BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780261|ref|YP_003064674.1| 50S ribosomal protein L3 [Candidatus Liberibacter asiaticus str. psy62] (221 letters) Database: nr 13,984,884 sequences; 4,792,584,752 total letters Searching..................................................done Results from round 1 >gi|254780261|ref|YP_003064674.1| 50S ribosomal protein L3 [Candidatus Liberibacter asiaticus str. psy62] gi|254039938|gb|ACT56734.1| 50S ribosomal protein L3 [Candidatus Liberibacter asiaticus str. psy62] Length = 221 Score = 447 bits (1150), Expect = e-124, Method: Compositional matrix adjust. Identities = 221/221 (100%), Positives = 221/221 (100%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN Sbjct: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF Sbjct: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV Sbjct: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS Sbjct: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 >gi|315122818|ref|YP_004063307.1| 50S ribosomal protein L3 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496220|gb|ADR52819.1| 50S ribosomal protein L3 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 221 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 188/221 (85%), Positives = 206/221 (93%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR GVVARKLGMTCVYN+EG+R+PVTVLHLDNCQVV HRTL KNGYMAVQVGAG+AK+KN Sbjct: 1 MRPGVVARKLGMTCVYNLEGKRLPVTVLHLDNCQVVAHRTLQKNGYMAVQVGAGDAKIKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKPMRGFFSSVN SPKK+L EFRVQK+D+LL +GSV SPS+F VGQLVDVTG+TIGKGF Sbjct: 61 VSKPMRGFFSSVNASPKKRLSEFRVQKEDELLQIGSVLSPSHFNVGQLVDVTGVTIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNF GLRA+HGVSISHRS GSTGCRQDPGRVFKNKKMAG MGGNR+TVKNLEV+ Sbjct: 121 AGAMKRHNFAGLRASHGVSISHRSAGSTGCRQDPGRVFKNKKMAGHMGGNRITVKNLEVI 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 S+DDKRGLI VKGCVPGAK +SWILVRDSFKSA N KGKV+ Sbjct: 181 SIDDKRGLIFVKGCVPGAKNDSWILVRDSFKSAANYKGKVA 221 >gi|86357305|ref|YP_469197.1| 50S ribosomal protein L3 [Rhizobium etli CFN 42] gi|109893545|sp|Q2K9L6|RL3_RHIEC RecName: Full=50S ribosomal protein L3 gi|86281407|gb|ABC90470.1| 50S ribosomal protein L3 [Rhizobium etli CFN 42] Length = 213 Score = 303 bits (777), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 147/213 (69%), Positives = 172/213 (80%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G +PVTVL +D CQVV RT++KNGY AVQ+GAG+AKVKN Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMDGCQVVATRTVEKNGYTAVQLGAGQAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ NV PK KL EFRV +D+LL +G+ +F GQLVDVTG TIGKGF Sbjct: 61 TSKAMRGNFAVANVEPKAKLAEFRVS-EDNLLEIGTELKADHFAAGQLVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 S D+ RGLIL+KG VPG+ K +WI+VRD+ KSA Sbjct: 180 STDEDRGLILIKGAVPGS-KGAWIIVRDAVKSA 211 >gi|222148366|ref|YP_002549323.1| 50S ribosomal protein L3 [Agrobacterium vitis S4] gi|254803647|sp|B9JVN7|RL3_AGRVS RecName: Full=50S ribosomal protein L3 gi|221735354|gb|ACM36317.1| 50S ribosomal protein L3 [Agrobacterium vitis S4] Length = 213 Score = 303 bits (777), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 148/214 (69%), Positives = 173/214 (80%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G +PVTVL LDNCQV+ RT+DK+GY AVQ+GAG+AKVKN Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHVPVTVLRLDNCQVLAQRTVDKHGYTAVQLGAGQAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F++ NV PK KL EFRV +D+L+ VGS +F GQLVDVTG TIGKGF Sbjct: 61 TSKAMRGNFAAANVEPKAKLVEFRVS-EDNLMDVGSELKAGHFEAGQLVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRATHGVS+SHRSHGSTG QDPG+V+K K+MAG MG RVT +NLEVV Sbjct: 120 AGAMKRHNFGGLRATHGVSVSHRSHGSTGSNQDPGKVWKGKRMAGHMGQTRVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 S D+ RGLILVKG VPG+ K SWI+VRD+ KSA Sbjct: 180 STDEDRGLILVKGAVPGS-KGSWIIVRDAVKSAA 212 >gi|222085675|ref|YP_002544205.1| 50S ribosomal protein L3 [Agrobacterium radiobacter K84] gi|221723123|gb|ACM26279.1| 50S ribosomal protein L3 [Agrobacterium radiobacter K84] Length = 219 Score = 303 bits (777), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 147/213 (69%), Positives = 174/213 (81%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G +PVTVL ++ CQVV RT++KNGY AVQ+GAG+AKVKN Sbjct: 7 MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMEGCQVVAQRTVEKNGYTAVQLGAGQAKVKN 66 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK +RG F+ +V PK KL EFRV DD+LL VG+ ++F+ GQLVDVTG TIGKGF Sbjct: 67 TSKALRGHFAVASVEPKAKLVEFRVS-DDNLLEVGTEIKAAHFSAGQLVDVTGTTIGKGF 125 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG RVT +NLEVV Sbjct: 126 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 185 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 S D+ RGLILVKG VPG+ K +WI+VRD+ KSA Sbjct: 186 STDEDRGLILVKGAVPGS-KGAWIIVRDAVKSA 217 >gi|190891355|ref|YP_001977897.1| 50S ribosomal protein L3 [Rhizobium etli CIAT 652] gi|226730554|sp|B3PWS1|RL3_RHIE6 RecName: Full=50S ribosomal protein L3 gi|190696634|gb|ACE90719.1| 50S ribosomal protein L3 [Rhizobium etli CIAT 652] gi|327191386|gb|EGE58412.1| 50S ribosomal protein L3 [Rhizobium etli CNPAF512] Length = 213 Score = 303 bits (776), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 147/213 (69%), Positives = 172/213 (80%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G +PVTVL +D CQVV RT++KNGY AVQ+GAG+AKVKN Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMDGCQVVATRTVEKNGYTAVQLGAGQAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ NV PK KL EFRV +D+LL +G+ +F GQLVDVTG TIGKGF Sbjct: 61 TSKAMRGNFAVANVEPKAKLAEFRVS-EDNLLEIGTELKAGHFAAGQLVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 S D+ RGLIL+KG VPG+ K +WI+VRD+ KSA Sbjct: 180 STDEDRGLILIKGAVPGS-KGAWIIVRDAVKSA 211 >gi|116251540|ref|YP_767378.1| 50S ribosomal protein L3 [Rhizobium leguminosarum bv. viciae 3841] gi|123261675|sp|Q1MIE1|RL3_RHIL3 RecName: Full=50S ribosomal protein L3 gi|115256188|emb|CAK07269.1| putative 50S ribosomal protein L3 [Rhizobium leguminosarum bv. viciae 3841] Length = 213 Score = 301 bits (772), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 147/213 (69%), Positives = 171/213 (80%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G +PVTVL ++ CQVV RT++KNGY AVQ+GAG+AKVKN Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMEGCQVVATRTVEKNGYTAVQLGAGQAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ NV PK KL EFRV +D LL VG+ +F GQLVDVTG TIGKGF Sbjct: 61 TSKAMRGNFAIANVEPKAKLTEFRVS-EDQLLEVGTEIKAGHFAAGQLVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 S D+ RGLIL+KG VPG+ K +WI+VRD+ KSA Sbjct: 180 STDEDRGLILIKGAVPGS-KGAWIIVRDAVKSA 211 >gi|209548935|ref|YP_002280852.1| 50S ribosomal protein L3 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|226730555|sp|B5ZYT5|RL3_RHILW RecName: Full=50S ribosomal protein L3 gi|209534691|gb|ACI54626.1| ribosomal protein L3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 213 Score = 301 bits (771), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 146/213 (68%), Positives = 171/213 (80%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G +PVTVL +D CQVV RT++KNGY AVQ+GAG+AKVKN Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMDGCQVVATRTVEKNGYTAVQLGAGQAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ NV PK K+ EFRV +D LL +G+ +F GQLVDVTG TIGKGF Sbjct: 61 TSKAMRGNFAVANVEPKAKVAEFRVS-EDQLLEIGTEIKAGHFAAGQLVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 S D+ RGLIL+KG VPG+ K +WI+VRD+ KSA Sbjct: 180 STDEDRGLILIKGAVPGS-KGAWIIVRDAVKSA 211 >gi|241204165|ref|YP_002975261.1| 50S ribosomal protein L3 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858055|gb|ACS55722.1| ribosomal protein L3 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 213 Score = 297 bits (761), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 144/213 (67%), Positives = 171/213 (80%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G +PVTVL ++ QVV RT++KNGY AVQ+GAG+AKVKN Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMEAVQVVATRTVEKNGYTAVQLGAGQAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ NV PK K+ EFRV +D+LL +G+ +F GQLVDVTG TIGKGF Sbjct: 61 TSKAMRGNFAIANVEPKAKVTEFRVS-EDNLLEIGTEIKAGHFAAGQLVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 S D+ RGLIL+KG VPG+ K +WI+VRD+ KSA Sbjct: 180 STDEDRGLILIKGAVPGS-KGAWIIVRDAVKSA 211 >gi|15965109|ref|NP_385462.1| 50S ribosomal protein L3 [Sinorhizobium meliloti 1021] gi|307314359|ref|ZP_07593965.1| 50S ribosomal protein L3 [Sinorhizobium meliloti BL225C] gi|307322071|ref|ZP_07601447.1| 50S ribosomal protein L3 [Sinorhizobium meliloti AK83] gi|42559675|sp|Q92QH0|RL3_RHIME RecName: Full=50S ribosomal protein L3 gi|15074289|emb|CAC45935.1| Probable 50S ribosomal protein L3 [Sinorhizobium meliloti 1021] gi|306892253|gb|EFN23063.1| 50S ribosomal protein L3 [Sinorhizobium meliloti AK83] gi|306899057|gb|EFN29699.1| 50S ribosomal protein L3 [Sinorhizobium meliloti BL225C] Length = 228 Score = 295 bits (755), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 144/212 (67%), Positives = 170/212 (80%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G IPVTVL L+NCQVV HRT +KNGY AVQ+GAG +KVKN Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHIPVTVLRLENCQVVSHRTEEKNGYTAVQLGAGRSKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 K MRG F++ +V PK KL EFRV D+ L+ +G+ + +F GQLVDVTG TIGKGF Sbjct: 61 TPKAMRGHFAAASVEPKAKLVEFRVSADN-LIDIGAELTAGHFVAGQLVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GA+KRHNFGGLRATHGVS+SHRSHGSTG QDPGRV+K K+MAG MG RVT +NLEVV Sbjct: 120 AGAIKRHNFGGLRATHGVSVSHRSHGSTGSNQDPGRVWKGKRMAGHMGQTRVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 S D+ RGLILVKG VPG+ K SWI+VRD+ KS Sbjct: 180 STDEDRGLILVKGAVPGS-KGSWIVVRDAIKS 210 >gi|150396207|ref|YP_001326674.1| 50S ribosomal protein L3 [Sinorhizobium medicae WSM419] gi|166234597|sp|A6U859|RL3_SINMW RecName: Full=50S ribosomal protein L3 gi|150027722|gb|ABR59839.1| ribosomal protein L3 [Sinorhizobium medicae WSM419] Length = 228 Score = 294 bits (753), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 144/212 (67%), Positives = 169/212 (79%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G IPVTVL L+NCQVV RT +KNGY AVQ+GAG +KVKN Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHIPVTVLRLENCQVVAQRTEEKNGYTAVQLGAGRSKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 K MRG F++ +V PK KL EFRV D+ L+ +GS + +F GQLVDVTG TIGKGF Sbjct: 61 TPKAMRGHFAAASVEPKAKLVEFRVSADN-LIDIGSELTAGHFVAGQLVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GA+KRHNFGGLRATHGVS+SHRSHGSTG QDPGRV+K K+MAG MG RVT +NLEVV Sbjct: 120 AGAIKRHNFGGLRATHGVSVSHRSHGSTGSNQDPGRVWKGKRMAGHMGQTRVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 S D+ RGLILVKG VPG+ K SWI+VRD+ KS Sbjct: 180 STDEDRGLILVKGAVPGS-KGSWIVVRDAIKS 210 >gi|227821756|ref|YP_002825726.1| 50S ribosomal protein L3 [Sinorhizobium fredii NGR234] gi|227340755|gb|ACP24973.1| 50S ribosomal protein L3 [Sinorhizobium fredii NGR234] Length = 257 Score = 291 bits (745), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 141/212 (66%), Positives = 171/212 (80%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G IPVTVL L+NCQVV RT +KNGY AVQ+GAG +KVKN Sbjct: 30 MRSGVIAQKVGMTRVYNDAGEHIPVTVLRLENCQVVAQRTEEKNGYTAVQLGAGRSKVKN 89 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +K +RG F++ +V PK K+ EFRV D+ L+ +G+ + S+F GQLVDVTG TIGKGF Sbjct: 90 TTKALRGHFAAASVEPKAKVVEFRVTADN-LIDIGAELTASHFVAGQLVDVTGTTIGKGF 148 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GA+KRHNFGGLRATHGVS+SHRSHGSTG QDPGRV+K K+MAG MG RVT +NLEVV Sbjct: 149 AGAIKRHNFGGLRATHGVSVSHRSHGSTGSNQDPGRVWKGKRMAGHMGQTRVTTQNLEVV 208 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 S D+ RGLILVKG VPG+ K +WI+VRD+ KS Sbjct: 209 STDEDRGLILVKGAVPGS-KGAWIVVRDAIKS 239 >gi|15889242|ref|NP_354923.1| 50S ribosomal protein L3 [Agrobacterium tumefaciens str. C58] gi|42559664|sp|Q8UE18|RL3_AGRT5 RecName: Full=50S ribosomal protein L3 gi|15157069|gb|AAK87708.1| 50S ribosomal protein L3 [Agrobacterium tumefaciens str. C58] Length = 213 Score = 290 bits (741), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 141/214 (65%), Positives = 170/214 (79%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G IPVTVL LDN QVV RT DKNGY AVQ+GAG++KVKN Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHIPVTVLRLDNVQVVAQRTEDKNGYTAVQLGAGQSKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +K +RG F++ NV PK KL EFRV ++ L+ +G+ + ++F GQLVDVTG TIGKGF Sbjct: 61 TTKALRGHFAAANVEPKAKLVEFRVSPEN-LIDIGATLTANHFQSGQLVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGG RA+HG S+SHR+HGSTG QDPGRV+K K+MAG MG RVT +NLEVV Sbjct: 120 AGAMKRHNFGGGRASHGNSVSHRAHGSTGNNQDPGRVWKGKRMAGHMGQTRVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 S D+ RGLILVKG VPG+ K SWI+VRD+ KSA Sbjct: 180 STDEDRGLILVKGAVPGS-KGSWIIVRDAVKSAA 212 >gi|90417763|ref|ZP_01225675.1| ribosomal protein L3 [Aurantimonas manganoxydans SI85-9A1] gi|90337435|gb|EAS51086.1| ribosomal protein L3 [Aurantimonas manganoxydans SI85-9A1] Length = 241 Score = 289 bits (740), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 140/214 (65%), Positives = 173/214 (80%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G +PVTVL ++N QVV RT +KNGY AVQVGAG AKVKN Sbjct: 1 MRSGVIAQKVGMTRVYNDVGEHVPVTVLKVENLQVVAQRTKEKNGYTAVQVGAGLAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SKPMRG F+ +V PK+KL EFRV DD+++ VG+ + +F GQ+VDVTG +IGKGF Sbjct: 61 TSKPMRGVFAQASVEPKRKLVEFRVS-DDNMIDVGAEITAEHFVPGQMVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG RVT +NL+VV Sbjct: 120 AGAMKRHNFGGLRATHGVSVSHRSHGSTGQRQDPGKVFKNKKMAGHMGDVRVTTQNLQVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 +D ++GLILV+G VPG+ K WI +RD+ K+++ Sbjct: 180 RIDPEKGLILVRGAVPGS-KGGWIEIRDAVKASL 212 >gi|325293336|ref|YP_004279200.1| 50S ribosomal protein L3 [Agrobacterium sp. H13-3] gi|325061189|gb|ADY64880.1| 50S ribosomal protein L3 [Agrobacterium sp. H13-3] Length = 213 Score = 288 bits (737), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 139/214 (64%), Positives = 170/214 (79%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G IPVTVL +DN QVV RT DKNGY AVQ+GAG++KVKN Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHIPVTVLRMDNVQVVSQRTEDKNGYTAVQLGAGQSKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +K +RG F++ NV PK KL EFRV ++ L+ +G+ + ++F GQLVDVTG TIGKGF Sbjct: 61 TTKALRGHFAAANVEPKAKLVEFRVSPEN-LIDIGATLTATHFQAGQLVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGG RA+HG S+SHR+HGSTG QDPGRV+K K+MAG MG RVT +NLEVV Sbjct: 120 AGAMKRHNFGGGRASHGNSVSHRAHGSTGNNQDPGRVWKGKRMAGHMGQTRVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 S D+ RGLILVKG VPG+ K +WI+VRD+ KSA Sbjct: 180 STDEDRGLILVKGAVPGS-KGAWIIVRDAVKSAA 212 >gi|62290144|ref|YP_221937.1| 50S ribosomal protein L3 [Brucella abortus bv. 1 str. 9-941] gi|82700067|ref|YP_414641.1| 50S ribosomal protein L3 [Brucella melitensis biovar Abortus 2308] gi|161511150|ref|NP_539674.2| 50S ribosomal protein L3 [Brucella melitensis bv. 1 str. 16M] gi|189024382|ref|YP_001935150.1| Ribosomal protein L3 [Brucella abortus S19] gi|225852730|ref|YP_002732963.1| 50S ribosomal protein L3 [Brucella melitensis ATCC 23457] gi|254689453|ref|ZP_05152707.1| 50S ribosomal protein L3 [Brucella abortus bv. 6 str. 870] gi|254693938|ref|ZP_05155766.1| 50S ribosomal protein L3 [Brucella abortus bv. 3 str. Tulya] gi|254697588|ref|ZP_05159416.1| 50S ribosomal protein L3 [Brucella abortus bv. 2 str. 86/8/59] gi|254730482|ref|ZP_05189060.1| 50S ribosomal protein L3 [Brucella abortus bv. 4 str. 292] gi|256044883|ref|ZP_05447787.1| 50S ribosomal protein L3 [Brucella melitensis bv. 1 str. Rev.1] gi|256113787|ref|ZP_05454591.1| 50S ribosomal protein L3 [Brucella melitensis bv. 3 str. Ether] gi|256257699|ref|ZP_05463235.1| 50S ribosomal protein L3 [Brucella abortus bv. 9 str. C68] gi|256263780|ref|ZP_05466312.1| ribosomal protein L3 [Brucella melitensis bv. 2 str. 63/9] gi|260546692|ref|ZP_05822431.1| ribosomal protein L3 [Brucella abortus NCTC 8038] gi|260565515|ref|ZP_05835999.1| ribosomal protein L3 [Brucella melitensis bv. 1 str. 16M] gi|260754976|ref|ZP_05867324.1| 50S ribosomal protein L3 [Brucella abortus bv. 6 str. 870] gi|260758192|ref|ZP_05870540.1| 50S ribosomal protein L3 [Brucella abortus bv. 4 str. 292] gi|260762018|ref|ZP_05874361.1| 50S ribosomal protein L3 [Brucella abortus bv. 2 str. 86/8/59] gi|260883985|ref|ZP_05895599.1| 50S ribosomal protein L3 [Brucella abortus bv. 9 str. C68] gi|261214230|ref|ZP_05928511.1| 50S ribosomal protein L3 [Brucella abortus bv. 3 str. Tulya] gi|265991310|ref|ZP_06103867.1| 50S ribosomal protein L3 [Brucella melitensis bv. 1 str. Rev.1] gi|265995147|ref|ZP_06107704.1| 50S ribosomal protein L3 [Brucella melitensis bv. 3 str. Ether] gi|297248539|ref|ZP_06932257.1| 50S ribosomal protein L3 [Brucella abortus bv. 5 str. B3196] gi|42559669|sp|Q8YHP0|RL3_BRUME RecName: Full=50S ribosomal protein L3 gi|81309408|sp|Q57CQ8|RL3_BRUAB RecName: Full=50S ribosomal protein L3 gi|109893414|sp|Q2YM03|RL3_BRUA2 RecName: Full=50S ribosomal protein L3 gi|226725140|sp|B2S679|RL3_BRUA1 RecName: Full=50S ribosomal protein L3 gi|254803659|sp|C0RJK1|RL3_BRUMB RecName: Full=50S ribosomal protein L3 gi|62196276|gb|AAX74576.1| RplC, ribosomal protein L3 [Brucella abortus bv. 1 str. 9-941] gi|82616168|emb|CAJ11211.1| Ribosomal protein L3 [Brucella melitensis biovar Abortus 2308] gi|189019954|gb|ACD72676.1| Ribosomal protein L3 [Brucella abortus S19] gi|225641095|gb|ACO01009.1| 50S ribosomal protein L3 [Brucella melitensis ATCC 23457] gi|260095742|gb|EEW79619.1| ribosomal protein L3 [Brucella abortus NCTC 8038] gi|260151583|gb|EEW86677.1| ribosomal protein L3 [Brucella melitensis bv. 1 str. 16M] gi|260668510|gb|EEX55450.1| 50S ribosomal protein L3 [Brucella abortus bv. 4 str. 292] gi|260672450|gb|EEX59271.1| 50S ribosomal protein L3 [Brucella abortus bv. 2 str. 86/8/59] gi|260675084|gb|EEX61905.1| 50S ribosomal protein L3 [Brucella abortus bv. 6 str. 870] gi|260873513|gb|EEX80582.1| 50S ribosomal protein L3 [Brucella abortus bv. 9 str. C68] gi|260915837|gb|EEX82698.1| 50S ribosomal protein L3 [Brucella abortus bv. 3 str. Tulya] gi|262766260|gb|EEZ12049.1| 50S ribosomal protein L3 [Brucella melitensis bv. 3 str. Ether] gi|263002094|gb|EEZ14669.1| 50S ribosomal protein L3 [Brucella melitensis bv. 1 str. Rev.1] gi|263093908|gb|EEZ17842.1| ribosomal protein L3 [Brucella melitensis bv. 2 str. 63/9] gi|297175708|gb|EFH35055.1| 50S ribosomal protein L3 [Brucella abortus bv. 5 str. B3196] gi|326409255|gb|ADZ66320.1| Ribosomal protein L3 [Brucella melitensis M28] gi|326538963|gb|ADZ87178.1| 50S ribosomal protein L3 [Brucella melitensis M5-90] Length = 237 Score = 279 bits (713), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 138/214 (64%), Positives = 164/214 (76%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT VYN G +PVTVL ++NC VV RT++KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ V PK KL EFRV D+LL VG + +F GQ VDVTG +IGKGF Sbjct: 61 TSKAMRGHFAKAEVEPKAKLAEFRVS-PDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 S D RGLILV+G VPG+ K +WILVRD+ K+++ Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASL 212 >gi|237815652|ref|ZP_04594649.1| 50S ribosomal protein L3 [Brucella abortus str. 2308 A] gi|17982696|gb|AAL51938.1| lsu ribosomal protein l3p [Brucella melitensis bv. 1 str. 16M] gi|237788950|gb|EEP63161.1| 50S ribosomal protein L3 [Brucella abortus str. 2308 A] Length = 245 Score = 279 bits (713), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 138/214 (64%), Positives = 164/214 (76%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT VYN G +PVTVL ++NC VV RT++KNGY AVQ+G G AKVKN Sbjct: 9 MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 68 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ V PK KL EFRV D+LL VG + +F GQ VDVTG +IGKGF Sbjct: 69 TSKAMRGHFAKAEVEPKAKLAEFRVS-PDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 127 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 128 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 187 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 S D RGLILV+G VPG+ K +WILVRD+ K+++ Sbjct: 188 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASL 220 >gi|217976767|ref|YP_002360914.1| 50S ribosomal protein L3 [Methylocella silvestris BL2] gi|254803683|sp|B8ELG3|RL3_METSB RecName: Full=50S ribosomal protein L3 gi|217502143|gb|ACK49552.1| ribosomal protein L3 [Methylocella silvestris BL2] Length = 245 Score = 279 bits (713), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 140/214 (65%), Positives = 164/214 (76%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT V+N G +PVTVL LD CQVV HRT ++NGY A+Q+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRVFNDGGEHVPVTVLKLDGCQVVAHRTKERNGYTALQLGIGRAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK RG F+ V PK KL EFRV+ + DLLPVG+ + +F VGQ VDVTG +IGKGF Sbjct: 61 VSKAERGRFAIAEVEPKLKLAEFRVE-ESDLLPVGAEITADHFVVGQFVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVS+SHRSHGSTG RQDPG+ FKNKKMAG MG RVT NL+VV Sbjct: 120 AGPMKRWNFGGLRATHGVSLSHRSHGSTGGRQDPGKTFKNKKMAGHMGAERVTTLNLKVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 +D +RGLILV+G VPG WI VRD+ K A+ Sbjct: 180 QLDIERGLILVEGAVPGV-AGGWIQVRDAIKRAL 212 >gi|148560391|ref|YP_001259153.1| 50S ribosomal protein L3 [Brucella ovis ATCC 25840] gi|161619189|ref|YP_001593076.1| 50S ribosomal protein L3 [Brucella canis ATCC 23365] gi|163843499|ref|YP_001627903.1| 50S ribosomal protein L3 [Brucella suis ATCC 23445] gi|254701974|ref|ZP_05163802.1| 50S ribosomal protein L3 [Brucella suis bv. 5 str. 513] gi|254704518|ref|ZP_05166346.1| 50S ribosomal protein L3 [Brucella suis bv. 3 str. 686] gi|254706586|ref|ZP_05168414.1| 50S ribosomal protein L3 [Brucella pinnipedialis M163/99/10] gi|254710304|ref|ZP_05172115.1| 50S ribosomal protein L3 [Brucella pinnipedialis B2/94] gi|254719291|ref|ZP_05181102.1| 50S ribosomal protein L3 [Brucella sp. 83/13] gi|256031798|ref|ZP_05445412.1| 50S ribosomal protein L3 [Brucella pinnipedialis M292/94/1] gi|256061313|ref|ZP_05451463.1| 50S ribosomal protein L3 [Brucella neotomae 5K33] gi|256369657|ref|YP_003107167.1| 50S ribosomal protein L3 [Brucella microti CCM 4915] gi|260168932|ref|ZP_05755743.1| 50S ribosomal protein L3 [Brucella sp. F5/99] gi|260566238|ref|ZP_05836708.1| ribosomal protein L3 [Brucella suis bv. 4 str. 40] gi|261314046|ref|ZP_05953243.1| 50S ribosomal protein L3 [Brucella pinnipedialis M163/99/10] gi|261317867|ref|ZP_05957064.1| 50S ribosomal protein L3 [Brucella pinnipedialis B2/94] gi|261325320|ref|ZP_05964517.1| 50S ribosomal protein L3 [Brucella neotomae 5K33] gi|261752542|ref|ZP_05996251.1| 50S ribosomal protein L3 [Brucella suis bv. 5 str. 513] gi|261755201|ref|ZP_05998910.1| 50S ribosomal protein L3 [Brucella suis bv. 3 str. 686] gi|261758425|ref|ZP_06002134.1| ribosomal protein L3 [Brucella sp. F5/99] gi|265984291|ref|ZP_06097026.1| 50S ribosomal protein L3 [Brucella sp. 83/13] gi|265988896|ref|ZP_06101453.1| 50S ribosomal protein L3 [Brucella pinnipedialis M292/94/1] gi|294852570|ref|ZP_06793243.1| 50S ribosomal protein L3 [Brucella sp. NVSL 07-0026] gi|306838043|ref|ZP_07470901.1| 50S ribosomal protein L3 [Brucella sp. NF 2653] gi|306840301|ref|ZP_07473073.1| 50S ribosomal protein L3 [Brucella sp. BO2] gi|306844137|ref|ZP_07476731.1| 50S ribosomal protein L3 [Brucella sp. BO1] gi|166233122|sp|A5VR06|RL3_BRUO2 RecName: Full=50S ribosomal protein L3 gi|189042833|sp|A9M5Q0|RL3_BRUC2 RecName: Full=50S ribosomal protein L3 gi|189042834|sp|B0CH32|RL3_BRUSI RecName: Full=50S ribosomal protein L3 gi|148371648|gb|ABQ61627.1| ribosomal protein L3 [Brucella ovis ATCC 25840] gi|161336000|gb|ABX62305.1| 50S ribosomal protein L3 [Brucella canis ATCC 23365] gi|163674222|gb|ABY38333.1| 50S ribosomal protein L3 [Brucella suis ATCC 23445] gi|255999819|gb|ACU48218.1| 50S ribosomal protein L3 [Brucella microti CCM 4915] gi|260155756|gb|EEW90836.1| ribosomal protein L3 [Brucella suis bv. 4 str. 40] gi|261297090|gb|EEY00587.1| 50S ribosomal protein L3 [Brucella pinnipedialis B2/94] gi|261301300|gb|EEY04797.1| 50S ribosomal protein L3 [Brucella neotomae 5K33] gi|261303072|gb|EEY06569.1| 50S ribosomal protein L3 [Brucella pinnipedialis M163/99/10] gi|261738409|gb|EEY26405.1| ribosomal protein L3 [Brucella sp. F5/99] gi|261742295|gb|EEY30221.1| 50S ribosomal protein L3 [Brucella suis bv. 5 str. 513] gi|261744954|gb|EEY32880.1| 50S ribosomal protein L3 [Brucella suis bv. 3 str. 686] gi|264661093|gb|EEZ31354.1| 50S ribosomal protein L3 [Brucella pinnipedialis M292/94/1] gi|264662883|gb|EEZ33144.1| 50S ribosomal protein L3 [Brucella sp. 83/13] gi|294821159|gb|EFG38158.1| 50S ribosomal protein L3 [Brucella sp. NVSL 07-0026] gi|306275580|gb|EFM57312.1| 50S ribosomal protein L3 [Brucella sp. BO1] gi|306289700|gb|EFM60889.1| 50S ribosomal protein L3 [Brucella sp. BO2] gi|306406967|gb|EFM63188.1| 50S ribosomal protein L3 [Brucella sp. NF 2653] Length = 237 Score = 279 bits (713), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 138/214 (64%), Positives = 164/214 (76%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT VYN G +PVTVL ++NC VV RT++KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ V PK KL EFRV D+LL VG + +F GQ VDVTG +IGKGF Sbjct: 61 TSKAMRGHFAKAEVEPKAKLAEFRVS-PDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 S D RGLILV+G VPG+ K +WILVRD+ K+++ Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASL 212 >gi|225627703|ref|ZP_03785740.1| 50S ribosomal protein L3 [Brucella ceti str. Cudo] gi|225617708|gb|EEH14753.1| 50S ribosomal protein L3 [Brucella ceti str. Cudo] Length = 245 Score = 279 bits (713), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 138/214 (64%), Positives = 164/214 (76%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT VYN G +PVTVL ++NC VV RT++KNGY AVQ+G G AKVKN Sbjct: 9 MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 68 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ V PK KL EFRV D+LL VG + +F GQ VDVTG +IGKGF Sbjct: 69 TSKAMRGHFAKAEVEPKAKLAEFRVS-PDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 127 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 128 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 187 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 S D RGLILV+G VPG+ K +WILVRD+ K+++ Sbjct: 188 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASL 220 >gi|23502110|ref|NP_698237.1| 50S ribosomal protein L3 [Brucella suis 1330] gi|42559647|sp|Q8G076|RL3_BRUSU RecName: Full=50S ribosomal protein L3 gi|23348070|gb|AAN30152.1| ribosomal protein L3 [Brucella suis 1330] Length = 237 Score = 278 bits (712), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 138/214 (64%), Positives = 164/214 (76%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT VYN G +PVTVL ++NC VV RT++KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGVAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ V PK KL EFRV D+LL VG + +F GQ VDVTG +IGKGF Sbjct: 61 TSKAMRGHFAKAEVEPKAKLAEFRVS-PDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 S D RGLILV+G VPG+ K +WILVRD+ K+++ Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASL 212 >gi|254714301|ref|ZP_05176112.1| 50S ribosomal protein L3 [Brucella ceti M644/93/1] gi|254717738|ref|ZP_05179549.1| 50S ribosomal protein L3 [Brucella ceti M13/05/1] gi|261219581|ref|ZP_05933862.1| 50S ribosomal protein L3 [Brucella ceti M13/05/1] gi|261322076|ref|ZP_05961273.1| 50S ribosomal protein L3 [Brucella ceti M644/93/1] gi|260924670|gb|EEX91238.1| 50S ribosomal protein L3 [Brucella ceti M13/05/1] gi|261294766|gb|EEX98262.1| 50S ribosomal protein L3 [Brucella ceti M644/93/1] Length = 237 Score = 278 bits (712), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 137/214 (64%), Positives = 164/214 (76%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT VYN G +PVT+L ++NC VV RT++KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRVYNDAGEHVPVTILRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ V PK KL EFRV D+LL VG + +F GQ VDVTG +IGKGF Sbjct: 61 TSKAMRGHFAKAEVEPKAKLAEFRVS-PDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 S D RGLILV+G VPG+ K +WILVRD+ K+++ Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASL 212 >gi|260432429|ref|ZP_05786400.1| 50S ribosomal protein L3 [Silicibacter lacuscaerulensis ITI-1157] gi|260416257|gb|EEX09516.1| 50S ribosomal protein L3 [Silicibacter lacuscaerulensis ITI-1157] Length = 242 Score = 277 bits (708), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 134/211 (63%), Positives = 164/211 (77%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ +GR+IPVTVLHLDN QVV RT DK+GY AVQ+GAG AK K Sbjct: 2 MRSGIIAKKVGMTRLFMEDGRQIPVTVLHLDNLQVVAQRTADKDGYTAVQLGAGAAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F++ V PK+KL EFRV +D L+ VG+ S +F GQ VDV+G +IGKGF Sbjct: 62 TSKAMRGHFAAAKVEPKRKLAEFRVS-EDALIEVGAEISADHFVEGQKVDVSGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGL+ +KG VPG K+ W+ V+D+ K Sbjct: 181 KTDAERGLVFIKGAVPG-PKSGWVTVKDAVK 210 >gi|114704484|ref|ZP_01437392.1| 50S ribosomal protein L3 [Fulvimarina pelagi HTCC2506] gi|114539269|gb|EAU42389.1| 50S ribosomal protein L3 [Fulvimarina pelagi HTCC2506] Length = 241 Score = 277 bits (708), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 133/214 (62%), Positives = 167/214 (78%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT +Y G +PVTVL ++N QVV RT DKNGY AVQVGAG AKVKN Sbjct: 1 MRSGVIAQKVGMTRIYTDAGEHVPVTVLKVENLQVVGQRTQDKNGYTAVQVGAGLAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ V PK+KL EFRV +D+++ +G+ + +F GQ+VDVTG +IGKGF Sbjct: 61 TSKAMRGVFAQAKVEPKRKLVEFRV-TEDNMIDIGAEITADHFVEGQMVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGG+RATHGVSISHR+HGSTG QDPG+VFK KKMAG MG RVT +NL++V Sbjct: 120 AGAMKRHNFGGMRATHGVSISHRAHGSTGQNQDPGKVFKGKKMAGHMGQERVTTQNLQIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D ++GLILV+G VPGA K WI +RD+ K+++ Sbjct: 180 RTDAEKGLILVRGAVPGA-KGGWIEIRDAVKASL 212 >gi|256159968|ref|ZP_05457686.1| 50S ribosomal protein L3 [Brucella ceti M490/95/1] gi|256255199|ref|ZP_05460735.1| 50S ribosomal protein L3 [Brucella ceti B1/94] gi|261222395|ref|ZP_05936676.1| 50S ribosomal protein L3 [Brucella ceti B1/94] gi|265998360|ref|ZP_06110917.1| 50S ribosomal protein L3 [Brucella ceti M490/95/1] gi|260920979|gb|EEX87632.1| 50S ribosomal protein L3 [Brucella ceti B1/94] gi|262552828|gb|EEZ08818.1| 50S ribosomal protein L3 [Brucella ceti M490/95/1] Length = 237 Score = 277 bits (708), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 137/214 (64%), Positives = 163/214 (76%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT VYN G +PVTVL ++NC VV RT++KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ V PK KL EFRV D+LL VG + +F GQ VDVTG +IGKGF Sbjct: 61 TSKAMRGHFAKAEVEPKAKLAEFRVS-PDNLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG A+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 120 AGVMKRHNFGGHHASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 S D RGLILV+G VPG+ K +WILVRD+ K+++ Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASL 212 >gi|110634030|ref|YP_674238.1| 50S ribosomal protein L3 [Mesorhizobium sp. BNC1] gi|122965958|sp|Q11HQ2|RL3_MESSB RecName: Full=50S ribosomal protein L3 gi|110285014|gb|ABG63073.1| LSU ribosomal protein L3P [Chelativorans sp. BNC1] Length = 242 Score = 276 bits (706), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 137/214 (64%), Positives = 166/214 (77%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G IPVTVL ++NCQVV RT +KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKIGMTRVYNETGEHIPVTVLRMENCQVVAQRTEEKNGYTAVQLGVGLAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK +RG F++ +V PK K+ EFRV ++LL VG+ + +F GQ VDVTG +IGKGF Sbjct: 61 TSKALRGHFAAASVEPKAKVAEFRVS-PENLLDVGAEITADHFVPGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G MKRHNFGG RATHG S+SHR+HGSTG RQDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 120 QGVMKRHNFGGGRATHGNSVSHRTHGSTGQRQDPGKVFKGKKMAGHMGDRRVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 S D +RGLILV+G VPG+ K SWI+VRD+ K+ + Sbjct: 180 STDTERGLILVRGAVPGS-KGSWIMVRDAVKAPL 212 >gi|296447530|ref|ZP_06889452.1| 50S ribosomal protein L3 [Methylosinus trichosporium OB3b] gi|296254918|gb|EFH02023.1| 50S ribosomal protein L3 [Methylosinus trichosporium OB3b] Length = 237 Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 137/217 (63%), Positives = 165/217 (76%), Gaps = 2/217 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G +PVTVL LD CQVV HRT+++NGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKVGMTRVFTEAGEHVPVTVLKLDGCQVVAHRTMEQNGYTAVQLGIGRAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK RG F+ V PK KL EFRV + +LLPVG+ + +F VGQ VDVTG ++GKGF Sbjct: 61 VSKAERGRFAIAKVEPKLKLAEFRV-AESELLPVGAEITADHFVVGQFVDVTGTSLGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPG+ FKNKKMAG MG +RVT +NL VV Sbjct: 120 AGAMKRWNFGGLRATHGVSVSHRSHGSTGGRQDPGKTFKNKKMAGHMGVDRVTTQNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 D +RGL+LV+G VPG WI VRD+ K A+ + Sbjct: 180 QTDVERGLLLVEGSVPG-HAGGWIFVRDAVKRALPAE 215 >gi|163760799|ref|ZP_02167878.1| 50S ribosomal protein L3 [Hoeflea phototrophica DFL-43] gi|162281843|gb|EDQ32135.1| 50S ribosomal protein L3 [Hoeflea phototrophica DFL-43] Length = 223 Score = 276 bits (705), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 136/203 (66%), Positives = 158/203 (77%), Gaps = 2/203 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT VYN G +PVTVL L+NCQVV RT +KNGY AVQ+GAG AKVKN SK MRG F+ Sbjct: 1 MTRVYNDAGEHVPVTVLRLENCQVVAQRTEEKNGYTAVQLGAGVAKVKNTSKAMRGNFAI 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 NV PK KL EFRV D+L+ VG+ S S+F GQLVDV+G+T GKGF+GAMKRH FGG Sbjct: 61 ANVEPKAKLVEFRVS-SDNLIDVGAEISASHFVAGQLVDVSGVTQGKGFAGAMKRHGFGG 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 LRATHGVS+SHRSHGSTG QDPG+V+K KKMAG MG RVT +NLE+VS D RGLIL+ Sbjct: 120 LRATHGVSVSHRSHGSTGSNQDPGKVWKGKKMAGHMGQTRVTTQNLEIVSTDADRGLILI 179 Query: 192 KGCVPGAKKNSWILVRDSFKSAV 214 KG VPG+ K SWI+VRD+ KS + Sbjct: 180 KGAVPGS-KGSWIVVRDAIKSGI 201 >gi|239832122|ref|ZP_04680451.1| 50S ribosomal protein L3 [Ochrobactrum intermedium LMG 3301] gi|239824389|gb|EEQ95957.1| 50S ribosomal protein L3 [Ochrobactrum intermedium LMG 3301] Length = 246 Score = 276 bits (705), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 135/211 (63%), Positives = 162/211 (76%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT VYN G +PVTVL ++NC VV RT++KNGY AVQ+G G AKVKN Sbjct: 9 MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGIAKVKN 68 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ V PK K+ EFRV D+LL VG+ + +F GQ VDVTG +IGKGF Sbjct: 69 TSKAMRGHFAKAEVEPKAKVAEFRVS-PDNLLEVGAEITAEHFVAGQKVDVTGTSIGKGF 127 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HR+HGSTG RQDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 128 AGVMKRHNFGGHRASHGNSITHRAHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 187 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 S D RGLILV+G VPG+ K +WI+VRD+ K Sbjct: 188 STDSDRGLILVRGAVPGS-KGAWIIVRDAVK 217 >gi|304391453|ref|ZP_07373395.1| 50S ribosomal protein L3 [Ahrensia sp. R2A130] gi|303295682|gb|EFL90040.1| 50S ribosomal protein L3 [Ahrensia sp. R2A130] Length = 277 Score = 275 bits (702), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 134/215 (62%), Positives = 170/215 (79%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT +Y EG +PVTVL +++ QV+ RT +K+GY AVQ+GAG+AKVKN Sbjct: 1 MRSGVIAQKVGMTRIYTDEGINVPVTVLRMEHVQVIAQRTEEKHGYTAVQLGAGKAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKPMRG F+ V PK+KL EFRV +++L+PVG+ +++ GQ VDVTG TIGKGF Sbjct: 61 VSKPMRGHFAVAKVEPKRKLAEFRVT-EENLVPVGAEIIAAHYMPGQFVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVS+SHRSHGSTG QDPG+VFK K+MAG MG RVT +N++VV Sbjct: 120 AGAMKRHNFGGLRASHGVSVSHRSHGSTGQCQDPGKVFKGKRMAGHMGNTRVTTQNIQVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 SVD RGL+LVKG VPG K W+ +RD+ K V+ Sbjct: 180 SVDVDRGLVLVKGAVPGP-KGGWVTLRDAIKKPVH 213 >gi|153009286|ref|YP_001370501.1| 50S ribosomal protein L3 [Ochrobactrum anthropi ATCC 49188] gi|166233170|sp|A6X0B8|RL3_OCHA4 RecName: Full=50S ribosomal protein L3 gi|151561174|gb|ABS14672.1| ribosomal protein L3 [Ochrobactrum anthropi ATCC 49188] Length = 238 Score = 274 bits (700), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 134/211 (63%), Positives = 161/211 (76%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT VYN G +PVTVL ++NC VV RT++KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGLAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ V PK K+ EFRV D+LL VG+ + +F GQ VDVTG +IGKGF Sbjct: 61 TSKAMRGHFAKAEVEPKAKVAEFRVS-PDNLLEVGAEITAEHFVAGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNF G RA+HG SI+HR+HGSTG RQDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 120 AGVMKRHNFAGHRASHGNSITHRAHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 S D RGLILV+G VPG+ K +WI+VRD+ K Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWIIVRDAVK 209 >gi|126739691|ref|ZP_01755383.1| 50S ribosomal protein L3 [Roseobacter sp. SK209-2-6] gi|126719337|gb|EBA16047.1| 50S ribosomal protein L3 [Roseobacter sp. SK209-2-6] Length = 234 Score = 273 bits (698), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 135/211 (63%), Positives = 164/211 (77%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ +G++IPVTVLHLD QVV RT DK+GY AVQ+GAG AKVK Sbjct: 1 MRSGIIAKKVGMTRLFMEDGQQIPVTVLHLDGLQVVSQRTEDKDGYTAVQLGAGSAKVKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK MRG F++ V PK+KL EFRV D L+ VG+ S +F GQ VDVTG +IGKGF Sbjct: 61 VSKAMRGHFAASKVEPKRKLVEFRVPADA-LIEVGAEISAEHFLEGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGL+ +KG VPG K+ W+ V+D+ K Sbjct: 180 KTDAERGLVFIKGAVPGP-KSGWVTVKDAVK 209 >gi|85709057|ref|ZP_01040123.1| 50S ribosomal protein L3 [Erythrobacter sp. NAP1] gi|85690591|gb|EAQ30594.1| 50S ribosomal protein L3 [Erythrobacter sp. NAP1] Length = 273 Score = 273 bits (697), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 132/211 (62%), Positives = 162/211 (76%), Gaps = 1/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR +PVTVL L++CQVV HRT D +GY AVQ+GAGEAK KN Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHVPVTVLALEDCQVVSHRTADNDGYFAVQLGAGEAKQKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP R F V K+++ EFRV+ ++ L+PVGS+ S +F GQ VD+TG T GKGF Sbjct: 61 VAKPQREHFGKAGVGLKQRVAEFRVENEEGLVPVGSLISADHFVAGQKVDITGHTQGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR FGGLRATHGVSISHRSHGSTG RQDPGRVFK KKMAG MG + T NLEVV Sbjct: 121 AGAMKRWGFGGLRATHGVSISHRSHGSTGNRQDPGRVFKGKKMAGHMGDRQRTQMNLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RGL+ +KG VPG+ KN W+LVRD+ K Sbjct: 181 RTDADRGLLFIKGSVPGS-KNGWLLVRDAIK 210 >gi|56698636|ref|YP_169013.1| 50S ribosomal protein L3 [Ruegeria pomeroyi DSS-3] gi|81819888|sp|Q5LLU6|RL3_SILPO RecName: Full=50S ribosomal protein L3 gi|56680373|gb|AAV97039.1| ribosomal protein L3 [Ruegeria pomeroyi DSS-3] Length = 241 Score = 273 bits (697), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 132/211 (62%), Positives = 164/211 (77%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ +G++IPVTVL LDN QVV RT +K+GY AVQ+GAG K+K Sbjct: 1 MRSGIIAKKVGMTRLFMEDGKQIPVTVLQLDNLQVVAQRTTEKDGYTAVQLGAGTPKIKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK MRG F++ V PK+KL EFRV +D L+ VG+ S +F GQ VDV+G +IGKGF Sbjct: 61 VSKAMRGHFAAQKVEPKRKLAEFRVS-EDALIEVGAEISAEHFLTGQKVDVSGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPGRVFK KKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGRVFKGKKMAGHMGAARVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGL+ +KG VPG K+ W+ V+D+ K Sbjct: 180 KTDAERGLVFIKGAVPGP-KSGWVTVKDAVK 209 >gi|288957422|ref|YP_003447763.1| large subunit ribosomal protein L3 [Azospirillum sp. B510] gi|288909730|dbj|BAI71219.1| large subunit ribosomal protein L3 [Azospirillum sp. B510] Length = 236 Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 134/211 (63%), Positives = 168/211 (79%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT V+ +G+ +PVTVL +D+CQVV RT +K+GY AVQ+GAG KVKN Sbjct: 1 MRSGLIAQKVGMTRVFTDDGQHVPVTVLKVDSCQVVAVRTEEKDGYTAVQLGAGAIKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP RG F+ V PK+KL EFRV D L+ VG+ S ++F GQ VDVTG +IGKGF Sbjct: 61 VNKPERGHFAKARVEPKRKLVEFRVDADA-LIEVGAELSVTHFVAGQYVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG +G RVTV NL+VV Sbjct: 120 AGAMKRWNFGGLRATHGVSVSHRSHGSTGNRQDPGKVFKNKKMAGHLGDERVTVLNLQVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +VD+ RGLI++KG VPGA + W+ +RD+ K Sbjct: 180 AVDEARGLIMLKGAVPGA-EGGWLRIRDAVK 209 >gi|254466883|ref|ZP_05080294.1| ribosomal protein L3 [Rhodobacterales bacterium Y4I] gi|206687791|gb|EDZ48273.1| ribosomal protein L3 [Rhodobacterales bacterium Y4I] Length = 234 Score = 272 bits (696), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 132/211 (62%), Positives = 162/211 (76%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ +G++IPVTVLHLD QVV RT DK+GY AVQ+GAG AK K Sbjct: 1 MRSGIIAKKVGMTRLFMEDGKQIPVTVLHLDGLQVVAQRTEDKDGYTAVQLGAGTAKAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ MRG F++ V PK+KL EFRV D L+ VG+ S +F GQ VDVTG +IGKGF Sbjct: 61 TSQAMRGHFAAAKVEPKRKLVEFRVPADA-LIEVGAEISAEHFLAGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGL+ +KG VPG K+ W+ V+D+ K Sbjct: 180 KTDAERGLVFIKGAVPG-PKSGWVTVKDAVK 209 >gi|149184311|ref|ZP_01862629.1| 50S ribosomal protein L3 [Erythrobacter sp. SD-21] gi|148831631|gb|EDL50064.1| 50S ribosomal protein L3 [Erythrobacter sp. SD-21] Length = 285 Score = 272 bits (695), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 131/211 (62%), Positives = 161/211 (76%), Gaps = 1/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR +PVTVL L++CQV HRT D++GY VQVG+GEAK KN Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHVPVTVLSLEDCQVTAHRTEDRDGYYGVQVGSGEAKQKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP R F+ V+ K K+ EFRV ++ LLPVG+ S +F GQ VD+TG T GKGF Sbjct: 61 VNKPQREAFAKAEVALKMKVGEFRVDSEEALLPVGARISAEHFVAGQKVDITGHTQGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR FGGLRATHGVSISHRSHGSTG RQDPGRVFK KKMAG MG + T +NLE+V Sbjct: 121 AGAMKRWGFGGLRATHGVSISHRSHGSTGNRQDPGRVFKGKKMAGHMGDRQRTQQNLEIV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RGL+ VKG VPGA KN W++VRD+ K Sbjct: 181 RTDADRGLLFVKGSVPGA-KNGWLMVRDAVK 210 >gi|87199270|ref|YP_496527.1| 50S ribosomal protein L3 [Novosphingobium aromaticivorans DSM 12444] gi|109893532|sp|Q2G8Y0|RL3_NOVAD RecName: Full=50S ribosomal protein L3 gi|87134951|gb|ABD25693.1| LSU ribosomal protein L3P [Novosphingobium aromaticivorans DSM 12444] Length = 251 Score = 272 bits (695), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 134/211 (63%), Positives = 165/211 (78%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR +PVTVL L+NCQVV RT +++GY+A+Q+GAGEAK KN Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHVPVTVLSLENCQVVSVRTAERDGYVALQLGAGEAKQKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP R F+ V K ++ EFRV DD LL VGS + S+F GQ VD+TG T GKGF Sbjct: 61 VAKPQREHFAKAEVPLKMEVAEFRV-ADDALLDVGSTIAASHFVPGQYVDITGQTQGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GAMKR FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG + T +NLEVV Sbjct: 120 QGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRQRTQQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 DD+RGLI VKG VPG+ KN+W+LVRD+ K Sbjct: 180 RTDDERGLIFVKGSVPGS-KNAWLLVRDAVK 209 >gi|85374465|ref|YP_458527.1| 50S ribosomal protein L3 [Erythrobacter litoralis HTCC2594] gi|123293706|sp|Q2N9B1|RL3_ERYLH RecName: Full=50S ribosomal protein L3 gi|84787548|gb|ABC63730.1| ribosomal protein L3 [Erythrobacter litoralis HTCC2594] Length = 289 Score = 272 bits (695), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 132/211 (62%), Positives = 162/211 (76%), Gaps = 1/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR +PVTVL L++CQVV RT +++GY A+QVG+G AK KN Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHVPVTVLALEDCQVVSQRTQERDGYFALQVGSGVAKQKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP R F+ V K K+ EFRV+ +D LLPVG+ S +F GQ VD+TG T GKGF Sbjct: 61 VAKPQREAFAKAEVGLKMKVAEFRVEGEDGLLPVGAAISAEHFIAGQKVDITGYTQGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR FGGLRATHGVSISHRSHGSTG RQDPGRVFK KKMAG MG + T +NLEVV Sbjct: 121 AGAMKRWGFGGLRATHGVSISHRSHGSTGNRQDPGRVFKGKKMAGHMGDRQRTQQNLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGLI VKG VPG KNSW+L+RD+ K Sbjct: 181 RTDPERGLIFVKGSVPGT-KNSWMLIRDAVK 210 >gi|13470551|ref|NP_102120.1| 50S ribosomal protein L3 [Mesorhizobium loti MAFF303099] gi|42559683|sp|Q98N57|RL3_RHILO RecName: Full=50S ribosomal protein L3 gi|14021293|dbj|BAB47906.1| 50S ribosomal protein L3 [Mesorhizobium loti MAFF303099] Length = 237 Score = 271 bits (694), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 131/214 (61%), Positives = 164/214 (76%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT +YN G +PVTVL ++NCQVV RT +KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAKKVGMTRIYNDAGEHVPVTVLQMENCQVVAQRTQEKNGYTAVQLGVGLAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F++ +V PK K+ EFRV D+ ++ VG+ + +F GQ VDVTG TIGKGF Sbjct: 61 TSKAMRGHFATASVEPKAKVAEFRVSADN-MIDVGAEITVEHFVAGQKVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH+ GG RATHG S+SHR+HGSTG RQDPG+VFK KKMAG MG RVT +N+E+V Sbjct: 120 QGVIKRHHMGGGRATHGNSVSHRTHGSTGQRQDPGKVFKGKKMAGHMGDTRVTTQNVEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 S D RGLIL++G VPG+ K +WILVRD+ K A+ Sbjct: 180 STDADRGLILIRGAVPGS-KGAWILVRDAAKVAL 212 >gi|326388197|ref|ZP_08209800.1| 50S ribosomal protein L3 [Novosphingobium nitrogenifigens DSM 19370] gi|326207363|gb|EGD58177.1| 50S ribosomal protein L3 [Novosphingobium nitrogenifigens DSM 19370] Length = 241 Score = 271 bits (694), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 132/211 (62%), Positives = 166/211 (78%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR +PVTVL L++CQVV RT +++GY+A+Q+GAGEAK KN Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHVPVTVLSLEDCQVVSVRTAERDGYVALQLGAGEAKQKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP R F+ V K ++ EFRV DD +L VGS + S+F +GQLVD+TG T GKGF Sbjct: 61 VAKPQREHFAKAEVPLKAEVAEFRV-ADDAVLEVGSTIAASHFAIGQLVDITGHTQGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG + T +NLE+V Sbjct: 120 AGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRQRTQQNLEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 DD RGLI VKG VPG+ KN W+LVRD+ K Sbjct: 180 RTDDARGLIFVKGSVPGS-KNGWLLVRDAVK 209 >gi|296282582|ref|ZP_06860580.1| 50S ribosomal protein L3 [Citromicrobium bathyomarinum JL354] Length = 278 Score = 271 bits (693), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 131/211 (62%), Positives = 162/211 (76%), Gaps = 1/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR +PVTVL L+ CQV +RT D++GY +VQVG+GEAK KN Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHVPVTVLALEGCQVTANRTADRDGYWSVQVGSGEAKQKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP R F+ V K K+ EFRV+ +D LLPVG+ + +F GQ VDV G T GKGF Sbjct: 61 VNKPQREAFAKAEVGLKMKVAEFRVEGEDALLPVGATITADHFIAGQKVDVQGYTQGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR FGGLRATHGVS+SHRSHGSTG RQDPGRVFKNKKMAG MG + T +NLE+V Sbjct: 121 AGAMKRWGFGGLRATHGVSLSHRSHGSTGNRQDPGRVFKNKKMAGHMGDRQRTQQNLEIV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGL+ VKG VPGA KNSW+LV D+ K Sbjct: 181 RTDSERGLLFVKGSVPGA-KNSWMLVADAVK 210 >gi|182678337|ref|YP_001832483.1| 50S ribosomal protein L3 [Beijerinckia indica subsp. indica ATCC 9039] gi|226725134|sp|B2IK62|RL3_BEII9 RecName: Full=50S ribosomal protein L3 gi|182634220|gb|ACB94994.1| ribosomal protein L3 [Beijerinckia indica subsp. indica ATCC 9039] Length = 240 Score = 270 bits (691), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 139/211 (65%), Positives = 158/211 (74%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT V+ G IPVTVL LD CQVV HRT ++NGY+AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRVFTDAGEHIPVTVLKLDGCQVVGHRTKEQNGYVAVQLGIGRAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK RG F+ V PK KL EFRV D LLP+G+ + +F VGQ VDVTG + GKGF Sbjct: 61 VSKAERGRFAVAKVEPKLKLAEFRVD-DATLLPIGAEITADHFVVGQFVDVTGTSTGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRATHGVSISHRSHGSTG RQDPG+ FKNKKMAG +G RVT NL VV Sbjct: 120 AGAMKRWNFGGLRATHGVSISHRSHGSTGGRQDPGKTFKNKKMAGHLGTERVTTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGLILV+G VPG WI VRD+ K Sbjct: 180 QTDVERGLILVEGAVPGT-AGGWIYVRDAVK 209 >gi|294085958|ref|YP_003552718.1| 50S ribosomal protein L3 [Candidatus Puniceispirillum marinum IMCC1322] gi|292665533|gb|ADE40634.1| 50S ribosomal protein L3 [Candidatus Puniceispirillum marinum IMCC1322] Length = 275 Score = 269 bits (688), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 134/212 (63%), Positives = 160/212 (75%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++ARKLGMT V+N G +PVTVL +D+ QVV R +GY AVQ+GAG AK KN Sbjct: 1 MRSGIIARKLGMTRVFNEAGHHVPVTVLKMDDVQVVSVRNKQVDGYTAVQLGAGMAKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKPMRG F+ NV PK KL EFRV DD +L VG+ PS+F GQ VDV G T GKGF Sbjct: 61 VSKPMRGHFAKANVLPKSKLVEFRVS-DDAVLDVGATLVPSHFVAGQKVDVVGTTQGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNF GLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG R T +N+EVV Sbjct: 120 AGAMKRHNFAGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRNTTQNIEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +VDD+ G++L+ G VPG KN W+L+ D+ K+ Sbjct: 180 AVDDEEGVVLLCGAVPG-PKNGWVLISDAIKA 210 >gi|323136086|ref|ZP_08071169.1| 50S ribosomal protein L3 [Methylocystis sp. ATCC 49242] gi|322399177|gb|EFY01696.1| 50S ribosomal protein L3 [Methylocystis sp. ATCC 49242] Length = 240 Score = 268 bits (686), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 135/214 (63%), Positives = 159/214 (74%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G +PVTVL LD CQVV RT +KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKVGMTRVFTEAGEHVPVTVLKLDGCQVVAQRTKEKNGYTAVQLGIGRAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK R F++ V PK KL EFRV +++LLPVG+ + +F VGQ VDVTG T GKGF Sbjct: 61 VSKAERTRFAAAKVEPKMKLAEFRVN-EEELLPVGAEITADHFVVGQFVDVTGTTTGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR FGGLRA+HGVSISHRSHGSTG RQDPG+ FKNKKMAG MG RVT +NL VV Sbjct: 120 AGPMKRWGFGGLRASHGVSISHRSHGSTGGRQDPGKTFKNKKMAGHMGVERVTTQNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D +RGL+LV+G VPG WI VRD+ K A+ Sbjct: 180 QTDVERGLVLVEGAVPGT-AGGWIFVRDAVKRAL 212 >gi|114764144|ref|ZP_01443382.1| 50S ribosomal protein L3 [Pelagibaca bermudensis HTCC2601] gi|114543296|gb|EAU46312.1| 50S ribosomal protein L3 [Roseovarius sp. HTCC2601] Length = 280 Score = 268 bits (686), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 131/211 (62%), Positives = 163/211 (77%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT ++ +G+++PVTVL LD CQVV RT DK+GY AVQ+GAG K KN Sbjct: 2 MRSGVIAKKVGMTRLFLEDGKQVPVTVLQLDGCQVVAQRTSDKDGYTAVQLGAGSVKAKN 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKPMRG F+ V PK+K+ EFRV ++ L+ VG + ++ GQ VDV+G TIGKGF Sbjct: 62 VSKPMRGHFAIAKVEPKRKIAEFRVDAEN-LIGVGEEITADHYFEGQFVDVSGTTIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RGLI++KG VPG+ K W+ ++D+ K Sbjct: 181 KTDASRGLIMIKGAVPGS-KGGWVTIKDAVK 210 >gi|319783320|ref|YP_004142796.1| 50S ribosomal protein L3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169208|gb|ADV12746.1| 50S ribosomal protein L3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 242 Score = 268 bits (686), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 130/214 (60%), Positives = 163/214 (76%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT +YN G +PVTVL ++NCQVV RT +KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAKKVGMTRIYNDAGEHVPVTVLLMENCQVVAQRTQEKNGYTAVQLGVGLAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F++ +V PK K+ EFRV D+ ++ VG+ + +F GQ VDVTG TIGKGF Sbjct: 61 TSKAMRGHFATASVEPKAKVAEFRVSADN-MIDVGAEITVEHFVAGQKVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH+ GG RATHG S+SHR+HGSTG RQDPG+VFK K MAG MG RVT +N+E+V Sbjct: 120 QGVIKRHHMGGGRATHGNSVSHRTHGSTGQRQDPGKVFKGKHMAGHMGDTRVTTQNVEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 S D RGLIL++G VPG+ K +WILVRD+ K A+ Sbjct: 180 STDADRGLILIRGAVPGS-KGAWILVRDAAKVAL 212 >gi|298291438|ref|YP_003693377.1| 50S ribosomal protein L3 [Starkeya novella DSM 506] gi|296927949|gb|ADH88758.1| 50S ribosomal protein L3 [Starkeya novella DSM 506] Length = 251 Score = 268 bits (686), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 129/211 (61%), Positives = 163/211 (77%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT ++N G +PVTVL +DNCQVV HRT++KNGY AVQ+G G+AK +N Sbjct: 1 MRSGVIAQKVGMTRIFNDAGEHVPVTVLKVDNCQVVAHRTVEKNGYTAVQLGVGQAKPQN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++ +RG F+ V PK+K+ EFRV+ + DL+PVG+ + +F VGQ VDVTG +IGKGF Sbjct: 61 TTRALRGHFAVAKVEPKRKMAEFRVE-ESDLIPVGAELTVDHFVVGQFVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G VT +NL+VV Sbjct: 120 AGGMKRHNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGAETVTTQNLKVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGLI V+G VPG K WI+V D+ K Sbjct: 180 LTDVERGLIAVEGAVPG-NKGGWIIVADAVK 209 >gi|260468554|ref|ZP_05813721.1| ribosomal protein L3 [Mesorhizobium opportunistum WSM2075] gi|259028710|gb|EEW30019.1| ribosomal protein L3 [Mesorhizobium opportunistum WSM2075] Length = 237 Score = 268 bits (685), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 129/214 (60%), Positives = 163/214 (76%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT +YN G +PVTVL ++NCQVV RT +KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAKKVGMTRIYNDAGEHVPVTVLQMENCQVVAQRTQEKNGYTAVQLGVGLAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK +RG F++ +V PK K+ EFRV D+ ++ VG+ + +F GQ VDVTG TIGKGF Sbjct: 61 TSKALRGHFATASVEPKAKVAEFRVSADN-MIDVGAEITVEHFVAGQKVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH+ GG RATHG S+SHR+HGSTG RQDPG+VFK K MAG MG RVT +N+E+V Sbjct: 120 QGVIKRHHMGGGRATHGNSVSHRTHGSTGQRQDPGKVFKGKHMAGHMGDTRVTTQNVEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 S D RGLIL++G VPG+ K +WILVRD+ K A+ Sbjct: 180 STDADRGLILIRGAVPGS-KGAWILVRDAAKVAL 212 >gi|188581375|ref|YP_001924820.1| 50S ribosomal protein L3 [Methylobacterium populi BJ001] gi|226730534|sp|B1ZLK4|RL3_METPB RecName: Full=50S ribosomal protein L3 gi|179344873|gb|ACB80285.1| ribosomal protein L3 [Methylobacterium populi BJ001] Length = 246 Score = 268 bits (685), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 135/211 (63%), Positives = 159/211 (75%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+ARK+GMT V+ G +PVTVL +D CQVV HRT +K+GY+A+QVG G+AKVKN Sbjct: 1 MRSGVIARKVGMTRVFTDAGEHVPVTVLQIDQCQVVAHRTTEKDGYVALQVGVGKAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS+ RG F+ V PKKKL EFRV +D L+PVG+ + +F GQ VDVTG T GKGF Sbjct: 61 VSQAERGRFAVAKVEPKKKLAEFRVS-EDALIPVGAEITADHFIPGQFVDVTGTTTGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G RVT +NL+VV Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLKVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGLILV+G VPG WI VRDS K Sbjct: 180 RTDPERGLILVEGAVPGV-AGGWIQVRDSVK 209 >gi|49475794|ref|YP_033835.1| 50S ribosomal protein L3 [Bartonella henselae str. Houston-1] gi|81827700|sp|Q6G2W5|RL3_BARHE RecName: Full=50S ribosomal protein L3 gi|49238601|emb|CAF27842.1| 50S ribosomal protein l3 [Bartonella henselae str. Houston-1] Length = 246 Score = 268 bits (685), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 133/211 (63%), Positives = 163/211 (77%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT +YN G +PVTVL L+NCQVV RT++KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLENCQVVAQRTVEKNGYTAVQLGVGFAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ +RG F+ +V PK K+ EFRV D+ LL +G+ + +F GQ VDVTG TIGKGF Sbjct: 61 TSQALRGHFAKASVEPKAKIAEFRVSPDN-LLDIGTEITAEHFVPGQRVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNIEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 S D +RGLILV+G V G+ K +WILVRD+ K Sbjct: 180 STDVERGLILVRGAVSGS-KGAWILVRDAIK 209 >gi|23014088|ref|ZP_00053925.1| COG0087: Ribosomal protein L3 [Magnetospirillum magnetotacticum MS-1] gi|83312229|ref|YP_422493.1| 50S ribosomal protein L3 [Magnetospirillum magneticum AMB-1] gi|109893435|sp|Q2W2J1|RL3_MAGMM RecName: Full=50S ribosomal protein L3 gi|82947070|dbj|BAE51934.1| Ribosomal protein L3 [Magnetospirillum magneticum AMB-1] Length = 229 Score = 268 bits (684), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 134/211 (63%), Positives = 163/211 (77%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ +G +PVTVL +D CQVV R+++K+GY+AVQ+GAG AKVKN Sbjct: 1 MRSGLIAQKVGMTRIFTEDGTHVPVTVLKVDTCQVVSTRSVEKDGYVAVQLGAGTAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKP R F+ V PKKKL EFRV ++ LL VG+ S ++F GQ VDVTG TIGKGF Sbjct: 61 VSKPARANFAKAKVEPKKKLVEFRVAPEN-LLEVGTELSAAHFIPGQYVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NF GL ATHGVS+SHRSHGSTG RQDPG+VFK KKMAG MG +VT +NL VV Sbjct: 120 AGGMKRWNFRGLEATHGVSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDEQVTTQNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 S D RGLILVKG VPG + SW+LVRD+ K Sbjct: 180 STDADRGLILVKGSVPG-HEGSWVLVRDAVK 209 >gi|49474404|ref|YP_032446.1| 50S ribosomal protein L3 [Bartonella quintana str. Toulouse] gi|81827601|sp|Q6FZC2|RL3_BARQU RecName: Full=50S ribosomal protein L3 gi|49239908|emb|CAF26306.1| 50s ribosomal protein l3 [Bartonella quintana str. Toulouse] Length = 246 Score = 267 bits (683), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 133/211 (63%), Positives = 164/211 (77%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT VYN G +PVTVL L+NCQV+ RT++KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRVYNDAGEHVPVTVLRLENCQVIAQRTIEKNGYTAVQLGVGFAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ +RG F+ V+V PK K+ EFRV D+ LL +G+ + +F GQ VDVTG +IGKGF Sbjct: 61 TSRALRGHFAKVSVEPKAKIAEFRVSPDN-LLDIGTEITAQHFVPGQRVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNIEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 S D +RGLILV+G V G+ K +WILVRD+ K Sbjct: 180 STDVERGLILVRGAVSGS-KGAWILVRDAVK 209 >gi|240850835|ref|YP_002972235.1| 50S ribosomal protein L3 [Bartonella grahamii as4aup] gi|240267958|gb|ACS51546.1| 50S ribosomal protein L3 [Bartonella grahamii as4aup] Length = 245 Score = 267 bits (682), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 133/211 (63%), Positives = 163/211 (77%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT +YN G +PVTVL L+NCQVV RT++KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLENCQVVAQRTVEKNGYTAVQLGVGFAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ +RG F+ +V PK K+ EFRV D+LL VG+ + +F GQ VDVTG +IGKGF Sbjct: 61 TSQALRGHFAKASVEPKAKIAEFRVS-PDNLLDVGTEITVEHFVPGQRVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EV+ Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNIEVI 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 S D +RGLILV+G V G+ K SWILVRD+ K Sbjct: 180 STDSERGLILVRGAVSGS-KGSWILVRDAVK 209 >gi|163851585|ref|YP_001639628.1| 50S ribosomal protein L3 [Methylobacterium extorquens PA1] gi|240138753|ref|YP_002963225.1| 50S ribosomal subunit protein L3 [Methylobacterium extorquens AM1] gi|254561353|ref|YP_003068448.1| 50S ribosomal subunit protein L3 [Methylobacterium extorquens DM4] gi|226730532|sp|A9W4Q1|RL3_METEP RecName: Full=50S ribosomal protein L3 gi|163663190|gb|ABY30557.1| ribosomal protein L3 [Methylobacterium extorquens PA1] gi|240008722|gb|ACS39948.1| 50S ribosomal subunit protein L3 [Methylobacterium extorquens AM1] gi|254268631|emb|CAX24590.1| 50S ribosomal subunit protein L3 [Methylobacterium extorquens DM4] Length = 246 Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 134/211 (63%), Positives = 159/211 (75%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+ARK+GMT V+ G +PVTVL +D CQVV HRT +K+GY+A+QVG G+AKVKN Sbjct: 1 MRSGVIARKVGMTRVFTDAGEHVPVTVLQIDQCQVVAHRTTEKDGYVALQVGVGKAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS+ RG F+ V PKKKL EFRV +D L+PVG+ + +F GQ VDVTG + GKGF Sbjct: 61 VSQAERGRFAVAKVEPKKKLAEFRVS-EDALIPVGAEITADHFIPGQFVDVTGTSTGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G RVT +NL+VV Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLKVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGLILV+G VPG WI VRDS K Sbjct: 180 RTDPERGLILVEGAVPGV-AGGWIQVRDSVK 209 >gi|218530394|ref|YP_002421210.1| 50S ribosomal protein L3 [Methylobacterium chloromethanicum CM4] gi|254803680|sp|B7L0R1|RL3_METC4 RecName: Full=50S ribosomal protein L3 gi|218522697|gb|ACK83282.1| ribosomal protein L3 [Methylobacterium chloromethanicum CM4] Length = 246 Score = 266 bits (681), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 134/211 (63%), Positives = 159/211 (75%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+ARK+GMT V+ G +PVTVL +D CQVV HRT +K+GY+A+QVG G+AKVKN Sbjct: 1 MRSGVIARKVGMTRVFTDAGEHVPVTVLQIDQCQVVAHRTTEKDGYVALQVGVGKAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS+ RG F+ V PKKKL EFRV +D L+PVG+ + +F GQ VDVTG + GKGF Sbjct: 61 VSQAERGRFAVAKVEPKKKLAEFRVS-EDALIPVGAEITADHFIPGQFVDVTGTSTGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G RVT +NL+VV Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLKVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGLILV+G VPG WI VRDS K Sbjct: 180 RTDPERGLILVEGAVPGV-AGGWIQVRDSVK 209 >gi|86135762|ref|ZP_01054341.1| 50S ribosomal protein L3 [Roseobacter sp. MED193] gi|85826636|gb|EAQ46832.1| 50S ribosomal protein L3 [Roseobacter sp. MED193] Length = 236 Score = 266 bits (681), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 133/211 (63%), Positives = 160/211 (75%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ +G++IPVTVLHLD QVV RT DK+GY AVQ+GAG AK K Sbjct: 1 MRSGIIAKKVGMTRLFMEDGQQIPVTVLHLDGLQVVSQRTDDKDGYTAVQLGAGSAKAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F++ V PK+KL EFRV D L+ VG+ S +F GQ VDVTG +IGKGF Sbjct: 61 TSKAMRGHFAASKVEPKRKLVEFRVPADA-LIEVGAEISAEHFLEGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRWNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RGL+ +KG VPG K+ W+ V+D+ K Sbjct: 180 KTDADRGLVFIKGAVPGP-KSGWVTVKDAVK 209 >gi|84685437|ref|ZP_01013335.1| 50S ribosomal protein L3 [Maritimibacter alkaliphilus HTCC2654] gi|84666594|gb|EAQ13066.1| 50S ribosomal protein L3 [Rhodobacterales bacterium HTCC2654] Length = 290 Score = 266 bits (681), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 127/211 (60%), Positives = 164/211 (77%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT ++ +G+++PVTVL LD QVV RT +K+GY AVQ+GAG AK K Sbjct: 2 MRSGVIAKKVGMTRLFLEDGKQVPVTVLQLDGLQVVAQRTTEKDGYTAVQLGAGSAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F++ NV+PK+K+ EFRV ++ L+ VG + ++ GQ VDV+G +IGKGF Sbjct: 62 TSKAMRGHFATANVAPKRKVAEFRVDAEN-LINVGEEITADHYFAGQFVDVSGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPGRVFK KKMAG MG RVT +NL+VV Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGRVFKGKKMAGHMGAARVTTQNLQVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGLI++KG VPG+ K W+ ++D+ K Sbjct: 181 KTDSERGLIMIKGAVPGS-KGGWVTIKDAVK 210 >gi|163868650|ref|YP_001609859.1| 50S ribosomal protein L3 [Bartonella tribocorum CIP 105476] gi|189042832|sp|A9IW27|RL3_BART1 RecName: Full=50S ribosomal protein L3 gi|161018306|emb|CAK01864.1| 50S ribosomal protein L3 [Bartonella tribocorum CIP 105476] Length = 245 Score = 266 bits (679), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 133/211 (63%), Positives = 163/211 (77%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT +YN G +PVTVL L+NCQVV RT++KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLENCQVVAQRTVEKNGYTAVQLGVGFAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ +RG F+ +V PK K+ EFRV D+LL +G+ + +F GQ VDVTG +IGKGF Sbjct: 61 TSQALRGHFAKASVEPKAKIAEFRVS-PDNLLDIGTEITVEHFVPGQRVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNIEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 S D +RGLILV+G V G+ K SWILVRD+ K Sbjct: 180 STDIERGLILVRGAVSGS-KGSWILVRDAVK 209 >gi|294675856|ref|YP_003576471.1| 50S ribosomal protein L3 [Rhodobacter capsulatus SB 1003] gi|294474676|gb|ADE84064.1| 50S ribosomal protein L3 [Rhodobacter capsulatus SB 1003] Length = 238 Score = 266 bits (679), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 128/214 (59%), Positives = 164/214 (76%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT ++ +G+++PVTVL LDN QVV RT++ +GY AVQ+GAGEAK K Sbjct: 1 MRSGVIAKKLGMTRLFLEDGKQVPVTVLLLDNLQVVAQRTVETDGYTAVQLGAGEAKAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + MRG F+ NV+PK+KL EFRV ++L+ VG+ S ++ GQ VD+ G +IGKGF Sbjct: 61 TTAAMRGHFAKANVAPKRKLCEFRVS-PENLIDVGAEISAEHYLAGQHVDIAGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVS+SHRSHGSTG QDPG+VFK KKMAG +G RVT +NL+VV Sbjct: 120 AGAMKRHNFGGLRASHGVSVSHRSHGSTGQCQDPGKVFKGKKMAGHLGAARVTTQNLQVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D RGLI+VKG VPGA K W+ ++D+ K A Sbjct: 180 RTDAARGLIMVKGSVPGA-KGGWVTIKDAVKKAA 212 >gi|212288260|sp|A8IAS6|RL3_AZOC5 RecName: Full=50S ribosomal protein L3 Length = 241 Score = 266 bits (679), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 133/211 (63%), Positives = 160/211 (75%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT ++ G +PVTVL +++CQVV HRTLDKNGY+AVQ+GAG+ K KN Sbjct: 1 MRSGVIAQKLGMTRIFTDAGEHLPVTVLKVESCQVVAHRTLDKNGYVAVQLGAGKRKPKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +K RG F+ V PK+KL EFRV D L+PVG+ + +F VGQ VDVTG TIGKGF Sbjct: 61 TNKAERGQFARAEVEPKRKLAEFRVDADA-LIPVGAEITADHFVVGQYVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGGLRA+HGVSISHRS GSTG RQDPG+ FKNKKM G MG VT +NL+VV Sbjct: 120 AGGMKRHNFGGLRASHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGDVTVTTQNLKVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGLI V+G VPG WI+VRD+ K Sbjct: 180 MTDVERGLIAVEGAVPG-HAGGWIMVRDAVK 209 >gi|158424178|ref|YP_001525470.1| 50S ribosomal protein L3 [Azorhizobium caulinodans ORS 571] gi|158331067|dbj|BAF88552.1| ribosomal protein L3 [Azorhizobium caulinodans ORS 571] Length = 248 Score = 266 bits (679), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 133/211 (63%), Positives = 160/211 (75%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT ++ G +PVTVL +++CQVV HRTLDKNGY+AVQ+GAG+ K KN Sbjct: 8 MRSGVIAQKLGMTRIFTDAGEHLPVTVLKVESCQVVAHRTLDKNGYVAVQLGAGKRKPKN 67 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +K RG F+ V PK+KL EFRV D L+PVG+ + +F VGQ VDVTG TIGKGF Sbjct: 68 TNKAERGQFARAEVEPKRKLAEFRVDADA-LIPVGAEITADHFVVGQYVDVTGTTIGKGF 126 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGGLRA+HGVSISHRS GSTG RQDPG+ FKNKKM G MG VT +NL+VV Sbjct: 127 AGGMKRHNFGGLRASHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGDVTVTTQNLKVV 186 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGLI V+G VPG WI+VRD+ K Sbjct: 187 MTDVERGLIAVEGAVPG-HAGGWIMVRDAVK 216 >gi|163739437|ref|ZP_02146847.1| 50S ribosomal protein L3 [Phaeobacter gallaeciensis BS107] gi|163740231|ref|ZP_02147625.1| 50S ribosomal protein L3 [Phaeobacter gallaeciensis 2.10] gi|161386089|gb|EDQ10464.1| 50S ribosomal protein L3 [Phaeobacter gallaeciensis 2.10] gi|161387190|gb|EDQ11549.1| 50S ribosomal protein L3 [Phaeobacter gallaeciensis BS107] Length = 237 Score = 266 bits (679), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 131/211 (62%), Positives = 161/211 (76%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ +G+++PVTVL LD QV RT +K+GY AVQ+GAG AKVK Sbjct: 1 MRSGIIAKKVGMTRLFLEDGKQVPVTVLQLDGLQVTAQRTEEKDGYTAVQLGAGSAKVKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK MRG F++ V PK+KL EFRV D L+ VG+ S +F GQ VDVTG +IGKGF Sbjct: 61 VSKAMRGHFAAAKVEPKRKLVEFRVPADA-LIEVGAEISAEHFLEGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RGLI++KG VPG+ K W+ V+D+ K Sbjct: 180 KTDADRGLIMIKGAVPGS-KGGWVTVKDAVK 209 >gi|170738703|ref|YP_001767358.1| 50S ribosomal protein L3 [Methylobacterium sp. 4-46] gi|226730536|sp|B0UHW9|RL3_METS4 RecName: Full=50S ribosomal protein L3 gi|168192977|gb|ACA14924.1| ribosomal protein L3 [Methylobacterium sp. 4-46] Length = 246 Score = 265 bits (678), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 133/211 (63%), Positives = 159/211 (75%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G +PVTVL +D CQVV HRT++KNGY+A+QVG G+AKVKN Sbjct: 1 MRSGVIAQKVGMTRVFTDAGEHVPVTVLKVDQCQVVAHRTVEKNGYVALQVGVGKAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK RG F+ V PK+KL EFRV +D L+PVG+ + +F GQ VDVTG T GKGF Sbjct: 61 VSKAERGRFAIAKVEPKRKLAEFRVT-EDALIPVGAEITADHFIPGQFVDVTGTTTGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G RVT +NL VV Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGLILV+G VPG WI +RD+ K Sbjct: 180 RTDPERGLILVEGAVPGV-AGGWIQIRDAVK 209 >gi|254461019|ref|ZP_05074435.1| ribosomal protein L3 [Rhodobacterales bacterium HTCC2083] gi|206677608|gb|EDZ42095.1| ribosomal protein L3 [Rhodobacteraceae bacterium HTCC2083] Length = 241 Score = 265 bits (678), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 130/211 (61%), Positives = 161/211 (76%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ +G+ IPVTVL LD QVV RT DK+GY AVQ+GAG AK K Sbjct: 1 MRSGIIAKKVGMTRLFMEDGKAIPVTVLQLDALQVVAQRTSDKDGYTAVQLGAGTAKAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ MRG F++ V+PK+K+ EFRV +D+L+ VG S ++ GQ VDV+G +IGKGF Sbjct: 61 TSQAMRGHFAAAKVAPKRKVAEFRVS-EDNLINVGEEISAEHYLEGQKVDVSGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 120 QGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RGLI++KG VPG+ K W+ V+D+ K Sbjct: 180 KTDADRGLIMIKGAVPGS-KGGWVTVKDAVK 209 >gi|254474359|ref|ZP_05087745.1| ribosomal protein L3 [Ruegeria sp. R11] gi|214028602|gb|EEB69437.1| ribosomal protein L3 [Ruegeria sp. R11] Length = 239 Score = 265 bits (678), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 131/211 (62%), Positives = 161/211 (76%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ +G+++PVTVL LD QV RT +K+GY AVQ+GAG AKVK Sbjct: 3 MRSGIIAKKVGMTRLFLEDGKQVPVTVLQLDGLQVTAQRTEEKDGYTAVQLGAGSAKVKR 62 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK MRG F++ V PK+KL EFRV D L+ VG+ S +F GQ VDVTG +IGKGF Sbjct: 63 VSKAMRGHFAAAKVEPKRKLVEFRVPADG-LIEVGAEISAEHFLEGQKVDVTGTSIGKGF 121 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 122 AGAMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 181 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RGLI++KG VPG+ K W+ V+D+ K Sbjct: 182 KTDADRGLIMIKGAVPGS-KGGWVTVKDAVK 211 >gi|154253177|ref|YP_001414001.1| 50S ribosomal protein L3 [Parvibaculum lavamentivorans DS-1] gi|171769627|sp|A7HWR1|RL3_PARL1 RecName: Full=50S ribosomal protein L3 gi|154157127|gb|ABS64344.1| ribosomal protein L3 [Parvibaculum lavamentivorans DS-1] Length = 251 Score = 265 bits (678), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 132/212 (62%), Positives = 160/212 (75%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+ +K+GMT ++ +GR +PVTVL LDNCQVV RT +KNGY AVQ+G G AK KN Sbjct: 1 MRSGVIVKKVGMTRLFMEDGRHVPVTVLKLDNCQVVSQRTDEKNGYTAVQLGTGRAKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ RG F+ +V PK +L EFRV D+ LL VG + +F GQ VDV+G +IGKGF Sbjct: 61 VANAQRGQFARASVEPKLELVEFRVSPDN-LLDVGVEITADHFIAGQYVDVSGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGGLRATHGVS+SHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 120 AGVMKRHNFGGLRATHGVSVSHRSHGSTGQNQDPGKVFKGKKMAGHMGATRVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +GLI+VKG VPG+ K W+LVRD+ K+ Sbjct: 180 RTDADKGLIMVKGAVPGS-KGGWVLVRDAVKT 210 >gi|83858566|ref|ZP_00952088.1| 50S ribosomal protein L3 [Oceanicaulis alexandrii HTCC2633] gi|83853389|gb|EAP91241.1| 50S ribosomal protein L3 [Oceanicaulis alexandrii HTCC2633] Length = 246 Score = 265 bits (678), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 129/211 (61%), Positives = 164/211 (77%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+KLGMT V+ +G +PVTVLHLD QVV RT + +GY AVQ+GAG+AK K Sbjct: 1 MRTGLLAKKLGMTRVFTEDGDHVPVTVLHLDGLQVVAQRTSENDGYTAVQLGAGKAKAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ +V PK+KL EFRV +D L+ G+ S +F VGQ VDV+G +IGKGF Sbjct: 61 TSKAMRGHFAKASVEPKRKLVEFRV-PEDALIEAGAELSAEHFVVGQKVDVSGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG +G RVT+++LE+V Sbjct: 120 AGGMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHLGSERVTIQSLEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +RGL+LVKG VPG+K+ SW+ +RD+ K Sbjct: 180 RVDAERGLVLVKGAVPGSKE-SWVEIRDAVK 209 >gi|114570345|ref|YP_757025.1| 50S ribosomal protein L3P [Maricaulis maris MCS10] gi|122315784|sp|Q0ANQ0|RL3_MARMM RecName: Full=50S ribosomal protein L3 gi|114340807|gb|ABI66087.1| LSU ribosomal protein L3P [Maricaulis maris MCS10] Length = 268 Score = 265 bits (678), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 130/210 (61%), Positives = 162/210 (77%), Gaps = 2/210 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GVVARKLGMT ++ +G +P TVLH+DN QVV H+T D++GY+A+Q+GAGEAK K Sbjct: 7 RTGVVARKLGMTRIFAEDGSHVPCTVLHMDNVQVVSHKTADRDGYVALQLGAGEAKAKRT 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 K MRG F+ V+PK+KL EFRV +D L+ VGS + +F GQ VDV G++IGKGF+ Sbjct: 67 PKAMRGHFAKAKVAPKRKLVEFRVA-EDALIEVGSELTADHFVPGQKVDVAGISIGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 GAMKRH FGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 126 GAMKRHGFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNIEVVR 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +RG++LVKG VPG+ W+ +RD+ K Sbjct: 186 VDVERGIVLVKGAVPGS-AGGWVELRDAIK 214 >gi|254512299|ref|ZP_05124366.1| ribosomal protein L3 [Rhodobacteraceae bacterium KLH11] gi|221536010|gb|EEE38998.1| ribosomal protein L3 [Rhodobacteraceae bacterium KLH11] Length = 241 Score = 265 bits (678), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 130/211 (61%), Positives = 161/211 (76%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ +G++IPVTVLHLDN QVV RT DK+GY AVQ+GAG AK K Sbjct: 1 MRSGIIAKKVGMTRLFMEDGKQIPVTVLHLDNLQVVAQRTADKDGYTAVQLGAGAAKAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG +++ V PK+KL EFRV +D L+ VG+ S +F GQ VDV+G +IGKGF Sbjct: 61 TSKAMRGHYAAAKVEPKRKLAEFRVS-EDGLIDVGAEISAEHFLEGQKVDVSGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D R L+ +KG VPG K+ W+ V+D+ K Sbjct: 180 KTDADRNLVFIKGAVPGP-KSGWVTVKDAVK 209 >gi|260425273|ref|ZP_05779253.1| 50S ribosomal protein L3 [Citreicella sp. SE45] gi|260423213|gb|EEX16463.1| 50S ribosomal protein L3 [Citreicella sp. SE45] Length = 280 Score = 265 bits (677), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 128/211 (60%), Positives = 162/211 (76%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSGV+A+K+GMT ++ +G++IPVTVL LD CQVV RT DK+GY AVQ+GAG K KN Sbjct: 2 LRSGVIAKKVGMTRLFMEDGKQIPVTVLQLDGCQVVAQRTADKDGYTAVQLGAGSIKAKN 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS PMRG F+ V PK+K+ EFRV ++ L+ VG + ++ GQ VDV+G TIGKGF Sbjct: 62 VSNPMRGHFAVAKVEPKRKIAEFRVDAEN-LIRVGEEITADHYFEGQFVDVSGTTIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RG+I++KG VPG+ K W+ ++D+ K Sbjct: 181 KTDADRGIIMIKGAVPGS-KGGWVTIKDAVK 210 >gi|162149174|ref|YP_001603635.1| 50S ribosomal protein L3 [Gluconacetobacter diazotrophicus PAl 5] gi|209545082|ref|YP_002277311.1| 50S ribosomal protein L3 [Gluconacetobacter diazotrophicus PAl 5] gi|189042847|sp|A9H3R5|RL3_GLUDA RecName: Full=50S ribosomal protein L3 gi|161787751|emb|CAP57347.1| 50S ribosomal protein L3 [Gluconacetobacter diazotrophicus PAl 5] gi|209532759|gb|ACI52696.1| ribosomal protein L3 [Gluconacetobacter diazotrophicus PAl 5] Length = 227 Score = 265 bits (677), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 132/218 (60%), Positives = 164/218 (75%), Gaps = 2/218 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+KLGMT ++ +G +PVTVLH+DN QVV RT D++GY AVQ+G G AKVKN Sbjct: 1 MRTGLIAKKLGMTRLFKEDGTHVPVTVLHVDNLQVVDVRTQDRDGYTAVQLGFGNAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKP RG F+ V V PKKKL EFRV DD +L G+ S ++F VGQ VDVT + GKGF Sbjct: 61 VSKPNRGHFARVKVEPKKKLAEFRVA-DDAVLEAGATLSAAHFVVGQKVDVTSTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NF GL A+HGVSISHRSHGSTG RQDPG+ FKNKKMAG +G RVT NLEV Sbjct: 120 AGAMKRWNFAGLEASHGVSISHRSHGSTGNRQDPGKTFKNKKMAGHLGSERVTTLNLEVA 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +VD ++ L++V+G VPG KN +LVRD+ K A + + Sbjct: 180 AVDAEKNLLMVRGSVPGG-KNELVLVRDAIKKARHAEA 216 >gi|259415840|ref|ZP_05739760.1| 50S ribosomal protein L3 [Silicibacter sp. TrichCH4B] gi|259347279|gb|EEW59056.1| 50S ribosomal protein L3 [Silicibacter sp. TrichCH4B] Length = 239 Score = 264 bits (675), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 133/211 (63%), Positives = 161/211 (76%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ +G++IPVTVL LD QVV RT DK+GY AVQ+GAG AKVK Sbjct: 1 MRSGIIAKKVGMTRLFMEDGKQIPVTVLSLDGLQVVAQRTEDKDGYTAVQLGAGSAKVKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK MRG F++ V PK+KL EFRV D L+ VG+ S +F GQ VDVTG +IGKGF Sbjct: 61 VSKAMRGHFAASKVEPKRKLVEFRVPADG-LIEVGAEISAEHFLTGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RGL+ +KG VPG K+ W+ V+D+ K Sbjct: 180 KTDADRGLVFIKGAVPGP-KSGWVTVKDAVK 209 >gi|209964040|ref|YP_002296955.1| ribosomal protein L3 [Rhodospirillum centenum SW] gi|226730556|sp|B6IRQ6|RL3_RHOCS RecName: Full=50S ribosomal protein L3 gi|209957506|gb|ACI98142.1| ribosomal protein L3 [Rhodospirillum centenum SW] Length = 235 Score = 264 bits (675), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 131/211 (62%), Positives = 161/211 (76%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+KLGMT V+ EG +PVTVL LD QVV RT D++GY A+Q+GAG+AKVKN Sbjct: 1 MRSGLIAQKLGMTRVFTDEGEHVPVTVLKLDQVQVVAQRTEDRDGYTALQLGAGKAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K R F+ V PKKKL EFRV D L+ VG+ + +F GQ VDVTG TIG+GF Sbjct: 61 VAKAQREQFARAKVEPKKKLVEFRVTPDA-LIEVGAEITADHFVPGQFVDVTGTTIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G M+R NFGGLRATHGVS+SHRSHGSTG RQDPG+ FKNKKMAG G +VTV+NL+VV Sbjct: 120 TGPMRRWNFGGLRATHGVSVSHRSHGSTGGRQDPGKTFKNKKMAGHYGVEKVTVQNLKVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +RGLILVKG +PG + W+L+RD+ K Sbjct: 180 QVDVERGLILVKGAIPG-HEGGWVLIRDAVK 209 >gi|154245623|ref|YP_001416581.1| 50S ribosomal protein L3 [Xanthobacter autotrophicus Py2] gi|226730590|sp|A7IFY1|RL3_XANP2 RecName: Full=50S ribosomal protein L3 gi|154159708|gb|ABS66924.1| ribosomal protein L3 [Xanthobacter autotrophicus Py2] Length = 241 Score = 264 bits (674), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 132/211 (62%), Positives = 159/211 (75%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT ++ G +PVTVL +++CQVV HRTLDKNGY+AVQ+GAG K KN Sbjct: 1 MRSGVIAQKVGMTRIFTDAGEHVPVTVLKVESCQVVAHRTLDKNGYVAVQLGAGRRKPKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++ RG F+ V PK KL EFRV ++ L+PVG+ + +F VGQ VDVTG TIGKGF Sbjct: 61 VTRAERGHFAVAQVEPKHKLAEFRV-PEEALIPVGAEITADHFVVGQYVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G MG VT +NL+VV Sbjct: 120 AGGMKRHNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGDVTVTTQNLKVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGLI V+G VPG WI VRD+ K Sbjct: 180 MTDVERGLIAVEGAVPG-HAGGWITVRDAVK 209 >gi|307946286|ref|ZP_07661621.1| 50S ribosomal protein L3 [Roseibium sp. TrichSKD4] gi|307769950|gb|EFO29176.1| 50S ribosomal protein L3 [Roseibium sp. TrichSKD4] Length = 240 Score = 264 bits (674), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 132/214 (61%), Positives = 161/214 (75%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT +YN G +PVTVL L+ CQVV HRT +KNGY A+QVG G AKV+N Sbjct: 1 MRSGVIAQKVGMTRIYNDAGANVPVTVLRLEKCQVVAHRTEEKNGYTALQVGVGLAKVRN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 K MRG ++ V PK+KL EFRV D+ ++ VG+ + ++ GQ VDVTG +IGKGF Sbjct: 61 TPKAMRGHYAVAKVEPKRKLAEFRVSADN-MIDVGAEITADHYVEGQFVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SISHRSHGSTG QDPGRVFK KKMAG MG RVT +NL+VV Sbjct: 120 AGVMKRHNFGGGRASHGNSISHRSHGSTGQCQDPGRVFKGKKMAGHMGDARVTTQNLKVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D +RGLI+V+G VPG K WILVRD+ K A+ Sbjct: 180 RTDVERGLIMVEGSVPGT-KGGWILVRDAIKKAL 212 >gi|319408765|emb|CBI82422.1| 50S ribosomal protein L3 [Bartonella schoenbuchensis R1] Length = 246 Score = 264 bits (674), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 133/211 (63%), Positives = 162/211 (76%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT +YN G +PVTVL L+NCQV+ RT++KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRIYNEAGEHVPVTVLRLENCQVIAQRTVEKNGYTAVQLGVGFAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS+ +RG F+ V PK K+ EFRV D+LL VG+ + +F GQ VDVTG +IGKGF Sbjct: 61 VSRALRGHFAKAVVEPKAKVAEFRVS-PDNLLDVGTEITVEHFIPGQRVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNIEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 S D RGLILV+G V G+ K +WILVRD+ K Sbjct: 180 STDIDRGLILVRGAVSGS-KGAWILVRDAVK 209 >gi|99080087|ref|YP_612241.1| 50S ribosomal protein L3 [Ruegeria sp. TM1040] gi|123077810|sp|Q1GK37|RL3_SILST RecName: Full=50S ribosomal protein L3 gi|99036367|gb|ABF62979.1| LSU ribosomal protein L3P [Ruegeria sp. TM1040] Length = 239 Score = 264 bits (674), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 133/211 (63%), Positives = 161/211 (76%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ +G++IPVTVL LD QVV RT DK+GY AVQ+GAG AKVK Sbjct: 1 MRSGIIAKKVGMTRLFMEDGKQIPVTVLSLDGLQVVAQRTEDKDGYTAVQLGAGSAKVKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK MRG F++ V PK+KL EFRV D L+ VG+ S +F GQ VDVTG +IGKGF Sbjct: 61 VSKAMRGHFAASKVEPKRKLVEFRVPADG-LIEVGAEISAEHFLEGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RGL+ +KG VPG K+ W+ V+D+ K Sbjct: 180 KTDADRGLVFIKGAVPGP-KSGWVTVKDAVK 209 >gi|254438817|ref|ZP_05052311.1| ribosomal protein L3 [Octadecabacter antarcticus 307] gi|198254263|gb|EDY78577.1| ribosomal protein L3 [Octadecabacter antarcticus 307] Length = 278 Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 126/211 (59%), Positives = 161/211 (76%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSG++A+K+GMT ++ +GR+IPVTVL LD QVV RT +K+GY AVQ+GAG AK K Sbjct: 4 LRSGIIAKKVGMTRLFQEDGRQIPVTVLQLDKLQVVAQRTAEKDGYTAVQLGAGTAKAKR 63 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S PMRG F++ V PK+K+ EFRV +++L+PVG S++ GQ VDV+G +IGKGF Sbjct: 64 TSAPMRGHFAAAKVEPKRKVCEFRVS-EENLIPVGEEIIASHYFEGQFVDVSGTSIGKGF 122 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNF GLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG ++T +NL V+ Sbjct: 123 AGAMKRHNFSGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAAKITTQNLVVI 182 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RGLI+VKG VPG+ K W+ V+D+ K Sbjct: 183 KTDPDRGLIMVKGAVPGS-KGGWVTVKDAVK 212 >gi|220921899|ref|YP_002497200.1| 50S ribosomal protein L3 [Methylobacterium nodulans ORS 2060] gi|254803681|sp|B8IS85|RL3_METNO RecName: Full=50S ribosomal protein L3 gi|219946505|gb|ACL56897.1| ribosomal protein L3 [Methylobacterium nodulans ORS 2060] Length = 251 Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 133/211 (63%), Positives = 160/211 (75%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G +PVTVL +D CQVV HRT++KNGY+A+QVG G+AKVKN Sbjct: 1 MRSGVIAQKVGMTRVFTDAGEHVPVTVLKVDQCQVVAHRTVEKNGYVALQVGVGKAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK RG F+ V PK+KL EFRV +D L+PVG+ + +F GQ VDVTG+T GKGF Sbjct: 61 VSKAERGRFAIAKVEPKRKLAEFRVS-EDALIPVGAEITADHFIPGQFVDVTGITTGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRA+HGVSISHRS GSTG RQDPG+ FKNKKM G +G RVT +NL VV Sbjct: 120 AGGMKRWNFGGLRASHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGLILV+G VPG WI VRD+ K Sbjct: 180 RTDPERGLILVEGAVPGV-AGGWIHVRDAVK 209 >gi|58038855|ref|YP_190819.1| 50S ribosomal protein L3 [Gluconobacter oxydans 621H] gi|81819160|sp|Q5FTY3|RL3_GLUOX RecName: Full=50S ribosomal protein L3 gi|58001269|gb|AAW60163.1| LSU ribosomal protein L3P [Gluconobacter oxydans 621H] Length = 227 Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 127/213 (59%), Positives = 162/213 (76%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+KLGMT ++ +G +PVTVLHLDN +VV RT +++GY A+Q+G G AKVKN Sbjct: 1 MRTGLIAKKLGMTRLFKEDGTHVPVTVLHLDNVEVVDARTNERDGYTAIQLGLGNAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K RG F+ V PK+ L EFRV +D LL G+ S ++F VGQ VDVTG + GKGF Sbjct: 61 VTKANRGHFARTKVEPKRHLAEFRVS-EDALLEAGTKLSAAHFVVGQKVDVTGQSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG RVT NLE+ Sbjct: 120 AGVMKRHNFAGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGDERVTTLNLEIA 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +VD++R LI+V+G +PGA KN +L+RD+ K A Sbjct: 180 AVDEERNLIMVRGAIPGA-KNGLVLIRDAIKKA 211 >gi|89070557|ref|ZP_01157846.1| 50S ribosomal protein L3 [Oceanicola granulosus HTCC2516] gi|89043864|gb|EAR50062.1| 50S ribosomal protein L3 [Oceanicola granulosus HTCC2516] Length = 292 Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 127/211 (60%), Positives = 161/211 (76%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSG++A+K+GMT ++ +G++IPVTVL LD QVV RT++ +GY AVQ+GAG AK K Sbjct: 2 LRSGIIAKKVGMTRIFQEDGKQIPVTVLQLDKLQVVAKRTVETDGYSAVQLGAGIAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S PMRG F+ NV PK+K+ EFRV ++ L+ VG + ++ GQ VDV+G +IGKGF Sbjct: 62 TSAPMRGHFAKANVEPKRKIAEFRVAAEN-LIEVGEEITADHYFEGQYVDVSGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RGLI+VKG VPG+ K W+ V+D+ K Sbjct: 181 RTDADRGLIMVKGAVPGS-KGGWVTVKDAVK 210 >gi|103488295|ref|YP_617856.1| 50S ribosomal protein L3 [Sphingopyxis alaskensis RB2256] gi|123078063|sp|Q1GP99|RL3_SPHAL RecName: Full=50S ribosomal protein L3 gi|98978372|gb|ABF54523.1| LSU ribosomal protein L3P [Sphingopyxis alaskensis RB2256] Length = 257 Score = 263 bits (672), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 128/211 (60%), Positives = 159/211 (75%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR +PVTVL L+ CQVV R +++GY+AVQ+GAG AK KN Sbjct: 1 MRTGVIAKKMGMTRLFQDDGRHVPVTVLSLEGCQVVSVRDKERDGYVAVQLGAGTAKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP RG + V PK KL EFRV DD L VG+ S +F GQ+VD+ G+T GKGF Sbjct: 61 VAKPQRGAYGKAEVEPKAKLVEFRV-ADDATLDVGAELSADHFVAGQMVDIQGVTQGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG T +NLE+V Sbjct: 120 AGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGARNRTQQNLEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGL+ VKG VPG+ K W+LVRD+ K Sbjct: 180 RTDAERGLLFVKGSVPGS-KGGWLLVRDAVK 209 >gi|310817008|ref|YP_003964972.1| 50S ribosomal protein L3 [Ketogulonicigenium vulgare Y25] gi|308755743|gb|ADO43672.1| 50S ribosomal protein L3 [Ketogulonicigenium vulgare Y25] Length = 237 Score = 263 bits (672), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 121/211 (57%), Positives = 162/211 (76%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSG +A+K+GMT ++ +GR++PVTVL +N QVV RT++K+GY AVQ+GAG AK KN Sbjct: 4 LRSGTIAKKIGMTRLFLEDGRQVPVTVLQFENLQVVAQRTVEKDGYTAVQLGAGTAKAKN 63 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++PMRG F++ V PK+KL EFRV ++L+PVG+ ++ GQ VD++G +IGKGF Sbjct: 64 VTQPMRGHFAAAKVEPKRKLAEFRV-TPENLIPVGAEIIADHYVAGQFVDISGTSIGKGF 122 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGGLRA+HGVS+SHRSHGS G QDPGR+FK KKMAG MG RVT +NL+V+ Sbjct: 123 AGVMKRHNFGGLRASHGVSVSHRSHGSVGQCQDPGRIFKGKKMAGHMGSARVTTQNLQVI 182 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RGL++VKG VPG K W+ ++D+ K Sbjct: 183 RTDSTRGLVMVKGAVPG-NKGGWVTIKDAVK 212 >gi|319899099|ref|YP_004159192.1| 50S ribosomal protein L3 [Bartonella clarridgeiae 73] gi|319403063|emb|CBI76618.1| 50S ribosomal protein L3 [Bartonella clarridgeiae 73] Length = 246 Score = 263 bits (672), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 133/211 (63%), Positives = 160/211 (75%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT +YN G +PVTVL LD CQVV RT++KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLDKCQVVAQRTVEKNGYTAVQLGVGLAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ +RG F+ V PK K+ EFRV D+ LL VG+ + +F GQ VDVTG +IGKGF Sbjct: 61 TSRALRGHFAKAAVEPKAKIAEFRVSPDN-LLDVGTEITVEHFVPGQRVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EV+ Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNVEVI 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 S D RGLILV+G V G+ K SWILVRD+ K Sbjct: 180 STDVDRGLILVRGSVSGS-KGSWILVRDAVK 209 >gi|319404425|emb|CBI78028.1| 50S ribosomal protein L3 [Bartonella rochalimae ATCC BAA-1498] Length = 254 Score = 263 bits (672), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 133/211 (63%), Positives = 160/211 (75%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT +YN G +PVTVL LD CQV+ RT+ KNGY AVQ+G G AK+KN Sbjct: 9 MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLDKCQVIAQRTVKKNGYTAVQLGVGFAKIKN 68 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK +RG F+ V PK K+ EFRV D+LL VG+ + +F GQ VDVTG++IGKGF Sbjct: 69 TSKALRGHFAKAVVEPKAKIAEFRVS-PDNLLDVGTEITVEHFVPGQRVDVTGVSIGKGF 127 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 128 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQARVTTQNIEVV 187 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 S D RGLILV+G V G+ K SWILVRD+ K Sbjct: 188 STDVDRGLILVRGSVSGS-KGSWILVRDAIK 217 >gi|319407426|emb|CBI81077.1| 50S ribosomal protein L3 [Bartonella sp. 1-1C] Length = 254 Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 133/211 (63%), Positives = 161/211 (76%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT +YN G +PVTVL LD CQV+ RT++KNGY AVQ+G G AK+KN Sbjct: 9 MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLDKCQVIAQRTVEKNGYTAVQLGVGFAKIKN 68 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK +RG F+ V PK K+ EFRV D+LL VG+ + +F GQ VDVTG++IGKGF Sbjct: 69 TSKALRGHFAKAVVEPKAKIAEFRVS-PDNLLDVGTEITVEHFVPGQRVDVTGVSIGKGF 127 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 128 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGRVRVTTQNIEVV 187 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 S D RGLILV+G V G+ K SWILVRD+ K Sbjct: 188 STDVDRGLILVRGSVSGS-KGSWILVRDAVK 217 >gi|170748636|ref|YP_001754896.1| 50S ribosomal protein L3 [Methylobacterium radiotolerans JCM 2831] gi|226730535|sp|B1LWS6|RL3_METRJ RecName: Full=50S ribosomal protein L3 gi|170655158|gb|ACB24213.1| ribosomal protein L3 [Methylobacterium radiotolerans JCM 2831] Length = 241 Score = 262 bits (670), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 132/211 (62%), Positives = 158/211 (74%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G +PVTVL +D CQVV HRT++KNGY+A+QVG G+AKVKN Sbjct: 1 MRSGVIAQKVGMTRVFTDAGEHVPVTVLKIDQCQVVAHRTVEKNGYVALQVGVGKAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS RG F+ V PKKKL EFRV +D L+PVG+ + +F GQ VDVTG T GKGF Sbjct: 61 VSAAERGRFAVAKVEPKKKLAEFRVT-EDALIPVGAEITADHFIPGQFVDVTGTTTGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G RVT +NL VV Sbjct: 120 AGGIKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGLILV+G VPG WI +RD+ K Sbjct: 180 RTDPERGLILVEGAVPGV-AGGWIQIRDAVK 209 >gi|126724861|ref|ZP_01740704.1| 50S ribosomal protein L3 [Rhodobacterales bacterium HTCC2150] gi|126706025|gb|EBA05115.1| 50S ribosomal protein L3 [Rhodobacterales bacterium HTCC2150] Length = 244 Score = 262 bits (669), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 125/211 (59%), Positives = 163/211 (77%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT ++ +GR++PVTVL LDN QVV RT +++GY AVQ+G G AK K Sbjct: 1 MRSGVIAKKVGMTRLFMEDGRQVPVTVLQLDNLQVVSQRTAERDGYTAVQLGTGLAKAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ MRG F++ V PK+K+ EFRV ++ ++ VG + ++ GQ+VDV+G +IGKGF Sbjct: 61 TSQAMRGHFAAAKVEPKRKVAEFRVAPEN-MINVGEEITADHYFEGQIVDVSGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV Sbjct: 120 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 S D RGLI++KG VPG+ K W+ ++D+ K Sbjct: 180 STDTDRGLIMIKGAVPGS-KGGWVTIKDAAK 209 >gi|163745537|ref|ZP_02152897.1| ribosomal protein L3 [Oceanibulbus indolifex HEL-45] gi|161382355|gb|EDQ06764.1| ribosomal protein L3 [Oceanibulbus indolifex HEL-45] Length = 292 Score = 262 bits (669), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 128/211 (60%), Positives = 158/211 (74%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSGV+A+K+GMT ++ +G++IPVTVL LD QVV RT D++GY AVQ+GAG AK K Sbjct: 2 LRSGVIAKKVGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTADRDGYTAVQLGAGSAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ MRG F++ V PK+K+ EFRV + +L VG ++ GQ VDV G +IGKGF Sbjct: 62 TSQAMRGHFAAAKVEPKRKVAEFRVDAEA-MLEVGEEIIADHYFAGQYVDVAGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RGLI+VKG VPG+ K W+ V+D+ K Sbjct: 181 KTDSARGLIMVKGAVPGS-KGGWVTVKDAVK 210 >gi|146278568|ref|YP_001168727.1| 50S ribosomal protein L3 [Rhodobacter sphaeroides ATCC 17025] gi|145556809|gb|ABP71422.1| LSU ribosomal protein L3P [Rhodobacter sphaeroides ATCC 17025] Length = 239 Score = 262 bits (669), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 128/214 (59%), Positives = 161/214 (75%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT ++ +G+++PVTVL LD+ QVV RT +K+GY AVQ+GAG AK K Sbjct: 1 MRSGVIAKKLGMTRLFLEDGKQVPVTVLQLDSLQVVAQRTAEKDGYTAVQLGAGAAKAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S MRG F+ NV PK+K+ EFRV D L+ VG+ + ++ GQ VD+ G +IGKGF Sbjct: 61 TSAGMRGHFAKANVEPKRKIAEFRVTPDC-LIDVGAEITADHYFAGQFVDIAGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D RGLI+VKG VPG+ K W+ ++D+ K V Sbjct: 180 RTDSDRGLIMVKGAVPGS-KGGWVTIKDAVKKPV 212 >gi|332187797|ref|ZP_08389531.1| 50S ribosomal protein L3 [Sphingomonas sp. S17] gi|332012147|gb|EGI54218.1| 50S ribosomal protein L3 [Sphingomonas sp. S17] Length = 244 Score = 262 bits (669), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 130/211 (61%), Positives = 159/211 (75%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+KLGMT ++ +GR +PVTVL L+ QVV R +D++GY AVQ+GAG AK KN Sbjct: 1 MRTGVIAKKLGMTRLFQDDGRHVPVTVLALEGVQVVARREMDRDGYTAVQLGAGVAKTKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP RG F V PK+ L EFRV +D LL VG+ + +F GQ VD+ G T GKGF Sbjct: 61 VAKPQRGHFGKAEVEPKQVLVEFRVN-EDGLLDVGAEIAADHFVPGQYVDIQGRTQGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGRVFKNKKMAG MG T +NLE+V Sbjct: 120 AGAMKRWNFGGLRATHGVSVSHRSHGSTGNRQDPGRVFKNKKMAGHMGDKNRTQQNLEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 S D +RGLI VKG VPG+ K W++V+D+ K Sbjct: 180 STDVERGLIFVKGSVPGS-KGGWLIVKDAVK 209 >gi|319405898|emb|CBI79530.1| 50S ribosomal protein L3 [Bartonella sp. AR 15-3] Length = 246 Score = 261 bits (668), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 133/211 (63%), Positives = 161/211 (76%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT +YN G +PVTVL LD CQVV RT++KNGY AVQ+G G AK+KN Sbjct: 1 MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLDKCQVVAQRTVEKNGYTAVQLGVGLAKIKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ +RG F+ V PK K+ EFRV D+ LL VG+ + +F GQ VDVTG++IGKGF Sbjct: 61 TSQALRGHFAKAVVEPKAKIAEFRVSPDN-LLGVGTEITVEHFVPGQRVDVTGISIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGRVRVTTQNIEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 S D RGLILV+G V G+ K SWILVRD+ K Sbjct: 180 STDVDRGLILVRGSVSGS-KGSWILVRDAIK 209 >gi|254488658|ref|ZP_05101863.1| ribosomal protein L3 [Roseobacter sp. GAI101] gi|214045527|gb|EEB86165.1| ribosomal protein L3 [Roseobacter sp. GAI101] Length = 294 Score = 261 bits (667), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 128/211 (60%), Positives = 159/211 (75%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSGV+A+K+GMT ++ +G++IPVTVL LD QVV RT +++GY AVQ+GAG AKVK Sbjct: 2 LRSGVIAKKMGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTTERDGYTAVQLGAGTAKVKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S PMRG F++ V PK+K+ EFRV + +L VG ++ GQ VDV G +IGKGF Sbjct: 62 TSAPMRGHFAAAKVEPKRKVAEFRVDPEA-MLNVGEEIIADHYFAGQYVDVAGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRATHGVS+SHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 121 AGAMKRHNFGGLRATHGVSVSHRSHGSTGQCQDPGKVFKGKKMAGHMGSARVTTQNLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RGLI+VKG VPG+ K W+ V+D+ K Sbjct: 181 KTDTVRGLIMVKGAVPGS-KGGWVTVKDAVK 210 >gi|77462259|ref|YP_351763.1| 50S ribosomal protein L3 [Rhodobacter sphaeroides 2.4.1] gi|126461135|ref|YP_001042249.1| 50S ribosomal protein L3 [Rhodobacter sphaeroides ATCC 17029] gi|221638113|ref|YP_002524375.1| 50S ribosomal protein L3 [Rhodobacter sphaeroides KD131] gi|109893550|sp|Q3J5S2|RL3_RHOS4 RecName: Full=50S ribosomal protein L3 gi|77386677|gb|ABA77862.1| LSU ribosomal protein L3P [Rhodobacter sphaeroides 2.4.1] gi|126102799|gb|ABN75477.1| LSU ribosomal protein L3P [Rhodobacter sphaeroides ATCC 17029] gi|221158894|gb|ACL99873.1| 50S ribosomal protein L3 [Rhodobacter sphaeroides KD131] Length = 240 Score = 261 bits (667), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 127/211 (60%), Positives = 160/211 (75%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT ++ +G+++PVTVL LD+ QVV RT +K+GY AVQ+GAG AK K Sbjct: 1 MRSGVIAKKLGMTRLFLEDGKQVPVTVLQLDSLQVVAQRTTEKDGYTAVQLGAGAAKAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS RG F+ NV PK+K+ EFRV D L+ VG+ + ++ GQ VD+ G +IGKGF Sbjct: 61 VSAAQRGHFAKANVEPKRKIAEFRVTPDC-LIDVGAEITADHYFAGQFVDIAGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RGLI+VKG VPG+ K W+ ++D+ K Sbjct: 180 RTDSDRGLIMVKGAVPGS-KGGWVTIKDAVK 209 >gi|304321440|ref|YP_003855083.1| 50S ribosomal protein L3 [Parvularcula bermudensis HTCC2503] gi|303300342|gb|ADM09941.1| 50S ribosomal protein L3 [Parvularcula bermudensis HTCC2503] Length = 309 Score = 261 bits (667), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 131/217 (60%), Positives = 163/217 (75%), Gaps = 9/217 (4%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE------ 55 R+GV+A+KLGMT VY EG +P TV+ L+NCQVV HRT +++GY A+Q+GAGE Sbjct: 24 RTGVIAKKLGMTRVYTAEGTHVPCTVVSLENCQVVSHRTEERDGYSALQLGAGEYLNRKG 83 Query: 56 -AKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGM 114 AK+ VSK RG F+ NV+PK+KL EFRV+ D L+ +G+ + ++ GQ VDV G Sbjct: 84 EAKLGRVSKAARGHFAKANVTPKRKLAEFRVETDY-LIEIGASLTAEHYVPGQRVDVVGT 142 Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 +IGKGF+G MKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT Sbjct: 143 SIGKGFAGGMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGDVRVTT 202 Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +NLEV+ D RGLIL+KG VPG+ K SWIL+RD+ K Sbjct: 203 QNLEVIRTDVARGLILLKGAVPGS-KGSWILIRDAVK 238 >gi|312115687|ref|YP_004013283.1| 50S ribosomal protein L3 [Rhodomicrobium vannielii ATCC 17100] gi|311220816|gb|ADP72184.1| 