001795253.1| hypothetical protein SNOG_04840 [Phaeosphaeria nodorum SN15]
 gi|160706431|gb|EAT87231.2| hypothetical protein SNOG_04840 [Phaeosphaeria nodorum SN15]
          Length = 190

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/92 (45%), Positives = 63/92 (68%), Gaps = 1/92 (1%)

Query: 1   MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
           +R+G++A K GMT +Y+   G+R   TVL LD   VV H+T +KNGY AVQ+GAG+ + +
Sbjct: 80  LRTGLLALKRGMTAIYDPTTGKRAACTVLQLDRNVVVAHKTREKNGYWAVQIGAGQKEAR 139

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL 91
           NV+KPM G F+    +PK+ + EF+V+  + L
Sbjct: 140 NVTKPMLGHFAKAETAPKRWVVEFKVKGQEGL 171


>gi|11499509|ref|NP_070750.1| 50S ribosomal protein L3P [Archaeoglobus fulgidus DSM 4304]
 gi|3914742|sp|O28354|RL3_ARCFU RecName: Full=50S ribosomal protein L3P
 gi|2648621|gb|AAB89331.1| LSU ribosomal protein L3P (rpl3P) [Archaeoglobus fulgidus DSM 4304]
          Length = 331

 Score =  110 bits (276), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 67/275 (24%), Positives = 98/275 (35%), Gaps = 67/275 (24%)

Query: 4   GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGY------- 46
           G    K GMT V  I+ R+          +PVTV+     +V   R   K  Y       
Sbjct: 39  GFAGYKAGMTHVVMIDDRKNSPTYGEEVVVPVTVIETPPMKVAAVRVYKKTQYGMQIAAE 98

Query: 47  ---------------------------MAVQVGAGEAKVKNVSKPMR--GFFSSV-NVSP 76
                                       AV+ GA E +V   ++P    G    V +V  
Sbjct: 99  VWSNNLDDFLDRRLNLPKKEPDVEKLKAAVENGASEVRVVTYTQPYLITGVPKKVPDVME 158

Query: 77  KKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRAT 135
            +         D  +  +G   S    F  G ++DV  +T GKGF G +KR     L A 
Sbjct: 159 HRIGGNVEEALDYAISKLGKEISVSEVFDEGAIIDVIAVTKGKGFQGPVKRWGVITLDAK 218

Query: 136 HGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--DDKR------- 186
           H  S  HR  G+ G   +P  V      AG+MG ++ T  N  ++ +  + +        
Sbjct: 219 HARSSKHRRVGNLGPW-NPHHVRWTVPQAGQMGFHQRTEYNKRLIKIGENGEEITPKGGF 277

Query: 187 --------GLILVKGCVPGAKKNSWILVRDSFKSA 213
                     +LV G VPG  K   I +RD+ +  
Sbjct: 278 LHYGVIRTQYVLVTGSVPGPVKR-LIRMRDAIRPP 311


>gi|330899737|gb|EGH31156.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. japonica str.
          M301072PT]
          Length = 77

 Score =  109 bits (273), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 31/77 (40%), Positives = 44/77 (57%)

Query: 1  MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
          M  GVV RK GMT ++  EG  IPVTV+ ++  +V   +T + +GY AVQV  GE +   
Sbjct: 1  MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60

Query: 61 VSKPMRGFFSSVNVSPK 77
          V+    G F+  NV+  
Sbjct: 61 VTAAQAGHFAKANVAAG 77


>gi|284162460|ref|YP_003401083.1| ribosomal protein L3 [Archaeoglobus profundus DSM 5631]
 gi|284012457|gb|ADB58410.1| ribosomal protein L3 [Archaeoglobus profundus DSM 5631]
          Length = 332

 Score =  109 bits (272), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 63/276 (22%), Positives = 93/276 (33%), Gaps = 69/276 (25%)

Query: 4   GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
           G    K GMT V  I+ R+          +PVTVL     +V   R      Y  +Q+  
Sbjct: 40  GFAGYKAGMTHVIMIDDRKNSPTYGEEIVVPVTVLECPPMKVAGIRVYKNTMY-GLQIAK 98

Query: 54  G----------------------------------EAKVKNVSKPMR--GFFSSV--NVS 75
                                              E ++   ++P    G  S     + 
Sbjct: 99  EVWTTELDEHLSRRLPLPKKINTDVESLKNVENIAEVRLITYTQPYLITGVPSKTPDVME 158

Query: 76  PKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRA 134
            K    +     D  +  +G        F  G  +DV  +T GKGF G +KR     L A
Sbjct: 159 YKVGGSDINAVLDYAISKLGKEIRVSEVFQEGAFIDVIAITKGKGFQGPVKRWGVITLDA 218

Query: 135 THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD---------- 184
            H  S  HR  G+ G    P RV      AG+MG ++ T  N  ++ + +          
Sbjct: 219 KHARSSKHRRVGTLGPW-TPHRVRWTVPQAGQMGFHQRTEYNKRIIKIGENGEEITPEGG 277

Query: 185 -------KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
                  +   +LV G VPG  K   I +RD+ +  
Sbjct: 278 FVHYGVIRSDYVLVSGSVPGPVKR-LIRMRDAIRPP 312


>gi|288560108|ref|YP_003423594.1| ribosomal protein L3P Rpl3p [Methanobrevibacter ruminantium M1]
 gi|288542818|gb|ADC46702.1| ribosomal protein L3P Rpl3p [Methanobrevibacter ruminantium M1]
          Length = 336

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 61/291 (20%), Positives = 94/291 (32%), Gaps = 77/291 (26%)

Query: 4   GVVARKLGMTC--VYNIEGRR--------IPVTVLHLDNCQVVVHRTLDK--NGYMAV-- 49
           G+   K GMT   V + +            PVTVL +    ++  R+ +K  +G  A+  
Sbjct: 40  GLAGYKAGMTHAMVVDNDKNSPSHGMEVFTPVTVLEVPPLVILGIRSYEKTAHGLKAITE 99

Query: 50  -----------------------------QVGAGEAKVKNV---SKPMRGFFSSVNVSPK 77
                                        Q    + +   V   + P           P+
Sbjct: 100 VIADNLDEELSRKITLPKDYDQSEAIAKIQDALEKTEEVRVLVHTNPKMASVPKKK--PE 157

Query: 78  KKLFEFRVQKDDDLLP-----VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
                      ++ L      +G        F+ GQ VD    T GKG  G +KR N   
Sbjct: 158 IFECALGGSSAEEKLNYALGILGQEIRASDIFSEGQYVDAIATTKGKGVQGVVKRWNIRI 217

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD-------- 183
                  S   R  GS G    P R       AG+MG ++ T  N +V+ +         
Sbjct: 218 QYGKAMRSGKGRHVGSIGPWS-PERTMWTVAQAGQMGYHKRTEFNKKVIKIGDVSEVDAV 276

Query: 184 -----------DKRGLILVKGCVPGAKKNSWILVRDSF--KSAVNCKGKVS 221
                       K   +LVKG VPG  K   +++R +   K A +   +V+
Sbjct: 277 NPAGGFIRYGLVKNDYVLVKGSVPGPTKR-LVILRQAIRPKKADDAAPQVN 326


>gi|15678033|ref|NP_275147.1| 50S ribosomal protein L3P [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|3122720|sp|O26110|RL3_METTH RecName: Full=50S ribosomal protein L3P
 gi|2621048|gb|AAB84521.1| ribosomal protein L3 (E.coli ) [Methanothermobacter
           thermautotrophicus str. Delta H]
          Length = 337

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 55/283 (19%), Positives = 95/283 (33%), Gaps = 75/283 (26%)

Query: 4   GVV---ARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGYMAVQ 50
           G++     K GMT V  ++ ++           PVT+L +    V+  RT +K       
Sbjct: 37  GLLALAGYKAGMTHVMMVDNQKNSPTEGMEVSTPVTILEVPPLTVMAVRTYEKTSRGLKT 96

Query: 51  VGAGEAKV------KNVSKPMRGFFSSVNVSPKKKLFEFRVQ----------------KD 88
           +G   A        + ++ P   +     +   +   E+                   K 
Sbjct: 97  LGEVLATETKDDLRRKLTPPADDYDQEAAIEKIRSNMEYVADVRVIVHTNPRLASVPKKK 156

Query: 89  DDLLPVG-------------------SVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129
            ++   G                    V +   F+ G  VD   +T GKGF G +KR   
Sbjct: 157 PEVFECGLGGKTPEEKFEYALEILGKDVRASEIFSEGAFVDAIAVTKGKGFQGPVKRWGI 216

Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD------ 183
                    S   R  GS G    P R       AG+MG +R T  N +++ +       
Sbjct: 217 RIQYGKAARSSKGRHIGSLGPW-TPSRTMWTVPQAGQMGYHRRTEYNKQILKIGDASEAD 275

Query: 184 -------------DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
                         +   +++KG VPG  K   +++R + ++A
Sbjct: 276 LVNPDGGFVRYGLVRNDYVMIKGSVPGPTKR-LVVLRKAIRAA 317


>gi|327400872|ref|YP_004341711.1| 50S ribosomal protein L3 [Archaeoglobus veneficus SNP6]
 gi|327316380|gb|AEA46996.1| ribosomal protein L3 [Archaeoglobus veneficus SNP6]
          Length = 329

 Score =  105 bits (263), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 61/274 (22%), Positives = 98/274 (35%), Gaps = 67/274 (24%)

Query: 4   GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGYMAVQVG- 52
           G    K+GMT V  ++ R+          +PVTV+     +V   R   K  Y  +Q+  
Sbjct: 39  GFAGYKVGMTHVVMVDDRKNSLTYGEEIVVPVTVIETPPMKVAGIRVYRKTPY-GMQIAG 97

Query: 53  --------------------------------AGEAKVKNVSKPMR--GFFSSV-NVSPK 77
                                           A E +V   ++P    G    V +V   
Sbjct: 98  EVWSSDLDNFLGRRLQLPKKSPDVEKLKEIDDAAEVRVITYTQPYLITGIPKKVPDVMEH 157

Query: 78  KKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATH 136
           K   +     D  +  +G        ++ G ++DV  +T GKGF G +KR     L A H
Sbjct: 158 KVGGDVSSALDYAIEKLGKEIRVSEVYSEGAIIDVLSITKGKGFQGPVKRWGVITLDAKH 217

Query: 137 GVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK----------- 185
             S  HR  G  G   +P  +      AG+MG ++ T  N  ++ + +            
Sbjct: 218 ARSSKHRRVGCLGPW-NPHHIRWTVPQAGQMGFHQRTEFNKRIIKIGEDGSEVTPNGGFP 276

Query: 186 ------RGLILVKGCVPGAKKNSWILVRDSFKSA 213
                    +L+ G VPG+ K   I +RD+ +  
Sbjct: 277 HYGVVRSDYVLISGSVPGSVKR-LIRMRDAIRPP 309


>gi|169929958|gb|ACB05656.1| 50S ribosomal protein L3 [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 94

 Score =  105 bits (262), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 42/87 (48%), Positives = 51/87 (58%), Gaps = 1/87 (1%)

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           + GKG  G +KRH F G  A HG S   R  GS G    PGRVFK  KM GRMG  + TV
Sbjct: 1   SKGKGTQGVVKRHGFAGGPAGHG-SRFQRHPGSIGSNTTPGRVFKGLKMGGRMGSEQTTV 59

Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKN 201
           +NL+VV +D    L+ V G VPG ++ 
Sbjct: 60  RNLKVVKIDADANLVFVSGPVPGRERG 86


>gi|304314253|ref|YP_003849400.1| 50S ribosomal protein L3P [Methanothermobacter marburgensis str.
           Marburg]
 gi|302587712|gb|ADL58087.1| 50S ribosomal protein L3P [Methanothermobacter marburgensis str.
           Marburg]
          Length = 337

 Score =  105 bits (262), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 57/283 (20%), Positives = 96/283 (33%), Gaps = 75/283 (26%)

Query: 4   GVV---ARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGYMAVQ 50
           G++     K GMT V  ++ ++           PVT+L +    V+  R  +K       
Sbjct: 37  GLLALAGYKAGMTHVMMVDNQKNSPTEGMEVSTPVTILEVPPLTVMAVRAYEKTSRGLKT 96

Query: 51  VG---AGEAKV---KNVSKPMRGFFSSVNVSPKKKLFEFRVQ----------------KD 88
           +G   A E K    + ++ P   +     +   +   E+                   K 
Sbjct: 97  LGEVLATETKEDLRRKLTPPAEDYDQEAAIERIRSNMEYVADVRVIVHTNPRLASVPKKK 156

Query: 89  DDLLPVG-------------------SVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129
            ++   G                    V +   F+ G  VD   +T GKGF G +KR   
Sbjct: 157 PEVFECGLGGKTPEEKFEYALGILGKDVRASEIFSEGAFVDAIAVTKGKGFQGPVKRWGI 216

Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD------ 183
                    S   R  GS G    P R       AG+MG +R T  N +++ +       
Sbjct: 217 RIQYGKAARSSKGRHIGSLGPW-TPSRTMWTVPQAGQMGYHRRTEYNKQILKIGDASEAD 275

Query: 184 -------------DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
                         +   ++VKG VPG  K   +++R + ++A
Sbjct: 276 QVNPSGGFVRYGLVRNDYVMVKGSVPGPTKR-LVVLRKAIRAA 317


>gi|42858|emb|CAA23634.1| ribosomal protein L3 [Escherichia coli]
          Length = 80

 Score =  105 bits (262), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 28/79 (35%), Positives = 45/79 (56%)

Query: 3  SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
           G+V +K+GMT ++  +G  IPVTV+ ++  +V   + L  +GY A+QV  G  K   V+
Sbjct: 2  IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVT 61

Query: 63 KPMRGFFSSVNVSPKKKLF 81
          KP  G F+   V   + L+
Sbjct: 62 KPEAGHFAKAGVEAGRGLW 80


>gi|124484910|ref|YP_001029526.1| 50S ribosomal protein L3P [Methanocorpusculum labreanum Z]
 gi|212288407|sp|A2SPK3|RL3_METLZ RecName: Full=50S ribosomal protein L3P
 gi|124362451|gb|ABN06259.1| LSU ribosomal protein L3P [Methanocorpusculum labreanum Z]
          Length = 333

 Score =  105 bits (262), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 57/278 (20%), Positives = 95/278 (34%), Gaps = 69/278 (24%)

Query: 1   MRSGVVARKLGMTCVYNIEG----------RRIPVTVLHLDNCQVVVHRTLDKNGY---- 46
           M  G    K GMT V  I+             +PVTV+ +    V   R   K+ Y    
Sbjct: 37  MLQGFAGYKAGMTHVIMIDDHKKSPTEGKEVMVPVTVIEIPAMTVAAIRVYVKDTYGKHP 96

Query: 47  ---------MAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP---- 93
                     A+     +AK  N +K      +++    +  +  +    +   +P    
Sbjct: 97  LTEVWAENLEALSGRITKAKTNNAAKATEKINAAIGDVVEVMVLMYTKPTELTGVPKKVP 156

Query: 94  ----------------------VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
                                 +G+     S  + GQ  D+TG+T GKGF GA+KR    
Sbjct: 157 DLMEIRVAGGSAQERFDYALSILGTDVDMKSLLSEGQFADITGITKGKGFQGAVKRFGIT 216

Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD------- 183
             +  H  +   R  G+ G    P  V     M G+MG  + T  N  ++ +        
Sbjct: 217 LRKRKHARTKKERHIGTLGPW-TPHHVRWQVPMPGQMGFQQRTEFNKRIIKIGENADEIN 275

Query: 184 ----------DKRGLILVKGCVPGAKKNSWILVRDSFK 211
                      +   +L+KG +PG  K   + +R + +
Sbjct: 276 PAGGFLHYGLVRNNYVLIKGSIPGPAKR-LVRIRSATR 312


>gi|260891594|ref|ZP_05902857.1| hypothetical protein GCWU000323_02809 [Leptotrichia hofstadii
           F0254]
 gi|260858702|gb|EEX73202.1| ribosomal protein L3 [Leptotrichia hofstadii F0254]
          Length = 90

 Score =  102 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 2/90 (2%)

Query: 124 MKRHNFGGLRATHGVSISHRSHGST-GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           MKRHNFGG RA+HGVS +HR  GS  G       V K KKMAGR+G  +VTV+NL+V+  
Sbjct: 1   MKRHNFGGNRASHGVSRNHRLGGSNAGGAASNSNVPKGKKMAGRLGAEKVTVQNLQVIKY 60

Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           D +  L+LVKG VPG  KN +++++ S K 
Sbjct: 61  DVENSLLLVKGAVPGP-KNGYLVIKKSVKK 89


>gi|301500983|ref|YP_003795448.1| ribosomal protein L3 [Alveolata sp. CCMP3155]
 gi|300069529|gb|ADJ66636.1| ribosomal protein L3 [Chromerida sp. RM11]
          Length = 209

 Score =  102 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 1/93 (1%)

Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
           V + G+  G GF+G + R+ F     T G S  HR+ GS G    P RV+  KKM GR  
Sbjct: 111 VCIRGVGKGHGFAGVVSRYGFSRGPMTRG-SKHHRAPGSAGAGTFPSRVYPRKKMPGRWK 169

Query: 169 GNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKN 201
            +R     +  + +D +  L+ ++G VPG   N
Sbjct: 170 TSRRKYNRVRPLKLDVRHSLLWLQGSVPGKTGN 202


>gi|218672012|ref|ZP_03521681.1| 50S ribosomal protein L3 [Rhizobium etli GR56]
          Length = 74

 Score =  102 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 54/75 (72%), Positives = 62/75 (82%), Gaps = 1/75 (1%)

Query: 141 SHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKK 200
           SHRSHGSTG RQDPG+VFKNKKMAG MG  RVT +NLEVVS D+ RGLIL+KG VPG+ K
Sbjct: 1   SHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVVSTDEDRGLILIKGAVPGS-K 59

Query: 201 NSWILVRDSFKSAVN 215
            +WI+VRD+ KSA  
Sbjct: 60  GAWIIVRDAVKSAAK 74


>gi|20093853|ref|NP_613700.1| 50S ribosomal protein L3P [Methanopyrus kandleri AV19]
 gi|42559662|sp|Q8TY90|RL3_METKA RecName: Full=50S ribosomal protein L3P
 gi|19886782|gb|AAM01630.1| Ribosomal protein L3 [Methanopyrus kandleri AV19]
          Length = 361

 Score =  101 bits (253), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 59/284 (20%), Positives = 86/284 (30%), Gaps = 75/284 (26%)

Query: 4   GVVARKLGMTCVYNIE--------GR--RIPVTVLHLDNCQVVVHRT--LDKNGYMAV-- 49
           G    K GMT    I+        G    +PVT+L      V   R      +GY  V  
Sbjct: 45  GFAGYKAGMTHAIMIDDWPNSPTEGEEISVPVTILDAPPMYVAAIRAYAPTPDGYRCVTE 104

Query: 50  -------------------------------QVGAGEAKVKNVSKPMRGFFSSVNVS--- 75
                                           V  G  +   V   +        V    
Sbjct: 105 AWAEIPEELEMDRVFTVPKDGEAGDLDKIEELVDEGIVEEIRV--IVATQPKKAGVPKKK 162

Query: 76  PKKKLFEFRVQKDDDLLPVGSVF------SPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129
           P    +    +   +              +   F  G++VDV+ +T GKGF G +KR   
Sbjct: 163 PDVMEYRIGGKDVRERFEYAVEILSEEIRAKDVFDEGEIVDVSAITKGKGFQGVVKRWGV 222

Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--DDKR- 186
                        R  GS G    P RV     MAG++G ++ T  N  ++ +  D +  
Sbjct: 223 TIQDRKTQRKQKGRHIGSIGPI-TPSRVRWTVPMAGQVGYHQRTEHNKRILKIGEDGEEV 281

Query: 187 --------------GLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
                           I++ G VPG KK   I VR + +   N 
Sbjct: 282 TPRGGFVNYGVVRGDYIMIHGTVPGPKKR-LIRVRPAVRPPKNA 324


>gi|161616466|ref|YP_001590431.1| hypothetical protein SPAB_04281 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161365830|gb|ABX69598.1| hypothetical protein SPAB_04281 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 72

 Score =  101 bits (252), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 40/73 (54%), Positives = 53/73 (72%), Gaps = 1/73 (1%)

Query: 140 ISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAK 199
           +SHR  GS G  Q PG+VFK KKMAG+MG  RVTV++L+VV VD +R L+LVKG VPGA 
Sbjct: 1   MSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAERNLLLVKGGVPGA- 59

Query: 200 KNSWILVRDSFKS 212
               ++V+ + K+
Sbjct: 60  TGCDLIVKPAVKA 72


>gi|84489708|ref|YP_447940.1| 50S ribosomal protein L3P [Methanosphaera stadtmanae DSM 3091]
 gi|109893523|sp|Q2NFV6|RL3_METST RecName: Full=50S ribosomal protein L3P
 gi|84373027|gb|ABC57297.1| 50S ribosomal protein L3P [Methanosphaera stadtmanae DSM 3091]
          Length = 337

 Score =  101 bits (252), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 57/284 (20%), Positives = 89/284 (31%), Gaps = 77/284 (27%)

Query: 4   GVV---ARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGYMAVQ 50
           G++     K+GMT V  ++ R+          +PVT+L      V+  R   K  Y    
Sbjct: 37  GLLAFAGYKVGMTHVTALDSRKGSPTENMELSVPVTILEAPPLVVLGIRAYTKTTYGLKT 96

Query: 51  VG-------------------------------------AGEAKVKNVSKPMRGFFSSVN 73
           +                                        E +V   +KP         
Sbjct: 97  LTDVIANDNLDDELSRKISVPKFDDIEAKIEELRNKIDDIDEIRVLIHTKPKLTSVPKKK 156

Query: 74  ---VSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129
              +           + +  +  +G   +P   F  G+  D    T GKG  G +KR   
Sbjct: 157 PEVLEFGLGGKSVEDKLEYAISILGKEITPQDVFQEGEYTDAIATTKGKGVQGPVKRFGV 216

Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK---- 185
                    S   R  GS G    P R      M G+MG ++ T  N +++ + D+    
Sbjct: 217 RIQYGKAARSGIERHVGSIGPW-TPNRTMWTVAMQGQMGYHKRTEYNKKLLKIGDESEVD 275

Query: 186 ---------------RGLILVKGCVPGAKKNSWIL---VRDSFK 211
                             ILVKG +PG  K   +L   VR++ K
Sbjct: 276 LINPDGGFVKYGFVKNNYILVKGSLPGPSKRLVVLRKGVRNASK 319


>gi|242052021|ref|XP_002455156.1| hypothetical protein SORBIDRAFT_03g005220 [Sorghum bicolor]
 gi|241927131|gb|EES00276.1| hypothetical protein SORBIDRAFT_03g005220 [Sorghum bicolor]
          Length = 144

 Score =  100 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 27/69 (39%), Positives = 46/69 (66%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
           R+GV+  K GM+ +++  G ++P+TVL +D+  V   +T +K G+ A+Q+GAG+ K K++
Sbjct: 71  RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVTQVKTAEKEGFFALQLGAGQKKEKHL 130

Query: 62  SKPMRGFFS 70
            KP  G F 
Sbjct: 131 PKPEVGHFR 139


>gi|182418827|ref|ZP_02950092.1| 50S ribosomal protein L3 [Clostridium butyricum 5521]
 gi|182377324|gb|EDT74885.1| 50S ribosomal protein L3 [Clostridium butyricum 5521]
          Length = 77

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 2/79 (2%)

Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKG 193
            THG S  HR+ GS G   DP R FKNK+M G MG    TV NL+VV V  ++ LIL+KG
Sbjct: 1   MTHG-SKFHRAPGSMGASSDPSRTFKNKRMPGHMGSVNTTVLNLQVVKVIAEKNLILIKG 59

Query: 194 CVPGAKKNSWILVRDSFKS 212
            +PG  K + + ++++ ++
Sbjct: 60  GIPGPNKGTVV-IKNTVRA 77


>gi|86154135|ref|ZP_01072334.1| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|85842375|gb|EAQ59591.1| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni HB93-13]
          Length = 144

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 15/156 (9%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+         I VT+L + N +V       + G   V    G+A     +K +
Sbjct: 4   IVEKIGMSRTITNP--SIAVTLLRVVNAKVCEV----EGGKALVAYPKGKAS----NKCV 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     N+S +   F      +      G     +     +++ V+  T G+G+SG MK
Sbjct: 54  AGQQKKYNLSAEYNRFA---TLEVANTEAGD-LDETPLNEAKILKVSFNTKGRGYSGVMK 109

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
           RHNF G  A+HG S  HR HGS G R+ PGRV    
Sbjct: 110 RHNFAGGPASHG-SRFHRRHGSIGNREWPGRVQPGM 144


>gi|307354323|ref|YP_003895374.1| 50S ribosomal protein L3 [Methanoplanus petrolearius DSM 11571]
 gi|307157556|gb|ADN36936.1| ribosomal protein L3 [Methanoplanus petrolearius DSM 11571]
          Length = 337

 Score = 98.7 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 57/279 (20%), Positives = 93/279 (33%), Gaps = 72/279 (25%)

Query: 7   ARKLGMTCVYNIE--------GR--RIPVTVLHLDNCQVVVHRTLDKNGY---------- 46
             K+GMT V  I+        G+   +PVTV+ +   +V+  R    + Y          
Sbjct: 44  GYKVGMTHVIMIDDHKNSPSEGKEISVPVTVIEIPPMKVIAIRAYTNDTYGRKAFAEVWS 103

Query: 47  --------MAVQVGAGEAKVKNVSKPMRGFFSS----------------VNVSPK-KKLF 81
                    A Q+       +   K ++G                      V  K  +L 
Sbjct: 104 ENIDESISRATQIPKKHNAEEQKEKILKGIEDGFVTDIFAIMYTQPEQLTGVPKKVPELM 163

Query: 82  EFRVQK-------DDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLR 133
           E R+         D  +  +G           GQ +DVT +T GKG  GA+KR      +
Sbjct: 164 EIRIAGGDLSTRLDFGISKLGEEVEIENVANAGQYIDVTAVTTGKGTQGAVKRWGIQVRK 223

Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--DDKR----- 186
             H      R  G+ G    P  V       G+MG  + T  N  ++ +  + +      
Sbjct: 224 RKHSRGKKKRHIGNLGPW-TPHHVRWQVPQMGQMGYQQRTEFNKRILRIGNNPEEINPDG 282

Query: 187 ----------GLILVKGCVPGAKKNSWILVRDSFKSAVN 215
                       +L+KG +PG  K   I +R + +   +
Sbjct: 283 GFLHYGLVRGKYVLIKGSIPGPTKR-LIRIRPAIRQGEH 320


>gi|148642822|ref|YP_001273335.1| 50S ribosomal protein L3P [Methanobrevibacter smithii ATCC 35061]
 gi|222445053|ref|ZP_03607568.1| hypothetical protein METSMIALI_00670 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350378|ref|ZP_05975795.1| ribosomal protein L3 [Methanobrevibacter smithii DSM 2374]
 gi|166233159|sp|A5UL89|RL3_METS3 RecName: Full=50S ribosomal protein L3P
 gi|148551839|gb|ABQ86967.1| ribosomal protein L3p [Methanobrevibacter smithii ATCC 35061]
 gi|222434618|gb|EEE41783.1| hypothetical protein METSMIALI_00670 [Methanobrevibacter smithii
           DSM 2375]
 gi|288861161|gb|EFC93459.1| ribosomal protein L3 [Methanobrevibacter smithii DSM 2374]
          Length = 336

 Score = 98.7 bits (245), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 57/278 (20%), Positives = 83/278 (29%), Gaps = 71/278 (25%)

Query: 4   GVVARKLGMTC-VYNIEGRR---------IPVTVLHLDNCQVVVHRTLDK---------- 43
           G+   K+GMT  +     +           PVTVL +    V+  R  +K          
Sbjct: 40  GLAGYKVGMTHALVTDSDKNSPTNGMDVFTPVTVLEVPPVVVMGIRAYEKTSRGLKVITE 99

Query: 44  --------------------NGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEF 83
                               N   A+    G        K +      V   PKKK   F
Sbjct: 100 VLADNLDEELSRKISLPKEYNKSEAIAKIQGVLDKTEDIKVLVHTNPKVTSVPKKKPDIF 159

Query: 84  RVQKDDDLLP---------VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLR 133
                              +G+          GQ VD    T GKGF G +KR       
Sbjct: 160 ECGIGGANPEEKLNTALELLGNEVKASDILNEGQFVDAIATTKGKGFQGVVKRWGIRIQY 219

Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV----------- 182
                +   R  GS G    P R       AG+MG ++ T  N +++ +           
Sbjct: 220 GKAVRAGKGRHVGSIGPW-TPSRTMWTVAQAGQMGYHKRTEFNKKILKIASADEVDQINP 278

Query: 183 --------DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
                     K   +LVKG +PG  K   +++R   + 
Sbjct: 279 DGGFVKYGLVKNDYVLVKGSLPGPSKR-LVILRQPIRP 315


>gi|312137075|ref|YP_004004412.1| lsu ribosomal protein l3p [Methanothermus fervidus DSM 2088]
 gi|311224794|gb|ADP77650.1| LSU ribosomal protein L3P [Methanothermus fervidus DSM 2088]
          Length = 333

 Score = 98.7 bits (245), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 58/281 (20%), Positives = 89/281 (31%), Gaps = 72/281 (25%)

Query: 7   ARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNG---YMAVQVGA 53
             K+GMT V  I+ ++           PVT++      V+  R  ++          V A
Sbjct: 43  GYKVGMTHVMAIDNKKNSPTEGMEVFTPVTIIETPPLTVMGIRAYERTSRGLKTLTDVLA 102

Query: 54  GEAKV---KNVSKPMRGFFSSV-----------------------------NVSPKKKLF 81
            + K    + ++ P                                        P+    
Sbjct: 103 DDLKEDLERRINLPKNYDKDKALDKIEENKDYIEEVRVLVHTNPRLVTGVPKKKPEIFEC 162

Query: 82  EFRVQKDDDLLP-----VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRAT 135
               +   + L      +G        F+ G+ VD   +T GKGF G +KR       A 
Sbjct: 163 GLGGKDPQEKLEYALELLGKDVKISEIFSEGEYVDTIAVTKGKGFQGPVKRWGIKIQNAK 222

Query: 136 HGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL---------EVVSVDDK- 185
              S   R  GS G    P R       AG+ G +R T  N          EV  ++ K 
Sbjct: 223 TARSGKGRHIGSLGPW-TPSRTMWRVPQAGQTGYHRRTEYNKMIMKIGTSDEVEKINPKG 281

Query: 186 ---------RGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
                       +LVKG VPG  K   I++R + +  V  +
Sbjct: 282 GFIRYGLVRNDYLLVKGSVPGPTKR-LIMLRKAIRPKVRQE 321


>gi|1644227|dbj|BAA11007.1| ribosomal protein L3 [Bacillus subtilis]
          Length = 60

 Score = 97.9 bits (243), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 35/59 (59%)

Query: 1  MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
          M  G++ RK+GMT V+   G  IPVTV+      V+  +T + +GY A+Q+G  + + K
Sbjct: 1  MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQLGFDDKREK 59


>gi|88603499|ref|YP_503677.1| 50S ribosomal protein L3P [Methanospirillum hungatei JF-1]
 gi|109893522|sp|Q2FU91|RL3_METHJ RecName: Full=50S ribosomal protein L3P
 gi|88188961|gb|ABD41958.1| LSU ribosomal protein L3P [Methanospirillum hungatei JF-1]
          Length = 337

 Score = 97.9 bits (243), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 58/278 (20%), Positives = 92/278 (33%), Gaps = 72/278 (25%)

Query: 4   GVVARKLGMTCVYNIE--------GR--RIPVTVLHLDNCQVVVHRTLDKNGY------- 46
           G    K+GMT V  ++        G+   +PVTV+ + + +V   R    + Y       
Sbjct: 41  GFAGYKVGMTHVIMVDDHAHSPNEGKDIMVPVTVIEVPDMRVAAIRVYRHDTYGNHVLTE 100

Query: 47  -MAVQVGAGEAKVKNVSKPMRGFFSSVNVS-----------------------------P 76
             A       ++  N+SK  +   +   +                              P
Sbjct: 101 VWADSFDKELSRRLNLSKNYKREEAEKKIREALEADKIVDVVALTYTRPSVLTGVPKKVP 160

Query: 77  KKKLFEFRVQKDDDLLP-----VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
                        +        +G  F   S F VGQ  DVT +T GKG  G +KR    
Sbjct: 161 DLMETRIDGGSMTERFEYGLSMLGKDFDIRSLFKVGQYTDVTAITKGKGTQGPVKRWGVH 220

Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD------- 183
             +  H      R  G+ G    P  V     M G+MG ++ T  N  ++ +        
Sbjct: 221 LRKRKHSRGKKERHVGTLGPW-TPHHVRWQVPMMGQMGYHQRTEFNKRLLKIGEDGAEIT 279

Query: 184 DKRGLI----------LVKGCVPGAKKNSWILVRDSFK 211
            + G I          L+KG VPG  K   + +R + +
Sbjct: 280 PEGGFINYGEVRARYVLIKGSVPGPSKR-LVRIRHAMR 316


>gi|268323275|emb|CBH36863.1| 50S ribosomal protein L3P [uncultured archaeon]
          Length = 315

 Score = 97.9 bits (243), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 52/265 (19%), Positives = 77/265 (29%), Gaps = 51/265 (19%)

Query: 4   GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
           G    K GMT +   +             IPVTV+     +V   R      Y    V  
Sbjct: 40  GFAGYKAGMTHIILTDNVSHSMTKGMEIAIPVTVIETPPMRVEGFRLYKSTHYGKQTVTE 99

Query: 54  GEAKVKNV--------------------SKPMRGFFSSV-NVSPKKKLFEFRVQKDDDLL 92
               +  +                     K + G       V   +   E          
Sbjct: 100 AYNDLSKIEELIKSNSTGLELRMISSTLPKAVNGVPKKKQEVMETQMGGEIGKDLKYAKE 159

Query: 93  PVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151
            +G   S    F  G  VD T +T GKG  G +KR       A    S   R  G+ G  
Sbjct: 160 MLGKEISAKDIFNEGDFVDATAVTKGKGTQGPVKRWGITIQNAKARRSGKGRHVGAIGGW 219

Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-----------------DDKRGLILVKGC 194
             P RV       G+ G  + T  N  ++ +                   +   +L+KG 
Sbjct: 220 -TPRRVRWRVPQLGQTGYQQRTEYNKRILKIGENGEEITPKGGFLNYGIVRNDYVLLKGS 278

Query: 195 VPGAKKNSWILVRDSFKSAVNCKGK 219
           VPG KK   + +  + ++       
Sbjct: 279 VPGPKKR-LVRLSRAIRAPPKLDAP 302


>gi|146302876|ref|YP_001190192.1| 50S ribosomal protein L3P [Metallosphaera sedula DSM 5348]
 gi|172046889|sp|A4YCW6|RL3_METS5 RecName: Full=50S ribosomal protein L3P
 gi|145701126|gb|ABP94268.1| LSU ribosomal protein L3P [Metallosphaera sedula DSM 5348]
          Length = 341

 Score = 97.9 bits (243), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 60/267 (22%), Positives = 94/267 (35%), Gaps = 61/267 (22%)

Query: 1   MRSGVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRT--LDKNGYMA 48
           +  G V  K+GMT ++ I+  R          +PVTVL      V+  R   L+  G  +
Sbjct: 41  VTLGFVGYKVGMTHIFMIDEDRSSSMFGKEIYVPVTVLETPPIYVLALRAYGLNNRGEHS 100

Query: 49  VQ------VG-AGE-----AKVKNVSKPMRGFFSS------------------------- 71
           V       +G  G+      +   + K  +                              
Sbjct: 101 VMGEVWGDLGDFGKFITRRIRGLKIDKEKKEHQLKDIESNLESVSYFRLLVSTQPHLIPA 160

Query: 72  -VNVSPKKKLFEFRVQKDDDLLP-----VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAM 124
               +P     +       + L      +G+  S    F  GQL+D+ G+T G GF G +
Sbjct: 161 LGKKTPDIVEVQIGGGNTKNQLEYGLKLLGNTLSVRDVFKEGQLMDIIGVTKGHGFQGVI 220

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
           KR+    L   H      R  G+ G               G+MG +R T  N  ++ + D
Sbjct: 221 KRYGVQELPRWHKHRKGSRKVGTKGPS---LGTPSYVPQPGQMGFHRRTEYNKRILKISD 277

Query: 185 KRGLILVKGCVP--GAKKNSWILVRDS 209
              LI  KG     G  KN+++LV+ S
Sbjct: 278 DTKLINPKGGFVRYGLVKNTYLLVQGS 304


>gi|255017639|ref|ZP_05289765.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL F2-515]
          Length = 79

 Score = 97.5 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/81 (46%), Positives = 54/81 (66%), Gaps = 3/81 (3%)

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
               HG S  HR  GS G    P RVFKNK + GRMGG ++T++NLE+V VD ++ ++LV
Sbjct: 1   GPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQITIQNLEIVKVDVEKNVLLV 58

Query: 192 KGCVPGAKKNSWILVRDSFKS 212
           KG VPGAKK + + ++ + K+
Sbjct: 59  KGNVPGAKK-ALVQIKTATKA 78


>gi|94993442|ref|YP_601540.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10750]
 gi|94546950|gb|ABF36996.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10750]
          Length = 78

 Score = 97.2 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 46/80 (57%), Positives = 57/80 (71%), Gaps = 3/80 (3%)

Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKG 193
             HG S  HR  GS G    P RVFKNK++AGRMGGNRVTV+NLE+V V  ++ +ILVKG
Sbjct: 1   MAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIVQVIPEKNVILVKG 58

Query: 194 CVPGAKKNSWILVRDSFKSA 213
            VPGAKK S I ++ + K+A
Sbjct: 59  NVPGAKK-SLITIKSAVKAA 77


>gi|126460189|ref|YP_001056467.1| 50S ribosomal protein L3P [Pyrobaculum calidifontis JCM 11548]
 gi|212288409|sp|A3MWI4|RL3_PYRCJ RecName: Full=50S ribosomal protein L3P
 gi|126249910|gb|ABO09001.1| LSU ribosomal protein L3P [Pyrobaculum calidifontis JCM 11548]
          Length = 338

 Score = 96.4 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/140 (30%), Positives = 63/140 (45%), Gaps = 22/140 (15%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             FT GQLVDV  +T GKG+ G +KR     L   H     HR  G+ G  Q P  +F  
Sbjct: 193 DVFTPGQLVDVIAVTKGKGYQGVVKRFGVTILPRWHKHRKGHRRTGTIGP-QAPALMFTQ 251

Query: 161 KKMAGRMGGNRVTVKNLEVVSVD------------DKRGL-----ILVKGCVPGAKKNSW 203
            +  G+MG ++ T  N  ++ +                G+     IL++G VPGA+K   
Sbjct: 252 PR-PGQMGFHQRTEYNKRILKIGDNGAEITPKSGFPHYGVIKGPYILLQGSVPGARKRLV 310

Query: 204 IL---VRDSFKSAVNCKGKV 220
           +L   VR   K+    + +V
Sbjct: 311 VLRYPVRPPKKAPPAAEPQV 330


>gi|303244465|ref|ZP_07330800.1| ribosomal protein L3 [Methanothermococcus okinawensis IH1]
 gi|302485163|gb|EFL48092.1| ribosomal protein L3 [Methanothermococcus okinawensis IH1]
          Length = 333

 Score = 96.4 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 56/136 (41%), Gaps = 20/136 (14%)

Query: 94  VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G   S    FT G+ +D   +T GKGF G +KR         H      R  GS G   
Sbjct: 178 LGKTLSINDVFTDGEFIDTIAITKGKGFQGPVKRWGIKIQFGKHRNKGVGRHTGSIGPW- 236

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-----------------DDKRGLILVKGCV 195
            P RV     MAG+MG ++ T  N  ++ +                 D K   +LVKG V
Sbjct: 237 TPKRVMWTVPMAGQMGYHQRTEYNKRILKIGNNGEEIVPKGGFLHYGDVKNNYVLVKGSV 296

Query: 196 PGAKKNSWILVRDSFK 211
            G  K   +++R + +
Sbjct: 297 QGPAKR-MVVLRGAIR 311


>gi|207108256|ref|ZP_03242418.1| 50S ribosomal protein L3 [Helicobacter pylori HPKX_438_CA4C1]
          Length = 128

 Score = 96.4 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 2/76 (2%)

Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
           G MKR NF G  A HG S  HR  GS G R+ PGRV K +KMAG  G   VT +N EV+S
Sbjct: 44  GVMKRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLS 101

Query: 182 VDDKRGLILVKGCVPG 197
            D +  ++++KG V G
Sbjct: 102 FDKESMVLVLKGSVAG 117


>gi|297619637|ref|YP_003707742.1| ribosomal protein L3 [Methanococcus voltae A3]
 gi|297378614|gb|ADI36769.1| ribosomal protein L3 [Methanococcus voltae A3]
          Length = 333

 Score = 96.0 bits (238), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 20/139 (14%)

Query: 94  VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G   S    F  G+++D   +T GKGF G++KR         H      R  GS G  +
Sbjct: 178 LGQKLSINDVFEAGEIIDTVAVTKGKGFQGSVKRWGIKIQFGKHQRKGVGRHTGSIGPWR 237

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK-----------------RGLILVKGCV 195
            P RV  +  + G+MG ++ T  N  +  +  +                  G +LVKG V
Sbjct: 238 -PRRVMWSVPLPGQMGFHQRTEYNKRIFKIGAEGTEVTPKGGFLNYGVLKNGYVLVKGTV 296

Query: 196 PGAKKNSWILVRDSFKSAV 214
            G  K   +++R + ++ V
Sbjct: 297 QGPAKR-LVMIRGAIRAPV 314


>gi|18313001|ref|NP_559668.1| 50S ribosomal protein L3P [Pyrobaculum aerophilum str. IM2]
 gi|42559672|sp|Q8ZW52|RL3_PYRAE RecName: Full=50S ribosomal protein L3P
 gi|18160502|gb|AAL63850.1| ribosomal protein L3 [Pyrobaculum aerophilum str. IM2]
          Length = 338

 Score = 96.0 bits (238), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 24/141 (17%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             FT GQLVDV  +T GKG+ G +KR     L   H     HR  G+ G  Q P  +F  
Sbjct: 193 DVFTPGQLVDVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIGP-QAPAVMFTQ 251

Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRG------------------LILVKGCVPGAKKNS 202
            +  G+MG ++ T  N  ++ +  + G                   IL++G VPGA+K  
Sbjct: 252 PR-PGQMGFHQRTEYNKRLLKI-GENGAEITPKSGFPHYGVVKGPYILIQGSVPGARKRL 309

Query: 203 WIL---VRDSFKSAVNCKGKV 220
            +L   VR   K+    + +V
Sbjct: 310 VVLRHPVRPPRKAPPAAEPQV 330


>gi|296109263|ref|YP_003616212.1| ribosomal protein L3 [Methanocaldococcus infernus ME]
 gi|295434077|gb|ADG13248.1| ribosomal protein L3 [Methanocaldococcus infernus ME]
          Length = 333

 Score = 96.0 bits (238), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 20/137 (14%)

Query: 94  VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G   +    F  G+LVD  G+T GKGF G +KR         H      R  GS G  Q
Sbjct: 178 LGKQLNITDVFQEGELVDTIGVTKGKGFQGVVKRWGVKIQPRKHRRQGVGRHVGSIGPWQ 237

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCV 195
            P  +       G+MG ++ T  N  ++ + +                 K   +++KG V
Sbjct: 238 -PKMIMWTVPRPGQMGYHQRTEYNKRILKIGNNGEEITPEGGFPHYGVIKNNYVILKGSV 296

Query: 196 PGAKKNSWILVRDSFKS 212
            G +K   I++R + + 
Sbjct: 297 QGPQKR-LIVLRSAIRP 312


>gi|169929925|gb|ACB05634.1| 50S ribosomal protein L3 [Leptospira santarosai serovar Tropica]
 gi|169929928|gb|ACB05636.1| 50S ribosomal protein L3 [Leptospira santarosai serovar Shermani]
          Length = 93

 Score = 96.0 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 2/92 (2%)

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           + G+G+ G +KR +          S  HR  GS G    P RVFK  K+ GR G  + T+
Sbjct: 1   SKGRGYQGVVKR-HGHAGGPGGHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQQTTI 59

Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206
           +NL+VV +++++ L+ V G +PG + N+ I +
Sbjct: 60  RNLKVVRINEEKNLLFVSGSIPGTE-NTVITI 90


>gi|119873281|ref|YP_931288.1| 50S ribosomal protein L3P [Pyrobaculum islandicum DSM 4184]
 gi|212288410|sp|A1RVG3|RL3_PYRIL RecName: Full=50S ribosomal protein L3P
 gi|119674689|gb|ABL88945.1| LSU ribosomal protein L3P [Pyrobaculum islandicum DSM 4184]
          Length = 342

 Score = 95.2 bits (236), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 22/140 (15%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             FT GQLVDV  +T GKG+ G +KR     L   H     HR  G+ G  Q P  +F  
Sbjct: 197 EVFTAGQLVDVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIGP-QAPAVMFTQ 255

Query: 161 KKMAGRMGGNRVTVKNLEVVSVD-----------------DKRGLILVKGCVPGAKKNSW 203
            +  G+MG ++ T  N  ++ +                   K   IL++G VPGA+K   
Sbjct: 256 PR-PGQMGFHQRTEYNKRIIKIGDNGAEITPKSGFLHYGVVKGPYILIQGTVPGARKRLV 314

Query: 204 IL---VRDSFKSAVNCKGKV 220
           +L   VR   K+    + +V
Sbjct: 315 VLRYPVRPPKKAPPAAEPQV 334


>gi|198477055|ref|XP_002136783.1| GA27952 [Drosophila pseudoobscura pseudoobscura]
 gi|198145102|gb|EDY71806.1| GA27952 [Drosophila pseudoobscura pseudoobscura]
          Length = 229

 Score = 95.2 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 14/127 (11%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-------------NGYMA 48
           R GV+ARK+G   ++   G+++  T+L + +  V+ +   ++             N Y  
Sbjct: 104 RCGVIARKIGQYPLWLKNGKKVRTTLLQIADNHVIKYMPHEECRPQKNLSRVHNSNQYGC 163

Query: 49  VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQL 108
           + VGA       ++K   G F    V PKK +  F V  D  L P G+  + S F VG+ 
Sbjct: 164 LLVGAESTNPSMLTKEYCGIFRDAGVVPKKNIMRFMVSPDGALAP-GTPLNISRFRVGEY 222

Query: 109 VDVTGMT 115
           VDV G T
Sbjct: 223 VDVRGKT 229


>gi|169929931|gb|ACB05638.1| 50S ribosomal protein L3 [Leptospira noguchii serovar Proechymis]
 gi|169929934|gb|ACB05640.1| 50S ribosomal protein L3 [Leptospira noguchii serovar Panama]
          Length = 93

 Score = 95.2 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 2/92 (2%)

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           + G+G+ G +KR +          S  HR  GS G    P RVFK  K+ GR G  + TV
Sbjct: 1   SKGRGYQGVVKR-HGHAGGPGAHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQQTTV 59

Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206
           +NL+VV +++++ L+ V G VPG   N+ I +
Sbjct: 60  RNLKVVRINEEKNLLFVSGAVPGTA-NTVITI 90


>gi|119719148|ref|YP_919643.1| 50S ribosomal protein L3P [Thermofilum pendens Hrk 5]
 gi|119524268|gb|ABL77640.1| LSU ribosomal protein L3P [Thermofilum pendens Hrk 5]
          Length = 334

 Score = 95.2 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 58/278 (20%), Positives = 92/278 (33%), Gaps = 72/278 (25%)

Query: 4   GVVARKLGMTCV----------YNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
           G    K+GM  V          +  + R    TV+ +   +VV  R  +K  Y    +  
Sbjct: 39  GFAGYKVGMLHVIGVEMNKNSPFYGQERFYAATVIEVPPLKVVAVRVYEKTPYGKKTLCE 98

Query: 54  GEAK-------------------VKNVSKPMRGFFSSVNVSP--------------KKKL 80
             AK                    + + K          V                K +L
Sbjct: 99  VWAKDLPKDLERVFPLPKDQSYHEEQLKKLEEVKSRVSEVRVLAATQPRLSGLGKKKPEL 158

Query: 81  FEFRVQKDDD------LLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLR 133
            E  V    +      L  +G   +    F  G  +DV  +T GKGF G++KR     + 
Sbjct: 159 IEIAVGGPPEKALSLALEKLGKDLTISDVFKEGDYIDVIAVTKGKGFQGSVKRFGVEEMP 218

Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-DDK------- 185
             H     H   GS G  Q P  +F      G++G ++ T  N  ++ V D +       
Sbjct: 219 RWHKHRKGHSRIGSVGP-QKPAIMF-YTPFPGQLGFHQRTEYNKRILKVGDAESLKEINP 276

Query: 186 -----------RGLILVKGCVPGAKKNSWILVRDSFKS 212
                         I+V+G VPGA K   + +R + ++
Sbjct: 277 PGGWPHYGLVRSQFIIVEGSVPGAVKR-LVRLRHAIRA 313


>gi|256810689|ref|YP_003128058.1| ribosomal protein L3 [Methanocaldococcus fervens AG86]
 gi|256793889|gb|ACV24558.1| ribosomal protein L3 [Methanocaldococcus fervens AG86]
          Length = 335

 Score = 95.2 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 57/271 (21%), Positives = 88/271 (32%), Gaps = 69/271 (25%)

Query: 9   KLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG---- 54
           K GMT  +  E        G+ +  PVTVL      V   R   +N    +         
Sbjct: 46  KAGMTHAFIKEDNPKSPNAGQEVFTPVTVLEAPPINVCAIRVYGRNERNYLTTLTEVWAD 105

Query: 55  ------EAKVKNVSKPMRGFFSSVNV------------------------SPKKKLFEFR 84
                 E K+K   K  R     +                           P+       
Sbjct: 106 NLDKELERKIKLPKKEERKTVEDLEAIKDKIEDVRVLVHTNPKLTCLPKKKPEILEIRIG 165

Query: 85  VQKDDDLLP-----VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGV 138
            +  ++ L      +G   +    F  G+LVD  G+T GKGF G +KR         H  
Sbjct: 166 GKDIEERLNYAKEILGKQLNITDVFQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHAR 225

Query: 139 SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD-------------- 184
               R  GS G  Q P  V     M G+MG ++ T  N  ++ + +              
Sbjct: 226 KGVGRHVGSIGPWQ-PKMVMWTVPMPGQMGYHQRTEYNKRILKIGNNGEEITPKGGFLHY 284

Query: 185 ---KRGLILVKGCVPGAKKNSWILVRDSFKS 212
              +   +++KG V G  K   I++R + + 
Sbjct: 285 GVIRNNYVVLKGSVQGPAKR-LIVLRSAIRP 314


>gi|169929919|gb|ACB05630.1| 50S ribosomal protein L3 [Leptospira borgpetersenii serovar
           Hardjo-bovis]
 gi|169929922|gb|ACB05632.1| 50S ribosomal protein L3 [Leptospira borgpetersenii serovar
           Hardjo-bovis]
 gi|169929955|gb|ACB05654.1| 50S ribosomal protein L3 [Leptospira meyeri serovar Ranarum]
          Length = 93

 Score = 94.8 bits (235), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 2/92 (2%)

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           + G+GF G +KR +          S  HR  GS G    P RVFK  K+ GR G  + TV
Sbjct: 1   SKGRGFQGVVKR-HGHAGGPGGHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQQTTV 59

Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206
           +NL+VV +++++ L+ V G VPG   N+ I +
Sbjct: 60  RNLKVVRINEEKNLVFVSGAVPG-TTNTVITI 90


>gi|325958531|ref|YP_004289997.1| 50S ribosomal protein L3 [Methanobacterium sp. AL-21]
 gi|325329963|gb|ADZ09025.1| ribosomal protein L3 [Methanobacterium sp. AL-21]
          Length = 337

 Score = 94.8 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 52/276 (18%), Positives = 92/276 (33%), Gaps = 72/276 (26%)

Query: 7   ARKLGMTCVYNIEGRR----------IPVTVLHLDNCQV------------------VVH 38
             K+GMT V  ++  +           PVT+L      V                  V+ 
Sbjct: 43  GYKVGMTHVTMLDNVKNSPTSGMEVSSPVTILETPPVVVMGVRAYRKDTRGLKTLNDVMA 102

Query: 39  RTLDKNGYMAVQVGAG------------------EAKVKNVSKPMR--GFFSSV--NVSP 76
           + LD++    + +                     + +V   +KP    G        +  
Sbjct: 103 KDLDEDLTRKITLPKDYDVEAKLDEMKEQLDEVEDIRVLLHTKPRLASGIPKKKPEIIEC 162

Query: 77  KKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRAT 135
                    + +     +G   +    F+ G+ VD   +T GKGF G +KR         
Sbjct: 163 GIGGKSVEDKFEFARSLLGKEVNPADSFSDGEHVDTIAVTKGKGFQGPVKRFGVRIQYGK 222

Query: 136 HGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK---------- 185
              S   R  GS G    P R      MAG+MG ++ T  N +++ + D+          
Sbjct: 223 AARSSKARHVGSIGPW-TPARTMWTVAMAGQMGYHKRTEFNKKILRIADESQVDEVNPKG 281

Query: 186 ---------RGLILVKGCVPGAKKNSWILVRDSFKS 212
                     G +++KG +PG  K   +++R + + 
Sbjct: 282 GFVKYGLIKNGYVMIKGSIPGPSKR-LVILRKAVRP 316


>gi|13310854|gb|AAK18645.1|AF250390_3 ribosomal protein L3 [Candidatus Carsonella ruddii]
          Length = 136

 Score = 94.8 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 38/101 (37%), Positives = 60/101 (59%), Gaps = 4/101 (3%)

Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
             + + ++ ++ GKGF+G +K+ NF     +HG S+S+R+ GS G  QDPGRVFK KKM 
Sbjct: 36  EFKTLKISSISKGKGFAGVIKKWNFKTKDKSHGCSLSYRTLGSVGQCQDPGRVFKGKKMP 95

Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWIL 205
           G+MG  ++T     V     K  +  +K  +PG+ KN ++ 
Sbjct: 96  GKMGNKKITFF---VNIFLRKNDIFFIKTIIPGS-KNDYLY 132


>gi|169929907|gb|ACB05622.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Lai]
 gi|169929910|gb|ACB05624.1| 50S ribosomal protein L3 [Leptospira interrogans serovar
           Icterohaemorrhagiae]
 gi|169929913|gb|ACB05626.1| 50S ribosomal protein L3 [Leptospira interrogans serovar
           Hardjo-prajitno]
 gi|169929916|gb|ACB05628.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Malaya]
 gi|169929943|gb|ACB05646.1| 50S ribosomal protein L3 [Leptospira kirschneri serovar Mozdok]
 gi|169929946|gb|ACB05648.1| 50S ribosomal protein L3 [Leptospira kirschneri serovar Bim]
          Length = 93

 Score = 94.5 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 2/92 (2%)

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           + G+G+ G +KR +          S  HR  GS G    P RVFK  K+ GR G  + TV
Sbjct: 1   SKGRGYQGVVKR-HGHAGGPGAHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQKTTV 59

Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206
           +NL+VV +++++ L+ V G VPG   N+ I +
Sbjct: 60  RNLKVVRINEEKNLLFVSGAVPGTA-NTVITI 90


>gi|330835825|ref|YP_004410553.1| 50S ribosomal protein L3P [Metallosphaera cuprina Ar-4]
 gi|329567964|gb|AEB96069.1| 50S ribosomal protein L3P [Metallosphaera cuprina Ar-4]
          Length = 341

 Score = 94.5 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 61/270 (22%), Positives = 93/270 (34%), Gaps = 61/270 (22%)

Query: 4   GVVARKLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHRTLDKNGY-MAVQVG 52
           G +  K GMT VY I+        G+ I  PVTV+      V+  R    +G   ++ +G
Sbjct: 44  GFIGYKAGMTHVYMIDEDKSSSMYGKEIYMPVTVIETPPILVMSLRAYAIDGKGESMSIG 103

Query: 53  -------------AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFR--VQKDDDLLP---- 93
                            K   + K           S    +  FR  V     L+P    
Sbjct: 104 EVWGDLSDKSKYITRRIKSLKIQKEKTEQQLKKIESNLDNISFFRLLVSTQPYLIPSLGK 163

Query: 94  -------------------------VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRH 127
                                    +G+  S    F  GQL+D+ G+T G GF G +KR+
Sbjct: 164 KTPDIAEIQIGGGNPKAQLELGLKLLGNTVSVRDVFNEGQLIDILGVTTGYGFQGVIKRY 223

Query: 128 NFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRG 187
               L   H      R  G+ G               G+MG +R T  N  ++ + D+  
Sbjct: 224 GVQELPRWHKHRKGSRKVGTKGPS---LGTPSYVPQPGQMGYHRRTEYNKRILRISDEIN 280

Query: 188 LILVKGCVP--GAKKNSWILVRDSFKSAVN 215
            I  KG     G  +N+++LV+ S    + 
Sbjct: 281 QINPKGGFVRYGLVRNTYLLVQGSTIGPIK 310


>gi|14600545|ref|NP_147062.1| 50S ribosomal protein L3P [Aeropyrum pernix K1]
 gi|6685859|sp|Q9YFM2|RL3_AERPE RecName: Full=50S ribosomal protein L3P
 gi|5103618|dbj|BAA79139.1| 50S ribosomal protein L3P [Aeropyrum pernix K1]
          Length = 344

 Score = 94.1 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 54/279 (19%), Positives = 83/279 (29%), Gaps = 75/279 (26%)

Query: 6   VARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKN--------GYM 47
           +  + GMT V+ ++ R           +PVT++      V   R    +        G  
Sbjct: 46  LGYRAGMTHVFMVDDRPGRPTSGKEIFVPVTIVETPPMFVAAVRLYGYDPNRGRYSLGEA 105

Query: 48  AVQ-----------VGAGEAKVKNVSKPMRGFFSSVN-------VSPKKKLFEFRVQKDD 89
             Q              G      + K +                 PK      + + D 
Sbjct: 106 WAQPPPELELQRRISTLGSFDTDKMLKSLEERLDKAEDVRLIAASQPKLAGGLSKKKPDL 165

Query: 90  DLLPVGSVFSP------------------SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             + VG V                       F  GQLVDV  +T GKGF G +KR     
Sbjct: 166 LEIKVGGVSDVTKLFDYAKDVLGNLIAVNDVFEEGQLVDVIAVTKGKGFQGVIKRWGVKE 225

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK------ 185
           L   H      R     G R      F     AG+ G +R T  N  ++ +DD       
Sbjct: 226 LPRWHKHRKGSRR---IGARSHGRSTFWETPQAGQTGFHRRTEYNKRILMIDDDGYKVTP 282

Query: 186 -----------RGLILVKGCVPGAKKNSWILVRDSFKSA 213
                         +++ G +PG  K   ++ R + +  
Sbjct: 283 AGGFLRYGVVRSTFVMLSGSIPGTPKRPIVM-RWAIRPP 320


>gi|169929949|gb|ACB05650.1| 50S ribosomal protein L3 [Leptospira alexanderi serovar Mengla]
 gi|169929952|gb|ACB05652.1| 50S ribosomal protein L3 [Leptospira alexanderi serovar Manzhuang]
          Length = 93

 Score = 93.7 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 2/92 (2%)

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           + G+GF G +KR +          S  HR  GS G    P RVFK  K+ GR G  + TV
Sbjct: 1   SKGRGFQGVVKR-HGHAGGPGGHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSLQTTV 59

Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206
           +NL+VV +++++ L+ V G VPG   N+ I +
Sbjct: 60  RNLKVVRINEEKNLVFVSGSVPGTA-NTVITI 90


>gi|169929937|gb|ACB05642.1| 50S ribosomal protein L3 [Leptospira weilii serovar Sarmin]
 gi|169929940|gb|ACB05644.1| 50S ribosomal protein L3 [Leptospira weilii serovar Celledoni]
          Length = 93

 Score = 93.7 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 2/92 (2%)

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           + G+GF G +KR +          S  HR  GS G    P RVFK  K+ GR G  + TV
Sbjct: 1   SKGRGFQGVVKR-HGHAGGPGGHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSLQTTV 59

Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206
           +NL+VV +++++ L+ V G VPG   N+ I +
Sbjct: 60  RNLKVVRINEEKNLVFVSGAVPGTA-NTVITI 90


>gi|116335057|ref|YP_802552.1| ribosomal protein L3 [Candidatus Carsonella ruddii PV]
 gi|13272299|gb|AAK17082.1|AF274444_12 ribosomal protein L3 [Candidatus Carsonella ruddii]
 gi|116235338|dbj|BAF35186.1| ribosomal protein L3 [Candidatus Carsonella ruddii PV]
          Length = 136

 Score = 92.9 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/100 (39%), Positives = 60/100 (60%), Gaps = 4/100 (4%)

Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166
           + + +  ++ GKGF+G +K+ NF     +HG S+S+R+ GS G  QDPGRVFK KKM G+
Sbjct: 38  KTLKIISISKGKGFAGVIKKWNFKTKDKSHGCSLSYRTLGSVGQCQDPGRVFKGKKMPGK 97

Query: 167 MGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206
           MG  + T     V     K+ +  +K  +PG+ KN ++ V
Sbjct: 98  MGNKKNTFF---VDVFLRKKNIFFIKKIIPGS-KNDYLYV 133


>gi|146319921|ref|YP_001199632.1| ribosomal protein L3 [Streptococcus suis 98HAH33]
 gi|145690727|gb|ABP91232.1| Ribosomal protein L3 [Streptococcus suis 98HAH33]
          Length = 78

 Score = 92.9 bits (230), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 43/80 (53%), Positives = 54/80 (67%), Gaps = 3/80 (3%)

Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKG 193
             HG S  HR  GS G    P RVFK K +AGRMGGNRVT++NLEVV V  ++ +IL+KG
Sbjct: 1   MAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGNRVTIQNLEVVQVVPEKNVILIKG 58

Query: 194 CVPGAKKNSWILVRDSFKSA 213
            VPGAKK S I ++ + K+ 
Sbjct: 59  NVPGAKK-SLITIKSAVKAG 77


>gi|45359106|ref|NP_988663.1| 50S ribosomal protein L3P [Methanococcus maripaludis S2]
 gi|74553576|sp|Q6LX10|RL3_METMP RecName: Full=50S ribosomal protein L3P
 gi|45047981|emb|CAF31099.1| LSU Ribosomal protein L3P [Methanococcus maripaludis S2]
          Length = 334

 Score = 92.5 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 3/117 (2%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F  G+++D   +T GKGF G++KR         H      R  GS G  + P RV   
Sbjct: 187 DVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGPWR-PRRVMWT 245

Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDSFKSAVN 215
             + G+MG ++ T  N  ++ +  +   I  KG     GA KN +++V+ + +    
Sbjct: 246 VPLPGQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGAVKNGYVVVKGTVQGPAK 302


>gi|20089942|ref|NP_616017.1| 50S ribosomal protein L3P [Methanosarcina acetivorans C2A]
 gi|42559661|sp|Q8TRU7|RL3_METAC RecName: Full=50S ribosomal protein L3P
 gi|19914903|gb|AAM04497.1| ribosomal protein L3p [Methanosarcina acetivorans C2A]
          Length = 337

 Score = 92.1 bits (228), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 62/285 (21%), Positives = 101/285 (35%), Gaps = 72/285 (25%)

Query: 7   ARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKN--GYMAVQ-VGA 53
             K+GMT V  ++  +          +PVTV+     +V   R   ++  G  A+  V A
Sbjct: 44  GYKVGMTHVIMVDDTKNSLTQGMEISVPVTVIETPAIRVAAIRAYAEDSTGEKAIAEVWA 103

Query: 54  GEAKV---KNVSKPMRGFFSSVNVSPKKKLFEFRVQK----------------------- 87
            +      + +  P  G  +    +  K + E RV                         
Sbjct: 104 ADLDPELKRRIPIPAAGNQAEALENIGKLIEEGRVSDVRAVIYTLPKSLTGVPKKVPDIM 163

Query: 88  -------------DDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLR 133
                        +     +G++ S    F  G LVD   +TIGKG  G +KR     ++
Sbjct: 164 ESGISARDLGTKFEYSKTILGTLVSVTDVFKNGTLVDTAAITIGKGTQGPVKRWGIQLMK 223

Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--DDKR----- 186
             H    S R  G+ G   +P RV       G+MG ++ T  N  ++ +  D +      
Sbjct: 224 GKHSRQGSLRQVGTLGAF-NPSRVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEEVTPEG 282

Query: 187 ----------GLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
                       IL+KG VPG  K   I +RD  ++     G+ +
Sbjct: 283 GFINYGLVRGDYILIKGSVPGPSKR-LIRLRDPIRAKKADLGEPN 326


>gi|327311641|ref|YP_004338538.1| 50S ribosomal protein L3P [Thermoproteus uzoniensis 768-20]
 gi|326948120|gb|AEA13226.1| 50S ribosomal protein L3P [Thermoproteus uzoniensis 768-20]
          Length = 337

 Score = 92.1 bits (228), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 22/136 (16%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F+ GQLVDV  +T GKG+ G +KR     L   H     HR  G+ G  Q P  +F  
Sbjct: 194 DVFSAGQLVDVLAITRGKGWQGVIKRFGVKILPRWHKHRKGHRRTGTIGP-QSPALMFTQ 252

Query: 161 KKMAGRMGGNRVTVKNLEVVSVD-----------------DKRGLILVKGCVPGAKKNSW 203
            +  G+MG ++ T  N  ++ +                   K   +++ G VPG +K   
Sbjct: 253 PR-PGQMGFHQRTEYNKRILKIGNNPAEINPKGGWPHYGLVKSDFLVLSGSVPGVQKRLV 311