50S ribosomal protein L3 [Rhodomicrobium vannielii ATCC 17100] Length = 236 Score = 261 bits (666), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 125/211 (59%), Positives = 160/211 (75%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ G +PVTVL LD CQV+ HRT + NGY A+QVGAG KVKN Sbjct: 1 MRSGLLAQKVGMTRIFTEAGEHVPVTVLKLDQCQVIAHRTQEANGYTAIQVGAGSRKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++ RG F+ V PK K+ EFRV ++ ++ VG+ + +F GQ VDV G +IGKGF Sbjct: 61 VTRAERGHFAKAQVEPKAKVVEFRVTPEN-VIEVGAELTADHFLAGQFVDVIGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRATHGVSISHRSHGSTG RQDPG+ FK KKMAG MG +RVT +NL+VV Sbjct: 120 AGAMKRWNFGGLRATHGVSISHRSHGSTGNRQDPGKTFKGKKMAGHMGVDRVTTQNLQVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGL+L++G VPGA K W++V+D+ K Sbjct: 180 RTDVERGLLLIRGAVPGA-KGGWVMVKDAVK 209 >gi|89053074|ref|YP_508525.1| 50S ribosomal protein L3 [Jannaschia sp. CCS1] gi|109893433|sp|Q28UW2|RL3_JANSC RecName: Full=50S ribosomal protein L3 gi|88862623|gb|ABD53500.1| LSU ribosomal protein L3P [Jannaschia sp. CCS1] Length = 290 Score = 261 bits (666), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 128/211 (60%), Positives = 158/211 (74%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSGV+A+K+GMT ++ +G++IPVTVL LD QVV +T D +GY AVQ+GAG AK K Sbjct: 2 LRSGVIAKKVGMTRLFMEDGKQIPVTVLQLDKLQVVAKKTSDSDGYSAVQLGAGTAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S PMRG F+ +V PK+KL EFRV D+ L+ VG ++ GQ VDVTG +IGKGF Sbjct: 62 TSAPMRGVFAKASVEPKRKLVEFRVDADN-LIEVGEEIIADHYFEGQFVDVTGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPGRVFK KKMAG MG RVT +NL++V Sbjct: 121 QGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGRVFKGKKMAGHMGAARVTTQNLQIV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RGLI++KG VPG+ K W+ V+D+ K Sbjct: 181 RTDTDRGLIMIKGAVPGS-KGGWVTVKDAVK 210 >gi|121601833|ref|YP_988997.1| 50S ribosomal protein L3 [Bartonella bacilliformis KC583] gi|121602668|ref|YP_988967.1| 50S ribosomal protein L3 [Bartonella bacilliformis KC583] gi|212288247|sp|A1USL4|RL3_BARBK RecName: Full=50S ribosomal protein L3 gi|120614010|gb|ABM44611.1| ribosomal protein L3 [Bartonella bacilliformis KC583] gi|120614845|gb|ABM45446.1| ribosomal protein L3 [Bartonella bacilliformis KC583] Length = 246 Score = 261 bits (666), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 130/211 (61%), Positives = 160/211 (75%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+ +KLGMT +YN G R+PVTVL L+NCQV+ RT++KNGY AVQ+G G AK + Sbjct: 1 MRSGVITQKLGMTSIYNDTGERVPVTVLRLENCQVIAQRTVEKNGYTAVQLGVGLAKFEK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK +RG FS V PK K+ EFRV D+LL VG+ + +F GQ VDVTG +IGKGF Sbjct: 61 TSKALRGHFSKALVEPKAKIVEFRVS-SDNLLDVGTEITVEHFVPGQRVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNVEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 S+D RGLILV+G V G+ K +W+LVRD+ K Sbjct: 180 SIDVDRGLILVRGAVSGS-KGAWVLVRDAVK 209 >gi|148260939|ref|YP_001235066.1| 50S ribosomal protein L3 [Acidiphilium cryptum JF-5] gi|212288245|sp|A5FZW5|RL3_ACICJ RecName: Full=50S ribosomal protein L3 gi|146402620|gb|ABQ31147.1| LSU ribosomal protein L3P [Acidiphilium cryptum JF-5] Length = 227 Score = 261 bits (666), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 124/213 (58%), Positives = 164/213 (76%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+KLGMT ++ +G +PVTVLH+D+ +VV RT +++GY AVQ+G G AK KN Sbjct: 4 MRTGIIAKKLGMTRLFREDGTHVPVTVLHMDDVRVVAARTKERDGYAAVQLGFGHAKTKN 63 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+G F++ V P +L EFRV DD +L G V S ++FTVGQ VDV G++ GKGF Sbjct: 64 VTKPMKGHFAAAKVEPANRLVEFRVA-DDAVLEAGQVLSAAHFTVGQKVDVAGISKGKGF 122 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NF GL A+HGVSISHRS GSTG RQDPG+ FKNKKMAG +GG R+T NLEV Sbjct: 123 AGGMKRWNFRGLEASHGVSISHRSLGSTGNRQDPGKTFKNKKMAGHLGGERITTLNLEVA 182 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++D+ R LI++KG VPGA K+ ++LVRD+ K+A Sbjct: 183 AIDEARNLIMIKGAVPGA-KDGYVLVRDAVKTA 214 >gi|163733828|ref|ZP_02141270.1| ribosomal protein L3 [Roseobacter litoralis Och 149] gi|161392939|gb|EDQ17266.1| ribosomal protein L3 [Roseobacter litoralis Och 149] Length = 286 Score = 260 bits (664), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 128/211 (60%), Positives = 161/211 (76%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSGV+A+K+GMT ++ +G++IPVTVL LD QVV RT DK+GY AVQ+GAG AK K Sbjct: 2 LRSGVIAKKVGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTSDKDGYSAVQLGAGTAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ MRG F++ V PK+K+ EFRV ++ L+ VG + +++ GQ VDV G +IGKGF Sbjct: 62 TSQAMRGHFAAAKVEPKRKVAEFRVDAEN-LIGVGEEITANHYFEGQFVDVAGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RGLI+VKG VPG+ K W+ V+D+ K Sbjct: 181 RTDADRGLIMVKGAVPGS-KGGWVTVKDAVK 210 >gi|94498476|ref|ZP_01305032.1| ribosomal protein L3 [Sphingomonas sp. SKA58] gi|94422019|gb|EAT07064.1| ribosomal protein L3 [Sphingomonas sp. SKA58] Length = 252 Score = 260 bits (664), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 128/211 (60%), Positives = 160/211 (75%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR +PVTVL L+ QVV + D++GY+AVQ+GAG AKVKN Sbjct: 2 MRTGVIAKKVGMTRLFQEDGRHVPVTVLALEGNQVVARKETDRDGYIAVQLGAGVAKVKN 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP RG F+ V PK +L EFRV +D LL VG+ + +F GQLVDV G T GKGF Sbjct: 62 VAKPQRGQFAKAEVEPKARLVEFRV-AEDALLDVGAEIAADHFVAGQLVDVAGHTQGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG T +NLE+V Sbjct: 121 AGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRERTQQNLEIV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGL+ VKG VPGA K +W+ V+D+ K Sbjct: 181 RTDVERGLLFVKGSVPGA-KGTWLTVKDAVK 210 >gi|84503642|ref|ZP_01001680.1| 50S ribosomal protein L3 [Oceanicola batsensis HTCC2597] gi|84387939|gb|EAQ00991.1| 50S ribosomal protein L3 [Oceanicola batsensis HTCC2597] Length = 290 Score = 260 bits (664), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 125/211 (59%), Positives = 161/211 (76%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSG++A+K+GMT ++ +G+++PVTVL LD QVV RT + +GY AVQ+GAG AK K Sbjct: 2 LRSGIIAKKIGMTRLFMEDGKQVPVTVLQLDKLQVVAQRTAEAHGYTAVQLGAGTAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F++ +V PK+K+ EFRV D+ L+ VG + ++ GQ VDV G +IGKGF Sbjct: 62 TSKAMRGHFAAASVEPKRKIAEFRVDPDN-LIKVGEEITADHYFEGQFVDVCGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGLI++KG VPG+ K W+ V+D+ K Sbjct: 181 KTDSERGLIMIKGAVPGS-KGGWVTVKDAVK 210 >gi|163796919|ref|ZP_02190876.1| Ribosomal protein L3 [alpha proteobacterium BAL199] gi|159177908|gb|EDP62457.1| Ribosomal protein L3 [alpha proteobacterium BAL199] Length = 249 Score = 259 bits (663), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 130/212 (61%), Positives = 160/212 (75%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT V+ EG +PVTVL +D CQVV RT DK+GY AVQ+G G K K+ Sbjct: 1 MRSGMIAQKVGMTRVFTDEGTHVPVTVLKVDGCQVVSVRTQDKDGYTAVQLGVGVRKPKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KPMRG F+ V PK+KL EFRV +D LL VG+ S +F GQ VDVTG +IGKGF Sbjct: 61 TTKPMRGHFAKAGVEPKRKLVEFRVT-EDALLDVGAELSVEHFVAGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNF GLRA+HGVS+SHRSHGSTG QDPGRV+K KKMAG MG RVT +NL +V Sbjct: 120 AGAMKRHNFSGLRASHGVSLSHRSHGSTGNNQDPGRVWKGKKMAGHMGDVRVTTQNLVIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 S D +RGLILV+G VPG+ W+L+ D+ K+ Sbjct: 180 STDAERGLILVRGAVPGS-DGGWVLLSDAVKA 210 >gi|255263954|ref|ZP_05343296.1| 50S ribosomal protein L3 [Thalassiobium sp. R2A62] gi|255106289|gb|EET48963.1| 50S ribosomal protein L3 [Thalassiobium sp. R2A62] Length = 292 Score = 259 bits (663), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 125/214 (58%), Positives = 163/214 (76%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSG++A+K+GMT ++ +G++IPVTVL LD QVV RT + +GY AVQ+GAG AKVK Sbjct: 2 LRSGIIAKKVGMTRIFQEDGKQIPVTVLQLDKLQVVAQRTQETDGYTAVQLGAGTAKVKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS+ MRG F++ V PK+++ EFRV ++ L+ VG + +++ GQ VDV+G +IGKGF Sbjct: 62 VSQAMRGHFAAAKVEPKRRVAEFRVAAEN-LINVGEEITANHYFEGQFVDVSGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG +VT +NL+VV Sbjct: 121 QGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAAKVTTQNLQVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D RGLI+VKG VPG+ K W+ V+D+ K + Sbjct: 181 KTDAGRGLIMVKGAVPGS-KGGWVTVKDAVKKPI 213 >gi|330993846|ref|ZP_08317778.1| 50S ribosomal protein L3 [Gluconacetobacter sp. SXCC-1] gi|329759114|gb|EGG75626.1| 50S ribosomal protein L3 [Gluconacetobacter sp. SXCC-1] Length = 223 Score = 259 bits (663), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 128/214 (59%), Positives = 162/214 (75%), Gaps = 2/214 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++A+KLGMT ++ +G +PVTVL +D+ QVV RT +++GY AVQ+GAG+AKVKNVSKP Sbjct: 1 MIAKKLGMTRLFKEDGTHVPVTVLQVDDLQVVDVRTTERDGYTAVQLGAGKAKVKNVSKP 60 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 RG F+ V PKKKL EFRV DD +L VG+ S ++F GQ VDVTG + GKGF+GAM Sbjct: 61 NRGHFAKAKVEPKKKLAEFRVA-DDSVLEVGASLSAAHFVAGQKVDVTGTSKGKGFAGAM 119 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR NF GL ATHGVSISHRSHGSTG RQDPG+VFKNKKMAG +G RVT NLE+ +VD Sbjct: 120 KRWNFAGLEATHGVSISHRSHGSTGNRQDPGKVFKNKKMAGHLGSERVTTLNLEIAAVDA 179 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 ++ LI+++G VPG KN +LVRD+ K A + + Sbjct: 180 EKNLIMIRGSVPGG-KNETVLVRDAIKKARHAEA 212 >gi|83854978|ref|ZP_00948508.1| 50S ribosomal protein L3 [Sulfitobacter sp. NAS-14.1] gi|83842821|gb|EAP81988.1| 50S ribosomal protein L3 [Sulfitobacter sp. NAS-14.1] Length = 280 Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 128/211 (60%), Positives = 158/211 (74%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSGV+A+K+GMT ++ +G++IPVTVL LD QVV RT +K+GY AVQ+GAG AK K Sbjct: 2 LRSGVIAKKMGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTPEKDGYTAVQLGAGTAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ MRG F++ V PK+K+ EFRV + +L VG ++ GQ VDV G +IGKGF Sbjct: 62 TSQAMRGHFAAAKVEPKRKVAEFRVDPEA-MLNVGEEIIADHYFAGQYVDVAGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RGLI+VKG VPG+ K W+ V+D+ K Sbjct: 181 KTDSARGLIMVKGAVPGS-KGGWVTVKDAVK 210 >gi|83941500|ref|ZP_00953962.1| 50S ribosomal protein L3 [Sulfitobacter sp. EE-36] gi|83847320|gb|EAP85195.1| 50S ribosomal protein L3 [Sulfitobacter sp. EE-36] Length = 280 Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 128/211 (60%), Positives = 158/211 (74%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSGV+A+K+GMT ++ +G++IPVTVL LD QVV RT +K+GY AVQ+GAG AK K Sbjct: 2 LRSGVIAKKMGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTPEKDGYTAVQLGAGTAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ MRG F++ V PK+K+ EFRV + +L VG ++ GQ VDV G +IGKGF Sbjct: 62 TSQAMRGHFAAAKVEPKRKVAEFRVDPEA-MLNVGEEIIADHYFAGQYVDVAGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RGLI+VKG VPG+ K W+ V+D+ K Sbjct: 181 KTDSARGLIMVKGAVPGS-KGGWVTVKDAVK 210 >gi|159042832|ref|YP_001531626.1| 50S ribosomal protein L3 [Dinoroseobacter shibae DFL 12] gi|226725165|sp|A8LM48|RL3_DINSH RecName: Full=50S ribosomal protein L3 gi|157910592|gb|ABV92025.1| 50S ribosomal protein L3 [Dinoroseobacter shibae DFL 12] Length = 279 Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 125/214 (58%), Positives = 163/214 (76%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT ++ +G+++PVTVL LD QVV RT +K+GY AVQ+GAG AK K Sbjct: 1 MRSGVIAKKVGMTRLFMEDGKQVPVTVLQLDKLQVVAQRTAEKDGYSAVQLGAGTAKAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +K MRG F++ +V PK+K+ EFRV ++L+ VG + ++ GQ VDV+G +IGKGF Sbjct: 61 TTKAMRGHFAAASVEPKRKVAEFRVA-PENLINVGEEITADHYFEGQYVDVSGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D RGLI++KG VPG+ K W+ ++D+ K V Sbjct: 180 RTDADRGLIMIKGAVPGS-KGGWVTIKDAVKKPV 212 >gi|326404337|ref|YP_004284419.1| 50S ribosomal protein L3 [Acidiphilium multivorum AIU301] gi|325051199|dbj|BAJ81537.1| 50S ribosomal protein L3 [Acidiphilium multivorum AIU301] Length = 225 Score = 259 bits (662), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 123/213 (57%), Positives = 164/213 (76%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+KLGMT ++ +G +PVTVLH+D+ +VV RT +++GY AVQ+G G AK KN Sbjct: 2 MRTGIIAKKLGMTRLFREDGTHVPVTVLHMDDVRVVAARTKERDGYAAVQLGFGHAKTKN 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+G F++ V P +L EFRV DD +L G V S ++FTVGQ VDV G++ GKGF Sbjct: 62 VTKPMKGHFAAAKVEPANRLVEFRVA-DDAVLEAGQVLSAAHFTVGQKVDVAGISKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NF GL A+HGVSISHRS GSTG RQDPG+ F+NKKMAG +GG R+T NLEV Sbjct: 121 AGGMKRWNFRGLEASHGVSISHRSLGSTGNRQDPGKTFRNKKMAGHLGGERITTLNLEVA 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++D+ R LI++KG VPGA K+ ++LVRD+ K+A Sbjct: 181 AIDEARNLIMIKGAVPGA-KDGYVLVRDAVKTA 212 >gi|307294974|ref|ZP_07574816.1| 50S ribosomal protein L3 [Sphingobium chlorophenolicum L-1] gi|306879448|gb|EFN10666.1| 50S ribosomal protein L3 [Sphingobium chlorophenolicum L-1] Length = 251 Score = 259 bits (661), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 128/211 (60%), Positives = 160/211 (75%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR IPVTVL L+ QVV + ++++GY+AVQ+GAG AKVKN Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHIPVTVLALEGNQVVARKEVERDGYVAVQLGAGVAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP RG F+ V PK +L EFRV +D LL VG+ + +F GQLVDV G T GKGF Sbjct: 61 VAKPQRGHFAKAEVEPKARLVEFRV-AEDALLDVGAEIAADHFIAGQLVDVAGHTQGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG T +NLE+V Sbjct: 120 AGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRERTQQNLEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGL+ VKG VPGA K +W+ V D+ K Sbjct: 180 RTDVERGLLFVKGSVPGA-KGTWLTVSDAVK 209 >gi|328543358|ref|YP_004303467.1| 50S ribosomal protein L3 [Polymorphum gilvum SL003B-26A1] gi|326413103|gb|ADZ70166.1| 50S ribosomal protein L3 [Polymorphum gilvum SL003B-26A1] Length = 227 Score = 259 bits (661), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 127/205 (61%), Positives = 155/205 (75%), Gaps = 2/205 (0%) Query: 10 LGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFF 69 +GMT +YN G +PVTVL L+ CQVV HRT +KNGY A+Q+GAG AKVKN K MRG F Sbjct: 1 MGMTRIYNDAGEHVPVTVLRLEKCQVVAHRTEEKNGYTALQLGAGAAKVKNTPKAMRGHF 60 Query: 70 SSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129 + V PK+ + EFRV +D+ L+ VG+ + ++ GQ VDVTG +IGKGF+G MKRHNF Sbjct: 61 AVAKVEPKRTIAEFRVSQDN-LIDVGAEITADHYVAGQYVDVTGTSIGKGFAGVMKRHNF 119 Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLI 189 GG RATHG S+SHRSHGSTG RQDPG+VFK KKMAG MG RVT +NL+VV D +RGLI Sbjct: 120 GGGRATHGNSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDVRVTTQNLKVVRTDVERGLI 179 Query: 190 LVKGCVPGAKKNSWILVRDSFKSAV 214 +V+G VPGA K WILVRD+ K A+ Sbjct: 180 MVEGSVPGA-KGGWILVRDAVKKAL 203 >gi|260577181|ref|ZP_05845158.1| ribosomal protein L3 [Rhodobacter sp. SW2] gi|259020655|gb|EEW23974.1| ribosomal protein L3 [Rhodobacter sp. SW2] Length = 241 Score = 258 bits (660), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 123/214 (57%), Positives = 161/214 (75%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT ++ +G+++PVTVL LD QVV RT +++GY AVQ+GAG AK K Sbjct: 1 MRSGVIAKKLGMTRLFLEDGKQVPVTVLQLDALQVVAQRTAERDGYTAVQLGAGAAKAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + MRG F++ NV+PK+K+ EFRV D+ L+ VG+ + ++ GQ VD+ G +IGKGF Sbjct: 61 TTAGMRGHFAAANVAPKRKIAEFRVSPDN-LIDVGAEITADHYLAGQFVDIAGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GAMKRHNFGGLRA+HGVS+SHRSHGSTG QDPG+VFK KKMAG MG R T +NL+VV Sbjct: 120 QGAMKRHNFGGLRASHGVSVSHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRCTTQNLQVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D RGLI++KG VPG+ K W+ ++D+ K A Sbjct: 180 RTDADRGLIMIKGAVPGS-KGGWVTIKDAVKKAA 212 >gi|119383511|ref|YP_914567.1| 50S ribosomal protein L3 [Paracoccus denitrificans PD1222] gi|166233172|sp|A1B027|RL3_PARDP RecName: Full=50S ribosomal protein L3 gi|119373278|gb|ABL68871.1| LSU ribosomal protein L3P [Paracoccus denitrificans PD1222] Length = 245 Score = 258 bits (660), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 121/211 (57%), Positives = 164/211 (77%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+GV+A+KLGMT ++ +GR++PVTVLH+DN QV+ RT +++GY+A+Q+GAGEAK K Sbjct: 2 LRTGVIAKKLGMTRLFLEDGRQVPVTVLHVDNVQVIAQRTAEQDGYVALQLGAGEAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + +RG F+ NV+PK+K+ EFRV ++L+ VG ++ GQ VD+ G +IGKGF Sbjct: 62 TTAALRGHFAKANVAPKRKIAEFRVS-PENLVEVGEEIVADHYFEGQYVDIAGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG +G RVT +NL+VV Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHLGAVRVTTQNLQVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGLI+VKG VPG+ K W+ ++D+ K Sbjct: 181 KTDAERGLIMVKGSVPGS-KGGWVTIKDAVK 210 >gi|260752974|ref|YP_003225867.1| 50S ribosomal protein L3 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552337|gb|ACV75283.1| ribosomal protein L3 [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 242 Score = 258 bits (659), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 126/213 (59%), Positives = 163/213 (76%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR +PVTVL L++ QVV + D++GY+AVQ+GAG AK KN Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHVPVTVLKLEDVQVVAVKNKDQDGYVAVQLGAGSAKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP+RG F+ V K KL EF V +D +L VG+ S +F GQLVD++G T GKGF Sbjct: 61 VTKPVRGHFAKAEVELKAKLVEFPVS-EDAVLEVGTSISADHFIAGQLVDISGQTQGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR FGGLRATHGVS+SHRSHGSTG RQDPGRVFKNKKMAG MG + T +NLEV+ Sbjct: 120 AGAMKRWGFGGLRATHGVSLSHRSHGSTGNRQDPGRVFKNKKMAGHMGARQRTQQNLEVI 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 S D +R LI V+G VPG+ K +W+++RD+ K A Sbjct: 180 STDAERDLIFVRGSVPGS-KGAWLIIRDAVKVA 211 >gi|56551413|ref|YP_162252.1| 50S ribosomal protein L3 [Zymomonas mobilis subsp. mobilis ZM4] gi|241761060|ref|ZP_04759149.1| ribosomal protein L3 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|81820917|sp|Q5NQ64|RL3_ZYMMO RecName: Full=50S ribosomal protein L3 gi|56542987|gb|AAV89141.1| ribosomal protein L3 [Zymomonas mobilis subsp. mobilis ZM4] gi|241374679|gb|EER64140.1| ribosomal protein L3 [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 242 Score = 258 bits (658), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 126/213 (59%), Positives = 163/213 (76%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR +PVTVL L++ QVV + D++GY+AVQ+GAG AK KN Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHVPVTVLKLEDVQVVAVKNKDQDGYVAVQLGAGSAKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP+RG F+ V K KL EF V +D +L VG+ S +F GQLVD++G T GKGF Sbjct: 61 VTKPVRGHFAKAEVELKAKLVEFPVS-EDAVLEVGTSISADHFIAGQLVDISGQTQGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR FGGLRATHGVS+SHRSHGSTG RQDPGRVFKNKKMAG MG + T +NLEV+ Sbjct: 120 AGAMKRWGFGGLRATHGVSLSHRSHGSTGNRQDPGRVFKNKKMAGHMGARQRTQQNLEVI 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 S D +R LI V+G VPG+ K +W+++RD+ K A Sbjct: 180 STDAERDLIFVRGSVPGS-KGAWLIIRDAVKVA 211 >gi|144900884|emb|CAM77748.1| 50S ribosomal protein L3 [Magnetospirillum gryphiswaldense MSR-1] Length = 230 Score = 258 bits (658), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 128/211 (60%), Positives = 163/211 (77%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ +G +PVTVL +D QVV R+++K+GY AVQ+GAG AKVKN Sbjct: 1 MRSGLIAQKVGMTRIFTEDGTHVPVTVLKVDTVQVVSTRSVEKDGYTAVQLGAGTAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K R F++ V PKKKL EFRV +++L VG S ++F GQ VD+TG TIGKGF Sbjct: 61 VAKAQRTTFANAKVEPKKKLVEFRVA-PENVLEVGVELSAAHFIPGQFVDITGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NF GL ATHGVS+SHRSHGSTG RQDPG+VFK KKMAG MG +VT +NL+VV Sbjct: 120 AGGMKRWNFRGLEATHGVSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDEQVTTQNLKVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 S D +RGLILVKG VPG+ + SW+LV+D+ K Sbjct: 180 STDVERGLILVKGSVPGS-EGSWVLVKDAVK 209 >gi|254470259|ref|ZP_05083663.1| ribosomal protein L3 [Pseudovibrio sp. JE062] gi|211960570|gb|EEA95766.1| ribosomal protein L3 [Pseudovibrio sp. JE062] Length = 227 Score = 258 bits (658), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 124/203 (61%), Positives = 156/203 (76%), Gaps = 2/203 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT +YN G +PVTVL LDNCQVV HRT +KNGY A+Q+G G AKVKN ++ MRG F+ Sbjct: 1 MTRIYNEAGEHVPVTVLRLDNCQVVAHRTAEKNGYTALQLGVGAAKVKNTNRAMRGHFAV 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 V PK+KL EFRV +++++ VG+ + +F GQ VDVTG +IGKGF+GAMKRHNFGG Sbjct: 61 AKVEPKRKLAEFRVS-EENMIEVGAELTADHFLNGQFVDVTGTSIGKGFAGAMKRHNFGG 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 RA+HGVSISHR+HGSTG QDPG+VFK KKMAG +G RVT +NL+VV D +RGLI+V Sbjct: 120 GRASHGVSISHRAHGSTGQCQDPGKVFKGKKMAGHLGAERVTTQNLKVVRTDVERGLIMV 179 Query: 192 KGCVPGAKKNSWILVRDSFKSAV 214 +G VPG+ K WILVRD+ K ++ Sbjct: 180 EGSVPGS-KGGWILVRDAIKKSL 201 >gi|110678718|ref|YP_681725.1| ribosomal protein L3 [Roseobacter denitrificans OCh 114] gi|123362126|sp|Q16AF4|RL3_ROSDO RecName: Full=50S ribosomal protein L3 gi|109454834|gb|ABG31039.1| ribosomal protein L3 [Roseobacter denitrificans OCh 114] Length = 286 Score = 257 bits (656), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 126/211 (59%), Positives = 161/211 (76%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSGV+A+K+GMT ++ +G++IPVTVL LD QVV RT +K+GY AVQ+GAG AK K Sbjct: 2 LRSGVIAKKVGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTSEKDGYSAVQLGAGTAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ MRG F++ V PK+K+ EFRV ++L+ VG + +++ GQ VDV G +IGKGF Sbjct: 62 TSQAMRGHFAAAKVEPKRKVAEFRVD-PENLIGVGEEITANHYFEGQFVDVAGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RGLI+VKG VPG+ K W+ V+D+ K Sbjct: 181 RTDANRGLIMVKGAVPGS-KGGWVTVKDAVK 210 >gi|294010613|ref|YP_003544073.1| ribosomal protein L3 [Sphingobium japonicum UT26S] gi|292673943|dbj|BAI95461.1| ribosomal protein L3 [Sphingobium japonicum UT26S] Length = 251 Score = 256 bits (655), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 128/211 (60%), Positives = 160/211 (75%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR IPVTVL L+ QVV + ++++GY+AVQ+GAG AKVKN Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHIPVTVLALEGNQVVARKEVERDGYVAVQLGAGVAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP RG F+ V PK +L EFRV +D LL VG+ + +F GQLVDV G T GKGF Sbjct: 61 VAKPQRGHFAKAEVEPKARLVEFRV-AEDALLDVGAEIAADHFIAGQLVDVAGHTQGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG T +NLE+V Sbjct: 120 AGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRERTQQNLEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGL+ VKG VPGA K +W+ V D+ K Sbjct: 180 RTDVERGLLFVKGSVPGA-KGTWLTVCDAVK 209 >gi|83594020|ref|YP_427772.1| 50S ribosomal protein L3 [Rhodospirillum rubrum ATCC 11170] gi|109893549|sp|Q2RQW0|RL3_RHORT RecName: Full=50S ribosomal protein L3 gi|83576934|gb|ABC23485.1| LSU ribosomal protein L3P [Rhodospirillum rubrum ATCC 11170] Length = 235 Score = 256 bits (654), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 129/211 (61%), Positives = 158/211 (74%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ EG +PVTVL ++ CQVV RT + +GY AVQ+GAG AKVK Sbjct: 1 MRSGLIAQKVGMTRLFTDEGTHVPVTVLKVEACQVVAVRTSETDGYTAVQLGAGVAKVKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F++ V PKKK+ EFRV +D LL G+ S ++F GQ VD+ G TIGKGF Sbjct: 61 TSKAMRGHFAAAKVEPKKKVVEFRVS-EDCLLEPGAELSAAHFVAGQKVDIAGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNF GL ATHGVS+SHRSHGSTG QDPGRVFK KKMAG MG R+T ++L VV Sbjct: 120 AGAMKRHNFRGLEATHGVSVSHRSHGSTGQCQDPGRVFKGKKMAGHMGDTRITQQSLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 + D RGLILVKG VPGA +W+ VRD+ K Sbjct: 180 ATDADRGLILVKGSVPGA-DGAWLEVRDAVK 209 >gi|126736644|ref|ZP_01752384.1| ribosomal protein L3 [Roseobacter sp. CCS2] gi|126713957|gb|EBA10828.1| ribosomal protein L3 [Roseobacter sp. CCS2] Length = 283 Score = 255 bits (652), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 123/211 (58%), Positives = 161/211 (76%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+G++A+K+GMT ++ +G++IPVTVL L+N QVV RT D NGY AVQ+GAG AK K Sbjct: 2 LRTGLIAKKVGMTRLFMEDGKQIPVTVLSLENLQVVAQRTADTNGYTAVQLGAGNAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F++ V PK+K+ EFRV ++ ++ VG + +++ GQ VDV G +IGKGF Sbjct: 62 TSKAMRGHFAAAKVEPKRKVAEFRVAPEN-MINVGETLTANHYFEGQYVDVCGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG +VT +NL+VV Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAAKVTTQNLQVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RG+I+VKG VPG+ K W+ ++D+ K Sbjct: 181 KTDADRGVIMVKGAVPGS-KGGWVTIKDAVK 210 >gi|114327218|ref|YP_744375.1| 50S ribosomal protein L3 [Granulibacter bethesdensis CGDNIH1] gi|122327802|sp|Q0BUQ0|RL3_GRABC RecName: Full=50S ribosomal protein L3 gi|114315392|gb|ABI61452.1| LSU ribosomal protein L3P [Granulibacter bethesdensis CGDNIH1] Length = 231 Score = 255 bits (652), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 127/211 (60%), Positives = 160/211 (75%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++ARKLGMT ++ +G +PVTVLHLD QVV RT +++GY AVQ+G G+AK K+ Sbjct: 1 MRTGLIARKLGMTRLFKEDGTHVPVTVLHLDQVQVVDTRTKERDGYTAVQLGFGQAKPKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK +G F+ V V PKKKL EFRV +D L P G+ S +F VGQ VDVTG + GKGF Sbjct: 61 VSKANKGHFARVKVEPKKKLVEFRVAEDAILEP-GATLSAEHFLVGQKVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NF GL A+HGVSISHRSHGSTG RQDPG+ FKNKKMAG +G RVT +N+EV Sbjct: 120 AGAMKRWNFAGLEASHGVSISHRSHGSTGNRQDPGKTFKNKKMAGHLGDERVTTQNVEVA 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD RGL++++G +PGA K ++LVRD+ K Sbjct: 180 HVDAARGLLMIRGSIPGA-KGGYVLVRDAVK 209 >gi|114771269|ref|ZP_01448689.1| 50S ribosomal protein L3 [alpha proteobacterium HTCC2255] gi|114548194|gb|EAU51081.1| 50S ribosomal protein L3 [alpha proteobacterium HTCC2255] Length = 247 Score = 255 bits (652), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 126/211 (59%), Positives = 159/211 (75%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT ++ +G+++PVTVL ++N QVV RT + +GY AVQ+GAG AK K Sbjct: 1 MRSGVIAKKIGMTRLFMEDGKQVPVTVLQMENLQVVSQRTNETDGYTAVQLGAGVAKAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S MRG F+ V PK+K+ EFRV D+ L+ VG ++F GQ VDV+G +IGKGF Sbjct: 61 QSAAMRGHFAKAKVEPKRKIAEFRVSADN-LIEVGEEIVANHFLDGQKVDVSGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRATHGVS+SHRSHGSTG Q+PG+VFK KKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRHNFGGLRATHGVSVSHRSHGSTGQCQEPGKVFKGKKMAGHMGSARVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RGLI++KG VPG+ K W+ V+DS K Sbjct: 180 RTDIDRGLIMIKGAVPGS-KGGWVTVKDSVK 209 >gi|91977652|ref|YP_570311.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris BisB5] gi|123748930|sp|Q134S9|RL3_RHOPS RecName: Full=50S ribosomal protein L3 gi|91684108|gb|ABE40410.1| LSU ribosomal protein L3P [Rhodopseudomonas palustris BisB5] Length = 241 Score = 254 bits (650), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 129/214 (60%), Positives = 157/214 (73%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G IPVTVL L NCQVV HRT +KNGY+A+Q+G+G K Sbjct: 1 MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLGNCQVVAHRTTEKNGYVALQLGSGARKTVY 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + K RG F+ V PK+K+ EFRV +D L+PVG+ +F VGQ VDVTG + GKGF Sbjct: 61 MPKAERGQFAVAKVEPKRKVAEFRVS-EDALIPVGAEIQADHFVVGQFVDVTGTSTGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T NL VV Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D +RGLILV+G VPG+ K WI VRD+ K A+ Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWISVRDAVKKAL 212 >gi|149203511|ref|ZP_01880481.1| 50S ribosomal protein L3 [Roseovarius sp. TM1035] gi|149143344|gb|EDM31383.1| 50S ribosomal protein L3 [Roseovarius sp. TM1035] Length = 280 Score = 254 bits (649), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 122/211 (57%), Positives = 160/211 (75%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSGV+A+K+GMT ++ +G+++PVTVL LD QVV RT +K+GY AVQ+GAG AK K Sbjct: 2 LRSGVIAKKVGMTRLFLEDGKQVPVTVLQLDKLQVVAQRTPEKDGYTAVQLGAGTAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++ MRG F++ V PK+K+ EFRV + L+ VG + ++ GQ VDV+G +IGKGF Sbjct: 62 TTQAMRGHFAAAKVEPKRKIAEFRV-APEALINVGEEITADHYFEGQFVDVSGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RGLI++KG VPG+ K W+ ++D+ K Sbjct: 181 KTDADRGLIMIKGAVPGS-KGGWVTIKDAVK 210 >gi|146340057|ref|YP_001205105.1| 50S ribosomal protein L3 [Bradyrhizobium sp. ORS278] gi|166233121|sp|A4YSJ2|RL3_BRASO RecName: Full=50S ribosomal protein L3 gi|146192863|emb|CAL76868.1| 50S ribosomal subunit protein L3 [Bradyrhizobium sp. ORS278] Length = 239 Score = 254 bits (649), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 129/211 (61%), Positives = 156/211 (73%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G IPVTVL L NCQVV HRT +KNGY+A+Q+G+G K Sbjct: 1 MRSGVIAQKVGMTRVFTETGEHIPVTVLKLGNCQVVGHRTTEKNGYVALQLGSGSRKTVY 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + K RG F+ V PK+KL EFRV +D L+PVG+ +F VGQ VDVTG ++GKGF Sbjct: 61 MPKAERGQFAVAKVEPKRKLAEFRVS-EDSLIPVGAEIQADHFVVGQFVDVTGTSVGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ +KNKKM G MG +R+T NL VV Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTWKNKKMPGHMGVDRITTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGLILV+G VPG+ K WI VRD+ K Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWISVRDAVK 209 >gi|86749415|ref|YP_485911.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris HaA2] gi|109893547|sp|Q2IXR0|RL3_RHOP2 RecName: Full=50S ribosomal protein L3 gi|86572443|gb|ABD07000.1| LSU ribosomal protein L3P [Rhodopseudomonas palustris HaA2] Length = 241 Score = 254 bits (648), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 128/214 (59%), Positives = 159/214 (74%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G IPVTVL L NCQV+ HRT +KNGY+A+Q+G+G K Sbjct: 1 MRSGVIAQKVGMTRVFTETGEHIPVTVLKLGNCQVLAHRTTEKNGYVALQLGSGARKTVY 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + K RG F+ V PK+K+ EFRV +D L+PVG+ +F VGQ VDVTG ++GKGF Sbjct: 61 MPKAERGQFAVAKVEPKRKVAEFRVS-EDALIPVGAEIQADHFVVGQFVDVTGTSVGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T NL VV Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 +D +RGLILV+G VPG+ K WI VRD+ K A+ Sbjct: 180 QLDVERGLILVEGAVPGS-KGGWISVRDAVKKAL 212 >gi|39936313|ref|NP_948589.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris CGA009] gi|192292037|ref|YP_001992642.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris TIE-1] gi|316933527|ref|YP_004108509.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris DX-1] gi|42559577|sp|P60456|RL3_RHOPA RecName: Full=50S ribosomal protein L3; AltName: Full=RRP-L3 gi|226730557|sp|B3QBY0|RL3_RHOPT RecName: Full=50S ribosomal protein L3 gi|39650168|emb|CAE28691.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris CGA009] gi|192285786|gb|ACF02167.1| ribosomal protein L3 [Rhodopseudomonas palustris TIE-1] gi|315601241|gb|ADU43776.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris DX-1] Length = 241 Score = 253 bits (647), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 131/214 (61%), Positives = 157/214 (73%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G IPVTVL L NCQV+ HRT +KNGY+A+QVG+G K Sbjct: 1 MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLGNCQVLGHRTKEKNGYVALQVGSGSRKTVY 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + K RG F++ V PK+K+ EFRV +D LLPVG+ +F VGQ VDVTG + GKGF Sbjct: 61 MPKAERGQFAAAKVEPKRKVEEFRVS-EDALLPVGAEIQADHFVVGQFVDVTGTSTGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +RVT NL VV Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRVTTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D +RGLILV+G VPG K WI VRD+ K A+ Sbjct: 180 QTDVERGLILVEGAVPGT-KGGWIRVRDAVKKAL 212 >gi|254294440|ref|YP_003060463.1| ribosomal protein L3 [Hirschia baltica ATCC 49814] gi|254042971|gb|ACT59766.1| ribosomal protein L3 [Hirschia baltica ATCC 49814] Length = 243 Score = 253 bits (647), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 129/214 (60%), Positives = 160/214 (74%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+KLGMT V+ +G IPVTVL LD CQVV RT +++GY+A+Q+GAG K KN Sbjct: 1 MRTGLLAKKLGMTRVFGEDGAHIPVTVLQLDGCQVVGQRTKERDGYVALQLGAGSRKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPMRG F++ V PK L EFRV +D L+ VG+ FS +F GQ VD+ G GKGF Sbjct: 61 VTKPMRGQFAAAKVEPKAVLREFRVD-EDMLVDVGAEFSAEHFVPGQKVDIAGTAKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRA+HGVSISHR+ GSTG QDPG+VFK KKMAG+ G R+T +N+EVV Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRALGSTGQCQDPGKVFKGKKMAGQYGNVRITTQNIEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 VD RGL+LVKG VP A KN W+ VRD+ K A Sbjct: 180 RVDADRGLVLVKGAVPSA-KNGWVEVRDAVKKAA 212 >gi|85703987|ref|ZP_01035090.1| 50S ribosomal protein L3 [Roseovarius sp. 217] gi|85671307|gb|EAQ26165.1| 50S ribosomal protein L3 [Roseovarius sp. 217] Length = 280 Score = 253 bits (647), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 119/211 (56%), Positives = 161/211 (76%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSGV+A+K+GMT ++ +G+++PVTVL LD QVV RT +K+GY AVQ+GAG AK K Sbjct: 2 LRSGVIAKKVGMTRLFLEDGKQVPVTVLQLDKLQVVAQRTPEKDGYTAVQLGAGTAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++ MRG F++ V PK+K+ EFRV ++++ VG + ++ GQ VDV+G +IGKGF Sbjct: 62 TTQAMRGHFAAAKVEPKRKIAEFRVA-PENMINVGEEITADHYFEGQFVDVSGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG +VT +NL+V+ Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAAKVTTQNLQVI 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RGLI++KG VPG+ K W+ ++D+ K Sbjct: 181 KTDADRGLIMIKGAVPGS-KGGWVTIKDAVK 210 >gi|126732274|ref|ZP_01748074.1| ribosomal protein L3 [Sagittula stellata E-37] gi|126707143|gb|EBA06209.1| ribosomal protein L3 [Sagittula stellata E-37] Length = 279 Score = 253 bits (646), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 126/214 (58%), Positives = 158/214 (73%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ +G++IPVTVL LDN QVV RT + NGY AV +G G AK K Sbjct: 1 MRSGVIAKKIGMTRVFMEDGKQIPVTVLQLDNLQVVAQRTDETNGYSAVALGCGTAKAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ MR FS+ V PK+K+ EFRV ++L+ VG ++ GQ VDV+G+TIGKGF Sbjct: 61 TSQAMRKVFSNAGVEPKRKIVEFRV-APENLIEVGEEIIADHYFEGQFVDVSGITIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGGLRATHGVSISHRSHGSTG Q+PG+VFK KKMAG MG RVT +NL+VV Sbjct: 120 AGGMKRHNFGGLRATHGVSISHRSHGSTGQCQNPGKVFKGKKMAGHMGSVRVTTQNLQVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D RG+I++KG VPG K SW+ ++D+ K V Sbjct: 180 RTDSDRGVIMIKGAVPGP-KGSWVTIKDAVKKPV 212 >gi|148256392|ref|YP_001240977.1| 50S ribosomal protein L3 [Bradyrhizobium sp. BTAi1] gi|166233120|sp|A5ELM7|RL3_BRASB RecName: Full=50S ribosomal protein L3 gi|146408565|gb|ABQ37071.1| LSU ribosomal protein L3P [Bradyrhizobium sp. BTAi1] Length = 239 Score = 253 bits (646), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 130/211 (61%), Positives = 156/211 (73%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G IPVTVL L NCQVV HRT +KNGY+A+Q+G+G K Sbjct: 1 MRSGVIAQKVGMTRVFTETGEHIPVTVLKLGNCQVVGHRTTEKNGYVALQLGSGSRKTVY 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + K RG F+ V PK+K+ EFRV +D L+PVG+ +F VGQ VDVTG T+GKGF Sbjct: 61 MPKAERGQFAVAKVEPKRKVAEFRVS-EDSLIPVGAEILADHFVVGQFVDVTGTTVGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ +KNKKM G MG +RVT NL VV Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTWKNKKMPGHMGVDRVTTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGLILV+G VPG+ K WI VRD+ K Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWISVRDAVK 209 >gi|302382618|ref|YP_003818441.1| 50S ribosomal protein L3 [Brevundimonas subvibrioides ATCC 15264] gi|302193246|gb|ADL00818.1| 50S ribosomal protein L3 [Brevundimonas subvibrioides ATCC 15264] Length = 250 Score = 253 bits (646), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 123/211 (58%), Positives = 157/211 (74%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+KLGMT V+ +G+ +PVTVL LD+CQVV RT +++GY+A+Q+GAG K KN Sbjct: 1 MRTGVIAKKLGMTRVFADDGQHVPVTVLQLDDCQVVGQRTQERDGYVALQLGAGTKKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +K R F++ V PK + EFRV DD ++ VG+ S +F VGQ VD+ G TIGKGF Sbjct: 61 TNKAQRTTFATAEVEPKHVVMEFRV-TDDAMIDVGATLSADHFVVGQKVDIQGETIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FK KKMAG++G +T +NL +V Sbjct: 120 QGGMKRWNFGGLRATHGVSVSHRSLGSTGQRQDPGKTFKGKKMAGQLGNETITTQNLTIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +RGLILVKG VPG + SW+ VRD+ K Sbjct: 180 RVDAERGLILVKGAVPG-HEGSWVKVRDAHK 209 >gi|212288598|sp|A5V602|RL3_SPHWW RecName: Full=50S ribosomal protein L3 Length = 251 Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 125/214 (58%), Positives = 156/214 (72%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR +PVTVL L+N QVV R D++GY+AVQ+GAG AK KN Sbjct: 1 MRTGVIAKKMGMTRLFQEDGRHVPVTVLALENVQVVARREQDRDGYVAVQLGAGSAKPKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP RG F V PK + EFRV +D LL VG+ S ++ GQ VD+ G T GKGF Sbjct: 61 LTKPERGHFGKAEVEPKAFVAEFRV-SEDGLLDVGAEISADHYVAGQFVDIQGSTQGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR FGGLRATHGVS+SHRS GSTG RQDPG+VFKNKKMAG MG T +NLE+V Sbjct: 120 AGGMKRWGFGGLRATHGVSVSHRSLGSTGQRQDPGKVFKNKKMAGHMGDKNRTQQNLEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D +RGL+ VKG VPG+ K W+LV+DS K A Sbjct: 180 QTDAERGLLFVKGSVPGS-KGGWLLVKDSVKIAA 212 >gi|51473839|ref|YP_067596.1| 50S ribosomal protein L3 [Rickettsia typhi str. Wilmington] gi|81826293|sp|Q68W78|RL3_RICTY RecName: Full=50S ribosomal protein L3 gi|51460151|gb|AAU04114.1| 50S ribosomal protein L3 [Rickettsia typhi str. Wilmington] Length = 215 Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 115/213 (53%), Positives = 165/213 (77%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+K+GMT V+N +G RI +T++ +D CQVV H+TL K+GY A+ +G + K+ Sbjct: 1 MRTGIIAQKIGMTSVFNDKGERISLTLVKVDGCQVVGHKTLAKHGYNALVIGVKDQKISR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+ F++ +SPK KL EFR+ +D+ + + S+ +F+VGQ VD+T TIGKGF Sbjct: 61 VTKPMKQVFANAKISPKTKLKEFRIS-EDNFIDIASILEVDHFSVGQFVDITATTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++D R LI+++G +PG KNS++LV+D+ K A Sbjct: 180 AIDTNRKLIMIQGSIPG-HKNSYLLVKDAIKKA 211 >gi|149915844|ref|ZP_01904368.1| 30S ribosomal protein S10 [Roseobacter sp. AzwK-3b] gi|149810167|gb|EDM70013.1| 30S ribosomal protein S10 [Roseobacter sp. AzwK-3b] Length = 276 Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 124/211 (58%), Positives = 158/211 (74%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSGV+A+K+GMT ++ +GR++PVTVL LD QVV RT +K+GY AVQ+GAG K K Sbjct: 2 LRSGVIAKKVGMTRLFMEDGRQVPVTVLQLDKLQVVAQRTPEKDGYTAVQLGAGSIKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS+PMRG F+S V PK+K+ EFRV ++++ VG + ++ GQ VDV G +IGKGF Sbjct: 62 VSQPMRGHFASAKVEPKRKIAEFRV-APENMINVGEEITADHYFAGQYVDVCGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNF GL THGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV Sbjct: 121 AGAMKRHNFKGLEMTHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RGLI+VKG VPG+ K W+ ++D+ K Sbjct: 181 KTDADRGLIMVKGAVPGS-KGGWVTIKDAVK 210 >gi|75675556|ref|YP_317977.1| 50S ribosomal protein L3 [Nitrobacter winogradskyi Nb-255] gi|109893531|sp|Q3SSW6|RL3_NITWN RecName: Full=50S ribosomal protein L3 gi|74420426|gb|ABA04625.1| LSU ribosomal protein L3P [Nitrobacter winogradskyi Nb-255] Length = 247 Score = 252 bits (644), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 127/211 (60%), Positives = 157/211 (74%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G IPVTVL L NCQV+ HRT +KNGY+A+Q+G+G K Sbjct: 1 MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLSNCQVLGHRTSEKNGYVALQLGSGARKTVY 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + K RG F+ V+PK+K+ EFRV +D L+PVG+ +F VGQ VDVTG ++GKG+ Sbjct: 61 MPKAERGQFAVAKVAPKRKVAEFRVS-EDSLIPVGAEIQADHFVVGQFVDVTGTSVGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G MG +R+T NL VV Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGLILV+G VPG+ K WI VRD+ K Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWIAVRDAVK 209 >gi|115525585|ref|YP_782496.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris BisA53] gi|122295408|sp|Q07KL8|RL3_RHOP5 RecName: Full=50S ribosomal protein L3 gi|115519532|gb|ABJ07516.1| LSU ribosomal protein L3P [Rhodopseudomonas palustris BisA53] Length = 240 Score = 252 bits (644), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 125/216 (57%), Positives = 159/216 (73%), Gaps = 2/216 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G IPVTVL L NCQV+ HRT +KNGY A+Q+G+G K Sbjct: 1 MRSGVIAQKVGMTRVFTETGEHIPVTVLKLGNCQVLGHRTSEKNGYTALQLGSGSRKTVY 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + K RG F++ V PK+K+ EFRV +D ++P+G+ +F VGQ VDVTG ++GKGF Sbjct: 61 MPKAERGQFAAAKVEPKRKVAEFRVS-EDSMIPIGAEIQADHFVVGQFVDVTGTSVGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T NL VV Sbjct: 120 AGGIKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 +D +RGLILV+G VPG+ K WI VRD+ K A+ Sbjct: 180 QLDVERGLILVEGAVPGS-KGGWIAVRDAVKKALPA 214 >gi|254501408|ref|ZP_05113559.1| ribosomal protein L3 [Labrenzia alexandrii DFL-11] gi|222437479|gb|EEE44158.1| ribosomal protein L3 [Labrenzia alexandrii DFL-11] Length = 232 Score = 252 bits (644), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 125/210 (59%), Positives = 157/210 (74%), Gaps = 2/210 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++A+K+GMT +YN G +PVTVL L+NCQVV HRT +KNGY A+Q+GAG KVKN K Sbjct: 1 MIAQKVGMTRIYNDAGEHVPVTVLRLENCQVVAHRTDEKNGYNALQLGAGTRKVKNTPKA 60 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +RG F+ V PK+ + EFRV ++ ++ VG+ + ++ GQ VDVTG +IGKGF+G M Sbjct: 61 LRGHFAVAKVEPKRTVVEFRVSAEN-MIDVGAEITADHYVEGQFVDVTGTSIGKGFAGVM 119 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHNFGG RA+HG SISHRSHGSTG QDPGRVFK KKMAG MG RVT +NL+VV D Sbjct: 120 KRHNFGGGRASHGNSISHRSHGSTGQCQDPGRVFKGKKMAGHMGDARVTTQNLKVVRTDV 179 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 +RGLI+V+G VPGA K WI VRD+ K A+ Sbjct: 180 ERGLIMVEGSVPGA-KGGWIQVRDAIKKAL 208 >gi|15604505|ref|NP_221023.1| 50S ribosomal protein L3 [Rickettsia prowazekii str. Madrid E] gi|6226691|sp|P48952|RL3_RICPR RecName: Full=50S ribosomal protein L3 gi|3861199|emb|CAA15099.1| 50S RIBOSOMAL PROTEIN L3 (rplC) [Rickettsia prowazekii] gi|292572287|gb|ADE30202.1| 50S ribosomal protein L3 [Rickettsia prowazekii Rp22] Length = 216 Score = 252 bits (644), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 115/213 (53%), Positives = 165/213 (77%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL K+GY A+ +G + K+ Sbjct: 1 MRTGIIAQKVGMTSVFNDKGERISLTLVKVDDCQVVGHKTLAKHGYNALVIGVKDQKISK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+ F++ ++PK KL EFR+ +D+ + + S+ +F VGQ VD+T TIGKGF Sbjct: 61 VTKPMKQVFANAKIAPKTKLKEFRIS-EDNFIDIASILEVDHFRVGQFVDITATTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNKVTIQNLKIF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +VD R LI+++G +PG KNS++LV+D+ K A Sbjct: 180 AVDTNRKLIMIQGSIPG-HKNSYLLVKDAIKKA 211 >gi|92117098|ref|YP_576827.1| 50S ribosomal protein L3 [Nitrobacter hamburgensis X14] gi|123083705|sp|Q1QN30|RL3_NITHX RecName: Full=50S ribosomal protein L3 gi|91799992|gb|ABE62367.1| LSU ribosomal protein L3P [Nitrobacter hamburgensis X14] Length = 241 Score = 252 bits (644), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 128/211 (60%), Positives = 156/211 (73%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G IPVTVL L NCQV+ HRT +KNGY+A+Q+G+G K Sbjct: 1 MRSGVIAQKVGMTRVFTDAGEHIPVTVLRLSNCQVLGHRTSEKNGYVALQLGSGARKTVY 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + K RG F+ V PK+K+ EFRV +D L+PVG+ +F VGQ VDVTG ++GKGF Sbjct: 61 LPKAERGQFAVAKVEPKRKVAEFRVS-EDSLIPVGAEIQADHFVVGQFVDVTGTSVGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +RVT NL VV Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRVTTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGLILV+G VPG+ K WI VRD+ K Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWIAVRDAVK 209 >gi|85715131|ref|ZP_01046115.1| 50S ribosomal protein L3 [Nitrobacter sp. Nb-311A] gi|85698046|gb|EAQ35919.1| 50S ribosomal protein L3 [Nitrobacter sp. Nb-311A] Length = 247 Score = 252 bits (643), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 127/211 (60%), Positives = 156/211 (73%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G IPVTVL L NCQV+ HRT +KNGY+A+Q+G+G K Sbjct: 1 MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLSNCQVLGHRTSEKNGYVALQLGSGARKTVY 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + K RG F+ V PK+K+ EFRV +D L+PVG+ +F VGQ VDVTG ++GKG+ Sbjct: 61 MPKAERGQFAVAKVEPKRKVAEFRVSQDS-LIPVGAEIQADHFVVGQFVDVTGTSVGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G MG +R+T NL VV Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGLILV+G VPG+ K WI VRD+ K Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWIAVRDAVK 209 >gi|300022541|ref|YP_003755152.1| 50S ribosomal protein L3 [Hyphomicrobium denitrificans ATCC 51888] gi|299524362|gb|ADJ22831.1| 50S ribosomal protein L3 [Hyphomicrobium denitrificans ATCC 51888] Length = 233 Score = 251 bits (641), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 121/216 (56%), Positives = 157/216 (72%), Gaps = 2/216 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT ++ G +PVTVL L+N QV+ HRT++KNGY A+QVG G K Sbjct: 1 MRSGVIAQKVGMTRIFTDAGEHVPVTVLRLENLQVLSHRTVEKNGYTAIQVGGGTRKPSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++K RG F+ V PK+K+ EFRV ++ L+ VG+ + +F GQ VDVTG T GKGF Sbjct: 61 LTKADRGTFAKAEVEPKRKIAEFRVSPEN-LIDVGAEITADHFVPGQFVDVTGTTQGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GAMKR NFGGLRATHGVS++HR+HGSTG RQDPG+VFK KKMAG +G RVT +NL V Sbjct: 120 QGAMKRWNFGGLRATHGVSVTHRAHGSTGQRQDPGKVFKGKKMAGHLGDERVTTQNLVVA 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 +D RGL++V+G VPG+ K W++VRD+ K A Sbjct: 180 KIDKARGLVMVRGAVPGS-KGGWVIVRDAVKKAAPA 214 >gi|148554274|ref|YP_001261856.1| 50S ribosomal protein L3 [Sphingomonas wittichii RW1] gi|148499464|gb|ABQ67718.1| LSU ribosomal protein L3P [Sphingomonas wittichii RW1] Length = 317 Score = 251 bits (640), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 125/214 (58%), Positives = 156/214 (72%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR +PVTVL L+N QVV R D++GY+AVQ+GAG AK KN Sbjct: 67 MRTGVIAKKMGMTRLFQEDGRHVPVTVLALENVQVVARREQDRDGYVAVQLGAGSAKPKN 126 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP RG F V PK + EFRV +D LL VG+ S ++ GQ VD+ G T GKGF Sbjct: 127 LTKPERGHFGKAEVEPKAFVAEFRVS-EDGLLDVGAEISADHYVAGQFVDIQGSTQGKGF 185 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR FGGLRATHGVS+SHRS GSTG RQDPG+VFKNKKMAG MG T +NLE+V Sbjct: 186 AGGMKRWGFGGLRATHGVSVSHRSLGSTGQRQDPGKVFKNKKMAGHMGDKNRTQQNLEIV 245 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D +RGL+ VKG VPG+ K W+LV+DS K A Sbjct: 246 QTDAERGLLFVKGSVPGS-KGGWLLVKDSVKIAA 278 >gi|299135257|ref|ZP_07028448.1| 50S ribosomal protein L3 [Afipia sp. 1NLS2] gi|298590234|gb|EFI50438.1| 50S ribosomal protein L3 [Afipia sp. 1NLS2] Length = 243 Score = 251 bits (640), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 127/211 (60%), Positives = 155/211 (73%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G IPVTVL L NCQVV HRT DKNGY A+Q+G+G K Sbjct: 1 MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLGNCQVVGHRTKDKNGYTALQLGSGARKSVY 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + K RG F+ V PK+K+ EFRV DD ++PVG+ + +F GQ VDVTG ++GKGF Sbjct: 61 MPKAERGQFAVAKVEPKRKVVEFRVS-DDAVIPVGAEITADHFVAGQFVDVTGTSVGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T NL VV Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGL+LV+G VPG+ K WI VRD+ K Sbjct: 180 QTDVERGLLLVEGAVPGS-KGGWITVRDAVK 209 >gi|315497973|ref|YP_004086777.1| 50S ribosomal protein l3 [Asticcacaulis excentricus CB 48] gi|315415985|gb|ADU12626.1| 50S ribosomal protein L3 [Asticcacaulis excentricus CB 48] Length = 243 Score = 250 bits (639), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 124/214 (57%), Positives = 157/214 (73%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+KLGMT ++ +G+ +PVTVL L+ CQVV RT DK+GY A+Q+GAG K KN Sbjct: 1 MRTGLLAKKLGMTRYFDAQGQHVPVTVLSLEGCQVVAQRTKDKDGYTALQLGAGTRKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKP R F+ V PK L EFRV +D L+ VG+ FS +F GQ VD+ G TIGKGF Sbjct: 61 VSKPERERFAKAQVEPKAILSEFRVS-EDALVEVGAEFSADHFVEGQRVDIQGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGG+RATHGVS+SHR+HGSTG RQDPGR F KKMAG G VT NLEVV Sbjct: 120 AGAMKRWNFGGMRATHGVSVSHRAHGSTGNRQDPGRTFPGKKMAGHYGVETVTTLNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 +D +RGLI ++G VPGA + S++ +RD+ K + Sbjct: 180 RIDAERGLIFIRGAVPGA-EGSFVKIRDAVKKSA 212 >gi|296533987|ref|ZP_06896503.1| 50S ribosomal protein L3 [Roseomonas cervicalis ATCC 49957] gi|296265653|gb|EFH11762.1| 50S ribosomal protein L3 [Roseomonas cervicalis ATCC 49957] Length = 228 Score = 250 bits (639), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 128/212 (60%), Positives = 159/212 (75%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A+KLGMT ++N +G +PVTVLHLD +VV RT +K+GY AVQ+G G AK KNV Sbjct: 7 RTGLIAKKLGMTRLFNDDGSTVPVTVLHLDQVRVVAARTEEKDGYNAVQLGFGLAKPKNV 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SKP +G F+ V KK+ EFRV D L P G+ S ++F GQ+VDVTG + GKGF+ Sbjct: 67 SKPNKGHFAKAGVEAPKKVVEFRVAADAMLEP-GAKLSANHFVKGQIVDVTGTSKGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 GAMKR NF GL ATHGVSISHRSHGSTG RQDPG+ FKNKKMAG +G RVT +NLEV Sbjct: 126 GAMKRWNFSGLEATHGVSISHRSHGSTGNRQDPGKTFKNKKMAGHLGVERVTTQNLEVAG 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+LVKG VPGA K ++LVRD+ K+A Sbjct: 186 FDLEKGLLLVKGAVPGA-KGGYVLVRDAVKTA 216 >gi|118591184|ref|ZP_01548583.1| 50S ribosomal protein L3 [Stappia aggregata IAM 12614] gi|118436260|gb|EAV42902.1| 50S ribosomal protein L3 [Stappia aggregata IAM 12614] Length = 225 Score = 250 bits (638), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 124/203 (61%), Positives = 152/203 (74%), Gaps = 2/203 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT +YN G +PVTVL L+NCQVV HRT +KNGY A+Q+GAG KVKN K +RG F+ Sbjct: 1 MTRIYNDAGEHVPVTVLRLENCQVVAHRTDEKNGYTALQLGAGTRKVKNTPKALRGHFAV 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 V PK+ + EFRV ++ L+ VG+ + ++ GQ VDVTG +IGKGF+GAMKRHNFGG Sbjct: 61 AKVEPKRTVAEFRVSAEN-LIDVGAELTADHYVEGQFVDVTGTSIGKGFAGAMKRHNFGG 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 RA+HG S+SHRSHGSTG QDPGRVFK KKMAG MG RVT +NL+VV D +RGLI+V Sbjct: 120 GRASHGNSVSHRSHGSTGQCQDPGRVFKGKKMAGHMGDARVTTQNLKVVRTDVERGLIMV 179 Query: 192 KGCVPGAKKNSWILVRDSFKSAV 214 +G VPGA K WILVRD+ K A+ Sbjct: 180 EGSVPGA-KGGWILVRDAIKKAL 201 >gi|67458670|ref|YP_246294.1| 50S ribosomal protein L3 [Rickettsia felis URRWXCal2] gi|75536865|sp|Q4UMS9|RL3_RICFE RecName: Full=50S ribosomal protein L3 gi|67004203|gb|AAY61129.1| 50S ribosomal protein L3 [Rickettsia felis URRWXCal2] Length = 215 Score = 250 bits (638), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 113/211 (53%), Positives = 164/211 (77%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G + K+ Sbjct: 1 MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGIKDKKISR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+ F++ +SPK KL EFR+ +++ + + + YFT GQ VD+T TIGKGF Sbjct: 61 VTKPMKQVFANAKISPKTKLKEFRIS-EENFIDIAASLEVDYFTAGQFVDITATTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +VD +R LI+++G +PG KNS++ V+D+ K Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIK 209 >gi|239948319|ref|ZP_04700072.1| 50S ribosomal protein L3 [Rickettsia endosymbiont of Ixodes scapularis] gi|239922595|gb|EER22619.1| 50S ribosomal protein L3 [Rickettsia endosymbiont of Ixodes scapularis] Length = 215 Score = 249 bits (637), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 113/211 (53%), Positives = 165/211 (78%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G + K+ Sbjct: 1 MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V KPM+ F++ +SPK KL EFR+ +++ + + + +FT GQ VD+T +TIGKGF Sbjct: 61 VIKPMKQVFANAKISPKTKLKEFRIS-EENFIDIAASLEVDHFTAGQFVDITAITIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +VD +R LI+++G +PG KNS++LV+D+ K Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLLVKDAIK 209 >gi|329114217|ref|ZP_08242979.1| 50S ribosomal protein L3 [Acetobacter pomorum DM001] gi|326696293|gb|EGE47972.1| 50S ribosomal protein L3 [Acetobacter pomorum DM001] Length = 238 Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 128/213 (60%), Positives = 164/213 (76%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+KLGM+ ++ +G +PVTVLH+D+ QVV R +++GY+AVQ+G G+AKVKN Sbjct: 12 MRTGLIAKKLGMSRLFKEDGTHVPVTVLHVDDVQVVDVRNQERDGYVAVQLGMGKAKVKN 71 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP RG F+ V PK+ L EFRV DD L VG+ S S+F VGQ VDVTG++ GKGF Sbjct: 72 VTKPNRGHFARTKVEPKQALREFRVA-DDAALEVGATLSASHFVVGQKVDVTGVSKGKGF 130 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NF GL ATHGVSISHRSHGSTG RQDPG+ FKNKKMAG +G RVT NLE+ Sbjct: 131 AGAMKRWNFAGLEATHGVSISHRSHGSTGNRQDPGKTFKNKKMAGHLGDERVTTLNLEIA 190 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +VD ++ LI+V+G VPGA KN +L+RD+ K A Sbjct: 191 AVDPEKNLIMVRGSVPGA-KNGVVLIRDAIKKA 222 >gi|229587009|ref|YP_002845510.1| 50S ribosomal protein L3 [Rickettsia africae ESF-5] gi|259709733|sp|C3PPA7|RL3_RICAE RecName: Full=50S ribosomal protein L3 gi|228022059|gb|ACP53767.1| 50S ribosomal protein L3 [Rickettsia africae ESF-5] Length = 215 Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 114/211 (54%), Positives = 164/211 (77%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ VG + K+ Sbjct: 1 MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVVGVKDKKISR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPMR F++ +SPK KL EFR+ +++ + + + +FT GQ VD+T TIGKGF Sbjct: 61 VTKPMRQVFANAKISPKTKLKEFRIS-EENFIDIAASLEVDHFTAGQFVDITATTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +VD +R LI+++G +PG KNS++ V+D+ K Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIK 209 >gi|90424937|ref|YP_533307.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris BisB18] gi|109893548|sp|Q211E8|RL3_RHOPB RecName: Full=50S ribosomal protein L3 gi|90106951|gb|ABD88988.1| LSU ribosomal protein L3P [Rhodopseudomonas palustris BisB18] Length = 243 Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 126/211 (59%), Positives = 155/211 (73%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G IPVTVL L NCQV+ HRT +KNGY+A+Q+G+G K Sbjct: 1 MRSGVIAQKVGMTRVFTETGEHIPVTVLKLGNCQVLGHRTTEKNGYVAMQLGSGTRKTVY 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + K RG F+ V PK+K+ EFRV +D L+PVG+ +F VGQ VDVTG ++GKGF Sbjct: 61 LPKAERGQFAVAKVEPKRKVAEFRVS-EDALIPVGAEIQADHFVVGQFVDVTGTSVGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T NL VV Sbjct: 120 AGGIKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RGLILV+G VPG+ K WI VRD+ K Sbjct: 180 QTDVARGLILVEGAVPGS-KGGWIAVRDAVK 209 >gi|15892929|ref|NP_360643.1| 50S ribosomal protein L3 [Rickettsia conorii str. Malish 7] gi|42559674|sp|Q92GW6|RL3_RICCN RecName: Full=50S ribosomal protein L3 gi|15620121|gb|AAL03544.1| 50S ribosomal protein L3 [Rickettsia conorii str. Malish 7] Length = 215 Score = 249 bits (636), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 113/211 (53%), Positives = 164/211 (77%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G + K+ Sbjct: 1 MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPMR F++ +SPK KL EFR+ +++ + + + +FT GQ VD+T TIGKGF Sbjct: 61 VTKPMRQVFANAKISPKTKLKEFRIS-EENFIDIAASLEVDHFTAGQFVDITATTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNKVTIQNLKIF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +VD +R LI+++G +PG KNS++ V+D+ K Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIK 209 >gi|254418121|ref|ZP_05031845.1| ribosomal protein L3 [Brevundimonas sp. BAL3] gi|196184298|gb|EDX79274.1| ribosomal protein L3 [Brevundimonas sp. BAL3] Length = 249 Score = 249 bits (636), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 126/213 (59%), Positives = 153/213 (71%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+KLGMT V+ +G +PVTVL LD CQVV RT +++GY+A+Q+GAG K KN Sbjct: 1 MRTGVIAKKLGMTRVFADDGAHVPVTVLQLDGCQVVGQRTQERDGYVALQLGAGTKKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +K R F+ V PK + EFRV + LL VG+ S +F VGQ VD+ G TIGKGF Sbjct: 61 TNKAQRETFAKAEVEPKAYVTEFRVDAEG-LLDVGAELSAEHFVVGQKVDIQGETIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F KKMAG G VT +NL VV Sbjct: 120 AGAMKRWNFGGLRATHGVSLSHRSHGSTGNRQDPGRTFPGKKMAGHYGAETVTTQNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD +RGLIL+KG VPG S++ VRD+ K A Sbjct: 180 RVDAERGLILIKGAVPG-HDGSYVKVRDAIKKA 211 >gi|197104696|ref|YP_002130073.1| 50S ribosomal protein L3 [Phenylobacterium zucineum HLK1] gi|226730544|sp|B4R8L7|RL3_PHEZH RecName: Full=50S ribosomal protein L3 gi|196478116|gb|ACG77644.1| 50S ribosomal protein L3 [Phenylobacterium zucineum HLK1] Length = 261 Score = 249 bits (636), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 125/216 (57%), Positives = 158/216 (73%), Gaps = 2/216 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+KLGM ++ G +PVTVL L+ CQVV HRT DK+GY+A+Q+GAG K KN Sbjct: 1 MRTGVIAKKLGMARFFDEAGVHVPVTVLSLEGCQVVAHRTKDKDGYVALQLGAGSKKPKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK +RG F+ V PK KL EF+V +D+L+ VG+ + +F GQ VD+TG T+GKGF Sbjct: 61 TSKGLRGHFAKGQVEPKAKLVEFKVS-EDNLIDVGAELTADHFVPGQKVDITGTTVGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F KKMAG G VT NL V Sbjct: 120 AGAMKRWNFGGLRATHGVSVSHRSHGSTGQRQDPGRTFPGKKMAGHYGQETVTTLNLTVW 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 VD +RGLILVKG VPG + +++ +RD+ K+A+ Sbjct: 180 RVDAERGLILVKGAVPGT-EGTFVKIRDAVKAALPA 214 >gi|157828860|ref|YP_001495102.1| 50S ribosomal protein L3 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933587|ref|YP_001650376.1| 50S ribosomal protein L3 [Rickettsia rickettsii str. Iowa] gi|238650972|ref|YP_002916828.1| 50S ribosomal protein L3 [Rickettsia peacockii str. Rustic] gi|166234587|sp|A8GT69|RL3_RICRS RecName: Full=50S ribosomal protein L3 gi|189029476|sp|B0BUR0|RL3_RICRO RecName: Full=50S ribosomal protein L3 gi|259709734|sp|C4K2H9|RL3_RICPU RecName: Full=50S ribosomal protein L3 gi|157801341|gb|ABV76594.1| 50S ribosomal protein L3 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908674|gb|ABY72970.1| LSU ribosomal protein L3P [Rickettsia rickettsii str. Iowa] gi|238625070|gb|ACR47776.1| 50S ribosomal protein L3 [Rickettsia peacockii str. Rustic] Length = 215 Score = 249 bits (636), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 113/211 (53%), Positives = 164/211 (77%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G + K+ Sbjct: 1 MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPMR F++ +SPK KL EFR+ +++ + + + +FT GQ VD+T TIGKGF Sbjct: 61 VTKPMRQVFANAKISPKTKLKEFRIS-EENFIDIAASLEVDHFTAGQFVDITATTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +VD +R LI+++G +PG KNS++ V+D+ K Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIK 209 >gi|209884813|ref|YP_002288670.1| ribosomal protein L3 [Oligotropha carboxidovorans OM5] gi|226730542|sp|B6JET3|RL3_OLICO RecName: Full=50S ribosomal protein L3 gi|209873009|gb|ACI92805.1| ribosomal protein L3 [Oligotropha carboxidovorans OM5] Length = 243 Score = 249 bits (635), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 127/211 (60%), Positives = 154/211 (72%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GM V+ G IPVTVL L NCQVV HRT DKNGY A+Q+GAG K Sbjct: 1 MRSGVIAQKVGMMRVFTEAGEHIPVTVLKLGNCQVVGHRTKDKNGYTALQLGAGARKSVY 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + K RG F+ V PK+K+ EFRV +D ++PVG+ +F VGQ VDVTG +IGKG+ Sbjct: 61 MPKAERGQFAVAKVEPKRKVAEFRVS-EDAIIPVGAEIQADHFVVGQFVDVTGTSIGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T NL VV Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGL+LV+G VPG+ K WI VRD+ K Sbjct: 180 QTDVERGLLLVEGAVPGS-KGGWITVRDAVK 209 >gi|258542027|ref|YP_003187460.1| 50S ribosomal protein L3 [Acetobacter pasteurianus IFO 3283-01] gi|256633105|dbj|BAH99080.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-01] gi|256636162|dbj|BAI02131.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-03] gi|256639217|dbj|BAI05179.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-07] gi|256642271|dbj|BAI08226.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-22] gi|256645326|dbj|BAI11274.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-26] gi|256648381|dbj|BAI14322.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-32] gi|256651434|dbj|BAI17368.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654425|dbj|BAI20352.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-12] Length = 227 Score = 249 bits (635), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 128/213 (60%), Positives = 164/213 (76%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+KLGM+ ++ +G +PVTVLH+D+ QVV R +++GY+AVQ+G G+AKVKN Sbjct: 1 MRTGLIAKKLGMSRLFKEDGTHVPVTVLHVDDVQVVDVRNQERDGYVAVQLGMGKAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP RG F+ V PK+ L EFRV DD L VG+ S S+F VGQ VDVTG++ GKGF Sbjct: 61 VTKPNRGHFARTKVEPKQALREFRVA-DDAALEVGATLSASHFVVGQKVDVTGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NF GL ATHGVSISHRSHGSTG RQDPG+ FKNKKMAG +G RVT NLE+ Sbjct: 120 AGAMKRWNFAGLEATHGVSISHRSHGSTGNRQDPGKTFKNKKMAGHLGDERVTTLNLEIA 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +VD ++ LI+V+G VPGA KN +L+RD+ K A Sbjct: 180 AVDPEKNLIMVRGSVPGA-KNGVVLIRDAIKKA 211 >gi|34581369|ref|ZP_00142849.1| 50S ribosomal protein L3 [Rickettsia sibirica 246] gi|28262754|gb|EAA26258.1| 50S ribosomal protein L3 [Rickettsia sibirica 246] Length = 215 Score = 248 bits (632), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 113/211 (53%), Positives = 163/211 (77%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G + K+ Sbjct: 1 MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPMR F++ +SPK KL EFR+ ++ + + + +FT GQ VD+T TIGKGF Sbjct: 61 VTKPMRQVFANAKISPKTKLKEFRISAEN-FIDIAASLEVDHFTAGQFVDITATTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +VD +R LI+++G +PG KNS++ V+D+ K Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIK 209 >gi|27380511|ref|NP_772040.1| 50S ribosomal protein L3 [Bradyrhizobium japonicum USDA 110] gi|42559627|sp|Q89J84|RL3_BRAJA RecName: Full=50S ribosomal protein L3 gi|27353675|dbj|BAC50665.1| 50S ribosomal protein L3 [Bradyrhizobium japonicum USDA 110] Length = 238 Score = 247 bits (630), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 126/214 (58%), Positives = 157/214 (73%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G IPVTVL L NCQVV HRT +KNGY+A+Q+G+G K Sbjct: 1 MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLGNCQVVGHRTEEKNGYVALQLGSGSRKTVY 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + K RG F+ V PK+++ EFRV D ++PVG+ +F VGQ VDVTG ++GKGF Sbjct: 61 MPKAERGQFAVAKVEPKRRVEEFRVTADA-MIPVGAEIQADHFVVGQFVDVTGTSVGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ +KNKKM G MG +R+T NL VV Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTWKNKKMPGHMGVDRITTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 +D +RGLILV+G VPG+ K WI VRD+ K + Sbjct: 180 QLDVERGLILVEGAVPGS-KGGWIRVRDAVKKPL 212 >gi|329889129|ref|ZP_08267472.1| 50S ribosomal protein L3 [Brevundimonas diminuta ATCC 11568] gi|328844430|gb|EGF93994.1| 50S ribosomal protein L3 [Brevundimonas diminuta ATCC 11568] Length = 247 Score = 247 bits (630), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 124/213 (58%), Positives = 155/213 (72%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+KLGMT V+ +G +PVTVL LD CQVV RT +++GY+A+Q+GAG K KN Sbjct: 1 MRTGVIAKKLGMTRVFADDGAHVPVTVLQLDGCQVVGQRTKERDGYVALQLGAGVKKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +K R F+ V PK + EFRV +D LL VG+ S +F GQ VD+ G TIGKGF Sbjct: 61 TAKAQREVFAKAEVEPKAYVTEFRV-GEDALLDVGAELSADHFLAGQKVDIQGHTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRA+HGVSISHRSHGSTG RQDPG+VFK KKMAG +G VT +NL VV Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHLGQEVVTTQNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD +RGLIL+KG VPG +++ + D+ K A Sbjct: 180 RVDAERGLILIKGAVPG-HDGAYVKISDAIKKA 211 >gi|157804035|ref|YP_001492584.1| 50S ribosomal protein L3 [Rickettsia canadensis str. McKiel] gi|166234586|sp|A8EZL6|RL3_RICCK RecName: Full=50S ribosomal protein L3 gi|157785298|gb|ABV73799.1| 50S ribosomal protein L3 [Rickettsia canadensis str. McKiel] Length = 215 Score = 245 bits (626), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 111/211 (52%), Positives = 163/211 (77%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G + K+ Sbjct: 1 MRTGIIAQKIGMTSVFNDKGERIALTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+ F++ +SPK KL EFR+ +++ + V + +F GQ VD+T +TIGKGF Sbjct: 61 VTKPMKQVFANAKISPKTKLKEFRIS-EENFIDVAASLEVDHFMAGQFVDITAITIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +VD R LI+++G +PG KNS++ ++D+ K Sbjct: 180 AVDKDRKLIMIQGSIPG-HKNSYLSIKDAIK 209 >gi|157964806|ref|YP_001499630.1| 50S ribosomal protein L3 [Rickettsia massiliae MTU5] gi|166990939|sp|A8F2E7|RL3_RICM5 RecName: Full=50S ribosomal protein L3 gi|157844582|gb|ABV85083.1| 50S ribosomal protein L3 [Rickettsia massiliae MTU5] Length = 215 Score = 245 bits (626), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 111/211 (52%), Positives = 163/211 (77%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G + K+ Sbjct: 1 MRTGIIAQKVGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+ F++ +SPK KL EFR+ ++ + + + +FT GQ VD+T TIGKGF Sbjct: 61 VTKPMKQVFANAKISPKTKLKEFRIS-EEHFIDIATSLEVDHFTAGQFVDITATTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VF+ KKMAG MG N+VT++NL++ Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFRGKKMAGHMGCNQVTIQNLKIF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +VD +R LI+++G +PG KNS++ V+D+ K Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIK 209 >gi|157826063|ref|YP_001493783.1| 50S ribosomal protein L3 [Rickettsia akari str. Hartford] gi|166234584|sp|A8GPF0|RL3_RICAH RecName: Full=50S ribosomal protein L3 gi|157800021|gb|ABV75275.1| 50S ribosomal protein L3 [Rickettsia akari str. Hartford] Length = 215 Score = 244 bits (623), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 111/211 (52%), Positives = 163/211 (77%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+K+GMT V+N +G RIP+T++ +D+CQVV H+TL+K+GY A+ +G + K+ Sbjct: 1 MRTGIIAQKIGMTSVFNDKGERIPLTLVKVDDCQVVGHKTLEKHGYNALVIGIKDKKISR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+ F++ +SPK KL EFR+ + + + + + +F GQ VD+T TIGKGF Sbjct: 61 VTKPMKQVFANAKISPKTKLKEFRIS-EGNFIDIAANLEVDHFMAGQFVDITATTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +VD +R LI+++G +PG KNS++ ++D+ K Sbjct: 180 AVDRERKLIMIRGSIPG-HKNSYLSIKDAVK 209 >gi|329850207|ref|ZP_08265052.1| 50S ribosomal protein L3 [Asticcacaulis biprosthecum C19] gi|328840522|gb|EGF90093.1| 50S ribosomal protein L3 [Asticcacaulis biprosthecum C19] Length = 242 Score = 244 bits (622), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 121/214 (56%), Positives = 154/214 (71%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+KLGMT ++ EG +PVTVL LD CQVV RT K+GY+A+Q+GAG K KN Sbjct: 1 MRTGLIAKKLGMTRFFDSEGLHVPVTVLALDGCQVVAQRTQGKDGYVALQLGAGTKKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S P R F+ V PK L EFRV +++L+ VG+ F+ +F GQ VD+ G+TIGKGF Sbjct: 61 TSNPERVRFAKAQVEPKAILTEFRVS-EENLIDVGAEFTADHFVEGQRVDIQGVTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F KKMAG G VT NL V Sbjct: 120 AGAMKRWNFGGLRATHGVSVSHRSHGSTGQRQDPGRTFPGKKMAGHYGVETVTTLNLTVA 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 +D +RGL+ ++G VPGA + S++ +RD+ K A Sbjct: 180 RIDAERGLVFIRGAVPGA-EGSYVKIRDAVKKAA 212 >gi|91205877|ref|YP_538232.1| 50S ribosomal protein L3 [Rickettsia bellii RML369-C] gi|157826764|ref|YP_001495828.1| 50S ribosomal protein L3 [Rickettsia bellii OSU 85-389] gi|109893551|sp|Q1RHM1|RL3_RICBR RecName: Full=50S ribosomal protein L3 gi|166234585|sp|A8GVB4|RL3_RICB8 RecName: Full=50S ribosomal protein L3 gi|91069421|gb|ABE05143.1| 50S ribosomal protein L3 [Rickettsia bellii RML369-C] gi|157802068|gb|ABV78791.1| 50S ribosomal protein L3 [Rickettsia bellii OSU 85-389] Length = 215 Score = 243 bits (621), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 109/211 (51%), Positives = 163/211 (77%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+K+GMT V+N G+R+P+T++ +D+CQVV H+ +K+GY A+ +G + K+ Sbjct: 1 MRTGIIAQKVGMTSVFNNNGKRVPLTLVKVDDCQVVGHKIAEKHGYNALVIGIKDKKISR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+ F++ VSPK KL EFR+ +D+ + + + +FT GQ +DVT TIGKGF Sbjct: 61 VTKPMKQVFANAKVSPKTKLKEFRIS-EDNFIDIAASLEVDHFTAGQFIDVTATTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG ++VT++NL++ Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCSQVTIQNLKIF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 ++D ++GLI+++G +PG K S+I ++D+ K Sbjct: 180 AIDKEQGLIMIQGSIPG-HKGSYISIKDAIK 209 >gi|83949796|ref|ZP_00958529.1| Ribosomal protein L3 [Roseovarius nubinhibens ISM] gi|83837695|gb|EAP76991.1| Ribosomal protein L3 [Roseovarius nubinhibens ISM] Length = 268 Score = 242 bits (618), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 122/200 (61%), Positives = 148/200 (74%), Gaps = 2/200 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++ +G++IPVTVL LD QVV RT + +GY AVQ+GAG K K VSK MRG FS Sbjct: 1 MTRLFMEDGKQIPVTVLQLDKLQVVAQRTPEAHGYSAVQLGAGSIKAKRVSKAMRGHFSI 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 V PK+K+ EFRV ++L+ VG + ++ GQ VDV+G +IGKGF+GAMKRHNFGG Sbjct: 61 AKVEPKRKIAEFRV-APENLINVGEEITADHYFEGQFVDVSGTSIGKGFAGAMKRHNFGG 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 LRATHGVSISHRSHGSTG QDPGRVFK KKMAG MG RVT +NL+VV D RGLI+V Sbjct: 120 LRATHGVSISHRSHGSTGQCQDPGRVFKGKKMAGHMGAARVTTQNLQVVKTDADRGLIMV 179 Query: 192 KGCVPGAKKNSWILVRDSFK 211 KG VPG+ K W+ V+D+ K Sbjct: 180 KGAVPGS-KGGWVTVKDAVK 198 >gi|167645578|ref|YP_001683241.1| 50S ribosomal protein L3 [Caulobacter sp. K31] gi|189042835|sp|B0T2C2|RL3_CAUSK RecName: Full=50S ribosomal protein L3 gi|167348008|gb|ABZ70743.1| ribosomal protein L3 [Caulobacter sp. K31] Length = 256 Score = 241 bits (616), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 120/213 (56%), Positives = 155/213 (72%), Gaps = 2/213 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GV+A+KLGMT ++ G+ +PVTVL LD CQV RT++K+GY A+Q+GAG K KN Sbjct: 7 RTGVIAKKLGMTRFFDETGQHVPVTVLSLDGCQVTAQRTVEKDGYTALQLGAGAKKPKNT 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 MRG F+ +V PK+ + EFRV + L+ VG+ F+ ++ GQ VD+ G+T+GKGF+ Sbjct: 67 PNAMRGHFAKNSVEPKRIVAEFRVD-EAALIEVGAEFTADHYVAGQKVDIQGITVGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 GAMKR NF GLRATHGVS+SHRSHGSTG RQDPGR FK KKMAG +G VT N+ V Sbjct: 126 GAMKRWNFSGLRATHGVSVSHRSHGSTGQRQDPGRTFKGKKMAGHLGQETVTTLNVTVWK 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 VD +RGLILVKG VPG+ + S++ VRD+ K A Sbjct: 186 VDVERGLILVKGAVPGS-EGSYVKVRDAIKKAA 217 >gi|295688906|ref|YP_003592599.1| 50S ribosomal protein L3 [Caulobacter segnis ATCC 21756] gi|295430809|gb|ADG09981.1| 50S ribosomal protein L3 [Caulobacter segnis ATCC 21756] Length = 254 Score = 241 bits (616), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 121/214 (56%), Positives = 157/214 (73%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R+GV+A+KLGMT ++ G+ +PVTVL LD CQV RT++K+GY A+Q+GAG K KN Sbjct: 6 QRTGVLAKKLGMTRFFDEAGQHVPVTVLSLDGCQVTGVRTVEKDGYTALQLGAGAKKAKN 65 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK +RG F+ V PK+ + EFRV+ ++ L+ VG+ + +F GQ VD+ G+T+GKGF Sbjct: 66 TSKALRGHFAKAAVEPKRVVAEFRVE-ENALIEVGAELTADHFVAGQKVDIQGVTVGKGF 124 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F KKMAG +G VT N+ V Sbjct: 125 AGAMKRWNFGGLRATHGVSVSHRSHGSTGNRQDPGRTFPGKKMAGHLGQETVTTLNVTVW 184 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 VD +RGLILVKG VPG + S++ VRD+ K A+ Sbjct: 185 KVDVERGLILVKGAVPG-HEGSYVKVRDAVKKAL 217 >gi|161485649|ref|NP_420061.2| 50S ribosomal protein L3 [Caulobacter crescentus CB15] gi|42559686|sp|Q9A8V3|RL3_CAUCR RecName: Full=50S ribosomal protein L3 Length = 255 Score = 241 bits (615), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 121/214 (56%), Positives = 156/214 (72%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R+GV+A+KLGMT ++ G+ +PVTVL LD CQV RT++K+GY A+Q+GAG K KN Sbjct: 6 QRTGVIAKKLGMTRFFDEAGQHVPVTVLSLDGCQVTGVRTVEKDGYTALQLGAGAKKAKN 65 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S MRG F+ V PK+ + EFRV+ ++ L+ VG+ + +F GQ VD+ G+T+GKGF Sbjct: 66 TSNAMRGHFAKAAVEPKRVVAEFRVE-ENALIEVGAELTADHFVAGQKVDIQGVTVGKGF 124 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F KKMAG +G VT N+ V Sbjct: 125 AGAMKRWNFGGLRATHGVSVSHRSHGSTGNRQDPGRTFPGKKMAGHLGQETVTTLNVTVW 184 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 VD +RGLILVKG VPG + S++ VRD+ K A+ Sbjct: 185 KVDVERGLILVKGAVPG-HEGSYVKVRDAVKKAL 217 >gi|221234243|ref|YP_002516679.1| 50S ribosomal protein L3 [Caulobacter crescentus NA1000] gi|13422579|gb|AAK23229.1| ribosomal protein L3 [Caulobacter crescentus CB15] gi|220963415|gb|ACL94771.1| LSU ribosomal protein L3P [Caulobacter crescentus NA1000] Length = 267 Score = 241 bits (614), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 121/214 (56%), Positives = 156/214 (72%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R+GV+A+KLGMT ++ G+ +PVTVL LD CQV RT++K+GY A+Q+GAG K KN Sbjct: 18 QRTGVIAKKLGMTRFFDEAGQHVPVTVLSLDGCQVTGVRTVEKDGYTALQLGAGAKKAKN 77 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S MRG F+ V PK+ + EFRV+ ++ L+ VG+ + +F GQ VD+ G+T+GKGF Sbjct: 78 TSNAMRGHFAKAAVEPKRVVAEFRVE-ENALIEVGAELTADHFVAGQKVDIQGVTVGKGF 136 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F KKMAG +G VT N+ V Sbjct: 137 AGAMKRWNFGGLRATHGVSVSHRSHGSTGNRQDPGRTFPGKKMAGHLGQETVTTLNVTVW 196 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 VD +RGLILVKG VPG + S++ VRD+ K A+ Sbjct: 197 KVDVERGLILVKGAVPG-HEGSYVKVRDAVKKAL 229 >gi|84515208|ref|ZP_01002571.1| 50S ribosomal protein L3 [Loktanella vestfoldensis SKA53] gi|84511367|gb|EAQ07821.1| 50S ribosomal protein L3 [Loktanella vestfoldensis SKA53] Length = 272 Score = 240 bits (613), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 115/200 (57%), Positives = 154/200 (77%), Gaps = 2/200 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++ +GR++PVTVL L+N QVV RT++K+GY+AVQ+GAG AK K S+ MRG F++ Sbjct: 1 MTRLFMEDGRQVPVTVLALENLQVVAQRTVEKDGYVAVQLGAGAAKAKRTSQAMRGHFAA 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 V PK+K+ EFRV ++ ++ VG + +++ GQ VDV+G +IGKGF+GAMKRHNFGG Sbjct: 61 AKVEPKRKVAEFRVAPEN-MINVGETITANHYFEGQYVDVSGTSIGKGFAGAMKRHNFGG 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 LRA+HGVS+SHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV D RGLI+V Sbjct: 120 LRASHGVSVSHRSHGSTGQCQDPGKVFKGKKMAGHMGSARVTTQNLQVVRTDADRGLIMV 179 Query: 192 KGCVPGAKKNSWILVRDSFK 211 KG VPG+ + W+ ++D+ K Sbjct: 180 KGAVPGS-RGGWVTLKDAVK 198 >gi|297717842|gb|ADI50064.1| LSU ribosomal protein L3p [Candidatus Odyssella thessalonicensis L13] Length = 213 Score = 237 bits (605), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 115/215 (53%), Positives = 155/215 (72%), Gaps = 3/215 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVK 59 MR+G++A K+GMT + +G +PVTVL + +C VV +T D K+GY AVQ+G+ +AK+ Sbjct: 1 MRTGLIAEKVGMTQFFAADGTLVPVTVLQVSDCVVVGKKTADSKDGYNAVQIGSNKAKIN 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV+KPMR FF+ + P+ L EFRV ++ L P G+ +F GQ VDVTG +IGKG Sbjct: 61 NVTKPMREFFAKKEIEPRAHLKEFRVSSENLLEP-GAELKADHFAAGQFVDVTGTSIGKG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+GAMKRHNFGGLRA+HGVS++HRSHGSTG RQDPG+VFKNKKMAG MG RVT NL + Sbjct: 120 FAGAMKRHNFGGLRASHGVSVTHRSHGSTGNRQDPGKVFKNKKMAGHMGARRVTKMNLTI 179 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 +D ++ LI ++G VPG+ + + VRD+ K + Sbjct: 180 YGIDAEKNLIFIRGSVPGS-QGGIVYVRDAIKKSA 213 >gi|114797091|ref|YP_761529.1| 50S ribosomal protein L3 [Hyphomonas neptunium ATCC 15444] gi|123322946|sp|Q0BYB4|RL3_HYPNA RecName: Full=50S ribosomal protein L3 gi|114737265|gb|ABI75390.1| ribosomal protein L3 [Hyphomonas neptunium ATCC 15444] Length = 252 Score = 236 bits (603), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 126/227 (55%), Positives = 158/227 (69%), Gaps = 17/227 (7%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK--------------NGYM 47 R+GV+ARK+GMT ++ +GR +PVTVL LD CQVV R+ ++ +GY Sbjct: 7 RTGVLARKVGMTRIFAADGRHVPVTVLSLDGCQVVGVRSEEERSVTTKKGGQVTRTDGYK 66 Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107 AV +G+G+ K KN +K +RG F+ V+PK KL EFRV DL VGS +F GQ Sbjct: 67 AVIMGSGDKKAKNTTKALRGQFAKAGVAPKAKLKEFRVS--GDLPEVGSTVQADHFAEGQ 124 Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167 LVDV+ M+IGKGF+GAMKR NF GLRA+HGVSISHR+HGSTG QDPGRVFKNKKMAG + Sbjct: 125 LVDVSAMSIGKGFAGAMKRWNFSGLRASHGVSISHRAHGSTGMNQDPGRVFKNKKMAGHL 184 Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 G RVT +NL VV D +RGLILVKG VPG +++ VRD+ K A+ Sbjct: 185 GDERVTTQNLVVVRTDVERGLILVKGSVPG-HDGTFVEVRDAVKKAL 230 >gi|218463388|ref|ZP_03503479.1| 50S ribosomal protein L3 [Rhizobium etli Kim 5] Length = 159 Score = 228 bits (582), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 109/160 (68%), Positives = 128/160 (80%), Gaps = 1/160 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G +PVTVL +D CQVV RT++KNGY AVQ+GAG+AKVKN Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMDGCQVVATRTVEKNGYTAVQLGAGQAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ NV PK KL EFRV +D+LL +G+ +F GQLVDVTG TIGKGF Sbjct: 61 TSKAMRGNFAVANVEPKAKLAEFRV-SEDNLLEIGTEIKAGHFAAGQLVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VF+ Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFQE 159 >gi|189183951|ref|YP_001937736.1| 50S ribosomal protein L3 [Orientia tsutsugamushi str. Ikeda] gi|189180722|dbj|BAG40502.1| 50S ribosomal protein L3 [Orientia tsutsugamushi str. Ikeda] Length = 227 Score = 215 bits (548), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 109/210 (51%), Positives = 145/210 (69%), Gaps = 2/210 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 RSG++A KLGM+ ++ GR++ +T+L +D CQV+ H+ + K+GY AV +G V Sbjct: 16 RSGLIAEKLGMSSKFDENGRKVAITLLKVDVCQVLWHKLVSKDGYNAVILGYKNISPFKV 75 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KPMR FS + PK + EF+V +D +L + S+ SYF VGQ VDV G+TIGKGF+ Sbjct: 76 KKPMRSIFSRAKIEPKAVIKEFKVA-EDRMLEIASILDASYFRVGQYVDVRGITIGKGFA 134 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 GAMKRH F GL A+HGVSISHRSHGSTG R PGR FKNKKMAG MG T++NL+V S Sbjct: 135 GAMKRHGFRGLEASHGVSISHRSHGSTGNRAYPGRTFKNKKMAGHMGVKFATIQNLKVDS 194 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD ++ L+++KG +PG K S + + DS K Sbjct: 195 VDLEKRLLVIKGSIPG-KSGSIVYITDSIK 223 >gi|91763160|ref|ZP_01265124.1| 50S ribosomal protein L3 [Candidatus Pelagibacter ubique HTCC1002] gi|91717573|gb|EAS84224.1| 50S ribosomal protein L3 [Candidatus Pelagibacter ubique HTCC1002] Length = 236 Score = 213 bits (542), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 108/208 (51%), Positives = 143/208 (68%), Gaps = 2/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 +V +K+GMT + GR +PVTV+ ++ +V+ +K GY AVQ+G G+ K ++K Sbjct: 5 ALVGKKIGMTREFYKTGRLVPVTVIKMEKARVIQVIEEEKRGYKAVQLGFGKIKASKLTK 64 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 M+GF++ N KKKL EFRV KD +L G+ F F + VD T TIGKGF+GA Sbjct: 65 AMKGFYAKKNTEAKKKLKEFRV-KDTELYKEGNEFGLEIFNEVKFVDTTSKTIGKGFAGA 123 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNFGGLRATHGVS+SHRSHGSTG RQDPG+VFK KKMAG MG T++NLE++ D Sbjct: 124 MKRHNFGGLRATHGVSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDRVRTMQNLEIIKTD 183 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 + L+ +KG +PG+ KN+ ILV+ S K Sbjct: 184 IENELLYLKGSIPGS-KNTEILVKKSVK 210 >gi|148284214|ref|YP_001248304.1| 50S ribosomal protein L3 [Orientia tsutsugamushi str. Boryong] gi|146739653|emb|CAM79442.1| 50S ribosomal protein L3 [Orientia tsutsugamushi str. Boryong] Length = 229 Score = 211 bits (537), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 107/210 (50%), Positives = 143/210 (68%), Gaps = 2/210 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 RSG++A KLGM+ ++ GR++ +T+L +D CQV+ H+ + K+GY AV +G V Sbjct: 18 RSGLIAEKLGMSSKFDESGRKVAITLLKVDVCQVLWHKLVSKDGYNAVILGYKNISPFKV 77 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KPM FS + PK + EF+V +D +L + S+ SYF VGQ VDV G+TIGKGF+ Sbjct: 78 KKPMHSIFSRAKIEPKAIIKEFKVA-EDKMLEIASILDASYFRVGQYVDVRGVTIGKGFA 136 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 GAMKRH F GL A+HGVSISHRSHGSTG R PGR FKNKKMAG MG T++NL V S Sbjct: 137 GAMKRHGFRGLEASHGVSISHRSHGSTGNRAYPGRTFKNKKMAGHMGVRFATIQNLRVDS 196 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD ++ L++++G +PG K S + + DS K Sbjct: 197 VDLEKRLLVIQGSIPG-KSGSIVYITDSIK 225 >gi|71083804|ref|YP_266524.1| 50S ribosomal protein L3 [Candidatus Pelagibacter ubique HTCC1062] gi|109893535|sp|Q4FLL8|RL3_PELUB RecName: Full=50S ribosomal protein L3 gi|71062917|gb|AAZ21920.1| 50S ribosomal protein L3 [Candidatus Pelagibacter ubique HTCC1062] Length = 236 Score = 210 bits (535), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 106/208 (50%), Positives = 142/208 (68%), Gaps = 2/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 ++ +K+GMT + GR +PVTV+ ++ +V+ +K GY AVQ+G G+ K ++K Sbjct: 5 ALIGKKIGMTREFYKTGRLVPVTVIKMEKARVIQVIEEEKRGYKAVQLGFGKIKASKLTK 64 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 M+G ++ N KKKL EFRV KD +L G+ F F + VD T TIGKGF+GA Sbjct: 65 AMKGLYAKKNTEAKKKLKEFRV-KDTELYKEGNEFGLEIFNEVKFVDTTSKTIGKGFAGA 123 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNFGGLRATHGVS+SHRSHGSTG RQDPG+VFK KKMAG MG T++NLE++ D Sbjct: 124 MKRHNFGGLRATHGVSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDRVRTMQNLEIIKTD 183 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 + L+ +KG +PG+ KN+ ILV+ S K Sbjct: 184 IENELLYLKGSIPGS-KNTEILVKKSVK 210 >gi|302769378|ref|XP_002968108.1| hypothetical protein SELMODRAFT_145395 [Selaginella moellendorffii] gi|300163752|gb|EFJ30362.1| hypothetical protein SELMODRAFT_145395 [Selaginella moellendorffii] Length = 255 Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 110/209 (52%), Positives = 147/209 (70%), Gaps = 2/209 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K GMT V++ GRRIP+TVL D+ QVV +T+D G+ A+QVG G+ K K + Sbjct: 7 RTGLIAVKCGMTAVWDKWGRRIPITVLWADDNQVVQVKTVDHEGFNALQVGCGQKKPKQL 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 S P G F S V K+KL EF+V +D LLPVG+ + +F GQ +DVTG++IGKGF Sbjct: 67 SIPELGHFRSKGVPIKRKLKEFQVS-EDALLPVGTALTVRHFVPGQFLDVTGVSIGKGFQ 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR F G+ A+HG S+SHRSHG+TG R+ PG+VFKNKKMAG+MG + TV + V Sbjct: 126 GPMKRWGFAGMPASHGASLSHRSHGATGGRKSPGKVFKNKKMAGQMGNRKATVFCVWVYK 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V+ +R LI VKG VPG K N ++ +RDS+ Sbjct: 186 VEPQRDLIWVKGQVPGCKGN-FVYIRDSW 213 >gi|302773854|ref|XP_002970344.1| hypothetical protein SELMODRAFT_267426 [Selaginella moellendorffii] gi|300161860|gb|EFJ28474.1| hypothetical protein SELMODRAFT_267426 [Selaginella moellendorffii] Length = 279 Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 110/209 (52%), Positives = 147/209 (70%), Gaps = 2/209 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K GMT V++ GRRIP+TVL D+ QVV +T+D G+ A+QVG G+ K K + Sbjct: 28 RTGLIAVKCGMTAVWDKWGRRIPITVLWADDNQVVQVKTVDHEGFNALQVGCGQKKPKQL 87 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 S P G F S V K+KL EF+V +D LLPVG+ + +F GQ +DVTG++IGKGF Sbjct: 88 SIPELGHFRSKGVPIKRKLKEFQVS-EDALLPVGTPLTVRHFVPGQFLDVTGVSIGKGFQ 146 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR F G+ A+HG S+SHRSHG+TG R+ PG+VFKNKKMAG+MG + TV + V Sbjct: 147 GPMKRWGFAGMPASHGASLSHRSHGATGGRKSPGKVFKNKKMAGQMGNRKATVFCVWVYK 206 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V+ +R LI VKG VPG K N ++ +RDS+ Sbjct: 207 VEPQRDLIWVKGQVPGCKGN-FVYIRDSW 234 >gi|320582593|gb|EFW96810.1| Mitochondrial ribosomal protein of the large subunit [Pichia angusta DL-1] Length = 272 Score = 209 bits (531), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 108/210 (51%), Positives = 140/210 (66%), Gaps = 2/210 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ K GMT Y+ G R+P TVL +D +VV ++T+DKNGY AVQVG G K+KN Sbjct: 55 RPGLIGVKRGMTQFYSRNGDRVPATVLEIDQVEVVYNKTVDKNGYYAVQVGYGH-KLKNQ 113 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +K M G + + VSPK+ LFEF V+ ++ L+PVGS +F GQ VDV T GKGFS Sbjct: 114 TKAMLGHYRNAKVSPKETLFEFEVKDENGLVPVGSQLKADHFKPGQFVDVISKTKGKGFS 173 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR NF GL ATHG S++HRS GSTG P RV KKMAG +G T+ NLEV+ Sbjct: 174 GVMKRWNFSGLPATHGTSLAHRSAGSTGMNTTPARVLPGKKMAGHLGDEWNTIFNLEVLD 233 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V+ ++G ILVKGCV G+ S++ +RD+ K Sbjct: 234 VNAEKGYILVKGCVSGS-NGSYVQIRDALK 262 >gi|196019520|ref|XP_002118992.1| hypothetical protein TRIADDRAFT_35046 [Trichoplax adhaerens] gi|190577417|gb|EDV18523.1| hypothetical protein TRIADDRAFT_35046 [Trichoplax adhaerens] Length = 217 Score = 207 bits (528), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 104/213 (48%), Positives = 150/213 (70%), Gaps = 2/213 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A+K+GMT ++ G IPVT++ +D V+ +T +KNGY VQ+ A + K + + Sbjct: 5 RTGLIAKKVGMTQIFKENGEVIPVTMILVDENIVLSVKTKEKNGYNGVQLAAFDQKPQRL 64 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SK ++G F +S KKK+ EF V +++LL VG ++F Q VD+TG++IGKG++ Sbjct: 65 SKSVKGSFEKAKISAKKKMKEFIVH-ENNLLKVGDKVDVNHFKKNQYVDITGISIGKGYA 123 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF GL ATHGVSISHRS GSTG QDPGRVFK KKMAG+MG +VT +N++V+ Sbjct: 124 GTMKRHNFKGLEATHGVSISHRSAGSTGQCQDPGRVFKGKKMAGQMGNKKVTTQNIKVID 183 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 +D + L++VKG VPG N ++ ++D+ K AV Sbjct: 184 IDSELNLLIVKGAVPGC-NNGYLYIKDAIKKAV 215 >gi|254569692|ref|XP_002491956.1| Mitochondrial ribosomal protein of the large subunit [Pichia pastoris GS115] gi|238031753|emb|CAY69676.1| Mitochondrial ribosomal protein of the large subunit [Pichia pastoris GS115] gi|328351549|emb|CCA37948.1| 50S ribosomal protein L3 [Pichia pastoris CBS 7435] Length = 262 Score = 207 bits (527), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 107/210 (50%), Positives = 145/210 (69%), Gaps = 2/210 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ K GM Y EG RIP TVL +D +V ++T+ +GY AVQVG G K+KN Sbjct: 52 RPGLIGVKRGMVPFYTNEGLRIPCTVLEIDQVEVTHNKTVANDGYSAVQVGYG-FKLKNQ 110 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +K M G F+ VSPK+K+ EF V+ DD LLPVG++ +F VG+ VD+ ++ GKGF+ Sbjct: 111 TKKMLGHFAKAQVSPKEKVVEFHVKSDDGLLPVGTLLKADHFKVGEFVDLQSISKGKGFA 170 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR NF GL+A+HGVS +HRS GSTG Q PGR KKMAGRMGG+ VT++N+EVV Sbjct: 171 GVMKRWNFHGLKASHGVSKAHRSAGSTGGNQTPGRTLPGKKMAGRMGGHNVTLQNVEVVD 230 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V+ ++G IL+KG V GA S++ ++D+ K Sbjct: 231 VNAEKGYILIKGPVSGA-TGSYVKIQDAIK 259 >gi|307106714|gb|EFN54959.1| hypothetical protein CHLNCDRAFT_48876 [Chlorella variabilis] Length = 234 Score = 207 bits (527), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 108/204 (52%), Positives = 139/204 (68%), Gaps = 2/204 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++ G R+P+TVL +D+CQVV +T DK GY A+Q+G+G + K + +RG F + Sbjct: 1 MTQEWDAWGVRVPLTVLWVDDCQVVQVKTDDKEGYTALQLGSGSKRPKQLRGTLRGHFDA 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 V+PK++L EFRV D LLPVG S+F GQ VDVTG +IGKGF G MKR F G Sbjct: 61 AGVAPKRRLAEFRVSPDA-LLPVGHELRASHFVAGQFVDVTGTSIGKGFQGVMKRWGFAG 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 A+HG S++HR+ GSTG QDPG+VFK KKM GRMGG RVTV+N +V VD R L+ V Sbjct: 120 QPASHGNSLAHRAAGSTGACQDPGKVFKGKKMPGRMGGERVTVQNNQVFRVDPLRNLLYV 179 Query: 192 KGCVPGAKKNSWILVRDSFKSAVN 215 +G VPG K N ++LVRDS K + Sbjct: 180 RGHVPGHKGN-FVLVRDSAKKTLE 202 >gi|300120599|emb|CBK20153.2| unnamed protein product [Blastocystis hominis] gi|300176505|emb|CBK24170.2| unnamed protein product [Blastocystis hominis] Length = 250 Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 106/196 (54%), Positives = 137/196 (69%), Gaps = 1/196 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GVVA K+GM +++ RIP TVL ++NCQVV +T +K ++QVGAG KVKNV Sbjct: 7 RTGVVALKIGMMPLWDKWCTRIPCTVLQIENCQVVQVKTKEKENTNSLQVGAGPVKVKNV 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G + SV V PK+ L EF+V +D LPVG+ + +F GQ V++ G+T GKGF Sbjct: 67 NKPLFGHYKSVGVEPKRYLTEFKVT-EDAFLPVGTELTCKHFVPGQRVNIQGITQGKGFQ 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G M+R F GL A+HGVS+SHRS GSTG R+DPG+ FK KKM GRMG TV+NL V Sbjct: 126 GVMRRWGFKGLGASHGVSVSHRSLGSTGQREDPGKTFKGKKMPGRMGNKNCTVQNLLVYK 185 Query: 182 VDDKRGLILVKGCVPG 197 +D KR L+ VKGCVPG Sbjct: 186 IDPKRNLVYVKGCVPG 201 >gi|50285271|ref|XP_445064.1| hypothetical protein [Candida glabrata CBS 138] gi|49524367|emb|CAG57964.1| unnamed protein product [Candida glabrata] Length = 263 Score = 205 bits (522), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 100/211 (47%), Positives = 145/211 (68%), Gaps = 2/211 (0%) Query: 2 RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R G V +K+GM ++ + G RI T+L +N +V++HR LD++GY+A QVG G V Sbjct: 50 RCGAVTQKVGMMPYFDEKTGERIAATILQFNNVEVLMHRRLDEDGYVACQVGYGNRSVDK 109 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS+ M G F+++NV+PK+K+ EFRV+ ++ LLP+G+ P +FT GQ +DV ++ GKGF Sbjct: 110 VSRQMLGHFATLNVNPKEKVTEFRVKNEEGLLPIGTHIKPDFFTEGQYLDVRSVSKGKGF 169 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNF GLRA+HG S+ HR GS G QDPGRV KKM G MG VTV+N++++ Sbjct: 170 AGVMKRHNFKGLRASHGTSVMHRHGGSYGQNQDPGRVLPGKKMPGHMGVQNVTVQNVKIL 229 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD+ +I VKG VPG +++ ++D+ K Sbjct: 230 KVDEANNVIWVKGAVPGP-NGTYVKIQDAIK 259 >gi|156848338|ref|XP_001647051.1| hypothetical protein Kpol_1050p50 [Vanderwaltozyma polyspora DSM 70294] gi|156117734|gb|EDO19193.1| hypothetical protein Kpol_1050p50 [Vanderwaltozyma polyspora DSM 70294] Length = 271 Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 103/212 (48%), Positives = 143/212 (67%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R GV+A+K GM ++ G R TVL L+N +V++HRTL NGY A QVG G+ Sbjct: 54 LRCGVIAQKKGMMPYFDENTGERTAATVLQLNNVEVLMHRTLKDNGYYACQVGFGDKDPS 113 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +VS+ M G F+S V+PK+ + EFRV+ + LLP+G++ PS+F GQ VD+ + GKG Sbjct: 114 HVSRQMLGHFASKIVNPKETVAEFRVKNESGLLPLGTLLKPSFFKPGQFVDLKSTSKGKG 173 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR +F GLRA+HG S+ HR GS G QDPGR+ KKM GRMGG VT++N+++ Sbjct: 174 FQGVMKRFHFAGLRASHGTSVMHRHGGSFGQNQDPGRILPGKKMPGRMGGKNVTIQNVQI 233 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 + VDD+ +I+VKG V G K S+I ++DS K Sbjct: 234 LKVDDENNVIIVKGSVAGP-KGSYIKLQDSIK 264 >gi|254579248|ref|XP_002495610.1| ZYRO0B15444p [Zygosaccharomyces rouxii] gi|238938500|emb|CAR26677.1| ZYRO0B15444p [Zygosaccharomyces rouxii] Length = 273 Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 99/214 (46%), Positives = 147/214 (68%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R G + +K GM ++ G+R+ TVL +DN +V++HRT+++NGY A QVG G + Sbjct: 56 LRCGALTKKEGMMPFFDEATGKRVACTVLKMDNVEVLMHRTMEENGYFACQVGYGSKHPQ 115 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 VS+ M G F+S V+PK+++ EFRV+ +D LLP+G++ PS+F GQ VD+ + GKG Sbjct: 116 KVSRQMLGHFASKLVNPKERVSEFRVKNEDGLLPLGTLIKPSFFNNGQYVDLKSICKGKG 175 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MK+++F GLRA+HG SI HR GS G QDPGRV KKM G MG + VT++N +V Sbjct: 176 FAGVMKKYHFAGLRASHGTSIMHRHGGSYGQNQDPGRVLPGKKMPGHMGNHHVTIQNAQV 235 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + VDD+ G+IL+KG V G +++ ++D+ K A Sbjct: 236 LKVDDELGVILIKGSVAGP-TGAFVKIQDAIKKA 268 >gi|310798524|gb|EFQ33417.1| 50S ribosomal protein L3 [Glomerella graminicola M1.001] Length = 347 Score = 202 bits (513), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 104/212 (49%), Positives = 145/212 (68%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+GV+A K GMT VY + +R+P TVL LD QVV ++T KNGY AVQ+GAG + +N Sbjct: 90 LRTGVLAIKKGMTAVYYGK-KRVPCTVLQLDQVQVVANKTRAKNGYWAVQIGAGSKEPRN 148 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V +P+ G++ + ++PK+ L EF+V+ ++ LLPVGS P +F GQ VDV + G GF Sbjct: 149 VERPLLGYYEAKGIAPKRHLAEFKVRSEEGLLPVGSQLFPDWFQTGQYVDVRSNSRGMGF 208 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179 +G MKRH F G A+HG S++HR+ G+TG Q G RV KKM GRMG RVTV+NL V Sbjct: 209 AGGMKRHGFAGQEASHGNSLNHRTIGTTGPSQGSGSRVLPGKKMPGRMGNERVTVQNLTV 268 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 + VD++ G++LVKG V G KN + ++D+ K Sbjct: 269 LKVDNELGVVLVKGAV-GGPKNCIVQLQDAKK 299 >gi|168018029|ref|XP_001761549.1| predicted protein [Physcomitrella patens subsp. patens] gi|162687233|gb|EDQ73617.1| predicted protein [Physcomitrella patens subsp. patens] Length = 258 Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 103/210 (49%), Positives = 144/210 (68%), Gaps = 2/210 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R+GV+A K GMT +++ G R+P+TVL +++ VV +T + +G+ A+Q+GAG+ K K Sbjct: 13 FRTGVIAVKCGMTAIWDKWGARVPMTVLWVNDNHVVQVKTEETDGHFALQIGAGQRKPKQ 72 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP G F + V K+ L EF V +D LLP+G+ S +F GQ VD+ G+T GKGF Sbjct: 73 LTKPELGHFRAAGVPLKQHLAEFPVT-EDALLPLGTELSVRHFRPGQYVDIAGITTGKGF 131 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G MKR F G+ A+HG S+SHRS GSTG RQDPG+VFK KKMAG MG R TVKN+ + Sbjct: 132 QGGMKRWGFAGMPASHGASLSHRSLGSTGGRQDPGKVFKGKKMAGHMGAVRRTVKNVWIY 191 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 ++ +R LI V+G VPG K N ++ +RD+F Sbjct: 192 KIEPERDLIWVRGQVPGHKGN-FVYIRDAF 220 >gi|307136201|gb|ADN34039.1| 50S ribosomal protein l3 [Cucumis melo subsp. melo] Length = 328 Score = 201 bits (511), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 105/214 (49%), Positives = 146/214 (68%), Gaps = 2/214 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GV+A K GM+ +++ G RIP+TVL +D+ V +T++K G A+Q+G G+ K K++ Sbjct: 79 RTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKEGITALQIGCGQKKEKHL 138 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SKP G F + V K+KL EF V +D LLPVG+ +F GQ VDVTG++ GKGF Sbjct: 139 SKPELGHFRAQGVPLKRKLKEFPVSQDA-LLPVGTEIGARHFVPGQYVDVTGISRGKGFQ 197 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F G+ A+HG S+SHRS GSTG R PG+VFK +KMAGRMGG + TVKN+ + Sbjct: 198 GVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGGKQRTVKNVWIYK 257 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +D R LI VKG +PGA + S++ ++D+ +N Sbjct: 258 IDPARNLIWVKGPIPGA-EGSFVFIKDAMYKRLN 290 >gi|170088428|ref|XP_001875437.1| predicted protein [Laccaria bicolor S238N-H82] gi|164650637|gb|EDR14878.1| predicted protein [Laccaria bicolor S238N-H82] Length = 315 Score = 201 bits (510), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 107/214 (50%), Positives = 137/214 (64%), Gaps = 5/214 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKN--GYMAVQVGAGEAK 57 +R+GV+ARK GMT ++N +G R PVTVL L+NCQV + R+ +N Y A+QV A + Sbjct: 47 IRTGVIARKRGMTALWNDQGVRYPVTVLQLENCQVTANIRSTRRNHTEYHAIQVAASDKP 106 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 K + M G F V PK+ + EF + D + PVG+ S +F GQ VDV +IG Sbjct: 107 AKGTTNQMLGHFRKAAVPPKRIVREFPITPDAHI-PVGTTLSAVHFVPGQFVDVVANSIG 165 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF G MKR F GL A+HGVS+SHRS GSTG QDPGR+F KKMAG MG R+T +NL Sbjct: 166 KGFQGGMKRWGFHGLAASHGVSVSHRSSGSTGQHQDPGRIFPGKKMAGHMGNKRITTQNL 225 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VV VD LI V+G VPG N+ +L+RD+ K Sbjct: 226 AVVRVDTALDLIFVRGAVPGV-DNAHVLIRDAKK 258 >gi|50555650|ref|XP_505233.1| YALI0F10076p [Yarrowia lipolytica] gi|49651103|emb|CAG78040.1| YALI0F10076p [Yarrowia lipolytica] Length = 277 Score = 201 bits (510), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 102/200 (51%), Positives = 137/200 (68%), Gaps = 2/200 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE--AKVK 59 R+G +A K GM Y+ G +P TVL +D CQVV H+T +K+GY AVQVG G ++ Sbjct: 48 RTGALAFKRGMISWYDENGVHMPATVLEIDLCQVVGHKTEEKHGYNAVQVGMGHRNKALQ 107 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++K G FS+ V+PK+ + EFR++ D LLP+ + + S+F VGQ VDV + GKG Sbjct: 108 KMNKSKLGQFSAATVNPKQAVAEFRIRGKDGLLPITTEITASHFKVGQYVDVQATSKGKG 167 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG MKRH F GL A+HGVS+ HRS G+TG DPGRVF +KMAG MG VT+KN +V Sbjct: 168 FSGVMKRHGFSGLPASHGVSLKHRSGGTTGQNTDPGRVFPGRKMAGNMGNETVTLKNQKV 227 Query: 180 VSVDDKRGLILVKGCVPGAK 199 +SVD+ G+++VKG VPG+K Sbjct: 228 LSVDEDTGIVIVKGMVPGSK 247 >gi|194689948|gb|ACF79058.1| unknown [Zea mays] Length = 254 Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 104/208 (50%), Positives = 146/208 (70%), Gaps = 2/208 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GV+ K GM+ +++ G ++P+TVL +D+ V +T +K G+ A+Q+GAG+ K K++ Sbjct: 7 RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVTQVKTAEKEGFFALQLGAGQKKEKHL 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F + V K+KL EF V +D LLPVG+ + +F GQ VDVTG+T GKGF+ Sbjct: 67 TKPEVGHFRAQGVPLKRKLREFPVT-EDALLPVGTSITVRHFVPGQFVDVTGITKGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR+ FGG+ A+HG S++HRS GSTG R PGRVFKN+KM GRMGG + TVKN+ V Sbjct: 126 GVMKRYGFGGMPASHGTSLAHRSGGSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209 +D R L+ +KG VPG + S+I V+DS Sbjct: 186 IDPARNLLYLKGQVPGP-QGSFIFVKDS 212 >gi|229594830|ref|XP_001032401.3| ribosomal protein L3 containing protein [Tetrahymena thermophila] gi|225566556|gb|EAR84738.3| ribosomal protein L3 containing protein [Tetrahymena thermophila SB210] Length = 439 Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 100/214 (46%), Positives = 144/214 (67%), Gaps = 2/214 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++ KLGMT +++ G+ +TV+ +D CQVV +T +K+G A+Q+G GE +K + Sbjct: 185 RTGILGYKLGMTSIWDKWGKLHALTVIQIDRCQVVQVKTEEKDGVNALQLGVGEKSLKRI 244 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G ++ PK+ L EF+V D LP G + S +F GQ VD+ G+++GKGF+ Sbjct: 245 NKPTIGHLMKNDIPPKRHLKEFKV-SPDCFLPAGYMLSARHFVPGQYVDIQGISVGKGFA 303 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR NF ATHG S+SHR+ GSTG RQDPGRVFKNKKMAG MG +VT+ +L+V Sbjct: 304 GTVKRWNFKMQDATHGNSLSHRAPGSTGQRQDPGRVFKNKKMAGHMGCEKVTIMDLQVYK 363 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +D +R L+ ++G VPG K S + +RD+FK V Sbjct: 364 IDVERSLVYIRGHVPG-KPGSLVQIRDAFKKQVQ 396 >gi|255556584|ref|XP_002519326.1| 50S ribosomal protein L3, putative [Ricinus communis] gi|223541641|gb|EEF43190.1| 50S ribosomal protein L3, putative [Ricinus communis] Length = 311 Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 102/208 (49%), Positives = 143/208 (68%), Gaps = 2/208 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K GMT +++ G R+P+TVL +D+ V +T++K G A+Q+G G K K++ Sbjct: 65 RTGIIALKCGMTALWDKWGERVPITVLWVDDNIVTQVKTVEKEGIFALQIGYGHKKAKHL 124 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F + NV K+KL EF V +D L+PVG+ +F GQ VD+TG+T GKGF Sbjct: 125 TKPEVGHFRAHNVPLKRKLREFPVT-EDALIPVGTSLGVRHFVPGQFVDITGITRGKGFQ 183 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F G+ ATHG S+SHRS GSTG R PG+VFK KKM GRMGG + TVKN+ V Sbjct: 184 GGMKRHGFKGMPATHGASLSHRSGGSTGQRDAPGKVFKGKKMPGRMGGVQRTVKNVWVYK 243 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209 +D R ++ V+G VPGA+ N ++ ++D+ Sbjct: 244 IDPTRNMMWVRGQVPGAEGN-FVFIKDA 270 >gi|326490890|dbj|BAJ90112.