Query: 204 IL---VRDSFKSAVNC 216
           +L   VR   K+  + 
Sbjct: 312 VLRHPVRPPPKAPTSA 327


>gi|159905511|ref|YP_001549173.1| 50S ribosomal protein L3P [Methanococcus maripaludis C6]
 gi|226730533|sp|A9A9B8|RL3_METM6 RecName: Full=50S ribosomal protein L3P
 gi|159887004|gb|ABX01941.1| ribosomal protein L3 [Methanococcus maripaludis C6]
          Length = 334

 Score = 92.1 bits (228), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 3/117 (2%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F  G+++D   +T GKGF G++KR         H      R  GS G  + P RV   
Sbjct: 187 DVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGPWR-PRRVMWT 245

Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDSFKSAVN 215
             + G+MG ++ T  N  ++ +  +   I  KG     GA KN +++V+ + +    
Sbjct: 246 VPLPGQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGAVKNGYVVVKGTVQGPAK 302


>gi|150402715|ref|YP_001330009.1| 50S ribosomal protein L3P [Methanococcus maripaludis C7]
 gi|166233157|sp|A6VHD2|RL3_METM7 RecName: Full=50S ribosomal protein L3P
 gi|150033745|gb|ABR65858.1| ribosomal protein L3 [Methanococcus maripaludis C7]
          Length = 334

 Score = 92.1 bits (228), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 3/117 (2%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F  G+++D   +T GKGF G++KR         H      R  GS G  + P RV   
Sbjct: 187 DVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGPWR-PRRVMWT 245

Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDSFKSAVN 215
             + G+MG ++ T  N  ++ +  +   I  KG     GA KN +++V+ + +    
Sbjct: 246 VPLPGQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGAVKNGYVVVKGTVQGPAK 302


>gi|219851107|ref|YP_002465539.1| 50S ribosomal protein L3P [Methanosphaerula palustris E1-9c]
 gi|254803682|sp|B8GKD3|RL3_METPE RecName: Full=50S ribosomal protein L3P
 gi|219545366|gb|ACL15816.1| ribosomal protein L3 [Methanosphaerula palustris E1-9c]
          Length = 337

 Score = 91.8 bits (227), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 51/279 (18%), Positives = 89/279 (31%), Gaps = 72/279 (25%)

Query: 7   ARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHR--TLDKNGYMAV----- 49
             K+GMT V  ++  +          +PVT++ +   +V   R  T D  G  A+     
Sbjct: 44  GYKVGMTHVIMVDDHKNSPTEGKDIMVPVTIIEIPPMKVAAIRAYTADTYGKRALTEVWT 103

Query: 50  -QVGAGEAKVKNVSK---PMRGFFSSVNVSPKKKLFEFR----------------VQKDD 89
            Q+     +   + K      GF +         + E                  V +  
Sbjct: 104 EQLSTLLGRRITLPKKYSEEAGFKALSEAVAAGTVTELHALMYTQPDTLTGVPKKVPELM 163

Query: 90  DLLPVGSVFS----------------PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLR 133
           ++   G                          G+  DVT +T GKG  G +KR      +
Sbjct: 164 EVCIGGGTLEQKVEFAQSIIGNEVNLADVIGAGEYADVTAITTGKGTQGPVKRWGIMLRK 223

Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD--------- 184
             H      R  G+ G   +P  V       G+MG  + T  N  ++ + +         
Sbjct: 224 RKHSRGGKKRHIGNLGPW-NPHHVRWQVPQMGQMGYQQRTDFNKRILKIGENGTDITPAG 282

Query: 185 --------KRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
                   +   +++KG VPG  K   I +R + +   +
Sbjct: 283 GFLHYGLLRNPYVMIKGSVPGPVKR-LIRIRPAVRKGEH 320


>gi|261403779|ref|YP_003248003.1| ribosomal protein L3 [Methanocaldococcus vulcanius M7]
 gi|261370772|gb|ACX73521.1| ribosomal protein L3 [Methanocaldococcus vulcanius M7]
          Length = 335

 Score = 91.8 bits (227), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 35/137 (25%), Positives = 55/137 (40%), Gaps = 20/137 (14%)

Query: 94  VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G   +    F  G+L D  G+T GKGF G +KR         H      R  GS G  Q
Sbjct: 180 LGKQLNITDVFQEGELADTIGITKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQ 239

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCV 195
            P  +     M G+MG ++ T  N  ++ + +                 K   +++KG V
Sbjct: 240 -PKMIMWTVPMPGQMGYHQRTEYNKRILKIGNNGEEITPKGGFLHYGVIKNNYVVLKGSV 298

Query: 196 PGAKKNSWILVRDSFKS 212
            G  K   I++R + + 
Sbjct: 299 QGPAKR-LIVLRRAIRP 314


>gi|124028157|ref|YP_001013477.1| 50S ribosomal protein L3P [Hyperthermus butylicus DSM 5456]
 gi|123978851|gb|ABM81132.1| 50S ribosomal protein L3P [Hyperthermus butylicus DSM 5456]
          Length = 319

 Score = 91.8 bits (227), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 40/147 (27%), Positives = 54/147 (36%), Gaps = 26/147 (17%)

Query: 94  VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRS-HGSTGCR 151
           +GS       F  GQ VDV  +T GKGF G +KR     L   H      RS  G+ G  
Sbjct: 164 LGSELKVSDVFREGQFVDVIAVTKGKGFQGVIKRFGVKELPRWHKHRKGSRSGPGTRGPA 223

Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL------------------ILVKG 193
                 +      G+MG +R T  N  ++ +    GL                  IL+ G
Sbjct: 224 TSFS--WSEVPQPGQMGFHRRTEYNKRILKI-GDNGLEITPAGGFLHYGIVRSTYILLAG 280

Query: 194 CVPGAKKNSWIL---VRDSFKSAVNCK 217
            +PG  K   +L   VR  +      K
Sbjct: 281 SIPGTPKRPIVLRHPVRPRWMPEAPPK 307



 Score = 41.3 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 13/52 (25%)

Query: 6  VARKLGMTCVY---NIEGRR-------IPVTVLHLDNCQVVVHRTLDKNGYM 47
          +A K+GMT VY   +  G         +PVTVL      V   R     GY 
Sbjct: 18 LAYKVGMTHVYVIDDEPGSITHGREIFMPVTVLEAPPMVVTAVRV---YGYD 66


>gi|134045079|ref|YP_001096565.1| 50S ribosomal protein L3P [Methanococcus maripaludis C5]
 gi|166233156|sp|A4FVY2|RL3_METM5 RecName: Full=50S ribosomal protein L3P
 gi|132662704|gb|ABO34350.1| LSU ribosomal protein L3P [Methanococcus maripaludis C5]
          Length = 334

 Score = 91.4 bits (226), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 3/117 (2%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F  G+++D   +T GKGF G++KR         H      R  GS G  + P RV   
Sbjct: 187 DVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGPWR-PRRVMWT 245

Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDSFKSAVN 215
             + G+MG ++ T  N  ++ +  +   I  KG     GA KN +++V+ + +    
Sbjct: 246 VPLPGQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGAVKNGYVVVKGTVQGPAK 302


>gi|313233372|emb|CBY24487.1| unnamed protein product [Oikopleura dioica]
          Length = 303

 Score = 91.0 bits (225), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 3/120 (2%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTL-DKNGYM-AVQVGAGEAKVK 59
           R+G+V +K+G+  ++  +G R+  T+L + NC V+ +    + NG   AV VGAG  K  
Sbjct: 165 RTGMVMKKIGVEPMWLRDGTRVVSTILQVQNCHVIKYFPKHEFNGRTGAVIVGAGTGKPF 224

Query: 60  NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
             ++    +     ++PK  L  F + ++  L P G+     +F VGQ VDV   ++  G
Sbjct: 225 LKNENYTQYCLDAGLTPKAHLARFPITENARLQP-GTPLHVQHFHVGQYVDVVLKSVDFG 283


>gi|149928577|ref|ZP_01916799.1| ribosomal protein L3 [Limnobacter sp. MED105]
 gi|149822702|gb|EDM81967.1| ribosomal protein L3 [Limnobacter sp. MED105]
          Length = 60

 Score = 91.0 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 36/60 (60%)

Query: 1  MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
          M  G++ RK+GM  ++   G  IPVTV+ + + +V   +TL+++GY AVQ+  G  +   
Sbjct: 1  MSLGLIGRKIGMMRIFTDAGVSIPVTVVDVSSNRVAQLKTLEQDGYTAVQLAYGSKRASR 60


>gi|227830387|ref|YP_002832167.1| 50S ribosomal protein L3P [Sulfolobus islandicus L.S.2.15]
 gi|229579206|ref|YP_002837604.1| 50S ribosomal protein L3P [Sulfolobus islandicus Y.G.57.14]
 gi|229582042|ref|YP_002840441.1| 50S ribosomal protein L3P [Sulfolobus islandicus Y.N.15.51]
 gi|284997894|ref|YP_003419661.1| ribosomal protein L3 [Sulfolobus islandicus L.D.8.5]
 gi|259709738|sp|C3MQ59|RL3_SULIL RecName: Full=50S ribosomal protein L3P
 gi|259709740|sp|C3NHA9|RL3_SULIN RecName: Full=50S ribosomal protein L3P
 gi|259709741|sp|C3NEE3|RL3_SULIY RecName: Full=50S ribosomal protein L3P
 gi|227456835|gb|ACP35522.1| ribosomal protein L3 [Sulfolobus islandicus L.S.2.15]
 gi|228009920|gb|ACP45682.1| ribosomal protein L3 [Sulfolobus islandicus Y.G.57.14]
 gi|228012758|gb|ACP48519.1| ribosomal protein L3 [Sulfolobus islandicus Y.N.15.51]
 gi|284445789|gb|ADB87291.1| ribosomal protein L3 [Sulfolobus islandicus L.D.8.5]
          Length = 351

 Score = 90.6 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 63/301 (20%), Positives = 100/301 (33%), Gaps = 101/301 (33%)

Query: 4   GVVARKLGMTCVYNIE--------GRRI--PVTVLHL-----------------DNCQVV 36
           G V  K+GM+ V+ I+        G+ I  PVTVL +                 +   + 
Sbjct: 44  GFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVIT 103

Query: 37  -----------------------------VHRTLDKNG--------------YMAVQVGA 53
                                          +  +K G              Y  + V  
Sbjct: 104 EYWSPSSLQFLDITRRIHSLSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYFRLLVAT 163

Query: 54  GEAKVKNVSK--PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVD 110
              K+ ++ K  P            K +L       D  L  +G   S    F  GQL+D
Sbjct: 164 QPRKIPSLGKKVPDLVEIQIGGGEKKAQL-------DYALNVLGKEISIKDVFKEGQLID 216

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           V G+T GKGF+G +KR++   L   H      R     G R             G++G +
Sbjct: 217 VVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRK---IGTRGPSLGTPSYTPQPGQLGFH 273

Query: 171 RVTVKNLEVVSV--DDK--------------RG-LILVKGCVPGAKKNSWILVRDSFKSA 213
           R T  N  ++ +  D K              R   IL++G + G+KK   I +R++ + +
Sbjct: 274 RRTEYNKRIIKIGDDPKEINPAGGFVRYGIVRNTYILLEGSILGSKKRP-IFLREAVRPS 332

Query: 214 V 214
            
Sbjct: 333 Y 333


>gi|289191591|ref|YP_003457532.1| ribosomal protein L3 [Methanocaldococcus sp. FS406-22]
 gi|288938041|gb|ADC68796.1| ribosomal protein L3 [Methanocaldococcus sp. FS406-22]
          Length = 335

 Score = 90.6 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 20/137 (14%)

Query: 94  VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G   +    F  G+LVD  G+T GKGF G +KR         H      R  GS G  Q
Sbjct: 180 LGKQLNITDVFQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQ 239

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCV 195
            P  V  +  M G+MG ++ T  N  ++ + +                 +   +++KG V
Sbjct: 240 -PKMVMWSVPMPGQMGYHQRTEYNKRILKIGNNGDEITPKGGFLHYGVIRNNYVVLKGSV 298

Query: 196 PGAKKNSWILVRDSFKS 212
            G  K   I++R + + 
Sbjct: 299 QGPAKR-LIVLRRAIRP 314


>gi|229584895|ref|YP_002843397.1| 50S ribosomal protein L3P [Sulfolobus islandicus M.16.27]
 gi|259709736|sp|C3N5S7|RL3_SULIA RecName: Full=50S ribosomal protein L3P
 gi|228019945|gb|ACP55352.1| ribosomal protein L3 [Sulfolobus islandicus M.16.27]
          Length = 351

 Score = 90.6 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 63/301 (20%), Positives = 100/301 (33%), Gaps = 101/301 (33%)

Query: 4   GVVARKLGMTCVYNIE--------GRRI--PVTVLHL-----------------DNCQVV 36
           G V  K+GM+ V+ I+        G+ I  PVTVL +                 +   + 
Sbjct: 44  GFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVIT 103

Query: 37  -----------------------------VHRTLDKNG--------------YMAVQVGA 53
                                          +  +K G              Y  + V  
Sbjct: 104 EYWSPSSLQFLDITRRIRSFSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYFRLLVAT 163

Query: 54  GEAKVKNVSK--PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVD 110
              K+ ++ K  P            K +L       D  L  +G   S    F  GQL+D
Sbjct: 164 QPRKIPSLGKKVPDLVEIQIGGGEKKAQL-------DYALNVLGKEISIKDVFKEGQLID 216

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           V G+T GKGF+G +KR++   L   H      R     G R             G++G +
Sbjct: 217 VVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRK---IGTRGPSLGTPSYTPQPGQLGFH 273

Query: 171 RVTVKNLEVVSV--DDK--------------RG-LILVKGCVPGAKKNSWILVRDSFKSA 213
           R T  N  ++ +  D K              R   IL++G + G+KK   I +R++ + +
Sbjct: 274 RRTEYNKRIIKIGDDPKEINPAGGFVRYGIVRNTYILLEGSILGSKKRP-IFLREAVRPS 332

Query: 214 V 214
            
Sbjct: 333 Y 333


>gi|227827691|ref|YP_002829471.1| 50S ribosomal protein L3P [Sulfolobus islandicus M.14.25]
 gi|238619862|ref|YP_002914688.1| 50S ribosomal protein L3P [Sulfolobus islandicus M.16.4]
 gi|259709737|sp|C4KHF6|RL3_SULIK RecName: Full=50S ribosomal protein L3P
 gi|259709739|sp|C3MVH8|RL3_SULIM RecName: Full=50S ribosomal protein L3P
 gi|227459487|gb|ACP38173.1| ribosomal protein L3 [Sulfolobus islandicus M.14.25]
 gi|238380932|gb|ACR42020.1| ribosomal protein L3 [Sulfolobus islandicus M.16.4]
 gi|323474749|gb|ADX85355.1| ribosomal protein L3 [Sulfolobus islandicus REY15A]
 gi|323477477|gb|ADX82715.1| ribosomal protein L3 [Sulfolobus islandicus HVE10/4]
          Length = 351

 Score = 90.6 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 63/301 (20%), Positives = 100/301 (33%), Gaps = 101/301 (33%)

Query: 4   GVVARKLGMTCVYNIE--------GRRI--PVTVLHL-----------------DNCQVV 36
           G V  K+GM+ V+ I+        G+ I  PVTVL +                 +   + 
Sbjct: 44  GFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVIT 103

Query: 37  -----------------------------VHRTLDKNG--------------YMAVQVGA 53
                                          +  +K G              Y  + V  
Sbjct: 104 EYWSPSSLQFLDITRRIHSFSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYFRLLVAT 163

Query: 54  GEAKVKNVSK--PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVD 110
              K+ ++ K  P            K +L       D  L  +G   S    F  GQL+D
Sbjct: 164 QPRKIPSLGKKVPDLVEIQIGGGEKKAQL-------DYALNVLGKEISIKDVFKEGQLID 216

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           V G+T GKGF+G +KR++   L   H      R     G R             G++G +
Sbjct: 217 VVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRK---IGTRGPSLGTPSYTPQPGQLGFH 273

Query: 171 RVTVKNLEVVSV--DDK--------------RG-LILVKGCVPGAKKNSWILVRDSFKSA 213
           R T  N  ++ +  D K              R   IL++G + G+KK   I +R++ + +
Sbjct: 274 RRTEYNKRIIKIGDDPKEINPAGGFVRYGIVRNTYILLEGSILGSKKRP-IFLREAVRPS 332

Query: 214 V 214
            
Sbjct: 333 Y 333


>gi|15668348|ref|NP_247144.1| 50S ribosomal protein L3P [Methanocaldococcus jannaschii DSM 2661]
 gi|1710558|sp|P54014|RL3_METJA RecName: Full=50S ribosomal protein L3P
 gi|1590928|gb|AAB98161.1| LSU ribosomal protein L3P (rplC) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 335

 Score = 90.2 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 20/137 (14%)

Query: 94  VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G   +    F  G+LVD  G+T GKGF G +KR         H      R  GS G  Q
Sbjct: 180 LGKQLNITDVFQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQ 239

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCV 195
            P  V  +  M G+MG ++ T  N  ++ + +                 +   +++KG V
Sbjct: 240 -PKMVMWSVPMPGQMGYHQRTEYNKRILKIGNNGDEITPKGGFLHYGVIRNNYVVLKGSV 298

Query: 196 PGAKKNSWILVRDSFKS 212
            G  K   I++R + + 
Sbjct: 299 QGPAKR-LIVLRRAIRP 314


>gi|154150075|ref|YP_001403693.1| 50S ribosomal protein L3P [Candidatus Methanoregula boonei 6A8]
 gi|166233155|sp|A7I5N9|RL3_METB6 RecName: Full=50S ribosomal protein L3P
 gi|153998627|gb|ABS55050.1| ribosomal protein L3 [Methanoregula boonei 6A8]
          Length = 337

 Score = 90.2 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 50/282 (17%), Positives = 93/282 (32%), Gaps = 72/282 (25%)

Query: 4   GVVARKLGMTCVYNIE--------GR--RIPVTVLHLDNCQV--VVHRTLDKNGYMAV-- 49
           G    K+GMT V  ++        G+   +PVT++ +   +V  +   T D  G  A+  
Sbjct: 41  GFAGYKVGMTHVLMVDDHKDSPTEGKEIMVPVTIIEIPTMKVAALRVYTKDTYGKHALTE 100

Query: 50  ------------QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP---- 93
                       +V + +      +K       +  +  +     +        +P    
Sbjct: 101 IWAEPLDSQLSRRVTSPKNYDSTAAKKKYSDALAAGLVAEIYALAYTQPATMSGVPKKVP 160

Query: 94  ----------------------VGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
                                 +G     S     G   D+T +TIGKG  G +KR    
Sbjct: 161 DLMEIKVAGGDIAKQYEYAFGLLGKEIRLSNVIETGAYADITAITIGKGTQGPVKRWGVT 220

Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD------ 184
             +  H V    R  G+ G   +P  V      +G+MG  + T  N  ++ + +      
Sbjct: 221 LRKRKHSVGGKERHVGTLGPW-NPHHVRWEVPQSGQMGYQQRTEFNKRILKIGENGAEIT 279

Query: 185 -----------KRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
                      +   +++KG +PG  K   I +R + +   +
Sbjct: 280 PAGGFLNYGVIRNAYVVIKGSIPGPAKR-LIRIRPAIRQGEH 320


>gi|171185278|ref|YP_001794197.1| 50S ribosomal protein L3P [Thermoproteus neutrophilus V24Sta]
 gi|212288414|sp|B1YD88|RL3_THENV RecName: Full=50S ribosomal protein L3P
 gi|170934490|gb|ACB39751.1| ribosomal protein L3 [Thermoproteus neutrophilus V24Sta]
          Length = 338

 Score = 90.2 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/122 (35%), Positives = 56/122 (45%), Gaps = 19/122 (15%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             FT GQLVDV  +T GKG+ G +KR     L   H     HR  G+ G  Q P  +F  
Sbjct: 193 EVFTAGQLVDVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIGP-QAPALMFTQ 251

Query: 161 KKMAGRMGGNRVTVKNLEVVSVD-------DKRG----------LILVKGCVPGAKKNSW 203
            +  G+MG ++ T  N  VV +         K G           IL++G VPGAKK   
Sbjct: 252 PR-PGQMGFHQRTEYNKRVVKIGDNGAEITPKSGFLHYGVIRGPYILIQGTVPGAKKRLV 310

Query: 204 IL 205
           +L
Sbjct: 311 VL 312


>gi|209528359|ref|ZP_03276810.1| 50S ribosomal protein L3 [Arthrospira maxima CS-328]
 gi|209491212|gb|EDZ91616.1| 50S ribosomal protein L3 [Arthrospira maxima CS-328]
          Length = 79

 Score = 89.8 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 137 GVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP 196
             S +HR  GS G    PGRV+  KKMAGR GG ++T + L +V +D +R L+L+KG +P
Sbjct: 2   HGSKNHRLPGSIGPGTTPGRVYPGKKMAGRYGGKQITTRKLTIVRIDLERNLLLIKGSIP 61

Query: 197 GAKKNSWILVRDS 209
           G      + ++ +
Sbjct: 62  GKP-GGLLNIKPA 73


>gi|150401236|ref|YP_001325002.1| 50S ribosomal protein L3P [Methanococcus aeolicus Nankai-3]
 gi|166233154|sp|A6UV68|RL3_META3 RecName: Full=50S ribosomal protein L3P
 gi|150013939|gb|ABR56390.1| ribosomal protein L3 [Methanococcus aeolicus Nankai-3]
          Length = 333

 Score = 89.8 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 19/130 (14%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             FT G+ +D   +T GKGF G +KR         H      R  GS G    P R+   
Sbjct: 186 DVFTGGEFIDTVAITKGKGFQGPVKRWGIKIQFGKHQNKGVGRHTGSIGPW-TPKRIMWT 244

Query: 161 KKMAGRMGGNRVTVKNLEVVSVD-----------------DKRGLILVKGCVPGAKKNSW 203
             MAG++G ++ T  N  ++ +                   K   +LVKG V G  K   
Sbjct: 245 VPMAGQVGFHQRTEYNKRILKIGENGSEIVPKGGFLNYGVVKNNYVLVKGSVQGPAKR-M 303

Query: 204 ILVRDSFKSA 213
           +++R++ ++ 
Sbjct: 304 VVLREAIRNP 313


>gi|289597193|ref|YP_003483889.1| ribosomal protein L3 [Aciduliprofundum boonei T469]
 gi|289534980|gb|ADD09327.1| ribosomal protein L3 [Aciduliprofundum boonei T469]
          Length = 340

 Score = 89.1 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 59/271 (21%), Positives = 91/271 (33%), Gaps = 62/271 (22%)

Query: 4   GVVARKLGMTCVYNIEGRRI----------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG- 52
           G    K GMT V+ I+ R+           PVTV+ +   +V   R  ++  Y    +G 
Sbjct: 41  GFAGYKAGMTHVFTIDWRKHTTTAGQEIWTPVTVIEVPPMKVAGVRFYERTMYGLKSIGE 100

Query: 53  -------------AGEAKVKNVSKPMR---------------------GFFSSV--NVSP 76
                            K  +  K +                      G        +  
Sbjct: 101 VWDENLDKELARRFPLPKEYSKDKALERIKGDIEDIRLIVHTQPRLVSGVPKKAPDIMEI 160

Query: 77  KKKLFEFRVQKDDDLLPVGSVFSPSYFT-VGQLVDVTGMTIGKGFSGAMKRHNFGGLRAT 135
           +        +K+  L  +G     S F   G+ VDV  +T GKGF G +KR     L   
Sbjct: 161 RVGGGTIDARKEYALNLLGKEIKFSDFKSDGKFVDVIAITKGKGFQGHVKRFGVKLLNQK 220

Query: 136 HGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------DDKRGL- 188
           +      R  G+ G    P  V      AG+MG ++ T  N  +V        + ++ L 
Sbjct: 221 NRKHR--RMIGTLGPW-HPDWVRYTVPQAGQMGYHQRTEYNKRIVKYVDFIEENGEKRLA 277

Query: 189 --ILVKGCVP--GAKKNSWILVRDSFKSAVN 215
             I  KG  P  G  KN+++L+  S      
Sbjct: 278 IDITPKGGFPHYGEVKNAYVLIHGSVPGPAK 308


>gi|147919334|ref|YP_686930.1| 50S ribosomal protein L3P [uncultured methanogenic archaeon RC-I]
 gi|121685298|sp|Q0W1Y9|RL3_UNCMA RecName: Full=50S ribosomal protein L3P
 gi|110622326|emb|CAJ37604.1| 50S ribosomal protein L3P [uncultured methanogenic archaeon RC-I]
          Length = 337

 Score = 89.1 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 49/284 (17%), Positives = 88/284 (30%), Gaps = 72/284 (25%)

Query: 4   GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
           G V  K GM+ +  ++ R           +PVT++      V   R  D + Y    +G 
Sbjct: 41  GFVGFKAGMSHIVMVDDRPHSATEGMEISVPVTIVEAPQMHVAGIRVYDDSPYGKKVIGE 100

Query: 54  GEA-------------KVKNVSKPMRGFFS---SVNVSPKKKLFEFRVQKDDDLLP---- 93
                           K    +       +      V    ++    +  +   +P    
Sbjct: 101 AWISDLKMLESLTHLPKNGYKTDEQLAKIAELVKKGVVADLRVMTVTLTSEVSGIPKKVP 160

Query: 94  ----------------------VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
                                 +G        F  G+LVDV+ +T G G  G + R    
Sbjct: 161 ELMENRIAGGDMAKRFEFAKSLMGKAVGIKDVFAPGELVDVSAITKGYGTQGPVVRWGIA 220

Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK----- 185
             +  H  +   R  G+ G   +P R+       G+ G ++ T  N  ++ + DK     
Sbjct: 221 TQKRKHARTGKKRHVGNLGPW-NPHRIRWQVPQLGQTGYHQRTEYNKRILKMGDKAEEIT 279

Query: 186 ------------RGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
                          I++KG +PG  K   + +R + +     K
Sbjct: 280 PAGGFLHYGLIRNDYIMLKGSIPGPVKR-MVRIRPAVRPKNMPK 322


>gi|150399607|ref|YP_001323374.1| 50S ribosomal protein L3P [Methanococcus vannielii SB]
 gi|9910844|sp|Q9UWG2|RL3_METVA RecName: Full=50S ribosomal protein L3P
 gi|166233160|sp|A6UQJ0|RL3_METVS RecName: Full=50S ribosomal protein L3P
 gi|150012310|gb|ABR54762.1| ribosomal protein L3 [Methanococcus vannielii SB]
          Length = 334

 Score = 88.7 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 4/125 (3%)

Query: 94  VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G   S    F  G+ +D   +T GKGF G +KR         H      R  GS G  +
Sbjct: 179 LGKTLSINDVFETGEFIDTLAVTKGKGFQGPVKRWGVKIQFGKHQRKGVGRQTGSIGPWR 238

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDSF 210
            P RV     +AG+MG ++ T  N  ++ +  +   I  KG     GA KN +++V+ + 
Sbjct: 239 -PKRVMWTVPLAGQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGAVKNGYVVVKGTV 297

Query: 211 KSAVN 215
           +    
Sbjct: 298 QGPAK 302


>gi|254168629|ref|ZP_04875472.1| ribosomal protein L3 [Aciduliprofundum boonei T469]
 gi|197622463|gb|EDY35035.1| ribosomal protein L3 [Aciduliprofundum boonei T469]
          Length = 340

 Score = 88.7 bits (219), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 60/285 (21%), Positives = 93/285 (32%), Gaps = 78/285 (27%)

Query: 4   GVVARKLGMTCVYNIEGRRI----------PVTVLHLDNCQVVVHRTLDKNGY------- 46
           G    K GMT V+ I+ R+           PVTV+ +   +V   R  ++  Y       
Sbjct: 41  GFAGYKAGMTHVFTIDWRKHTTTAGQEIWTPVTVIEVPPMKVAGVRFYERTMYGLKSIGE 100

Query: 47  -----------------------MAVQVGAGEAKVKNV-----SKPMRGFFSSV--NVSP 76
                                   A++   G+ +   +      K + G        +  
Sbjct: 101 VWDENLDKELARRFPLPKEYSKDKALERIKGDIEDIRLIVHTQPKLVSGVPKKAPDIMEI 160

Query: 77  KKKLFEFRVQKDDDLLPVGSVFSPSYFT-VGQLVDVTGMTIGKGFSGAMKRHNFGGLRAT 135
           +        +K+  L  +G     S F   G+ VDV  +T GKGF G +KR     L   
Sbjct: 161 RVGGGTIDARKEYALNLLGKEIKFSDFKSDGKFVDVIAITKGKGFQGHVKRFGVKLLNQK 220

Query: 136 HGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS-VD----------- 183
           +      R  G+ G    P  V      AG+MG ++ T  N  +V  VD           
Sbjct: 221 NRKHR--RMIGTLGPW-HPDWVRYTVPQAGQMGYHQRTEYNKRIVKYVDFIEENGEKKLA 277

Query: 184 --------------DKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
                          K   +L+ G VPG  K   +  RD  +  +
Sbjct: 278 IDITPKGGFLHYGEVKNEYVLIHGSVPGPAKR-LVRFRDPVRQTL 321


>gi|330508498|ref|YP_004384926.1| 50S ribosomal protein L3 [Methanosaeta concilii GP-6]
 gi|328929306|gb|AEB69108.1| ribosomal protein L3 [Methanosaeta concilii GP-6]
          Length = 334

 Score = 88.7 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 58/281 (20%), Positives = 91/281 (32%), Gaps = 73/281 (25%)

Query: 4   GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
           G    K GMT V  I+ R            PVTVL +    VV  R  +   Y      A
Sbjct: 40  GFAGYKAGMTHVMMIDDRPRSLTEGMEISTPVTVLEVPPMNVVAVRAYES--YNGGLRPA 97

Query: 54  GEAKVKNVS----KPMRGFFSSVNVSPK------------------------------KK 79
           GE   +N+S    + M     +   +P                                +
Sbjct: 98  GELWAENLSPELSRAMTVPKKTRGTAPGDLVALGDDIADVRVLVHTNPTLVSGIPKKVPE 157

Query: 80  LFEFRVQKDD-------DLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
           + E  +               +G     S  F +G L+D + +T GKG  G ++R     
Sbjct: 158 IMEMPINGGSMNDRLSFAQTLLGQQVPISSVFELGDLMDTSAVTKGKGTQGPVRRWGIAM 217

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD------- 184
            +  H  +   R  G+ G    P  +       G+MG ++ T  N  ++ +         
Sbjct: 218 AKRKHARTGKVRHVGNLGPW-HPAHISWRVPQLGQMGYHQRTEYNKRLMFIGTDGSKITP 276

Query: 185 ----------KRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
                     K   IL+KG VPG  K   + +R + +   N
Sbjct: 277 DGGFPGYGVIKNQYILIKGSVPGPIKR-LVRMRHAMRPGKN 316


>gi|21228226|ref|NP_634148.1| 50S ribosomal protein L3P [Methanosarcina mazei Go1]
 gi|42559655|sp|Q8PV50|RL3_METMA RecName: Full=50S ribosomal protein L3P
 gi|20906682|gb|AAM31820.1| LSU ribosomal protein L3P [Methanosarcina mazei Go1]
          Length = 337

 Score = 88.3 bits (218), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 60/289 (20%), Positives = 98/289 (33%), Gaps = 80/289 (27%)

Query: 7   ARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHR--TLDKNGYMAVQ---- 50
             K+GMT V  ++  +          +PVTV+     +V   R  T D  G  A+     
Sbjct: 44  GYKVGMTHVIMVDDIKNSLTQGMEISVPVTVIETPAIRVAAVRAYTEDSTGEKAIAEAWA 103

Query: 51  -------------------------VGA----GEAKVKN-----VSKPMRGFFSS----- 71
                                    +G     G           + K + G         
Sbjct: 104 ADLDSELKRRIPIPAAGNQAEGLENIGKLIEEGRVSDIRAVTYTLPKSLTGVPKKVPDIM 163

Query: 72  -VNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129
              +S K    +F    +     +G++ +    F  G +VD   +TIGKG  G +KR   
Sbjct: 164 ESGISAKDLGAKF----EYAKSILGNLVNVTDVFKNGTVVDTAAITIGKGTQGPVKRWGI 219

Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--DDKR- 186
              +  H    S R  G+ G   +P RV       G+MG ++ T  N  ++ +  D +  
Sbjct: 220 QLQKGKHSRQGSLRQIGTLGSF-NPSRVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEEV 278

Query: 187 --------------GLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
                           +L+KG VPG  K   I +RD  ++     G+ +
Sbjct: 279 TPEGGFINYGLVRGDYVLIKGSVPGPSKR-LIRLRDPIRAKKADLGEPN 326


>gi|145592242|ref|YP_001154244.1| 50S ribosomal protein L3P [Pyrobaculum arsenaticum DSM 13514]
 gi|212288408|sp|A4WMH5|RL3_PYRAR RecName: Full=50S ribosomal protein L3P
 gi|145284010|gb|ABP51592.1| LSU ribosomal protein L3P [Pyrobaculum arsenaticum DSM 13514]
          Length = 338

 Score = 87.9 bits (217), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 4/117 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F+ GQLVDV  +T GKG+ G +KR     L   H     HR  G+ G  Q P  +F  
Sbjct: 193 DVFSPGQLVDVIAVTKGKGWQGVVKRFGVTILPRWHKHRKGHRRTGTIGP-QAPALMFTQ 251

Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDSFKSAVN 215
            +  G+MG ++ T  N  ++ + +    I  K   P  G  K  +IL++ S   A  
Sbjct: 252 PR-PGQMGFHQRTEYNKRLLKIGENGAEITPKSGFPHYGVIKGPYILIQGSLPGARK 307


>gi|167945157|ref|ZP_02532231.1| Ribosomal protein L3 [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 61

 Score = 87.5 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 23/54 (42%), Positives = 34/54 (62%)

Query: 1  MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG 54
          M  GV+ RK+GMT V+  EG  +PVTV+ +   +V   ++ D +GY A+QV  G
Sbjct: 1  MAIGVIGRKIGMTRVFTEEGASVPVTVIEVAPNRVSQLKSEDTDGYRAIQVTTG 54


>gi|282164890|ref|YP_003357275.1| 50S ribosomal protein L3P [Methanocella paludicola SANAE]
 gi|282157204|dbj|BAI62292.1| 50S ribosomal protein L3P [Methanocella paludicola SANAE]
          Length = 341

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 60/282 (21%), Positives = 96/282 (34%), Gaps = 71/282 (25%)

Query: 5   VVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMA------ 48
           +V  K GM+ V  ++ R           IPVT++      V   R  D   Y        
Sbjct: 42  LVGFKAGMSHVVMVDDRPHSTTEGMEISIPVTIIETPAMNVAGIRAYDDGPYGKHVLAEA 101

Query: 49  ---------------------VQVG--AGEAKVKNV----------SKPMRGFFSSVNVS 75
                                 Q+   AG  K   V          ++ + G    V   
Sbjct: 102 WVNDAKDLAKLFRLPKSVDTDAQLAKVAGLVKDGKVAELRLLTYVKTEEVSGIPKKVPEL 161

Query: 76  PKKKLFEFRVQKDDDLLP--VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
            + ++    + K  +     +G    P   F  G+LVDV+ +T GKG  G +KR      
Sbjct: 162 LENRVAGGSMDKRFEFAKSLLGKQVKPNDIFVPGELVDVSAITKGKGTQGPVKRWGIAIQ 221

Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK------- 185
           +  H  +   R  G+ G   +P RV       G+ G ++ T  N  ++ + +K       
Sbjct: 222 KRKHARTGKKRHVGNLGPW-NPHRVRWQVPQLGQTGYHQRTEYNKRIIKLGEKAEEVTPE 280

Query: 186 ---------RG-LILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
                    R   I+VKG +PG  K   + VR + +     K
Sbjct: 281 GGFLHYGVLRNPYIVVKGSIPGPVKR-MVRVRPAVRPKNMPK 321


>gi|15920641|ref|NP_376310.1| 50S ribosomal protein L3P [Sulfolobus tokodaii str. 7]
 gi|42559677|sp|Q975I1|RL3_SULTO RecName: Full=50S ribosomal protein L3P
 gi|15621424|dbj|BAB65419.1| 343aa long hypothetical 50S ribosomal protein L3 [Sulfolobus
           tokodaii str. 7]
          Length = 343

 Score = 86.7 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 8/126 (6%)

Query: 94  VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR- 151
           +G   S    F  GQL+D+ G+T GKGF G +KR+    L   H      R  G+ G   
Sbjct: 191 LGKPLSVKDVFKEGQLIDIIGVTKGKGFQGVVKRYGVVELPRWHKHRKGSRKVGARGPSF 250

Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDS 209
             P          G+MG +R T  N  ++ + D    I  KG     G  +N+++++  S
Sbjct: 251 STPS----YVPQPGQMGYHRRTEYNKRILKISDDPNEINPKGGFVNYGIVRNTYLIIEGS 306

Query: 210 FKSAVN 215
              A  
Sbjct: 307 IIGAKK 312


>gi|126465913|ref|YP_001041022.1| 50S ribosomal protein L3P [Staphylothermus marinus F1]
 gi|212288413|sp|A3DNA4|RL3_STAMF RecName: Full=50S ribosomal protein L3P
 gi|126014736|gb|ABN70114.1| LSU ribosomal protein L3P [Staphylothermus marinus F1]
          Length = 395

 Score = 86.7 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 50/136 (36%), Gaps = 21/136 (15%)

Query: 88  DDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146
           D     +G+  +    F  GQ +D+ G+T GKGF G +KR     L   H      R   
Sbjct: 235 DYAEKLLGNYVTVDQVFREGQFIDIIGVTKGKGFQGVIKRFGVKELPRWHKHRKGSRK-- 292

Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD-------DKRG----------LI 189
             G R             G+MG +R T  N  ++ +         K G           I
Sbjct: 293 -IGSRSPGFGTMSETPQPGQMGFHRRTEYNKRIIKIGINGWEVTPKGGFLGYGIVYGPYI 351

Query: 190 LVKGCVPGAKKNSWIL 205
           ++ G + G +K   +L
Sbjct: 352 MLHGSIIGPRKRLLVL 367


>gi|42559687|sp|Q9AIN8|RL3_CARRU RecName: Full=50S ribosomal protein L3
 gi|13310845|gb|AAK18637.1|AF250389_3 ribosomal protein L3 [Candidatus Carsonella ruddii]
          Length = 136

 Score = 86.7 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 3/90 (3%)

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           + GKGF G +KR NF     +HG S+S+R+ GSTG  QDPGRVFK KKM GRMG  +   
Sbjct: 46  SKGKGFQGVVKRWNFKTKDKSHGNSLSYRTLGSTGQCQDPGRVFKKKKMPGRMGNKK--- 102

Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWI 204
            +L V     K+    +K  +PG K +  +
Sbjct: 103 FSLFVNIFFRKKNYFFLKKILPGVKNDILL 132


>gi|29027489|gb|AAO61962.1| ribosomal protein L3 [Aster yellows phytoplasma]
          Length = 81

 Score = 86.7 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 35/58 (60%)

Query: 3  SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
          SG++ + +GMT +Y+  G  +P +++    C V+  +T +K+GY + Q+G  E K  N
Sbjct: 4  SGIIGKNIGMTSIYDESGFNVPCSIIEAGPCIVLQIKTKEKDGYNSCQLGFDEKKNTN 61


>gi|313125790|ref|YP_004036060.1| LSU ribosomal protein l3p [Halogeometricum borinquense DSM 11551]
 gi|312292155|gb|ADQ66615.1| LSU ribosomal protein L3P [Halogeometricum borinquense DSM 11551]
          Length = 338

 Score = 86.7 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 59/280 (21%), Positives = 82/280 (29%), Gaps = 73/280 (26%)

Query: 4   GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGYMA----- 48
           G    K GMT V  +              +PVTV+     + V  R  +   Y A     
Sbjct: 41  GFAGYKAGMTQVMMVNDEANSPREGMEEAVPVTVVETPPMRAVAVRAYEDTPYGAKPLTE 100

Query: 49  ------------------------------VQVGAGEAKVKNVSKPMRGFFSSVNVSPKK 78
                                           V AGE     V               K 
Sbjct: 101 VWASEFVENLDRTLDLPSEDTFEEDADDLRAAVEAGEVDDIRVITHTVPASMKNIPKKKP 160

Query: 79  KLFEFRV---------QKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
            + E RV             DL+  G   S    F  G+ +D  G+T GKG  G +KR  
Sbjct: 161 DVMETRVGGGSLQERSDFALDLVEEGGEHSMSDVFRAGEYLDAAGVTKGKGTQGPVKRWG 220

Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS------- 181
               +  H      R  G+ G   +P RV       G+ G ++ T  N  ++        
Sbjct: 221 VQKRKGKHARQGWRRRIGNLGPW-NPSRVRSTVPQLGQTGYHQRTELNKRLIDLGDGDDA 279

Query: 182 -VD--------DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
            VD              LVKG +PG  K   +  R + + 
Sbjct: 280 TVDGGFVGYGEVDGPYALVKGSLPGPDKR-LLRFRPAIRP 318


>gi|91772083|ref|YP_564775.1| 50S ribosomal protein L3P [Methanococcoides burtonii DSM 6242]
 gi|121689445|sp|Q12ZV1|RL3_METBU RecName: Full=50S ribosomal protein L3P
 gi|91711098|gb|ABE51025.1| LSU ribosomal protein L3P [Methanococcoides burtonii DSM 6242]
          Length = 337

 Score = 86.4 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 60/286 (20%), Positives = 97/286 (33%), Gaps = 72/286 (25%)

Query: 4   GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGYMAVQVG- 52
           G    K+GMT V  I+  +          +PVT++     +V   R   K+ Y  + +  
Sbjct: 41  GFAGYKVGMTHVIMIDDVKHSLTEGTEISVPVTIIETPAIRVAAIRAYGKDTYGEIAIAE 100

Query: 53  ----AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP--------------- 93
                 +  +    K  +    + ++   + L E     D  L+                
Sbjct: 101 AWTDVLDKDLSRRLKTAKNPDVNASLEKLETLVESGRANDIRLITYTLPSTLTGVPKKVP 160

Query: 94  -------VGSVFSP----------------SYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
                   GS                      F  G++VDV  +T G G  G +KR    
Sbjct: 161 DVMETGVSGSDVKAKFEYAKTVLGTMVEISDVFDNGKIVDVAAITTGHGTQGPVKRWGIN 220

Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS----VDDKR 186
            ++  H    S R  G+ G    P  V      AG+MG ++ T  N  ++     VD+  
Sbjct: 221 LMKNKHSRQGSLRQVGTLGPW-TPAHVSWRVPQAGQMGYHQRTDYNKRILKMSSDVDEVN 279

Query: 187 -------------GLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
                          IL+KG VPG  K   I +R+  +S V+  G+
Sbjct: 280 PAGGFVNYGLVRGNYILIKGSVPGPSKR-LIRLREPTRSKVSSIGE 324


>gi|302348734|ref|YP_003816372.1| 50S ribosomal protein L3P [Acidilobus saccharovorans 345-15]
 gi|302329146|gb|ADL19341.1| 50S ribosomal protein L3P [Acidilobus saccharovorans 345-15]
          Length = 329

 Score = 86.4 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 53/274 (19%), Positives = 85/274 (31%), Gaps = 75/274 (27%)

Query: 4   GVVARKLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHR---TLDKNGYMAV- 49
           G +  K GMT  + ++        G+ +  P+TVL      V+  R     +  G   V 
Sbjct: 28  GFIGYKAGMTHAFIVDNRQGSPTFGKEVFRPITVLEAPPIFVLAVRGYGYDENRGLYTVG 87

Query: 50  -----------------QVGA--------------GEAKVKNV-----SKPMRGFFSSV- 72
                             +GA               + K   V      K   G      
Sbjct: 88  EAWARPPLDLELERRISAIGAFDTQSMLKKLEASLSDIKEVRVLVATQPKLTGGLSKKSP 147

Query: 73  ---NVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
               V       + +   D     +G   S    F  G +VDV  +T GKGF G +KR  
Sbjct: 148 DLLEVKVASPGSDVKAAFDYATSILGKTLSVGEVFQPGLMVDVIAVTKGKGFQGDVKRFG 207

Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------ 182
              L   H      R     G R      +      G++G +R T  N  ++ +      
Sbjct: 208 VKVLPRWHKHRKKAR---GIGARSHGKGTWWEIPNPGQLGFHRRTEYNKRILDITDDWAA 264

Query: 183 -----------DDKRGLILVKGCVPGAKKNSWIL 205
                        +  L++++G +PGA K   ++
Sbjct: 265 YTPAGGFLHYGIPRSTLVVLEGTIPGAVKRPIVM 298


>gi|222480857|ref|YP_002567094.1| ribosomal protein L3 [Halorubrum lacusprofundi ATCC 49239]
 gi|222453759|gb|ACM58024.1| ribosomal protein L3 [Halorubrum lacusprofundi ATCC 49239]
          Length = 338

 Score = 85.2 bits (210), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 56/288 (19%), Positives = 81/288 (28%), Gaps = 89/288 (30%)

Query: 4   GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
           G    K GMT V  +              +PVTV+       V  R  ++  Y     G 
Sbjct: 41  GFAGYKAGMTHVVMVNDEANSPREGMETSVPVTVVETPPMYAVALRAYEQTPY-----GK 95

Query: 54  GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP------------- 100
              +    +             P +  FE    +   LL  G+V                
Sbjct: 96  KPVEEVWAT-EFHEELDRALDLPAEDTFEEDADELRALLDEGAVDDVRVITHTVPSELAN 154

Query: 101 --------------------------------------SYFTVGQLVDVTGMTIGKGFSG 122
                                                   F  GQ  DV+G+T GKG  G
Sbjct: 155 VPKKKPDVMETRVGGGSLEERVDFGLDLVAEGGAHEFGDVFRAGQYTDVSGITKGKGTQG 214

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS- 181
            +KR      +  H      R  G+ G   +P RV       G+ G ++ T  N  ++  
Sbjct: 215 PVKRWGVQKRKGKHARQGWRRRIGNLGPW-NPSRVRSTVPQQGQTGYHQRTELNKRLIDF 273

Query: 182 -----------------VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
                            VD +  LI  KG +PG  K   I  R + + 
Sbjct: 274 GEGDDASVDGGFVNYGEVDGEYALI--KGSLPGPDKR-LIRFRPAIRP 318


>gi|291533622|emb|CBL06735.1| hypothetical protein MHY_20500 [Megamonas hypermegale ART12/1]
          Length = 60

 Score = 84.4 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 23/59 (38%), Positives = 37/59 (62%)

Query: 1  MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
          M   ++ +KLGMT ++  EG+ +PVTV+      V+  +T++ +GY AVQ+G G  K K
Sbjct: 1  MAKVILGKKLGMTQIFTEEGKVVPVTVVESGKNVVLQSKTVETDGYNAVQIGFGTVKEK 59


>gi|300710375|ref|YP_003736189.1| 50S ribosomal protein L3P [Halalkalicoccus jeotgali B3]
 gi|299124058|gb|ADJ14397.1| 50S ribosomal protein L3P [Halalkalicoccus jeotgali B3]
          Length = 337

 Score = 83.7 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 18/136 (13%)

Query: 93  PVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
             G   +   F  G+ +DV+G+T GKG  G +KR      +  H      R  G+ G   
Sbjct: 184 EGGEHEATDVFRAGEYLDVSGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW- 242

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVV------SVDDKRGLI----------LVKGCVP 196
           +P RV       G+ G ++ T  N  ++       V+   GL+          L+KG +P
Sbjct: 243 NPSRVRSTVPQQGQTGYHQRTELNKRLLALGEEDDVNPDGGLVNYGEVSGPYTLIKGSLP 302

Query: 197 GAKKNSWILVRDSFKS 212
           G  K   +  R + + 
Sbjct: 303 GPDKR-VLRFRPAIRP 317


>gi|307595041|ref|YP_003901358.1| 50S ribosomal protein L3 [Vulcanisaeta distributa DSM 14429]
 gi|307550242|gb|ADN50307.1| ribosomal protein L3 [Vulcanisaeta distributa DSM 14429]
          Length = 342

 Score = 83.3 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 20/129 (15%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F+ GQ VDV  +T GKG+ G +KR N   L   H     +R  G+ G  Q+P   F  
Sbjct: 194 DVFSEGQYVDVAAITKGKGWQGVVKRFNVKILPKWHKHRKGYRRIGAIGP-QNPALTFTT 252

Query: 161 KKMAGRMGGNRVTVKNLEVVSVD------------DKRGL-----ILVKGCVPGAKKNSW 203
            +  G+MG ++ T  N  ++ +                G+     I+++G VPG  K   
Sbjct: 253 PR-PGQMGLHKRTEYNKRILRIGMNGAEVTPSSGFPHYGIIKGPYIVLEGTVPGVVKR-L 310

Query: 204 ILVRDSFKS 212
           + +R   + 
Sbjct: 311 VTLRFPVRP 319


>gi|76803057|ref|YP_331152.1| 50S ribosomal protein L3P [Natronomonas pharaonis DSM 2160]
 gi|109893528|sp|Q3IMY8|RL3_NATPD RecName: Full=50S ribosomal protein L3P
 gi|76558922|emb|CAI50518.1| ribosomal protein L3 [Natronomonas pharaonis DSM 2160]
          Length = 336

 Score = 83.3 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/145 (26%), Positives = 55/145 (37%), Gaps = 18/145 (12%)

Query: 85  VQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHR 143
           V    DL+  G   +    F  G+  DV G+T GKG  G +KR      +  H      R
Sbjct: 175 VDFALDLVDDGGEHTVTDVFRAGEYTDVAGITKGKGTQGPVKRWGVQKRKGKHARQGWRR 234

Query: 144 SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV-----SVDDKRGLI--------- 189
             G+ G   +P RV       G+ G ++ T  N  ++      V    G +         
Sbjct: 235 RIGNLGPW-NPSRVRSTVPQQGQTGYHQRTELNKRLIDLGDDDVSPDGGFVNYGEVDGPY 293

Query: 190 -LVKGCVPGAKKNSWILVRDSFKSA 213
            LVKG VPG  K   +  R + +  
Sbjct: 294 ALVKGSVPGPDKR-LVRFRPAVRPG 317


>gi|159463060|ref|XP_001689760.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158283748|gb|EDP09498.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 264

 Score = 83.3 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 21/160 (13%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           V  G     + S    G F S    P+   ++  V +  + L +GS  S + + VG +  
Sbjct: 51  VCQGWRASFSPSPIELGCFPSSPRRPEA-WYDLGVLEMYEYLGIGSGLSITDY-VGHIKH 108

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
            +  + G   +G +KR +      THG S SHR HGS G    P RV+   KMAG+    
Sbjct: 109 RSLHSRGP--AGTIKRWHHKRGAMTHG-SKSHREHGSIGSATTPSRVYPGLKMAGQ---- 161

Query: 171 RVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
                      VD +R  ++VKG VPG   N  + +  + 
Sbjct: 162 -----------VDTERRALVVKGSVPGKVGN-VVEIVPAK 189


>gi|305662572|ref|YP_003858860.1| LSU ribosomal protein L3P [Ignisphaera aggregans DSM 17230]
 gi|304377141|gb|ADM26980.1| LSU ribosomal protein L3P [Ignisphaera aggregans DSM 17230]
          Length = 340

 Score = 83.3 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 5/110 (4%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F VGQ +D+ G+T GKGF G +KR     L   H      R     G R          
Sbjct: 196 VFNVGQFIDIIGVTKGKGFQGVIKRFGVKELPRWHKHRKGSRR---IGSRSPTIGAMSET 252

Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDS 209
             AG+MG +R T  N  ++++ DK   I   G  P  G  K+ WI+V+ S
Sbjct: 253 PQAGQMGFHRRTEYNKRILAMGDKGEEITPSGGFPHYGIVKSMWIMVQGS 302


>gi|325969277|ref|YP_004245469.1| 50S ribosomal protein L3P [Vulcanisaeta moutnovskia 768-28]
 gi|323708480|gb|ADY01967.1| 50S ribosomal protein L3P [Vulcanisaeta moutnovskia 768-28]
          Length = 342

 Score = 82.9 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/137 (25%), Positives = 55/137 (40%), Gaps = 21/137 (15%)

Query: 94  VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G   +    F  GQ VDV  +T GKG  G +KR N   L   H     +R  G+ G  Q
Sbjct: 186 LGKDINVTDVFNEGQYVDVAAITKGKGLQGVVKRFNVKILPKWHKHRKGYRRIGAIGP-Q 244

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-----------------DDKRGLILVKGCV 195
           +P   F   +  G+MG ++ T  N  ++ +                   K   + ++G V
Sbjct: 245 NPALAFTTPR-PGQMGLHKRTEYNKRILKIGLNGAEVTPSSGFPHYGIVKGPYMALEGSV 303

Query: 196 PGAKKNSWILVRDSFKS 212
           PG  K   + +R   + 
Sbjct: 304 PGIVKR-LVTLRFPVRP 319


>gi|15897623|ref|NP_342228.1| 50S ribosomal protein L3P [Sulfolobus solfataricus P2]
 gi|284174948|ref|ZP_06388917.1| 50S ribosomal protein L3P [Sulfolobus solfataricus 98/2]
 gi|9910845|sp|Q9UXA8|RL3_SULSO RecName: Full=50S ribosomal protein L3P
 gi|6015757|emb|CAB57584.1| ribosomal protein L3 (HMAL3) [Sulfolobus solfataricus P2]
 gi|13813888|gb|AAK41018.1| LSU ribosomal protein L3AB (rpl3AB) [Sulfolobus solfataricus P2]
 gi|261602391|gb|ACX91994.1| ribosomal protein L3 [Sulfolobus solfataricus 98/2]
          Length = 351

 Score = 82.9 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 22/145 (15%)

Query: 88  DDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146
           D  L  +G   +    F  GQL+DV G+T GKGF+G +KR++   L   H      R   
Sbjct: 193 DYALNILGKEITIRDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRK-- 250

Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK----------------RG-LI 189
             G R             G++G +R T  N  ++ + D+                R   +
Sbjct: 251 -IGTRGPSLGTPSYTPQPGQLGFHRRTEYNKRIIKIGDEPKEINPAGGFVRYGIVRNTYV 309

Query: 190 LVKGCVPGAKKNSWILVRDSFKSAV 214
           L++G + G+KK   I +R+  + + 
Sbjct: 310 LLEGSILGSKKRP-IFLREPVRPSY 333



 Score = 40.5 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 10/53 (18%)

Query: 4  GVVARKLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHRTLDKNGY 46
          G V  K+GMT V+ I+        G+ I  PVTVL +     +  R    +G 
Sbjct: 44 GFVGYKVGMTHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAIDGK 96


>gi|320101368|ref|YP_004176960.1| 50S ribosomal protein L3P [Desulfurococcus mucosus DSM 2162]
 gi|319753720|gb|ADV65478.1| LSU ribosomal protein L3P [Desulfurococcus mucosus DSM 2162]
          Length = 396

 Score = 82.9 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 51/134 (38%), Gaps = 22/134 (16%)

Query: 90  DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTG 149
           + +  G V +   F  GQ +DV G+T GKGF G +KR     L   H      R     G
Sbjct: 238 ESILGGYVKAADVFMEGQFIDVIGVTKGKGFQGVVKRFGVKELPRWHKHRKGSRK---IG 294

Query: 150 CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL------------------ILV 191
            R            AG+MG +R T  N  ++ +    GL                  +++
Sbjct: 295 ARSPGFGTMSEPPQAGQMGFHRRTEYNKRILRIGL-NGLEATVEGGFLHYGLVYGPYLML 353

Query: 192 KGCVPGAKKNSWIL 205
           KG V G  K   IL
Sbjct: 354 KGTVFGPAKRMLIL 367


>gi|70606412|ref|YP_255282.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius DSM 639]
 gi|76363364|sp|Q4JB40|RL3_SULAC RecName: Full=50S ribosomal protein L3P
 gi|68567060|gb|AAY79989.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius DSM 639]
          Length = 342

 Score = 82.5 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 6/125 (4%)

Query: 94  VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G        F  GQL D+ G+T GKGF G +KR++       H      R     G R 
Sbjct: 190 LGKQIPVRDVFREGQLTDIIGVTKGKGFQGVIKRYSVVEFPRWHKHRKGSRK---IGARG 246

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDSF 210
                       G++G +R T  N  ++ + D    I   G +   G  KN+++++  S 
Sbjct: 247 PSISTPSYVPQPGQLGFHRRTEYNKRIIKIGDNVNEINPAGGIVNYGLVKNTYLVIEGSV 306

Query: 211 KSAVN 215
             +  
Sbjct: 307 LGSRK 311


>gi|322372168|ref|ZP_08046709.1| 50S ribosomal protein L3P [Haladaptatus paucihalophilus DX253]
 gi|320548177|gb|EFW89850.1| 50S ribosomal protein L3P [Haladaptatus paucihalophilus DX253]
          Length = 338

 Score = 82.1 bits (202), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 86/280 (30%), Gaps = 73/280 (26%)

Query: 4   GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHR-------------- 39
           G    K GMT V  +              +PVT++     + V  R              
Sbjct: 41  GFAGYKAGMTHVVMVNDEANSPREGMEETVPVTIVETPPMRAVALRAYEDTPYGKKPMTE 100

Query: 40  ---------------TLDKNGYMAV------QVGAGEAKVKNVSKPMRGFFSSVNVSPKK 78
                            + +   A        + AG+     V               + 
Sbjct: 101 VWGSEFHDELDRTLNVPENHDADAAEDELRAAIEAGDVADLRVITHTVPSDLKNVPKKRP 160

Query: 79  KLFEFRV---------QKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
            + E RV             +LL  G        F  G+ +D +G+T GKG  G +KR  
Sbjct: 161 DVMETRVGGGSISDRADFALELLEDGGEHDITDVFRAGEYLDTSGVTKGKGTQGPVKRWG 220

Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--DDKR 186
               +  H      R  G+ G   +P RV       G+ G ++ T  N  ++S+  DD+ 
Sbjct: 221 VQKRKGKHARQGWRRRIGNLGPW-NPSRVRSTVPQLGQTGYHQRTELNKRLISLGDDDEA 279

Query: 187 GL--------------ILVKGCVPGAKKNSWILVRDSFKS 212
            +               L+KG VPG  K   +  R + + 
Sbjct: 280 SVDGGFVNYGEVDGPYALIKGSVPGPNKR-LVRFRPAVRP 318


>gi|255513436|gb|EET89702.1| ribosomal protein L3 [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 322

 Score = 82.1 bits (202), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 24/143 (16%)

Query: 88  DDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146
           D     VG        F  G+ +DV  +T GKG++G +KRH    L   H  +   R  G
Sbjct: 165 DFAAQLVGKEVKPADVFKGGEFIDVVSVTKGKGWAGVIKRHGVRRLD--HKATQKIRHIG 222

Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV---------SVDDKRGL--------- 188
           + G    PG++       G++G N  T  N  ++          V+ K G+         
Sbjct: 223 ALGAF-TPGKIMYTVPRPGQLGFNYRTEHNKRILVLGAASDTEKVNIKSGIKNYGLVKSD 281

Query: 189 -ILVKGCVPGAKKNSWILVRDSF 210
            IL++G VPG  K   + ++ S 
Sbjct: 282 YILIEGSVPGPAKR-IVRLKKSV 303


>gi|257053359|ref|YP_003131192.1| 50S ribosomal protein L3P [Halorhabdus utahensis DSM 12940]
 gi|256692122|gb|ACV12459.1| ribosomal protein L3 [Halorhabdus utahensis DSM 12940]
          Length = 338

 Score = 81.7 bits (201), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 49/128 (38%), Gaps = 18/128 (14%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F  G+  DV G+T GKG  G +KR      +  H      R  G+ G   +P RV   
Sbjct: 193 DVFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW-NPSRVRST 251

Query: 161 KKMAGRMGGNRVTVKNLEVVSV----------------DDKRGLILVKGCVPGAKKNSWI 204
               G+ G ++ T  N  ++                  + +    L+KG +PG   +  +
Sbjct: 252 VPQQGQTGYHQRTELNKRLIDFGDEDDVTPDGGFVNYGEVEGNYALIKGSIPGPD-SRLV 310

Query: 205 LVRDSFKS 212
            +R + + 
Sbjct: 311 RLRPAVRP 318


>gi|126178514|ref|YP_001046479.1| 50S ribosomal protein L3P [Methanoculleus marisnigri JR1]
 gi|166233158|sp|A3CSZ7|RL3_METMJ RecName: Full=50S ribosomal protein L3P
 gi|125861308|gb|ABN56497.1| LSU ribosomal protein L3P [Methanoculleus marisnigri JR1]
          Length = 337

 Score = 81.4 bits (200), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 53/141 (37%), Gaps = 20/141 (14%)

Query: 94  VGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G   + S    VG+ VDVT +T GKG  G +KR      +  H      R  G+ G   
Sbjct: 183 LGKEITISGNLEVGEYVDVTAVTTGKGTEGPVKRWGVQVRKRKHSRGGKKRHIGNLGPW- 241

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLI-----------------LVKGCV 195
            P  V       G+MG  + T  N  ++ +      I                 L+KG V
Sbjct: 242 HPHHVRWQVPQMGQMGYQQRTEFNKRILKIGADGDEITPAGGFLHYGLVRGPYVLIKGSV 301

Query: 196 PGAKKNSWILVRDSFKSAVNC 216
           PG  K   + +R + +   + 
Sbjct: 302 PGPNKR-LVRIRSAIRQGEHT 321


>gi|293372119|ref|ZP_06618510.1| 50S ribosomal protein L3 domain protein [Bacteroides ovatus SD
          CMC 3f]
 gi|292632911|gb|EFF51498.1| 50S ribosomal protein L3 domain protein [Bacteroides ovatus SD
          CMC 3f]
          Length = 53

 Score = 81.0 bits (199), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 30/48 (62%)

Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
          MT V++ +G+ +P TV+    C V   +T++K+GY AVQ+G  + K  
Sbjct: 1  MTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEN 48


>gi|297527410|ref|YP_003669434.1| ribosomal protein L3 [Staphylothermus hellenicus DSM 12710]
 gi|297256326|gb|ADI32535.1| ribosomal protein L3 [Staphylothermus hellenicus DSM 12710]
          Length = 395

 Score = 81.0 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 47/130 (36%), Gaps = 21/130 (16%)

Query: 94  VGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G+  +    F  GQ +D+ G+T GKGF G +KR     L   H      R     G R 
Sbjct: 241 LGNYITVDQVFREGQFIDIIGVTKGKGFQGVIKRFGVKELPRWHKHRKGSRK---IGSRS 297

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK------------RGL-----ILVKGCV 195
                       G+ G +R T  N  ++ +                G+     I+V G  
Sbjct: 298 PGFGTMSETPQPGQTGFHRRTEYNKRIIKIGVNGWEITPKGGFLGYGIVYGPYIMVYGST 357

Query: 196 PGAKKNSWIL 205
            G +K   +L
Sbjct: 358 IGPRKRLLVL 367


>gi|292656685|ref|YP_003536582.1| 50S ribosomal protein L3 [Haloferax volcanii DS2]
 gi|291372463|gb|ADE04690.1| ribosomal protein L3 [Haloferax volcanii DS2]
          Length = 338

 Score = 81.0 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 52/280 (18%), Positives = 82/280 (29%), Gaps = 73/280 (26%)

Query: 4   GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGY------- 46
           G    K GMT V  +              +PVTV+     + V  R  ++  Y       
Sbjct: 41  GFAGYKAGMTHVMMVNDEADSPHEGMEESVPVTVVETPPMRAVALRAYEQTPYGMKPQTE 100

Query: 47  --------------------------MAV--QVGAGEAKVKNV----------SKPMRGF 68
                                      A+   V AGE     V          + P +  
Sbjct: 101 VWAGEFHDELDRVLDLPAEDTFDSDADALREAVEAGEVDDLRVITHTVPSELANVPKKKP 160

Query: 69  FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
                      + E      D +   G       F  G+ +D  G+T GKG  G +KR  
Sbjct: 161 DVMETRVGGGSMVERADFALDLVAEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWG 220

Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------ 182
               +  H      R  G+ G   +P RV       G+ G ++ T  N  ++ +      
Sbjct: 221 VQKRKGKHARQGWRRRIGNLGPW-NPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGDDA 279

Query: 183 ----------DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
                     +      L+KG +PG  K   +  R + + 
Sbjct: 280 SVEGGFVNYGEVDGSYALIKGSLPGPNKR-LLRFRPAIRP 318


>gi|260891595|ref|ZP_05902858.1| hypothetical protein GCWU000323_02810 [Leptotrichia hofstadii
          F0254]
 gi|260858703|gb|EEX73203.1| ribosomal protein L3 [Leptotrichia hofstadii F0254]
          Length = 61

 Score = 80.6 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)

Query: 5  VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
          ++ +K+GMT ++  + + IPVTV+      +   +T +K GY A+ +  G+ K K
Sbjct: 2  ILGKKIGMTQIF-EDEKLIPVTVIEAGTNFITQIKTEEKEGYNAITLAYGDKKEK 55


>gi|14278035|pdb|1GIY|E Chain E, Crystal Structure Of The Ribosome At 5.5 A Resolution.
           This File, 1giy, Contains The 50s Ribosome Subunit. The
           30s Ribosome Subunit, Three Trna, And Mrna Molecules Are
           In The File 1gix
 gi|28373724|pdb|1ML5|EE Chain e, Structure Of The E. Coli Ribosomal Termination Complex
           With Release Factor 2
 gi|66361021|pdb|1YL3|E Chain E, Crystal Structure Of 70s Ribosome With Thrs Operator And
           Trnas. Large Subunit. The Coordinates For The Small
           Subunit Are In The Pdb Entry 1yl4.
 gi|88192261|pdb|2B66|E Chain E, 50s Ribosomal Subunit From A Crystal Structure Of Release
           Factor Rf1, Trnas And Mrna Bound To The Ribosome. This
           File Contains The 50s Subunit From A Crystal Structure
           Of Release Factor Rf1, Trnas And Mrna Bound To The
           Ribosome And Is Described In Remark 400
 gi|88192324|pdb|2B9N|E Chain E, 50s Ribosomal Subunit From A Crystal Structure Of Release
           Factor Rf2, Trnas And Mrna Bound To The Ribosome. This
           File Contains The 50s Subunit From A Crystal Structure
           Of Release Factor Rf1, Trnas And Mrna Bound To The
           Ribosome And Is Described In Remark 400.
 gi|88192379|pdb|2B9P|E Chain E, 50s Ribosomal Subunit From A Crystal Structure Of The
           Ribosome In Complex With Trnas And Mrna With A Stop
           Codon In The A-Site. This File Contains The 50s Subunit
           From A Crystal Structure Of The Ribosome In Complex With
           Trnas And Mrna With A Stop Codon In The A-Site And Is
           Described In Remark 400
          Length = 338

 Score = 80.6 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 47/128 (36%), Gaps = 17/128 (13%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F  G+  DV G+T GKG  G +KR      +  H      R  G+ G   +P RV   
Sbjct: 192 DIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW-NPSRVRST 250

Query: 161 KKMAGRMGGNRVTVKNLEVVSV----------------DDKRGLILVKGCVPGAKKNSWI 204
               G+ G ++ T  N  ++ +                +      LVKG VPG  K    
Sbjct: 251 VPQQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKRLVP 310

Query: 205 LVRDSFKS 212
             R + + 
Sbjct: 311 FFRPAVRP 318


>gi|15825944|pdb|1JJ2|B Chain B, Fully Refined Crystal Structure Of The Haloarcula
           Marismortui Large Ribosomal Subunit At 2.4 Angstrom
           Resolution
 gi|20150989|pdb|1KQS|B Chain B, The Haloarcula Marismortui 50s Complexed With A
           Pretranslocational Intermediate In Protein Synthesis
 gi|22218923|pdb|1K8A|D Chain D, Co-Crystal Structure Of Carbomycin A Bound To The 50s
           Ribosomal Subunit Of Haloarcula Marismortui
 gi|22218957|pdb|1K9M|D Chain D, Co-Crystal Structure Of Tylosin Bound To The 50s Ribosomal
           Subunit Of Haloarcula Marismortui
 gi|22219000|pdb|1KD1|D Chain D, Co-Crystal Structure Of Spiramycin Bound To The 50s
           Ribosomal Subunit Of Haloarcula Marismortui
 gi|22219327|pdb|1M1K|D Chain D, Co-Crystal Structure Of Azithromycin Bound To The 50s
           Ribosomal Subunit Of Haloarcula Marismortui
 gi|24159022|pdb|1M90|D Chain D, Co-Crystal Structure Of Cca-Phe-Caproic Acid-Biotin And
           Sparsomycin Bound To The 50s Ribosomal Subunit
 gi|34811119|pdb|1K73|D Chain D, Co-Crystal Structure Of Anisomycin Bound To The 50s
           Ribosomal Subunit
 gi|34811149|pdb|1KC8|D Chain D, Co-Crystal Structure Of Blasticidin S Bound To The 50s
           Ribosomal Subunit
 gi|34811188|pdb|1N8R|D Chain D, Structure Of Large Ribosomal Subunit In Complex With
           Virginiamycin M
 gi|34811218|pdb|1NJI|D Chain D, Structure Of Chloramphenicol Bound To The 50s Ribosomal
           Subunit
 gi|37927902|pdb|1Q7Y|D Chain D, Crystal Structure Of Ccdap-Puromycin Bound At The Peptidyl
           Transferase Center Of The 50s Ribosomal Subunit
 gi|37927937|pdb|1Q81|D Chain D, Crystal Structure Of Minihelix With 3' Puromycin Bound To
           A- Site Of The 50s Ribosomal Subunit.
 gi|37927973|pdb|1Q82|D Chain D, Crystal Structure Of Cc-Puromycin Bound To The A-Site Of
           The 50s Ribosomal Subunit
 gi|37928009|pdb|1Q86|D Chain D, Crystal Structure Of Cca-Phe-Cap-Biotin Bound
           Simultaneously At Half Occupancy To Both The A-Site And
           P- Site Of The The 50s Ribosomal Subunit.
 gi|39654674|pdb|1QVF|B Chain B, Structure Of A Deacylated Trna Minihelix Bound To The E
           Site Of The Large Ribosomal Subunit Of Haloarcula
           Marismortui
 gi|39654707|pdb|1QVG|B Chain B, Structure Of Cca Oligonucleotide Bound To The Trna Binding
           Sites Of The Large Ribosomal Subunit Of Haloarcula
           Marismortui
 gi|55670537|pdb|1W2B|B Chain B, Trigger Factor Ribosome Binding Domain In Complex With 50s
 gi|145580205|pdb|2OTL|B Chain B, Girodazole Bound To The Large Subunit Of Haloarcula
           Marismortui
 gi|228311913|pdb|3CXC|B Chain B, The Structure Of An Enhanced Oxazolidinone Inhibitor Bound
           To The 50s Ribosomal Subunit Of H. Marismortui
 gi|228312143|pdb|3G4S|B Chain B, Co-Crystal Structure Of Tiamulin Bound To The Large
           Ribosomal Subunit
 gi|228312199|pdb|3G6E|B Chain B, Co-Crystal Structure Of Homoharringtonine Bound To The
           Large Ribosomal Subunit
 gi|228312235|pdb|3G71|B Chain B, Co-Crystal Structure Of Bruceantin Bound To The Large
           Ribosomal Subunit
          Length = 337

 Score = 80.6 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 48/128 (37%), Gaps = 18/128 (14%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F  G+  DV G+T GKG  G +KR      +  H      R  G+ G   +P RV   
Sbjct: 192 DIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW-NPSRVRST 250

Query: 161 KKMAGRMGGNRVTVKNLEVVSV----------------DDKRGLILVKGCVPGAKKNSWI 204
               G+ G ++ T  N  ++ +                +      LVKG VPG  K   +
Sbjct: 251 VPQQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKR-LV 309

Query: 205 LVRDSFKS 212
             R + + 
Sbjct: 310 RFRPAVRP 317


>gi|27066406|pdb|1FFK|B Chain B, Crystal Structure Of The Large Ribosomal Subunit From
           Haloarcula Marismortui At 2.4 Angstrom Resolution
          Length = 337

 Score = 80.6 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 47/128 (36%), Gaps = 17/128 (13%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F  G+  DV G+T GKG  G +KR      +  H      R  G+ G   +P RV   
Sbjct: 191 DIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW-NPSRVRST 249

Query: 161 KKMAGRMGGNRVTVKNLEVVSV----------------DDKRGLILVKGCVPGAKKNSWI 204
               G+ G ++ T  N  ++ +                +      LVKG VPG  K    
Sbjct: 250 VPQQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKRLVP 309

Query: 205 LVRDSFKS 212
             R + + 
Sbjct: 310 FFRPAVRP 317


>gi|55378384|ref|YP_136234.1| 50S ribosomal protein L3P [Haloarcula marismortui ATCC 43049]
 gi|57015335|sp|P20279|RL3_HALMA RecName: Full=50S ribosomal protein L3P; AltName: Full=Hl1;
           AltName: Full=Hmal3
 gi|50513471|pdb|1S72|B Chain B, Refined Crystal Structure Of The Haloarcula Marismortui
           Large Ribosomal Subunit At 2.4 Angstrom Resolution
 gi|66360785|pdb|1YHQ|B Chain B, Crystal Structure Of Azithromycin Bound To The G2099a
           Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
 gi|66360818|pdb|1YI2|B Chain B, Crystal Structure Of Erythromycin Bound To The G2099a
           Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
 gi|66360851|pdb|1YIJ|B Chain B, Crystal Structure Of Telithromycin Bound To The G2099a
           Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
 gi|66360884|pdb|1YIT|B Chain B, Crystal Structure Of Virginiamycin M And S Bound To The
           50s Ribosomal Subunit Of Haloarcula Marismortui
 gi|66360917|pdb|1YJ9|B Chain B, Crystal Structure Of The Mutant 50s Ribosomal Subunit Of
           Haloarcula Marismortui Containing A Three Residue
           Deletion In L22
 gi|66360950|pdb|1YJN|B Chain B, Crystal Structure Of Clindamycin Bound To The G2099a
           Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
 gi|66360983|pdb|1YJW|B Chain B, Crystal Structure Of Quinupristin Bound To The G2099a
           Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
 gi|83753127|pdb|1VQ4|B Chain B, The Structure Of The Transition State Analogue "daa" Bound
           To The Large Ribosomal Subunit Of Haloarcula Marismortui
 gi|83753159|pdb|1VQ5|B Chain B, The Structure Of The Transition State Analogue "raa" Bound
           To The Large Ribosomal Subunit Of Haloarcula Marismortui
 gi|83753191|pdb|1VQ6|B Chain B, The Structure Of C-Hpmn And Cca-Phe-Cap-Bio Bound To The
           Large Ribosomal Subunit Of Haloarcula Marismortui
 gi|83753223|pdb|1VQ7|B Chain B, The Structure Of The Transition State Analogue "dca" Bound
           To The Large Ribosomal Subunit Of Haloarcula Marismortui
 gi|83753254|pdb|1VQ8|B Chain B, The Structure Of Ccda-Phe-Cap-Bio And The Antibiotic
           Sparsomycin Bound To The Large Ribosomal Subunit Of
           Haloarcula Marismortui
 gi|83753286|pdb|1VQ9|B Chain B, The Structure Of Cca-Phe-Cap-Bio And The Antibiotic
           Sparsomycin Bound To The Large Ribosomal Subunit Of
           Haloarcula Marismortui
 gi|83753317|pdb|1VQK|B Chain B, The Structure Of Ccda-Phe-Cap-Bio Bound To The A Site Of
           The Ribosomal Subunit Of Haloarcula Marismortui
 gi|83753348|pdb|1VQL|B Chain B, The Structure Of The Transition State Analogue "dcsn"
           Bound To The Large Ribosomal Subunit Of Haloarcula
           Marismortui
 gi|83753379|pdb|1VQM|B Chain B, The Structure Of The Transition State Analogue "dan" Bound
           To The Large Ribosomal Subunit Of Haloarcula Marismortui
 gi|83753411|pdb|1VQN|B Chain B, The Structure Of Cc-Hpmn And Cca-Phe-Cap-Bio Bound To The
           Large Ribosomal Subunit Of Haloarcula Marismortui
 gi|83753442|pdb|1VQO|B Chain B, The Structure Of Ccpmn Bound To The Large Ribosomal
           Subunit Haloarcula Marismortui
 gi|83753474|pdb|1VQP|B Chain B, The Structure Of The Transition State Analogue "rap" Bound
           To The Large Ribosomal Subunit Of Haloarcula Marismortui
 gi|145580174|pdb|2OTJ|B Chain B, 13-Deoxytedanolide Bound To The Large Subunit Of
           Haloarcula Marismortui
 gi|171848838|pdb|2QA4|B Chain B, A More Complete Structure Of The The L7L12 STALK OF THE
           Haloarcula Marismortui 50s Large Ribosomal Subunit
 gi|188596003|pdb|3CC2|B Chain B, The Refined Crystal Structure Of The Haloarcula
           Marismortui Large Ribosomal Subunit At 2.4 Angstrom
           Resolution With Rrna Sequence For The 23s Rrna And
           Genome-Derived Sequences For R-Proteins
 gi|188596034|pdb|3CC4|B Chain B, Co-Crystal Structure Of Anisomycin Bound To The 50s
           Ribosomal Subunit
 gi|188596065|pdb|3CC7|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation C2487u
 gi|188596096|pdb|3CCE|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation U2535a
 gi|188596127|pdb|3CCJ|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation C2534u
 gi|188596158|pdb|3CCL|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation U2535c. Density For Anisomycin Is
           Visible But Not Included In Model.
 gi|188596189|pdb|3CCM|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation G2611u
 gi|188596220|pdb|3CCQ|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation A2488u
 gi|188596251|pdb|3CCR|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation A2488c. Density For Anisomycin Is
           Visible But Not Included In The Model.
 gi|188596282|pdb|3CCS|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation G2482a
 gi|188596313|pdb|3CCU|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation G2482c
 gi|188596344|pdb|3CCV|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
           23s Rrna Mutation G2616a
 gi|188596375|pdb|3CD6|B Chain B, Co-Cystal Of Large Ribosomal Subunit Mutant G2616a With
           Cc- Puromycin
 gi|194368706|pdb|3CPW|B Chain B, The Structure Of The Antibiotic Linezolid Bound To The
           Large Ribosomal Subunit Of Haloarcula Marismortui
 gi|206581909|pdb|3CMA|B Chain B, The Structure Of Cca And Cca-Phe-Cap-Bio Bound To The
           Large Ribosomal Subunit Of Haloarcula Marismortui
 gi|206581942|pdb|3CME|B Chain B, The Structure Of Ca And Cca-Phe-Cap-Bio Bound To The Large
           Ribosomal Subunit Of Haloarcula Marismortui
 gi|208435496|pdb|2QEX|B Chain B, Negamycin Binds To The Wall Of The Nascent Chain Exit
           Tunnel Of The 50s Ribosomal Subunit
 gi|290790037|pdb|3I55|B Chain B, Co-Crystal Structure Of Mycalamide A Bound To The Large
           Ribosomal Subunit
 gi|290790068|pdb|3I56|B Chain B, Co-Crystal Structure Of Triacetyloleandomcyin Bound To The
           Large Ribosomal Subunit
 gi|55231109|gb|AAV46528.1| 50S ribosomal protein L3 [Haloarcula marismortui ATCC 43049]
          Length = 338

 Score = 80.6 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 48/128 (37%), Gaps = 18/128 (14%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F  G+  DV G+T GKG  G +KR      +  H      R  G+ G   +P RV   
Sbjct: 193 DIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW-NPSRVRST 251

Query: 161 KKMAGRMGGNRVTVKNLEVVSV----------------DDKRGLILVKGCVPGAKKNSWI 204
               G+ G ++ T  N  ++ +                +      LVKG VPG  K   +
Sbjct: 252 VPQQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKR-LV 310

Query: 205 LVRDSFKS 212
             R + + 
Sbjct: 311 RFRPAVRP 318


>gi|298674802|ref|YP_003726552.1| 50S ribosomal protein L3 [Methanohalobium evestigatum Z-7303]
 gi|298287790|gb|ADI73756.1| ribosomal protein L3 [Methanohalobium evestigatum Z-7303]
          Length = 337

 Score = 80.6 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/141 (25%), Positives = 58/141 (41%), Gaps = 20/141 (14%)

Query: 94  VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G+  S    F  G +VD+  +T GKG  G +KR      +  H  + S R  G+ G   
Sbjct: 183 LGTKISITDVFNPGGIVDIAAITTGKGTQGPVKRWGIQIAKHKHNRAGSARQVGTLGPW- 241

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK-----------------RGLILVKGCV 195
            P  +       G+MG ++ T  N  ++ V ++                    +L+KG V
Sbjct: 242 HPAHISWRVPQMGQMGYHQRTEYNKRIIKVSNEGSEINPDGGFLNYGLVRGNYVLIKGSV 301

Query: 196 PGAKKNSWILVRDSFKSAVNC 216
           PG  K   +  RD  +S V+ 
Sbjct: 302 PGPSKR-LVRFRDPIRSKVSS 321


>gi|116755016|ref|YP_844134.1| 50S ribosomal protein L3P [Methanosaeta thermophila PT]
 gi|121693633|sp|A0B9X0|RL3_METTP RecName: Full=50S ribosomal protein L3P
 gi|116666467|gb|ABK15494.1| LSU ribosomal protein L3P [Methanosaeta thermophila PT]
          Length = 335

 Score = 80.6 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 59/145 (40%), Gaps = 20/145 (13%)

Query: 94  VGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +GS  + S  F VG+ +DV+ +T GKG  G +KR      +  H  +   R  G+ G   
Sbjct: 179 LGSQVAVSNIFNVGEWIDVSAVTKGKGTQGPVKRWGIMLQKRKHSRTGKLRHVGNLGPW- 237

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCV 195
            P R+       G+ G ++ T  N  ++++                   +   +L+KG V
Sbjct: 238 HPARISWRVPQLGQTGYHQRTEFNKRIMAIGTNGTDITPDGGFVGYGVVRNEYMLIKGSV 297

Query: 196 PGAKKNSWILVRDSFKSAVNCKGKV 220
           PG  K   + +R + +       K 
Sbjct: 298 PGPVKR-LVRMRRAIRPGAAFAPKA 321


>gi|218884488|ref|YP_002428870.1| 50S ribosomal protein L3P [Desulfurococcus kamchatkensis 1221n]
 gi|218766104|gb|ACL11503.1| 50S ribosomal protein L3P [Desulfurococcus kamchatkensis 1221n]
          Length = 396

 Score = 80.6 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 51/134 (38%), Gaps = 20/134 (14%)

Query: 89  DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148
            + +  G V +   F  GQ VDV G+T GKGF G +KR     L   H      R     
Sbjct: 237 AEGILGGYVRASDVFMEGQFVDVIGVTKGKGFQGVVKRFGVKELPRWHKHRKGSRK---I 293

Query: 149 GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS-------VDDKRG----------LILV 191
           G R            AG+MG +R T  N  ++        +  + G           I++
Sbjct: 294 GARSPGFGTMSEPPQAGQMGFHRRTEYNKRILKMGLNGLEITIEGGFLHYGLVYGPYIML 353

Query: 192 KGCVPGAKKNSWIL 205
           KG V G  K   IL
Sbjct: 354 KGTVFGPAKRMLIL 367


>gi|313111417|ref|ZP_07797222.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa 39016]
 gi|310883724|gb|EFQ42318.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa 39016]
          Length = 57

 Score = 80.2 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/56 (51%), Positives = 41/56 (73%), Gaps = 1/56 (1%)

Query: 157 VFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           +FK KKM+G +G  RVTV++LE+V VD +R L+LVKG VPGA     ++VR + K+
Sbjct: 1   MFKGKKMSGHLGAERVTVQSLEIVRVDAERNLLLVKGAVPGATGGD-VIVRPAAKA 55


>gi|48477712|ref|YP_023418.1| 50S ribosomal protein L3P [Picrophilus torridus DSM 9790]
 gi|74567866|sp|Q6L1C7|RL3_PICTO RecName: Full=50S ribosomal protein L3P
 gi|48430360|gb|AAT43225.1| large subunit ribosomal protein L3P [Picrophilus torridus DSM 9790]
          Length = 329

 Score = 80.2 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 59/274 (21%), Positives = 98/274 (35%), Gaps = 69/274 (25%)

Query: 7   ARKLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE- 55
             K+GMT +  ++        G+ I  PVTV+ +    V+  R   + G   ++V + E 
Sbjct: 44  GYKVGMTHIQMVDYRKNSVTAGQVIMAPVTVVEVPPLTVMSIRYYAR-GDNGLEVISEEW 102

Query: 56  ---------AKVKNVSKPMRGFFSS---------------VNVSPKKKLFEFRVQKDDDL 91
                     ++  +++  +G                   V+  P K    F ++     
Sbjct: 103 AENIDKDVLRRINKINRHKKGIEVKDVDDVRLMVHTNPQLVSGVPSKTPEIFEIRIGGST 162

Query: 92  LP---------VGSVFSPSYF-TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSIS 141
           +          +GS  S S F   G  VDV  +T GKGF G +KR     L   +     
Sbjct: 163 IENRIKYAKERLGSNISFSDFSKPGNFVDVIAVTKGKGFQGVVKRFGVKLLPRKNRKHR- 221

Query: 142 HRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK---------------- 185
            R  G+ G    P  V      AG++G ++ T+ N+ ++  D K                
Sbjct: 222 -RMIGTLGPW-HPDWVRNTVPQAGQVGFHQRTIHNIRIIKFDTKDHVDDINVKGGFLNYG 279

Query: 186 ---RGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
                 +L+ G VPG  K   I +RD  +     
Sbjct: 280 IVRNDYVLLFGSVPGPAKR-LIKMRDPARQTRPA 312


>gi|15790632|ref|NP_280456.1| 50S ribosomal protein L3P [Halobacterium sp. NRC-1]
 gi|169236371|ref|YP_001689571.1| 50S ribosomal protein L3P [Halobacterium salinarum R1]
 gi|42559695|sp|Q9HPD4|RL3_HALSA RecName: Full=50S ribosomal protein L3P
 gi|226725182|sp|B0R656|RL3_HALS3 RecName: Full=50S ribosomal protein L3P
 gi|10581159|gb|AAG19936.1| 50S ribosomal protein L13P [Halobacterium sp. NRC-1]
 gi|167727437|emb|CAP14225.1| ribosomal protein L3 [Halobacterium salinarum R1]
          Length = 335

 Score = 80.2 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 18/128 (14%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F  G+  D  G+T GKG  G +KR      +  H      R  G+ G   +P RV   
Sbjct: 190 DVFRAGEFTDAAGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW-NPSRVRST 248

Query: 161 KKMAGRMGGNRVTVKNLEVVSVD-----------DKRGLI-----LVKGCVPGAKKNSWI 204
               G+ G ++ T  N  ++ ++              G +     LVKG VPG ++   +
Sbjct: 249 VPQQGQTGYHQRTELNKRLIDINDGDEPTPDGGFPNYGEVDGPYTLVKGSVPGPEQR-LV 307

Query: 205 LVRDSFKS 212
             R + + 
Sbjct: 308 RFRPAVRP 315


>gi|156937755|ref|YP_001435551.1| 50S ribosomal protein L3P [Ignicoccus hospitalis KIN4/I]
 gi|156566739|gb|ABU82144.1| LSU ribosomal protein L3P [Ignicoccus hospitalis KIN4/I]
          Length = 358

 Score = 79.8 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 48/131 (36%), Gaps = 21/131 (16%)

Query: 93  PVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151
            +G +         G+ VDV G+T GKGF G +KR     L   H      R     G R
Sbjct: 203 KLGQLVDVEEVIEAGKFVDVIGVTKGKGFQGVIKRFGVKELPKWHKHRKGSRR---VGAR 259

Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVV-------SVDDKRG----------LILVKGC 194
                        G+MG +R T  N  V+        ++ + G           +++KG 
Sbjct: 260 SWGKGTSSYVPQPGQMGYHRRTDYNKRVLMISDDPSKINVEGGWLHYGLVKSKYVVLKGS 319

Query: 195 VPGAKKNSWIL 205
           V G  K   I+
Sbjct: 320 VFGPPKRPIIM 330



 Score = 34.7 bits (79), Expect = 7.8,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 13/52 (25%)

Query: 6  VARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYM 47
          +  K+GMT V  I+ R           +PVTV+      V+  R     GY 
Sbjct: 44 LGYKVGMTHVIMIDDREHVDTAGQEIFVPVTVIETPPMVVLGARV---YGYD 92


>gi|257387876|ref|YP_003177649.1| 50S ribosomal protein L3P [Halomicrobium mukohataei DSM 12286]
 gi|257170183|gb|ACV47942.1| ribosomal protein L3 [Halomicrobium mukohataei DSM 12286]
          Length = 338

 Score = 79.8 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/283 (18%), Positives = 81/283 (28%), Gaps = 79/283 (27%)

Query: 4   GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMA----- 48
           G    K GMT V  +              +PVTV+     + V  R  +   Y       
Sbjct: 41  GFAGYKAGMTHVTLVNDEPNSPREGMEETVPVTVVETPPVRAVAVRAYEDTPYGKRPLTE 100

Query: 49  ----------------------------------------VQVGAGEAKVKNVSKPMRG- 67
                                                   V+V       +  + P +  
Sbjct: 101 VWTDEFHSELDRALDLPEGHDADAAEEQVRDALDAGDIADVRVVTHTVPDELANVPKKKP 160

Query: 68  --FFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
               + V        FE  ++  DD    G       F  G+  D+  +T GKG  G +K
Sbjct: 161 DVMETRVGGGSLSDRFEHALELVDD---GGEHAMNDVFRAGEYADIAAVTKGKGTQGPVK 217

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--- 182
           R      +  H      R  G+ G   +P RV       G+ G ++ T  N  ++ +   
Sbjct: 218 RWGVQKRKGKHARQGWRRRIGNLGPW-NPSRVRSTVPQQGQTGYHQRTELNKRLIDIGDG 276

Query: 183 -------------DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
                        +      LVKG VPG  +   +  R + + 
Sbjct: 277 DDASVDGGFVNYGEVDGPYTLVKGSVPGPDQR-LVRFRPAVRP 318


>gi|296090209|emb|CBI40028.3| unnamed protein product [Vitis vinifera]
          Length = 99

 Score = 79.8 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/81 (45%), Positives = 44/81 (54%), Gaps = 1/81 (1%)

Query: 77  KKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATH 136
            + L EFR+   D   P   +     F  G LVDV+G+TIGKGF G +KRHNF     TH
Sbjct: 1   MRHLQEFRLVSVDGFEPNQKLVFEELFKEGDLVDVSGITIGKGFQGGIKRHNFRRGPMTH 60

Query: 137 GVSISHRSHGSTGCRQDPGRV 157
           G S SHR+ GS G    PG  
Sbjct: 61  G-SKSHRALGSIGAGTTPGHP 80


>gi|148801|gb|AAA86859.1| ribosomal protein L3 [Haloarcula marismortui]
          Length = 338

 Score = 79.4 bits (195), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 48/128 (37%), Gaps = 18/128 (14%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F  G+  DV G+T GKG  G +KR      +  H      R  G+ G   +P RV   
Sbjct: 193 DIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW-NPSRVRST 251

Query: 161 KKMAGRMGGNRVTVKNLEVVSV----------------DDKRGLILVKGCVPGAKKNSWI 204
               G+ G ++ T  N  ++ +                +      LVKG VPG  K   +
Sbjct: 252 VPQQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKR-LV 310

Query: 205 LVRDSFKS 212
             R + + 
Sbjct: 311 PFRPAVRP 318


>gi|13541155|ref|NP_110843.1| 50S ribosomal protein L3P [Thermoplasma volcanium GSS1]
 gi|42559678|sp|Q97BX7|RL3_THEVO RecName: Full=50S ribosomal protein L3P
 gi|14324543|dbj|BAB59470.1| ribosomal protein large subunit L3 [Thermoplasma volcanium GSS1]
          Length = 331

 Score = 79.0 bits (194), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 65/283 (22%), Positives = 97/283 (34%), Gaps = 81/283 (28%)

Query: 4   GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKN--GYMAVQV 51
           G    K+GMT V  ++ R+          +PVTV+ +    V+  R  D++  G M V  
Sbjct: 41  GFAGFKVGMTHVEMVDYRKTSVTAGQPIFVPVTVIEVPPLDVIGIRLYDEDEEGNMVVVY 100

Query: 52  ----------------GAGEAKVKNV-----------------------SKPMRGFFSSV 72
                              E K K V                        KP        
Sbjct: 101 EKWTQNLDKELFKKITTFKEVKEKPVPETYADVRLIVATRNKDVPGIPSKKPEIFELRIG 160

Query: 73  NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF-TVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
             +  K+ FE+          +G       F   G+ VDV  +T GKGF+G ++R     
Sbjct: 161 GGNSVKERFEYATAH------LGKTIRFEDFSKPGKFVDVLSVTKGKGFTGHVQRFGVKL 214

Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS---------V 182
           L   +      R  G+ G    P  V      AG+MG  + T+ N+ V+          +
Sbjct: 215 LPRKNRKHR--RMIGTLGPW-HPDWVRNTVPQAGQMGYQQRTISNVRVLKYSKGEDADTI 271

Query: 183 DDKRGLI---LVK-------GCVPGAKKNSWILVRDSFKSAVN 215
           + + G +   LVK       G VPG  K   I +RD  +  V 
Sbjct: 272 NVRGGFLHYGLVKNDYVLLFGSVPGPAKR-LIKMRDPARQKVP 313


>gi|115641910|ref|XP_001204299.1| PREDICTED: similar to Mitochondrial 39S ribosomal protein L3 (L3mt)
           (MRP-L3), partial [Strongylocentrotus purpuratus]
 gi|115660375|ref|XP_001200456.1| PREDICTED: similar to Mitochondrial 39S ribosomal protein L3 (L3mt)
           (MRP-L3), partial [Strongylocentrotus purpuratus]
          Length = 83

 Score = 78.7 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/83 (38%), Positives = 43/83 (51%)

Query: 96  SVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
           +    ++F  G  VD+   TI KGF G MKR    G  A+HG + +HR  G +G   DPG
Sbjct: 1   TPLYAAHFRPGMYVDIAAKTIDKGFQGVMKRWGMKGQPASHGATKTHRKMGGSGGGGDPG 60

Query: 156 RVFKNKKMAGRMGGNRVTVKNLE 178
           R++  KKM G MG        L+
Sbjct: 61  RIWPGKKMPGFMGDKLRWTFGLK 83


>gi|260222805|emb|CBA32730.1| hypothetical protein Csp_D33610 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 65

 Score = 78.7 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 1/62 (1%)

Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           PGRVF  K+M G +G   VT +NL+V+ VD+ R L+L+KG +PG+ K  ++ VR + K+ 
Sbjct: 1   PGRVFPGKRMTGHLGDATVTTQNLDVIRVDEARQLLLIKGAIPGS-KGGFVTVRPAVKAK 59

Query: 214 VN 215
            +
Sbjct: 60  AS 61


>gi|289579898|ref|YP_003478364.1| ribosomal protein L3 [Natrialba magadii ATCC 43099]
 gi|289529451|gb|ADD03802.1| ribosomal protein L3 [Natrialba magadii ATCC 43099]
          Length = 340

 Score = 78.3 bits (192), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 51/136 (37%), Gaps = 18/136 (13%)

Query: 94  VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
            G       F  G+ VD +G+T GKG  G +KR      +  H      R  G+ G   +
Sbjct: 188 GGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW-N 246

Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV----------------DDKRGLILVKGCVPG 197
           P RV       G+ G ++ T  N  +V +                +     +L+KG +PG
Sbjct: 247 PSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADATVDGGFVNYGEVDGPHVLIKGSLPG 306

Query: 198 AKKNSWILVRDSFKSA 213
             K   +  R + +  
Sbjct: 307 PNKR-LVRFRPAIRPG 321


>gi|170516812|gb|ACB15214.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
           DeepAnt-15E7]
          Length = 358

 Score = 77.5 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 22/144 (15%)

Query: 87  KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146
              +    G++     +  GQ +DV G+T GKG+ GA+KR     L  +H  S   R  G
Sbjct: 199 DWAEERLGGAITLDDVYETGQEIDVVGVTKGKGWQGAIKRWGIKLL--SHKNSKRRRQGG 256

Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-DDKRG-----------------L 188
           + G     G V K  + AG++G +  T  N  ++ V + +                    
Sbjct: 257 NMGDFGT-GYVRKTIRQAGQVGYHNRTELNKRILRVSNPEESDITPSGGFLNYGEVTNPY 315

Query: 189 ILVKGCVPGAKKNSWILVRDSFKS 212
           ++++G +PG  K   +  RD+ + 
Sbjct: 316 MIIQGSLPGPSKR-ILRFRDAIRP 338


>gi|73667662|ref|YP_303677.1| 50S ribosomal protein L3P [Methanosarcina barkeri str. Fusaro]
 gi|109893521|sp|Q46G95|RL3_METBF RecName: Full=50S ribosomal protein L3P
 gi|72394824|gb|AAZ69097.1| LSU ribosomal protein L3P [Methanosarcina barkeri str. Fusaro]
          Length = 337

 Score = 77.5 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 54/288 (18%), Positives = 95/288 (32%), Gaps = 72/288 (25%)

Query: 4   GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKN--GYMAVQ- 50
           G    K+GMT V  ++  +          +PVT++     +V   R   ++  G  A+  
Sbjct: 41  GFAGYKVGMTHVIMVDDTKNSLTQGMEISVPVTIIETPAIRVAAIRAYAEDTAGEKAIAE 100

Query: 51  ----------------------------VGA----GEAKVKN-----VSKPMRGFFSSV- 72
                                       +G     G+          + K + G      
Sbjct: 101 VWATDLDPELKRRIPVPKGDNMAETLGNIGKMIEEGKVSDIRAVTYTLPKSLTGVPKKTP 160

Query: 73  -NVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
             +       +   + +     +G++ S    F  G L+D   +TIGKG  G  KR    
Sbjct: 161 DIMESGISARDLNTKFEYAKSILGTLVSITDVFKTGTLIDTAAITIGKGTQGPAKRWGIQ 220

Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--DDKR-- 186
            ++  H    S R  G+ G      RV       G+ G ++ T  N  ++ +  D +   
Sbjct: 221 LMKGKHSRQGSLRQIGTLGGFG-LRRVSWRVPQMGQTGYHQRTEFNKRILKIGSDGEEVT 279

Query: 187 -------------GLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
                          +L+KG VPG  K   I +RD  ++     G+ +
Sbjct: 280 PEGGFINYGLVRGDYVLIKGSVPGPSKR-LIRLRDPIRAKKADLGEPN 326


>gi|296242583|ref|YP_003650070.1| 50S ribosomal protein L3P [Thermosphaera aggregans DSM 11486]
 gi|296095167|gb|ADG91118.1| LSU ribosomal protein L3P [Thermosphaera aggregans DSM 11486]
          Length = 395

 Score = 77.1 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/130 (27%), Positives = 50/130 (38%), Gaps = 21/130 (16%)

Query: 94  VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G + +    FT GQ +DV G+T GKGF G +KR     L   H      R     G R 
Sbjct: 241 LGGLVTVRDVFTEGQFIDVIGVTKGKGFQGVVKRFGVKVLPRWHKHRKGARK---IGSRS 297

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD------------DKRGL-----ILVKGCV 195
                      AG+ G +R T  N  ++ +                GL     +++KG V
Sbjct: 298 PAFGTMSEPPQAGQTGFHRRTDYNKRILRIGFNGLEVTPSGGFLHYGLVYGPYLMLKGTV 357

Query: 196 PGAKKNSWIL 205
            G  K   IL
Sbjct: 358 FGPAKRLLIL 367


>gi|328725484|ref|XP_003248496.1| PREDICTED: 50S ribosomal protein L4-like [Acyrthosiphon pisum]
          Length = 267

 Score = 76.7 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 4/60 (6%)

Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKG 193
            +HG S  HR  GS G   D  +VFK K++ GRMGGN VT++NLEVV VD +     VKG
Sbjct: 1   MSHG-SRYHRGSGSMGMASDASKVFKGKELPGRMGGNTVTMQNLEVVKVDAENN---VKG 56


>gi|159040903|ref|YP_001540155.1| 50S ribosomal protein L3P [Caldivirga maquilingensis IC-167]
 gi|212288253|sp|A8MB75|RL3_CALMQ RecName: Full=50S ribosomal protein L3P
 gi|157919738|gb|ABW01165.1| ribosomal protein L3 [Caldivirga maquilingensis IC-167]
          Length = 347

 Score = 76.7 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 57/140 (40%), Gaps = 22/140 (15%)

Query: 94  VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G    P   F  GQLVDV G+T GKG  G +KR     L   H      R  G+ G + 
Sbjct: 189 LGKEVKPTDVFKPGQLVDVIGVTKGKGTQGVIKRFGVKELPRWHKHRKGSRRTGTVGPK- 247

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-----------------DDKRGLILVKGCV 195
            P  ++   +M G+MG +R T  N  ++ +                   + G +L++G  
Sbjct: 248 -PAVMYTQPRM-GQMGFHRRTEYNKRILKISDNGSEITPKGGFKHYGIVRSGYMLIEGST 305

Query: 196 PGAKKNSWILVRDSFKSAVN 215
           PG  K   I  R   +   N
Sbjct: 306 PGVVKR-LIAFRYPIRPPFN 324


>gi|332158024|ref|YP_004423303.1| 50S ribosomal protein L3P [Pyrococcus sp. NA2]
 gi|331033487|gb|AEC51299.1| 50S ribosomal protein L3P [Pyrococcus sp. NA2]
          Length = 362

 Score = 76.7 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 54/148 (36%), Gaps = 30/148 (20%)

Query: 94  VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G           G+L+DV  +T GKG  G +KR         H  S   R  GS G   
Sbjct: 201 LGKEIRVGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKL--RAHKDSKGRRKVGSIGPW- 257

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL------------------------ 188
            P RV     MAG+MG +  T  N  ++++ +   L                        
Sbjct: 258 HPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGKLVIDGNEIEITPKGGFPHYGIVRSD 317

Query: 189 -ILVKGCVPGAKKNSWILVRDSFKSAVN 215
            +++ G VPG  K   I VR + +    
Sbjct: 318 FMMIAGSVPGPVKR-IIRVRPAIRPPKK 344


>gi|193084205|gb|ACF09869.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
           KM3-136-D10]
          Length = 342

 Score = 76.7 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 23/142 (16%)

Query: 90  DLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148
               +G        F+ G  +DV  +T GKG+ G++KR     L  +H  S   R  G+ 
Sbjct: 185 AEERLGQTLKVSDVFSNGNDLDVIAVTKGKGWQGSIKRWGIKLL--SHKNSKRRRQGGNM 242

Query: 149 GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------DDKRGLIL 190
           G     G V K  + AG+ G ++ T  N +V+ +                  +     I+
Sbjct: 243 GDFGT-GYVRKTIRQAGQTGYHQRTEYNKKVIRISSPDEDEVTPDGGFLRYGEVTNDYII 301

Query: 191 VKGCVPGAKKNSWILVRDSFKS 212
           V+G +PG  K   +  R+S + 
Sbjct: 302 VQGSLPGPSKR-LLRFRESVRP 322


>gi|14591535|ref|NP_143617.1| 50S ribosomal protein L3P [Pyrococcus horikoshii OT3]
 gi|6094075|sp|O59418|RL3_PYRHO RecName: Full=50S ribosomal protein L3P
 gi|3258212|dbj|BAA30895.1| 362aa long hypothetical 50S ribosomal protein L3 [Pyrococcus
           horikoshii OT3]
          Length = 362

 Score = 76.0 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 30/149 (20%)

Query: 93  PVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151
            +G           G+L+DV  +T GKG  G +KR         H  S   R  GS G  
Sbjct: 200 KLGKEIRVGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKL--RAHKDSKGRRKVGSIGPW 257

Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL----------------------- 188
             P RV     MAG+MG +  T  N  ++++ +   L                       
Sbjct: 258 -HPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGKLVIDGNEIEITPKGGFPHYGIVRG 316

Query: 189 --ILVKGCVPGAKKNSWILVRDSFKSAVN 215
             +++ G VPGA K   I VR + +    
Sbjct: 317 DFMMIAGSVPGAIKR-IIRVRPAIRPPKK 344


>gi|18978197|ref|NP_579554.1| 50S ribosomal protein L3P [Pyrococcus furiosus DSM 3638]
 gi|42559663|sp|Q8TZZ8|RL3_PYRFU RecName: Full=50S ribosomal protein L3P
 gi|18894006|gb|AAL81949.1| LSU ribosomal protein L3P [Pyrococcus furiosus DSM 3638]
          Length = 365

 Score = 76.0 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 67/190 (35%), Gaps = 33/190 (17%)

Query: 55  EAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP--VGSVFSP-SYFTVGQLVDV 111
           + +    ++P            +  +    V++  + +   +G           G+L+DV
Sbjct: 162 DVRAIVATQPWVIKLKKKPEVMEYAIGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLDV 221

Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
             +T GKG  G +KR         H  S   R  GS G    P RV     MAG+MG + 
Sbjct: 222 IAVTKGKGTQGPVKRWGIKL--RAHKDSKGRRKVGSIGPW-HPARVMWTVPMAGQMGFHH 278

Query: 172 VTVKNLEVVSV----------DDK----------------RGLILVKGCVPGAKKNSWIL 205
            T  N  ++++          + +                   +++ G VPGA K   I 
Sbjct: 279 RTELNKRLIAIGENGKLKLDENTEIEITPKGGFPHYGIVRSDFMMIAGSVPGAIKR-IIR 337

Query: 206 VRDSFKSAVN 215
           VR + +    
Sbjct: 338 VRPAIRPPKK 347


>gi|14520558|ref|NP_126033.1| 50S ribosomal protein L3P [Pyrococcus abyssi GE5]
 gi|9910846|sp|Q9V1T5|RL3_PYRAB RecName: Full=50S ribosomal protein L3P
 gi|5457774|emb|CAB49264.1| rpl3P LSU ribosomal protein L3P [Pyrococcus abyssi GE5]
          Length = 361

 Score = 76.0 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 54/149 (36%), Gaps = 30/149 (20%)

Query: 93  PVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151
            +G           G+L+DV  +T GKG  G +KR         H  S   R  GS G  
Sbjct: 199 KLGKELRVGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKL--RAHKDSKGRRKVGSIGPW 256

Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-------------------------DDKR 186
             P RV     MAG+MG +  T  N  ++++                           + 
Sbjct: 257 -HPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGKLVIDGNEIEITPKGGFPHYGIVRS 315

Query: 187 GLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             +++ G VPGA K   I VR + +    
Sbjct: 316 DFMMIAGSVPGAIKR-IIRVRPAIRPPKK 343


>gi|284165492|ref|YP_003403771.1| ribosomal protein L3 [Haloterrigena turkmenica DSM 5511]
 gi|284015147|gb|ADB61098.1| ribosomal protein L3 [Haloterrigena turkmenica DSM 5511]
          Length = 339

 Score = 75.2 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 52/136 (38%), Gaps = 18/136 (13%)

Query: 94  VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
            G       F  G+ VD +G+T GKG  G +KR      +  H      R  G+ G   +
Sbjct: 187 GGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW-N 245

Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSVD------DKRGLI----------LVKGCVPG 197
           P RV       G+ G ++ T  N  +V +          G +          L+KG +PG
Sbjct: 246 PSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADATVDGGFVNYGEVDGPHALIKGSLPG 305

Query: 198 AKKNSWILVRDSFKSA 213
            ++   +  R + +  
Sbjct: 306 PQQR-LVRFRPAIRPG 320


>gi|212223211|ref|YP_002306447.1| 50S ribosomal protein L3P [Thermococcus onnurineus NA1]
 gi|226730581|sp|B6YSL3|RL3_THEON RecName: Full=50S ribosomal protein L3P
 gi|212008168|gb|ACJ15550.1| LSU ribosomal protein L3P [Thermococcus onnurineus NA1]
          Length = 347

 Score = 74.8 bits (183), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 57/293 (19%), Positives = 92/293 (31%), Gaps = 84/293 (28%)

Query: 4   GVVARKLGMTCVYNIE-------GRRI--PVTVLHLDNCQV------------------- 35
           G    K GMT +  I+       G+ I  PVTV+ +    V                   
Sbjct: 40  GFAGYKAGMTHILMIDDRPGLTKGKEIFMPVTVVEVPPLFVYGIRAYRQGYLGLETATEV 99

Query: 36  ----------VVHRTLDKNGYM--AVQ---------VGAGEAKVKNVSKPMRGFFSSVNV 74
                        +TL K+ Y   A Q         V  GE     +    + +   +  
Sbjct: 100 WFHELNDYVKRRIKTLPKD-YNEEAFQAKLGQLEDLVNDGEIVDVRLLVHTQPWLIKLKK 158

Query: 75  SPKKKLFEFRVQK-----DDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
            P+   +           D     +G           G+L+DV  +T GKG  G +KR  
Sbjct: 159 KPEVMEYAIGGDDVKAKFDYAKEKIGKELRASEVLHEGELLDVIAVTKGKGTQGPVKRWG 218

Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV--------V 180
                     +   R  G+ G    P RV      AG+MG +  T  N  +        +
Sbjct: 219 IKIQFHKAQRAGKGRHVGNLGPW-HPTRVMWTVPQAGQMGFHHRTEFNKRLIAIGENGKL 277

Query: 181 SVDDKRGL------------------ILVKGCVPGAKKNSWILVRDSFKSAVN 215
            +D+K  +                  ++++G +PG+ K   I VR + +    
Sbjct: 278 KLDEKNEIEITPKGGFPHYGIIRSDFLMIQGTIPGSFKR-IIRVRPAIRPPKK 329


>gi|242398279|ref|YP_002993703.1| 50S ribosomal protein L3P [Thermococcus sibiricus MM 739]
 gi|259709744|sp|C6A159|RL3_THESM RecName: Full=50S ribosomal protein L3P
 gi|242264672|gb|ACS89354.1| 50S ribosomal protein L3P [Thermococcus sibiricus MM 739]
          Length = 359

 Score = 74.4 bits (182), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 52/149 (34%), Gaps = 30/149 (20%)

Query: 93  PVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151
            +G           G+L+D+  +T GKG  G +KR        +H  S   R   + G  
Sbjct: 197 KLGKEIRVGEILQEGELLDIVAVTKGKGTQGPVKRWGVKL--TSHKDSKGRRKVATIGPW 254

Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD-------------------------DKR 186
             P RV      AG+MG +  T  N  ++ +                           K 
Sbjct: 255 -HPARVMWTVPRAGQMGFHHRTEFNKRLLRIGENGKLTLNGEKIEITPNGGFPHYGVVKN 313

Query: 187 GLILVKGCVPGAKKNSWILVRDSFKSAVN 215
             I++ G +PGA K   I +R + +    
Sbjct: 314 DFIMIAGTIPGAIKR-IIRMRPAVRPPAK 341


>gi|193083756|gb|ACF09443.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
           SAT1000-15-B12]
          Length = 358

 Score = 74.0 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 23/139 (16%)

Query: 93  PVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151
            +G   S    +  GQ +DV G+T GKG+ G++KR     L  +H  S   R  G+ G  
Sbjct: 204 KLGGEISLDDVYQTGQEIDVVGITKGKGWQGSIKRWGIKLL--SHKNSKRRRQGGNMGDF 261

Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-DDKRG-----------------LILVKG 193
              G V K  + AG++G ++ T  N  ++ + + +                    ++++G
Sbjct: 262 GT-GYVRKTIRQAGQVGYHQRTELNKRILRISNPEESDITPAGGFLNYGEVTNPYMIIQG 320

Query: 194 CVPGAKKNSWILVRDSFKS 212
            +PG  K      R++ +S
Sbjct: 321 SLPGPAKRML-RFREAIRS 338


>gi|315229856|ref|YP_004070292.1| 50S ribosomal protein L3e (L3p) [Thermococcus barophilus MP]
 gi|315182884|gb|ADT83069.1| LSU ribosomal protein L3e (L3p) [Thermococcus barophilus MP]
          Length = 346

 Score = 72.9 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 52/292 (17%), Positives = 87/292 (29%), Gaps = 83/292 (28%)

Query: 4   GVVARKLGMTCVYNIE-------GRRI--PVTVLHLDNCQVVVHRTLDKNGYMAVQVG-- 52
           G    K GMT +  I+       G+ I  PVT++      V   R   K GY+ ++    
Sbjct: 40  GFAGYKAGMTHILMIDDRPGLTKGKEIFMPVTIVETPPMVVFGIR-AYKQGYLGLETATE 98

Query: 53  --------------------------------------AGEAKVKNVSKPMRGFFSSVNV 74
                                                 +GE          +     +  
Sbjct: 99  VWIPNLNPDLKRRIKTLPKNYDEGAFQQKLGELEDLVKSGEIVEVRALVHTQPRLIKLKK 158

Query: 75  SPKKKLFEFRVQKDDDLL-----PVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
            P+   +    +  +D        +G           G+L+DV  +T GKG  G +KR  
Sbjct: 159 KPEVMEYAVGGKSVEDKFAYLKEKLGKEIRAKEVLKEGELLDVIAVTKGKGTQGPVKRWG 218

Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------ 182
                     +   R  G+ G    P RV      AG+MG +  T  N  ++++      
Sbjct: 219 IKIQFHKAQRAGKGRHVGNLGPW-HPARVMWTVPQAGQMGFHHRTEFNKRLIAIGENGFL 277

Query: 183 -------------------DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
                                +   +++ G VPGA K   + VR + +    
Sbjct: 278 ELNGNKIEITPKGGFPHYGIVRSDFLMIAGSVPGAIKR-IVRVRPAIRPPAK 328


>gi|254173063|ref|ZP_04879737.1| ribosomal protein L3 [Thermococcus sp. AM4]
 gi|214033219|gb|EEB74047.1| ribosomal protein L3 [Thermococcus sp. AM4]
          Length = 346

 Score = 72.5 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 55/292 (18%), Positives = 89/292 (30%), Gaps = 83/292 (28%)

Query: 4   GVVARKLGMTCVYNIE-------GR--RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA- 53
           G    K GMT +  I+       G+   +PVT++ +    V   R   K GY+ ++    
Sbjct: 40  GFAGYKAGMTHILMIDDSPGLTKGKEIFVPVTIVEVPPLFVYGIR-AYKQGYLGLETATE 98

Query: 54  ---------------------------------------GEAKVKNVSKPMRGFFSSVNV 74
                                                  GE     +    + +   +  
Sbjct: 99  VWFHELNDNVKRRIKTLPKNYGEEDFKAKLGQLEDLVNDGEIVDVRLLVHTQPWLIKLKK 158

Query: 75  SPKKKLFEFRVQK-----DDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
            P+   +           D     +G           G+L+DV  +T GKG  G +KR  
Sbjct: 159 KPEVMEYAIGGDDVKAKFDYAKEKIGKELRASEVLHEGELLDVIAVTKGKGTQGPVKRWG 218

Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188
                     +   R  G+ G    P RV      AG+MG +  T  N  ++++ +   L
Sbjct: 219 IKVQFHKAQRAGKGRHVGNLGPW-HPARVMWTVPQAGQMGFHHRTEFNKRLIAIGENGKL 277

Query: 189 IL-------------------------VKGCVPGAKKNSWILVRDSFKSAVN 215
           IL                         ++G VPGA K   I VR + +    
Sbjct: 278 ILNGNEIEITPKGGFPHYGVIRSDFLMIEGSVPGAFKR-IIRVRPAIRPPKK 328


>gi|294496017|ref|YP_003542510.1| 50S ribosomal protein L3P [Methanohalophilus mahii DSM 5219]
 gi|292667016|gb|ADE36865.1| LSU ribosomal protein L3P [Methanohalophilus mahii DSM 5219]
          Length = 337

 Score = 72.1 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 56/286 (19%), Positives = 89/286 (31%), Gaps = 72/286 (25%)

Query: 4   GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGY------- 46
           G    K+GMT V  I+  +          +PVTV+      +   R      Y       
Sbjct: 41  GFAGYKVGMTHVIMIDDAKNSLTEGAEIAVPVTVIETPQIGIAAIRAYKDTPYGEKTISE 100

Query: 47  ----------------------------MAVQVGAGEAKVKNV-----SKPMRGFFSSVN 73
                                       MA  V  G+     V        + G      
Sbjct: 101 AWSANLDGDIGRRIKTPKNYNTEKSLENMASLVEEGKVSEIRVITYTIPSSVSGIPKKKA 160

Query: 74  VSPKKKLFEFRVQKDDDL--LPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
              +  +    V+   +     +GS  +    F+ G ++DV  +T G G  G +KR    
Sbjct: 161 DIMETAVSGSDVKAKFEYAKYILGSKVAISDIFSEGNIIDVAAITRGYGTEGPVKRWGIQ 220

Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--DDKR-- 186
             +  H    S R  G+ G    P   ++     G+ G ++ T  N  ++ V  D     
Sbjct: 221 LAKNKHSRQSSLRQVGTLGPWNPPHVSWR-VPQMGQAGYHQRTEYNKRILKVSSDVDEVN 279

Query: 187 -------------GLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
                          ILVKG VPG  K   I +R+  +   +  G+
Sbjct: 280 PAGGFVNYGLVGGDYILVKGTVPGPSKR-LIRLREPTRPKTSAVGE 324


>gi|207109616|ref|ZP_03243778.1| 50S ribosomal protein L3 [Helicobacter pylori HPKX_438_CA4C1]
          Length = 116

 Score = 72.1 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 13/126 (10%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           + +K+GM+    I+    PVT+L +   +V       +NG   V     +      +K +
Sbjct: 4   LVQKIGMSR--TIDANSTPVTLLKVLQAKVCQL----ENGKALVAYAMHKKH----NKAI 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G      +S +     F   K      +G     S     + V  +  T G+GF+G MK
Sbjct: 54  EGQQKKYQLSKEFNH--FATLKASQQKELGD-LDLSALETLKRVKASFKTKGRGFAGVMK 110

Query: 126 RHNFGG 131
           R NF G
Sbjct: 111 RWNFQG 116


>gi|145628333|ref|ZP_01784134.1| 50S ribosomal protein L4 [Haemophilus influenzae 22.1-21]
 gi|145640871|ref|ZP_01796453.1| 50S ribosomal protein L3 [Haemophilus influenzae R3021]
 gi|144980108|gb|EDJ89767.1| 50S ribosomal protein L4 [Haemophilus influenzae 22.1-21]
 gi|145274385|gb|EDK14249.1| 50S ribosomal protein L3 [Haemophilus influenzae 22.4-21]
          Length = 49

 Score = 71.7 bits (175), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 1/50 (2%)

Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
           MAG +G  RVTV++LEVV VD +R L+LVKG VPGA  N  ++V+ + K+
Sbjct: 1   MAGHLGAERVTVQSLEVVRVDAERKLLLVKGSVPGAI-NGDVIVKPAVKA 49


>gi|315425680|dbj|BAJ47337.1| large subunit ribosomal protein L3 [Candidatus Caldiarchaeum
           subterraneum]
 gi|315427562|dbj|BAJ49161.1| large subunit ribosomal protein L3 [Candidatus Caldiarchaeum
           subterraneum]
          Length = 320

 Score = 71.7 bits (175), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 48/268 (17%), Positives = 90/268 (33%), Gaps = 65/268 (24%)

Query: 4   GVVARKLGMTCVYNIE--------GRRIP--VTVLHLDNCQVVVH--------------- 38
           G +  K+GMT V+ I+        G  +    TV+     +V+                 
Sbjct: 40  GFIGYKVGMTMVHYIDNTPNSPTQGSEVAKACTVVAAPPLKVIGISLYRNVDGELVNIGK 99

Query: 39  ---RTLDKNGY----------MAVQVGA--GEAKVKNVSKPMRGFFSSVNVSPKKKLFEF 83
              + + ++             A ++G    +     +    +        +P+    + 
Sbjct: 100 YWSKEVPEDVKRRNPTFRPMPSAEEIGQLEDDVDEVRIVVATQPRLVGAGKAPRIAEIKI 159

Query: 84  RVQKDDDLLP----VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGV 138
             +  + L      VG        F  GQ VDV  +T GKGF G +KR+    L+     
Sbjct: 160 GGKPAEALEKAKQLVGKDLRVTDVFKEGQFVDVIAVTKGKGFQGVVKRYGVSILQRKSRK 219

Query: 139 SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS-------VDDKRG---- 187
           +   R   + G   +P  V      +G+MG +R T  N  ++        ++ K G    
Sbjct: 220 TR--RGVAAIGPW-NPHYVMYTVPRSGQMGYHRRTEFNKRILRIGDDPASINPKSGWHRF 276

Query: 188 ------LILVKGCVPGAKKNSWILVRDS 209
                  ++++G V G      +L   +
Sbjct: 277 GLVKSDYLVLEGSVAGTPLRPLVLRAPA 304


>gi|302774326|ref|XP_002970580.1| hypothetical protein SELMODRAFT_411279 [Selaginella moellendorffii]
 gi|300162096|gb|EFJ28710.1| hypothetical protein SELMODRAFT_411279 [Selaginella moellendorffii]
          Length = 115

 Score = 71.3 bits (174), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 2/48 (4%)

Query: 7   ARKLGMTC--VYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
             K GMT   V++  GRRIP+TVL  D+ QVV  +T+D   + A+QVG
Sbjct: 63  GVKCGMTSTAVWDKWGRRIPITVLWADDNQVVQVKTVDHETFKALQVG 110


>gi|2425176|dbj|BAA22270.1| ribosomal protein L3 [Halobacterium salinarum]
          Length = 330

 Score = 71.3 bits (174), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 18/115 (15%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F  G+  D  G+T GKG  G +KR      +  H   ++ R  G+ G   +P RV   
Sbjct: 186 DVFRAGEFADAAGITKGKGTQGPVKRWGVQKRKGKHARHVA-RRIGNLGPW-NPSRVRST 243

Query: 161 KKMAGRMGGNRVTVKNLEVVSVD-----------DKRGLI-----LVKGCVPGAK 199
               G+ G ++ T  N  ++ ++              G +     LVKG VPG +
Sbjct: 244 VPQQGQTGYHQRTELNKRLIDINDGDEPSPDGGFPNYGEVDGPYTLVKGSVPGPE 298


>gi|193084317|gb|ACF09976.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
           KM3-130-D10]
          Length = 358

 Score = 71.3 bits (174), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 22/137 (16%)

Query: 94  VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
            G++     +  GQ +DV G+T GKG+ G++KR     L  +H  S   R  G+ G    
Sbjct: 206 GGTISLDDVYQTGQEIDVVGVTKGKGWQGSIKRWGIKLL--SHKNSKRRRQGGNMGDFGT 263

Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV-DDKRG-----------------LILVKGCV 195
              V K  + AG++G ++ T  N  ++ + + +                    ++++G +
Sbjct: 264 -RYVRKTIRQAGQVGYHQRTELNKRILRISNPEESDITPAGGFLNYGEVTNPYMIIQGSL 322

Query: 196 PGAKKNSWILVRDSFKS 212
           PG  K      R++ +S
Sbjct: 323 PGPAKRML-RFREAIRS 338


>gi|115675312|ref|XP_001202265.1| PREDICTED: similar to Mitochondrial ribosomal protein L3, partial
           [Strongylocentrotus purpuratus]
 gi|115711825|ref|XP_780771.2| PREDICTED: similar to Mitochondrial ribosomal protein L3, partial
           [Strongylocentrotus purpuratus]
          Length = 98

 Score = 71.0 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 1/81 (1%)

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
                F SV +  K+ +  F V  +  L P G+    ++F  G  VD+   TI KGF G 
Sbjct: 4   EYADLFKSVCLPVKEHITSFNVTDNAALQP-GTPLYAAHFRPGMYVDIAAKTIDKGFQGV 62

Query: 124 MKRHNFGGLRATHGVSISHRS 144
           MKR    G  A+HG + +HR 
Sbjct: 63  MKRWGMKGQPASHGATKTHRK 83


>gi|193083866|gb|ACF09547.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
           KM3-85-F5]
          Length = 350

 Score = 71.0 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 22/137 (16%)

Query: 94  VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
            G +     +  GQ VDV G+T GKG+ G++KR     L  TH  S   R  G+ G    
Sbjct: 198 GGQIGLDDVYQAGQEVDVVGVTKGKGWQGSIKRFGLKLL--THKNSKRRRQGGNMGDFGT 255

Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------DDKRGLILVKGCV 195
            G V K  + AG++G ++ T  N  ++ +                  + +   ++V+G +
Sbjct: 256 -GYVRKTIRQAGQVGYHKRTELNKRILRISNPDESEITPAGGFLNYGEVRNPYMIVQGSL 314

Query: 196 PGAKKNSWILVRDSFKS 212
           PG  K   +  RD  + 
Sbjct: 315 PGPAKR-LLRFRDPIRP 330


>gi|170291100|ref|YP_001737916.1| 50S ribosomal protein L3P [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170175180|gb|ACB08233.1| ribosomal protein L3 [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 332

 Score = 71.0 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 61/280 (21%), Positives = 98/280 (35%), Gaps = 79/280 (28%)

Query: 7   ARKLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHRTLDKNGYMAVQ------ 50
             K+GM  V   E        G++I    TV+     ++V  R   K GY  ++      
Sbjct: 41  GYKVGMVHVLLKEDRPGKLNLGQQITLASTVIETPPIEIVGFR-AYKEGYYGLKPLTTAL 99

Query: 51  -------------VGAG-----------------EAKVKNVSKP-MRGFFSSV----NVS 75
                        +G G                 E ++ + ++P + G          + 
Sbjct: 100 RIEKKDPISRTLTIGEGVDNFNEALSKLEGAKVSEIRILSYTRPDLAGIHKKKPEFMEIP 159

Query: 76  PKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRA 134
            K    E R++    L  VGS       F VGQLVDVT +T G G+ G ++R     LR 
Sbjct: 160 VKGGEMEERIEFAKSL--VGSQLKVDSVFKVGQLVDVTAVTKGHGWQGVVRRFGIELLR- 216

Query: 135 THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------ 182
            H         GS G R  P   ++    AG+ G ++ T  N  ++ +            
Sbjct: 217 -HKAGKGRWRVGSLGSRHPPYVTWR-VPRAGQTGYHKRTEYNKRILMMGDLTKGDLDLSP 274

Query: 183 --------DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
                     +   IL+ G VPG  K  ++ +R   + + 
Sbjct: 275 KGGFKNYGILRSQYILLSGSVPGPAKR-FVFIRHPIRPSY 313


>gi|16082270|ref|NP_394728.1| 50S ribosomal protein L3P [Thermoplasma acidophilum DSM 1728]
 gi|42559694|sp|Q9HIQ9|RL3_THEAC RecName: Full=50S ribosomal protein L3P
 gi|10640617|emb|CAC12395.1| 50S ribosomal protein L3 related protein [Thermoplasma acidophilum]
          Length = 331

 Score = 71.0 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/142 (28%), Positives = 59/142 (41%), Gaps = 24/142 (16%)

Query: 94  VGSVFSPSYF-TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G   + + F   G+ VDV  +T GKGF+G +KR     L   +      R  G+ G   
Sbjct: 176 LGKQITFTDFSKPGKFVDVVSITKGKGFTGHVKRFGVKLLPRKNRKHR--RMIGTLGPW- 232

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVS------VD-------------DKRGLILVKG 193
            P  V      AG+MG  + T+ N+ V+       VD              K   +L+ G
Sbjct: 233 HPDWVRNTVPQAGQMGFQQRTISNVRVIKYGNKEEVDSINVRGGFLHYGFVKNDYVLLFG 292

Query: 194 CVPGAKKNSWILVRDSFKSAVN 215
            +PGA K   I +RD  +  V 
Sbjct: 293 SIPGASKR-LIKMRDPARQKVP 313


>gi|77024938|gb|ABA61365.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
           HF70_59C08]
          Length = 338

 Score = 70.6 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 55/286 (19%), Positives = 86/286 (30%), Gaps = 86/286 (30%)

Query: 4   GVVARKLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
           G    K GMT V   +        G  +   VTV+ +   +V+  R     GY     G 
Sbjct: 42  GFAGWKAGMTHVMMRDLNPGSPSAGAEVRKAVTVVEVPPMRVLAVR-----GYKMTPYGK 96

Query: 54  GEAKVKNVSK--------------PMRG------FFSS---------------------V 72
             A     S               P R                                 
Sbjct: 97  QTAGEAWASADKLSDVIPSLPRRIPERKEHDANAHLDKLRESDLAEVRLIVSSQPDKVSA 156

Query: 73  NVSPKKKLFEFRVQKDD-------DLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAM 124
             S   ++ E  +   D           +G        F  G  +DV G+T G G  G +
Sbjct: 157 VGSKSPEIMEMGLTGGDLGAQLDWAAEKLGEELGIEDVFESGSDIDVIGVTKGYGNQGVV 216

Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-- 182
           +R     L  +H  S   R  G+ G     G V K  + AG+ G ++ T  N  ++ +  
Sbjct: 217 RRFGVKLL--SHKNSKRRRQIGNMGDFGT-GYVRKTIRQAGQTGYHQRTEYNKRILRIAG 273

Query: 183 ----------------DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
                           + K   ++++G +PG  K   I  RD+ + 
Sbjct: 274 EEESQITPAGGFLHYGEVKNHYMIIQGSLPGPAKR-LIRFRDAARP 318


>gi|47079404|gb|AAT10147.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
           DeepAnt-JyKC7]
          Length = 358

 Score = 70.2 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 23/141 (16%)

Query: 94  VGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G        +  G+ +DV G+T GKG+ G +KR     L  +H  S   R  G+ G   
Sbjct: 205 LGGEIGIDDVYEAGKELDVVGITKGKGWQGVIKRFGVKLL--SHKNSKRRRQIGNMGDFG 262

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------DDKRGLILVKGC 194
             G V K  + AG+MG ++ T  N  ++ +                  +     ++++G 
Sbjct: 263 T-GYVRKTIRQAGQMGYHKRTELNKRILRISNPGESDVTPAGGFLHYGEVTNPYMVLEGS 321

Query: 195 VPGAKKNSWILVRDSFKSAVN 215
           +PG  K   +  RD  +   N
Sbjct: 322 LPGPAKR-LLRFRDPVRPHTN 341


>gi|291333648|gb|ADD93339.1| ribosomal protein L3 [uncultured archaeon MedDCM-OCT-S11-C441]
          Length = 348

 Score = 69.8 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 23/142 (16%)

Query: 90  DLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148
            L  +G        + VGQ VDV G+T GKG+ G++KR     L  +H  S   R  G+ 
Sbjct: 191 ALERLGGEIGIEDVYDVGQEVDVVGVTKGKGWQGSIKRFGLKLL--SHKNSKRRRQGGNM 248

Query: 149 GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-DDKRGLI-----------------L 190
           G     G V K  + AG++G ++ T  N +++ + + +   I                 +
Sbjct: 249 GDFGT-GYVRKTIRQAGQVGYHKRTELNKKILRISNPEESEITPAGGFLNYGEVTNPYMI 307

Query: 191 VKGCVPGAKKNSWILVRDSFKS 212
           ++G +PG  K   I  RD  + 
Sbjct: 308 IQGSLPGPAKR-LIRFRDPTRP 328


>gi|110668741|ref|YP_658552.1| 50S ribosomal protein L3P [Haloquadratum walsbyi DSM 16790]
 gi|121692171|sp|Q18GE9|RL3_HALWD RecName: Full=50S ribosomal protein L3P
 gi|109626488|emb|CAJ52949.1| ribosomal protein L3 [Haloquadratum walsbyi DSM 16790]
          Length = 338