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 313 Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 105/208 (50%), Positives = 144/208 (69%), Gaps = 2/208 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GV+ K GM+ +++ G ++P+TVL +D+ V +T +K G+ A+Q+GAG+ K K++ Sbjct: 66 RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVCQVKTAEKEGFYALQLGAGQKKEKHL 125 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F S V K+KL EF V +D LLPVG+ S +F GQ VDV G+T GKGF+ Sbjct: 126 TKPEVGHFRSQGVPLKRKLKEFPVT-EDALLPVGTTISVRHFVPGQFVDVIGITKGKGFA 184 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F G+ A+HG S+SHRS GSTG R PGRVFKN+KM GRMGG + TVKN+ V Sbjct: 185 GGMKRHGFSGMPASHGASLSHRSIGSTGQRDSPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 244 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209 +D R L+ +KG VPG + S++ V+DS Sbjct: 245 IDPARNLLYLKGQVPGP-QGSFLFVKDS 271 >gi|50309329|ref|XP_454671.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49643806|emb|CAG99758.1| KLLA0E16039p [Kluyveromyces lactis] Length = 273 Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 100/212 (47%), Positives = 146/212 (68%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R G +++K+GM + E G+RI TVL LDN +V++HRT +N Y A Q+G G + Sbjct: 58 LRCGALSKKVGMMPYFEKETGKRIAATVLQLDNNEVILHRTPAENNYWACQIGYGNKSPE 117 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV++ M G F++ V+PK+K+ EFRV+ + LLPVGS+ PS+F GQ VD+ ++ GKG Sbjct: 118 NVTRQMLGHFAAHVVNPKEKVTEFRVKDESGLLPVGSLIKPSWFKPGQYVDLRSISKGKG 177 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR+ F GL+A+HGVS+SHRS GS G Q PGRV KKM G MG + VT++N++V Sbjct: 178 FQGVMKRYGFKGLKASHGVSVSHRSGGSYGQNQTPGRVLPGKKMPGHMGVDTVTIQNVQV 237 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 + V+D+ G +LVKG V G +++ ++D+ K Sbjct: 238 LDVNDETGTVLVKGSVAGP-NGAFVKIQDAIK 268 >gi|281212110|gb|EFA86271.1| ribosomal protein L3 [Polysphondylium pallidum PN500] Length = 338 Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 107/208 (51%), Positives = 141/208 (67%), Gaps = 3/208 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G + +K+GMT V+ ++ IPVTV+HL N QVV + +G A+QVGA E ++KNV Sbjct: 59 RVGAIGKKVGMTTVW-VDHVAIPVTVVHLPNNQVVQVKHKVNDGVDALQVGADEIRLKNV 117 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 M+G F+ +V PK+ L EF V ++ LPVG+ +P +F GQLV + G++ GKGF Sbjct: 118 KGTMKGHFAKADVPPKRILMEFPVTRNA-FLPVGTQITPRHFVPGQLVTIKGVSTGKGFQ 176 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR NF GL ATHGVS+SHRS GSTGCRQ PGRVFK KKM G +G TV NL+V+ Sbjct: 177 GGMKRWNFSGLAATHGVSVSHRSIGSTGCRQTPGRVFKGKKMPGHLGSESTTVLNLQVIQ 236 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209 + + G I++KG VPG KK S+I + DS Sbjct: 237 CNTELGTIMLKGAVPG-KKGSYIRIIDS 263 >gi|212274775|ref|NP_001130722.1| hypothetical protein LOC100191826 [Zea mays] gi|195627984|gb|ACG35822.1| 50S ribosomal protein L3-2 [Zea mays] Length = 318 Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 104/208 (50%), Positives = 145/208 (69%), Gaps = 2/208 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GV+ K GM+ +++ G ++P+TVL +D+ V +T +K G+ A+Q+GAG+ K K++ Sbjct: 71 RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVTQVKTAEKEGFFALQLGAGQKKEKHL 130 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F + V K+KL EF V +D LLPVG+ + +F GQ VDVTG+T GKGF+ Sbjct: 131 TKPEVGHFRAQGVPLKRKLREFPVT-EDALLPVGTSITVRHFVPGQFVDVTGITKGKGFA 189 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR+ FGG A+HG S++HRS GSTG R PGRVFKN+KM GRMGG + TVKN+ V Sbjct: 190 GVMKRYGFGGXPASHGTSLAHRSGGSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 249 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209 +D R L+ +KG VPG + S+I V+DS Sbjct: 250 IDPARNLLYLKGQVPGP-QGSFIFVKDS 276 >gi|242219427|ref|XP_002475493.1| mitochondrial 50S ribosomal protein L3 [Postia placenta Mad-698-R] gi|220725308|gb|EED79301.1| mitochondrial 50S ribosomal protein L3 [Postia placenta Mad-698-R] Length = 269 Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 105/219 (47%), Positives = 143/219 (65%), Gaps = 5/219 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTL--DKNGYMAVQVGAGEAK 57 +R+G++ARK GMT +++ G R PVTVL L+NCQV + +T+ D + Y AVQV A + Sbjct: 1 VRTGLIARKRGMTVMWDDHGARFPVTVLQLENCQVTANIKTVRKDLSEYHAVQVAATDRP 60 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 K +K M G F V PK+ + EF V D + P+G+ S +F GQ VDV ++G Sbjct: 61 AKTATKQMLGHFKKAGVDPKRIVKEFPVTPDAHV-PIGTTLSAVHFVPGQYVDVIANSLG 119 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF G MK+ NF GLRA+HGVS+SHRS G+ G QDPGRV+ KKMAGR+GG R T +NL Sbjct: 120 KGFQGTMKKWNFKGLRASHGVSVSHRSAGAIGAHQDPGRVWPGKKMAGRLGGVRTTTQNL 179 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 V+ VD LI V+GCVPG ++ ++VRD+ K ++ Sbjct: 180 AVIRVDSALDLIFVRGCVPGI-DDAHVMVRDAKKKMISV 217 >gi|118486756|gb|ABK95213.1| unknown [Populus trichocarpa] Length = 315 Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 108/208 (51%), Positives = 143/208 (68%), Gaps = 2/208 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GVVA K GMT +++ G RIP+TVL +D+ V +T++K G+ A+QVG G+ K K++ Sbjct: 69 RTGVVAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTVEKEGFFALQVGCGQKKEKHL 128 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F + V K+KL EF V +D LLPVG+ +F GQ VDV G+T+GKGF Sbjct: 129 TKPEVGHFRAQGVPMKRKLREFPVT-EDALLPVGTYVGVRHFVPGQFVDVAGITMGKGFQ 187 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F G A+HG S+SHRS GSTG R PG+VFK KKM GRMGG + TVKN+ V Sbjct: 188 GGMKRHGFKGGPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGVQRTVKNVWVYK 247 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209 +D R L+ VKG VPGA+ N ++ ++DS Sbjct: 248 IDPARNLMWVKGQVPGAEGN-FVFIKDS 274 >gi|294101628|ref|YP_003553486.1| 50S ribosomal protein L3 [Aminobacterium colombiense DSM 12261] gi|293616608|gb|ADE56762.1| 50S ribosomal protein L3 [Aminobacterium colombiense DSM 12261] Length = 208 Score = 197 bits (502), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 104/203 (51%), Positives = 136/203 (66%), Gaps = 5/203 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RKLGMT +YN G+ +PVTV+ C VV +T +KNGY AVQ+G GE K Sbjct: 1 MSIGILGRKLGMTQIYNEAGQAVPVTVIQAGPCPVVSLKTPEKNGYSAVQLGFGEIKPHK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118 ++KP++G F +V P++ L EFR+ D++ VG + S F G+ ++V GM+ GK Sbjct: 61 LTKPVKGQFDKASVEPQRYLREFRL---DNVKGYEVGQAITVSLFEEGEKINVVGMSKGK 117 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF+G MKR NFGG ATHGVS +HR GS+G PG++FK K M GRMGG RVTVKNL Sbjct: 118 GFAGVMKRFNFGGTFATHGVSKTHRHGGSSGASSYPGKIFKGKAMPGRMGGERVTVKNLT 177 Query: 179 VVSVDDKRGLILVKGCVPGAKKN 201 VV+VD L+LVKG VPGAK + Sbjct: 178 VVAVDTDNNLLLVKGAVPGAKND 200 >gi|242052463|ref|XP_002455377.1| hypothetical protein SORBIDRAFT_03g009550 [Sorghum bicolor] gi|241927352|gb|EES00497.1| hypothetical protein SORBIDRAFT_03g009550 [Sorghum bicolor] Length = 318 Score = 197 bits (502), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 103/208 (49%), Positives = 144/208 (69%), Gaps = 2/208 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GV+ K GM+ +++ G ++P+TVL +D+ V +T +K G+ A+Q+GAG+ K K++ Sbjct: 71 RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVTQVKTAEKEGFFALQLGAGQKKEKHL 130 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F + V K+KL EF V +D LLPVG+ + +F GQ VDVTG+T GKGF+ Sbjct: 131 TKPEVGHFRAQGVPLKRKLREFPVT-EDALLPVGTTITVRHFLPGQFVDVTGITKGKGFA 189 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MK+H F G A+HG S+SHRS GSTG R PGRVFKN+KM GRMGG + TVKN+ V Sbjct: 190 GVMKKHGFSGGPASHGASLSHRSGGSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 249 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209 +D R L+ +KG VPG + S++ V+DS Sbjct: 250 IDPARNLLYLKGQVPGP-QGSFVFVKDS 276 >gi|218187896|gb|EEC70323.1| hypothetical protein OsI_01192 [Oryza sativa Indica Group] Length = 319 Score = 197 bits (501), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 102/208 (49%), Positives = 145/208 (69%), Gaps = 2/208 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GV+ K GM+ +++ G ++P+TVL +D+ V +T +K G+ A+Q+GAG+ K K++ Sbjct: 74 RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVCQVKTAEKEGFFALQLGAGQKKEKHL 133 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F + V K+KL EF V +D L+P+G+ + +F GQ VDVTG+T GKGF+ Sbjct: 134 TKPEVGHFRAQGVPLKRKLREFPVT-EDALIPLGTTITVRHFVPGQFVDVTGITKGKGFA 192 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F G+ A+HG S+SHRS GSTG R PGRVFKN+KM GRMGG + TVKN+ V Sbjct: 193 GGMKRHGFSGMPASHGASLSHRSIGSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 252 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209 +D R L+ +KG VPG + S++ V+DS Sbjct: 253 IDPARNLLYLKGQVPGP-QGSFVFVKDS 279 >gi|115435682|ref|NP_001042599.1| Os01g0251100 [Oryza sativa Japonica Group] gi|7106521|dbj|BAA92206.1| putative ribosomal protein L3 [Oryza sativa Japonica Group] gi|113532130|dbj|BAF04513.1| Os01g0251100 [Oryza sativa Japonica Group] gi|215678787|dbj|BAG95224.1| unnamed protein product [Oryza sativa Japonica Group] gi|215707174|dbj|BAG93634.1| unnamed protein product [Oryza sativa Japonica Group] gi|222618109|gb|EEE54241.1| hypothetical protein OsJ_01115 [Oryza sativa Japonica Group] Length = 319 Score = 197 bits (501), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 102/208 (49%), Positives = 145/208 (69%), Gaps = 2/208 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GV+ K GM+ +++ G ++P+TVL +D+ V +T +K G+ A+Q+GAG+ K K++ Sbjct: 74 RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVCQVKTAEKEGFFALQLGAGQKKEKHL 133 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F + V K+KL EF V +D L+P+G+ + +F GQ VDVTG+T GKGF+ Sbjct: 134 TKPEVGHFRAQGVPLKRKLREFPVT-EDALIPLGTTITVRHFVPGQFVDVTGITKGKGFA 192 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F G+ A+HG S+SHRS GSTG R PGRVFKN+KM GRMGG + TVKN+ V Sbjct: 193 GGMKRHGFSGMPASHGASLSHRSIGSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 252 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209 +D R L+ +KG VPG + S++ V+DS Sbjct: 253 IDPARNLLYLKGQVPGP-QGSFVFVKDS 279 >gi|224110272|ref|XP_002315468.1| predicted protein [Populus trichocarpa] gi|222864508|gb|EEF01639.1| predicted protein [Populus trichocarpa] Length = 320 Score = 197 bits (501), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 106/208 (50%), Positives = 143/208 (68%), Gaps = 2/208 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GV+A K GMT +++ G RIP+TVL +D+ V +T++K G+ A+QVG G+ K K++ Sbjct: 74 RTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTVEKEGFFALQVGCGQKKEKHL 133 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F + V K+KL EF V ++ LLPVG+ +F GQ VDV G+T+GKGF Sbjct: 134 TKPEVGHFRAQGVPMKRKLREFPV-TENALLPVGTCIGVRHFVPGQFVDVAGITMGKGFQ 192 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F G A+HG S+SHRS GSTG R PG+VFK KKM GRMGG + TVKN+ V Sbjct: 193 GGMKRHGFKGGPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGVQRTVKNVWVYK 252 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209 +D R L+ VKG VPGA+ N ++ ++DS Sbjct: 253 IDPARNLMWVKGQVPGAEGN-FVFIKDS 279 >gi|37912991|gb|AAR05320.1| ribosomal protein L3 [uncultured marine alpha proteobacterium HOT2C01] Length = 229 Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 104/211 (49%), Positives = 141/211 (66%), Gaps = 4/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GM+ +Y G IPVTVLH++NC+++ T + V VGA K+K Sbjct: 1 MRSGIIAKKIGMSNLYTQSGTNIPVTVLHVENCKIIDRVTSENENSDKVLVGA--CKLKK 58 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 K +GFF K L EF + KD ++ G S+F GQ +DV+G T GKGF Sbjct: 59 TKKSQKGFFDKKKTDAYKYLREFEISKDQEI-KSGDELKASHFKEGQFIDVSGYTKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNF GLRA+HGVS+SHRSHGSTG QDPG+VFK KKMAG+ G T+++L+VV Sbjct: 118 AGVMKRHNFSGLRASHGVSVSHRSHGSTGQCQDPGKVFKGKKMAGQYGDVHKTLQSLQVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD+++ LI VKG PG+ + +W++V DS K Sbjct: 178 KVDEQKNLICVKGATPGS-RGTWLVVEDSIK 207 >gi|18401521|ref|NP_566579.1| RPL3P (RIBOSOMAL PROTEIN L3 PLASTID); structural constituent of ribosome [Arabidopsis thaliana] gi|42559534|sp|Q9LRN8|RK3B_ARATH RecName: Full=50S ribosomal protein L3-2, chloroplastic; Flags: Precursor gi|11994685|dbj|BAB02923.1| 50S ribosomal protein L3 [Arabidopsis thaliana] Length = 324 Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 101/209 (48%), Positives = 146/209 (69%), Gaps = 2/209 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K GMT +++ G+RIP+++L +D+ V +T++K G A+Q+G G+ K K++ Sbjct: 76 RTGIIAVKCGMTALWDKWGKRIPISILWVDDNIVSQVKTVEKEGIFALQIGCGQKKPKHL 135 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SK + G F + V K+KL EF V +D LLPVG+ +F GQ VDVTG+T GKGF Sbjct: 136 SKAVVGHFRAQGVPLKRKLREFPVT-EDALLPVGTSLGVRHFVPGQYVDVTGITRGKGFQ 194 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F G+ A+HG S+SHRS GSTG R PG+VFK +KMAGRMG ++ TVKN+ V Sbjct: 195 GCMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGADQRTVKNVWVYK 254 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 +D R L+ V+G VPGA+ N ++ ++D++ Sbjct: 255 IDPARNLMWVRGQVPGAEGN-FVFIKDAW 282 >gi|117924155|ref|YP_864772.1| 50S ribosomal protein L3P [Magnetococcus sp. MC-1] gi|212288406|sp|A0L5X3|RL3_MAGSM RecName: Full=50S ribosomal protein L3 gi|117607911|gb|ABK43366.1| LSU ribosomal protein L3P [Magnetococcus sp. MC-1] Length = 214 Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 105/211 (49%), Positives = 141/211 (66%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++ RKLGM+ ++ +G+RIPVT++ L C VV R+ +++GY AVQ+G EAK Sbjct: 1 MRSGLIGRKLGMSQMFTEDGQRIPVTLVQLGPCAVVAKRSDEQDGYNAVQLGFEEAKPSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SK +RG ++ NV+P++ L EFRV + + VG + F V VDVTG T+GKGF Sbjct: 61 LSKTVRGQYAKANVTPRRVLREFRV-SNPESYEVGQELTAEQFAVDSFVDVTGKTVGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR F G RA+HG HRS GS G Q PGRV+KNKKMAG MG TV+NL+V Sbjct: 120 AGVMKRWGFRGGRASHGAHKVHRSGGSIGQCQTPGRVYKNKKMAGHMGQQTRTVQNLKVA 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + +I VKG +PG+ K S +LVRD+ K Sbjct: 180 YVDAVQSIIAVKGSIPGS-KGSLVLVRDALK 209 >gi|303287272|ref|XP_003062925.1| predicted protein [Micromonas pusilla CCMP1545] gi|226455561|gb|EEH52864.1| predicted protein [Micromonas pusilla CCMP1545] Length = 221 Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 104/211 (49%), Positives = 139/211 (65%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R G +A K+GMT +N G R+P+TVL +D C+VV +T +K GY A+Q+GAG K K Sbjct: 4 QRVGALAVKVGMTQEWNEHGARVPLTVLWIDECEVVQAKTPEKEGYAALQMGAGSKKRKQ 63 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++ G F++ V K++L EFRV D +LPVG+V S+F GQ VD+ G TIGKGF Sbjct: 64 ITGAEYGHFAARGVQIKRELSEFRV-TPDAILPVGTVVDASHFLAGQYVDIQGKTIGKGF 122 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G MKR F GL A+HG + HR+HGS G QDPGRV+K KKMAG+MG TV+N V Sbjct: 123 QGPMKRWGFAGLPASHGTTKKHRAHGSIGNSQDPGRVWKGKKMAGQMGNRTRTVQNCFVY 182 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R LI V G VPG K+ +++ V+D+ + Sbjct: 183 RVDPERNLIYVVGQVPG-KRGNFVRVKDALR 212 >gi|302307337|ref|NP_983967.2| ADL129Wp [Ashbya gossypii ATCC 10895] gi|299788953|gb|AAS51791.2| ADL129Wp [Ashbya gossypii ATCC 10895] Length = 267 Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 97/212 (45%), Positives = 145/212 (68%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R GV+ RK+GM +++ G R+ TVL ++N +VV+ +T+ NGY A QVG G Sbjct: 50 LRCGVLTRKVGMMPYFDVATGARMAATVLEMNNVEVVLQKTVAANGYWACQVGYGNKHPS 109 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V++ + G F+S V+PK+K+ EFRV+ ++ LLPVG++ PS+F+ GQ VD+ ++ GKG Sbjct: 110 KVTRQLLGHFASKEVNPKEKVTEFRVKNEEGLLPVGTLLKPSFFSPGQYVDLRSVSKGKG 169 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR+NF G +A+HG S+SHR GS G Q PGR+ KKM G MG RVT++N++V Sbjct: 170 FQGVMKRYNFKGQKASHGNSLSHRKGGSYGQNQTPGRILPGKKMPGHMGVQRVTIQNVQV 229 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 + V D +G+I+VKG V G K +++ V+D+ K Sbjct: 230 LEVQDSKGVIIVKGSVAGP-KGAFVKVQDAIK 260 >gi|73667228|ref|YP_303244.1| 50S ribosomal protein L3 [Ehrlichia canis str. Jake] gi|109893428|sp|Q3YRK9|RL3_EHRCJ RecName: Full=50S ribosomal protein L3 gi|72394369|gb|AAZ68646.1| LSU ribosomal protein L3P [Ehrlichia canis str. Jake] Length = 231 Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 104/214 (48%), Positives = 150/214 (70%), Gaps = 5/214 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+ K+G T +++ EG+RIPVT+LHL + ++ +T D NGY AV +G E+ V N+ Sbjct: 4 RIGLFLEKVGHTAIFDNEGKRIPVTLLHLRDSFIISTKTKDINGYNAVVLGV-ESSV-NI 61 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP N++ K ++FE RV D ++ G+ S ++F Q +DVTG ++GKGF+ Sbjct: 62 KKPQLKILEKSNITAKCRIFESRVDNLDGIVK-GAKISITHFVENQYIDVTGYSLGKGFA 120 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF GL+A+HGVSI+HRS GSTG QDPGRV+K KKMAG +G ++VTV+NL+V+ Sbjct: 121 GVMKRHNFKGLKASHGVSIAHRSQGSTGQCQDPGRVYKGKKMAGHLGSSKVTVQNLKVIL 180 Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAV 214 VD +R L++VKG +PGA K S++ V+D+ K +V Sbjct: 181 VDQERSLLVVKGNNIPGA-KGSYVFVKDAVKKSV 213 >gi|299473316|emb|CBN77715.1| Ribosomal protein L3 [Ectocarpus siliculosus] Length = 369 Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 107/213 (50%), Positives = 139/213 (65%), Gaps = 2/213 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 RSG +A K+G +++ G R PVTVL LD C+VV +T + +GY ++Q+G GE K KNV Sbjct: 117 RSGALAMKVGSMAIFDSWGVRHPVTVLQLDECEVVQVKTTETDGYTSLQLGVGERKTKNV 176 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP F V+PK+KL EFRV + LLPVG +F GQ VDV G + GKGF Sbjct: 177 NKPDAERFRRAGVNPKRKLMEFRVSAEA-LLPVGFQLRAQHFVAGQKVDVCGTSKGKGFQ 235 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR F G RA+HGVS + R GSTG QDPGRVFK KKM GRMG +RVTV+NL+++ Sbjct: 236 GGMKRWGFKGQRASHGVSKTPRHIGSTGQCQDPGRVFKGKKMPGRMGTDRVTVQNLKILK 295 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 +D R L+ V+G VPG + ++ V D+ K A Sbjct: 296 MDPVRELLFVRGHVPG-QNGGFVRVTDAIKGAA 327 >gi|255712065|ref|XP_002552315.1| KLTH0C02002p [Lachancea thermotolerans] gi|238933694|emb|CAR21877.1| KLTH0C02002p [Lachancea thermotolerans] Length = 268 Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 99/213 (46%), Positives = 141/213 (66%), Gaps = 2/213 (0%) Query: 2 RSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R G ++ K GM ++ G R+ TVL L+N +V++HR L NGY A QVG G Sbjct: 54 RCGALSLKRGMIPYFDEASGNRVAATVLELNNVEVIMHRNLKDNGYFACQVGFGSKHPSK 113 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS+ M G F+S V+PK+K+ EFRV+ LLP+G++ PS+F GQ VD+ ++ GKGF Sbjct: 114 VSRQMLGHFASKIVNPKEKVVEFRVKDQSGLLPLGTLIKPSFFMPGQYVDLRSISKGKGF 173 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR+NF GL+A+HGVS+SHR GS G Q PGRV KKM G MG +VT++N +++ Sbjct: 174 AGVMKRYNFKGLKASHGVSVSHRKGGSYGQNQTPGRVLPGKKMPGHMGVQQVTIQNSQIL 233 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VDD+ G+++VKG V G K ++ ++D+ K A Sbjct: 234 KVDDENGVVIVKGSVAGP-KGGFVRIQDAIKKA 265 >gi|67528204|ref|XP_661912.1| hypothetical protein AN4308.2 [Aspergillus nidulans FGSC A4] gi|40741279|gb|EAA60469.1| hypothetical protein AN4308.2 [Aspergillus nidulans FGSC A4] gi|259482889|tpe|CBF77796.1| TPA: 50S ribosomal protein L3 (AFU_orthologue; AFUA_4G06000) [Aspergillus nidulans FGSC A4] Length = 296 Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 107/224 (47%), Positives = 143/224 (63%), Gaps = 12/224 (5%) Query: 2 RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R+G +A K GMT +++ E G+RI TVL LD QV+ H+T+D +GY AVQ+GAG N Sbjct: 72 RTGAIAIKKGMTAIFDPETGKRISCTVLQLDRVQVIAHKTVDVHGYYAVQMGAGWKHPNN 131 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K + G FS VSPK+ ++EFRV+ +D LLPVG + + +F GQ VD T GKGF Sbjct: 132 VTKSLLGHFSEQGVSPKRHVYEFRVKDEDGLLPVGQLVNADWFHEGQYVDARSNTKGKGF 191 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179 +G MKRH FGG +HGVS++HRS GS G Q G RV+ KKMAG MG + TV+NL+V Sbjct: 192 AGVMKRHGFGGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLKV 251 Query: 180 VSVDDKRGLILVKGCVPGAK----------KNSWILVRDSFKSA 213 + VD + GL+LV G V G K K W + +S +S+ Sbjct: 252 LKVDAENGLVLVNGSVSGPKGCVVRIQDAIKKPWPVNPESAQSS 295 >gi|322710687|gb|EFZ02261.1| 60S ribosomal protein L3 [Metarhizium anisopliae ARSEF 23] Length = 639 Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 99/200 (49%), Positives = 136/200 (68%), Gaps = 2/200 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+GV+A K GMT ++ + RIP TVL LD QVV ++T +K+GY AVQ+GAG + +N Sbjct: 382 LRAGVLATKKGMTSMF-VGKTRIPCTVLQLDQVQVVANKTREKHGYWAVQIGAGSRQPRN 440 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ PM G++ + ++PK +L EF V+ + LLPVGS P +F GQ+VDV + G GF Sbjct: 441 VTSPMLGYYEAKGIAPKSQLAEFTVRGREGLLPVGSQLLPDWFQTGQIVDVRAKSRGMGF 500 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179 +G MKRH F G A+HG S +HR+ G+TG Q G RV KKM GRMG VTV+NL+V Sbjct: 501 AGGMKRHGFAGQEASHGNSKNHRTIGTTGPSQGSGSRVLPGKKMPGRMGNEWVTVQNLKV 560 Query: 180 VSVDDKRGLILVKGCVPGAK 199 + VD++ G++LV G VPG K Sbjct: 561 MKVDNELGIVLVSGAVPGPK 580 >gi|164663113|ref|XP_001732678.1| hypothetical protein MGL_0453 [Malassezia globosa CBS 7966] gi|159106581|gb|EDP45464.1| hypothetical protein MGL_0453 [Malassezia globosa CBS 7966] Length = 336 Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 102/219 (46%), Positives = 143/219 (65%), Gaps = 7/219 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-----RTLDKNGYMAVQVGAGE 55 +R G++ RK GMT ++ +G R+P TVL++D+ QV +H + D+ YMA+QV A + Sbjct: 64 LRVGLITRKKGMTTMFMPDGTRVPATVLYVDSNQVSMHVQRDAPSQDEAPYMALQVAASD 123 Query: 56 AKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMT 115 A+ VS P+RG S + PK+ + EFRV D +LP+G+ S ++F GQ VDV +T Sbjct: 124 ARESAVSAPVRGHLSRAGLGPKRVIKEFRVTPDA-MLPIGTQLSAAHFVPGQDVDVRAIT 182 Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175 GKGF+G MKRHNF G A+HG S++HR+ GS G QDPGRV+ K+M GRMGG+ TV+ Sbjct: 183 RGKGFAGVMKRHNFAGGNASHGASLAHRTPGSVGNNQDPGRVWPGKRMPGRMGGHYRTVQ 242 Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 N+ V+ +D K LI VKG VPG + V+D+ KS V Sbjct: 243 NVRVLRIDVKNELIFVKGQVPGPDGGV-VFVQDALKSMV 280 >gi|255083651|ref|XP_002508400.1| predicted protein [Micromonas sp. RCC299] gi|226523677|gb|ACO69658.1| predicted protein [Micromonas sp. RCC299] Length = 259 Score = 194 bits (494), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 102/210 (48%), Positives = 137/210 (65%), Gaps = 2/210 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 RSG +A K GMT +N G R+P+TVL +D+C+V +T +K GY A+Q+GAG K K + Sbjct: 14 RSGAIAVKCGMTAEWNEHGVRVPLTVLWIDDCRVTQVKTQEKEGYTALQLGAGSKKAKRL 73 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 ++ RG F + +V +L EFRV D +LPVG+ S+F+ GQ VD+ G TIGKGF Sbjct: 74 NRSERGHFIAGDVPFSAELTEFRVSPDA-ILPVGTAIGASHFSAGQYVDIQGRTIGKGFQ 132 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR F GL A+HG + HR+HGS G QDPGRV+K KKMAGRMG TV+++ V Sbjct: 133 GPMKRWGFSGLPASHGTTKKHRAHGSIGNSQDPGRVWKGKKMAGRMGNRTRTVQSVFVYK 192 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD R L+ VKG VPG K ++ + D+ + Sbjct: 193 VDADRNLLYVKGQVPG-KAGRFLKITDALR 221 >gi|262277094|ref|ZP_06054887.1| 50S ribosomal protein L3 [alpha proteobacterium HIMB114] gi|262224197|gb|EEY74656.1| 50S ribosomal protein L3 [alpha proteobacterium HIMB114] Length = 260 Score = 194 bits (494), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 104/212 (49%), Positives = 139/212 (65%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V +KLGMT + G +PVTVL ++ +VV +K GY AV VG G K Sbjct: 1 MAIGLVGKKLGMTQRFFENGESLPVTVLKIEKAKVVDVINKEKRGYSAVLVGYGHIKNSK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++K M+GFF+ + PKK L EFR++ +L P G+ + + VDV TIGKGF Sbjct: 61 LTKQMKGFFAKKSQEPKKILKEFRLENTKELKP-GTEINLDVLKDKKYVDVRAKTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G+MKRHNFGG+RATHGVSISHR+HGSTG QDPG+VFK KKMAG MG T LEVV Sbjct: 120 AGSMKRHNFGGMRATHGVSISHRAHGSTGQCQDPGKVFKGKKMAGHMGAKYRTTLGLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D + L+ +KG VPG+ KNS++ ++++ K+ Sbjct: 180 EADLENNLLYLKGAVPGS-KNSYVEIQEAIKN 210 >gi|115400825|ref|XP_001216001.1| 60S ribosomal protein L9, mitochondrial precursor [Aspergillus terreus NIH2624] gi|114191667|gb|EAU33367.1| 60S ribosomal protein L9, mitochondrial precursor [Aspergillus terreus NIH2624] Length = 335 Score = 194 bits (494), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 106/201 (52%), Positives = 134/201 (66%), Gaps = 2/201 (0%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G VA K GMT VY+ GRRI TVL LD QVV H+T ++GY AVQVGAG Sbjct: 113 LRTGAVAIKKGMTGVYDAATGRRIACTVLQLDRVQVVAHKTRPQHGYYAVQVGAGWKHPS 172 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV+K + G FS+ VSPK+ +FEFRV+ + LLPVG S+F GQ VD T GKG Sbjct: 173 NVTKSLLGHFSAHGVSPKRHVFEFRVRDEAGLLPVGRDIPASWFREGQFVDARSTTKGKG 232 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKRH FGG +HGVS++HRS GS G Q G RV+ KKMAG MG + TV+NL+ Sbjct: 233 FAGVMKRHGFGGQDRSHGVSLTHRSMGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLK 292 Query: 179 VVSVDDKRGLILVKGCVPGAK 199 V+ VD + G+++V+G V G K Sbjct: 293 VLKVDPENGIVVVQGAVSGPK 313 >gi|326437537|gb|EGD83107.1| hypothetical protein PTSG_03748 [Salpingoeca sp. ATCC 50818] Length = 307 Score = 194 bits (493), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 98/209 (46%), Positives = 142/209 (67%), Gaps = 2/209 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++ARKLGMT + + G R+P+T +++ QVV H+T+D++GY A+++GA + + V Sbjct: 63 RTGILARKLGMTQTFTLWGERVPLTAFQIEDLQVVEHKTVDRDGYSAMRLGAVNLEPRKV 122 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP+ G F + PK+ + EFRV +D +LP+G+ S S+F GQ VDV G+TIGKGF Sbjct: 123 KKPVLGQFRKHKLPPKQHVAEFRV-TEDCILPIGTHISCSHFIPGQYVDVQGVTIGKGFQ 181 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF G+ A+HGV+++HR G G QDPGRV+K K+M GRMGG + L+V Sbjct: 182 GVMKRHNFKGMPASHGVTLTHRKAGGLGGGQDPGRVWKGKRMEGRMGGVKRYQFGLQVYQ 241 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 +D + L+ V G PGA KNS + +RD+ Sbjct: 242 IDTRYNLLYVVGSAPGA-KNSIVKIRDAM 269 >gi|289209329|ref|YP_003461395.1| 50S ribosomal protein L3 [Thioalkalivibrio sp. K90mix] gi|288944960|gb|ADC72659.1| 50S ribosomal protein L3 [Thioalkalivibrio sp. K90mix] Length = 214 Score = 194 bits (493), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 102/213 (47%), Positives = 140/213 (65%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RKLGM+ V+ +G +PVTVL +DN +VV + + +GY AVQV AG K Sbjct: 1 MAIGLIGRKLGMSRVFTDDGVSVPVTVLQVDNNRVVQIKRSEGDGYNAVQVTAGARKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 VSKP G +++ +V P + L+EFRV+ D+ + L G + F GQ+VDVT + GKG Sbjct: 61 VSKPEAGHYAAASVEPGRGLWEFRVEADELEGLAPGDAITVDRFEEGQVVDVTSQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F GA+KRHNF ATHG S++HR+ GS G Q PGRVFK KKMAG MG R T++NL+V Sbjct: 121 FQGAVKRHNFRTQDATHGNSLAHRAPGSIGQNQSPGRVFKGKKMAGHMGAERKTIQNLKV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD R L+L++G VPGA +++R + K+ Sbjct: 181 VRVDADRSLVLIQGAVPGAPSTD-VMIRPAVKA 212 >gi|297834662|ref|XP_002885213.1| hypothetical protein ARALYDRAFT_479224 [Arabidopsis lyrata subsp. lyrata] gi|297331053|gb|EFH61472.1| hypothetical protein ARALYDRAFT_479224 [Arabidopsis lyrata subsp. lyrata] Length = 323 Score = 194 bits (493), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 100/209 (47%), Positives = 144/209 (68%), Gaps = 2/209 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K GMT +++ G R+P+++L +D+ V +T++K G A+Q+G G+ K K++ Sbjct: 75 RTGIIAVKCGMTALWDKWGARVPISILWVDDNIVSQVKTVEKEGIFALQIGCGQKKPKHL 134 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SK + G F + V K+KL EF V +D LLPVG+ +F GQ VDVTG+T GKGF Sbjct: 135 SKAVVGHFRAQGVPLKRKLREFPVT-EDALLPVGTSLGVRHFVPGQYVDVTGITRGKGFQ 193 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F G+ +HG S+SHRS GSTG R PG+VFK KKMAGRMG ++ TVKN+ V Sbjct: 194 GCMKRHGFSGMPGSHGASLSHRSGGSTGQRDAPGKVFKGKKMAGRMGADQRTVKNVWVYK 253 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 +D R L+ V+G VPGA+ N ++ ++D++ Sbjct: 254 IDPARNLMWVRGQVPGAEGN-FVFIKDAW 281 >gi|296827944|ref|XP_002851250.1| 54S ribosomal protein L9 [Arthroderma otae CBS 113480] gi|238838804|gb|EEQ28466.1| 54S ribosomal protein L9 [Arthroderma otae CBS 113480] Length = 303 Score = 194 bits (492), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 105/213 (49%), Positives = 145/213 (68%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GMT +Y+ E G R P TVL LD QV+ H+TL+KNGY AVQVG+G K Sbjct: 76 LRTGALAIKKGMTAIYDPETGVRTPCTVLQLDGAQVISHKTLEKNGYCAVQVGSGFKSEK 135 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV++PM G FS+ VSPK + EFRV+ + LLPVG V + +F GQ VDV + G G Sbjct: 136 NVTRPMLGHFSTNGVSPKLYIHEFRVKDETGLLPVGEVINADWFQEGQYVDVRSNSRGMG 195 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+GAMK+ F G +HGVS++HRS GST Q G RV+ KKM GRMG ++VT+++L+ Sbjct: 196 FAGAMKKWGFHGQDRSHGVSLTHRSLGSTAPSQGGGSRVYPGKKMPGRMGNHQVTLQSLK 255 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V+ VD ++G+++VKG V G K + ++D+ K Sbjct: 256 VLKVDAEKGIVVVKGSVAGPKGRC-VKIQDAIK 287 >gi|225432181|ref|XP_002268657.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297736812|emb|CBI26013.3| unnamed protein product [Vitis vinifera] Length = 307 Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 103/208 (49%), Positives = 140/208 (67%), Gaps = 2/208 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G +A K GM+ +++ G R+P+TVL LD+ V +T +K G A+QVG G+ K K++ Sbjct: 59 RTGAIAVKCGMSALWDKWGARVPITVLWLDDNIVSQVKTFEKEGLNALQVGCGQKKAKHL 118 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F + V K+KL EF V +D LLPVG+ +F GQ VDVTG+T GKGF Sbjct: 119 TKPEVGHFRAQGVPLKRKLREFPVT-EDALLPVGTTIGVRHFVPGQYVDVTGITRGKGFQ 177 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR F G+ A+HG S+SHRS GSTG R PG+VFK KKM GRMGG + TVKN+ V Sbjct: 178 GGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGKQRTVKNVWVYK 237 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209 +D R L+ V+G VPGA+ N ++ ++D+ Sbjct: 238 IDPTRNLMWVRGQVPGAEGN-FVFIKDA 264 >gi|315056921|ref|XP_003177835.1| 54S ribosomal protein L9 [Arthroderma gypseum CBS 118893] gi|311339681|gb|EFQ98883.1| 54S ribosomal protein L9 [Arthroderma gypseum CBS 118893] Length = 304 Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 104/213 (48%), Positives = 145/213 (68%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GMT +Y+ E G R P TVL LD QVV H+T +KNGY AVQVG+G + Sbjct: 77 LRTGALAIKKGMTAIYDPETGVRTPCTVLQLDGAQVVSHKTFEKNGYCAVQVGSGFKYER 136 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV+KPM G FS+ VSPK+ + EFRV+ + LLP+G V + +F GQ VDV + G G Sbjct: 137 NVTKPMLGHFSANGVSPKRHIHEFRVKDEAGLLPIGEVINADWFQEGQYVDVRSNSRGMG 196 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+GAMK+ F G +HGVS++HRS GST Q G RV+ KKM GRMG ++VT+++L+ Sbjct: 197 FAGAMKKWGFHGQDRSHGVSLTHRSLGSTAPSQGGGSRVYPGKKMPGRMGNHQVTLQSLK 256 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V+ VD ++G+++VKG V G K + ++D+ K Sbjct: 257 VLKVDAEKGIVVVKGGVAGPKGRC-VKIQDAIK 288 >gi|302498268|ref|XP_003011132.1| hypothetical protein ARB_02654 [Arthroderma benhamiae CBS 112371] gi|291174680|gb|EFE30492.1| hypothetical protein ARB_02654 [Arthroderma benhamiae CBS 112371] gi|326474709|gb|EGD98718.1| 50S ribosomal protein L3 [Trichophyton tonsurans CBS 112818] gi|326484840|gb|EGE08850.1| 50S ribosomal protein L3 [Trichophyton equinum CBS 127.97] Length = 304 Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 102/213 (47%), Positives = 145/213 (68%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GMT +Y+ E G R P TVL LD QV+ H+T +KNGY AVQVG+G + Sbjct: 77 LRTGALAIKKGMTAIYDPETGVRTPCTVLQLDGAQVISHKTFEKNGYCAVQVGSGLKNER 136 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV++PM G FS+ VSPK+ + EFRV+ + LLP+G V + +F GQ VDV + G G Sbjct: 137 NVTRPMLGHFSANGVSPKRHIHEFRVKDETGLLPIGEVINADWFQEGQYVDVRSNSRGMG 196 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+GAMK+ F G +HGVS++HRS GST Q G RV+ KKM GRMG ++VT+++L+ Sbjct: 197 FAGAMKKWGFHGQDRSHGVSLTHRSLGSTAPSQGGGSRVYPGKKMPGRMGNHQVTLQSLK 256 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V+ VD ++G+++VKG V G K + ++D+ K Sbjct: 257 VLKVDAEKGIVVVKGGVAGPKGRC-VKIQDAIK 288 >gi|302662377|ref|XP_003022845.1| hypothetical protein TRV_03069 [Trichophyton verrucosum HKI 0517] gi|291186810|gb|EFE42227.1| hypothetical protein TRV_03069 [Trichophyton verrucosum HKI 0517] Length = 304 Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 102/213 (47%), Positives = 145/213 (68%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GMT +Y+ E G R P TVL LD QV+ H+T +KNGY AVQVG+G + Sbjct: 77 LRTGALAIKKGMTAIYDPETGVRTPCTVLQLDGAQVISHKTFEKNGYCAVQVGSGLKSER 136 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV++PM G FS+ VSPK+ + EFRV+ + LLP+G V + +F GQ VDV + G G Sbjct: 137 NVTRPMLGHFSANGVSPKRHIHEFRVKDETGLLPIGEVINADWFQEGQYVDVRSNSRGMG 196 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+GAMK+ F G +HGVS++HRS GST Q G RV+ KKM GRMG ++VT+++L+ Sbjct: 197 FAGAMKKWGFHGQDRSHGVSLTHRSLGSTAPSQGGGSRVYPGKKMPGRMGNHQVTLQSLK 256 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V+ VD ++G+++VKG V G K + ++D+ K Sbjct: 257 VLKVDAEKGIVVVKGGVAGPKGRC-VKIQDAIK 288 >gi|224005591|ref|XP_002291756.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220972275|gb|EED90607.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 232 Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 110/213 (51%), Positives = 137/213 (64%), Gaps = 4/213 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVKN 60 R G + KLGM +++ G R P TVL+LDN VV ++ D +GY AVQ+GAGE K KN Sbjct: 20 RCGALGIKLGMMPLWDKWGERHPCTVLYLDNNVVVRTKSKDSVDGYDAVQIGAGERKAKN 79 Query: 61 VSKPMRGFFSS--VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 V+KP+ ++ VN +P + EFRV D + P GS +F GQ VD+ G + GK Sbjct: 80 VNKPLMCHYAKFGVNENPPYVVREFRVTTPDAMPPPGSKIHARHFVPGQNVDIAGTSKGK 139 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G MKRH F G+ ATHG S SHR+ GSTG QDPGRVFK KKM GRMGG RVT +NL Sbjct: 140 GFQGGMKRHGFKGMPATHGTSKSHRAIGSTGQCQDPGRVFKGKKMPGRMGGVRVTKQNLR 199 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VV +D R LI VKG VPG K ++ +RD+ K Sbjct: 200 VVKIDRGRNLIYVKGAVPG-NKGEFVEIRDAVK 231 >gi|327301767|ref|XP_003235576.1| 50S ribosomal protein L3 [Trichophyton rubrum CBS 118892] gi|326462928|gb|EGD88381.1| 50S ribosomal protein L3 [Trichophyton rubrum CBS 118892] Length = 302 Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 102/213 (47%), Positives = 145/213 (68%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GMT +Y+ E G R P TVL LD QV+ H+T +KNGY AVQVG+G + Sbjct: 75 LRTGALAIKKGMTAIYDPETGVRTPCTVLQLDGAQVISHKTFEKNGYCAVQVGSGLKNER 134 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV++PM G FS+ VSPK+ + EFRV+ + LLP+G V + +F GQ VDV + G G Sbjct: 135 NVTRPMLGHFSANGVSPKRHIHEFRVKDETGLLPIGEVINADWFQEGQYVDVRSNSRGMG 194 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+GAMK+ F G +HGVS++HRS GST Q G RV+ KKM GRMG ++VT+++L+ Sbjct: 195 FAGAMKKWGFHGQDRSHGVSLTHRSLGSTAPSQGGGSRVYPGKKMPGRMGNHQVTLQSLK 254 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V+ VD ++G+++VKG V G K + ++D+ K Sbjct: 255 VLKVDAEKGIVVVKGGVAGPKGRC-VKIQDAIK 286 >gi|6321659|ref|NP_011736.1| Mrpl9p [Saccharomyces cerevisiae S288c] gi|1710598|sp|P31334|RM09_YEAST RecName: Full=54S ribosomal protein L9, mitochondrial; AltName: Full=YmL9; Flags: Precursor gi|886912|emb|CAA61168.1| ORF 269 [Saccharomyces cerevisiae] gi|1323396|emb|CAA97248.1| MRPL9 [Saccharomyces cerevisiae] gi|45270438|gb|AAS56600.1| YGR220C [Saccharomyces cerevisiae] gi|151943496|gb|EDN61807.1| YmL9 [Saccharomyces cerevisiae YJM789] gi|190406772|gb|EDV10039.1| 60S ribosomal protein L9, mitochondrial precursor [Saccharomyces cerevisiae RM11-1a] gi|207344963|gb|EDZ71935.1| YGR220Cp-like protein [Saccharomyces cerevisiae AWRI1631] gi|256272642|gb|EEU07619.1| Mrpl9p [Saccharomyces cerevisiae JAY291] gi|259146721|emb|CAY79978.1| Mrpl9p [Saccharomyces cerevisiae EC1118] gi|285812413|tpg|DAA08313.1| TPA: Mrpl9p [Saccharomyces cerevisiae S288c] Length = 269 Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 98/211 (46%), Positives = 139/211 (65%), Gaps = 2/211 (0%) Query: 2 RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R G++ RK GM ++ G R T+L ++N +V++HRT + NGY A QVG G + Sbjct: 58 RCGLITRKKGMMPYFDKSTGERSAATILEVNNVEVIMHRTSEVNGYFACQVGYGSRHLSK 117 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS+ M G F+S V+PK+ + EFRV+ + L+P G++ PS+F GQ VDV ++ GKGF Sbjct: 118 VSRQMLGHFASKVVNPKEHVAEFRVKDEKGLIPPGTLLKPSFFKEGQYVDVRSVSKGKGF 177 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR+ F GLRA+HG SI HR GS G QDPGRV +KM G MG VT++N++V+ Sbjct: 178 TGVMKRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVL 237 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VDD+ +I VKG V G KNS++ ++D+ K Sbjct: 238 KVDDENNVIWVKGSVAGP-KNSFVKIQDAIK 267 >gi|212528688|ref|XP_002144501.1| 50S ribosomal protein L3 [Penicillium marneffei ATCC 18224] gi|210073899|gb|EEA27986.1| 50S ribosomal protein L3 [Penicillium marneffei ATCC 18224] Length = 300 Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 104/213 (48%), Positives = 142/213 (66%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G++A K GMT +Y+ E G+R P TVL LD CQVV H+T+DK+GY AVQVGAG K + Sbjct: 72 LRTGLLAIKKGMTGLYDPETGKRTPCTVLQLDRCQVVSHKTMDKHGYFAVQVGAGFKKPQ 131 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++K + G FS ++PK+ + EFRV+ LL +GS S ++F VGQ VD T GKG Sbjct: 132 RLTKALLGHFSVNEIAPKRYVHEFRVKDQSGLLEIGSTLSANWFQVGQFVDARSNTKGKG 191 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKRH F G +HGVS++HRS GS G Q G RV+ KKMAG MG + T++NL+ Sbjct: 192 FAGVMKRHGFHGQDRSHGVSLTHRSMGSAGPSQGGGSRVYPGKKMAGNMGNVQNTLQNLK 251 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V+ VD G+I+V G V G K + ++D+ K Sbjct: 252 VLEVDPVNGIIVVNGSVSGP-KGCLVQLQDALK 283 >gi|328872429|gb|EGG20796.1| ribosomal protein L3 [Dictyostelium fasciculatum] Length = 333 Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 106/208 (50%), Positives = 138/208 (66%), Gaps = 3/208 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G + +KLGMT VY ++ IPVTV+ L + QVV + +G AVQVGAGE K+KN+ Sbjct: 64 RVGAIGKKLGMTTVY-VDHVAIPVTVIELPDNQVVQVKRKVNDGSNAVQVGAGEIKLKNI 122 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 ++G F+ +V PK+ + EF+V K + VG+ +F GQLV V G + GKGF+ Sbjct: 123 GGTLKGHFAKADVPPKRVVMEFKVTKGG-FMDVGTSIDARHFVPGQLVKVQGTSTGKGFA 181 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR NF GL ATHGVS +HRS GSTGCRQ PGRVFK KKM GR+GG TV NL+VV Sbjct: 182 GGMKRWNFSGLLATHGVSKTHRSIGSTGCRQTPGRVFKGKKMPGRLGGQSSTVNNLQVVK 241 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209 ++ + +I+VKG VPG K ++ V DS Sbjct: 242 INSELNVIMVKGAVPG-KNGGYLRVTDS 268 >gi|145256427|ref|XP_001401384.1| 54S ribosomal protein L9 [Aspergillus niger CBS 513.88] gi|134058285|emb|CAK38476.1| unnamed protein product [Aspergillus niger] Length = 305 Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 97/201 (48%), Positives = 134/201 (66%), Gaps = 2/201 (0%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G + K GMT +Y+ E G+R+P TVL LD +VV H+T K+GY AVQ+GAG + Sbjct: 79 LRTGAITFKKGMTALYDPETGKRVPCTVLQLDRVEVVSHKTRQKHGYYAVQLGAGWRRPD 138 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 N++K + G F++ +SPK+ ++EFRV+ + LLPVG S +F GQ VD T GKG Sbjct: 139 NLTKSLLGHFTANGISPKRHVYEFRVKDESGLLPVGQTVSADWFQEGQFVDARSDTKGKG 198 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKRH FGG +HGVS++HRS GS G Q G RV+ KKMAG MG + TV+NL Sbjct: 199 FAGVMKRHGFGGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLR 258 Query: 179 VVSVDDKRGLILVKGCVPGAK 199 ++ VD + G+++V G V G K Sbjct: 259 ILKVDAENGIVVVNGSVSGPK 279 >gi|302692256|ref|XP_003035807.1| hypothetical protein SCHCODRAFT_74210 [Schizophyllum commune H4-8] gi|300109503|gb|EFJ00905.1| hypothetical protein SCHCODRAFT_74210 [Schizophyllum commune H4-8] Length = 323 Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 105/216 (48%), Positives = 138/216 (63%), Gaps = 5/216 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTL--DKNGYMAVQVGAGEAK 57 +R+GV+ARK GMT ++N G PVTVL L+NCQV + RT+ D Y AVQV A + Sbjct: 56 VRTGVIARKKGMTTIFNEHGVACPVTVLQLENCQVTANIRTVRRDHTVYHAVQVAASDKA 115 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 KN S M G F+ V PK+ + EF V D ++PVG+ S +F GQ VDV +IG Sbjct: 116 AKNTSIQMLGHFNKAGVPPKQVVKEFPVTPDA-VVPVGTTLSACHFVPGQYVDVVANSIG 174 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF G MKR FGGL A+HG SISHRS GSTG DP RV+ +KMAGR+G R T +NL Sbjct: 175 KGFQGGMKRWGFGGLAASHGASISHRSLGSTGQNTDPARVWPGRKMAGRLGNERTTTQNL 234 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V +D++ ++ V+G VPG ++++ VRD+ K A Sbjct: 235 LVERIDNELNIVYVRGAVPGV-DDAFVQVRDAKKKA 269 >gi|190346390|gb|EDK38465.2| hypothetical protein PGUG_02563 [Meyerozyma guilliermondii ATCC 6260] Length = 279 Score = 191 bits (485), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 101/210 (48%), Positives = 137/210 (65%), Gaps = 2/210 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ K GM Y +G + TVL +D+C+V+ ++T + +GY AV VG+G K+KN+ Sbjct: 57 RPGLLGIKRGMITWYTEDGNQFAATVLEVDSCEVMANKTKETDGYTAVMVGSG-TKLKNL 115 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 + VSPK+ + EFRV+ + L+PVG+ YF VGQLVDV+G++ GKGF+ Sbjct: 116 TPDQLRLAQQAGVSPKRSIREFRVRDESGLIPVGTELRADYFAVGQLVDVSGVSKGKGFA 175 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRH F GL+A+HGVS +HRS GSTG QDPGRV KKMAG MG TV N EV+ Sbjct: 176 GVIKRHGFAGLQASHGVSKAHRSAGSTGATQDPGRVLPGKKMAGHMGAVNRTVFNNEVLH 235 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D G+++VKG VPG K S I +RD+ K Sbjct: 236 ADGDAGILVVKGVVPGPNK-SVIKIRDAKK 264 >gi|58267640|ref|XP_570976.1| ribosomal large subunit assembly and maintenance-related protein [Cryptococcus neoformans var. neoformans JEC21] gi|134112043|ref|XP_775557.1| hypothetical protein CNBE2710 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258216|gb|EAL20910.1| hypothetical protein CNBE2710 [Cryptococcus neoformans var. neoformans B-3501A] gi|57227210|gb|AAW43669.1| ribosomal large subunit assembly and maintenance-related protein, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 308 Score = 191 bits (484), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 103/222 (46%), Positives = 139/222 (62%), Gaps = 4/222 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG-YMAVQVGAGEAKVK 59 +R+G++ARK GMT +++ +GRR PVTVL +D QVV H Y +Q+GA + K Sbjct: 43 LRTGLIARKRGMTALWDADGRRWPVTVLQVDANQVVRHSPPPPTSPYHTLQIGASPRREK 102 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +K G F V PK +L EF+V +D ++PVG+ S +F GQ VDV G+TIGKG Sbjct: 103 TTTKQQLGHFKKAGVEPKYRLKEFQVS-EDAVVPVGTELSAGHFVPGQFVDVQGVTIGKG 161 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKRH F GL+A+HG S+ HRS GS G QDPGRV KKM G MG T +NL + Sbjct: 162 FQGVMKRHGFRGLKASHGTSVKHRSPGSIGQNQDPGRVIPGKKMPGHMGNVTRTTQNLLI 221 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 VD L+ V+GCVPG+ +S++ V+DS K V K +++ Sbjct: 222 HRVDHVLNLLYVRGCVPGS-DDSFLYVKDS-KKLVKSKAQLA 261 >gi|3984|emb|CAA46148.1| YmL9 mitochondrial ribosomal protein [Saccharomyces cerevisiae] Length = 269 Score = 191 bits (484), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 97/211 (45%), Positives = 139/211 (65%), Gaps = 2/211 (0%) Query: 2 RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R G++ RK GM ++ G R T+L ++N +V++HRT + NGY A QVG G + Sbjct: 58 RCGLITRKKGMMPYFDKSTGERSAATILEVNNVEVIMHRTSEVNGYFACQVGYGSRHLSK 117 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS+ M G F+S V+PK+ + +FRV+ + L+P G++ PS+F GQ VDV ++ GKGF Sbjct: 118 VSRQMLGHFASKVVNPKEHVAQFRVKDEKGLIPPGTLLKPSFFKEGQYVDVRSVSKGKGF 177 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR+ F GLRA+HG SI HR GS G QDPGRV +KM G MG VT++N++V+ Sbjct: 178 TGVMKRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVL 237 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VDD+ +I VKG V G KNS++ ++D+ K Sbjct: 238 KVDDENNVIWVKGSVAGP-KNSFVKIQDAIK 267 >gi|330819132|ref|XP_003291618.1| hypothetical protein DICPUDRAFT_39301 [Dictyostelium purpureum] gi|325078183|gb|EGC31848.1| hypothetical protein DICPUDRAFT_39301 [Dictyostelium purpureum] Length = 340 Score = 191 bits (484), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 100/208 (48%), Positives = 138/208 (66%), Gaps = 2/208 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G + +K+GM Y I PVTV+ + N QV + K+G VQ+GA E ++KNV Sbjct: 58 RMGAIGKKVGMMTTY-IGAEAYPVTVIQIPNNQVTQVKRKIKDGANMVQIGADEIRMKNV 116 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP+RG F+ NV+PK+ L EF+V + + +G+ +F GQLV V G + GKGF+ Sbjct: 117 PKPLRGHFAKANVTPKRILMEFKVTNNALNIDLGTPILARHFVPGQLVTVKGKSSGKGFA 176 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR NF G ATHGVS++HRS G+TG RQ PGRVFKN+KM GR+GG TVKNL+++ Sbjct: 177 GGMKRWNFRGQPATHGVSLTHRSIGATGNRQTPGRVFKNRKMPGRLGGESCTVKNLQILK 236 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209 ++++ I+VKG VPG KK S++ + DS Sbjct: 237 INNELNCIMVKGAVPG-KKGSYLKIIDS 263 >gi|301104340|ref|XP_002901255.1| 50S ribosomal protein L3-2 [Phytophthora infestans T30-4] gi|262101189|gb|EEY59241.1| 50S ribosomal protein L3-2 [Phytophthora infestans T30-4] Length = 285 Score = 191 bits (484), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 102/196 (52%), Positives = 130/196 (66%), Gaps = 1/196 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K+GM V++ G R TVL ++ CQV +T D++G+ A+Q+G G K KNV Sbjct: 39 RTGLLAVKIGMMPVWDNFGYRHNCTVLQVEECQVTQVKTADRHGFNALQLGVGLRKPKNV 98 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SKP+ G S V K++L EFRV +D LLP+G+ S +F GQ VDV G++ GKGF Sbjct: 99 SKPVLGHLSKAGVPAKRQLQEFRVS-EDALLPLGTTLSALHFNAGQYVDVCGISKGKGFQ 157 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MK HNF G A+HG S + R GSTG QDPG+VFK KKM GRMGGNRVT NL + Sbjct: 158 GVMKLHNFAGQPASHGNSKTQRHMGSTGQCQDPGKVFKGKKMPGRMGGNRVTRDNLWIAK 217 Query: 182 VDDKRGLILVKGCVPG 197 +D R LI VKG VPG Sbjct: 218 IDVDRNLIYVKGSVPG 233 >gi|238021591|ref|ZP_04602017.1| hypothetical protein GCWU000324_01491 [Kingella oralis ATCC 51147] gi|237866205|gb|EEP67247.1| hypothetical protein GCWU000324_01491 [Kingella oralis ATCC 51147] Length = 215 Score = 191 bits (484), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 106/214 (49%), Positives = 138/214 (64%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V+ +G +PVTVL + +V ++ + +GY AVQV GE K + Sbjct: 1 MALGLVGRKVGMTRVFTEQGASVPVTVLEMTANRVTQVKSKETDGYAAVQVTFGEKKANH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF V ++ L G V + S F VGQLVDVTG + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLHEFVVSEEKAAELKAGDVITVSLFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV++LE+ Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKSTVQHLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V VD++R L+LVKG VPGA NS ++VR S K A Sbjct: 181 VRVDEERNLLLVKGAVPGA-VNSNVVVRHSVKKA 213 >gi|56707478|ref|YP_169374.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis SCHU S4] gi|110669949|ref|YP_666506.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis FSC198] gi|254370829|ref|ZP_04986834.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|81820815|sp|Q5NHW8|RL3_FRATT RecName: Full=50S ribosomal protein L3 gi|122971067|sp|Q14JC0|RL3_FRAT1 RecName: Full=50S ribosomal protein L3 gi|54112825|gb|AAV29046.1| NT02FT0098 [synthetic construct] gi|56603970|emb|CAG44958.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis SCHU S4] gi|110320282|emb|CAL08341.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis FSC198] gi|151569072|gb|EDN34726.1| hypothetical protein FTBG_00644 [Francisella tularensis subsp. tularensis FSC033] gi|282158622|gb|ADA78013.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis NE061598] Length = 211 Score = 191 bits (484), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 99/198 (50%), Positives = 133/198 (67%), Gaps = 1/198 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ +G IPVTV+ ++ +V +T++K+GY A+QV G K N Sbjct: 1 MSLGLVGRKCGMTRIFTEDGVSIPVTVVQVEPNKVTQVKTVEKDGYNAIQVTTGFKKRSN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM G ++ +V P + L+EF V + VGS F + F GQ VDV G++ GKGF Sbjct: 61 VNKPMAGHYAKASVEPGRGLWEFTVDAAAEY-QVGSSFDATMFEAGQKVDVRGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRHNF ATHG S+SHR HGSTG Q PGRVFKNKKMAG +G VT+++LEVV Sbjct: 120 QGGVKRHNFATQDATHGNSLSHRVHGSTGQNQTPGRVFKNKKMAGHLGNENVTIQSLEVV 179 Query: 181 SVDDKRGLILVKGCVPGA 198 VD + GL+L+KG +PG+ Sbjct: 180 RVDAENGLLLLKGGIPGS 197 >gi|323456985|gb|EGB12851.1| hypothetical protein AURANDRAFT_19295 [Aureococcus anophagefferens] Length = 249 Score = 190 bits (483), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 107/218 (49%), Positives = 138/218 (63%), Gaps = 10/218 (4%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G +A K+GM ++ G+R +TVLH+D C+VV + +GY A+Q+GAG K K+ Sbjct: 2 RTGALAVKVGMLGTWDASGQRHALTVLHVDGCRVVQVKDAATDGYTALQLGAGALKPKHA 61 Query: 62 SKPMRGFF-----SSVNVSP---KKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113 G +V +P + L EFRV D +LP G+ ++F GQLVDV G Sbjct: 62 PSAHAGHCGAHGGEAVAGTPYELARTLAEFRVSADA-VLPPGTRVPAAHFAPGQLVDVRG 120 Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 T GKGF GAMKR NFGG RATHGVS +HR+HGS G Q+PGRVFK KKMAGRMGG T Sbjct: 121 ATRGKGFQGAMKRWNFGGQRATHGVSKTHRAHGSMGGCQNPGRVFKGKKMAGRMGGRNRT 180 Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +NL V +D R L+ V+GCVPGA K +W+ V D+ K Sbjct: 181 AQNLTVHKIDTVRDLLFVRGCVPGA-KGTWVRVTDAVK 217 >gi|89255670|ref|YP_513031.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica LVS] gi|115314171|ref|YP_762894.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica OSU18] gi|118496852|ref|YP_897902.1| 50S ribosomal protein L3 [Francisella tularensis subsp. novicida U112] gi|134302585|ref|YP_001122556.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis WY96-3418] gi|156501620|ref|YP_001427685.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009889|ref|ZP_02274820.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica FSC200] gi|187932143|ref|YP_001892128.1| 50S ribosomal protein L3 [Francisella tularensis subsp. mediasiatica FSC147] gi|290953211|ref|ZP_06557832.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica URFT1] gi|295313579|ref|ZP_06804168.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica URFT1] gi|109893430|sp|Q2A5H0|RL3_FRATH RecName: Full=50S ribosomal protein L3 gi|122325787|sp|Q0BNS7|RL3_FRATO RecName: Full=50S ribosomal protein L3 gi|166233143|sp|A7N9S6|RL3_FRATF RecName: Full=50S ribosomal protein L3 gi|166233144|sp|A0Q4I3|RL3_FRATN RecName: Full=50S ribosomal protein L3 gi|166233145|sp|A4IZT4|RL3_FRATW RecName: Full=50S ribosomal protein L3 gi|226725179|sp|B2SDY5|RL3_FRATM RecName: Full=50S ribosomal protein L3 gi|89143501|emb|CAJ78677.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica LVS] gi|115129070|gb|ABI82257.1| ribosomal protein L3 [Francisella tularensis subsp. holarctica OSU18] gi|118422758|gb|ABK89148.1| 50S ribosomal protein L3 [Francisella novicida U112] gi|134050362|gb|ABO47433.1| ribosomal protein L3 [Francisella tularensis subsp. tularensis WY96-3418] gi|156252223|gb|ABU60729.1| ribosomal protein L3 [Francisella tularensis subsp. holarctica FTNF002-00] gi|187713052|gb|ACD31349.1| 50S ribosomal protein L3 [Francisella tularensis subsp. mediasiatica FSC147] gi|328676321|gb|AEB27191.1| LSU ribosomal protein L3p (L3e) [Francisella cf. novicida Fx1] Length = 210 Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 99/198 (50%), Positives = 133/198 (67%), Gaps = 1/198 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ +G IPVTV+ ++ +V +T++K+GY A+QV G K N Sbjct: 1 MSLGLVGRKCGMTRIFTEDGVSIPVTVVQVEPNKVTQVKTVEKDGYNAIQVTTGFKKRSN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM G ++ +V P + L+EF V + VGS F + F GQ VDV G++ GKGF Sbjct: 61 VNKPMAGHYAKASVEPGRGLWEFTVDAAAEY-QVGSSFDATMFEAGQKVDVRGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRHNF ATHG S+SHR HGSTG Q PGRVFKNKKMAG +G VT+++LEVV Sbjct: 120 QGGVKRHNFATQDATHGNSLSHRVHGSTGQNQTPGRVFKNKKMAGHLGNENVTIQSLEVV 179 Query: 181 SVDDKRGLILVKGCVPGA 198 VD + GL+L+KG +PG+ Sbjct: 180 RVDAENGLLLLKGGIPGS 197 >gi|300114736|ref|YP_003761311.1| 50S ribosomal protein L3 [Nitrosococcus watsonii C-113] gi|299540673|gb|ADJ28990.1| 50S ribosomal protein L3 [Nitrosococcus watsonii C-113] Length = 213 Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 102/214 (47%), Positives = 145/214 (67%), Gaps = 4/214 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ EG IPVTV+ ++ +TL+++GY A QV GE + Sbjct: 1 MAIGLIGRKIGMTRVFTDEGASIPVTVIEATPNRISQVKTLERDGYQAAQVTVGERRPAR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFR--VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 V+KP++G F+ V P +KL EFR +QK+ ++ VG S F VGQ VDV G+T G+ Sbjct: 61 VTKPLKGHFAKAKVEPGRKLREFRFEIQKEKNI-EVGDELKVSLFEVGQRVDVIGVTRGR 119 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF+G ++R++FGG A+HG S+SHR+ GS G Q PGRVFK KKMAG+MG R TV+NLE Sbjct: 120 GFAGVVRRYHFGGGDASHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGQMGNVRRTVQNLE 179 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +V VD++R L+L+KG +PGA ++V+ + KS Sbjct: 180 LVRVDEERQLLLIKGAIPGAPGGD-VIVKPAVKS 212 >gi|219113447|ref|XP_002186307.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|209583157|gb|ACI65777.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 229 Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 104/214 (48%), Positives = 143/214 (66%), Gaps = 5/214 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G + K+GM +++ G R P T+L LDN V+ ++++++GY AVQ+ AG+ K KNV Sbjct: 16 RCGALGIKVGMMPLFDDWGVRHPCTILFLDNNVVLGQKSIEQHGYWAVQIAAGQRKRKNV 75 Query: 62 SKPMRGFFSSV----NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 + G + + N +P + EFRV L+PVG+ +F GQ VDV+G++ G Sbjct: 76 GVSVLGQYKHILEDENENPPYLVREFRVSDGAHLVPVGARIHARHFVPGQNVDVSGISKG 135 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF GAMKRHNFGG+ A+HGVS SHR+ GSTG QDPG+VFK KKMAGRMG RVTV+NL Sbjct: 136 KGFQGAMKRHNFGGMPASHGVSKSHRALGSTGQCQDPGKVFKGKKMAGRMGTERVTVQNL 195 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VV VD R L+ ++G VPG K +++ +RD+ K Sbjct: 196 RVVKVDRGRNLLFLEGAVPG-NKGAFVEIRDAVK 228 >gi|254456207|ref|ZP_05069636.1| ribosomal protein L3 [Candidatus Pelagibacter sp. HTCC7211] gi|207083209|gb|EDZ60635.1| ribosomal protein L3 [Candidatus Pelagibacter sp. HTCC7211] Length = 236 Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 100/209 (47%), Positives = 138/209 (66%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 ++ +K+GMT + G+ +PVTVL ++ +VV +K GY AVQ+G G+ K ++K Sbjct: 5 ALMGKKIGMTREFYKTGQLVPVTVLKVEKARVVQVIDEEKRGYKAVQLGYGKIKNSKLTK 64 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 M+GFF+ N K+KL E+R+ KD + G+ F F + VD TIGKGF+GA Sbjct: 65 AMKGFFAKKNTEAKRKLKEYRI-KDTEAYKEGNEFGLEIFKDIKFVDTRSKTIGKGFAGA 123 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR NFGGLRA+HGVSISHR+HGSTG QDPG+VFK KKMAG MG T+ N+E+V D Sbjct: 124 MKRWNFGGLRASHGVSISHRAHGSTGHSQDPGKVFKGKKMAGHMGDRLRTMLNIEIVKTD 183 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + L+ +KG +PG+ KN+ + VR S K+ Sbjct: 184 LENELLYLKGSIPGS-KNTEVFVRKSVKN 211 >gi|269792794|ref|YP_003317698.1| 50S ribosomal protein L3 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100429|gb|ACZ19416.1| ribosomal protein L3 [Thermanaerovibrio acidaminovorans DSM 6589] Length = 209 Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 101/209 (48%), Positives = 137/209 (65%), Gaps = 2/209 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V++ EGR +PVTV+ CQVV RT +KNGY AVQ+G G K + Sbjct: 1 MSMGILGRKVGMTQVFDAEGRAVPVTVVEAGPCQVVEVRTPEKNGYSAVQLGFGSVKPGS 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++PM+G+F+ V PK+ L EFRV + G F+ G+ VDV G++ GKG+ Sbjct: 61 VNRPMKGYFAKNGVEPKRWLREFRVDEGHGYEK-GQYVKVDLFSEGETVDVVGVSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR FGG A+HG S HR GS+G PG +FK K M GRMGG RVTVKNL+V Sbjct: 120 AGVMKRFGFGGGPASHGSSKFHRQPGSSGANSYPGHIFKGKTMPGRMGGERVTVKNLKVF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +VD + LIL++G +PGA K+ +L+R + Sbjct: 180 AVDVENNLILLRGAIPGA-KDGLVLIRKA 207 >gi|146417733|ref|XP_001484834.1| hypothetical protein PGUG_02563 [Meyerozyma guilliermondii ATCC 6260] Length = 279 Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 101/210 (48%), Positives = 136/210 (64%), Gaps = 2/210 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ K GM Y +G + TVL +D+C+V+ ++T + +GY AV VG G K+KN+ Sbjct: 57 RPGLLGIKRGMITWYTEDGNQFAATVLEVDSCEVMANKTKETDGYTAVMVGLG-TKLKNL 115 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 + VSPK+ + EFRV+ + L+PVG+ YF VGQLVDV+G++ GKGF+ Sbjct: 116 TPDQLRLAQQAGVSPKRSIREFRVRDESGLIPVGTELRADYFAVGQLVDVSGVSKGKGFA 175 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRH F GL+A+HGVS +HRS GSTG QDPGRV KKMAG MG TV N EV+ Sbjct: 176 GVIKRHGFAGLQASHGVSKAHRSAGSTGATQDPGRVLPGKKMAGHMGAVNRTVFNNEVLH 235 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D G+++VKG VPG K S I +RD+ K Sbjct: 236 ADGDAGILVVKGVVPGPNK-SVIKIRDAKK 264 >gi|121706456|ref|XP_001271490.1| 50S ribosomal protein L3 [Aspergillus clavatus NRRL 1] gi|119399638|gb|EAW10064.1| 50S ribosomal protein L3 [Aspergillus clavatus NRRL 1] Length = 297 Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 98/201 (48%), Positives = 135/201 (67%), Gaps = 2/201 (0%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GMT VY+ E G+RI TVL LD QVV H+T ++GY AVQ+GAG Sbjct: 72 LRTGAIAIKKGMTAVYDTETGKRIACTVLQLDRVQVVSHKTRQRHGYYAVQLGAGWKHPS 131 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV+K + G FS+ VSPK+ ++EFR++ + L+PVG + + S+F GQ VD + GKG Sbjct: 132 NVTKSLLGHFSTHGVSPKRHIYEFRIKDESGLVPVGEMINASWFQEGQYVDARSNSKGKG 191 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKRH F G +HGVS++HRS GS G Q G RV+ KKMAG MG + TV+NL+ Sbjct: 192 FAGVMKRHGFHGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLK 251 Query: 179 VVSVDDKRGLILVKGCVPGAK 199 ++ VD + G+++V G V G K Sbjct: 252 ILKVDPENGIVVVNGSVSGPK 272 >gi|321259123|ref|XP_003194282.1| ribosomal large subunit assembly and maintenance-related protein [Cryptococcus gattii WM276] gi|317460753|gb|ADV22495.1| Ribosomal large subunit assembly and maintenance-related protein, putative [Cryptococcus gattii WM276] Length = 308 Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 103/222 (46%), Positives = 138/222 (62%), Gaps = 4/222 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG-YMAVQVGAGEAKVK 59 +R+G++ARK GMT +++ +GRR PVTVL +D QVV H Y +Q+GA + K Sbjct: 43 LRTGLIARKRGMTALWDADGRRWPVTVLQVDANQVVRHSPPPPTSPYHTLQIGASPRREK 102 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +K G F V PK +L EF+V D ++PVG+ S +F GQ VDV G+TIGKG Sbjct: 103 TTTKQQLGHFRKAGVEPKYRLKEFQVS-GDAVVPVGTELSAGHFVPGQFVDVQGVTIGKG 161 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKRH F GL+A+HG S+ HRS GS G QDPGRV KKM G MG T +NL + Sbjct: 162 FQGVMKRHGFRGLKASHGTSVKHRSGGSIGQNQDPGRVIPGKKMPGHMGNATRTTQNLLI 221 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 VD L+ V+GCVPG+ +S++ V+DS K V K +++ Sbjct: 222 HRVDHILNLLYVRGCVPGS-DDSFLYVKDS-KKLVKSKAQLA 261 >gi|294654997|ref|XP_002770064.1| DEHA2B02684p [Debaryomyces hansenii CBS767] gi|199429613|emb|CAG85072.4| DEHA2B02684p [Debaryomyces hansenii] Length = 278 Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 97/210 (46%), Positives = 138/210 (65%), Gaps = 2/210 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ K GM Y +G++ TV+ +DNC+V+ ++T+D +GY +V +G + K+KN+ Sbjct: 61 RPGLLGVKRGMITWYTDDGKQFGATVIEIDNCEVIENKTVDTHGYTSVLLGQCD-KLKNI 119 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 + F VSPKK + EFR++ + L+PVG+ + YF VGQLVDV +T GKGF+ Sbjct: 120 TDKNLRKFQEAGVSPKKHIGEFRIRDESGLIPVGTELTADYFAVGQLVDVKAITKGKGFA 179 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F GL+A+HGVS +HRS GS G Q PGRV KKMAGRMGG TV N EV+ Sbjct: 180 GVMKRHGFKGLKASHGVSKAHRSAGSMGATQTPGRVLPGKKMAGRMGGKSCTVFNNEVLH 239 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D + G I++KG +PG + S++ + D+ K Sbjct: 240 ADAEAGFIVLKGQIPGPNR-SFVRISDAQK 268 >gi|88658345|ref|YP_507227.1| 50S ribosomal protein L3 [Ehrlichia chaffeensis str. Arkansas] gi|88599802|gb|ABD45271.1| ribosomal protein L3 [Ehrlichia chaffeensis str. Arkansas] Length = 231 Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 101/214 (47%), Positives = 149/214 (69%), Gaps = 5/214 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+ K+G T +++ EG+RIP+T+LHL + ++ +T D +GY AV +G EA + N+ Sbjct: 4 RIGLFLEKVGHTAIFDNEGKRIPITLLHLRDSFIISKKTKDIHGYDAVVLGV-EASI-NL 61 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP ++ K K+FE RV D++ G+ S ++F Q VD+TG ++GKGF+ Sbjct: 62 KKPQSKILEKSKITAKCKIFESRVDNLGDVVE-GAKVSITHFVKDQYVDITGYSLGKGFA 120 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF GL+A+HGVSI+HRS GSTG QDPGRV+K KKMAG++G ++VTV+NL+V+ Sbjct: 121 GVMKRHNFKGLKASHGVSIAHRSQGSTGQCQDPGRVYKGKKMAGQLGNSKVTVQNLKVIL 180 Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAV 214 VD +R L+ V+G +PGA K S++ V+D+ K +V Sbjct: 181 VDQERSLLGVRGNNIPGA-KGSYVFVKDAVKKSV 213 >gi|66805433|ref|XP_636449.1| ribosomal protein L3, mitochondrial [Dictyostelium discoideum AX4] gi|60464827|gb|EAL62946.1| ribosomal protein L3, mitochondrial [Dictyostelium discoideum AX4] Length = 351 Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 101/208 (48%), Positives = 135/208 (64%), Gaps = 2/208 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G + +K+GM Y I PVTV+ L N QV + +G +QVGA E K+KNV Sbjct: 66 RVGAIGKKVGMLTTY-IGDIAYPVTVIQLPNNQVTQIKRKVNDGVDMIQVGADEIKLKNV 124 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SK ++G F+ NV PK+ L EFRV ++ L +G+ P +F GQL+ V G GKGF+ Sbjct: 125 SKTLQGHFAKANVPPKRVLMEFRVTRNAMNLELGTPILPKHFLPGQLITVKGTNTGKGFA 184 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR +F G ATHGVS++HR+ GSTGCRQ PGRVFK +KM GR+GG TVKNL+V+ Sbjct: 185 GGMKRWHFSGQPATHGVSLTHRAIGSTGCRQTPGRVFKGRKMPGRLGGKSCTVKNLQVLK 244 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209 ++ + +LVKG VPG KK ++ + DS Sbjct: 245 INTEMNCLLVKGAVPG-KKGGYLKITDS 271 >gi|145525954|ref|XP_001448788.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124416354|emb|CAK81391.1| unnamed protein product [Paramecium tetraurelia] Length = 409 Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 97/211 (45%), Positives = 138/211 (65%), Gaps = 4/211 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K+GMT ++ G R +TVL LDN QVV + + + Y +QVGAG +K + Sbjct: 150 RAGLIAVKVGMTAQWDKWGYRHALTVLQLDNNQVV--QVVKNDTYTGLQVGAGAVNIKTL 207 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP G F N+ PKK + EF + +++LPVG + + +FT GQ +D+ G++ GKGF Sbjct: 208 KKPQIGHFLKANIPPKKYIKEFPI-TPENVLPVGFMLTARHFTPGQYIDIQGISTGKGFG 266 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNF ATHG S+ HR GSTG RQDPGRVFK KKM G +G ++VT + +++ Sbjct: 267 GTVKRHNFKTQPATHGNSLCHRQLGSTGQRQDPGRVFKGKKMPGHLGNDKVTCEAIQIYR 326 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D R LI +KG VPG K S + +RDS+K+ Sbjct: 327 IDAVRQLIYIKGSVPG-KPGSIVYLRDSWKA 356 >gi|238492064|ref|XP_002377269.1| 50S ribosomal protein L3 [Aspergillus flavus NRRL3357] gi|220697682|gb|EED54023.1| 50S ribosomal protein L3 [Aspergillus flavus NRRL3357] Length = 296 Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 97/200 (48%), Positives = 133/200 (66%), Gaps = 2/200 (1%) Query: 2 RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R+G +A K GMT +Y+ E G+RI TVL LD +V+ H+T ++GY AVQVG+G N Sbjct: 72 RTGAIAIKKGMTALYDTETGKRIACTVLQLDRVEVISHKTRQQHGYFAVQVGSGWKHPNN 131 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++K + G FS +SPK+ +FEFRV+ ++ LLPVG + +F GQ VD T GKGF Sbjct: 132 LTKSLLGHFSVNGISPKRHIFEFRVRDENGLLPVGQAINADWFQEGQYVDARSNTKGKGF 191 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179 +G MKRH FGG +HGVS++HRS GS G Q G RV+ KKMAG MG + TV+NL++ Sbjct: 192 AGVMKRHGFGGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLKI 251 Query: 180 VSVDDKRGLILVKGCVPGAK 199 + VD + G+++V G V G K Sbjct: 252 LKVDSQNGIVVVNGAVSGPK 271 >gi|119501322|ref|XP_001267418.1| 50S ribosomal protein L3 [Neosartorya fischeri NRRL 181] gi|119415583|gb|EAW25521.1| 50S ribosomal protein L3 [Neosartorya fischeri NRRL 181] Length = 297 Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 101/201 (50%), Positives = 132/201 (65%), Gaps = 2/201 (0%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GMT VY+ E G+RI TVL LD QVV H+T +GY AVQVGAG Sbjct: 72 LRTGAIAIKKGMTAVYDAETGKRIACTVLQLDRVQVVSHKTRQTHGYNAVQVGAGWKHPS 131 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV+K + G FS+ VSPK+ ++EFRV+ + LLPVG + +F GQ VD + GKG Sbjct: 132 NVTKSLLGHFSTNGVSPKRHIYEFRVKDESGLLPVGQTINADWFQEGQYVDARSNSKGKG 191 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKRH F G +HGVS++HRS GS G Q G RV+ KKMAG MG + TV+NL+ Sbjct: 192 FAGVMKRHGFHGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLK 251 Query: 179 VVSVDDKRGLILVKGCVPGAK 199 V+ VD + G+++V G V G K Sbjct: 252 VLKVDAENGIVVVNGSVSGPK 272 >gi|258568440|ref|XP_002584964.1| 60S ribosomal protein L9 [Uncinocarpus reesii 1704] gi|237906410|gb|EEP80811.1| 60S ribosomal protein L9 [Uncinocarpus reesii 1704] Length = 301 Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 99/216 (45%), Positives = 142/216 (65%), Gaps = 3/216 (1%) Query: 2 RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R+G +A K GM+ +++ E G+R P T+L LD QV+ H+T +K+GY AVQVG G N Sbjct: 73 RTGAIAIKKGMSAIFDPETGKRTPCTILQLDRVQVISHKTREKHGYFAVQVGFGWKNPSN 132 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++PM G F++ VSPK+ + EFRV+ + LLP+G + + +F GQ VDV + G GF Sbjct: 133 VTRPMLGHFAANEVSPKRYVHEFRVRDEVGLLPIGQMINADWFQEGQFVDVRSHSRGMGF 192 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179 +G MKR FGG +HGVS++HRS GSTG Q G RV+ KKM G MG +VT +NL+V Sbjct: 193 TGVMKRWGFGGQDRSHGVSLTHRSLGSTGPSQGGGSRVYPGKKMPGNMGNEQVTTQNLKV 252 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 + VD ++GL++VKG V G K + ++D+ K + Sbjct: 253 LKVDPEKGLVVVKGSVSGPKGRC-VKIQDAIKKPLQ 287 >gi|169774031|ref|XP_001821484.1| 54S ribosomal protein L9 [Aspergillus oryzae RIB40] gi|83769345|dbj|BAE59482.1| unnamed protein product [Aspergillus oryzae] Length = 296 Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 97/200 (48%), Positives = 133/200 (66%), Gaps = 2/200 (1%) Query: 2 RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R+G +A K GMT +Y+ E G+RI TVL LD +V+ H+T ++GY AVQVG+G N Sbjct: 72 RTGAIAIKKGMTALYDTETGKRIACTVLQLDRVEVISHKTRQQHGYFAVQVGSGWKHPNN 131 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++K + G FS +SPK+ +FEFRV+ ++ LLPVG + +F GQ VD T GKGF Sbjct: 132 LTKSLLGHFSVNGISPKRHIFEFRVRDENGLLPVGQAINADWFQEGQYVDARSNTKGKGF 191 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179 +G MKRH FGG +HGVS++HRS GS G Q G RV+ KKMAG MG + TV+NL++ Sbjct: 192 AGVMKRHGFGGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLKI 251 Query: 180 VSVDDKRGLILVKGCVPGAK 199 + VD + G+++V G V G K Sbjct: 252 LKVDSQNGIVVVNGAVSGPK 271 >gi|167626806|ref|YP_001677306.1| 50S ribosomal protein L3 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241667387|ref|ZP_04754965.1| 50S ribosomal protein L3 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254875936|ref|ZP_05248646.1| 50S ribosomal protein L3 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|189042845|sp|B0U0Y9|RL3_FRAP2 RecName: Full=50S ribosomal protein L3 gi|167596807|gb|ABZ86805.1| 50S ribosomal protein L3 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254841957|gb|EET20371.1| 50S ribosomal protein L3 [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 210 Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 96/198 (48%), Positives = 131/198 (66%), Gaps = 1/198 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ +G IPVTV+ +++ +V +T + +GY A+QV G K N Sbjct: 1 MSLGLVGRKCGMTRIFTEDGVSIPVTVVQVESNKVTQIKTTETDGYNAIQVTTGFKKRSN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM G ++ +V P + L+EF + D VG+ + F GQ VDV G++ GKGF Sbjct: 61 VNKPMAGHYAKASVEPGRGLWEFAIDNASDY-EVGASIDATIFEAGQKVDVRGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRHNF ATHG S+SHR HGSTG Q PGRVFKNKKMAG +G VT+++LEVV Sbjct: 120 QGGVKRHNFATQDATHGNSLSHRVHGSTGQNQTPGRVFKNKKMAGHLGSENVTIQSLEVV 179 Query: 181 SVDDKRGLILVKGCVPGA 198 VD + GL+L+KG +PG+ Sbjct: 180 RVDAENGLLLLKGGIPGS 197 >gi|312880372|ref|ZP_07740172.1| LSU ribosomal protein L3P [Aminomonas paucivorans DSM 12260] gi|310783663|gb|EFQ24061.1| LSU ribosomal protein L3P [Aminomonas paucivorans DSM 12260] Length = 209 Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 99/209 (47%), Positives = 138/209 (66%), Gaps = 2/209 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V++ EG+ +PVTV+ C VV RT DKN Y AVQ+G G+ K + Sbjct: 1 MSMGILGRKVGMTQVFDAEGKAVPVTVIEAGPCPVVEVRTPDKNQYSAVQLGFGDVKPQR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+RG+++ +V+PK+ L EFRV++ G F G+ VDV G++ GKGF Sbjct: 61 LNKPVRGYYAKQDVAPKRWLREFRVEEGHGF-DKGQEVRADLFAEGETVDVIGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR +FGG A+HG S HR GS+G PG +FK K M GRMGG RVTVKNL V Sbjct: 120 AGVIKRFHFGGGPASHGASKFHRQPGSSGASSYPGHIFKGKTMPGRMGGERVTVKNLRVF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +VD + LIL++G VPGA K+ +L+R + Sbjct: 180 AVDVENNLILLRGAVPGA-KDGLVLIRKT 207 >gi|295660136|ref|XP_002790625.1| 54S ribosomal protein L9 [Paracoccidioides brasiliensis Pb01] gi|226281500|gb|EEH37066.1| 54S ribosomal protein L9 [Paracoccidioides brasiliensis Pb01] Length = 297 Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 96/201 (47%), Positives = 134/201 (66%), Gaps = 2/201 (0%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+GV+A K GMT +++ E G+R P T+L LD QV+ H+TL K+GY AVQVG G + Sbjct: 74 LRTGVLAVKKGMTAIFDQETGKRTPCTILQLDQVQVISHKTLKKHGYFAVQVGCGWKHER 133 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V++PM G F++ V+PK+ + EFRV+ + LLP+G V + +F GQ VD + G G Sbjct: 134 AVTRPMLGHFAANGVAPKRHIHEFRVKDESGLLPIGEVINADWFQEGQFVDARSNSRGMG 193 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F G MKRH F G +HGVS++HRS GS G Q G RV KKMAG MG +VT++NL+ Sbjct: 194 FEGVMKRHGFHGQDRSHGVSLAHRSLGSAGPSQGGGSRVHPGKKMAGNMGNEQVTLQNLK 253 Query: 179 VVSVDDKRGLILVKGCVPGAK 199 V+ VD ++G+++V G V G K Sbjct: 254 VLKVDAEKGIVVVNGSVSGPK 274 >gi|149192608|ref|ZP_01870762.1| 50S ribosomal protein L3 [Vibrio shilonii AK1] gi|148833557|gb|EDL50640.1| 50S ribosomal protein L3 [Vibrio shilonii AK1] Length = 209 Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 101/209 (48%), Positives = 136/209 (65%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT ++ EG IPVTV+ ++ +V RTLD +GY A+QV AGE K VSK Sbjct: 3 GLVGRKVGMTRIFTEEGVSIPVTVVEVEANRVTQVRTLDTDGYAAIQVTAGEKKASRVSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF GA Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELNVELFNDVKKVDVTGTSKGKGFQGA 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 VKRWNFATQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPGA + ++V+ + K+ Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAIKA 209 >gi|171689544|ref|XP_001909712.1| hypothetical protein [Podospora anserina S mat+] gi|170944734|emb|CAP70845.1| unnamed protein product [Podospora anserina S mat+] Length = 382 Score = 187 bits (476), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 96/200 (48%), Positives = 130/200 (65%), Gaps = 1/200 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+GV+A K GMT + G RIP TVL LD Q V+++T +GY AVQVG GE KN Sbjct: 83 VRAGVLAIKKGMTAFMGLTGTRIPCTVLQLDRVQTVLNKTRKDHGYWAVQVGFGERDPKN 142 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + PM G++ + ++PK++L EF+V+ + LLPVG P +F +GQ VDV + G GF Sbjct: 143 IGAPMLGYYEAKGIAPKEQLAEFKVRDEKGLLPVGVQLMPDWFYIGQRVDVRSNSRGMGF 202 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179 +G MKRH F G A+HG S +HR+ GS G Q G RV KKM GRMG RVTV+NL + Sbjct: 203 AGGMKRHGFSGQEASHGNSKNHRTIGSAGPSQGSGSRVLPGKKMPGRMGNQRVTVQNLPI 262 Query: 180 VSVDDKRGLILVKGCVPGAK 199 + +D+ G+++VKG V G K Sbjct: 263 LLIDNDLGIVVVKGAVAGPK 282 >gi|302415769|ref|XP_003005716.1| 54S ribosomal protein L9 [Verticillium albo-atrum VaMs.102] gi|261355132|gb|EEY17560.1| 54S ribosomal protein L9 [Verticillium albo-atrum VaMs.102] Length = 337 Score = 187 bits (476), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 96/200 (48%), Positives = 134/200 (67%), Gaps = 2/200 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+GV+A K GMT V+ + +R+P TVL LD QV+ RT +GY AVQVG G+ + +N Sbjct: 80 LRTGVLAIKKGMTSVF-VGKKRVPATVLQLDQVQVLASRTRATHGYWAVQVGLGQKEPRN 138 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++P+ G+F + V PK+ + EFRV+ +D LLPVG+ P +F GQ VDV + G+GF Sbjct: 139 VTRPLLGYFEARGVFPKRHIAEFRVKGEDGLLPVGAQLRPDWFQKGQYVDVRSNSRGQGF 198 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179 +G MKRH F G A+HG S +HR+ G+ G Q G RV KKM GRMG + TV+NL V Sbjct: 199 AGGMKRHGFAGQPASHGNSKNHRTMGTAGPSQGSGSRVLPGKKMPGRMGNQQTTVQNLTV 258 Query: 180 VSVDDKRGLILVKGCVPGAK 199 +SVD++ G+++V G V G K Sbjct: 259 LSVDNELGIVVVSGPVAGPK 278 >gi|320585734|gb|EFW98413.1| 50S ribosomal protein l3 [Grosmannia clavigera kw1407] Length = 376 Score = 187 bits (476), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 98/212 (46%), Positives = 136/212 (64%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+GV+A K GMT Y+ G RIP TVL L++ QVV +T +GY AVQVG+G + Sbjct: 93 VRTGVLATKRGMTAFYSKSGTRIPCTVLQLEDVQVVATKTRAGHGYWAVQVGSGTRRAAT 152 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ P+ G++ + V+PK L EFRV+ LL G P +F VGQ VD ++ G GF Sbjct: 153 VAAPLLGYYEAKGVAPKAHLAEFRVRDASGLLTPGVALQPDWFHVGQWVDTRSLSRGFGF 212 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179 +GAMK+H F G THG S++HR+ G+TG Q G RV KKM GRMG RVTV+NL V Sbjct: 213 AGAMKKHGFKGQNKTHGNSLNHRTMGTTGPSQGSGSRVMPGKKMPGRMGCERVTVQNLNV 272 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 + VD++ G+++VKG V G K + + ++D+ K Sbjct: 273 LQVDNELGIVVVKGAV-GGPKGALVRLQDAVK 303 >gi|145517081|ref|XP_001444429.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124411840|emb|CAK77032.1| unnamed protein product [Paramecium tetraurelia] Length = 409 Score = 187 bits (476), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 96/211 (45%), Positives = 137/211 (64%), Gaps = 4/211 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K+GMT ++ G R +TVL LDN QVV + + + Y +Q+GAG +K + Sbjct: 150 RAGLIAVKVGMTAQWDKWGYRHALTVLQLDNNQVV--QVVKNDTYTGLQIGAGRVNIKTL 207 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP G F N+ PKK + EF + ++ LPVG + + +FT GQ +D+ G++ GKGF Sbjct: 208 KKPQIGHFLKANIPPKKYIKEFPIT-PENTLPVGFMLTARHFTPGQYIDIQGISTGKGFG 266 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNF ATHG S+ HR GSTG RQDPGRVFK KKM G +G ++VT + +++ Sbjct: 267 GTVKRHNFKTQPATHGNSLCHRQLGSTGQRQDPGRVFKGKKMPGHLGNDKVTCEGIQIYR 326 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D R LI +KG VPG K S + +RDS+K+ Sbjct: 327 IDAVRQLIYIKGSVPG-KPGSIVYLRDSWKA 356 >gi|58579302|ref|YP_197514.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Welgevonden] gi|58417928|emb|CAI27132.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Welgevonden] Length = 236 Score = 187 bits (476), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 102/214 (47%), Positives = 146/214 (68%), Gaps = 5/214 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ K+G + +++ EG+RIPVT+LHL + VV + D +GY +V G + N+ Sbjct: 9 RIGLLLEKVGHSAIFDNEGKRIPVTLLHLRDSFVVSIKDKDSHGYTSVVFGMKVST--NM 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP N++ K+FE RV D+L VG+ ++F Q VD+TG ++GKGF+ Sbjct: 67 KKPQLKILQKSNINVNCKIFESRVDHIDNL-TVGAKVLITHFVENQYVDITGCSLGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF GL+A+HGVSISHRS GSTG QDPGRV+K KKMAG +G +RVTV+N++V+S Sbjct: 126 GVMKRHNFKGLKASHGVSISHRSQGSTGQCQDPGRVYKGKKMAGHLGNSRVTVQNIKVIS 185 Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAV 214 VD ++ L++VKG +PGA + S++ VRD+ K V Sbjct: 186 VDKEKSLLVVKGNNIPGA-QGSYLFVRDAIKKPV 218 >gi|242765739|ref|XP_002341035.1| 50S ribosomal protein L3 [Talaromyces stipitatus ATCC 10500] gi|218724231|gb|EED23648.1| 50S ribosomal protein L3 [Talaromyces stipitatus ATCC 10500] Length = 300 Score = 187 bits (476), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 102/213 (47%), Positives = 141/213 (66%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G++A K GMT +Y+ E G+R P TVL LD CQV+ H+T+DK+GY AVQVGAG K + Sbjct: 72 LRTGLLAIKKGMTGLYDPETGKRTPCTVLQLDRCQVISHKTMDKHGYFAVQVGAGFKKPE 131 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++K + G FS V+PK+ + EFRV+ + LL +G + +F VGQ VD T GKG Sbjct: 132 RLTKALVGHFSVNEVAPKRYVHEFRVKDGNGLLEIGHTLTADWFQVGQYVDARSNTKGKG 191 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKRH F G +HGVS++HRS GS G Q G RV+ KKMAG MG + T++NL+ Sbjct: 192 FAGVMKRHGFHGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNVQNTLQNLK 251 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V+ VD G+I+V G V G K + ++D+ K Sbjct: 252 VLEVDPANGIIVVNGSVSGP-KGCLVKLQDALK 283 >gi|146323695|ref|XP_752224.2| 50S ribosomal protein L3 [Aspergillus fumigatus Af293] gi|129557582|gb|EAL90186.2| 50S ribosomal protein L3 [Aspergillus fumigatus Af293] gi|159124862|gb|EDP49979.1| 50S ribosomal protein L3 [Aspergillus fumigatus A1163] Length = 317 Score = 187 bits (475), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 101/201 (50%), Positives = 131/201 (65%), Gaps = 2/201 (0%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GMT VY+ E G+RI TVL LD QVV H+T +GY AVQVGAG Sbjct: 92 LRTGAIAIKKGMTAVYDAETGKRIACTVLQLDRVQVVSHKTRQTHGYNAVQVGAGWKHPS 151 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV+K + G FS+ VSPK+ ++EFRV+ + LLPVG + +F GQ VD + GKG Sbjct: 152 NVTKSLLGHFSTNGVSPKRHVYEFRVKDESGLLPVGQTINADWFQEGQYVDARSYSKGKG 211 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKRH F G +HGVS++HRS GS G Q G RV+ KKMAG MG + TV+NL+ Sbjct: 212 FAGVMKRHGFHGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLK 271 Query: 179 VVSVDDKRGLILVKGCVPGAK 199 V+ VD G+++V G V G K Sbjct: 272 VLKVDADNGIVVVNGSVSGPK 292 >gi|57239336|ref|YP_180472.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Welgevonden] gi|57161415|emb|CAH58339.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Welgevonden] Length = 231 Score = 187 bits (475), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 102/214 (47%), Positives = 146/214 (68%), Gaps = 5/214 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ K+G + +++ EG+RIPVT+LHL + VV + D +GY +V G + N+ Sbjct: 4 RIGLLLEKVGHSAIFDNEGKRIPVTLLHLRDSFVVSIKDKDSHGYTSVVFGMKVST--NM 61 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP N++ K+FE RV D+L VG+ ++F Q VD+TG ++GKGF+ Sbjct: 62 KKPQLKILQKSNINVNCKIFESRVDHIDNL-TVGAKVLITHFVENQYVDITGCSLGKGFA 120 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF GL+A+HGVSISHRS GSTG QDPGRV+K KKMAG +G +RVTV+N++V+S Sbjct: 121 GVMKRHNFKGLKASHGVSISHRSQGSTGQCQDPGRVYKGKKMAGHLGNSRVTVQNIKVIS 180 Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAV 214 VD ++ L++VKG +PGA + S++ VRD+ K V Sbjct: 181 VDKEKSLLVVKGNNIPGA-QGSYLFVRDAIKKPV 213 >gi|149919182|ref|ZP_01907665.1| 50S ribosomal protein L3 [Plesiocystis pacifica SIR-1] gi|149819896|gb|EDM79318.1| 50S ribosomal protein L3 [Plesiocystis pacifica SIR-1] Length = 223 Score = 187 bits (475), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 102/215 (47%), Positives = 133/215 (61%), Gaps = 2/215 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT Y +G R+PVTVL V HRT++++GY A+Q+ + K +SK Sbjct: 6 GLLTKKIGMTEFYKEDGTRVPVTVLLAKGNVVTAHRTVERDGYTALQLAFDDQKASRLSK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P G F VSPK+K+ EFRV D VGS S F+ GQLVDVTG + GKGF G Sbjct: 66 PKLGQFKKAEVSPKRKIKEFRVAADVVAQHAVGSEVDVSIFSDGQLVDVTGTSKGKGFQG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH G + THG +R GS GCR PGRV K+MAG+MG VTV+NLEV V Sbjct: 126 VMKRHGMRGEKRTHGQHEVYRHGGSIGCRLTPGRVIPGKRMAGQMGNETVTVQNLEVAKV 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 +GLILVKG +PG KN ++ +R + K+A+ K Sbjct: 186 IADKGLILVKGAIPGG-KNGYVQIRHAIKAAIRTK 219 >gi|299753327|ref|XP_001833202.2| ribosomal protein L3 [Coprinopsis cinerea okayama7#130] gi|298410250|gb|EAU88475.2| ribosomal protein L3 [Coprinopsis cinerea okayama7#130] Length = 257 Score = 187 bits (475), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 99/203 (48%), Positives = 129/203 (63%), Gaps = 5/203 (2%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVH---RTLDKNGYMAVQVGAGEAKVKNVSKPMRGF 68 M ++N +G + PVTVL LDNCQV + D Y AVQV + + K ++ M G Sbjct: 1 MAALWNDQGVKFPVTVLQLDNCQVTANIKTPRPDHTVYHAVQVASTDRPPKTTTRQMLGH 60 Query: 69 FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128 F+ NV PK+ + EF V D + PVG+ + ++F GQ VDV +IGKGF G MKR Sbjct: 61 FAKANVPPKRYVKEFPVTADAHV-PVGTTLNAAHFVPGQYVDVVAKSIGKGFQGGMKRWG 119 Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188 F GL A+HGVS+SHRS GS G QDPGR++ KKMAGRMGGN+VTV+NL VV VD L Sbjct: 120 FHGLAASHGVSVSHRSSGSAGNSQDPGRIYPGKKMAGRMGGNQVTVQNLAVVRVDTALNL 179 Query: 189 ILVKGCVPGAKKNSWILVRDSFK 211 + V+G VPG N+ + +RD+ K Sbjct: 180 VYVRGAVPGV-DNAPVYIRDAKK 201 >gi|85110563|ref|XP_963521.1| 60S ribosomal protein L3, mitochondrial precursor [Neurospora crassa OR74A] gi|28881355|emb|CAD70397.1| related to ribosomal protein L3 precursor, mitochondrial [Neurospora crassa] gi|28925204|gb|EAA34285.1| 60S ribosomal protein L3, mitochondrial precursor [Neurospora crassa OR74A] Length = 384 Score = 187 bits (475), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 101/214 (47%), Positives = 137/214 (64%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+GV+A K GMT G RIP TVL LD QVV ++T KNGY AVQVG GE + +N Sbjct: 106 LRTGVLAVKKGMTVFMGRTGARIPCTVLQLDRVQVVANKTRAKNGYWAVQVGLGERRAEN 165 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V P G++ + + PK+ L EF+V+ D LLPVG P +F VGQ+VDV G+T G GF Sbjct: 166 VGAPQLGYYEAKGIPPKQTLAEFKVRNQDGLLPVGVQLFPDWFHVGQVVDVRGITRGMGF 225 Query: 121 SGAMKRHNFGGLRATHGVSISHRS-HGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 +G MKRH F G A+HG S++HR+ G + RV KKM GRMG + TV+NL + Sbjct: 226 AGGMKRHGFAGQEASHGNSLNHRTIGSVGGSQGSGSRVLPGKKMPGRMGAQQHTVQNLPI 285 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + VD++ G+++VKG V G K + + V+D+ K A Sbjct: 286 LMVDNELGIVVVKGAVAG-HKGAVVKVQDAVKKA 318 >gi|220935492|ref|YP_002514391.1| ribosomal protein L3 [Thioalkalivibrio sp. HL-EbGR7] gi|254803700|sp|B8GV58|RL3_THISH RecName: Full=50S ribosomal protein L3 gi|219996802|gb|ACL73404.1| ribosomal protein L3 [Thioalkalivibrio sp. HL-EbGR7] Length = 214 Score = 187 bits (475), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 102/213 (47%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RKLGMT V+ +G +PVTV+ +D +V +T +++GY A+QV G K Sbjct: 1 MAIGLVGRKLGMTRVFTEDGASLPVTVIEVDPNRVTQVKTEERDGYRALQVTTGARKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP G F+ V + L+EFR+ D + G+ F GQ+VDVTG++ GKG Sbjct: 61 VTKPRAGHFAKAGVEAGRGLWEFRLDGDQGAEIETGAELKVDIFEAGQIVDVTGISKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KRHNF ATHG S+SHR+ GS G Q PGRVFK KKMAG MG R TV+NLEV Sbjct: 121 FQGVIKRHNFSMQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHMGNERCTVQNLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+L+KG VPG+ + +LVR K+ Sbjct: 181 VRVDVERNLLLIKGAVPGSTGGN-VLVRPGVKA 212 >gi|320094580|ref|ZP_08026346.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 178 str. F0338] gi|319978495|gb|EFW10072.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 178 str. F0338] Length = 221 Score = 187 bits (475), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 95/209 (45%), Positives = 135/209 (64%), Gaps = 2/209 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RK+GMT V++ +GR +P+TV+ + V RT + +GY A+Q+G GE + V+KP Sbjct: 15 LLGRKIGMTQVWDADGRLVPLTVVQVGTNVVTQVRTEEVDGYSAIQLGFGEIDPRKVTKP 74 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 ++G F+ V+P++ L E R + D VG S F GQ VDV+G T GKGF+G M Sbjct: 75 LQGHFAKAGVAPRRHLAEVRTSEHDSY-EVGQELDASTFEAGQSVDVSGNTKGKGFAGVM 133 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH F G+ A+HG +HR GS G PGR+FK +MAGRMGGNR TV+NL + +VD Sbjct: 134 KRHGFAGVSASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGGNRRTVQNLRIQAVDT 193 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+ G +PG KN +LVR + K A Sbjct: 194 EKGLLLISGAIPG-PKNGVVLVRSAVKGA 221 >gi|192360421|ref|YP_001981208.1| 50S ribosomal protein L3 [Cellvibrio japonicus Ueda107] gi|226725144|sp|B3PK37|RL3_CELJU RecName: Full=50S ribosomal protein L3 gi|190686586|gb|ACE84264.1| ribosomal protein L3 [Cellvibrio japonicus Ueda107] Length = 214 Score = 187 bits (475), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 100/216 (46%), Positives = 134/216 (62%), Gaps = 2/216 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT V+ +G IPVTV+ ++ +V +T D +GY AVQ+ GE + Sbjct: 1 MTIGIVGRKTGMTRVFTDDGVSIPVTVIEVEPNRVTQVKTADTDGYSAVQITVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ NV + ++E R + VG+ + F+ GQ +DVTG + GKG+ Sbjct: 61 VTKSEAGHFAKANVEAGRSVWELR-NNSQEAFEVGASLTVEAFSAGQFIDVTGTSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NFG ATHG S SHR GSTG Q PGRVFKNKKM G MG RVTV+NLE+V Sbjct: 120 AGTVKRWNFGMQDATHGNSRSHRVPGSTGQCQSPGRVFKNKKMTGHMGAERVTVQNLEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 VD +R L+LVKG +PGA ++VR + K+ N Sbjct: 180 RVDAERNLLLVKGAIPGAPGGD-VIVRPAVKARTNA 214 >gi|226293678|gb|EEH49098.1| 54S ribosomal protein L9 [Paracoccidioides brasiliensis Pb18] Length = 295 Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 96/201 (47%), Positives = 133/201 (66%), Gaps = 2/201 (0%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+GV+A K GMT +++ E G+R P T+L LD QV+ H+TL K+GY AVQVG G + Sbjct: 72 LRTGVLAIKKGMTAIFDQETGKRTPCTILQLDQVQVISHKTLKKHGYFAVQVGCGWKHER 131 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V++PM G F++ V+PK+ + EFRV+ + LLP+G V + +F GQ VD + G G Sbjct: 132 AVTRPMLGHFAANGVAPKRHIHEFRVKDESGLLPIGEVINADWFQEGQFVDARSNSRGMG 191 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F G MKRH F G +HGVS++HRS GS G Q G RV KKMAG MG +VT++NL Sbjct: 192 FEGVMKRHGFHGQDRSHGVSLAHRSLGSAGPSQGGGSRVHPGKKMAGNMGNEQVTLQNLR 251 Query: 179 VVSVDDKRGLILVKGCVPGAK 199 V+ VD ++G+++V G V G K Sbjct: 252 VLKVDAEKGIVVVNGSVSGPK 272 >gi|104779755|ref|YP_606253.1| 50S ribosomal protein L3 [Pseudomonas entomophila L48] gi|123079277|sp|Q1IFW6|RL3_PSEE4 RecName: Full=50S ribosomal protein L3 gi|95108742|emb|CAK13436.1| 50S ribosomal subunit protein L3 [Pseudomonas entomophila L48] Length = 211 Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 101/212 (47%), Positives = 135/212 (63%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKAGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + ++EFR+++ D G + FT GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRGVWEFRLEEGD--FQAGDLIKAELFTAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA ++VR + K+ Sbjct: 179 RVDAERNLLLIKGAVPGATGGD-VVVRPAVKA 209 >gi|260942335|ref|XP_002615466.1| hypothetical protein CLUG_04349 [Clavispora lusitaniae ATCC 42720] gi|238850756|gb|EEQ40220.1| hypothetical protein CLUG_04349 [Clavispora lusitaniae ATCC 42720] Length = 279 Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 97/198 (48%), Positives = 131/198 (66%), Gaps = 1/198 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ K M + G + TV+ +D+C+V+ +++++K+GY AV +G + K+KNV Sbjct: 61 RPGLLGIKRDMITWFTESGEQFGATVIEVDSCEVIANKSVEKDGYSAVLMGQVD-KLKNV 119 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 S+ S VSPK K EFRV+ DD ++ G+ + YF VGQLVDV ++ GKGF+ Sbjct: 120 SRYHVKLCSDAGVSPKAKFGEFRVRTDDGIISPGTEITADYFAVGQLVDVKAVSKGKGFA 179 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F GLRATHGVS+SHRS GS G QDPGRV KKMAGRMGG TV N EV+ Sbjct: 180 GVMKRHGFKGLRATHGVSVSHRSAGSMGATQDPGRVLPGKKMAGRMGGRNCTVFNNEVLH 239 Query: 182 VDDKRGLILVKGCVPGAK 199 D + G+++VKG +PG K Sbjct: 240 ADGEAGILVVKGQIPGPK 257 >gi|292492421|ref|YP_003527860.1| ribosomal protein L3 [Nitrosococcus halophilus Nc4] gi|291581016|gb|ADE15473.1| ribosomal protein L3 [Nitrosococcus halophilus Nc4] Length = 216 Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 101/215 (46%), Positives = 141/215 (65%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RKLGMT V+ EG IPVTV+ ++ +TL+++ Y A+QV GE + Sbjct: 1 MAIGLVGRKLGMTRVFTDEGESIPVTVIEATPNRISQIKTLERDSYRALQVTLGEKRPSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP++G F+ V P +KL EFR+ + + GS F GQ VDVTG T G+G Sbjct: 61 VTKPLKGHFAKAGVEPGRKLHEFRLAEGEGADAEAGSELKVGLFEAGQKVDVTGTTRGRG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G ++R+ FGG A+HG S+SHR+ GS G Q PGRVFK KKMAG+MG + TV+NLE+ Sbjct: 121 FAGVVRRYRFGGGDASHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGQMGNVQRTVQNLEL 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 V VD++R L+LVKG +PGA ++V+ + K+AV Sbjct: 181 VRVDEERHLLLVKGAIPGAPGGD-VVVKPAAKAAV 214 >gi|312212003|emb|CBX92087.1| similar to 50S ribosomal protein L3 [Leptosphaeria maculans] Length = 328 Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 105/212 (49%), Positives = 139/212 (65%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G++A K GMT +Y+ E G+R TVL LD +V+ H+ DKNGY AVQVGAGE K Sbjct: 82 LRTGLLANKKGMTAMYDPETGKRTACTVLQLDRNEVIAHKRRDKNGYWAVQVGAGEKLPK 141 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGK 118 NV+KPM G F+ VSPK+ + EF+V+ + L +PVGS+ +F VGQ VDV G++ G Sbjct: 142 NVTKPMLGHFAGAAVSPKRWVAEFKVRDEAGLGVPVGSMVGAGWFNVGQWVDVKGISRGM 201 Query: 119 GFSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 GF+G MKRH FGG A+HG S+ HR + G + RV K+MAG MG VTVKNL Sbjct: 202 GFAGGMKRHGFGGQPASHGQSLMHRGMGSAGGSQGSGSRVLPGKRMAGNMGNESVTVKNL 261 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +V+ VD G+++V G VPG KN I V D+ Sbjct: 262 KVLQVDAANGILVVTGAVPGP-KNQIIRVSDA 292 >gi|225678845|gb|EEH17129.1| 50S ribosomal protein L3 [Paracoccidioides brasiliensis Pb03] Length = 295 Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 96/201 (47%), Positives = 133/201 (66%), Gaps = 2/201 (0%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+GV+A K GMT +++ E G+R P T+L LD QV+ H+TL K+GY AVQVG G + Sbjct: 72 LRTGVLAIKKGMTAIFDQETGKRTPCTILQLDQVQVISHKTLKKHGYFAVQVGCGWKHER 131 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V++PM G F++ V+PK+ + EFRV+ + LLP+G V + +F GQ VD + G G Sbjct: 132 AVTRPMLGHFAANGVAPKRHIHEFRVKDESGLLPIGEVINADWFQEGQFVDARSNSRGMG 191 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F G MKRH F G +HGVS++HRS GS G Q G RV KKMAG MG +VT++NL Sbjct: 192 FEGVMKRHGFHGQDRSHGVSLAHRSLGSAGPSQGGGSRVHPGKKMAGNMGNEQVTLQNLR 251 Query: 179 VVSVDDKRGLILVKGCVPGAK 199 V+ VD ++G+++V G V G K Sbjct: 252 VLKVDAEKGIVVVNGSVSGPK 272 >gi|58617356|ref|YP_196555.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Gardel] gi|58416968|emb|CAI28081.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Gardel] Length = 235 Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 100/214 (46%), Positives = 147/214 (68%), Gaps = 5/214 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ K+G + +++ EG+RIPVT+LHL + VV + D +GY +V G + N+ Sbjct: 8 RIGLLLEKVGHSAIFDNEGKRIPVTLLHLRDSFVVSIKDKDSHGYTSVVFGMKVST--NM 65 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP N++ K+FE RV D+L+ VG+ ++F Q VD+TG ++GKGF+ Sbjct: 66 KKPQLKILQKSNINVNCKIFESRVDHIDNLV-VGAKVLITHFVENQYVDITGHSLGKGFA 124 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF GL+A+HGVSISHRS GSTG QDPGRV+K KKMAG +G ++VTV+N++V+S Sbjct: 125 GVMKRHNFKGLKASHGVSISHRSQGSTGQCQDPGRVYKGKKMAGHLGNSKVTVQNIKVIS 184 Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAV 214 VD ++ L++VKG +PGA + S++ VRD+ K + Sbjct: 185 VDKEKSLLVVKGNNIPGA-QGSYLFVRDAIKKPI 217 >gi|330430101|gb|AEC21435.1| 50S ribosomal protein L3 [Pusillimonas sp. T7-7] Length = 229 Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 101/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+V RK+GMT ++ EG IPVTVL + N +V ++ + +GY AVQV G + V Sbjct: 12 RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQVKSPETDGYAAVQVAYGTRRASRV 71 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQ--KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP G ++ L EFR+ K + V S F GQ VDVTG TIGKG Sbjct: 72 TKPQAGHYAKAGAEAGSILKEFRLDPAKAAEFTAGAVVAVESVFEAGQKVDVTGTTIGKG 131 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KRH+F G R +HG S+SHR+ GSTG QDPGRVF KKM+G +G TV+NL++ Sbjct: 132 YAGTIKRHHFAGQRNSHGNSVSHRAPGSTGMAQDPGRVFPGKKMSGHLGDATRTVQNLDI 191 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +RGL+LVKG VPG KN+ I+VR + K Sbjct: 192 VRVDAERGLLLVKGAVPG-HKNADIVVRPAIK 222 >gi|307823442|ref|ZP_07653671.1| 50S ribosomal protein L3 [Methylobacter tundripaludum SV96] gi|307735427|gb|EFO06275.1| 50S ribosomal protein L3 [Methylobacter tundripaludum SV96] Length = 216 Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 99/200 (49%), Positives = 134/200 (67%), Gaps = 1/200 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK GMT V+ +G +PVTVL +D+ +V + ++ +GY ++QV AG+ K Sbjct: 1 MSIGLIGRKCGMTRVFCEDGSSVPVTVLQIDSNRVTQVKGIEVDGYRSIQVAAGDKKSSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K M G +++ NV+ + L+EFR++ + + L VGS S F+ GQ+VDV G +IGKG Sbjct: 61 VNKAMAGHYAAANVTAGRGLWEFRLEDGEGEDLSVGSQLSLDVFSAGQVVDVQGKSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRHNF ATHG S SHR GS G Q PGRVFK KKM G MG +VTV+NL + Sbjct: 121 FAGGIKRHNFSMQDATHGNSRSHRVLGSIGMCQTPGRVFKGKKMEGHMGAEKVTVQNLTI 180 Query: 180 VSVDDKRGLILVKGCVPGAK 199 S+D R LILVKG VPGAK Sbjct: 181 HSIDTARNLILVKGAVPGAK 200 >gi|300775014|ref|ZP_07084877.1| 50S ribosomal protein L3 [Chryseobacterium gleum ATCC 35910] gi|300506829|gb|EFK37964.1| 50S ribosomal protein L3 [Chryseobacterium gleum ATCC 35910] Length = 208 Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 99/206 (48%), Positives = 136/206 (66%), Gaps = 3/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT ++N EG+ IP TV+ C V+ RTL+K+GY AVQ+G + KNV Sbjct: 2 SGIIGKKIGMTSLFNEEGKNIPCTVIQAGPCSVLQVRTLEKDGYKAVQLGFDDKSEKNVG 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K + G F +PK KL EF + D++ VG F G+ VDVTG + GKGF G Sbjct: 62 KALAGHFKKAGSAPKAKLVEFYREFVDEV-KVGEEVKVDLFAEGEYVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG ++ATHG R+ GS G DP RVFK +MAGRMGG +VTV+NL+V+ Sbjct: 121 VVKRHGFGGVMQATHGQHNRLRAPGSIGAGSDPSRVFKGMRMAGRMGGKQVTVQNLQVLK 180 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 VD ++ L++VKG VPGA KNS++++R Sbjct: 181 VDQEQNLLVVKGAVPGA-KNSYVIIR 205 >gi|145356307|ref|XP_001422374.1| Putative mitochondrial ribosomal protein L3 [Ostreococcus lucimarinus CCE9901] gi|144582616|gb|ABP00691.1| Putative mitochondrial ribosomal protein L3 [Ostreococcus lucimarinus CCE9901] Length = 211 Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 103/211 (48%), Positives = 133/211 (63%), Gaps = 3/211 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVKN 60 R+G VA K GMTC ++ G RIP+TVL +D+C+VV +T +GY AVQVG G K K Sbjct: 2 RTGAVAIKTGMTCDWDARGTRIPLTVLWIDDCEVVAAKTSSGADGYDAVQVGYGSRKPKQ 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G+F + K+ L EFR D L P G+ + ++F GQ VDV G+T GKGF Sbjct: 62 VTKAELGYFVRRKTNIKRALCEFRTSADGVLAP-GTAITAAHFAAGQYVDVQGVTKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G MKR F G A+HG + HR+HGS G QDPGRVFK KKMAGRMGG TV++ V Sbjct: 121 QGPMKRWGFSGQPASHGNTKKHRAHGSIGQCQDPGRVFKGKKMAGRMGGRTRTVQSAYVY 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD ++ L+ VKG VPG + + +RDS + Sbjct: 181 KVDTEKNLVYVKGQVPGNAGMA-VKIRDSLR 210 >gi|126453776|ref|YP_001068034.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1106a] gi|134283182|ref|ZP_01769883.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 305] gi|217424706|ref|ZP_03456203.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 576] gi|237814145|ref|YP_002898596.1| 50S ribosomal protein L3 [Burkholderia pseudomallei MSHR346] gi|238563921|ref|ZP_00438031.2| 50S ribosomal protein L3 [Burkholderia mallei GB8 horse 4] gi|242314689|ref|ZP_04813705.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1106b] gi|251767493|ref|ZP_02267491.2| 50S ribosomal protein L3 [Burkholderia mallei PRL-20] gi|254174782|ref|ZP_04881443.1| 50S ribosomal protein L3 [Burkholderia mallei ATCC 10399] gi|254198510|ref|ZP_04904931.1| 50S ribosomal protein L3 [Burkholderia pseudomallei S13] gi|254201239|ref|ZP_04907603.1| 50S ribosomal protein L3 [Burkholderia mallei FMH] gi|254206580|ref|ZP_04912931.1| 50S ribosomal protein L3 [Burkholderia mallei JHU] gi|254260454|ref|ZP_04951508.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1710a] gi|254300578|ref|ZP_04968023.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 406e] gi|254357118|ref|ZP_04973392.1| 50S ribosomal protein L3 [Burkholderia mallei 2002721280] gi|212288252|sp|A3P0B3|RL3_BURP0 RecName: Full=50S ribosomal protein L3 gi|126227418|gb|ABN90958.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1106a] gi|134245377|gb|EBA45470.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 305] gi|147747133|gb|EDK54209.1| 50S ribosomal protein L3 [Burkholderia mallei FMH] gi|147752122|gb|EDK59188.1| 50S ribosomal protein L3 [Burkholderia mallei JHU] gi|148026182|gb|EDK84267.1| 50S ribosomal protein L3 [Burkholderia mallei 2002721280] gi|157810515|gb|EDO87685.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 406e] gi|160695827|gb|EDP85797.1| 50S ribosomal protein L3 [Burkholderia mallei ATCC 10399] gi|169655250|gb|EDS87943.1| 50S ribosomal protein L3 [Burkholderia pseudomallei S13] gi|217392162|gb|EEC32187.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 576] gi|237506368|gb|ACQ98686.1| 50S ribosomal protein L3 [Burkholderia pseudomallei MSHR346] gi|238519676|gb|EEP83145.1| 50S ribosomal protein L3 [Burkholderia mallei GB8 horse 4] gi|242137928|gb|EES24330.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1106b] gi|243062596|gb|EES44782.1| 50S ribosomal protein L3 [Burkholderia mallei PRL-20] gi|254219143|gb|EET08527.