 Score = 69.8 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 49/129 (37%), Gaps = 18/129 (13%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F  G+ +D  G+T GKG  G +KR      +  H      R  G+ G   +P RV   
Sbjct: 193 DIFRAGEYLDAAGVTKGKGTQGPVKRFGVQKRKGKHARQGYRRRIGNLGPW-NPSRVRST 251

Query: 161 KKMAGRMGGNRVTVKNLEVVSV----------------DDKRGLILVKGCVPGAKKNSWI 204
               G+ G ++ T  N  ++ +                +      L+KG +PG  +   +
Sbjct: 252 VPQQGQTGYHQRTELNKRLIEIGNGDEPTVDGGFVGYGEVDGPYALIKGSLPGPDQR-LL 310

Query: 205 LVRDSFKSA 213
             R + + +
Sbjct: 311 RFRTAVRPS 319


>gi|255098787|gb|ACU00734.1| 60S ribosomal protein L3 [Nosema bombycis]
 gi|326573816|gb|ADZ95674.1| 60S ribosomal protein L3 [Nosema bombycis]
          Length = 384

 Score = 69.4 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 49/123 (39%), Gaps = 16/123 (13%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F V + +D  G+T GKGF G +KR                R     G    P RV   
Sbjct: 203 EVFEVNENLDTIGVTKGKGFQGVVKRFGVTIQP--RKSRKGIRKVACIGAW-HPSRVMTT 259

Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRGL-----------ILVKGCVP--GAKKNSWILVR 207
              AG+MG +R T  N +V  + +   L           I   G +P  G+ KN +I+V+
Sbjct: 260 VARAGQMGFHRRTETNKKVYMIGNGNELIKTEFDLTEKPITPLGGIPHYGSIKNDYIMVK 319

Query: 208 DSF 210
            + 
Sbjct: 320 GAV 322


>gi|57641477|ref|YP_183955.1| 50S ribosomal protein L3P [Thermococcus kodakarensis KOD1]
 gi|73917495|sp|Q5JDJ0|RL3_PYRKO RecName: Full=50S ribosomal protein L3P
 gi|57159801|dbj|BAD85731.1| LSU ribosomal protein L3P [Thermococcus kodakarensis KOD1]
          Length = 346

 Score = 69.4 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 54/292 (18%), Positives = 93/292 (31%), Gaps = 83/292 (28%)

Query: 4   GVVARKLGMTCVYNIE-------GR--RIPVTVLHLDNCQVVVHRTLDKNGY----MAVQ 50
           G    K GMT +  I+       G+   +PVT++ +    V   R   K GY     A +
Sbjct: 40  GFAGYKAGMTHILMIDDSPGLTKGKEIFVPVTIVEVPPLFVYGIR-AYKQGYLGLETATE 98

Query: 51  VGAGE--------AKVKNVSKPMRGFFSS--------------------------VNVSP 76
           V   +         K    +     F +                           + +  
Sbjct: 99  VWFHDLHKNVARRIKTLPKNYNEEAFQAKLGQLEDLVNDGEIADVRLLVHTQPWLIGLKK 158

Query: 77  KKKLFEFRVQKDD-------DLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
           K ++ E+ +  DD           +G           G+L+DV  +T GKG  G +KR  
Sbjct: 159 KPEVMEYAIGGDDVKAKFDYAKEKIGKELRAGEVLHEGELLDVIAVTKGKGTQGPVKRWG 218

Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------ 182
                     +   R  G+ G    P RV      AG+MG +  T  N  ++++      
Sbjct: 219 VKVQFHKAQRAGKGRHIGNLGPW-HPARVMWTVPQAGQMGFHHRTEFNKRLIAIGENGKL 277

Query: 183 -------------------DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
                                +   ++++G +PG+ K   I VR + +    
Sbjct: 278 VLDGNEIEITPKGGFPHYGIVRSDFLMIEGTIPGSFKR-IIRVRPAIRPPKK 328


>gi|240104060|ref|YP_002960369.1| 50S ribosomal protein L3P [Thermococcus gammatolerans EJ3]
 gi|259709743|sp|C5A286|RL3_THEGJ RecName: Full=50S ribosomal protein L3P
 gi|239911614|gb|ACS34505.1| LSU ribosomal protein L3P (rpl3P) [Thermococcus gammatolerans EJ3]
          Length = 346

 Score = 69.0 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 51/287 (17%), Positives = 87/287 (30%), Gaps = 83/287 (28%)

Query: 4   GVVARKLGMTCVYNIE-------GR--RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA- 53
           G    K GMT +  I+       G+   +PVT++ +    V   R   K GY+ ++    
Sbjct: 40  GFAGYKAGMTHILMIDDSPGLTKGKEIFVPVTIVEVPPLFVYGIR-AYKQGYLGLETATE 98

Query: 54  ---------------------------------------GEAKVKNVSKPMRGFFSSVNV 74
                                                  GE     +    + +   +  
Sbjct: 99  VWFHELNDNVKRRIKTLPKNYGEEDFKAKLGQLEDLVNDGEIVDVRLLVHTQPWLIKLKK 158

Query: 75  SPKKKLFEFRVQKDDDLLP-----VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
            P+   +                 +G           G+L+DV  +T GKG  G +KR  
Sbjct: 159 KPEVMEYAIGGDDVKAKFEYAKERIGKEIRASEVLHEGELLDVIAVTKGKGTQGPVKRWG 218

Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188
                     +   R  G+ G    P RV      AG+MG +  T  N  ++++ +   L
Sbjct: 219 VKVQFHKAQRAGKGRHIGNLGPW-HPARVMWTVPQAGQMGFHHRTEFNKRLIAIGENGKL 277

Query: 189 -------------------------ILVKGCVPGAKKNSWILVRDSF 210
                                    ++++G VPG+ K   I VR + 
Sbjct: 278 VLNGNEIDITPKGGFPHYGIIRSDFLMIEGSVPGSFKR-IIRVRPAI 323


>gi|329765069|ref|ZP_08256653.1| 50S ribosomal protein L3P [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329138446|gb|EGG42698.1| 50S ribosomal protein L3P [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 330

 Score = 69.0 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 55/141 (39%), Gaps = 25/141 (17%)

Query: 94  VGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G        F  G  +DV  +T GKG+ G ++R      +  H    + R   S G   
Sbjct: 180 LGKEIKIDQIFETGATIDVAAITKGKGWQGVIQRFGVK--KKQHKSRKTVREVASLGPIS 237

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-DDKRG-------------------LILVK 192
               ++     AG+MG ++ T  + +++ + + +                      I++K
Sbjct: 238 PASVMYS-VPRAGQMGFHQRTEYDKKIMVIGNTENNQIKINPDGGYKHFGLVKGDFIILK 296

Query: 193 GCVPGAKKNSWILVRDSFKSA 213
           G VPG  +   I +R   ++A
Sbjct: 297 GSVPGTYRR-LIKLRSQIRNA 316


>gi|257076559|ref|ZP_05570920.1| 50S ribosomal protein L3P [Ferroplasma acidarmanus fer1]
          Length = 319

 Score = 69.0 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 58/151 (38%), Gaps = 24/151 (15%)

Query: 90  DLLPVGSVFSPSYFTV-GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148
               +G       F   G  VDV  +T GKGF G +KR     L  ++      R  G+ 
Sbjct: 160 AEEKLGKELHFDDFNSTGSFVDVISVTKGKGFQGVVKRFGVKLLPRSNRKHR--RMIGTL 217

Query: 149 GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS------VD-------------DKRGLI 189
           G    P  V      AG++G ++ T+ N+ ++       VD              +   I
Sbjct: 218 GPW-HPDWVRNTVPQAGQVGLHQRTIHNIRIMKTATKEQVDEINVKGGFLKYGLVRNDYI 276

Query: 190 LVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
           L+ G + G  K   I +RD  + AV    KV
Sbjct: 277 LLYGSISGPSKR-LIKMRDPARQAVPNTDKV 306


>gi|315425735|dbj|BAJ47391.1| large subunit ribosomal protein L3 [Candidatus Caldiarchaeum
           subterraneum]
          Length = 289

 Score = 68.6 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 77/224 (34%), Gaps = 48/224 (21%)

Query: 4   GVVARKLGMTCVYNIE--------GRRIP--VTVLHLDNCQVVVH--------------- 38
           G +  K+GMT V+ I+        G  +    TV+     +V+                 
Sbjct: 40  GFIGYKVGMTMVHYIDNTPNSPTQGSEVAKACTVVAAPPLKVIGISLYRNVDGELVNIGK 99

Query: 39  ---RTLDKNGY----------MAVQVGA--GEAKVKNVSKPMRGFFSSVNVSPKKKLFEF 83
              + + ++             A ++G    +     +    +        +P+    + 
Sbjct: 100 YWSKEVPEDVKRRNPTFRPMPSAEEIGQLEDDVDEVRIVVATQPRLVGAGKAPRIAEIKI 159

Query: 84  RVQKDDDLLP----VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGV 138
             +  + L      VG        F  GQ VDV  +T GKGF G +KR+    L+     
Sbjct: 160 GGKPAEALEKAKQLVGKDLRVTDVFKEGQFVDVIAVTKGKGFQGVVKRYGVSILQRKSRK 219

Query: 139 SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           +   R   + G   +P  V      +G+MG +R T  N  ++ +
Sbjct: 220 TR--RGVAAIGPW-NPHYVMYTVPRSGQMGYHRRTEFNKRILRI 260


>gi|303388761|ref|XP_003072614.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506]
 gi|303301755|gb|ADM11254.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506]
          Length = 383

 Score = 68.3 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 49/139 (35%), Gaps = 32/139 (23%)

Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
              F   + +DV G+T GKGF G +KR                R     G    P RV  
Sbjct: 202 AEVFGENENIDVIGVTKGKGFQGTVKRFGVRKQP--RKSRKGIRKVACIGAW-HPSRVMY 258

Query: 160 NKKMAGRMGGNRVTVKNLEVVSV----------------------------DDKRGLILV 191
           +   AG+MG +R T KN  V  +                            + K   I+V
Sbjct: 259 SVARAGQMGFHRRTEKNKRVYMIGNGSTKIKTEFDLTEKAISPMGGFPHYGEVKNDFIMV 318

Query: 192 KGCVPGAKKNSWILVRDSF 210
           KG V G +K   + +R S 
Sbjct: 319 KGAVVGPRKR-VVTLRKSL 336


>gi|303390711|ref|XP_003073586.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506]
 gi|303302733|gb|ADM12226.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506]
          Length = 383

 Score = 67.9 bits (165), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 49/139 (35%), Gaps = 32/139 (23%)

Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
              F   + +DV G+T GKGF G +KR                R     G    P RV  
Sbjct: 202 AEVFGENENIDVIGVTKGKGFQGTVKRFGVRKQP--RKSRKGIRKVACIGAW-HPSRVMY 258

Query: 160 NKKMAGRMGGNRVTVKNLEVVSV----------------------------DDKRGLILV 191
           +   AG+MG +R T KN  V  +                            + K   I+V
Sbjct: 259 SVARAGQMGFHRRTEKNKRVYMIGNGSTKIKTEFDLTEKAISPMGGFPHYGEVKNDFIMV 318

Query: 192 KGCVPGAKKNSWILVRDSF 210
           KG V G +K   + +R S 
Sbjct: 319 KGAVVGPRKR-VVTLRKSL 336


>gi|161528317|ref|YP_001582143.1| 50S ribosomal protein L3P [Nitrosopumilus maritimus SCM1]
 gi|160339618|gb|ABX12705.1| ribosomal protein L3 [Nitrosopumilus maritimus SCM1]
          Length = 331

 Score = 67.9 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 54/140 (38%), Gaps = 25/140 (17%)

Query: 94  VGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G        F  G  VDV  +T GKG+ G +KR N    +  H    + R  GS G   
Sbjct: 181 LGKEIKIDQIFETGASVDVAAITKGKGWQGVLKRWNVK--KKQHKSRKTVREVGSLGPIS 238

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEV----------VSVDDKRG----------LILVK 192
            P  V      AG+ G ++    +  +          + ++   G           I++K
Sbjct: 239 -PQSVMYTVPRAGQFGFHQRVEYDKRIMIMGNTDDDKLKINPDGGFKHFGLVKGDFIVLK 297

Query: 193 GCVPGAKKNSWILVRDSFKS 212
           G VPGA +   I +R   ++
Sbjct: 298 GSVPGAYRR-LIKLRSQIRN 316


>gi|118576052|ref|YP_875795.1| ribosomal protein L3 [Cenarchaeum symbiosum A]
 gi|118194573|gb|ABK77491.1| ribosomal protein L3 [Cenarchaeum symbiosum A]
          Length = 328

 Score = 66.7 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/148 (24%), Positives = 56/148 (37%), Gaps = 24/148 (16%)

Query: 94  VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G           G  VDV  +T GKG+ G ++R   G  R  H    + R  GS G   
Sbjct: 179 LGKTVKASDVLEPGAGVDVAAITKGKGWQGVIQR--MGAKRKQHKSRKTVRELGSLGPIS 236

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-------------------DDKRGLILVKG 193
            P  V      AG+MG ++    N  +++V                     K   I++KG
Sbjct: 237 -PQNVMYTVPRAGQMGFHQRIEYNKRIMAVGSAGEDDAINPSGGYKHFGMVKGDYIVLKG 295

Query: 194 CVPGAKKNSWILVRDSFKSAVNCKGKVS 221
            VPG  +   + +R   ++A     K +
Sbjct: 296 SVPGTYRR-LVKLRAQIRNAPKRTSKPN 322


>gi|88597634|ref|ZP_01100867.1| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 84-25]
 gi|88189938|gb|EAQ93914.1| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 84-25]
          Length = 115

 Score = 65.6 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 14/126 (11%)

Query: 6   VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
           +  K+GM+         I VT+L + N +V       + G   V    G+A     +K +
Sbjct: 4   IVEKIGMSRTITNP--SIAVTLLRVVNAKVCEV----EGGKALVAYPKGKAS----NKCV 53

Query: 66  RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
            G     N+S +   F      +      G     +     +++ V+  T G+G+SG MK
Sbjct: 54  AGQQKKYNLSAEYNRFA---TLEVANTEAGD-LDETPLNEAKILKVSFNTKGRGYSGVMK 109

Query: 126 RHNFGG 131
           RHNF G
Sbjct: 110 RHNFAG 115


>gi|269986342|gb|EEZ92643.1| ribosomal protein L3 [Candidatus Parvarchaeum acidiphilum ARMAN-4]
          Length = 301

 Score = 65.2 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 58/272 (21%), Positives = 97/272 (35%), Gaps = 63/272 (23%)

Query: 4   GVVARKLGMTCV-YNIEGRRIPV---------TVLHLDNCQVVVHRTLDK---------- 43
           G    K+GM  + Y    +  P          TVL      V   R  +K          
Sbjct: 29  GFAGYKVGMIQLSYIDSDKNSPTFKMEVITNATVLESPPLFVCALRFYNKGSSIGESWGS 88

Query: 44  --NGYMAVQVGA-----------GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKD-D 89
             N ++A QV             G+     +    + +   +++  K ++FE  +  + +
Sbjct: 89  GINKFVARQVKFKENNKSVDDFKGKFDDIRLIVSTQPW--KIDLKKKPEVFELCIGGNLE 146

Query: 90  DLLPVGSVF------SPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHR 143
           D L +G         + S    G  VDV  +T GKGF+G++KR+           S S R
Sbjct: 147 DKLTLGKELLSKEIEASSVIKDGNFVDVASVTKGKGFTGSVKRYGVKIYPV--HASKSRR 204

Query: 144 SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-----------------DDKR 186
             G+ G  +   +V       GR+G N     N  V  V                 + K 
Sbjct: 205 KAGNLGA-ESMAKVQFTVPQHGRLGFNSRVEYNKFVFRVIKDADEVNIPSGYKRYGNVKG 263

Query: 187 GLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
             I++KG VPG+  +  I++R + +     + 
Sbjct: 264 SAIILKGSVPGSA-SRLIMLRKAIRPTKKAEP 294


>gi|308160270|gb|EFO62765.1| Ribosomal protein L3 [Giardia lamblia P15]
          Length = 379

 Score = 64.8 bits (157), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 47/146 (32%), Gaps = 34/146 (23%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F+VG  +D   +T G+GF G + R     L         +R     G    P  V   
Sbjct: 207 DVFSVGAQIDTISITRGRGFEGVVTRWGVTRLP--RKTRRGNRKVACIGAW-HPANVQYT 263

Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRG------------------------------LIL 190
              AG+MG    T  N +V  +D                                   I+
Sbjct: 264 VARAGQMGYFHRTDTNKQVFMIDTAENPKCCTTEFDLTDKSINPVGGFVNYGRVQGDFIM 323

Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNC 216
           +KG  PG K+   ++ R +     NC
Sbjct: 324 IKGTCPGPKRRPVVM-RSALLPHRNC 348


>gi|19173079|ref|NP_597630.1| 60S RIBOSOMAL PROTEIN L3 [Encephalitozoon cuniculi GB-M1]
 gi|85014317|ref|XP_955654.1| 60S ribosomal protein L3 [Encephalitozoon cuniculi GB-M1]
 gi|51701710|sp|Q8SQI3|RL3_ENCCU RecName: Full=60S ribosomal protein L3
 gi|19168746|emb|CAD26265.1| 60S RIBOSOMAL PROTEIN L3 [Encephalitozoon cuniculi GB-M1]
 gi|19171348|emb|CAD27073.1| 60S RIBOSOMAL PROTEIN L3 [Encephalitozoon cuniculi GB-M1]
          Length = 383

 Score = 64.4 bits (156), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 36/138 (26%), Positives = 50/138 (36%), Gaps = 32/138 (23%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F V + +D  G+T GKGF G +KR                R     G    P RV  +
Sbjct: 203 EVFGVNENIDTIGVTKGKGFQGTVKRFGVRKQP--RKSRKGIRKVACIGAW-HPSRVMYS 259

Query: 161 KKMAGRMGGNRVTVKNLEVVSV----------------------------DDKRGLILVK 192
              AG+MG +R T KN  V  +                            + +   I+VK
Sbjct: 260 IARAGQMGFHRRTEKNKRVYMIGNGSSNIKTEFDLTEKPISPMGGFPHYGEVRNDFIMVK 319

Query: 193 GCVPGAKKNSWILVRDSF 210
           G V GA+K   + +R S 
Sbjct: 320 GAVVGARKR-VVTLRKSL 336


>gi|94734479|emb|CAK11308.1| mitochondrial ribosomal protein L3 [Danio rerio]
          Length = 137

 Score = 64.4 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/35 (48%), Positives = 23/35 (65%)

Query: 2   RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVV 36
           R G+VA KLGM  V++  G R  VT+L + +C VV
Sbjct: 103 RVGLVAIKLGMMPVWSKSGERHVVTMLQVKDCHVV 137


>gi|253747835|gb|EET02309.1| Ribosomal protein L3 [Giardia intestinalis ATCC 50581]
          Length = 379

 Score = 64.4 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 43/135 (31%), Gaps = 33/135 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F VG+ +D   +T G+GF G + R     L         +R     G    P  V   
Sbjct: 207 DVFEVGKQIDTISITRGRGFEGVVTRWGVTRLP--RKTRRGNRKVACIGSW-HPANVQYT 263

Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRG------------------------------LIL 190
              AG+MG    T  N +V  +D                                   I+
Sbjct: 264 VARAGQMGYFHRTDTNKQVFMIDTAENPRCCTTEFDLTDKSINPVGGFVNYGRIQGDFIM 323

Query: 191 VKGCVPGAKKNSWIL 205
           +KG  PG K+   ++
Sbjct: 324 IKGTCPGPKRRPVVM 338


>gi|302833677|ref|XP_002948402.1| component of cytosolic 80S ribosome and 60S large subunit [Volvox
           carteri f. nagariensis]
 gi|300266622|gb|EFJ50809.1| component of cytosolic 80S ribosome and 60S large subunit [Volvox
           carteri f. nagariensis]
          Length = 386

 Score = 64.4 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 58/191 (30%), Gaps = 48/191 (25%)

Query: 50  QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQL 108
           ++G G+ K   +   + G   +  V     +FE                S    F   ++
Sbjct: 168 KLGFGQKKAHLIEIQVNGGTVAQKVDFAYAMFE-------------KQVSVDAVFQPNEM 214

Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
           +D   +T G G  G ++R     L          R     G    P RV      AG+ G
Sbjct: 215 IDTIAITKGHGVQGVVQRWGVTRLP--RKTHRGLRKVACIGAW-HPARVKWTVARAGQQG 271

Query: 169 GNRVTVKNLEVVSVDDK-------------------------------RGLILVKGCVPG 197
            +  T  N +V  +  K                                  I+VKG VPG
Sbjct: 272 FHHRTEINKKVYKIGKKGEASHLATTDFDVTKKEITPMGGFPHYGVVNEDYIMVKGAVPG 331

Query: 198 AKKNSWILVRD 208
            KK +  L R 
Sbjct: 332 TKKRAITLRRS 342


>gi|159109947|ref|XP_001705236.1| Ribosomal protein L3 [Giardia lamblia ATCC 50803]
 gi|157433317|gb|EDO77562.1| Ribosomal protein L3 [Giardia lamblia ATCC 50803]
          Length = 379

 Score = 64.4 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 48/146 (32%), Gaps = 34/146 (23%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F+VG  +D   +T G+GF G + R     L         +R     G    P  V   
Sbjct: 207 DVFSVGAQIDTISITRGRGFEGVVTRWGVTRLP--RKTRRGNRKVACIGAW-HPANVQYT 263

Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRG------------------------------LIL 190
              AG+MG    T  N +V  +D                                   I+
Sbjct: 264 VARAGQMGYFHRTDTNKQVFMIDTAENPRCCTTEFDLTDKSINPVGGFVNYGRVQGDFIM 323

Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNC 216
           +KG  PG K+   ++ R++     NC
Sbjct: 324 IKGTCPGPKRRPVVM-RNALLPHRNC 348


>gi|161899261|ref|XP_001712857.1| ribosomal protein L3 [Bigelowiella natans]
 gi|75756351|gb|ABA27245.1| ribosomal protein L3 [Bigelowiella natans]
          Length = 370

 Score = 63.6 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 35/147 (23%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F    ++D  G+T G G  G + R     L          R     G    P RV   
Sbjct: 191 SIFHENDIIDAIGITKGHGTKGVVSRWGITRLP--RKTHRGLRKVACIGPW-TPSRVAWT 247

Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRG-------------------------------LI 189
              AG+ G ++ T+ N ++  +  +                                  +
Sbjct: 248 ISRAGQKGYHKRTLFNKKIYKIGSEENFSYYSNSLSDSIVKSVNCMGGFKKFGFINNDYL 307

Query: 190 LVKGCVPGAKKNSWILVRDSFKSAVNC 216
           ++KG + G+ K   IL+R + K+ ++ 
Sbjct: 308 IIKGSMTGSSKRP-ILLRKNIKNKISS 333


>gi|302412909|ref|XP_003004287.1| 60S ribosomal protein L3 [Verticillium albo-atrum VaMs.102]
 gi|261356863|gb|EEY19291.1| 60S ribosomal protein L3 [Verticillium albo-atrum VaMs.102]
          Length = 391

 Score = 63.3 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 49/144 (34%), Gaps = 35/144 (24%)

Query: 97  VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
             S    F   +++DV  +T GKGF+G   R     L          R     G    P 
Sbjct: 203 EVSVDSIFEQDEMIDVIAVTKGKGFNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPS 259

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV-------------DDKRGLI------------- 189
            V      AG+MG +  T  N +V  +             D  + +I             
Sbjct: 260 HVQWTVARAGQMGYHHRTSVNHKVYRIAKAGAEDSASTELDVTKKVITPLGGFVRYGEIN 319

Query: 190 ----LVKGCVPGAKKNSWILVRDS 209
               +VKG +PG KK   + +R S
Sbjct: 320 NDFVMVKGSIPGPKKR-VVTLRKS 342


>gi|118389862|ref|XP_001027976.1| ribosomal protein L3 containing protein [Tetrahymena thermophila]
 gi|3861468|emb|CAA10068.1| ribosomal protein L3 [Tetrahymena thermophila]
 gi|89309746|gb|EAS07734.1| ribosomal protein L3 containing protein [Tetrahymena thermophila
           SB210]
          Length = 391

 Score = 63.3 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/127 (25%), Positives = 48/127 (37%), Gaps = 19/127 (14%)

Query: 97  VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
                  F   +++DV G+T GKGF+G +KR               +R  G  G    P 
Sbjct: 200 EVKVDSIFAENEMLDVLGVTKGKGFAGVIKRFGVK--HLQKKTHRGYRKVGCIGAW-HPS 256

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV-------------DDKRGLILVKGCVP--GAKK 200
           R+      AG++G +  T  N +V  V             D     I   G  P  G  K
Sbjct: 257 RIRFTVPRAGQLGYHHRTETNKKVYRVGKGDDASNASTAGDVTDKAITPLGGFPHYGVVK 316

Query: 201 NSWILVR 207
           N +I+++
Sbjct: 317 NDFIMIK 323


>gi|301500876|ref|YP_003795288.1| ribosomal protein L3 [Chromera velia]
 gi|300069422|gb|ADJ66530.1| ribosomal protein L3 [Chromera velia]
          Length = 193

 Score = 63.3 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 11/111 (9%)

Query: 95  GSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP 154
           G +         +   +      KGF G + R+ F     THG S  H + GS G    P
Sbjct: 82  GELVDTKSLKYWEQFKIQTSAKQKGFLGVVARYKFTKGPKTHGSSH-HAAPGSIGAGTSP 140

Query: 155 GRVFKNKKMAGRMGGNRV-----TVKNLEVVSVDDKRGLILVKGCVPGAKK 200
           GRV   KK+ GR    +      T + L V     ++  + V G +PG +K
Sbjct: 141 GRVLPGKKLPGRRPLAKRNYMINTYRLLSV-----QQNKVEVPGTLPGRRK 186


>gi|296424388|ref|XP_002841730.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637978|emb|CAZ85921.1| unnamed protein product [Tuber melanosporum]
          Length = 640

 Score = 62.9 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 50/293 (17%), Positives = 73/293 (24%), Gaps = 98/293 (33%)

Query: 3   SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
           +  +  K GMT +    +  G ++        VTV+      +V                
Sbjct: 294 TAALGYKAGMTTIVRDLDRPGAKMHKKEVVEAVTVIETPPMVIVGVVGYVETPRGLRSLT 353

Query: 39  ------------RTLDKNGYMA-----VQVGAGEAKVKNVSKPMRGFFSSVNV------- 74
                       R   KN Y +      +     A          G              
Sbjct: 354 TVWAEHLSDDLKRRFYKNWYKSKKKAFTKYAKRHAGEGKAISHELGRIKKYCTVVRVLAH 413

Query: 75  ---------SPKKKLFEFRVQKDDDLLPV--------GSVFSPSYFTVGQLVDVTGMTIG 117
                      K  L E +V        V          V   S F   +++DV  +T G
Sbjct: 414 SQIRKTPLKQKKTHLMEIQVNGGSITDKVDFAFSHFEKEVTISSIFEQDEMIDVIAVTKG 473

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
            GF+G   R     L          R     G    P  V      AG+ G +  T  N 
Sbjct: 474 HGFNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWTVARAGQDGYHHRTSVNH 530

Query: 178 EVVSVDD------------------------------KRGLILVKGCVPGAKK 200
           ++  +                                K   ++VKG VPG KK
Sbjct: 531 KIYRIGSGTDEGNASTEFDITKKTITPLGGFPRYGEIKNDFVMVKGSVPGVKK 583


>gi|21215170|gb|AAM43909.1|AF464911_1 large subunit ribosomal protein L3 [Aspergillus fumigatus]
          Length = 392

 Score = 62.9 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 42/130 (32%), Gaps = 33/130 (25%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GF G   R     L          R     G    P  V   
Sbjct: 208 SIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              AG+MG +  T  N +V  +                              + K   I+
Sbjct: 265 VARAGQMGYHHRTSCNHKVFRIGKGSDEGNASTDFDISKKQITPMGGFVRYGEVKNDYIM 324

Query: 191 VKGCVPGAKK 200
           VKG VPG KK
Sbjct: 325 VKGSVPGVKK 334


>gi|71001672|ref|XP_755517.1| 60S ribosomal protein L3 [Aspergillus fumigatus Af293]
 gi|83305621|sp|Q8NKF4|RL3_ASPFU RecName: Full=60S ribosomal protein L3; AltName: Allergen=Asp f 23
 gi|66853155|gb|EAL93479.1| 60S ribosomal protein L3 [Aspergillus fumigatus Af293]
 gi|159129584|gb|EDP54698.1| 60S ribosomal protein L3 [Aspergillus fumigatus A1163]
          Length = 392

 Score = 62.9 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 42/130 (32%), Gaps = 33/130 (25%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GF G   R     L          R     G    P  V   
Sbjct: 208 SIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              AG+MG +  T  N +V  +                              + K   I+
Sbjct: 265 VARAGQMGYHHRTSCNHKVFRIGKGSDEGNASTDFDISKKQITPMGGFVRYGEVKNDYIM 324

Query: 191 VKGCVPGAKK 200
           VKG VPG KK
Sbjct: 325 VKGSVPGVKK 334


>gi|254572870|ref|XP_002493544.1| Protein component of the large (60S) ribosomal subunit [Pichia
           pastoris GS115]
 gi|238033343|emb|CAY71365.1| Protein component of the large (60S) ribosomal subunit [Pichia
           pastoris GS115]
 gi|328354631|emb|CCA41028.1| 60S ribosomal protein L3 [Pichia pastoris CBS 7435]
          Length = 388

 Score = 62.5 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 47/154 (30%), Gaps = 35/154 (22%)

Query: 96  SVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP 154
              +    F   + +DV  +T G GF G   R     L          R     G    P
Sbjct: 201 QTIAVDTVFEQNENIDVIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HP 257

Query: 155 GRVFKNKKMAGRMGGNRVTVKNLEVVSV---DDKRG------------------------ 187
             V      AG+ G +  T  N ++  V   DD+                          
Sbjct: 258 AHVMWTVARAGQNGFHHRTSINHKIYRVGKGDDESNGSTEYDRTKKTVTPLGGFVRYGEI 317

Query: 188 ---LILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
               +++KG +PG  K   + +R S  +  + K 
Sbjct: 318 RNDFVMIKGSIPGPVKR-VVTLRKSLYTQTSRKA 350


>gi|121715726|ref|XP_001275472.1| 60S ribosomal protein L3 [Aspergillus clavatus NRRL 1]
 gi|119403629|gb|EAW14046.1| 60S ribosomal protein L3 [Aspergillus clavatus NRRL 1]
          Length = 392

 Score = 61.7 bits (149), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 42/130 (32%), Gaps = 33/130 (25%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GF G   R     L          R     G    P  V   
Sbjct: 208 SIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              AG+MG +  T  N +V  +                              + K   ++
Sbjct: 265 VARAGQMGYHHRTSCNHKVFRIGKGTDEGNASTEFDISKKQITPMGGFVRYGEVKNDYVM 324

Query: 191 VKGCVPGAKK 200
           VKG VPG KK
Sbjct: 325 VKGSVPGVKK 334


>gi|119481241|ref|XP_001260649.1| transcriptional corepressor Cyc8, putative [Neosartorya fischeri
           NRRL 181]
 gi|119408803|gb|EAW18752.1| transcriptional corepressor Cyc8, putative [Neosartorya fischeri
           NRRL 181]
          Length = 392

 Score = 61.7 bits (149), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 42/130 (32%), Gaps = 33/130 (25%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GF G   R     L          R     G    P  V   
Sbjct: 208 SIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              AG+MG +  T  N +V  +                              + K   ++
Sbjct: 265 VARAGQMGYHHRTSCNHKVFRIGKGSDEGNASTEFDISKKQITPMGGFVRYGEVKNDYVM 324

Query: 191 VKGCVPGAKK 200
           VKG VPG KK
Sbjct: 325 VKGSVPGVKK 334


>gi|160331207|ref|XP_001712311.1| rpl3 [Hemiselmis andersenii]
 gi|159765758|gb|ABW97986.1| rpl3 [Hemiselmis andersenii]
          Length = 388

 Score = 61.7 bits (149), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 45/130 (34%), Gaps = 33/130 (25%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F   +++D  G+T GKGF G +KR     L          R     G        F+ 
Sbjct: 212 DIFRQREIIDTIGITKGKGFQGVIKRWGVTKLP--RKTHRGARKVACVGSWHPSRVSFR- 268

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              AG+ G +  T  NL++  V                              + K   +L
Sbjct: 269 VPRAGQTGFHHRTQINLQIYRVGKALDSNNGSTEFDLSTKKITPMGGFPYYGNVKEDFLL 328

Query: 191 VKGCVPGAKK 200
           +KGCV G+KK
Sbjct: 329 LKGCVMGSKK 338


>gi|6537320|gb|AAF15600.1|AF198447_1 60S ribosomal protein L3 [Emericella nidulans]
 gi|259479602|tpe|CBF69975.1| TPA: 60S ribosomal protein L3 [Source:UniProtKB/TrEMBL;Acc:Q9UV31]
           [Aspergillus nidulans FGSC A4]
          Length = 392

 Score = 61.3 bits (148), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 41/129 (31%), Gaps = 33/129 (25%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV  +T G GF G   R     L          R     G    P  V    
Sbjct: 209 IFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWTV 265

Query: 162 KMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLILV 191
             AG+MG +  T  N +V  +                              + K   IL+
Sbjct: 266 ARAGQMGYHHRTSCNHKVFRIGKGSDEANASTDFDVSKKQITPLGGFVRYGEVKNDFILL 325

Query: 192 KGCVPGAKK 200
           KG VPG KK
Sbjct: 326 KGSVPGVKK 334


>gi|67540064|ref|XP_663806.1| RL3_NEUCR 60S ribosomal protein L3 [Aspergillus nidulans FGSC A4]
 gi|40738798|gb|EAA57988.1| RL3_NEUCR 60S ribosomal protein L3 [Aspergillus nidulans FGSC A4]
          Length = 447

 Score = 61.3 bits (148), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 41/129 (31%), Gaps = 33/129 (25%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV  +T G GF G   R     L          R     G    P  V    
Sbjct: 264 IFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWTV 320

Query: 162 KMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLILV 191
             AG+MG +  T  N +V  +                              + K   IL+
Sbjct: 321 ARAGQMGYHHRTSCNHKVFRIGKGSDEANASTDFDVSKKQITPLGGFVRYGEVKNDFILL 380

Query: 192 KGCVPGAKK 200
           KG VPG KK
Sbjct: 381 KGSVPGVKK 389


>gi|302658162|ref|XP_003020788.1| hypothetical protein TRV_05095 [Trichophyton verrucosum HKI 0517]
 gi|291184652|gb|EFE40170.1| hypothetical protein TRV_05095 [Trichophyton verrucosum HKI 0517]
          Length = 565

 Score = 61.3 bits (148), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 35/152 (23%)

Query: 98  FSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGR 156
                 F   ++VDV  +T G GFSG   R     L          R     G    P  
Sbjct: 223 IDVDSVFEKDEVVDVIAVTKGHGFSGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSH 279

Query: 157 VFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------DDKR 186
           V      AG+ G +  T  N ++  +                              + K 
Sbjct: 280 VQWTVARAGQDGYHHRTSANHKIYRIGKADDEGNASTEFDVSKKRITPMGGFVRYGEVKN 339

Query: 187 GLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
             +++KG +PG +K   + +R +    V+ K 
Sbjct: 340 DYVMLKGSIPGVRKR-VVTLRKTLWPQVSRKA 370


>gi|169774881|ref|XP_001821908.1| 60S ribosomal protein L3 [Aspergillus oryzae RIB40]
 gi|238496503|ref|XP_002379487.1| 60S ribosomal protein L3 [Aspergillus flavus NRRL3357]
 gi|83769771|dbj|BAE59906.1| unnamed protein product [Aspergillus oryzae]
 gi|220694367|gb|EED50711.1| 60S ribosomal protein L3 [Aspergillus flavus NRRL3357]
          Length = 392

 Score = 61.3 bits (148), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 42/130 (32%), Gaps = 33/130 (25%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GF G   R     L          R     G    P  V   
Sbjct: 208 SIFEKDEVIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              AG+MG +  T  N +V  +                              + K   ++
Sbjct: 265 VARAGQMGYHHRTSCNHKVYRIGKGSDEANASTDFDISKKQITPMGGFVRYGEVKNDFVM 324

Query: 191 VKGCVPGAKK 200
           VKG VPG KK
Sbjct: 325 VKGSVPGVKK 334


>gi|328876376|gb|EGG24739.1| 60S ribosomal protein L3 [Dictyostelium fasciculatum]
          Length = 455

 Score = 60.9 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 49/153 (32%), Gaps = 39/153 (25%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T GKGF G +KR     L          R     G    P RV   
Sbjct: 209 SVFAENEMLDVISVTKGKGFQGVVKRWGVKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSVD-----------------------------------DK 185
              AG+MG       N ++  +                                     +
Sbjct: 266 VPRAGQMGFFHRVETNKKIYRIGKAQPTTGPKIPTGATEFDITAKTITPMGGFLNYGVVR 325

Query: 186 RGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
              I+VKGCV G  K   I +R S +  V   G
Sbjct: 326 NEFIMVKGCVGGPAKR-VITLRKSIRPNVTRAG 357


>gi|300521620|gb|ADK26021.1| r-protein L3p [Candidatus Nitrososphaera gargensis]
          Length = 332

 Score = 60.9 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/149 (26%), Positives = 59/149 (39%), Gaps = 28/149 (18%)

Query: 94  VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G        F VGQ +DV G+T GKG  G + R  FG  R  H    S R+ G+ G   
Sbjct: 180 LGREVKVSDIFQVGQNIDVFGITRGKGIEGPVTR--FGIKRKQHKSRKSVRAVGTLGPIS 237

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVV-----------SVDD----------KRGLILV 191
            P  V       G+ G ++ T  N  ++           S++           K   I+V
Sbjct: 238 -PAVVMYTVARQGQRGFHQRTEYNKRILVMSNTEKDGQNSINPSGGFKHFGLVKGDYIIV 296

Query: 192 KGCVPGAKKNSWIL---VRDSFKSAVNCK 217
           +G VPG  K    +   +R+  K  +  K
Sbjct: 297 RGSVPGVPKRLIKMRQPIRNVSKKVLEPK 325


>gi|302502186|ref|XP_003013084.1| hypothetical protein ARB_00629 [Arthroderma benhamiae CBS 112371]
 gi|291176646|gb|EFE32444.1| hypothetical protein ARB_00629 [Arthroderma benhamiae CBS 112371]
          Length = 557

 Score = 60.9 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 35/152 (23%)

Query: 98  FSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGR 156
                 F   ++VDV  +T G GFSG   R     L          R     G    P  
Sbjct: 223 IDVDSVFEKDEVVDVIAVTKGHGFSGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSH 279

Query: 157 VFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------DDKR 186
           V      AG+ G +  T  N ++  +                              + K 
Sbjct: 280 VQWTVARAGQDGYHHRTSANHKIYRIGKADDEGNASTDFDVSKKRITPMGGFVRYGEVKN 339

Query: 187 GLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
             +++KG +PG +K   + +R +    V+ K 
Sbjct: 340 DYVMLKGSIPGVRKR-VVTLRKTLWPQVSRKA 370


>gi|269859601|ref|XP_002649525.1| LSU ribosomal protein L3P [Enterocytozoon bieneusi H348]
 gi|220067076|gb|EED44544.1| LSU ribosomal protein L3P [Enterocytozoon bieneusi H348]
          Length = 329

 Score = 60.2 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 4/87 (4%)

Query: 97  VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
               +  F+  + +D  G+T GKGF G +KR     L      +   R     G    P 
Sbjct: 146 EIKVNNVFSKSEFLDTIGVTKGKGFQGVVKRWGTTILP--RKTNKGIRKVACIGAF-HPS 202

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           RV  +   AG++G +R T +NL V  +
Sbjct: 203 RVMYSVARAGQVGFHRRTQQNLLVYDI 229


>gi|145608344|ref|XP_360650.2| large subunit ribosomal protein L3 [Magnaporthe oryzae 70-15]
 gi|145015825|gb|EDK00315.1| large subunit ribosomal protein L3 [Magnaporthe oryzae 70-15]
          Length = 392

 Score = 60.2 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 42/129 (32%), Gaps = 33/129 (25%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++D+  +T G GF+G   R     L          R     G    P  V    
Sbjct: 209 IFEQNEMIDIIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWTV 265

Query: 162 KMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LILV 191
             AG+MG +  T  N +V  +   D +                              ++V
Sbjct: 266 ARAGQMGYHHRTSVNHKVYRIGKGDAEDNAATEIDVTKKKITPMGGFVRYGEINNDFVMV 325

Query: 192 KGCVPGAKK 200
           KG +PG KK
Sbjct: 326 KGSIPGTKK 334


>gi|1197059|gb|AAA88732.1| ribosomal protein L3 [Saccharomyces cerevisiae]
          Length = 387

 Score = 60.2 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 47/140 (33%), Gaps = 34/140 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++D   +T G GF G   R     L          R     G    P  V  +
Sbjct: 207 SVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAC-HPAHVMWS 263

Query: 161 KKMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LIL 190
              AG+ G +  T  N ++  V   DD+                              I+
Sbjct: 264 VARAGQRGYHSRTSINHKIYRVGKGDDEANGATSFDRTKKTITPMGGFVHYGEIKNDFIM 323

Query: 191 VKGCVPGAKKNSWILVRDSF 210
           VKGC+PG +K   + +R S 
Sbjct: 324 VKGCIPGNRKR-IVTLRKSL 342


>gi|300709014|ref|XP_002996676.1| hypothetical protein NCER_100207 [Nosema ceranae BRL01]
 gi|239605995|gb|EEQ83005.1| hypothetical protein NCER_100207 [Nosema ceranae BRL01]
          Length = 384

 Score = 60.2 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 16/123 (13%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F + + +DV G+T GKGF+G +KR                R     G    P RV   
Sbjct: 203 DIFDINENLDVIGVTKGKGFTGVVKRFGVTKQP--RKSRKGIRKVACIGAW-HPSRVMTT 259

Query: 161 KKMAGRMGGNRVTVKNLEVVSV-----------DDKRGLILVKGCVP--GAKKNSWILVR 207
              AG  G +R T  N +V  +           D    LI   G  P  G+ KN +I+++
Sbjct: 260 VARAGGKGFHRRTEINKKVYMIGHGKEKIKTEFDLTEKLITPMGGFPHYGSIKNDFIMLK 319

Query: 208 DSF 210
            + 
Sbjct: 320 GAI 322


>gi|308798657|ref|XP_003074108.1| ribosomal protein L3.e, cytosolic-rice sp|P35684|RL3_ORYSA 60S
           ribosomal p (ISS) [Ostreococcus tauri]
 gi|116000280|emb|CAL49960.1| ribosomal protein L3.e, cytosolic-rice sp|P35684|RL3_ORYSA 60S
           ribosomal p (ISS) [Ostreococcus tauri]
          Length = 421

 Score = 59.8 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++D+ G+T GKGF G + R     L          R  G  G    P RV   
Sbjct: 241 SVFQQDEMIDLIGVTKGKGFQGVVTRWGVTKLP--RKTHRGLRKVGCIGAW-HPSRVSYT 297

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+MG +  T  N +V  +
Sbjct: 298 VARAGQMGYHHRTELNKKVYKI 319


>gi|303273052|ref|XP_003055887.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226461971|gb|EEH59263.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 387

 Score = 59.8 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 45/142 (31%), Gaps = 34/142 (23%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++D   +T GKGF G + R     L          R  G  G    P RV   
Sbjct: 208 AVFAKDEMIDCISVTKGKGFEGVVTRWGVTRLP--RKTHRGLRKVGCIGAW-HPARVGYT 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDK-------------------------------RGLI 189
               G+ G +  T  N ++  V  +                                  +
Sbjct: 265 VARPGQHGYHHRTEINKKIYRVGKEGDSSHKASTDHDATEKDITPMGGFPHYGIVRNDYL 324

Query: 190 LVKGCVPGAKKNSWILVRDSFK 211
           ++KG + G +K    L R  FK
Sbjct: 325 MIKGGIAGPRKRLITLRRSLFK 346


>gi|145232153|ref|XP_001399531.1| 60S ribosomal protein L3 [Aspergillus niger CBS 513.88]
 gi|134056442|emb|CAL00609.1| unnamed protein product [Aspergillus niger]
          Length = 392

 Score = 59.8 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 42/130 (32%), Gaps = 33/130 (25%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GF G   R     L          R     G    P  V   
Sbjct: 208 SIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPNHVQWT 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              AG+MG +  T  N +V  V                              + K   +L
Sbjct: 265 VARAGQMGYHHRTSCNHKVFRVGKGSDEGNASTDFDISKKQITPMGGFVHYGEVKNDFVL 324

Query: 191 VKGCVPGAKK 200
           +KG VPG KK
Sbjct: 325 LKGSVPGVKK 334


>gi|284073154|gb|ADB77816.1| 60S ribosomal protein L3 [Chlamydomonas reinhardtii]
 gi|284073156|gb|ADB77817.1| 60S ribosomal protein L3 [Cladophora coelothrix]
          Length = 384

 Score = 59.8 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 54/302 (17%), Positives = 83/302 (27%), Gaps = 99/302 (32%)

Query: 3   SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVV---------------- 36
           +  +  K GMT +       G ++       PVT++      VV                
Sbjct: 44  TAFMGYKAGMTHIVRDVEKPGSKLHKKETCEPVTIIECPPMVVVGAVGYVKTPRGLRSLN 103

Query: 37  ----------VHRTLDKNGYM---------AVQVGAGEAKVKNVSKPMRGFF-------- 69
                     V R   KN Y          A +   G+  ++     ++           
Sbjct: 104 TVWAEHLSEEVKRRFYKNWYKSKKKAFTKYAKKYSDGKKAIEAELAALKKHCCVIRVLAH 163

Query: 70  ---SSVNVSPKK-KLFEFRVQKDDDLLPV-------GSVFSPS-YFTVGQLVDVTGMTIG 117
                +    KK  L E +V        V           S    F   +++D   +T G
Sbjct: 164 TQVKKLGFGVKKAHLMEVQVNGGTVAQKVDFAYSMFEKQVSVDAVFQPNEMIDTIAITKG 223

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
            G  G ++R     L          R     G    P RV      AG+ G +  T  N 
Sbjct: 224 HGVQGVVQRWGVTRLP--RKTHRGLRKVACIGAW-HPARVKWTVARAGQQGFHHRTEINK 280

Query: 178 EVVSVDDK-------------------------------RGLILVKGCVPGAKKNSWILV 206
           +V  +  K                                  +++KGCVPG KK +  L 
Sbjct: 281 KVYKIGKKGDASHLATTEFDVTKKEITPMGGFPHYGVVSEDYLMIKGCVPGTKKRAITLR 340

Query: 207 RD 208
           R 
Sbjct: 341 RS 342


>gi|159489312|ref|XP_001702641.1| ribosomal protein L3, component of cytosolic 80S ribosome and 60S
           large subunit [Chlamydomonas reinhardtii]
 gi|158280663|gb|EDP06420.1| ribosomal protein L3 [Chlamydomonas reinhardtii]
          Length = 386

 Score = 59.8 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 58/191 (30%), Gaps = 48/191 (25%)

Query: 50  QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQL 108
           ++G G  K   +   + G   +  V     +FE                S    F   ++
Sbjct: 168 KLGFGVKKAHLMEVQVNGGTVAQKVDFAYSMFE-------------KQVSVDAVFQPNEM 214

Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
           +D   +T G G  G ++R     L          R     G    P RV      AG+ G
Sbjct: 215 IDTIAITKGHGVQGVVQRWGVTRLP--RKTHRGLRKVACIGAW-HPARVKWTVARAGQQG 271

Query: 169 GNRVTVKNLEVVSVDDK-------------------------------RGLILVKGCVPG 197
            +  T  N +V  +  K                                  +++KGCVPG
Sbjct: 272 FHHRTEINKKVYKIGKKGDASHLATTEFDVTKKEITPMGGFPHYGVVSEDYLMIKGCVPG 331

Query: 198 AKKNSWILVRD 208
            KK +  L R 
Sbjct: 332 TKKRAITLRRS 342


>gi|255071333|ref|XP_002507748.1| ribosomal protein L3 [Micromonas sp. RCC299]
 gi|226523023|gb|ACO69006.1| ribosomal protein L3 [Micromonas sp. RCC299]
          Length = 385

 Score = 59.8 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 45/141 (31%), Gaps = 35/141 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++D   ++ GKGF G + R     L          R  G  G    P RV   
Sbjct: 206 AVFNKDEMIDCISVSKGKGFEGVVTRWGVTRLP--RKTHRGLRKVGCIGAW-HPARVAFT 262

Query: 161 KKMAGRMGGNRVTVKNLEVVSV-------------------------------DDKRGLI 189
               G+ G +  T  N ++  V                                 K   +
Sbjct: 263 VARPGQHGYHHRTEINKKIYRVGKEGEDSHKATTEHDATDKDITPMGGFPHYGIVKNDYL 322

Query: 190 LVKGCVPGAKKNSWILVRDSF 210
           ++KG + G +K   I +R S 
Sbjct: 323 MIKGGIAGPRKR-VITLRQSL 342


>gi|171689180|ref|XP_001909530.1| hypothetical protein [Podospora anserina S mat+]
 gi|170944552|emb|CAP70663.1| unnamed protein product [Podospora anserina S mat+]
          Length = 392

 Score = 59.8 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 41/129 (31%), Gaps = 33/129 (25%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV  +T G GFSG   R     L          R     G    P  V    
Sbjct: 209 IFEKDEMIDVIAVTKGHGFSGVTARWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWTV 265

Query: 162 KMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LILV 191
             AG+MG +  T  N +V  +   D                                ++V
Sbjct: 266 ARAGQMGYHHRTSVNHKVYRIGKGDADDNAATEIDVTKKTITPMGGFVRYGEIKNDFVMV 325

Query: 192 KGCVPGAKK 200
           KG VPG KK
Sbjct: 326 KGSVPGTKK 334


>gi|50411414|ref|XP_457044.1| DEHA2B01804p [Debaryomyces hansenii CBS767]
 gi|74659529|sp|Q6BXM5|RL3_DEBHA RecName: Full=60S ribosomal protein L3
 gi|49652709|emb|CAG85030.1| DEHA2B01804p [Debaryomyces hansenii]
          Length = 389

 Score = 59.8 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 45/140 (32%), Gaps = 34/140 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   ++VDV  +T G GF G   R     L          R     G    P  V   
Sbjct: 207 SVFEKDEMVDVAAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPANVQWT 263

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              AG+ G +  T  N +V  V                              + K   +L
Sbjct: 264 VARAGQNGFHHRTSINHKVYRVGSAGDESSGATEFDRTKKTINPMGGFVRYGNVKNDFML 323

Query: 191 VKGCVPGAKKNSWILVRDSF 210
           +KG +PG KK   + +R S 
Sbjct: 324 LKGSIPGVKKR-IVTIRKSL 342


>gi|212536953|ref|XP_002148632.1| 60S ribosomal protein L3 [Penicillium marneffei ATCC 18224]
 gi|210068374|gb|EEA22465.1| 60S ribosomal protein L3 [Penicillium marneffei ATCC 18224]
          Length = 392

 Score = 59.4 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 49/147 (33%), Gaps = 34/147 (23%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV  +T G GF+G   R     L          R     G    P  V    
Sbjct: 209 IFEQNEVIDVIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWTV 265

Query: 162 KMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLILV 191
             AG+MG +  T  N ++  +                              + K   ++V
Sbjct: 266 ARAGQMGYHHRTSVNHKIYRIGKGSDEGNASTEFDVSKKTITPLGGFVRYGEVKNDFVIV 325

Query: 192 KGCVPGAKKNSWILVRDSFKSAVNCKG 218
           KG VPG KK   + +R +    V+ K 
Sbjct: 326 KGSVPGVKKR-VMTLRKTLYPQVSRKA 351


>gi|328773128|gb|EGF83165.1| hypothetical protein BATDEDRAFT_29178 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 390

 Score = 59.4 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 47/140 (33%), Gaps = 34/140 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++D+ G+T G GF G + R     L          R     G    P RV   
Sbjct: 208 SIFEQDEMIDIIGITKGHGFEGVVARWGVKKLP--RKTHKGLRKVACIGAW-HPSRVQFA 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSVD---------DKRGL---------------------IL 190
              AG+ G +  T  N +V  V           +  L                     ++
Sbjct: 265 VPRAGQDGYHHRTEMNKKVYRVGKAGDKNSASTEFDLTTKDITPMGGFPHYGMINEDWLM 324

Query: 191 VKGCVPGAKKNSWILVRDSF 210
           +KG  PG +K   + +R S 
Sbjct: 325 IKGSCPGVRKR-VVTLRKSL 343


>gi|281500833|pdb|3JYW|C Chain C, Structure Of The 60s Proteins For Eukaryotic Ribosome
           Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome
           At 8.9a Resolution
          Length = 362

 Score = 59.4 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 47/140 (33%), Gaps = 34/140 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++D   +T G GF G   R     L          R     G    P  V  +
Sbjct: 203 SVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPAHVMWS 259

Query: 161 KKMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LIL 190
              AG+ G +  T  N ++  V   DD+                              I+
Sbjct: 260 VARAGQRGYHSRTSINHKIYRVGKGDDEANGATSFDRTKKTITPMGGFVHYGEIKNDFIM 319

Query: 191 VKGCVPGAKKNSWILVRDSF 210
           VKGC+PG +K   + +R S 
Sbjct: 320 VKGCIPGNRKR-IVTLRKSL 338


>gi|302915465|ref|XP_003051543.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256732482|gb|EEU45830.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 391

 Score = 59.4 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 43/130 (33%), Gaps = 33/130 (25%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GF+G   R     L          R     G    P  V   
Sbjct: 208 SIFEQDEMIDVIAVTKGHGFNGVTARWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LIL 190
              AG+MG +  T  N ++  +   D +                              ++
Sbjct: 265 VARAGQMGYHHRTSVNHKIYRIGKGDAEDNAATEIDVTKKTITPLGGFVRYGEVKNDFVM 324

Query: 191 VKGCVPGAKK 200
           +KG +PG KK
Sbjct: 325 LKGSIPGVKK 334


>gi|326475993|gb|EGE00003.1| 60S ribosomal protein L3 [Trichophyton tonsurans CBS 112818]
 gi|326485021|gb|EGE09031.1| 60S ribosomal protein L3 [Trichophyton equinum CBS 127.97]
          Length = 410

 Score = 59.0 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 35/152 (23%)

Query: 98  FSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGR 156
                 F   ++VDV  +T G GFSG   R     L          R     G    P  
Sbjct: 222 IDVDSVFEKDEVVDVIAVTKGHGFSGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSH 278

Query: 157 VFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------DDKR 186
           V      AG+ G +  T  N ++  +                              + K 
Sbjct: 279 VQWTVARAGQDGYHHRTSANHKIYRIGKADDEGNASTDFDVSKKRITPMGGFVRYGEVKN 338

Query: 187 GLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
             +++KG +PG +K   + +R +    V+ K 
Sbjct: 339 DYVMLKGSIPGVRKR-VVTLRKTLWPQVSRKA 369


>gi|49258841|pdb|1S1I|C Chain C, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From
           Yeast Obtained By Docking Atomic Models For Rna And
           Protein Components Into A 11.7 A Cryo-Em Map. This File,
           1s1i, Contains 60s Subunit. The 40s Ribosomal Subunit Is
           In File 1s1h
          Length = 386

 Score = 59.0 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 47/140 (33%), Gaps = 34/140 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++D   +T G GF G   R     L          R     G    P  V  +
Sbjct: 206 SVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPAHVMWS 262

Query: 161 KKMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LIL 190
              AG+ G +  T  N ++  V   DD+                              I+
Sbjct: 263 VARAGQRGYHSRTSINHKIYRVGKGDDEANGATSFDRTKKTITPMGGFVHYGEIKNDFIM 322

Query: 191 VKGCVPGAKKNSWILVRDSF 210
           VKGC+PG +K   + +R S 
Sbjct: 323 VKGCIPGNRKR-IVTLRKSL 341


>gi|115383888|ref|XP_001208491.1| 60S ribosomal protein L3 [Aspergillus terreus NIH2624]
 gi|114196183|gb|EAU37883.1| 60S ribosomal protein L3 [Aspergillus terreus NIH2624]
          Length = 395

 Score = 59.0 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 42/130 (32%), Gaps = 33/130 (25%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GF G   R     L          R     G    P  V   
Sbjct: 211 SIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPNHVQWT 267

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              AG+MG +  T  N +V  +                              + K   ++
Sbjct: 268 VARAGQMGYHHRTSCNHKVFRIGKGSDEGNASTDFDVSKKQITPMGGFVHYGEVKNDYVM 327

Query: 191 VKGCVPGAKK 200
           +KG +PG KK
Sbjct: 328 LKGSIPGVKK 337


>gi|6324637|ref|NP_014706.1| Rpl3p [Saccharomyces cerevisiae S288c]
 gi|2507307|sp|P14126|RL3_YEAST RecName: Full=60S ribosomal protein L3; AltName: Full=Maintenance
           of killer protein 8; AltName: Full=RP1; AltName:
           Full=Trichodermin resistance protein; AltName: Full=YL1
 gi|315113528|pdb|3O58|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit
           Of The First 80s In The Asymmetric Unit.
 gi|315113573|pdb|3O5H|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit
           Of The Second 80s In The Asymmetric Unit.
 gi|1420207|emb|CAA99256.1| TCM1 [Saccharomyces cerevisiae]
 gi|2104875|emb|CAA94548.1| YOR29-14 [Saccharomyces cerevisiae]
 gi|151945689|gb|EDN63930.1| ribosomal protein L3 [Saccharomyces cerevisiae YJM789]
 gi|190407398|gb|EDV10665.1| ribosomal protein L3 [Saccharomyces cerevisiae RM11-1a]
 gi|256269309|gb|EEU04617.1| Rpl3p [Saccharomyces cerevisiae JAY291]
 gi|259149545|emb|CAY86349.1| Rpl3p [Saccharomyces cerevisiae EC1118]
 gi|285814949|tpg|DAA10842.1| TPA: Rpl3p [Saccharomyces cerevisiae S288c]
 gi|323302848|gb|EGA56652.1| Rpl3p [Saccharomyces cerevisiae FostersB]
 gi|323307150|gb|EGA60433.1| Rpl3p [Saccharomyces cerevisiae FostersO]
 gi|323331453|gb|EGA72868.1| Rpl3p [Saccharomyces cerevisiae AWRI796]
 gi|323335592|gb|EGA76876.1| Rpl3p [Saccharomyces cerevisiae Vin13]
 gi|323346509|gb|EGA80796.1| Rpl3p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323352260|gb|EGA84796.1| Rpl3p [Saccharomyces cerevisiae VL3]
          Length = 387

 Score = 59.0 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 47/140 (33%), Gaps = 34/140 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++D   +T G GF G   R     L          R     G    P  V  +
Sbjct: 207 SVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPAHVMWS 263

Query: 161 KKMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LIL 190
              AG+ G +  T  N ++  V   DD+                              I+
Sbjct: 264 VARAGQRGYHSRTSINHKIYRVGKGDDEANGATSFDRTKKTITPMGGFVHYGEIKNDFIM 323

Query: 191 VKGCVPGAKKNSWILVRDSF 210
           VKGC+PG +K   + +R S 
Sbjct: 324 VKGCIPGNRKR-IVTLRKSL 342


>gi|156849033|ref|XP_001647397.1| hypothetical protein Kpol_1018p71 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156118083|gb|EDO19539.1| hypothetical protein Kpol_1018p71 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 387

 Score = 59.0 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 44/140 (31%), Gaps = 34/140 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GF G   R     L          R     G    P  V  +
Sbjct: 207 SVFEQNEMIDVVAVTKGHGFEGVTHRWGTKRLP--RKTHRGLRKVACIGPW-HPAHVMWS 263

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              AG+ G +  T  N +V  V                                    ++
Sbjct: 264 VARAGQRGYHHRTSINHKVYRVGKGEDEANAATSFDRTKKTINPMGGFVQYGMVNNDFVM 323

Query: 191 VKGCVPGAKKNSWILVRDSF 210
           VKG +PG KK   + +R S 
Sbjct: 324 VKGSIPGCKKR-VVTLRKSL 342


>gi|162605876|ref|XP_001713453.1| 60S ribosomal protein L3 [Guillardia theta]
 gi|13794385|gb|AAK39762.1|AF083031_119 60S ribosomal protein L3 [Guillardia theta]
          Length = 375

 Score = 59.0 bits (142), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 59/159 (37%), Gaps = 35/159 (22%)

Query: 94  VGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G   +    F+  +LVD+ G++ GKGF G + R     L          R     G   
Sbjct: 194 LGKKITIDQIFSENELVDIIGISKGKGFQGVVSRWGVTKLP--RKTHRGARKVACVGSW- 250

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------DDKRG------------- 187
            P RV      AG+ G +  T  N+++ ++            ++K               
Sbjct: 251 HPSRVSFTVARAGQSGYHHRTSLNIKIYAIGKDGFISNHILTNNKSNFSINPMGGFPFYG 310

Query: 188 -----LILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
                 +++KG + G+KK   IL R S     N K  ++
Sbjct: 311 LVKSDFLILKGGIVGSKKRGLIL-RKSIHKNKNFKENIN 348


>gi|327304004|ref|XP_003236694.1| 60S ribosomal protein L3 [Trichophyton rubrum CBS 118892]
 gi|326462036|gb|EGD87489.1| 60S ribosomal protein L3 [Trichophyton rubrum CBS 118892]
          Length = 459

 Score = 59.0 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 35/152 (23%)

Query: 98  FSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGR 156
                 F   ++VDV  +T G GFSG   R     L          R     G    P  
Sbjct: 271 IDVDSVFEKDEVVDVIAVTKGHGFSGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSH 327

Query: 157 VFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------DDKR 186
           V      AG+ G +  T  N ++  +                              + K 
Sbjct: 328 VQWTVARAGQDGYHHRTSANHKIYRIGKADDEGNASTDFDVSKKRITPMGGFVRYGEVKN 387

Query: 187 GLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
             +++KG +PG +K   + +R +    V+ K 
Sbjct: 388 DYVMLKGSIPGVRKR-VVTLRKTLWPQVSRKA 418


>gi|313103694|pdb|3IZC|C Chain C, Localization Of The Large Subunit Ribosomal Proteins Into
           A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
           Translating 80s Ribosome
 gi|315113303|pdb|3IZS|C Chain C, Localization Of The Large Subunit Ribosomal Proteins Into
           A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
           Translating 80s Ribosome
          Length = 388

 Score = 59.0 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 47/140 (33%), Gaps = 34/140 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++D   +T G GF G   R     L          R     G    P  V  +
Sbjct: 207 SVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPAHVMWS 263

Query: 161 KKMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LIL 190
              AG+ G +  T  N ++  V   DD+                              I+
Sbjct: 264 VARAGQRGYHSRTSINHKIYRVGKGDDEANGATSFDRTKKTITPMGGFVHYGEIKNDFIM 323

Query: 191 VKGCVPGAKKNSWILVRDSF 210
           VKGC+PG +K   + +R S 
Sbjct: 324 VKGCIPGNRKR-IVTLRKSL 342


>gi|254579294|ref|XP_002495633.1| ZYRO0B16082p [Zygosaccharomyces rouxii]
 gi|238938523|emb|CAR26700.1| ZYRO0B16082p [Zygosaccharomyces rouxii]
          Length = 388

 Score = 58.6 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 47/140 (33%), Gaps = 34/140 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G G+ G   R     L          R     G    P  V  +
Sbjct: 207 SVFEQNEMIDVAAVTKGHGYEGVTHRWGTTRLP--RKTHRGLRKVACIGAW-HPNHVMWS 263

Query: 161 KKMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LIL 190
              AG+ G +  T  N ++  V   DD+                              ++
Sbjct: 264 VARAGQNGFHHRTSINHKIYRVGKGDDEANAATEFDRTKKTINPMGGFPHYGEVKNDFVV 323

Query: 191 VKGCVPGAKKNSWILVRDSF 210
           +KG +PG KK   + +R S 
Sbjct: 324 IKGAIPGTKKR-VVTLRKSL 342


>gi|225563388|gb|EEH11667.1| large subunit ribosomal protein L3 [Ajellomyces capsulatus G186AR]
          Length = 552

 Score = 58.6 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 48/147 (32%), Gaps = 34/147 (23%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV  +T G GF+G   R     L          R     G    P  V    
Sbjct: 369 IFEKDEMIDVIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWTV 425

Query: 162 KMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLILV 191
             AG+ G +  T  N ++  +                              + K   +++
Sbjct: 426 ARAGQDGYHHRTSCNHKIYRIGKGSDEGNASTEFDVSKKQITPMGGFVRYGEVKNDYVMI 485

Query: 192 KGCVPGAKKNSWILVRDSFKSAVNCKG 218
           KG VPG KK   + +R +    V+ + 
Sbjct: 486 KGSVPGVKKR-VLTLRKTLYPQVSRRA 511


>gi|330039014|ref|XP_003239763.1| 60S ribosomal protein L3 [Cryptomonas paramecium]
 gi|327206688|gb|AEA38865.1| 60S ribosomal protein L3 [Cryptomonas paramecium]
          Length = 331

 Score = 58.6 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 4/90 (4%)

Query: 94  VGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           +G+  + +  F  G+ VD   +T GKGF+G ++R     L          R     G   
Sbjct: 147 LGNQVTVNTVFKDGEYVDTIAITKGKGFTGVVQRWGVTKLP--RKTRRGARKVACIGSW- 203

Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            P RV  +   AG+ G +  T  N++V  +
Sbjct: 204 HPSRVSYSVPRAGQKGYHHRTQSNIQVYKI 233


>gi|322705242|gb|EFY96829.1| 60S ribosomal protein L3 [Metarhizium anisopliae ARSEF 23]
          Length = 391

 Score = 58.6 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 42/129 (32%), Gaps = 33/129 (25%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV  +T G GF+G   R     L          R     G    P  V    
Sbjct: 209 IFEQDEMIDVIAVTKGHGFNGVTARWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWTV 265

Query: 162 KMAGRMGGNRVTVKNLEVVSV---DDK---------------------------RGLILV 191
             AG+MG +  T  N +V  +   D +                              ++V
Sbjct: 266 ARAGQMGYHHRTSVNHKVYRIGKGDAEDSASTEIDVTKKKITPLGGFVRYGEVNNDFVMV 325

Query: 192 KGCVPGAKK 200
           KG +PG KK
Sbjct: 326 KGSIPGVKK 334


>gi|242810586|ref|XP_002485611.1| 60S ribosomal protein L3 [Talaromyces stipitatus ATCC 10500]
 gi|218716236|gb|EED15658.1| 60S ribosomal protein L3 [Talaromyces stipitatus ATCC 10500]
          Length = 398

 Score = 58.6 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 49/147 (33%), Gaps = 34/147 (23%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV  +T G GF+G   R     L          R     G    P  V    
Sbjct: 215 IFEQNEVIDVIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPNHVQWTV 271

Query: 162 KMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLILV 191
             AG+MG +  T  N ++  +                              + K   ++V
Sbjct: 272 ARAGQMGYHHRTSVNHKIYRIGKGSDEGNASTEYDVSKKTITPLGGFVRYGEVKNDFVIV 331

Query: 192 KGCVPGAKKNSWILVRDSFKSAVNCKG 218
           KG VPG KK   + +R +    V+ K 
Sbjct: 332 KGSVPGVKKR-VMTLRKTLYPQVSRKA 357


>gi|226329479|ref|ZP_03804997.1| hypothetical protein PROPEN_03388 [Proteus penneri ATCC 35198]
 gi|225202665|gb|EEG85019.1| hypothetical protein PROPEN_03388 [Proteus penneri ATCC 35198]
          Length = 53

 Score = 58.6 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 2/33 (6%)

Query: 3  SGVVARKLGMTCVYNIEGRRIPVTVLHLD--NC 33
           G+V +K+GMT ++  +G  IPVTV+ ++   C
Sbjct: 2  IGLVGKKVGMTRIFTEDGVSIPVTVIEIEKQPC 34


>gi|302697183|ref|XP_003038270.1| hypothetical protein SCHCODRAFT_80517 [Schizophyllum commune H4-8]
 gi|300111967|gb|EFJ03368.1| hypothetical protein SCHCODRAFT_80517 [Schizophyllum commune H4-8]
          Length = 421

 Score = 58.6 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 45/140 (32%), Gaps = 34/140 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   + VD+  +T G GF G   R     L          R     G    P +V  +
Sbjct: 241 SVFEQDECVDIIAVTKGHGFEGVTHRWGTKKLP--RKTHKGLRKVACIGAW-HPSKVMYS 297

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              AG+ G +  T  N ++  V                                K   ++
Sbjct: 298 VARAGQNGYHHRTEINKKIYRVGLGSDDGNASTEHDITKKAITPMGGFPHYGIVKNDYLM 357

Query: 191 VKGCVPGAKKNSWILVRDSF 210
           +KG +PG KK   I +R S 
Sbjct: 358 LKGSIPGTKKR-IITIRKSL 376


>gi|116204627|ref|XP_001228124.1| 60S ribosomal protein L3 [Chaetomium globosum CBS 148.51]
 gi|88176325|gb|EAQ83793.1| 60S ribosomal protein L3 [Chaetomium globosum CBS 148.51]
          Length = 392

 Score = 58.6 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 42/130 (32%), Gaps = 33/130 (25%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GFSG   R     L          R     G    P  V   
Sbjct: 208 SIFEKDEMIDVIAVTKGHGFSGVTARWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              AG+MG +  T  N +V  +                              +     ++
Sbjct: 265 VARAGQMGYHHRTSVNHKVYRIGKGDADDSAATEIDVTKKKITPMGGFVRYGEVNNDFVM 324

Query: 191 VKGCVPGAKK 200
           VKG VPG KK
Sbjct: 325 VKGSVPGVKK 334


>gi|50288047|ref|XP_446452.1| hypothetical protein [Candida glabrata CBS 138]
 gi|74661344|sp|Q6FTJ2|RL3_CANGA RecName: Full=60S ribosomal protein L3
 gi|49525760|emb|CAG59379.1| unnamed protein product [Candida glabrata]
          Length = 387

 Score = 58.2 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 46/140 (32%), Gaps = 34/140 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++D   +T G GF G   R     L          R     G    P  V  +
Sbjct: 207 SVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPAHVMWS 263

Query: 161 KKMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LIL 190
              AG+ G +  T  N ++  +   DD+                              ++
Sbjct: 264 VARAGQRGYHHRTSINHKIYRIGKGDDEGNAATNFDRTKKTINPMGGFVHYGMVNNDFVM 323

Query: 191 VKGCVPGAKKNSWILVRDSF 210
           VKG +PG KK   + +R S 
Sbjct: 324 VKGSIPGCKKR-VVTLRKSL 342


>gi|296812079|ref|XP_002846377.1| 60S ribosomal protein L3 [Arthroderma otae CBS 113480]
 gi|238841633|gb|EEQ31295.1| 60S ribosomal protein L3 [Arthroderma otae CBS 113480]
          Length = 458

 Score = 58.2 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 35/152 (23%)

Query: 98  FSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGR 156
                 F   ++VDV  +T G GFSG   R     L          R     G    P  
Sbjct: 270 IDVDTVFEKDEVVDVIAVTKGHGFSGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSH 326

Query: 157 VFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------DDKR 186
           V      AG+ G +  T  N ++  +                              + K 
Sbjct: 327 VQWTVARAGQDGYHHRTSANHKIYRIGKAGDEGNASTDFDVSKKQITPMGGFVRYGEVKN 386

Query: 187 GLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
             +++KG +PG +K   + +R +    V+ K 
Sbjct: 387 DFVMLKGSIPGVRKR-VVTLRKTLWPQVSRKA 417


>gi|310771890|emb|CBH28886.1| 60S RIBOSOMAL PROTEIN L3 [Anncaliia algerae]
          Length = 381

 Score = 58.2 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 45/128 (35%), Gaps = 31/128 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F    L+DV G+T GKGF+G  KR     L      +   R     G    P  V  +
Sbjct: 205 DVFGENDLIDVIGVTKGKGFNGVTKRFGTKILP--RKTNKGKRKVACIGAW-HPANVLYS 261

Query: 161 KKMAGRMGGNRVTVKNLEVVS-------VDDKRGL---------------------ILVK 192
              AG++G +R T  N  V         +  +  L                     I++K
Sbjct: 262 VPRAGQLGFHRRTEYNKMVYKLGNGKQSIKTEYDLTEKTVNPMGGFPHYGCVSNDFIMIK 321

Query: 193 GCVPGAKK 200
           G  PG +K
Sbjct: 322 GSCPGPRK 329


>gi|330805639|ref|XP_003290787.1| 60S ribosomal protein L3 [Dictyostelium purpureum]
 gi|325079065|gb|EGC32684.1| 60S ribosomal protein L3 [Dictyostelium purpureum]
          Length = 399

 Score = 58.2 bits (140), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 48/137 (35%), Gaps = 38/137 (27%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F+  +++DV G+T GKGF+G +KR     L          R     G    P RV    
Sbjct: 211 VFSENEMIDVIGVTKGKGFNGVIKRWGVRKLP--RKTHKGLRKVACIGAW-HPSRVSTTV 267

Query: 162 KMAGRMGGNRVTVKNLEVVSVD-----------------------------------DKR 186
             AG++G +    +N ++  +                                      +
Sbjct: 268 PRAGQLGYHHRVERNKKIYRIGQAQPVEGKQISTGKTEFDLTEKTINPMGGFTHYGVVDQ 327

Query: 187 GLILVKGCVPGAKKNSW 203
             I+VKGCV G +K + 
Sbjct: 328 DFIMVKGCVAGPRKRAL 344


>gi|238601436|ref|XP_002395411.1| hypothetical protein MPER_04539 [Moniliophthora perniciosa FA553]
 gi|215466097|gb|EEB96341.1| hypothetical protein MPER_04539 [Moniliophthora perniciosa FA553]
          Length = 219

 Score = 57.9 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 45/140 (32%), Gaps = 34/140 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   + +DV  +T G GF G   R     L          R     G    P +V  +
Sbjct: 39  SVFEQDENIDVIAVTKGHGFEGVTHRWGTKKLP--RKTHKGLRKVACIGAW-HPSKVMFS 95

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              AG+ G +  T  N ++  +                                K   ++
Sbjct: 96  VARAGQSGYHHRTELNKKIYRIGSGSDEGNASTEHDISKKPITPMGGFPHYGIVKNDFLM 155

Query: 191 VKGCVPGAKKNSWILVRDSF 210
           +KG +PG KK   I +R S 
Sbjct: 156 LKGSIPGTKKR-VITIRKSL 174


>gi|258565167|ref|XP_002583328.1| 60S ribosomal protein L3 [Uncinocarpus reesii 1704]
 gi|237907029|gb|EEP81430.1| 60S ribosomal protein L3 [Uncinocarpus reesii 1704]
          Length = 383

 Score = 57.9 bits (139), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 47/148 (31%), Gaps = 34/148 (22%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GF G   R     L          R     G    P  V   
Sbjct: 199 SIFEQDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 255

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              AG+ G +  T  N ++  +                              + K   ++
Sbjct: 256 VARAGQDGYHHRTSVNHKIYRIGKGSDEGNASTDFDVSKKQITPMGGFVRYGEVKNDFLI 315

Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           +KG  PG KK   + +R +    V+ K 
Sbjct: 316 IKGSCPGVKKR-VLTLRKTLYPQVSRKA 342


>gi|255717332|ref|XP_002554947.1| KLTH0F17556p [Lachancea thermotolerans]
 gi|238936330|emb|CAR24510.1| KLTH0F17556p [Lachancea thermotolerans]
          Length = 388

 Score = 57.9 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 45/140 (32%), Gaps = 34/140 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GF G   R     L          R     G    P  V  +
Sbjct: 207 SVFEQNEMIDVCAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPAHVMWS 263

Query: 161 KKMAGRMGGNRVTVKNLEVVSVD------------------------------DKRGLIL 190
              AG+ G +  T  N +V  V                                    ++
Sbjct: 264 VARAGQRGFHTRTSINHKVYRVGKGGDEGNASTEFDRTKKSITPMGGFVQYGPVNNDFVM 323

Query: 191 VKGCVPGAKKNSWILVRDSF 210
           VKGC+PG +K   + +R S 
Sbjct: 324 VKGCIPGNRKR-VVTLRKSL 342


>gi|154422961|ref|XP_001584492.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121918739|gb|EAY23506.1| hypothetical protein TVAG_071700 [Trichomonas vaginalis G3]
          Length = 415

 Score = 57.9 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 50/157 (31%), Gaps = 8/157 (5%)

Query: 26  TVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV 85
           TV+ +              G  A + GA +    N     +     + ++      +   
Sbjct: 155 TVIRVIAH--TQSAKTTTRGVDANEQGAKKVLKGNHLGQKKAHMIEIQINGGDVAAKLNY 212

Query: 86  QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145
            K      +        FT G+ +D  G+  G G+ G + R+    L+         R  
Sbjct: 213 AKSILEKEIK---VADVFTEGEQIDTIGVGKGFGWEGVIHRYGTKRLQ--KKTHRGRRKV 267

Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
              G   +P RV  +    G+ G +  T  N  +  +
Sbjct: 268 ACIGPW-NPARVLWSVARYGQRGCHHRTEMNKRIYRI 303


>gi|123495590|ref|XP_001326781.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121909700|gb|EAY14558.1| hypothetical protein TVAG_388910 [Trichomonas vaginalis G3]
          Length = 415

 Score = 57.9 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 49/157 (31%), Gaps = 8/157 (5%)

Query: 26  TVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV 85
           TV+ +              G  A + GA +    N     +       ++      +   
Sbjct: 155 TVIRVIAH--TQSAKTTTRGVDANEQGAKKVLKGNHLGQKKAHMIENQINGGDVAAKLNY 212

Query: 86  QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145
            K      +        FT G+ +D  G+  G G+ G + R+    L+         R  
Sbjct: 213 AKSILEKEIK---VADVFTEGEQIDTIGVGKGFGWEGVIHRYGTKRLQ--KKTHRGRRKV 267

Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
              G   +P RV  +    G+ G +  T  N  +  +
Sbjct: 268 ACIGPW-NPARVLWSVARYGQRGCHHRTEMNKRIYRI 303


>gi|46123823|ref|XP_386465.1| RL3_NEUCR 60S ribosomal protein L3 [Gibberella zeae PH-1]
          Length = 378

 Score = 57.9 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 42/130 (32%), Gaps = 33/130 (25%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GF+G   R     L          R     G    P  V   
Sbjct: 195 SIFEQDEMIDVVAVTKGHGFNGVTARWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 251

Query: 161 KKMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LIL 190
              AG+MG +  T  N ++  +   D                                ++
Sbjct: 252 VARAGQMGYHHRTSVNHKIYRIGKGDADDNAATEIDVTKKTITPLGGFVRYGEVKNDFVM 311

Query: 191 VKGCVPGAKK 200
           +KG +PG KK
Sbjct: 312 LKGSIPGVKK 321


>gi|123440132|ref|XP_001310830.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|123470017|ref|XP_001318217.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|154419020|ref|XP_001582527.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121892616|gb|EAX97900.1| hypothetical protein TVAG_059650 [Trichomonas vaginalis G3]
 gi|121900970|gb|EAY05994.1| hypothetical protein TVAG_124190 [Trichomonas vaginalis G3]
 gi|121916763|gb|EAY21541.1| hypothetical protein TVAG_013060 [Trichomonas vaginalis G3]
          Length = 415

 Score = 57.9 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 50/157 (31%), Gaps = 8/157 (5%)

Query: 26  TVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV 85
           TV+ +              G  A + GA +    N     +     + ++      +   
Sbjct: 155 TVIRVIAH--TQSAKTTTRGVDANEQGAKKVLKGNHLGQKKAHMIEIQINGGDVAAKLNY 212

Query: 86  QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145
            K      +        FT G+ +D  G+  G G+ G + R+    L+         R  
Sbjct: 213 AKSILEKEIK---VADVFTEGEQIDTIGVGKGFGWEGVIHRYGTKRLQ--KKTHRGRRKV 267

Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
              G   +P RV  +    G+ G +  T  N  +  +
Sbjct: 268 ACIGPW-NPARVLWSVARYGQRGCHHRTEMNKRIYRI 303


>gi|154301761|ref|XP_001551292.1| 60S ribosomal protein L3 [Botryotinia fuckeliana B05.10]
 gi|150855694|gb|EDN30886.1| 60S ribosomal protein L3 [Botryotinia fuckeliana B05.10]
          Length = 392

 Score = 57.5 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 51/168 (30%), Gaps = 36/168 (21%)

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K  +     + V+      +          PV    S S F   +++DV  +T G GFSG
Sbjct: 173 KQKKAHLMEIQVNGGSVAEKVDFASGLFEKPV--EIS-SIFEQDEMIDVIAVTKGHGFSG 229

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
              R     L          R     G    P  V      AG+ G +  T  N +V  +
Sbjct: 230 VTSRWGTKKLP--RKTHKGLRKVACIGAW-HPAHVQWTVARAGQDGYHHRTSCNHKVYRI 286

Query: 183 ------------------------------DDKRGLILVKGCVPGAKK 200
                                         + K   I++KG VPG KK
Sbjct: 287 GRGDDPNNAATEFDVSKKAITPMGGFVRYGEVKNDFIMLKGSVPGVKK 334


>gi|315051194|ref|XP_003174971.1| 60S ribosomal protein L3 [Arthroderma gypseum CBS 118893]
 gi|311340286|gb|EFQ99488.1| 60S ribosomal protein L3 [Arthroderma gypseum CBS 118893]
          Length = 412

 Score = 57.5 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 35/152 (23%)

Query: 98  FSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGR 156
                 F   ++VDV  +T G GFSG   R     L          R     G    P  
Sbjct: 224 IDVDSVFEKDEVVDVIAVTKGHGFSGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSH 280

Query: 157 VFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------DDKR 186
           V      AG+ G +  T  N ++  +                              + K 
Sbjct: 281 VQWTVARAGQDGYHHRTSANHKIYRIGKADDEGNASTDFDVSKKRITPMGGFVRYGEVKN 340

Query: 187 GLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
             +++KG +PG +K   + +R +    V+ K 
Sbjct: 341 DYVMLKGSIPGVRKR-VVTLRKTLWPQVSRKA 371


>gi|123445156|ref|XP_001311341.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121893146|gb|EAX98411.1| hypothetical protein TVAG_125550 [Trichomonas vaginalis G3]
          Length = 415

 Score = 57.5 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 50/157 (31%), Gaps = 8/157 (5%)

Query: 26  TVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV 85
           TV+ +              G  A + GA +    N     +     + ++      +   
Sbjct: 155 TVIRVIAH--TQSAKTTTRGVDANEQGAKKVLKGNHLGQKKAHMIEIQINGGDVAAKLNY 212

Query: 86  QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145
            K      +        FT G+ +D  G+  G G+ G + R+    L+         R  
Sbjct: 213 AKSILEKEIK---VADVFTEGEQIDTIGVGKGFGWEGVIHRYGTKRLQ--KKTHRGRRKV 267

Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
              G   +P RV  +    G+ G +  T  N  +  +
Sbjct: 268 ACIGPW-NPARVLWSVARYGQRGCHHRTEMNKRIYRI 303


>gi|73973630|ref|XP_868296.1| PREDICTED: similar to ribosomal protein L3 isoform 5 [Canis
           familiaris]
          Length = 354

 Score = 57.5 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 67/203 (33%), Gaps = 31/203 (15%)

Query: 3   SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
           +  +  K GMT +    +  G ++        VT++      VV        GY+    G
Sbjct: 44  TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIV-----GYVETPRG 98

Query: 53  ---AGEAKVKNVSKPMRGFFSS--VNVSPKKKLFEFRVQKDDDLLPV--------GSVFS 99
                    +++S   +  F         K  L E +V        +          V  
Sbjct: 99  LRTFKTIFAEHISDECKRRFYKNWHKSKKKAHLMEIQVNGGTVAEKLDWARERLEQQVPV 158

Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
              F   +++DV G+T GKG+ G   R +   L          R     G    P RV  
Sbjct: 159 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAF 215

Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182
           +   AG+ G +  T  N ++  +
Sbjct: 216 SMARAGQKGYHHRTEINKKIYKI 238


>gi|320583084|gb|EFW97300.1| 60S ribosomal protein L3 [Pichia angusta DL-1]
          Length = 389

 Score = 57.5 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 44/148 (29%), Gaps = 34/148 (22%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GF G   R     L          R     G    P  V   
Sbjct: 207 SVFEQNEMIDVIAVTKGHGFEGVTHRWGTKKLP--RKTHRGTRKVACIGAW-HPSHVMWT 263

Query: 161 KKMAGRMGGNRVTVKNLEVVSVD------------------------------DKRGLIL 190
              AG+ G +  T  N +V  +                                    +L
Sbjct: 264 VARAGQRGYHHRTSINHKVYRIGKAGDEASGATEFDRTKKTITPMGGFVRYGAVNNDFVL 323

Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           +KG +PG  K   I +R S     N + 
Sbjct: 324 LKGSIPGPVKR-VITLRKSLYGPTNRRA 350


>gi|169861488|ref|XP_001837378.1| 60S ribosomal protein L3 [Coprinopsis cinerea okayama7#130]
 gi|116501399|gb|EAU84294.1| 60S ribosomal protein L3 [Coprinopsis cinerea okayama7#130]
          Length = 388

 Score = 57.5 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 43/140 (30%), Gaps = 34/140 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   + VDV  +T G GF G   R     L          R     G       +F  
Sbjct: 208 SVFEQDENVDVIAVTKGHGFEGVTHRWGTKKLP--RKTHKGLRKVACIGAWHPSNVMFS- 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSVD------------------------------DKRGLIL 190
              AG+ G +  T  N ++  +                                K   +L
Sbjct: 265 VARAGQNGYHHRTEINKKIYRIGLGSDDGNASTESDITKKVITPLGGFPHYGVVKNDFLL 324

Query: 191 VKGCVPGAKKNSWILVRDSF 210
           VKG +PG KK   I +R S 
Sbjct: 325 VKGSIPGTKKR-VITIRKSL 343


>gi|327349122|gb|EGE77979.1| hypothetical protein BDDG_00916 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 392

 Score = 57.1 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 49/148 (33%), Gaps = 34/148 (22%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GF+G   R     L          R     G    P  V   
Sbjct: 208 SVFEKDEMIDVIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              AG+ G +  T  N ++  +                              + K   ++
Sbjct: 265 VARAGQDGYHHRTSCNHKIYRIGKGSDEGNASTEFDVSKKQITPMGGFVRYGEVKNDYVM 324

Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           +KG VPG KK   + +R +    V+ K 
Sbjct: 325 IKGSVPGVKKR-VLTLRKTLYPQVSRKA 351


>gi|322695627|gb|EFY87432.1| 60S ribosomal protein L3 [Metarhizium acridum CQMa 102]
          Length = 391

 Score = 57.1 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 42/129 (32%), Gaps = 33/129 (25%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV  +T G GF+G   R     L          R     G    P  V    
Sbjct: 209 IFEQDEMIDVIAVTKGHGFNGVTARWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWTV 265

Query: 162 KMAGRMGGNRVTVKNLEVVSV---DDK---------------------------RGLILV 191
             AG+MG +  T  N +V  +   D +                              +++
Sbjct: 266 ARAGQMGYHHRTSVNHKVYRIGKGDAEDSASTEVDVTKKKITPLGGFVRYGEVNNDFVML 325

Query: 192 KGCVPGAKK 200
           KG +PG KK
Sbjct: 326 KGSIPGVKK 334


>gi|312215801|emb|CBX95753.1| similar to 60S ribosomal protein L3 [Leptosphaeria maculans]
          Length = 392

 Score = 57.1 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 43/130 (33%), Gaps = 33/130 (25%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T GKG++G   R     L          R     G    P  V   
Sbjct: 208 SIFEANEMIDVIAVTKGKGYNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPAHVQWT 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              AG+MG +  T  N ++  +                              + K   +L
Sbjct: 265 VARAGQMGYHHRTSVNHKIYRIGKGEDEGNASTEFDVSKKQITPMGGFVRYGEVKNDFLL 324

Query: 191 VKGCVPGAKK 200
           +KG  PG KK
Sbjct: 325 LKGNCPGVKK 334


>gi|156065829|ref|XP_001598836.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
 gi|154691784|gb|EDN91522.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 392

 Score = 57.1 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 42/130 (32%), Gaps = 33/130 (25%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GFSG   R     L          R     G    P  V   
Sbjct: 208 SIFEQDEMIDVIAVTKGHGFSGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPAHVQWT 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              AG+ G +  T  N +V  +                              + K   I+
Sbjct: 265 VARAGQDGYHHRTSCNHKVYRIGRGDDPNNAATEFDVSKKAITPMGGFVRYGEVKNDYIM 324

Query: 191 VKGCVPGAKK 200
           +KG VPG KK
Sbjct: 325 LKGSVPGVKK 334


>gi|310794485|gb|EFQ29946.1| ribosomal protein L3 [Glomerella graminicola M1.001]
          Length = 391

 Score = 57.1 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 42/130 (32%), Gaps = 33/130 (25%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G G++G   R     L          R     G    P  V   
Sbjct: 208 SIFEQNEMIDVIAVTTGHGYNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LIL 190
              AG+MG +  T  N +V  +   D                                ++
Sbjct: 265 VARAGQMGYHHRTSVNHKVYRIGKGDADDNASTDVDVTKKTITPLGGFVRYGEVKNDFVM 324

Query: 191 VKGCVPGAKK 200
           VKG +PG KK
Sbjct: 325 VKGSIPGTKK 334


>gi|76496472|ref|NP_001029025.1| 60S ribosomal protein L3 isoform b [Homo sapiens]
          Length = 354

 Score = 57.1 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 67/203 (33%), Gaps = 31/203 (15%)

Query: 3   SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
           +  +  K GMT +    +  G ++        VT++      VV        GY+    G
Sbjct: 44  TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIV-----GYVETPRG 98

Query: 53  ---AGEAKVKNVSKPMRGFFSS--VNVSPKKKLFEFRVQKDDDLLPV--------GSVFS 99
                    +++S   +  F         K  L E +V        +          V  
Sbjct: 99  LRTFKTVFAEHISDECKRRFYKNWHKSKKKAHLMEIQVNGGTVAEKLDWARERLEQQVPV 158

Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
              F   +++DV G+T GKG+ G   R +   L          R     G    P RV  
Sbjct: 159 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAF 215

Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182
           +   AG+ G +  T  N ++  +
Sbjct: 216 SVARAGQKGYHHRTEINKKIYKI 238


>gi|261195566|ref|XP_002624187.1| 60S ribosomal protein L3 [Ajellomyces dermatitidis SLH14081]
 gi|239588059|gb|EEQ70702.1| 60S ribosomal protein L3 [Ajellomyces dermatitidis SLH14081]
 gi|239610450|gb|EEQ87437.1| 60S ribosomal protein L3 [Ajellomyces dermatitidis ER-3]
          Length = 346

 Score = 57.1 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 49/148 (33%), Gaps = 34/148 (22%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GF+G   R     L          R     G    P  V   
Sbjct: 162 SVFEKDEMIDVIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 218

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              AG+ G +  T  N ++  +                              + K   ++
Sbjct: 219 VARAGQDGYHHRTSCNHKIYRIGKGSDEGNASTEFDVSKKQITPMGGFVRYGEVKNDYVM 278

Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           +KG VPG KK   + +R +    V+ K 
Sbjct: 279 IKGSVPGVKKR-VLTLRKTLYPQVSRKA 305


>gi|193787392|dbj|BAG52598.1| unnamed protein product [Homo sapiens]
          Length = 354

 Score = 57.1 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 67/203 (33%), Gaps = 31/203 (15%)

Query: 3   SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
           +  +  K GMT +    +  G ++        VT++      VV        GY+    G
Sbjct: 44  TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIV-----GYVETPRG 98

Query: 53  ---AGEAKVKNVSKPMRGFFSS--VNVSPKKKLFEFRVQKDDDLLPV--------GSVFS 99
                    +++S   +  F         K  L E +V        +          V  
Sbjct: 99  LRTFKTVFAEHISDECKRRFYKNWHKSKKKAHLMEIQVNGGTVAEKLDWARERLEQQVPV 158

Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
              F   +++DV G+T GKG+ G   R +   L          R     G    P RV  
Sbjct: 159 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVARIGAW-HPARVAF 215

Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182
           +   AG+ G +  T  N ++  +
Sbjct: 216 SVARAGQKGYHHRTEINKKIYKI 238


>gi|66802278|ref|XP_629921.1| 60S ribosomal protein L3 [Dictyostelium discoideum AX4]
 gi|464637|sp|P34113|RL3_DICDI RecName: Full=60S ribosomal protein L3
 gi|167816|gb|AAA99508.1| ribosomal protein [Dictyostelium discoideum]
 gi|60463269|gb|EAL61461.1| 60S ribosomal protein L3 [Dictyostelium discoideum AX4]
          Length = 398

 Score = 56.7 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 47/137 (34%), Gaps = 38/137 (27%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +L+DV G+T GKGF+G +KR     L          R     G    P RV    
Sbjct: 211 VFAENELIDVIGVTKGKGFNGVIKRWGVRKLP--RKTHKGLRKVACIGAW-HPSRVSTTV 267

Query: 162 KMAGRMGGNRVTVKNLEVVSV-----------------------------------DDKR 186
             AG++G +    +N ++  +                                     K 
Sbjct: 268 PRAGQLGYHHRVERNKKIYRIGQAQPEDGKQISTGKTEFDLTEKTINPMGGFAHYGMVKH 327

Query: 187 GLILVKGCVPGAKKNSW 203
             +++KGCV G +K + 
Sbjct: 328 EFLMLKGCVAGPRKRAL 344


>gi|296236923|ref|XP_002763539.1| PREDICTED: 60S ribosomal protein L3-like isoform 2 [Callithrix
           jacchus]
          Length = 354

 Score = 56.7 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 67/203 (33%), Gaps = 31/203 (15%)

Query: 3   SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
           +  +  K GMT +    +  G ++        VT++      VV        GY+    G
Sbjct: 44  TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIV-----GYVETPRG 98

Query: 53  ---AGEAKVKNVSKPMRGFFSS--VNVSPKKKLFEFRVQKDDDLLPV--------GSVFS 99
                    +++S   +  F         K  L E +V        +          V  
Sbjct: 99  LRTFKTVFAEHISDECKRRFYKNWHKSKKKAHLMEIQVNGGTVSEKLDWARERLEQQVPV 158

Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
              F   +++DV G+T GKG+ G   R +   L          R     G    P RV  
Sbjct: 159 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAF 215

Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182
           +   AG+ G +  T  N ++  +
Sbjct: 216 SVARAGQKGYHHRTEINKKIYKI 238


>gi|261327490|emb|CBH10465.1| ribosomal protein L3, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 480

 Score = 56.7 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 74/305 (24%), Gaps = 105/305 (34%)

Query: 6   VARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH----------------- 38
           +  K GMT +    +  G ++       PVT+L      VV                   
Sbjct: 98  MVYKAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVW 157

Query: 39  ---------RTLDKNGYMAVQVGAGEAK-----------VKNVSKPMRG----------- 67
                    R   KN   + Q+   + K                K               
Sbjct: 158 AHHTSVEFRRRFYKNWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFEKKADIIRVVAHT 217

Query: 68  FFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP------------SYFTVGQLVDVTGMT 115
               +  +          +   +   +                  S F   +  DV  +T
Sbjct: 218 QLRKLRNNRVGVKKAHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAVT 277

Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
            G GF+G +KR     L          R     G    P RV      AG+ G +  T  
Sbjct: 278 KGHGFTGVVKRWGVACLP--RKTHRGLRKVACIGAW-HPSRVMYTVARAGQHGYHHRTHL 334

Query: 176 NLEVVSVD--------------------------------DKRGLILVKGCVPGAKKNSW 203
           N ++  +                                  +   +++KG V G ++   
Sbjct: 335 NKKIYQLGRAVSMEPNQATTAYDLTAKTITPMGGFVGYGTVRNDYVMLKGSVAGPRRRVI 394

Query: 204 ILVRD 208
            L R 
Sbjct: 395 TLRRP 399


>gi|242219392|ref|XP_002475476.1| 60S ribosomal protein L3 [Postia placenta Mad-698-R]
 gi|220725335|gb|EED79327.1| 60S ribosomal protein L3 [Postia placenta Mad-698-R]
          Length = 388

 Score = 56.7 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 45/139 (32%), Gaps = 34/139 (24%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   ++VDV  +T G GF G   R     L          R     G    P +V  + 
Sbjct: 209 VFEQDEVVDVIAVTKGHGFEGVTHRWGTKKLP--RKTHKGLRKVACIGAW-HPSKVMFSV 265

Query: 162 KMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLILV 191
             AG+ G +  T  N ++  +                                K   +++
Sbjct: 266 ARAGQNGYHHRTELNKKIYRIGSGEDTGNASTEHDITKKVITPMGGFPHYGIVKNDYLML 325

Query: 192 KGCVPGAKKNSWILVRDSF 210
           KG +PG KK   I +R S 
Sbjct: 326 KGSIPGTKKR-VITIRKSL 343


>gi|331233068|ref|XP_003329195.1| 60S ribosomal protein L3 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309308185|gb|EFP84776.1| 60S ribosomal protein L3 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 388

 Score = 56.7 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 45/140 (32%), Gaps = 34/140 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   + +DV  +T GKG+ G   R     L          R     G    P +V   
Sbjct: 208 SVFEQNENIDVIAVTKGKGYEGVTHRWGCKKLP--RKTHKGLRKVACIGAW-HPSKVMFT 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSVD------------------------------DKRGLIL 190
              AG+ G +  T  N +V  V                                K   ++
Sbjct: 265 VARAGQDGYHHRTELNKKVFRVGKGGDEANATTEFDTTTKAITPMGGFVRYGVVKNDFLM 324

Query: 191 VKGCVPGAKKNSWILVRDSF 210
           +KG VPG KK   I +R S 
Sbjct: 325 LKGSVPGVKKR-VITLRKSL 343


>gi|209875731|ref|XP_002139308.1| 60S ribosomal protein L3 [Cryptosporidium muris RN66]
 gi|209554914|gb|EEA04959.1| 60S ribosomal protein L3, putative [Cryptosporidium muris RN66]
          Length = 390

 Score = 56.7 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F+  +++DV G++ GKG+ G + R     L          R     G    P RV   
Sbjct: 206 SIFSENEMIDVIGISKGKGYKGVISRWGVTKLP--RKTRRGVRKVSCIGAW-HPARVQFQ 262

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G  + T  N ++  +
Sbjct: 263 VPRAGQKGYGQRTEMNKKIYRI 284


>gi|72387810|ref|XP_844329.1| ribosomal protein L3 [Trypanosoma brucei TREU927]
 gi|62359480|gb|AAX79917.1| ribosomal protein L3, putative [Trypanosoma brucei]
 gi|70800862|gb|AAZ10770.1| ribosomal protein L3, putative [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 480

 Score = 56.7 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 74/305 (24%), Gaps = 105/305 (34%)

Query: 6   VARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH----------------- 38
           +  K GMT +    +  G ++       PVT+L      VV                   
Sbjct: 98  MVYKAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVW 157

Query: 39  ---------RTLDKNGYMAVQVGAGEAK-----------VKNVSKPMRG----------- 67
                    R   KN   + Q+   + K                K               
Sbjct: 158 AHHTSVEFRRRFYKNWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFEKKADIIRVVAHT 217

Query: 68  FFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP------------SYFTVGQLVDVTGMT 115
               +  +          +   +   +                  S F   +  DV  +T
Sbjct: 218 QLRKLRNNRVGVKKAHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAVT 277

Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
            G GF+G +KR     L          R     G    P RV      AG+ G +  T  
Sbjct: 278 KGHGFTGVVKRWGVACLP--RKTHRGLRKVACIGAW-HPSRVMYTVARAGQHGYHHRTHL 334

Query: 176 NLEVVSVD--------------------------------DKRGLILVKGCVPGAKKNSW 203
           N ++  +                                  +   +++KG V G ++   
Sbjct: 335 NKKIYQLGRAVSMEPNQATTAYDLTAKTITPMGGFVGYGTVRNDYVMLKGSVAGPRRRVI 394

Query: 204 ILVRD 208
            L R 
Sbjct: 395 TLRRP 399


>gi|71652016|ref|XP_814673.1| ribosomal protein L3 [Trypanosoma cruzi strain CL Brener]
 gi|71652018|ref|XP_814674.1| ribosomal protein L3 [Trypanosoma cruzi strain CL Brener]
 gi|70879667|gb|EAN92822.1| ribosomal protein L3, putative [Trypanosoma cruzi]
 gi|70879668|gb|EAN92823.1| ribosomal protein L3, putative [Trypanosoma cruzi]
          Length = 428

 Score = 56.7 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/302 (15%), Positives = 82/302 (27%), Gaps = 105/302 (34%)

Query: 9   KLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------------- 38
           K GMT +    +  G ++       PVT+L      VV                      
Sbjct: 50  KAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHH 109

Query: 39  ------RTLDKNGYMAVQVGAGEAKVKNVS--------KPMRGFFSSVNV---------- 74
                 R   KN   + Q+   + K    +        + ++ F    ++          
Sbjct: 110 TSVEFRRRFYKNWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFAKKADIIRVVAHTQLR 169

Query: 75  --------SPKKKLFEFRVQKD--DDLLPVGSVFSP------SYFTVGQLVDVTGMTIGK 118
                     K  + E ++      + + +            S F   +  DV  +T G 
Sbjct: 170 KLRNNRVGVKKAHVSEIQINGGTIAEKIELAKSLLEKEVRIDSIFQQSETCDVCAVTKGH 229

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF+G +KR     L          R     G    P RV      AG+ G +  T  N +
Sbjct: 230 GFTGVVKRWGVACLP--RKTHRGLRKVACIGAW-HPARVMYTVARAGQHGYHHRTHLNKK 286

Query: 179 VVSVD--------------------------------DKRGLILVKGCVPGAKKNSWILV 206
           +  +                                  +   I++KG V G ++    L 
Sbjct: 287 IYQLGRAVSMEPNQATTTYDLTAKSITPMGGFVGYGTVRNDYIMLKGSVAGPRRRVITLR 346

Query: 207 RD 208
           R 
Sbjct: 347 RP 348


>gi|149240189|ref|XP_001525970.1| 60S ribosomal protein L3 [Lodderomyces elongisporus NRRL YB-4239]
 gi|146450093|gb|EDK44349.1| 60S ribosomal protein L3 [Lodderomyces elongisporus NRRL YB-4239]
          Length = 389

 Score = 56.3 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 44/145 (30%), Gaps = 35/145 (24%)

Query: 97  VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
             S    F   +++DV  +T G GF G   R     L          R     G    P 
Sbjct: 202 EVSVDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPA 258

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------DDK 185
            V      AG+ G +  T  N +V  V                              +  
Sbjct: 259 NVNWTVARAGQNGYHHRTSINHKVYRVGKGGDESNGATEFDRTKKTINPMGGFVRYGNVN 318

Query: 186 RGLILVKGCVPGAKKNSWILVRDSF 210
              +L+KG +PG KK   + +R S 
Sbjct: 319 NDFVLLKGSIPGVKKR-IVTLRKSL 342


>gi|50311593|ref|XP_455822.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|74660266|sp|Q6CJR7|RL3_KLULA RecName: Full=60S ribosomal protein L3
 gi|49644958|emb|CAG98530.1| KLLA0F16511p [Kluyveromyces lactis]
          Length = 387

 Score = 56.3 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 47/140 (33%), Gaps = 34/140 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GF G   R     L          R     G    P  V  +
Sbjct: 207 SVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPAHVMWS 263

Query: 161 KKMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LIL 190
              AG+ G +  T  N +V  V   DD+                              ++
Sbjct: 264 VARAGQRGYHHRTSINHKVYRVGKGDDEANAATEFDRTKKTITPMGGFVHYGAINNDFVI 323

Query: 191 VKGCVPGAKKNSWILVRDSF 210
           +KG +PG +K   + +R S 
Sbjct: 324 LKGSIPGTRKR-VVTLRKSL 342


>gi|74694166|sp|Q759R7|RL3_ASHGO RecName: Full=60S ribosomal protein L3
          Length = 388

 Score = 56.3 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 43/140 (30%), Gaps = 34/140 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GF G   R     L          R     G    P  V   
Sbjct: 208 SVFEQNEMIDVIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPAHVMWT 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSVD------------------------------DKRGLIL 190
              AG+ G +  T  N +V  +                                    ++
Sbjct: 265 VARAGQNGYHHRTSINHKVYRIGKGGDEGNAATEFDRTKKTITPMGGFVHYGAVNNDFVM 324

Query: 191 VKGCVPGAKKNSWILVRDSF 210
           VKG +PG +K   + +R S 
Sbjct: 325 VKGSIPGTRKR-VVTLRKSL 343


>gi|295674007|ref|XP_002797549.1| 60S ribosomal protein L3 [Paracoccidioides brasiliensis Pb01]
 gi|226280199|gb|EEH35765.1| 60S ribosomal protein L3 [Paracoccidioides brasiliensis Pb01]
 gi|226286840|gb|EEH42353.1| 60S ribosomal protein L3 [Paracoccidioides brasiliensis Pb18]
          Length = 392

 Score = 56.3 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 49/148 (33%), Gaps = 34/148 (22%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GF+G   R     L          R     G    P  V   
Sbjct: 208 SVFEQDEMIDVIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              AG+ G +  T  N ++  +                              + K   ++
Sbjct: 265 VARAGQDGYHHRTSCNHKIYRIGKGSDEGNASTEFDVSKKQITPMGGFVRYGEVKNDYVM 324

Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           +KG VPG KK   + +R +    V+ K 
Sbjct: 325 LKGSVPGVKKR-VLTLRKTLYPQVSRKA 351


>gi|225684621|gb|EEH22905.1| 60S ribosomal protein L3 [Paracoccidioides brasiliensis Pb03]
          Length = 384

 Score = 56.3 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 49/148 (33%), Gaps = 34/148 (22%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GF+G   R     L          R     G    P  V   
Sbjct: 200 SVFEQDEMIDVIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 256

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              AG+ G +  T  N ++  +                              + K   ++
Sbjct: 257 VARAGQDGYHHRTSCNHKIYRIGKGSDEGNASTEFDVSKKQITPMGGFVRYGEVKNDYVM 316

Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           +KG VPG KK   + +R +    V+ K 
Sbjct: 317 LKGSVPGVKKR-VLTLRKTLYPQVSRKA 343


>gi|164659874|ref|XP_001731061.1| hypothetical protein MGL_2060 [Malassezia globosa CBS 7966]
 gi|159104959|gb|EDP43847.1| hypothetical protein MGL_2060 [Malassezia globosa CBS 7966]
          Length = 345

 Score = 56.3 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 47/141 (33%), Gaps = 34/141 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S FT  +LVDV G+T GKG+ G   R     L          R     G       +F  
Sbjct: 162 SLFTQDELVDVIGVTKGKGYEGVTARWGITKLP--RKTHKGLRKVACIGAWHPANVMFT- 218

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              +G+ G +  T  N ++  +                                K   ++
Sbjct: 219 VARSGQDGYHHRTELNKKIYRIGNGADKASGATEFDTTQKSITPMGGFPHYGIVKNDFLM 278

Query: 191 VKGCVPGAKKNSWILVRDSFK 211
           +KG  PG KK   + +R S K
Sbjct: 279 IKGSCPGVKKR-VLTIRKSQK 298


>gi|302307578|ref|NP_984302.2| ADR206Wp [Ashbya gossypii ATCC 10895]
 gi|299789066|gb|AAS52126.2| ADR206Wp [Ashbya gossypii ATCC 10895]
          Length = 387

 Score = 56.3 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 43/140 (30%), Gaps = 34/140 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GF G   R     L          R     G    P  V   
Sbjct: 207 SVFEQNEMIDVIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPAHVMWT 263

Query: 161 KKMAGRMGGNRVTVKNLEVVSVD------------------------------DKRGLIL 190
              AG+ G +  T  N +V  +                                    ++
Sbjct: 264 VARAGQNGYHHRTSINHKVYRIGKGGDEGNAATEFDRTKKTITPMGGFVHYGAVNNDFVM 323

Query: 191 VKGCVPGAKKNSWILVRDSF 210
           VKG +PG +K   + +R S 
Sbjct: 324 VKGSIPGTRKR-VVTLRKSL 342


>gi|126649185|ref|XP_001388265.1| hypothetical protein [Cryptosporidium parvum Iowa II]
 gi|126117187|gb|EAZ51287.1| hypothetical protein cgd5_1580 [Cryptosporidium parvum Iowa II]
 gi|323508581|dbj|BAJ77184.1| cgd5_1580 [Cryptosporidium parvum]
 gi|323509637|dbj|BAJ77711.1| cgd5_1580 [Cryptosporidium parvum]
          Length = 305

 Score = 56.3 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 8/100 (8%)

Query: 83  FRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISH 142
           F V+  +  +PV +      F   +++D+ G++ GKG+ G + R     L          
Sbjct: 110 FCVRCFEQPIPVST-----IFNENEMIDIIGISKGKGYKGVISRWGVTKLP--RKTRRGV 162

Query: 143 RSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           R     G    P RV      AG+ G  + T  N ++  +
Sbjct: 163 RKVSCIGAW-HPARVQFQVPRAGQKGYGQRTETNKKIYRI 201


>gi|330907574|ref|XP_003295853.1| hypothetical protein PTT_03505 [Pyrenophora teres f. teres 0-1]
 gi|311332456|gb|EFQ96051.1| hypothetical protein PTT_03505 [Pyrenophora teres f. teres 0-1]
          Length = 392

 Score = 56.3 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 46/139 (33%), Gaps = 34/139 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G G++G   R     L          R     G    P  V   
Sbjct: 208 SIFEANEMIDVIAVTKGHGYNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPAHVQWT 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              AG+MG +  T  N ++  +                              + K   +L
Sbjct: 265 VARAGQMGYHHRTSVNHKIYRIGKADDEGNASTEFDVSKKRITPMGGFVRYGEVKNDFVL 324

Query: 191 VKGCVPGAKKNSWILVRDS 209
           +KG  PG KK   + +R S
Sbjct: 325 LKGNCPGVKKR-VVTLRKS 342


>gi|255725262|ref|XP_002547560.1| 60S ribosomal protein L3 [Candida tropicalis MYA-3404]
 gi|240135451|gb|EER35005.1| 60S ribosomal protein L3 [Candida tropicalis MYA-3404]
          Length = 389

 Score = 56.3 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 45/145 (31%), Gaps = 35/145 (24%)

Query: 97  VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
             S    F   +++DV  +T G GF G   R     L          R     G    P 
Sbjct: 202 EVSVDSVFEQDEMIDVIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPA 258

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------DDK 185
            V      AG+ G +  T  N +V  V                              + +
Sbjct: 259 NVNWTVARAGQNGYHHRTSINHKVYRVGKGSDEANGATEFDRTKKTINPMGGFVRYGNVQ 318

Query: 186 RGLILVKGCVPGAKKNSWILVRDSF 210
              +L+KG +PG KK   + +R S 
Sbjct: 319 NDFVLLKGSIPGIKKR-VVTLRKSL 342


>gi|67594775|ref|XP_665877.1| hypothetical protein [Cryptosporidium hominis TU502]
 gi|54656728|gb|EAL35641.1| hypothetical protein Chro.50225 [Cryptosporidium hominis]
          Length = 305

 Score = 56.3 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 8/100 (8%)

Query: 83  FRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISH 142
           F V+  +  +PV +      F   +++D+ G++ GKG+ G + R     L          
Sbjct: 110 FCVRCFEQPIPVST-----IFNENEMIDIIGISKGKGYKGVISRWGVTKLP--RKTRRGV 162

Query: 143 RSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           R     G    P RV      AG+ G  + T  N ++  +
Sbjct: 163 RKVSCIGAW-HPARVQFQVPRAGQKGYGQRTETNKKIYRI 201


>gi|146331892|gb|ABQ22452.1| mitochondrial 39S ribosomal protein L3-like protein [Callithrix
           jacchus]
          Length = 76

 Score = 55.9 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
           V  ++ K  +I V G VPG  KN  + VRDS   A  
Sbjct: 1   VWRINTKHNIIYVNGSVPG-HKNCLVKVRDSKLPAYK 36


>gi|320586035|gb|EFW98714.1| 60S ribosomal protein L3 [Grosmannia clavigera kw1407]
          Length = 442

 Score = 55.9 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 44/140 (31%), Gaps = 34/140 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GF G   R     L          R     G    P  V   
Sbjct: 258 SIFEQDEVIDVIAVTKGHGFEGVTARWGTKKLP--RKTHKGLRKVACIGAW-HPAHVQWT 314

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              AG+ G +  T  N ++  +                              +     ++
Sbjct: 315 VARAGQRGYHHRTSVNHKIYRIGKGGSDDNASTDLDVTKKTITPLGGFVRYGEINNDFVM 374

Query: 191 VKGCVPGAKKNSWILVRDSF 210
           VKG +PG KK   + +R S 
Sbjct: 375 VKGSIPGTKKR-VVTLRKSL 393


>gi|170111497|ref|XP_001886952.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164637995|gb|EDR02275.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 388

 Score = 55.9 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 44/139 (31%), Gaps = 34/139 (24%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   + VDV  +T G GF G   R     L          R     G    P +V  + 
Sbjct: 209 VFEQDECVDVIAVTKGHGFEGVTHRWGTKKLP--RKTHKGLRKVACIGAW-HPSKVMFSV 265

Query: 162 KMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLILV 191
             AG+ G +  T  N ++  +                                K   +++
Sbjct: 266 ARAGQNGYHHRTELNKKIYRIGSGTDEANASTESDITNKSITPMGGFPHYGIVKNDFLML 325

Query: 192 KGCVPGAKKNSWILVRDSF 210
           KG +PG KK   I +R S 
Sbjct: 326 KGSIPGTKKR-VITIRKSL 343


>gi|154282025|ref|XP_001541825.1| 60S ribosomal protein L3 [Ajellomyces capsulatus NAm1]
 gi|150412004|gb|EDN07392.1| 60S ribosomal protein L3 [Ajellomyces capsulatus NAm1]
          Length = 346

 Score = 55.9 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 41/129 (31%), Gaps = 33/129 (25%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV  +T G GF+G   R     L          R     G    P  V    
Sbjct: 163 IFEKDEMIDVIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWTV 219

Query: 162 KMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLILV 191
             AG+ G +  T  N ++  +                              + K   +++
Sbjct: 220 ARAGQDGYHHRTSCNHKIYRIGKGSDEGNASTEFDVSKKQITPMGGFVRYGEVKNDYVMI 279

Query: 192 KGCVPGAKK 200
           KG VPG KK
Sbjct: 280 KGSVPGVKK 288


>gi|323510289|dbj|BAJ78038.1| cgd5_1580 [Cryptosporidium parvum]
          Length = 388

 Score = 55.9 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 8/100 (8%)

Query: 83  FRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISH 142
           F V+  +  +PV +      F   +++D+ G++ GKG+ G + R     L          
Sbjct: 193 FCVRCFEQPIPVST-----IFNENEMIDIIGISKGKGYKGVISRWGVTKLP--RKTRRGV 245

Query: 143 RSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           R     G    P RV      AG+ G  + T  N ++  +
Sbjct: 246 RKVSCIGAW-HPARVQFQVPRAGQKGYGQRTETNKKIYRI 284


>gi|240275987|gb|EER39500.1| large subunit ribosomal protein L3 [Ajellomyces capsulatus H143]
 gi|325093348|gb|EGC46658.1| large subunit ribosomal protein L3 [Ajellomyces capsulatus H88]
          Length = 439

 Score = 55.9 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 48/147 (32%), Gaps = 34/147 (23%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV  +T G GF+G   R     L          R     G    P  V    
Sbjct: 256 IFEKDEMIDVIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWTV 312

Query: 162 KMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLILV 191
             AG+ G +  T  N ++  +                              + +   +++
Sbjct: 313 ARAGQDGYHHRTSCNHKIYRIGKGSDEGNASTEFDVSKKQITPMGGFVRYGEVRNDYVMI 372

Query: 192 KGCVPGAKKNSWILVRDSFKSAVNCKG 218
           KG VPG KK   + +R +    V+ + 
Sbjct: 373 KGSVPGVKKR-VLTLRKTLYPQVSRRA 398


>gi|328852642|gb|EGG01786.1| hypothetical protein MELLADRAFT_45021 [Melampsora larici-populina
           98AG31]
          Length = 388

 Score = 55.9 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 44/140 (31%), Gaps = 34/140 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   + +DV  +T GKGF G   R     L          R     G    P +V   
Sbjct: 208 SIFEQDENIDVIAVTKGKGFEGVTHRWGTKKLP--RKTHKGLRKVACIGAW-HPSKVMFT 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSVD------------------------------DKRGLIL 190
              AG+ G +  T  N +V  V                                    ++
Sbjct: 265 VARAGQNGYHHRTELNKKVFRVGKGGDEANATTEFDTTKKAITPMGGFVRYGVVNNDFLM 324

Query: 191 VKGCVPGAKKNSWILVRDSF 210
           +KG VPG KK   I +R S 
Sbjct: 325 LKGSVPGVKKR-VITLRKSL 343


>gi|241952212|ref|XP_002418828.1| ribosomal protein, large subunit, putative [Candida dubliniensis
           CD36]
 gi|223642167|emb|CAX44134.1| ribosomal protein, large subunit, putative [Candida dubliniensis
           CD36]
          Length = 389

 Score = 55.9 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 44/145 (30%), Gaps = 35/145 (24%)

Query: 97  VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
             S    F   +++DV  +T G GF G   R     L          R     G    P 
Sbjct: 202 EVSVDSVFEQDEMIDVIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPA 258

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------DDK 185
            V      AG+ G +  T  N +V  V                              +  
Sbjct: 259 NVNWTVARAGQNGYHHRTSINHKVYRVGKGSDEANGATEFDRTKKTINPMGGFVRYGNVN 318

Query: 186 RGLILVKGCVPGAKKNSWILVRDSF 210
              +L+KG +PG KK   + +R S 
Sbjct: 319 NDFVLLKGSIPGVKKR-VVTLRKSL 342


>gi|68491020|ref|XP_710682.1| likely cytosolic ribosomal protein L3 [Candida albicans SC5314]
 gi|68491039|ref|XP_710673.1| likely cytosolic ribosomal protein L3 [Candida albicans SC5314]
 gi|46431906|gb|EAK91425.1| likely cytosolic ribosomal protein L3 [Candida albicans SC5314]
 gi|46431916|gb|EAK91434.1| likely cytosolic ribosomal protein L3 [Candida albicans SC5314]
 gi|238883805|gb|EEQ47443.1| 60S ribosomal protein L3 [Candida albicans WO-1]
          Length = 389

 Score = 55.9 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 44/145 (30%), Gaps = 35/145 (24%)

Query: 97  VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
             S    F   +++DV  +T G GF G   R     L          R     G    P 
Sbjct: 202 EVSVDSVFEQDEMIDVIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPA 258

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------DDK 185
            V      AG+ G +  T  N +V  V                              +  
Sbjct: 259 NVNWTVARAGQNGYHHRTSINHKVYRVGKGTDEANGATEFDRTKKTINPMGGFVRYGNVN 318

Query: 186 RGLILVKGCVPGAKKNSWILVRDSF 210
              +L+KG +PG KK   + +R S 
Sbjct: 319 NDFVLLKGSIPGVKKR-VVTLRKSL 342


>gi|255946257|ref|XP_002563896.1| Pc20g14180 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588631|emb|CAP86747.1| Pc20g14180 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 392

 Score = 55.9 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 42/130 (32%), Gaps = 33/130 (25%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GFSG   R     L          R     G    P  V   
Sbjct: 208 SIFEKDEMIDVIAVTKGHGFSGVTSRWGTTKLP--RKTHKGLRKVACIGAW-HPNHVQWT 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              AG+ G +  T  N +V  +                              + K   ++
Sbjct: 265 VARAGQDGYHHRTSCNHKVFRIGKGTDEGNASTEFDISKKQITPMGGFVHYGEVKNDFVM 324

Query: 191 VKGCVPGAKK 200
           VKG +PG KK
Sbjct: 325 VKGSIPGVKK 334


>gi|281204054|gb|EFA78250.1| 60S ribosomal protein L3 [Polysphondylium pallidum PN500]
          Length = 399

 Score = 55.5 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 3/87 (3%)

Query: 96  SVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
           +V   S F   +++D+ G+T GKGF+G +KR     L          R     G    P 
Sbjct: 203 TVTVESVFAENEMIDIIGVTKGKGFNGVIKRWGVRKLP--RKTHKGLRKVACIGAW-HPS 259

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           RV      AG++G +     N ++  +
Sbjct: 260 RVSTAVPRAGQLGYHHRVETNKKIYRI 286


>gi|300121321|emb|CBK21701.2| unnamed protein product [Blastocystis hominis]
 gi|300123206|emb|CBK24479.2| unnamed protein product [Blastocystis hominis]
 gi|300176312|emb|CBK23623.2| unnamed protein product [Blastocystis hominis]
 gi|300176758|emb|CBK25327.2| unnamed protein product [Blastocystis hominis]
          Length = 387

 Score = 55.5 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 48/141 (34%), Gaps = 34/141 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F   +++D  G+T GKGF G   R     L          R     G    P RV   
Sbjct: 209 DVFEPSEMIDTIGVTKGKGFEGVTTRWGTTRLP--RKTHRGLRKVACIGAW-HPSRVHFT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSVD--------------DKRGL----------------IL 190
              AG+ G +  T  N ++  +                ++ +                I+
Sbjct: 266 VPRAGQNGYHHRTDVNKKIYRIGAAGDAKSASTEADLTEKSITPMGGFPHYGEVNNDWIM 325

Query: 191 VKGCVPGAKKNSWILVRDSFK 211
           VKG V G+KK   I +R S +
Sbjct: 326 VKGGVMGSKKR-VITLRKSLR 345


>gi|78190647|gb|ABB29645.1| ribosomal protein 3 large subunit [Suberites fuscus]
          Length = 313

 Score = 55.5 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 47/130 (36%), Gaps = 18/130 (13%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F   +++D+ G+T GKGF G   R +   L          R     G    P RV  +
Sbjct: 155 DLFNKDEMIDIIGVTKGKGFKGVTSRWHCKKLP--RKTHKGLRKVACIGAW-HPSRVSFS 211

Query: 161 KKMAGRMGGNRVTVKNLEVVSV-DDKRGL------------ILVKGCVP--GAKKNSWIL 205
              AG+ G +  T  N ++  + D +               I   G  P  G  KN +++
Sbjct: 212 VARAGQKGYHHRTEINKKIYRIGDKEDNANAATEFDPTEKRITPVGGFPHYGTVKNDFVM 271

Query: 206 VRDSFKSAVN 215
           ++ +      
Sbjct: 272 LKGAVVGPKR 281


>gi|146417684|ref|XP_001484810.1| 60S ribosomal protein L3 [Meyerozyma guilliermondii ATCC 6260]
 gi|146390283|gb|EDK38441.1| 60S ribosomal protein L3 [Meyerozyma guilliermondii ATCC 6260]
          Length = 389

 Score = 55.5 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 44/145 (30%), Gaps = 35/145 (24%)

Query: 97  VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
             +    F   +++DV  +T G GF G   R     L          R     G    P 
Sbjct: 202 TVTVDSVFEQNEMIDVIAVTRGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPA 258

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------DDK 185
            V      AG+ G +  T  N +V  V                              +  
Sbjct: 259 NVNWTVARAGQNGYHHRTSINHKVYRVGSGADESNGATEFDRTKKSINPMGGFVRYGNVN 318

Query: 186 RGLILVKGCVPGAKKNSWILVRDSF 210
              ++VKG +PG KK   + +R S 
Sbjct: 319 NDFVMVKGSIPGTKKR-VVTLRKSL 342


>gi|164424622|ref|XP_963317.2| 60S ribosomal protein L3 [Neurospora crassa OR74A]
 gi|30580497|sp|P59671|RL3_NEUCR RecName: Full=60S ribosomal protein L3
 gi|28881190|emb|CAD70371.1| probable 60s ribosomal protein l3 (rpl3) [Neurospora crassa]
 gi|157070591|gb|EAA34081.2| 60S ribosomal protein L3 [Neurospora crassa OR74A]
          Length = 392

 Score = 55.5 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 42/130 (32%), Gaps = 33/130 (25%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GF+G   R     L          R     G    P  V   
Sbjct: 208 SIFEKDEVIDVIAVTKGHGFTGVTARWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSV---DDK---------------------------RGLIL 190
              AG+ G +  T  N ++  +   D +                              ++
Sbjct: 265 VARAGQAGYHHRTSVNHKIYRIGKGDAEDSAATEVDVTKKKITPMGGFVRYGEINNDFVM 324

Query: 191 VKGCVPGAKK 200
           VKG VPG KK
Sbjct: 325 VKGSVPGVKK 334


>gi|126136060|ref|XP_001384554.1| 60S large subunit ribosomal protein L3.e [Scheffersomyces stipitis
           CBS 6054]
 gi|126091752|gb|ABN66525.1| 60S large subunit ribosomal protein L3.e [Scheffersomyces stipitis
           CBS 6054]
          Length = 389

 Score = 55.2 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 44/140 (31%), Gaps = 34/140 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GF G   R     L          R     G    P  V   
Sbjct: 207 SVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPANVNWT 263

Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDK------------------------------RGLIL 190
              AG+ G +  T  N +V  V  +                                 +L
Sbjct: 264 VARAGQNGYHHRTSINHKVYRVGTEGDESSGATEFDRTKKTINPMGGFVRYGNVNNDFVL 323

Query: 191 VKGCVPGAKKNSWILVRDSF 210
           +KG +PG +K   + +R S 
Sbjct: 324 LKGSIPGIRKR-VVTLRKSL 342


>gi|145340549|ref|XP_001415385.1| Ribosomal protein L3, component of cytosolic 80S ribosome and 60S
           large subunit [Ostreococcus lucimarinus CCE9901]
 gi|144575608|gb|ABO93677.1| Ribosomal protein L3, component of cytosolic 80S ribosome and 60S
           large subunit [Ostreococcus lucimarinus CCE9901]
          Length = 386

 Score = 55.2 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 47/140 (33%), Gaps = 35/140 (25%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++D+ G+T GKG+ G + R     L          R  G  G    P RV    
Sbjct: 207 VFQQDEMIDLIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVGCIGAW-HPSRVSYTV 263

Query: 162 KMAGRMGGNRVTVKNLEVVSV-------------------------------DDKRGLIL 190
             AG+ G +  T  N +V  +                                 K   ++
Sbjct: 264 ARAGQHGYHHRTEINKKVYKIGKAGQDSFGASTFHDPTEKEITPMGGFAHYGIVKHDYVM 323

Query: 191 VKGCVPGAKKNSWILVRDSF 210
           +KG V G +K   I +R S 
Sbjct: 324 IKGGVVGPRKR-LITMRQSL 342


>gi|119190755|ref|XP_001245984.1| hypothetical protein CIMG_05425 [Coccidioides immitis RS]
 gi|303315241|ref|XP_003067628.1| 60S ribosomal protein L3, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240107298|gb|EER25483.1| 60S ribosomal protein L3, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|320035569|gb|EFW17510.1| 60S ribosomal protein L3 [Coccidioides posadasii str. Silveira]
          Length = 392

 Score = 55.2 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 47/148 (31%), Gaps = 34/148 (22%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GF G   R     L          R     G    P  V   
Sbjct: 208 SVFEQDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              AG+ G +  T  N ++  +                              + K   I+
Sbjct: 265 VARAGQDGYHHRTSVNHKIYRIGKGSDEGNASTDFDVSKKQITPMGGFVRYGEVKNDFII 324

Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNCKG 218
           +KG  PG KK   + +R +    V+ K 
Sbjct: 325 LKGSCPGVKKR-VLTLRKTLFPQVSRKA 351


>gi|125535904|gb|EAY82392.1| hypothetical protein OsI_37606 [Oryza sativa Indica Group]
          Length = 733

 Score = 55.2 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 4/87 (4%)

Query: 97  VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
                  F   +++D+ G+T GKG+ G + R     L          R     G    P 
Sbjct: 549 EIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPA 605

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           RV      AG+ G +  T  N +V  +
Sbjct: 606 RVSYTVARAGQNGYHHRTEMNKKVYKI 632


>gi|326509435|dbj|BAJ91634.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 388

 Score = 54.8 bits (131), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 45/135 (33%), Gaps = 33/135 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   Q++DV G+T G G  G   R     L          R     G    P  V  +
Sbjct: 208 SIFEQNQVIDVIGVTSGHGTEGVTHRWGVTRLP--RKTHRGLRKVACIGAW-HPSNVMYS 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSV----DDKRG--------------------------LIL 190
              AG+ G +  T KN ++  +    D K G                           ++
Sbjct: 265 VPRAGQNGYHHRTEKNKKIYRIGTGSDVKSGSTEYDISDKTITPMGGFPHYGIVNEDFVM 324

Query: 191 VKGCVPGAKKNSWIL 205
           VKG VPG  K   +L
Sbjct: 325 VKGGVPGTLKRPLVL 339


>gi|189204215|ref|XP_001938443.1| 60S ribosomal protein L3 [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187985542|gb|EDU51030.1| 60S ribosomal protein L3 [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 392

 Score = 54.8 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 42/130 (32%), Gaps = 33/130 (25%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G G++G   R     L          R     G    P  V   
Sbjct: 208 SIFEANEMIDVIAVTKGHGYNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPAHVQWT 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              AG+MG +  T  N ++  +                              + K   +L
Sbjct: 265 VARAGQMGYHHRTSVNHKIYRIGKADDEGNASTEFDVSKKRITPMGGFVRYGEVKNDFVL 324

Query: 191 VKGCVPGAKK 200
           +KG  PG KK
Sbjct: 325 LKGNCPGVKK 334


>gi|15220533|ref|NP_176352.1| RPL3B (R-PROTEIN L3 B); structural constituent of ribosome
           [Arabidopsis thaliana]
 gi|21542436|sp|P22738|RL32_ARATH RecName: Full=60S ribosomal protein L3-2
 gi|4585874|gb|AAD25547.1|AC005850_4 60s ribosomal protein L3 [Arabidopsis thaliana]
 gi|28392966|gb|AAO41918.1| putative ribosomal protein [Arabidopsis thaliana]
 gi|28973595|gb|AAO64122.1| putative ribosomal protein [Arabidopsis thaliana]
 gi|332195738|gb|AEE33859.1| 60S ribosomal protein L3-2 [Arabidopsis thaliana]
          Length = 390

 Score = 54.8 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 44/132 (33%), Gaps = 6/132 (4%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + +     K  +   + + ++      +  V     L           F   +++D
Sbjct: 163 LAHTQIRKMKGLKQKKAHLNEIQINGGDIAKK--VDYACSLFEKQVPVDA-IFQKDEMID 219

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           + G+T GKG+ G + R     L          R     G    P RV      AG+ G +
Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYTVARAGQNGYH 276

Query: 171 RVTVKNLEVVSV 182
             T  N +V  V
Sbjct: 277 HRTEMNKKVYRV 288


>gi|7417236|gb|AAF62506.1| ribosomal protein L3 [Trypanoplasma borreli]
          Length = 416

 Score = 54.8 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 50/301 (16%), Positives = 81/301 (26%), Gaps = 106/301 (35%)

Query: 9   KLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------------- 38
           K GMT +    +  G ++       PVT+L      +V                      
Sbjct: 50  KAGMTHIVRDLDRPGSKMNKKEVVEPVTILEAPPMAIVGVTGYRETAVGYKCIGTVWAHH 109