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1710a] Length = 223 Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 97/200 (48%), Positives = 128/200 (64%), Gaps = 1/200 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 5 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 64 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR++ D L G+V P F VGQ VDV G++IGKG Sbjct: 65 VTKPLAGHLAKAGVEAGEILKEFRIEADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKG 124 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 125 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 184 Query: 180 VSVDDKRGLILVKGCVPGAK 199 +D R L+LVKG VPGAK Sbjct: 185 ARIDADRKLLLVKGAVPGAK 204 >gi|282857362|ref|ZP_06266599.1| 50S ribosomal protein L3 [Pyramidobacter piscolens W5455] gi|282584862|gb|EFB90193.1| 50S ribosomal protein L3 [Pyramidobacter piscolens W5455] Length = 208 Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 96/206 (46%), Positives = 133/206 (64%), Gaps = 2/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT V+N G+ +PVTV+ C VV RT +KNGY A+ +G GE K + Sbjct: 1 MSLGILGQKLGMTRVFNEAGQSVPVTVIAAGPCPVVDVRTPEKNGYSAILLGLGERKPRK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G + V P + L EFR++ + G + + F G+ V VTG + GKGF Sbjct: 61 VTKPLQGMYDRCGVRPCRWLREFRIENSAEY-KAGQIVDVAVFAEGETVSVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGL+A+HGVS+SHR S+G P +FK K M G +G RVT+KNL VV Sbjct: 120 AGVMKRWNFGGLQASHGVSVSHRKPASSGASSYPSHIFKGKAMPGHLGNERVTIKNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 +VD + L+L+KG VPGA KN +L+ Sbjct: 180 AVDKENNLLLIKGAVPGA-KNGLVLI 204 >gi|119899706|ref|YP_934919.1| 50S ribosomal protein L3 [Azoarcus sp. BH72] gi|166233115|sp|A1KB27|RL3_AZOSB RecName: Full=50S ribosomal protein L3 gi|119672119|emb|CAL96033.1| 50S ribosomal protein L3 [Azoarcus sp. BH72] Length = 212 Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 104/213 (48%), Positives = 137/213 (64%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +GR IPVTVL + + +V +T + +GY AVQV G+ + Sbjct: 1 MSLGLVGRKVGMTRIFADDGRSIPVTVLDVSDNKVTQIKTPEADGYSAVQVAFGKRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V KP+ G + V P + L EFRV+ + L G S F+VGQ VDVTG++IGKG Sbjct: 61 VVKPIAGHLAKAGVEPSRVLKEFRVEPEGLASLKAGDQVSVEIFSVGQKVDVTGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNF RA+HG S+SH S GS G QDPGRVF K+MAG+ G + T LEV Sbjct: 121 FSGPIKRHNFSSNRASHGNSVSHNSPGSIGMAQDPGRVFPGKRMAGQYGAVQRTTLGLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LVKG VPGAK ++VR + K+ Sbjct: 181 VRVDAERQLLLVKGAVPGAKGGD-VVVRPAIKA 212 >gi|53720821|ref|YP_109807.1| 50S ribosomal protein L3 [Burkholderia pseudomallei K96243] gi|53723854|ref|YP_104166.1| 50S ribosomal protein L3 [Burkholderia mallei ATCC 23344] gi|76808912|ref|YP_335140.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1710b] gi|121599817|ref|YP_994456.1| 50S ribosomal protein L3 [Burkholderia mallei SAVP1] gi|124384577|ref|YP_001027895.1| 50S ribosomal protein L3 [Burkholderia mallei NCTC 10229] gi|126441597|ref|YP_001060750.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 668] gi|126449489|ref|YP_001082990.1| 50S ribosomal protein L3 [Burkholderia mallei NCTC 10247] gi|167721577|ref|ZP_02404813.1| 50S ribosomal protein L3 [Burkholderia pseudomallei DM98] gi|167740551|ref|ZP_02413325.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 14] gi|167817756|ref|ZP_02449436.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 91] gi|167826153|ref|ZP_02457624.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 9] gi|167847665|ref|ZP_02473173.1| 50S ribosomal protein L3 [Burkholderia pseudomallei B7210] gi|167896237|ref|ZP_02483639.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 7894] gi|167904619|ref|ZP_02491824.1| 50S ribosomal protein L3 [Burkholderia pseudomallei NCTC 13177] gi|167912884|ref|ZP_02499975.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 112] gi|167920844|ref|ZP_02507935.1| 50S ribosomal protein L3 [Burkholderia pseudomallei BCC215] gi|254180339|ref|ZP_04886937.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1655] gi|254190302|ref|ZP_04896810.1| 50S ribosomal protein L3 [Burkholderia pseudomallei Pasteur 52237] gi|81823913|sp|Q62GK5|RL3_BURMA RecName: Full=50S ribosomal protein L3 gi|81824632|sp|Q63Q11|RL3_BURPS RecName: Full=50S ribosomal protein L3 gi|109893415|sp|Q3JMR3|RL3_BURP1 RecName: Full=50S ribosomal protein L3 gi|166233124|sp|A3MRV4|RL3_BURM7 RecName: Full=50S ribosomal protein L3 gi|166233125|sp|A2S7H6|RL3_BURM9 RecName: Full=50S ribosomal protein L3 gi|166233126|sp|A1V8A3|RL3_BURMS RecName: Full=50S ribosomal protein L3 gi|166233127|sp|A3NEH9|RL3_BURP6 RecName: Full=50S ribosomal protein L3 gi|52211235|emb|CAH37224.1| 50S ribosomal protein L3 [Burkholderia pseudomallei K96243] gi|52427277|gb|AAU47870.1| ribosomal protein L3 [Burkholderia mallei ATCC 23344] gi|76578365|gb|ABA47840.1| ribosomal protein L3 [Burkholderia pseudomallei 1710b] gi|121228627|gb|ABM51145.1| 50S ribosomal protein L3 [Burkholderia mallei SAVP1] gi|124292597|gb|ABN01866.1| 50S ribosomal protein L3 [Burkholderia mallei NCTC 10229] gi|126221090|gb|ABN84596.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 668] gi|126242359|gb|ABO05452.1| 50S ribosomal protein L3 [Burkholderia mallei NCTC 10247] gi|157937978|gb|EDO93648.1| 50S ribosomal protein L3 [Burkholderia pseudomallei Pasteur 52237] gi|184210878|gb|EDU07921.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1655] Length = 219 Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 97/200 (48%), Positives = 128/200 (64%), Gaps = 1/200 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR++ D L G+V P F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEILKEFRIEADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAK 199 +D R L+LVKG VPGAK Sbjct: 181 ARIDADRKLLLVKGAVPGAK 200 >gi|260655383|ref|ZP_05860871.1| 50S ribosomal protein L3 [Jonquetella anthropi E3_33 E1] gi|260629831|gb|EEX48025.1| 50S ribosomal protein L3 [Jonquetella anthropi E3_33 E1] Length = 207 Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 104/203 (51%), Positives = 132/203 (65%), Gaps = 2/203 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT VY+ EGR IPVTV+ C VV RT +KNGY AV +G E K + VSK Sbjct: 3 GILGQKVGMTRVYSEEGRAIPVTVIAAGPCPVVDLRTPEKNGYSAVLLGFSERKPQRVSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+P + L EFRV D +G + S F G+ VDVTG + GKG +G Sbjct: 63 PLAGTFKRAGVTPCRWLREFRVA-DSGKWEIGGTVNVSLFQAGEAVDVTGTSKGKGTAGV 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR+ FGG A+HGVS +HR S+G P RVFK K+M GRMG RVTVKNL VV++D Sbjct: 122 IKRYGFGGAPASHGVSKTHRKPNSSGASSYPSRVFKGKRMPGRMGNERVTVKNLTVVAID 181 Query: 184 DKRGLILVKGCVPGAKKNSWILV 206 + L+LVKG VPGA KN +LV Sbjct: 182 VENNLLLVKGAVPGA-KNGLVLV 203 >gi|237653996|ref|YP_002890310.1| 50S ribosomal protein L3 [Thauera sp. MZ1T] gi|237625243|gb|ACR01933.1| ribosomal protein L3 [Thauera sp. MZ1T] Length = 212 Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 100/213 (46%), Positives = 138/213 (64%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G+ IPVTVL + + +V +T+D +GY AVQ+ G+ + Sbjct: 1 MSLGLVGRKVGMTRIFAEDGKTIPVTVLDVSDNRVSQIKTIDTDGYAAVQIAYGKRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP+ G + V P + + EFRV+ + + G F VGQ VDVTG+TIGKG Sbjct: 61 ITKPVAGHLAKAGVEPCRGIKEFRVEAEQAGSMNAGDAVGADLFQVGQKVDVTGVTIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNF RA+HG SISH S GS G QDPGRVF K+MAG+ G + T + LE+ Sbjct: 121 FSGPIKRHNFSSNRASHGNSISHNSPGSIGMAQDPGRVFPGKRMAGQYGNVQRTTQGLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LVKG VPGAK ++VR + K+ Sbjct: 181 VRVDVERQLLLVKGAVPGAKGGD-VVVRPAVKA 212 >gi|167582623|ref|ZP_02375497.1| 50S ribosomal protein L3 [Burkholderia thailandensis TXDOH] gi|167620737|ref|ZP_02389368.1| 50S ribosomal protein L3 [Burkholderia thailandensis Bt4] Length = 219 Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 97/200 (48%), Positives = 128/200 (64%), Gaps = 1/200 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR++ D L G+V P F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVQAGEILKEFRIEADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAK 199 +D R L+LVKG VPGAK Sbjct: 181 ARIDADRKLLLVKGAVPGAK 200 >gi|327332709|gb|EGE74443.1| 50S ribosomal protein L3 [Propionibacterium acnes HL097PA1] Length = 223 Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 102/210 (48%), Positives = 131/210 (62%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ KLGMT +++ R +PVTV+ C V RT + +GY AVQ+G G K KNV+K Sbjct: 9 GVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTSETDGYSAVQLGYGAVKAKNVTK 68 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ L E R D +G + F+ VDVTG + GKG +G Sbjct: 69 PEAGHFEKAGVTPRRHLVELRTA-DASEYTLGQEIAADVFSESDFVDVTGTSKGKGTAGV 127 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH FGGLRATHGV HRS GS G PG+V K +MAGRMG RVTV+NL+V SVD Sbjct: 128 MKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQNLQVHSVD 187 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +RG++LV+G VPG K S ++VR + K A Sbjct: 188 AERGIMLVRGAVPGP-KGSLLVVRSAAKKA 216 >gi|313836021|gb|EFS73735.1| 50S ribosomal protein L3 [Propionibacterium acnes HL037PA2] gi|314929560|gb|EFS93391.1| 50S ribosomal protein L3 [Propionibacterium acnes HL044PA1] gi|314970555|gb|EFT14653.1| 50S ribosomal protein L3 [Propionibacterium acnes HL037PA3] gi|328906230|gb|EGG26005.1| 50S ribosomal protein L3 [Propionibacterium sp. P08] Length = 223 Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 101/211 (47%), Positives = 132/211 (62%), Gaps = 2/211 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ KLGMT +++ + +PVTV+ C V RT + +GY AVQ+G G K KNV+K Sbjct: 9 GVLGTKLGMTQLWDEHNKLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKNVTK 68 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ L E R D +G + F+ VDVTG + GKG +G Sbjct: 69 PEAGHFEKAGVTPRRHLVELRTA-DASEYTLGQEITAGVFSESDFVDVTGTSKGKGTAGV 127 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH FGGLRATHGV HRS GS G PG+V K +MAGRMG +RVTV+NL+V SVD Sbjct: 128 MKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGTDRVTVQNLQVHSVD 187 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 +RG++LV+G VPG K S ++VR + K A Sbjct: 188 AERGIMLVRGAVPGP-KGSLLVVRSAAKKAA 217 >gi|50843318|ref|YP_056545.1| 50S ribosomal protein L3 [Propionibacterium acnes KPA171202] gi|289427657|ref|ZP_06429369.1| 50S ribosomal protein L3 [Propionibacterium acnes J165] gi|295131387|ref|YP_003582050.1| 50S ribosomal protein L3 [Propionibacterium acnes SK137] gi|81826389|sp|Q6A6M6|RL3_PROAC RecName: Full=50S ribosomal protein L3 gi|50840920|gb|AAT83587.1| 50S ribosomal protein L3 [Propionibacterium acnes KPA171202] gi|289159148|gb|EFD07340.1| 50S ribosomal protein L3 [Propionibacterium acnes J165] gi|291377388|gb|ADE01243.1| 50S ribosomal protein L3 [Propionibacterium acnes SK137] gi|313773097|gb|EFS39063.1| 50S ribosomal protein L3 [Propionibacterium acnes HL074PA1] gi|313808839|gb|EFS47293.1| 50S ribosomal protein L3 [Propionibacterium acnes HL087PA2] gi|313810367|gb|EFS48081.1| 50S ribosomal protein L3 [Propionibacterium acnes HL083PA1] gi|313812297|gb|EFS50011.1| 50S ribosomal protein L3 [Propionibacterium acnes HL025PA1] gi|313818019|gb|EFS55733.1| 50S ribosomal protein L3 [Propionibacterium acnes HL046PA2] gi|313819932|gb|EFS57646.1| 50S ribosomal protein L3 [Propionibacterium acnes HL036PA1] gi|313823422|gb|EFS61136.1| 50S ribosomal protein L3 [Propionibacterium acnes HL036PA2] gi|313824894|gb|EFS62608.1| 50S ribosomal protein L3 [Propionibacterium acnes HL063PA1] gi|313830136|gb|EFS67850.1| 50S ribosomal protein L3 [Propionibacterium acnes HL007PA1] gi|313832593|gb|EFS70307.1| 50S ribosomal protein L3 [Propionibacterium acnes HL056PA1] gi|314925788|gb|EFS89619.1| 50S ribosomal protein L3 [Propionibacterium acnes HL036PA3] gi|314960868|gb|EFT04969.1| 50S ribosomal protein L3 [Propionibacterium acnes HL002PA2] gi|314973015|gb|EFT17111.1| 50S ribosomal protein L3 [Propionibacterium acnes HL053PA1] gi|314975511|gb|EFT19606.1| 50S ribosomal protein L3 [Propionibacterium acnes HL045PA1] gi|314979747|gb|EFT23841.1| 50S ribosomal protein L3 [Propionibacterium acnes HL072PA2] gi|314986053|gb|EFT30145.1| 50S ribosomal protein L3 [Propionibacterium acnes HL005PA2] gi|314988669|gb|EFT32760.1| 50S ribosomal protein L3 [Propionibacterium acnes HL005PA3] gi|315079850|gb|EFT51826.1| 50S ribosomal protein L3 [Propionibacterium acnes HL078PA1] gi|315083218|gb|EFT55194.1| 50S ribosomal protein L3 [Propionibacterium acnes HL027PA2] gi|315086828|gb|EFT58804.1| 50S ribosomal protein L3 [Propionibacterium acnes HL002PA3] gi|315089921|gb|EFT61897.1| 50S ribosomal protein L3 [Propionibacterium acnes HL072PA1] gi|315096757|gb|EFT68733.1| 50S ribosomal protein L3 [Propionibacterium acnes HL038PA1] gi|315106073|gb|EFT78049.1| 50S ribosomal protein L3 [Propionibacterium acnes HL030PA1] gi|327325171|gb|EGE66977.1| 50S ribosomal protein L3 [Propionibacterium acnes HL096PA3] gi|327325199|gb|EGE67004.1| 50S ribosomal protein L3 [Propionibacterium acnes HL096PA2] gi|327444000|gb|EGE90654.1| 50S ribosomal protein L3 [Propionibacterium acnes HL043PA1] gi|327449372|gb|EGE96026.1| 50S ribosomal protein L3 [Propionibacterium acnes HL013PA2] gi|327449400|gb|EGE96054.1| 50S ribosomal protein L3 [Propionibacterium acnes HL043PA2] gi|328756283|gb|EGF69899.1| 50S ribosomal protein L3 [Propionibacterium acnes HL020PA1] gi|328761383|gb|EGF74910.1| 50S ribosomal protein L3 [Propionibacterium acnes HL099PA1] Length = 223 Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 102/210 (48%), Positives = 131/210 (62%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ KLGMT +++ R +PVTV+ C V RT + +GY AVQ+G G K KNV+K Sbjct: 9 GVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKNVTK 68 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ L E R D +G + F+ VDVTG + GKG +G Sbjct: 69 PEAGHFEKAGVTPRRHLVELRTA-DASEYTLGQEIAADVFSESDFVDVTGTSKGKGTAGV 127 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH FGGLRATHGV HRS GS G PG+V K +MAGRMG RVTV+NL+V SVD Sbjct: 128 MKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQNLQVHSVD 187 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +RG++LV+G VPG K S ++VR + K A Sbjct: 188 AERGIMLVRGAVPGP-KGSLLVVRSAAKKA 216 >gi|148545739|ref|YP_001265841.1| 50S ribosomal protein L3 [Pseudomonas putida F1] gi|161378147|ref|NP_742620.2| 50S ribosomal protein L3 [Pseudomonas putida KT2440] gi|167031500|ref|YP_001666731.1| 50S ribosomal protein L3 [Pseudomonas putida GB-1] gi|325272044|ref|ZP_08138485.1| 50S ribosomal protein L3 [Pseudomonas sp. TJI-51] gi|42559622|sp|Q88QN5|RL3_PSEPK RecName: Full=50S ribosomal protein L3 gi|166233182|sp|A5VXP7|RL3_PSEP1 RecName: Full=50S ribosomal protein L3 gi|189042858|sp|B0KK67|RL3_PSEPG RecName: Full=50S ribosomal protein L3 gi|148509797|gb|ABQ76657.1| LSU ribosomal protein L3P [Pseudomonas putida F1] gi|166857988|gb|ABY96395.1| ribosomal protein L3 [Pseudomonas putida GB-1] gi|313496819|gb|ADR58185.1| RplC [Pseudomonas putida BIRD-1] gi|324102821|gb|EGC00227.1| 50S ribosomal protein L3 [Pseudomonas sp. TJI-51] Length = 211 Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 100/212 (47%), Positives = 135/212 (63%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GV+ RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVIGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + ++EFR+++ D G + FT GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRGVWEFRLEEGD--FQAGDLIKAELFTAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA ++VR + K+ Sbjct: 179 RVDAERNLLLIKGAVPGATGGD-VVVRPAVKA 209 >gi|24981833|gb|AAN66084.1|AE016238_2 ribosomal protein L3 [Pseudomonas putida KT2440] Length = 222 Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 100/212 (47%), Positives = 135/212 (63%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GV+ RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 12 MTIGVIGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 71 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + ++EFR+++ D G + FT GQLVDVTG + GKGF Sbjct: 72 VTAAQAGHFAKANVAAGRGVWEFRLEEGD--FQAGDLIKAELFTAGQLVDVTGQSKGKGF 129 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 130 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 189 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA ++VR + K+ Sbjct: 190 RVDAERNLLLIKGAVPGATGGD-VVVRPAVKA 220 >gi|114319619|ref|YP_741302.1| 50S ribosomal protein L3P [Alkalilimnicola ehrlichii MLHE-1] gi|122312456|sp|Q0ABH5|RL3_ALHEH RecName: Full=50S ribosomal protein L3 gi|114226013|gb|ABI55812.1| LSU ribosomal protein L3P [Alkalilimnicola ehrlichii MLHE-1] Length = 218 Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 99/199 (49%), Positives = 128/199 (64%), Gaps = 1/199 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT V+ +G +PVTV+ +V RT +++GY VQV AG + Sbjct: 1 MSIGIVGRKAGMTRVFTEDGASVPVTVIEASPNRVTQVRTPERDGYSGVQVTAGSRRPNR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 VSKPM G F++ V + ++EFRV + L G + F GQ+VD+TG + GKG Sbjct: 61 VSKPMAGHFAAAGVDAGRGVWEFRVSDGQAIELEAGKELTVETFEAGQVVDITGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRHNF ATHG S++HR+ GS G Q PGRVFK KKMAG+MG R TVKNLEV Sbjct: 121 FAGTVKRHNFRTQDATHGNSLAHRAPGSIGQNQTPGRVFKGKKMAGQMGNKRSTVKNLEV 180 Query: 180 VSVDDKRGLILVKGCVPGA 198 V VD +R L+LV+G VPGA Sbjct: 181 VRVDAERHLLLVRGSVPGA 199 >gi|148652238|ref|YP_001279331.1| 50S ribosomal protein L3 [Psychrobacter sp. PRwf-1] gi|172048471|sp|A5WCJ0|RL3_PSYWF RecName: Full=50S ribosomal protein L3 gi|148571322|gb|ABQ93381.1| LSU ribosomal protein L3P [Psychrobacter sp. PRwf-1] Length = 212 Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 136/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V +K GMT V+ G IPVTV+ +D ++ +T D +GY A+Q+ GE + Sbjct: 1 MAIGLVGKKCGMTRVFTETGASIPVTVVEVDANRITQIKTNDTDGYQAIQITTGERRDSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V + ++EFRV +++ + GS + F GQLVDVTG + GKG Sbjct: 61 VTAAQKGHFAKAGVKAGRGVWEFRVTEEELEGREAGSEIAADLFEAGQLVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KRHNF ATHG S+SHR GSTG Q PG+VFK KKM G+MG RVTV+ LEV Sbjct: 121 FQGGVKRHNFSMQDATHGNSVSHRVLGSTGQNQSPGKVFKGKKMPGQMGNKRVTVQGLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VSVD ++GL+++KG +PGA ++VR S K+ Sbjct: 181 VSVDAEKGLLVIKGAIPGANGGD-VIVRPSIKA 212 >gi|167518906|ref|XP_001743793.1| hypothetical protein [Monosiga brevicollis MX1] gi|163777755|gb|EDQ91371.1| predicted protein [Monosiga brevicollis MX1] Length = 309 Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 98/214 (45%), Positives = 143/214 (66%), Gaps = 2/214 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+ ++A+KLGMT ++ G IP+TVL +++CQVV HRT++++GY A+ +GA K + Sbjct: 66 RAPLIAKKLGMTQTWDRWGTLIPMTVLQVEDCQVVGHRTIERDGYEALILGAETIKDSKL 125 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +RG F+ + K+ + E R+ + +LP+G S +F GQLVDV G TIGKGF+ Sbjct: 126 DGRIRGQFAKHGLPSKRHMEEARISAEA-MLPIGYELSCEHFEPGQLVDVRGTTIGKGFA 184 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF G+ ATHGV+ +HR G G QDPGRV+K K+ AGRMGG +NL V+ Sbjct: 185 GVMKRHNFKGMPATHGVTKTHRRMGGFGGGQDPGRVWKGKRNAGRMGGVLRWQRNLAVIR 244 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +D + LI+V G +PGA +NS +LVRD+ + ++ Sbjct: 245 IDTRYNLIMVAGSIPGA-ENSRVLVRDAIMNPLH 277 >gi|325267188|ref|ZP_08133855.1| 50S ribosomal protein L3 [Kingella denitrificans ATCC 33394] gi|324981351|gb|EGC16996.1| 50S ribosomal protein L3 [Kingella denitrificans ATCC 33394] Length = 215 Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 104/214 (48%), Positives = 135/214 (63%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V+ +G IPVTVL + +V ++ + +GY AVQV GE K + Sbjct: 1 MTLGLVGRKVGMTRVFTEQGESIPVTVLEMSANRVTQVKSKETDGYTAVQVTFGEKKTSH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF V ++ L G + F+ GQLVDVTG + GKG Sbjct: 61 VNKAQAGHFAKAGVEAGRGLHEFVVSEEKAAELKAGDSVTVELFSAGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV++LE+ Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKSTVQHLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V VD +R L+LVKG VPGA NS ++VR S K A Sbjct: 181 VRVDVERNLLLVKGAVPGA-VNSDVVVRHSVKKA 213 >gi|83720557|ref|YP_443572.1| 50S ribosomal protein L3 [Burkholderia thailandensis E264] gi|257137645|ref|ZP_05585907.1| 50S ribosomal protein L3 [Burkholderia thailandensis E264] gi|109893417|sp|Q2SU27|RL3_BURTA RecName: Full=50S ribosomal protein L3 gi|83654382|gb|ABC38445.1| ribosomal protein L3 [Burkholderia thailandensis E264] Length = 219 Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 97/200 (48%), Positives = 128/200 (64%), Gaps = 1/200 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR++ D L G+V P F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVQTGEILKEFRIEADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAK 199 +D R L+LVKG VPGAK Sbjct: 181 ARIDADRKLLLVKGAVPGAK 200 >gi|294789223|ref|ZP_06754462.1| 50S ribosomal protein L3 [Simonsiella muelleri ATCC 29453] gi|294482964|gb|EFG30652.1| 50S ribosomal protein L3 [Simonsiella muelleri ATCC 29453] Length = 215 Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 103/214 (48%), Positives = 135/214 (63%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTVL + +V ++ + +GY AVQV GE K Sbjct: 1 MTLGLVGRKVGMTRIFTEQGESIPVTVLEMSTNRVTQVKSKETDGYTAVQVTFGEKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP G F+ V + L EF V ++ L G+V + F GQLVDVTG + GKG Sbjct: 61 VTKPEAGHFAKAGVEAGRGLHEFVVSEEKAAELKAGNVLTVELFQAGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV++LE+ Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKSTVQHLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V VD +R L+LVKG VPG+ NS ++V S K A Sbjct: 181 VRVDVERNLLLVKGAVPGS-VNSDVVVCHSVKKA 213 >gi|330505207|ref|YP_004382076.1| 50S ribosomal protein L3 [Pseudomonas mendocina NK-01] gi|328919493|gb|AEB60324.1| 50S ribosomal protein L3 [Pseudomonas mendocina NK-01] Length = 209 Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 102/212 (48%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V + + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKNEESDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK G F+ NV+ + + EFR+++ D G + + F GQLVDVTG + GKGF Sbjct: 61 VSKAQAGHFAKANVAAGRTVLEFRLEEGD--YQAGDLINAEIFQAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA ++VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGD-VIVRPAVKA 209 >gi|269128516|ref|YP_003301886.1| 50S ribosomal protein L3 [Thermomonospora curvata DSM 43183] gi|268313474|gb|ACY99848.1| ribosomal protein L3 [Thermomonospora curvata DSM 43183] Length = 216 Score = 185 bits (469), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 101/212 (47%), Positives = 131/212 (61%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R GV+ KLGMT V++ EGR +PVTV+ C V RT +K+GY AVQ+G G+ + V Sbjct: 5 RKGVLGEKLGMTQVFDDEGRIVPVTVVQAGPCVVTQIRTPEKDGYSAVQIGYGQVNPRKV 64 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F+ V+P++ L E R D +G + F G+ VDVTG T GKG + Sbjct: 65 NKPRMGHFAKAGVTPRRYLTEVRTD-DASEYTLGQEITVEIFKAGEKVDVTGTTKGKGTA 123 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH FGGL A+HG HRS GS G PGRVFK +MAGRMG R TV+NL + + Sbjct: 124 GVMKRHGFGGLGASHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNVRKTVQNLTIHA 183 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD +GL+L+KG +PG +LVRD+ K A Sbjct: 184 VDPDKGLLLIKGAIPGP-NGGLVLVRDAVKGA 214 >gi|146308923|ref|YP_001189388.1| 50S ribosomal protein L3 [Pseudomonas mendocina ymp] gi|166233181|sp|A4XZ90|RL3_PSEMY RecName: Full=50S ribosomal protein L3 gi|145577124|gb|ABP86656.1| LSU ribosomal protein L3P [Pseudomonas mendocina ymp] Length = 209 Score = 185 bits (469), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 102/212 (48%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V + + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKNEESDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK G F+ NV+ + + EFR+++ D G + + F GQLVDVTG + GKGF Sbjct: 61 VSKAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDLINAEIFQAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA ++VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGD-VIVRPAVKA 209 >gi|313667441|ref|YP_004047725.1| 50S ribosomal protein L3 [Neisseria lactamica ST-640] gi|313004903|emb|CBN86329.1| 50S ribosomal protein L3 [Neisseria lactamica 020-06] Length = 214 Score = 185 bits (469), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 104/212 (49%), Positives = 135/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ + L G + S F VGQLVDVTG + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLIEFALTEEKPVELKAGDEITVSMFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPGA NS ++VR S K Sbjct: 181 VRVDAERQLLLVKGAVPGA-VNSDVVVRPSVK 211 >gi|330814199|ref|YP_004358438.1| LSU ribosomal protein L3p (L3e) [Candidatus Pelagibacter sp. IMCC9063] gi|327487294|gb|AEA81699.1| LSU ribosomal protein L3p (L3e) [Candidatus Pelagibacter sp. IMCC9063] Length = 272 Score = 185 bits (469), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 97/211 (45%), Positives = 137/211 (64%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR G+V +K+GMT + G +PVTVL ++ ++V DK GY A+ VG G K Sbjct: 1 MRLGLVGKKIGMTQKFYESGEAVPVTVLQVEPGKIVEVIEKDKRGYSALLVGYGHIKSSK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++K M+GF++ ++ KK L E+RV+ ++ GS + + VD+ TIGKGF Sbjct: 61 LTKSMKGFYAKKSLEAKKFLKEYRVENTEEF-KAGSDVTLDILKDKKYVDIRSKTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVS+SHRSHGSTG RQDPG+VFK KKMAG MG T++ LE+V Sbjct: 120 AGVMKRWNFGGLRATHGVSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDKFRTMQGLEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D L+ ++G VPG+ KN+++ + ++ K Sbjct: 180 EADLVNNLLYLRGSVPGS-KNAYVEITEAVK 209 >gi|317123097|ref|YP_004103100.1| 50S ribosomal protein L3P [Thermaerobacter marianensis DSM 12885] gi|315593077|gb|ADU52373.1| LSU ribosomal protein L3P [Thermaerobacter marianensis DSM 12885] Length = 217 Score = 185 bits (469), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 102/210 (48%), Positives = 133/210 (63%), Gaps = 3/210 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RKLGMT +++ EGR +PVTV+ C VV RT +++GY AVQ+G GE K Sbjct: 1 MGVGLLGRKLGMTQIFDDEGRAVPVTVIQAGPCVVVQTRTEERDGYRAVQLGFGEVKPSK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP-VGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KPM G F V+P K L EFR++ DD+ LP VG + F G+ VDVTG + GKG Sbjct: 61 VNKPMAGHFRKAGVAPVKVLREFRLEGDDEPLPEVGQQLTVELFKAGEYVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G + RH FG +HG S HR GS G P RVFK ++MAGR G RVTV+ L+V Sbjct: 121 FLGPIARHGFGRGPMSHG-SKYHRGPGSLGPSTYPARVFKGRRMAGRTGAERVTVRGLQV 179 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 V VD +R L+LVKG VPG + S + +R + Sbjct: 180 VRVDPERNLLLVKGAVPGP-RGSVVAIRKT 208 >gi|119478132|ref|ZP_01618211.1| 50S ribosomal protein L3 [marine gamma proteobacterium HTCC2143] gi|119448838|gb|EAW30081.1| 50S ribosomal protein L3 [marine gamma proteobacterium HTCC2143] Length = 214 Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 103/211 (48%), Positives = 134/211 (63%), Gaps = 1/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT V+ +G IPVTV+ + +V +T + +GY A QV AG K Sbjct: 1 MTIGLVGRKSGMTRVFTDDGISIPVTVIEVSPNRVTSVKTGESDGYSAFQVTAGARKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK G F+ +V + L+EFR++ D+ VG+ + S F VGQ VDVTG + GKGF Sbjct: 61 VSKAEAGQFAKASVEAGRGLWEFRLEDGDEAPVVGAELTVSTFEVGQKVDVTGQSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF ATHG SISHRS+GS G Q PGRVFK KKM+G MG RVT++ LEVV Sbjct: 121 QGGIKRWNFQMQDATHGNSISHRSNGSIGQCQTPGRVFKGKKMSGHMGAERVTIQTLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD+ R L+L+KG +PGA ++VR + K Sbjct: 181 RVDEARNLLLIKGAIPGAPGGD-VIVRPATK 210 >gi|261400052|ref|ZP_05986177.1| 50S ribosomal protein L3 [Neisseria lactamica ATCC 23970] gi|269210278|gb|EEZ76733.1| 50S ribosomal protein L3 [Neisseria lactamica ATCC 23970] Length = 214 Score = 184 bits (468), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 105/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPGA NS I+VR S K Sbjct: 181 VRVDAERQLLLVKGAVPGA-VNSNIVVRPSVK 211 >gi|90409445|ref|ZP_01217509.1| ribosomal protein L3 [Psychromonas sp. CNPT3] gi|90309447|gb|EAS37668.1| ribosomal protein L3 [Psychromonas sp. CNPT3] Length = 212 Score = 184 bits (468), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 103/213 (48%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTVL +V +TLD +GY A+QV G K Sbjct: 1 MTIGLVGRKIGMTRIFTEDGVSIPVTVLECTPNRVTQVKTLDTDGYQAIQVTTGAKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP G F+ V + L+EFR+++++ + VG+ S F VDVTG + GKG Sbjct: 61 VTKPEAGHFAKAGVEAGRGLWEFRLEENEGTDIKVGAELSVELFNDITKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHRS+GS G Q PGRVFK KKM+G MG RVT +NLEV Sbjct: 121 FQGGIKRWNFSMQDATHGNSLSHRSNGSIGMCQTPGRVFKGKKMSGHMGAERVTTQNLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD KR L+LVKG VPGA KN + ++ + K+ Sbjct: 181 VRVDVKRNLLLVKGAVPGA-KNGNVFIKPAVKA 212 >gi|167838212|ref|ZP_02465071.1| 50S ribosomal protein L3 [Burkholderia thailandensis MSMB43] Length = 219 Score = 184 bits (468), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 97/200 (48%), Positives = 127/200 (63%), Gaps = 1/200 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR+ D L G+V P F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVQAGEILKEFRIAADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAK 199 +D R L+LVKG VPGAK Sbjct: 181 ARIDADRKLLLVKGAVPGAK 200 >gi|255020765|ref|ZP_05292823.1| LSU ribosomal protein L3p (L3e) [Acidithiobacillus caldus ATCC 51756] gi|254969761|gb|EET27265.1| LSU ribosomal protein L3p (L3e) [Acidithiobacillus caldus ATCC 51756] Length = 210 Score = 184 bits (468), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 96/212 (45%), Positives = 138/212 (65%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT + + +GR +PVTV+ +D + +T +++GY AVQV GE + + Sbjct: 1 MAIGLVGRKIGMTRIRSEDGRVVPVTVIQVDTNTITQIKTQERDGYTAVQVSTGERRPQR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ + G + P + L EFR +D +G F GQ VDVTG++ GKGF Sbjct: 61 VTSALAGHYRRAGAQPGRVLREFRDPGLEDP-QLGQEIGLDIFNTGQRVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GA+KRHNF RA+HG S+SHR+ GS GCRQ PGRVFK KKMAG++G +VT NLE+V Sbjct: 120 AGAIKRHNFRSNRASHGNSLSHRAPGSIGCRQTPGRVFKGKKMAGQLGNEQVTTLNLELV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D +R L++VKG VPGA + ++VR + ++ Sbjct: 180 RIDAERRLLMVKGAVPGANQGD-VIVRPAVRA 210 >gi|296313365|ref|ZP_06863306.1| 50S ribosomal protein L3 [Neisseria polysaccharea ATCC 43768] gi|296840076|gb|EFH24014.1| 50S ribosomal protein L3 [Neisseria polysaccharea ATCC 43768] Length = 214 Score = 184 bits (468), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 104/212 (49%), Positives = 135/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY+AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYIAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPGA NS ++VR S K Sbjct: 181 VRVDAERQLLLVKGAVPGA-VNSDVVVRPSVK 211 >gi|161870915|ref|YP_001600095.1| 50S ribosomal protein L3 [Neisseria meningitidis 053442] gi|189042853|sp|A9M3W6|RL3_NEIM0 RecName: Full=50S ribosomal protein L3 gi|161596468|gb|ABX74128.1| 50S ribosomal protein L3 [Neisseria meningitidis 053442] Length = 214 Score = 184 bits (468), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 104/212 (49%), Positives = 135/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG++ GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGISKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPGA NS ++VR S K Sbjct: 181 VRVDAERQLLLVKGAVPGA-VNSDVVVRPSVK 211 >gi|315605899|ref|ZP_07880930.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 180 str. F0310] gi|315312181|gb|EFU60267.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 180 str. F0310] Length = 221 Score = 184 bits (468), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 93/209 (44%), Positives = 133/209 (63%), Gaps = 2/209 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RK+GMT V++ +G +P+TV+ + V RT++ +GY A+Q+G GE + V+KP Sbjct: 15 LLGRKIGMTQVWDADGHLVPLTVVQVGTNVVTQVRTVEVDGYSAIQLGFGEIDSRKVTKP 74 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + G F V+P++ L E R + D +G + F GQ VDV+G T GKGF+G M Sbjct: 75 LLGHFEKAGVAPRRHLAEVRTSEHDSY-ELGQELDATAFEAGQSVDVSGTTKGKGFAGVM 133 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH F G+ A+HG +HR GS G PGR+FK +MAGRMGGNR TV+NL + +VD Sbjct: 134 KRHGFAGVSASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGGNRRTVQNLTIQAVDA 193 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+ G +PG KN +LVR S K A Sbjct: 194 EKGLLLISGAIPG-PKNGVVLVRSSVKGA 221 >gi|170723906|ref|YP_001751594.1| 50S ribosomal protein L3 [Pseudomonas putida W619] gi|226730552|sp|B1JDW4|RL3_PSEPW RecName: Full=50S ribosomal protein L3 gi|169761909|gb|ACA75225.1| ribosomal protein L3 [Pseudomonas putida W619] Length = 211 Score = 184 bits (467), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 101/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + ++EFR+++ + G FT GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRGVWEFRLEEGE--FQAGDSIKAELFTAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA ++VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGD-VVVRPAVKA 209 >gi|239997926|ref|ZP_04717850.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae 35/02] gi|240017545|ref|ZP_04724085.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae FA6140] gi|240113966|ref|ZP_04728456.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae MS11] gi|240116700|ref|ZP_04730762.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID18] gi|240118922|ref|ZP_04732984.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID1] gi|240124671|ref|ZP_04737557.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-92-679] gi|254494721|ref|ZP_05107892.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae 1291] gi|268593776|ref|ZP_06127943.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae 35/02] gi|268600030|ref|ZP_06134197.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae MS11] gi|268602368|ref|ZP_06136535.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID18] gi|268604631|ref|ZP_06138798.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID1] gi|268683245|ref|ZP_06150107.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-92-679] gi|226513761|gb|EEH63106.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae 1291] gi|268547165|gb|EEZ42583.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae 35/02] gi|268584161|gb|EEZ48837.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae MS11] gi|268586499|gb|EEZ51175.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID18] gi|268588762|gb|EEZ53438.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID1] gi|268623529|gb|EEZ55929.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-92-679] Length = 214 Score = 184 bits (467), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGVAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPGA NS ++VR S K Sbjct: 181 VRVDAERQLLLVKGAVPGA-VNSDVVVRPSVK 211 >gi|293190259|ref|ZP_06608755.1| 50S ribosomal protein L3 [Actinomyces odontolyticus F0309] gi|292821075|gb|EFF80028.1| 50S ribosomal protein L3 [Actinomyces odontolyticus F0309] Length = 221 Score = 184 bits (467), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 93/209 (44%), Positives = 133/209 (63%), Gaps = 2/209 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RKLGMT V++ +G +P+TV+ + V RT + +GY A+Q+G GE + V+KP Sbjct: 15 LLGRKLGMTQVWDADGHLVPLTVVQVGTNVVTQVRTDEVDGYSAIQLGFGEIDSRKVTKP 74 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 ++G F V+P++ L E R + D +G + F G+ VDV+G T GKGF+G M Sbjct: 75 LQGHFEKAGVAPRRHLVEVRTSEQDSF-ELGQELDATTFEAGEGVDVSGTTKGKGFAGVM 133 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH F G+ A+HG +HR GS G PGR+FK +MAGRMGGNR TV+NL + +VD Sbjct: 134 KRHGFAGVSASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGGNRRTVQNLTIQAVDA 193 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+ G +PG KN +LVR S K A Sbjct: 194 EKGLLLISGAIPGP-KNGVVLVRSSVKGA 221 >gi|313816574|gb|EFS54288.1| 50S ribosomal protein L3 [Propionibacterium acnes HL059PA1] gi|315097985|gb|EFT69961.1| 50S ribosomal protein L3 [Propionibacterium acnes HL059PA2] Length = 223 Score = 184 bits (467), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 101/210 (48%), Positives = 130/210 (61%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ KLGMT +++ R +PVTV+ C V RT + +GY AVQ+G G K KNV+K Sbjct: 9 GVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKNVTK 68 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ L E R D +G + F+ VDVT + GKG +G Sbjct: 69 PEAGHFEKAGVTPRRHLVELRTA-DASEYALGQEIAADVFSESDFVDVTATSKGKGTAGV 127 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH FGGLRATHGV HRS GS G PG+V K +MAGRMG RVTV+NL+V SVD Sbjct: 128 MKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQNLQVHSVD 187 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +RG++LV+G VPG K S ++VR + K A Sbjct: 188 AERGIMLVRGAVPG-PKGSLLVVRSAAKKA 216 >gi|261364855|ref|ZP_05977738.1| 50S ribosomal protein L3 [Neisseria mucosa ATCC 25996] gi|261378041|ref|ZP_05982614.1| 50S ribosomal protein L3 [Neisseria cinerea ATCC 14685] gi|298370591|ref|ZP_06981906.1| 50S ribosomal protein L3 [Neisseria sp. oral taxon 014 str. F0314] gi|269145491|gb|EEZ71909.1| 50S ribosomal protein L3 [Neisseria cinerea ATCC 14685] gi|288566904|gb|EFC88464.1| 50S ribosomal protein L3 [Neisseria mucosa ATCC 25996] gi|298281201|gb|EFI22691.1| 50S ribosomal protein L3 [Neisseria sp. oral taxon 014 str. F0314] Length = 214 Score = 184 bits (467), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDADGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPGA NS ++VR S K Sbjct: 181 VRVDAERQLLLVKGAVPGA-VNSDVVVRPSVK 211 >gi|288574662|ref|ZP_06393019.1| ribosomal protein L3 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570403|gb|EFC91960.1| ribosomal protein L3 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 208 Score = 184 bits (467), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 95/206 (46%), Positives = 133/206 (64%), Gaps = 2/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT +YN G+ +PVTV+ C V+ RT +KNGY A+ +G G+ K + Sbjct: 1 MSLGILGQKLGMTQIYNENGQAVPVTVVEAGPCPVLAVRTEEKNGYDAILLGFGKVKPRK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++GFF K+ L EFR+ D VG+ + F G+ VD TG++ GKGF Sbjct: 61 VTKPLKGFFDKAQSEAKRWLKEFRISNASDY-EVGNAVDVTIFEAGEKVDATGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR+NFGG A+HGVS +HR S+G P VFK K M G++G +VTVKNL VV Sbjct: 120 AGVIKRYNFGGAPASHGVSKTHRKPNSSGASSYPSHVFKGKTMPGQLGNEQVTVKNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 +VD + L+LVKG +PGA KN +L+ Sbjct: 180 AVDVENNLVLVKGAIPGA-KNGLVLL 204 >gi|15676069|ref|NP_273200.1| 50S ribosomal protein L3 [Neisseria meningitidis MC58] gi|59802160|ref|YP_208872.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae FA 1090] gi|121634016|ref|YP_974261.1| 50S ribosomal protein L3 [Neisseria meningitidis FAM18] gi|218767168|ref|YP_002341680.1| 50S ribosomal protein L3 [Neisseria meningitidis Z2491] gi|240015096|ref|ZP_04722009.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae DGI18] gi|240081688|ref|ZP_04726231.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae FA19] gi|240122168|ref|ZP_04735130.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID24-1] gi|240124460|ref|ZP_04737416.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID332] gi|240129136|ref|ZP_04741797.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-93-1035] gi|254805814|ref|YP_003084035.1| 50S ribosomal protein L3 [Neisseria meningitidis alpha14] gi|260439541|ref|ZP_05793357.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae DGI2] gi|268597785|ref|ZP_06131952.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae FA19] gi|268683089|ref|ZP_06149951.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID332] gi|268687519|ref|ZP_06154381.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-93-1035] gi|291042777|ref|ZP_06568518.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae DGI2] gi|293398202|ref|ZP_06642407.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae F62] gi|304388943|ref|ZP_07370990.1| 50S ribosomal protein L3 [Neisseria meningitidis ATCC 13091] gi|42559565|sp|P60443|RL3_NEIMA RecName: Full=50S ribosomal protein L3 gi|42559566|sp|P60444|RL3_NEIMB RecName: Full=50S ribosomal protein L3 gi|81311149|sp|Q5F5S7|RL3_NEIG1 RecName: Full=50S ribosomal protein L3 gi|166233169|sp|A1KRH3|RL3_NEIMF RecName: Full=50S ribosomal protein L3 gi|7225360|gb|AAF40600.1| 50S ribosomal protein L3 [Neisseria meningitidis MC58] gi|59719055|gb|AAW90460.1| putative 50S ribosomal protein L3 [Neisseria gonorrhoeae FA 1090] gi|120865722|emb|CAM09451.1| 50S ribosomal protein L3 [Neisseria meningitidis FAM18] gi|121051176|emb|CAM07447.1| 50S ribosomal protein L3 [Neisseria meningitidis Z2491] gi|254669356|emb|CBA08445.1| 50S ribosomal protein L3 [Neisseria meningitidis alpha14] gi|268551573|gb|EEZ46592.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae FA19] gi|268623373|gb|EEZ55773.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID332] gi|268627803|gb|EEZ60203.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-93-1035] gi|291013211|gb|EFE05177.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae DGI2] gi|291611465|gb|EFF40535.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae F62] gi|304337077|gb|EFM03264.1| 50S ribosomal protein L3 [Neisseria meningitidis ATCC 13091] gi|308388358|gb|ADO30678.1| 50S ribosomal protein L3 [Neisseria meningitidis alpha710] gi|316985672|gb|EFV64618.1| ribosomal L3 family protein [Neisseria meningitidis H44/76] gi|319411374|emb|CBY91785.1| 50S ribosomal protein L3 [Neisseria meningitidis WUE 2594] gi|325129061|gb|EGC51910.1| ribosomal protein L3 [Neisseria meningitidis N1568] gi|325131084|gb|EGC53807.1| ribosomal protein L3 [Neisseria meningitidis OX99.30304] gi|325133054|gb|EGC55726.1| ribosomal protein L3 [Neisseria meningitidis M6190] gi|325135148|gb|EGC57774.1| ribosomal protein L3 [Neisseria meningitidis M13399] gi|325137200|gb|EGC59795.1| ribosomal protein L3 [Neisseria meningitidis M0579] gi|325139032|gb|EGC61578.1| ribosomal protein L3 [Neisseria meningitidis ES14902] gi|325141156|gb|EGC63656.1| ribosomal protein L3 [Neisseria meningitidis CU385] gi|325143232|gb|EGC65571.1| ribosomal protein L3 [Neisseria meningitidis 961-5945] gi|325145339|gb|EGC67616.1| ribosomal protein L3 [Neisseria meningitidis M01-240013] gi|325197429|gb|ADY92885.1| ribosomal protein L3 [Neisseria meningitidis G2136] gi|325199355|gb|ADY94810.1| ribosomal protein L3 [Neisseria meningitidis H44/76] gi|325203023|gb|ADY98477.1| ribosomal protein L3 [Neisseria meningitidis M01-240149] gi|325203262|gb|ADY98715.1| ribosomal protein L3 [Neisseria meningitidis M01-240355] gi|325205235|gb|ADZ00688.1| ribosomal protein L3 [Neisseria meningitidis M04-240196] gi|325207178|gb|ADZ02630.1| ribosomal protein L3 [Neisseria meningitidis NZ-05/33] Length = 214 Score = 184 bits (466), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPGA NS ++VR S K Sbjct: 181 VRVDAERQLLLVKGAVPGA-VNSDVVVRPSVK 211 >gi|46109318|ref|XP_381717.1| hypothetical protein FG01541.1 [Gibberella zeae PH-1] Length = 332 Score = 184 bits (466), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 97/200 (48%), Positives = 133/200 (66%), Gaps = 2/200 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSGV+A K GMT ++ + R+P TVL LD QVV ++T +KNGY AVQ+G G +N Sbjct: 75 LRSGVLAVKKGMTSMF-VGKIRVPCTVLQLDQVQVVANKTREKNGYWAVQIGQGSRDGRN 133 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ P+ G++ + ++PK +L EF+V+ D LLPVG P +F GQ VDV G + G GF Sbjct: 134 VTSPLLGYYEAKGIAPKAELAEFKVRDKDGLLPVGVQILPDWFKKGQYVDVKGRSRGMGF 193 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179 +G MKRH F G A+HG S +HR+ G+TG Q G RV KKM GRMG VTV+NL+V Sbjct: 194 AGGMKRHGFSGQEASHGNSKNHRTIGTTGPSQGSGSRVMPGKKMPGRMGNEFVTVQNLKV 253 Query: 180 VSVDDKRGLILVKGCVPGAK 199 + VD++ G++LV G + G K Sbjct: 254 MMVDNELGIVLVGGPIAGPK 273 >gi|261380559|ref|ZP_05985132.1| 50S ribosomal protein L3 [Neisseria subflava NJ9703] gi|284796527|gb|EFC51874.1| 50S ribosomal protein L3 [Neisseria subflava NJ9703] Length = 214 Score = 184 bits (466), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 104/212 (49%), Positives = 136/212 (64%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ +V + L EF + ++ L VG + S F VGQLVDVTG + GKG Sbjct: 61 VNKTEAGHFAKASVEAGRGLVEFALTEEKLAELKVGDEITVSMFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPG+ NS ++VR S K Sbjct: 181 VRVDAERQLLLVKGAVPGS-VNSDVVVRPSVK 211 >gi|289424800|ref|ZP_06426582.1| 50S ribosomal protein L3 [Propionibacterium acnes SK187] gi|289154763|gb|EFD03446.1| 50S ribosomal protein L3 [Propionibacterium acnes SK187] gi|313763238|gb|EFS34602.1| 50S ribosomal protein L3 [Propionibacterium acnes HL013PA1] gi|313793258|gb|EFS41316.1| 50S ribosomal protein L3 [Propionibacterium acnes HL110PA1] gi|313801098|gb|EFS42366.1| 50S ribosomal protein L3 [Propionibacterium acnes HL110PA2] gi|313828364|gb|EFS66078.1| 50S ribosomal protein L3 [Propionibacterium acnes HL063PA2] gi|313837949|gb|EFS75663.1| 50S ribosomal protein L3 [Propionibacterium acnes HL086PA1] gi|314914332|gb|EFS78163.1| 50S ribosomal protein L3 [Propionibacterium acnes HL005PA4] gi|314917652|gb|EFS81483.1| 50S ribosomal protein L3 [Propionibacterium acnes HL050PA1] gi|314919616|gb|EFS83447.1| 50S ribosomal protein L3 [Propionibacterium acnes HL050PA3] gi|314930207|gb|EFS94038.1| 50S ribosomal protein L3 [Propionibacterium acnes HL067PA1] gi|314957186|gb|EFT01290.1| 50S ribosomal protein L3 [Propionibacterium acnes HL027PA1] gi|314957762|gb|EFT01865.1| 50S ribosomal protein L3 [Propionibacterium acnes HL002PA1] gi|314963542|gb|EFT07642.1| 50S ribosomal protein L3 [Propionibacterium acnes HL082PA1] gi|314969875|gb|EFT13973.1| 50S ribosomal protein L3 [Propionibacterium acnes HL037PA1] gi|315077165|gb|EFT49232.1| 50S ribosomal protein L3 [Propionibacterium acnes HL053PA2] gi|315100628|gb|EFT72604.1| 50S ribosomal protein L3 [Propionibacterium acnes HL046PA1] gi|315109232|gb|EFT81208.1| 50S ribosomal protein L3 [Propionibacterium acnes HL030PA2] gi|327451421|gb|EGE98075.1| 50S ribosomal protein L3 [Propionibacterium acnes HL087PA3] gi|327451604|gb|EGE98258.1| 50S ribosomal protein L3 [Propionibacterium acnes HL092PA1] gi|327451891|gb|EGE98545.1| 50S ribosomal protein L3 [Propionibacterium acnes HL083PA2] gi|328752105|gb|EGF65721.1| 50S ribosomal protein L3 [Propionibacterium acnes HL087PA1] gi|328755499|gb|EGF69115.1| 50S ribosomal protein L3 [Propionibacterium acnes HL025PA2] Length = 223 Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 101/210 (48%), Positives = 130/210 (61%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ KLGMT +++ R +PVTV+ C V RT + +GY AVQ+G G K KNV+K Sbjct: 9 GVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKNVTK 68 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ L E R D +G + F+ VDVT + GKG +G Sbjct: 69 PEAGHFEKAGVTPRRHLVELRTA-DASEYTLGQEIAADVFSESDFVDVTATSKGKGTAGV 127 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH FGGLRATHGV HRS GS G PG+V K +MAGRMG RVTV+NL+V SVD Sbjct: 128 MKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQNLQVHSVD 187 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +RG++LV+G VPG K S ++VR + K A Sbjct: 188 AERGIMLVRGAVPG-PKGSLLVVRSAAKKA 216 >gi|254670741|emb|CBA06972.1| 50S ribosomal protein L3 [Neisseria meningitidis alpha153] gi|261391678|emb|CAX49127.1| 50S ribosomal protein L3 [Neisseria meningitidis 8013] Length = 214 Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG Sbjct: 61 VNKTEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPGA NS ++VR S K Sbjct: 181 VRVDAERQLLLVKGAVPGA-VNSDVVVRPSVK 211 >gi|241759650|ref|ZP_04757751.1| 50S ribosomal protein L3 [Neisseria flavescens SK114] gi|241320022|gb|EER56403.1| 50S ribosomal protein L3 [Neisseria flavescens SK114] Length = 214 Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 104/212 (49%), Positives = 135/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG Sbjct: 61 VNKTEAGHFAKAGVEAGRGLVEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG RA+HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 121 FSGTIKRHNFGAQRASHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPG+ NS ++VR S K Sbjct: 181 VRVDAERQLLLVKGAVPGS-VNSDVVVRPSVK 211 >gi|282855208|ref|ZP_06264540.1| 50S ribosomal protein L3 [Propionibacterium acnes J139] gi|282581796|gb|EFB87181.1| 50S ribosomal protein L3 [Propionibacterium acnes J139] gi|314924185|gb|EFS88016.1| 50S ribosomal protein L3 [Propionibacterium acnes HL001PA1] gi|314965095|gb|EFT09194.1| 50S ribosomal protein L3 [Propionibacterium acnes HL082PA2] gi|314982251|gb|EFT26344.1| 50S ribosomal protein L3 [Propionibacterium acnes HL110PA3] gi|315090438|gb|EFT62414.1| 50S ribosomal protein L3 [Propionibacterium acnes HL110PA4] gi|315093673|gb|EFT65649.1| 50S ribosomal protein L3 [Propionibacterium acnes HL060PA1] gi|315103967|gb|EFT75943.1| 50S ribosomal protein L3 [Propionibacterium acnes HL050PA2] gi|327326712|gb|EGE68498.1| 50S ribosomal protein L3 [Propionibacterium acnes HL103PA1] Length = 223 Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 101/210 (48%), Positives = 130/210 (61%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ KLGMT +++ R +PVTV+ C V RT + +GY AVQ+G G K K V+K Sbjct: 9 GVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKKVTK 68 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ L E R D +G + F+ VDVTG + GKG +G Sbjct: 69 PEAGHFEKAGVTPRRHLVELRTA-DASEYTLGQEIAADVFSESDFVDVTGTSKGKGTAGV 127 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH FGGLRATHGV HRS GS G PG+V K +MAGRMG RVTV+NL+V SVD Sbjct: 128 MKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQNLQVHSVD 187 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +RG++LV+G VPG K S ++VR + K A Sbjct: 188 AERGIMLVRGAVPGP-KGSLLVVRSAAKKA 216 >gi|289623849|ref|ZP_06456803.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330869431|gb|EGH04140.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 211 Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 101/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ +++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIESNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR+++ D G + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + ++VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209 >gi|319942173|ref|ZP_08016489.1| 50S ribosomal protein L3 [Sutterella wadsworthensis 3_1_45B] gi|319804226|gb|EFW01118.1| 50S ribosomal protein L3 [Sutterella wadsworthensis 3_1_45B] Length = 214 Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 102/211 (48%), Positives = 136/211 (64%), Gaps = 4/211 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT ++ +G +PVTVL + N +V + +T D +GY AVQV G K VSK Sbjct: 6 GLVGRKIGMTRIFTDDGVSVPVTVLDVSNNRVTMVKTQDTDGYTAVQVAFGTKKPSRVSK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRV--QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 P+ G F+ V L EFR+ +K + P G S FT GQ VDVTG TIGKGF+ Sbjct: 66 PLAGQFAKAGVEAACTLKEFRIDAEKAAEFKP-GQTISVEIFTEGQKVDVTGTTIGKGFA 124 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 GA+KRH+F RA+HG S++ R+ GS G RQDPGRVF K+MAG +G + T +NL V Sbjct: 125 GAIKRHHFSSNRASHGNSVTTRAPGSIGNRQDPGRVFPGKRMAGHLGDVQRTTQNLVVAR 184 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LV+G VPGA K ++VR + K+ Sbjct: 185 VDKERQLLLVRGAVPGA-KGGEVIVRPAVKA 214 >gi|227538718|ref|ZP_03968767.1| ribosomal protein L3 [Sphingobacterium spiritivorum ATCC 33300] gi|300770251|ref|ZP_07080130.1| 50S ribosomal protein L3 [Sphingobacterium spiritivorum ATCC 33861] gi|227241637|gb|EEI91652.1| ribosomal protein L3 [Sphingobacterium spiritivorum ATCC 33300] gi|300762727|gb|EFK59544.1| 50S ribosomal protein L3 [Sphingobacterium spiritivorum ATCC 33861] Length = 205 Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 99/205 (48%), Positives = 133/205 (64%), Gaps = 4/205 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +YN EG+ IP TV+ C V RT DK+GY AVQ+G GEAK KN + Sbjct: 2 SGIIGKKVGMTSLYNEEGKNIPCTVIEAGPCVVTQIRTEDKDGYSAVQLGFGEAKEKNTT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 ++G F+ N +PK+KL EF+ D+ L G V + F G+ VDV G + GKGF G Sbjct: 62 ASLKGHFAKANTTPKRKLVEFKTFPDEKQL--GDVVDVTIFEEGEYVDVVGTSKGKGFQG 119 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 MKRH FGG+ ATHG R+ GS G P RVFK +MAGR GG+RV V+NL+V+ Sbjct: 120 VMKRHGFGGVGGATHGQHNRLRAPGSLGASSWPSRVFKGMRMAGRTGGDRVKVQNLQVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 V ++ LI+V G +PGA K S+++V Sbjct: 180 VYAEQNLIVVSGSIPGA-KGSYVIV 203 >gi|255067458|ref|ZP_05319313.1| 50S ribosomal protein L3 [Neisseria sicca ATCC 29256] gi|255048253|gb|EET43717.1| 50S ribosomal protein L3 [Neisseria sicca ATCC 29256] Length = 238 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 25 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 84 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG Sbjct: 85 VNKAEAGHFAKAGVEAGRGLIEFALAEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 144 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 145 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 204 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPGA NS ++VR S K Sbjct: 205 VRVDAERQLLLVKGAVPGA-VNSDVVVRPSVK 235 >gi|154507864|ref|ZP_02043506.1| hypothetical protein ACTODO_00346 [Actinomyces odontolyticus ATCC 17982] gi|153797498|gb|EDN79918.1| hypothetical protein ACTODO_00346 [Actinomyces odontolyticus ATCC 17982] Length = 221 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 93/209 (44%), Positives = 133/209 (63%), Gaps = 2/209 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RKLGMT V++ +G +P+TV+ + V RT + +GY A+Q+G GE + V+KP Sbjct: 15 LLGRKLGMTQVWDADGHLVPLTVVQVGTNVVTQVRTDEVDGYSAIQLGFGEIDSRKVTKP 74 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 ++G F V+P++ L E R + D +G + F G+ VDV+G T GKGF+G M Sbjct: 75 LQGHFEKAGVAPRRHLVEVRTSEHDSY-ELGQELDATTFEAGEGVDVSGTTKGKGFAGVM 133 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH F G+ A+HG +HR GS G PGR+FK +MAGRMGGNR TV+NL + +VD Sbjct: 134 KRHGFAGVSASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGGNRRTVQNLTIQAVDA 193 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+ G +PG KN +LVR S K A Sbjct: 194 EKGLLLISGAIPGP-KNGVVLVRSSVKGA 221 >gi|330962525|gb|EGH62785.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 211 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 101/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR+++ D G + + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDLINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + ++VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209 >gi|70732882|ref|YP_262650.1| 50S ribosomal protein L3 [Pseudomonas fluorescens Pf-5] gi|109893539|sp|Q4K533|RL3_PSEF5 RecName: Full=50S ribosomal protein L3 gi|68347181|gb|AAY94787.1| ribosomal protein L3 [Pseudomonas fluorescens Pf-5] Length = 211 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 100/212 (47%), Positives = 136/212 (64%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + ++EFR+++ + G + + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRGVWEFRLEEGE--YQAGDLINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + ++VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209 >gi|294341610|emb|CAZ90027.1| 50S ribosomal protein L3 [Thiomonas sp. 3As] Length = 215 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 101/212 (47%), Positives = 136/212 (64%), Gaps = 4/212 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT V+ +G I VTVL +V RT D +GY AVQV G K ++K Sbjct: 2 GLVTRKVGMTRVFTDDGASIAVTVLDASGNRVSQVRTQDVDGYSAVQVAYGSRKPSRLTK 61 Query: 64 PMRGFFSSVNVSPKKKLFEFRV--QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 G + V P + L EF + +K D P G+ S F VGQ+VD G++IGKGF+ Sbjct: 62 GQAGHLAKAGVEPAEILKEFDLPAEKAADYAP-GATVPASLFQVGQMVDAQGVSIGKGFA 120 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G++KRHNF RA+HG S++ R+ GS G QDPGRVF K+MAG+MG VTV+NLEVV Sbjct: 121 GSIKRHNFSSNRASHGNSVTTRAPGSIGMAQDPGRVFPGKRMAGQMGNETVTVQNLEVVR 180 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +D+ R LILVKG VPG+ ++ ++ +R + KSA Sbjct: 181 IDEARQLILVKGAVPGS-RSGFVFLRPAVKSA 211 >gi|296113797|ref|YP_003627735.1| 50S ribosomal protein L3 [Moraxella catarrhalis RH4] gi|295921491|gb|ADG61842.1| 50S ribosomal protein L3 [Moraxella catarrhalis RH4] gi|326562142|gb|EGE12470.1| 50S ribosomal protein L3 [Moraxella catarrhalis 7169] gi|326564493|gb|EGE14719.1| 50S ribosomal protein L3 [Moraxella catarrhalis 46P47B1] gi|326565676|gb|EGE15839.1| 50S ribosomal protein L3 [Moraxella catarrhalis 12P80B1] gi|326566245|gb|EGE16397.1| 50S ribosomal protein L3 [Moraxella catarrhalis 103P14B1] gi|326567103|gb|EGE17225.1| 50S ribosomal protein L3 [Moraxella catarrhalis BC1] gi|326568367|gb|EGE18447.1| 50S ribosomal protein L3 [Moraxella catarrhalis BC7] gi|326572268|gb|EGE22263.1| 50S ribosomal protein L3 [Moraxella catarrhalis BC8] gi|326574610|gb|EGE24550.1| 50S ribosomal protein L3 [Moraxella catarrhalis O35E] gi|326574866|gb|EGE24796.1| 50S ribosomal protein L3 [Moraxella catarrhalis 101P30B1] gi|326576190|gb|EGE26105.1| 50S ribosomal protein L3 [Moraxella catarrhalis CO72] Length = 212 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 137/213 (64%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V +K GMT V+ G IPVTV+ +D ++ +T+D +GY A+Q+ GE + Sbjct: 1 MAIGLVGKKCGMTRVFTEAGVSIPVTVVEVDANRISQIKTVDTDGYNAIQITTGERRDSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + ++EFR ++ D + +G F VGQLVDVTG + GKG Sbjct: 61 VTAAQKGHFAKAGVAAGRGVWEFRAEESDLEGREIGGNILADIFEVGQLVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KRHNF ATHG S+SHR GSTG Q PGRVFK KKM G+MG RVTV+ LE+ Sbjct: 121 FQGGVKRHNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMPGQMGNKRVTVQGLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VSVD ++G++++KG VPGA ++VR S K+ Sbjct: 181 VSVDAEKGVLVIKGAVPGANGGD-VIVRPSVKA 212 >gi|145606142|ref|XP_365809.2| hypothetical protein MGG_02511 [Magnaporthe oryzae 70-15] gi|145013870|gb|EDJ98511.1| hypothetical protein MGG_02511 [Magnaporthe oryzae 70-15] Length = 396 Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 96/200 (48%), Positives = 126/200 (63%), Gaps = 1/200 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+GVVA K GMT +++ G RIP TVL LD+ QV++++T + GY AVQVGA + Sbjct: 105 VRAGVVAIKKGMTALFSRRGTRIPCTVLQLDSVQVLLNKTRENAGYFAVQVGAVPKRPST 164 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 P G+F + V PK+ + EFRV+ + LLPVG P +F VGQ VDV G + G GF Sbjct: 165 ALAPQLGYFEAKGVEPKQHVAEFRVRNEQGLLPVGVQLQPDWFHVGQWVDVRGTSRGMGF 224 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179 G MKRH F G +HG S++HR+ GS G Q G RV KKM GRMGG T +NL V Sbjct: 225 EGGMKRHGFSGQNKSHGNSLNHRTGGSVGPSQGSGSRVHPGKKMPGRMGGQSATAQNLSV 284 Query: 180 VSVDDKRGLILVKGCVPGAK 199 + VD+ G+++VKG V G K Sbjct: 285 LKVDNDLGIVVVKGAVAGPK 304 >gi|147799626|emb|CAN75145.1| hypothetical protein VITISV_033846 [Vitis vinifera] Length = 243 Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 97/192 (50%), Positives = 128/192 (66%), Gaps = 1/192 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G +A K GM+ +++ G R+P+TVL LD+ V +T +K G A+QVG G+ K K++ Sbjct: 7 RTGAIAVKCGMSALWDKWGARVPITVLWLDDNIVSQVKTFEKEGXNALQVGCGQKKAKHL 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F + V K+KL EF V +D LLPVG+ +F GQ VDVTG+T GKGF Sbjct: 67 TKPEVGHFRAQGVPLKRKLREFPVT-EDALLPVGTTIGVRHFVPGQYVDVTGITRGKGFQ 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR F G+ A+HG S+SHRS GSTG R PG+VFK KKM GRMGG + TVKN+ V Sbjct: 126 GGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGKQRTVKNVWVYK 185 Query: 182 VDDKRGLILVKG 193 +D R L+ V+G Sbjct: 186 IDPTRNLMWVRG 197 >gi|116199553|ref|XP_001225588.1| hypothetical protein CHGG_07932 [Chaetomium globosum CBS 148.51] gi|88179211|gb|EAQ86679.1| hypothetical protein CHGG_07932 [Chaetomium globosum CBS 148.51] Length = 380 Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 101/212 (47%), Positives = 134/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+GV+A K GMT G RI TVL LD Q V+++T ++GY AVQVG GE N Sbjct: 86 LRAGVLAVKKGMTVFMGRTGARIACTVLQLDRVQTVLNKTRARHGYWAVQVGMGERNPGN 145 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V P+ G++ + ++PK+ L EFRV+ LLPVG P +F VGQ VDV + G GF Sbjct: 146 VGAPLLGYYEAKGMAPKEVLAEFRVRDQSGLLPVGVQLMPDWFHVGQRVDVRSNSRGMGF 205 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179 +G MKRH F G A+HG S +HR+ GS G Q G RV KKM GRMG RVT++NL V Sbjct: 206 AGGMKRHGFSGQEASHGNSKNHRTIGSAGPSQGSGSRVLPGKKMPGRMGNQRVTIQNLPV 265 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 + D++ G+++VKGCV G K + I V+D+ K Sbjct: 266 LIADNELGILVVKGCVAGP-KGAVIQVQDACK 296 >gi|121997649|ref|YP_001002436.1| ribosomal protein L3 [Halorhodospira halophila SL1] gi|166233149|sp|A1WVC2|RL3_HALHL RecName: Full=50S ribosomal protein L3 gi|121589054|gb|ABM61634.1| LSU ribosomal protein L3P [Halorhodospira halophila SL1] Length = 216 Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 103/217 (47%), Positives = 134/217 (61%), Gaps = 6/217 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT V+ EG IPVTV+ D +V +T + +GY AVQV AG K + Sbjct: 1 MAIGIVGRKRGMTRVFTEEGGSIPVTVVEADPNRVTQVKTEESDGYRAVQVTAGRRKPQR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQK-----DDDLLPVGSVFSPSYFTVGQLVDVTGMT 115 V KP G F+ V + ++EFR+ K D+++ G F GQ VDVTG T Sbjct: 61 VRKPEAGHFARAGVEAGRGVWEFRLDKGQRASDEEMPETGGSIDVGGFEAGQKVDVTGTT 120 Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175 G+GF+G ++RHNF R THG S SHR GS G Q PGRVFK KKMAG+MG R T++ Sbjct: 121 KGRGFAGTVRRHNFRAQRNTHGNSKSHRVPGSIGQCQSPGRVFKGKKMAGQMGNRRATIQ 180 Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 NLEVV VD +R L+L++G VPGA S ++VR + K+ Sbjct: 181 NLEVVRVDSERNLLLIRGAVPGA-VGSDLIVRPASKA 216 >gi|328675407|gb|AEB28082.1| LSU ribosomal protein L3p (L3e) [Francisella cf. novicida 3523] Length = 210 Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 94/198 (47%), Positives = 128/198 (64%), Gaps = 1/198 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ +G IPVTV+ ++ +V +T + +GY A+QV G K N Sbjct: 1 MSLGLVGRKCGMTRIFTEDGVSIPVTVVQVEANKVTQVKTTETDGYNAIQVTTGFKKRSN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP G ++ V P + L+EF + + VG+ + F GQ VDV G++ GKGF Sbjct: 61 VNKPAAGHYAKAGVEPGRGLWEFTIDNASEY-EVGASIDATIFQAGQKVDVRGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRHNF ATHG S+SHR HGSTG Q PGRVFKNKKMAG +G VT+++LEVV Sbjct: 120 QGGVKRHNFATQDATHGNSLSHRVHGSTGQNQTPGRVFKNKKMAGHLGNENVTIQSLEVV 179 Query: 181 SVDDKRGLILVKGCVPGA 198 VD + GL+L+KG +PG+ Sbjct: 180 RVDAENGLLLLKGGIPGS 197 >gi|260779503|ref|ZP_05888393.1| LSU ribosomal protein L3p (L3e) [Vibrio coralliilyticus ATCC BAA-450] gi|260604312|gb|EEX30616.1| LSU ribosomal protein L3p (L3e) [Vibrio coralliilyticus ATCC BAA-450] Length = 209 Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 98/209 (46%), Positives = 134/209 (64%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ EG IPVTV+ ++ +V RTL+ +GY A+QV G K VSK Sbjct: 3 GLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVRTLETDGYAAIQVTTGAKKANRVSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF GA Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELTVELFNETKKVDVTGTSKGKGFQGA 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 VKRWNFSTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPGA + ++V+ + K+ Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|311109612|ref|YP_003982465.1| 50S ribosomal protein L3 [Achromobacter xylosoxidans A8] gi|310764301|gb|ADP19750.1| ribosomal protein L3 [Achromobacter xylosoxidans A8] Length = 229 Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 101/213 (47%), Positives = 133/213 (62%), Gaps = 3/213 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+V RK+GMT ++ EG IPVTVL + N +V ++L+ +GY A+QV G + V Sbjct: 12 RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQVKSLETDGYAAIQVAYGTRRASRV 71 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFS-PSYFTVGQLVDVTGMTIGKG 119 ++P G ++ L EFR+ GSV + S F GQ VDVTG TIGKG Sbjct: 72 AQPQTGHYAKAGAEAGSILKEFRLDPARAAEFAAGSVIAVESVFEAGQQVDVTGTTIGKG 131 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRHNFG RA+HG S SHR GS G QDPGR+F K+MAG +G TV+NL+V Sbjct: 132 FAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMAGHLGDVTRTVQNLDV 191 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +RGL+LVKG VPG + I+VR + K+ Sbjct: 192 VRVDVERGLLLVKGAVPG-HAGADIIVRPAIKA 223 >gi|330988282|gb|EGH86385.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. lachrymans str. M301315] Length = 211 Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 101/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEEADGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR+++ D G + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + ++VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209 >gi|255536154|ref|YP_003096525.1| LSU ribosomal protein L3p (L3e) [Flavobacteriaceae bacterium 3519-10] gi|255342350|gb|ACU08463.1| LSU ribosomal protein L3p (L3e) [Flavobacteriaceae bacterium 3519-10] Length = 208 Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 96/206 (46%), Positives = 136/206 (66%), Gaps = 3/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ +P TV+ C V+ RT++K+GY A Q+G + KNV Sbjct: 2 SGIIGKKIGMTSLFDENGKNMPCTVIQAGPCSVLQVRTIEKDGYKAAQLGFDDKSEKNVG 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K + G F +PK KL EF + D L VG F+ G+ VDVTG + GKGF G Sbjct: 62 KALIGHFKKAGSAPKAKLVEF-YHEFVDKLSVGDEVKVDLFSQGEFVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRHNFGG ++ATHG R+ GS G DP RVFK +MAGRMGG +VTV+NL+V+ Sbjct: 121 VVKRHNFGGVMQATHGQHNRLRAPGSIGAGSDPSRVFKGMRMAGRMGGKQVTVQNLQVLR 180 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 VD+++ L++VKG VPGA KNS++++R Sbjct: 181 VDEEQNLLVVKGAVPGA-KNSYVIIR 205 >gi|229592903|ref|YP_002875022.1| 50S ribosomal protein L3 [Pseudomonas fluorescens SBW25] gi|259709731|sp|C3K2X6|RL3_PSEFS RecName: Full=50S ribosomal protein L3 gi|229364769|emb|CAY52766.1| 50S ribosomal protein L3 [Pseudomonas fluorescens SBW25] Length = 211 Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 101/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR++ D G + + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEDGD--YQAGDLINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + ++VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209 >gi|77461300|ref|YP_350807.1| 50S ribosomal protein L3 [Pseudomonas fluorescens Pf0-1] gi|109893541|sp|Q3K5Y8|RL3_PSEPF RecName: Full=50S ribosomal protein L3 gi|77385303|gb|ABA76816.1| 50S ribosomal protein L3 [Pseudomonas fluorescens Pf0-1] Length = 211 Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 100/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKAGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR+++ + G + + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGE--YQAGDLINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + ++VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209 >gi|66047775|ref|YP_237616.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. syringae B728a] gi|257483185|ref|ZP_05637226.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289648942|ref|ZP_06480285.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. aesculi str. 2250] gi|289675488|ref|ZP_06496378.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. syringae FF5] gi|298489097|ref|ZP_07007119.1| LSU ribosomal protein L3p (L3e) [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|81307859|sp|Q4ZMP4|RL3_PSEU2 RecName: Full=50S ribosomal protein L3 gi|63258482|gb|AAY39578.1| Ribosomal protein L3 [Pseudomonas syringae pv. syringae B728a] gi|298156409|gb|EFH97507.1| LSU ribosomal protein L3p (L3e) [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330891931|gb|EGH24592.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. mori str. 301020] gi|330953197|gb|EGH53457.1| 50S ribosomal protein L3 [Pseudomonas syringae Cit 7] gi|330969821|gb|EGH69887.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. aceris str. M302273PT] gi|330976640|gb|EGH76684.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. aptata str. DSM 50252] gi|331012413|gb|EGH92469.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 211 Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 101/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR+++ D G + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + ++VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209 >gi|254237126|ref|ZP_04930449.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa C3719] gi|126169057|gb|EAZ54568.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa C3719] Length = 211 Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 100/212 (47%), Positives = 136/212 (64%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV AGE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEVEPNRVTQFKTEETDGYRAVQVTAGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ NV+ + ++EFR+ ++ VG + F GQ+VDVTG + GKGF Sbjct: 61 VTKAQAGHFAKANVAAGRGVWEFRL--GEEQYAVGDQITVDLFQAGQMVDVTGESKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G +G RVTV++LE+V Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHLGAERVTVQSLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA ++VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGD-VIVRPAAKA 209 >gi|237797432|ref|ZP_04585893.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. oryzae str. 1_6] gi|302189277|ref|ZP_07265950.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. syringae 642] gi|331020282|gb|EGI00339.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 211 Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 101/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR+++ D G + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQTGDQINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + ++VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209 >gi|254506374|ref|ZP_05118516.1| ribosomal protein L3 [Vibrio parahaemolyticus 16] gi|219550548|gb|EED27531.1| ribosomal protein L3 [Vibrio parahaemolyticus 16] Length = 209 Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 98/209 (46%), Positives = 135/209 (64%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ EG IPVTV+ ++ +V +TL+ +GY A+QV G K VSK Sbjct: 3 GLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGAKKANRVSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF GA Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGAELTVELFNETKKVDVTGTSKGKGFQGA 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPGA + ++V+ + K+ Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|77165787|ref|YP_344312.1| ribosomal protein L3 [Nitrosococcus oceani ATCC 19707] gi|254434228|ref|ZP_05047736.1| ribosomal protein L3 [Nitrosococcus oceani AFC27] gi|109893530|sp|Q3J8R4|RL3_NITOC RecName: Full=50S ribosomal protein L3 gi|76884101|gb|ABA58782.1| LSU ribosomal protein L3P [Nitrosococcus oceani ATCC 19707] gi|207090561|gb|EDZ67832.1| ribosomal protein L3 [Nitrosococcus oceani AFC27] Length = 215 Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 99/216 (45%), Positives = 142/216 (65%), Gaps = 4/216 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ EG IPVTV+ ++ +TL+++GY AVQV GE + Sbjct: 1 MAIGLIGRKVGMTRVFTDEGASIPVTVIEATPNRISQVKTLEQDGYQAVQVTVGERRPAR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 V+ ++G F+ NV P +KL EFR ++ D+ G F VGQ VDVTG+T G+ Sbjct: 61 VTSSLKGHFAKANVEPGRKLQEFRFGAEEGRDIKASGE-LKVDLFEVGQKVDVTGITRGR 119 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF+G ++R++FGG A+HG S+SHR+ GS G Q PGRVFK KKMAG+MG R TV+NLE Sbjct: 120 GFAGVVRRYHFGGGDASHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGQMGNVRRTVQNLE 179 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 +V +D+ R L+L+KG +PGA ++V+ + K+ V Sbjct: 180 LVRIDEGRQLLLIKGAIPGAPGGD-VIVKPAVKTVV 214 >gi|319639549|ref|ZP_07994296.1| 50S ribosomal protein L3 [Neisseria mucosa C102] gi|317399120|gb|EFV79794.1| 50S ribosomal protein L3 [Neisseria mucosa C102] Length = 214 Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 103/212 (48%), Positives = 134/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLVEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPG+ NS ++VR S K Sbjct: 181 VRVDAERQLLLVKGAVPGS-VNSDVVVRPSVK 211 >gi|312963368|ref|ZP_07777851.1| 50S ribosomal protein L3 [Pseudomonas fluorescens WH6] gi|311282448|gb|EFQ61046.1| 50S ribosomal protein L3 [Pseudomonas fluorescens WH6] Length = 211 Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 101/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR++ D G + + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEDGD--YKAGDLINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + ++VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209 >gi|330812075|ref|YP_004356537.1| 50S ribosomal protein L3 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380183|gb|AEA71533.1| 50S ribosomal protein L3 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 211 Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 100/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR+++ + G + + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGE--YQAGDLINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + ++VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209 >gi|225076395|ref|ZP_03719594.1| hypothetical protein NEIFLAOT_01440 [Neisseria flavescens NRL30031/H210] gi|224952243|gb|EEG33452.1| hypothetical protein NEIFLAOT_01440 [Neisseria flavescens NRL30031/H210] Length = 214 Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 103/212 (48%), Positives = 134/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG Sbjct: 61 VNKTEAGHFAKAGVEAGRGLVEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPG+ NS ++VR S K Sbjct: 181 VRVDAERQLLLVKGAVPGS-VNSDVVVRPSVK 211 >gi|261197061|ref|XP_002624933.1| 50S ribosomal protein L3 [Ajellomyces dermatitidis SLH14081] gi|239595563|gb|EEQ78144.1| 50S ribosomal protein L3 [Ajellomyces dermatitidis SLH14081] gi|239606530|gb|EEQ83517.1| 50S ribosomal protein L3 [Ajellomyces dermatitidis ER-3] gi|327356287|gb|EGE85144.1| 50S ribosomal protein L3 [Ajellomyces dermatitidis ATCC 18188] Length = 301 Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 94/201 (46%), Positives = 132/201 (65%), Gaps = 2/201 (0%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GMT ++++E G+RIP TVL LD QVV H+TL KNGY AVQVG G + Sbjct: 71 LRTGALAIKKGMTAIFDLETGKRIPCTVLQLDRVQVVAHKTLKKNGYYAVQVGCGWKHER 130 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V++PM G F++ V+PK+ + EFRV+ ++ LLP+G + +F GQ VD + G G Sbjct: 131 AVTRPMLGHFAANGVAPKRHIHEFRVKDENGLLPIGETINADWFQEGQYVDARSNSRGMG 190 Query: 120 FSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKRH F G +HGVS++HR S + RV+ KKMAG MG RVT +NL+ Sbjct: 191 FAGVMKRHGFHGQDRSHGVSLTHRSMGSSGPGQGGGSRVYPGKKMAGNMGNERVTQQNLK 250 Query: 179 VVSVDDKRGLILVKGCVPGAK 199 V+ VD ++G+++V G V G K Sbjct: 251 VLKVDAEKGIVVVNGSVSGPK 271 >gi|119188359|ref|XP_001244786.1| hypothetical protein CIMG_04227 [Coccidioides immitis RS] Length = 298 Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 100/213 (46%), Positives = 138/213 (64%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GM+ V + E G+R T+L LD +V+ H+T K+GY AVQVGAG Sbjct: 72 LRTGALAIKKGMSAVIDPETGKRTVCTILQLDRVEVISHKTRQKHGYFAVQVGAGWKHES 131 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV+KPM G F++ VSPK+ + EFRV+ + LLPVG + + +F GQ VDV + G G Sbjct: 132 NVTKPMLGHFAANGVSPKRYVEEFRVRDEAGLLPVGQMINADWFQEGQFVDVRSKSRGMG 191 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKR F G +HGVS++HRS G+TG Q G RV+ KKMAG MG VT++NL Sbjct: 192 FTGVMKRWGFHGQDRSHGVSLTHRSLGTTGPSQGGGSRVYPGKKMAGNMGNTPVTIQNLR 251 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V+ VD ++GL++VKG V G K + + D+ K Sbjct: 252 VLQVDPEKGLVVVKGSV-GGPKGRCVKIHDAIK 283 >gi|325191529|emb|CCA25903.1| 50S ribosomal protein L32 putative [Albugo laibachii Nc14] Length = 280 Score = 181 bits (460), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 102/210 (48%), Positives = 132/210 (62%), Gaps = 2/210 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K+GM V++ G TVL ++ CQV +T D +G+ A+Q+G G K +NV Sbjct: 38 RTGLLAVKIGMISVWDYYGVAHGCTVLQVEKCQVTQVKTSDIHGFNALQLGVGLRKPRNV 97 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP+ G + V PK++L EFRV +D LL G+ + +F GQ VDV G + GKGF Sbjct: 98 VKPLMGHLNKAGVPPKRQLQEFRVS-EDALLAAGTTLTAMHFVPGQYVDVCGTSKGKGFQ 156 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MK HNF G A+HG S +HR GSTG QDPGRVFK KKM GRMG RVT NL +V Sbjct: 157 GVMKLHNFAGQPASHGNSKTHRHMGSTGQCQDPGRVFKGKKMPGRMGNKRVTRDNLWIVK 216 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D R L+ VKG VPG K S + V D+ K Sbjct: 217 IDTVRNLLYVKGSVPGT-KGSIVRVTDARK 245 >gi|146281170|ref|YP_001171323.1| 50S ribosomal protein L3 [Pseudomonas stutzeri A1501] gi|166233183|sp|A4VHN0|RL3_PSEU5 RecName: Full=50S ribosomal protein L3 gi|145569375|gb|ABP78481.1| ribosomal protein L3 [Pseudomonas stutzeri A1501] gi|327479323|gb|AEA82633.1| 50S ribosomal protein L3 [Pseudomonas stutzeri DSM 4166] Length = 211 Score = 181 bits (460), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 100/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT V+ +G IPVTV+ ++ +V + + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRVFTEDGVSIPVTVIEIEPNRVTQFKNEESDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ NV+ + ++EFR++ ++ VG + F GQLVDVTG + GKGF Sbjct: 61 VTKAQAGHFAKANVAAGRGVWEFRLEGEE--FQVGDQINAEIFQAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LE+V Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGD-VFVRPAVKA 209 >gi|320322322|gb|EFW78416.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. glycinea str. B076] gi|320331980|gb|EFW87916.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. glycinea str. race 4] gi|330879369|gb|EGH13518.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. glycinea str. race 4] Length = 211 Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR+++ D G + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV+ LEVV Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQALEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + ++VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209 >gi|303316364|ref|XP_003068184.1| 54S ribosomal protein L9, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] gi|240107865|gb|EER26039.1| 54S ribosomal protein L9, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] gi|320037921|gb|EFW19857.1| 50S ribosomal protein L3 [Coccidioides posadasii str. Silveira] Length = 291 Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 99/213 (46%), Positives = 138/213 (64%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GM+ V + E G+R T+L LD +V+ H+T K+GY AVQVGAG Sbjct: 72 LRTGALAIKKGMSAVIDPETGKRTVCTILQLDRVEVISHKTRQKHGYFAVQVGAGWKHES 131 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV+KPM G F++ VSPK+ + EFRV+ + LLP+G + + +F GQ VDV + G G Sbjct: 132 NVTKPMLGHFAANGVSPKRYVEEFRVRDEAGLLPIGQMINADWFQEGQFVDVRSKSRGMG 191 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKR F G +HGVS++HRS G+TG Q G RV+ KKMAG MG VT++NL Sbjct: 192 FTGVMKRWGFHGQDRSHGVSLTHRSLGTTGPSQGGGSRVYPGKKMAGNMGNTPVTIQNLR 251 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V+ VD ++GL++VKG V G K + + D+ K Sbjct: 252 VLQVDPEKGLVVVKGSV-GGPKGRCVKIHDAIK 283 >gi|118595335|ref|ZP_01552682.1| 50S ribosomal protein L3 [Methylophilales bacterium HTCC2181] gi|118441113|gb|EAV47740.1| 50S ribosomal protein L3 [Methylophilales bacterium HTCC2181] Length = 216 Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 100/212 (47%), Positives = 135/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ EG IPVTVL + +V + ++ +GY ++Q+ G +K Sbjct: 1 MSLGLIGRKVGMTRVFTDEGASIPVTVLEVVPNRVTQIKKINSDGYSSLQLAYGRSKSTK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++K + G ++ +V L E R+ +++ S S F VGQ VDVTG TIGKG Sbjct: 61 LNKSLVGHYAKASVEAGLGLHELRLSEEEISNYTNESSLSVEIFQVGQKVDVTGTTIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KRH+F RATHGVSISH SHGSTG QDPGRVF KKMAG +G + T +NLEV Sbjct: 121 FQGPIKRHHFSSNRATHGVSISHNSHGSTGQCQDPGRVFPGKKMAGHLGDKKRTTQNLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V +D R LIL+KG VPG+ K S +L+R + K Sbjct: 181 VRIDSPRNLILIKGAVPGS-KGSDVLIRPAVK 211 >gi|126274899|ref|XP_001387659.1| predicted protein [Scheffersomyces stipitis CBS 6054] gi|126213529|gb|EAZ63636.1| predicted protein [Pichia stipitis CBS 6054] Length = 262 Score = 181 bits (459), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 91/199 (45%), Positives = 130/199 (65%), Gaps = 1/199 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ K GM + G + TV+ +D+C+V+ +T++ +GY +V +G + K+KNV Sbjct: 42 RPGLLGIKRGMISWFTEAGEQFAATVIEIDSCEVIKQKTVESDGYWSVLLGQID-KLKNV 100 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 ++ F + VSPK+ + EFRV+ L+PVG+ YF+VGQLVD+ ++ GKGF+ Sbjct: 101 NEKELVKFEAAGVSPKQNIGEFRVRDKSGLIPVGTELKADYFSVGQLVDIKAVSKGKGFA 160 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F GL A+HGVS+SHRS G G QDPGRV KKMAGRMGG TV N EV+ Sbjct: 161 GVMKRHGFKGLNASHGVSLSHRSAGGMGGNQDPGRVLPGKKMAGRMGGRNCTVFNNEVLH 220 Query: 182 VDDKRGLILVKGCVPGAKK 200 D + G+++VKG +PG + Sbjct: 221 ADGEAGILVVKGQIPGPAR 239 >gi|323495504|ref|ZP_08100578.1| 50S ribosomal protein L3 [Vibrio sinaloensis DSM 21326] gi|323319385|gb|EGA72322.1| 50S ribosomal protein L3 [Vibrio sinaloensis DSM 21326] Length = 209 Score = 181 bits (459), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 97/209 (46%), Positives = 135/209 (64%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ EG IPVTV+ ++ +V +TL+ +GY A+QV G K VSK Sbjct: 3 GLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGAKKANRVSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR++ D++ VG+ + F + VDVTG + GKGF GA Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLENDEEF-AVGAELTVELFNDTKKVDVTGTSKGKGFQGA 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPG+ + ++V+ + K+ Sbjct: 182 AERNLLLIKGAVPGSTGGN-VIVKPAVKA 209 >gi|71736464|ref|YP_276706.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. phaseolicola 1448A] gi|109893538|sp|Q48D36|RL3_PSE14 RecName: Full=50S ribosomal protein L3 gi|71557017|gb|AAZ36228.1| ribosomal protein L3 [Pseudomonas syringae pv. phaseolicola 1448A] Length = 211 Score = 181 bits (459), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 100/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR+++ D G + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LE+V Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLELV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + ++VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209 >gi|89095538|ref|ZP_01168443.1| 50S ribosomal protein L3 [Oceanospirillum sp. MED92] gi|89080213|gb|EAR59480.1| 50S ribosomal protein L3 [Oceanospirillum sp. MED92] Length = 212 Score = 181 bits (459), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 99/212 (46%), Positives = 135/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK GMT V+N +G +PVTV+ ++ +V +T + +GY AVQV G K Sbjct: 1 MTVGLIGRKAGMTRVFNEDGVSVPVTVIEVEPNRVTAVKTEETDGYAAVQVTTGGKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SKP G F+ V + L+EFR+ D++ VG + + F GQ VDVTG + GKGF Sbjct: 61 LSKPEAGNFAKAGVEAGRGLWEFRLSGGDEV-NVGEELTVARFEAGQKVDVTGQSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF ATHG S+SHR+ GS G Q PGRV+K KKMAG+MG RVTV+ LEVV Sbjct: 120 QGGVKRWNFSMQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGQMGNERVTVQTLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA ++V+ + K+ Sbjct: 180 RVDAERNLLLIKGAVPGATGGD-VIVKPAVKA 210 >gi|302871498|ref|YP_003840134.1| 50S ribosomal protein L3 [Caldicellulosiruptor obsidiansis OB47] gi|302574357|gb|ADL42148.1| 50S ribosomal protein L3 [Caldicellulosiruptor obsidiansis OB47] Length = 210 Score = 181 bits (459), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 103/212 (48%), Positives = 133/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V++ EGR IPVTV+ C VV +T++K+GY A+QVG + K Sbjct: 1 MTKGILGKKIGMTQVFDEEGRVIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+RG F+ V PK+ L E R+ KD D VG F G+ VDVTG++ KGF Sbjct: 61 LNKPLRGHFAKHGVKPKRYLRELRL-KDADKYEVGQEIRVDIFQPGERVDVTGISKAKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH +HG S+ HR GS G P R F KKM GRMGG RVTV NL+VV Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD R L+LVKG VPG KNS +++RDS KS Sbjct: 179 KVDPDRNLLLVKGSVPG-NKNSLLIIRDSVKS 209 >gi|167564417|ref|ZP_02357333.1| 50S ribosomal protein L3 [Burkholderia oklahomensis EO147] gi|167571563|ref|ZP_02364437.1| 50S ribosomal protein L3 [Burkholderia oklahomensis C6786] Length = 219 Score = 181 bits (458), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 95/200 (47%), Positives = 126/200 (63%), Gaps = 1/200 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR+ L G++ P F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAK 199 +D R L+LVKG VPGAK Sbjct: 181 ARIDADRKLLLVKGAVPGAK 200 >gi|15599459|ref|NP_252953.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa PAO1] gi|116052298|ref|YP_788856.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa UCBPP-PA14] gi|152989623|ref|YP_001346223.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa PA7] gi|218889409|ref|YP_002438273.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa LESB58] gi|296387180|ref|ZP_06876679.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa PAb1] gi|42559696|sp|Q9HWD5|RL3_PSEAE RecName: Full=50S ribosomal protein L3 gi|122261447|sp|Q02T80|RL3_PSEAB RecName: Full=50S ribosomal protein L3 gi|166233180|sp|A6UZI8|RL3_PSEA7 RecName: Full=50S ribosomal protein L3 gi|226730551|sp|B7V644|RL3_PSEA8 RecName: Full=50S ribosomal protein L3 gi|9950480|gb|AAG07651.1|AE004841_29 50S ribosomal protein L3 [Pseudomonas aeruginosa PAO1] gi|115587519|gb|ABJ13534.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa UCBPP-PA14] gi|150964781|gb|ABR86806.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa PA7] gi|218769632|emb|CAW25392.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa LESB58] Length = 211 Score = 181 bits (458), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 99/212 (46%), Positives = 135/212 (63%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV AGE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEVEPNRVTQFKTEETDGYRAVQVTAGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ NV+ + ++EFR+ ++ G + F GQ+VDVTG + GKGF Sbjct: 61 VTKAQAGHFAKANVAAGRGVWEFRL--GEEQYAAGDQITVDLFQAGQMVDVTGESKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G +G RVTV++LE+V Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHLGAERVTVQSLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA ++VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGD-VIVRPAAKA 209 >gi|254483423|ref|ZP_05096652.1| ribosomal protein L3 [marine gamma proteobacterium HTCC2148] gi|214036297|gb|EEB76975.1| ribosomal protein L3 [marine gamma proteobacterium HTCC2148] Length = 211 Score = 181 bits (458), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 100/212 (47%), Positives = 131/212 (61%), Gaps = 1/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT V+ +G IPVTV+ + +V + L+ +GY A+QV G K Sbjct: 1 MAIGLVGRKSGMTRVFTEDGASIPVTVVEVSPNRVTQIKELETDGYRAIQVTTGNRKASK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK G F+ V KL EFR++ D+ VG + F VGQ+VDVTG + GKGF Sbjct: 61 VSKSEAGHFAKAGVEAGTKLSEFRLEASDEAPEVGVELTVERFEVGQIVDVTGKSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF ATHG SISHR++GS G Q PGRVFK KKM+G MG +VT + LEV+ Sbjct: 121 QGGIKRWNFTMQDATHGNSISHRANGSIGQCQTPGRVFKGKKMSGHMGSEQVTTQGLEVI 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA ++VR + K+ Sbjct: 181 RVDAERNLLLIKGAVPGAPGGD-VVVRPTVKA 211 >gi|261250417|ref|ZP_05942992.1| LSU ribosomal protein L3p (L3e) [Vibrio orientalis CIP 102891] gi|260938986|gb|EEX94973.1| LSU ribosomal protein L3p (L3e) [Vibrio orientalis CIP 102891] Length = 209 Score = 181 bits (458), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 98/209 (46%), Positives = 134/209 (64%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ EG IPVTV+ ++ +V +TLD +GY A+QV G K VSK Sbjct: 3 GLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLDTDGYAAIQVTTGAKKANRVSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF GA Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGAELTVELFNDTKKVDVTGTSKGKGFQGA 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPGA + ++V+ + K+ Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|28867854|ref|NP_790473.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tomato str. DC3000] gi|213969214|ref|ZP_03397352.1| ribosomal protein L3 [Pseudomonas syringae pv. tomato T1] gi|301381721|ref|ZP_07230139.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tomato Max13] gi|302061079|ref|ZP_07252620.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tomato K40] gi|302130780|ref|ZP_07256770.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|42559621|sp|Q889X1|RL3_PSESM RecName: Full=50S ribosomal protein L3 gi|28851090|gb|AAO54168.1| ribosomal protein L3 [Pseudomonas syringae pv. tomato str. DC3000] gi|213925892|gb|EEB59449.1| ribosomal protein L3 [Pseudomonas syringae pv. tomato T1] gi|330879442|gb|EGH13591.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330966911|gb|EGH67171.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. actinidiae str. M302091] Length = 211 Score = 181 bits (458), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 100/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR+++ + G + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGE--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + ++VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209 >gi|328851231|gb|EGG00388.1| hypothetical protein MELLADRAFT_73188 [Melampsora larici-populina 98AG31] Length = 336 Score = 181 bits (458), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 92/200 (46%), Positives = 127/200 (63%), Gaps = 1/200 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN- 60 R+GV+ARK GMT ++ +G R+PVTVL L++ QV+ H+ ++ Y AVQVG +N Sbjct: 65 RTGVIARKRGMTSFWDADGVRVPVTVLELEDVQVIGHKYHARDSYCAVQVGCSNRNTRNN 124 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++ R +F V+PK ++ EF+V + L+PVG+ S ++F GQ VDV + GKGF Sbjct: 125 LNSSQRKWFEHAGVNPKHRVAEFQVTDETSLVPVGTEISSAHFVPGQFVDVKANSKGKGF 184 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR F G A+HG + HR GSTG QDPGRV+ KKMAGRMG +TV+NL V Sbjct: 185 AGVMKRWGFSGGNASHGSTKHHRKAGSTGQHQDPGRVWPGKKMAGRMGNQPITVRNLLVA 244 Query: 181 SVDDKRGLILVKGCVPGAKK 200 +D ++ VKG VPG K Sbjct: 245 RIDTALNVVYVKGQVPGPTK 264 >gi|42520530|ref|NP_966445.1| 50S ribosomal protein L3 [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410269|gb|AAS14379.1| ribosomal protein L3 [Wolbachia endosymbiont of Drosophila melanogaster] Length = 240 Score = 181 bits (458), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 97/215 (45%), Positives = 144/215 (66%), Gaps = 6/215 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ +G T +Y+ + R+ VT+LHL ++ + DK GY +V +G G+ KN+ Sbjct: 9 RIGLLMMNIGHTAMYS-DNSRMAVTLLHLSETHIIDIKGQDKCGYNSVILGTGD--FKNI 65 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP + ++ K KL+E R+ D + G ++F VGQ +D+TG +IGKGF+ Sbjct: 66 AKPQLEYLKKKGINNKCKLYESRLN-DLSGIECGKKVGINHFVVGQYLDITGYSIGKGFA 124 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF GLRA+HGVSI+HRS GSTG QDPGRVFK KKMAG +G +R+T +N++++S Sbjct: 125 GVMKRHNFSGLRASHGVSIAHRSQGSTGQCQDPGRVFKGKKMAGHLGNSRITAQNMKILS 184 Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVN 215 +D + +I VKG VPG KNS++ VRD+ K +++ Sbjct: 185 IDHENSIIAVKGNNVPGF-KNSYVFVRDAVKKSLH 218 >gi|268609593|ref|ZP_06143320.1| 50S ribosomal protein L3 [Ruminococcus flavefaciens FD-1] Length = 210 Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 135/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +K+GMT +++ G+ +PVTV+ C VV +T++ +GY A+Q+G G+ KV+ Sbjct: 1 MQKGIIGKKIGMTQIFDEAGKVVPVTVVEAGPCVVVQKKTVENDGYAALQLGYGDVKVQR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KPM+G F +V+ KK L EFR++ D D L VG + F VG +DV G + GKG+ Sbjct: 61 MNKPMKGHFDKADVACKKTLKEFRLE-DCDALNVGDIVKADTFAVGDAIDVVGTSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHN L+ THG HR GS G P R++K K MAG MG +VTV+NLE+V Sbjct: 120 AGPIKRHNQHRLKETHGTGPVHRQAGSMGACSSPSRIYKGKGMAGHMGAEQVTVQNLEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D + LI +KG +PG K + + DS K+ Sbjct: 180 KIDVENNLIAIKGAIPGP-KGGIVYIVDSVKA 210 >gi|271962632|ref|YP_003336828.1| 50S ribosomal protein L3P [Streptosporangium roseum DSM 43021] gi|270505807|gb|ACZ84085.1| LSU ribosomal protein L3P [Streptosporangium roseum DSM 43021] Length = 217 Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 96/208 (46%), Positives = 132/208 (63%), Gaps = 2/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ +KLGMT V++ + R +PVTV+ C V RT +K+GY AVQ+G G+ + V+K Sbjct: 7 GVLGKKLGMTQVFDADNRMVPVTVVEAGPCVVTRVRTPEKDGYSAVQLGFGQVDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ + +++P++ E R + D +G S F GQ VDVTG + GKGF+G Sbjct: 67 PLGDYLRKHDITPRRYFAEIRTEDAGDYT-LGQELSADTFEAGQFVDVTGKSKGKGFAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GL A+HG HRS GS G PGRVFK +MAGRMG R TV++L+V +VD Sbjct: 126 MKRHGFKGLSASHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNVRTTVQSLKVHAVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 ++GLIL+KG +PGA S +LVR + K Sbjct: 186 AEKGLILIKGAIPGA-NGSLVLVRTAAK 212 >gi|312135496|ref|YP_004002834.1| 50S ribosomal protein l3 [Caldicellulosiruptor owensensis OL] gi|311775547|gb|ADQ05034.1| 50S ribosomal protein L3 [Caldicellulosiruptor owensensis OL] Length = 210 Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 102/212 (48%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V++ EGR IPVTV+ C VV +T++K+GY A+QVG + K Sbjct: 1 MTKGILGKKIGMTQVFDEEGRVIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP++G F+ V PK+ L E R+ KD D VG F G+ VDVTG++ KGF Sbjct: 61 LNKPLKGHFAKHGVKPKRYLRELRL-KDADKYEVGQEIRVDIFQPGERVDVTGISKAKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH +HG S+ HR GS G P R F KKM GRMGG RVTV NL+VV Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPG KNS +++RDS KS Sbjct: 179 KVDPERNLLLVKGSVPG-NKNSLLIIRDSVKS 209 >gi|71065059|ref|YP_263786.1| 50S ribosomal protein L3 [Psychrobacter arcticus 273-4] gi|109893542|sp|Q4FUF6|RL3_PSYA2 RecName: Full=50S ribosomal protein L3 gi|71038044|gb|AAZ18352.1| LSU ribosomal protein L3P [Psychrobacter arcticus 273-4] Length = 212 Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 97/214 (45%), Positives = 134/214 (62%), Gaps = 4/214 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V +K GMT V+ G IPVTV+ + ++ + D +GY A+QV G + Sbjct: 1 MAIGLVGKKCGMTRVFTEAGASIPVTVVEISANRITQVKNTDVDGYQAIQVTTGTRRDSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLL--PVGSVFSPSYFTVGQLVDVTGMTIGK 118 V+ +G F+ V+ + ++EFR D DL +G F GQ+VDVTG + GK Sbjct: 61 VTAAQKGHFAKAGVAAGRGVWEFRA-NDSDLEGREIGGEILADLFEQGQMVDVTGSSKGK 119 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G +KRHNF ATHG S+SHR+HGSTG Q PG+VFK KKMAG+MG RVTV+ LE Sbjct: 120 GFQGPVKRHNFSMQDATHGNSVSHRAHGSTGQNQSPGKVFKGKKMAGQMGNKRVTVQGLE 179 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V+SVD ++GL+++KG +PGA ++VR S K+ Sbjct: 180 VISVDAEKGLLVIKGAIPGATGGD-VIVRPSVKA 212 >gi|260772096|ref|ZP_05881013.1| LSU ribosomal protein L3p (L3e) [Vibrio metschnikovii CIP 69.14] gi|260612963|gb|EEX38165.1| LSU ribosomal protein L3p (L3e) [Vibrio metschnikovii CIP 69.14] Length = 209 Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 98/209 (46%), Positives = 135/209 (64%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT V+ EG IPVTV+ ++ +V +TL+ +GY A+QV AG K V+K Sbjct: 3 GLVGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGTKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF GA Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELTVELFNEIKKVDVTGTSKGKGFQGA 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPGA + ++V+ + K+ Sbjct: 182 AERNLLLIKGAVPGATGAN-VIVKPAIKA 209 >gi|303256450|ref|ZP_07342464.1| 50S ribosomal protein L3 [Burkholderiales bacterium 1_1_47] gi|331000644|ref|ZP_08324297.1| 50S ribosomal protein L3 [Parasutterella excrementihominis YIT 11859] gi|302859941|gb|EFL83018.1| 50S ribosomal protein L3 [Burkholderiales bacterium 1_1_47] gi|329570856|gb|EGG52567.1| 50S ribosomal protein L3 [Parasutterella excrementihominis YIT 11859] Length = 216 Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 98/210 (46%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT ++ +G IPVTVL + N ++ +T++ +GY AVQV G K VSK Sbjct: 6 GLVGRKIGMTRIFTEDGVSIPVTVLEVSNNRITQVKTVETDGYNAVQVAFGSKKPSRVSK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G F V L EF V++D + VG S F+ GQ VDVTG TIGKGF+G Sbjct: 66 PLKGQFEKAGVEAGSMLKEFHVEEDKIGEMKVGQTLSIDMFSEGQKVDVTGTTIGKGFAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KRH+F RA+HG S+S + GS G RQDPGRVF K+MAG +G + T +NL + V Sbjct: 126 AIKRHHFSSNRASHGNSVSTNAPGSIGNRQDPGRVFPGKRMAGHLGDVQRTTQNLVIARV 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D R LILV+G VPG N +++R + K+ Sbjct: 186 DADRQLILVRGAVPGC-ANGEVIIRPAVKA 214 >gi|241957878|ref|XP_002421658.1| 60s ribosomal protein, mitochondrial precursor, putative [Candida dubliniensis CD36] gi|223645003|emb|CAX39595.1| 60s ribosomal protein, mitochondrial precursor, putative [Candida dubliniensis CD36] Length = 293 Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 105/222 (47%), Positives = 141/222 (63%), Gaps = 10/222 (4%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+ A K GM +N +G IP TVL +D+C+V+ ++ GY AV +G + K+KNV Sbjct: 67 RPGLFAIKRGMITWFNEKGEHIPATVLEVDSCEVLGYKLFRDFGYTAVIMGTID-KLKNV 125 Query: 62 --SKPMRGFFSSVNVSPKKKLFEFRVQKDDD-----LLPVGSVFSPSYFTVGQLVDVTGM 114 + +R F + VSPK+K+ EF+++ D+ L+PVG+ + YFTVGQ VDV G+ Sbjct: 126 KSTNDLR-IFETAKVSPKQKIGEFKIRSIDNDIESKLIPVGTELTADYFTVGQKVDVKGI 184 Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 T GKGF+G MKR F G RATHG S +HR+ G+TG Q+PGRVF KKM GRMG T Sbjct: 185 TKGKGFAGVMKRWGFSGGRATHGTSKAHRTPGATGGNQNPGRVFPGKKMPGRMGNRNNTG 244 Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 NLEV+ D + G+++VKG VPG KK S I V D+ K N Sbjct: 245 FNLEVLHTDGEAGILIVKGNVPGPKK-SIIKVYDAIKEYGNS 285 >gi|296137306|ref|YP_003644548.1| 50S ribosomal protein L3 [Thiomonas intermedia K12] gi|295797428|gb|ADG32218.1| 50S ribosomal protein L3 [Thiomonas intermedia K12] Length = 220 Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 100/212 (47%), Positives = 136/212 (64%), Gaps = 4/212 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT V+ +G I VTVL +V RT D +GY AVQV G K ++K Sbjct: 7 GLVTRKVGMTRVFTDDGASIAVTVLDASGNRVSQVRTQDVDGYSAVQVAYGSRKPSRLTK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRV--QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 G + V P + L EF + +K D +G+ S F VGQ+VD G++IGKGF+ Sbjct: 67 GQAGHLAKAGVEPAEILKEFDLPAEKAADYA-LGATVPASLFQVGQMVDAQGVSIGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G++KRHNF RA+HG S++ R+ GS G QDPGRVF K+MAG+MG VTV+NLEVV Sbjct: 126 GSIKRHNFSSNRASHGNSVTTRAPGSIGMAQDPGRVFPGKRMAGQMGNETVTVQNLEVVR 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +D+ R LILVKG VPG+ ++ ++ +R + KSA Sbjct: 186 IDEARQLILVKGAVPGS-RSGFVFLRPAVKSA 216 >gi|254468609|ref|ZP_05082015.1| ribosomal protein L3 [beta proteobacterium KB13] gi|207087419|gb|EDZ64702.1| ribosomal protein L3 [beta proteobacterium KB13] Length = 216 Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 96/199 (48%), Positives = 126/199 (63%), Gaps = 1/199 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G +PVTVL + +V + +D NGY +QV G +K Sbjct: 1 MSLGLVGRKVGMTRLFTEDGNSVPVTVLEVVPNKVTQIKKIDDNGYNGLQVSYGNSKSSK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++K ++G + V L EFRV D+ + +G S F GQ VD+TG TIGKG Sbjct: 61 LNKSIKGHLAKAGVDSIDGLKEFRVTGDELNNFQLGGELKVSIFEAGQKVDITGTTIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KRH+FG RATHG SISH + GSTG QDPGRVFK KKMAG MG T +NLEV Sbjct: 121 FQGGIKRHHFGSQRATHGNSISHNAPGSTGMCQDPGRVFKGKKMAGHMGAVTRTTQNLEV 180 Query: 180 VSVDDKRGLILVKGCVPGA 198 + VD+ R LI++KG VPG+ Sbjct: 181 IRVDENRNLIMIKGAVPGS 199 >gi|309379159|emb|CBX22290.