Query: 39  ------RTLDKNGYMAVQVGA-----------GEAKVKNVSKPMRGFFSSVNVSPKKKLF 81
                 R   KN   + Q+             G+   + V K ++   + + V    +L 
Sbjct: 110 VSQEFRRRYYKNWKQSAQLAFTKRKSFIRSKNGKVAEQRVLKALKDKATVIRVIAHTQLR 169

Query: 82  EFRVQKDDDLLPVGSVFSP-----------------------SYFTVGQLVDVTGMTIGK 118
           + R  +  +                                 S F   +  DV  +T G 
Sbjct: 170 KLRNHRVGNKKAHIQEIQVNGGTIEAKLKMAKDLLEKEVRIDSIFQQSETCDVCAVTKGH 229

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           GF G + R     L          R     G    P RV      AG+ G +  T  N +
Sbjct: 230 GFEGVVHRWGVACLP--RKSHRGLRKVACIGAWH-PARVMYTVARAGQNGYHHRTHLNKK 286

Query: 179 VVS------VDDK--------------------------RGLILVKGCVPGAKKNSWILV 206
           +        VD K                             I++KG V G ++   + +
Sbjct: 287 IYRIGRSSSVDPKQATTTYDLTEKVITPMGGFVGYGTVRNDFIMLKGSVAGPRRR-VVTL 345

Query: 207 R 207
           R
Sbjct: 346 R 346


>gi|71984544|ref|NP_001021255.1| Ribosomal Protein, Large subunit family member (rpl-3)
           [Caenorhabditis elegans]
 gi|50507483|emb|CAH04729.1| C. elegans protein F13B10.2c, confirmed by transcript evidence
           [Caenorhabditis elegans]
 gi|51011806|emb|CAH10799.1| C. elegans protein F13B10.2c, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 353

 Score = 54.8 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 63/199 (31%), Gaps = 22/199 (11%)

Query: 3   SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQ---VVVHRTLDKNGYMAV 49
           +  +  K GMT +    +  G ++        VT++         V  +    +      
Sbjct: 44  TAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALT 103

Query: 50  QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVF------SPSYF 103
            + A     +   +    +  S   +  K   +++ +    L+            S    
Sbjct: 104 TIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVI 163

Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
              Q++D  G+T G GF G   R +   L          R     G    P RV      
Sbjct: 164 AHTQMIDTIGVTRGHGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVAFTVAR 220

Query: 164 AGRMGGNRVTVKNLEVVSV 182
           AG+ G +  T+ N ++  +
Sbjct: 221 AGQKGFHHRTIINNKIYRI 239


>gi|61654614|gb|AAX48833.1| L3 [Suberites domuncula]
          Length = 399

 Score = 54.8 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 47/130 (36%), Gaps = 18/130 (13%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F   +++DV G+T GKGF G   R +   L          R     G    P RV  +
Sbjct: 210 DIFNKDEMIDVIGVTKGKGFKGVTSRWHCKKLP--RKTHKGLRKVACIGAW-HPSRVSFS 266

Query: 161 KKMAGRMGGNRVTVKNLEVVSV-DDKRGL------------ILVKGCVP--GAKKNSWIL 205
              AG+ G +  T  N ++  + D +               I   G  P  G  KN +++
Sbjct: 267 VARAGQKGYHHRTEINKKIYRIGDKEDNANAATEFDPTEKRITPVGGFPHYGTVKNDFLM 326

Query: 206 VRDSFKSAVN 215
           ++ +      
Sbjct: 327 LKGAVVGPKR 336


>gi|73973632|ref|XP_868298.1| PREDICTED: similar to 60S ribosomal protein L3 (L4) isoform 6
           [Canis familiaris]
          Length = 358

 Score = 54.4 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 69/207 (33%), Gaps = 35/207 (16%)

Query: 3   SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
           +  +  K GMT +    +  G ++        VT++      VV        GY+    G
Sbjct: 44  TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIV-----GYVETPRG 98

Query: 53  --------AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP---------VG 95
                   A     +   +  + +  S   +  K   +++       L            
Sbjct: 99  LRTFKTIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQ 158

Query: 96  SVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
            +   ++  + +++DV G+T GKG+ G   R +   L          R     G    P 
Sbjct: 159 VIRVIAHTQMHEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPA 215

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           RV  +   AG+ G +  T  N ++  +
Sbjct: 216 RVAFSMARAGQKGYHHRTEINKKIYKI 242


>gi|806279|gb|AAA66161.1| ribosomal protein [Arabidopsis thaliana]
          Length = 390

 Score = 54.4 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 44/132 (33%), Gaps = 6/132 (4%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + +     K  +   + + ++      +  V     L           F   +++D
Sbjct: 163 LAHTQIRKMKGVKQKKAHLNEIQINGGDIAKK--VDYACSLFEKQVPVDA-IFQKDEMID 219

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           + G+T GKG+ G + R     L          R     G    P RV      AG+ G +
Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYTVARAGQNGYH 276

Query: 171 RVTVKNLEVVSV 182
             T  N +V  V
Sbjct: 277 HRTEMNKKVYRV 288


>gi|157874311|ref|XP_001685639.1| ribosomal protein l3 [Leishmania major strain Friedlin]
 gi|157876054|ref|XP_001686391.1| ribosomal protein l3 [Leishmania major strain Friedlin]
 gi|157876056|ref|XP_001686392.1| ribosomal protein l3 [Leishmania major strain Friedlin]
 gi|157876058|ref|XP_001686393.1| ribosomal protein l3 [Leishmania major strain Friedlin]
 gi|157876060|ref|XP_001686394.1| ribosomal protein l3 [Leishmania major strain Friedlin]
 gi|66476128|gb|AAY51372.1| ribosomal protein L3 [Leishmania major]
 gi|68128711|emb|CAJ08844.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
 gi|68129465|emb|CAJ08008.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
 gi|68129466|emb|CAJ08009.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
 gi|68129467|emb|CAJ08010.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
 gi|68129468|emb|CAJ08011.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
          Length = 419

 Score = 54.4 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 63/244 (25%), Gaps = 73/244 (29%)

Query: 9   KLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------------- 38
           K GMT +    +  G ++       PVT+L      +V                      
Sbjct: 50  KAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVWAHH 109

Query: 39  ------RTLDKNGYMAVQVGAGEAKVKNVSKP--------MRGFFSSVNV---------- 74
                 R   KN   + Q+     K    +K         +  F    +V          
Sbjct: 110 TSVEFRRRYYKNWKQSAQLAFSRQKQFANTKEGKVAEARTLNAFAKKASVIRVIAHTQLR 169

Query: 75  --------SPKKKLFEFRVQKDDDLLPVG-------SVFSPS-YFTVGQLVDVTGMTIGK 118
                     K  + E +V        +                F   +  DV  +T G 
Sbjct: 170 KLRNHRVGVKKAHVQEIQVNGGSVAAKIALAKSLLEKEVRVDSVFQQSEACDVCSVTKGH 229

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           G  G +KR     L          R     G    P RV      AG+ G +  T  N +
Sbjct: 230 GTEGVVKRWGVACLP--RKTHRGLRKVACIGAW-HPARVMYTVARAGQHGYHHRTQLNKK 286

Query: 179 VVSV 182
           +  +
Sbjct: 287 IYQI 290


>gi|224004980|ref|XP_002296141.1| RL3, ribosomal protein 3, 60S large ribosomal subunit
           [Thalassiosira pseudonana CCMP1335]
 gi|209586173|gb|ACI64858.1| RL3, ribosomal protein 3, 60S large ribosomal subunit
           [Thalassiosira pseudonana CCMP1335]
          Length = 395

 Score = 54.4 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 4/87 (4%)

Query: 97  VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
             +    F   +L+DV G+T G G+ G   R     L          R     G    P 
Sbjct: 205 EVTVDSVFAKDELIDVLGVTKGHGYEGVTTRWGVSRLP--RKTHRGLRKVACIGSW-HPA 261

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           RV      AG+ G +  T  N ++  +
Sbjct: 262 RVSDTVPRAGQNGYHHRTEMNKKIYRI 288


>gi|297837293|ref|XP_002886528.1| ARP2/RPL3B [Arabidopsis lyrata subsp. lyrata]
 gi|297332369|gb|EFH62787.1| ARP2/RPL3B [Arabidopsis lyrata subsp. lyrata]
          Length = 390

 Score = 54.0 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 44/132 (33%), Gaps = 6/132 (4%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + +     K  +   + + ++      +  V     L           F   +++D
Sbjct: 163 LAHTQIRKMKGLKQKKAHLNEIQINGGDIAKK--VDYACSLFEKQVPVDA-IFQKDEMID 219

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           + G+T GKG+ G + R     L          R     G    P RV      AG+ G +
Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYTVARAGQNGYH 276

Query: 171 RVTVKNLEVVSV 182
             T  N +V  V
Sbjct: 277 HRTEMNKKVYRV 288


>gi|296237105|ref|XP_002763612.1| PREDICTED: 60S ribosomal protein L3-like isoform 2 [Callithrix
           jacchus]
          Length = 354

 Score = 54.0 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 66/203 (32%), Gaps = 31/203 (15%)

Query: 3   SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
           +  +  K GMT +    +  G ++        VT++      VV        GY+    G
Sbjct: 44  TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIV-----GYVETPRG 98

Query: 53  ---AGEAKVKNVSKPMRGFFSS--VNVSPKKKLFEFRVQKDDDLLPV--------GSVFS 99
                    +++S   +  F         K  L E +V        +          V  
Sbjct: 99  LRTFKTVFAEHISDECKRRFYKNWHKSKKKAHLMEIQVNGGTVSEKLDWARKRLEQQVPV 158

Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
              F   +++DV G++  KG+ G   R +   L          R     G    P RV  
Sbjct: 159 NQVFGQDEMIDVIGVSKRKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAF 215

Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182
           +   AG+ G +  T  N ++  +
Sbjct: 216 SVARAGQKGYHHRTEINKKIYKI 238


>gi|72387812|ref|XP_844330.1| ribosomal protein L3, mitochondrial [Trypanosoma brucei TREU927]
 gi|62359481|gb|AAX79918.1| ribosomal protein L3, mitochondrial, putative [Trypanosoma brucei]
 gi|70800863|gb|AAZ10771.1| ribosomal protein L3, mitochondrial, putative [Trypanosoma brucei
           brucei strain 927/4 GUTat10.1]
 gi|261327491|emb|CBH10466.1| ribosomal protein L3, mitochondrial, putative [Trypanosoma brucei
           gambiense DAL972]
          Length = 429

 Score = 54.0 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 61/246 (24%), Gaps = 73/246 (29%)

Query: 6   VARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH----------------- 38
           +  K GMT +    +  G ++       PVT+L      VV                   
Sbjct: 47  MVYKAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVW 106

Query: 39  ---------RTLDKNGYMAVQVGAGEAK-----------VKNVSKPMRG----------- 67
                    R   KN   + Q+   + K                K               
Sbjct: 107 AHHTSVEFRRRFYKNWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFEKKADIIRVVAHT 166

Query: 68  FFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP------------SYFTVGQLVDVTGMT 115
               +  +          +   +   +                  S F   +  DV  +T
Sbjct: 167 QLRKLRNNRVGVKKAHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAVT 226

Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
            G GF+G +KR     L          R     G    P RV      AG+ G +  T  
Sbjct: 227 KGHGFTGVVKRWGVACLP--RKTHRGLRKVACIGAW-HPSRVMYTVARAGQHGYHHRTHL 283

Query: 176 NLEVVS 181
           N ++  
Sbjct: 284 NKKIYQ 289


>gi|297739519|emb|CBI29701.3| unnamed protein product [Vitis vinifera]
          Length = 389

 Score = 54.0 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 42/132 (31%), Gaps = 6/132 (4%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + +     K  +     + V+      +  V                 F   +++D
Sbjct: 163 LAHTQIRKMKGLKQKKAHLMEIQVNGGDVAKK--VDYAYGFFEKQIPIDA-IFQKDEMID 219

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           + G+T GKG+ G + R     L          R     G    P RV      AG+ G +
Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYH 276

Query: 171 RVTVKNLEVVSV 182
             T  N ++  V
Sbjct: 277 HRTEMNKKIYKV 288


>gi|146097010|ref|XP_001468006.1| ribosomal protein l3 [Leishmania infantum JPCM5]
 gi|134072372|emb|CAM71080.1| putative ribosomal protein L3 [Leishmania infantum JPCM5]
          Length = 419

 Score = 54.0 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 63/244 (25%), Gaps = 73/244 (29%)

Query: 9   KLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------------- 38
           K GMT +    +  G ++       PVT+L      +V                      
Sbjct: 50  KAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVWAHH 109

Query: 39  ------RTLDKNGYMAVQVGAGEAKVKNVSKP--------MRGFFSSVNV---------- 74
                 R   KN   + Q+     K    +K         +  F    +V          
Sbjct: 110 TSVEFRRRYYKNWKQSAQLAFSRQKQFANTKEGKVAEARTLNAFAKKASVIRVIAHTQLR 169

Query: 75  --------SPKKKLFEFRVQKDDDLLPVG-------SVFSPS-YFTVGQLVDVTGMTIGK 118
                     K  + E +V        +                F   +  DV  +T G 
Sbjct: 170 KLRNHRVGVKKAHVQEIQVNGGSVAAKIALAKSLLEKEVRVDSVFQQSEACDVCSVTKGH 229

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           G  G +KR     L          R     G    P RV      AG+ G +  T  N +
Sbjct: 230 GTEGVVKRWGVACLP--RKTHRGLRKVACIGAW-HPARVMYTVARAGQHGYHHRTQLNKK 286

Query: 179 VVSV 182
           +  +
Sbjct: 287 IYQI 290


>gi|322495094|emb|CBZ30398.1| putative ribosomal protein L3 [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322495095|emb|CBZ30399.1| putative ribosomal protein L3 [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 419

 Score = 54.0 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 64/244 (26%), Gaps = 73/244 (29%)

Query: 9   KLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------------- 38
           K GMT +    +  G ++       PVT+L      +V                      
Sbjct: 50  KAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVWAHH 109

Query: 39  ------RTLDKNGYMAVQVGAGEAKVKNVSKPMR--------GFFSSVNV---------- 74
                 R   KN   + Q+     K    +K  R         F    +V          
Sbjct: 110 TSVEFRRRYYKNWKQSAQLAFSRQKQFANTKEGRIAEARTLNAFAKKASVIRVIAHTQLR 169

Query: 75  --------SPKKKLFEFRVQKDDDLLPVG-------SVFSPS-YFTVGQLVDVTGMTIGK 118
                     K  + E ++   +    +                F   +  DV  +T G 
Sbjct: 170 KLRNHRVGVKKAHVQEIQINGGNVAAKIALAKSLLEKEVRVDSVFQQSEACDVCSVTKGH 229

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           G  G +KR     L          R     G    P RV      AG+ G +  T  N +
Sbjct: 230 GTEGVVKRWGVACLP--RKTHRGLRKVACIGAW-HPARVMYTVARAGQHGYHHRTQLNKK 286

Query: 179 VVSV 182
           +  +
Sbjct: 287 IYQI 290


>gi|219121047|ref|XP_002185755.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209582604|gb|ACI65225.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 389

 Score = 54.0 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 44/146 (30%), Gaps = 34/146 (23%)

Query: 97  VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
             +    F   + +DV G+T G G+ G   R     L          R     G    P 
Sbjct: 202 EVTVDSIFAKDEQIDVLGVTRGHGYEGVTTRWGVSRLP--RKTHRGLRKVACIGSW-HPA 258

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------DDK 185
           RV      AG+ G    T  N +V  V                              + K
Sbjct: 259 RVSTTVPRAGQNGYFHRTEMNKKVYRVGKKGDEASCQTDADLTKKSITPMGGFVHYGEVK 318

Query: 186 RGLILVKGCVPGAKKNSWILVRDSFK 211
              +++KG + G KK   IL +   K
Sbjct: 319 EDWLMLKGAIVGVKKRPLILRKSLMK 344


>gi|147865994|emb|CAN83050.1| hypothetical protein VITISV_042376 [Vitis vinifera]
          Length = 389

 Score = 54.0 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 42/132 (31%), Gaps = 6/132 (4%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + +     K  +     + V+      +  V                 F   +++D
Sbjct: 163 LAHTQIRKMKGLKQKKAHLMEIQVNGGDVAKK--VDYAYGFFEKQIPIDA-IFQKDEMID 219

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           + G+T GKG+ G + R     L          R     G    P RV      AG+ G +
Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYH 276

Query: 171 RVTVKNLEVVSV 182
             T  N ++  V
Sbjct: 277 HRTEMNKKIYKV 288


>gi|116783991|gb|ABK23172.1| unknown [Picea sitchensis]
          Length = 389

 Score = 53.6 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 43/132 (32%), Gaps = 6/132 (4%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + K     K  +     + V+      +  V    +            F   +++D
Sbjct: 163 LAHTQIKKMKGLKQNKAHLMEIQVNGGTVPQK--VDYAYNFFEKQVPIDA-LFQKDEMID 219

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           V G+T GKG+ G + R     L          R     G    P RV      AG+ G +
Sbjct: 220 VIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYH 276

Query: 171 RVTVKNLEVVSV 182
             T  N ++  +
Sbjct: 277 HRTEMNKKIYKI 288


>gi|322494411|emb|CBZ29713.1| putative ribosomal protein L3 [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 419

 Score = 53.6 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 64/244 (26%), Gaps = 73/244 (29%)

Query: 9   KLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------------- 38
           K GMT +    +  G ++       PVT+L      +V                      
Sbjct: 50  KAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVWAHH 109

Query: 39  ------RTLDKNGYMAVQVGAGEAKVKNVSKPMR--------GFFSSVNV---------- 74
                 R   KN   + Q+     K    +K  R         F    +V          
Sbjct: 110 TSVEFRRRYYKNWKQSAQLAFSRQKQFANTKEGRVVEARTLNAFAKKASVIRVIAHTQLR 169

Query: 75  --------SPKKKLFEFRVQKDDDLLPVG-------SVFSPS-YFTVGQLVDVTGMTIGK 118
                     K  + E ++   +    +                F   +  DV  +T G 
Sbjct: 170 KLRNHRVGVKKAHVQEIQINGGNVAAKIALAKSLLEKEVRVDSVFQQSEACDVCSVTKGH 229

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           G  G +KR     L          R     G    P RV      AG+ G +  T  N +
Sbjct: 230 GTEGVVKRWGVACLP--RKTHRGLRKVACIGAW-HPARVMYTVARAGQHGYHHRTQLNKK 286

Query: 179 VVSV 182
           +  +
Sbjct: 287 IYQI 290


>gi|225466938|ref|XP_002262711.1| PREDICTED: hypothetical protein, partial [Vitis vinifera]
          Length = 299

 Score = 53.6 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 42/132 (31%), Gaps = 6/132 (4%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + +     K  +     + V+      +  V                 F   +++D
Sbjct: 163 LAHTQIRKMKGLKQKKAHLMEIQVNGGDVAKK--VDYAYGFFEKQIPIDA-IFQKDEMID 219

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           + G+T GKG+ G + R     L          R     G    P RV      AG+ G +
Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYH 276

Query: 171 RVTVKNLEVVSV 182
             T  N ++  V
Sbjct: 277 HRTEMNKKIYKV 288


>gi|222424540|dbj|BAH20225.1| AT1G61580 [Arabidopsis thaliana]
          Length = 257

 Score = 53.6 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 44/132 (33%), Gaps = 6/132 (4%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + +     K  +   + + ++      +  V     L           F   +++D
Sbjct: 30  LAHTQIRKMKGLKQKKAHLNEIQINGGDIAKK--VDYACSLFEKQVPVDA-IFQKDEMID 86

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           + G+T GKG+ G + R     L          R     G    P RV      AG+ G +
Sbjct: 87  IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYTVARAGQNGYH 143

Query: 171 RVTVKNLEVVSV 182
             T  N +V  V
Sbjct: 144 HRTEMNKKVYRV 155


>gi|116791630|gb|ABK26048.1| unknown [Picea sitchensis]
 gi|224285374|gb|ACN40410.1| unknown [Picea sitchensis]
          Length = 389

 Score = 53.6 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 34/98 (34%), Gaps = 4/98 (4%)

Query: 85  VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRS 144
           V    +            F   ++VD+ G+T GKG+ G + R     L          R 
Sbjct: 195 VDYAYNFFEKQVPIDA-LFQKDEMVDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRK 251

Query: 145 HGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
               G    P RV      AG+ G +  T  N ++  +
Sbjct: 252 VACIGAW-HPARVSFTVARAGQNGYHHRTEMNKKIYKI 288


>gi|224082478|ref|XP_002306708.1| predicted protein [Populus trichocarpa]
 gi|118481111|gb|ABK92509.1| unknown [Populus trichocarpa]
 gi|222856157|gb|EEE93704.1| predicted protein [Populus trichocarpa]
          Length = 389

 Score = 53.6 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 42/132 (31%), Gaps = 6/132 (4%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + +     K  +     + V+      +  V                 F   +++D
Sbjct: 163 LAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQK--VDFAYGFFEKQVPIDA-VFQKDEMID 219

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           V G+T GKG+ G + R     L          R     G    P RV      AG+ G +
Sbjct: 220 VIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYH 276

Query: 171 RVTVKNLEVVSV 182
             T  N ++  V
Sbjct: 277 HRTELNKKIYKV 288


>gi|320166087|gb|EFW42986.1| ribosomal protein L3 isoform b [Capsaspora owczarzaki ATCC 30864]
          Length = 416

 Score = 53.2 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 11/102 (10%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F+  ++VDV G+T GKGF+G   R     L          R     G    P  V ++
Sbjct: 229 DVFSENEMVDVIGVTRGKGFTGVTYRFGTRRLP--RKSHKGLRKVACIGAW-HPANVNRS 285

Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNS 202
              AG+ G +  T  N ++  V          G   GAK N+
Sbjct: 286 VARAGQKGYHHRTELNKKIYRVGA--------GASSGAKNNA 319


>gi|289616290|emb|CBI57086.1| unnamed protein product [Sordaria macrospora]
          Length = 392

 Score = 53.2 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 41/130 (31%), Gaps = 33/130 (25%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GF+G   R     L          R     G    P  V   
Sbjct: 208 SIFEKDEVIDVIAVTKGHGFTGVTARWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              AG+ G +  T  N ++  +                              +     ++
Sbjct: 265 VARAGQAGYHHRTSVNHKIYRIGKAGAEDSAATEVDVTKKKITPMGGFVRYGEINNDFVM 324

Query: 191 VKGCVPGAKK 200
           VKG VPG KK
Sbjct: 325 VKGSVPGVKK 334


>gi|301093682|ref|XP_002997686.1| 60S ribosomal protein L3 [Phytophthora infestans T30-4]
 gi|262109935|gb|EEY67987.1| 60S ribosomal protein L3 [Phytophthora infestans T30-4]
          Length = 389

 Score = 53.2 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 46/149 (30%), Gaps = 34/149 (22%)

Query: 85  VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRS 144
           V     L       +   F   +++DV G+T G G  G + R     L          R 
Sbjct: 192 VDFAKSLFEKQVPVTA-VFAKDEMIDVIGVTKGHGVEGVITRWGVTRLP--RKTHRGLRK 248

Query: 145 HGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------DDKRGL------- 188
               G    P RV      AG+ G +  T  N ++  V           ++ L       
Sbjct: 249 VACIGAW-HPSRVRFTVPRAGQHGYHHRTEINKKIYRVGAAGDKKSCMTEQDLTEKDITP 307

Query: 189 --------------ILVKGCVPGAKKNSW 203
                         +++KG + G KK + 
Sbjct: 308 LGGFPHYGVINEDWLMIKGAIVGTKKRAL 336


>gi|146097013|ref|XP_001468007.1| ribosomal protein l3 [Leishmania infantum JPCM5]
 gi|146099403|ref|XP_001468635.1| ribosomal protein l3 [Leishmania infantum]
 gi|134072373|emb|CAM71081.1| putative ribosomal protein L3 [Leishmania infantum JPCM5]
 gi|134073003|emb|CAM71722.1| putative ribosomal protein L3 [Leishmania infantum JPCM5]
          Length = 419

 Score = 53.2 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 64/244 (26%), Gaps = 73/244 (29%)

Query: 9   KLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------------- 38
           K GMT +    +  G ++       PVT+L      +V                      
Sbjct: 50  KAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVWAHH 109

Query: 39  ------RTLDKNGYMAVQVGAGEAKVKNVSKP--------MRGFFSSVNV---------- 74
                 R   KN   + Q+     K    +K         +  F    +V          
Sbjct: 110 TSVEFRRRYYKNWKQSAQLAFSRQKQFANTKEGKVAEARTLNAFAKKASVIRVIAHTQLR 169

Query: 75  --------SPKKKLFEFRVQKDDDLLPVG-------SVFSPS-YFTVGQLVDVTGMTIGK 118
                     K  + E ++   +    +                F   +  DV  +T G 
Sbjct: 170 KLRNHRVGVKKAHVQEIQINGGNVAAKIALAKSLLEKEVRVDSVFQQSEACDVCSVTKGH 229

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           G  G +KR     L          R     G    P RV      AG+ G +  T  N +
Sbjct: 230 GTEGVVKRWGVACLP--RKTHRGLRKVACIGAW-HPARVMYTVARAGQHGYHHRTQLNKK 286

Query: 179 VVSV 182
           +  +
Sbjct: 287 IYQI 290


>gi|316971123|gb|EFV54952.1| 60S ribosomal protein L3 [Trichinella spiralis]
          Length = 405

 Score = 53.2 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 67/247 (27%), Gaps = 73/247 (29%)

Query: 3   SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGY------ 46
           +  +  K GMT +    +  G +I        VTVL      +V    +   GY      
Sbjct: 60  TAFIGYKAGMTHIVREVDKPGSKINKKDVVEAVTVLETPPMVIVGKCVV---GYIETPQG 116

Query: 47  -------MAVQVGAGEAKVKN-----VSKPMRGFFSSVNV-------------------- 74
                   A  +     +         +K  + +     V                    
Sbjct: 117 LRAFKTIWAEHLSDDCKRRYKCERKAFTKASKKWQDEAGVKEIQTDFARMIKYCKVIRVI 176

Query: 75  -----------SPKKKLFEFRVQKDDDLLPV--------GSVFSPSYFTVGQLVDVTGMT 115
                        K  + E ++        V          V   S F   +++D  G+T
Sbjct: 177 AHTQMKLLHHGQKKAHIMEIQLNGGTIEEKVNWAREHLEKQVPVDSVFARDEMIDCIGVT 236

Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
            GKGF G   R +   L          R     G    P RV      AG+ G +  T  
Sbjct: 237 KGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVRYTVARAGQKGYHHRTEI 293

Query: 176 NLEVVSV 182
           N ++  +
Sbjct: 294 NKKIYRI 300


>gi|115487526|ref|NP_001066250.1| Os12g0167900 [Oryza sativa Japonica Group]
 gi|548770|sp|P35684|RL3_ORYSJ RecName: Full=60S ribosomal protein L3
 gi|303853|dbj|BAA02155.1| ribosomal protein L3 [Oryza sativa Japonica Group]
 gi|77553113|gb|ABA95909.1| 60S ribosomal protein L3, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113648757|dbj|BAF29269.1| Os12g0167900 [Oryza sativa Japonica Group]
 gi|125578626|gb|EAZ19772.1| hypothetical protein OsJ_35352 [Oryza sativa Japonica Group]
 gi|146141390|tpg|DAA01059.1| TPA_inf: ribosomal protein L3A [Oryza sativa (japonica
           cultivar-group)]
 gi|146141404|tpg|DAA01151.1| TPA_inf: ribosomal protein L3A [Oryza sativa (japonica
           cultivar-group)]
 gi|215686363|dbj|BAG87624.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 389

 Score = 53.2 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 4/87 (4%)

Query: 97  VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
                  F   +++D+ G+T GKG+ G + R     L          R     G    P 
Sbjct: 205 EIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPA 261

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           RV      AG+ G +  T  N +V  +
Sbjct: 262 RVSYTVARAGQNGYHHRTEMNKKVYKI 288


>gi|94468802|gb|ABF18250.1| ribosomal protein L3 [Aedes aegypti]
          Length = 415

 Score = 53.2 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 3/83 (3%)

Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
              F   +++D   +T GKGF G   R +   L          R     G    P RV  
Sbjct: 208 ADVFRQDEMIDCVAVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVAF 264

Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182
               AG+ G +  T  N ++  +
Sbjct: 265 TVARAGQKGYHHRTEINKKIYRI 287


>gi|6688812|emb|CAB65281.1| L3 Ribosomal protein [Medicago sativa subsp. x varia]
          Length = 388

 Score = 52.9 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 42/131 (32%), Gaps = 6/131 (4%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + +     K  +     + V+      +  V    +            F   +++D
Sbjct: 163 LAHTQIRKMKGLKQKKAHIMEIQVNGGTIAQK--VDFAYNFFEKQVPIDA-VFQKDEMID 219

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           + G+T GKG+ G + R     L          R     G    P RV      AG+ G +
Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYH 276

Query: 171 RVTVKNLEVVS 181
             T  N ++  
Sbjct: 277 HRTELNKKIYK 287


>gi|78190797|gb|ABB29720.1| ribosomal protein 3 large subunit [Monosiga brevicollis]
          Length = 332

 Score = 52.9 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F+  + +D+ G+T G GF G   R     L          R     G        +  
Sbjct: 160 DVFSQNEHIDIIGVTKGHGFEGVTHRWGTKKLP--RKTHKGLRKVACIGAWHPANVTYA- 216

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 217 VPRAGQRGYHHRTEMNKKIYRI 238


>gi|323455903|gb|EGB11771.1| hypothetical protein AURANDRAFT_36266 [Aureococcus anophagefferens]
          Length = 393

 Score = 52.9 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 59/300 (19%), Positives = 87/300 (29%), Gaps = 102/300 (34%)

Query: 3   SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVV---------------- 36
           +  +A K GMT V    +  G ++        VTVL      VV                
Sbjct: 44  TAFMAYKAGMTHVVRDVDRPGSKVHKKEIVEAVTVLEAPPMVVVGLVGYVETPRGLRSLA 103

Query: 37  ----------VHRTLDKNGYM---------AVQVGA---GEAKVKNVSKPMRGFFSSVNV 74
                     V R   KN Y          A +  A   GE  V    + ++ + S V V
Sbjct: 104 TVWAAFLSEEVKRRFYKNWYKSKRKAMTKYAAKYSASDGGEKDVDRELERIKKYCSVVRV 163

Query: 75  SP------------KKKLFEFRVQKDDDL-----LPVG---SVFSPS-YFTVGQLVDVTG 113
                         K  + E +V    D+        G           F   +++DV G
Sbjct: 164 IAHTQVKKLKLRQKKAHVMEIQVNGGADVAAKVDYAKGLFEQEVPVDTVFNANEMIDVLG 223

Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
            T G G  G + R     L          R     G    P RV      +G+ G +  T
Sbjct: 224 ATRGHGTEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPSRVSFTVARSGQNGYHHRT 280

Query: 174 VKNLEVVSVD--------------DKRGL----------------ILVKGCVPGAKKNSW 203
             N ++  +                ++ +                I+VKGCV G+KK   
Sbjct: 281 EMNKKIYRIGKSGDAKSASTEADLTEKSITPMGGFPHYGEVNEDWIMVKGCVVGSKKRCL 340


>gi|110740330|dbj|BAF02060.1| hypothetical protein [Arabidopsis thaliana]
          Length = 555

 Score = 52.9 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 56/191 (29%), Gaps = 38/191 (19%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + +     K  +     + ++      +  V                 F   +++D
Sbjct: 329 LAHTQIRKMKGLKQKKAHMMEIQINGGTIAQK--VDFAYSFFEKQIPIEA-VFQKDEMID 385

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           + G+T GKG+ G + R     L          R     G    P RV      AG+ G +
Sbjct: 386 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYTVARAGQNGYH 442

Query: 171 RVTVKNLEVVSV-------------------------------DDKRGLILVKGCVPGAK 199
             T  N ++  +                                 K   +++KGC  G K
Sbjct: 443 HRTELNKKIYRLGKVGTEAHTAMTEYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPK 502

Query: 200 KNSWILVRDSF 210
           K   + +R S 
Sbjct: 503 KR-VVTLRQSL 512


>gi|167535326|ref|XP_001749337.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772203|gb|EDQ85858.1| predicted protein [Monosiga brevicollis MX1]
          Length = 419

 Score = 52.9 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F+  + +D+ G+T G GF G   R     L          R     G        +  
Sbjct: 228 DVFSQNEHIDIIGVTKGHGFEGVTHRWGTKKLP--RKTHKGLRKVACIGAWHPANVTYA- 284

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 285 VPRAGQRGYHHRTEMNKKIYRI 306


>gi|170041842|ref|XP_001848658.1| 60S ribosomal protein L3 [Culex quinquefasciatus]
 gi|167865417|gb|EDS28800.1| 60S ribosomal protein L3 [Culex quinquefasciatus]
          Length = 452

 Score = 52.9 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 30/83 (36%), Gaps = 3/83 (3%)

Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
              F   ++VD   +T GKGF G   R +   L          R     G    P RV  
Sbjct: 245 ADVFGQDEMVDCVAVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVAF 301

Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182
               AG+ G +  T  N ++  +
Sbjct: 302 TVARAGQKGYHHRTEINKKIYRI 324


>gi|115484365|ref|NP_001065844.1| Os11g0168200 [Oryza sativa Japonica Group]
 gi|62701923|gb|AAX92996.1| ribosomal protein L3, putative [Oryza sativa Japonica Group]
 gi|62734368|gb|AAX96477.1| ribosomal protein L3, putative [Oryza sativa Japonica Group]
 gi|77548788|gb|ABA91585.1| 60S ribosomal protein L3, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113644548|dbj|BAF27689.1| Os11g0168200 [Oryza sativa Japonica Group]
 gi|125533541|gb|EAY80089.1| hypothetical protein OsI_35258 [Oryza sativa Indica Group]
 gi|125576343|gb|EAZ17565.1| hypothetical protein OsJ_33102 [Oryza sativa Japonica Group]
 gi|146141406|tpg|DAA01152.1| TPA_inf: ribosomal protein L3B [Oryza sativa (japonica
           cultivar-group)]
 gi|146141408|tpg|DAA01150.1| TPA_inf: ribosomal protein L3B [Oryza sativa]
 gi|215706975|dbj|BAG93435.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215715327|dbj|BAG95078.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 389

 Score = 52.9 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 4/87 (4%)

Query: 97  VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
                  F   +++D+ G+T GKG+ G + R     L          R     G    P 
Sbjct: 205 EIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPA 261

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           RV      AG+ G +  T  N +V  +
Sbjct: 262 RVSYTVARAGQNGYHHRTEMNKKVYKI 288


>gi|145497857|ref|XP_001434917.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124402045|emb|CAK67520.1| unnamed protein product [Paramecium tetraurelia]
          Length = 341

 Score = 52.9 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 49/153 (32%), Gaps = 35/153 (22%)

Query: 97  VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
                  F   + +DV G+T GKG +G +KR                R  G  G    P 
Sbjct: 149 EVKVDQVFKQNEQIDVLGVTKGKGVAGVIKRFGVK--HLQKKTHRGWRRVGCIGGW-HPA 205

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSVDD------------------------------K 185
            V  +    G++G +  T  N ++  +                                +
Sbjct: 206 NVRYSVARTGQLGYHHRTEMNKKIYRIGAAGDKNTASTEADLTSKAITPLGGFPHYGEIR 265

Query: 186 RGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
              +++KG + G KK   +L+R S     + K 
Sbjct: 266 NDFLMLKGGIVGPKKR-VVLLRKSLVPQTSRKA 297


>gi|145475213|ref|XP_001423629.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|145532966|ref|XP_001452233.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124390690|emb|CAK56231.1| unnamed protein product [Paramecium tetraurelia]
 gi|124419921|emb|CAK84836.1| unnamed protein product [Paramecium tetraurelia]
          Length = 393

 Score = 52.9 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 49/153 (32%), Gaps = 35/153 (22%)

Query: 97  VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
                  F   + +DV G+T GKG +G +KR                R  G  G    P 
Sbjct: 201 EVKVDQVFKQNEQIDVLGVTKGKGVAGVIKRFGVK--HLQKKTHRGWRRVGCIGGW-HPA 257

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSVDD------------------------------K 185
            V  +    G++G +  T  N ++  +                                +
Sbjct: 258 NVRYSVARTGQLGYHHRTEMNKKIYRIGAAGDKNTASTEADLTSKAITPLGGFPHYGEIR 317

Query: 186 RGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
              +++KG + G KK   +L+R S     + K 
Sbjct: 318 NDFLMLKGGIVGPKKR-VVLLRKSLVPQTSRKA 349


>gi|145527660|ref|XP_001449630.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417218|emb|CAK82233.1| unnamed protein product [Paramecium tetraurelia]
          Length = 393

 Score = 52.5 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 49/153 (32%), Gaps = 35/153 (22%)

Query: 97  VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
                  F   + +DV G+T GKG +G +KR                R  G  G    P 
Sbjct: 201 EVKVDQVFNQNEQIDVLGVTKGKGVAGVIKRFGVK--HLQKKTHRGWRRVGCIGGW-HPA 257

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSVDD------------------------------K 185
            V  +    G++G +  T  N ++  +                                +
Sbjct: 258 NVRYSVARTGQLGYHHRTEMNKKIYRIGAAGDKNTASTEADLTSKAITPLGGFPHYGEIR 317

Query: 186 RGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
              +++KG + G KK   +L+R S     + K 
Sbjct: 318 NDFLMLKGGIVGPKKR-VVLLRKSLVPQTSRKA 349


>gi|255570998|ref|XP_002526450.1| 60S ribosomal protein L3, putative [Ricinus communis]
 gi|223534230|gb|EEF35945.1| 60S ribosomal protein L3, putative [Ricinus communis]
          Length = 389

 Score = 52.5 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 41/131 (31%), Gaps = 6/131 (4%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + +     K  +     + V+      +  V                 F   +++D
Sbjct: 163 LAHTQIRKMKGLKQKKAHLMEIQVNGGDVAQK--VDFAYSFFEKQVPIDA-VFQKDEMID 219

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           + G+T GKG+ G + R     L          R     G    P RV      AG+ G +
Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYH 276

Query: 171 RVTVKNLEVVS 181
             T  N ++  
Sbjct: 277 HRTEMNKKIYK 287


>gi|241859209|ref|XP_002416193.1| ribosomal protein L3, putative [Ixodes scapularis]
 gi|215510407|gb|EEC19860.1| ribosomal protein L3, putative [Ixodes scapularis]
          Length = 390

 Score = 52.5 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 76/247 (30%), Gaps = 70/247 (28%)

Query: 3   SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVV--------------- 37
           +  +  K GMT +    +  G ++       PVT+L +    +V                
Sbjct: 31  TAFLGFKAGMTHIVREVDKPGSKVNKKEVVEPVTILEVPPMMIVGLVGYIETPKGLRAFK 90

Query: 38  -----------HRTLDKNGYMAVQVGA-----------GEAKVKNVSKPMRGFFSSVNVS 75
                       R   KN Y + +              G+ +++   K M+ +   + V 
Sbjct: 91  TVWAEHLSEECRRRFYKNWYKSKKKAFTKSSKKWQEDLGKQEIERDLKKMKKYCKVIRVL 150

Query: 76  PKKKLF--------EFRVQKDDDLLPVGSVFS------------PSYFTVGQLVDVTGMT 115
              ++            ++   +   VG+                  F   +++DV G+T
Sbjct: 151 AHTQMKLMRRRQKKAHIMEIQVNGGSVGAKIKWAREHLEKPVTVSQVFAQDEMIDVIGVT 210

Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
            GKGF G   R +   L          R     G    P RV      AG+ G +  T  
Sbjct: 211 KGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFTVARAGQKGYHHRTEI 267

Query: 176 NLEVVSV 182
           N ++  +
Sbjct: 268 NKKIYRI 274


>gi|242077200|ref|XP_002448536.1| hypothetical protein SORBIDRAFT_06g028650 [Sorghum bicolor]
 gi|241939719|gb|EES12864.1| hypothetical protein SORBIDRAFT_06g028650 [Sorghum bicolor]
          Length = 389

 Score = 52.5 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++D+ G+T GKG+ G + R     L          R     G    P RV   
Sbjct: 210 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYT 266

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N +V  +
Sbjct: 267 VARAGQNGYHHRTEMNKKVYKI 288


>gi|242017396|ref|XP_002429175.1| 60S ribosomal protein L3, putative [Pediculus humanus corporis]
 gi|212514053|gb|EEB16437.1| 60S ribosomal protein L3, putative [Pediculus humanus corporis]
          Length = 407

 Score = 52.5 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++D  G+T GKG+ G   R +   L          R     G    P RV    
Sbjct: 210 VFAPDEMIDCIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFTV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEMNKKIYRI 287


>gi|37909690|gb|AAP23996.1| ribosomal protein L3B [Oryza sativa Indica Group]
          Length = 345

 Score = 52.5 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 4/87 (4%)

Query: 97  VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
                  F   +++D+ G+T GKG+ G + R     L          R     G    P 
Sbjct: 194 EIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPA 250

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           RV      AG+ G +  T  N +V  +
Sbjct: 251 RVSYTVARAGQNGYHHRTEMNKKVYKI 277


>gi|255642195|gb|ACU21362.1| unknown [Glycine max]
          Length = 389

 Score = 52.5 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 42/131 (32%), Gaps = 6/131 (4%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + +     K  +     + V+      +  V      L          F   +++D
Sbjct: 163 LAHTQIRKMKGLKQKKAHIMEIQVNGGTIAQK--VDFAYSFLEKQVPIDA-VFQKDEMID 219

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           + G+T GKG+ G + R     L          R     G    P RV      AG+ G +
Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYH 276

Query: 171 RVTVKNLEVVS 181
             T  N +V  
Sbjct: 277 HRTELNKKVYK 287


>gi|312088746|ref|XP_003145979.1| 60S ribosomal protein L3 [Loa loa]
 gi|307758859|gb|EFO18093.1| 60S ribosomal protein L3 [Loa loa]
          Length = 386

 Score = 52.5 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 67/237 (28%), Gaps = 60/237 (25%)

Query: 3   SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVV-------------VHR 39
           +  +  K GMT +    +  G ++        VTVL      +V               +
Sbjct: 44  TAFMGFKAGMTHIVREVDKPGSKVNKKEVVEAVTVLETPPMIIVGVVGYIDTPRGPRQFK 103

Query: 40  TL---------------------------------DKNGYMAVQVGAGEAKVKNVSKPMR 66
           T+                                 D++G  ++Q    + K       + 
Sbjct: 104 TVWAEHLSEDCRRRFYKNWNSSKKKAFQKHAKKWQDEDGMKSIQADLAKMKKYCSIIRVI 163

Query: 67  GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMK 125
               +  +  +        + D               F   +++DV G+T GKGF G   
Sbjct: 164 AHTQAHIMEIQVNGGTIPEKVDWAYEHFEKQVPVDSIFAQDEMIDVIGVTKGKGFKGVTS 223

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           R +   L          R     G    P RV      AG+ G +  T  N ++  +
Sbjct: 224 RWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFTVARAGQKGYHHRTEVNKKIYRI 277


>gi|167377647|ref|XP_001734483.1| 60S ribosomal protein L3 [Entamoeba dispar SAW760]
 gi|165904006|gb|EDR29379.1| 60S ribosomal protein L3, putative [Entamoeba dispar SAW760]
          Length = 381

 Score = 52.5 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 48/125 (38%), Gaps = 19/125 (15%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   + +DV  +T G G++G +KR     L          R     G    P RV   
Sbjct: 188 SVFGTDECIDVCSVTKGHGYNGVIKRFGVRHLP--RKTHRGLRKVACVGAW-HPARVSWT 244

Query: 161 KKMAGRMGGNRVTVKNLEVVSV-------------DDKRGLILVKGCVP--GAKKNSWIL 205
              AG+MG  + T  N ++  +               ++G I   G  P  G  KN +++
Sbjct: 245 VARAGQMGFFKRTEVNKKIYRLGCGDLKNAKTEFDITEKG-ITPMGGFPHYGVVKNDFLM 303

Query: 206 VRDSF 210
           ++ + 
Sbjct: 304 IKGTV 308


>gi|67472477|ref|XP_652042.1| 60S ribosomal protein L3 [Entamoeba histolytica HM-1:IMSS]
 gi|67473369|ref|XP_652451.1| 60S ribosomal protein L3 [Entamoeba histolytica HM-1:IMSS]
 gi|67475438|ref|XP_653413.1| 60S ribosomal protein L3 [Entamoeba histolytica HM-1:IMSS]
 gi|167386238|ref|XP_001737679.1| 60S ribosomal protein L3 [Entamoeba dispar SAW760]
 gi|167388407|ref|XP_001738553.1| 60S ribosomal protein L3 [Entamoeba dispar SAW760]
 gi|56468865|gb|EAL46673.1| 60S ribosomal protein L3, putative [Entamoeba histolytica
           HM-1:IMSS]
 gi|56469305|gb|EAL47065.1| 60S ribosomal protein L3, putative [Entamoeba histolytica
           HM-1:IMSS]
 gi|56470361|gb|EAL48027.1| 60S ribosomal protein L3, putative [Entamoeba histolytica
           HM-1:IMSS]
 gi|165898153|gb|EDR25097.1| 60S ribosomal protein L3, putative [Entamoeba dispar SAW760]
 gi|165899449|gb|EDR26038.1| 60S ribosomal protein L3, putative [Entamoeba dispar SAW760]
          Length = 402

 Score = 52.5 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 48/125 (38%), Gaps = 19/125 (15%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   + +DV  +T G G++G +KR     L          R     G    P RV   
Sbjct: 209 SVFGTDECIDVCSVTKGHGYNGVIKRFGVRHLP--RKTHRGLRKVACVGAW-HPARVSWT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV-------------DDKRGLILVKGCVP--GAKKNSWIL 205
              AG+MG  + T  N ++  +               ++G I   G  P  G  KN +++
Sbjct: 266 VARAGQMGFFKRTEVNKKIYRLGCGDLKNAKTEFDITEKG-ITPMGGFPHYGVVKNDFLM 324

Query: 206 VRDSF 210
           ++ + 
Sbjct: 325 IKGTV 329


>gi|296081197|emb|CBI18223.3| unnamed protein product [Vitis vinifera]
          Length = 449

 Score = 52.5 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 56/180 (31%), Gaps = 24/180 (13%)

Query: 46  YMAVQ--VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
           Y +V   +   + +     K  +     + V+      +  V                 F
Sbjct: 216 YASVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQK--VDYAYGFFEKQVPVDA-IF 272

Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
              +++D+ G+T GKG+ G + R     L          R     G    P RV      
Sbjct: 273 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVAR 329

Query: 164 AGRMGGNRVTVKNLEVVS--------------VDDKRGLILVKGCVP--GAKKNSWILVR 207
           AG+ G +  T  N ++                 D     I   G  P  G  K+ +++++
Sbjct: 330 AGQNGYHHRTEMNKKIYKLGKIEQESHTALTEFDRTEKDITPMGGFPHYGVVKDDYVMIK 389


>gi|34105772|gb|AAQ62077.1| ribosomal protein L3 [Triticum aestivum]
          Length = 384

 Score = 52.5 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 34/98 (34%), Gaps = 4/98 (4%)

Query: 85  VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRS 144
           V    +            F   +++D+ G+T GKG+ G + R     L          R 
Sbjct: 190 VDYGYNFFEKEVPIDA-VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRK 246

Query: 145 HGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
               G    P RV      AG+ G +  T  N +V  +
Sbjct: 247 VACIGAW-HPARVSYTVARAGQNGYHHRTEMNKKVYKI 283


>gi|325184995|emb|CCA19486.1| 60S ribosomal protein L3 putative [Albugo laibachii Nc14]
          Length = 388

 Score = 52.5 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 45/146 (30%), Gaps = 34/146 (23%)

Query: 85  VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRS 144
           V     L       S   FT  +L+D+ G T G G  G + R     L          R 
Sbjct: 191 VDFAKSLFEKQVPVSA-VFTQDELIDICGATKGHGIEGVVTRWGVTRLP--RKTHRGLRK 247

Query: 145 HGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD---------DKRGL------- 188
               G    P RV      AG+ G +  T  N ++  +           ++ L       
Sbjct: 248 VACIGAW-HPSRVSYTVPRAGQHGYHHRTEINKKIYRIGAAGDAKSCQTEQDLTEKSITP 306

Query: 189 --------------ILVKGCVPGAKK 200
                         +++KG V G KK
Sbjct: 307 MGGFPHYGIINEDWLMIKGAVVGVKK 332


>gi|312283375|dbj|BAJ34553.1| unnamed protein product [Thellungiella halophila]
          Length = 389

 Score = 52.5 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 6/145 (4%)

Query: 37  VHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGS 96
               + K G +   +   + +     K  +     + ++      +  V           
Sbjct: 149 QLEKMKKYGTVIRVLAHTQIRKMKGLKQKKAHMMEIQINGGTIAQK--VDFAYSFFEKQI 206

Query: 97  VFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGR 156
               S F   +++DV G+T GKG+ G + R     L          R     G    P R
Sbjct: 207 PID-SVFQKDEMIDVIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPAR 262

Query: 157 VFKNKKMAGRMGGNRVTVKNLEVVS 181
           V      AG+ G +  T  N ++  
Sbjct: 263 VSYTVARAGQNGYHHRTELNKKIYR 287


>gi|224120106|ref|XP_002331138.1| predicted protein [Populus trichocarpa]
 gi|222872866|gb|EEF09997.1| predicted protein [Populus trichocarpa]
          Length = 389

 Score = 52.5 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 40/127 (31%), Gaps = 6/127 (4%)

Query: 55  EAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGM 114
           + +     K  +     + V+      +  V                 F   +++D+ G+
Sbjct: 167 QIRKMKGLKQKKAHLMEIQVNGGDVAKK--VDFAYSFFEKQIPIDA-IFQKDEMIDIIGV 223

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           T GKG+ G + R     L          R     G    P RV      AG+ G +  T 
Sbjct: 224 TKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYHHRTE 280

Query: 175 KNLEVVS 181
            N ++  
Sbjct: 281 LNKKIYK 287


>gi|260946767|ref|XP_002617681.1| 60S ribosomal protein L3 [Clavispora lusitaniae ATCC 42720]
 gi|238849535|gb|EEQ38999.1| 60S ribosomal protein L3 [Clavispora lusitaniae ATCC 42720]
          Length = 388

 Score = 52.5 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 43/140 (30%), Gaps = 34/140 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G GF G   R     L          R     G    P  V   
Sbjct: 207 SVFEKDEMIDVVAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPANVNWT 263

Query: 161 KKMAGRMGGNRVTVKNLEVVSVD------------------------------DKRGLIL 190
              AG+ G +  T  N +V  V                                    +L
Sbjct: 264 VARAGQNGYHHRTSINHKVYRVGSGADEANGATEFDRTKKTINPLGGFVRYGLVNNDFVL 323

Query: 191 VKGCVPGAKKNSWILVRDSF 210
           +KG +PG KK   + +R S 
Sbjct: 324 LKGSIPGIKKR-VVTLRKSL 342


>gi|326497903|dbj|BAJ94814.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 389

 Score = 52.5 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++D+ G+T GKG+ G + R     L          R     G    P RV   
Sbjct: 210 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYT 266

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N +V  +
Sbjct: 267 VARAGQNGYHHRTEMNKKVYKI 288


>gi|293335791|ref|NP_001168481.1| hypothetical protein LOC100382258 [Zea mays]
 gi|223948579|gb|ACN28373.1| unknown [Zea mays]
          Length = 253

 Score = 52.5 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 4/88 (4%)

Query: 96  SVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP 154
                   F   +++D+ G+T GKG+ G + R     L          R     G    P
Sbjct: 68  EEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HP 124

Query: 155 GRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            RV      AG+ G +  T  N +V  +
Sbjct: 125 ARVSYTVARAGQNGYHHRTEMNKKVYKI 152


>gi|118152402|gb|ABK63945.1| ribosomal protein L3-B2 [Triticum aestivum]
 gi|118152404|gb|ABK63946.1| ribosomal protein L3-B2 [Triticum aestivum]
 gi|146141394|tpg|DAA01145.1| TPA_inf: ribosomal protein L3B-2 [Triticum aestivum]
          Length = 389

 Score = 52.5 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 33/98 (33%), Gaps = 4/98 (4%)

Query: 85  VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRS 144
           V                 F   +++D+ G+T GKG+ G + R     L          R 
Sbjct: 195 VDYGYSFFEKEVPIDA-VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRK 251

Query: 145 HGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
               G    P RV      AG+ G +  T  N +V  +
Sbjct: 252 VACIGAW-HPARVSYTVARAGQNGYHHRTEMNKKVYKI 288


>gi|183235559|ref|XP_001914254.1| 60S ribosomal protein L3 [Entamoeba histolytica HM-1:IMSS]
 gi|169800490|gb|EDS88972.1| 60S ribosomal protein L3, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 350

 Score = 52.5 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 48/125 (38%), Gaps = 19/125 (15%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   + +DV  +T G G++G +KR     L          R     G    P RV   
Sbjct: 157 SVFGTDECIDVCSVTKGHGYNGVIKRFGVRHLP--RKTHRGLRKVACVGAW-HPARVSWT 213

Query: 161 KKMAGRMGGNRVTVKNLEVVSV-------------DDKRGLILVKGCVP--GAKKNSWIL 205
              AG+MG  + T  N ++  +               ++G I   G  P  G  KN +++
Sbjct: 214 VARAGQMGFFKRTEVNKKIYRLGCGDLKNAKTEFDITEKG-ITPMGGFPHYGVVKNDFLM 272

Query: 206 VRDSF 210
           ++ + 
Sbjct: 273 IKGTV 277


>gi|34105768|gb|AAQ62075.1| ribosomal protein L3 [Triticum aestivum]
 gi|34105770|gb|AAQ62076.1| ribosomal protein L3 [Triticum aestivum]
 gi|34105774|gb|AAQ62078.1| ribosomal protein L3 [Triticum aestivum]
 gi|118152389|gb|ABK63938.1| ribosomal protein L3-B3 [Triticum aestivum]
 gi|118152400|gb|ABK63944.1| ribosomal protein L3-B1 [Triticum aestivum]
 gi|146141392|tpg|DAA01144.1| TPA_inf: ribosomal protein L3B-3 [Triticum aestivum]
 gi|146141396|tpg|DAA01146.1| TPA_inf: ribosomal protein L3B-1 [Triticum aestivum]
          Length = 389

 Score = 52.5 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 34/98 (34%), Gaps = 4/98 (4%)

Query: 85  VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRS 144
           V    +            F   +++D+ G+T GKG+ G + R     L          R 
Sbjct: 195 VDYGYNFFEKEVPIDA-VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRK 251

Query: 145 HGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
               G    P RV      AG+ G +  T  N +V  +
Sbjct: 252 VACIGAW-HPARVSYTVARAGQNGYHHRTEMNKKVYKI 288


>gi|307107912|gb|EFN56153.1| hypothetical protein CHLNCDRAFT_35097 [Chlorella variabilis]
          Length = 386

 Score = 52.5 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 41/124 (33%), Gaps = 19/124 (15%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   ++VD   +T G G  G + R     L          R     G    P RV    
Sbjct: 208 VFNQSEMVDAIAITKGHGTEGVVTRWGVSRLP--RKTHRGLRKVACIGAW-HPARVGWTV 264

Query: 162 KMAGRMGGNRVTVKNLEVVSVD----------DKRGL----ILVKGCVP--GAKKNSWIL 205
             +G MG N  T  N +V  +            +  +    I   G  P  G  K  +++
Sbjct: 265 ARSGAMGFNHRTEMNKKVYRIGVKGEESHAATTEHDVTVKDITPMGGFPHYGVVKEDYVM 324

Query: 206 VRDS 209
           ++ +
Sbjct: 325 IKGA 328


>gi|194693910|gb|ACF81039.1| unknown [Zea mays]
 gi|194702010|gb|ACF85089.1| unknown [Zea mays]
 gi|195606812|gb|ACG25236.1| 60S ribosomal protein L3 [Zea mays]
 gi|195619674|gb|ACG31667.1| 60S ribosomal protein L3 [Zea mays]
 gi|195626206|gb|ACG34933.1| 60S ribosomal protein L3 [Zea mays]
 gi|195641988|gb|ACG40462.1| 60S ribosomal protein L3 [Zea mays]
          Length = 389

 Score = 52.5 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++D+ G+T GKG+ G + R     L          R     G    P RV   
Sbjct: 210 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYT 266

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N +V  +
Sbjct: 267 VARAGQNGYHHRTEMNKKVYKI 288


>gi|212721340|ref|NP_001131208.1| hypothetical protein LOC100192516 [Zea mays]
 gi|194690876|gb|ACF79522.1| unknown [Zea mays]
          Length = 389

 Score = 52.1 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++D+ G+T GKG+ G + R     L          R     G    P RV   
Sbjct: 210 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYT 266

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N +V  +
Sbjct: 267 VARAGQNGYHHRTEMNKKVYKI 288


>gi|225465175|ref|XP_002263053.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 219

 Score = 52.1 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 39/120 (32%), Gaps = 6/120 (5%)

Query: 63  KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
           K  +     + V+      +  V                 F   +++D+ G+T GKG+ G
Sbjct: 5   KQKKAHLMEIQVNGGDVAKK--VDYAYGFFEKQIPIDA-IFQKDEMIDIIGVTKGKGYEG 61

Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            + R     L          R     G    P RV      AG+ G +  T  N ++  V
Sbjct: 62  VVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYHHRTEMNKKIYKV 118


>gi|255566636|ref|XP_002524302.1| 60S ribosomal protein L3, putative [Ricinus communis]
 gi|223536393|gb|EEF38042.1| 60S ribosomal protein L3, putative [Ricinus communis]
          Length = 389

 Score = 52.1 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 41/131 (31%), Gaps = 6/131 (4%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + +     K  +     + V+      +  V                 F   +++D
Sbjct: 163 LAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQK--VDFAYGFFEKQVPIDA-VFQKDEMID 219

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           + G+T GKG+ G + R     L          R     G    P RV      AG+ G +
Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYH 276

Query: 171 RVTVKNLEVVS 181
             T  N ++  
Sbjct: 277 HRTEMNKKIYK 287


>gi|326495464|dbj|BAJ85828.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 213

 Score = 52.1 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 34/98 (34%), Gaps = 4/98 (4%)

Query: 85  VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRS 144
           V    +            F   +++D+ G+T GKG+ G + R     L          R 
Sbjct: 19  VDYGYNFFEKEVPIDA-VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRK 75

Query: 145 HGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
               G    P RV      AG+ G +  T  N +V  +
Sbjct: 76  VACIGAW-HPARVSYTVARAGQNGYHHRTEMNKKVYKI 112


>gi|224066623|ref|XP_002302168.1| predicted protein [Populus trichocarpa]
 gi|118483469|gb|ABK93633.1| unknown [Populus trichocarpa]
 gi|222843894|gb|EEE81441.1| predicted protein [Populus trichocarpa]
          Length = 389

 Score = 52.1 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 41/131 (31%), Gaps = 6/131 (4%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + +     K  +     + V+      +  V                 F   +++D
Sbjct: 163 LAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQK--VDFAYGFFEKQVPIDA-VFQKDEMID 219

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           + G+T GKG+ G + R     L          R     G    P RV      AG+ G +
Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYH 276

Query: 171 RVTVKNLEVVS 181
             T  N ++  
Sbjct: 277 HRTELNKKIYK 287


>gi|71019525|ref|XP_759993.1| hypothetical protein UM03846.1 [Ustilago maydis 521]
 gi|46099519|gb|EAK84752.1| hypothetical protein UM03846.1 [Ustilago maydis 521]
          Length = 474

 Score = 52.1 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 41/124 (33%), Gaps = 18/124 (14%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV  +T G G+ G   R     L          R     G       +F  
Sbjct: 291 SVFEQNEIIDVIAVTKGHGYEGVTARWGTKKLP--RKTHRGLRKIACIGAWHPANVMFT- 347

Query: 161 KKMAGRMGGNRVTVKNLEVVSV-------------DDKRGLILVKGCVP--GAKKNSWIL 205
              +G+ G +  T    ++  +             D     I   G  P  G  KN +++
Sbjct: 348 VARSGQDGYHHRTEIGKKIYRISNGEDKTSGSTDFDTTEKAITPLGGFPHYGLVKNDFVM 407

Query: 206 VRDS 209
           ++ S
Sbjct: 408 IKGS 411


>gi|37625025|gb|AAQ96336.1| ribosomal protein L3B [Nicotiana tabacum]
          Length = 409

 Score = 51.7 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 41/131 (31%), Gaps = 6/131 (4%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + +     K  +     + V+      +  V                 F   +++D
Sbjct: 183 LAHTQIRKMKGLKQKKAHLMEIQVNGGDVSQK--VDYAYGFFEKQIPVDA-IFQKDEMID 239

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           + G+T GKG+ G + R     L          R     G    P RV      AG+ G +
Sbjct: 240 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYTVARAGQNGYH 296

Query: 171 RVTVKNLEVVS 181
             T  N +V  
Sbjct: 297 HRTELNKKVYR 307


>gi|37625023|gb|AAQ96335.1| ribosomal protein L3A [Nicotiana tabacum]
          Length = 389

 Score = 51.7 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 41/131 (31%), Gaps = 6/131 (4%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + +     K  +     + V+      +  V                 F   +++D
Sbjct: 163 LAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQK--VDFAYGFFEKQVPVDA-VFQKDEMID 219

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           + G+T GKG+ G + R     L          R     G    P RV      AG+ G +
Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYTVARAGQNGYH 276

Query: 171 RVTVKNLEVVS 181
             T  N +V  
Sbjct: 277 HRTEMNKKVYK 287


>gi|225460636|ref|XP_002265125.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 397

 Score = 51.7 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 44/138 (31%), Gaps = 8/138 (5%)

Query: 46  YMAVQ--VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
           Y +V   +   + +     K  +     + V+      +  V                 F
Sbjct: 164 YASVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQK--VDYAYGFFEKQVPVDA-IF 220

Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
              +++D+ G+T GKG+ G + R     L          R     G    P RV      
Sbjct: 221 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVAR 277

Query: 164 AGRMGGNRVTVKNLEVVS 181
           AG+ G +  T  N ++  
Sbjct: 278 AGQNGYHHRTEMNKKIYK 295


>gi|260790238|ref|XP_002590150.1| hypothetical protein BRAFLDRAFT_126055 [Branchiostoma floridae]
 gi|229275339|gb|EEN46161.1| hypothetical protein BRAFLDRAFT_126055 [Branchiostoma floridae]
          Length = 404

 Score = 51.7 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++D+ G+T GKGF G   R     L          R     G    P RV    
Sbjct: 210 VFGQDEMIDIIGITKGKGFKGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPARVGYGV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G N  T  N +V  V
Sbjct: 267 ARAGQKGYNHRTEINKKVYRV 287


>gi|268564071|ref|XP_002647082.1| C. briggsae CBR-RPL-3 protein [Caenorhabditis briggsae]
 gi|60393717|sp|Q9NBK4|RL3_CAEBR RecName: Full=60S ribosomal protein L3
 gi|187036492|emb|CAP24473.1| CBR-RPL-3 protein [Caenorhabditis briggsae AF16]
          Length = 401

 Score = 51.7 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 4/87 (4%)

Query: 97  VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
                  F+  +++D  G+T G GF G   R +   L          R     G    P 
Sbjct: 204 QIQVDTVFSQDEMIDTIGVTKGHGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPS 260

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           RV      AG+ G +  T+ N ++  +
Sbjct: 261 RVAFTVARAGQKGFHHRTIINNKIYRI 287


>gi|42565416|gb|AAS20981.1| ribosomal protein L3 [Hyacinthus orientalis]
          Length = 263

 Score = 51.7 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 46/156 (29%), Gaps = 15/156 (9%)

Query: 38  HRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFS----SVNVSPKKKLFEFRVQKDDDLLP 93
           ++    +G   +Q    + K       +               K  L E +V        
Sbjct: 10  NKYESDDGKKEIQTQLDKMKKYATVIRVLAHTQLRKMKGLKQKKAHLMEIQVNGGTIAEK 69

Query: 94  V-------GSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145
           V                F   +++D+ G+T GKG+ G + R     L          R  
Sbjct: 70  VDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKV 127

Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
              G    P RV      AG+ G +  T  N ++  
Sbjct: 128 ACIGAW-HPARVSYTVARAGQNGYHHRTEMNKKIYR 162


>gi|147833564|emb|CAN63848.1| hypothetical protein VITISV_039858 [Vitis vinifera]
          Length = 389

 Score = 51.7 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 44/138 (31%), Gaps = 8/138 (5%)

Query: 46  YMAVQ--VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
           Y +V   +   + +     K  +     + V+      +  V                 F
Sbjct: 156 YASVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQK--VDYAYGFFEKQVPVDA-IF 212

Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
              +++D+ G+T GKG+ G + R     L          R     G    P RV      
Sbjct: 213 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVAR 269

Query: 164 AGRMGGNRVTVKNLEVVS 181
           AG+ G +  T  N ++  
Sbjct: 270 AGQNGYHHRTEMNKKIYK 287


>gi|40882439|gb|AAR96131.1| RH62603p [Drosophila melanogaster]
          Length = 465

 Score = 51.7 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++D  G+T GKGF G   R +   L          R     G    P RV   
Sbjct: 220 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 276

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 277 VARAGQKGYHHRTEINKKIYRI 298


>gi|38327504|gb|AAR17783.1| ribosomal protein L3 [Solanum lycopersicum]
          Length = 389

 Score = 51.7 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 41/131 (31%), Gaps = 6/131 (4%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + +     K  +     + V+      +  V                 F   +++D
Sbjct: 163 LAHTQIRKMKGLKQKKAHLMEIQVNGGSIAQK--VDFAYGFFEKQVPVDA-VFQKDEMID 219

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           + G+T GKG+ G + R     L          R     G    P RV      AG+ G +
Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYH 276

Query: 171 RVTVKNLEVVS 181
             T  N +V  
Sbjct: 277 HRTEMNKKVYK 287


>gi|291223744|ref|XP_002731867.1| PREDICTED: ribosomal protein L3-like [Saccoglossus kowalevskii]
          Length = 404

 Score = 51.7 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 31/81 (38%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKGF G   R     L          R     G    P RV    
Sbjct: 210 VFVQDEMIDVIGVTKGKGFKGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPARVGYGV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N +V  +
Sbjct: 267 ARAGQKGYHHRTELNKKVYRI 287


>gi|237834163|ref|XP_002366379.1| 60S ribosomal protein L3, putative [Toxoplasma gondii ME49]
 gi|211964043|gb|EEA99238.1| 60S ribosomal protein L3, putative [Toxoplasma gondii ME49]
 gi|221486606|gb|EEE24867.1| 60S ribosomal protein L3, putative [Toxoplasma gondii GT1]
 gi|221508362|gb|EEE33949.1| 60S ribosomal protein L3, putative [Toxoplasma gondii VEG]
          Length = 389

 Score = 51.7 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + FT G+++DV G+T G G  G + R     L          R     G    P RV   
Sbjct: 206 AVFTEGEMIDVIGVTKGHGVKGVVSRWGVTRLP--RKTHRGLRKIACIGAW-HPARVQFQ 262

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
               G+ G    T  N +V  V
Sbjct: 263 VPRHGQKGYFHRTEMNKKVYRV 284


>gi|325118597|emb|CBZ54148.1| 60S ribosomal protein L3, related [Neospora caninum Liverpool]
          Length = 398

 Score = 51.7 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + FT G+++DV G+T G G  G + R     L          R     G    P RV   
Sbjct: 206 AVFTEGEMLDVIGVTKGHGVKGVVSRWGVTRLP--RKTHRGLRKIACIGAW-HPARVQFQ 262

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
               G+ G    T  N +V  V
Sbjct: 263 VPRHGQKGYFHRTEMNKKVYRV 284


>gi|50549253|ref|XP_502097.1| YALI0C21560p [Yarrowia lipolytica]
 gi|49647964|emb|CAG82417.1| YALI0C21560p [Yarrowia lipolytica]
          Length = 387

 Score = 51.7 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 43/138 (31%), Gaps = 34/138 (24%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++D   +T GKG+ G   R     L          R     G    P  V    
Sbjct: 208 VFEQDEMIDAIAITKGKGYEGTTHRWGTKKLP--RKTHRGLRKVACIGAW-HPANVQYTV 264

Query: 162 KMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLILV 191
             +G+ G +  T  N +V  V                              +     +++
Sbjct: 265 ARSGQDGYHHRTSANHKVYRVGKGGDESNGSTEFDRTPKTITPMGGFVRYGEVNNDFLIL 324

Query: 192 KGCVPGAKKNSWILVRDS 209
           KG +PG KK   I +R S
Sbjct: 325 KGSIPGVKKR-VITLRKS 341


>gi|321477553|gb|EFX88511.1| hypothetical protein DAPPUDRAFT_206128 [Daphnia pulex]
          Length = 412

 Score = 51.7 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV G+T GKGF G   R +   L          R     G    P RV   
Sbjct: 209 SLFAQDEMIDVIGVTKGKGFKGVTSRWHTRKLP--RKTHKGLRKVACIGAW-HPSRVQYT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEMNKKIYRI 287


>gi|291410166|ref|XP_002721357.1| PREDICTED: ribosomal protein L3-like isoform 2 [Oryctolagus
           cuniculus]
          Length = 351

 Score = 51.7 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 66/203 (32%), Gaps = 31/203 (15%)

Query: 3   SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
           +  +  K G+T +    +  G  +        VT++      V+        GY+    G
Sbjct: 41  TAFLGYKAGLTHIVQEVDRPGSEVNKKEVVEAVTIVETPPMVVMGIV-----GYVETPRG 95

Query: 53  ---AGEAKVKNVSKPMRGFFSS--VNVSPKKKLFEFRVQKDDDLLPV--------GSVFS 99
                    +++S   +  F         K  L E +V        +          V  
Sbjct: 96  LRTFKMMFAEHISDKCKRRFYKNWHKSKKKAHLMEIQVNGGTVAEKLDWARERLEQQVPV 155

Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
              F   +++DV G+T GKG+     R +   L   H      R     G    P RV  
Sbjct: 156 SQVFGQDEMIDVIGVTKGKGYKAVTSRWHTKKLP--HKTHRGLRKVACIGAW-HPARVAF 212

Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182
           +   AG+ G +  T  N ++  +
Sbjct: 213 SVAWAGQKGYHHRTEINKKIYKI 235


>gi|82623411|gb|ABB87120.1| ribosomal protein L3-like [Solanum tuberosum]
          Length = 389

 Score = 51.7 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 41/131 (31%), Gaps = 6/131 (4%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + +     K  +     + V+      +  V                 F   +++D
Sbjct: 163 LAHTQIRKMKGLKQKKAHLMEIQVNGGSIAQK--VDFAYGFFEKQVPVDA-VFQKDEMID 219

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           + G+T GKG+ G + R     L          R     G    P RV      AG+ G +
Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYH 276

Query: 171 RVTVKNLEVVS 181
             T  N +V  
Sbjct: 277 HRTEMNKKVYK 287


>gi|118152392|gb|ABK63940.1| ribosomal protein L3-A2-II [Triticum aestivum]
          Length = 401

 Score = 51.3 bits (122), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 43/123 (34%), Gaps = 19/123 (15%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   ++VD+ G+T GKG+ G + R     L          R     G    P RV   
Sbjct: 210 AVFQKDEMVDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYT 266

Query: 161 KKMAGRMGGNRVTVKNLEVVS--------------VDDKRGLILVKGCVP--GAKKNSWI 204
              AG+ G +  T  N ++                 D     I   G  P  G  K  ++
Sbjct: 267 VARAGQNGYHHRTEMNKKIYKMGKSGQESHEACTEFDRTEKDITPMGGFPHYGVVKGDYL 326

Query: 205 LVR 207
           +++
Sbjct: 327 MIK 329


>gi|332028947|gb|EGI68965.1| 60S ribosomal protein L3 [Acromyrmex echinatior]
          Length = 484

 Score = 51.3 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV G+T GKG+ G   R +   L          R     G    P RV   
Sbjct: 279 SVFASDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFT 335

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 336 VARAGQKGYHHRTEMNKKIYRI 357


>gi|297795267|ref|XP_002865518.1| hypothetical protein ARALYDRAFT_917513 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297311353|gb|EFH41777.1| hypothetical protein ARALYDRAFT_917513 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 375

 Score = 51.3 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 4/91 (4%)

Query: 92  LPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
           +  G++      F   +++DV G+T GKG+ G + R     L          R     G 
Sbjct: 186 INGGTIIPIDAVFQKDEMIDVIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLREVACIGA 243

Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
              P RV      AG+ G +  T  N ++  
Sbjct: 244 W-HPARVSYTVARAGQNGYHHRTELNKKIYR 273


>gi|195389887|ref|XP_002053605.1| GJ23255 [Drosophila virilis]
 gi|194151691|gb|EDW67125.1| GJ23255 [Drosophila virilis]
          Length = 415

 Score = 51.3 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++D  G+T GKGF G   R +   L          R     G    P RV   
Sbjct: 209 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEINKKIYRI 287


>gi|255641019|gb|ACU20789.1| unknown [Glycine max]
          Length = 323

 Score = 51.3 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++D+ G+T GKG+ G + R     L          R     G    P RV   
Sbjct: 210 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFT 266

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N  +  V
Sbjct: 267 VARAGQNGYHHRTELNKRIYKV 288


>gi|109100342|ref|XP_001106678.1| PREDICTED: 60S ribosomal protein L3-like isoform 1 [Macaca mulatta]
          Length = 354

 Score = 51.3 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 67/203 (33%), Gaps = 31/203 (15%)

Query: 3   SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
           +  +  K GMT +    +  G ++        VT++ +    VV        GY+    G
Sbjct: 44  TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVEMPPMVVVGI-----AGYVETPRG 98

Query: 53  ---AGEAKVKNVSKPMRGFFSS--VNVSPKKKLFEFRVQKDDDLLPV--------GSVFS 99
                    +++    +  F         K  L E +V        +          V  
Sbjct: 99  LRTFKTVFAEHMGDECKRRFYKNWHKSKKKAHLTEIQVNGGTVAEKLDWARERLEQQVPV 158

Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
              F   +++DV G+T GKG+ G     +   L          R     G R  P RV  
Sbjct: 159 NQVFGQDEMIDVIGVTKGKGYKGVTSHWHTKKLP--RKTHRGLRKVACIGAR-HPARVAF 215

Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182
           +   AG+ G +  T  N ++  +
Sbjct: 216 SVARAGQKGYHHRTEINKKIYKI 238


>gi|84095076|dbj|BAE66653.1| ribosomal protein L3 [Papilio xuthus]
          Length = 412

 Score = 51.3 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++D  G+T GKG+ G   R +   L          R     G    P RV   
Sbjct: 209 SVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEMNKKIYRI 287


>gi|145324164|ref|NP_001077671.1| ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1); structural constituent of
           ribosome [Arabidopsis thaliana]
 gi|332193833|gb|AEE31954.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
          Length = 306

 Score = 51.3 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 41/131 (31%), Gaps = 6/131 (4%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + +     K  +     + ++      +  V                 F   +++D
Sbjct: 80  LAHTQIRKMKGLKQKKAHMMEIQINGGTIAQK--VDFAYSFFEKQIPIEA-VFQKDEMID 136

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           + G+T GKG+ G + R     L          R     G    P RV      AG+ G +
Sbjct: 137 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYTVARAGQNGYH 193

Query: 171 RVTVKNLEVVS 181
             T  N ++  
Sbjct: 194 HRTELNKKIYR 204


>gi|189240524|ref|XP_971875.2| PREDICTED: similar to ribosomal protein L3e [Tribolium castaneum]
 gi|270011378|gb|EFA07826.1| hypothetical protein TcasGA2_TC005395 [Tribolium castaneum]
          Length = 409

 Score = 51.3 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 3/83 (3%)

Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
              F   +++D  G+T GKG+ G   R +   L          R     G    P RV  
Sbjct: 208 AQVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSF 264

Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182
               AG+ G +  T  N ++  +
Sbjct: 265 TVARAGQKGYHHRTEMNKKIYRI 287


>gi|308490853|ref|XP_003107618.1| CRE-RPL-3 protein [Caenorhabditis remanei]
 gi|308250487|gb|EFO94439.1| CRE-RPL-3 protein [Caenorhabditis remanei]
          Length = 401

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 4/87 (4%)

Query: 97  VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
                  F+  +++D  G+T G GF G   R +   L          R     G    P 
Sbjct: 204 QIQVDTVFSQDEMIDTIGVTKGHGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPS 260

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           RV      AG+ G +  T+ N ++  +
Sbjct: 261 RVAFTVARAGQKGFHHRTIINNKIYKI 287


>gi|195329914|ref|XP_002031655.1| GM23925 [Drosophila sechellia]
 gi|194120598|gb|EDW42641.1| GM23925 [Drosophila sechellia]
          Length = 611

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++D  G+T GKGF G   R +   L          R     G    P RV   
Sbjct: 209 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEINKKIYRI 287


>gi|121543847|gb|ABM55588.1| putative ribosomal protein L3 [Maconellicoccus hirsutus]
          Length = 406

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 68/244 (27%), Gaps = 70/244 (28%)

Query: 6   VARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH----------------- 38
           +  K GMT V    +  G ++       PVT++      +V                   
Sbjct: 47  LGYKAGMTHVVREADRPGSKVNKKEIVEPVTIIETPPMVIVGVVGYIETPHGLKALSTVW 106

Query: 39  ---------RTLDKNGYMAVQVGAGEAKVKN--------VSKPMRGFFSSVNV------- 74
                    R   KN Y A +    +A  K         + K +        V       
Sbjct: 107 AEHLSEDCRRRFYKNWYKAKKRAFTKASKKWQDPLGRKAIDKELAKISKYCKVVRVIAHT 166

Query: 75  --------SPKKKLFEFRVQKDDDLLPVG-------SVFSPSY-FTVGQLVDVTGMTIGK 118
                     K  + E +V        V             S+ F   +++D   +T GK
Sbjct: 167 QMKLLKFRQKKSHIMEIQVNGGTVPEKVQWAKAHFEKAVPVSHVFAQDEMIDCIAVTKGK 226

Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
           G+ G   R +   L          R     G    P RV      AG+ G +  T  N +
Sbjct: 227 GYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFTVARAGQKGYHHRTEINKK 283

Query: 179 VVSV 182
           +  +
Sbjct: 284 IYRI 287


>gi|268306352|gb|ACY95297.1| ribosomal protein L3 [Manduca sexta]
          Length = 414

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++D  G+T GKG+ G   R +   L          R     G    P RV   
Sbjct: 209 SVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEMNKKIYRI 287


>gi|198455295|ref|XP_001359937.2| GA18487 [Drosophila pseudoobscura pseudoobscura]
 gi|198133184|gb|EAL29089.2| GA18487 [Drosophila pseudoobscura pseudoobscura]
          Length = 412

 Score = 51.3 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++D  G+T GKGF G   R +   L          R     G    P RV   
Sbjct: 209 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEINKKIYRI 287


>gi|15218306|ref|NP_175009.1| ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1); structural constituent of
           ribosome [Arabidopsis thaliana]
 gi|42571751|ref|NP_973966.1| ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1); structural constituent of
           ribosome [Arabidopsis thaliana]
 gi|79319275|ref|NP_001031146.1| ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1); structural constituent of
           ribosome [Arabidopsis thaliana]
 gi|27735225|sp|P17094|RL31_ARATH RecName: Full=60S ribosomal protein L3-1; AltName: Full=Protein
           EMBRYO DEFECTIVE 2207
 gi|11935191|gb|AAG42011.1|AF327421_1 putative ribosomal protein [Arabidopsis thaliana]
 gi|13487800|gb|AAK27726.1|AF361101_1 putative ribosomal protein [Arabidopsis thaliana]
 gi|13605657|gb|AAK32822.1|AF361809_1 At1g43170/F1I21_18 [Arabidopsis thaliana]
 gi|3617741|gb|AAC36018.1| L3 cytoplasmic ribosomal protein [Arabidopsis thaliana]
 gi|14517418|gb|AAK62599.1| At1g43170/F1I21_18 [Arabidopsis thaliana]
 gi|15450559|gb|AAK96457.1| At1g43170/F1I21_18 [Arabidopsis thaliana]
 gi|15982761|gb|AAL09721.1| At1g43170/F1I21_18 [Arabidopsis thaliana]
 gi|332193830|gb|AEE31951.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
 gi|332193831|gb|AEE31952.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
 gi|332193832|gb|AEE31953.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
 gi|332193834|gb|AEE31955.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
 gi|332193835|gb|AEE31956.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
 gi|332193836|gb|AEE31957.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
 gi|332193837|gb|AEE31958.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
 gi|332193838|gb|AEE31959.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
          Length = 389

 Score = 50.9 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 41/131 (31%), Gaps = 6/131 (4%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + +     K  +     + ++      +  V                 F   +++D
Sbjct: 163 LAHTQIRKMKGLKQKKAHMMEIQINGGTIAQK--VDFAYSFFEKQIPIEA-VFQKDEMID 219

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           + G+T GKG+ G + R     L          R     G    P RV      AG+ G +
Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYTVARAGQNGYH 276

Query: 171 RVTVKNLEVVS 181
             T  N ++  
Sbjct: 277 HRTELNKKIYR 287


>gi|195107417|ref|XP_001998310.1| GI23698 [Drosophila mojavensis]
 gi|193914904|gb|EDW13771.1| GI23698 [Drosophila mojavensis]
          Length = 415

 Score = 50.9 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   ++VD  G+T GKGF G   R +   L          R     G    P RV   
Sbjct: 210 NVFGQDEMVDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 266

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 267 VARAGQKGYHHRTEINKKIYRI 288


>gi|23397228|gb|AAN31896.1| putative ribosomal protein [Arabidopsis thaliana]
          Length = 389

 Score = 50.9 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 41/131 (31%), Gaps = 6/131 (4%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + +     K  +     + ++      +  V                 F   +++D
Sbjct: 163 LAHTQIRKMKGLKQKKAHMMEIQINGGTIAQK--VDFAYSFFEKQIPIEA-VFQKDEMID 219

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           + G+T GKG+ G + R     L          R     G    P RV      AG+ G +
Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYTVARAGQNGYH 276

Query: 171 RVTVKNLEVVS 181
             T  N ++  
Sbjct: 277 HRTELNKKIYR 287


>gi|112982798|ref|NP_001037126.1| ribosomal protein L3 [Bombyx mori]
 gi|54609193|gb|AAV34812.1| ribosomal protein L3 [Bombyx mori]
          Length = 413

 Score = 50.9 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++D  G+T GKG+ G   R +   L          R     G    P RV   
Sbjct: 209 SVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEMNKKIYRI 287


>gi|166858|gb|AAA66160.1| ribosomal protein [Arabidopsis thaliana]
          Length = 389

 Score = 50.9 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 41/131 (31%), Gaps = 6/131 (4%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + +     K  +     + ++      +  V                 F   +++D
Sbjct: 163 LAHTQIRKMKGLKQKKAHMMEIQINGGTIAQK--VDFAYSFFEKQIPIEA-VFQKDEMID 219

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           + G+T GKG+ G + R     L          R     G    P RV      AG+ G +
Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYTVARAGQNGYH 276

Query: 171 RVTVKNLEVVS 181
             T  N ++  
Sbjct: 277 HRTELNKKIYR 287


>gi|254693009|gb|ACT79354.1| LP14077p [Drosophila melanogaster]
          Length = 418

 Score = 50.9 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++D  G+T GKGF G   R +   L          R     G    P RV   
Sbjct: 211 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 267

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 268 VARAGQKGYHHRTEINKKIYRI 289


>gi|256000845|gb|ACU51763.1| RE52161p [Drosophila melanogaster]
          Length = 316

 Score = 50.9 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++D  G+T GKGF G   R +   L          R     G    P RV   
Sbjct: 109 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 165

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 166 VARAGQKGYHHRTEINKKIYRI 187


>gi|18253047|gb|AAL62468.1| ribosomal protein L3 [Spodoptera frugiperda]
          Length = 413

 Score = 50.9 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++D  G+T GKG+ G   R +   L          R     G    P RV   
Sbjct: 209 SVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEMNKKIYRI 287


>gi|321458193|gb|EFX69265.1| hypothetical protein DAPPUDRAFT_301006 [Daphnia pulex]
          Length = 416

 Score = 50.9 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV G+T GKGF G   R +   L          R     G    P RV   
Sbjct: 209 SLFAQDEMIDVIGVTKGKGFKGVTSRWHTRKLP--RKTHKGLRKVACIGAW-HPSRVQFT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEMNKKIYRI 287


>gi|17737907|ref|NP_524316.1| ribosomal protein L3, isoform A [Drosophila melanogaster]
 gi|195571809|ref|XP_002103895.1| GD18739 [Drosophila simulans]
 gi|3122718|sp|O16797|RL3_DROME RecName: Full=60S ribosomal protein L3
 gi|2384754|gb|AAC26144.1| ribosomal protein L3 [Drosophila melanogaster]
 gi|23170971|gb|AAF54610.2| ribosomal protein L3, isoform A [Drosophila melanogaster]
 gi|194199822|gb|EDX13398.1| GD18739 [Drosophila simulans]
          Length = 416

 Score = 50.9 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++D  G+T GKGF G   R +   L          R     G    P RV   
Sbjct: 209 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEINKKIYRI 287


>gi|195157752|ref|XP_002019760.1| GL12566 [Drosophila persimilis]
 gi|194116351|gb|EDW38394.1| GL12566 [Drosophila persimilis]
          Length = 415

 Score = 50.9 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++D  G+T GKGF G   R +   L          R     G    P RV   
Sbjct: 209 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEINKKIYRI 287


>gi|195499987|ref|XP_002097183.1| GE26079 [Drosophila yakuba]
 gi|194183284|gb|EDW96895.1| GE26079 [Drosophila yakuba]
          Length = 416

 Score = 50.9 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++D  G+T GKGF G   R +   L          R     G    P RV   
Sbjct: 209 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEINKKIYRI 287


>gi|194902102|ref|XP_001980590.1| GG17978 [Drosophila erecta]
 gi|190652293|gb|EDV49548.1| GG17978 [Drosophila erecta]
          Length = 416

 Score = 50.9 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++D  G+T GKGF G   R +   L          R     G    P RV   
Sbjct: 209 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEINKKIYRI 287


>gi|312385734|gb|EFR30160.1| hypothetical protein AND_00422 [Anopheles darlingi]
          Length = 405

 Score = 50.9 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F+  +++D   +T GKGF G   R +   L          R     G    P RV    
Sbjct: 197 VFSQDEMIDCVAVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVAFTV 253

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 254 ARAGQKGYHHRTELNKKIYRI 274


>gi|156544034|ref|XP_001600115.1| PREDICTED: similar to ribosomal protein L3 [Nasonia vitripennis]
          Length = 419

 Score = 50.9 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 3/85 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++DV G+T GKG+ G   R +   L          R     G    P RV   
Sbjct: 209 NVFAPDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDK 185
              AG+ G +  T  N ++  +  +
Sbjct: 266 VARAGQKGYHHRTEMNKKIYRIGQE 290


>gi|66566113|ref|XP_624821.1| PREDICTED: 60S ribosomal protein L3 [Apis mellifera]
          Length = 415

 Score = 50.9 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++DV G+T GKG+ G   R +   L          R     G    P RV   
Sbjct: 209 NVFAPDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEMNKKIYRI 287


>gi|195453495|ref|XP_002073813.1| GK14309 [Drosophila willistoni]
 gi|194169898|gb|EDW84799.1| GK14309 [Drosophila willistoni]
          Length = 414

 Score = 50.9 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   ++VD  G+T GKGF G   R +   L          R     G    P RV   
Sbjct: 209 NVFGQDEMVDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEINKKIYRI 287


>gi|170578047|ref|XP_001894243.1| 60S ribosomal protein L3 [Brugia malayi]
 gi|158599245|gb|EDP36917.1| 60S ribosomal protein L3, putative [Brugia malayi]
          Length = 430

 Score = 50.9 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++D  G+T GKGF G   R +   L          R     G    P RV   
Sbjct: 243 SVFAQDEMIDTIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFT 299

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 300 VARAGQKGYHHRTEVNKKIYRI 321


>gi|195055484|ref|XP_001994649.1| GH14923 [Drosophila grimshawi]
 gi|193892412|gb|EDV91278.1| GH14923 [Drosophila grimshawi]
          Length = 417

 Score = 50.9 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   ++VD  G+T GKGF G   R +   L          R     G    P RV    
Sbjct: 210 VFGQDEMVDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTTV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYRI 287


>gi|194743868|ref|XP_001954422.1| GF16740 [Drosophila ananassae]
 gi|190627459|gb|EDV42983.1| GF16740 [Drosophila ananassae]
          Length = 415

 Score = 50.9 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++D  G+T GKGF G   R +   L          R     G    P RV   
Sbjct: 209 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEINKKIYRI 287


>gi|297846744|ref|XP_002891253.1| hypothetical protein ARALYDRAFT_473757 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337095|gb|EFH67512.1| hypothetical protein ARALYDRAFT_473757 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 389

 Score = 50.9 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 41/131 (31%), Gaps = 6/131 (4%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + +     K  +     + ++      +  V                 F   +++D
Sbjct: 163 LAHTQIRKMKGLKQKKAHMMEIQINGGTIAQK--VDFAYSFFEKQIPIEA-VFQKDEMID 219

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           + G+T GKG+ G + R     L          R     G    P RV      AG+ G +
Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYTVARAGQNGYH 276

Query: 171 RVTVKNLEVVS 181
             T  N ++  
Sbjct: 277 HRTELNKKIYR 287


>gi|306922439|gb|ADN07433.1| RE73632p [Drosophila melanogaster]
          Length = 208

 Score = 50.5 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++D  G+T GKGF G   R +   L          R     G    P RV   
Sbjct: 109 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 165

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 166 VARAGQKGYHHRTEINKKIYRI 187


>gi|289743297|gb|ADD20396.1| ribosomal protein L3 [Glossina morsitans morsitans]
          Length = 413

 Score = 50.5 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++D  G+T GKGF G   R +   L          R     G    P RV   
Sbjct: 209 NVFGQDEMIDCIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEINKKIYRI 287


>gi|115725235|ref|XP_791350.2| PREDICTED: similar to Ribosomal protein L3 [Strongylocentrotus
           purpuratus]
 gi|115968341|ref|XP_001177867.1| PREDICTED: similar to Ribosomal protein L3 [Strongylocentrotus
           purpuratus]
          Length = 404

 Score = 50.5 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 30/82 (36%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F   +L+D+ G+T G GF G   R     L          R     G    P RV   
Sbjct: 209 EVFGQDELIDIIGVTKGHGFKGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPARVGYG 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N +V  V
Sbjct: 266 VARAGQKGYHHRTEINKKVYRV 287


>gi|5762260|dbj|BAA83471.1| Csf-3 [Cucumis sativus]
          Length = 219

 Score = 50.5 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++D+ G+T GKG+ G + R     L          R     G    P RV   
Sbjct: 40  AVFQKDEMIDLIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFT 96

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N +V  +
Sbjct: 97  VARAGQNGYHHRTEMNKKVYKI 118


>gi|37654302|gb|AAQ96256.1| LRRGT00043 [Rattus norvegicus]
          Length = 867

 Score = 50.5 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F  G+++DV GMT GKG+ G   R +              R     G        F   
Sbjct: 349 VFGQGEMIDVMGMTKGKGYKGVTSRWHTKKPP--RKTHQGLRKVACIGAWLPAHVAFS-V 405

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 406 ARAGQKGYHHQTETNKKIYKI 426


>gi|264667433|gb|ACY71302.1| ribosomal protein L3 [Chrysomela tremulae]
          Length = 414

 Score = 50.5 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F   +++D  G+T G G+ G   R +   L          R     G    P RV   
Sbjct: 209 EVFAQDEMIDCIGVTKGHGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEMNKKIYRI 287


>gi|124802670|ref|XP_001347556.1| 60S ribosomal protein L3, putative [Plasmodium falciparum 3D7]
 gi|23495138|gb|AAN35469.1| 60S ribosomal protein L3, putative [Plasmodium falciparum 3D7]
          Length = 386

 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 45/127 (35%), Gaps = 9/127 (7%)

Query: 56  AKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMT 115
                + K           S K+KL EF  +  +  LPV +V     F   +++DV  +T
Sbjct: 165 KTPLRMKKAHIMEVQINGGSMKEKL-EFVKEMLEKNLPVSTV-----FNPNEMIDVISVT 218

Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
            G G  G + R+    L          R     G    P RV       G+ G    T +
Sbjct: 219 KGHGTKGVVSRYGVKRLP--RKTHRGLRKVACIGAW-HPARVQFQIPRHGQKGYFHRTER 275

Query: 176 NLEVVSV 182
           N ++  +
Sbjct: 276 NKKIYRI 282


>gi|168060915|ref|XP_001782438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666109|gb|EDQ52773.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 392

 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 63/204 (30%), Gaps = 41/204 (20%)

Query: 46  YMAVQ--VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
           Y +V   +   + +     K  +   + + V+      +     +    PV        F
Sbjct: 156 YASVIRVLAHTQVRKLKGIKQKKAHLAEIQVNGGTIAEKVDFGYNLFEKPV--PVDA-VF 212

Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
              +++D+ G+T G G+ G + R     L          R     G    P RV      
Sbjct: 213 NKDEMIDIIGVTRGHGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVAR 269

Query: 164 AGRMGGNRVTVKNLEVVSV--------------------------------DDKRGLILV 191
           AG+ G +  T  N +V  V                                  +   +++
Sbjct: 270 AGQNGYHHRTEMNKKVYKVGKSADKESFSASTEFDVTEKEITPMGGFAHYGIVREDYLMI 329

Query: 192 KGCVPGAKKNSWILVRDSFKSAVN 215
           KG V G KK   I +R S    V+
Sbjct: 330 KGGVMGPKKR-VITLRQSLYKQVS 352


>gi|302769558|ref|XP_002968198.1| hypothetical protein SELMODRAFT_270706 [Selaginella moellendorffii]
 gi|300163842|gb|EFJ30452.1| hypothetical protein SELMODRAFT_270706 [Selaginella moellendorffii]
          Length = 389

 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 46/137 (33%), Gaps = 4/137 (2%)

Query: 46  YMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105
           Y +V       KV+N+    +     + +         +V    +          S F  
Sbjct: 156 YGSVIRVLAHTKVRNLKGIKQKKAHLMEIQVNGGTTAEKVDFAYNFFEKAVPID-SVFRK 214

Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
            +++DV G+T G G+ G + R     L          R     G    P RV      AG
Sbjct: 215 DEMIDVIGVTKGHGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAG 271

Query: 166 RMGGNRVTVKNLEVVSV 182
           + G +  T  N ++  +
Sbjct: 272 QNGYHHRTEMNKKIYKI 288


>gi|70909601|emb|CAJ17226.1| ribosomal protein L3e [Scarabaeus laticollis]
          Length = 410

 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++D  G+T GKG+ G   R +   L          R     G    P RV   
Sbjct: 209 NVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEMNKKIYRI 287


>gi|302788822|ref|XP_002976180.1| hypothetical protein SELMODRAFT_267945 [Selaginella moellendorffii]
 gi|300156456|gb|EFJ23085.1| hypothetical protein SELMODRAFT_267945 [Selaginella moellendorffii]
          Length = 389

 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 46/137 (33%), Gaps = 4/137 (2%)

Query: 46  YMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105
           Y +V       KV+N+    +     + +         +V    +          S F  
Sbjct: 156 YGSVIRVLAHTKVRNLKGIKQKKAHLMEIQVNGGTTAEKVDFAYNFFEKAVPID-SVFRK 214

Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
            +++DV G+T G G+ G + R     L          R     G    P RV      AG
Sbjct: 215 DEMIDVIGVTKGHGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAG 271

Query: 166 RMGGNRVTVKNLEVVSV 182
           + G +  T  N ++  +
Sbjct: 272 QNGYHHRTEMNKKIYKI 288


>gi|118152396|gb|ABK63942.1| ribosomal protein L3-A3 [Triticum aestivum]
 gi|118152398|gb|ABK63943.1| ribosomal protein L3-A3 [Triticum aestivum]
 gi|146141400|tpg|DAA01148.1| TPA_inf: ribosomal protein L3A-3 [Triticum aestivum]
          Length = 389

 Score = 50.5 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   ++VD+ G+T GKG+ G + R     L          R     G    P RV   
Sbjct: 210 AVFQKDEMVDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYT 266

Query: 161 KKMAGRMGGNRVTVKNLEVVS 181
              AG+ G +  T  N ++  
Sbjct: 267 VARAGQNGYHHRTEMNKKIYK 287


>gi|226480220|emb|CAX78774.1| ribosomal protein L3 [Schistosoma japonicum]
          Length = 327

 Score = 50.2 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F+  +++DV G+T GKGF G   R +   L          R     G    P RV ++
Sbjct: 117 NVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVARS 173

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G    T  N ++  +
Sbjct: 174 VARAGQKGYFHRTELNKKIYRI 195


>gi|33526886|gb|AAQ21397.1| ribosomal protein L3 [Triticum aestivum]
 gi|33526907|gb|AAQ21398.1| ribosomal protein L3 [Triticum aestivum]
 gi|34105766|gb|AAQ62074.1| ribosomal protein L3 [Triticum aestivum]
 gi|118152391|gb|ABK63939.1| ribosomal protein L3-A2-I [Triticum aestivum]
 gi|118152394|gb|ABK63941.1| ribosomal protein L3-A2 [Triticum aestivum]
 gi|146141398|tpg|DAA01147.1| TPA_inf: ribosomal protein L3A-2 [Triticum aestivum]
          Length = 389

 Score = 50.2 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   ++VD+ G+T GKG+ G + R     L          R     G    P RV   
Sbjct: 210 AVFQKDEMVDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYT 266

Query: 161 KKMAGRMGGNRVTVKNLEVVS 181
              AG+ G +  T  N ++  
Sbjct: 267 VARAGQNGYHHRTEMNKKIYK 287


>gi|313103624|pdb|3IZ5|C Chain C, Localization Of The Large Subunit Ribosomal Proteins Into
           A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
           Ribosome
 gi|315113296|pdb|3IZR|C Chain C, Localization Of The Large Subunit Ribosomal Proteins Into
           A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
           Ribosome
 gi|33526877|gb|AAQ21396.1| ribosomal protein L3 [Triticum aestivum]
 gi|33526922|gb|AAQ21399.1| ribosomal protein L3 [Triticum aestivum]
 gi|34105776|gb|AAQ62079.1| ribosomal protein L3 [Triticum aestivum]
 gi|118152406|gb|ABK63947.1| ribosomal protein L3-A1 [Triticum aestivum]
 gi|146141402|tpg|DAA01149.1| TPA_inf: ribosomal protein L3A-1 [Triticum aestivum]
          Length = 389

 Score = 50.2 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   ++VD+ G+T GKG+ G + R     L          R     G    P RV   
Sbjct: 210 AVFQKDEMVDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYT 266

Query: 161 KKMAGRMGGNRVTVKNLEVVS 181
              AG+ G +  T  N ++  
Sbjct: 267 VARAGQNGYHHRTEMNKKIYK 287


>gi|307204449|gb|EFN83156.1| 60S ribosomal protein L3 [Harpegnathos saltator]
          Length = 402

 Score = 50.2 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV G+T GKG+ G   R +   L          R     G    P RV   
Sbjct: 196 SVFARDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFT 252

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 253 VARAGQKGYHHRTEMNKKIYRI 274


>gi|291410164|ref|XP_002721356.1| PREDICTED: ribosomal protein L3-like isoform 1 [Oryctolagus
           cuniculus]
          Length = 400

 Score = 50.2 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+     R +   L   H      R     G    P RV  + 
Sbjct: 207 VFGQDEMIDVIGVTKGKGYKAVTSRWHTKKLP--HKTHRGLRKVACIGAW-HPARVAFSV 263

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 264 AWAGQKGYHHRTEINKKIYKI 284


>gi|193580256|ref|XP_001951042.1| PREDICTED: 60S ribosomal protein L3-like [Acyrthosiphon pisum]
          Length = 408

 Score = 50.2 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 31/81 (38%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++D  G+T G+G+ G   R +   L          R     G    P RV    
Sbjct: 210 VFAPDEMIDCIGVTKGRGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFTV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYRI 287


>gi|71984538|ref|NP_001021254.1| Ribosomal Protein, Large subunit family member (rpl-3)
           [Caenorhabditis elegans]
 gi|1710557|sp|P50880|RL3_CAEEL RecName: Full=60S ribosomal protein L3
 gi|1181129|emb|CAA93269.1| ribosomal protein L3 [Caenorhabditis elegans]
 gi|1181131|emb|CAA93268.1| ribosomal protein L3 [Caenorhabditis elegans]
 gi|3874745|emb|CAA91277.1| C. elegans protein F13B10.2a, confirmed by transcript evidence
           [Caenorhabditis elegans]
 gi|3875827|emb|CAA90183.1| C. elegans protein F13B10.2a, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 401

 Score = 50.2 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++D  G+T G GF G   R +   L          R     G    P RV    
Sbjct: 210 VFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVAFTV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T+ N ++  +
Sbjct: 267 ARAGQKGFHHRTIINNKIYRI 287


>gi|75107053|sp|P82191|RK3_SPIOL RecName: Full=50S ribosomal protein L3, chloroplastic
          Length = 45

 Score = 50.2 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 3  SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTL 41
           GV+  KLGM   +  +G  +PVTV+   +   V   +T 
Sbjct: 6  IGVMGTKLGMMSFFEEDGTVVPVTVIGFKEGNIVTQVKTE 45


>gi|226475914|emb|CAX72047.1| ribosomal protein L3 [Schistosoma japonicum]
          Length = 419

 Score = 50.2 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F+  +++DV G+T GKGF G   R +   L          R     G    P RV ++
Sbjct: 209 NVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVARS 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G    T  N ++  +
Sbjct: 266 VARAGQKGYFHRTELNKKIYRI 287


>gi|226480222|emb|CAX78775.1| ribosomal protein L3 [Schistosoma japonicum]
          Length = 419

 Score = 50.2 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F+  +++DV G+T GKGF G   R +   L          R     G    P RV ++
Sbjct: 209 NVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVARS 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G    T  N ++  +
Sbjct: 266 VARAGQKGYFHRTELNKKIYRI 287


>gi|226475922|emb|CAX72051.1| ribosomal protein L3 [Schistosoma japonicum]
          Length = 328

 Score = 50.2 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F+  +++DV G+T GKGF G   R +   L          R     G    P RV ++
Sbjct: 118 NVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVARS 174

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G    T  N ++  +
Sbjct: 175 VARAGQKGYFHRTELNKKIYRI 196


>gi|226475916|emb|CAX72048.1| ribosomal protein L3 [Schistosoma japonicum]
          Length = 419

 Score = 50.2 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F+  +++DV G+T GKGF G   R +   L          R     G    P RV ++
Sbjct: 209 NVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVARS 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G    T  N ++  +
Sbjct: 266 VARAGQKGYFHRTELNKKIYRI 287


>gi|29841161|gb|AAP06174.1| SJCHGC06297 protein [Schistosoma japonicum]
 gi|226475918|emb|CAX72049.1| ribosomal protein L3 [Schistosoma japonicum]
 gi|226475924|emb|CAX72052.1| ribosomal protein L3 [Schistosoma japonicum]
 gi|226475926|emb|CAX72053.1| ribosomal protein L3 [Schistosoma japonicum]
 gi|226475928|emb|CAX72054.1| ribosomal protein L3 [Schistosoma japonicum]
 gi|226480226|emb|CAX78777.1| ribosomal protein L3 [Schistosoma japonicum]
 gi|226480228|emb|CAX78778.1| ribosomal protein L3 [Schistosoma japonicum]
 gi|226480236|emb|CAX78782.1| ribosomal protein L3 [Schistosoma japonicum]
 gi|226480238|emb|CAX78783.1| ribosomal protein L3 [Schistosoma japonicum]
 gi|226480240|emb|CAX78784.1| ribosomal protein L3 [Schistosoma japonicum]
 gi|226480242|emb|CAX78785.1| ribosomal protein L3 [Schistosoma japonicum]
 gi|226480244|emb|CAX78786.1| ribosomal protein L3 [Schistosoma japonicum]
          Length = 419

 Score = 50.2 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F+  +++DV G+T GKGF G   R +   L          R     G    P RV ++
Sbjct: 209 NVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVARS 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G    T  N ++  +
Sbjct: 266 VARAGQKGYFHRTELNKKIYRI 287


>gi|156359547|ref|XP_001624829.1| predicted protein [Nematostella vectensis]
 gi|156211631|gb|EDO32729.1| predicted protein [Nematostella vectensis]
          Length = 406

 Score = 50.2 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 29/81 (35%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F+  +++DV G+T G GF G   R     L          R     G        F   
Sbjct: 211 VFSPDEMIDVIGVTKGHGFKGVTYRWGTKKLP--RKTHKGLRKVACIGAWHPARVSFS-V 267

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 268 ARAGQAGYHHRTELNKKIYRI 288


>gi|226475912|emb|CAX72046.1| ribosomal protein L3 [Schistosoma japonicum]
          Length = 341

 Score = 50.2 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F+  +++DV G+T GKGF G   R +   L          R     G    P RV ++
Sbjct: 131 NVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVARS 187

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G    T  N ++  +
Sbjct: 188 VTRAGQKGYFHRTELNKKIYRI 209


>gi|78190599|gb|ABB29621.1| ribosomal protein 3 large subunit [Priapulus caudatus]
          Length = 319

 Score = 50.2 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++D+ G+T G GF G   R +   L          R     G    P RV   
Sbjct: 154 SVFAADEMIDMVGVTKGHGFKGVTSRWHCKKLP--RKTHKGLRKVACIGAW-HPSRVQFT 210

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N +V  +
Sbjct: 211 VARAGQKGYHHRTEINKKVYRI 232


>gi|226480246|emb|CAX78787.1| ribosomal protein L3 [Schistosoma japonicum]
 gi|226480248|emb|CAX78788.1| ribosomal protein L3 [Schistosoma japonicum]
          Length = 328

 Score = 50.2 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F+  +++DV G+T GKGF G   R +   L          R     G    P RV ++
Sbjct: 118 NVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVARS 174

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G    T  N ++  +
Sbjct: 175 VARAGQKGYFHRTELNKKIYRI 196


>gi|70909599|emb|CAJ17225.1| ribosomal protein L3e [Mycetophagus quadripustulatus]
          Length = 283

 Score = 50.2 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++D  G+T GKG+ G   R +   L          R     G    P RV    
Sbjct: 86  VFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFTV 142

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 143 ARAGQKGYHHRTEMNKKIYRI 163


>gi|71032875|ref|XP_766079.1| 60S ribosomal protein L3 [Theileria parva strain Muguga]
 gi|68353036|gb|EAN33796.1| 60S ribosomal protein L3, putative [Theileria parva]
          Length = 384

 Score = 50.2 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 48/139 (34%), Gaps = 34/139 (24%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T G G  G + R+    L          R     G    P RV    
Sbjct: 206 VFGENEMLDVLGVTKGHGVKGVVSRYGVTRLP--RKTHRGLRKVACIGSW-HPARVQFQV 262

Query: 162 KMAGRMGGNRVTVKNLEVVSVD------------------------------DKRGLILV 191
              G+ G ++ T +N ++  +                                +   +++
Sbjct: 263 PRHGQKGYHKRTERNKKIYRLGLGSSARNGSTDSDLTEKTITPMGGFPHYGVVREDFLML 322

Query: 192 KGCVPGAKKNSWILVRDSF 210
           KGC+PG +K   I +R + 
Sbjct: 323 KGCIPGTRKR-VITLRKTL 340


>gi|226480230|emb|CAX78779.1| ribosomal protein L3 [Schistosoma japonicum]
          Length = 329

 Score = 49.8 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F+  +++DV G+T GKGF G   R +   L          R     G    P RV ++
Sbjct: 119 NVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVARS 175

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G    T  N ++  +
Sbjct: 176 VARAGQKGYFHRTELNKKIYRI 197


>gi|71984550|ref|NP_001021256.1| Ribosomal Protein, Large subunit family member (rpl-3)
           [Caenorhabditis elegans]
 gi|50507482|emb|CAH04728.1| C. elegans protein F13B10.2d, confirmed by transcript evidence
           [Caenorhabditis elegans]
 gi|51011805|emb|CAH10798.1| C. elegans protein F13B10.2d, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 303

 Score = 49.8 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++D  G+T G GF G   R +   L          R     G    P RV    
Sbjct: 112 VFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVAFTV 168

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T+ N ++  +
Sbjct: 169 ARAGQKGFHHRTIINNKIYRI 189


>gi|307169360|gb|EFN62081.1| 60S ribosomal protein L3 [Camponotus floridanus]
          Length = 402

 Score = 49.8 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++DV G+T GKG+ G   R +   L          R     G    P RV   
Sbjct: 196 NVFASDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFT 252

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 253 VARAGQKGYHHRTEMNKKIYRI 274


>gi|298705189|emb|CBJ28620.1| Ribosomal protein L3 [Ectocarpus siliculosus]
          Length = 423

 Score = 49.8 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 38/139 (27%), Gaps = 34/139 (24%)

Query: 96  SVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP 154
                   F   + +DV G + G G  G + R     L          R     G     
Sbjct: 234 QKVPVDAVFAKDECIDVLGASKGHGTEGVVTRWGVTRLP--RKTHRGLRKVACIGAWHPA 291

Query: 155 GRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL-------------------------- 188
              F     AG+ G +  T  N ++  +  K  +                          
Sbjct: 292 RVSFS-VARAGQHGYHHRTELNKKIYRIGKKGDVASASTEADLTVKHITPLGGFPHYGEI 350

Query: 189 ----ILVKGCVPGAKKNSW 203
               +++KGCV G KK   
Sbjct: 351 NEDWLMLKGCVIGCKKRCI 369


>gi|225718854|gb|ACO15273.1| 60S ribosomal protein L3 [Caligus clemensi]
          Length = 410

 Score = 49.8 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F+  +++D  G+T GKGF G   R +   L          R     G    P R+   
Sbjct: 209 SVFSKDEMIDTIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRIQYT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEINKKIYDI 287


>gi|324528901|gb|ADY48966.1| 60S ribosomal protein L3 [Ascaris suum]
          Length = 222

 Score = 49.8 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 3/81 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++D  G+T GKGF G   R +   L          R     G    P RV   
Sbjct: 29  SVFAQDEMIDCIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFT 85

Query: 161 KKMAGRMGGNRVTVKNLEVVS 181
              AG+ G +  T  N ++  
Sbjct: 86  VARAGQKGYHHRTEVNKKIYR 106


>gi|118484565|gb|ABK94156.1| unknown [Populus trichocarpa]
          Length = 389

 Score = 49.8 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 41/131 (31%), Gaps = 6/131 (4%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + +     K  +     + V+      +  V                 F   +++D
Sbjct: 163 LAHTQIRKMKGLKQKKAHLMEIQVNGGDVAKK--VDFAYSFFEKQIPIDA-IFQKDEMID 219

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
           + G+T GKG+ G + R     L          R     G    P RV      AG+ G +
Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYH 276

Query: 171 RVTVKNLEVVS 181
             T  + ++  
Sbjct: 277 HRTELSKKIYK 287


>gi|168026163|ref|XP_001765602.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683240|gb|EDQ69652.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 392

 Score = 49.8 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 46/139 (33%), Gaps = 8/139 (5%)

Query: 46  YMAVQ--VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
           Y +V   +   + +     K  +   + + V+      +  V     L           F
Sbjct: 156 YASVIRVLAHTQVRKLKGIKQKKAHLAEIQVNGGNIAEK--VDFGFKLFEKWVSVDA-VF 212

Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
              +++D+ G+T G G+ G + R     L          R     G    P RV      
Sbjct: 213 RKDEMIDIIGVTRGHGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVAR 269

Query: 164 AGRMGGNRVTVKNLEVVSV 182
           AG+ G +  T  N +V  V
Sbjct: 270 AGQNGYHHRTEMNKKVYKV 288


>gi|196000674|ref|XP_002110205.1| expressed hypothetical protein [Trichoplax adhaerens]
 gi|190588329|gb|EDV28371.1| expressed hypothetical protein [Trichoplax adhaerens]
          Length = 399

 Score = 49.8 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 48/138 (34%), Gaps = 34/138 (24%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F+  +++D+ G T GKGF G   R     L          R     G    P RV  + 
Sbjct: 216 VFSQDEMIDIIGATKGKGFRGVTFRWGTKKLP--RKTHKGLRKVACIGSW-HPSRVGFSI 272

Query: 162 KMAGRMGGNRVTVKNLEVVSVDD---KRG---------------------------LILV 191
             AG+ G +  T  N ++  +     ++                             I++
Sbjct: 273 ARAGQTGYHHRTEVNKKIYRIGSGKDEKNASTGYDTTVKKITPVGGFPHYGVVTQDYIML 332

Query: 192 KGCVPGAKKNSWILVRDS 209
           KGCV G KK   I +R S
Sbjct: 333 KGCVMGPKKR-VITLRKS 349


>gi|256079531|ref|XP_002576040.1| 60S ribosomal protein L3 [Schistosoma mansoni]
 gi|238661298|emb|CAZ32275.1| 60S ribosomal protein L3, putative [Schistosoma mansoni]
          Length = 419

 Score = 49.4 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 4/87 (4%)

Query: 97  VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
             S S  F+  +++DV G+T GKGF G   R +   L          R     G    P 
Sbjct: 204 QISVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPA 260

Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           RV ++   AG+ G    T  N ++  +
Sbjct: 261 RVARSVARAGQKGYFHRTELNKKIYKI 287


>gi|82596814|ref|XP_726417.1| ribosomal protein L3 [Plasmodium yoelii yoelii str. 17XNL]
 gi|23481819|gb|EAA17982.1| ribosomal protein L3, putative [Plasmodium yoelii yoelii]
          Length = 386

 Score = 49.4 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 3/86 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++DV  +T G G  G + R+    L          R     G    P RV   
Sbjct: 204 NVFNTNEMIDVISVTKGHGTKGVVSRYGVKRLP--RKTHRGLRKVACIGAW-HPARVQFQ 260

Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKR 186
               G+ G    T +N ++  +  K+
Sbjct: 261 VPRHGQKGYFHRTERNKKIYRIGLKK 286


>gi|324517742|gb|ADY46908.1| 60S ribosomal protein L3 [Ascaris suum]
          Length = 402

 Score = 49.4 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 3/81 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++D  G+T GKGF G   R +   L          R     G    P RV   
Sbjct: 209 SVFAQDEMIDCIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVS 181
              AG+ G +  T  N ++  
Sbjct: 266 VARAGQKGYHHRTEVNKKIYR 286


>gi|315115447|gb|ADT80696.1| ribosomal protein L3 [Euphydryas aurinia]
          Length = 412

 Score = 49.4 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 3/81 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++D  G+T GKG+ G   R +   L          R     G    P RV   
Sbjct: 209 SVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVS 181
              AG+ G +  T  N ++  
Sbjct: 266 VARAGQKGYHHRTEMNKKIYR 286


>gi|321263851|ref|XP_003196643.1| large subunit ribosomal protein L3 [Cryptococcus gattii WM276]
 gi|317463120|gb|ADV24856.1| Large subunit ribosomal protein L3, putative [Cryptococcus gattii
           WM276]
          Length = 390

 Score = 49.4 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 34/100 (34%), Gaps = 8/100 (8%)

Query: 83  FRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISH 142
           F     +  + VG     S F   + +D+ G+T G G+ G   R     L          
Sbjct: 195 FARSHFEKTVEVG-----SVFEQDECIDIIGVTKGHGYEGVTARWGTTRLP--RKTHRGL 247

Query: 143 RSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           R     G       +F     AG+ G +  T  N ++  +
Sbjct: 248 RKVACIGAWHPSNVMFS-VARAGQRGYHSRTSMNHKIYRI 286


>gi|1350745|sp|P49149|RL3_TOXCA RecName: Full=60S ribosomal protein L3
 gi|596082|gb|AAA92285.1| ribosomal protein L3 [Toxocara canis]
          Length = 402

 Score = 49.4 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 3/81 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++D  G+T GKGF G   R +   L          R     G    P RV   
Sbjct: 209 SVFAQDEMIDCIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVS 181
              AG+ G +  T  N ++  
Sbjct: 266 VARAGQKGYHHRTEVNKKIYR 286


>gi|221054097|ref|XP_002261796.1| ribosomal protein L3 [Plasmodium knowlesi strain H]
 gi|193808256|emb|CAQ38959.1| ribosomal protein L3, putative [Plasmodium knowlesi strain H]
          Length = 386

 Score = 49.4 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 3/86 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++DV  +T G G  G + R+    L          R     G    P RV   
Sbjct: 204 NVFNTNEMIDVISVTKGHGTKGVVSRYGVKRLP--RKTHRGLRKVACIGAW-HPARVQFQ 260

Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKR 186
               G+ G    T +N ++  +  K+
Sbjct: 261 VPRHGQKGYFHRTERNKKIYRIGLKK 286


>gi|168040500|ref|XP_001772732.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|168040502|ref|XP_001772733.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162675957|gb|EDQ62446.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162675958|gb|EDQ62447.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 392

 Score = 49.4 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 48/147 (32%), Gaps = 36/147 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++D+ G+T G G+ G + R     L          R     G    P RV   
Sbjct: 210 SVFRKDEMIDIIGVTRGHGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFT 266

Query: 161 KKMAGRMGGNRVTVKNLEVVSV--------------------------------DDKRGL 188
              AG+ G +  T  N +V  V                                  +   
Sbjct: 267 VARAGQNGYHHRTEMNKKVYKVGKVADKQSFSASTEFDVTEKEITPMGGFAHYGIVREDY 326

Query: 189 ILVKGCVPGAKKNSWILVRDSFKSAVN 215
           +++KG V G KK   I +R S    V+
Sbjct: 327 LMIKGGVMGPKKR-VITLRQSLYKQVS 352


>gi|156081997|ref|XP_001608491.1| ribosomal protein L3 [Plasmodium vivax SaI-1]
 gi|148801062|gb|EDL42467.1| ribosomal protein L3, putative [Plasmodium vivax]
          Length = 386

 Score = 49.4 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 3/86 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++DV  +T G G  G + R+    L          R     G    P RV   
Sbjct: 204 NVFNTNEMIDVISVTKGHGTKGVVSRYGVKRLP--RKTHRGLRKVACIGAW-HPARVQFQ 260

Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKR 186
               G+ G    T +N ++  +  K+
Sbjct: 261 VPRHGQKGYFHRTERNKKIYRIGLKK 286


>gi|226480232|emb|CAX78780.1| ribosomal protein L3 [Schistosoma japonicum]
          Length = 252

 Score = 49.4 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F+  +++DV G+T GKGF G   R +   L          R     G    P RV ++
Sbjct: 42  NVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVARS 98

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G    T  N ++  +
Sbjct: 99  VARAGQKGYFHRTELNKKIYRI 120


>gi|213403598|ref|XP_002172571.1| 60S ribosomal protein L3-A [Schizosaccharomyces japonicus yFS275]
 gi|213406091|ref|XP_002173817.1| 60S ribosomal protein L3-A [Schizosaccharomyces japonicus yFS275]
 gi|212000618|gb|EEB06278.1| 60S ribosomal protein L3-A [Schizosaccharomyces japonicus yFS275]
 gi|212001864|gb|EEB07524.1| 60S ribosomal protein L3-A [Schizosaccharomyces japonicus yFS275]
          Length = 388

 Score = 49.4 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 36/130 (27%), Gaps = 33/130 (25%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   ++VDV G+T GKG  G   R     L          R     G    P  V   
Sbjct: 207 SVFEQNEIVDVIGITKGKGVEGVTTRWGTKRLP--RKTHRGLRKVACIGAW-HPSNVGWT 263

Query: 161 KKMAGRMGGNRVTVKNLEVVSVD------------------------------DKRGLIL 190
              AG  G    T  N ++  +                                +   ++
Sbjct: 264 VARAGNNGYMHRTQLNSKIYRIGSGDDAKNGATDFDATEKRITPMGGFVRYGSVENDYVM 323

Query: 191 VKGCVPGAKK 200
           + G  PG  K
Sbjct: 324 LNGATPGPVK 333


>gi|158291770|ref|XP_313303.4| AGAP003556-PA [Anopheles gambiae str. PEST]
 gi|157017447|gb|EAA08849.4| AGAP003556-PA [Anopheles gambiae str. PEST]
          Length = 417

 Score = 49.4 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 3/80 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F+  +++D   +T GKGF G   R +   L          R     G    P RV    
Sbjct: 210 VFSQDEMIDCVAVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVAFTV 266

Query: 162 KMAGRMGGNRVTVKNLEVVS 181
             AG+ G +  T  N ++  
Sbjct: 267 ARAGQKGYHHRTELNKKIYR 286


>gi|148232513|ref|NP_001087574.1| MGC84749 protein [Xenopus laevis]
 gi|51261715|gb|AAH80121.1| MGC84749 protein [Xenopus laevis]
          Length = 420

 Score = 49.0 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++DV G+T GKGF G   R +   L          R     G    P RV   
Sbjct: 209 NVFAQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGSW-HPARVGST 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G    T  N ++  +
Sbjct: 266 VARAGQKGYFHRTELNKKIYRI 287


>gi|58260576|ref|XP_567698.1| large subunit ribosomal protein L3 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134117057|ref|XP_772755.1| hypothetical protein CNBK1290 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255373|gb|EAL18108.1| hypothetical protein CNBK1290 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229779|gb|AAW46181.1| large subunit ribosomal protein L3, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 390

 Score = 49.0 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 29/82 (35%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   + +D+ G+T G G+ G   R     L          R     G       +F  
Sbjct: 208 SVFEQDECIDIIGVTKGHGYEGVTARWGTTRLP--RKTHRGLRKVACIGAWHPSNVMFS- 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 265 VARAGQRGYHSRTSMNHKIYRI 286


>gi|149585070|ref|XP_001514408.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 506

 Score = 49.0 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 3/88 (3%)

Query: 95  GSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP 154
             V   + F   +++DV G+T GKG+ G   R +   L          R     G    P
Sbjct: 306 QQVPVATVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HP 362

Query: 155 GRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            RV  +   AG+ G +  T  N ++  +
Sbjct: 363 ARVAFSVARAGQKGYHHRTEINKKIYKI 390


>gi|188529359|gb|ACD62425.1| ribosomal protein L3 [Drosophila silvestris]
          Length = 207

 Score = 49.0 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   ++VD  G+T GKGF G   R +   L          R     G    P RV   
Sbjct: 41  NVFGQDEMVDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVXCIGAW-HPSRVSTT 97

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 98  VARAGQKGYHHRTEINKKIYRI 119


>gi|56462226|gb|AAV91396.1| ribosomal protein 24 [Lonomia obliqua]
          Length = 280

 Score = 48.6 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 3/80 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++D  G+T GKG+ G   R +   L          R     G    P RV    
Sbjct: 77  VFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFTV 133

Query: 162 KMAGRMGGNRVTVKNLEVVS 181
             AG+ G +  T  N ++  
Sbjct: 134 ARAGQKGYHHRTEMNKKIYR 153


>gi|73973636|ref|XP_868306.1| PREDICTED: similar to 60S ribosomal protein L3 (L4) isoform 8
           [Canis familiaris]
          Length = 390

 Score = 48.6 bits (115), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 8/106 (7%)

Query: 77  KKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATH 136
           K  L E +V      +PV  VF        +++DV G+T GKG+ G   R +   L    
Sbjct: 177 KAHLMEIQVNGGTQQVPVNQVFGQD-----EMIDVIGVTKGKGYKGVTSRWHTKKLP--R 229

Query: 137 GVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
                 R     G    P RV  +   AG+ G +  T  N ++  +
Sbjct: 230 KTHRGLRKVACIGAW-HPARVAFSMARAGQKGYHHRTEINKKIYKI 274


>gi|313227808|emb|CBY22957.1| unnamed protein product [Oikopleura dioica]
          Length = 403

 Score = 48.6 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F+  +++DV G+T G+G+ G   R +   L          R     G    P RV  + 
Sbjct: 211 VFSEAEMIDVIGITKGRGYHGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVAFSV 267

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             +G+ G +  T  N +V  V
Sbjct: 268 ARSGQKGYHHRTEINKKVYRV 288


>gi|318087096|gb|ADV40140.1| putative ribosomal protein L3 isoform A [Latrodectus hesperus]
          Length = 303

 Score = 48.6 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKGF G   R +   L          R     G    P RV    
Sbjct: 210 VFAQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFTV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYRI 287


>gi|225711234|gb|ACO11463.1| 60S ribosomal protein L3 [Caligus rogercresseyi]
          Length = 408

 Score = 48.6 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S FT  +++D  G+T GKGF G   R +   L          R     G    P R+   
Sbjct: 209 SVFTKDEMIDTIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRIQFT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEINKKIYDI 287


>gi|156082902|ref|XP_001608935.1| ribosomal protein L3 [Babesia bovis T2Bo]
 gi|154796185|gb|EDO05367.1| ribosomal protein L3, putative [Babesia bovis]
          Length = 393

 Score = 48.6 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 45/135 (33%), Gaps = 33/135 (24%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   ++VDV G+T G G  G + R     L          R     G    P RV   
Sbjct: 205 AVFASNEMVDVLGVTKGHGMKGVISRFGVTRLP--RKTHRGLRKVACIGSW-HPARVQFQ 261

Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
              +G+ G    T +N ++  +                              + K   ++
Sbjct: 262 VPRSGQKGYFHRTERNKKIYRLGLGSNPRNASTDADLTEKQITPMGGFPHYGEVKDDFLM 321

Query: 191 VKGCVPGAKKNSWIL 205
           +KGC+ G KK   ++
Sbjct: 322 IKGCIVGTKKRPIVI 336


>gi|78190703|gb|ABB29673.1| ribosomal protein 3 large subunit [Leucosolenia sp. AR-2003]
          Length = 319

 Score = 48.2 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKGF G   R +   L          R     G    P RV  + 
Sbjct: 155 VFGQDEMIDVIGVTRGKGFKGVTSRWHCKKLP--RKTHKGLRKVACIGAW-HPSRVQYSV 211

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N +V  V
Sbjct: 212 ARAGQKGYHHRTEVNKKVYRV 232


>gi|62083393|gb|AAX62421.1| ribosomal protein L3 [Lysiphlebus testaceipes]
 gi|62083395|gb|AAX62422.1| ribosomal protein L3 variant 1 [Lysiphlebus testaceipes]
          Length = 412

 Score = 48.2 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++DV G+T GKG  G   R +   L          R     G    P RV   
Sbjct: 209 NVFAQDEMIDVIGVTKGKGTKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEMNKKIYRI 287


>gi|114686508|ref|XP_525601.2| PREDICTED: similar to ribosomal protein L3 [Pan troglodytes]
          Length = 474

 Score = 48.2 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 281 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 337

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 338 ARAGQKGYHHRTEINKKIYKI 358


>gi|309268181|ref|XP_001475783.2| PREDICTED: 60S ribosomal protein L3-like [Mus musculus]
          Length = 403

 Score = 48.2 bits (114), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHYRTEINKKIYKI 287


>gi|297716820|ref|XP_002834695.1| PREDICTED: 60S ribosomal protein L3-like [Pongo abelii]
          Length = 332

 Score = 48.2 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 217 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 273

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 274 ARAGQKGYHHRTEINKKIYKI 294


>gi|311334502|emb|CBN08632.1| small nucleolar RNA, C/D box 43 [Microcosmus squamiger]
          Length = 404

 Score = 48.2 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 3/83 (3%)

Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
              F   +++D+ G+T G G+ G   R +   L          R     G    P RV  
Sbjct: 208 ADLFGQDEMIDIIGVTKGHGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVAF 264

Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182
           +   +G+ G +  T  N ++  V
Sbjct: 265 SVARSGQKGYHHRTEINKKIYRV 287


>gi|84998982|ref|XP_954212.1| 60S ribosomal protein l3 [Theileria annulata]
 gi|65305210|emb|CAI73535.1| 60S ribosomal protein l3, putative [Theileria annulata]
          Length = 173

 Score = 48.2 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 46/132 (34%), Gaps = 34/132 (25%)

Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
           +DV G+T G G  G + R+    L          R     G    P RV       G+ G
Sbjct: 2   LDVLGVTKGHGVKGVVSRYGVTRLP--RKTHRGLRKVACIGSW-HPARVQFQVPRHGQKG 58

Query: 169 GNRVTVKNLEVVSV---DDKRG---------------------------LILVKGCVPGA 198
            ++ T +N ++  +   +  R                             +++KGC+PG 
Sbjct: 59  YHKRTERNKKIYRIGLGNCNRNGSTDSDLTEKTITPMGGFPHYGVVREDFLMLKGCIPGT 118

Query: 199 KKNSWILVRDSF 210
           KK   I +R + 
Sbjct: 119 KKR-VITLRKTL 129


>gi|61740425|gb|AAX54475.1| ribosomal protein L3 [Lolium multiflorum]
          Length = 132

 Score = 48.2 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 32/98 (32%), Gaps = 4/98 (4%)

Query: 85  VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRS 144
           V    +            F   +++D+ G+T GKG+     R     L          R 
Sbjct: 19  VDYGYNFFEKEVPIDA-VFQKDEMIDIIGVTKGKGYRRCRTRWGVTRLP--RKTHRGLRK 75

Query: 145 HGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
               G    P RV      AG+ G +  T  N +V  +
Sbjct: 76  VACIGAW-HPARVSYTVARAGQNGYHHRTEMNKKVYKI 112


>gi|114682524|ref|XP_001150138.1| PREDICTED: similar to ribosomal protein L3 [Pan troglodytes]
          Length = 458

 Score = 48.2 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 273 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 329

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 330 ARAGQKGYHHRTEINKKIYKI 350


>gi|73973638|ref|XP_868310.1| PREDICTED: similar to 60S ribosomal protein L3 (L4) isoform 9
           [Canis familiaris]
          Length = 331

 Score = 47.8 bits (113), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSM 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287


>gi|224095133|ref|XP_002198398.1| PREDICTED: similar to ribosomal protein L3 [Taeniopygia guttata]
          Length = 403

 Score = 47.8 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 3/88 (3%)

Query: 95  GSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP 154
             V   + F   +++DV G+T GKG+ G   R +   L          R     G    P
Sbjct: 203 QQVPVATVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HP 259

Query: 155 GRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            RV  +   AG+ G +  T  N ++  +
Sbjct: 260 ARVAFSVARAGQKGYHHRTEINKKIYKI 287


>gi|47218047|emb|CAG11452.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 388

 Score = 47.8 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 44/137 (32%), Gaps = 25/137 (18%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++D+ G++ G GF G   R +   L          R     G    P RV   
Sbjct: 208 AVFCQDEMIDIIGVSKGHGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGYT 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSV--------------------DDKRGLILVKGCVP--GA 198
              AG+ G +  T  N ++  +                    D  +  I   G  P  G 
Sbjct: 265 IARAGQKGYHHRTEINKKIFRIGKGVHIQDGKVIRNNASTSYDTSQKTITPMGGFPHYGE 324

Query: 199 KKNSWILVRDSFKSAVN 215
             N +++V+        
Sbjct: 325 VNNDFVMVKGCVVGPKK 341


>gi|213515418|ref|NP_001133147.1| ribosomal protein L3-like [Salmo salar]
 gi|197632147|gb|ACH70797.1| ribosomal protein L3-like [Salmo salar]
          Length = 409