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 214 Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 103/212 (48%), Positives = 133/212 (62%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V EF + ++ + L G + S F VGQLVDVTG + GKG Sbjct: 61 VNKAEAGHFAKAGVEGGSGSIEFALTEEKPVELKAGDEITVSMFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGTTKATVQKLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPGA NS ++VR S K Sbjct: 181 VRVDAERQLLLVKGAVPGA-VNSDVVVRPSVK 211 >gi|225629696|ref|ZP_03787668.1| ribosomal protein L3 [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225630301|ref|YP_002727092.1| ribosomal protein L3 [Wolbachia sp. wRi] gi|225591449|gb|EEH12517.1| ribosomal protein L3 [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225592282|gb|ACN95301.1| ribosomal protein L3 [Wolbachia sp. wRi] Length = 240 Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 97/215 (45%), Positives = 144/215 (66%), Gaps = 6/215 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ +G T +Y+ + R+ VT+LHL ++ + DK GY +V +G G+ KN+ Sbjct: 9 RIGLLMMNIGHTAMYS-DNSRMAVTLLHLSETYIIDIKGQDKCGYNSVILGTGD--FKNI 65 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP + ++ K KL+E R+ D + G ++F VGQ +D+TG +IGKGF+ Sbjct: 66 AKPQLEYLKKKGINNKCKLYESRLN-DLSGIECGKKVGINHFVVGQYLDITGYSIGKGFA 124 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF GLRA+HGVSI+HRS GSTG QDPGRVFK KKMAG +G +R+T +N++++S Sbjct: 125 GVMKRHNFSGLRASHGVSIAHRSQGSTGQCQDPGRVFKGKKMAGHLGNSRITAQNMKILS 184 Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVN 215 +D + +I VKG VPG KNS++ VRD+ K +++ Sbjct: 185 IDHENSIIAVKGNNVPGF-KNSYVFVRDAVKKSLH 218 >gi|294669824|ref|ZP_06734883.1| hypothetical protein NEIELOOT_01717 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308217|gb|EFE49460.1| hypothetical protein NEIELOOT_01717 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 214 Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGASVPVTVLEMTPNRVTQLKSEDADGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF V + L G + + F GQLVDVTG + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLVEFAVSAEKAAELQAGGEVTVALFEAGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNF R +HG S SHR GS G QDPGRVF ++MAG+ G + TV+NLE+ Sbjct: 121 FSGTIKRHNFDSQRTSHGNSRSHRVPGSIGMAQDPGRVFPGQRMAGQYGNTKATVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPGA NS ++VR S K Sbjct: 181 VRVDVERHLLLVKGAVPGA-VNSDVIVRPSVK 211 >gi|258625740|ref|ZP_05720619.1| 50S ribosomal protein L3 [Vibrio mimicus VM603] gi|258581978|gb|EEW06848.1| 50S ribosomal protein L3 [Vibrio mimicus VM603] Length = 209 Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 97/209 (46%), Positives = 136/209 (65%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV AG K V+K Sbjct: 3 GLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR++ ++ VGS + F+ + VDVTG + GKGF GA Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFSEVKKVDVTGTSKGKGFQGA 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPGA + ++V+ + K+ Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|239787563|emb|CAX84031.1| 50S ribosomal protein L3 [uncultured bacterium] Length = 213 Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 98/212 (46%), Positives = 135/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++ RKLGM+ ++ +G+ + VT++ + C +V + + +GY AVQ+G +AK Sbjct: 1 MRAGLIGRKLGMSRIFTADGKSVAVTLVKVGPCPIVGVKRGEPDGYEAVQLGYEDAKPSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V KP RG F+ NV P++ L EFRV P G + F VG VDVTG ++GKGF Sbjct: 61 VKKPERGVFAKANVPPQRILKEFRVDDASGYQP-GESLGLNLFEVGGRVDVTGRSVGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR F G RA+HG ++HRS GS G Q PGRVFKNKKMAG MG VT L V Sbjct: 120 AGGMKRWGFRGGRASHGAHLTHRSPGSIGQCQTPGRVFKNKKMAGHMGDVNVTAMGLTVA 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+++KG VPG+ K S + +RD+ K+ Sbjct: 180 MVDLERNLLVLKGSVPGS-KGSVVFIRDAVKA 210 >gi|255943633|ref|XP_002562584.1| Pc20g00200 [Penicillium chrysogenum Wisconsin 54-1255] gi|211587319|emb|CAP85349.1| Pc20g00200 [Penicillium chrysogenum Wisconsin 54-1255] Length = 296 Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 94/201 (46%), Positives = 129/201 (64%), Gaps = 2/201 (0%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G + K GMT +Y+ E G+RIP TVL LD +V+ H+T +++GY AVQVGAG Sbjct: 68 LRTGAIGIKKGMTAIYDPESGKRIPCTVLQLDRVEVISHKTRERHGYYAVQVGAGWKHPS 127 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV+K M G FS +SPK+ +FEFRV+ + L+PVG +F GQ VD T GKG Sbjct: 128 NVTKSMLGHFSVNGISPKRHIFEFRVKDEAGLIPVGQSIEAGWFQEGQFVDARSNTKGKG 187 Query: 120 FSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKRH FGG +HGVS++HR S + RV+ KKMAG MG + TV+NL+ Sbjct: 188 FAGVMKRHGFGGQDRSHGVSLTHRSMGSSGPGQGGGSRVYPGKKMAGNMGNTQNTVQNLK 247 Query: 179 VVSVDDKRGLILVKGCVPGAK 199 ++ VD + G+++V G V G K Sbjct: 248 ILKVDSENGIVVVSGAVSGPK 268 >gi|313206395|ref|YP_004045572.1| LSU ribosomal protein l3p [Riemerella anatipestifer DSM 15868] gi|312445711|gb|ADQ82066.1| LSU ribosomal protein L3P [Riemerella anatipestifer DSM 15868] gi|315023664|gb|EFT36668.1| LSU ribosomal protein L3p (L3e) [Riemerella anatipestifer RA-YM] gi|325336160|gb|ADZ12434.1| Ribosomal protein L3 [Riemerella anatipestifer RA-GD] Length = 207 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 95/206 (46%), Positives = 136/206 (66%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C V+ RT++K+GY+ Q+G + KNV Sbjct: 2 SGIIGKKIGMTSLFDESGKNIPCTVIQAGPCSVLQVRTVEKDGYVGYQLGFDDKSEKNVG 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K + G F +PK KL EF D+ L VG + F+ G+ VDVTG + GKGF G Sbjct: 62 KALAGHFKKAGSTPKAKLHEFHHGFDN--LQVGDEVTVKLFSEGEYVDVTGTSKGKGFQG 119 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG ++ATHG R+ GS G DP RVFK +MAGRMGG +VTV+NL+V+ Sbjct: 120 VVKRHGFGGVMQATHGQHNRLRAPGSIGAGSDPSRVFKGLRMAGRMGGKQVTVQNLQVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 VD+++ L++VKG VPGA KNS++++R Sbjct: 180 VDEEQNLLVVKGAVPGA-KNSYVIIR 204 >gi|293602635|ref|ZP_06685078.1| 50S ribosomal protein L3 [Achromobacter piechaudii ATCC 43553] gi|292819007|gb|EFF78045.1| 50S ribosomal protein L3 [Achromobacter piechaudii ATCC 43553] Length = 233 Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 100/213 (46%), Positives = 133/213 (62%), Gaps = 3/213 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+V RK+GMT ++ EG IPVTVL + N +V ++L+ +GY A+QV G + V Sbjct: 16 RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQVKSLETDGYAAIQVAYGTRRASRV 75 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFS-PSYFTVGQLVDVTGMTIGKG 119 ++P G ++ L EFR+ GSV + S F GQ VDVTG TIGKG Sbjct: 76 AQPQTGHYAKAGTEAGSILKEFRLDPARAAEFAAGSVIAVESVFEAGQQVDVTGTTIGKG 135 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRH+FG RA+HG S SHR GS G QDPGR+F K+MAG +G TV+NL+V Sbjct: 136 FAGTIKRHHFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMAGHLGDVTRTVQNLDV 195 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +RGL+LVKG VPG + I+VR + K+ Sbjct: 196 VRVDVERGLLLVKGAVPG-HAGADIVVRPAIKA 227 >gi|329118598|ref|ZP_08247302.1| 50S ribosomal protein L3 [Neisseria bacilliformis ATCC BAA-1200] gi|327465333|gb|EGF11614.1| 50S ribosomal protein L3 [Neisseria bacilliformis ATCC BAA-1200] Length = 214 Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K K+ Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLEITPNRVTQLKSEDTDGYTAVQVTFGQKKAKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 K G F+ V + L EF + + L VG S S F VGQLVD+TG + GKG Sbjct: 61 TGKAEAGHFAKAGVEAGRGLVEFALSAEKLSELQVGGEISVSLFEVGQLVDITGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNF R +HG S SHR GS G QDPGRVF ++MAG+ G + T +NL+V Sbjct: 121 FSGTIKRHNFDSQRTSHGNSRSHRVPGSIGMAQDPGRVFPGQRMAGQYGNTKSTAQNLQV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPGA NS ++VR K Sbjct: 181 VRVDAERNLLLVKGAVPGA-VNSDVIVRPGVK 211 >gi|167587772|ref|ZP_02380160.1| ribosomal protein L3 [Burkholderia ubonensis Bu] gi|325529678|gb|EGD06541.1| 50S ribosomal protein L3 [Burkholderia sp. TJI49] Length = 216 Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 94/200 (47%), Positives = 127/200 (63%), Gaps = 1/200 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR+ L G++ P F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAK 199 +D +R L+LVKG +PGAK Sbjct: 181 ARIDAERKLLLVKGAIPGAK 200 >gi|88607449|ref|YP_504892.1| 50S ribosomal protein L3 [Anaplasma phagocytophilum HZ] gi|88598512|gb|ABD43982.1| ribosomal protein L3 [Anaplasma phagocytophilum HZ] Length = 220 Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 105/209 (50%), Positives = 140/209 (66%), Gaps = 6/209 (2%) Query: 8 RKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMR 66 +K+G T +++ G R+PVT+L L++ VV + +GY AV +G V V+KP Sbjct: 4 KKVGSTAMFDATTGSRVPVTLLLLEDTFVVGTKVSGIHGYDAVVLGTKRRGV--VNKPQV 61 Query: 67 GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKR 126 + + KLFE RV+ DL P GS S+F GQ VDVTG TIG+GF+G MKR Sbjct: 62 QALRKLGIEEDYKLFESRVKAVGDLQP-GSKVEVSHFFKGQFVDVTGYTIGRGFAGVMKR 120 Query: 127 HNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKR 186 HNF GLRA+HGVSISHRS GSTG QDPGRVFK KKMAG MG ++VT++NL+V+ VD+K Sbjct: 121 HNFRGLRASHGVSISHRSQGSTGQCQDPGRVFKGKKMAGHMGDSKVTMQNLQVMLVDEKE 180 Query: 187 GLILVKGC-VPGAKKNSWILVRDSFKSAV 214 L++V+G +PGA + S++ VRD+ K V Sbjct: 181 SLLVVRGTGIPGA-EGSYVFVRDAIKKPV 208 >gi|312795774|ref|YP_004028696.1| LSU ribosomal protein L3P [Burkholderia rhizoxinica HKI 454] gi|312167549|emb|CBW74552.1| LSU ribosomal protein L3P [Burkholderia rhizoxinica HKI 454] Length = 247 Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 96/201 (47%), Positives = 129/201 (64%), Gaps = 3/201 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTVL + + +V +T++ +GY AVQV GE + Sbjct: 30 MSLGLVGRKVGMTRIFTADGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGERRASR 89 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 V+KP+ G + V + L EFR++ D +L P GSV F VGQ VDV G++IGK Sbjct: 90 VTKPLAGHLAKAGVQAGEILKEFRIEADKAAELSP-GSVVGVDLFEVGQKVDVQGVSIGK 148 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G +G T +NLE Sbjct: 149 GYAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTATTQNLE 208 Query: 179 VVSVDDKRGLILVKGCVPGAK 199 + +D +R LILVKG VPGAK Sbjct: 209 IARIDAQRKLILVKGAVPGAK 229 >gi|169794594|ref|YP_001712387.1| 50S ribosomal protein L3 [Acinetobacter baumannii AYE] gi|213158835|ref|YP_002320833.1| ribosomal protein L3 [Acinetobacter baumannii AB0057] gi|215482183|ref|YP_002324365.1| Ribosomal protein L3 family protein [Acinetobacter baumannii AB307-0294] gi|239503234|ref|ZP_04662544.1| 50S ribosomal protein L3 [Acinetobacter baumannii AB900] gi|294839747|ref|ZP_06784430.1| 50S ribosomal protein L3 [Acinetobacter sp. 6013113] gi|294842653|ref|ZP_06787336.1| 50S ribosomal protein L3 [Acinetobacter sp. 6014059] gi|294860425|ref|ZP_06798194.1| 50S ribosomal protein L3 [Acinetobacter sp. 6013150] gi|301345010|ref|ZP_07225751.1| 50S ribosomal protein L3 [Acinetobacter baumannii AB056] gi|301512059|ref|ZP_07237296.1| 50S ribosomal protein L3 [Acinetobacter baumannii AB058] gi|301596104|ref|ZP_07241112.1| 50S ribosomal protein L3 [Acinetobacter baumannii AB059] gi|226725115|sp|B7GW02|RL3_ACIB3 RecName: Full=50S ribosomal protein L3 gi|226725116|sp|B7IA39|RL3_ACIB5 RecName: Full=50S ribosomal protein L3 gi|226725118|sp|B0V6W8|RL3_ACIBY RecName: Full=50S ribosomal protein L3 gi|226725207|sp|A3M983|RL3_ACIBT RecName: Full=50S ribosomal protein L3 gi|169147521|emb|CAM85382.1| 50S ribosomal protein L3 [Acinetobacter baumannii AYE] gi|193078477|gb|ABO13477.2| 50S ribosomal protein L3 [Acinetobacter baumannii ATCC 17978] gi|213057995|gb|ACJ42897.1| ribosomal protein L3 [Acinetobacter baumannii AB0057] gi|213985898|gb|ACJ56197.1| Ribosomal protein L3 family protein [Acinetobacter baumannii AB307-0294] gi|322509508|gb|ADX04962.1| 50S ribosomal protein L3 [Acinetobacter baumannii 1656-2] gi|323519528|gb|ADX93909.1| 50S ribosomal protein L3 [Acinetobacter baumannii TCDC-AB0715] Length = 212 Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY AVQV GE + Sbjct: 1 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFRV + + + VG FTVGQ+VDVTG + GKG Sbjct: 61 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+ Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VSVD +R +++VKG +PGA ++VR + K+ Sbjct: 181 VSVDTERSVLVVKGAIPGATGGD-VIVRPTIKA 212 >gi|126643095|ref|YP_001086079.1| 50S ribosomal protein L3 [Acinetobacter baumannii ATCC 17978] gi|184159598|ref|YP_001847937.1| 50S ribosomal protein L3 [Acinetobacter baumannii ACICU] gi|260557027|ref|ZP_05829244.1| 50S ribosomal protein L3 [Acinetobacter baumannii ATCC 19606] gi|212288243|sp|B2HZM2|RL3_ACIBC RecName: Full=50S ribosomal protein L3 gi|183211192|gb|ACC58590.1| 50S ribosomal protein L3 [Acinetobacter baumannii ACICU] gi|260409633|gb|EEX02934.1| 50S ribosomal protein L3 [Acinetobacter baumannii ATCC 19606] Length = 214 Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY AVQV GE + Sbjct: 3 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 62 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFRV + + + VG FTVGQ+VDVTG + GKG Sbjct: 63 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+ Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VSVD +R +++VKG +PGA ++VR + K+ Sbjct: 183 VSVDTERSVLVVKGAIPGATGGD-VIVRPTIKA 214 >gi|254427943|ref|ZP_05041650.1| ribosomal protein L3 [Alcanivorax sp. DG881] gi|196194112|gb|EDX89071.1| ribosomal protein L3 [Alcanivorax sp. DG881] Length = 211 Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 98/212 (46%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GV+ RK GMT V+ EG +PVTV+ + +V +T + +GY AVQV GE + Sbjct: 1 MAIGVIGRKCGMTRVFTEEGVSVPVTVIEVSPNRVSQVKTEESDGYQAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ V + ++EFR + + GS + F GQ++DVTG + GKGF Sbjct: 61 VTKAQAGHFAKAGVEAGRGVWEFRAEAGE--FEAGSAVTVEGFEAGQMIDVTGSSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF ATHG S+SHR+ GS G Q PGRVFK KKMAG +G RVTV+NLEVV Sbjct: 119 AGGVKRWNFSTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHLGAERVTVQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + L+LVKG VPGA ++VR + K+ Sbjct: 179 RVDADKNLLLVKGAVPGATGGD-VIVRLAVKA 209 >gi|169632350|ref|YP_001706086.1| 50S ribosomal protein L3 [Acinetobacter baumannii SDF] gi|226725117|sp|B0VQR8|RL3_ACIBS RecName: Full=50S ribosomal protein L3 gi|169151142|emb|CAO99814.1| 50S ribosomal protein L3 [Acinetobacter baumannii] Length = 212 Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY AVQV GE + Sbjct: 1 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFRV + + + VG FTVGQ+VDVTG + GKG Sbjct: 61 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+ Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VSVD +R +++VKG +PGA ++VR + K+ Sbjct: 181 VSVDTERSVLVVKGAIPGATGGD-VIVRPAIKA 212 >gi|261211151|ref|ZP_05925440.1| LSU ribosomal protein L3p (L3e) [Vibrio sp. RC341] gi|262166617|ref|ZP_06034354.1| LSU ribosomal protein L3p (L3e) [Vibrio mimicus VM223] gi|262170467|ref|ZP_06038145.1| LSU ribosomal protein L3p (L3e) [Vibrio mimicus MB-451] gi|262401883|ref|ZP_06078448.1| LSU ribosomal protein L3p (L3e) [Vibrio sp. RC586] gi|260839652|gb|EEX66263.1| LSU ribosomal protein L3p (L3e) [Vibrio sp. RC341] gi|261891543|gb|EEY37529.1| LSU ribosomal protein L3p (L3e) [Vibrio mimicus MB-451] gi|262026333|gb|EEY45001.1| LSU ribosomal protein L3p (L3e) [Vibrio mimicus VM223] gi|262351855|gb|EEZ00986.1| LSU ribosomal protein L3p (L3e) [Vibrio sp. RC586] Length = 209 Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 97/209 (46%), Positives = 135/209 (64%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV AG K V+K Sbjct: 3 GLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF GA Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQGA 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPGA + ++V+ + K+ Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|297567284|ref|YP_003686256.1| 50S ribosomal protein L3 [Meiothermus silvanus DSM 9946] gi|296851733|gb|ADH64748.1| 50S ribosomal protein L3 [Meiothermus silvanus DSM 9946] Length = 212 Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 101/215 (46%), Positives = 131/215 (60%), Gaps = 7/215 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ K+GMT V+ + R +PVTV+ C VV RT DK+GY AVQ+G K + V+K Sbjct: 3 GILGTKIGMTQVWKND-RAVPVTVILAGPCPVVQRRTPDKDGYEAVQLGFRPQKAQRVNK 61 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ V P + L E R P G + F G+ VDVTG + G+GF G Sbjct: 62 PLKGHFAKAGVEPVRYLKEIR-----GFSPEGDTVTVEIFAAGEKVDVTGTSKGRGFQGV 116 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR NF G ATHG HR GS G R+ PGRV+K KKMAGRMGG RVTV+NLEVV V Sbjct: 117 MKRWNFAGGNATHGAHKVHRHPGSIGNRKTPGRVYKGKKMAGRMGGERVTVQNLEVVDVV 176 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 + LILVKG VPGA + ++VR++ ++ G Sbjct: 177 PEENLILVKGAVPGA-NGTLVVVRETVRTPAKQGG 210 >gi|223041817|ref|ZP_03612007.1| 50S ribosomal protein L3 [Actinobacillus minor 202] gi|240947884|ref|ZP_04752324.1| 50S ribosomal protein L3 [Actinobacillus minor NM305] gi|223017386|gb|EEF15807.1| 50S ribosomal protein L3 [Actinobacillus minor 202] gi|240297846|gb|EER48282.1| 50S ribosomal protein L3 [Actinobacillus minor NM305] Length = 210 Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 98/209 (46%), Positives = 132/209 (63%), Gaps = 1/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV G K V+K Sbjct: 3 GLIGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDGYSAIQVTTGTKKASRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V + L+EFR + + +G + FT + VDVTG + GKGF G Sbjct: 63 PEAGHFVKAGVEAGRGLWEFRTEGETQEFTLGQEINVDIFTDVKKVDVTGTSKGKGFQGG 122 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV VD Sbjct: 123 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 182 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+LVKG VPGA NS ++V+ + K+ Sbjct: 183 AERKLLLVKGAVPGA-TNSDVIVKPAVKA 210 >gi|312793939|ref|YP_004026862.1| 50S ribosomal protein l3 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312877365|ref|ZP_07737330.1| 50S ribosomal protein L3 [Caldicellulosiruptor lactoaceticus 6A] gi|311795839|gb|EFR12203.1| 50S ribosomal protein L3 [Caldicellulosiruptor lactoaceticus 6A] gi|312181079|gb|ADQ41249.1| 50S ribosomal protein L3 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 210 Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 102/212 (48%), Positives = 133/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V++ GR IPVTV+ C VV +T++K+GY A+QVG + K Sbjct: 1 MTKGILGKKIGMTQVFDEAGRAIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+RG F+ V PK+ L E R+ KD D VG F G+ VDVTG++ KGF Sbjct: 61 LNKPLRGHFAKHGVKPKRFLRELRL-KDADKYEVGQEIRVDIFQPGERVDVTGISKAKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH +HG S+ HR GS G P R F KKM GRMGG RVTV NL+VV Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPG KNS +++RDS KS Sbjct: 179 KVDPERNLLLVKGSVPG-NKNSLLIIRDSVKS 209 >gi|295677932|ref|YP_003606456.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1002] gi|295437775|gb|ADG16945.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1002] Length = 219 Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 94/200 (47%), Positives = 126/200 (63%), Gaps = 1/200 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EF++ L G+V P F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVQAGEILKEFQIDAAKAAELSSGTVVGPELFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG +VTV+NLE+ Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDEKVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAK 199 +D R L+LVKG VPGAK Sbjct: 181 ARIDADRKLLLVKGAVPGAK 200 >gi|238879545|gb|EEQ43183.1| conserved hypothetical protein [Candida albicans WO-1] Length = 293 Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 104/222 (46%), Positives = 141/222 (63%), Gaps = 10/222 (4%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+ A K GM +N +G IP TVL +D+C+V+ ++ GY AV +G + K+KNV Sbjct: 66 RPGLFAIKRGMITWFNEKGEHIPATVLEVDSCEVLGYKLFKDFGYTAVIMGTID-KLKNV 124 Query: 62 --SKPMRGFFSSVNVSPKKKLFEFRVQKDDD-----LLPVGSVFSPSYFTVGQLVDVTGM 114 + +R F + VSPK+K+ EF+++ D+ L+PVG+ + YF+VGQ VDV G+ Sbjct: 125 KSTNDLR-IFETAKVSPKQKIGEFKIRSIDNDIESKLIPVGTELTADYFSVGQKVDVKGV 183 Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 T GKGF+G MKR F G RATHG S +HR+ G+TG Q+PGRVF KKM GRMG T Sbjct: 184 TKGKGFAGVMKRWGFSGGRATHGTSKAHRTPGATGGNQNPGRVFPGKKMPGRMGHQNNTG 243 Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 NLEV+ D + G+++VKG VPG KK S I V D+ K N Sbjct: 244 FNLEVLHTDGEAGILIVKGNVPGPKK-SIIKVSDAIKEYGNS 284 >gi|330940885|gb|EGH43842.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. pisi str. 1704B] Length = 211 Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 100/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG I VTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIAVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR+++ D G + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + ++VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209 >gi|330815249|ref|YP_004358954.1| 50S ribosomal protein L3 [Burkholderia gladioli BSR3] gi|327367642|gb|AEA58998.1| 50S ribosomal protein L3 [Burkholderia gladioli BSR3] Length = 216 Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 94/200 (47%), Positives = 126/200 (63%), Gaps = 1/200 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR+ L G++ P F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEVLKEFRIDAAKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RATHG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 121 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAK 199 +D +R L+LVKG +PGAK Sbjct: 181 ARIDAERKLLLVKGAIPGAK 200 >gi|304310016|ref|YP_003809614.1| 50S ribosomal protein L3 [gamma proteobacterium HdN1] gi|301795749|emb|CBL43948.1| 50S ribosomal protein L3 [gamma proteobacterium HdN1] Length = 212 Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 100/212 (47%), Positives = 136/212 (64%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V +K GMT ++N +G VTV+ +D +V + +++D++GY AVQV G K Sbjct: 1 MAIGLVGKKCGMTRIFNEDGSSTSVTVIEVDPNRVTLIKSVDRDGYSAVQVTTGVRKAST 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G FS V L+EFR D + L VG S F GQ VDVTG++ GKG Sbjct: 61 VNKAEAGLFSKAGVEAGSGLWEFRFPDDAAITLSVGDSVGVSIFEAGQAVDVTGVSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KR NF ATHG S+SHR+ GS G RQ PGRVFK KKM+G +G +VTV++L++ Sbjct: 121 FAGVVKRWNFRTQDATHGNSLSHRAPGSIGQRQTPGRVFKGKKMSGHLGDAQVTVQSLQL 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPGA N+ ++VR + K Sbjct: 181 VRVDVERNLLLVKGAVPGAAGNN-VIVRPALK 211 >gi|68474538|ref|XP_718642.1| likely mitochondrial ribosomal protein (E. coli L3) [Candida albicans SC5314] gi|46440421|gb|EAK99727.1| likely mitochondrial ribosomal protein (E. coli L3) [Candida albicans SC5314] Length = 293 Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 104/222 (46%), Positives = 141/222 (63%), Gaps = 10/222 (4%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+ A K GM +N +G IP TVL +D+C+V+ ++ GY AV +G + K+KNV Sbjct: 66 RPGLFAIKRGMITWFNEKGEHIPATVLEVDSCEVLGYKLFKDFGYTAVIMGTID-KLKNV 124 Query: 62 --SKPMRGFFSSVNVSPKKKLFEFRVQKDDD-----LLPVGSVFSPSYFTVGQLVDVTGM 114 + +R F + VSPK+K+ EF+++ D+ L+PVG+ + YF+VGQ VDV G+ Sbjct: 125 KSTNDLR-IFETAKVSPKQKIGEFKIRSIDNDIESKLIPVGTELTADYFSVGQKVDVKGV 183 Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 T GKGF+G MKR F G RATHG S +HR+ G+TG Q+PGRVF KKM GRMG T Sbjct: 184 TKGKGFAGVMKRWGFSGGRATHGTSKAHRTPGATGGNQNPGRVFPGKKMPGRMGHQNNTG 243 Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 NLEV+ D + G+++VKG VPG KK S I V D+ K N Sbjct: 244 FNLEVLHTDGEAGILIVKGNVPGPKK-SIIKVSDAIKEYGNS 284 >gi|94500993|ref|ZP_01307518.1| 50S ribosomal protein L3 [Oceanobacter sp. RED65] gi|94426933|gb|EAT11916.1| 50S ribosomal protein L3 [Oceanobacter sp. RED65] Length = 212 Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 101/218 (46%), Positives = 130/218 (59%), Gaps = 6/218 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V +K GMT V+ +G +PVTV+ + +V +T + +GY AVQV AG K Sbjct: 1 MALGLVGKKAGMTRVFTEDGASVPVTVIEVTPNRVTQVKTTETDGYNAVQVTAGSRKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK G F+ NV L EFR+++ D +G + F GQ+VDVTG + GKGF Sbjct: 61 VSKAEAGHFAKANVEAGDSLLEFRIEEVADF-NIGDELTVERFEAGQVVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF ATHG S+SHR+ GS G Q PGRV+K KKMAG MG RVT +NLE+V Sbjct: 120 QGGVKRWNFSTQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGHMGAARVTTQNLEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 VD + LILVKG +PGA I+ K AV +G Sbjct: 180 RVDAESNLILVKGALPGATGGQLII-----KPAVKARG 212 >gi|319787925|ref|YP_004147400.1| 50S ribosomal protein L3 [Pseudoxanthomonas suwonensis 11-1] gi|317466437|gb|ADV28169.1| 50S ribosomal protein L3 [Pseudoxanthomonas suwonensis 11-1] Length = 216 Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 98/211 (46%), Positives = 133/211 (63%), Gaps = 4/211 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK GM+ V+ +GR IPVT++ ++ +T++ +GY AVQV G + V+K Sbjct: 8 GLVGRKAGMSRVFTEDGRSIPVTLIEATPNRITQIKTVEADGYSAVQVTTGARRASLVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 P+ G ++ V + L+EFRV D+ + VG F VGQ+VDV G+T GKGF Sbjct: 68 PLAGHYAKAKVEAGRGLWEFRV-ADEKIGDFAVGGEIKADIFEVGQIVDVQGVTKGKGFQ 126 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNF ATHG S+SHR+ GS G RQ PGRVF KKMAG MG + + +NLEVV Sbjct: 127 GTIKRHNFTMGDATHGNSLSHRAPGSIGQRQTPGRVFPGKKMAGHMGAEQQSTQNLEVVR 186 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +RGLI V+G VPGA ++VR + K+ Sbjct: 187 VDAERGLIAVRGAVPGAPGGD-VIVRPASKA 216 >gi|331018160|gb|EGH98216.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 211 Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 99/212 (46%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR+++ + G + F GQLVDV G + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGE--YQAGDQINAEIFAAGQLVDVAGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + ++VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGN-LVVRPAAKA 209 >gi|302908346|ref|XP_003049847.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256730783|gb|EEU44134.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 333 Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 95/200 (47%), Positives = 130/200 (65%), Gaps = 2/200 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+GV+A K GMT V+ + R+P TVL LD QV+ ++T +KNGY AVQ+G+G +N Sbjct: 76 LRTGVLAIKKGMTSVF-VGKVRVPCTVLQLDQVQVIANKTREKNGYWAVQIGSGSRDGRN 134 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ PM G++ + ++PK L EF V+ LLPVG P +F GQ VDV + G GF Sbjct: 135 VTSPMLGYYEAKGIAPKADLAEFMVRDQSGLLPVGVQILPDWFKKGQYVDVKSRSRGMGF 194 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179 +G MKRH F G A+HG S +HR+ G+TG Q G RV KKM GRMG VTV+NL+V Sbjct: 195 AGGMKRHGFSGQEASHGNSKNHRTIGTTGPSQGGGSRVLPGKKMPGRMGNEFVTVQNLKV 254 Query: 180 VSVDDKRGLILVKGCVPGAK 199 + VD++ G++LV G + G K Sbjct: 255 MMVDNELGVVLVSGPIAGPK 274 >gi|225024790|ref|ZP_03713982.1| hypothetical protein EIKCOROL_01677 [Eikenella corrodens ATCC 23834] gi|224942497|gb|EEG23706.1| hypothetical protein EIKCOROL_01677 [Eikenella corrodens ATCC 23834] Length = 214 Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 101/212 (47%), Positives = 131/212 (61%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V+ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFTEQGVSVPVTVLEMSPNRVTQVKSKDTDGYAAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ L VG + + F GQ VDVTG + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLHEFALTEEKLAELKVGDEVTVAIFEAGQFVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRHNFG RA+HG S SHR GS G QDPGRVF K+MAG+ G TV+ LEV Sbjct: 121 FAGTIKRHNFGAQRASHGNSRSHRVPGSIGMNQDPGRVFPGKRMAGQYGNTTATVQRLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPGA N ++VR S K Sbjct: 181 VRVDAERNLLLVKGAVPGA-ANGDVVVRPSVK 211 >gi|53803548|ref|YP_114788.1| 50S ribosomal protein L3 [Methylococcus capsulatus str. Bath] gi|81823603|sp|Q605B2|RL3_METCA RecName: Full=50S ribosomal protein L3 gi|53757309|gb|AAU91600.1| ribosomal protein L3 [Methylococcus capsulatus str. Bath] Length = 211 Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 95/211 (45%), Positives = 130/211 (61%), Gaps = 1/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+H++ +VV +TL+ +GY A+QV G K Sbjct: 1 MAIGLVGRKCGMTHIFTDAGAAVPVTVIHVEPNRVVQVKTLESDGYRAIQVTTGSKKRSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++K G +S V + L+EFR++ D VG+ F GQ VD +IGKGF Sbjct: 61 LTKADAGHYSKAGVEAGRGLWEFRLEDSDQDYTVGTELGVGVFAEGQFVDARARSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNF ATHG S+SHR+ GS G Q PGRVFK K+MAG MG +TV NL +V Sbjct: 121 AGVVKRHNFRTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKRMAGHMGDKNITVPNLRIV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D +R L+LVKG VPG K + ++VR + K Sbjct: 181 GIDAERSLLLVKGAVPGT-KGADVIVRPAAK 210 >gi|239943577|ref|ZP_04695514.1| 50S ribosomal protein L3 [Streptomyces roseosporus NRRL 15998] gi|239990030|ref|ZP_04710694.1| 50S ribosomal protein L3 [Streptomyces roseosporus NRRL 11379] gi|291447044|ref|ZP_06586434.1| 50S ribosomal protein L3 [Streptomyces roseosporus NRRL 15998] gi|291349991|gb|EFE76895.1| 50S ribosomal protein L3 [Streptomyces roseosporus NRRL 15998] Length = 214 Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 98/210 (46%), Positives = 129/210 (61%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ KLGMT V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+K Sbjct: 7 GVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ +V+P++ L E R D +G + + F G VDVTG + GKGF+G Sbjct: 67 PLKGHFAKADVTPRRHLVELRT-PDASEYTLGQEVTAAVFESGVKVDVTGKSKGKGFAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL + +VD Sbjct: 126 MKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+KG VPG +LVR + K A Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214 >gi|219871730|ref|YP_002476105.1| 50S ribosomal protein L3 [Haemophilus parasuis SH0165] gi|254803675|sp|B8F755|RL3_HAEPS RecName: Full=50S ribosomal protein L3 gi|219691934|gb|ACL33157.1| 50S ribosomal protein L3 [Haemophilus parasuis SH0165] Length = 208 Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 100/209 (47%), Positives = 134/209 (64%), Gaps = 3/209 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT ++N +G IPVTV+ ++ +V +TL+ +GY AVQV G K V+K Sbjct: 3 GLVGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKASRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V + L+EFR + ++ +G + FT + VDVTG + GKGF G Sbjct: 63 PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFTDVKKVDVTGTSKGKGFQGG 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV VD Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 180 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+LVKG VPGA NS ++V+ + K+ Sbjct: 181 AERKLLLVKGSVPGA-TNSDVIVKPAVKA 208 >gi|163859273|ref|YP_001633571.1| 50S ribosomal protein L3 [Bordetella petrii DSM 12804] gi|212288248|sp|A9IJ01|RL3_BORPD RecName: Full=50S ribosomal protein L3 gi|163263001|emb|CAP45304.1| 50S ribosomal protein L3 [Bordetella petrii] Length = 233 Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 97/213 (45%), Positives = 132/213 (61%), Gaps = 3/213 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+V RK+GMT ++ EG IPVTVL + N +V ++L+ +GY AVQV G + V Sbjct: 16 RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQIKSLEADGYAAVQVAYGTRRASRV 75 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQ--KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++P G ++ L EFR+ + + P + S F GQ VDVTG TIGKG Sbjct: 76 AQPQTGHYAKAGTEAGSILKEFRLDPARLAEFTPGAVIAVESVFEAGQQVDVTGTTIGKG 135 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRH+FG RA+HG S SHR GS G QDPGR+F K+M+G +G TV+NL+V Sbjct: 136 FAGTIKRHHFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMSGHLGDVTRTVQNLDV 195 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +RGL+LVKG VPG ++VR + K+ Sbjct: 196 VRVDAERGLLLVKGAVPG-HAGGDVVVRPAIKA 227 >gi|167626039|ref|YP_001676333.1| 50S ribosomal protein L3 [Shewanella halifaxensis HAW-EB4] gi|189029480|sp|B0TM12|RL3_SHEHH RecName: Full=50S ribosomal protein L3 gi|167356061|gb|ABZ78674.1| ribosomal protein L3 [Shewanella halifaxensis HAW-EB4] Length = 212 Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 94/206 (45%), Positives = 128/206 (62%), Gaps = 1/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++N +G +PVTV+ + +V RTLD +GY A+QV G K Sbjct: 1 MAIGLIGRKVGMTRIFNEDGASVPVTVIEIAANRVTQVRTLDTDGYRALQVTTGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G F+ V + L+E R+ + + + VG+ + F VDVTG + GKG Sbjct: 61 ITKPEAGHFAKAGVEAGRGLWEMRLADGEGEGIEVGAELNVDIFADIAKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S++HRS+GS G Q PGRVFK KKM+G MG RVT +NLEV Sbjct: 121 FQGGIKRWNFAMQDATHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205 + VD +R L+LVKG VPGA I+ Sbjct: 181 IRVDAERNLLLVKGAVPGATNGDLII 206 >gi|295111422|emb|CBL28172.1| LSU ribosomal protein L3P [Synergistetes bacterium SGP1] Length = 207 Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 93/207 (44%), Positives = 132/207 (63%), Gaps = 1/207 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT +++ EG+ + VTV+ C VV RT ++NGY AV +G G K Sbjct: 1 MGIGILGKKMGMTQIFDAEGQAVAVTVIAAGPCPVVAVRTPEQNGYSAVLLGFGAVKPHK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SKP++G F V PK+ L EFR+ K + VG F G+ +DV+G++ GKGF Sbjct: 61 LSKPVKGLFDKNKVEPKRTLREFRLDKAEGY-EVGQEIRVDLFEAGERIDVSGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR++FGG + +HG S+ HR GS+G PGRVF K+M G MG ++VTVKNL V+ Sbjct: 120 AGVMKRYHFGGQQFSHGTSVEHRHGGSSGAISYPGRVFPGKRMPGHMGSDKVTVKNLTVM 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207 +VD + L+LVKG VPGAK L + Sbjct: 180 AVDLENNLLLVKGAVPGAKDGLVALYK 206 >gi|260549840|ref|ZP_05824056.1| 50S ribosomal protein L3 [Acinetobacter sp. RUH2624] gi|260407090|gb|EEX00567.1| 50S ribosomal protein L3 [Acinetobacter sp. RUH2624] Length = 214 Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 97/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY AVQV GE + Sbjct: 3 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 62 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFRV + + + VG FTVGQ+VDVTG + GKG Sbjct: 63 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+ Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VS+D +R +++VKG +PGA ++VR + K+ Sbjct: 183 VSIDAERSVLVVKGAIPGATGGD-VIVRPTIKA 214 >gi|284034002|ref|YP_003383933.1| 50S ribosomal protein L3 [Kribbella flavida DSM 17836] gi|283813295|gb|ADB35134.1| ribosomal protein L3 [Kribbella flavida DSM 17836] Length = 218 Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 94/210 (44%), Positives = 128/210 (60%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT ++ R +PVTV+ C V RT +GY VQ+ G+ + V+K Sbjct: 9 GLLGTKLGMTQTWDENNRVVPVTVIQAGPCVVTEVRTSASHGYDGVQIAFGDIDPRKVTK 68 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+RG F V+P++ L E R D +G F G++VDV+ + GKGF+G Sbjct: 69 PLRGHFEKAGVTPRRHLLELRTA-DASEYTLGQEIKAEAFAAGEVVDVSATSKGKGFAGV 127 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GLRATHGV HRS GS G PGRVFK +MAGRMG +VT +N++V ++D Sbjct: 128 MKRHGFHGLRATHGVHKKHRSPGSIGGCATPGRVFKGLRMAGRMGNEQVTTQNVKVHAID 187 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +RGLIL+KG VPG K +L+R++ K A Sbjct: 188 AERGLILIKGAVPGP-KGGLVLIRNAAKGA 216 >gi|110833258|ref|YP_692117.1| 50S ribosomal protein L3 [Alcanivorax borkumensis SK2] gi|123149718|sp|Q0VSK3|RL3_ALCBS RecName: Full=50S ribosomal protein L3 gi|110646369|emb|CAL15845.1| 50S ribosomal protein L3 [Alcanivorax borkumensis SK2] Length = 211 Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 98/212 (46%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GV+ RK GMT V+ EG +PVTV+ + +V +T + +GY AVQV GE + Sbjct: 1 MAIGVIGRKCGMTRVFTEEGVSVPVTVIEVGPNRVSQVKTEESDGYQAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ V + ++EFR + + GS + F GQ++DVTG + GKGF Sbjct: 61 VTKAQAGHFAKAGVEAGRGVWEFRAEAGE--FEAGSSVTVEGFEAGQMIDVTGTSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF ATHG S+SHR+ GS G Q PGRVFK KKMAG +G RVTV+NLEVV Sbjct: 119 AGGVKRWNFSTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHLGAERVTVQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + L+LVKG VPGA ++VR + K+ Sbjct: 179 RVDADKNLLLVKGAVPGATGGD-VIVRLAVKA 209 >gi|225560374|gb|EEH08655.1| 50S ribosomal protein L3 [Ajellomyces capsulatus G186AR] Length = 301 Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 90/201 (44%), Positives = 135/201 (67%), Gaps = 2/201 (0%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GMT ++++E G+RIP T+L LD QV+ H+TL KNGY AVQ+G G + Sbjct: 71 LRTGTLAIKKGMTAIFDLETGKRIPCTILQLDRVQVISHKTLRKNGYYAVQIGCGWKHER 130 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V++PM G F++ V+PK+ + EFRV+ ++ LLP+G + + ++F GQ VD + G G Sbjct: 131 AVTRPMLGHFAANGVAPKRHIHEFRVKDENGLLPIGEMINANWFQEGQYVDARSNSRGMG 190 Query: 120 FSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKRH F G +HGVS++HR S + RV+ KKMAG MG +VT++NL+ Sbjct: 191 FAGVMKRHGFHGQDRSHGVSLTHRSMGSSGPGQGGGSRVYPGKKMAGNMGNKQVTLQNLK 250 Query: 179 VVSVDDKRGLILVKGCVPGAK 199 V+ VD ++G+++V G V G K Sbjct: 251 VLKVDAEKGIVVVNGSVSGPK 271 >gi|91229293|ref|ZP_01262910.1| 50S ribosomal protein L3 [Vibrio alginolyticus 12G01] gi|262392516|ref|YP_003284370.1| 50S ribosomal protein L3p [Vibrio sp. Ex25] gi|269964734|ref|ZP_06178972.1| 50S ribosomal protein L3 [Vibrio alginolyticus 40B] gi|91187418|gb|EAS73766.1| 50S ribosomal protein L3 [Vibrio alginolyticus 12G01] gi|262336110|gb|ACY49905.1| LSU ribosomal protein L3p (L3e) [Vibrio sp. Ex25] gi|269830633|gb|EEZ84854.1| 50S ribosomal protein L3 [Vibrio alginolyticus 40B] Length = 209 Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 97/209 (46%), Positives = 134/209 (64%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ EG IPVTV+ ++ +V +TL+ +GY A+QV AG K V+K Sbjct: 3 GLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF GA Sbjct: 63 AEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGSELTVELFNETKKVDVTGTSKGKGFQGA 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPGA + ++V+ + K+ Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|308446847|ref|XP_003087274.1| hypothetical protein CRE_26933 [Caenorhabditis remanei] gi|308258134|gb|EFP02087.1| hypothetical protein CRE_26933 [Caenorhabditis remanei] Length = 218 Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 94/210 (44%), Positives = 131/210 (62%), Gaps = 1/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ G+ +PVTV+ + V RT + +GY AVQ+ AG+ + V++ Sbjct: 10 GLLGTKLGMTQVWDENGKVVPVTVIEVAPNVVTQIRTAEVDGYSAVQIAAGQIDPRKVNQ 69 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V+P++ L E R D + F GQ +DV G + GKGF+G Sbjct: 70 PTAGHFAKAGVTPRRHLTEVRTADAADYSLGQELTIDGTFEAGQKIDVVGTSKGKGFAGV 129 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF G+ A+HG +HR GS G PGRVFK ++MAGRMGG RVTV+NL V +VD Sbjct: 130 MKRHNFSGVSASHGAHRNHRKPGSIGGAATPGRVFKGQRMAGRMGGERVTVQNLTVHAVD 189 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GLIL+KG VPGA + + VR++ K A Sbjct: 190 AEKGLILIKGAVPGA-RGRLVFVRNAVKGA 218 >gi|157960014|ref|YP_001500048.1| 50S ribosomal protein L3 [Shewanella pealeana ATCC 700345] gi|189029481|sp|A8GYX6|RL3_SHEPA RecName: Full=50S ribosomal protein L3 gi|157845014|gb|ABV85513.1| ribosomal protein L3 [Shewanella pealeana ATCC 700345] Length = 212 Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 93/206 (45%), Positives = 128/206 (62%), Gaps = 1/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++N +G +PVTV+ + +V RTLD +GY A+QV G K Sbjct: 1 MAIGLIGRKVGMTRIFNEDGASVPVTVIEIAANRVTQVRTLDTDGYRALQVTTGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G F+ V + L+E R+ + + + VG+ + F VDVTG + GKG Sbjct: 61 ITKPEAGHFAKAGVEAGRGLWEMRLADGEGEGIEVGAELNVDIFADIAKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S++HR++GS G Q PGRVFK KKM+G MG RVT +NLEV Sbjct: 121 FQGGIKRWNFATQDATHGNSLAHRANGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205 + VD +R L+LVKG VPGA I+ Sbjct: 181 IRVDAERNLLLVKGAVPGATNGDLII 206 >gi|221201565|ref|ZP_03574603.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD2M] gi|221207360|ref|ZP_03580370.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD2] gi|221213498|ref|ZP_03586473.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD1] gi|254253517|ref|ZP_04946835.1| Ribosomal protein L3 [Burkholderia dolosa AUO158] gi|124896126|gb|EAY70006.1| Ribosomal protein L3 [Burkholderia dolosa AUO158] gi|221166950|gb|EED99421.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD1] gi|221172948|gb|EEE05385.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD2] gi|221178381|gb|EEE10790.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD2M] Length = 220 Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 93/200 (46%), Positives = 127/200 (63%), Gaps = 1/200 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTV+ + + +V +T++ +GY AVQV G + Sbjct: 5 MSLGLVGRKVGMTRIFTAEGDSIPVTVVDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 64 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR+ L G++ P F VGQ VDV G++IGKG Sbjct: 65 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 124 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 125 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 184 Query: 180 VSVDDKRGLILVKGCVPGAK 199 +D +R L+LVKG +PGAK Sbjct: 185 ARIDAERKLLLVKGAIPGAK 204 >gi|58584599|ref|YP_198172.1| 50S ribosomal protein L3 [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418915|gb|AAW70930.1| Ribosomal protein L3 [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 241 Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 99/215 (46%), Positives = 141/215 (65%), Gaps = 6/215 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ +G T +Y+ R+ VT+LHL +V R DK GY +V +G G KN+ Sbjct: 9 RIGLLMTNIGHTAIYS-NNSRVAVTLLHLSETYIVDVRRQDKCGYNSVILGIGN--FKNI 65 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP + + +S + KL+E R+ D + G ++F VGQ +D+T +IGKGF+ Sbjct: 66 AKPQLEYLKKMGISNRCKLYESRLS-DLSGIECGKKVGVNHFVVGQYLDITSYSIGKGFA 124 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF GLRA+HGVSI+HRS GSTG QDPGRVFK K+MAG +G +RVTV+N+E++S Sbjct: 125 GVMKRHNFCGLRASHGVSIAHRSQGSTGQCQDPGRVFKGKRMAGHLGSSRVTVQNMEILS 184 Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVN 215 +D I+VKG VPG KNS++ V+D+ K ++ Sbjct: 185 IDHGNSTIVVKGNNVPGF-KNSYVFVKDAIKKPLH 218 >gi|325088644|gb|EGC41954.1| 50S ribosomal protein [Ajellomyces capsulatus H88] Length = 301 Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 90/201 (44%), Positives = 135/201 (67%), Gaps = 2/201 (0%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GMT ++++E G+RIP T+L LD QV+ H+TL KNGY AVQ+G G + Sbjct: 71 LRTGTLAIKKGMTAIFDLETGKRIPCTILQLDRVQVISHKTLKKNGYYAVQIGCGWKHER 130 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V++PM G F++ V+PK+ + EFRV+ ++ LLP+G + + ++F GQ VD + G G Sbjct: 131 AVTRPMLGHFAANGVAPKRHIHEFRVKDENGLLPIGEMINANWFQEGQYVDARSNSRGMG 190 Query: 120 FSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKRH F G +HGVS++HR S + RV+ KKMAG MG +VT++NL+ Sbjct: 191 FAGVMKRHGFHGQDRSHGVSLTHRSMGSSGPGQGGGSRVYPGKKMAGNMGNKQVTLQNLK 250 Query: 179 VVSVDDKRGLILVKGCVPGAK 199 V+ VD ++G+++V G V G K Sbjct: 251 VLKVDAEKGIVVVNGNVSGPK 271 >gi|320009102|gb|ADW03952.1| 50S ribosomal protein L3 [Streptomyces flavogriseus ATCC 33331] Length = 214 Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 98/210 (46%), Positives = 129/210 (61%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ KLGMT V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+K Sbjct: 7 GVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 67 PLKGHFAKADVTPRRHLVELRT-PDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF GL A HGV HRS GS G PGRVFK +MAGRMG RVT +NL + +VD Sbjct: 126 MKRHNFKGLGAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+KG VPG +LVR + K A Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214 >gi|152998271|ref|YP_001343106.1| 50S ribosomal protein L3 [Marinomonas sp. MWYL1] gi|189042850|sp|A6W392|RL3_MARMS RecName: Full=50S ribosomal protein L3 gi|150839195|gb|ABR73171.1| ribosomal protein L3 [Marinomonas sp. MWYL1] Length = 212 Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 95/201 (47%), Positives = 128/201 (63%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 +V RK GMT ++ +G +PVTV+ ++ +V +T + +GY AVQV G + V+K Sbjct: 5 LVGRKAGMTRIFTEDGVSVPVTVIEVEPNRVTQVKTAETDGYQAVQVTVGSRRSSRVNKA 64 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G ++ NV + L+EFR+ D+ + VG + + F Q+VDVTG + GKGF GA+ Sbjct: 65 AAGHYAKANVEAGRGLWEFRLAGDEKEINVGDELTVADFESIQMVDVTGQSKGKGFQGAI 124 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHNF ATHG S+SHR+ GS G Q PGRV+K KKMAG MG +VT ++LEVV VD Sbjct: 125 KRHNFSMQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGHMGAAQVTTQSLEVVRVDT 184 Query: 185 KRGLILVKGCVPGAKKNSWIL 205 +R LILVKG VPGA IL Sbjct: 185 ERNLILVKGAVPGAVNGDVIL 205 >gi|119947126|ref|YP_944806.1| ribosomal protein L3 [Psychromonas ingrahamii 37] gi|166233184|sp|A1T0E2|RL3_PSYIN RecName: Full=50S ribosomal protein L3 gi|119865730|gb|ABM05207.1| LSU ribosomal protein L3P [Psychromonas ingrahamii 37] Length = 212 Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 102/213 (47%), Positives = 133/213 (62%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ +G IPVTVL +V +TLD +GY A+QV AG K Sbjct: 1 MTIGLIGRKVGMTRVFTEDGVSIPVTVLECSPNRVTQVKTLDTDGYQALQVTAGSKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP G F+ V + L+EF + ++ + VG+ S F VDVTG + GKG Sbjct: 61 VNKPEAGHFAKAGVEAGRGLWEFTLADNEGADIKVGAELSVELFNEINKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F GA+KR NF ATHG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLEV Sbjct: 121 FQGAIKRWNFSMQDATHGNSVSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LVKG V GA KN ++++ + K+ Sbjct: 181 VRVDIERNLLLVKGAVAGA-KNGDVIIKPAVKA 212 >gi|312127226|ref|YP_003992100.1| 50S ribosomal protein l3 [Caldicellulosiruptor hydrothermalis 108] gi|311777245|gb|ADQ06731.1| 50S ribosomal protein L3 [Caldicellulosiruptor hydrothermalis 108] Length = 210 Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 102/212 (48%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V++ GR IPVTV+ C VV +T++K+GY A+QVG + K Sbjct: 1 MTKGILGKKIGMTQVFDEAGRAIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+RG F+ V PK+ L E R+ KD D VG F G+ VDVTG++ KGF Sbjct: 61 LNKPLRGHFAKHGVKPKRFLRELRL-KDADKYEVGQEIRVDIFQPGERVDVTGISKAKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH +HG S+ HR GS G P R F KKM GRMGG RVTV NL+VV Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD R L+LVKG VPG KNS +++RDS KS Sbjct: 179 KVDPDRNLLLVKGSVPG-NKNSLLIIRDSVKS 209 >gi|293610824|ref|ZP_06693124.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827168|gb|EFF85533.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 212 Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 97/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY AVQV GE + Sbjct: 1 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFRV + + + VG FTVGQ+VDVTG + GKG Sbjct: 61 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQVVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+ Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VS+D +R +++VKG +PGA ++VR + K+ Sbjct: 181 VSIDAERSVLVVKGAIPGATGGD-VIVRPTIKA 212 >gi|282860810|ref|ZP_06269876.1| ribosomal protein L3 [Streptomyces sp. ACTE] gi|282564546|gb|EFB70082.1| ribosomal protein L3 [Streptomyces sp. ACTE] Length = 214 Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 98/210 (46%), Positives = 129/210 (61%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ KLGMT V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+K Sbjct: 7 GVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 67 PLKGHFAKADVTPRRHLVELRT-PDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF GL A HGV HRS GS G PGRVFK +MAGRMG RVT +NL + +VD Sbjct: 126 MKRHNFKGLGAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+KG VPG +LVR + K A Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214 >gi|182436627|ref|YP_001824346.1| 50S ribosomal protein L3 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326777249|ref|ZP_08236514.1| 50S ribosomal protein L3 [Streptomyces cf. griseus XylebKG-1] gi|226730571|sp|B1W407|RL3_STRGG RecName: Full=50S ribosomal protein L3 gi|178465143|dbj|BAG19663.1| putative 50S ribosomal protein L3 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326657582|gb|EGE42428.1| 50S ribosomal protein L3 [Streptomyces cf. griseus XylebKG-1] Length = 214 Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 98/210 (46%), Positives = 128/210 (60%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ KLGMT V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+K Sbjct: 7 GVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 67 PLKGHFAKADVTPRRHLVELRTP-DASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL + +VD Sbjct: 126 MKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+KG VPG +LVR + K A Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214 >gi|161523429|ref|YP_001578441.1| 50S ribosomal protein L3 [Burkholderia multivorans ATCC 17616] gi|189351798|ref|YP_001947426.1| 50S ribosomal protein L3 [Burkholderia multivorans ATCC 17616] gi|226725141|sp|A9ADJ3|RL3_BURM1 RecName: Full=50S ribosomal protein L3 gi|160340858|gb|ABX13944.1| ribosomal protein L3 [Burkholderia multivorans ATCC 17616] gi|189335820|dbj|BAG44890.1| large subunit ribosomal protein L3 [Burkholderia multivorans ATCC 17616] Length = 216 Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 93/200 (46%), Positives = 127/200 (63%), Gaps = 1/200 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTV+ + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVVDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR+ L G++ P F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAK 199 +D +R L+LVKG +PGAK Sbjct: 181 ARIDAERKLLLVKGAIPGAK 200 >gi|312622045|ref|YP_004023658.1| 50S ribosomal protein l3 [Caldicellulosiruptor kronotskyensis 2002] gi|312202512|gb|ADQ45839.1| 50S ribosomal protein L3 [Caldicellulosiruptor kronotskyensis 2002] Length = 210 Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT +++ GR IPVTV+ C VV +T++K+GY A+QVG + K Sbjct: 1 MTKGILGKKIGMTQIFDEAGRAIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+RG F+ V PK+ L E R+ KD D VG F G+ VDVTG++ KGF Sbjct: 61 LNKPLRGHFAKHGVKPKRFLRELRL-KDADKYEVGQEIRVDIFQPGERVDVTGISKAKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH +HG S+ HR GS G P R F KKM GRMGG RVTV NL+VV Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD R L+LVKG VPG KNS +++RDS KS Sbjct: 179 KVDPDRNLLLVKGSVPG-NKNSLLIIRDSVKS 209 >gi|257069508|ref|YP_003155763.1| 50S ribosomal protein L3P [Brachybacterium faecium DSM 4810] gi|256560326|gb|ACU86173.1| LSU ribosomal protein L3P [Brachybacterium faecium DSM 4810] Length = 226 Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 96/210 (45%), Positives = 132/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SGV+ KLGMT V++ G+ +PVTV+ V R+++ +GY AVQ+ G+ + VS Sbjct: 14 SGVLGTKLGMTQVWDENGKLVPVTVVQTGANVVTQIRSVETDGYDAVQIAFGQIDPRKVS 73 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 +P+RG F V+P++ L E R + +G S F GQ VDV G + GKG +G Sbjct: 74 QPLRGHFEKAGVTPRRHLVELRTVNAAEYT-LGQEIDASVFEAGQKVDVVGTSKGKGTAG 132 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G PGRVFK ++MAGRMGG+R +V+NL V +V Sbjct: 133 VMKRHGFAGVGASHGQHRNHRKPGSIGGASTPGRVFKGQRMAGRMGGDRTSVQNLTVHAV 192 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D ++GL+LVKG VPGA K +LVR + KS Sbjct: 193 DVEKGLVLVKGAVPGA-KGGLVLVRSAVKS 221 >gi|313903151|ref|ZP_07836545.1| LSU ribosomal protein L3P [Thermaerobacter subterraneus DSM 13965] gi|313466653|gb|EFR62173.1| LSU ribosomal protein L3P [Thermaerobacter subterraneus DSM 13965] Length = 217 Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 98/210 (46%), Positives = 134/210 (63%), Gaps = 3/210 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RKLGMT +++ EGR +PVTV+ C VV RT +++GY AVQ+G GE K + Sbjct: 1 MGVGLLGRKLGMTQIFDDEGRAVPVTVIQAGPCVVVQTRTQERDGYRAVQLGFGEIKPRK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP-VGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KPM G F+ V+P + L EFR++ + + +P VG + F G+ VDVTG + GKG Sbjct: 61 VNKPMAGHFARAGVNPVRVLREFRLEGEGEPMPEVGQQLTVELFKAGEYVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G + RH FG +HG S HR GS PGRVFK ++MAGR G RVTV+ L+V Sbjct: 121 FLGPVARHGFGRGPMSHG-SKYHRGPGSLAPSTFPGRVFKGRRMAGRTGNRRVTVRGLQV 179 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 V VD +R L+LVKG VPG + S + +R + Sbjct: 180 VRVDPERNLLLVKGAVPGP-RGSVVAIRKT 208 >gi|222529730|ref|YP_002573612.1| 50S ribosomal protein L3 [Caldicellulosiruptor bescii DSM 6725] gi|254803649|sp|B9MKI1|RL3_ANATD RecName: Full=50S ribosomal protein L3 gi|222456577|gb|ACM60839.1| ribosomal protein L3 [Caldicellulosiruptor bescii DSM 6725] Length = 210 Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT +++ GR IPVTV+ C VV +T++K+GY A+QVG + K Sbjct: 1 MTKGILGKKIGMTQIFDEAGRAIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+RG F+ V PK+ L E R+ KD D VG F G+ VDVTG++ KGF Sbjct: 61 LNKPLRGHFAKHGVKPKRFLRELRL-KDADKYEVGQEIRVDIFQPGEKVDVTGISKAKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH +HG S+ HR GS G P R F KKM GRMGG RVTV NL+VV Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD R L+LVKG VPG KNS +++RDS KS Sbjct: 179 KVDPDRNLLLVKGSVPG-NKNSLLIIRDSVKS 209 >gi|167854921|ref|ZP_02477697.1| 50S ribosomal protein L3 [Haemophilus parasuis 29755] gi|167853988|gb|EDS25226.1| 50S ribosomal protein L3 [Haemophilus parasuis 29755] Length = 208 Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 99/209 (47%), Positives = 134/209 (64%), Gaps = 3/209 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT ++N +G +PVTV+ ++ +V +TL+ +GY AVQV G K V+K Sbjct: 3 GLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKASRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V + L+EFR + ++ +G + FT + VDVTG + GKGF G Sbjct: 63 PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFTDVKKVDVTGTSKGKGFQGG 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV VD Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 180 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+LVKG VPGA NS ++V+ + K+ Sbjct: 181 AERKLLLVKGSVPGA-TNSDVIVKPAVKA 208 >gi|319411891|emb|CBQ73934.1| related to MRPL9-mitochondrial ribosomal protein, large subunit [Sporisorium reilianum] Length = 378 Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 104/206 (50%), Positives = 129/206 (62%), Gaps = 8/206 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH----RTLDKNGYMAVQVGAGEA 56 R G++A K GMT + G RIP TVL + QV H ++ Y A+QV A + Sbjct: 96 QRVGLIAVKRGMTSFFLPNGERIPATVLQVHTNQVSAHIGFGPDATESTYTALQVAAVDT 155 Query: 57 KVKN-VSKPMRGFFSSVNVSPKKKLF-EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGM 114 K N V+K +RG + +S KK+ EFRV D L+P+G+ S +F GQ +DV + Sbjct: 156 KSINLVTKQIRGHLKTAGISRGKKIIREFRV-SSDALVPLGTQLSAVHFVPGQSIDVRAI 214 Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV-T 173 T G GF G MKRH F GLRA+HGVSISHRSHGSTG QDPGRV+ KMAGRMGGN+ + Sbjct: 215 TRGHGFQGVMKRHGFHGLRASHGVSISHRSHGSTGANQDPGRVWPGTKMAGRMGGNKHGS 274 Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAK 199 + NL VV VD K+ LI VKG VPG K Sbjct: 275 IHNLLVVRVDAKKDLIYVKGNVPGPK 300 >gi|146297285|ref|YP_001181056.1| 50S ribosomal protein L3 [Caldicellulosiruptor saccharolyticus DSM 8903] gi|166233129|sp|A4XLT0|RL3_CALS8 RecName: Full=50S ribosomal protein L3 gi|145410861|gb|ABP67865.1| LSU ribosomal protein L3P [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 210 Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 100/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V++ G+ +PVTV+ C VV +T++K+GY A+QVG + K Sbjct: 1 MTKGILGKKIGMTQVFDEAGKVVPVTVIEAGPCVVVQKKTVEKDGYAAIQVGFEDIKETK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+RG F+ V PK+ L E R+ KD D VG F+ G+ VDVTG++ KGF Sbjct: 61 LNKPLRGHFAKHGVKPKRYLRELRL-KDADKYEVGQEIRVDIFSPGERVDVTGISKAKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH +HG S+ HR GS G P R F KKM GRMGG RVTV NL+VV Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGQRVTVLNLQVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPG KNS +++RDS KS Sbjct: 179 KVDPERNLLLVKGSVPG-NKNSLLIIRDSVKS 209 >gi|50086215|ref|YP_047725.1| 50S ribosomal protein L3 [Acinetobacter sp. ADP1] gi|81827372|sp|Q6F7R2|RL3_ACIAD RecName: Full=50S ribosomal protein L3 gi|49532191|emb|CAG69903.1| 50S ribosomal protein L3 [Acinetobacter sp. ADP1] Length = 212 Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY AVQV GE + Sbjct: 1 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFRV + + + +G FTVGQ+VDVTG + GKG Sbjct: 61 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+ Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VS+D +R +++VKG +PGA ++VR + K+ Sbjct: 181 VSIDAERSVLVVKGAIPGATGGD-VIVRPTIKA 212 >gi|56477594|ref|YP_159183.1| 50S ribosomal protein L3 [Aromatoleum aromaticum EbN1] gi|81821104|sp|Q5P332|RL3_AZOSE RecName: Full=50S ribosomal protein L3 gi|56313637|emb|CAI08282.1| 50S ribosomal protein L3 [Aromatoleum aromaticum EbN1] Length = 214 Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 100/213 (46%), Positives = 131/213 (61%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +GR +PVTVL + N +V +T + +GY AVQV G+ + Sbjct: 1 MSLGLVGRKVGMTRIFAEDGRSVPVTVLDVSNNRVTQIKTPESDGYAAVQVTFGKRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V KP+ G + V L EFRV+ + G V F VGQ VDVTG +IGKG Sbjct: 61 VGKPLAGHLAKAGVEAGHMLKEFRVETEQVAGFKAGDVVGVDLFAVGQKVDVTGTSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG KRHNF RA+HG S+SH + GS G QDPGRVF K+MAG+ G T + LEV Sbjct: 121 FSGVGKRHNFSSNRASHGNSVSHNAPGSIGMAQDPGRVFPGKRMAGQYGNTTCTTQGLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LVKG VPG+K ++VR + K+ Sbjct: 181 VRVDVERQLLLVKGAVPGSKGGD-VIVRPAVKA 212 >gi|254283460|ref|ZP_04958428.1| ribosomal protein L3 [gamma proteobacterium NOR51-B] gi|219679663|gb|EED36012.1| ribosomal protein L3 [gamma proteobacterium NOR51-B] Length = 211 Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 98/206 (47%), Positives = 127/206 (61%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT V+ EG +PVTV+ + +V + LD +GY A+QV AG+ K Sbjct: 1 MTIGVVGRKSGMTRVFTDEGVSVPVTVVEIAPNRVTQLKDLDTDGYRAIQVTAGDRKASK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS+ G F+ V+ L+EFR+ ++ +G+ + F GQ VDV G + GKGF Sbjct: 61 VSRAEAGHFAKAGVAAGNGLWEFRLDGSEEQFEIGAELTVERFEQGQKVDVCGQSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR NF ATHG S+SHR+ GS G Q PGRVFK KKMAG MG RVT + LEVV Sbjct: 121 QGAVKRWNFRMQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQGLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 VD +R L+L+KG VPGA I++ Sbjct: 181 RVDVERNLLLIKGAVPGAPGGDVIVL 206 >gi|323492119|ref|ZP_08097281.1| 50S ribosomal protein L3 [Vibrio brasiliensis LMG 20546] gi|323313680|gb|EGA66782.1| 50S ribosomal protein L3 [Vibrio brasiliensis LMG 20546] Length = 209 Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 96/209 (45%), Positives = 134/209 (64%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ EG IPVTV+ ++ +V +TL+ +GY A+QV G K VSK Sbjct: 3 GLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGAKKANRVSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF GA Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGAELTVELFNDTKKVDVTGTSKGKGFQGA 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPG+ + ++V+ + K+ Sbjct: 182 AERNLLLIKGAVPGSTGGN-VIVKPAVKA 209 >gi|312884703|ref|ZP_07744404.1| 50S ribosomal protein L3 [Vibrio caribbenthicus ATCC BAA-2122] gi|309367616|gb|EFP95167.1| 50S ribosomal protein L3 [Vibrio caribbenthicus ATCC BAA-2122] Length = 209 Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 96/209 (45%), Positives = 134/209 (64%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ EG IPVTV+ ++ +V +TL+ +GY A+QV G K V+K Sbjct: 3 GLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF GA Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNDTKKVDVTGTSKGKGFQGA 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPG+ + ++V+ + K+ Sbjct: 182 AERNLLLIKGAVPGSTGGN-VIVKPAVKA 209 >gi|91785465|ref|YP_560671.1| 50S ribosomal protein L3 [Burkholderia xenovorans LB400] gi|187925616|ref|YP_001897258.1| 50S ribosomal protein L3 [Burkholderia phytofirmans PsJN] gi|296163321|ref|ZP_06846082.1| 50S ribosomal protein L3 [Burkholderia sp. Ch1-1] gi|123062494|sp|Q13TH0|RL3_BURXL RecName: Full=50S ribosomal protein L3 gi|226725143|sp|B2T751|RL3_BURPP RecName: Full=50S ribosomal protein L3 gi|91689419|gb|ABE32619.1| LSU ribosomal protein L3P [Burkholderia xenovorans LB400] gi|187716810|gb|ACD18034.1| ribosomal protein L3 [Burkholderia phytofirmans PsJN] gi|295886460|gb|EFG66317.1| 50S ribosomal protein L3 [Burkholderia sp. Ch1-1] Length = 219 Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 94/200 (47%), Positives = 126/200 (63%), Gaps = 1/200 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGTRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EF++ L G+V P F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVQAGEILKEFQIDAAKAAELSNGTVVGPDLFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG + VTV+NLE+ Sbjct: 121 YAGTIKRYNFASGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDDTVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAK 199 +D R L+LVKG VPGAK Sbjct: 181 ARIDADRKLLLVKGAVPGAK 200 >gi|90417569|ref|ZP_01225487.1| Ribosomal protein L3 [marine gamma proteobacterium HTCC2207] gi|90330590|gb|EAS45886.1| Ribosomal protein L3 [marine gamma proteobacterium HTCC2207] Length = 211 Score = 177 bits (450), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 94/212 (44%), Positives = 129/212 (60%), Gaps = 1/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT V+ +G IPVTV+ V ++++ +GY A+Q+ G K Sbjct: 1 MSIGIVGRKCGMTRVFTEDGVSIPVTVVEATPNHVTQIKSVETDGYSAIQITTGSRKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK G ++ V + +EFR + D VG + F GQ+VDVTG + GKGF Sbjct: 61 VSKAQAGHYAKAGVEAGRGQWEFRTEGSSDDFAVGGSLTVERFEAGQMVDVTGTSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG+MG +VT +NLE+V Sbjct: 121 QGGVKRWNFAMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNAQVTTQNLEIV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA + ++VR + K+ Sbjct: 181 RVDAERNLLLIKGAVPGAPGGN-VVVRPAVKA 211 >gi|254492312|ref|ZP_05105485.1| ribosomal protein L3 [Methylophaga thiooxidans DMS010] gi|224462484|gb|EEF78760.1| ribosomal protein L3 [Methylophaga thiooxydans DMS010] Length = 210 Score = 177 bits (450), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 96/212 (45%), Positives = 138/212 (65%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK GMT V++ +G PVTV+ ++ +V +T+D +GY A+QV GE K Sbjct: 1 MTIGLIGRKRGMTRVFSEDGVSTPVTVIEVEPNRVSQLKTVDTDGYNAIQVTVGERKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP G F+ + +K+ EFRV++ +L VG+ F GQ +DV+G+T GKGF Sbjct: 61 VTKPEAGHFAKAQAAAGRKVAEFRVEEVSEL-EVGAELKVDLFENGQQIDVSGITKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR+ F G ATHG S+SHR+ GS G Q PGRVFK KKMAG MG + T++NL +V Sbjct: 120 AGVVKRYGFRGGDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGDKKRTLQNLSIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA S +++R + K+ Sbjct: 180 KVDAERNLLLIKGSVPGA-TGSDVIIRPAVKA 210 >gi|117927515|ref|YP_872066.1| 50S ribosomal protein L3P [Acidothermus cellulolyticus 11B] gi|212288244|sp|A0LRM0|RL3_ACIC1 RecName: Full=50S ribosomal protein L3 gi|117647978|gb|ABK52080.1| LSU ribosomal protein L3P [Acidothermus cellulolyticus 11B] Length = 222 Score = 177 bits (450), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 100/215 (46%), Positives = 129/215 (60%), Gaps = 2/215 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ GR IPVTV+ C V RT D++GY AVQ+G G + V+K Sbjct: 7 GLLGEKLGMTQVFDESGRVIPVTVVRAGPCVVTQVRTPDRDGYSAVQLGYGAVDPRRVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F + V+P++ L E R D VG + FT GQ VDV G++ GKGF+G Sbjct: 67 PLAGHFRAAGVTPRRYLAEVRT-GDAAEYTVGQEVTVEIFTPGQRVDVAGVSKGKGFAGL 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF GL +HG HRS GS G PGRVFK +MAGRMGG RVTV+NL V +V Sbjct: 126 MKRHNFRGLPDSHGTERKHRSPGSIGACATPGRVFKGLRMAGRMGGRRVTVQNLAVQAVK 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 + L+L++G VPG + VR + K N G Sbjct: 186 PEENLLLLQGAVPG-PNGGLVYVRTAAKGKANRDG 219 >gi|209521385|ref|ZP_03270098.1| ribosomal protein L3 [Burkholderia sp. H160] gi|209498205|gb|EDZ98347.1| ribosomal protein L3 [Burkholderia sp. H160] Length = 219 Score = 177 bits (450), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 94/200 (47%), Positives = 126/200 (63%), Gaps = 1/200 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVTFGTRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EF++ L G+V P F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVQAGEILKEFQIDAAKAAELSNGTVVGPELFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG +VTV+NLE+ Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDEKVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAK 199 +D R L+LVKG VPGAK Sbjct: 181 ARIDADRKLLLVKGAVPGAK 200 >gi|90020607|ref|YP_526434.1| 50S ribosomal protein L3 [Saccharophagus degradans 2-40] gi|109893552|sp|Q21M57|RL3_SACD2 RecName: Full=50S ribosomal protein L3 gi|89950207|gb|ABD80222.1| LSU ribosomal protein L3P [Saccharophagus degradans 2-40] Length = 214 Score = 177 bits (450), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 97/215 (45%), Positives = 133/215 (61%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ +G +PVTV+ +D ++ ++++ +GY AVQV G + Sbjct: 1 MTIGIVGRKSGMTRIFTDDGLSVPVTVVEVDPNRITQVKSVETDGYAAVQVTVGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKP G F+ V + + E R + + VG + + F GQ VDVTG + GKGF Sbjct: 61 VSKPEAGHFAKAEVEAGRTVLELR-NESGEQFEVGGLLTVEAFEAGQKVDVTGASKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR+NF ATHG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLEVV Sbjct: 120 AGVIKRYNFRMQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAARVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 VD +R L+L+KG VPGA +++R + KS N Sbjct: 180 RVDVERNLLLIKGAVPGAPGGD-VIIRPAVKSRNN 213 >gi|187476539|ref|YP_784563.1| 50S ribosomal protein L3 [Bordetella avium 197N] gi|109893413|sp|Q2L2G0|RL3_BORA1 RecName: Full=50S ribosomal protein L3 gi|115421125|emb|CAJ47609.1| 50S ribosomal protein L3 [Bordetella avium 197N] Length = 233 Score = 177 bits (450), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 101/213 (47%), Positives = 131/213 (61%), Gaps = 3/213 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+V RK+GMT ++ EG IPVTVL + N +V ++L+ +GY A+QV G + V Sbjct: 16 RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQVKSLESDGYAAIQVTYGNRRASRV 75 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFS-PSYFTVGQLVDVTGMTIGKG 119 +K G F+ L EFR+ GSV + S F GQ VDVTG TIGKG Sbjct: 76 TKAEAGHFAKAGAEAGSILKEFRLDPTRAAEFTAGSVIAVESVFEAGQQVDVTGTTIGKG 135 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRHNFG RA+HG S SHR GS G QDPGR+F K+MAG +G TV+NL+V Sbjct: 136 FAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMAGHLGDVTRTVQNLDV 195 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +RGL+LVKG VPG ++VR + K+ Sbjct: 196 VRVDVERGLLLVKGAVPG-HAGGDVIVRPAVKA 227 >gi|302536251|ref|ZP_07288593.1| 50S ribosomal protein L3 [Streptomyces sp. C] gi|302445146|gb|EFL16962.1| 50S ribosomal protein L3 [Streptomyces sp. C] Length = 214 Score = 177 bits (450), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 98/210 (46%), Positives = 129/210 (61%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ KLGMT V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+K Sbjct: 7 GVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDIDGYESVQIAFGEIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 67 PLKGHFAKADVTPRRHLVELRTS-DASEYTLGQEITAEVFESGVKVDVTGNSKGKGFAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF GL A HGV HRS GS G PGRVFK +MAGRMG RVT +NL + +VD Sbjct: 126 MKRHNFRGLGAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+KG VPG +LVR + K A Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214 >gi|28897031|ref|NP_796636.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus RIMD 2210633] gi|153840341|ref|ZP_01993008.1| ribosomal protein L3 [Vibrio parahaemolyticus AQ3810] gi|260877949|ref|ZP_05890304.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus AN-5034] gi|260897591|ref|ZP_05906087.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus Peru-466] gi|260899521|ref|ZP_05907916.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus AQ4037] gi|42559620|sp|Q87T13|RL3_VIBPA RecName: Full=50S ribosomal protein L3 gi|28805239|dbj|BAC58520.1| ribosomal protein L3 [Vibrio parahaemolyticus RIMD 2210633] gi|149745999|gb|EDM57129.1| ribosomal protein L3 [Vibrio parahaemolyticus AQ3810] gi|308087536|gb|EFO37231.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus Peru-466] gi|308089929|gb|EFO39624.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus AN-5034] gi|308108784|gb|EFO46324.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus AQ4037] gi|328471834|gb|EGF42711.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus 10329] Length = 209 Score = 177 bits (450), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 96/209 (45%), Positives = 134/209 (64%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ EG IPVTV+ ++ +V +TL+ +GY A+QV AG K V+K Sbjct: 3 GLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF GA Sbjct: 63 AEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELTVELFNETKKVDVTGTSKGKGFQGA 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPGA + ++V+ + K+ Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|15642591|ref|NP_232224.1| 50S ribosomal protein L3 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|147673700|ref|YP_001218090.1| 50S ribosomal protein L3 [Vibrio cholerae O395] gi|153827414|ref|ZP_01980081.1| ribosomal protein L3 [Vibrio cholerae MZO-2] gi|153831409|ref|ZP_01984076.1| ribosomal protein L3 [Vibrio cholerae 623-39] gi|227082713|ref|YP_002811264.1| ribosomal protein L3 [Vibrio cholerae M66-2] gi|229507352|ref|ZP_04396857.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae BX 330286] gi|229509725|ref|ZP_04399206.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae B33] gi|229513519|ref|ZP_04402983.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae TMA 21] gi|229516849|ref|ZP_04406295.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae RC9] gi|229521662|ref|ZP_04411080.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae TM 11079-80] gi|229524577|ref|ZP_04413982.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae bv. albensis VL426] gi|229527474|ref|ZP_04416866.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae 12129(1)] gi|229606858|ref|YP_002877506.1| 50S ribosomal protein L3 [Vibrio cholerae MJ-1236] gi|254292178|ref|ZP_04962948.1| ribosomal protein L3 [Vibrio cholerae AM-19226] gi|254851136|ref|ZP_05240486.1| ribosomal protein L3 [Vibrio cholerae MO10] gi|255744435|ref|ZP_05418387.1| LSU ribosomal protein L3p (L3e) [Vibrio cholera CIRS 101] gi|262170153|ref|ZP_06037842.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae RC27] gi|42559699|sp|Q9KNY4|RL3_VIBCH RecName: Full=50S ribosomal protein L3 gi|172047551|sp|A5F549|RL3_VIBC3 RecName: Full=50S ribosomal protein L3 gi|254803701|sp|C3LRQ8|RL3_VIBCM RecName: Full=50S ribosomal protein L3 gi|9657183|gb|AAF95737.1| ribosomal protein L3 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|146315583|gb|ABQ20122.1| ribosomal protein L3 [Vibrio cholerae O395] gi|148873110|gb|EDL71245.1| ribosomal protein L3 [Vibrio cholerae 623-39] gi|149738687|gb|EDM53029.1| ribosomal protein L3 [Vibrio cholerae MZO-2] gi|150421907|gb|EDN13884.1| ribosomal protein L3 [Vibrio cholerae AM-19226] gi|227010601|gb|ACP06813.1| ribosomal protein L3 [Vibrio cholerae M66-2] gi|227014485|gb|ACP10695.1| ribosomal protein L3 [Vibrio cholerae O395] gi|229335106|gb|EEO00591.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae 12129(1)] gi|229338158|gb|EEO03175.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae bv. albensis VL426] gi|229341256|gb|EEO06260.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae TM 11079-80] gi|229345912|gb|EEO10884.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae RC9] gi|229349396|gb|EEO14352.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae TMA 21] gi|229353199|gb|EEO18138.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae B33] gi|229354857|gb|EEO19778.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae BX 330286] gi|229369513|gb|ACQ59936.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae MJ-1236] gi|254846841|gb|EET25255.1| ribosomal protein L3 [Vibrio cholerae MO10] gi|255737960|gb|EET93353.1| LSU ribosomal protein L3p (L3e) [Vibrio cholera CIRS 101] gi|262021561|gb|EEY40273.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae RC27] gi|327485078|gb|AEA79485.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae LMA3894-4] Length = 209 Score = 177 bits (450), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 96/209 (45%), Positives = 134/209 (64%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV G K V+K Sbjct: 3 GLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGSKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF GA Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQGA 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPGA + ++V+ + K+ Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|254383172|ref|ZP_04998526.1| 50S ribosomal protein L3 [Streptomyces sp. Mg1] gi|194342071|gb|EDX23037.1| 50S ribosomal protein L3 [Streptomyces sp. Mg1] Length = 214 Score = 177 bits (450), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 98/210 (46%), Positives = 129/210 (61%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ KLGMT V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+K Sbjct: 7 GVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDIDGYESVQIAFGEIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 67 PLKGHFAKADVTPRRHLVELRTS-DASEYTLGQEITAQVFESGVKVDVTGNSKGKGFAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF GL A HGV HRS GS G PGRVFK +MAGRMG RVT +NL + +VD Sbjct: 126 MKRHNFRGLGAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+KG VPG +LVR + K A Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214 >gi|156044218|ref|XP_001588665.1| hypothetical protein SS1G_10212 [Sclerotinia sclerotiorum 1980] gi|154694601|gb|EDN94339.1| hypothetical protein SS1G_10212 [Sclerotinia sclerotiorum 1980 UF-70] Length = 311 Score = 177 bits (449), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 91/199 (45%), Positives = 128/199 (64%), Gaps = 2/199 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G + K GMT +Y+ E G R P TV+ LD QVV H+T +KNGY AVQVGAG Sbjct: 74 LRTGALGIKKGMTALYDPETGVRTPCTVVQLDRVQVVAHKTREKNGYYAVQVGAGWKHPS 133 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NVS+P G F + V+PK+ + EFRV+ + LL VG +F GQ VD + G G Sbjct: 134 NVSRPELGHFEASEVAPKRHMAEFRVKNEGGLLEVGRSIGAEWFIEGQFVDARANSRGMG 193 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+G MK+ + G A+HG S +HR+ GS G Q G RV K+MAGRMG ++VT++N++ Sbjct: 194 FAGGMKKWGWSGQPASHGNSKNHRTMGSAGASQGSGSRVHPGKRMAGRMGNHQVTIQNVK 253 Query: 179 VVSVDDKRGLILVKGCVPG 197 V+ VD ++GL+++ GC+ G Sbjct: 254 VLKVDAEKGLVILNGCIAG 272 >gi|71278595|ref|YP_267622.1| 50S ribosomal protein L3 [Colwellia psychrerythraea 34H] gi|109893422|sp|Q487Z3|RL3_COLP3 RecName: Full=50S ribosomal protein L3 gi|71144335|gb|AAZ24808.1| ribosomal protein L3 [Colwellia psychrerythraea 34H] Length = 212 Score = 177 bits (449), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 137/213 (64%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V+ +G PVTV+ ++ +V +T+D +GY A+QV G+ K Sbjct: 1 MTIGLVGRKVGMTRVFTEDGVSTPVTVIEVEANRVAQVKTVDNDGYSALQVTTGKRKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP G F+ + + L+EFR+ +++ + GS + F +LVDVTG + GKG Sbjct: 61 VTKPAAGHFAKAGIEAGRGLWEFRLNENEGSDIEAGSEITVEVFNDTKLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHGVS+SHRS+GS G Q PGRVFK KKM+G MG R T +NLE+ Sbjct: 121 FQGGIKRWNFTMQHATHGVSLSHRSNGSLGQCQTPGRVFKGKKMSGHMGAVRCTTQNLEL 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+L+KG VPGA N ++++ + K+ Sbjct: 181 VRVDAERNLLLIKGAVPGA-INGNVIIKPAVKA 212 >gi|145300935|ref|YP_001143776.1| 50S ribosomal protein L3 [Aeromonas salmonicida subsp. salmonicida A449] gi|166233113|sp|A4ST06|RL3_AERS4 RecName: Full=50S ribosomal protein L3 gi|142853707|gb|ABO92028.1| ribosomal protein L3 [Aeromonas salmonicida subsp. salmonicida A449] Length = 210 Score = 177 bits (449), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 95/212 (44%), Positives = 134/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ ++ +V ++++ +GY A+QV G K Sbjct: 1 MTIGLVGRKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKSVETDGYNAIQVTTGAKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP G F+ V + L+EFR+ + + VGS ++VDVTG + GKGF Sbjct: 61 VTKPEAGHFAKAGVEAGRGLWEFRLN-NGETFTVGSELKVDLLADVKMVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V Sbjct: 120 AGTVKRHNFRTQDMTHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHMGAERVTTQNLELV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA N ++V+ + K+ Sbjct: 180 RVDAERNLLLIKGAVPGA-TNGNVIVKPAVKA 210 >gi|84394648|ref|ZP_00993340.1| 50S ribosomal protein L3 [Vibrio splendidus 12B01] gi|86148881|ref|ZP_01067133.1| 50S ribosomal protein L3 [Vibrio sp. MED222] gi|218710749|ref|YP_002418370.1| 50S ribosomal protein L3 [Vibrio splendidus LGP32] gi|254803702|sp|B7VLF7|RL3_VIBSL RecName: Full=50S ribosomal protein L3 gi|84374730|gb|EAP91685.1| 50S ribosomal protein L3 [Vibrio splendidus 12B01] gi|85833333|gb|EAQ51539.1| 50S ribosomal protein L3 [Vibrio sp. MED222] gi|218323768|emb|CAV20125.1| 50S ribosomal protein L3 [Vibrio splendidus LGP32] Length = 209 Score = 177 bits (449), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 95/209 (45%), Positives = 134/209 (64%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT V+ EG IPVTV+ ++ ++ +TL+ +GY A+QV G K V+K Sbjct: 3 GLVGRKVGMTRVFTEEGVSIPVTVVEVEANRISQVKTLETDGYAAIQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF GA Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELNVELFNEIKKVDVTGTSKGKGFQGA 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 IKRWNFSTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPG+ + ++V+ + K+ Sbjct: 182 AERNLLLIKGAVPGSTGGN-VIVKPAVKA 209 >gi|307731255|ref|YP_003908479.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1003] gi|323527602|ref|YP_004229755.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1001] gi|307585790|gb|ADN59188.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1003] gi|323384604|gb|ADX56695.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1001] Length = 219 Score = 177 bits (449), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 94/200 (47%), Positives = 125/200 (62%), Gaps = 1/200 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGTRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EF++ L G+V P F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVQAGEILKEFQIDAAKAAELSNGAVVGPDLFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 121 YAGTIKRYNFASGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAK 199 +D R L+LVKG VPGAK Sbjct: 181 ARIDADRKLLLVKGAVPGAK 200 >gi|323357372|ref|YP_004223768.1| ribosomal protein L3 [Microbacterium testaceum StLB037] gi|323273743|dbj|BAJ73888.1| ribosomal protein L3 [Microbacterium testaceum StLB037] Length = 219 Score = 177 bits (449), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 95/210 (45%), Positives = 130/210 (61%), Gaps = 1/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ G+ +PVTV+ + V R+L+K+GY AVQ+G G+ + V+K Sbjct: 11 GLLGTKLGMTQVWDENGKLVPVTVIEVAPNVVTQLRSLEKDGYNAVQIGYGQIDPRKVNK 70 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ F + V+P++ L E R D + F GQLVDV G + GKG +G Sbjct: 71 PLTAHFDAAGVTPRRHLTEVRTADAADYTLGQELTVDGLFEAGQLVDVVGTSKGKGTAGV 130 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF G+ A+HG +HR GS G P RVFK +MAGRMGG RVTV NL V +VD Sbjct: 131 MKRHNFKGVSASHGAHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGERVTVLNLTVHAVD 190 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+LVKG VPGA + + VR++ K A Sbjct: 191 AEKGLMLVKGAVPGA-RGRIVYVRNAVKGA 219 >gi|262370578|ref|ZP_06063903.1| 50S ribosomal protein L3 [Acinetobacter johnsonii SH046] gi|262314378|gb|EEY95420.1| 50S ribosomal protein L3 [Acinetobacter johnsonii SH046] Length = 214 Score = 177 bits (449), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 95/213 (44%), Positives = 133/213 (62%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY A+Q+ GE + Sbjct: 3 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAIQITTGERRESR 62 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFR + D + VG FTVGQ+VDVTG + GKG Sbjct: 63 VTNAQKGHFAKAGVAAGRLVQEFRATEADLEGREVGGTIGVDMFTVGQVVDVTGQSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+ Sbjct: 123 FQGGVKRWNFRTQDATHGNSLSHRVLGSTGQNQTPGRVFKGKKMAGHLGAERVTVQGLEI 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VS+D +R +++VKG +PGA + VR + K+ Sbjct: 183 VSIDAERSVLVVKGAIPGATGGD-VTVRPTIKA 214 >gi|297181138|gb|ADI17335.1| hypothetical protein [uncultured Oceanospirillales bacterium HF0070_21F08] Length = 211 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 98/212 (46%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GV+ RK GMT V+ EG +PVTV+ + +V +T + +GY AVQV GE + Sbjct: 1 MAIGVIGRKCGMTRVFTEEGISVPVTVIEVTPNRVSQVKTEETDGYEAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP G F+ V + EFR + + L GS + F GQ VDVTG + GKGF Sbjct: 61 VTKPQAGHFAKAGVEAGRSAGEFRSEVGE--LQAGSEITLEVFEAGQSVDVTGTSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF ATHG S+SHR+ GS G Q PGRVFK KKM+G +G RVTV+NLE+V Sbjct: 119 AGTVKRWNFRTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMSGHLGAERVTVQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++ L+LVKG +PGA ++VR + K+ Sbjct: 179 RVDAEKNLLLVKGAIPGAAGGD-VIVRPAVKA 209 >gi|331214855|ref|XP_003320108.1| 50S ribosomal protein L3 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309299098|gb|EFP75689.1| 50S ribosomal protein L3 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 367 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 95/211 (45%), Positives = 134/211 (63%), Gaps = 2/211 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN- 60 R+GV+ARK GMT ++ +G RIPVTVL L++ QVV H+ +++ Y A+Q+G + +N Sbjct: 96 RTGVLARKRGMTSFWDSDGIRIPVTVLELEDVQVVGHKYKERDNYDAIQIGCTDKFSRNS 155 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + ++ ++++PK+K+ EF V P+G+ S ++F GQ VDV + GKGF Sbjct: 156 IHNAQLKYYKHLDLTPKQKVTEFVVSNHQCFSPIGTSISAAHFVPGQFVDVKSNSKGKGF 215 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR F G A+HG + HR GSTG QDPGRV+ KKMAGRMG VTV+NL V Sbjct: 216 AGVMKRWGFSGGNASHGSTKHHRKAGSTGQHQDPGRVWPGKKMAGRMGNQPVTVRNLLVA 275 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D LI VKG VPG KK +++ V D+ K Sbjct: 276 RIDTDMNLIYVKGQVPGPKK-AFVRVTDAEK 305 >gi|299768666|ref|YP_003730692.1| 50S ribosomal protein L3 [Acinetobacter sp. DR1] gi|298698754|gb|ADI89319.1| 50S ribosomal protein L3 [Acinetobacter sp. DR1] Length = 212 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY AVQV GE + Sbjct: 1 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFRV + + + VG FTVGQ+VDVTG + GKG Sbjct: 61 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQVVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+ Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VS+D +R +++VKG +PG+ ++VR + K+ Sbjct: 181 VSIDAERSVLVVKGAIPGSTGGD-VIVRPTIKA 212 >gi|295838404|ref|ZP_06825337.1| 50S ribosomal protein L3 [Streptomyces sp. SPB74] gi|302519661|ref|ZP_07272003.1| 50S ribosomal protein L3 [Streptomyces sp. SPB78] gi|318058128|ref|ZP_07976851.1| 50S ribosomal protein L3 [Streptomyces sp. SA3_actG] gi|318076019|ref|ZP_07983351.1| 50S ribosomal protein L3 [Streptomyces sp. SA3_actF] gi|197695799|gb|EDY42732.1| 50S ribosomal protein L3 [Streptomyces sp. SPB74] gi|302428556|gb|EFL00372.1| 50S ribosomal protein L3 [Streptomyces sp. SPB78] Length = 214 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 97/210 (46%), Positives = 128/210 (60%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+K Sbjct: 7 GILGEKLGMTQVWDDNNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 67 PLKGHFAKADVTPRRHLVEIRTS-DSSEYTLGQEVTAETFESGVKVDVTGKSKGKGFAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +VD Sbjct: 126 MKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+KG VPG +LVR + K A Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214 >gi|148982483|ref|ZP_01816779.1| 50S ribosomal protein L3 [Vibrionales bacterium SWAT-3] gi|145960448|gb|EDK25827.1| 50S ribosomal protein L3 [Vibrionales bacterium SWAT-3] Length = 209 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 95/209 (45%), Positives = 134/209 (64%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT V+ EG IPVTV+ ++ ++ +TL+ +GY A+QV G K V+K Sbjct: 3 GLVGRKVGMTRVFTEEGVSIPVTVVEVEANRISQVKTLENDGYAAIQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF GA Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELNVELFNEIKKVDVTGTSKGKGFQGA 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 VKRWNFSTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPG+ + ++V+ + K+ Sbjct: 182 AERNLLLIKGAVPGSTGGN-VIVKPAVKA 209 >gi|33152958|ref|NP_874311.1| 50S ribosomal protein L3 [Haemophilus ducreyi 35000HP] gi|42559602|sp|Q7VKD2|RL3_HAEDU RecName: Full=50S ribosomal protein L3 gi|33149183|gb|AAP96700.1| 50S ribosomal protein L3 [Haemophilus ducreyi 35000HP] Length = 208 Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 98/209 (46%), Positives = 134/209 (64%), Gaps = 3/209 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+N +G IPVTV+ ++ +V +TL+ +GY A+QV G K V+K Sbjct: 3 GLIGRKVGMTRVFNEDGVSIPVTVIEIEANRVTQVKTLENDGYSAIQVTTGTKKASRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V + L+EFR + ++ +G + F + VDVTG + GKGF+G Sbjct: 63 PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFAGG 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV VD Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 180 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+LVKG VPGA NS ++V+ + K+ Sbjct: 181 AERKLLLVKGAVPGA-TNSNVIVKPAVKA 208 >gi|325123604|gb|ADY83127.1| 50S ribosomal protein L3 [Acinetobacter calcoaceticus PHEA-2] Length = 212 Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 134/213 (62%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY AVQV GE + Sbjct: 1 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFRV + + + VG F VGQ+VDVTG + GKG Sbjct: 61 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFAVGQIVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+ Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VS+D +R +++VKG +PGA ++VR + K+ Sbjct: 181 VSIDAERSVLVVKGAIPGATGGD-VIVRPTIKA 212 >gi|322515635|ref|ZP_08068613.1| 50S ribosomal protein L3 [Actinobacillus ureae ATCC 25976] gi|322118286|gb|EFX90569.1| 50S ribosomal protein L3 [Actinobacillus ureae ATCC 25976] Length = 208 Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 99/209 (47%), Positives = 134/209 (64%), Gaps = 3/209 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV G K V+K Sbjct: 3 GLVGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDGYSAIQVTTGTKKASRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V + L+EFR + ++ +G + FT + VDVTG + GKGF+G Sbjct: 63 PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINIDIFTDVKKVDVTGTSKGKGFAGG 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV VD Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 180 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+LVKG VPGA NS ++V+ + K+ Sbjct: 181 AERKLLLVKGAVPGA-TNSDVIVKPAVKA 208 >gi|330827883|ref|YP_004390835.1| 50S ribosomal protein L3 [Aeromonas veronii B565] gi|328803019|gb|AEB48218.1| 50S ribosomal protein L3 [Aeromonas veronii B565] Length = 210 Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 96/212 (45%), Positives = 133/212 (62%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ ++ +V ++++ +GY A+QV G K Sbjct: 1 MTIGLVGRKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKSVETDGYNAIQVTTGAKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP G F+ V + L+EFR+ + + VGS +LVDVTG + GKGF Sbjct: 61 VTKPEAGHFAKAGVEAGRGLWEFRLN-NGETFTVGSELKVDLLADVKLVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNF THG S+SHR GS G Q PGRVFK KKMAG MG RVT +NLE+V Sbjct: 120 AGTVKRHNFRTQDMTHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGHMGAERVTTQNLELV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA N ++V+ + K+ Sbjct: 180 RVDAERNLLLIKGAVPGA-TNGNVIVKPAVKA 210 >gi|325954992|ref|YP_004238652.1| 50S ribosomal protein L3 [Weeksella virosa DSM 16922] gi|323437610|gb|ADX68074.1| 50S ribosomal protein L3 [Weeksella virosa DSM 16922] Length = 209 Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 94/206 (45%), Positives = 131/206 (63%), Gaps = 2/206 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+ MT +++ G+ IP T++ C V RT +K+GY +VQ+G +AK KN S Sbjct: 2 SGIIGKKVAMTSLFDENGKNIPCTIIQAGPCVVTQVRTEEKDGYKSVQLGFDDAKEKNTS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 ++G F +PK+KL EF K D L +G G+ V VTG + GKGF G Sbjct: 62 AALKGHFKKAGTTPKRKLVEFYGDKWVDTLNLGDEVKVDLIQEGEYVSVTGTSKGKGFQG 121 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG+ +ATHG R+ GS G DP RVFK +MAGRMGG +VTV+NLEV+ Sbjct: 122 VVKRHGFGGVGQATHGQHNRLRAPGSIGAGSDPSRVFKGMRMAGRMGGKQVTVQNLEVLK 181 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 VD ++ L++VKG VPG KNS+++VR Sbjct: 182 VDTEQNLLIVKGAVPGP-KNSYVIVR 206 >gi|307543825|ref|YP_003896304.1| 50S ribosomal protein L3 [Halomonas elongata DSM 2581] gi|307215849|emb|CBV41119.1| 50S ribosomal protein L3 [Halomonas elongata DSM 2581] Length = 212 Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 96/212 (45%), Positives = 134/212 (63%), Gaps = 1/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V +K GMT V+ +G +PVTV+ ++ +V ++++ +GY AVQV G K K+ Sbjct: 1 MTIGLVGKKAGMTRVFTEDGASVPVTVIEVEPNRVTRVKSVESDGYAAVQVTTGSRKAKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SK G F+ V + L EFR+ + + VG + S F GQ VDVTG + GKG+ Sbjct: 61 LSKAQAGEFAKAGVEAGRSLMEFRLDEGAEAPEVGGELTVSLFEAGQRVDVTGTSKGKGY 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR NF +HG S++HR+ GS G Q PGRVFK KKMAG+MG R TV+ LEVV Sbjct: 121 QGAVKRWNFRTQDNSHGNSLAHRAPGSIGMCQTPGRVFKGKKMAGQMGNARCTVQTLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA S ++VR + K+ Sbjct: 181 RVDAERNLLLIKGAVPGA-TGSDVIVRSAVKA 211 >gi|254391393|ref|ZP_05006596.1| 50S ribosomal protein L3 [Streptomyces clavuligerus ATCC 27064] gi|294814467|ref|ZP_06773110.1| 50S ribosomal protein L3 [Streptomyces clavuligerus ATCC 27064] gi|326442856|ref|ZP_08217590.1| 50S ribosomal protein L3 [Streptomyces clavuligerus ATCC 27064] gi|197705083|gb|EDY50895.1| 50S ribosomal protein L3 [Streptomyces clavuligerus ATCC 27064] gi|294327066|gb|EFG08709.1| 50S ribosomal protein L3 [Streptomyces clavuligerus ATCC 27064] Length = 214 Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 98/210 (46%), Positives = 129/210 (61%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ KLGMT V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+K Sbjct: 7 GVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDVDGYESVQIAFGEIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ +V+P++ L E R D +G + + F G VDVTG + GKGF+G Sbjct: 67 PLKGHFAKADVTPRRHLVELRTS-DASEYTLGQEITAAVFESGVKVDVTGKSKGKGFAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +VD Sbjct: 126 MKRHNFRGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+KG VPG +LVR + K A Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214 >gi|262280225|ref|ZP_06058009.1| 50S ribosomal protein L3 [Acinetobacter calcoaceticus RUH2202] gi|262258003|gb|EEY76737.1| 50S ribosomal protein L3 [Acinetobacter calcoaceticus RUH2202] Length = 214 Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY AVQV GE + Sbjct: 3 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 62 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFRV + + + VG FTVGQ+VDVTG + GKG Sbjct: 63 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQVVDVTGQSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+ Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VS+D +R +++VKG +PG+ ++VR + K+ Sbjct: 183 VSIDAERSVLVVKGAIPGSTGGD-VIVRPTIKA 214 >gi|309812372|ref|ZP_07706127.1| 50S ribosomal protein L3 [Dermacoccus sp. Ellin185] gi|308433677|gb|EFP57554.1| 50S ribosomal protein L3 [Dermacoccus sp. Ellin185] Length = 210 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 94/210 (44%), Positives = 129/210 (61%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ + R IPVTV+ + C V R+ +GY AVQ+G G+ + V+K Sbjct: 3 GLLGEKLGMTQVWDADNRLIPVTVVAVGPCVVTQLRSEGVDGYNAVQIGYGQIDPRKVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+P++ L E R D +G + F GQ VDV G T GKGF+G Sbjct: 63 PLTGHFEKAGVTPRRHLAELRTS-DAGEYSLGQELTAEAFEAGQKVDVVGRTKGKGFAGV 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G+ A+HG +HR GS G PGRVFK +MAGRMGG R T +NL++ +VD Sbjct: 122 MKRHGFAGVSASHGAHRNHRKPGSIGGCATPGRVFKGMRMAGRMGGVRQTTQNLQIHAVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+KG VPG + +LVR + K A Sbjct: 182 AEKGLLLIKGAVPG-PAGAVVLVRTAIKGA 210 >gi|291544460|emb|CBL17569.1| LSU ribosomal protein L3P [Ruminococcus sp. 18P13] Length = 211 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 93/213 (43%), Positives = 134/213 (62%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M+ G++ +K+GMT +++ E G+ IPVTV+ C VV +T++ +GY A+Q+G + K + Sbjct: 1 MQKGIIGKKIGMTQIFDQEAGKVIPVTVVEAGPCVVVQKKTVENDGYAALQIGFDDVKAQ 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KPM+G F V K+ L EFR+ D D L VG + F VG +VDV+G + GKG Sbjct: 61 RINKPMKGHFDKSEVGYKRVLKEFRLD-DCDALNVGDLLKADTFAVGDIVDVSGTSKGKG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+GA+KRHN L+ THG HR GS G P R++K K MAG MG +VTV+NLEV Sbjct: 120 FTGAIKRHNQHRLKETHGTGPVHRQAGSMGACSSPSRIYKGKGMAGHMGAEKVTVQNLEV 179 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V +D + LI +KG +PG K + + DS K+ Sbjct: 180 VKIDVENNLIALKGAIPGP-KGGVVCITDSVKA 211 >gi|34499641|ref|NP_903856.1| 50S ribosomal protein L3 [Chromobacterium violaceum ATCC 12472] gi|42559595|sp|Q7NQF2|RL3_CHRVO RecName: Full=50S ribosomal protein L3 gi|34105491|gb|AAQ61846.1| 50S ribosomal protein L3 [Chromobacterium violaceum ATCC 12472] Length = 214 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 104/214 (48%), Positives = 133/214 (62%), Gaps = 4/214 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTVL + + +V +T + +GY AVQV G K Sbjct: 1 MSLGLVGRKVGMTRIFAEDGATIPVTVLDMSSNRVTQIKTAETDGYNAVQVTYGSKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD--DDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 V+K G F+ V L EF + D + P G + FTVGQLVDVTG + GK Sbjct: 61 VNKADAGHFAKAGVEAGLGLAEFALSADALSNFKP-GDAIAVEIFTVGQLVDVTGTSKGK 119 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GFSG +KRHNF RA+HG S SH + GS G QDPGRVF K+MAG+ G + TV+ LE Sbjct: 120 GFSGVIKRHNFSSNRASHGNSRSHNTPGSIGQAQDPGRVFPGKRMAGQYGNVKSTVQCLE 179 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +V VD +R LILVKG VPGA KN ++VR S K+ Sbjct: 180 IVRVDAERQLILVKGAVPGA-KNGDVVVRPSVKA 212 >gi|20808660|ref|NP_623831.1| 50S ribosomal protein L3 [Thermoanaerobacter tengcongensis MB4] gi|42559656|sp|Q8R7V4|RL3_THETN RecName: Full=50S ribosomal protein L3 gi|20517294|gb|AAM25435.1| Ribosomal protein L3 [Thermoanaerobacter tengcongensis MB4] Length = 210 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 100/214 (46%), Positives = 137/214 (64%), Gaps = 7/214 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +K GMT +++ +G IPVTV+ C VV +T++K+GY A+QVG G+ K Sbjct: 1 MKKGILGKKHGMTQIFDEKGEVIPVTVIEAGPCVVVQKKTVEKDGYNAIQVGFGDVSEKK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118 ++KP+ G F VSPK+ L EFR+ DD+ VG+ F G VDVTG++ GK Sbjct: 61 LNKPLLGHFKKAGVSPKRYLREFRL---DDISGYEVGTEIKVDIFKPGDRVDVTGISKGK 117 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF+G +KR+ +HG S HR GS G DPGR FK KKM GRMG +RVT++NLE Sbjct: 118 GFAGVIKRYGARRGPMSHG-SKYHRRVGSMGATTDPGRTFKGKKMPGRMGSDRVTIQNLE 176 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VV VD + L++VKG VPG K S +++RDS KS Sbjct: 177 VVKVDPELNLLVVKGSVPGP-KGSLLIIRDSVKS 209 >gi|256825886|ref|YP_003149846.1| 50S ribosomal protein L3P [Kytococcus sedentarius DSM 20547] gi|256689279|gb|ACV07081.1| LSU ribosomal protein L3P [Kytococcus sedentarius DSM 20547] Length = 219 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 94/211 (44%), Positives = 128/211 (60%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 +GV+ KLGMT V++ + R +PVTV+ + V RT D +GY AVQ+ G+ + VS Sbjct: 11 AGVLGTKLGMTQVWDEDNRLVPVTVVQVAPNVVTQIRTQDTDGYGAVQIATGDIDPRKVS 70 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P+RG F V+P++ + E R D +G + F G VDVTG T GKGF+G Sbjct: 71 NPLRGHFEKAGVTPRRHVTELRT-ADSGSYELGQELTVETFENGATVDVTGTTKGKGFAG 129 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G PGRVF+ +MAGRMGG R T +NL + +V Sbjct: 130 VMKRHGFAGVSASHGAHRNHRKPGSIGGCATPGRVFRGTRMAGRMGGERQTTQNLTIHAV 189 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D +GL+L+KG VPGA + +LVR + K A Sbjct: 190 DADKGLLLIKGAVPGA-RGGLVLVRSAAKGA 219 >gi|328768339|gb|EGF78386.1| hypothetical protein BATDEDRAFT_13292 [Batrachochytrium dendrobatidis JAM81] Length = 279 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 102/211 (48%), Positives = 133/211 (63%), Gaps = 3/211 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA-GEAKVKN 60 R+G+VA K GMT +++ G+ +PVTVL + NCQV+ R +G V+VGA + + Sbjct: 19 RTGLVALKKGMTSIFDEWGQMVPVTVLEVSNCQVIRTRFHAGSGKHMVEVGAVSQRRSYR 78 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + + F VSPKKK+ EF V D +P G S+F GQ VDV G T+GKGF Sbjct: 79 LHRAQLFHFRKYQVSPKKKITEFDVT-PDACIPSGVRLFASHFVAGQYVDVQGKTMGKGF 137 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G MKR FGG A+HGVSISHRS GS G QDPG+V+K KKM GRMGG T +NL+V+ Sbjct: 138 QGVMKRWGFGGQPASHGVSISHRSLGSIGQCQDPGKVWKGKKMPGRMGGVNRTTQNLKVI 197 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D++ LI VKG VPG +N ++ V DS K Sbjct: 198 KIDNQYNLIYVKGGVPGP-ENGYLRVTDSIK 227 >gi|89076770|ref|ZP_01163043.1| 50S ribosomal protein L3 [Photobacterium sp. SKA34] gi|90581758|ref|ZP_01237542.1| 50S ribosomal protein L3 [Vibrio angustum S14] gi|89047583|gb|EAR53197.1| 50S ribosomal protein L3 [Photobacterium sp. SKA34] gi|90437056|gb|EAS62263.1| 50S ribosomal protein L3 [Vibrio angustum S14] Length = 209 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 92/195 (47%), Positives = 128/195 (65%), Gaps = 1/195 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT ++ +G IPVTV+ ++N +V ++++ +GY A+QV AG K VSK Sbjct: 3 GLIGRKVGMTRIFTEDGISIPVTVVEVENNRVTQVKSVETDGYNAIQVTAGTKKASRVSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF GA Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLENSEEF-AVGAELNVELFNDIKKVDVTGTSKGKGFQGA 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKRGLILVKGCVPGA 198 +R L+L+KG VPG+ Sbjct: 182 AERNLLLIKGAVPGS 196 >gi|332139848|ref|YP_004425586.1| 50S ribosomal protein L3 [Alteromonas macleodii str. 'Deep ecotype'] gi|332139861|ref|YP_004425599.1| 50S ribosomal protein L3 [Alteromonas macleodii str. 'Deep ecotype'] gi|226725125|sp|B4RZN2|RL3_ALTMD RecName: Full=50S ribosomal protein L3 gi|327549870|gb|AEA96588.1| 50S ribosomal protein L3 [Alteromonas macleodii str. 'Deep ecotype'] gi|327549883|gb|AEA96601.1| 50S ribosomal protein L3 [Alteromonas macleodii str. 'Deep ecotype'] Length = 212 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ +V RT + +GY A+QV AG K Sbjct: 1 MAIGLVGRKVGMTRIFTEDGTSIPVTVIEATPNRVTQLRTEESDGYRALQVTAGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++K G F+ V + L EFR+++++ + VGS + F + +DVTG + GKG Sbjct: 61 INKAEAGHFAKAGVEAGRTLVEFRLEENEGADIEVGSEITVEIFNDTKKIDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F GA+KR NF R THG S+SHR+ GS G Q PG+VFK KKMAG++G +VT ++LEV Sbjct: 121 FQGAIKRWNFSSQRMTHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQLGNKQVTTQSLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD + GLILVKG VPGA N ++V+ + K+ Sbjct: 181 VRVDVENGLILVKGAVPGATGND-VIVKPAVKA 212 >gi|226953871|ref|ZP_03824335.1| 50S ribosomal protein L3 [Acinetobacter sp. ATCC 27244] gi|294651634|ref|ZP_06728938.1| 50S ribosomal protein L3 [Acinetobacter haemolyticus ATCC 19194] gi|226835354|gb|EEH67737.1| 50S ribosomal protein L3 [Acinetobacter sp. ATCC 27244] gi|292822483|gb|EFF81382.1| 50S ribosomal protein L3 [Acinetobacter haemolyticus ATCC 19194] Length = 214 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT V+ G +PVTV+ +D ++ +TL+ +GY A+QV GE + Sbjct: 3 MAIGLVGRKCGMTRVFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAIQVTTGERRESR 62 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFRV + + + VG FTVGQ+VDVTG + GKG Sbjct: 63 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGSIGVDLFTVGQIVDVTGQSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+ Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VS+D +R +++VKG +PG+ ++VR + K+ Sbjct: 183 VSIDAERSVLVVKGAIPGSTGGD-VIVRPTIKA 214 >gi|297192703|ref|ZP_06910101.1| 50S ribosomal protein L3 [Streptomyces pristinaespiralis ATCC 25486] gi|197721642|gb|EDY65550.1| 50S ribosomal protein L3 [Streptomyces pristinaespiralis ATCC 25486] Length = 214 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 98/210 (46%), Positives = 128/210 (60%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ KLGMT V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+K Sbjct: 7 GVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDIDGYESVQIAFGEIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 67 PLKGHFAKADVTPRRHLVELRT-PDASEYTLGQEITAEVFESGVKVDVTGKSKGKGFAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +VD Sbjct: 126 MKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+KG VPG +LVR + K A Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214 >gi|27364215|ref|NP_759743.1| 50S ribosomal protein L3 [Vibrio vulnificus CMCP6] gi|320157601|ref|YP_004189980.1| 50S ribosomal protein L3p (L3e) [Vibrio vulnificus MO6-24/O] gi|42559633|sp|Q8DE39|RL3_VIBVU RecName: Full=50S ribosomal protein L3 gi|27360333|gb|AAO09270.1| LSU ribosomal protein L3p (L3e) [Vibrio vulnificus CMCP6] gi|319932913|gb|ADV87777.1| LSU ribosomal protein L3p (L3e) [Vibrio vulnificus MO6-24/O] Length = 209 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 96/209 (45%), Positives = 133/209 (63%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ EG IPVTV+ ++ +V +TL+ +GY A+QV AG K V+K Sbjct: 3 GLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVAQVKTLETDGYAAIQVTAGTKKANRVNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF G Sbjct: 63 AEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPGA + ++V+ + K+ Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|78064924|ref|YP_367693.1| 50S ribosomal protein L3 [Burkholderia sp. 383] gi|109893416|sp|Q39KG7|RL3_BURS3 RecName: Full=50S ribosomal protein L3 gi|77965669|gb|ABB07049.1| LSU ribosomal protein L3P [Burkholderia sp. 383] Length = 217 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 94/200 (47%), Positives = 125/200 (62%), Gaps = 1/200 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 2 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR+ L G+V F VGQ VDV G++IGKG Sbjct: 62 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGVDLFEVGQKVDVQGVSIGKG 121 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RATHG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 122 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 181 Query: 180 VSVDDKRGLILVKGCVPGAK 199 +D +R L+LVKG +PGAK Sbjct: 182 ARIDAERKLLLVKGAIPGAK 201 >gi|32035713|ref|ZP_00135594.1| COG0087: Ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209224|ref|YP_001054449.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae L20] gi|165977196|ref|YP_001652789.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190151114|ref|YP_001969639.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303250012|ref|ZP_07336214.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253186|ref|ZP_07339335.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307246689|ref|ZP_07528759.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307248831|ref|ZP_07530844.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307251058|ref|ZP_07532982.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307253444|ref|ZP_07535315.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307255674|ref|ZP_07537478.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307257857|ref|ZP_07539614.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307260126|ref|ZP_07541836.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307262255|ref|ZP_07543904.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307264464|ref|ZP_07546049.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|166233111|sp|A3N358|RL3_ACTP2 RecName: Full=50S ribosomal protein L3 gi|226725121|sp|B3GZ11|RL3_ACTP7 RecName: Full=50S ribosomal protein L3 gi|226725122|sp|B0BST1|RL3_ACTPJ RecName: Full=50S ribosomal protein L3 gi|126098016|gb|ABN74844.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165877297|gb|ABY70345.1| ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189916245|gb|ACE62497.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302647868|gb|EFL78075.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302651075|gb|EFL81229.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306852389|gb|EFM84624.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306854758|gb|EFM86948.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306856888|gb|EFM89020.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306859123|gb|EFM91165.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306861351|gb|EFM93341.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306863763|gb|EFM95689.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306865772|gb|EFM97650.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306868018|gb|EFM99845.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306870161|gb|EFN01920.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 208 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 99/209 (47%), Positives = 133/209 (63%), Gaps = 3/209 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV G K V+K Sbjct: 3 GLVGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDGYSAIQVTTGSKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V + L+EFR + ++ +G + FT + VDVTG + GKGF G Sbjct: 63 PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFTDVKKVDVTGTSKGKGFQGG 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV VD Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 180 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+LVKG VPGA NS ++V+ + K+ Sbjct: 181 AERKLLLVKGAVPGA-TNSDVIVKPAVKA 208 >gi|260770913|ref|ZP_05879842.1| LSU ribosomal protein L3p (L3e) [Vibrio furnissii CIP 102972] gi|260614150|gb|EEX39340.1| LSU ribosomal protein L3p (L3e) [Vibrio furnissii CIP 102972] gi|315178959|gb|ADT85873.1| 50S ribosomal protein L3 [Vibrio furnissii NCTC 11218] Length = 209 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 96/209 (45%), Positives = 134/209 (64%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV AG K V+K Sbjct: 3 GLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF GA Sbjct: 63 AEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGSELTVELFNETKKVDVTGTSKGKGFQGA 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPGA + ++V+ + K+ Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|239995000|ref|ZP_04715524.1| 50S ribosomal subunit protein L3 [Alteromonas macleodii ATCC 27126] Length = 212 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ +V RT + +GY A+QV AG K Sbjct: 1 MAIGLVGRKVGMTRIFTEDGTSIPVTVIEATPNRVTQLRTEETDGYRALQVTAGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++K G F+ V + L EFR+++++ + VGS + F + +DVTG + GKG Sbjct: 61 INKAEAGHFAKAGVEAGRTLVEFRLEENEGADIEVGSEITVEIFNDTKKIDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F GA+KR NF R THG S+SHR+ GS G Q PG+VFK KKMAG++G +VT ++LEV Sbjct: 121 FQGAIKRWNFSSQRMTHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQLGNKQVTTQSLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD + GLILVKG VPGA N ++V+ + K+ Sbjct: 181 VRVDVENGLILVKGAVPGATGND-VIVKPAVKA 212 >gi|113460208|ref|YP_718265.1| 50S ribosomal protein L3 [Haemophilus somnus 129PT] gi|170718246|ref|YP_001785266.1| 50S ribosomal protein L3 [Haemophilus somnus 2336] gi|122945127|sp|Q0I163|RL3_HAES1 RecName: Full=50S ribosomal protein L3 gi|189042848|sp|B0UX13|RL3_HAES2 RecName: Full=50S ribosomal protein L3 gi|112822251|gb|ABI24340.1| LSU ribosomal protein L3P [Haemophilus somnus 129PT] gi|168826375|gb|ACA31746.1| ribosomal protein L3 [Haemophilus somnus 2336] Length = 208 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 99/209 (47%), Positives = 134/209 (64%), Gaps = 3/209 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT ++N +G IPVTV+ ++ +V +TL+ +GY AVQV G K V+K Sbjct: 3 GLVGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTLENDGYTAVQVTTGFKKASRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V + L+EFR + ++ +G + FT + VDVTG + GKGF G Sbjct: 63 PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFTDVKKVDVTGTSKGKGFQGG 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LE+V VD Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEIVRVD 180 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+LVKG VPGA NS ++V+ + K+ Sbjct: 181 VERKLLLVKGSVPGA-TNSDVIVKPAVKA 208 >gi|317401537|gb|EFV82166.1| 50S ribosomal protein L3 [Achromobacter xylosoxidans C54] Length = 229 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 99/213 (46%), Positives = 131/213 (61%), Gaps = 3/213 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+V RK+GMT ++ EG IPVTVL + N +V ++L+ +GY A+QV G + V Sbjct: 12 RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQVKSLETDGYAAIQVAYGTRRASRV 71 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFS-PSYFTVGQLVDVTGMTIGKG 119 + G ++ L EFR+ G+V + S F GQ VDVTG TIGKG Sbjct: 72 PQAQTGHYAKAGAEAGSILKEFRLDPARAAEFSAGAVIAVESVFEAGQQVDVTGTTIGKG 131 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRHNFG RA+HG S SHR GS G QDPGR+F K+MAG +G TV+NL+V Sbjct: 132 FAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMAGHLGDVTRTVQNLDV 191 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +RGL+LVKG VPG + I+VR + K+ Sbjct: 192 VRVDVERGLLLVKGAVPG-HAGADIVVRPAIKA 223 >gi|190571546|ref|YP_001975904.1| ribosomal protein L3 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357818|emb|CAQ55274.1| ribosomal protein L3 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 240 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 98/217 (45%), Positives = 144/217 (66%), Gaps = 10/217 (4%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ +G T +Y + R+ VT+LHL ++ + DK GY +V +G G+ +K + Sbjct: 9 RIGLLMTNVGHTAMY-FDNSRMAVTLLHLSETYIIDIKGQDKCGYNSVILGTGD--LKKI 65 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPV--GSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP + ++ K KL+E R+ DL + G ++F VGQ +D+TG ++GKG Sbjct: 66 AKPQLEYLKKKGINSKCKLYESRLT---DLFGIECGKKVGVNHFVVGQYLDITGYSLGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKRHNF GLRA+HGVSI+HRS GSTG QDPGRVFK KKMAG +G +RVTV+N+++ Sbjct: 123 FAGVMKRHNFSGLRASHGVSIAHRSQGSTGQCQDPGRVFKGKKMAGHLGNSRVTVQNMKI 182 Query: 180 VSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVN 215 +S+D + +I VKG VPG KNS++ VRD+ K ++ Sbjct: 183 LSIDYENSIIAVKGNNVPGF-KNSYVFVRDAVKKPLH 218 >gi|255659503|ref|ZP_05404912.1| 50S ribosomal protein L3 [Mitsuokella multacida DSM 20544] gi|260848055|gb|EEX68062.1| 50S ribosomal protein L3 [Mitsuokella multacida DSM 20544] Length = 214 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 101/217 (46%), Positives = 136/217 (62%), Gaps = 5/217 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ RKLGMT ++ EG+ +PVTV+ N V+ ++T++ +GY AVQ+G GE K Sbjct: 1 MSKAILGRKLGMTQIFTEEGKVVPVTVVESGNNVVIQNKTVESDGYNAVQLGFGEVKENK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F VSP K + E R+ D VG F+ G+LVDVTG + GKGF Sbjct: 61 VNKPLKGHFEKAGVSPVKFIREMRLA-DASEYKVGDTIGVDIFSAGELVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCR-QDP-GRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KRHNF HG S SHR GSTG P GRV K KK+ GRMGG RVTV+ L Sbjct: 120 AGGIKRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLT 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 VV VD R LIL+KG +PG KK S+++++++ K N Sbjct: 179 VVRVDADRNLILIKGAIPGPKK-SFVVIKNTVKPGKN 214 >gi|52426103|ref|YP_089240.1| 50S ribosomal protein L3 [Mannheimia succiniciproducens MBEL55E] gi|81825476|sp|Q65QV5|RL3_MANSM RecName: Full=50S ribosomal protein L3 gi|52308155|gb|AAU38655.1| RplC protein [Mannheimia succiniciproducens MBEL55E] Length = 208 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 99/209 (47%), Positives = 132/209 (63%), Gaps = 3/209 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT ++ EG IPVTV+ ++ +V +TL+ +GY AVQV G K V+K Sbjct: 3 GLVGRKVGMTRIFTEEGVSIPVTVIEIEANRVTQVKTLENDGYSAVQVTTGSKKASRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V + L+EFR + ++ +G + F + VDVTG + GKGF G Sbjct: 63 PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQGG 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV VD Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 180 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+LVKG VPGA NS ++V+ + K+ Sbjct: 181 AERKLLLVKGAVPGA-TNSDVIVKPAVKA 208 >gi|289641166|ref|ZP_06473334.1| ribosomal protein L3 [Frankia symbiont of Datisca glomerata] gi|289509107|gb|EFD30038.1| ribosomal protein L3 [Frankia symbiont of Datisca glomerata] Length = 244 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 97/208 (46%), Positives = 125/208 (60%), Gaps = 2/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R IPVTV+ V RT D++GY AVQ+G GE + V++ Sbjct: 8 GLLGTKLGMTQVWDANNRVIPVTVIKAGPNVVTQVRTSDRDGYSAVQLGYGEIDPRRVTQ 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+RG F+ V P++ L E R + P G + F+ G +VDVTG + GKGF+G Sbjct: 68 PLRGHFARAGVPPRRHLVELRTADATNYRP-GQELTGEIFSAGSIVDVTGTSKGKGFAGV 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GL A HGV HRS GS G PGRVFK +MAGRMG RVT L + +VD Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGHERVTTAGLTIHAVD 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 +RG +LVKG VPG +LVR + K Sbjct: 187 TERGFLLVKGAVPG-PDGGLVLVRSAAK 213 >gi|256390140|ref|YP_003111704.1| 50S ribosomal protein L3 [Catenulispora acidiphila DSM 44928] gi|256356366|gb|ACU69863.1| ribosomal protein L3 [Catenulispora acidiphila DSM 44928] Length = 215 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 98/208 (47%), Positives = 125/208 (60%), Gaps = 2/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ KLGMT V++ R +PVTV+ C V R + +GY AVQ+ G K V+K Sbjct: 7 GVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQIRKQEIDGYEAVQIAYGAVKPTKVTK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V+P++ E R D +G + FT GQ+VDV+G + G GF+G Sbjct: 67 PEAGHFAKAGVTPRRYTVEIRT-TDAAEYSLGQEITAETFTQGQIVDVSGTSKGHGFAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF GL A HGV HRS GS G PGRVFK +MAGRMG RVTV+NL V +VD Sbjct: 126 MKRHNFKGLGAGHGVQRKHRSPGSIGACATPGRVFKGVRMAGRMGSARVTVQNLTVQAVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 ++GLILVKG +PG +LV+ S K Sbjct: 186 AEKGLILVKGAIPGP-NGGLVLVKTSVK 212 >gi|331005012|ref|ZP_08328419.1| LSU ribosomal protein L3p (L3e) [gamma proteobacterium IMCC1989] gi|330421178|gb|EGG95437.1| LSU ribosomal protein L3p (L3e) [gamma proteobacterium IMCC1989] Length = 212 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 99/211 (46%), Positives = 130/211 (61%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ +G IPVTV+ +D ++ ++ + +GY AVQV G K Sbjct: 1 MTIGLVGRKSGMTRIFAEDGASIPVTVIEVDPNRITQIKSTEVDGYNAVQVTVGSRKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK G FS N + ++E R + VG + + F VGQ VDVTG + GKGF Sbjct: 61 VSKSAAGHFSKANTEAGRGVWELR-NDAKEAFEVGGEITVAAFEVGQKVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF ATHG S+SHR+ GS G Q PGRVFKNKKMAG MG +VTV+ LEVV Sbjct: 120 AGGVKRWNFAMQDATHGNSLSHRAPGSIGQCQTPGRVFKNKKMAGHMGAEQVTVQTLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L+L+KG VPGA ++VR + K Sbjct: 180 RVDSERNLLLIKGAVPGAPGGD-VIVRPATK 209 >gi|170731682|ref|YP_001763629.1| 50S ribosomal protein L3 [Burkholderia cenocepacia MC0-3] gi|206558641|ref|YP_002229401.1| 50S ribosomal protein L3 [Burkholderia cenocepacia J2315] gi|212288250|sp|B1JU22|RL3_BURCC RecName: Full=50S ribosomal protein L3 gi|212288251|sp|B4E5C0|RL3_BURCJ RecName: Full=50S ribosomal protein L3 gi|169814924|gb|ACA89507.1| ribosomal protein L3 [Burkholderia cenocepacia MC0-3] gi|198034678|emb|CAR50545.1| 50S ribosomal protein L3 [Burkholderia cenocepacia J2315] Length = 216 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 94/200 (47%), Positives = 125/200 (62%), Gaps = 1/200 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR+ L G+V F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGADLFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RATHG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 121 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAK 199 +D +R L+LVKG +PGAK Sbjct: 181 ARIDAERKLLLVKGAIPGAK 200 >gi|317050528|ref|YP_004111644.1| 50S ribosomal protein L3 [Desulfurispirillum indicum S5] gi|316945612|gb|ADU65088.1| 50S ribosomal protein L3 [Desulfurispirillum indicum S5] Length = 209 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 98/196 (50%), Positives = 126/196 (64%), Gaps = 3/196 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEA-KVKNVSK 63 ++ +K+GMT ++ +G IPVTV+ C VV +T+D +GY AVQVG EA K K VSK Sbjct: 4 LIGKKIGMTQIFCEDGTVIPVTVVEAGPCTVVQVKTVDSDGYAAVQVGFEEALKEKRVSK 63 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ V+P++ L EFRV+ D VG + F G +DVTG + GKGF G Sbjct: 64 PLKGHFAKSGVAPQRHLKEFRVE-DPAGFSVGQQLTAEVFAAGDKIDVTGTSKGKGFQGV 122 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KRH FGG RATHG S HR+ GS G P R FKNKKM GRMGG TV+ LEVV V Sbjct: 123 IKRHGFGGGRATHG-STFHRAPGSIGMCATPSRTFKNKKMPGRMGGKTTTVQCLEVVKVM 181 Query: 184 DKRGLILVKGCVPGAK 199 + L+LVKG +PG+K Sbjct: 182 ADQNLLLVKGAIPGSK 197 >gi|255319815|ref|ZP_05361020.1| 50S ribosomal protein L3 [Acinetobacter radioresistens SK82] gi|262380348|ref|ZP_06073502.1| 50S ribosomal protein L3 [Acinetobacter radioresistens SH164] gi|255303134|gb|EET82346.1| 50S ribosomal protein L3 [Acinetobacter radioresistens SK82] gi|262297794|gb|EEY85709.1| 50S ribosomal protein L3 [Acinetobacter radioresistens SH164] Length = 212 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 95/213 (44%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY A+QV GE + Sbjct: 1 MAIGLVGRKCGMTRIFTEAGVSVPVTVIEVDPNRITQIKTLETDGYQAIQVTTGERRESR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFRV + + + VG+ F VGQ+VDVTG + GKG Sbjct: 61 VTNGQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGASIGVDLFAVGQIVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+ Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VS+D +R +++VKG +PGA ++VR + K+ Sbjct: 181 VSIDAERSVLVVKGAIPGATGGD-VIVRPTIKA 212 >gi|262373521|ref|ZP_06066799.1| 50S ribosomal protein L3 [Acinetobacter junii SH205] gi|262311274|gb|EEY92360.1| 50S ribosomal protein L3 [Acinetobacter junii SH205] Length = 214 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 95/213 (44%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY A+QV GE + Sbjct: 3 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAIQVTTGERRESR 62 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFRV + + + VG FTVGQ+VDVTG + GKG Sbjct: 63 VTSAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGSIGVDLFTVGQIVDVTGQSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+ Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VS+D +R +++VKG +PG+ ++VR + K+ Sbjct: 183 VSIDAERSVLVVKGAIPGSTGGD-VIVRPTIKA 214 >gi|319778743|ref|YP_004129656.1| LSU ribosomal protein L3p (L3e) [Taylorella equigenitalis MCE9] gi|317108767|gb|ADU91513.1| LSU ribosomal protein L3p (L3e) [Taylorella equigenitalis MCE9] Length = 233 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ RK+GM ++ EG IPVTVL + N +V ++++ +GY AVQV G + V Sbjct: 16 RLGLLGRKVGMMRIFTDEGESIPVTVLDVSNNRVTQVKSVETDGYAAVQVAYGTRRASRV 75 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFS-PSYFTVGQLVDVTGMTIGKG 119 +K G ++ V L EFR+ GSV + S F VGQ VDV G TIGKG Sbjct: 76 NKAQTGHYAKAGVEAGSILKEFRLDPAKAAEFSAGSVVAVDSVFQVGQKVDVQGTTIGKG 135 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRHNFG RA+HG S SHR GS G QDPGR+F K+M+G MG TV+NL++ Sbjct: 136 FAGTIKRHNFGAQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMSGHMGDVTRTVQNLDI 195 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +RGL+LVKG VPG KNS I+V + K Sbjct: 196 VRVDAERGLLLVKGAVPG-HKNSDIVVLPAIK 226 >gi|90415162|ref|ZP_01223111.1| 50S ribosomal protein L3 [Photobacterium profundum 3TCK] gi|90323709|gb|EAS40341.1| 50S ribosomal protein L3 [Photobacterium profundum 3TCK] Length = 209 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 91/195 (46%), Positives = 126/195 (64%), Gaps = 1/195 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT ++ EG IPVTV+ ++ +V ++L+ +GY A+Q+ G K VSK Sbjct: 3 GLIGRKVGMTRIFTEEGISIPVTVVEVEANRVTQVKSLETDGYNAIQITTGTKKANRVSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF GA Sbjct: 63 PAAGHFAKAGVEAGRGLWEFRLENGEEFT-VGAELNVELFNEVKKVDVTGTSKGKGFQGA 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 IKRWNFSTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKRGLILVKGCVPGA 198 +R L+L+KG VPG+ Sbjct: 182 AERNLLLIKGAVPGS 196 >gi|257454047|ref|ZP_05619321.1| 50S ribosomal protein L3 [Enhydrobacter aerosaccus SK60] gi|257448525|gb|EEV23494.1| 50S ribosomal protein L3 [Enhydrobacter aerosaccus SK60] Length = 212 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 96/214 (44%), Positives = 134/214 (62%), Gaps = 4/214 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V +K GMT ++ G IPVTV+ + ++ +T D +GY A+QV GE + Sbjct: 1 MAIGLVGKKCGMTRIFTEAGVSIPVTVVEVTANRISQIKTQDTDGYQAIQVTTGERRDSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLL--PVGSVFSPSYFTVGQLVDVTGMTIGK 118 V+ +G F+ V+ + +EFRV+ D +L GS + F VGQ+VDV G + GK Sbjct: 61 VNAAQKGHFAKAGVAAGRGTWEFRVE-DSELEGREAGSEIAADLFQVGQIVDVIGTSKGK 119 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G +KRHNF THG S+SHR GSTG Q PGRVFK KKM G+MG RVTV+ LE Sbjct: 120 GFQGGIKRHNFRSQDWTHGNSVSHRVVGSTGQNQTPGRVFKGKKMPGQMGNKRVTVQGLE 179 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V+SVD ++G++++KG +PGA ++VR S K+ Sbjct: 180 VISVDAEKGILVIKGAIPGANGGD-VIVRPSVKA 212 >gi|317049840|ref|YP_004117488.1| 50S ribosomal protein L3 [Pantoea sp. At-9b] gi|316951457|gb|ADU70932.1| 50S ribosomal protein L3 [Pantoea sp. At-9b] Length = 208 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 95/203 (46%), Positives = 130/203 (64%), Gaps = 2/203 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG+V +K+GMT ++ +G IPVTV+ ++ +V +TL+ +GY A+QV G K V+ Sbjct: 2 SGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKTLENDGYQAIQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR + ++ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRTEGEE--YSVGQNISVEIFAEVKKVDVTGTSKGKGFAG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++LEVV V Sbjct: 120 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLEVVRV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205 D +R L+LVKG VPGA + I+ Sbjct: 180 DAERNLLLVKGAVPGATGSDLIV 202 >gi|254246597|ref|ZP_04939918.1| Ribosomal protein L3 [Burkholderia cenocepacia PC184] gi|124871373|gb|EAY63089.1| Ribosomal protein L3 [Burkholderia cenocepacia PC184] Length = 220 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 94/200 (47%), Positives = 125/200 (62%), Gaps = 1/200 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 5 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 64 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR+ L G+V F VGQ VDV G++IGKG Sbjct: 65 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGADLFEVGQKVDVQGVSIGKG 124 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RATHG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 125 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 184 Query: 180 VSVDDKRGLILVKGCVPGAK 199 +D +R L+LVKG +PGAK Sbjct: 185 ARIDAERKLLLVKGAIPGAK 204 >gi|302869972|ref|YP_003838609.1| 50S ribosomal protein L3 [Micromonospora aurantiaca ATCC 27029] gi|315501433|ref|YP_004080320.1| 50S ribosomal protein l3 [Micromonospora sp. L5] gi|302572831|gb|ADL49033.1| 50S ribosomal protein L3 [Micromonospora aurantiaca ATCC 27029] gi|315408052|gb|ADU06169.1| 50S ribosomal protein L3 [Micromonospora sp. L5] Length = 221 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 96/215 (44%), Positives = 132/215 (61%), Gaps = 3/215 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ + +PVTV+ C V R+ DK+GY AVQ+ G + V K Sbjct: 7 GILGAKLGMTQVWD-NNKVVPVTVVQAGPCVVSQVRSADKDGYSAVQLAYGVIDPRKVKK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G ++ +V+P++ + E R D P G + F G ++DVTG T GKG++G Sbjct: 66 PIAGHYAKADVAPRRHIVELRTSDAADYAP-GQEVTVEEFPAGVVIDVTGKTKGKGYAGP 124 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GLRA+HGV HRS GS G PGRVFK +MAGRMGG R TV+NL V +VD Sbjct: 125 MKRHGFHGLRASHGVERKHRSPGSIGACATPGRVFKGTRMAGRMGGVRYTVQNLTVQAVD 184 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 + L+LV+G +PG K + +LVR + K+ V G Sbjct: 185 TENNLLLVRGAIPGP-KGALVLVRTAAKAKVKKGG 218 >gi|262377312|ref|ZP_06070536.1| 50S ribosomal protein L3 [Acinetobacter lwoffii SH145] gi|262307765|gb|EEY88904.1| 50S ribosomal protein L3 [Acinetobacter lwoffii SH145] Length = 214 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 93/213 (43%), Positives = 133/213 (62%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY A+Q+ GE + Sbjct: 3 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAIQITTGERRESR 62 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFR + D + VG + F VGQ+VDVTG + GKG Sbjct: 63 VTNAQKGHFAKAGVAAGRLVQEFRATEADLEGREVGGTLTVELFQVGQVVDVTGQSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVT + LE+ Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGAERVTTQGLEI 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V++D +R +++VKG VPGA ++VR + K+ Sbjct: 183 VAIDTERSVLVVKGAVPGATGGD-VIVRPTIKA 214 >gi|107024303|ref|YP_622630.1| 50S ribosomal protein L3 [Burkholderia cenocepacia AU 1054] gi|116688372|ref|YP_833995.1| 50S ribosomal protein L3 [Burkholderia cenocepacia HI2424] gi|123244306|sp|Q1BRU8|RL3_BURCA RecName: Full=50S ribosomal protein L3 gi|166233123|sp|A0K3M5|RL3_BURCH RecName: Full=50S ribosomal protein L3 gi|105894492|gb|ABF77657.1| LSU ribosomal protein L3P [Burkholderia cenocepacia AU 1054] gi|116646461|gb|ABK07102.1| LSU ribosomal protein L3P [Burkholderia cenocepacia HI2424] Length = 217 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 94/200 (47%), Positives = 125/200 (62%), Gaps = 1/200 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 2 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR+ L G+V F VGQ VDV G++IGKG Sbjct: 62 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGADLFEVGQKVDVQGVSIGKG 121 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RATHG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 122 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 181 Query: 180 VSVDDKRGLILVKGCVPGAK 199 +D +R L+LVKG +PGAK Sbjct: 182 ARIDAERKLLLVKGAIPGAK 201 >gi|37678559|ref|NP_933168.1| 50S ribosomal protein L3 [Vibrio vulnificus YJ016] gi|42559591|sp|Q7MPI8|RL3_VIBVY RecName: Full=50S ribosomal protein L3 gi|37197299|dbj|BAC93139.1| ribosomal protein L3 [Vibrio vulnificus YJ016] Length = 209 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 95/209 (45%), Positives = 133/209 (63%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ EG IPVTV+ ++ ++ +TL+ +GY A+QV AG K V+K Sbjct: 3 GLIGRKVGMTRVFTEEGVSIPVTVVEVEANRIAQVKTLETDGYAAIQVTAGTKKANRVNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF G Sbjct: 63 AEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPGA + ++V+ + K+ Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|238025932|ref|YP_002910163.1| 50S ribosomal protein L3 [Burkholderia glumae BGR1] gi|237875126|gb|ACR27459.1| Ribosomal protein L3 [Burkholderia glumae BGR1] Length = 220 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 92/200 (46%), Positives = 125/200 (62%), Gaps = 1/200 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 5 MSLGLVGRKVGMTRIFTADGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 64 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR+ L G++ P F VGQ VDV G++IGKG Sbjct: 65 VTKPLAGHLAKAGVEAGEILKEFRIDATKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 124 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RATHG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 125 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 184 Query: 180 VSVDDKRGLILVKGCVPGAK 199 +D +R L+LVKG +PG K Sbjct: 185 ARIDAERKLLLVKGAIPGTK 204 >gi|332107866|gb|EGJ09090.1| 50S ribosomal protein L3 [Rubrivivax benzoatilyticus JA2] Length = 223 Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 98/210 (46%), Positives = 129/210 (61%), Gaps = 4/210 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G IPVTVL + N +V +T+ +GY A+QV G K V+K Sbjct: 8 GLLGRKVGMMRIFTDDGDAIPVTVLDVSNNRVTQVKTVATDGYSALQVAFGARKASRVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKD--DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 P G + V + L EFRV + P G+V S F GQLVDV G +IGKG++ Sbjct: 68 PEAGHLAKAGVEAGEVLKEFRVTAEIAGQYQP-GAVVPVSLFAAGQLVDVQGTSIGKGYA 126 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNFG RA+HG S SH GS QDPGRVF KKM G MG VT +NL++V Sbjct: 127 GTIKRHNFGSQRASHGNSRSHNVPGSISMAQDPGRVFPGKKMTGHMGDETVTTQNLDIVR 186 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD+ R L+LV+G VPGA KN ++VR + K Sbjct: 187 VDEARSLLLVRGAVPGA-KNGHVVVRPAVK 215 >gi|256821662|ref|YP_003145625.1| 50S ribosomal protein L3 [Kangiella koreensis DSM 16069] gi|256795201|gb|ACV25857.1| ribosomal protein L3 [Kangiella koreensis DSM 16069] Length = 210 Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 99/212 (46%), Positives = 128/212 (60%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V K GMT V+ +G IPVTV+ D ++ +T D +GY AVQ+ G K Sbjct: 1 MAIGIVGIKRGMTRVFTEDGVSIPVTVVEADPNRIAQLKTTDVDGYEAVQITTGSRKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SK G + V + L+EFRV D VG V F GQ VDVTG + GKG+ Sbjct: 61 ISKAEAGHYKKAGVEAGRSLWEFRVNSLDGF-EVGGVVKVDIFEAGQKVDVTGTSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF G +THG S+SHR+ GS G Q PGRVFK KKM+G MG RVTV+ LEVV Sbjct: 120 AGVIKRWNFRGQDSTHGNSLSHRAPGSIGQNQTPGRVFKGKKMSGHMGAERVTVQTLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA ++VR + K+ Sbjct: 180 RVDAERNLLLIKGAVPGATGGD-VIVRPAEKA 210 >gi|254516911|ref|ZP_05128969.1| ribosomal protein L3 [gamma proteobacterium NOR5-3] gi|219674416|gb|EED30784.1| ribosomal protein L3 [gamma proteobacterium NOR5-3] Length = 231 Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 97/211 (45%), Positives = 128/211 (60%), Gaps = 1/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT V+ +G IPVTV+ + +V + D +GY ++QV AG K Sbjct: 21 MTIGLVGRKSGMTRVFTEDGASIPVTVVEVSPNRVTQIKENDSDGYRSIQVTAGSRKAAK 80 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK G F+ V + L+EFR+ +D+ VG+ + F GQ VDV G + GKGF Sbjct: 81 VSKSEAGLFAKAGVEAGRGLWEFRLSAEDESFEVGAELTVERFEEGQKVDVAGKSKGKGF 140 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF ATHG S+SHR+ GS G Q PGRVFK KKM+G+MG VTV+ LE+V Sbjct: 141 QGVIKRWNFSMQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMSGQMGNANVTVQGLEIV 200 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L+L+KG VPGA + VR + K Sbjct: 201 RVDAERNLLLIKGAVPGAPGGD-VFVRPAVK 230 >gi|226198141|ref|ZP_03793712.1| 50S ribosomal protein L3 [Burkholderia pseudomallei Pakistan 9] gi|225929661|gb|EEH25677.1| 50S ribosomal protein L3 [Burkholderia pseudomallei Pakistan 9] Length = 208 Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 91/189 (48%), Positives = 120/189 (63%), Gaps = 1/189 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++ EG IPVTVL + + +V +T++ +GY AVQV G + V+KP+ G + Sbjct: 1 MTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASRVTKPLAGHLAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130 V + L EFR++ D L G+V P F VGQ VDV G++IGKG++G +KR+NFG Sbjct: 61 AGVEAGEILKEFRIEADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKGYAGTIKRYNFG 120 Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190 RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+ +D R L+L Sbjct: 121 SGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEIARIDADRKLLL 180 Query: 191 VKGCVPGAK 199 VKG VPGAK Sbjct: 181 VKGAVPGAK 189 >gi|114330574|ref|YP_746796.1| ribosomal protein L3 [Nitrosomonas eutropha C91] gi|122314432|sp|Q0AIJ5|RL3_NITEC RecName: Full=50S ribosomal protein L3 gi|114307588|gb|ABI58831.1| LSU ribosomal protein L3P [Nitrosomonas eutropha C91] Length = 217 Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 93/215 (43%), Positives = 136/215 (63%), Gaps = 3/215 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +K+GMT ++ G +PVTVL + +VV +T +++GY A+Q+ G + Sbjct: 1 MKLGLIGKKVGMTRIFTESGSSVPVTVLDVSKNRVVQIKTAERDGYSAIQLTQGYRRKNR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD--DDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 ++K + G F+ V K + EFR+++ + L +GS + F G VDV+G++IGK Sbjct: 61 ITKALSGHFARAGVEAGKVIKEFRIEQQAINSDLKLGSEINVEIFLTGSKVDVSGVSIGK 120 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G++G +KRHNF RA+HG S SH GS G QDPGRVF KKM GR+GG T++N+E Sbjct: 121 GYAGTIKRHNFSSSRASHGNSRSHNVPGSIGMAQDPGRVFPGKKMTGRLGGVNSTIQNIE 180 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VV VD RGLI +KG VPG+K N + +R S K A Sbjct: 181 VVRVDTVRGLIFLKGSVPGSKGN-GVFIRPSVKHA 214 >gi|212634829|ref|YP_002311354.1| 50S ribosomal protein L3 [Shewanella piezotolerans WP3] gi|226730567|sp|B8CND3|RL3_SHEPW RecName: Full=50S ribosomal protein L3 gi|212556313|gb|ACJ28767.1| Ribosomal protein L3 [Shewanella piezotolerans WP3] Length = 212 Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 92/206 (44%), Positives = 127/206 (61%), Gaps = 1/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++N +G +PVTV+ + +V +TLD +GY A+QV G K Sbjct: 1 MAIGLIGRKVGMTRIFNEDGASVPVTVIEIAANRVTQVKTLDTDGYRALQVTTGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G F+ V + L+E R+ D + + VG+ + F VDVTG + GKG Sbjct: 61 ITKPEAGHFAKAGVEAGRGLWELRLADGDGEGIEVGAELNVDIFADIAKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF THG S++HRS+GS G Q PGRVFK KKM+G MG RVT +NL++ Sbjct: 121 FQGGIKRWNFHAQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205 V VD +R L+LVKG VPGA I+ Sbjct: 181 VRVDAERNLLLVKGAVPGATNGDLII 206 >gi|310821093|ref|YP_003953451.1| 50S ribosomal protein L3 [Stigmatella aurantiaca DW4/3-1] gi|309394165|gb|ADO71624.1| 50S ribosomal protein L3 [Stigmatella aurantiaca DW4/3-1] Length = 223 Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 98/220 (44%), Positives = 136/220 (61%), Gaps = 3/220 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V+N EG +PVTV+ + CQVV RT +K+ Y AV +G GE + K +++ Sbjct: 3 GLIGKKIGMTQVFNDEGNLVPVTVVDVSTCQVVGKRTPEKDQYSAVTLGFGEIREKVLNQ 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 RGFF + + ++ L EFRV +D VG FT GQLVDVTG T G+GFSG Sbjct: 63 AQRGFFKKNSAALRRHLKEFRVTPEDAAQFNVGDAVKADLFTKGQLVDVTGTTKGRGFSG 122 Query: 123 AMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 M+R +F G + THG R G+ G R+ PGR + NKKM G G +VT +NL VV Sbjct: 123 VMRRWSFKGSQTKTHGTHEYQRHPGAIGQRKTPGRTYPNKKMPGHYGVEQVTTQNLTVVD 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 VD ++GL+L+KG VPG ++ + VR S K A+ + K S Sbjct: 183 VDTEKGLLLIKGAVPG-HNDAIVYVRPSVKVALRAQHKAS 221 >gi|315655881|ref|ZP_07908779.1| 50S ribosomal protein L3 [Mobiluncus curtisii ATCC 51333] gi|315656193|ref|ZP_07909084.1| 50S ribosomal protein L3 [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315489945|gb|EFU79572.1| 50S ribosomal protein L3 [Mobiluncus curtisii ATCC 51333] gi|315493195|gb|EFU82795.1| 50S ribosomal protein L3 [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 218 Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 93/209 (44%), Positives = 130/209 (62%), Gaps = 2/209 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RKLGMT V++ +G+ IPVTV+ ++ V RT + +GY AVQ+G G+ + V+KP Sbjct: 12 LLGRKLGMTQVWDEDGKLIPVTVVQVEKNVVTQIRTNETDGYDAVQLGFGKMDERKVTKP 71 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M G F+ V P++ L E R D +G F G LVDV+G T GKGF+G M Sbjct: 72 MAGHFAKAGVEPRRHLAEIRT-GDASSYELGQELGAEVFEAGTLVDVSGNTKGKGFAGVM 130 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH F G+ A+HG +HR GS G PGRVFK MAGRMGGNR T+ NL+V +VD Sbjct: 131 KRHGFQGVSASHGAHRNHRKPGSIGACATPGRVFKGLNMAGRMGGNRRTIMNLKVQAVDA 190 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+++ G +PG K +++R + K A Sbjct: 191 EKGLVVLTGAIPGP-KGGIVMIRSAVKGA 218 >gi|251787971|ref|YP_003002692.1| 50S ribosomal protein L3 [Dickeya zeae Ech1591] gi|247536592|gb|ACT05213.1| ribosomal protein L3 [Dickeya zeae Ech1591] Length = 209 Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 97/202 (48%), Positives = 129/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ EG IPVTV+ ++ +V +TL+ +GY AVQV AG K V+K Sbjct: 3 GLVGKKVGMTRIFTEEGVSIPVTVIEIEANRVTQVKTLENDGYRAVQVTAGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L EFR+ D + VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRVLREFRLA-DSEEFAVGQDISVEIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|298500580|ref|ZP_07010384.1| LSU ribosomal protein L3 [Vibrio cholerae MAK 757] gi|297540749|gb|EFH76806.1| LSU ribosomal protein L3 [Vibrio cholerae MAK 757] Length = 209 Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 95/208 (45%), Positives = 133/208 (63%), Gaps = 2/208 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV G K V+KP Sbjct: 4 LIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGSKKANRVTKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF GA+ Sbjct: 64 EAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQGAV 122 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 123 KRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVDA 182 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPGA + ++V+ + K+ Sbjct: 183 ERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|170729009|ref|YP_001763035.1| 50S ribosomal protein L3 [Shewanella woodyi ATCC 51908] gi|226730568|sp|B1KMY3|RL3_SHEWM RecName: Full=50S ribosomal protein L3 gi|169814356|gb|ACA88940.1| ribosomal protein L3 [Shewanella woodyi ATCC 51908] Length = 212 Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 93/206 (45%), Positives = 128/206 (62%), Gaps = 1/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G IPVTV+ + +V RTL+ +GY A+QV G K Sbjct: 1 MAIGLIGRKVGMTRIFTEDGASIPVTVIEIAANRVTQVRTLETDGYRALQVTTGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G F+ V + L+E R+ D+ + + VG+ + F VDVTG + GKG Sbjct: 61 ITKPEAGHFAKAGVEAGRGLWEVRLADDEGEGIEVGAELNVDIFADVAKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF THG S++HRS+GS G Q PGRVFK KKM+G MG RVT +NL+V Sbjct: 121 FQGGIKRWNFHAQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205 V VD +R L+LVKG VPGA + I+ Sbjct: 181 VRVDAERNLLLVKGAVPGATNGNLII 206 >gi|152978141|ref|YP_001343770.1| 50S ribosomal protein L3 [Actinobacillus succinogenes 130Z] gi|171472958|sp|A6VLI8|RL3_ACTSZ RecName: Full=50S ribosomal protein L3 gi|150839864|gb|ABR73835.1| ribosomal protein L3 [Actinobacillus succinogenes 130Z] Length = 208 Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 99/209 (47%), Positives = 132/209 (63%), Gaps = 3/209 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY AVQV G K V+K Sbjct: 3 GLVGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKASRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V + L+EFR + ++ +G + F + VDVTG + GKGF G Sbjct: 63 PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQGG 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV VD Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 180 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+LVKG VPGA NS ++V+ + K+ Sbjct: 181 AERKLLLVKGAVPGA-TNSDVIVKPAVKA 208 >gi|317054766|ref|YP_004103233.1| 50S ribosomal protein L3 [Ruminococcus albus 7] gi|315447035|gb|ADU20599.1| 50S ribosomal protein L3 [Ruminococcus albus 7] Length = 212 Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 92/211 (43%), Positives = 133/211 (63%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +K+GMT +++ G+ +PVTV+ C VV +T++K+GY AVQ+G GE + K Sbjct: 1 MQKGIIGKKIGMTQIFDEAGKIVPVTVVEAGPCVVVQKKTVEKDGYEAVQLGYGEIRAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F +V+ K+ L EFR+ D + VG + F G +VDV+G + G GF Sbjct: 61 VNKPLQGHFKKADVAIKRTLKEFRLA-DISAVNVGDIVKADVFAEGDVVDVSGTSKGHGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG +KRHN L+ THG HR GS G DP R++K KKM G+ G +VTV+NL VV Sbjct: 120 SGTIKRHNGHRLKETHGTGPVHRHAGSYGACSDPSRIYKGKKMPGQYGNVKVTVQNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + LI +KG +PG KN + + DS K Sbjct: 180 KVDAENNLIAIKGAIPGP-KNGTVTICDSVK 209 >gi|262203624|ref|YP_003274832.1| 50S ribosomal protein L3 [Gordonia bronchialis DSM 43247] gi|262086971|gb|ACY22939.1| 50S ribosomal protein L3 [Gordonia bronchialis DSM 43247] Length = 219 Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 94/208 (45%), Positives = 128/208 (61%), Gaps = 2/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ + RT D++GY AVQ+ G + V+K Sbjct: 9 GILGTKLGMTQVFDENNRVVPVTVIQAGPNVITQLRTADRDGYTAVQLAYGAIDPRKVTK 68 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G +S V+P++ L E RV D VG + F G LVDVTG + GKGF+G Sbjct: 69 PVAGQYSKAGVTPRRHLAEIRVN-DVSEFEVGQELTAEVFAEGSLVDVTGTSKGKGFAGV 127 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GL A+HG HR+ GS G PGRVFK +MAGRMG ++VT +NL V VD Sbjct: 128 MKRHGFSGLGASHGAHRVHRAPGSIGGCATPGRVFKGMRMAGRMGNDKVTTQNLTVHKVD 187 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 + GL+L+KG +PG +K ++VRD+ K Sbjct: 188 AEAGLLLIKGAIPG-RKGGIVVVRDAVK 214 >gi|330906708|ref|XP_003295571.1| hypothetical protein PTT_01689 [Pyrenophora teres f. teres 0-1] gi|311333041|gb|EFQ96334.1| hypothetical protein PTT_01689 [Pyrenophora teres f. teres 0-1] Length = 331 Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 92/200 (46%), Positives = 132/200 (66%), Gaps = 3/200 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G++A K GMT +Y+ E G+R TVL +D +VV H+ +KNGY AVQ+GAG+ + + Sbjct: 84 LRTGLLAIKKGMTSMYDPETGKRAACTVLQVDRNEVVAHKRREKNGYWAVQIGAGQKEAR 143 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGK 118 NV++PM G F++ VSPK+ + EF V+ + L + +G + ++FT GQ VDV G GK Sbjct: 144 NVTRPMLGHFAAAGVSPKRWVAEFEVRDEAGLQVGIGEMVGANWFTKGQFVDVKGTNKGK 203 Query: 119 GFSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 GF+G MKRH FGG A+HG S+ HR + G + RV K+M G MG TVKNL Sbjct: 204 GFAGGMKRHGFGGQPASHGQSLMHRGMGSAGGSQGSGSRVLPGKRMPGNMGNQSCTVKNL 263 Query: 178 EVVSVDDKRGLILVKGCVPG 197 +V+ VD+ G+++V GCVPG Sbjct: 264 KVLQVDEANGIVVVNGCVPG 283 >gi|226939186|ref|YP_002794257.1| 50S ribosomal protein L3 [Laribacter hongkongensis HLHK9] gi|254803677|sp|C1DAR7|RL3_LARHH RecName: Full=50S ribosomal protein L3 gi|226714110|gb|ACO73248.1| RplC [Laribacter hongkongensis HLHK9] Length = 214 Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 97/207 (46%), Positives = 128/207 (61%), Gaps = 1/207 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V+ +G+ IPVTVL + +V +T D +GY AVQV G K Sbjct: 1 MSLGLVGRKVGMTRVFAEDGQSIPVTVLDMSANRVTQIKTADTDGYNAVQVAYGSKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V K G F+ V + L EF L VG + F VGQLVDVTG + GKG Sbjct: 61 VLKAEAGHFAKAGVEAGRGLKEFTADAAKLAELKVGDTLTVELFQVGQLVDVTGTSQGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNF RA+HG S++ R+ GS G QDPGRVF K+MAG+ G + TV++LEV Sbjct: 121 FSGVIKRHNFSSNRASHGNSVTTRAPGSIGQAQDPGRVFPGKRMAGQYGNVKRTVQSLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILV 206 V +D +R L+L+KG VPG+K N +++ Sbjct: 181 VRIDAERQLLLIKGSVPGSKGNDVVVL 207 >gi|298345472|ref|YP_003718159.1| 50S ribosomal protein L3 [Mobiluncus curtisii ATCC 43063] gi|304391028|ref|ZP_07372980.1| 50S ribosomal protein L3 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|298235533|gb|ADI66665.1| 50S ribosomal protein L3 [Mobiluncus curtisii ATCC 43063] gi|304325911|gb|EFL93157.1| 50S ribosomal protein L3 [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 217 Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 93/209 (44%), Positives = 130/209 (62%), Gaps = 2/209 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RKLGMT V++ +G+ IPVTV+ ++ V RT + +GY AVQ+G G+ + V+KP Sbjct: 11 LLGRKLGMTQVWDEDGKLIPVTVVQVEKNVVTQIRTNETDGYDAVQLGFGKMDERKVTKP 70 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M G F+ V P++ L E R D +G F G LVDV+G T GKGF+G M Sbjct: 71 MAGHFAKAGVEPRRHLAEIRT-GDASSYELGQELGAEVFEAGTLVDVSGNTKGKGFAGVM 129 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH F G+ A+HG +HR GS G PGRVFK MAGRMGGNR T+ NL+V +VD Sbjct: 130 KRHGFQGVSASHGAHRNHRKPGSIGACATPGRVFKGLNMAGRMGGNRRTIMNLKVQAVDA 189 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+++ G +PG K +++R + K A Sbjct: 190 EKGLVVLTGAIPGP-KGGIVMIRSAVKGA 217 >gi|239929514|ref|ZP_04686467.1| 50S ribosomal protein L3 [Streptomyces ghanaensis ATCC 14672] gi|291437839|ref|ZP_06577229.1| 50S ribosomal protein L3 [Streptomyces ghanaensis ATCC 14672] gi|291340734|gb|EFE67690.1| 50S ribosomal protein L3 [Streptomyces ghanaensis ATCC 14672] Length = 214 Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 97/210 (46%), Positives = 128/210 (60%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ GE + V+K Sbjct: 7 GILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 67 PLKGHFAKADVTPRRHLVEIRTS-DASEYTLGQEVTAEVFEAGVKVDVTGKSKGKGFAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNFGGL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +VD Sbjct: 126 MKRHNFGGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+KG VPG +LVR + K A Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214 >gi|326793558|ref|YP_004311378.1| 50S ribosomal protein L3 [Marinomonas mediterranea MMB-1] gi|326544322|gb|ADZ89542.1| 50S ribosomal protein L3 [Marinomonas mediterranea MMB-1] Length = 212 Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 94/201 (46%), Positives = 126/201 (62%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 +V RK GMT ++N +G +PVTV+ ++ +V +T + +GY AVQV GE + V+K Sbjct: 5 LVGRKAGMTRIFNEDGVSVPVTVIEVEPNRVTQVKTAETDGYSAVQVTVGERRANRVNKA 64 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G F+ NV + L+EFR+ + + VG + + F VDVTG + GKGF G + Sbjct: 65 AAGHFAKANVEAGRGLWEFRLAGGEKEINVGDELTVADFESVTTVDVTGQSKGKGFQGGI 124 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHNF ATHG S+SHR+ GS G Q PGRV+K KKMAG MG +VT ++LEVV VD Sbjct: 125 KRHNFSMQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGHMGAAQVTTQSLEVVRVDA 184 Query: 185 KRGLILVKGCVPGAKKNSWIL 205 +R LILVKG VPGA +L Sbjct: 185 ERNLILVKGAVPGATNGDVVL 205 >gi|308178136|ref|YP_003917542.1| 50S ribosomal protein L3 [Arthrobacter arilaitensis Re117] gi|307745599|emb|CBT76571.1| 50S ribosomal protein L3 [Arthrobacter arilaitensis Re117] Length = 216 Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 92/210 (43%), Positives = 129/210 (61%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ IPVTV+ D+ V +++GY AVQ+G G+ + V+K Sbjct: 9 GLLGTKLGMTQVWDSNNNLIPVTVVQADSNVVTKLINEERDGYTAVQIGYGQIDPRKVTK 68 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F + V+P++ L E R D G S F GQ VDV G + GKGF+G Sbjct: 69 PLAGHFEAAGVTPRRHLVELRT-ADAAEYTAGQELSVEVFEAGQKVDVVGTSKGKGFAGV 127 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF G+ A+HG +HR GS G PGRVF+ +KMAGRMG RVT +NL + ++D Sbjct: 128 MKRHNFHGVGASHGAHKNHRKPGSIGGASTPGRVFRGQKMAGRMGAERVTTQNLTIHAID 187 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++ L+L+KG VPGA + +LVR++ K A Sbjct: 188 AEKNLLLIKGAVPGA-RGRVVLVRNAVKGA 216 >gi|294630893|ref|ZP_06709453.1| 50S ribosomal protein L3 [Streptomyces sp. e14] gi|292834226|gb|EFF92575.1| 50S ribosomal protein L3 [Streptomyces sp. e14] Length = 214 Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 97/210 (46%), Positives = 128/210 (60%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ GE + V+K Sbjct: 7 GILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 67 PLKGHFAKADVTPRRHLVEIRTA-DAAEYTLGQEITAEVFEAGVKVDVTGKSKGKGFAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNFGGL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +VD Sbjct: 126 MKRHNFGGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+KG VPG +LVR + K A Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214 >gi|196003476|ref|XP_002111605.1| hypothetical protein TRIADDRAFT_3973 [Trichoplax adhaerens] gi|190585504|gb|EDV25572.1| hypothetical protein TRIADDRAFT_3973 [Trichoplax adhaerens] Length = 250 Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 92/210 (43%), Positives = 135/210 (64%), Gaps = 3/210 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA-GEAKVKN 60 R+G++ KLGM ++ +G R+PVT++ + C V+ ++T K+GY AVQVGA K+ Sbjct: 14 RTGLIGVKLGMMPMWMKDGTRVPVTLIKIQQCHVLHNKTKAKDGYCAVQVGAVDRLKLLY 73 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V + G F+ V+PK+K++EF+V DD L+ G++ +F GQ VDV TIGKGF Sbjct: 74 VRRAQLGHFARAGVNPKRKVWEFKVS-DDALILRGTLLHAMHFVPGQYVDVKAKTIGKGF 132 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G MK+H G ATHGVS++HR G+TG Q+PGR++ KKMAGRMG T KNL ++ Sbjct: 133 QGVMKKHGMKGQPATHGVSLTHRKMGATGGGQEPGRIWPGKKMAGRMGNKYHTTKNLRIL 192 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 ++ K ++ VKG VPG +N +I + D+ Sbjct: 193 RINTKYDILYVKGAVPG-HENQFIRITDAI 221 >gi|302390958|ref|YP_003826778.1| 50S ribosomal protein L3P [Acetohalobium arabaticum DSM 5501] gi|302203035|gb|ADL11713.1| LSU ribosomal protein L3P [Acetohalobium arabaticum DSM 5501] Length = 209 Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 92/211 (43%), Positives = 134/211 (63%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ +K+GMT +++ EG IPVTV+ C +V +T +K+GY A+Q+G GEAK Sbjct: 1 MTREILGKKVGMTQIFDDEGEVIPVTVIEAGPCSIVQKKTEEKDGYKAIQLGFGEAKESK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP++G F V PK+ + E R+ ++D+ VG F VG VDVTG + GKGF Sbjct: 61 LNKPLKGHFDKYGVEPKEYIREVRINEEDE-YEVGDEIKADIFAVGDRVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF THG S ++R GS G DP RVFK KKM GRMG +VT++NL+V Sbjct: 120 AGTVKRWNFNLGPKTHG-SRNYRLPGSIGASADPARVFKGKKMPGRMGREQVTIQNLKVA 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD ++ ++ VKG VPG KK + + +++S K Sbjct: 179 KVDPEKNILAVKGAVPGPKK-ALVRIKESVK 208 >gi|189195810|ref|XP_001934243.1| 50S ribosomal protein L3 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187980122|gb|EDU46748.1| 50S ribosomal protein L3 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 332 Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 92/200 (46%), Positives = 132/200 (66%), Gaps = 3/200 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G++A K GMT +Y+ E G+R TVL +D +VV H+ +KNGY AVQ+GAG+ + + Sbjct: 84 LRTGLLAIKKGMTSMYDPETGKRAACTVLQVDRNEVVAHKRREKNGYWAVQIGAGQKEAR 143 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGK 118 NV++PM G F++ VSPK+ + EF V+ + L + +G + ++FT GQ VDV G GK Sbjct: 144 NVTRPMLGHFAAAGVSPKRWVAEFEVRDEAGLQVGIGEMVGANWFTQGQFVDVKGTNKGK 203 Query: 119 GFSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 GF+G MKRH FGG A+HG S+ HR + G + RV K+M G MG TVKNL Sbjct: 204 GFAGGMKRHGFGGQPASHGQSLMHRGMGSAGGSQGSGSRVLPGKRMPGNMGNQSCTVKNL 263 Query: 178 EVVSVDDKRGLILVKGCVPG 197 +V+ VD+ G+++V GCVPG Sbjct: 264 KVLQVDEANGIVVVGGCVPG 283 >gi|115378276|ref|ZP_01465444.1| ribosomal protein L3 [Stigmatella aurantiaca DW4/3-1] gi|115364718|gb|EAU63785.1| ribosomal protein L3 [Stigmatella aurantiaca DW4/3-1] Length = 259 Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 98/220 (44%), Positives = 136/220 (61%), Gaps = 3/220 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V+N EG +PVTV+ + CQVV RT +K+ Y AV +G GE + K +++ Sbjct: 39 GLIGKKIGMTQVFNDEGNLVPVTVVDVSTCQVVGKRTPEKDQYSAVTLGFGEIREKVLNQ 98 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 RGFF + + ++ L EFRV +D VG FT GQLVDVTG T G+GFSG Sbjct: 99 AQRGFFKKNSAALRRHLKEFRVTPEDAAQFNVGDAVKADLFTKGQLVDVTGTTKGRGFSG 158 Query: 123 AMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 M+R +F G + THG R G+ G R+ PGR + NKKM G G +VT +NL VV Sbjct: 159 VMRRWSFKGSQTKTHGTHEYQRHPGAIGQRKTPGRTYPNKKMPGHYGVEQVTTQNLTVVD 218 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 VD ++GL+L+KG VPG ++ + VR S K A+ + K S Sbjct: 219 VDTEKGLLLIKGAVPG-HNDAIVYVRPSVKVALRAQHKAS 257 >gi|170700694|ref|ZP_02891689.1| ribosomal protein L3 [Burkholderia ambifaria IOP40-10] gi|171318348|ref|ZP_02907506.1| ribosomal protein L3 [Burkholderia ambifaria MEX-5] gi|172059341|ref|YP_001806993.1| 50S ribosomal protein L3 [Burkholderia ambifaria MC40-6] gi|212288249|sp|B1YRD0|RL3_BURA4 RecName: Full=50S ribosomal protein L3 gi|170134364|gb|EDT02697.1| ribosomal protein L3 [Burkholderia ambifaria IOP40-10] gi|171096426|gb|EDT41325.1| ribosomal protein L3 [Burkholderia ambifaria MEX-5] gi|171991858|gb|ACB62777.1| ribosomal protein L3 [Burkholderia ambifaria MC40-6] Length = 216 Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 93/200 (46%), Positives = 125/200 (62%), Gaps = 1/200 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR+ L G+V F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGADLFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RATHG S SH GS G QDPGRVF K+M G +G VTV+NLE+ Sbjct: 121 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAK 199 +D +R L+LVKG +PGAK Sbjct: 181 ARIDAERKLLLVKGAIPGAK 200 >gi|91774635|ref|YP_544391.1| 50S ribosomal protein L3P [Methylobacillus flagellatus KT] gi|122985649|sp|Q1H4N7|RL3_METFK RecName: Full=50S ribosomal protein L3 gi|91708622|gb|ABE48550.1| LSU ribosomal protein L3P [Methylobacillus flagellatus KT] Length = 214 Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 97/214 (45%), Positives = 132/214 (61%), Gaps = 6/214 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ EG +PVTVL + +V +T +GY ++QV GE + Sbjct: 1 MSLGLIGRKVGMTRIFTDEGESVPVTVLEVVPNRVTQIKTAASDGYTSLQVAYGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP---VGSVFSPSYFTVGQLVDVTGMTIG 117 + K + G ++ VS + EF V DD+L VG + F GQLVDVTG ++G Sbjct: 61 IGKALAGHYAKAGVSAGAGIKEFPV--SDDVLANYSVGGQITVELFQPGQLVDVTGTSLG 118 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGFSGA+KRHNF RA+HG S SH GS G QDPGRVF K+M G +G + TV+NL Sbjct: 119 KGFSGAIKRHNFSSNRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMPGHLGAVKTTVQNL 178 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 E+V VD +R L+L+KG VPG+K ++VR S K Sbjct: 179 EIVRVDAERNLLLIKGAVPGSKGGD-VVVRPSVK 211 >gi|291451913|ref|ZP_06591303.1| 50S ribosomal protein L3 [Streptomyces albus J1074] gi|291354862|gb|EFE81764.1| 50S ribosomal protein L3 [Streptomyces albus J1074] Length = 214 Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 97/210 (46%), Positives = 127/210 (60%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ V RT D +GY AVQ+ GE + V+K Sbjct: 7 GILGEKLGMTQVWDENNRVVPVTVVKAGANVVTQVRTNDTDGYEAVQIAFGEIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 67 PLKGHFAKADVTPRRHLVEIRTA-DASEYTLGQELNADTFEAGLKVDVTGKSKGKGFAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +VD Sbjct: 126 MKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+KG VPG +LVR + K A Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214 >gi|159463470|ref|XP_001689965.1| mitochondrial ribosomal protein L3 [Chlamydomonas reinhardtii] gi|158283953|gb|EDP09703.1| mitochondrial ribosomal protein L3 [Chlamydomonas reinhardtii] Length = 285 Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 95/209 (45%), Positives = 132/209 (63%), Gaps = 2/209 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+G +A K GMT ++ G R+P+TVL +D CQVV +T +GY A+ +G+G + K Sbjct: 6 LRTGCIATKAGMTQEWDEHGVRVPLTVLWVDECQVVGLKTRPVHGYNALMLGSGYKRQKC 65 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +S GFF V KK + E++V +D L+PVG+ +++ GQ VDVTG T KGF Sbjct: 66 MSPSEAGFFLKAGVPFKKLVAEWQVS-EDALVPVGTAIGAAHYVAGQRVDVTGWTKWKGF 124 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G M+R F GL A+HGVS+SHR+ GS G RQDPG+++K KK+ G MG R TV N V Sbjct: 125 QGVMRRWGFKGLPASHGVSLSHRAPGSIGNRQDPGKIWKGKKLPGCMGDERRTVHNCLVY 184 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VD R L+ ++G VPG S + +RDS Sbjct: 185 KVDAARNLVYLRGQVPGPVGRS-VFLRDS 212 >gi|269976879|ref|ZP_06183853.1| 50S ribosomal protein L3 [Mobiluncus mulieris 28-1] gi|306819491|ref|ZP_07453198.1| 50S ribosomal protein L3 [Mobiluncus mulieris ATCC 35239] gi|269934710|gb|EEZ91270.1| 50S ribosomal protein L3 [Mobiluncus mulieris 28-1] gi|304647783|gb|EFM45101.1| 50S ribosomal protein L3 [Mobiluncus mulieris ATCC 35239] Length = 218 Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 89/207 (42%), Positives = 130/207 (62%), Gaps = 2/207 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RKLGMT V++ EG+ +PVTV+ ++ V RT +++GY A+Q+G G+ + V+KP Sbjct: 12 LLGRKLGMTQVWDEEGKLVPVTVVEVEKNVVTDIRTPERDGYTALQLGFGQLDERKVTKP 71 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M G F+ V+P++ L E R D D +G F G LVDVTG T GKGF+G M Sbjct: 72 MAGHFAKSGVTPRRHLAEVRTT-DADSYELGQELGADLFETGALVDVTGNTKGKGFAGVM 130 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH F G+ ++HG +HR GS G PGRVF+ MAGRMGG R T+ NL+V ++D Sbjct: 131 KRHGFQGVSSSHGAHRNHRKPGSIGACATPGRVFRGLNMAGRMGGERRTIMNLKVQAIDA 190 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211 +GL+++ G +PG K +++R + K Sbjct: 191 DKGLVVIAGAIPGP-KGGIVMIRSAVK 216 >gi|115350322|ref|YP_772161.1| 50S ribosomal protein L3 [Burkholderia ambifaria AMMD] gi|134294443|ref|YP_001118178.1| 50S ribosomal protein L3 [Burkholderia vietnamiensis G4] gi|122324266|sp|Q0BJ46|RL3_BURCM RecName: Full=50S ribosomal protein L3 gi|166233128|sp|A4JAP0|RL3_BURVG RecName: Full=50S ribosomal protein L3 gi|115280310|gb|ABI85827.1| LSU ribosomal protein L3P [Burkholderia ambifaria AMMD] gi|134137600|gb|ABO53343.1| LSU ribosomal protein L3P [Burkholderia vietnamiensis G4] Length = 217 Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 93/200 (46%), Positives = 125/200 (62%), Gaps = 1/200 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 2 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR+ L G+V F VGQ VDV G++IGKG Sbjct: 62 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGADLFEVGQKVDVQGVSIGKG 121 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RATHG S SH GS G QDPGRVF K+M G +G VTV+NLE+ Sbjct: 122 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTVTVQNLEI 181 Query: 180 VSVDDKRGLILVKGCVPGAK 199 +D +R L+LVKG +PGAK Sbjct: 182 ARIDAERKLLLVKGAIPGAK 201 >gi|237749515|ref|ZP_04579995.1| large subunit ribosomal protein L3 [Oxalobacter formigenes OXCC13] gi|229380877|gb|EEO30968.1| large subunit ribosomal protein L3 [Oxalobacter formigenes OXCC13] Length = 222 Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 94/216 (43%), Positives = 132/216 (61%), Gaps = 2/216 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GM ++ EG IPVTV+ + + +V +T + +GY AVQV G+ + Sbjct: 5 MSLGLIGRKVGMMRIFTDEGDSIPVTVVDVSDNRVTQVKTTETDGYTAVQVAFGKRRPSR 64 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V L EF V + + G V + F GQ +DV G++IGKG Sbjct: 65 VNKAAAGHFAKAGVEAGTVLREFTVDESKAAEVKAGDVLPATMFEAGQKIDVQGVSIGKG 124 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KRHNF RATHG S+SH GS G QDPGRVF KKM G MG T++NLE+ Sbjct: 125 YAGTIKRHNFASGRATHGNSLSHNVPGSIGMNQDPGRVFPGKKMTGHMGDVTKTIQNLEI 184 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +D +R L+LVKG VPGA KN+ ++VR + K+ V+ Sbjct: 185 ARIDAERNLLLVKGAVPGA-KNAEVIVRPAVKTKVS 219 >gi|126666813|ref|ZP_01737790.1| Ribosomal protein L3 [Marinobacter sp. ELB17] gi|126628858|gb|EAZ99478.1| Ribosomal protein L3 [Marinobacter sp. ELB17] Length = 212 Score = 174 bits (442), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 91/200 (45%), Positives = 130/200 (65%), Gaps = 3/200 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ +G+ +PVTV+ +D+ ++ +TL+ +GY AVQ+ G + Sbjct: 1 MAIGIVGRKAGMTRIFTEDGQALPVTVIEVDSNRITQLKTLENDGYRAVQITVGSRRSSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQ--KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 V+K G F+ V + ++EFR+ + +DL+ G + + S F GQ VD TG + GK Sbjct: 61 VNKSAAGHFAKAGVEAGRSVWEFRLADGEGEDLVAGGEI-TASVFEDGQAVDATGTSKGK 119 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG+MG +VTV+NL+ Sbjct: 120 GFQGGVKRWNFAMQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQMGNAQVTVQNLK 179 Query: 179 VVSVDDKRGLILVKGCVPGA 198 +V VD +R L+LV G VPGA Sbjct: 180 IVRVDAERNLLLVSGAVPGA 199 >gi|159901426|ref|YP_001547673.1| 50S ribosomal protein L3 [Herpetosiphon aurantiacus ATCC 23779] gi|226726278|sp|A9B412|RL3_HERA2 RecName: Full=50S ribosomal protein L3 gi|159894465|gb|ABX07545.1| ribosomal protein L3 [Herpetosiphon aurantiacus ATCC 23779] Length = 212 Score = 174 bits (442), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 101/216 (46%), Positives = 137/216 (63%), Gaps = 9/216 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M +G++ RK+GMT ++ +G IPVTV+ C V RT DK+GY AVQ+G GE K + Sbjct: 1 MLNGILGRKIGMTQIFTEKGETIPVTVIEAGPCVVTQLRTKDKDGYEAVQLGFGEIKPRK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEF-RVQKDDDLLP--VGSVFSPSYFTVGQLVDVTGMTIG 117 V+KP++G + +L F R K DL VG V + F +G+ +DV G + G Sbjct: 61 VTKPIQGHLKAAG-----RLVRFMREVKTTDLNAHNVGDVVNVDIFQIGEKIDVVGTSKG 115 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 +GF+G +KRH F G ATHG S HR+ GS G PGRV+KN +MAGRMG +RVTV+NL Sbjct: 116 RGFAGVVKRHGFRGGPATHGQSDRHRAPGSIGSGTTPGRVWKNMRMAGRMGNDRVTVQNL 175 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 EVV +D +R +ILVKG VPGA KN ++V + K+ Sbjct: 176 EVVKIDLERHVILVKGSVPGA-KNGLVMVSRAAKAT 210 >gi|237747365|ref|ZP_04577845.1| 50S ribosomal protein L3 [Oxalobacter formigenes HOxBLS] gi|229378716|gb|EEO28807.1| 50S ribosomal protein L3 [Oxalobacter formigenes HOxBLS] Length = 222 Score = 174 bits (442), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 96/216 (44%), Positives = 133/216 (61%), Gaps = 2/216 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GM ++ EG IPVTV+ + + +V +T + +GY AVQV G+ + Sbjct: 5 MSLGLIGRKVGMMRIFTDEGDSIPVTVVDVSDNRVTQVKTTETDGYAAVQVAFGKRRPSR 64 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G ++ V L EFRV + G V + F VGQ +DV G++IGKG Sbjct: 65 VNKAAAGHYAKAGVEAGTVLREFRVDATKAAEMKAGDVVPVTLFEVGQKIDVQGVSIGKG 124 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KRHNFG RATHG S+SH GS G QDPGRVF KKM G MG TV+NLE+ Sbjct: 125 YAGTIKRHNFGSGRATHGNSLSHNVPGSIGMNQDPGRVFPGKKMTGHMGDETRTVQNLEI 184 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +D +R L+LVKG VPGA KN+ ++V + K+ V+ Sbjct: 185 ARIDAERNLLLVKGAVPGA-KNAQVVVCPAVKTKVS 219 >gi|221632978|ref|YP_002522201.1| 50S ribosomal protein L3 [Thermomicrobium roseum DSM 5159] gi|254803699|sp|B9KZY7|RL3_THERP RecName: Full=50S ribosomal protein L3 gi|221155754|gb|ACM04881.1| ribosomal protein L3 [Thermomicrobium roseum DSM 5159] Length = 214 Score = 174 bits (442), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 103/212 (48%), Positives = 130/212 (61%), Gaps = 5/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RKLGMT +++ EGR IPVTVL + C V +T D++GY AVQ+G G K +N Sbjct: 1 MIEGLLGRKLGMTQIFDDEGRAIPVTVLEVGPCVVTQVKTSDRDGYQAVQLGFGHRKRQN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +PM+G + SP+ L E RV D VG V + F GQLVDV G G+GF Sbjct: 61 --RPMQGHLRASGASPRY-LKEVRVD-DATRFQVGQVIDCTIFQPGQLVDVIGWRKGRGF 116 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH F G THG S HR+ GS G DPGRV K K+MAGRMG RVTV+NL V Sbjct: 117 QGGVKRHGFAGGPKTHGQSDRHRAPGSIGPTTDPGRVHKGKRMAGRMGPVRVTVQNLRVE 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LV+G VPG N ++VR + K Sbjct: 177 RVDPQRNLVLVRGAVPG-HPNGLVIVRYAVKQ 207 >gi|172087649|ref|YP_203618.2| 50S ribosomal subunit protein L3 [Vibrio fischeri ES114] gi|197333952|ref|YP_002154996.1| 50S ribosomal protein L3 [Vibrio fischeri MJ11] gi|226730588|sp|B5FG09|RL3_VIBFM RecName: Full=50S ribosomal protein L3 gi|171902244|gb|AAW84730.2| 50S ribosomal subunit protein L3 [Vibrio fischeri ES114] gi|197315442|gb|ACH64889.1| 50S ribosomal protein L3 [Vibrio fischeri MJ11] Length = 209 Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 95/209 (45%), Positives = 134/209 (64%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT ++ EG IPVTV+ ++ +V +T++ +GY A+QV G K VSK Sbjct: 3 GLVGRKVGMTRIFTEEGVSIPVTVVEVEANRVSQVKTVETDGYNAIQVTCGSKKANRVSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF GA Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGAELTVEVFNEIKKVDVTGTSKGKGFQGA 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPG+ + ++V+ + K+ Sbjct: 182 AERNLLLIKGAVPGSTGGN-VIVKPAVKA 209 >gi|92112554|ref|YP_572482.1| 50S ribosomal protein L3P [Chromohalobacter salexigens DSM 3043] gi|123387627|sp|Q1R0H5|RL3_CHRSD RecName: Full=50S ribosomal protein L3 gi|91795644|gb|ABE57783.1| LSU ribosomal protein L3P [Chromohalobacter salexigens DSM 3043] Length = 212 Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 94/212 (44%), Positives = 136/212 (64%), Gaps = 1/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V +K GMT ++ G +PVTV+ ++ +V +T++ +GY AVQV +G K K+ Sbjct: 1 MTIGLVGKKSGMTRIFTENGASVPVTVIEVEPNRVTRVKTVESDGYSAVQVTSGSRKAKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++K G ++ V + L EFR+ + ++ VG + S F GQ VDVTG + GKGF Sbjct: 61 LTKAAAGQYAKSGVEAGRSLMEFRLAEGEEAPEVGGNITVSLFEAGQKVDVTGTSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR NF HG S++HR+ GS G Q PGRVFK KKMAG++G RVTV++LE+V Sbjct: 121 QGAVKRWNFRTQDNGHGNSLAHRAPGSIGQCQTPGRVFKGKKMAGQLGNERVTVQSLEIV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + ++VR + K+ Sbjct: 181 RVDAERNLLLVKGAVPGA-TDCEVIVRSAVKA 211 >gi|154274402|ref|XP_001538052.1| hypothetical protein HCAG_05657 [Ajellomyces capsulatus NAm1] gi|150414492|gb|EDN09854.1| hypothetical protein HCAG_05657 [Ajellomyces capsulatus NAm1] Length = 265 Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 87/195 (44%), Positives = 132/195 (67%), Gaps = 2/195 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GMT ++++E G+RIP T+L LD QV+ H+TL KNGY AVQ+G G + Sbjct: 71 LRTGTLAIKKGMTAIFDLETGKRIPCTILQLDRVQVISHKTLKKNGYYAVQIGCGWKHER 130 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V++PM G F++ V+PK+ + EFRV+ ++ LLP+G + + ++F GQ VD + G G Sbjct: 131 AVTRPMLGHFAANGVAPKRHIHEFRVKDENGLLPIGEMINANWFQEGQYVDARSNSRGMG 190 Query: 120 FSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKRH F G +HGVS++HR S + RV+ KKMAG MG +VT++NL+ Sbjct: 191 FAGVMKRHGFHGQDRSHGVSLTHRSMGSSGPGQGGGSRVYPGKKMAGNMGNKQVTLQNLK 250 Query: 179 VVSVDDKRGLILVKG 193 V+ VD ++G+++V G Sbjct: 251 VLKVDAEKGIVVVNG 265 >gi|311744809|ref|ZP_07718605.1| 50S ribosomal protein L3 [Aeromicrobium marinum DSM 15272] gi|311311926|gb|EFQ81847.1| 50S ribosomal protein L3 [Aeromicrobium marinum DSM 15272] Length = 222 Score = 174 bits (442), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 93/208 (44%), Positives = 130/208 (62%), Gaps = 2/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT V++ + R +PVTV+ D V RT + +GY AVQ+G GE + V+K Sbjct: 11 GLLGRKLGMTQVWDADNRVVPVTVIAADTNVVTQIRTRETDGYSAVQLGFGEIDGRKVNK 70 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ + E R + D +G SP F G +VDVTG + GKGF+G Sbjct: 71 PQSGHFDKAGVTPRRHVVEIRTEAIADYT-LGQEISPEIFAAGDVVDVTGTSKGKGFAGV 129 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G+ A+HG +HR GS G PGRVFK +MAG MG ++VT +NL V +VD Sbjct: 130 MKRHGFHGVGASHGAHRNHRKPGSIGGCATPGRVFKGLRMAGHMGTDQVTTQNLTVHAVD 189 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 ++G+IL+KG VPG K +++R + K Sbjct: 190 LEKGVILIKGAVPG-PKGQLVVIRSAAK 216 >gi|209693924|ref|YP_002261852.1| 50S ribosomal protein L3 [Aliivibrio salmonicida LFI1238] gi|226725124|sp|B6EPS5|RL3_ALISL RecName: Full=50S ribosomal protein L3 gi|208007875|emb|CAQ78005.1| 50S ribosomal protein L3 [Aliivibrio salmonicida LFI1238] Length = 209 Score = 174 bits (441), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 95/209 (45%), Positives = 133/209 (63%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT ++ EG IPVTV+ ++ +V +T++ +GY A+QV G K VSK Sbjct: 3 GLVGRKVGMTRIFTEEGVSIPVTVVEVEVNRVSQVKTVETDGYNAIQVTCGSKKANRVSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR++ ++ VG+ S F + VDVTG + GKGF GA Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLENGEEFT-VGAELSVEIFNEIKKVDVTGTSKGKGFQGA 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG R T +NLE+V VD Sbjct: 122 IKRWNFATQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERCTTQNLEIVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPG+ + ++V+ + K+ Sbjct: 182 AERNLLLIKGAVPGSTGGN-VIVKPAVKA 209 >gi|54307541|ref|YP_128561.1| 50S ribosomal protein L3 [Photobacterium profundum SS9] gi|81828878|sp|Q6LVB6|RL3_PHOPR RecName: Full=50S ribosomal protein L3 gi|46911961|emb|CAG18759.1| putative ribosomal protein L3 [Photobacterium profundum SS9] Length = 209 Score = 174 bits (441), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 90/195 (46%), Positives = 125/195 (64%), Gaps = 1/195 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT ++ EG IPVTV+ ++ +V ++L+ +GY A+Q+ G K VSK Sbjct: 3 GLIGRKVGMTRIFTEEGISIPVTVVEVEANRVTQVKSLETDGYNAIQITTGTKKANRVSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF G Sbjct: 63 PAAGHFAKAGVEAGRGLWEFRLENGEEF-AVGAELNVELFNEVKKVDVTGTSKGKGFQGV 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 IKRWNFSTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKRGLILVKGCVPGA 198 +R L+L+KG VPG+ Sbjct: 182 AERNLLLIKGAVPGS 196 >gi|262273379|ref|ZP_06051193.1| LSU ribosomal protein L3p (L3e) [Grimontia hollisae CIP 101886] gi|262222357|gb|EEY73668.1| LSU ribosomal protein L3p (L3e) [Grimontia hollisae CIP 101886] Length = 209 Score = 174 bits (441), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 96/209 (45%), Positives = 133/209 (63%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT ++ EG IPVTV+ ++ +V RT + +GY A+QV G K ++K Sbjct: 3 GLVGRKVGMTRIFTEEGVSIPVTVVEVETNRVTQVRTPEVDGYSAIQVTTGVKKASRITK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF GA Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELNVDLFADIKKVDVTGTSKGKGFQGA 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPGA S ++V+ + K+ Sbjct: 182 AERKLLLIKGAVPGA-TGSNVIVKPAVKA 209 >gi|160932201|ref|ZP_02079592.1| hypothetical protein CLOLEP_01036 [Clostridium leptum DSM 753] gi|156868803|gb|EDO62175.1| hypothetical protein CLOLEP_01036 [Clostridium leptum DSM 753] Length = 210 Score = 174 bits (441), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 130/212 (61%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +K+GMT +++ G+ +PVTV+ C V +T++ +GY AVQ+G G+ K Sbjct: 1 MQKGIIGKKIGMTQIFDENGKVVPVTVVEAGPCVVSQKKTVENDGYAAVQIGFGDLKAHK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V KPM G F+ NV+PK+ L EFR D D VG + F G VDVTG + GKG+ Sbjct: 61 VKKPMAGHFAKANVAPKRTLREFRFD-DIDAYNVGDLVKADVFAAGDKVDVTGTSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF L+ +HG R GS G DP RV+ KKMAG +G RVTV+NL+VV Sbjct: 120 AGVIKRWNFQRLKESHGSGPVARHGGSIGSCSDPSRVYPGKKMAGHLGSERVTVQNLQVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + LI +KG +PG + +++ D+ K+ Sbjct: 180 KVDAENNLIAIKGAIPGPNGGT-VVIHDTVKA 210 >gi|325678624|ref|ZP_08158234.1| 50S ribosomal protein L3 [Ruminococcus albus 8] gi|324109674|gb|EGC03880.1| 50S ribosomal protein L3 [Ruminococcus albus 8] Length = 212 Score = 174 bits (441), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 91/211 (43%), Positives = 133/211 (63%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +K+GMT +++ G+ +PVTV+ C VV +T++ +GY AVQ+G GE + K Sbjct: 1 MQKGIIGKKIGMTQIFDETGKVVPVTVVEAGPCVVVQKKTVENDGYEAVQLGYGEIRAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F +V+ K+ L EF++ D + VG + FT G +VDV+G + G GF Sbjct: 61 VNKPLQGHFKKADVAMKRTLKEFKLA-DAANMNVGDIVKAEVFTEGDVVDVSGTSKGHGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG +KRHN L+ THG HR GS G DP R++K KKM G+ G +VTV+NL VV Sbjct: 120 SGTIKRHNGHRLKETHGTGPVHRHAGSYGACSDPSRIYKGKKMPGQYGNVKVTVQNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + LI +KG +PG KN + + DS K Sbjct: 180 KVDAENNLIAIKGAIPGP-KNGTVTICDSVK 209 >gi|297159597|gb|ADI09309.1| 50S ribosomal protein L3 [Streptomyces bingchenggensis BCW-1] Length = 214 Score = 174 bits (441), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 97/210 (46%), Positives = 126/210 (60%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ KLGMT V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+K Sbjct: 7 GVLGEKLGMTQVWDENNRIVPVTVVKAGPCVVTQVRTADSDGYDAVQIAFGEIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ +V+P++ L E R D +G + F G VDVTG + GKG +G Sbjct: 67 PLKGHFAKADVTPRRHLVELRTA-DASEYALGQEVTAEVFESGVKVDVTGTSKGKGTAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +VD Sbjct: 126 MKRHGFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+KG VPG +LVR + K A Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214 >gi|257095040|ref|YP_003168681.1| 50S ribosomal protein L3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047564|gb|ACV36752.1| ribosomal protein L3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 214 Score = 174 bits (441), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 101/213 (47%), Positives = 132/213 (61%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G +PVTVL + N +V +T +GY VQV G+ + Sbjct: 1 MSLGLVGRKVGMTRIFTDDGISVPVTVLDVSNNRVAQIKTPQNDGYSVVQVAFGKRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQ-KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 VSKP+ G + V L EF V + L G S + F VGQ VDVTG TIGKG Sbjct: 61 VSKPLAGHLAKAGVEAGHVLKEFPVSVAELATLKPGDQISVTIFAVGQKVDVTGKTIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRH+F A HG S+SH++ GSTG QDPGRVF KKMAG +G + T +NLEV Sbjct: 121 FSGGIKRHHFSSQGAAHGNSVSHQALGSTGMAQDPGRVFPGKKMAGHLGAVKRTQQNLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD R L+L+KG VPG+ K S ++VR + K+ Sbjct: 181 VRVDVDRQLLLLKGAVPGS-KGSDVIVRPAVKA 212 >gi|83648852|ref|YP_437287.1| ribosomal protein L3 [Hahella chejuensis KCTC 2396] gi|109893432|sp|Q2S912|RL3_HAHCH RecName: Full=50S ribosomal protein L3 gi|83636895|gb|ABC32862.1| Ribosomal protein L3 [Hahella chejuensis KCTC 2396] Length = 212 Score = 174 bits (441), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 92/199 (46%), Positives = 127/199 (63%), Gaps = 1/199 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ +G +PVTV+ ++ + ++L+ +GY A+QV +G K Sbjct: 1 MAIGLVGRKAGMTRLFEDDGAAVPVTVIQVEKNVIAQVKSLEVDGYRAIQVTSGSVKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KPM G F+ V + + EF + D VG S + F GQ VDV+G + GKG Sbjct: 61 VNKPMAGHFAKAGVEAGRVVCEFTLDATDSAEYKVGDEVSVTIFEAGQKVDVSGRSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KR NF ATHG S+SHR+ GS G Q PGRVFK KKMAG+MG VTV+ L+V Sbjct: 121 FAGVIKRWNFSTQDATHGNSLSHRAPGSIGQNQSPGRVFKGKKMAGQMGNKNVTVQTLKV 180 Query: 180 VSVDDKRGLILVKGCVPGA 198 V VD+++GL+L+KG VPGA Sbjct: 181 VRVDEEKGLLLIKGAVPGA 199 >gi|307328030|ref|ZP_07607211.1| 50S ribosomal protein L3 [Streptomyces violaceusniger Tu 4113] gi|306886335|gb|EFN17340.1| 50S ribosomal protein L3 [Streptomyces violaceusniger Tu 4113] Length = 214 Score = 174 bits (441), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 97/210 (46%), Positives = 126/210 (60%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ KLGMT V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+K Sbjct: 7 GVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTDDADGYSAVQIAFGEIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ +V+P++ L E R D +G + F G VDVTG + GKG +G Sbjct: 67 PLKGHFAKADVTPRRHLVELRTT-DAGEYTLGQEVTAEVFESGVRVDVTGTSKGKGTAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +VD Sbjct: 126 MKRHGFAGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+KG VPG +LVR + K A Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214 >gi|156973051|ref|YP_001443958.1| 50S ribosomal protein L3 [Vibrio harveyi ATCC BAA-1116] gi|269959691|ref|ZP_06174071.1| 50S ribosomal protein L3 [Vibrio harveyi 1DA3] gi|166234607|sp|A7MWI3|RL3_VIBHB RecName: Full=50S ribosomal protein L3 gi|156524645|gb|ABU69731.1| hypothetical protein VIBHAR_00730 [Vibrio harveyi ATCC BAA-1116] gi|269835614|gb|EEZ89693.1| 50S ribosomal protein L3 [Vibrio harveyi 1DA3] Length = 209 Score = 174 bits (441), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 94/209 (44%), Positives = 134/209 (64%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV AG K V+K Sbjct: 3 GLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF GA Sbjct: 63 AEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGAELTVELFNETKKVDVTGTSKGKGFQGA 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPG+ + ++V+ + K+ Sbjct: 182 AERNLLLIKGAVPGSTGGN-VIVKPAVKA 209 >gi|269104012|ref|ZP_06156709.1| LSU ribosomal protein L3p (L3e) [Photobacterium damselae subsp. damselae CIP 102761] gi|268163910|gb|EEZ42406.1| LSU ribosomal protein L3p (L3e) [Photobacterium damselae subsp. damselae CIP 102761] Length = 209 Score = 174 bits (441), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 92/209 (44%), Positives = 134/209 (64%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT ++ G IPVTV+ ++ +V +T++ +GY A+Q+ G K V+K Sbjct: 3 GLIGRKVGMTRIFTEAGVSIPVTVVEVEANRVSQVKTVETDGYNAIQITTGSKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR++ +++ VG+ + F + VDVTG + GKGF GA Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLENNEEF-AVGAELTVELFNEVKKVDVTGTSKGKGFQGA 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPGA + ++V+ + K+ Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|39997949|ref|NP_953900.1| 50S ribosomal protein L3 [Geobacter sulfurreducens PCA] gi|42559575|sp|P60454|RL3_GEOSL RecName: Full=50S ribosomal protein L3 gi|39984894|gb|AAR36250.1| ribosomal protein L3 [Geobacter sulfurreducens PCA] gi|298506888|gb|ADI85611.1| ribosomal protein L3 [Geobacter sulfurreducens KN400] Length = 210 Score = 174 bits (441), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 96/211 (45%), Positives = 133/211 (63%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++A+KLGMT ++ +G+RIPVTV+ C V+ +T +GY A+QVG + + Sbjct: 1 MKKGLIAKKLGMTQIFAEDGKRIPVTVVQAGPCVVLQKKTSATDGYDAIQVGFLSQEARK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM G + + EFR+ D D VG V S F VG+ +DVTG +IGKGF Sbjct: 61 VTKPMLGHIKAAGQGAFAHIREFRLD-DVDRYNVGDVISADAFEVGEYIDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR F G R++HG S HR+ GS G P RVFKNKKM G++G RVTV+ L+VV Sbjct: 120 QGVIKRWGFRGGRSSHG-SCFHRAPGSIGSSAYPSRVFKNKKMPGQLGNERVTVQRLQVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD ++L+KG +PGA KN +LV+D+ K Sbjct: 179 RVDAADNILLIKGAIPGA-KNGIVLVKDTVK 208 >gi|290477192|ref|YP_003470107.1| 50S ribosomal subunit protein L3 [Xenorhabdus bovienii SS-2004] gi|289176540|emb|CBJ83349.1| 50S ribosomal subunit protein L3 [Xenorhabdus bovienii SS-2004] Length = 210 Score = 174 bits (441), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 92/202 (45%), Positives = 127/202 (62%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPV+V+ ++ ++ + + +GY A+QV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVSVIEIEENRITQVKDQESDGYRAIQVTTGSKKANRVNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L EFR+ DD+ VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRTLREFRLSLDDEEYTVGQSISVEIFANVKKVDVTGTSKGKGFAGT 122 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV VD Sbjct: 123 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVD 182 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 183 AERNLLLVKGAVPGATGSDLIV 204 >gi|71905961|ref|YP_283548.1| 50S ribosomal protein L3 [Dechloromonas aromatica RCB] gi|109893424|sp|Q47JA3|RL3_DECAR RecName: Full=50S ribosomal protein L3 gi|71845582|gb|AAZ45078.1| LSU ribosomal protein L3P [Dechloromonas aromatica RCB] Length = 212 Score = 174 bits (441), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 132/213 (61%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTVL + N +V +T + +GY A+QV G+ + Sbjct: 1 MSLGLVGRKVGMTRIFAEDGASIPVTVLDVSNNRVTQVKTPEIDGYAAIQVAFGKRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 VSKP+ G + V L EF+++ D G + + F GQ VDVTG +IGKG Sbjct: 61 VSKPLAGHLAKAGVEAGHVLKEFQIEADQLASFKAGDQVAVTIFAEGQKVDVTGTSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KRHNF RA+HG S+SH + GS G QDPGRVF K+MAG +G + T++ L + Sbjct: 121 FQGGIKRHNFSSNRASHGNSLSHNAPGSIGMAQDPGRVFPGKRMAGHLGDVQSTMQGLTI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD R L+LVKG VPGA K S ++VR + K+ Sbjct: 181 VRVDADRQLLLVKGAVPGA-KGSDVVVRPAVKA 212 >gi|269219006|ref|ZP_06162860.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 848 str. F0332] gi|269212117|gb|EEZ78457.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 848 str. F0332] Length = 221 Score = 174 bits (440), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 93/209 (44%), Positives = 130/209 (62%), Gaps = 2/209 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ KLGMT +++ GR +P+TV+ + V RT + +GY AVQ+ +GE K KNV+KP Sbjct: 15 LLGTKLGMTQLWDEAGRVVPITVVRVGTNVVTQIRTPETDGYSAVQLASGELKTKNVTKP 74 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 ++G F V+P++KL E R D +G + F GQ VDV G + GKGF+G M Sbjct: 75 LQGHFDKAGVAPRRKLAEIRTS-DAAEYELGQELTADLFEAGQKVDVIGTSKGKGFAGVM 133 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH F G+ A+HG +HR GS G P RVF+ +MAGRMG +RVTV NL V +VD Sbjct: 134 KRHGFSGVSASHGAHRNHRKPGSIGACATPSRVFRGLRMAGRMGKDRVTVLNLPVHAVDV 193 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++G+IL+ G VPG K ++VR + K A Sbjct: 194 EKGIILLAGAVPG-NKGGTVVVRTAVKGA 221 >gi|87122971|ref|ZP_01078832.1| 50S ribosomal subunit protein L3 [Marinomonas sp. MED121] gi|86161739|gb|EAQ63043.1| 50S ribosomal subunit protein L3 [Marinomonas sp. MED121] Length = 212 Score = 174 bits (440), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 94/201 (46%), Positives = 125/201 (62%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 +V RK GMT ++N +G +PVTV+ ++ +V +T D +GY AVQV G + V+K Sbjct: 5 LVGRKAGMTRIFNEDGVSVPVTVIEVEPNRVTQVKTADTDGYTAVQVTVGSRRASRVNKA 64 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G F+ V + L+EFR+ D+ + VG + + F VDV G + GKGF GA+ Sbjct: 65 AAGHFAKAKVEAGRGLWEFRLSGDEKEINVGDELTVADFESIATVDVIGQSKGKGFQGAI 124 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHNF ATHG S+SHR+ GS G Q PGRV+K KKMAG MG +VT ++LEVV VD Sbjct: 125 KRHNFSMQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGHMGAAQVTTQSLEVVRVDL 184 Query: 185 KRGLILVKGCVPGAKKNSWIL 205 +R LI+VKG VPGA IL Sbjct: 185 ERNLIIVKGAVPGATNGDVIL 205 >gi|317494342|ref|ZP_07952756.1| 50S ribosomal protein L3 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917592|gb|EFV38937.1| 50S ribosomal protein L3 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 209 Score = 174 bits (440), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 96/202 (47%), Positives = 128/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V +TLD +GY AVQV G K VSK Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKTLDNDGYCAVQVTTGAKKANRVSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRTLREFRLNEGEEFT-VGQSISVEIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA I+ Sbjct: 182 AERNLLLVKGAVPGATGGDLIV 203 >gi|190572944|ref|YP_001970789.1| 50S ribosomal protein L3 [Stenotrophomonas maltophilia K279a] gi|194364534|ref|YP_002027144.1| 50S ribosomal protein L3 [Stenotrophomonas maltophilia R551-3] gi|254522293|ref|ZP_05134348.1| ribosomal protein L3 [Stenotrophomonas sp. SKA14] gi|226730572|sp|B4SKW3|RL3_STRM5 RecName: Full=50S ribosomal protein L3 gi|226730573|sp|B2FQ45|RL3_STRMK RecName: Full=50S ribosomal protein L3 gi|190010866|emb|CAQ44475.1| putative 50S ribosomal protein L3 [Stenotrophomonas maltophilia K279a] gi|194347338|gb|ACF50461.1| ribosomal protein L3 [Stenotrophomonas maltophilia R551-3] gi|219719884|gb|EED38409.1| ribosomal protein L3 [Stenotrophomonas sp. SKA14] Length = 216 Score = 174 bits (440), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 99/211 (46%), Positives = 131/211 (62%), Gaps = 4/211 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G V RK GM+ V+ +GR IPVT++ ++ +T++ +GY AVQV G + V+K Sbjct: 8 GFVGRKAGMSRVFTEDGRSIPVTLIEATPNRIAQIKTVETDGYSAVQVTVGARRAALVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 P G F+ V + L+EFRV+ D L VG F VGQ+VDV G+T GKGF Sbjct: 68 PEAGHFAKAKVEAGRGLWEFRVE-DAQLGDFAVGGEVKADIFEVGQIVDVQGVTKGKGFQ 126 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + + +NLEVV Sbjct: 127 GTIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVK 186 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +RGLI V+G VPGA ++VR + K+ Sbjct: 187 VDVERGLIAVRGAVPGAAGGD-VIVRPASKA 216 >gi|108757306|ref|YP_631567.1| 50S ribosomal protein L3 [Myxococcus xanthus DK 1622] gi|123374502|sp|Q1D706|RL3_MYXXD RecName: Full=50S ribosomal protein L3 gi|108461186|gb|ABF86371.1| ribosomal protein L3 [Myxococcus xanthus DK 1622] Length = 224 Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 97/220 (44%), Positives = 135/220 (61%), Gaps = 3/220 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V+N EG +PVTV+ + CQVV RT +K+ Y AV +G GE + K ++ Sbjct: 3 GLIGKKIGMTQVFNDEGNLVPVTVIDVGTCQVVGKRTPEKDNYSAVTIGFGEIREKILNL 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 RGFF N ++ L EFRV ++ VG F G+LVDVTG+T G+GFSG Sbjct: 63 AERGFFKKANAPYRRHLKEFRVTPEEAASFNVGDAVKADMFAKGELVDVTGITKGRGFSG 122 Query: 123 AMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 M+R NF G + THG R G+ G R+ PGRV+ NKKM G G ++VT +NL VV Sbjct: 123 VMRRWNFKGSQTKTHGTHEYQRHPGAIGQRKTPGRVYPNKKMPGHYGVDQVTTQNLTVVD 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 VD ++GL+LVKG V G N + +R S K+A+ + K + Sbjct: 183 VDVEKGLVLVKGAVAG-HNNGVVYIRPSIKAAMRAQHKAA 221 >gi|302553542|ref|ZP_07305884.1| 50S ribosomal protein L3 [Streptomyces viridochromogenes DSM 40736] gi|302471160|gb|EFL34253.1| 50S ribosomal protein L3 [Streptomyces viridochromogenes DSM 40736] Length = 214 Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 97/210 (46%), Positives = 127/210 (60%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ GE + V+K Sbjct: 7 GILGEKLGMTQVWDANNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G FS +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 67 PLKGHFSKADVTPRRHLVEIRTA-DASEYTLGQEITAEVFEAGVKVDVTGKSKGKGFAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +VD Sbjct: 126 MKRHNFRGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+KG VPG +LVR + K A Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214 >gi|186477588|ref|YP_001859058.1| 50S ribosomal protein L3 [Burkholderia phymatum STM815] gi|226725142|sp|B2JIG6|RL3_BURP8 RecName: Full=50S ribosomal protein L3 gi|184194047|gb|ACC72012.1| ribosomal protein L3 [Burkholderia phymatum STM815] Length = 219 Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 93/200 (46%), Positives = 123/200 (61%), Gaps = 1/200 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGTRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EF++ L G+V F VGQ VDV G +IGKG Sbjct: 61 VTKPLAGHLAKAGVQAGEILKEFQIDAAKAAELSSGAVIGVDLFEVGQKVDVQGTSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAK 199 +D R L+LVKG VPGAK Sbjct: 181 ARIDADRKLLLVKGAVPGAK 200 >gi|323173956|gb|EFZ59584.1| ribosomal protein L3 family protein [Escherichia coli LT-68] Length = 209 Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 94/202 (46%), Positives = 129/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ + ++ PVG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLAEGEEF-PVGQSISVELFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|85713373|ref|ZP_01044382.1| Ribosomal protein L3 [Idiomarina baltica OS145] gi|85692801|gb|EAQ30790.1| Ribosomal protein L3 [Idiomarina baltica OS145] Length = 212 Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 93/199 (46%), Positives = 129/199 (64%), Gaps = 1/199 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V+ +G +PVTV+ + +V +T + +GY A+QV GE K Sbjct: 1 MAIGLVGRKVGMTRVFQEDGASVPVTVIEVLANRVTQVKTEETDGYRALQVTTGEKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP G F+ + + L+EFR++ + D VGS + F+ + VDVTG + GKG Sbjct: 61 VNKPSAGHFAKASSEAGRGLWEFRLEDGEGDDFAVGSEITVEVFSEIKKVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG+MG RVT ++LE+ Sbjct: 121 FAGTVKRWNFRTQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNERVTTQSLEL 180 Query: 180 VSVDDKRGLILVKGCVPGA 198 V VD +R L+L+KG VPGA Sbjct: 181 VRVDAERNLLLIKGAVPGA 199 >gi|260914680|ref|ZP_05921146.1| 50S ribosomal protein L3 [Pasteurella dagmatis ATCC 43325] gi|260631279|gb|EEX49464.1| 50S ribosomal protein L3 [Pasteurella dagmatis ATCC 43325] Length = 209 Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 96/209 (45%), Positives = 133/209 (63%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT ++N +G IPVTV+ ++ +V +T++ +GY A+QV G K V+K Sbjct: 3 GLVGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTVETDGYSAIQVTTGSKKASRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V + L+EFR + ++ +G + F + VDVTG + GKGF+G Sbjct: 63 PEAGHFVKAGVEAGRGLWEFRTTEGEEF-TLGQEINVDIFADVKKVDVTGTSKGKGFAGG 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+LVKG VPGA N ++V+ + K+ Sbjct: 182 AERKLLLVKGAVPGA-TNGDVIVKPAVKA 209 >gi|56461024|ref|YP_156305.1| ribosomal protein L3 [Idiomarina loihiensis L2TR] gi|81821713|sp|Q5QXZ0|RL3_IDILO RecName: Full=50S ribosomal protein L3 gi|56180034|gb|AAV82756.1| Ribosomal protein L3 [Idiomarina loihiensis L2TR] Length = 212 Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 95/213 (44%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V+ +G +PVTV+ + +V ++ D +GY A+QV GE K Sbjct: 1 MAIGLVGRKVGMTRVFQEDGASVPVTVIEVLANRVTQVKSDDTDGYRALQVTTGEKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G F+ + L+EFR+Q + + VGS + F VDVTG + GKG Sbjct: 61 VTKPLAGHFAKAGTEAGRGLWEFRLQNGEGEDYAVGSELTVDIFAEVNKVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG+MG +VT ++LE+ Sbjct: 121 FAGTVKRWNFSMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNEQVTTQSLEL 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+L+KG VPGA S ++V+ + K+ Sbjct: 181 VRVDAERSLLLIKGAVPGA-TGSDVIVKPAVKA 212 >gi|330447037|ref|ZP_08310687.1| 50S ribosomal subunit protein L3 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491228|dbj|GAA05184.1| 50S ribosomal subunit protein L3 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 209 Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 93/209 (44%), Positives = 134/209 (64%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT ++ +G IPVTV+ ++ +V ++++ +GY A+QV G K VSK Sbjct: 3 GLIGRKVGMTRIFTEDGVSIPVTVVEVEANRVTQVKSVETDGYNAIQVTTGSKKANRVSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF GA Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLENSEEF-AVGAELNVELFNDIKKVDVTGTSKGKGFQGA 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPGA + ++V+ + K+ Sbjct: 182 AERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|289523369|ref|ZP_06440223.1| 50S ribosomal protein L3 [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503061|gb|EFD24225.1| 50S ribosomal protein L3 [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 209 Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 93/208 (44%), Positives = 131/208 (62%), Gaps = 6/208 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT +++ EG+ +PVTV+ C+VV R + Y A+ +G G+ K Sbjct: 1 MSLGILGVKVGMTQIFDEEGQAVPVTVVEAGPCKVVALRRPEVEMYSAIVLGFGKVKAHR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118 ++KPM G + + PK+ L EFR+ DD+ VG + F VG++VDVTG + GK Sbjct: 61 LNKPMLGVYKKAGIEPKRWLREFRL---DDVTGYEVGQTIDVTIFEVGEVVDVTGTSKGK 117 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF+G MKRH FGG A+HG S+ HR GS+G P VFK K M GRMG RVTVKNL+ Sbjct: 118 GFAGVMKRHGFGGGPASHGASLFHRRAGSSGASSFPSHVFKGKTMPGRMGNERVTVKNLK 177 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILV 206 VV+VD + L+L+KG +PG +N ++V Sbjct: 178 VVAVDKENNLLLIKGAIPGP-RNGLVMV 204 >gi|29831469|ref|NP_826103.1| 50S ribosomal protein L3 [Streptomyces avermitilis MA-4680] gi|42559612|sp|Q82DP5|RL3_STRAW RecName: Full=50S ribosomal protein L3 gi|29608584|dbj|BAC72638.1| putative ribosomal protein L3 [Streptomyces avermitilis MA-4680] Length = 214 Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 96/210 (45%), Positives = 127/210 (60%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ GE + V+K Sbjct: 7 GILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDSDGYESVQIAFGEIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 67 PLKGHFAKADVTPRRHLVEIRTA-DASEYTLGQEITAETFEAGVKVDVTGKSKGKGFAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +VD Sbjct: 126 MKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+KG VPG +LVR + K A Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214 >gi|271502246|ref|YP_003335272.1| 50S ribosomal protein L3 [Dickeya dadantii Ech586] gi|270345801|gb|ACZ78566.1| 50S ribosomal protein L3 [Dickeya dadantii Ech586] Length = 209 Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 96/202 (47%), Positives = 128/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ EG IPVTV+ ++ +V +TL+ +GY AVQV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEEGVSIPVTVIEIEANRVTQVKTLENDGYRAVQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L EFR+ D + VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRVLREFRLA-DSEEFAVGQDISVEVFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|261866795|ref|YP_003254717.1| 50S ribosomal protein L3 [Aggregatibacter actinomycetemcomitans D11S-1] gi|315633455|ref|ZP_07888745.1| 50S ribosomal protein L3 [Aggregatibacter segnis ATCC 33393] gi|261412127|gb|ACX81498.1| ribosomal protein L3 [Aggregatibacter actinomycetemcomitans D11S-1] gi|315477497|gb|EFU68239.1| 50S ribosomal protein L3 [Aggregatibacter segnis ATCC 33393] Length = 208 Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 97/209 (46%), Positives = 132/209 (63%), Gaps = 3/209 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT ++N +G +PVTV+ ++ +V +TL+ +GY AVQV G K V+K Sbjct: 3 GLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKASRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V + L+EFR + ++ +G + F + VDVTG + GKGF G Sbjct: 63 PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQGG 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV VD Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGNERVTVQSLEVVRVD 180 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 AERKLLLVKGAVPGA-TGSDVIVKPAVKA 208 >gi|171060669|ref|YP_001793018.1| 50S ribosomal protein L3 [Leptothrix cholodnii SP-6] gi|212288405|sp|B1Y8I7|RL3_LEPCP RecName: Full=50S ribosomal protein L3 gi|170778114|gb|ACB36253.1| ribosomal protein L3 [Leptothrix cholodnii SP-6] Length = 226 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 98/212 (46%), Positives = 131/212 (61%), Gaps = 4/212 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ RK+GM ++ +G +PVTVL + N +V +T++ +GY AVQV G K V Sbjct: 9 RLGLLGRKVGMMRIFTDDGDAVPVTVLDVSNNRVAQIKTVETDGYSAVQVAFGARKASRV 68 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKD--DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP G + V + L EFRV + + P GS + F GQ VDV G TIGKG Sbjct: 69 TKPEAGHLAKAGVESGELLQEFRVSAEVAAECKP-GSQLPIAMFQAGQQVDVQGTTIGKG 127 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRH+FG RA+HG S SH GS QDPGRVF KKM+G +G + VT +NL+V Sbjct: 128 FAGTIKRHHFGSQRASHGNSRSHNVPGSISMAQDPGRVFPGKKMSGHLGDDTVTTQNLDV 187 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD+ R L+LVKG VPGA K ++ VR + K Sbjct: 188 VRVDEARQLLLVKGAVPGA-KGGFVTVRPAVK 218 >gi|300718705|ref|YP_003743508.1| 50S ribosomal protein L3 [Erwinia billingiae Eb661] gi|299064541|emb|CAX61661.1| 50S ribosomal protein L3 [Erwinia billingiae Eb661] Length = 209 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 93/195 (47%), Positives = 128/195 (65%), Gaps = 1/195 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V ++L+ +GY A+QV AG K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYTAIQVTAGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR + D+ VG + F+ + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRTVEGDEF-AVGQSINVDIFSDVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGA 198 +R L+LVKG VPGA Sbjct: 182 AERNLLLVKGAVPGA 196 >gi|297201729|ref|ZP_06919126.1| 50S ribosomal protein L3 [Streptomyces sviceus ATCC 29083] gi|197710896|gb|EDY54930.1| 50S ribosomal protein L3 [Streptomyces sviceus ATCC 29083] Length = 214 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 96/210 (45%), Positives = 127/210 (60%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ GE + V+K Sbjct: 7 GILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDADGYESVQIAFGEIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 67 PLKGHFAKADVTPRRHLVEIRTA-DASEYTLGQEITAEVFEAGIKVDVTGKSKGKGFAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +VD Sbjct: 126 MKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+KG VPG +LVR + K A Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214 >gi|194099923|ref|YP_002003061.