 Score = 47.8 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 49/156 (31%), Gaps = 41/156 (26%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV G+T G G  G   R     L          R     G    P RV   
Sbjct: 209 SVFYQDEMIDVIGVTKGHGMKGVTSRWGVKKLP--RKTHKGLRKVACIGAW-HPSRVGYT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV-------------------------------------D 183
              AG+ G +  T  N ++  +                                     D
Sbjct: 266 IARAGQKGYHHRTELNKKIYRIGKGIHVQDGKVIKNNASTNYDTTQKTITPMGGFPHYGD 325

Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
            K   +++KGCV G +K   + +R S     + K K
Sbjct: 326 VKNDFLMLKGCVIGCRKR-VLTLRKSMLVHTSRKSK 360


>gi|19115692|ref|NP_594780.1| 60S ribosomal protein L3 [Schizosaccharomyces pombe 972h-]
 gi|548771|sp|P36584|RL3B_SCHPO RecName: Full=60S ribosomal protein L3-B
 gi|5059|emb|CAA40901.1| ribosomal protein L3 [Schizosaccharomyces pombe]
 gi|13810236|emb|CAC37425.1| 60S ribosomal protein L3 [Schizosaccharomyces pombe]
          Length = 388

 Score = 47.8 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 36/137 (26%), Gaps = 36/137 (26%)

Query: 97  VFSPSY---FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
             +      F   +++DV G+T GKG  G   R     L          R     G    
Sbjct: 200 EKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKRLP--RKTHRGLRKVACIGAW-H 256

Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD----------------------------- 184
           P  V      AG  G    T  N ++  +                               
Sbjct: 257 PANVQWTVARAGNAGYMHRTQLNSKIYRIGAGDDAKNASTDFDATEKRITPMGGFVRYGV 316

Query: 185 -KRGLILVKGCVPGAKK 200
            +   +++ G  PG  K
Sbjct: 317 VENDFVMLNGATPGPVK 333


>gi|148235098|ref|NP_001091345.1| hypothetical protein LOC100037184 [Xenopus laevis]
 gi|125858902|gb|AAI29593.1| LOC100037184 protein [Xenopus laevis]
          Length = 405

 Score = 47.8 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 29/82 (35%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   + VD+  +T GKGF G   R     L+         R     G        F  
Sbjct: 214 SVFGQNENVDIIAVTKGKGFEGVTFRWGVKKLQ--RKTHRGLRKVACIGAWHPARVGFT- 270

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 271 VPRAGQNGYHHRTELNKKIYRI 292


>gi|19114383|ref|NP_593471.1| 60S ribosomal protein L3 [Schizosaccharomyces pombe 972h-]
 gi|730556|sp|P40372|RL3A_SCHPO RecName: Full=60S ribosomal protein L3-A
 gi|508856|gb|AAA19655.1| ribosomal protein L3 [Schizosaccharomyces pombe]
 gi|2370475|emb|CAB11503.1| 60S ribosomal protein L3 [Schizosaccharomyces pombe]
          Length = 388

 Score = 47.8 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 36/137 (26%), Gaps = 36/137 (26%)

Query: 97  VFSPSY---FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
             +      F   +++DV G+T GKG  G   R     L          R     G    
Sbjct: 200 EKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKRLP--RKTHRGLRKVACIGAW-H 256

Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD----------------------------- 184
           P  V      AG  G    T  N ++  +                               
Sbjct: 257 PANVQWTVARAGNAGYMHRTQLNSKIYRIGAGDDAKNASTDFDATEKRITPMGGFVRYGV 316

Query: 185 -KRGLILVKGCVPGAKK 200
            +   +++ G  PG  K
Sbjct: 317 VENDFVMLNGATPGPVK 333


>gi|290991133|ref|XP_002678190.1| ribosomal protein L3 [Naegleria gruberi]
 gi|284091801|gb|EFC45446.1| ribosomal protein L3 [Naegleria gruberi]
          Length = 416

 Score = 47.8 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 27/82 (32%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   + +DV  ++ GKG  G + R     L          R     G        F  
Sbjct: 210 SVFAKDEPIDVIAVSKGKGTKGVVSRWGVRRLP--RKTHRGLRKVACIGAWHPARVSFS- 266

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G      +N ++  +
Sbjct: 267 VARAGQKGFFHRVHQNKKIYRI 288


>gi|114610091|ref|XP_001143080.1| PREDICTED: hypothetical protein [Pan troglodytes]
          Length = 462

 Score = 47.8 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 269 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKNLP--RKTHQGLRKVACIGAW-HPARVAFSV 325

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 326 ARAGQKGYHHRTEINKKIYKI 346


>gi|221116204|ref|XP_002167181.1| PREDICTED: similar to Ribosomal protein L3 CG4863-PA [Hydra
           magnipapillata]
 gi|221117552|ref|XP_002159678.1| PREDICTED: similar to ribosomal protein L3e [Hydra magnipapillata]
          Length = 403

 Score = 47.5 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 46/156 (29%), Gaps = 41/156 (26%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++D  G+T G GF G   R     L          R     G        F  
Sbjct: 209 NVFGQDEMIDAIGITKGHGFKGVTYRWGTKKLP--RKTHKGLRKVACVGAWHPARIGFT- 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSVD----------DKRG----------------------- 187
              AG+ G +    +N ++  +            K                         
Sbjct: 266 VPRAGQCGYHHRVERNKKIYRIGRGIHTKDNKVVKNNASTDYDLTEKTITPMGGFPHYGE 325

Query: 188 ----LILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
                +++KG +PG KK   I +R S  +  + K  
Sbjct: 326 VTEDFLMLKGAIPGPKKR-VISLRKSLLAQTSRKAN 360


>gi|126339540|ref|XP_001366844.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 476

 Score = 47.5 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 283 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 339

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 340 ARAGQKGYHHRTEINKKIYKI 360


>gi|225706512|gb|ACO09102.1| 60S ribosomal protein L3 [Osmerus mordax]
          Length = 403

 Score = 47.5 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 3/83 (3%)

Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
            + FT  +++DV G+T G G+ G   R +   L          R     G    P RV  
Sbjct: 208 ANVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAF 264

Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182
           +   AG+ G +  T  N ++  +
Sbjct: 265 SVARAGQKGYHHRTEINKKIYKI 287


>gi|326911917|ref|XP_003202302.1| PREDICTED: 60S ribosomal protein L3-like [Meleagris gallopavo]
          Length = 403

 Score = 47.5 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV G+T GKG+ G   R +   L          R     G    P RV  +
Sbjct: 209 SVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFS 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEINKKIYKI 287


>gi|57525400|ref|NP_001006241.1| 60S ribosomal protein L3 [Gallus gallus]
 gi|53132964|emb|CAG31951.1| hypothetical protein RCJMB04_14e22 [Gallus gallus]
          Length = 403

 Score = 47.5 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV G+T GKG+ G   R +   L          R     G    P RV  +
Sbjct: 209 SVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFS 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEINKKIYKI 287


>gi|148228673|ref|NP_001080341.1| ribosomal protein L3 [Xenopus laevis]
 gi|27769202|gb|AAH42242.1| Rpl3-prov protein [Xenopus laevis]
          Length = 403

 Score = 47.5 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 3/88 (3%)

Query: 95  GSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP 154
             V     F   +++DV G+T GKG+ G   R +   L          R     G    P
Sbjct: 203 QQVVIGGVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HP 259

Query: 155 GRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
            RV  +   AG+ G +  T  N ++  +
Sbjct: 260 ARVAFSVARAGQKGYHHRTEINKKIYKI 287


>gi|57094678|ref|XP_532246.1| PREDICTED: similar to 60S ribosomal protein L3 (L4) isoform 1
           [Canis familiaris]
          Length = 403

 Score = 47.5 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSM 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287


>gi|119580719|gb|EAW60315.1| ribosomal protein L3, isoform CRA_f [Homo sapiens]
          Length = 430

 Score = 47.5 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 237 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 293

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 294 ARAGQKGYHHRTEINKKIYKI 314


>gi|73973634|ref|XP_868301.1| PREDICTED: similar to 60S ribosomal protein L3 (L4) isoform 7
           [Canis familiaris]
          Length = 305

 Score = 47.5 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 112 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSM 168

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 169 ARAGQKGYHHRTEINKKIYKI 189


>gi|119580717|gb|EAW60313.1| ribosomal protein L3, isoform CRA_d [Homo sapiens]
          Length = 429

 Score = 47.5 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 236 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 292

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 293 ARAGQKGYHHRTEINKKIYKI 313


>gi|118120333|ref|XP_001234708.1| PREDICTED: hypothetical protein, partial [Gallus gallus]
          Length = 236

 Score = 47.1 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV G+T GKG+ G   R +   L          R     G    P RV  +
Sbjct: 42  SVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFS 98

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 99  VARAGQKGYHHRTEINKKIYKI 120


>gi|73973628|ref|XP_868292.1| PREDICTED: similar to 60S ribosomal protein L3 (L4) isoform 4
           [Canis familiaris]
          Length = 302

 Score = 47.1 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 109 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSM 165

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 166 ARAGQKGYHHRTEINKKIYKI 186


>gi|294954638|ref|XP_002788244.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
 gi|239903507|gb|EER20040.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
          Length = 385

 Score = 47.1 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   ++VD+ G+T G G +    R     L          R     G    P RV   
Sbjct: 201 SVFDKDEMVDIIGVTKGHGNTSVTTRWGVTRL--ARKTHRGLRKVACIGAW-HPARVQFQ 257

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+MG +     N ++  +
Sbjct: 258 VPRAGQMGYHHRVEINKKIYRI 279


>gi|294867277|ref|XP_002765039.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
 gi|239864919|gb|EEQ97756.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
          Length = 385

 Score = 47.1 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   ++VD+ G+T G G +    R     L          R     G    P RV   
Sbjct: 201 SVFDKDEMVDIIGVTKGHGNTSVTTRWGVTRL--ARKTHRGLRKVACIGAW-HPARVQFQ 257

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+MG +     N ++  +
Sbjct: 258 VPRAGQMGYHHRVEINKKIYRI 279


>gi|198138918|gb|ACH81777.1| ribosomal protein L3 [Artemia franciscana]
          Length = 194

 Score = 47.1 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 29/76 (38%), Gaps = 3/76 (3%)

Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166
           + +DV G T GKG+ G   R +   L          R     G    P RV      AG+
Sbjct: 2   ENIDVIGTTKGKGYKGVTSRWHTRKLP--RKTHKGLRKVACIGAW-HPSRVKFTVARAGQ 58

Query: 167 MGGNRVTVKNLEVVSV 182
            G +  T  N ++  +
Sbjct: 59  KGYHHRTEMNKKIYRI 74


>gi|13517923|gb|AAK29057.1|AF346004_1 L3 ribosomal protein [Lolium perenne]
          Length = 220

 Score = 47.1 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 36/101 (35%), Gaps = 10/101 (9%)

Query: 85  VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHR- 143
           V    +            F   +++D+ G+T GKG+ G + R     L        +HR 
Sbjct: 26  VDYGYNFFEKEVPIDA-VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR-----KTHRG 79

Query: 144 --SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
                  G    P RV      AG+ G +  T  N +V  +
Sbjct: 80  LPKVACIGAW-HPARVSYTVARAGQNGYHHRTEMNKKVYKI 119


>gi|326437430|gb|EGD83000.1| 60S ribosomal protein L3 [Salpingoeca sp. ATCC 50818]
          Length = 398

 Score = 47.1 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 37/100 (37%), Gaps = 8/100 (8%)

Query: 83  FRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISH 142
           F     +  +PVG+V     F   + +DV G + G+GF G   R     L          
Sbjct: 196 FAKGLLEQDIPVGTV-----FVQDENIDVLGASKGRGFEGVTHRWGTKRLP--RKTHKGL 248

Query: 143 RSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
           R     G    P  V  +   AG+ G +  T  N ++  V
Sbjct: 249 RKVACIGAW-HPANVQYSVARAGQNGYHHRTEMNKKIYMV 287


>gi|48257062|gb|AAH04323.2| RPL3 protein [Homo sapiens]
          Length = 292

 Score = 47.1 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 99  VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 155

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 156 ARAGQKGYHHRTEINKKIYKI 176


>gi|209732474|gb|ACI67106.1| 60S ribosomal protein L3 [Salmo salar]
          Length = 403

 Score = 47.1 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + FT  +++DV G+T G G+ G   R +   L          R     G    P RV  +
Sbjct: 209 NVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPSRVAFS 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEINKKIYKI 287


>gi|213510850|ref|NP_001135078.1| 60S ribosomal protein L3 [Salmo salar]
 gi|209731890|gb|ACI66814.1| 60S ribosomal protein L3 [Salmo salar]
 gi|209738508|gb|ACI70123.1| 60S ribosomal protein L3 [Salmo salar]
 gi|209738636|gb|ACI70187.1| 60S ribosomal protein L3 [Salmo salar]
 gi|223646872|gb|ACN10194.1| 60S ribosomal protein L3 [Salmo salar]
 gi|223672733|gb|ACN12548.1| 60S ribosomal protein L3 [Salmo salar]
          Length = 403

 Score = 47.1 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + FT  +++DV G+T G G+ G   R +   L          R     G    P RV  +
Sbjct: 209 NVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPSRVAFS 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEINKKIYKI 287


>gi|7159574|emb|CAB76199.1| ribosomal protein L3 [Bos taurus]
          Length = 403

 Score = 47.1 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287


>gi|14250148|gb|AAH08492.1| Ribosomal protein L3 [Homo sapiens]
          Length = 403

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287


>gi|209734892|gb|ACI68315.1| 60S ribosomal protein L3 [Salmo salar]
 gi|209738572|gb|ACI70155.1| 60S ribosomal protein L3 [Salmo salar]
          Length = 403

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + FT  +++DV G+T G G+ G   R +   L          R     G    P RV  +
Sbjct: 209 NVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPSRVAFS 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEINKKIYKI 287


>gi|132956|sp|P27659|RL3_MOUSE RecName: Full=60S ribosomal protein L3; AltName: Full=J1 protein
 gi|52741|emb|CAA68370.1| J1 protein [Mus musculus]
 gi|226725|prf||1604248A J1 protein
          Length = 403

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV    
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFTV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287


>gi|148697895|gb|EDL29842.1| mCG129893 [Mus musculus]
          Length = 358

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 165 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 221

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 222 ARAGQKGYHHRTEINKKIYKI 242


>gi|294917113|ref|XP_002778404.1| ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
 gi|239886795|gb|EER10199.1| ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
          Length = 230

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   ++VD+ G+T G G +    R     L          R     G    P RV   
Sbjct: 46  SVFDKDEMVDIIGVTKGHGNTSVTTRWGVTRL--ARKTHRGLRKVACIGAW-HPARVQFQ 102

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+MG +     N ++  +
Sbjct: 103 VPRAGQMGYHHRVEINKKIYRI 124


>gi|154426164|gb|AAI51556.1| Ribosomal protein L3 [Bos taurus]
          Length = 403

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287


>gi|18606060|gb|AAH22790.1| Unknown (protein for IMAGE:3538792) [Homo sapiens]
          Length = 374

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 181 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 237

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 238 ARAGQKGYHHRTEINKKIYKI 258


>gi|47217938|emb|CAG02221.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 402

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T G G+ G   R +   L          R     G    P RV  + 
Sbjct: 209 VFAQDEMIDVIGVTKGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 265

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 266 ARAGQKGYHHRTEINKKIYKI 286


>gi|291389862|ref|XP_002711434.1| PREDICTED: ribosomal protein L3-like [Oryctolagus cuniculus]
          Length = 403

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287


>gi|60654345|gb|AAX29863.1| ribosomal protein L3 [synthetic construct]
          Length = 404

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287


>gi|337580|gb|AAA60291.1| ribosomal protein L3 [Homo sapiens]
          Length = 398

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 205 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 261

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 262 ARAGQKGYHHRTEINKKIYKI 282


>gi|73969067|ref|XP_859944.1| PREDICTED: similar to 60S ribosomal protein L3 (L4) isoform 8
           [Canis familiaris]
          Length = 320

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 127 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 183

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 184 ARAGQKGYHHRTEINKKIYKI 204


>gi|27807287|ref|NP_777140.1| 60S ribosomal protein L3 [Bos taurus]
 gi|730564|sp|P39872|RL3_BOVIN RecName: Full=60S ribosomal protein L3
 gi|187609300|pdb|2ZKR|BB Chain b, Structure Of A Mammalian Ribosomal 60s Subunit Within An
           80s Complex Obtained By Docking Homology Models Of The
           Rna And Proteins Into An 8.7 A Cryo-Em Map
 gi|450499|emb|CAA82654.1| ribosomal protein L3 [Bos taurus]
 gi|59858389|gb|AAX09029.1| ribosomal protein L3 [Bos taurus]
 gi|74267942|gb|AAI02254.1| Ribosomal protein L3 [Bos taurus]
 gi|296486985|gb|DAA29098.1| 60S ribosomal protein L3 [Bos taurus]
 gi|1092507|prf||2024221A ribosomal protein L3
          Length = 403

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287


>gi|74191638|dbj|BAE30390.1| unnamed protein product [Mus musculus]
 gi|74198856|dbj|BAE30653.1| unnamed protein product [Mus musculus]
          Length = 403

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287


>gi|74186276|dbj|BAE42921.1| unnamed protein product [Mus musculus]
          Length = 403

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287


>gi|296236921|ref|XP_002763538.1| PREDICTED: 60S ribosomal protein L3-like isoform 1 [Callithrix
           jacchus]
          Length = 403

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287


>gi|233957366|gb|ACQ91223.1| ribosomal protein L3 [Penaeus monodon]
          Length = 406

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV G+T GKG  G   R     L          R     G    P RV   
Sbjct: 209 SVFAQDEMIDVIGVTKGKGMKGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPTRVQFT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T +  ++  +
Sbjct: 266 VARAGQKGYHHRTERTKKIYRI 287


>gi|94404874|ref|XP_982298.1| PREDICTED: 60S ribosomal protein L3-like [Mus musculus]
          Length = 385

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 192 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 248

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 249 ARAGQKGYHHRTEINKKIYKI 269


>gi|74181618|dbj|BAE30074.1| unnamed protein product [Mus musculus]
          Length = 403

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287


>gi|38454246|ref|NP_942048.1| 60S ribosomal protein L3 [Rattus norvegicus]
 gi|132958|sp|P21531|RL3_RAT RecName: Full=60S ribosomal protein L3; AltName: Full=L4
 gi|57698|emb|CAA44095.1| ribosomal protein L3 [Rattus rattus]
 gi|37231753|gb|AAH58494.1| Ribosomal protein L3 [Rattus norvegicus]
 gi|149065896|gb|EDM15769.1| ribosomal protein L3, isoform CRA_b [Rattus norvegicus]
          Length = 403

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287


>gi|255308899|ref|NP_038790.2| 60S ribosomal protein L3 [Mus musculus]
 gi|16307136|gb|AAH09655.1| Ribosomal protein L3 [Mus musculus]
 gi|26354122|dbj|BAC40691.1| unnamed protein product [Mus musculus]
 gi|53237049|gb|AAH83134.1| Ribosomal protein L3 [Mus musculus]
 gi|62825867|gb|AAH94059.1| Ribosomal protein L3 [Mus musculus]
 gi|74138821|dbj|BAE27217.1| unnamed protein product [Mus musculus]
 gi|74139413|dbj|BAE40848.1| unnamed protein product [Mus musculus]
 gi|74141867|dbj|BAE41003.1| unnamed protein product [Mus musculus]
 gi|74142025|dbj|BAE41075.1| unnamed protein product [Mus musculus]
 gi|74146286|dbj|BAE28917.1| unnamed protein product [Mus musculus]
 gi|74151280|dbj|BAE38773.1| unnamed protein product [Mus musculus]
 gi|74184852|dbj|BAE39049.1| unnamed protein product [Mus musculus]
 gi|74190533|dbj|BAE25922.1| unnamed protein product [Mus musculus]
 gi|74195956|dbj|BAE30536.1| unnamed protein product [Mus musculus]
 gi|74198689|dbj|BAE39818.1| unnamed protein product [Mus musculus]
 gi|74201222|dbj|BAE26078.1| unnamed protein product [Mus musculus]
 gi|74204394|dbj|BAE39950.1| unnamed protein product [Mus musculus]
 gi|74207543|dbj|BAE40022.1| unnamed protein product [Mus musculus]
 gi|74207577|dbj|BAE40037.1| unnamed protein product [Mus musculus]
 gi|74207702|dbj|BAE40095.1| unnamed protein product [Mus musculus]
 gi|74207706|dbj|BAE40097.1| unnamed protein product [Mus musculus]
 gi|74212023|dbj|BAE40178.1| unnamed protein product [Mus musculus]
 gi|74220011|dbj|BAE40585.1| unnamed protein product [Mus musculus]
 gi|74221090|dbj|BAE42051.1| unnamed protein product [Mus musculus]
 gi|148672669|gb|EDL04616.1| mCG11520, isoform CRA_b [Mus musculus]
 gi|187956900|gb|AAI58040.1| Ribosomal protein L3 [Mus musculus]
          Length = 403

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287


>gi|4506649|ref|NP_000958.1| 60S ribosomal protein L3 isoform a [Homo sapiens]
 gi|302148475|ref|NP_001180483.1| ribosomal protein L3 [Macaca mulatta]
 gi|297708927|ref|XP_002831202.1| PREDICTED: 60S ribosomal protein L3-like [Pongo abelii]
 gi|730565|sp|P39023|RL3_HUMAN RecName: Full=60S ribosomal protein L3; AltName: Full=HIV-1 TAR
           RNA-binding protein B; Short=TARBP-B
 gi|313659|emb|CAA51839.1| ribosomal protein L3 [Homo sapiens]
 gi|3850177|emb|CAA18450.1| ribosomal protein L3 [Homo sapiens]
 gi|12803201|gb|AAH02408.1| Ribosomal protein L3 [Homo sapiens]
 gi|13623709|gb|AAH06483.1| Ribosomal protein L3, isoform a [Homo sapiens]
 gi|14124954|gb|AAH08003.1| Ribosomal protein L3 [Homo sapiens]
 gi|15082461|gb|AAH12146.1| Ribosomal protein L3 [Homo sapiens]
 gi|15215372|gb|AAH12786.1| Ribosomal protein L3 [Homo sapiens]
 gi|15489128|gb|AAH13674.1| Ribosomal protein L3 [Homo sapiens]
 gi|15559314|gb|AAH14017.1| Ribosomal protein L3 [Homo sapiens]
 gi|15929157|gb|AAH15032.1| Ribosomal protein L3, isoform a [Homo sapiens]
 gi|16041773|gb|AAH15767.1| Ribosomal protein L3 [Homo sapiens]
 gi|21104408|dbj|BAB93474.1| ribosomal protein L3 [Homo sapiens]
 gi|39794638|gb|AAH63662.1| Ribosomal protein L3 [Homo sapiens]
 gi|47678663|emb|CAG30452.1| RPL3 [Homo sapiens]
 gi|56972440|gb|AAH88373.1| Ribosomal protein L3 [Homo sapiens]
 gi|78395076|gb|AAI07712.1| Ribosomal protein L3 [Homo sapiens]
 gi|90075246|dbj|BAE87303.1| unnamed protein product [Macaca fascicularis]
 gi|90076620|dbj|BAE87990.1| unnamed protein product [Macaca fascicularis]
 gi|90076640|dbj|BAE88000.1| unnamed protein product [Macaca fascicularis]
 gi|109451472|emb|CAK54597.1| RPL3 [synthetic construct]
 gi|109452068|emb|CAK54896.1| RPL3 [synthetic construct]
 gi|119580714|gb|EAW60310.1| ribosomal protein L3, isoform CRA_a [Homo sapiens]
 gi|189055072|dbj|BAG38056.1| unnamed protein product [Homo sapiens]
 gi|261859736|dbj|BAI46390.1| ribosomal protein L3 [synthetic construct]
          Length = 403

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287


>gi|226480224|emb|CAX78776.1| ribosomal protein L3 [Schistosoma japonicum]
          Length = 419

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F+  +++DV G+T GKGF G   R +   L          R     G    P RV ++
Sbjct: 209 NVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVARS 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+      T  N ++  +
Sbjct: 266 VARAGQKSYFHRTELNKKIYRI 287


>gi|149743311|ref|XP_001501957.1| PREDICTED: ribosomal protein L3 [Equus caballus]
          Length = 403

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287


>gi|73969069|ref|XP_531732.2| PREDICTED: similar to 60S ribosomal protein L3 (L4) isoform 2
           [Canis familiaris]
          Length = 403

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287


>gi|187607061|ref|NP_001120075.1| ribosomal protein L3 [Xenopus (Silurana) tropicalis]
 gi|165970448|gb|AAI58280.1| LOC100145083 protein [Xenopus (Silurana) tropicalis]
 gi|165971389|gb|AAI58514.1| LOC100145083 protein [Xenopus (Silurana) tropicalis]
          Length = 403

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287


>gi|297296032|ref|XP_001082799.2| PREDICTED: 60S ribosomal protein L3-like isoform 1 [Macaca mulatta]
          Length = 403

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287


>gi|281351162|gb|EFB26746.1| hypothetical protein PANDA_002530 [Ailuropoda melanoleuca]
          Length = 403

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  V
Sbjct: 267 ARAGQKGYHHRTEINKKIYKV 287


>gi|327239268|gb|AEA39501.1| ribosomal protein L3 [Ailuropoda melanoleuca]
 gi|327239370|gb|AEA39552.1| ribosomal protein L3 [Ailuropoda melanoleuca]
          Length = 403

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  V
Sbjct: 267 ARAGQKGYHHRTEINKKIYKV 287


>gi|301757551|ref|XP_002914602.1| PREDICTED: 60S ribosomal protein L3-like [Ailuropoda melanoleuca]
          Length = 403

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  V
Sbjct: 267 ARAGQKGYHHRTEINKKIYKV 287


>gi|7159730|emb|CAB76201.1| ribosomal protein L3 [Homo sapiens]
          Length = 343

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 155 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 211

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 212 ARAGQKGYHHRTEINKKIYKI 232


>gi|74185347|dbj|BAE30149.1| unnamed protein product [Mus musculus]
          Length = 403

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287


>gi|119580718|gb|EAW60314.1| ribosomal protein L3, isoform CRA_e [Homo sapiens]
 gi|119580723|gb|EAW60319.1| ribosomal protein L3, isoform CRA_e [Homo sapiens]
          Length = 351

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 158 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 214

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 215 ARAGQKGYHHRTEINKKIYKI 235


>gi|71296875|gb|AAH36582.1| RPL3 protein [Homo sapiens]
 gi|119580715|gb|EAW60311.1| ribosomal protein L3, isoform CRA_b [Homo sapiens]
 gi|119580721|gb|EAW60317.1| ribosomal protein L3, isoform CRA_b [Homo sapiens]
          Length = 251

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 58  VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 114

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 115 ARAGQKGYHHRTEINKKIYKI 135


>gi|319079393|ref|NP_001187033.1| ribosomal protein L3 [Ictalurus punctatus]
 gi|15293867|gb|AAK95126.1|AF401554_1 ribosomal protein L3 [Ictalurus punctatus]
          Length = 402

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F+  +++DV G+T G G+ G   R +   L          R     G    P RV  +
Sbjct: 208 NVFSQDEMIDVIGVTKGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFS 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 265 VARAGQKGYHHRTEVNKKIYKI 286


>gi|327272509|ref|XP_003221027.1| PREDICTED: 60S ribosomal protein L3-like [Anolis carolinensis]
          Length = 403

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287


>gi|73969057|ref|XP_859775.1| PREDICTED: similar to ribosomal protein L3 isoform 3 [Canis
           familiaris]
 gi|73969059|ref|XP_859808.1| PREDICTED: similar to ribosomal protein L3 isoform 4 [Canis
           familiaris]
 gi|73969065|ref|XP_859912.1| PREDICTED: similar to ribosomal protein L3 isoform 7 [Canis
           familiaris]
          Length = 251

 Score = 46.7 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 58  VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 114

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 115 ARAGQKGYHHRTEINKKIYKI 135


>gi|308323287|gb|ADO28780.1| 60S ribosomal protein l3 [Ictalurus punctatus]
          Length = 403

 Score = 46.7 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F+  +++DV G+T G G+ G   R +   L          R     G    P RV  +
Sbjct: 209 NVFSQDEMIDVIGVTKGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFS 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEVNKKIYKI 287


>gi|114608746|ref|XP_518669.2| PREDICTED: similar to ribosomal protein L3 [Pan troglodytes]
          Length = 383

 Score = 46.7 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGKDEMIDVIGVTKGKGYKGVTSRWHTKKLPRE--THRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G    T  N ++  +
Sbjct: 267 ARAGQKGYRHRTEINKKIYKI 287


>gi|75076108|sp|Q4R5Q0|RL3_MACFA RecName: Full=60S ribosomal protein L3
 gi|67970465|dbj|BAE01575.1| unnamed protein product [Macaca fascicularis]
          Length = 403

 Score = 46.7 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G R  P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAR-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287


>gi|22203712|gb|AAM94270.1| ribosomal protein L3 [Chlamys farreri]
          Length = 396

 Score = 46.3 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 46/127 (36%), Gaps = 15/127 (11%)

Query: 62  SKPMRGFFSSV-------NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGM 114
           +K M+             N     +  ++  +K +  +PVG     S F + + +D+ G+
Sbjct: 169 TKLMKKRQKKAHIMEIQVNGGTIAQKVDWAREKMESSVPVG-----SVFAMDENIDIIGV 223

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           T GKG  G   R +   L          R     G    P RV      AG+ G +  T 
Sbjct: 224 TKGKGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFTVARAGQKGYHHRTE 280

Query: 175 KNLEVVS 181
            N ++  
Sbjct: 281 INEKIYR 287


>gi|198285589|gb|ACH85333.1| ribosomal protein L3-like [Salmo salar]
          Length = 251

 Score = 46.3 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + FT  +++DV G+T G G+ G   R +   L          R     G    P RV  +
Sbjct: 57  NVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPSRVAFS 113

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 114 VARAGQKGYHHRTEINKKIYKI 135


>gi|237862632|gb|ACR24941.1| ribosomal protein L3 [Lepidochitona cinerea]
          Length = 351

 Score = 46.3 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 3/81 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
             F   +L+D+ G+T GKG  G   R +   L          R     G    P RV  +
Sbjct: 186 EVFAQDELIDIIGVTKGKGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQYS 242

Query: 161 KKMAGRMGGNRVTVKNLEVVS 181
              AG+ G +  T  N ++  
Sbjct: 243 VARAGQKGYHHRTEINKKIYR 263


>gi|164605513|dbj|BAF98579.1| ribosomal protein L3 [Solea senegalensis]
          Length = 403

 Score = 46.3 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            FT  +++DV G+T G G+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFTQDEMIDVIGVTKGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287


>gi|3914741|sp|Q29293|RL3_PIG RecName: Full=60S ribosomal protein L3
          Length = 130

 Score = 46.3 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 30/81 (37%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G        F   
Sbjct: 7   VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAWHPARXAFS-V 63

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 64  ARAGQKGYHHRTEINKKIYKI 84


>gi|156359545|ref|XP_001624828.1| predicted protein [Nematostella vectensis]
 gi|156211630|gb|EDO32728.1| predicted protein [Nematostella vectensis]
          Length = 94

 Score = 45.9 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 29/81 (35%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F+  +++DV G+T G GF G   R     L          R     G        F   
Sbjct: 5   VFSPDEMIDVIGVTKGHGFKGVTYRWGTKKLP--RKTHKGLRKVACIGAWHPARVSFS-V 61

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 62  ARAGQAGYHHRTELNKKIYRI 82


>gi|326929147|ref|XP_003210731.1| PREDICTED: 60S ribosomal protein L3-like [Meleagris gallopavo]
          Length = 407

 Score = 45.9 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F+  +++DV G+T G G  G   R +   L          R     G    P RV  +
Sbjct: 209 SVFSQNEMIDVIGVTKGHGMKGVTSRWHSKKLP--RKTHKGLRKVACIGAW-HPARVGYS 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTELNKKIFRI 287


>gi|22758910|gb|AAN05614.1| ribosomal protein L3 [Argopecten irradians]
          Length = 254

 Score = 45.9 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 46/133 (34%), Gaps = 15/133 (11%)

Query: 56  AKVKNVSKPMRGFFSSV-------NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQL 108
                 +K ++             N     +  ++  +K +  +PVG     S F + + 
Sbjct: 15  RYAHTQTKLLKKRQKKAHIMEIQVNGGTISQKVDWAREKMESSVPVG-----SVFAMDEN 69

Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
           +D+ G+T GKG  G   R +   L          R     G    P RV      AG+ G
Sbjct: 70  IDIIGVTKGKGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFTVARAGQKG 126

Query: 169 GNRVTVKNLEVVS 181
            +  T  N ++  
Sbjct: 127 YHHRTEINKKIYR 139


>gi|50755665|ref|XP_414843.1| PREDICTED: similar to MGC108366 protein [Gallus gallus]
          Length = 407

 Score = 45.9 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F+  +++DV G+T G G  G   R +   L          R     G    P RV  +
Sbjct: 209 SVFSQNEMIDVIGVTKGHGMKGVTSRWHSKKLP--RKTHKGLRKVACIGAW-HPARVGYS 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTELNKKIFRI 287


>gi|148223643|ref|NP_001088030.1| ribosomal protein L3-like [Xenopus laevis]
 gi|52221158|gb|AAH82692.1| LOC494722 protein [Xenopus laevis]
          Length = 407

 Score = 45.9 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG  G   R +   L          R     G    P RV    
Sbjct: 210 VFCQDEMIDVIGVTKGKGVRGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVAYTI 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYRI 287


>gi|71896067|ref|NP_001025612.1| ribosomal protein L3-like [Xenopus (Silurana) tropicalis]
 gi|60688143|gb|AAH91070.1| MGC108366 protein [Xenopus (Silurana) tropicalis]
          Length = 407

 Score = 45.9 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F   +++DV G+T GKG  G   R +   L          R     G    P RV   
Sbjct: 209 SVFGQDEMIDVIGVTKGKGVRGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVAYT 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 IARAGQKGYHHRTEINKKIYRI 287


>gi|327287585|ref|XP_003228509.1| PREDICTED: 60S ribosomal protein L3-like [Anolis carolinensis]
          Length = 399

 Score = 45.9 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F+  +++DV G+T G G  G   R +   L          R     G    P RV  +
Sbjct: 201 SVFSQSEMIDVIGVTKGHGMKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGYS 257

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 258 IARAGQKGYHHRTELNKKIYRI 279


>gi|110456408|gb|ABG74707.1| putative ribosomal protein L3e [Diaphorina citri]
          Length = 201

 Score = 45.9 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 27/73 (36%), Gaps = 3/73 (4%)

Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
           +D  G+T GKGF G   R +   L          R     G    P RV      AG+ G
Sbjct: 2   IDCIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFTVARAGQKG 58

Query: 169 GNRVTVKNLEVVS 181
            +  T  N ++  
Sbjct: 59  YHHRTELNKKIYR 71


>gi|301769703|ref|XP_002920231.1| PREDICTED: 60S ribosomal protein L3-like [Ailuropoda melanoleuca]
          Length = 444

 Score = 45.5 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F+  +++DV  +T G+G  G   R +   L          R     G    P RV  +
Sbjct: 246 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 302

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 303 IARAGQKGYHHRTELNKKIYRI 324


>gi|296219367|ref|XP_002755828.1| PREDICTED: 60S ribosomal protein L3-like [Callithrix jacchus]
          Length = 424

 Score = 45.5 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F+  +++DV  +T G+G  G   R +   L          R     G    P RV  +
Sbjct: 226 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 282

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 283 IARAGQKGYHHRTELNKKIYRI 304


>gi|48597014|ref|NP_001001590.1| 60S ribosomal protein L3 [Danio rerio]
 gi|45504885|gb|AAS66967.1| ribosomal protein L3 [Danio rerio]
          Length = 403

 Score = 45.5 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 3/83 (3%)

Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
            + F+  +++DV G+T G G  G   R +   L          R     G    P RV  
Sbjct: 208 ANVFSQDEMIDVIGVTKGHGCKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAF 264

Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182
           +   AG+ G +  T  N ++  +
Sbjct: 265 SVARAGQKGYHHRTEINKKIYKI 287


>gi|78369254|ref|NP_001030578.1| 60S ribosomal protein L3-like [Bos taurus]
 gi|88932612|sp|Q3SZ10|RL3L_BOVIN RecName: Full=60S ribosomal protein L3-like
 gi|74267896|gb|AAI03273.1| Ribosomal protein L3-like [Bos taurus]
 gi|296473512|gb|DAA15627.1| 60S ribosomal protein L3-like [Bos taurus]
          Length = 407

 Score = 45.5 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F+  +++DV  +T G+G  G   R +   L          R     G    P RV  +
Sbjct: 209 SVFSQNEIIDVIAVTKGRGIKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 IARAGQKGYHHRTELNKKIYRI 287


>gi|60688481|gb|AAH91460.1| Ribosomal protein L3 [Danio rerio]
 gi|182889202|gb|AAI64784.1| Rpl3 protein [Danio rerio]
          Length = 403

 Score = 45.5 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 3/83 (3%)

Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
            + F+  +++DV G+T G G  G   R +   L          R     G    P RV  
Sbjct: 208 ANVFSQDEMIDVIGVTKGHGCKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAF 264

Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182
           +   AG+ G +  T  N ++  +
Sbjct: 265 SVARAGQKGYHHRTEINKKIYKI 287


>gi|239789793|dbj|BAH71497.1| ACYPI009439 [Acyrthosiphon pisum]
          Length = 193

 Score = 45.5 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 3/74 (4%)

Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
           +D  G+T G+G+ G   R +   L          R     G    P RV      AG+ G
Sbjct: 2   IDCIGVTKGRGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFTVARAGQKG 58

Query: 169 GNRVTVKNLEVVSV 182
            +  T  N ++  +
Sbjct: 59  YHHRTEINKKIYRI 72


>gi|126335506|ref|XP_001366065.1| PREDICTED: similar to Ribosomal protein L3-like [Monodelphis
           domestica]
          Length = 505

 Score = 45.1 bits (106), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F+  +++DV  +T G+G  G   R +   L          R     G    P RV  + 
Sbjct: 307 VFSQSEVIDVIAVTKGRGMKGVTSRWHAKKLP--RKTHKGLRKVACIGAW-HPARVGYSI 363

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 364 ARAGQKGYHHRTELNKKIYRI 384


>gi|291415728|ref|XP_002724100.1| PREDICTED: ribosomal protein L3-like [Oryctolagus cuniculus]
          Length = 407

 Score = 45.1 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F+  +++DV  +T G+G  G   R +   L          R     G    P RV  +
Sbjct: 209 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 IARAGQKGYHHRTELNKKIYRI 287


>gi|74185237|dbj|BAE30097.1| unnamed protein product [Mus musculus]
          Length = 403

 Score = 45.1 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T  KG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKDKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287


>gi|197632293|gb|ACH70870.1| ribosomal protein L3 [Salmo salar]
          Length = 403

 Score = 45.1 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + FT  +++DV G+T G G+ G   R +   L          R     G        F  
Sbjct: 209 NVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAWHLSRVAFS- 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 VARAGQKGYHHRTEINKKIYKI 287


>gi|14336774|gb|AAK61301.1|AE006640_5 60S ribosomal protein L3 like [Homo sapiens]
          Length = 406

 Score = 45.1 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F+  +++DV  +T G+G  G   R +   L          R     G    P RV  +
Sbjct: 208 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 264

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 265 IARAGQKGYHHRTELNKKIFRI 286


>gi|4826988|ref|NP_005052.1| 60S ribosomal protein L3-like [Homo sapiens]
 gi|2500230|sp|Q92901|RL3L_HUMAN RecName: Full=60S ribosomal protein L3-like
 gi|1638884|gb|AAC50777.1| ribosomal protein L3-like [Homo sapiens]
 gi|30046542|gb|AAH50413.1| Ribosomal protein L3-like [Homo sapiens]
 gi|119606005|gb|EAW85599.1| ribosomal protein L3-like [Homo sapiens]
          Length = 407

 Score = 45.1 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F+  +++DV  +T G+G  G   R +   L          R     G    P RV  +
Sbjct: 209 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 IARAGQKGYHHRTELNKKIFRI 287


>gi|73959559|ref|XP_547185.2| PREDICTED: similar to 60S ribosomal protein L3-like [Canis
           familiaris]
          Length = 494

 Score = 45.1 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F+  +++DV  +T G+G  G   R +   L          R     G    P RV  +
Sbjct: 296 SVFSQNEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 352

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 353 IARAGQKGYHHRTELNKKIYRI 374


>gi|255653009|ref|NP_001157417.1| ribosomal protein L3-like isoform 1 [Mus musculus]
          Length = 407

 Score = 44.8 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F+  +++DV  +T G+G  G   R +   L          R     G    P RV  +
Sbjct: 209 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 IARAGQKGYHHRTELNKKIYRI 287


>gi|224070234|ref|XP_002187558.1| PREDICTED: similar to MGC108366 protein [Taeniopygia guttata]
          Length = 380

 Score = 44.8 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F+  +++DV G+T G G  G   R +   L          R     G    P RV  +
Sbjct: 182 SVFSQNEMIDVIGVTKGHGMKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGYS 238

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 239 IARAGQKGYHHRTEINKKIYRI 260


>gi|189053728|dbj|BAG35980.1| unnamed protein product [Homo sapiens]
          Length = 407

 Score = 44.8 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F+  +++DV  +T G+G  G   R +   L          R     G    P RV  +
Sbjct: 209 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 IARAGQKGYHHRTELNKKIFRI 287


>gi|300797628|ref|NP_001178518.1| 60S ribosomal protein L3-like [Rattus norvegicus]
 gi|109490334|ref|XP_001058430.1| PREDICTED: ribosomal protein L3-like [Rattus norvegicus]
          Length = 407

 Score = 44.8 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F+  +++DV  +T G+G  G   R +   L          R     G    P RV  +
Sbjct: 209 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 IARAGQKGYHHRTELNKKIYRI 287


>gi|109127211|ref|XP_001082003.1| PREDICTED: 60S ribosomal protein L3-like [Macaca mulatta]
          Length = 407

 Score = 44.8 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F+  +++DV  +T G+G  G   R +   L          R     G    P RV  +
Sbjct: 209 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 IARAGQKGYHHRTELNKKIYRI 287


>gi|281341592|gb|EFB17176.1| hypothetical protein PANDA_008982 [Ailuropoda melanoleuca]
          Length = 407

 Score = 44.8 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F+  +++DV  +T G+G  G   R +   L          R     G    P RV  +
Sbjct: 209 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 IARAGQKGYHHRTELNKKIYRI 287


>gi|3642669|gb|AAC36524.1| ribosomal protein L3 [Mus musculus]
          Length = 117

 Score = 44.8 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 28  VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 84

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 85  ARAGQKGYHHRTEINKKIYKI 105


>gi|301791988|ref|XP_002930962.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L3-like,
           partial [Ailuropoda melanoleuca]
          Length = 355

 Score = 44.8 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 61/203 (30%), Gaps = 38/203 (18%)

Query: 3   SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
           +  +  K GMT +       G ++        VT++   +  V         GY     G
Sbjct: 48  TAFLGYKAGMTHIVXEVSRPGSKVKKKEIVEDVTIVEAPSMVV------GTMGYEETIQG 101

Query: 53  AGEAK---VKNVSKPMRGFFSSVNVSPKKKLFEFR----------VQKDDDLLPVGSVFS 99
               K    +++    +  F       KK   ++           ++KD + +  G +  
Sbjct: 102 LCTLKTIFAEHIHDKCKRHFYKNWGKSKKAFNKYCKWQDNDGKQQLEKDFNSMRYGQIIH 161

Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
                    + V  +T GKG+       +   L       +     G  G        F 
Sbjct: 162 DEM------IHVISVTKGKGYKEVTSHWHTKKLPCKTHQGLC--KVGCIGAWHPAQVAFS 213

Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182
               AG+ G +  T  N ++  +
Sbjct: 214 -MAWAGQKGYHHCTEINKKIYKI 235


>gi|149751051|ref|XP_001497954.1| PREDICTED: similar to Ribosomal protein L3-like [Equus caballus]
          Length = 407

 Score = 44.8 bits (105), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F+  +++DV  +T G+G  G   R +   L          R     G    P RV  +
Sbjct: 209 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 IARAGQKGYHHRTELNKKIYRI 287


>gi|291402716|ref|XP_002717715.1| PREDICTED: ribosomal protein L3-like [Oryctolagus cuniculus]
          Length = 428

 Score = 44.8 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R      +         R     G        F   
Sbjct: 236 VFGQDKMIDVIGVTKGKGYKGVTSRW--HTKKLLRKTHRGLRKVACIGAWHPAHVAFS-V 292

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 293 ARAGQKGYHHRTEINKKIYKI 313


>gi|114660361|ref|XP_001160309.1| PREDICTED: similar to ribosomal protein L3-like [Pan troglodytes]
          Length = 407

 Score = 44.8 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F+  +++DV  +T G+G  G   R +   L          R     G    P RV  +
Sbjct: 209 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 265

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 266 IARAGQKGYHHRTELNKKIFRI 287


>gi|13384820|ref|NP_079701.1| ribosomal protein L3-like isoform 2 [Mus musculus]
 gi|12832343|dbj|BAB22066.1| unnamed protein product [Mus musculus]
 gi|12835407|dbj|BAB23247.1| unnamed protein product [Mus musculus]
 gi|148690417|gb|EDL22364.1| ribosomal protein L3-like [Mus musculus]
 gi|148877901|gb|AAI45877.1| Ribosomal protein L3-like [Mus musculus]
 gi|148877992|gb|AAI45879.1| Ribosomal protein L3-like [Mus musculus]
          Length = 240

 Score = 44.0 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F+  +++DV  +T G+G  G   R +   L          R     G    P RV  +
Sbjct: 42  SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 98

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 99  IARAGQKGYHHRTELNKKIYRI 120


>gi|326574320|gb|ADZ95675.1| 60S ribosomal protein L3 [Nosema bombycis]
          Length = 664

 Score = 44.0 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 18/78 (23%)

Query: 148 TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVK-------------GC 194
            G    P RV      AG+MG +R T  N +V  + +   LI  K             G 
Sbjct: 391 IGAW-HPSRVMTTVARAGQMGFHRRTETNKKVYMIGNGNELI--KTEFDLTEKPITPLGG 447

Query: 195 VP--GAKKNSWILVRDSF 210
           +P  G+ KN +I+V+ + 
Sbjct: 448 IPHYGSIKNDYIMVKGAV 465


>gi|55391486|gb|AAH85243.1| Rpl3l protein [Mus musculus]
          Length = 281

 Score = 44.0 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F+  +++DV  +T G+G  G   R +   L          R     G    P RV  +
Sbjct: 83  SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 139

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 140 IARAGQKGYHHRTELNKKIYRI 161


>gi|296237103|ref|XP_002763611.1| PREDICTED: 60S ribosomal protein L3-like isoform 1 [Callithrix
           jacchus]
          Length = 403

 Score = 44.0 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G++  KG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVSKRKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287


>gi|149052059|gb|EDM03876.1| rCG33081 [Rattus norvegicus]
          Length = 255

 Score = 44.0 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           S F+  +++DV  +T G+G  G   R +   L          R     G    P RV  +
Sbjct: 57  SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 113

Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
              AG+ G +  T  N ++  +
Sbjct: 114 IARAGQKGYHHRTELNKKIYRI 135


>gi|148807241|gb|ABR13330.1| putative 60S ribosomal protein L3 [Prunus dulcis]
          Length = 284

 Score = 43.6 bits (102), Expect = 0.021,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 34/116 (29%), Gaps = 6/116 (5%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + +     K  +     + V+      +  V+                F   +++D
Sbjct: 169 LAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQK--VEFAKSFFEKQVPIDA-VFQKDEMID 225

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166
           + G+T GKG+ G + R     L          R     G    P R       AG 
Sbjct: 226 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARFSXTVARAGH 278


>gi|109100340|ref|XP_001106805.1| PREDICTED: 60S ribosomal protein L3-like isoform 2 [Macaca mulatta]
          Length = 403

 Score = 43.2 bits (101), Expect = 0.022,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G     +   L          R     G R  P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSHWHTKKLP--RKTHRGLRKVACIGAR-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +  T  N ++  +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287


>gi|294919384|ref|XP_002778527.1| ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
 gi|239887018|gb|EER10322.1| ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
          Length = 178

 Score = 43.2 bits (101), Expect = 0.027,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 26/74 (35%), Gaps = 3/74 (4%)

Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
           VD+ G+T G G +    R     L          R     G    P RV      AG+MG
Sbjct: 2   VDIIGVTKGHGNTSVTTRWGVTRL--ARKTHRGLRKVACIGAW-HPARVQFQVPRAGQMG 58

Query: 169 GNRVTVKNLEVVSV 182
            +     N ++  +
Sbjct: 59  YHHRVEINKKIYRI 72


>gi|149620465|ref|XP_001511933.1| PREDICTED: similar to Ribosomal protein L3-like [Ornithorhynchus
           anatinus]
          Length = 342

 Score = 42.8 bits (100), Expect = 0.033,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F+  ++VDV  +T G+G  G   R +   L          R     G    P RV  +
Sbjct: 216 AVFSQNEMVDVIAVTKGRGMKGVTSRWHAKKLP--RKTHKGLRKVACIGAW-HPARVGYS 272

Query: 161 KKMAGRMGGNRVTVKNLEVVS 181
              AG+ G +  T  N ++  
Sbjct: 273 IARAGQKGYHHRTEINKKIYR 293


>gi|198435984|ref|XP_002132034.1| PREDICTED: similar to ribosomal protein L3 [Ciona intestinalis]
          Length = 411

 Score = 42.8 bits (100), Expect = 0.037,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 3/81 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
           + F   +++D+ G+  G G  G   R +   L          R     G    P RV  +
Sbjct: 209 NIFAKDEMIDIIGVNKGHGEKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVAYS 265

Query: 161 KKMAGRMGGNRVTVKNLEVVS 181
              +G+ G +  T  N ++  
Sbjct: 266 VARSGQKGYHHRTEVNKKIYR 286


>gi|226475920|emb|CAX72050.1| ribosomal protein L3 [Schistosoma japonicum]
          Length = 202

 Score = 42.1 bits (98), Expect = 0.058,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 3/68 (4%)

Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
           T GKGF G   R +   L          R     G    P RV ++   AG+ G    T 
Sbjct: 6   TKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVARSVARAGQKGYFHRTE 62

Query: 175 KNLEVVSV 182
            N ++  +
Sbjct: 63  LNKKIYRI 70


>gi|119580720|gb|EAW60316.1| ribosomal protein L3, isoform CRA_g [Homo sapiens]
          Length = 286

 Score = 41.3 bits (96), Expect = 0.098,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 3/77 (3%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMGGNRVTVKNLE 178
             AG+ G +  T  N +
Sbjct: 267 ARAGQKGYHHRTEINKK 283


>gi|309266996|ref|XP_001476854.2| PREDICTED: 60S ribosomal protein L3-like, partial [Mus musculus]
          Length = 180

 Score = 40.9 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 24/67 (35%), Gaps = 3/67 (4%)

Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
            GKG+ G   R +   L          R     G    P RV  +   AG+ G +  T  
Sbjct: 1   KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSVARAGQKGYHYRTEI 57

Query: 176 NLEVVSV 182
           N ++  +
Sbjct: 58  NKKIYKI 64


>gi|213863398|ref|ZP_03386653.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 33

 Score = 40.9 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)

Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
           VD + G++L+KG VPG +    ++VR + K  
Sbjct: 1   VDAENGVLLIKGAVPG-RTGGLVMVRSAIKRG 31


>gi|987972|emb|CAA90883.1| ribosomal protein L3 [Rickettsia prowazekii]
          Length = 23

 Score = 40.5 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/23 (56%), Positives = 20/23 (86%)

Query: 1  MRSGVVARKLGMTCVYNIEGRRI 23
          MR+G++A+K+GMT V+N +G RI
Sbjct: 1  MRTGIIAQKVGMTSVFNDKGERI 23


>gi|297715281|ref|XP_002834016.1| PREDICTED: 60S ribosomal protein L3-like, partial [Pongo abelii]
          Length = 199

 Score = 39.8 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 3/76 (3%)

Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166
           +++DV  +T G+G  G   R +   L          R     G    P RV  +   AG+
Sbjct: 83  EVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCSIARAGQ 139

Query: 167 MGGNRVTVKNLEVVSV 182
            G +  T  N ++  +
Sbjct: 140 KGYHHRTELNKKIYRI 155


>gi|190895944|gb|ACE96485.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895946|gb|ACE96486.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895948|gb|ACE96487.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895950|gb|ACE96488.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895952|gb|ACE96489.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895954|gb|ACE96490.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895958|gb|ACE96492.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895960|gb|ACE96493.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895962|gb|ACE96494.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895964|gb|ACE96495.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895966|gb|ACE96496.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895968|gb|ACE96497.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895970|gb|ACE96498.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895972|gb|ACE96499.1| casein kinase II regulatory subunit [Populus tremula]
 gi|190895974|gb|ACE96500.1| casein kinase II regulatory subunit [Populus tremula]
          Length = 99

 Score = 38.6 bits (89), Expect = 0.64,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 29/101 (28%), Gaps = 5/101 (4%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + +     K  +     + V+      +  V                 F   +++D
Sbjct: 2   LAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQK--VDFAYGFFEKQVPIDA-VFQKDEMID 58

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151
           V G+T GKG+ G + R     L          R     G  
Sbjct: 59  VIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW 97


>gi|325577125|ref|ZP_08147609.1| AT family autotransporter/adhesin [Haemophilus parainfluenzae
          ATCC 33392]
 gi|325160707|gb|EGC72828.1| AT family autotransporter/adhesin [Haemophilus parainfluenzae
          ATCC 33392]
          Length = 1348

 Score = 38.2 bits (88), Expect = 0.71,   Method: Composition-based stats.
 Identities = 8/23 (34%), Positives = 15/23 (65%)

Query: 3  SGVVARKLGMTCVYNIEGRRIPV 25
           G+V RK+G+T ++  +G  + V
Sbjct: 2  IGLVGRKVGVTRIFKEDGVSVAV 24


>gi|190895956|gb|ACE96491.1| casein kinase II regulatory subunit [Populus tremula]
          Length = 99

 Score = 38.2 bits (88), Expect = 0.71,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 29/101 (28%), Gaps = 5/101 (4%)

Query: 51  VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
           +   + +     K  +     + V+      +  V                 F   +++D
Sbjct: 2   LAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQK--VDFGYGFFEKQVPIDA-VFQKDEMID 58

Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151
           V G+T GKG+ G + R     L          R     G  
Sbjct: 59  VIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW 97


>gi|40641603|emb|CAE54281.1| putative ribosomal protein [Triticum aestivum]
          Length = 98

 Score = 37.4 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 2/52 (3%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
           + F   +++D+ G+T GKG+ G + R     L          R     G   
Sbjct: 48  AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAWA 97


>gi|291288660|ref|YP_003505476.1| thiamine monophosphate synthase [Denitrovibrio acetiphilus DSM
           12809]
 gi|290885820|gb|ADD69520.1| thiamine monophosphate synthase [Denitrovibrio acetiphilus DSM
           12809]
          Length = 181

 Score = 37.1 bits (85), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 15/99 (15%)

Query: 40  TLDKNGYMAVQVG---AGEAKVKNVSKPMRGFFS-------SVNVSPKKKLFEFRVQKDD 89
           T  K GY AVQ+G     E+  ++  K   G+ +       S  V        F  +K+ 
Sbjct: 64  TASKYGYDAVQLGKDSYIESVRRDFPKLRIGYSAHSMDELESKGVDYFTLSPIFFTKKNY 123

Query: 90  DLLPVGSV----FSPSYFT-VGQLVDVTGMTIGKGFSGA 123
           ++ P+G+V         +   G   +      GKGF+G 
Sbjct: 124 EVKPLGTVDVSHIDSEIYALGGISSENINRLKGKGFAGV 162


>gi|255636886|gb|ACU18776.1| unknown [Glycine max]
          Length = 257

 Score = 37.1 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 2/50 (4%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
           + F   +++D+ G+T GKG+ G + R     L          R     G 
Sbjct: 210 AVFHKDEMIDIVGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGA 257


>gi|291391876|ref|XP_002712286.1| PREDICTED: ribosomal protein L3-like [Oryctolagus cuniculus]
          Length = 188

 Score = 37.1 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 9/77 (11%)

Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHR---SHGSTGCRQDPGRVFKNKKMAG 165
           ++VTG+T GKG+ G   R +   L        +HR        G      + F     A 
Sbjct: 2   INVTGVTKGKGYKGVTSRWHTKKLPR-----KTHRGLPKVACIGAWHLARKAFS-VAWAR 55

Query: 166 RMGGNRVTVKNLEVVSV 182
           + G +  T  N ++  +
Sbjct: 56  QKGYHHRTEINKKIYKI 72


>gi|347964|gb|AAA91344.1| TARBP-b [Homo sapiens]
          Length = 277

 Score = 36.7 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 25/71 (35%), Gaps = 3/71 (4%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++DV G+T GKG+ G   R +   L          R     G        F   
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAWHPVRVAFS-V 266

Query: 162 KMAGRMGGNRV 172
             AG+ G +  
Sbjct: 267 ARAGQKGYHHR 277


>gi|193077372|gb|ABO12176.2| ABC transporter-like protein [Acinetobacter baumannii ATCC 17978]
          Length = 753

 Score = 36.3 bits (83), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 7/64 (10%)

Query: 147 STG-CRQDPGRVFKNKKMAGRMGGNRVTVKN-----LEVVSVDDKRGLILVKGCVPGAKK 200
           S+G       R    KK   RMG   +++KN     L+ + VD  +  + V   V G+ K
Sbjct: 433 SSGLAGAFFRRPNTYKKEP-RMGNEWISIKNAHLFNLKNIDVDIPKNCLTVITGVAGSGK 491

Query: 201 NSWI 204
           ++ I
Sbjct: 492 STLI 495


>gi|126641794|ref|YP_001084778.1| ABC transporter-like protein [Acinetobacter baumannii ATCC 17978]
          Length = 669

 Score = 36.3 bits (83), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 7/64 (10%)

Query: 147 STG-CRQDPGRVFKNKKMAGRMGGNRVTVKN-----LEVVSVDDKRGLILVKGCVPGAKK 200
           S+G       R    KK   RMG   +++KN     L+ + VD  +  + V   V G+ K
Sbjct: 349 SSGLAGAFFRRPNTYKKEP-RMGNEWISIKNAHLFNLKNIDVDIPKNCLTVITGVAGSGK 407

Query: 201 NSWI 204
           ++ I
Sbjct: 408 STLI 411


>gi|77553900|gb|ABA96696.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1287

 Score = 35.9 bits (82), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 33/107 (30%), Gaps = 10/107 (9%)

Query: 46   YMAVQVGAGEAKVKNV--------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV 97
            Y A+ VG  +AK   V        SK + G         K++  +  ++    +    + 
Sbjct: 943  YEAILVGLKKAKALGVRRLLIRTDSKLVAGHVDKS-FEAKEEGMKRYLEAVRSMEKCFAD 1001

Query: 98   FSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRS 144
             +  +   GQ  +   +         ++R  F      H      R 
Sbjct: 1002 ITVEHLPRGQNEEADALAKSASCGAHIRRAPFSKSYM-HQARKWRRK 1047


>gi|70909597|emb|CAJ17224.1| ribosomal protein L3e [Micromalthus debilis]
          Length = 178

 Score = 35.9 bits (82), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 22/65 (33%), Gaps = 3/65 (4%)

Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
           KG+ G   R +   L          R     G    P RV      AG+ G +  T  N 
Sbjct: 1   KGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFTVARAGQKGYHHRTEVNK 57

Query: 178 EVVSV 182
           ++  +
Sbjct: 58  KIYRI 62


>gi|119630150|gb|EAX09745.1| hCG1794419, isoform CRA_a [Homo sapiens]
          Length = 188

 Score = 35.9 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 3/75 (4%)

Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
           +D+ G+T GKG+ G     +   L   H            G        F     AG+ G
Sbjct: 2   IDIIGVTKGKGYKGVTSCWHTKKLP--HKTHRGLCKVAWIGAWHPDHVAFS-MACAGQKG 58

Query: 169 GNRVTVKNLEVVSVD 183
            +  T  N ++  +D
Sbjct: 59  DHHHTEINKKICKID 73


>gi|148682756|gb|EDL14703.1| mCG1036344 [Mus musculus]
          Length = 360

 Score = 35.9 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 4/81 (4%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            F   +++ V  +T GKG+ G   R +   L          R     G    P RV  + 
Sbjct: 214 VFGQDEMIIVIDVTKGKGYKGVTSRWHTKKLP--RKTHQGLRKVACIGAW-HPARVAFSV 270

Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
             AG+ G +     N ++  +
Sbjct: 271 AQAGQKGYHHRKETN-KIYKI 290


>gi|324516200|gb|ADY46457.1| 60S ribosomal protein L3 [Ascaris suum]
          Length = 204

 Score = 35.1 bits (80), Expect = 6.6,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 22/48 (45%)

Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148
           S F   +++D  G+T GKGF G   R +   L       +  + +G T
Sbjct: 57  SVFAQDEMIDCIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKKRNGGT 104


>gi|126173842|ref|YP_001049991.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica
           OS155]
 gi|125997047|gb|ABN61122.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica
           OS155]
          Length = 621

 Score = 35.1 bits (80), Expect = 6.7,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 30/95 (31%), Gaps = 7/95 (7%)

Query: 27  VLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ 86
           V+ L+   VVV R  + +    + +          +   R      N + + K  E   Q
Sbjct: 461 VIELEPNHVVVVRVKEHHDAGTLALA-----EVKANIAERLKQDQANEAARAKAQELMAQ 515

Query: 87  KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
                  +G V         Q VD     +GK F 
Sbjct: 516 VKAGATDLGLVAKAKLGRGAQDVDAA--IVGKAFQ 548


>gi|302864881|ref|YP_003833518.1| hypothetical protein Micau_0375 [Micromonospora aurantiaca ATCC
           27029]
 gi|315501165|ref|YP_004080052.1| hypothetical protein ML5_0349 [Micromonospora sp. L5]
 gi|302567740|gb|ADL43942.1| hypothetical protein Micau_0375 [Micromonospora aurantiaca ATCC
           27029]
 gi|315407784|gb|ADU05901.1| hypothetical protein ML5_0349 [Micromonospora sp. L5]
          Length = 681

 Score = 35.1 bits (80), Expect = 7.4,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 41/168 (24%), Gaps = 10/168 (5%)

Query: 44  NGYMAVQVGAGEAKVKN------VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV 97
           + Y A Q+G   A+          +    G        P     E+ V +      +G  
Sbjct: 50  DSYTAEQLGRHMARRVKELADDPTTPLFFGRLDFGGDDPDHAGREYHVGRRHVTDELGEP 109

Query: 98  FSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRV 157
               +                      +R  F     T             G        
Sbjct: 110 LVLDWRAPVSRSFYRASARDPQGVAVRRRFGFSAGTLTSFEDEHLDRGEELGTASRILTA 169

Query: 158 FKNKKMAGRMGGNRVTVKNL--EVVSVDDKRGLILVKGCVPGAKKNSW 203
              +   G M     T++    E+V  D     I V+G  PG  K + 
Sbjct: 170 EIERPRVGPMRDIVATIQPEQDELVRADLTDS-ICVQGA-PGTGKTAV 215


>gi|153000126|ref|YP_001365807.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica
           OS185]
 gi|160874748|ref|YP_001554064.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica
           OS195]
 gi|151364744|gb|ABS07744.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica
           OS185]
 gi|160860270|gb|ABX48804.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica
           OS195]
 gi|315266990|gb|ADT93843.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica
           OS678]
          Length = 621

 Score = 34.7 bits (79), Expect = 8.0,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 31/95 (32%), Gaps = 7/95 (7%)

Query: 27  VLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ 86
           V+ L+   VVV R  + +    + +          +   R      N + + K  E   Q
Sbjct: 461 VIELEPNHVVVVRVKEHHDAGTLALA-----EVKANIAERLKQDQANEAARAKAQELMAQ 515

Query: 87  KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
                + +G V         Q VD     +GK F 
Sbjct: 516 VKAGAMDLGLVAKAKLGRGAQDVDAA--IVGKAFQ 548


>gi|323650150|gb|ADX97161.1| 60S ribosomal protein l3 [Perca flavescens]
          Length = 276

 Score = 34.7 bits (79), Expect = 10.0,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
            FT  +++DV G+T G  + G   R +   L          R     G    P RV  + 
Sbjct: 210 VFTQDEMIDVIGITKGHRYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266

Query: 162 KMAGRMG 168
             AG+ G
Sbjct: 267 ARAGQKG 273


  Database: nr
    Posted date:  May 13, 2011  4:10 AM
  Number of letters in database: 999,999,932
  Number of sequences in database:  2,987,209
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 13, 2011  4:17 AM
  Number of letters in database: 999,998,956
  Number of sequences in database:  2,896,973
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 13, 2011  4:23 AM
  Number of letters in database: 999,999,979
  Number of sequences in database:  2,907,862
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 13, 2011  4:29 AM
  Number of letters in database: 999,999,513
  Number of sequences in database:  2,932,190
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 13, 2011  4:33 AM
  Number of letters in database: 792,586,372
  Number of sequences in database:  2,260,650
  
Lambda     K      H
   0.315    0.164    0.524 

Lambda     K      H
   0.267   0.0502    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,905,196,389
Number of Sequences: 13984884
Number of extensions: 246060897
Number of successful extensions: 522984
Number of sequences better than 10.0: 2749
Number of HSP's better than 10.0 without gapping: 4476
Number of HSP's successfully gapped in prelim test: 526
Number of HSP's that attempted gapping in prelim test: 507574
Number of HSP's gapped (non-prelim): 5982
length of query: 221
length of database: 4,792,584,752
effective HSP length: 134
effective length of query: 87
effective length of database: 2,918,610,296
effective search space: 253919095752
effective search space used: 253919095752
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 79 (34.7 bits)