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae NCCP11945] gi|193935213|gb|ACF31037.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae NCCP11945] gi|317165376|gb|ADV08917.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae TCDC-NG08107] Length = 203 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 98/201 (48%), Positives = 126/201 (62%), Gaps = 2/201 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K V+K G F+ Sbjct: 1 MTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANRVNKAEAGHFAK 60 Query: 72 VNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130 V + L EF + ++ L G + S F VGQLVDVTG + GKGFSG +KRHNFG Sbjct: 61 AGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKGFSGTIKRHNFG 120 Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190 R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEVV VD +R L+L Sbjct: 121 AQRTSHGNSRSHRVPGSIGVAQDPGRVFPGKRMAGQYGNTKATVQKLEVVRVDAERQLLL 180 Query: 191 VKGCVPGAKKNSWILVRDSFK 211 VKG VPGA NS ++VR S K Sbjct: 181 VKGAVPGA-VNSDVVVRPSVK 200 >gi|290958151|ref|YP_003489333.1| 50S ribosomal protein L3 [Streptomyces scabiei 87.22] gi|260647677|emb|CBG70782.1| 50S ribosomal protein L3 [Streptomyces scabiei 87.22] Length = 214 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 97/210 (46%), Positives = 127/210 (60%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ GE + V+K Sbjct: 7 GILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ +V+P++ L E R D +G S F G VDVTG + GKGF+G Sbjct: 67 PLKGHFAKADVTPRRHLVEIRTA-DASEYTLGQEISAEVFEAGVKVDVTGKSKGKGFAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +VD Sbjct: 126 MKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+KG VPG +LVR + K A Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214 >gi|163840906|ref|YP_001625311.1| 50S ribosomal protein L3 [Renibacterium salmoninarum ATCC 33209] gi|189029475|sp|A9WSV9|RL3_RENSM RecName: Full=50S ribosomal protein L3 gi|162954382|gb|ABY23897.1| LSU ribosomal protein L3P [Renibacterium salmoninarum ATCC 33209] Length = 220 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 92/211 (43%), Positives = 127/211 (60%), Gaps = 2/211 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ + +PVTV+ D+ V R K+GY AVQ+G G+ + V+K Sbjct: 9 GILGTKLGMTQVWDENNKLVPVTVVQADSNVVTQLRDAAKDGYTAVQIGYGQIDPRKVTK 68 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+P++ + E R D D +G S F GQ VDV G + GKGF+G Sbjct: 69 PLAGHFEKAGVTPRRHVVELRTN-DSDAYSLGQELSVEIFEAGQKVDVVGTSKGKGFAGV 127 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G+ A+HG +HR GS G P RVFK KMAGRMGG R T NL V ++D Sbjct: 128 MKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGLKMAGRMGGERHTTLNLTVHAID 187 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 ++ L+L+KG +PGA + +LVR + K+ V Sbjct: 188 AEKSLLLIKGAIPGA-RGRVVLVRTAVKTTV 217 >gi|254362074|ref|ZP_04978199.1| ribosomal protein L3 [Mannheimia haemolytica PHL213] gi|261493009|ref|ZP_05989551.1| ribosomal protein L3 [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495171|ref|ZP_05991634.1| ribosomal protein L3 [Mannheimia haemolytica serotype A2 str. OVINE] gi|153093630|gb|EDN74595.1| ribosomal protein L3 [Mannheimia haemolytica PHL213] gi|261309147|gb|EEY10387.1| ribosomal protein L3 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311353|gb|EEY12514.1| ribosomal protein L3 [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 209 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 97/209 (46%), Positives = 132/209 (63%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV G K V+K Sbjct: 3 GLIGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDGYSAIQVTTGSKKASRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V + L+EFR + ++ +G + FT + VDVTG + GKGF G Sbjct: 63 PEAGHFVKAGVEAGRGLWEFRTTEGEEF-TLGQEINVDIFTDVKKVDVTGTSKGKGFQGG 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+LVKG VPGA N ++V+ + K+ Sbjct: 182 VERKLLLVKGAVPGA-TNGDVIVKPAVKA 209 >gi|148827966|ref|YP_001292719.1| 50S ribosomal protein L3 [Haemophilus influenzae PittGG] gi|166233148|sp|A5UHT0|RL3_HAEIG RecName: Full=50S ribosomal protein L3 gi|148719208|gb|ABR00336.1| 50S ribosomal protein L3 [Haemophilus influenzae PittGG] Length = 208 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 97/209 (46%), Positives = 132/209 (63%), Gaps = 3/209 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT ++N +G +PVTV+ ++ +V +TL+ +GY AVQV G K V+K Sbjct: 3 GLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V + L+EFR + ++ +G + F + VDVTG + GKGF G Sbjct: 63 PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQGG 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV VD Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 180 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+LVKG VPGA N ++V+ + K+ Sbjct: 181 AERKLLLVKGSVPGA-INGNVIVKPAVKA 208 >gi|16272718|ref|NP_438936.1| 50S ribosomal protein L3 [Haemophilus influenzae Rd KW20] gi|68249373|ref|YP_248485.1| 50S ribosomal protein L3 [Haemophilus influenzae 86-028NP] gi|145630522|ref|ZP_01786302.1| acetyl-CoA:acetoacetyl-CoA transferase subunit alpha [Haemophilus influenzae R3021] gi|145632130|ref|ZP_01787865.1| acetyl-CoA:acetoacetyl-CoA transferase subunit alpha [Haemophilus influenzae 3655] gi|145634812|ref|ZP_01790520.1| 50S ribosomal protein L3 [Haemophilus influenzae PittAA] gi|145636667|ref|ZP_01792334.1| 50S ribosomal protein L3 [Haemophilus influenzae PittHH] gi|145638423|ref|ZP_01794033.1| 50S ribosomal protein L3 [Haemophilus influenzae PittII] gi|229844644|ref|ZP_04464783.1| 50S ribosomal protein L3 [Haemophilus influenzae 6P18H1] gi|229845827|ref|ZP_04465939.1| 50S ribosomal protein L3 [Haemophilus influenzae 7P49H1] gi|260579868|ref|ZP_05847698.1| 50S ribosomal protein L3 [Haemophilus influenzae RdAW] gi|260581595|ref|ZP_05849392.1| 50S ribosomal protein L3 [Haemophilus influenzae NT127] gi|319775289|ref|YP_004137777.1| 50S ribosomal subunit protein L3 [Haemophilus influenzae F3047] gi|319897729|ref|YP_004135926.1| 50S ribosomal subunit protein l3 [Haemophilus influenzae F3031] gi|325577127|ref|ZP_08147611.1| 50S ribosomal protein L3 [Haemophilus parainfluenzae ATCC 33392] gi|1173047|sp|P44344|RL3_HAEIN RecName: Full=50S ribosomal protein L3 gi|81336200|sp|Q4QMC2|RL3_HAEI8 RecName: Full=50S ribosomal protein L3 gi|1573787|gb|AAC22436.1| ribosomal protein L3 (rpL3) [Haemophilus influenzae Rd KW20] gi|68057572|gb|AAX87825.1| 50S ribosomal protein L3 [Haemophilus influenzae 86-028NP] gi|144983912|gb|EDJ91354.1| acetyl-CoA:acetoacetyl-CoA transferase subunit alpha [Haemophilus influenzae R3021] gi|144987037|gb|EDJ93567.1| acetyl-CoA:acetoacetyl-CoA transferase subunit alpha [Haemophilus influenzae 3655] gi|145267978|gb|EDK07974.1| 50S ribosomal protein L3 [Haemophilus influenzae PittAA] gi|145270193|gb|EDK10129.1| 50S ribosomal protein L3 [Haemophilus influenzae PittHH] gi|145272752|gb|EDK12659.1| 50S ribosomal protein L3 [Haemophilus influenzae PittII] gi|229810831|gb|EEP46548.1| 50S ribosomal protein L3 [Haemophilus influenzae 7P49H1] gi|229812358|gb|EEP48048.1| 50S ribosomal protein L3 [Haemophilus influenzae 6P18H1] gi|260093152|gb|EEW77085.1| 50S ribosomal protein L3 [Haemophilus influenzae RdAW] gi|260095188|gb|EEW79079.1| 50S ribosomal protein L3 [Haemophilus influenzae NT127] gi|301155330|emb|CBW14796.1| 50S ribosomal subunit protein L3 [Haemophilus parainfluenzae T3T1] gi|301169494|emb|CBW29095.1| 50S ribosomal subunit protein L3 [Haemophilus influenzae 10810] gi|309751562|gb|ADO81546.1| 50S ribosomal protein L3 [Haemophilus influenzae R2866] gi|309973732|gb|ADO96933.1| 50S ribosomal protein L3 [Haemophilus influenzae R2846] gi|317433235|emb|CBY81610.1| 50S ribosomal subunit protein L3 [Haemophilus influenzae F3031] gi|317449880|emb|CBY86091.1| 50S ribosomal subunit protein L3 [Haemophilus influenzae F3047] gi|325160709|gb|EGC72830.1| 50S ribosomal protein L3 [Haemophilus parainfluenzae ATCC 33392] Length = 208 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 97/209 (46%), Positives = 132/209 (63%), Gaps = 3/209 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT ++N +G +PVTV+ ++ +V +TL+ +GY AVQV G K V+K Sbjct: 3 GLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V + L+EFR + ++ +G + F + VDVTG + GKGF G Sbjct: 63 PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQGG 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV VD Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 180 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+LVKG VPGA N ++V+ + K+ Sbjct: 181 AERKLLLVKGSVPGA-INGDVIVKPAVKA 208 >gi|302877801|ref|YP_003846365.1| 50S ribosomal protein L3 [Gallionella capsiferriformans ES-2] gi|302580590|gb|ADL54601.1| 50S ribosomal protein L3 [Gallionella capsiferriformans ES-2] Length = 214 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 100/213 (46%), Positives = 131/213 (61%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V+ +G +PVTVL + N +V +++ +GY AVQV G + Sbjct: 1 MSLGLVGRKIGMTRVFTEDGSSLPVTVLEVSNNRVTQVKSVAVDGYTAVQVAHGVRRATR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 VSK G ++ V L EF V + D L +GS S F VGQLVDVTG T GKG Sbjct: 61 VSKAAAGHYAKAGVEAGSALKEFIVTPEQLDGLALGSSISVEIFQVGQLVDVTGTTKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KRH+F RA+HG S SH GS G QDPGRVF K+M G +G + TV+NL++ Sbjct: 121 YAGTIKRHHFKSGRASHGNSKSHNVPGSIGMAQDPGRVFPGKRMTGHLGDEQRTVQNLQI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD R L+LVKG VPG NS I+VR + K+ Sbjct: 181 VRVDVARQLLLVKGAVPGC-TNSKIIVRPAVKA 212 >gi|197287068|ref|YP_002152940.1| 50S ribosomal protein L3 [Proteus mirabilis HI4320] gi|227354934|ref|ZP_03839348.1| 50S ribosomal protein L3 [Proteus mirabilis ATCC 29906] gi|226730550|sp|B4F1I4|RL3_PROMH RecName: Full=50S ribosomal protein L3 gi|194684555|emb|CAR46379.1| 50S ribosomal protein L3 [Proteus mirabilis HI4320] gi|227165016|gb|EEI49855.1| 50S ribosomal protein L3 [Proteus mirabilis ATCC 29906] Length = 209 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 95/202 (47%), Positives = 129/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++N +V + L+K+GY A+QV G K V K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKDLEKDGYRAIQVTTGSKKANRVLK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRLLREFRLNEGEEYT-VGQSISVEIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG++G +VTV++LEVV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGQLGNEQVTVQSLEVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|296268550|ref|YP_003651182.1| 50S ribosomal protein L3 [Thermobispora bispora DSM 43833] gi|296091337|gb|ADG87289.1| ribosomal protein L3 [Thermobispora bispora DSM 43833] Length = 218 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 94/214 (43%), Positives = 128/214 (59%), Gaps = 2/214 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ +KLGMT V++ R +PVTV+ C V RT +K+GY A+Q+G G+ + V+K Sbjct: 7 GVLGKKLGMTQVFDEANRVVPVTVVEAGPCVVTRVRTPEKDGYSAIQLGYGQIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ + N++P++ E R D +G + F G VDVTG + GKGF+G Sbjct: 67 PLGDYLRKHNITPRRYFAEIRTD-DASEYTLGQEITVDIFQPGDYVDVTGRSKGKGFAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GL +HG HRS GS G PGRVFK +MAGRMG R TV+NL+V +VD Sbjct: 126 MKRHGFRGLGGSHGTQRKHRSPGSIGACATPGRVFKGLRMAGRMGNARTTVQNLKVQAVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 ++ LILVKG +PGA S +L+R + K K Sbjct: 186 AEKNLILVKGAIPGA-NGSLVLIRTAVKKGAAAK 218 >gi|117619475|ref|YP_854839.1| ribosomal protein L3 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166233112|sp|A0KF21|RL3_AERHH RecName: Full=50S ribosomal protein L3 gi|117560882|gb|ABK37830.1| ribosomal protein L3 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 210 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 95/212 (44%), Positives = 132/212 (62%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ ++ +V ++++ +GY A+QV G K Sbjct: 1 MTIGLVGRKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKSVETDGYNAIQVTTGAKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP G F+ V + L+EFR+ + + VGS +LVDVTG + GKGF Sbjct: 61 VTKPEAGHFAKAGVEAGRGLWEFRLN-NGETFTVGSELKVDLLADVKLVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF THG S+SHR GS G Q PGRVFK KKMAG MG RVT +NLE+V Sbjct: 120 AGTVKRWNFRTQDMTHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGHMGAERVTTQNLELV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA N ++V+ + K+ Sbjct: 180 RVDAERNLLLIKGAVPGA-TNGNVIVKPAVKA 210 >gi|251793827|ref|YP_003008559.1| 50S ribosomal protein L3 [Aggregatibacter aphrophilus NJ8700] gi|247535226|gb|ACS98472.1| ribosomal protein L3 [Aggregatibacter aphrophilus NJ8700] Length = 208 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 97/209 (46%), Positives = 132/209 (63%), Gaps = 3/209 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT ++N +G +PVTV+ ++ +V +TL+ +GY AVQV G K V+K Sbjct: 3 GLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKASRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V + L+EFR + ++ +G + F + VDVTG + GKGF G Sbjct: 63 PEVGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQGG 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV VD Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 180 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 AERKLLLVKGAVPGA-TGSDVIVKPAVKA 208 >gi|15603280|ref|NP_246354.1| 50S ribosomal protein L3 [Pasteurella multocida subsp. multocida str. Pm70] gi|42559689|sp|Q9CL32|RL3_PASMU RecName: Full=50S ribosomal protein L3 gi|12721790|gb|AAK03499.1| RpL3 [Pasteurella multocida subsp. multocida str. Pm70] Length = 209 Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 96/209 (45%), Positives = 133/209 (63%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT ++N +G IPVTV+ ++ +V +T++ +GY A+QV G K V+K Sbjct: 3 GLVGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTVETDGYSAIQVTTGSKKASRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V + L+EFR + ++ +G + F + VDVTG + GKGF+G Sbjct: 63 PEAGHFVKAGVEAGRGLWEFRTTEGEEF-TLGQEINVDIFADVKKVDVTGTSKGKGFAGG 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGNERVTVQSLEVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+LVKG VPGA N ++V+ + K+ Sbjct: 182 AERKLLLVKGAVPGA-TNGDVIVKPAVKA 209 >gi|19114797|ref|NP_593885.1| mitochondrial ribosomal protein subunit L9 (predicted) [Schizosaccharomyces pombe 972h-] gi|74665370|sp|Q9P6P6|RM09_SCHPO RecName: Full=60S ribosomal protein L9, mitochondrial; Flags: Precursor gi|7708596|emb|CAB90144.1| mitochondrial ribosomal protein subunit L9 (predicted) [Schizosaccharomyces pombe] Length = 259 Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 96/217 (44%), Positives = 134/217 (61%), Gaps = 2/217 (0%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R GV+ K GMT ++ + G ++P+T+L D Q + RT +K+GY AVQVG+G K K Sbjct: 42 LRPGVILVKKGMTNAWDEKTGMQVPLTILQFDRVQAIDVRTKEKHGYYAVQVGSGIRKPK 101 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +++K +G F S N+ PK + EFRV+ L+ G++F+ YF Q VDV G+T GKG Sbjct: 102 SITKAEQGNFFSHNIYPKMHVREFRVRDASGLVSPGTIFTTDYFKPKQYVDVKGITKGKG 161 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKR F G A+HG S+SHR+ GSTG P RV +KMAG MG TVKNL V Sbjct: 162 FAGVMKRWGFSGGNASHGASLSHRTPGSTGQNTTPSRVLPGRKMAGHMGHRSRTVKNLLV 221 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 +VD ILVKG +PG K++ + V D+ + + Sbjct: 222 WAVDADLECILVKGSIPGPNKSA-VYVTDTINRSTSA 257 >gi|293391695|ref|ZP_06636029.1| ribosomal protein L3 [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952229|gb|EFE02348.1| ribosomal protein L3 [Aggregatibacter actinomycetemcomitans D7S-1] Length = 208 Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 97/209 (46%), Positives = 132/209 (63%), Gaps = 3/209 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT ++N +G +PVTV+ ++ +V +TL+ +GY AVQV G K V+K Sbjct: 3 GLVGRKVGMTRIFNEDGVSVPVTVIEVEANRVTQVKTLENDGYTAVQVTTGSKKASRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V + L+EFR + ++ +G + F + VDVTG + GKGF G Sbjct: 63 PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQGG 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV VD Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGNERVTVQSLEVVRVD 180 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 AERKLLLVKGAVPGA-TGSDVIVKPAVKA 208 >gi|56417003|ref|YP_154077.1| 50S ribosomal protein L3 [Anaplasma marginale str. St. Maries] gi|222475371|ref|YP_002563788.1| 50S ribosomal protein L3 (rplC) [Anaplasma marginale str. Florida] gi|254995180|ref|ZP_05277370.1| 50S ribosomal protein L3 [Anaplasma marginale str. Mississippi] gi|255003354|ref|ZP_05278318.1| 50S ribosomal protein L3 [Anaplasma marginale str. Puerto Rico] gi|255004478|ref|ZP_05279279.1| 50S ribosomal protein L3 [Anaplasma marginale str. Virginia] gi|56388235|gb|AAV86822.1| 50S ribosomal protein L3 [Anaplasma marginale str. St. Maries] gi|222419509|gb|ACM49532.1| 50S ribosomal protein L3 (rplC) [Anaplasma marginale str. Florida] Length = 232 Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 106/220 (48%), Positives = 138/220 (62%), Gaps = 5/220 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ +K+G T V+ G R+PVT+L L++ VV ++ D +GY AV +G + + Sbjct: 6 RVGLLMKKVGSTAVFGDAGARVPVTLLLLEDTFVVDVKSRDVHGYNAVVLGV--RRPGRL 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP + LFE RV D + P G V +F GQ VDV G +IG+GF+ Sbjct: 64 NKPQICALRKKGIDVDCHLFESRVDTVDGVEPGGRVLVDHFFQ-GQFVDVAGRSIGRGFA 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNFGGLRA+HGVSISHRS GSTG QDPGRVFK KKMAG MG V+NL VV Sbjct: 123 GVMKRHNFGGLRASHGVSISHRSQGSTGQCQDPGRVFKGKKMAGHMGHTMSVVQNLRVVL 182 Query: 182 VDDKRGLILVKGC-VPGAKKNSWILVRDSFKSAVNCKGKV 220 VD +R L++V+G VPG S++LVRD+ K V +G V Sbjct: 183 VDSERSLLVVEGTNVPGP-CGSYVLVRDAVKKPVPREGGV 221 >gi|284006163|emb|CBA71405.1| 50S ribosomal protein L3 [Arsenophonus nasoniae] Length = 209 Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 93/202 (46%), Positives = 131/202 (64%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++N +V ++L+ +GY A+QV G K V K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKSLETDGYNAIQVTTGSKKANRVKK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L EFR+ ++++ VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRILREFRLSENEEFT-VGQSISVEIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA ++ I+ Sbjct: 182 AERNLLLVKGAVPGATGSNLIV 203 >gi|94676516|ref|YP_588776.1| ribosomal protein L3 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|123260557|sp|Q1LTD8|RL3_BAUCH RecName: Full=50S ribosomal protein L3 gi|94219666|gb|ABF13825.1| ribosomal protein L3 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 212 Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 83/202 (41%), Positives = 128/202 (63%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT ++ EG IP+T++ ++ + +++ +GY A QV G K V K Sbjct: 3 GLIGRKIGMTRIFTDEGISIPITIIQVEPNIITQVKSIQTDGYYAYQVTTGTKKPNLVIK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ + L+EFR++ ++ + +G + + YFT + VD+TG + GKGFSG Sbjct: 63 PEAGHFAKAGTKAGRSLWEFRLKHEEKPINIGEILTLEYFTNIKKVDITGTSKGKGFSGT 122 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF A+HG S+SHR GS G Q PG+VFK KKMAG MG RVT++NL+++ +D Sbjct: 123 VKRWNFHMQDASHGNSLSHRVTGSIGQNQTPGKVFKGKKMAGHMGNKRVTIQNLDIIRID 182 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 ++ L+L+KG +PGA N I+ Sbjct: 183 LRKNLLLIKGAIPGAPGNDLII 204 >gi|255722617|ref|XP_002546243.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240136732|gb|EER36285.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 279 Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 94/210 (44%), Positives = 128/210 (60%), Gaps = 1/210 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+ A K GM + G IP TVL +D+C+V+ + + GY ++ VG+ + N Sbjct: 57 RPGLFAIKRGMITWFRESGEAIPATVLEIDSCEVINSKNSEDYGYDSILVGSIDKLKNNK 116 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 + F +SPK K+ EFRV K D+L+ G+ + YF VGQ VD+ G+T GKGF+ Sbjct: 117 YETSIKMFEDAGISPKYKIGEFRVLKSDNLIEKGTELTADYFEVGQKVDIKGITKGKGFA 176 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR F G RATHGVS +HR+ G+ G Q+PGRV KKM GRMG N T NLEV+ Sbjct: 177 GVMKRWGFSGGRATHGVSKAHRTPGAMGGNQNPGRVLPGKKMPGRMGCNNKTEFNLEVLF 236 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D + G+++VKG VPG K+ + VRD+ K Sbjct: 237 TDKEAGVLIVKGNVPGPKR-GIVRVRDAIK 265 >gi|329122783|ref|ZP_08251355.1| 50S ribosomal protein L3 [Haemophilus aegyptius ATCC 11116] gi|327472047|gb|EGF17485.1| 50S ribosomal protein L3 [Haemophilus aegyptius ATCC 11116] Length = 208 Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 97/209 (46%), Positives = 132/209 (63%), Gaps = 3/209 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT ++N +G +PVTV+ ++ +V +TL+ +GY AVQV G K V+K Sbjct: 3 GLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSRKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V + L+EFR + ++ +G + F + VDVTG + GKGF G Sbjct: 63 PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQGG 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV VD Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVD 180 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+LVKG VPGA N ++V+ + K+ Sbjct: 181 AERKLLLVKGSVPGA-INGDVIVKPAVKA 208 >gi|242237859|ref|YP_002986040.1| ribosomal protein L3 [Dickeya dadantii Ech703] gi|242129916|gb|ACS84218.1| ribosomal protein L3 [Dickeya dadantii Ech703] Length = 209 Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 95/202 (47%), Positives = 129/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V +TL+ +GY AVQV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKTLENDGYRAVQVTTGAKKANRVNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L EFR+ + +D VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRTLREFRLAEGEDF-AVGQNISVEIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|256831827|ref|YP_003160554.1| 50S ribosomal protein L3 [Jonesia denitrificans DSM 20603] gi|256685358|gb|ACV08251.1| ribosomal protein L3 [Jonesia denitrificans DSM 20603] Length = 219 Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 93/209 (44%), Positives = 128/209 (61%), Gaps = 2/209 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 V+ +KLGMT V++ GR +PVTV+ ++ V RT+D +GY AVQV G+ + V+KP Sbjct: 13 VLGKKLGMTQVWDEAGRLVPVTVVAVEPNVVTQIRTVDNDGYAAVQVATGQIDPRKVTKP 72 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 ++G F V+P++ + E R D +G + F G VDV G T GKGF+G M Sbjct: 73 LKGHFEKAGVTPRRHVTEIRTS-DSGEYSLGQEVTVGVFEAGTKVDVIGTTKGKGFAGVM 131 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH F G A+HG +HR GS G P RVFK +MAGRMG +R+TV+NL V +VD Sbjct: 132 KRHGFAGASASHGAHRNHRKPGSIGAAATPSRVFKGLRMAGRMGHDRMTVQNLTVHAVDA 191 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +G +L+KG VPG K +LVR++ K A Sbjct: 192 DKGYVLLKGAVPGP-KGGVVLVRNAVKGA 219 >gi|158317791|ref|YP_001510299.1| ribosomal protein L3 [Frankia sp. EAN1pec] gi|226725178|sp|A8LC56|RL3_FRASN RecName: Full=50S ribosomal protein L3 gi|158113196|gb|ABW15393.1| ribosomal protein L3 [Frankia sp. EAN1pec] Length = 236 Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 91/194 (46%), Positives = 120/194 (61%), Gaps = 1/194 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ V +T D +GY AVQ+G GE + ++K Sbjct: 8 GLLGTKLGMTQVWDANNRVVPVTVIQAGPNVVTQVKTPDSDGYSAVQLGYGEIDPRRINK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 PMRG F + +P++ L E R + P G + F GQ+VDVTG + GKGF+G Sbjct: 68 PMRGHFETSGATPRRHLVELRTADAGNYRP-GQQLTGEVFDAGQVVDVTGTSKGKGFAGV 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GL A HGV HRS GS G PGRVFK +MAGRMG +RVTV L + +VD Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGHDRVTVAGLTIHAVD 186 Query: 184 DKRGLILVKGCVPG 197 +RG +L+KG +PG Sbjct: 187 TERGFLLIKGAIPG 200 >gi|254412263|ref|ZP_05026038.1| ribosomal protein L3 [Microcoleus chthonoplastes PCC 7420] gi|196181229|gb|EDX76218.1| ribosomal protein L3 [Microcoleus chthonoplastes PCC 7420] Length = 211 Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 92/197 (46%), Positives = 123/197 (62%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT V++ EGR +PVTV+ C+V +T +GY AVQ+G E K K Sbjct: 1 MSVGILGTKLGMTQVFDEEGRALPVTVVQAGPCRVTQIKTKQTDGYSAVQLGYHEVKEKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G + P + L E+R+ D+ +G V + F+ GQLVDV+G TIG+GF Sbjct: 61 VNKPEKGHLAKSEAPPLRHLREYRLDNTDEFQ-LGQVINAEIFSAGQLVDVSGNTIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRHNF HG S +HR GSTG PGR F KKMAGR GG R T++ L+VV Sbjct: 120 AGYQKRHNFKRGPMAHG-SKNHRLPGSTGAGTTPGRTFPGKKMAGRYGGKRQTIRKLQVV 178 Query: 181 SVDDKRGLILVKGCVPG 197 VD +R L+++KG VPG Sbjct: 179 RVDTERNLLIIKGAVPG 195 >gi|268593541|ref|ZP_06127762.1| 50S ribosomal protein L3 [Providencia rettgeri DSM 1131] gi|291310819|gb|EFE51272.1| 50S ribosomal protein L3 [Providencia rettgeri DSM 1131] Length = 209 Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 94/202 (46%), Positives = 129/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++N +V +T + +GY A+QV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKTAETDGYNAIQVTTGSKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L EFR++ D VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRILREFRIE-DSAEYTVGQSISVEIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA ++ I+ Sbjct: 182 AERNLLLVKGAVPGATGSNLIV 203 >gi|74316423|ref|YP_314163.1| 50S ribosomal protein L3P [Thiobacillus denitrificans ATCC 25259] gi|109893570|sp|Q3SLP9|RL3_THIDA RecName: Full=50S ribosomal protein L3 gi|74055918|gb|AAZ96358.1| ribosomal protein L3 [Thiobacillus denitrificans ATCC 25259] Length = 214 Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 100/213 (46%), Positives = 129/213 (60%), Gaps = 4/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ G +PVTVL + N +V RT + +GY AVQV G + Sbjct: 1 MSIGLVGRKVGMTRIFTENGASVPVTVLEMSNNRVTQVRTPENDGYSAVQVAYGSRRNSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD--DDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 V+K G ++ V + L EFRV D P G+ S F GQ VDVTG+T GK Sbjct: 61 VNKSEAGHYAKAGVDAGELLREFRVAADVAAQYQP-GAAVSVEVFQAGQKVDVTGVTQGK 119 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF+G +KRHNF RA+HG S SH GS G QDPGRVF K+M+G MG T +NLE Sbjct: 120 GFAGTIKRHNFKSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMSGHMGAVSCTKQNLE 179 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VV VD +RGL+L+KG VPG+ K ++VR + K Sbjct: 180 VVRVDAERGLVLLKGAVPGS-KGGHVVVRPAVK 211 >gi|258543821|ref|ZP_05704055.1| 50S ribosomal protein L3 [Cardiobacterium hominis ATCC 15826] gi|258520910|gb|EEV89769.1| 50S ribosomal protein L3 [Cardiobacterium hominis ATCC 15826] Length = 216 Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 94/213 (44%), Positives = 132/213 (61%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V +K+GMT ++N +G VTV+ + + +TL +GY AVQV GE K Sbjct: 5 MTMGLVGQKIGMTRIFNEDGSACAVTVIEVKPNIISQIKTLATDGYNAVQVSVGERKTNR 64 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 SK + G F+ NV+ + EFR+ +D +GS S F+ GQ VDV G ++GKG Sbjct: 65 TSKGLAGHFAKANVAAGVVIKEFRIAAEDVAQFSLGSAVDVSLFSEGQRVDVRGRSVGKG 124 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRH+F G R THG S+SHR GS G Q PGRVFK KKM+G +G + +NLE+ Sbjct: 125 FAGTIKRHHFSGQRKTHGNSLSHRVPGSIGQNQTPGRVFKGKKMSGHLGNKMRSTQNLEI 184 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA K ++++R S K+ Sbjct: 185 ARVDGERNLLLIKGAVPGA-KGGFVVIRPSVKA 216 >gi|88854682|ref|ZP_01129348.1| 50S ribosomal protein L3 [marine actinobacterium PHSC20C1] gi|88815843|gb|EAR25699.1| 50S ribosomal protein L3 [marine actinobacterium PHSC20C1] Length = 216 Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 92/210 (43%), Positives = 130/210 (61%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT V++ + +PVTV+ + V RT + +GY AVQ+ G+ + V+K Sbjct: 9 GLLGKKLGMTQVWDENNKLVPVTVVEITPNVVTQLRTPEVDGYSAVQIAYGQIDPRKVNK 68 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+P++ + E R D VG + FT G VDV G + GKGF+G Sbjct: 69 PLTGHFDKAGVTPRRHITEIRTSDAADYT-VGQELAVDIFTPGSKVDVVGTSKGKGFAGV 127 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF G+ A+HG +HR GS G P RVFK +MAGRMGG+RVTV NL V ++D Sbjct: 128 MKRHNFKGVSASHGSHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGDRVTVMNLAVHAID 187 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+KG VPGA + + VR++ K A Sbjct: 188 LEKGLVLIKGAVPGA-RGRIVFVRNAVKGA 216 >gi|297564037|ref|YP_003683010.1| 50S ribosomal protein L3 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848486|gb|ADH70504.1| 50S ribosomal protein L3 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 216 Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 97/208 (46%), Positives = 127/208 (61%), Gaps = 2/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ KLGMT V++ G+ +PVTVL C V RT D +GY A+Q+G G+ + V+K Sbjct: 8 GVLGEKLGMTQVFDDAGKMVPVTVLKAGPCVVSRIRTPDTDGYSAIQLGYGQINPRKVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ + + +++P++ E R D +G + F GQ VDVTG + GKGF+G Sbjct: 68 PLGDYLRAHDLTPRRHYVEVRTT-DATEYTLGQEVTADSFETGQKVDVTGKSKGKGFAGV 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GL A+HG HRS GS G PGRVFK +MAGRMG R TV+NL V SVD Sbjct: 127 MKRHGFRGLSASHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNVRKTVQNLTVHSVD 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 ++GLILVKG VPG +LVR + K Sbjct: 187 AEKGLILVKGAVPGP-NGGLVLVRTAVK 213 >gi|85060256|ref|YP_455958.1| 50S ribosomal protein L3 [Sodalis glossinidius str. 'morsitans'] gi|109893557|sp|Q2NQM2|RL3_SODGM RecName: Full=50S ribosomal protein L3 gi|84780776|dbj|BAE75553.1| 50S ribosomal protein L3 [Sodalis glossinidius str. 'morsitans'] Length = 209 Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 94/202 (46%), Positives = 129/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT ++ +G IPVTV+ ++ +V + L+ +GY A+QV AG K V K Sbjct: 3 GLIGRKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLENDGYRAIQVTAGTKKANRVIK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFRV+ D + + VG + F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRVE-DGEEVTVGQSITVELFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA I+ Sbjct: 182 VERNLLLVKGAVPGATGGDLIV 203 >gi|329898794|ref|ZP_08272466.1| LSU ribosomal protein L3p (L3e) [gamma proteobacterium IMCC3088] gi|328920746|gb|EGG28208.1| LSU ribosomal protein L3p (L3e) [gamma proteobacterium IMCC3088] Length = 211 Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 98/212 (46%), Positives = 129/212 (60%), Gaps = 1/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT V+ +G IPVTV+ + +V + LD +GY A+QV G K Sbjct: 1 MTIGLVGRKTGMTRVFTEDGVSIPVTVVEVSPNRVTQIKELDADGYRAIQVTTGTRKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G ++ V L+EFR++ +D VG+ + F VGQ VDV G + GKGF Sbjct: 61 VNKSAAGHYAKAGVEAGVGLWEFRLEAGEDAPEVGAELTVGRFEVGQKVDVAGKSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF ATHG S+SHR+ GS G Q PGRVFK KKMAG+MG VT + LEVV Sbjct: 121 QGGVKRWNFKMQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGQMGNVAVTTQGLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA ++VR + K+ Sbjct: 181 RVDAERNLLLIKGAVPGAPGGD-VVVRPAVKA 211 >gi|88801219|ref|ZP_01116760.1| 50S ribosomal protein L3 [Reinekea sp. MED297] gi|88776057|gb|EAR07291.1| 50S ribosomal protein L3 [Reinekea sp. MED297] Length = 210 Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 98/211 (46%), Positives = 128/211 (60%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK GMT V+ +G +PVTVL ++ +V +T+D +GY AVQ+ AG + Sbjct: 1 MSIGLIGRKAGMTRVFTEDGVSVPVTVLEIEPNRVAQVKTVDTDGYAAVQLTAGNKRANK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SK G F+ NV EF V D G + F GQ VDVTG + GKGF Sbjct: 61 LSKSQAGHFAKANVEAGVLTREFPV-ADVSEYETGKELTVELFEAGQKVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GA+KRHNF ATHG S+SHR+ GS G Q PGRV+K KKMAG MG R T ++LEVV Sbjct: 120 AGAIKRHNFRTQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGHMGAERHTTQSLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD R L+L+KG VPGA S ++V+ + K Sbjct: 180 RVDTDRNLLLIKGAVPGA-TGSHVVVQSAVK 209 >gi|149279664|ref|ZP_01885793.1| 50S ribosomal protein L3 [Pedobacter sp. BAL39] gi|149229700|gb|EDM35090.1| 50S ribosomal protein L3 [Pedobacter sp. BAL39] Length = 205 Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 89/204 (43%), Positives = 131/204 (64%), Gaps = 3/204 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ +G+ IP TV+ C V +T +K+GY++VQ+G EAK KN + Sbjct: 2 SGIIGKKVGMTSIFDADGKNIPCTVIEAGPCVVTQVKTEEKDGYVSVQLGFDEAKEKNTT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 +P++G F+ N +PK+KL EF ++ L +G+ + F G VDV G + GKGF G Sbjct: 62 QPLKGHFAKANTTPKRKLVEF--DPFEEPLELGATVTVDIFNEGDFVDVVGTSKGKGFQG 119 Query: 123 AMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG+ THG R+ GS G P RVFK +MAGRMGG+RV ++NL+V+ Sbjct: 120 VVKRHGFGGVGGQTHGQHNRMRAPGSLGAASYPARVFKGMRMAGRMGGDRVKIQNLQVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWIL 205 V + L++V G VPGAK + IL Sbjct: 180 VYADKNLVVVSGSVPGAKGSYVIL 203 >gi|198282637|ref|YP_002218958.1| 50S ribosomal protein L3 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666383|ref|YP_002424830.1| ribosomal protein L3 [Acidithiobacillus ferrooxidans ATCC 23270] gi|226725119|sp|B7J467|RL3_ACIF2 RecName: Full=50S ribosomal protein L3 gi|226725120|sp|B5ELX9|RL3_ACIF5 RecName: Full=50S ribosomal protein L3 gi|198247158|gb|ACH82751.1| ribosomal protein L3 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518596|gb|ACK79182.1| ribosomal protein L3 [Acidithiobacillus ferrooxidans ATCC 23270] Length = 210 Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 93/211 (44%), Positives = 133/211 (63%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT + +GR +PVTV+H+ V + + +GY AVQV G + + Sbjct: 1 MVMGLIGRKVGMTRIVAGDGRVLPVTVIHVAPNTVAQVKDIATDGYCAVQVATGTRRPQR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ + G F ++P + L EFRV D G F GQ VDV+G++ GKGF Sbjct: 61 VTSALAGHFRKNGIAPGRLLREFRV-ADTANYACGMDIDLDIFAEGQRVDVSGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GA+KRHNF RA+HG S+SHR+ GS GCRQ PGRVFK KKMAG +G +VT NLE+V Sbjct: 120 AGAIKRHNFRSNRASHGNSLSHRAPGSIGCRQTPGRVFKGKKMAGHLGAEQVTTLNLELV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D R L+++KG VPGA ++ +++R + + Sbjct: 180 RIDANRRLLMIKGAVPGA-RDGDVMIRPAVR 209 >gi|302849682|ref|XP_002956370.1| mitochondrial ribosomal protein L3 [Volvox carteri f. nagariensis] gi|300258276|gb|EFJ42514.1| mitochondrial ribosomal protein L3 [Volvox carteri f. nagariensis] Length = 428 Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 96/209 (45%), Positives = 132/209 (63%), Gaps = 2/209 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R G +A K GMT ++ G R+P+TVL +D CQVV +T + +G A+ +GAG + K Sbjct: 151 LRVGCIATKAGMTQEWDEHGVRVPLTVLWIDECQVVGVKTHEVHGRTALMLGAGHKRQKC 210 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +S GFF V + KK + E+ V +D LLP+G+ + ++F GQ VDVTG T KGF Sbjct: 211 MSPSQAGFFLKVGLPFKKLVAEWPVS-EDALLPMGTHITAAHFVAGQRVDVTGWTKYKGF 269 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G MKR F G A+HGVS+SHR+ G+ G RQDPG+V+K KK+ G MG R TV + V Sbjct: 270 QGVMKRWGFKGQPASHGVSLSHRAPGAIGNRQDPGKVWKGKKLPGCMGDERRTVHHCLVY 329 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VD R L+ ++G VPG K S + +RDS Sbjct: 330 KVDAARNLVYIRGQVPGPKGRS-VYLRDS 357 >gi|288917230|ref|ZP_06411599.1| ribosomal protein L3 [Frankia sp. EUN1f] gi|288351421|gb|EFC85629.1| ribosomal protein L3 [Frankia sp. EUN1f] Length = 237 Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 95/208 (45%), Positives = 124/208 (59%), Gaps = 2/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ V +T D +GY AVQ+G GE + ++K Sbjct: 8 GLLGTKLGMTQVWDANNRVVPVTVIQAGPNVVTQVKTTDNDGYSAVQLGFGEIDPRRINK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+RG F + V+P++ L E R D G + F GQ+VDVTG + GKGF+G Sbjct: 68 PLRGHFETSGVTPRRHLVELRT-ADAGNYRAGQELTGELFDAGQVVDVTGTSKGKGFAGV 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GL A HGV HRS GS G PGRVFK +MAGRMG RVTV L + +VD Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGHARVTVAGLTIHAVD 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 +RG +L+KG VPG + VR + K Sbjct: 187 TERGFLLIKGAVPG-PDGGLVFVRSAAK 213 >gi|330432124|gb|AEC17183.1| 50S ribosomal protein L3 [Gallibacterium anatis UMN179] Length = 209 Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 94/202 (46%), Positives = 129/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT ++N +G IPVTV+ ++ +V +TL+ +GY AVQV G K +V+K Sbjct: 3 GLIGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTLETDGYCAVQVTTGSKKASHVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V + L+EFRV + ++ +G + F + VDVTG + GKG++G Sbjct: 63 PEAGHFVKAGVEAGRGLWEFRVAEGEEFT-LGQEINVDIFADVKKVDVTGTSKGKGYAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PGRVFK KKM+G +G RVTV++LEVV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGRVFKGKKMSGHLGNERVTVQSLEVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA I+ Sbjct: 182 AERKLLLVKGAVPGATGGDLIV 203 >gi|30248418|ref|NP_840488.1| ribosomal protein L3 [Nitrosomonas europaea ATCC 19718] gi|42559613|sp|Q82X88|RL3_NITEU RecName: Full=50S ribosomal protein L3 gi|30138304|emb|CAD84312.1| Ribosomal protein L3 [Nitrosomonas europaea ATCC 19718] Length = 215 Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 96/212 (45%), Positives = 130/212 (61%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +K+GMT V+ G IPVTVL + +VV +T +K+GY AVQ+ G + Sbjct: 1 MKLGLIGKKIGMTRVFTESGNSIPVTVLDVSGNRVVQVKTEEKDGYSAVQLTQGYRRKNR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++K + G FS V + EFRV D + +GS S F VG VDV G++IGKG Sbjct: 61 ITKALSGHFSQAGVEAGTVIKEFRVDHDIGSDIKIGSEISVELFEVGSKVDVCGISIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KRHNF RA+HG S SH GS G QDPGRVF KKM G +G + TV+N+EV Sbjct: 121 YAGTIKRHNFSSSRASHGNSRSHNVPGSIGMAQDPGRVFPGKKMTGHLGNAQCTVQNIEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD RGL+ +KG VPG+K N + +R K Sbjct: 181 VRVDAGRGLLFLKGSVPGSKGN-GVFIRPGVK 211 >gi|260599639|ref|YP_003212210.1| 50S ribosomal protein L3 [Cronobacter turicensis z3032] gi|260218816|emb|CBA34171.1| 50S ribosomal protein L3 [Cronobacter turicensis z3032] Length = 209 Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 95/202 (47%), Positives = 127/202 (62%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ EG IPVTV+ ++ +V + L +GY AVQV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEEGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ D + VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLA-DGEEFTVGQSISVELFAEVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|84494786|ref|ZP_00993905.1| putative ribosomal protein L3 [Janibacter sp. HTCC2649] gi|84384279|gb|EAQ00159.1| putative ribosomal protein L3 [Janibacter sp. HTCC2649] Length = 218 Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 92/210 (43%), Positives = 126/210 (60%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ +KLGMT V++ E R IPVTV+ C V R + +GY AVQ+ G + V+K Sbjct: 11 GVLGKKLGMTQVWDAENRLIPVTVIEAGPCVVTQVRNAETDGYAAVQIAFGAIDPRKVTK 70 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+P++ L E R D +G + F GQ VD++ T GKGF+G Sbjct: 71 PLTGHFEKAGVTPRRHLVELRTA-DAAEYSLGQELTAETFEAGQAVDISATTKGKGFAGV 129 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G+ ++HG +HR GS G PGRVFK +MAGRMGG R T +NL + +V Sbjct: 130 MKRHGFHGVSSSHGSHKNHRKPGSIGGCATPGRVFKGMRMAGRMGGVRQTTQNLTIHAVV 189 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +GL+LVKG VPG + + +LVR++ K A Sbjct: 190 ADKGLLLVKGAVPG-PRGAVVLVRNAVKGA 218 >gi|326385099|ref|ZP_08206769.1| 50S ribosomal protein L3 [Gordonia neofelifaecis NRRL B-59395] gi|326196184|gb|EGD53388.1| 50S ribosomal protein L3 [Gordonia neofelifaecis NRRL B-59395] Length = 218 Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 93/208 (44%), Positives = 127/208 (61%), Gaps = 2/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ + V RT D++GY A+Q+ G + V+K Sbjct: 9 GILGTKLGMTQVFDENNRVVPVTVIATGSNVVTQLRTADRDGYTAIQLAYGAIDPRKVNK 68 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F+ V+P++ L E R+ D VG F G VDVTG + GKGF+G Sbjct: 69 PVAGQFAKAGVTPRRHLTEIRIN-DISEFEVGQELGADIFAEGVKVDVTGTSKGKGFAGV 127 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GL A+HG HRS GS G PGRVFK +MAGRMG ++VT +NL V VD Sbjct: 128 MKRHGFAGLGASHGAHRVHRSPGSIGGCATPGRVFKGTRMAGRMGSDKVTTQNLTVHKVD 187 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 + GL+L+KG +PG +K ++VRD+ K Sbjct: 188 AEAGLLLIKGAIPG-RKGGIVVVRDAVK 214 >gi|149247048|ref|XP_001527949.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146447903|gb|EDK42291.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 278 Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 94/211 (44%), Positives = 130/211 (61%), Gaps = 3/211 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+ K GM + +G + TV+ +D+C+V+ +T D++GY A +G + K+KN Sbjct: 59 RPGLFGIKRGMITWFTPKGEQFAATVIEIDSCEVIGQKTRDQHGYDANIIGTID-KLKNY 117 Query: 62 SKPMR-GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + F VSPK K EFRV ++L+PVG+ YF+VGQ+VD+ G+T GKGF Sbjct: 118 PREAELKMFEEAGVSPKHKFGEFRVLDTNNLIPVGTELKADYFSVGQMVDIKGITKGKGF 177 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NF G ATHGVS +HR+ GS G Q+PGRV KKM GRMG + T N EV+ Sbjct: 178 AGVMKRWNFAGNNATHGVSKAHRTPGSMGGNQNPGRVLPGKKMPGRMGCDNRTEFNKEVL 237 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD GL++VKG +PG K S + + D+ K Sbjct: 238 HVDGDAGLLIVKGNIPGPNK-SIVRISDALK 267 >gi|93005314|ref|YP_579751.1| 50S ribosomal protein L3 [Psychrobacter cryohalolentis K5] gi|109893543|sp|Q1QDI6|RL3_PSYCK RecName: Full=50S ribosomal protein L3 gi|92392992|gb|ABE74267.1| LSU ribosomal protein L3P [Psychrobacter cryohalolentis K5] Length = 212 Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 95/214 (44%), Positives = 131/214 (61%), Gaps = 4/214 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V +K GMT V+ G IPVTV+ + ++ + D +GY A+QV G + Sbjct: 1 MAIGLVGKKCGMTRVFTEAGASIPVTVVEISANRITQVKNTDVDGYQAIQVTTGTRRDSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLL--PVGSVFSPSYFTVGQLVDVTGMTIGK 118 V+ +G F+ V+ + ++EFR D DL +G F GQ+VDVTG + GK Sbjct: 61 VTAAQKGHFAKAGVAAGRGVWEFRA-NDSDLEGREIGGEILADLFEQGQMVDVTGNSKGK 119 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G +KRHNF ATHG S+SHR+ GSTG Q PG+VFK KKM G+MG RVTV+ LE Sbjct: 120 GFQGGVKRHNFSMQDATHGNSVSHRAIGSTGQNQSPGKVFKGKKMPGQMGNKRVTVQGLE 179 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V+SVD + GL+++KG +PGA ++VR S K+ Sbjct: 180 VISVDVENGLLVIKGAIPGATGGD-VIVRPSVKA 212 >gi|300721365|ref|YP_003710636.1| 50S ribosomal subunit protein L3 [Xenorhabdus nematophila ATCC 19061] gi|297627853|emb|CBJ88399.1| 50S ribosomal subunit protein L3 [Xenorhabdus nematophila ATCC 19061] Length = 210 Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 95/209 (45%), Positives = 132/209 (63%), Gaps = 1/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++N +V + + +GY A+QV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKNDETDGYRAIQVTTGSKKANRVNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 G F+ V + L EFR+ + D VG S F + VDVTG + GKGF+G Sbjct: 63 SEAGHFAKAGVEAGRILREFRLSEGDAEFTVGQSISVEIFADVKKVDVTGTSKGKGFAGT 122 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 123 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 182 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+LVKG VPGA NS ++V+ + K+ Sbjct: 183 AERNLLLVKGAVPGA-TNSNLIVKPAVKA 210 >gi|291001533|ref|XP_002683333.1| 50S ribosomal protein L3 [Naegleria gruberi] gi|284096962|gb|EFC50589.1| 50S ribosomal protein L3 [Naegleria gruberi] Length = 449 Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 93/216 (43%), Positives = 133/216 (61%), Gaps = 4/216 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+GV+A+KLGM ++ R+P+TVLH+ CQVV +T +K+GY A+Q+GAG K Sbjct: 142 VRTGVIAQKLGMIPFWDSYHARVPLTVLHIPKCQVVQVKTKEKDGYTALQLGAGSMSAKK 201 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+ G V PK E +V +D +LPVG + +F GQ +D++G + GK F Sbjct: 202 LTKPLLGHCQKAGVEPKHVYTEAKVT-EDAILPVGFEITARHFIPGQFIDISGRSKGKRF 260 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR F G ATHGVS+ HRS GSTG + +VFK KKMAGRMG ++T N V Sbjct: 261 AGPMKRWGFAGQPATHGVSVVHRSLGSTGTMIN--KVFKGKKMAGRMGHEQITQLNYYVY 318 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 VD + I VKG VPG +++ + D+ + + C Sbjct: 319 MVDVENNCIYVKGSVPGP-NGAYLYLNDASRKDLPC 353 >gi|78044555|ref|YP_361118.1| 50S ribosomal protein L3 [Carboxydothermus hydrogenoformans Z-2901] gi|109893418|sp|Q3A9R6|RL3_CARHZ RecName: Full=50S ribosomal protein L3 gi|77996670|gb|ABB15569.1| ribosomal protein L3 [Carboxydothermus hydrogenoformans Z-2901] Length = 209 Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 94/211 (44%), Positives = 135/211 (63%), Gaps = 4/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +GR IPVTV+ C VV +T+ +GY A+Q+G GE K Sbjct: 1 MPKGILGRKVGMTQIFTEDGRAIPVTVIEAGPCVVVQKKTIANDGYNAIQLGFGEIKESK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F+ NV P + L E RV+ + D VG FTVG+ VDVTG++ GKGF Sbjct: 61 VNKPLKGHFNRANVKPMRYLREIRVE-NIDAYEVGQEIKVDIFTVGEKVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH F HG S HR GS G + P RVF +K+ GR+G RVT++NLEVV Sbjct: 120 AGGIKRHGFHRGPMAHG-SKYHRRPGSLGAK-GPARVFLGRKLPGRLGMERVTIQNLEVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L+++KG VPG + S ++++++ K Sbjct: 178 KVDPERNLLVIKGSVPGI-RGSLLIIKEAVK 207 >gi|291542035|emb|CBL15145.1| LSU ribosomal protein L3P [Ruminococcus bromii L2-63] Length = 210 Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 130/212 (61%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT +++ +G IPVTV+ C V +T++ +GY +VQ+G G+ K Sbjct: 1 MQKAIIGKKIGMTQIFDEKGIMIPVTVVEAGPCVVTAKKTVENDGYASVQLGYGDVKPHK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+GFF V+PKK L EFR D D +G + FT G +DVTG + GKG Sbjct: 61 VNKPMKGFFDKAGVAPKKTLKEFRFT-DTDAYSIGDLVKADVFTPGDKIDVTGKSKGKGT 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF L+ +HG R GS G P RV+K K+MAG +G +VTV+NL VV Sbjct: 120 AGVIKRWNFHRLKESHGTGPCVRHGGSIGACSSPSRVWKGKRMAGHLGAEQVTVQNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + LI VKG +PG K ++++DS K+ Sbjct: 180 KVDAENNLIAVKGAIPGPNKGI-VVIKDSVKA 210 >gi|170729700|ref|YP_001775133.1| 50S ribosomal protein L3 [Xylella fastidiosa M12] gi|226730591|sp|B0U5A7|RL3_XYLFM RecName: Full=50S ribosomal protein L3 gi|167964493|gb|ACA11503.1| 50S ribosomal protein L3 [Xylella fastidiosa M12] Length = 215 Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 99/209 (47%), Positives = 130/209 (62%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G V RK GM+ V+ +GR IPVT++ +VV +T D +GY A+QV G + V+K Sbjct: 7 GFVGRKAGMSRVFLEDGRSIPVTLIEATANRVVQIKTSDVDGYDAIQVTVGSRRSVLVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P G F+ V + L+EFRV+K VGS S F VGQ VD+ G+T GKGF G Sbjct: 67 PESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGFQG 126 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHNF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG R +V+NLEV+ + Sbjct: 127 TIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEVIKI 186 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +R LI V+G +PGA +L+R + K Sbjct: 187 DVERFLIAVRGAIPGASGGD-VLIRSASK 214 >gi|50122951|ref|YP_052118.1| 50S ribosomal protein L3 [Pectobacterium atrosepticum SCRI1043] gi|81826993|sp|Q6CZX0|RL3_ERWCT RecName: Full=50S ribosomal protein L3 gi|49613477|emb|CAG76928.1| 50S ribosomal subunit protein L3 [Pectobacterium atrosepticum SCRI1043] Length = 209 Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 94/202 (46%), Positives = 129/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV AG K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTAGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRTLREFRLSEGEEFT-VGQSISVEIFADIKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|88860959|ref|ZP_01135595.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas tunicata D2] gi|88817172|gb|EAR26991.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas tunicata D2] Length = 211 Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 97/212 (45%), Positives = 129/212 (60%), Gaps = 1/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ ++ +T +GY A+QV AG K Sbjct: 1 MALGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRIAQIKTDANDGYNALQVTAGTKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ V + L+EFR+ D+ VGS + F VDVTG + GKGF Sbjct: 61 VNKAQAGHFAKAGVEAGRGLWEFRLSGDEGSFEVGSEITVELFNDVTKVDVTGTSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG MG RVT +NLEVV Sbjct: 121 QGGVKRWNFRTQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGHMGAERVTTQNLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPG+ N ++V+ + K+ Sbjct: 181 RVDVERNLLLVKGAVPGS-INGDVIVKPAVKA 211 >gi|156932231|ref|YP_001436147.1| 50S ribosomal protein L3 [Cronobacter sakazakii ATCC BAA-894] gi|166233141|sp|A7MPI7|RL3_ENTS8 RecName: Full=50S ribosomal protein L3 gi|156530485|gb|ABU75311.1| hypothetical protein ESA_00002 [Cronobacter sakazakii ATCC BAA-894] Length = 209 Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 95/202 (47%), Positives = 127/202 (62%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ EG IPVTV+ ++ +V + L +GY AVQV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEEGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ D + VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLA-DGEEYTVGQSISVELFAEVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|42559604|sp|Q7VTD3|RL3_BORPE RecName: Full=50S ribosomal protein L3 gi|42559605|sp|Q7W2F6|RL3_BORPA RecName: Full=50S ribosomal protein L3 gi|42559606|sp|Q7WRC5|RL3_BORBR RecName: Full=50S ribosomal protein L3 gi|33564827|emb|CAE39770.1| 50S ribosomal protein L3 [Bordetella parapertussis] gi|33575068|emb|CAE30531.1| 50S ribosomal protein L3 [Bordetella bronchiseptica RB50] Length = 233 Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 95/213 (44%), Positives = 128/213 (60%), Gaps = 3/213 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+V RK+GMT ++ +G IPVTVL + N +V ++L+ +GY A+QV G + V Sbjct: 16 RLGLVGRKVGMTRIFTEDGESIPVTVLDVSNNRVTQVKSLESDGYAAIQVTYGTRRATRV 75 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGS--VFSPSYFTVGQLVDVTGMTIGKG 119 KP G ++ L EFR+ + S F GQ VDVTG +IGKG Sbjct: 76 VKPQAGHYAKAGAEAGSILKEFRLDPARAAEFAAGAVIAVESVFEAGQQVDVTGTSIGKG 135 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRHNFG RA+HG S SHR GS G QDPGR+F K+M+G MG TV+NL+V Sbjct: 136 FAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMSGHMGDVTRTVQNLDV 195 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +RGL++VKG VPG ++VR + K+ Sbjct: 196 VRVDAERGLLMVKGAVPG-HAGGDVIVRPAVKA 227 >gi|183600753|ref|ZP_02962246.1| hypothetical protein PROSTU_04347 [Providencia stuartii ATCC 25827] gi|188019731|gb|EDU57771.1| hypothetical protein PROSTU_04347 [Providencia stuartii ATCC 25827] Length = 209 Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 94/202 (46%), Positives = 128/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++N +V +T + +GY A+QV G K VSK Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKTAETDGYNAIQVTTGSKKANRVSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L EFR ++ + VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRILREFRTEEGAEF-NVGQSISVEIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|307132839|ref|YP_003884855.1| 50S ribosomal subunit protein L3 [Dickeya dadantii 3937] gi|306530368|gb|ADN00299.1| 50S ribosomal subunit protein L3 [Dickeya dadantii 3937] Length = 209 Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 95/202 (47%), Positives = 128/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V +TL+ +GY AVQV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKTLENDGYSAVQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L EFR+ D + VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRVLREFRLA-DGEEFAVGQDISVEIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|302558994|ref|ZP_07311336.1| 50S ribosomal protein L3 [Streptomyces griseoflavus Tu4000] gi|302476612|gb|EFL39705.1| 50S ribosomal protein L3 [Streptomyces griseoflavus Tu4000] Length = 214 Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 96/210 (45%), Positives = 127/210 (60%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ GE + V+K Sbjct: 7 GILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 67 PLKGHFAKADVTPRRHLVEIRTS-DASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +VD Sbjct: 126 MKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+KG VPG +LVR + K A Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214 >gi|227876215|ref|ZP_03994331.1| ribosomal protein L3 [Mobiluncus mulieris ATCC 35243] gi|307701180|ref|ZP_07638202.1| 50S ribosomal protein L3 [Mobiluncus mulieris FB024-16] gi|227843176|gb|EEJ53369.1| ribosomal protein L3 [Mobiluncus mulieris ATCC 35243] gi|307613574|gb|EFN92821.1| 50S ribosomal protein L3 [Mobiluncus mulieris FB024-16] Length = 218 Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 88/207 (42%), Positives = 129/207 (62%), Gaps = 2/207 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RKLGMT V++ EG+ +PVTV+ ++ V RT +++GY A+Q+G G+ + V+KP Sbjct: 12 LLGRKLGMTQVWDEEGKLVPVTVVEVEKNVVTDIRTPERDGYTALQLGFGQLDERKVTKP 71 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M G F+ V+P++ L E R D +G F G LVDVTG T GKGF+G M Sbjct: 72 MAGHFAKSGVTPRRHLAEVRTT-DAGSYELGQELGADLFETGALVDVTGNTKGKGFAGVM 130 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH F G+ ++HG +HR GS G PGRVF+ MAGRMGG R T+ NL+V ++D Sbjct: 131 KRHGFQGVSSSHGAHRNHRKPGSIGACATPGRVFRGLNMAGRMGGERRTIMNLKVQAIDA 190 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211 +GL+++ G +PG K +++R + K Sbjct: 191 DKGLVVIAGAIPGP-KGGIVMIRSAVK 216 >gi|146313385|ref|YP_001178459.1| 50S ribosomal protein L3 [Enterobacter sp. 638] gi|166990936|sp|A4WFC8|RL3_ENT38 RecName: Full=50S ribosomal protein L3 gi|145320261|gb|ABP62408.1| LSU ribosomal protein L3P [Enterobacter sp. 638] Length = 209 Score = 171 bits (433), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 94/202 (46%), Positives = 129/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGSKKASRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQDISVELFAEVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA ++ I+ Sbjct: 182 AERNLLLVKGAVPGATGSNLIV 203 >gi|161609283|ref|NP_886582.2| 50S ribosomal protein L3 [Bordetella bronchiseptica RB50] gi|161610405|ref|NP_882394.2| 50S ribosomal protein L3 [Bordetella parapertussis 12822] gi|161610757|ref|NP_882123.2| 50S ribosomal protein L3 [Bordetella pertussis Tohama I] Length = 229 Score = 171 bits (433), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 95/213 (44%), Positives = 128/213 (60%), Gaps = 3/213 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+V RK+GMT ++ +G IPVTVL + N +V ++L+ +GY A+QV G + V Sbjct: 12 RLGLVGRKVGMTRIFTEDGESIPVTVLDVSNNRVTQVKSLESDGYAAIQVTYGTRRATRV 71 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGS--VFSPSYFTVGQLVDVTGMTIGKG 119 KP G ++ L EFR+ + S F GQ VDVTG +IGKG Sbjct: 72 VKPQAGHYAKAGAEAGSILKEFRLDPARAAEFAAGAVIAVESVFEAGQQVDVTGTSIGKG 131 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRHNFG RA+HG S SHR GS G QDPGR+F K+M+G MG TV+NL+V Sbjct: 132 FAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMSGHMGDVTRTVQNLDV 191 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +RGL++VKG VPG ++VR + K+ Sbjct: 192 VRVDAERGLLMVKGAVPG-HAGGDVIVRPAVKA 223 >gi|120553652|ref|YP_958003.1| ribosomal protein L3 [Marinobacter aquaeolei VT8] gi|166233153|sp|A1TYJ7|RL3_MARAV RecName: Full=50S ribosomal protein L3 gi|120323501|gb|ABM17816.1| LSU ribosomal protein L3P [Marinobacter aquaeolei VT8] Length = 212 Score = 171 bits (433), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 91/199 (45%), Positives = 126/199 (63%), Gaps = 1/199 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG+ +PVTV+ ++ ++ +TL+ +GY AVQV G + Sbjct: 1 MAIGVVGRKAGMTRIFTDEGQALPVTVIEVEPNRITQLKTLESDGYRAVQVTVGSRRSSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + ++EFR+ + + L G + S F GQ+VD G + GKG Sbjct: 61 VNKAAAGHFAKAGVEAGRGVWEFRLADGEGEDLAAGGELTVSVFEDGQVVDAVGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG+MG +VTV+NL++ Sbjct: 121 FQGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQMGNAQVTVQNLKI 180 Query: 180 VSVDDKRGLILVKGCVPGA 198 V VD +R L+LV G VPGA Sbjct: 181 VRVDAERNLLLVSGAVPGA 199 >gi|163752594|ref|ZP_02159773.1| ribosomal protein L3 [Shewanella benthica KT99] gi|161327506|gb|EDP98713.1| ribosomal protein L3 [Shewanella benthica KT99] Length = 212 Score = 171 bits (433), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 91/206 (44%), Positives = 129/206 (62%), Gaps = 1/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G +PVTV+ + + +V +TL+ +GY A+QV G K Sbjct: 1 MAIGLIGRKVGMTRIFCEDGVSVPVTVIEITSNRVTQVKTLETDGYRALQVTTGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G F+ V + L+E R+ D+ + + VG+ + F VDVTG + GKG Sbjct: 61 ITKPEAGHFAKAGVEAGRGLWEVRLADDEGEGIEVGAELNVDIFADIAKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF THG S+SHRS+GS G Q PGRVFK KKM+G MG RVT +NL+V Sbjct: 121 FQGGIKRWNFHAQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205 + VD +R L+LVKG VPGA + I+ Sbjct: 181 IRVDAERNLLLVKGAVPGAINGNLII 206 >gi|284923326|emb|CBG36420.1| 50S ribosomal subunit protein L3 [Escherichia coli 042] Length = 209 Score = 171 bits (433), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 93/202 (46%), Positives = 129/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K +V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANSVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|107103776|ref|ZP_01367694.1| hypothetical protein PaerPA_01004847 [Pseudomonas aeruginosa PACS2] Length = 200 Score = 171 bits (433), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 92/201 (45%), Positives = 128/201 (63%), Gaps = 3/201 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++ EG IPVTV+ ++ +V +T + +GY AVQV AGE + V+K G F+ Sbjct: 1 MTRIFTEEGVSIPVTVIEVEPNRVTQFKTEETDGYRAVQVTAGERRASRVTKAQAGHFAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 NV+ + ++EFR+ ++ G + F GQ+VDVTG + GKGF+G +KR NF G Sbjct: 61 ANVAAGRGVWEFRL--GEEQYAAGDQITVDLFQAGQMVDVTGESKGKGFAGTIKRWNFRG 118 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 THG S+SHR GS G Q PGRVFK KKM+G +G RVTV++LE+V VD +R L+LV Sbjct: 119 QDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHLGAERVTVQSLEIVRVDAERNLLLV 178 Query: 192 KGCVPGAKKNSWILVRDSFKS 212 KG VPGA ++VR + K+ Sbjct: 179 KGAVPGATGGD-VIVRPAAKA 198 >gi|127511092|ref|YP_001092289.1| 50S ribosomal protein L3 [Shewanella loihica PV-4] gi|166234593|sp|A3Q982|RL3_SHELP RecName: Full=50S ribosomal protein L3 gi|126636387|gb|ABO22030.1| LSU ribosomal protein L3P [Shewanella loihica PV-4] Length = 212 Score = 171 bits (433), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 90/206 (43%), Positives = 127/206 (61%), Gaps = 1/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G IPVTV+ + +V +TL+ +GY A+Q+ G K Sbjct: 1 MAIGLIGRKVGMTRIFTEDGASIPVTVIEIAANRVAQVKTLETDGYRALQITTGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G F+ V + L+E R+ + + + VG+ + F VDVTG + GKG Sbjct: 61 ITKPEAGHFAKAGVEAGRGLWEMRLADGEGEGIEVGAELNVDIFADVAKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S++HR++GS G Q PGRVFK KKM+G MG RVT +NL+V Sbjct: 121 FQGGIKRWNFRTQDATHGNSLAHRANGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205 V VD +R L+LVKG VPGA I+ Sbjct: 181 VRVDAERNLLLVKGAVPGATNGDLII 206 >gi|323164885|gb|EFZ50676.1| ribosomal L3 family protein [Shigella sonnei 53G] Length = 209 Score = 171 bits (433), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 93/202 (46%), Positives = 128/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFAEVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|269958584|ref|YP_003328371.1| 50S ribosomal protein L3 [Anaplasma centrale str. Israel] gi|269848413|gb|ACZ49057.1| 50S ribosomal protein L3 [Anaplasma centrale str. Israel] Length = 232 Score = 171 bits (433), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 106/220 (48%), Positives = 138/220 (62%), Gaps = 5/220 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ +K+G T V+ G R+PVT+L L++ VV + D +GY AV +G + + Sbjct: 6 RVGLLMKKIGNTAVFGDSGARVPVTLLLLEDTLVVEVKRRDVHGYDAVVLGV--RRPGRL 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP + LFE RV D + P GS S +F GQ VDV G +IG+GF+ Sbjct: 64 NKPQVCALRKKGIDVDCHLFESRVDAVDGIEP-GSRISVDHFFQGQFVDVAGRSIGRGFA 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF GLRA+HGVSISHRS GSTG QDPGRVFK KKMAG MG + V+NL VV Sbjct: 123 GVMKRHNFRGLRASHGVSISHRSQGSTGQCQDPGRVFKGKKMAGHMGCSMSVVQNLRVVL 182 Query: 182 VDDKRGLILVKGC-VPGAKKNSWILVRDSFKSAVNCKGKV 220 VD +R L++V+G VPG+ S++LVRD+ K V G V Sbjct: 183 VDSERSLLVVEGTNVPGS-CGSYVLVRDAVKKPVPGGGNV 221 >gi|82701900|ref|YP_411466.1| ribosomal protein L3 [Nitrosospira multiformis ATCC 25196] gi|109893529|sp|Q2YAZ7|RL3_NITMU RecName: Full=50S ribosomal protein L3 gi|82409965|gb|ABB74074.1| LSU ribosomal protein L3P [Nitrosospira multiformis ATCC 25196] Length = 236 Score = 171 bits (433), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 96/214 (44%), Positives = 132/214 (61%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG PVTVL + N +V +T +GY AVQV G+ + Sbjct: 1 MSLGLVGRKVGMTRIFTEEGDSQPVTVLDVSNNRVTQIKTPATDGYSAVQVTFGKRRAIR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP G F+ V + L EFRV ++ L G+V F GQ VDVTG +IGKG Sbjct: 61 VNKPSAGHFAKAAVEAGEILREFRVAEEILGTLSPGTVIGLDIFQPGQRVDVTGTSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++GA+KRH F RA+HG S SH GS G QDPGRVF K+M G +G R T++NLE+ Sbjct: 121 YAGAIKRHGFASNRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGNVRRTIQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + +D +RGL+++KG +PG+K + V S +SA Sbjct: 181 LRIDAERGLLIIKGAIPGSKGGD-VTVSPSIRSA 213 >gi|291619176|ref|YP_003521918.1| RplC [Pantoea ananatis LMG 20103] gi|291154206|gb|ADD78790.1| RplC [Pantoea ananatis LMG 20103] gi|327395506|dbj|BAK12928.1| 50S ribosomal protein L3 RplC [Pantoea ananatis AJ13355] Length = 209 Score = 171 bits (432), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 93/202 (46%), Positives = 128/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L+ +GY A+QV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKGLENDGYQAIQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR + D+ VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRTVEGDEY-AVGQSISVEIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|238898927|ref|YP_002924609.1| 50S ribosomal subunit protein L3 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259646549|sp|C4K7B8|RL3_HAMD5 RecName: Full=50S ribosomal protein L3 gi|229466687|gb|ACQ68461.1| 50S ribosomal subunit protein L3 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 210 Score = 171 bits (432), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 94/195 (48%), Positives = 128/195 (65%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +KLGMT ++ +G IPVTV+ + +V + LD +GY+A+Q+ G K V+K Sbjct: 3 GLVGKKLGMTRIFTKDGISIPVTVIEIKANRVTQIKNLDSDGYLALQITTGTKKASRVNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ NV + L+EFRV + D + +G F S F G +VDVTG + GKGFSG Sbjct: 63 PKAGHFAKANVEAGRGLWEFRVSEQDATVFLGHTFEVSMFKPGDIVDVTGKSKGKGFSGT 122 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF A+HG S+SHR GS G Q PG+VFK KKM+G++G RVT++NLEVV VD Sbjct: 123 VKRWNFRTQDASHGNSLSHRVPGSIGQNQTPGKVFKGKKMSGQLGNERVTIQNLEVVRVD 182 Query: 184 DKRGLILVKGCVPGA 198 R ++L+KG VPGA Sbjct: 183 VVREILLIKGGVPGA 197 >gi|157377449|ref|YP_001476049.1| 50S ribosomal protein L3 [Shewanella sediminis HAW-EB3] gi|189029482|sp|A8G1E8|RL3_SHESH RecName: Full=50S ribosomal protein L3 gi|157319823|gb|ABV38921.1| ribosomal protein L3 [Shewanella sediminis HAW-EB3] Length = 212 Score = 171 bits (432), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 91/206 (44%), Positives = 128/206 (62%), Gaps = 1/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G IPVTV+ + + +V +TL+ +GY A+QV G K Sbjct: 1 MAIGLIGRKVGMTRIFAEDGVSIPVTVIEIASNRVTQVKTLETDGYRALQVTTGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G F+ V + L+E R+ + + + VG+ + F VDVTG + GKG Sbjct: 61 ITKPEAGHFAKAGVEAGRGLWEVRLADGEGESIEVGAELNVDIFADVAKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF THG S++HRS+GS G Q PGRVFK KKM+G MG RVT +NL+V Sbjct: 121 FQGGIKRWNFHAQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205 V VD +R L+LVKG VPGA + I+ Sbjct: 181 VRVDAERNLLLVKGAVPGATNGNLII 206 >gi|312200020|ref|YP_004020081.1| 50S ribosomal protein L3 [Frankia sp. EuI1c] gi|311231356|gb|ADP84211.1| 50S ribosomal protein L3 [Frankia sp. EuI1c] Length = 232 Score = 171 bits (432), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 96/208 (46%), Positives = 124/208 (59%), Gaps = 2/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ + R +P+TV+ V +T D +GY AVQ+G GE + +K Sbjct: 8 GLLGTKLGMTQVWDAQNRVVPITVIQAGPNVVTQVKTPDNDGYAAVQLGYGEIDPRKTNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P RG F++ V+P++ L E R D G S F G +VDVTG + GKGF+G Sbjct: 68 PTRGHFAAAGVTPRRHLAELRT-ADAGNYSAGLQLDGSVFDAGTVVDVTGTSKGKGFAGV 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GL A HGV HRS GS G PGRVFK +MAGRMG RVTV L V +VD Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGNVRVTVAGLTVHAVD 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 +RGL+L+KG VPG + VR + K Sbjct: 187 AERGLLLIKGAVPGV-DGGLVFVRSAAK 213 >gi|50955566|ref|YP_062854.1| 50S ribosomal protein L3 [Leifsonia xyli subsp. xyli str. CTCB07] gi|81826588|sp|Q6ACZ5|RL3_LEIXX RecName: Full=50S ribosomal protein L3 gi|50952048|gb|AAT89749.1| 50S ribosomal protein L3 [Leifsonia xyli subsp. xyli str. CTCB07] Length = 219 Score = 171 bits (432), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 92/210 (43%), Positives = 126/210 (60%), Gaps = 1/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT V++ IPVTV+ + V RT + +GY AVQ+ G+ + V+K Sbjct: 11 GLLGKKLGMTQVWDENDTLIPVTVIEITPNVVTQVRTPEADGYNAVQIAYGQIDRRKVNK 70 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ L E R + + F GQLVDV G + KGF+G Sbjct: 71 PSAGHFDKAGVTPRRHLTEVRTADAAEYSAGQELTVDGTFEAGQLVDVVGTSKSKGFAGV 130 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF G+ A+HG +HR GS G P RVFK +MAGRMGG RVTV NL+V ++D Sbjct: 131 MKRHNFQGVSASHGAHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGERVTVLNLKVQAID 190 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+LVKG VPGA + + VR++ K A Sbjct: 191 AEKGLLLVKGAVPGA-RGRIVFVRNAVKGA 219 >gi|212708981|ref|ZP_03317109.1| hypothetical protein PROVALCAL_00013 [Providencia alcalifaciens DSM 30120] gi|212688347|gb|EEB47875.1| hypothetical protein PROVALCAL_00013 [Providencia alcalifaciens DSM 30120] Length = 209 Score = 171 bits (432), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 93/202 (46%), Positives = 129/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++N +V +T + +GY A+QV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKTAETDGYNAIQVTTGSKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L EFR ++ + VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRILREFRTEEGAEF-NVGQSISVEIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA ++ I+ Sbjct: 182 AERNLLLVKGAVPGATGSNLIV 203 >gi|256025952|ref|ZP_05439817.1| 50S ribosomal protein L3 [Escherichia sp. 4_1_40B] Length = 209 Score = 171 bits (432), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 93/202 (46%), Positives = 128/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLTNDGYRAIQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|320531960|ref|ZP_08032861.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 171 str. F0337] gi|320135827|gb|EFW27874.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 171 str. F0337] Length = 222 Score = 171 bits (432), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 91/209 (43%), Positives = 129/209 (61%), Gaps = 2/209 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ KLGMT +++ G PVTV+ +D V RT++ +GY AVQ+ G+ + V+KP Sbjct: 16 LLGTKLGMTQIWDENGVLRPVTVVRVDTNVVTQVRTIETDGYEAVQLAFGDIDARKVTKP 75 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + G F+ V V P++ + E R + P G + F VGQLVDVTG + GKGF+G M Sbjct: 76 LAGHFAKVGVEPRRHVAEIRTSLASEFTP-GQELAADTFEVGQLVDVTGTSKGKGFAGVM 134 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH F G+ A+HG +HR GS G PGR+FK +MAGRMG R TV+NL++ VD Sbjct: 135 KRHGFAGVGASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGHARRTVQNLKIRGVDV 194 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +G++LV G +PG K S ++VR + K A Sbjct: 195 DKGVLLVNGAIPG-PKGSVVVVRTAVKGA 222 >gi|238792938|ref|ZP_04636568.1| 50S ribosomal protein L3 [Yersinia intermedia ATCC 29909] gi|238727792|gb|EEQ19316.1| 50S ribosomal protein L3 [Yersinia intermedia ATCC 29909] Length = 209 Score = 171 bits (432), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 93/202 (46%), Positives = 128/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V ++L+ +GY AVQV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYRAVQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ + + G S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLPEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG MG RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGHMGDERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGGNLIV 203 >gi|322831072|ref|YP_004211099.1| 50S ribosomal protein L3 [Rahnella sp. Y9602] gi|321166273|gb|ADW71972.1| 50S ribosomal protein L3 [Rahnella sp. Y9602] Length = 209 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 93/202 (46%), Positives = 128/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + LD +GY AVQV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLDNDGYRAVQVTTGSKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ + ++ G S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-AGQNISVEIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGGNLIV 203 >gi|15803847|ref|NP_289881.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 EDL933] gi|15833439|ref|NP_312212.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 str. Sakai] gi|16131199|ref|NP_417779.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12 substr. MG1655] gi|24114598|ref|NP_709108.1| 50S ribosomal protein L3 [Shigella flexneri 2a str. 301] gi|26249915|ref|NP_755955.1| 50S ribosomal protein L3 [Escherichia coli CFT073] gi|30065379|ref|NP_839550.1| 50S ribosomal protein L3 [Shigella flexneri 2a str. 2457T] gi|82545683|ref|YP_409630.1| 50S ribosomal protein L3 [Shigella boydii Sb227] gi|82778616|ref|YP_404965.1| 50S ribosomal protein L3 [Shigella dysenteriae Sd197] gi|89110690|ref|AP_004470.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12 substr. W3110] gi|91212757|ref|YP_542743.1| 50S ribosomal protein L3 [Escherichia coli UTI89] gi|110643559|ref|YP_671289.1| 50S ribosomal protein L3 [Escherichia coli 536] gi|110807167|ref|YP_690687.1| 50S ribosomal protein L3 [Shigella flexneri 5 str. 8401] gi|117625598|ref|YP_858921.1| 50S ribosomal protein L3 [Escherichia coli APEC O1] gi|157156606|ref|YP_001464788.1| 50S ribosomal protein L3 [Escherichia coli E24377A] gi|157162794|ref|YP_001460112.1| 50S ribosomal protein L3 [Escherichia coli HS] gi|168752799|ref|ZP_02777821.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4113] gi|168753088|ref|ZP_02778095.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4401] gi|168769186|ref|ZP_02794193.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4486] gi|168785139|ref|ZP_02810146.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC869] gi|170018444|ref|YP_001723398.1| 50S ribosomal protein L3 [Escherichia coli ATCC 8739] gi|170082839|ref|YP_001732159.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12 substr. DH10B] gi|170680319|ref|YP_001745582.1| 50S ribosomal protein L3 [Escherichia coli SMS-3-5] gi|187733677|ref|YP_001882004.1| 50S ribosomal protein L3 [Shigella boydii CDC 3083-94] gi|188495143|ref|ZP_03002413.1| ribosomal protein L3 [Escherichia coli 53638] gi|191171516|ref|ZP_03033064.1| ribosomal protein L3 [Escherichia coli F11] gi|195939869|ref|ZP_03085251.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 str. EC4024] gi|208806486|ref|ZP_03248823.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4206] gi|208812110|ref|ZP_03253439.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4045] gi|208818332|ref|ZP_03258652.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4042] gi|209398982|ref|YP_002272776.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4115] gi|209920786|ref|YP_002294870.1| 50S ribosomal protein L3 [Escherichia coli SE11] gi|215488620|ref|YP_002331051.1| 50S ribosomal protein L3 [Escherichia coli O127:H6 str. E2348/69] gi|217325713|ref|ZP_03441797.1| ribosomal protein L3 [Escherichia coli O157:H7 str. TW14588] gi|218550595|ref|YP_002384386.1| 50S ribosomal protein L3 [Escherichia fergusonii ATCC 35469] gi|218555877|ref|YP_002388790.1| 50S ribosomal protein L3 [Escherichia coli IAI1] gi|218560381|ref|YP_002393294.1| 50S ribosomal protein L3 [Escherichia coli S88] gi|218691606|ref|YP_002399818.1| 50S ribosomal protein L3 [Escherichia coli ED1a] gi|218697012|ref|YP_002404679.1| 50S ribosomal protein L3 [Escherichia coli 55989] gi|218702082|ref|YP_002409711.1| 50S ribosomal protein L3 [Escherichia coli IAI39] gi|218706927|ref|YP_002414446.1| 50S ribosomal protein L3 [Escherichia coli UMN026] gi|227883451|ref|ZP_04001256.1| 50S ribosomal protein L3 [Escherichia coli 83972] gi|237703050|ref|ZP_04533531.1| ribosomal protein L3 [Escherichia sp. 3_2_53FAA] gi|238902411|ref|YP_002928207.1| 50S ribosomal subunit protein L3 [Escherichia coli BW2952] gi|253771856|ref|YP_003034687.1| 50S ribosomal protein L3 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254038481|ref|ZP_04872537.1| 50S ribosomal protein L3 [Escherichia sp. 1_1_43] gi|254163248|ref|YP_003046356.1| 50S ribosomal protein L3 [Escherichia coli B str. REL606] gi|254795257|ref|YP_003080094.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 str. TW14359] gi|256020679|ref|ZP_05434544.1| 50S ribosomal protein L3 [Shigella sp. D9] gi|260846118|ref|YP_003223896.1| 50S ribosomal subunit protein L3 [Escherichia coli O103:H2 str. 12009] gi|260857441|ref|YP_003231332.1| 50S ribosomal subunit protein L3 [Escherichia coli O26:H11 str. 11368] gi|260870063|ref|YP_003236465.1| 50S ribosomal subunit protein L3 [Escherichia coli O111:H- str. 11128] gi|261224625|ref|ZP_05938906.1| 50S ribosomal subunit protein L3 [Escherichia coli O157:H7 str. FRIK2000] gi|261254481|ref|ZP_05947014.1| 50S ribosomal subunit protein L3 [Escherichia coli O157:H7 str. FRIK966] gi|291284678|ref|YP_003501496.1| 50S ribosomal protein L3 [Escherichia coli O55:H7 str. CB9615] gi|293406917|ref|ZP_06650841.1| 50S ribosomal protein L3 [Escherichia coli FVEC1412] gi|293412739|ref|ZP_06655407.1| 50S ribosomal protein L3 [Escherichia coli B354] gi|293416737|ref|ZP_06659374.1| 50S ribosomal protein L3 [Escherichia coli B185] gi|293453638|ref|ZP_06664057.1| 50S ribosomal protein L3 [Escherichia coli B088] gi|297516596|ref|ZP_06934982.1| 50S ribosomal protein L3 [Escherichia coli OP50] gi|298382657|ref|ZP_06992252.1| 50S ribosomal protein L3 [Escherichia coli FVEC1302] gi|300815470|ref|ZP_07095695.1| 50S ribosomal protein L3 [Escherichia coli MS 107-1] gi|300822877|ref|ZP_07103013.1| 50S ribosomal protein L3 [Escherichia coli MS 119-7] gi|300896668|ref|ZP_07115184.1| 50S ribosomal protein L3 [Escherichia coli MS 198-1] gi|300903568|ref|ZP_07121490.1| 50S ribosomal protein L3 [Escherichia coli MS 84-1] gi|300918293|ref|ZP_07134897.1| 50S ribosomal protein L3 [Escherichia coli MS 115-1] gi|300921871|ref|ZP_07138027.1| 50S ribosomal protein L3 [Escherichia coli MS 182-1] gi|300932213|ref|ZP_07147492.1| 50S ribosomal protein L3 [Escherichia coli MS 187-1] gi|300935318|ref|ZP_07150328.1| 50S ribosomal protein L3 [Escherichia coli MS 21-1] gi|300946542|ref|ZP_07160807.1| 50S ribosomal protein L3 [Escherichia coli MS 116-1] gi|300954805|ref|ZP_07167232.1| 50S ribosomal protein L3 [Escherichia coli MS 175-1] gi|300973999|ref|ZP_07172406.1| 50S ribosomal protein L3 [Escherichia coli MS 200-1] gi|300979891|ref|ZP_07174767.1| 50S ribosomal protein L3 [Escherichia coli MS 45-1] gi|301018816|ref|ZP_07183060.1| 50S ribosomal protein L3 [Escherichia coli MS 69-1] gi|301021130|ref|ZP_07185170.1| 50S ribosomal protein L3 [Escherichia coli MS 196-1] gi|301046091|ref|ZP_07193269.1| 50S ribosomal protein L3 [Escherichia coli MS 185-1] gi|301305529|ref|ZP_07211621.1| 50S ribosomal protein L3 [Escherichia coli MS 124-1] gi|301325113|ref|ZP_07218647.1| 50S ribosomal protein L3 [Escherichia coli MS 78-1] gi|301643860|ref|ZP_07243891.1| 50S ribosomal protein L3 [Escherichia coli MS 146-1] gi|306816337|ref|ZP_07450475.1| 50S ribosomal protein L3 [Escherichia coli NC101] gi|307140003|ref|ZP_07499359.1| 50S ribosomal protein L3 [Escherichia coli H736] gi|307315101|ref|ZP_07594684.1| 50S ribosomal protein L3 [Escherichia coli W] gi|309785642|ref|ZP_07680273.1| ribosomal L3 family protein [Shigella dysenteriae 1617] gi|309794595|ref|ZP_07689017.1| 50S ribosomal protein L3 [Escherichia coli MS 145-7] gi|312968355|ref|ZP_07782565.1| ribosomal L3 family protein [Escherichia coli 2362-75] gi|312972419|ref|ZP_07786593.1| ribosomal L3 family protein [Escherichia coli 1827-70] gi|331644016|ref|ZP_08345145.1| 50S ribosomal protein L3 [Escherichia coli H736] gi|331649117|ref|ZP_08350203.1| 50S ribosomal protein L3 [Escherichia coli M605] gi|331654913|ref|ZP_08355912.1| 50S ribosomal protein L3 [Escherichia coli M718] gi|331659610|ref|ZP_08360548.1| 50S ribosomal protein L3 [Escherichia coli TA206] gi|331664933|ref|ZP_08365834.1| 50S ribosomal protein L3 [Escherichia coli TA143] gi|331670149|ref|ZP_08370988.1| 50S ribosomal protein L3 [Escherichia coli TA271] gi|331679389|ref|ZP_08380059.1| 50S ribosomal protein L3 [Escherichia coli H591] gi|331684962|ref|ZP_08385548.1| 50S ribosomal protein L3 [Escherichia coli H299] gi|42560216|sp|P60438|RL3_ECOLI RecName: Full=50S ribosomal protein L3 gi|42560217|sp|P60439|RL3_ECOL6 RecName: Full=50S ribosomal protein L3 gi|42560218|sp|P60440|RL3_ECO57 RecName: Full=50S ribosomal protein L3 gi|42560221|sp|P60447|RL3_SHIFL RecName: Full=50S ribosomal protein L3 gi|109893554|sp|Q31VV6|RL3_SHIBS RecName: Full=50S ribosomal protein L3 gi|109893555|sp|Q32B31|RL3_SHIDS RecName: Full=50S ribosomal protein L3 gi|123048781|sp|Q0TCE1|RL3_ECOL5 RecName: Full=50S ribosomal protein L3 gi|123084373|sp|Q1R602|RL3_ECOUT RecName: Full=50S ribosomal protein L3 gi|123342427|sp|Q0SZY3|RL3_SHIF8 RecName: Full=50S ribosomal protein L3 gi|166233140|sp|A1AGK7|RL3_ECOK1 RecName: Full=50S ribosomal protein L3 gi|166990934|sp|A7ZSK9|RL3_ECO24 RecName: Full=50S ribosomal protein L3 gi|166990935|sp|A8A5C5|RL3_ECOHS RecName: Full=50S ribosomal protein L3 gi|189042843|sp|B1IPX9|RL3_ECOLC RecName: Full=50S ribosomal protein L3 gi|226725166|sp|B7MCT5|RL3_ECO45 RecName: Full=50S ribosomal protein L3 gi|226725167|sp|B5YTP1|RL3_ECO5E RecName: Full=50S ribosomal protein L3 gi|226725168|sp|B7NLN9|RL3_ECO7I RecName: Full=50S ribosomal protein L3 gi|226725169|sp|B7M1N4|RL3_ECO8A RecName: Full=50S ribosomal protein L3 gi|226725170|sp|B1X6H1|RL3_ECODH RecName: Full=50S ribosomal protein L3 gi|226725171|sp|B7NDU1|RL3_ECOLU RecName: Full=50S ribosomal protein L3 gi|226725172|sp|B6I234|RL3_ECOSE RecName: Full=50S ribosomal protein L3 gi|226725173|sp|B1LHD4|RL3_ECOSM RecName: Full=50S ribosomal protein L3 gi|226725175|sp|B7LS40|RL3_ESCF3 RecName: Full=50S ribosomal protein L3 gi|226730569|sp|B2U2T8|RL3_SHIB3 RecName: Full=50S ribosomal protein L3 gi|254803671|sp|B7UK44|RL3_ECO27 RecName: Full=50S ribosomal protein L3 gi|254803672|sp|B7L4K9|RL3_ECO55 RecName: Full=50S ribosomal protein L3 gi|254803673|sp|B7N0W0|RL3_ECO81 RecName: Full=50S ribosomal protein L3 gi|259647744|sp|C4ZUH5|RL3_ECOBW RecName: Full=50S ribosomal protein L3 gi|33357903|pdb|1P85|B Chain B, Real Space Refined Coordinates Of The 50s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp State Of E. Coli 70s Ribosome gi|33357931|pdb|1P86|B Chain B, Real Space Refined Coordinates Of The 50s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Initiation-Like State Of E. Coli 70s Ribosome gi|83754065|pdb|2AW4|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|83754121|pdb|2AWB|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|116666574|pdb|1VS6|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|116666626|pdb|1VS8|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|116667436|pdb|2GYA|B Chain B, Structure Of The 50s Subunit Of A Pre-Translocational E. Coli Ribosome Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1056 gi|116667488|pdb|2GYC|B Chain B, Structure Of The 50s Subunit Of A Secm-Stalled E. Coli Ribosome Complex Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1143 gi|118138094|pdb|2I2T|D Chain D, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|118138148|pdb|2I2V|D Chain D, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|119390348|pdb|2J28|D Chain D, Model Of E. Coli Srp Bound To 70s Rncs gi|157836049|pdb|2QOV|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 50s Subunit Of The First 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836101|pdb|2QOX|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836153|pdb|2QOZ|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836205|pdb|2QP1|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|158429724|pdb|2QAM|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429776|pdb|2QAO|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429834|pdb|2QBA|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429886|pdb|2QBC|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429938|pdb|2QBE|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429991|pdb|2QBG|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430044|pdb|2QBI|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Gentamicin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430097|pdb|2QBK|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Gentamicin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158431397|pdb|2Z4L|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Paromomycin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158431450|pdb|2Z4N|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Paromomycin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|168988734|pdb|2VHM|D Chain D, Structure Of Pdf Binding Helix In Complex With The Ribosome (Part 1 Of 4) gi|168988765|pdb|2VHN|D Chain D, Structure Of Pdf Binding Helix In Complex With The Ribosome. (Part 2 Of 4) gi|169404606|pdb|2RDO|D Chain D, 50s Subunit With Ef-G(Gdpnp) And Rrf Bound gi|197107304|pdb|3DF2|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 50s Subunit Of The First 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|197107356|pdb|3DF4|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|209870357|pdb|3BBX|D Chain D, The Hsp15 Protein Fitted Into The Low Resolution Cryo-Em Map 50s.Nc-Trna.Hsp15 Complex gi|224510762|pdb|3FIK|D Chain D, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry Consists Of The 50s Subunit. gi|251837155|pdb|3IY9|C Chain C, Leishmania Tarentolae Mitochondrial Large Ribosomal Subunit Model gi|256032397|pdb|3E1B|Y Chain Y, Structure Of The 50s Subunit Of E. Coli Ribosome In Pre- Accommodation State gi|256032454|pdb|3E1D|Y Chain Y, Structure Of The 50s Subunit Of E. Coli Ribosome In Post- Accommodation State gi|257097345|pdb|3I1N|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097397|pdb|3I1P|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097451|pdb|3I1R|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097505|pdb|3I1T|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097560|pdb|3I20|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097615|pdb|3I22|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|290560335|pdb|3KCR|D Chain D, Ribosome-Secy Complex. This Entry 3kcr Contains 50s Ribosomal Subnit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 3kc4 gi|294662253|pdb|2WWQ|D Chain D, E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. This File Contains The 50s, The P-Site Trna And The Tnac Leader Peptide (Part 2 Of 2). gi|308198358|pdb|1VT2|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|308198732|pdb|3ORB|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 50s Subunit Of The First 70s Ribosome Bound To Cem-101. gi|308388010|pdb|3OFQ|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|308388041|pdb|3OFR|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 50s Subunit Of The First 70s Ribosome With Erthromycin Bound. gi|309320068|pdb|3OFC|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 50s Subunit Of The First 70s Ribosome With Chloramphenicol Bound. gi|309320099|pdb|3OFD|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|309320172|pdb|3OFZ|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 50s Subunit Of The First 70s Ribosome Bound To Clindamycin. gi|309320203|pdb|3OG0|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|315113657|pdb|3OAS|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|315113688|pdb|3OAT|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 50s Subunit Of The First 70s Ribosome With Telithromycin Bound. gi|326634213|pdb|3IZT|E Chain E, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Large Subunit Of A Ribosome Programmed With A Near-Cognate Codon. gi|326634246|pdb|3IZU|E Chain E, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Large Subunit Of A Ribosome Programmed With A Cognate Codon gi|329666019|pdb|3J01|D Chain D, Structure Of The Ribosome-Secye Complex In The Membrane Environment gi|12517952|gb|AAG58441.1|AE005557_10 50S ribosomal subunit protein L3 [Escherichia coli O157:H7 str. EDL933] gi|26110343|gb|AAN82529.1|AE016767_289 50S ribosomal protein L3 [Escherichia coli CFT073] gi|42827|emb|CAA26460.1| unnamed protein product [Escherichia coli] gi|606254|gb|AAA58117.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12 substr. MG1655] gi|1789716|gb|AAC76345.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12 substr. MG1655] gi|13363658|dbj|BAB37608.1| 50S ribosomal subunit protein L3 [Escherichia coli O157:H7 str. Sakai] gi|24053796|gb|AAN44815.1| 50S ribosomal subunit protein L3 [Shigella flexneri 2a str. 301] gi|30043641|gb|AAP19361.1| 50S ribosomal subunit protein L3 [Shigella flexneri 2a str. 2457T] gi|81242764|gb|ABB63474.1| 50S ribosomal subunit protein L3 [Shigella dysenteriae Sd197] gi|81247094|gb|ABB67802.1| 50S ribosomal subunit protein L3 [Shigella boydii Sb227] gi|85676721|dbj|BAE77971.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K12 substr. W3110] gi|91074331|gb|ABE09212.1| 50S ribosomal subunit protein L3 [Escherichia coli UTI89] gi|110345151|gb|ABG71388.1| 50S ribosomal protein L3 [Escherichia coli 536] gi|110616715|gb|ABF05382.1| 50S ribosomal subunit protein L3 [Shigella flexneri 5 str. 8401] gi|115514722|gb|ABJ02797.1| 50S ribosomal subunit protein L3 [Escherichia coli APEC O1] gi|157068474|gb|ABV07729.1| ribosomal protein L3 [Escherichia coli HS] gi|157078636|gb|ABV18344.1| ribosomal protein L3 [Escherichia coli E24377A] gi|169753372|gb|ACA76071.1| ribosomal protein L3 [Escherichia coli ATCC 8739] gi|169890674|gb|ACB04381.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12 substr. DH10B] gi|170518037|gb|ACB16215.1| ribosomal protein L3 [Escherichia coli SMS-3-5] gi|187430669|gb|ACD09943.1| ribosomal protein L3 [Shigella boydii CDC 3083-94] gi|188013518|gb|EDU51640.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4113] gi|188490342|gb|EDU65445.1| ribosomal protein L3 [Escherichia coli 53638] gi|189359274|gb|EDU77693.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4401] gi|189361771|gb|EDU80190.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4486] gi|189374499|gb|EDU92915.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC869] gi|190908143|gb|EDV67734.1| ribosomal protein L3 [Escherichia coli F11] gi|208726287|gb|EDZ75888.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4206] gi|208733387|gb|EDZ82074.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4045] gi|208738455|gb|EDZ86137.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4042] gi|209160382|gb|ACI37815.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4115] gi|209757038|gb|ACI76831.1| 50S ribosomal subunit protein L3 [Escherichia coli] gi|209757040|gb|ACI76832.1| 50S ribosomal subunit protein L3 [Escherichia coli] gi|209757042|gb|ACI76833.1| 50S ribosomal subunit protein L3 [Escherichia coli] gi|209757044|gb|ACI76834.1| 50S ribosomal subunit protein L3 [Escherichia coli] gi|209757046|gb|ACI76835.1| 50S ribosomal subunit protein L3 [Escherichia coli] gi|209914045|dbj|BAG79119.1| 50S ribosomal protein L3 [Escherichia coli SE11] gi|215266692|emb|CAS11131.1| 50S ribosomal subunit protein L3 [Escherichia coli O127:H6 str. E2348/69] gi|217321934|gb|EEC30358.1| ribosomal protein L3 [Escherichia coli O157:H7 str. TW14588] gi|218353744|emb|CAV00038.1| 50S ribosomal subunit protein L3 [Escherichia coli 55989] gi|218358136|emb|CAQ90783.1| 50S ribosomal subunit protein L3 [Escherichia fergusonii ATCC 35469] gi|218362645|emb|CAR00271.1| 50S ribosomal subunit protein L3 [Escherichia coli IAI1] gi|218367150|emb|CAR04924.1| 50S ribosomal subunit protein L3 [Escherichia coli S88] gi|218372068|emb|CAR19928.1| 50S ribosomal subunit protein L3 [Escherichia coli IAI39] gi|218429170|emb|CAR09978.1| 50S ribosomal subunit protein L3 [Escherichia coli ED1a] gi|218434024|emb|CAR14941.1| 50S ribosomal subunit protein L3 [Escherichia coli UMN026] gi|222035029|emb|CAP77772.1| 50S ribosomal protein L3 [Escherichia coli LF82] gi|226838987|gb|EEH71010.1| 50S ribosomal protein L3 [Escherichia sp. 1_1_43] gi|226902314|gb|EEH88573.1| ribosomal protein L3 [Escherichia sp. 3_2_53FAA] gi|227839595|gb|EEJ50061.1| 50S ribosomal protein L3 [Escherichia coli 83972] gi|238859868|gb|ACR61866.1| 50S ribosomal subunit protein L3 [Escherichia coli BW2952] gi|242378847|emb|CAQ33639.1| 50S ribosomal subunit protein L3, subunit of 50S ribosomal subunit and ribosome [Escherichia coli BL21(DE3)] gi|253322900|gb|ACT27502.1| ribosomal protein L3 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975149|gb|ACT40820.1| 50S ribosomal protein L3 [Escherichia coli B str. REL606] gi|253979305|gb|ACT44975.1| 50S ribosomal protein L3 [Escherichia coli BL21(DE3)] gi|254594657|gb|ACT74018.1| 50S ribosomal subunit protein L3 [Escherichia coli O157:H7 str. TW14359] gi|257756090|dbj|BAI27592.1| 50S ribosomal subunit protein L3 [Escherichia coli O26:H11 str. 11368] gi|257761265|dbj|BAI32762.1| 50S ribosomal subunit protein L3 [Escherichia coli O103:H2 str. 12009] gi|257766419|dbj|BAI37914.1| 50S ribosomal subunit protein L3 [Escherichia coli O111:H- str. 11128] gi|260447661|gb|ACX38083.1| ribosomal protein L3 [Escherichia coli DH1] gi|281180355|dbj|BAI56685.1| 50S ribosomal protein L3 [Escherichia coli SE15] gi|281602685|gb|ADA75669.1| 50S ribosomal protein L3 [Shigella flexneri 2002017] gi|290764551|gb|ADD58512.1| 50S ribosomal protein L3 [Escherichia coli O55:H7 str. CB9615] gi|291321764|gb|EFE61195.1| 50S ribosomal protein L3 [Escherichia coli B088] gi|291425728|gb|EFE98762.1| 50S ribosomal protein L3 [Escherichia coli FVEC1412] gi|291431313|gb|EFF04298.1| 50S ribosomal protein L3 [Escherichia coli B185] gi|291468386|gb|EFF10879.1| 50S ribosomal protein L3 [Escherichia coli B354] gi|294489959|gb|ADE88715.1| ribosomal protein L3 [Escherichia coli IHE3034] gi|298276493|gb|EFI18011.1| 50S ribosomal protein L3 [Escherichia coli FVEC1302] gi|299881660|gb|EFI89871.1| 50S ribosomal protein L3 [Escherichia coli MS 196-1] gi|300301917|gb|EFJ58302.1| 50S ribosomal protein L3 [Escherichia coli MS 185-1] gi|300309009|gb|EFJ63529.1| 50S ribosomal protein L3 [Escherichia coli MS 200-1] gi|300318234|gb|EFJ68018.1| 50S ribosomal protein L3 [Escherichia coli MS 175-1] gi|300359499|gb|EFJ75369.1| 50S ribosomal protein L3 [Escherichia coli MS 198-1] gi|300399526|gb|EFJ83064.1| 50S ribosomal protein L3 [Escherichia coli MS 69-1] gi|300404441|gb|EFJ87979.1| 50S ribosomal protein L3 [Escherichia coli MS 84-1] gi|300409402|gb|EFJ92940.1| 50S ribosomal protein L3 [Escherichia coli MS 45-1] gi|300414554|gb|EFJ97864.1| 50S ribosomal protein L3 [Escherichia coli MS 115-1] gi|300421719|gb|EFK05030.1| 50S ribosomal protein L3 [Escherichia coli MS 182-1] gi|300453788|gb|EFK17408.1| 50S ribosomal protein L3 [Escherichia coli MS 116-1] gi|300459474|gb|EFK22967.1| 50S ribosomal protein L3 [Escherichia coli MS 21-1] gi|300460037|gb|EFK23530.1| 50S ribosomal protein L3 [Escherichia coli MS 187-1] gi|300524643|gb|EFK45712.1| 50S ribosomal protein L3 [Escherichia coli MS 119-7] gi|300532362|gb|EFK53424.1| 50S ribosomal protein L3 [Escherichia coli MS 107-1] gi|300839224|gb|EFK66984.1| 50S ribosomal protein L3 [Escherichia coli MS 124-1] gi|300847992|gb|EFK75752.1| 50S ribosomal protein L3 [Escherichia coli MS 78-1] gi|301077763|gb|EFK92569.1| 50S ribosomal protein L3 [Escherichia coli MS 146-1] gi|305850733|gb|EFM51190.1| 50S ribosomal protein L3 [Escherichia coli NC101] gi|306905450|gb|EFN35985.1| 50S ribosomal protein L3 [Escherichia coli W] gi|307555407|gb|ADN48182.1| 50S ribosomal subunit protein L3 [Escherichia coli ABU 83972] gi|308121645|gb|EFO58907.1| 50S ribosomal protein L3 [Escherichia coli MS 145-7] gi|308926762|gb|EFP72238.1| ribosomal L3 family protein [Shigella dysenteriae 1617] gi|309703732|emb|CBJ03073.1| 50S ribosomal subunit protein L3 [Escherichia coli ETEC H10407] gi|310334796|gb|EFQ01001.1| ribosomal L3 family protein [Escherichia coli 1827-70] gi|312287180|gb|EFR15090.1| ribosomal L3 family protein [Escherichia coli 2362-75] gi|312947871|gb|ADR28698.1| 50S ribosomal protein L3 [Escherichia coli O83:H1 str. NRG 857C] gi|313647370|gb|EFS11822.1| ribosomal L3 family protein [Shigella flexneri 2a str. 2457T] gi|315062612|gb|ADT76939.1| 50S ribosomal subunit protein L3 [Escherichia coli W] gi|315137895|dbj|BAJ45054.1| 50S ribosomal protein L3 [Escherichia coli DH1] gi|315255903|gb|EFU35871.1| 50S ribosomal protein L3 [Escherichia coli MS 85-1] gi|315284605|gb|EFU44050.1| 50S ribosomal protein L3 [Escherichia coli MS 110-3] gi|315292363|gb|EFU51715.1| 50S ribosomal protein L3 [Escherichia coli MS 153-1] gi|315298618|gb|EFU57873.1| 50S ribosomal protein L3 [Escherichia coli MS 16-3] gi|315616997|gb|EFU97609.1| ribosomal L3 family protein [Escherichia coli 3431] gi|320173961|gb|EFW49137.1| LSU ribosomal protein L3p (L3e) [Shigella dysenteriae CDC 74-1112] gi|320180154|gb|EFW55093.1| LSU ribosomal protein L3p (L3e) [Shigella boydii ATCC 9905] gi|320187038|gb|EFW61750.1| LSU ribosomal protein L3p (L3e) [Shigella flexneri CDC 796-83] gi|320191649|gb|EFW66299.1| LSU ribosomal protein L3p (L3e) [Escherichia coli O157:H7 str. EC1212] gi|320639625|gb|EFX09219.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 str. G5101] gi|320645123|gb|EFX14139.1| 50S ribosomal protein L3 [Escherichia coli O157:H- str. 493-89] gi|320650434|gb|EFX18900.1| 50S ribosomal protein L3 [Escherichia coli O157:H- str. H 2687] gi|320655959|gb|EFX23879.1| 50S ribosomal protein L3 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661411|gb|EFX28826.1| 50S ribosomal protein L3 [Escherichia coli O55:H7 str. USDA 5905] gi|320666433|gb|EFX33416.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 str. LSU-61] gi|323154158|gb|EFZ40361.1| ribosomal L3 family protein [Escherichia coli EPECa14] gi|323162999|gb|EFZ48834.1| ribosomal protein L3 family protein [Escherichia coli E128010] gi|323179144|gb|EFZ64718.1| ribosomal protein L3 family protein [Escherichia coli 1180] gi|323182798|gb|EFZ68199.1| ribosomal protein L3 family protein [Escherichia coli 1357] gi|323189075|gb|EFZ74359.1| ribosomal protein L3 family protein [Escherichia coli RN587/1] gi|323376801|gb|ADX49069.1| 50S ribosomal protein L3 [Escherichia coli KO11] gi|323934482|gb|EGB30890.1| 50S ribosomal protein L3 [Escherichia coli E1520] gi|323939258|gb|EGB35470.1| 50S ribosomal protein L3 [Escherichia coli E482] gi|323944259|gb|EGB40335.1| 50S ribosomal protein L3 [Escherichia coli H120] gi|323950234|gb|EGB46116.1| 50S ribosomal protein L3 [Escherichia coli H252] gi|323954557|gb|EGB50340.1| 50S ribosomal protein L3 [Escherichia coli H263] gi|323959529|gb|EGB55182.1| 50S ribosomal protein L3 [Escherichia coli H489] gi|323970124|gb|EGB65398.1| 50S ribosomal protein L3 [Escherichia coli TA007] gi|323974727|gb|EGB69840.1| 50S ribosomal protein L3 [Escherichia coli TW10509] gi|324009011|gb|EGB78230.1| 50S ribosomal protein L3 [Escherichia coli MS 57-2] gi|324014936|gb|EGB84155.1| 50S ribosomal protein L3 [Escherichia coli MS 60-1] gi|324017862|gb|EGB87081.1| 50S ribosomal protein L3 [Escherichia coli MS 117-3] gi|324111999|gb|EGC05978.1| 50S ribosomal protein L3 [Escherichia fergusonii B253] gi|324116290|gb|EGC10210.1| 50S ribosomal protein L3 [Escherichia coli E1167] gi|325498885|gb|EGC96744.1| 50S ribosomal protein L3 [Escherichia fergusonii ECD227] gi|326344552|gb|EGD68301.1| LSU ribosomal protein L3p (L3e) [Escherichia coli O157:H7 str. 1125] gi|327250968|gb|EGE62661.1| ribosomal protein L3 family protein [Escherichia coli STEC_7v] gi|330909362|gb|EGH37876.1| LSU ribosomal protein L3p (L3e) [Escherichia coli AA86] gi|331036310|gb|EGI08536.1| 50S ribosomal protein L3 [Escherichia coli H736] gi|331041615|gb|EGI13759.1| 50S ribosomal protein L3 [Escherichia coli M605] gi|331046928|gb|EGI19006.1| 50S ribosomal protein L3 [Escherichia coli M718] gi|331052825|gb|EGI24858.1| 50S ribosomal protein L3 [Escherichia coli TA206] gi|331057443|gb|EGI29429.1| 50S ribosomal protein L3 [Escherichia coli TA143] gi|331062211|gb|EGI34131.1| 50S ribosomal protein L3 [Escherichia coli TA271] gi|331072561|gb|EGI43886.1| 50S ribosomal protein L3 [Escherichia coli H591] gi|331077333|gb|EGI48545.1| 50S ribosomal protein L3 [Escherichia coli H299] gi|332085471|gb|EGI90637.1| ribosomal protein L3 family protein [Shigella boydii 5216-82] gi|332086009|gb|EGI91173.1| ribosomal protein L3 family protein [Shigella dysenteriae 155-74] gi|332090310|gb|EGI95408.1| ribosomal protein L3 family protein [Shigella boydii 3594-74] gi|332104227|gb|EGJ07573.1| 50S ribosomal subunit protein L3 [Shigella sp. D9] gi|223116|prf||0509226A protein L3 Length = 209 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 93/202 (46%), Positives = 128/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|285017320|ref|YP_003375031.1| 50s ribosomal protein l3 [Xanthomonas albilineans GPE PC73] gi|283472538|emb|CBA15043.1| probable 50s ribosomal protein l3 [Xanthomonas albilineans] Length = 216 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 97/211 (45%), Positives = 130/211 (61%), Gaps = 4/211 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G V RK GM+ V+ +GR IPVT++ ++ +T++ +GY AVQ+ G +V V+K Sbjct: 8 GFVGRKAGMSRVFTEDGRSIPVTLIEATPNRITQLKTVENDGYSAVQITVGTRRVALVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 P G F+ V + L+EFRV+ D L +G F VGQ VDV G+T GKGF Sbjct: 68 PAAGHFAKAKVEAGRGLWEFRVE-DAQLGDFAIGGEIKVDIFAVGQKVDVQGVTKGKGFQ 126 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNF ATHG S+SHR GS G RQ PGRVF KKM+G MG + + +NLEVV Sbjct: 127 GTIKRHNFRMGDATHGNSLSHRVGGSLGQRQTPGRVFLGKKMSGHMGAVQQSTQNLEVVK 186 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +RGLI ++G VPGA ++VR + K+ Sbjct: 187 VDVERGLIAIRGAVPGAAGGD-VIVRPASKA 216 >gi|311693271|gb|ADP96144.1| 50S ribosomal protein L3 [marine bacterium HP15] Length = 212 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 90/199 (45%), Positives = 126/199 (63%), Gaps = 1/199 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ +G+ +PVTV+ ++ ++ +TL+ +GY AVQV G + Sbjct: 1 MAIGVVGRKAGMTRIFTEDGQALPVTVIEVEPNRITQLKTLESDGYRAVQVTVGTRRSSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + ++EFR+ + + L G + S F GQ+VD G + GKG Sbjct: 61 VTKSEAGHFAKAGVEAGRGMWEFRLADGEGEDLAAGGEITASVFEDGQVVDAIGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG+MG +VTV+NL++ Sbjct: 121 FQGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQMGNAQVTVQNLKI 180 Query: 180 VSVDDKRGLILVKGCVPGA 198 V VD +R L+LV G VPGA Sbjct: 181 VRVDAERNLLLVSGAVPGA 199 >gi|253998014|ref|YP_003050077.1| 50S ribosomal protein L3 [Methylovorus sp. SIP3-4] gi|313200081|ref|YP_004038739.1| 50S ribosomal protein L3 [Methylovorus sp. MP688] gi|253984693|gb|ACT49550.1| ribosomal protein L3 [Methylovorus sp. SIP3-4] gi|312439397|gb|ADQ83503.1| ribosomal protein L3 [Methylovorus sp. MP688] Length = 214 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ EG IPVTVL + +V +T +GY +QV GE + Sbjct: 1 MSLGLIGRKVGMTRVFTDEGESIPVTVLEVVPNRVTQVKTPSSDGYAGLQVAHGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K + G ++ V+ + EF V +D VG + F GQ VDVTG+++GKG Sbjct: 61 VTKALAGHYAKAGVAAGSGIKEFAVAEDVLANYAVGGQITVELFQAGQYVDVTGVSLGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+GA+KRHNF RA+HG S SH GS G QDPGRVF K+M G +G + TV+NL++ Sbjct: 121 FAGAIKRHNFSSNRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMPGHLGAVKTTVQNLQI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+L+KG VPG+K ++VR + K+ Sbjct: 181 VRVDAERNLLLIKGAVPGSKGGD-VVVRPAVKA 212 >gi|304399291|ref|ZP_07381157.1| 50S ribosomal protein L3 [Pantoea sp. aB] gi|308188357|ref|YP_003932488.1| 50S ribosomal protein L3 [Pantoea vagans C9-1] gi|304353217|gb|EFM17598.1| 50S ribosomal protein L3 [Pantoea sp. aB] gi|308058867|gb|ADO11039.1| 50S ribosomal protein L3 [Pantoea vagans C9-1] Length = 209 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 92/202 (45%), Positives = 128/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L+ +GY A+QV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKGLENDGYQAIQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR + ++ VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRTAEGEEY-SVGQSISVEIFAEVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|329938232|ref|ZP_08287683.1| 50S ribosomal protein L3 [Streptomyces griseoaurantiacus M045] gi|329302721|gb|EGG46611.1| 50S ribosomal protein L3 [Streptomyces griseoaurantiacus M045] Length = 214 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 95/210 (45%), Positives = 127/210 (60%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ G+ + V+K Sbjct: 7 GILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDADGYESVQIAFGDIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 67 PLKGHFAKADVTPRRHLVEIRTA-DAAEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +VD Sbjct: 126 MKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+KG VPG +LVR + K A Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214 >gi|74313839|ref|YP_312258.1| 50S ribosomal protein L3 [Shigella sonnei Ss046] gi|109893556|sp|Q3YWT9|RL3_SHISS RecName: Full=50S ribosomal protein L3 gi|73857316|gb|AAZ90023.1| 50S ribosomal subunit protein L3 [Shigella sonnei Ss046] Length = 209 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 93/202 (46%), Positives = 127/202 (62%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V+K Sbjct: 3 GLVGKKAGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFAEVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|328951236|ref|YP_004368571.1| 50S ribosomal protein L3 [Marinithermus hydrothermalis DSM 14884] gi|328451560|gb|AEB12461.1| 50S ribosomal protein L3 [Marinithermus hydrothermalis DSM 14884] Length = 206 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 98/210 (46%), Positives = 128/210 (60%), Gaps = 7/210 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ K+GMT ++ + R IPVTV+ C VV RT++K+GY AVQ+G K + V+K Sbjct: 3 GILGAKIGMTQIWK-DDRAIPVTVILAGPCPVVQRRTVEKDGYEAVQLGFLPQKPQRVNK 61 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 PM+G F V P + L E R P G V + S F G+ VDVTG++ G+GF+G Sbjct: 62 PMKGHFEKAGVEPVRYLREIR-----GFNPEGDVVTVSIFQPGERVDVTGISKGRGFTGV 116 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR F G +HG HR GS G R+ PGRV+K KKMAGR G RVTV+NLEVV V Sbjct: 117 MKRWGFAGGPDSHGAHRIHRHPGSIGQRKTPGRVYKGKKMAGRYGAERVTVQNLEVVDVI 176 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + LILVKG VPG +++R+S K A Sbjct: 177 AEENLILVKGAVPGP-NGGLVILRESVKGA 205 >gi|307628355|gb|ADN72659.1| 50S ribosomal protein L3 [Escherichia coli UM146] Length = 209 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 92/202 (45%), Positives = 128/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+V+ VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVIRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|261346935|ref|ZP_05974579.1| 50S ribosomal protein L3 [Providencia rustigianii DSM 4541] gi|282565000|gb|EFB70535.1| 50S ribosomal protein L3 [Providencia rustigianii DSM 4541] Length = 209 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 92/202 (45%), Positives = 128/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++N +V +T + +GY A+QV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKTAETDGYNAIQVTTGSKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L EFR ++ + G S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRILREFRTEEGTEF-KAGESISVEIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA ++ I+ Sbjct: 182 AERNLLLVKGAVPGATGSNLIV 203 >gi|219681870|ref|YP_002468256.1| 50S ribosomal protein L3 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682425|ref|YP_002468809.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471575|ref|ZP_05635574.1| 50S ribosomal protein L3 [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|254803660|sp|B8D9U7|RL3_BUCA5 RecName: Full=50S ribosomal protein L3 gi|254803661|sp|B8D849|RL3_BUCAT RecName: Full=50S ribosomal protein L3 gi|219622158|gb|ACL30314.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624713|gb|ACL30868.1| 50S ribosomal protein L3 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311086246|gb|ADP66328.1| 50S ribosomal protein L3 [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086823|gb|ADP66904.1| 50S ribosomal protein L3 [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087410|gb|ADP67490.1| 50S ribosomal protein L3 [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087905|gb|ADP67984.1| 50S ribosomal protein L3 [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 209 Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 88/195 (45%), Positives = 127/195 (65%), Gaps = 1/195 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ EG IPVTV+ L ++ + ++ + Y A+QV G K ++K Sbjct: 3 GLVGKKIGMTRIFTEEGTSIPVTVIELKENRITQVKNINTDLYCAIQVTTGIKKSNRLNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P + L+EFR K+++ +G + + F + VD+TG++ GKGFSG Sbjct: 63 PQSGHFLKSGVTPGRGLWEFRTDKNNNF-KIGQSITINIFNNVKKVDITGISKGKGFSGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG++G RVTV++L +V +D Sbjct: 122 VKRWNFHTQDATHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGQLGNTRVTVQSLNIVRID 181 Query: 184 DKRGLILVKGCVPGA 198 ++R L+LVKG VPGA Sbjct: 182 ERRNLLLVKGAVPGA 196 >gi|293393311|ref|ZP_06637625.1| 50S ribosomal protein L3 [Serratia odorifera DSM 4582] gi|291424221|gb|EFE97436.1| 50S ribosomal protein L3 [Serratia odorifera DSM 4582] Length = 209 Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 92/202 (45%), Positives = 127/202 (62%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + LD +GY A+QV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLDNDGYRAIQVTTGSKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+++ + G S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLEEGQEF-AAGQEISVEIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG +G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGGNLIV 203 >gi|323144964|ref|ZP_08079524.1| 50S ribosomal protein L3 [Succinatimonas hippei YIT 12066] gi|322415243|gb|EFY06017.1| 50S ribosomal protein L3 [Succinatimonas hippei YIT 12066] Length = 212 Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 97/213 (45%), Positives = 134/213 (62%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RKLGMT V+N +G+ +PVTV+ ++ +V + ++ +GY A+QV GE K Sbjct: 1 MSIGLIGRKLGMTRVFNQDGKSVPVTVIQVEANRVTQIKNIETDGYCAIQVTTGERKTSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++K G F+ V+ + L+EFR++ + + VGS F + VDVTG + GKG Sbjct: 61 MTKAEIGHFAKTGVAAGRGLWEFRLEPSELEAYQVGSEIKVDAFKDVKKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 +G +KR+NF THG S SHR GSTG Q PGRVFK KKM GRMG RVTV L++ Sbjct: 121 TAGTVKRYNFRTQDFTHGNSRSHRVPGSTGQNQTPGRVFKGKKMVGRMGNERVTVMCLDL 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LVKG VPGA N ++VR S K+ Sbjct: 181 VRVDSERNLLLVKGAVPGA-NNGDLIVRPSVKA 212 >gi|88812757|ref|ZP_01128003.1| 50S ribosomal protein L3 [Nitrococcus mobilis Nb-231] gi|88789995|gb|EAR21116.1| 50S ribosomal protein L3 [Nitrococcus mobilis Nb-231] Length = 219 Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 97/219 (44%), Positives = 134/219 (61%), Gaps = 14/219 (6%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ +G +PVTV+ ++ HR DK+GY A+QV G + Sbjct: 1 MAIGIVGRKCGMTRLFAEDGTSVPVTVVEAAPNRITQHRREDKDGYSAIQVTTGTRRPAR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQK-------DDDLLPVGSVFSPSYFTVGQLVDVTG 113 V+KP G + V V + L+EFR+ + D++ L V F VGQ VDVT Sbjct: 61 VNKPQAGHVAKVGVEMGRGLWEFRLPRGVETESSDNNELRV------DQFVVGQRVDVTS 114 Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 T GKGF+G +KRH+F ATHG S+SHR+ GS G QDPGRVFK K MAG +G R T Sbjct: 115 RTKGKGFAGTVKRHHFRTQDATHGNSLSHRAPGSIGQNQDPGRVFKGKAMAGHLGAVRRT 174 Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V+NLE+V VD +R L+++KG VPG+ + ++VR + K+ Sbjct: 175 VQNLEIVRVDTERNLLIIKGAVPGS-PGADVVVRPAIKT 212 >gi|149376686|ref|ZP_01894445.1| 50S ribosomal protein L3 [Marinobacter algicola DG893] gi|149359059|gb|EDM47524.1| 50S ribosomal protein L3 [Marinobacter algicola DG893] Length = 212 Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 88/199 (44%), Positives = 127/199 (63%), Gaps = 1/199 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ +G+ + VTV+ ++ ++ +TL+ +GY AVQV G+ + Sbjct: 1 MAIGIVGRKAGMTRIFTEDGQAVSVTVIEVEPNRITQLKTLESDGYRAVQVTVGKRRSSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G ++ V + L+EFR+ + + L G + S F GQ+VD G + GKG Sbjct: 61 VTKSEAGHYAKAGVEAGRGLWEFRLADGEGEELAAGGEITASIFEDGQVVDAVGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG+MG +VTV+NL+V Sbjct: 121 FQGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQMGNAQVTVQNLQV 180 Query: 180 VSVDDKRGLILVKGCVPGA 198 V VD +R L+L++G VPGA Sbjct: 181 VRVDAERNLLLIRGAVPGA 199 >gi|152980599|ref|YP_001355101.1| large subunit ribosomal protein L3 [Janthinobacterium sp. Marseille] gi|212288401|sp|A6T3K4|RL3_JANMA RecName: Full=50S ribosomal protein L3 gi|151280676|gb|ABR89086.1| large subunit ribosomal protein L3 [Janthinobacterium sp. Marseille] Length = 224 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 97/209 (46%), Positives = 126/209 (60%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G IPVTVL + N +V +T + +GY AVQV G + V+K Sbjct: 10 GLLGRKVGMMRIFTDDGDSIPVTVLDVSNNRVTQIKTSEVDGYSAVQVAFGSRRASRVNK 69 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 G F+ V L EFRV L VG V + S F VGQ VDV G+TIGKG++G Sbjct: 70 ASAGHFAKAGVEAGTVLKEFRVAATAASELKVGDVIAASLFEVGQKVDVQGVTIGKGYAG 129 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR+NFG RATHG S SH GS G QDPGRVF K+M G +G T +NLE+ + Sbjct: 130 VIKRYNFGSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTRTTQNLEIARI 189 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D R L+LVKG VPGA KN ++V + K Sbjct: 190 DADRQLLLVKGAVPGA-KNGQVIVSPAVK 217 >gi|329298533|ref|ZP_08255869.1| 50S ribosomal protein L3 [Plautia stali symbiont] Length = 208 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 92/195 (47%), Positives = 123/195 (63%), Gaps = 2/195 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ EG IPVTV+ ++ +V + L+ +GY A+QV G K V K Sbjct: 3 GLVGKKVGMTRIFTEEGVSIPVTVIEVEANRVTQVKGLENDGYQAIQVTTGAKKANRVGK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR + ++ VG S F + VDVTG + GKGF G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRTEGEE--YSVGQSISVEIFADVKKVDVTGTSKGKGFVGT 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++LE+V VD Sbjct: 121 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLEIVRVD 180 Query: 184 DKRGLILVKGCVPGA 198 +R L+LVKG VPGA Sbjct: 181 AERNLLLVKGAVPGA 195 >gi|109896798|ref|YP_660053.1| ribosomal protein L3 [Pseudoalteromonas atlantica T6c] gi|123171764|sp|Q15YN9|RL3_PSEA6 RecName: Full=50S ribosomal protein L3 gi|109699079|gb|ABG38999.1| LSU ribosomal protein L3P [Pseudoalteromonas atlantica T6c] Length = 212 Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 91/199 (45%), Positives = 128/199 (64%), Gaps = 1/199 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G IPVTV+ +V RT + +GY A+QV AG+ K Sbjct: 1 MAIGLIGRKVGMTRIFTEDGVSIPVTVIEATPNRVTQLRTDETDGYTALQVTAGDKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L+EFR+ ++ + + VGS + F ++VDV G + GKG Sbjct: 61 VNKAAAGHFAKAGVEAGRGLWEFRLDGNEGEGIEVGSEITVEIFAETKMVDVAGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F GA+KR NF R +HG S+SHR+ GS G Q PG+VFK KKMAG+MG RVTV++L+V Sbjct: 121 FQGAIKRWNFSHQRNSHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNKRVTVQSLDV 180 Query: 180 VSVDDKRGLILVKGCVPGA 198 V VD + L+LV+G VPGA Sbjct: 181 VRVDAENNLLLVRGNVPGA 199 >gi|311896570|dbj|BAJ28978.1| putative ribosomal protein L3 [Kitasatospora setae KM-6054] Length = 215 Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 95/209 (45%), Positives = 124/209 (59%), Gaps = 3/209 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ R +PVTV+ N VH GY AVQ+G GE + V+ Sbjct: 7 GILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVHTADSPAGYDAVQIGFGEIDPRKVN 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F+ V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 67 KPLQGHFAKAGVTPRRHLVELRT-ADASEYTLGQEITAELFEAGVKVDVTGTSKGKGFAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V Sbjct: 126 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGHERVTTQNLTVHAV 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D ++GL+L+KG +PG +LVR + K Sbjct: 186 DAEKGLLLIKGAIPGP-NGGLVLVRTAAK 213 >gi|72163045|ref|YP_290702.1| 50S ribosomal protein L3 [Thermobifida fusca YX] gi|109893568|sp|Q47LJ3|RL3_THEFY RecName: Full=50S ribosomal protein L3 gi|71916777|gb|AAZ56679.1| LSU ribosomal protein L3P [Thermobifida fusca YX] Length = 216 Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 96/208 (46%), Positives = 125/208 (60%), Gaps = 2/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ KLGMT V++ G+ +PVTVL V RT + +GY A+Q+G G + V+K Sbjct: 8 GVLGEKLGMTQVFDESGKVVPVTVLKAGPAVVTRVRTPETDGYSAIQLGYGHINPRKVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ + N++P++ E R D VG + F G+ VDVTG T GKG++G Sbjct: 68 PLGDYLRKHNLTPRRHYVEVRTS-DASEYTVGQEITADVFQPGEKVDVTGKTKGKGYAGV 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH FGGL A+HG HRS GS G PGRVFK +MAGRMG R TV+NL V SVD Sbjct: 127 MKRHGFGGLGASHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNVRRTVQNLTVHSVD 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 ++GL+LVKG VPG +LVR + K Sbjct: 187 AEKGLLLVKGAVPGP-NGGLVLVRTAVK 213 >gi|145225625|ref|YP_001136303.1| 50S ribosomal protein L3 [Mycobacterium gilvum PYR-GCK] gi|315445978|ref|YP_004078857.1| 50S ribosomal protein L3P [Mycobacterium sp. Spyr1] gi|189042852|sp|A4T1U2|RL3_MYCGI RecName: Full=50S ribosomal protein L3 gi|145218111|gb|ABP47515.1| LSU ribosomal protein L3P [Mycobacterium gilvum PYR-GCK] gi|315264281|gb|ADU01023.1| LSU ribosomal protein L3P [Mycobacterium sp. Spyr1] Length = 218 Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 90/213 (42%), Positives = 130/213 (61%), Gaps = 4/213 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ + +PVTV+ V RT +++GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTTERDGYSAVQLAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD---LLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 +KP+ G F++ V+P++ L E R+ ++D L VG + F G VDVTG + GK Sbjct: 63 NKPVTGQFAAAGVNPRRHLAELRLADNEDAGALYEVGQELTAEIFADGAYVDVTGTSKGK 122 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF+G MKRH F G A+HG HR GS G PGRVFK +M+GRMG +RVT +NL+ Sbjct: 123 GFAGTMKRHGFKGQGASHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGSDRVTTQNLK 182 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD + G++L+KG +PG + ++VR + K Sbjct: 183 VHKVDAENGVLLIKGAIPG-RNGGLVVVRSAIK 214 >gi|253991688|ref|YP_003043044.1| 50S ribosomal protein L3 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253783138|emb|CAQ86303.1| 50s ribosomal protein l3 [Photorhabdus asymbiotica] Length = 209 Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 92/202 (45%), Positives = 130/202 (64%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++N +V + L+ +GY A+QV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKDLNNDGYRAIQVTTGSKKASRVNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRILREFRLSEGEEY-AVGQSISVEIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF A+HG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDASHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA ++ I+ Sbjct: 182 AERNLLLVKGAVPGATGSNLIV 203 >gi|226942778|ref|YP_002797851.1| 50S ribosomal protein L3 [Azotobacter vinelandii DJ] gi|226717705|gb|ACO76876.1| 50S ribosomal protein L3 [Azotobacter vinelandii DJ] Length = 200 Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 89/201 (44%), Positives = 128/201 (63%), Gaps = 3/201 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++ EG +PVTV+ ++ +V + + +GY+AVQV GE + V+K G F+ Sbjct: 1 MTRIFTEEGVSVPVTVIEIEPNRVTQFKNAESDGYLAVQVTVGERRASRVTKAQAGHFAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 NV+ + ++EFR+++ + G + F GQLVDVTG + GKG++G +KR NF G Sbjct: 61 ANVAAGRGVWEFRLEEGE--YQSGDQITVEIFQAGQLVDVTGQSKGKGYAGTIKRWNFRG 118 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 THG S+SHR GS G Q PGRVFK KKM+G +G RVTV++LEVV VD +R L+LV Sbjct: 119 QDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHLGAERVTVQSLEVVRVDSERNLLLV 178 Query: 192 KGCVPGAKKNSWILVRDSFKS 212 KG +PGA ++VR + K+ Sbjct: 179 KGAIPGATGGD-VIVRPAAKA 198 >gi|325981805|ref|YP_004294207.1| 50S ribosomal protein L3 [Nitrosomonas sp. AL212] gi|325531324|gb|ADZ26045.1| 50S ribosomal protein L3 [Nitrosomonas sp. AL212] Length = 215 Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 91/214 (42%), Positives = 131/214 (61%), Gaps = 5/214 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GM ++ G PVTV+ + + ++ + NGY A QV G+ K+ Sbjct: 1 MSLGLIGRKIGMMRIFTENGDAFPVTVIDVASNRITQIKKTSSNGYCAAQVSFGQKKISR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPV---GSVFSPSYFTVGQLVDVTGMTIG 117 V+KP G + V + EFRV KDD +L G F VGQ VD++G+TIG Sbjct: 61 VNKPTAGHCAKAGVIAGSIIREFRV-KDDSILSSFQNGMEIKSDIFKVGQKVDISGITIG 119 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGFSGA+K HNF RA+HG S +H+ GS G QDPGR+F K+MA MG + T++NL Sbjct: 120 KGFSGAIKLHNFSSNRASHGNSKAHKKTGSIGMAQDPGRIFPGKRMAAHMGNVKRTIQNL 179 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 E++ +D +R L+LVKG +PG+ K+ +++VR S K Sbjct: 180 EILRIDSERNLLLVKGAIPGS-KDGYVVVRSSVK 212 >gi|294142933|ref|YP_003558911.1| 50S ribosomal protein L3 [Shewanella violacea DSS12] gi|293329402|dbj|BAJ04133.1| ribosomal protein L3 [Shewanella violacea DSS12] Length = 212 Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 90/206 (43%), Positives = 128/206 (62%), Gaps = 1/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G +PVTV+ + + +V +TL+ +GY A+QV G K Sbjct: 1 MAIGLIGRKVGMTRIFCEDGVSVPVTVIEITSNRVTQVKTLETDGYRALQVTTGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G F+ V + L+E R+ D+ + + VG+ + F VDVTG + GKG Sbjct: 61 ITKPEAGHFAKAGVEAGRGLWEVRLANDEGEGIEVGAELNVDIFADIAKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF THG S++HRS+GS G Q PGRVFK KKM+G MG RVT +NL V Sbjct: 121 FQGGIKRWNFHAQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLNV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205 + VD +R L+LVKG VPGA + I+ Sbjct: 181 IRVDAERNLLLVKGAVPGAINGNLII 206 >gi|325921481|ref|ZP_08183336.1| LSU ribosomal protein L3P [Xanthomonas gardneri ATCC 19865] gi|325548028|gb|EGD19027.1| LSU ribosomal protein L3P [Xanthomonas gardneri ATCC 19865] Length = 216 Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 95/211 (45%), Positives = 130/211 (61%), Gaps = 4/211 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G V RK GM+ V+ +GR +PVT++ ++ +T++ +GY AVQ+ G + V+K Sbjct: 8 GFVGRKAGMSRVFTEDGRSVPVTLIEATPNRIAQIKTVEADGYSAVQITVGARRAALVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 P G F+ V + L+EFRV+ D L VG F VGQ VDV G+T GKGF Sbjct: 68 PAAGHFAKAKVEAGRGLWEFRVE-DAQLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQ 126 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR+NF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + + +NLEVV Sbjct: 127 GTIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVK 186 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +RGLI ++G VPGA ++VR + K+ Sbjct: 187 VDVERGLIAIRGAVPGAAGGD-VIVRPASKA 216 >gi|311277725|ref|YP_003939956.1| 50S ribosomal protein L3 [Enterobacter cloacae SCF1] gi|308746920|gb|ADO46672.1| 50S ribosomal protein L3 [Enterobacter cloacae SCF1] Length = 209 Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 91/202 (45%), Positives = 128/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V+K Sbjct: 3 GLIGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFAEVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|303240971|ref|ZP_07327482.1| 50S ribosomal protein L3 [Acetivibrio cellulolyticus CD2] gi|302591557|gb|EFL61294.1| 50S ribosomal protein L3 [Acetivibrio cellulolyticus CD2] Length = 212 Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 92/212 (43%), Positives = 131/212 (61%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ K+GMT ++N G IPVTV+ C V+ +T++ +GY AV+VG +A K Sbjct: 1 MKKFILGTKIGMTQIFNEAGLAIPVTVIQAGPCTVIQKKTVETDGYGAVKVGFADANEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G FS + V+PKK + EFR D + F G+ +DVTG++ GKGF Sbjct: 61 LNKPQKGQFSKLKVAPKKYIREFRADDFDKYEAGQEIKVADMFENGEKIDVTGISKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRH THG S+ HR GS G P RVFK KK+ G MG RVTV+NL++V Sbjct: 121 AGVMKRHGHKTGPLTHG-SMYHRRVGSMGANTSPARVFKGKKLPGHMGVERVTVQNLDIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA K ++++++ KS Sbjct: 180 RVDAERNLLLVKGAVPGA-KGGLVIIKNTVKS 210 >gi|320540609|ref|ZP_08040259.1| 50S ribosomal subunit protein L3 [Serratia symbiotica str. Tucson] gi|320029540|gb|EFW11569.1| 50S ribosomal subunit protein L3 [Serratia symbiotica str. Tucson] Length = 209 Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 92/202 (45%), Positives = 127/202 (62%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + LD +GY A+QV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKGLDTDGYRAIQVTTGSKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+++ + G S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLEEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG +G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGGNLIV 203 >gi|253581392|ref|ZP_04858618.1| ribosomal protein L3 [Fusobacterium varium ATCC 27725] gi|251836756|gb|EES65290.1| ribosomal protein L3 [Fusobacterium varium ATCC 27725] Length = 213 Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 92/209 (44%), Positives = 135/209 (64%), Gaps = 3/209 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++A+K+GMT ++ +G+ IPVTV+ V+ +T++ +GY A+Q+G E K KN + Sbjct: 7 SGILAKKIGMTQIFE-DGKFIPVTVVEAGPNYVLQKKTVENDGYTALQLGFDEKKEKNTT 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F V+P++ + E RV + +G + VD+TG + GKG +G Sbjct: 66 KPIMGIFKKAGVNPQRFVKELRVDSVEGF-ELGQEIKADVLAEVEYVDITGTSKGKGTAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNFGG RA+HGVS +HR GS G PG+V K K+MAG+ G VTV+NL+VV V Sbjct: 125 VMKRHNFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQYGNATVTVQNLKVVKV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D + L+L+KG VPG+ KNS+I+V+ + K Sbjct: 185 DVENNLLLIKGAVPGS-KNSYIVVKPAVK 212 >gi|22127860|ref|NP_671283.1| 50S ribosomal protein L3 [Yersinia pestis KIM 10] gi|45440067|ref|NP_991606.1| 50S ribosomal protein L3 [Yersinia pestis biovar Microtus str. 91001] gi|51597988|ref|YP_072179.1| 50S ribosomal protein L3 [Yersinia pseudotuberculosis IP 32953] gi|108809254|ref|YP_653170.1| 50S ribosomal protein L3 [Yersinia pestis Antiqua] gi|108814019|ref|YP_649786.1| 50S ribosomal protein L3 [Yersinia pestis Nepal516] gi|145597452|ref|YP_001161527.1| 50S ribosomal protein L3 [Yersinia pestis Pestoides F] gi|150260743|ref|ZP_01917471.1| 50S ribosomal protein L3 [Yersinia pestis CA88-4125] gi|153948634|ref|YP_001402863.1| 50S ribosomal protein L3 [Yersinia pseudotuberculosis IP 31758] gi|162419265|ref|YP_001605175.1| 50S ribosomal protein L3 [Yersinia pestis Angola] gi|165927910|ref|ZP_02223742.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str. F1991016] gi|165939998|ref|ZP_02228534.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str. IP275] gi|166010464|ref|ZP_02231362.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str. E1979001] gi|166213230|ref|ZP_02239265.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str. B42003004] gi|167398599|ref|ZP_02304123.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167418747|ref|ZP_02310500.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425639|ref|ZP_02317392.1| ribosomal protein L3 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170022544|ref|YP_001719049.1| 50S ribosomal protein L3 [Yersinia pseudotuberculosis YPIII] gi|186897184|ref|YP_001874296.1| 50S ribosomal protein L3 [Yersinia pseudotuberculosis PB1/+] gi|218927415|ref|YP_002345290.1| 50S ribosomal protein L3 [Yersinia pestis CO92] gi|229836309|ref|ZP_04456476.1| 50S ribosomal subunit protein L3 [Yersinia pestis Pestoides A] gi|229840067|ref|ZP_04460226.1| 50S ribosomal subunit protein L3 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842149|ref|ZP_04462304.1| 50S ribosomal subunit protein L3 [Yersinia pestis biovar Orientalis str. India 195] gi|229904551|ref|ZP_04519662.1| 50S ribosomal subunit protein L3 [Yersinia pestis Nepal516] gi|270488233|ref|ZP_06205307.1| 50S ribosomal protein L3 [Yersinia pestis KIM D27] gi|294502289|ref|YP_003566351.1| 50S ribosomal protein L3 [Yersinia pestis Z176003] gi|42559671|sp|Q8ZJA9|RL3_YERPE RecName: Full=50S ribosomal protein L3 gi|55977743|sp|P11252|RL3_YERPS RecName: Full=50S ribosomal protein L3 gi|123073062|sp|Q1CCU4|RL3_YERPN RecName: Full=50S ribosomal protein L3 gi|123245521|sp|Q1C2U7|RL3_YERPA RecName: Full=50S ribosomal protein L3 gi|166234609|sp|A4TGZ2|RL3_YERPP RecName: Full=50S ribosomal protein L3 gi|166990943|sp|A7FNN5|RL3_YERP3 RecName: Full=50S ribosomal protein L3 gi|226730592|sp|B2K5N0|RL3_YERPB RecName: Full=50S ribosomal protein L3 gi|226730593|sp|A9R8Z6|RL3_YERPG RecName: Full=50S ribosomal protein L3 gi|226730594|sp|B1JIW1|RL3_YERPY RecName: Full=50S ribosomal protein L3 gi|21960995|gb|AAM87534.1|AE014002_7 50S ribosomal subunit protein L3 [Yersinia pestis KIM 10] gi|45434922|gb|AAS60483.1| 50S ribosomal protein L3 [Yersinia pestis biovar Microtus str. 91001] gi|51591270|emb|CAH22936.1| 50S ribosomal protein L3 [Yersinia pseudotuberculosis IP 32953] gi|108777667|gb|ABG20186.1| LSU ribosomal protein L3P [Yersinia pestis Nepal516] gi|108781167|gb|ABG15225.1| LSU ribosomal protein L3P [Yersinia pestis Antiqua] gi|115346026|emb|CAL18892.1| 50S ribosomal protein L3 [Yersinia pestis CO92] gi|145209148|gb|ABP38555.1| LSU ribosomal protein L3P [Yersinia pestis Pestoides F] gi|149290151|gb|EDM40228.1| 50S ribosomal protein L3 [Yersinia pestis CA88-4125] gi|152960129|gb|ABS47590.1| ribosomal protein L3 [Yersinia pseudotuberculosis IP 31758] gi|162352080|gb|ABX86028.1| ribosomal protein L3 [Yersinia pestis Angola] gi|165912038|gb|EDR30679.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str. IP275] gi|165920186|gb|EDR37487.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str. F1991016] gi|165990554|gb|EDR42855.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str. E1979001] gi|166205528|gb|EDR50008.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str. B42003004] gi|166962741|gb|EDR58762.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051103|gb|EDR62511.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055329|gb|EDR65123.1| ribosomal protein L3 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749078|gb|ACA66596.1| ribosomal protein L3 [Yersinia pseudotuberculosis YPIII] gi|186700210|gb|ACC90839.1| ribosomal protein L3 [Yersinia pseudotuberculosis PB1/+] gi|229678669|gb|EEO74774.1| 50S ribosomal subunit protein L3 [Yersinia pestis Nepal516] gi|229690459|gb|EEO82513.1| 50S ribosomal subunit protein L3 [Yersinia pestis biovar Orientalis str. India 195] gi|229696433|gb|EEO86480.1| 50S ribosomal subunit protein L3 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706377|gb|EEO92384.1| 50S ribosomal subunit protein L3 [Yersinia pestis Pestoides A] gi|262360369|gb|ACY57090.1| 50S ribosomal protein L3 [Yersinia pestis D106004] gi|262364321|gb|ACY60878.1| 50S ribosomal protein L3 [Yersinia pestis D182038] gi|270336737|gb|EFA47514.1| 50S ribosomal protein L3 [Yersinia pestis KIM D27] gi|294352748|gb|ADE63089.1| 50S ribosomal protein L3 [Yersinia pestis Z176003] gi|320013342|gb|ADV96913.1| 50S ribosomal subunit protein L3 [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 209 Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 93/202 (46%), Positives = 127/202 (62%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V ++L+ +GY AVQV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYRAVQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ + + G S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLPEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG MG RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHMGDERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGGNLIV 203 >gi|325916487|ref|ZP_08178756.1| LSU ribosomal protein L3P [Xanthomonas vesicatoria ATCC 35937] gi|325537276|gb|EGD09003.1| LSU ribosomal protein L3P [Xanthomonas vesicatoria ATCC 35937] Length = 216 Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 95/211 (45%), Positives = 130/211 (61%), Gaps = 4/211 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G V RK GM+ V+ +GR +PVT++ ++ +T++ +GY AVQ+ G + V+K Sbjct: 8 GFVGRKAGMSRVFTEDGRSVPVTLIEATPNRIAQIKTVETDGYSAVQITVGARRAALVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 P G F+ V + L+EFRV+ D L VG F VGQ VDV G+T GKGF Sbjct: 68 PAAGHFAKAKVEAGRGLWEFRVE-DAQLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQ 126 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR+NF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + + +NLEVV Sbjct: 127 GTIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVK 186 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +RGLI ++G VPGA ++VR + K+ Sbjct: 187 VDVERGLIAIRGAVPGAAGGD-VIVRPASKA 216 >gi|300933010|ref|ZP_07148266.1| 50S ribosomal protein L3 [Corynebacterium resistens DSM 45100] Length = 218 Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 91/203 (44%), Positives = 125/203 (61%), Gaps = 3/203 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT +++ E R +PVTV+ C V RT + +GY AVQ+ GE + V+K Sbjct: 8 GILGKKLGMTQIFDDENRVVPVTVVEAGPCVVTQVRTKETDGYEAVQIAFGEIDPRKVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ + E RV+ D VG + F + VDVTG+T G G++GA Sbjct: 68 PAAGHFKKAGVTPRRHVTEIRVE-DASAYEVGQDVTVEIFNDVKFVDVTGITKGHGYAGA 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G A+HG +HR G G PGR+FK K+MAGRMG +RVT++NL+V VD Sbjct: 127 MKRHGFAGQGASHGNQAAHRRVGGIGACATPGRIFKGKRMAGRMGSDRVTLQNLKVAKVD 186 Query: 184 DKRGLILVKGCVPGAKKNSWILV 206 + L+LVKG VPG N I+V Sbjct: 187 AESNLLLVKGAVPG--NNGGIVV 207 >gi|170769506|ref|ZP_02903959.1| ribosomal protein L3 [Escherichia albertii TW07627] gi|170121563|gb|EDS90494.1| ribosomal protein L3 [Escherichia albertii TW07627] Length = 209 Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 92/202 (45%), Positives = 128/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|312889367|ref|ZP_07748921.1| LSU ribosomal protein L3P [Mucilaginibacter paludis DSM 18603] gi|311298244|gb|EFQ75359.1| LSU ribosomal protein L3P [Mucilaginibacter paludis DSM 18603] Length = 205 Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 91/205 (44%), Positives = 129/205 (62%), Gaps = 4/205 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C V +++D +GY AVQ+ GE K KN S Sbjct: 2 SGIIGKKVGMTSIFDEAGKNIPCTVIEAGPCVVTHVKSVDTDGYAAVQLAYGEKKEKNTS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G F +PK+KL EF+ +D+ L G V + F+ G VDV G + GKGF G Sbjct: 62 GPLKGHFQKAGTTPKRKLVEFKTFEDEKSL--GDVITVDLFSAGDFVDVVGTSKGKGFQG 119 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG+ THG R+ GS G P RVFK +MAG MG +RV V+NL+VV Sbjct: 120 VVKRHGFGGVGMQTHGQHNRLRAPGSLGASSWPSRVFKGMRMAGHMGNSRVKVQNLQVVK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 V ++ LI+VKG +PGA K S+++V Sbjct: 180 VYPEQNLIVVKGSIPGA-KGSFVIV 203 >gi|15617118|ref|NP_240331.1| 50S ribosomal protein L3 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11134328|sp|P57591|RL3_BUCAI RecName: Full=50S ribosomal protein L3 gi|25294942|pir||A84991 50S ribosomal protein L3 [imported] - Buchnera sp. (strain APS) gi|10039183|dbj|BAB13217.1| 50S ribosomal protein L3 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 209 Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 89/202 (44%), Positives = 129/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ EG IPVTV+ L ++ + ++ + Y A+QV G K ++K Sbjct: 3 GLVGKKIGMTRIFTEEGTSIPVTVIELKENRITQVKNINTDLYCAIQVTTGIKKSNRLNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P + L+EFR K+++ +G + + F + VD+TG++ GKGFSG Sbjct: 63 PQSGHFLKSGVTPGRGLWEFRTDKNNNF-KIGQSITINIFNNVKKVDITGISKGKGFSGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG++G RVTV++L +V +D Sbjct: 122 VKRWNFHTQDATHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGQLGNTRVTVQSLNIVRID 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 + R L+LVKG VPGA + I+ Sbjct: 182 EHRNLLLVKGAVPGATGSDLIV 203 >gi|170077685|ref|YP_001734323.1| 50S ribosomal protein L3 [Synechococcus sp. PCC 7002] gi|226730579|sp|B1XJT9|RL3_SYNP2 RecName: Full=50S ribosomal protein L3 gi|169885354|gb|ACA99067.1| ribosomal protein L3 [Synechococcus sp. PCC 7002] Length = 213 Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 90/204 (44%), Positives = 129/204 (63%), Gaps = 7/204 (3%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT +++ E G IPVTV+ C V +T + +GY +VQ+G G+ K K Sbjct: 1 MSLGILGTKLGMTQIFDNETGTAIPVTVVQAGPCTVTQIKTSETDGYTSVQIGYGDVKEK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIG 117 N++KP G + +P + L E+R+ DD+ +G + + F GQ+VDV+G TIG Sbjct: 61 NLTKPQLGHLKKADAAPLRHLKEYRL---DDVSGYELGQAITANIFEAGQVVDVSGNTIG 117 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 +GF+G KRHNF THG S +HR GSTG PGRV+ K+MAGR GG ++TV+ L Sbjct: 118 RGFAGYQKRHNFKRGNMTHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGRYGGTKITVRKL 176 Query: 178 EVVSVDDKRGLILVKGCVPGAKKN 201 EVV VD+++ L+L+KG +PG N Sbjct: 177 EVVRVDEEKNLLLIKGAIPGKAGN 200 >gi|261342790|ref|ZP_05970648.1| 50S ribosomal protein L3 [Enterobacter cancerogenus ATCC 35316] gi|288314968|gb|EFC53906.1| 50S ribosomal protein L3 [Enterobacter cancerogenus ATCC 35316] Length = 209 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 93/202 (46%), Positives = 128/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQDISVELFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|254796647|ref|YP_003081483.1| ribosomal protein L3 [Neorickettsia risticii str. Illinois] gi|254589884|gb|ACT69246.1| ribosomal protein L3 [Neorickettsia risticii str. Illinois] Length = 210 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 99/210 (47%), Positives = 134/210 (63%), Gaps = 7/210 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ +K+G T VY+ +PVT+L L+ + VV +++G + +V G K+K Sbjct: 3 RVGLLLKKVGCTSVYDDRSSLVPVTLLQLE--ENVVLSAEERDGVVVTRVSFGTRKLK-- 58 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP + + + ++ EFRV P+GS + +F GQ VD G +IGKGF+ Sbjct: 59 -KPQLAYLRKLGLEKGGRVVEFRVSPRFVPEPLGS-LTVEHFRPGQYVDAVGTSIGKGFA 116 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF GLRA+HGVSISHRS GSTG QDPG+VFK KKMAG MG RVT++NL V Sbjct: 117 GVMKRHNFAGLRASHGVSISHRSGGSTGQCQDPGKVFKGKKMAGHMGNARVTMQNLLVQL 176 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + LI V+G VPG KNS++L+RD+ K Sbjct: 177 VDVENCLIGVRGSVPGC-KNSYVLLRDALK 205 >gi|325068030|ref|ZP_08126703.1| 50S ribosomal protein L3 [Actinomyces oris K20] Length = 222 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 89/209 (42%), Positives = 128/209 (61%), Gaps = 2/209 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ KLGMT +++ G PVTV+ +D V RT++ +GY AVQ+ G+ + V+KP Sbjct: 16 LLGTKLGMTQIWDENGVLRPVTVVRVDTNVVTQVRTIETDGYEAVQLAFGDIDARKVTKP 75 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + G F+ V P++ + E R + P G + F VGQLVDVTG + GKGF+G M Sbjct: 76 LAGHFAKAGVEPRRHVAEIRTSLASEFTP-GQELAADTFEVGQLVDVTGTSKGKGFAGVM 134 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH F G+ A+HG +HR GS G PGR+FK +MAGRMG R TV+NL++ +D Sbjct: 135 KRHGFAGVGASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGHARRTVQNLKIRGIDV 194 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +G++LV G +PG K S ++VR + K A Sbjct: 195 DKGVLLVNGAIPG-PKGSVVVVRTAVKGA 222 >gi|152972227|ref|YP_001337373.1| 50S ribosomal protein L3 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206576036|ref|YP_002236281.1| ribosomal protein L3 [Klebsiella pneumoniae 342] gi|238896816|ref|YP_002921561.1| 50S ribosomal protein L3 [Klebsiella pneumoniae NTUH-K2044] gi|262045177|ref|ZP_06018204.1| 50S ribosomal protein L3 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288933266|ref|YP_003437325.1| 50S ribosomal protein L3 [Klebsiella variicola At-22] gi|290512069|ref|ZP_06551437.1| 50S ribosomal protein L3 [Klebsiella sp. 1_1_55] gi|330002294|ref|ZP_08304288.1| 50S ribosomal protein L3 [Klebsiella sp. MS 92-3] gi|166233150|sp|A6TEX2|RL3_KLEP7 RecName: Full=50S ribosomal protein L3 gi|226730525|sp|B5XN94|RL3_KLEP3 RecName: Full=50S ribosomal protein L3 gi|150957076|gb|ABR79106.1| 50S ribosomal protein L3 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206565094|gb|ACI06870.1| ribosomal protein L3 [Klebsiella pneumoniae 342] gi|238549143|dbj|BAH65494.1| 50S ribosomal protein L3 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259037497|gb|EEW38741.1| 50S ribosomal protein L3 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288887995|gb|ADC56313.1| 50S ribosomal protein L3 [Klebsiella variicola At-22] gi|289775859|gb|EFD83859.1| 50S ribosomal protein L3 [Klebsiella sp. 1_1_55] gi|328537367|gb|EGF63617.1| 50S ribosomal protein L3 [Klebsiella sp. MS 92-3] Length = 209 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 93/202 (46%), Positives = 127/202 (62%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ D + VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLA-DGEEFTVGQNISVELFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|148655337|ref|YP_001275542.1| 50S ribosomal protein L3 [Roseiflexus sp. RS-1] gi|166234588|sp|A5USI9|RL3_ROSS1 RecName: Full=50S ribosomal protein L3 gi|148567447|gb|ABQ89592.1| LSU ribosomal protein L3P [Roseiflexus sp. RS-1] Length = 210 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 130/213 (61%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V++ G+ IPVT++ + C V RT +++GY AVQ+G E K K+ Sbjct: 1 MIEGLLGRKIGMTQVFDATGQVIPVTIIEVGPCVVTQIRTKERDGYEAVQIGYQEVKAKS 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P +G + L EFR D VG V + FT GQ VDV G + G+GF Sbjct: 61 LTRPEQGHLRGAG-KLLRHLREFRADNIADH-KVGDVLTVEMFTPGQRVDVIGTSKGRGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH FGG THG S R+ GS G DPG V KN +MAGRMG RVTV+NL VV Sbjct: 119 QGVVKRHGFGGGPRTHGQSDRLRAPGSIGAGTDPGHVLKNTRMAGRMGNQRVTVQNLTVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V +R L+LV+G +PGA KN ++VR + K + Sbjct: 179 DVVPERNLLLVRGSIPGA-KNGLVMVRRAIKGS 210 >gi|323966282|gb|EGB61717.1| 50S ribosomal protein L3 [Escherichia coli M863] Length = 209 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 93/202 (46%), Positives = 127/202 (62%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVIK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|294638052|ref|ZP_06716312.1| 50S ribosomal protein L3 [Edwardsiella tarda ATCC 23685] gi|291088844|gb|EFE21405.1| 50S ribosomal protein L3 [Edwardsiella tarda ATCC 23685] Length = 209 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 92/202 (45%), Positives = 127/202 (62%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + LD +GY A+QV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLDNDGYRAIQVTTGSKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L EFR+ + ++ +G S F + VDVTG++ GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRVLREFRLSEGEEFT-IGQNISVEIFADVKKVDVTGISKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG +G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA I+ Sbjct: 182 AERNLLLVKGAVPGATGGDLIV 203 >gi|15837754|ref|NP_298442.1| 50S ribosomal protein L3 [Xylella fastidiosa 9a5c] gi|9106116|gb|AAF83962.1|AE003950_12 50S ribosomal protein L3 [Xylella fastidiosa 9a5c] Length = 210 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 100/209 (47%), Positives = 129/209 (61%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G V RK GM+ V+ +G IPVT++ +VV +T D +GY AVQV G + V+K Sbjct: 2 GFVGRKAGMSRVFLEDGCSIPVTLIEATANRVVQIKTSDVDGYDAVQVTVGSRRSVLVNK 61 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P G F+ V + L+EFRV+K VGS S F VGQ VD+ G+T GKGF G Sbjct: 62 PESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGFQG 121 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHNF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG R +V+NLEVV + Sbjct: 122 TIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEVVKI 181 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +R LI V+G +PGA +L+R + K Sbjct: 182 DVERCLIAVRGAIPGASGGD-VLIRSASK 209 >gi|114778824|ref|ZP_01453631.1| 50S ribosomal protein L3 [Mariprofundus ferrooxydans PV-1] gi|114550955|gb|EAU53519.1| 50S ribosomal protein L3 [Mariprofundus ferrooxydans PV-1] Length = 199 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 93/202 (46%), Positives = 126/202 (62%), Gaps = 3/202 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++ +G I VTVL+++ C+VV R+ DK+GY AVQVG G AK +N ++P++G ++ Sbjct: 1 MTQIFTADGSAIAVTVLNIEPCKVVARRSADKDGYDAVQVGFGAAK-RNTTRPVQGHYAR 59 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 L EFR+ D + +G + + F GQ +DV+G + G GF+G MKR+NFGG Sbjct: 60 QGQEVAGGLKEFRIAADAEF-ELGQELNATLFEAGQKIDVSGTSKGHGFAGVMKRYNFGG 118 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 RATHG HR GSTG Q PGRVF KKM G G R T +NLEVV VD + ILV Sbjct: 119 GRATHGAEKVHRQMGSTGQCQWPGRVFPGKKMPGHFGNVRSTTQNLEVVRVDAEANRILV 178 Query: 192 KGCVPGAKKNSWILVRDSFKSA 213 KG VPG+ +N + +R + K A Sbjct: 179 KGAVPGS-RNGLVELRPAVKGA 199 >gi|329945684|ref|ZP_08293414.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 170 str. F0386] gi|328528492|gb|EGF55466.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 170 str. F0386] Length = 222 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 90/209 (43%), Positives = 128/209 (61%), Gaps = 2/209 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ KLGMT +++ G PVTV+ +D V RT++ +GY AVQ+ G+ + V+KP Sbjct: 16 LLGTKLGMTQIWDENGVLRPVTVVRVDTNVVTQVRTIETDGYEAVQLAFGDINARKVTKP 75 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + G F+ V P++ + E R + P G + F VGQLVDVTG + GKGF+G M Sbjct: 76 LAGHFAKAGVEPRRHVAEVRTSLASEFTP-GQELAADTFEVGQLVDVTGTSKGKGFAGVM 134 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH F G+ A+HG +HR GS G PGR+FK +MAGRMG R TV+NL++ VD Sbjct: 135 KRHGFAGVGASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGHARRTVQNLKIRGVDV 194 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +G++LV G +PG K S ++VR + K A Sbjct: 195 DKGVLLVNGAIPG-PKGSVVVVRTAVKGA 222 >gi|283788044|ref|YP_003367909.1| 50S ribosomal subunit protein L3 [Citrobacter rodentium ICC168] gi|282951498|emb|CBG91197.1| 50S ribosomal subunit protein L3 [Citrobacter rodentium ICC168] Length = 209 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 92/202 (45%), Positives = 127/202 (62%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L GY A+QV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANEGYRAIQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|332172249|gb|AEE21503.1| 50S ribosomal protein L3 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 212 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 91/199 (45%), Positives = 127/199 (63%), Gaps = 1/199 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G IPVTV+ +V RT + +GY A+QV AG+ K Sbjct: 1 MAIGLIGRKVGMTRIFTEDGVSIPVTVIEATPNRVTQLRTDETDGYTALQVTAGDKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQ-KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L+EFR+ + + + VGS + F ++VDV G + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLWEFRLDGTEGEGIEVGSEITVEIFAETKMVDVAGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F GA+KR NF R +HG S+SHR+ GS G Q PG+VFK KKMAG+MG RVTV++L+V Sbjct: 121 FQGAIKRWNFSHQRNSHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNKRVTVQSLDV 180 Query: 180 VSVDDKRGLILVKGCVPGA 198 V VD + L+LV+G VPGA Sbjct: 181 VRVDAENNLLLVRGNVPGA 199 >gi|21241737|ref|NP_641319.1| 50S ribosomal protein L3 [Xanthomonas axonopodis pv. citri str. 306] gi|78046555|ref|YP_362730.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|294627843|ref|ZP_06706422.1| 50S ribosomal protein L3 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294663996|ref|ZP_06729410.1| 50S ribosomal protein L3 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325925387|ref|ZP_08186789.1| LSU ribosomal protein L3P [Xanthomonas perforans 91-118] gi|42559654|sp|Q8PNS4|RL3_XANAC RecName: Full=50S ribosomal protein L3 gi|109893571|sp|Q3BWY3|RL3_XANC5 RecName: Full=50S ribosomal protein L3 gi|21107108|gb|AAM35855.1| 50S ribosomal protein L3 [Xanthomonas axonopodis pv. citri str. 306] gi|78034985|emb|CAJ22630.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|292597757|gb|EFF41915.1| 50S ribosomal protein L3 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292606225|gb|EFF49462.1| 50S ribosomal protein L3 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325544265|gb|EGD15646.1| LSU ribosomal protein L3P [Xanthomonas perforans 91-118] Length = 216 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 96/211 (45%), Positives = 130/211 (61%), Gaps = 4/211 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G V RK GM+ V+ +GR +PVT++ ++ +T++ +GY AVQV G + V+K Sbjct: 8 GFVGRKAGMSRVFTEDGRSVPVTLIEATPNRIAQIKTVEVDGYSAVQVTVGARRAALVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 P G F+ V + L+EFRV+ D L VG F VGQ VDV G+T GKGF Sbjct: 68 PAAGHFAKAKVEAGRGLWEFRVE-DAQLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQ 126 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR+NF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + + +NLEVV Sbjct: 127 GTIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVK 186 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +RGLI ++G VPGA ++VR + K+ Sbjct: 187 VDVERGLIAIRGAVPGAAGGD-VIVRPASKA 216 >gi|22297625|ref|NP_680872.1| 50S ribosomal protein L3 [Thermosynechococcus elongatus BP-1] gi|42559634|sp|Q8DMN1|RL3_THEEB RecName: Full=50S ribosomal protein L3 gi|22293802|dbj|BAC07634.1| 50S ribosomal protein L3 [Thermosynechococcus elongatus BP-1] Length = 212 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 87/197 (44%), Positives = 121/197 (61%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT +++ GR +P+TV+ C + +T +GY A+QV GE + KN Sbjct: 1 MTVGILGTKLGMTQIFDEAGRSVPITVVQAGPCPITQIKTPQTDGYTAIQVAYGEVREKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +S+P RG + P + L EFR++ D +G + F+ GQLVDV G +IG+GF Sbjct: 61 LSRPERGHLNKSQTPPMRHLREFRLE-DVSAYQLGQAITVDIFSPGQLVDVRGTSIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRHNF HG S +HR GSTG PGRVF K+MAGRMG VT++ L+V+ Sbjct: 120 AGYQKRHNFKRGPMAHG-SKNHRLPGSTGAGTTPGRVFPGKRMAGRMGNTAVTIRKLQVM 178 Query: 181 SVDDKRGLILVKGCVPG 197 VD +R LIL+KG +PG Sbjct: 179 RVDPERNLILIKGALPG 195 >gi|292669860|ref|ZP_06603286.1| 50S ribosomal protein L3 [Selenomonas noxia ATCC 43541] gi|292648657|gb|EFF66629.1| 50S ribosomal protein L3 [Selenomonas noxia ATCC 43541] Length = 220 Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 99/215 (46%), Positives = 131/215 (60%), Gaps = 5/215 (2%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RKLGMT ++ EGR +PVTV+ N V+ ++T + +GY AVQ+G GE K KNV+KP Sbjct: 8 ILGRKLGMTQIFTEEGRVVPVTVVESGNNFVLQNKTDETDGYNAVQIGFGEVKEKNVNKP 67 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 ++G F V + + E R+ + VG F G LVDV G + GKGF+G + Sbjct: 68 LKGHFEKAGVKAVRFIREMRLSAPSE-YNVGDTIGVDIFAAGDLVDVVGTSKGKGFAGGI 126 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCR-QDP-GRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 KRHNF HG S SHR GSTG P GRV K KK+ GRMGG RVTV+ L VV V Sbjct: 127 KRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLTVVRV 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 D R LIL+KG +PG KK +++++D+ K A K Sbjct: 186 DADRNLILIKGAIPGPKK-GFVVIKDTVKPAKAAK 219 >gi|227328949|ref|ZP_03832973.1| 50S ribosomal protein L3 [Pectobacterium carotovorum subsp. carotovorum WPP14] gi|253690183|ref|YP_003019373.1| ribosomal protein L3 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259709730|sp|C6DG74|RL3_PECCP RecName: Full=50S ribosomal protein L3 gi|251756761|gb|ACT14837.1| ribosomal protein L3 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 209 Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 93/202 (46%), Positives = 127/202 (62%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRTLREFRLSEGEEFT-VGQSISVEIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|21672770|ref|NP_660837.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25009109|sp|Q8K950|RL3_BUCAP RecName: Full=50S ribosomal protein L3 gi|21623417|gb|AAM68048.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 209 Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 88/194 (45%), Positives = 121/194 (62%), Gaps = 1/194 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +KLGM+ ++ EG IP+TV+ + ++ R + + Y A+QV G K+ + K Sbjct: 3 GLVGKKLGMSRIFTKEGSSIPITVIQIQENRITQIRNIKTDKYYAIQVTTGLKKLNRLKK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V P + L+EFR+ +++ +G + F + VDVTG++ GKGFSG Sbjct: 63 PESGHFLKSGVIPGRGLWEFRIN-NNEKFQIGQSIKINIFNDIKKVDVTGISKGKGFSGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G NRVTV+NL +V +D Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGHLGNNRVTVQNLNIVKID 181 Query: 184 DKRGLILVKGCVPG 197 R L+LVKG VPG Sbjct: 182 QNRNLLLVKGAVPG 195 >gi|269796255|ref|YP_003315710.1| 50S ribosomal protein L3P [Sanguibacter keddieii DSM 10542] gi|269098440|gb|ACZ22876.1| LSU ribosomal protein L3P [Sanguibacter keddieii DSM 10542] Length = 219 Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 92/211 (43%), Positives = 127/211 (60%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 + V+ KLGMT V++ GR +PVTV+ + V RT + +GY AVQ+ G+ + VS Sbjct: 11 TAVLGTKLGMTQVWDEAGRLVPVTVVQVGTNVVTQVRTAELDGYAAVQLAYGQIDPRKVS 70 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 +P++G F V+P++ + E R D +G + F G +VDV G T GKGF+G Sbjct: 71 QPLKGHFEKAGVTPRRHVTEIRT-SDAGEFTLGQELTAEAFASGSVVDVIGTTKGKGFAG 129 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G P RVFK +MAGRMG +R T +NL V +V Sbjct: 130 VMKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGVRMAGRMGVDRQTTQNLTVHAV 189 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+LVKG VPG K +LVR + K A Sbjct: 190 DAEKGLLLVKGAVPG-PKGGVVLVRSAAKGA 219 >gi|21230364|ref|NP_636281.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769642|ref|YP_244404.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris str. 8004] gi|166710831|ref|ZP_02242038.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzicola BLS256] gi|188992854|ref|YP_001904864.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris str. B100] gi|42559653|sp|Q8PC49|RL3_XANCP RecName: Full=50S ribosomal protein L3 gi|81304403|sp|Q4URD9|RL3_XANC8 RecName: Full=50S ribosomal protein L3 gi|226730589|sp|B0RU82|RL3_XANCB RecName: Full=50S ribosomal protein L3 gi|21111920|gb|AAM40205.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574974|gb|AAY50384.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris str. 8004] gi|167734614|emb|CAP52824.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris] Length = 216 Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 95/211 (45%), Positives = 130/211 (61%), Gaps = 4/211 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G V RK GM+ V+ +GR +PVT++ ++ +T++ +GY AVQ+ G + V+K Sbjct: 8 GFVGRKAGMSRVFTEDGRSVPVTLIEATPNRIAQIKTVEVDGYSAVQITVGARRAALVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 P G F+ V + L+EFRV+ D L VG F VGQ VDV G+T GKGF Sbjct: 68 PAAGHFAKAKVEAGRGLWEFRVE-DAQLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQ 126 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR+NF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + + +NLEVV Sbjct: 127 GTIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVK 186 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +RGLI ++G VPGA ++VR + K+ Sbjct: 187 VDVERGLIAIRGAVPGAAGGD-VIVRPASKA 216 >gi|308814220|ref|XP_003084415.1| putative ribosomal protein L3 (ISS) [Ostreococcus tauri] gi|116056300|emb|CAL56683.1| putative ribosomal protein L3 (ISS) [Ostreococcus tauri] Length = 312 Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 98/211 (46%), Positives = 126/211 (59%), Gaps = 3/211 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVKN 60 R+G + K GMT ++ G R +TV+ LD +VV D NGY AVQ+G G K K Sbjct: 61 RTGAIGIKCGMTADWDARGCRHALTVVWLDGVEVVRRTGRDGANGYDAVQIGYGARKAKG 120 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F K+ L EFRV + L P G+V + ++F GQ VDV G T GKGF Sbjct: 121 VTKAELGHFVRHGSGIKRGLKEFRVSRCGTLTP-GTVITAAHFAAGQYVDVGGTTKGKGF 179 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G MKR F G ATHG + HR+HGS G QDPGRVFK KKMAGRMGG R TV++ V Sbjct: 180 QGPMKRWGFAGQPATHGNTKKHRAHGSIGQCQDPGRVFKGKKMAGRMGGRRRTVQSAYVW 239 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L+ +KG +PG + + +RD+ + Sbjct: 240 KVDTERNLLYIKGQIPGGAGTA-VTIRDALR 269 >gi|42559703|sp|Q9PE76|RL3_XYLFA RecName: Full=50S ribosomal protein L3 Length = 215 Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 100/209 (47%), Positives = 129/209 (61%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G V RK GM+ V+ +G IPVT++ +VV +T D +GY AVQV G + V+K Sbjct: 7 GFVGRKAGMSRVFLEDGCSIPVTLIEATANRVVQIKTSDVDGYDAVQVTVGSRRSVLVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P G F+ V + L+EFRV+K VGS S F VGQ VD+ G+T GKGF G Sbjct: 67 PESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGFQG 126 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHNF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG R +V+NLEVV + Sbjct: 127 TIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEVVKI 186 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +R LI V+G +PGA +L+R + K Sbjct: 187 DVERCLIAVRGAIPGASGGD-VLIRSASK 214 >gi|71902234|ref|ZP_00684241.1| Ribosomal protein L3 [Xylella fastidiosa Ann-1] gi|71728008|gb|EAO30222.1| Ribosomal protein L3 [Xylella fastidiosa Ann-1] Length = 215 Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 100/209 (47%), Positives = 129/209 (61%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G V RK GM+ V+ +G IPVT++ +VV +T D +GY AVQV G + V+K Sbjct: 7 GFVGRKAGMSRVFLEDGCSIPVTLIEATANRVVQIKTSDVDGYDAVQVTVGSRRSVLVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P G F+ V + L+EFRV+K VGS S F VGQ VD+ G+T GKGF G Sbjct: 67 PESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGFQG 126 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHNF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG R +V+NLEV+ + Sbjct: 127 TIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEVIKI 186 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +R LI V+G VPGA +L+R + K Sbjct: 187 DVERCLIAVRGAVPGASGGD-VLIRSASK 214 >gi|86739295|ref|YP_479695.1| 50S ribosomal protein L3 [Frankia sp. CcI3] gi|109893429|sp|Q2JFH6|RL3_FRASC RecName: Full=50S ribosomal protein L3 gi|86566157|gb|ABD09966.1| LSU ribosomal protein L3P [Frankia sp. CcI3] Length = 235 Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 93/208 (44%), Positives = 124/208 (59%), Gaps = 2/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ V +T D +GY AVQ+G GE + ++K Sbjct: 8 GLLGTKLGMTQVWDANNRVVPVTVIKAGPNVVTQVKTPDSDGYSAVQLGYGEVDPRKINK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P RG F++ V+P++ L E R + P G + F+ G +VDVTG + GKGF+G Sbjct: 68 PARGHFATSGVTPRRHLVELRTADAGNYRP-GQELTGEVFSAGTVVDVTGTSKGKGFAGV 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GL A HGV HRS GS G PGRVFK +MAGRMG R T L + +VD Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGHVRTTTSGLTIHAVD 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 +RG +LV+G VPG +LVR + K Sbjct: 187 TERGYLLVRGAVPG-PDGGLVLVRSAAK 213 >gi|296105028|ref|YP_003615174.1| 50S ribosomal protein L3 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059487|gb|ADF64225.1| 50S ribosomal protein L3 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295096961|emb|CBK86051.1| LSU ribosomal protein L3P [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 209 Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 92/202 (45%), Positives = 128/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQDISVELFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|34541541|ref|NP_906020.1| 50S ribosomal protein L3 [Porphyromonas gingivalis W83] gi|188995732|ref|YP_001929984.1| 50S ribosomal protein L3 [Porphyromonas gingivalis ATCC 33277] gi|42559592|sp|Q7MTL3|RL3_PORGI RecName: Full=50S ribosomal protein L3 gi|226730547|sp|B2RLZ2|RL3_PORG3 RecName: Full=50S ribosomal protein L3 gi|34397858|gb|AAQ66919.1| ribosomal protein L3 [Porphyromonas gingivalis W83] gi|188595412|dbj|BAG34387.1| 50S ribosomal protein L3 [Porphyromonas gingivalis ATCC 33277] Length = 205 Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 91/205 (44%), Positives = 133/205 (64%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EG+ +P TV+ + C V +TL+K+GY A+Q+G +AK K+ +K Sbjct: 3 GLLGKKIGMTSVFSAEGKNLPCTVIEVGPCVVTQVKTLEKDGYSALQLGFVDAKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F NV+PK+ L EF+ + + L G V + +F+ VDV G + GKGF G Sbjct: 63 PLAGHFKKANVAPKRHLAEFKNFEGEHKL--GDVLNVEFFSDADFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ +ATHG R+ G+ G P +VFK +MAG+MG RVTV+NLEV+ V Sbjct: 121 VKRHGFGGVGQATHGQHNRLRAPGAVGACSYPAKVFKGTRMAGQMGNERVTVQNLEVIKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + L+LVKG VPGA K S +L+ Sbjct: 181 MPEHNLLLVKGSVPGA-KGSILLIE 204 >gi|261823232|ref|YP_003261338.1| 50S ribosomal protein L3 [Pectobacterium wasabiae WPP163] gi|261607245|gb|ACX89731.1| 50S ribosomal protein L3 [Pectobacterium wasabiae WPP163] Length = 209 Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 92/202 (45%), Positives = 127/202 (62%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L EFR+ + ++ +G S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRTLREFRLSEGEEFT-IGQSISVEIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|328884426|emb|CCA57665.1| LSU ribosomal protein L3p [Streptomyces venezuelae ATCC 10712] Length = 218 Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 93/208 (44%), Positives = 126/208 (60%), Gaps = 2/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ GE + V+K Sbjct: 11 GILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDIDGYESVQIAFGEIDPRKVNK 70 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 71 PLKGHFAKADVTPRRHLVELRTA-DASEYTLGQEITAEVFEAGVKVDVTGKSKGKGFAGV 129 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF G +A+HG HR GS G PGRVFK +MAGRMG RVT +NL V +VD Sbjct: 130 MKRHNFRGGKASHGAHRVHRKPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTVHAVD 189 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 ++GL+L+KG VPG +LVR + K Sbjct: 190 AEKGLLLIKGAVPGP-NGGLVLVRTAAK 216 >gi|308047991|ref|YP_003911557.1| 50S ribosomal protein L3P [Ferrimonas balearica DSM 9799] gi|307630181|gb|ADN74483.1| LSU ribosomal protein L3P [Ferrimonas balearica DSM 9799] Length = 212 Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 130/213 (61%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTV+ ++ +V +TLD +GY A+QV AG K Sbjct: 1 MAIGLVGRKVGMTRIFTPEGVSIPVTVIEVEPNRVTQVKTLDTDGYSALQVTAGAKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV-FSPSYFTVGQLVDVTGMTIGKG 119 V+KP G F+ V + +EFR+ + + FT VDVTG + GKG Sbjct: 61 VTKPEAGHFAKAGVEAGRGTWEFRLGEGEGEGIELGAELKVDIFTDVAKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F GA+KR NF THG S+SHR+ GS G Q PG+VFK KKMAG MG RVT +NL+V Sbjct: 121 FQGAIKRWNFRSQDMTHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGHMGAERVTTQNLDV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LVKG +PGA + ++V+ + K+ Sbjct: 181 VRVDVERNLLLVKGAIPGANGGN-VIVKPAVKA 212 >gi|238754175|ref|ZP_04615533.1| 50S ribosomal protein L3 [Yersinia ruckeri ATCC 29473] gi|238707671|gb|EEQ00031.1| 50S ribosomal protein L3 [Yersinia ruckeri ATCC 29473] Length = 209 Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 92/202 (45%), Positives = 127/202 (62%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V ++L+ +GY AVQV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYRAVQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ + + G S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLAEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG +G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGGNLIV 203 >gi|224827017|ref|ZP_03700114.1| ribosomal protein L3 [Lutiella nitroferrum 2002] gi|224600683|gb|EEG06869.1| ribosomal protein L3 [Lutiella nitroferrum 2002] Length = 214 Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 97/213 (45%), Positives = 128/213 (60%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTVL + +V +T + +GY A+QV G K Sbjct: 1 MSLGLVGRKVGMTRIFAEDGASIPVTVLDMAANRVTQIKTAEVDGYEAIQVTYGSCKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + + G + F VGQLVDVTG + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLGEFVLNAEQLSQFKPGDAITVEIFQVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNF RA+HG S SH + GS G QDPGRV K+MAG+ G + TV+ LE+ Sbjct: 121 FSGVIKRHNFSSNRASHGNSRSHNTPGSIGQAQDPGRVLPGKRMAGQYGNVQSTVQRLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V +D +R LILVKG VPGA N ++VR S K+ Sbjct: 181 VRIDTERQLILVKGAVPGA-TNGDVVVRPSVKA 212 >gi|37528543|ref|NP_931888.1| 50S ribosomal protein L3 [Photorhabdus luminescens subsp. laumondii TTO1] gi|42559593|sp|Q7MYF1|RL3_PHOLL RecName: Full=50S ribosomal protein L3 gi|36787981|emb|CAE17098.1| 50S ribosomal protein L3 [Photorhabdus luminescens subsp. laumondii TTO1] Length = 209 Score = 168 bits (425), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 91/202 (45%), Positives = 129/202 (63%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ +++ +V + LD +GY A+QV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIEDNRVTQVKELDNDGYRAIQVTTGSKKASRVNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRILREFRLSEGEEY-AVGQSISVEIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF A+HG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDASHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPG+ + I+ Sbjct: 182 AERNLLLVKGAVPGSTGGNLIV 203 >gi|16762843|ref|NP_458460.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16766729|ref|NP_462344.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29144330|ref|NP_807672.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56415359|ref|YP_152434.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62181944|ref|YP_218361.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|168260850|ref|ZP_02682823.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168468001|ref|ZP_02701838.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194445166|ref|YP_002042690.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194447875|ref|YP_002047463.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194472945|ref|ZP_03078929.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194737134|ref|YP_002116382.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197248367|ref|YP_002148359.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264223|ref|ZP_03164297.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197364289|ref|YP_002143926.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198243139|ref|YP_002217402.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200387538|ref|ZP_03214150.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205354932|ref|YP_002228733.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858682|ref|YP_002245333.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213052953|ref|ZP_03345831.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213583772|ref|ZP_03365598.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213613028|ref|ZP_03370854.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646335|ref|ZP_03376388.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213865564|ref|ZP_03387683.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224585235|ref|YP_002639034.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238913845|ref|ZP_04657682.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289806054|ref|ZP_06536683.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289824750|ref|ZP_06544215.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|42559567|sp|P60445|RL3_SALTI RecName: Full=50S ribosomal protein L3 gi|42559568|sp|P60446|RL3_SALTY RecName: Full=50S ribosomal protein L3 gi|81309571|sp|Q57J32|RL3_SALCH RecName: Full=50S ribosomal protein L3 gi|81821488|sp|Q5PIV2|RL3_SALPA RecName: Full=50S ribosomal protein L3 gi|226730559|sp|B5F8F2|RL3_SALA4 RecName: Full=50S ribosomal protein L3 gi|226730560|sp|B5FJL4|RL3_SALDC RecName: Full=50S ribosomal protein L3 gi|226730561|sp|B5R291|RL3_SALEP RecName: Full=50S ribosomal protein L3 gi|226730562|sp|B5RH15|RL3_SALG2 RecName: Full=50S ribosomal protein L3 gi|226730563|sp|B4TKL5|RL3_SALHS RecName: Full=50S ribosomal protein L3 gi|226730564|sp|B4SUU0|RL3_SALNS RecName: Full=50S ribosomal protein L3 gi|226730565|sp|B5BGY6|RL3_SALPK RecName: Full=50S ribosomal protein L3 gi|226730566|sp|B4TXE2|RL3_SALSV RecName: Full=50S ribosomal protein L3 gi|254803688|sp|C0Q0B6|RL3_SALPC RecName: Full=50S ribosomal protein L3 gi|25294952|pir||AI1005 50S ribosomal chain protein L3 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16421997|gb|AAL22303.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16505149|emb|CAD08173.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp. enterica serovar Typhi] gi|29139968|gb|AAO71532.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56129616|gb|AAV79122.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62129577|gb|AAX67280.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|194403829|gb|ACF64051.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194406179|gb|ACF66398.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194459309|gb|EDX48148.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194712636|gb|ACF91857.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195628908|gb|EDX48318.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197095766|emb|CAR61336.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197212070|gb|ACH49467.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197242478|gb|EDY25098.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197937655|gb|ACH74988.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199604636|gb|EDZ03181.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205274713|emb|CAR39769.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205350127|gb|EDZ36758.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206710485|emb|CAR34843.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224469763|gb|ACN47593.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261248596|emb|CBG26434.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995649|gb|ACY90534.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159983|emb|CBW19502.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914463|dbj|BAJ38437.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087885|emb|CBY97648.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321226487|gb|EFX51537.1| LSU ribosomal protein L3p (L3e) [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322615019|gb|EFY11943.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617306|gb|EFY14207.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625528|gb|EFY22353.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626370|gb|EFY23179.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632118|gb|EFY28871.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635003|gb|EFY31726.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643296|gb|EFY39863.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646620|gb|EFY43127.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649966|gb|EFY46385.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652683|gb|EFY49023.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659560|gb|EFY55804.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665498|gb|EFY61685.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670392|gb|EFY66531.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670465|gb|EFY66599.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675041|gb|EFY71124.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681578|gb|EFY77607.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685922|gb|EFY81911.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322716431|gb|EFZ08002.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323131798|gb|ADX19228.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323194030|gb|EFZ79230.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196452|gb|EFZ81603.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202309|gb|EFZ87354.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207342|gb|EFZ92292.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211222|gb|EFZ96067.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216069|gb|EGA00800.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223440|gb|EGA07768.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226830|gb|EGA11020.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231808|gb|EGA15918.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233239|gb|EGA17334.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237306|gb|EGA21371.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245541|gb|EGA29540.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249047|gb|EGA32969.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250670|gb|EGA34551.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256899|gb|EGA40613.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263048|gb|EGA46595.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266048|gb|EGA49543.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272805|gb|EGA56208.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326625183|gb|EGE31528.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326630081|gb|EGE36424.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 209 Score = 168 bits (425), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 93/195 (47%), Positives = 125/195 (64%), Gaps = 1/195 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLAEGEEYT-VGQSISVELFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGA 198 +R L+LVKG VPGA Sbjct: 182 AERNLLLVKGGVPGA 196 >gi|326773963|ref|ZP_08233245.1| 50S ribosomal protein L3 [Actinomyces viscosus C505] gi|326636102|gb|EGE37006.1| 50S ribosomal protein L3 [Actinomyces viscosus C505] Length = 222 Score = 168 bits (425), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 89/209 (42%), Positives = 127/209 (60%), Gaps = 2/209 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ KLGMT +++ G PVTV+ +D V RT++ +GY AVQ+ G+ V+KP Sbjct: 16 LLGTKLGMTQIWDENGVLRPVTVVRVDTNVVTQVRTIETDGYEAVQLAFGDIDASKVTKP 75 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + G F+ V P++ + E R + P G + F VGQLVDVTG + GKGF+G M Sbjct: 76 LAGHFAKAGVEPRRHVAEIRTSLASEFTP-GQELAADTFEVGQLVDVTGTSKGKGFAGVM 134 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH F G+ A+HG +HR GS G PGR+FK +MAGRMG R TV+NL++ +D Sbjct: 135 KRHGFAGVGASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGHARRTVQNLKIRGIDV 194 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +G++LV G +PG K S ++VR + K A Sbjct: 195 DKGVLLVNGAIPG-PKGSVVVVRTAVKGA 222 >gi|167748430|ref|ZP_02420557.1| hypothetical protein ANACAC_03174 [Anaerostipes caccae DSM 14662] gi|317472037|ref|ZP_07931369.1| 50S ribosomal protein L3 [Anaerostipes sp. 3_2_56FAA] gi|167652422|gb|EDR96551.1| hypothetical protein ANACAC_03174 [Anaerostipes caccae DSM 14662] gi|316900441|gb|EFV22423.1| 50S ribosomal protein L3 [Anaerostipes sp. 3_2_56FAA] Length = 209 Score = 168 bits (425), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 127/212 (59%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ K+GMT ++N +G PVTVL C V +T + +GY AVQVG + K K+ Sbjct: 1 MKKAILTTKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTEENDGYEAVQVGFADKKEKS 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G F V+PKK + EF+ + + VG F G +D T + GKG+ Sbjct: 61 VNKPEKGHFDKAGVAPKKFVREFKFENASEYT-VGQEIKADIFEAGDKIDATATSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH THG S HR GS G DP +VFK KKM G+MG RVT++NLEVV Sbjct: 120 AGGIKRHGLSTGPKTHG-SKYHRHAGSNGMASDPSKVFKGKKMPGQMGSERVTIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + +ILVKG VPG KK S +++++S K+ Sbjct: 179 KVDAENNIILVKGAVPGPKK-SLVMLKESVKA 209 >gi|296423844|ref|XP_002841462.1| hypothetical protein [Tuber melanosporum Mel28] gi|295637702|emb|CAZ85653.1| unnamed protein product [Tuber melanosporum] Length = 306 Score = 168 bits (425), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 89/199 (44%), Positives = 124/199 (62%), Gaps = 1/199 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GV+A K GMT +Y GRRI TVL L+ QV +T K+GY AVQVG+G NV Sbjct: 76 RTGVLAVKKGMTAIYKPSGRRIACTVLQLERVQVTAVKTRQKHGYWAVQVGSGWRNSNNV 135 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 ++PM G F++ V+PK+ L EFRV+ + L+ G+ S +F GQ VDV G+GF+ Sbjct: 136 TRPMLGHFATAGVAPKEHLREFRVKDETGLMEPGTALSADFFVEGQYVDVRANCKGRGFA 195 Query: 122 GAMKRHNFGGLRATHGVSISHRS-HGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G MKRH F G A+HG S+SHR+ + + RV K+M GRMGG+RVT + +++ Sbjct: 196 GGMKRHGFSGQPASHGNSLSHRAMGSAGQSQGGGSRVLPGKRMPGRMGGHRVTRPHAQIM 255 Query: 181 SVDDKRGLILVKGCVPGAK 199 ++ + G IL+ G VPG K Sbjct: 256 EINKELGTILLFGPVPGPK 274 >gi|269955435|ref|YP_003325224.1| 50S ribosomal protein L3 [Xylanimonas cellulosilytica DSM 15894] gi|269304116|gb|ACZ29666.1| ribosomal protein L3 [Xylanimonas cellulosilytica DSM 15894] Length = 217 Score = 168 bits (425), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 89/211 (42%), Positives = 129/211 (61%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 + V+ +KLGMT +++ GR +PVTV+ +D V RT + +GY AVQ+ G+ + V+ Sbjct: 9 TAVLGKKLGMTQLWDEAGRLVPVTVVAVDTNVVTQVRTTETDGYSAVQLAVGQIDPRKVT 68 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 +P++G F V+P++ + E R D VG + + F G +VDV+G T GKG +G Sbjct: 69 QPLKGHFEKAGVTPRRHVAEIRT-ADASTYTVGQEITAAAFEAGAVVDVSGTTKGKGTAG 127 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G P RVFK +MAGRMG R T +NL V +V Sbjct: 128 VMKRHGFAGVGASHGSHRNHRKPGSIGGASTPSRVFKGLRMAGRMGNARQTTQNLTVHAV 187 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+LVKG VPG K ++V+ + K A Sbjct: 188 DAEKGLLLVKGAVPG-PKGGVVVVKTAAKGA 217 >gi|313895368|ref|ZP_07828925.1| 50S ribosomal protein L3 [Selenomonas sp. oral taxon 137 str. F0430] gi|312976263|gb|EFR41721.1| 50S ribosomal protein L3 [Selenomonas sp. oral taxon 137 str. F0430] Length = 217 Score = 168 bits (425), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 99/219 (45%), Positives = 132/219 (60%), Gaps = 5/219 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ RKLGMT ++ EGR +PVTV+ N V+ ++T + +GY AVQ+G G+ K KN Sbjct: 1 MAKAILGRKLGMTQIFTEEGRVVPVTVVESGNNLVLRNKTNETDGYNAVQIGFGDVKEKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F V + + E R+ + VG F G LVDV G + GKGF Sbjct: 61 VTKPLKGQFEKAGVKAVRFIREMRLSAPSE-YNVGDTIGVDIFAEGDLVDVVGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCR-QDP-GRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KRHNF HG S SHR GSTG P GRV K KK+ GRMGG RVTV+ L Sbjct: 120 AGGIKRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLT 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 VV VD R LIL+KG +PG KK +++++D+ K A K Sbjct: 179 VVRVDTDRNLILIKGAIPGPKK-GFVVIKDTVKPAKAAK 216 >gi|116671521|ref|YP_832454.1| 50S ribosomal protein L3 [Arthrobacter sp. FB24] gi|171855202|sp|A0JZ84|RL3_ARTS2 RecName: Full=50S ribosomal protein L3 gi|116611630|gb|ABK04354.1| LSU ribosomal protein L3P [Arthrobacter sp. FB24] Length = 216 Score = 168 bits (425), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 92/210 (43%), Positives = 125/210 (59%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ + IPVTV+ D+ + R D +GY+AVQ+G G+ + V+K Sbjct: 9 GLLGTKLGMTQVWDENNKLIPVTVVQADSNVITQLRNADVDGYVAVQIGYGQIDPRKVTK 68 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+P++ + E R D +G S F GQ +DV G T GKGF+G Sbjct: 69 PLAGHFEKAGVTPRRHVVELRT-ADAAEYELGQELSVEVFEAGQKIDVVGTTKGKGFAGV 127 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G+ A+HG +HR GS G P RVFK KMAGRMG R T NL V +VD Sbjct: 128 MKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGMKMAGRMGAVRHTTLNLTVHAVD 187 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++ L+L+KG VPGA + +LVR + K A Sbjct: 188 VEKSLLLIKGAVPGA-RGQVVLVRTAVKGA 216 >gi|24371829|ref|NP_715871.1| 50S ribosomal protein L3 [Shewanella oneidensis MR-1] gi|113968544|ref|YP_732337.1| 50S ribosomal protein L3 [Shewanella sp. MR-4] gi|114045707|ref|YP_736257.1| 50S ribosomal protein L3 [Shewanella sp. MR-7] gi|117918657|ref|YP_867849.1| 50S ribosomal protein L3 [Shewanella sp. ANA-3] gi|42559642|sp|Q8EK68|RL3_SHEON RecName: Full=50S ribosomal protein L3 gi|122945060|sp|Q0I0A5|RL3_SHESR RecName: Full=50S ribosomal protein L3 gi|123325489|sp|Q0HNT7|RL3_SHESM RecName: Full=50S ribosomal protein L3 gi|166234595|sp|A0KRM4|RL3_SHESA RecName: Full=50S ribosomal protein L3 gi|24345642|gb|AAN53316.1|AE015473_3 ribosomal protein L3 [Shewanella oneidensis MR-1] gi|113883228|gb|ABI37280.1| LSU ribosomal protein L3P [Shewanella sp. MR-4] gi|113887149|gb|ABI41200.1| LSU ribosomal protein L3P [Shewanella sp. MR-7] gi|117610989|gb|ABK46443.1| LSU ribosomal protein L3P [Shewanella sp. ANA-3] Length = 212 Score = 168 bits (425), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 92/206 (44%), Positives = 126/206 (61%), Gaps = 1/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G IPVTV+ + +V +TL+ +GY A+QV G K Sbjct: 1 MAIGLIGRKVGMTRIFTEDGVSIPVTVIEVAGNRVTQVKTLETDGYRALQVTTGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G F+ V + L+E R+ + + + VG+ + F VDVTG + GKG Sbjct: 61 ITKPEAGHFAKSGVEAGRGLWELRLADGEGEGIEVGAELNVGIFADVAKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF THG S+SHRS+GS G Q PGRVFK KKM+G MG RVT +NL+V Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205 V VD +R L+LVKG VPGA I+ Sbjct: 181 VRVDVERNLLLVKGAVPGATNGDLII 206 >gi|157372776|ref|YP_001480765.1| 50S ribosomal protein L3 [Serratia proteamaculans 568] gi|166990940|sp|A8GKJ7|RL3_SERP5 RecName: Full=50S ribosomal protein L3 gi|157324540|gb|ABV43637.1| ribosomal protein L3 [Serratia proteamaculans 568] Length = 209 Score = 168 bits (425), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 93/202 (46%), Positives = 125/202 (61%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +KLGMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+K Sbjct: 3 GLVGKKLGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTTGSKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR + ++ G S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRTAEGEEFT-AGQNISVEIFAEVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG +G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGGNLIV 203 >gi|123444098|ref|YP_001008068.1| 50S ribosomal protein L3 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|238752687|ref|ZP_04614158.1| 50S ribosomal protein L3 [Yersinia rohdei ATCC 43380] gi|238783169|ref|ZP_04627195.1| 50S ribosomal protein L3 [Yersinia bercovieri ATCC 43970] gi|238788910|ref|ZP_04632700.1| 50S ribosomal protein L3 [Yersinia frederiksenii ATCC 33641] gi|238797238|ref|ZP_04640739.1| 50S ribosomal protein L3 [Yersinia mollaretii ATCC 43969] gi|332163259|ref|YP_004299836.1| 50S ribosomal protein L3 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|166234608|sp|A1JS47|RL3_YERE8 RecName: Full=50S ribosomal protein L3 gi|122091059|emb|CAL13942.1| 50S ribosomal protein L3 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|238709114|gb|EEQ01361.1| 50S ribosomal protein L3 [Yersinia rohdei ATCC 43380] gi|238715965|gb|EEQ07951.1| 50S ribosomal protein L3 [Yersinia bercovieri ATCC 43970] gi|238718875|gb|EEQ10690.1| 50S ribosomal protein L3 [Yersinia mollaretii ATCC 43969] gi|238722937|gb|EEQ14587.1| 50S ribosomal protein L3 [Yersinia frederiksenii ATCC 33641] gi|318607744|emb|CBY29242.1| LSU ribosomal protein L3p (L3e) [Yersinia enterocolitica subsp. palearctica Y11] gi|325667489|gb|ADZ44133.1| 50S ribosomal protein L3 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330861855|emb|CBX72026.1| 50S ribosomal protein L3 [Yersinia enterocolitica W22703] Length = 209 Score = 168 bits (425), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 92/202 (45%), Positives = 127/202 (62%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V ++L+ +GY AVQV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYRAVQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ + + G S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLPEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG +G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGGNLIV 203 >gi|269468075|gb|EEZ79789.1| ribosomal protein L3 [uncultured SUP05 cluster bacterium] Length = 278 Score = 168 bits (425), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 97/206 (47%), Positives = 130/206 (63%), Gaps = 9/206 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQV--GA----- 53 M G+V +KLGMT + + +G V+V+ ++ +VV RT + +GY AVQV GA Sbjct: 1 MAIGLVGQKLGMTRIMSEDGSATAVSVIKIEANRVVQTRTTEVDGYSAVQVTTGAKVNKK 60 Query: 54 GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113 GEAKV+ V ++G ++ + L+EFR D + + S F S F G VDVTG Sbjct: 61 GEAKVRRVPSAIKGHYAKASQDIGLGLWEFRA--DANEIGDASSFDLSIFGAGHYVDVTG 118 Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 + GKGF G +KRHNF ATHG SISHR+ GSTG Q+PGRVFK KKMAG MG +VT Sbjct: 119 QSKGKGFQGGVKRHNFQMQDATHGNSISHRAIGSTGQCQEPGRVFKGKKMAGHMGDEQVT 178 Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAK 199 + LE++ VD +R L+LVKG +PG+K Sbjct: 179 EECLEIIRVDSERNLLLVKGAIPGSK 204 >gi|188535279|ref|YP_001909076.1| 50S ribosomal protein L3 [Erwinia tasmaniensis Et1/99] gi|226725174|sp|B2VK65|RL3_ERWT9 RecName: Full=50S ribosomal protein L3 gi|188030321|emb|CAO98210.1| 50S ribosomal protein L3 [Erwinia tasmaniensis Et1/99] Length = 209 Score = 167 bits (424), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 91/202 (45%), Positives = 127/202 (62%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L+ +GY A+QV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKGLENDGYTAIQVTTGAKKASRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR + + VG + F + VDVTG + GKGF+G Sbjct: 63 PAAGHFAKAGVEAGRGLWEFRTAEGAEFT-VGQSINVDIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|297625782|ref|YP_003687545.1| 50S ribosomal protein L3 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921547|emb|CBL56101.1| 50S ribosomal protein L3 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 224 Score = 167 bits (424), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 94/208 (45%), Positives = 124/208 (59%), Gaps = 2/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT +++ R +PVTV+ C V RT D +GY AVQ+G G + K+V+K Sbjct: 14 GLLGTKLGMTQLWDENNRLVPVTVIQAGPCVVTQVRTPDTDGYSAVQLGYGAIRAKSVTK 73 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V+P+K L E R D +G P F +VDVTG+T GKG +G Sbjct: 74 PAAGQFARAKVTPRKYLAEIRTS-DASEYTLGQELGPDTFRTDDVVDVTGVTKGKGTAGV 132 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR F GL A+HGV HRS G G PG VFK +MAGRMG R TV+NL V VD Sbjct: 133 VKRWGFKGLGASHGVHRKHRSPGGIGACATPGHVFKGLRMAGRMGNARKTVQNLAVAGVD 192 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 +GLILV+G VPG K + +++R + K Sbjct: 193 ADKGLILVRGAVPG-NKGALVVLRTAAK 219 >gi|259909999|ref|YP_002650355.1| 50S ribosomal protein L3 [Erwinia pyrifoliae Ep1/96] gi|292489849|ref|YP_003532739.1| 50S ribosomal protein L3 [Erwinia amylovora CFBP1430] gi|292900891|ref|YP_003540260.1| 50S ribosomal protein L3 [Erwinia amylovora ATCC 49946] gi|224965621|emb|CAX57153.1| 50S ribosomal protein L3 [Erwinia pyrifoliae Ep1/96] gi|283480096|emb|CAY76012.1| 50S ribosomal protein L3 [Erwinia pyrifoliae DSM 12163] gi|291200739|emb|CBJ47872.1| 50S ribosomal subunit protein L3 [Erwinia amylovora ATCC 49946] gi|291555286|emb|CBA23589.1| 50S ribosomal protein L3 [Erwinia amylovora CFBP1430] gi|310765598|gb|ADP10548.1| 50S ribosomal protein L3 [Erwinia sp. Ejp617] gi|312174031|emb|CBX82284.1| 50S ribosomal protein L3 [Erwinia amylovora ATCC BAA-2158] Length = 209 Score = 167 bits (424), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 91/202 (45%), Positives = 127/202 (62%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L+ +GY A+QV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKGLENDGYTAIQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR + + VG + F + VDVTG + GKGF+G Sbjct: 63 PAAGHFAKAGVEAGRGLWEFRTAEGAEFT-VGQSINVDIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|238928155|ref|ZP_04659915.1| ribosomal protein L3 [Selenomonas flueggei ATCC 43531] gi|238884115|gb|EEQ47753.1| ribosomal protein L3 [Selenomonas flueggei ATCC 43531] Length = 220 Score = 167 bits (424), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 98/215 (45%), Positives = 131/215 (60%), Gaps = 5/215 (2%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RKLGMT ++ EGR +PVTV+ N V+ +T++ +GY AVQ+G G+ K KNV+KP Sbjct: 8 ILGRKLGMTQIFTEEGRVVPVTVVESGNNFVLRSKTVESDGYNAVQIGFGDIKEKNVTKP 67 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 ++G F V + + E R+ + VG F G LVDV G + GKGF+G + Sbjct: 68 LKGQFEKAGVKAVRFIREMRLSAPSE-YNVGDTIGVDIFAAGDLVDVVGTSKGKGFAGGI 126 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCR-QDP-GRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 KRHNF HG S SHR GSTG P GRV K KK+ GRMGG RVTV+ L VV V Sbjct: 127 KRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLTVVRV 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 D R LIL+KG +PG KK +++++D+ K A K Sbjct: 186 DADRNLILIKGAIPGPKKG-FVVIKDTVKPAKAAK 219 >gi|260886876|ref|ZP_05898139.1| 50S ribosomal protein L3 [Selenomonas sputigena ATCC 35185] gi|330839326|ref|YP_004413906.1| 50S ribosomal protein L3 [Selenomonas sputigena ATCC 35185] gi|260863475|gb|EEX77975.1| 50S ribosomal protein L3 [Selenomonas sputigena ATCC 35185] gi|329747090|gb|AEC00447.1| 50S ribosomal protein L3 [Selenomonas sputigena ATCC 35185] Length = 219 Score = 167 bits (424), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 97/213 (45%), Positives = 131/213 (61%), Gaps = 5/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ RKLGMT ++ EG +PVTV+ N V++++T++ +GY AVQ+G GE K K Sbjct: 1 MSKAILGRKLGMTQIFTEEGTVVPVTVVESGNNVVIMNKTVENDGYNAVQIGFGEVKEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F+ V+P + + E R+ D VG F G LVDVTG + GKGF Sbjct: 61 VTKPLKGHFAKAGVAPVRFIREMRLT-DASEYNVGDTIGVDIFAAGDLVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KRHNF HG S SHR GSTG GRV K KK+ G+MG RVTV+ L Sbjct: 120 AGTIKRHNFARGPMGHG-SKSHREPGSTGAMISGHGGRVLKGKKLPGQMGHARVTVQRLS 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VV VD +R LIL+KG +PG KK ++VR + K Sbjct: 179 VVRVDAERNLILIKGAIPGPKK-GLVVVRATVK 210 >gi|163783267|ref|ZP_02178260.1| elongation factor Tu [Hydrogenivirga sp. 128-5-R1-1] gi|159881375|gb|EDP74886.1| elongation factor Tu [Hydrogenivirga sp. 128-5-R1-1] Length = 236 Score = 167 bits (424), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 96/200 (48%), Positives = 124/200 (62%), Gaps = 1/200 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GV+ RKLGMT V+ +G +PVTV+ + VV ++ +K+GY AVQVGA EAK K+ Sbjct: 1 MGIGVIGRKLGMTRVFTSDGTAVPVTVIQVPANYVVQVKSPEKDGYSAVQVGAVEAKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+ G FS NV + L EFRV D + F G LVDV G + G+GF Sbjct: 61 LTKPLMGHFSKKNVKLLRYLKEFRVDNTQDYQEGQELKLEEVFKPGDLVDVVGTSKGRGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR +FGG +HG HR+ GS G R DPGRV+K KKMAG G ++ V++L VV Sbjct: 121 AGTMKRWDFGGFPKSHGHRY-HRAVGSIGNRTDPGRVWKGKKMAGHWGAEKIRVQSLLVV 179 Query: 181 SVDDKRGLILVKGCVPGAKK 200 V + GLILVKG VPG K Sbjct: 180 DVIPEEGLILVKGSVPGPNK 199 >gi|95931442|ref|ZP_01314148.1| ribosomal protein L3 [Desulfuromonas acetoxidans DSM 684] gi|95132510|gb|EAT14203.1| ribosomal protein L3 [Desulfuromonas acetoxidans DSM 684] Length = 210 Score = 167 bits (424), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 96/215 (44%), Positives = 131/215 (60%), Gaps = 9/215 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M +G++ +KLGMT ++ G RIPVTV+ C VV + +D +GY AVQ+G GE K Sbjct: 2 MVNGILGKKLGMTQIFTESGMRIPVTVIEAGPCTVVQKKVVDTDGYDAVQLGFGEQKAHR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGS-VFSPSYFTVGQLVDVTGMTIG 117 ++KP G F K +F + D ++ L VG+ + F+ G +VDV G + G Sbjct: 62 INKPKMGHFKKAG----KGVFASLREMDGEIAELEVGAEIVCGDVFSAGDIVDVMGTSKG 117 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF G MKR NF G R+THG S HR+ G+ GC P RVFK KKMAG+MG RVT++NL Sbjct: 118 KGFQGVMKRWNFSGGRSTHG-SKFHRAPGAIGCSAWPSRVFKGKKMAGQMGNERVTIQNL 176 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 E+V V + LILVKG +PG KN + +R + K+ Sbjct: 177 EIVDVRADQNLILVKGAIPGP-KNGLVTIRKAIKA 210 >gi|238061121|ref|ZP_04605830.1| 50S ribosomal protein L3 rplC [Micromonospora sp. ATCC 39149] gi|57547707|gb|AAW52546.1| RplC [Micromonospora sp. ATCC 39149] gi|237882932|gb|EEP71760.1| 50S ribosomal protein L3 rplC [Micromonospora sp. ATCC 39149] Length = 223 Score = 167 bits (423), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 90/204 (44%), Positives = 126/204 (61%), Gaps = 3/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ + +PVTV+ C V R+ +K+GY AVQ+ G + V K Sbjct: 7 GILGAKLGMTQVWD-NNKVVPVTVVQAGPCVVSQVRSAEKDGYSAVQLAYGTIDPRKVKK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G ++ +V+P++ + E R D +G + F G +DVTG T GKG++G Sbjct: 66 PVSGHYAKADVAPRRHIVELRTTDAADY-SLGQEVTVEQFPAGVTIDVTGKTKGKGYAGP 124 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GLRA+HGV HRS GS G PGRVFK +MAGRMGG R TV+NL V ++D Sbjct: 125 MKRHGFHGLRASHGVERKHRSPGSIGACATPGRVFKGTRMAGRMGGVRYTVQNLTVQAID 184 Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207 + L+LV+G +PG K + +LVR Sbjct: 185 TENNLLLVRGAIPGP-KGALVLVR 207 >gi|269837066|ref|YP_003319294.1| 50S ribosomal protein L3 [Sphaerobacter thermophilus DSM 20745] gi|269786329|gb|ACZ38472.1| ribosomal protein L3 [Sphaerobacter thermophilus DSM 20745] Length = 216 Score = 167 bits (423), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 130/213 (61%), Gaps = 9/213 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT ++N G+ IPVTVL + C V +T +++GY AVQ+G G K Sbjct: 1 MIHGLLGKKLGMTQIFNEAGQAIPVTVLEVGPCVVTQVKTRERDGYEAVQLGFGHKK--R 58 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118 +++P RG + P+ R K D++ VG V S F G+ VDVTG + G+ Sbjct: 59 LNQPERGHLRASGAQPRY----LREVKADNIEEYSVGQVIDCSVFKEGERVDVTGTSKGR 114 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF+G MKRH FGG ATHG S R+ GS G PGRVFK +MAG MG RVTV+NLE Sbjct: 115 GFAGVMKRHGFGGGPATHGQSDRKRAPGSIGASATPGRVFKGLRMAGHMGNQRVTVQNLE 174 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VV VD +R ++LV+G VPGA +LVR + K Sbjct: 175 VVRVDPERNVVLVRGSVPGA-NGQLVLVRRAVK 206 >gi|325964166|ref|YP_004242072.1| 50S ribosomal protein L3P [Arthrobacter phenanthrenivorans Sphe3] gi|323470253|gb|ADX73938.1| LSU ribosomal protein L3P [Arthrobacter phenanthrenivorans Sphe3] Length = 216 Score = 167 bits (423), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 91/210 (43%), Positives = 125/210 (59%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ + IPVTV+ D+ + R + +GY+AVQ+G G+ + V+K Sbjct: 9 GLLGTKLGMTQVWDENNKLIPVTVVQADSNVITQLRNAEADGYVAVQIGYGQIDPRKVTK 68 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+P++ + E R D +G S F GQ +DV G T GKGF+G Sbjct: 69 PLAGHFEKAGVTPRRHVVELRT-ADAAEYELGQELSVEVFEAGQKIDVIGTTKGKGFAGV 127 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G+ A+HG +HR GS G P RVFK KMAGRMG R T NL V +VD Sbjct: 128 MKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGMKMAGRMGAVRHTTLNLTVHAVD 187 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++ L+L+KG VPGA + +LVR + K A Sbjct: 188 VEKSLLLIKGAVPGA-RGQVVLVRTAVKGA 216 >gi|77359116|ref|YP_338691.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas haloplanktis TAC125] gi|109893540|sp|Q3IF25|RL3_PSEHT RecName: Full=50S ribosomal protein L3 gi|76874027|emb|CAI85248.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas haloplanktis TAC125] Length = 211 Score = 167 bits (423), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 91/198 (45%), Positives = 120/198 (60%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ ++ ++ +GY A+QV AG K Sbjct: 1 MALGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRIAQIKSEATDGYNALQVTAGTKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ V + L+EFR+ + VG+ + F VDVTG + GKGF Sbjct: 61 VNKASAGHFAKAGVEAGRGLWEFRLNGGEGDFEVGAELTVELFNEINKVDVTGTSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG MG RVT +NLE+V Sbjct: 121 QGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGHMGAERVTTQNLELV 180 Query: 181 SVDDKRGLILVKGCVPGA 198 VD +R L+LVKG VPGA Sbjct: 181 RVDAERNLLLVKGAVPGA 198 >gi|148263140|ref|YP_001229846.1| 50S ribosomal protein L3 [Geobacter uraniireducens Rf4] gi|189042846|sp|A5GAW5|RL3_GEOUR RecName: Full=50S ribosomal protein L3 gi|146396640|gb|ABQ25273.1| LSU ribosomal protein L3P [Geobacter uraniireducens Rf4] Length = 211 Score = 167 bits (423), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 94/212 (44%), Positives = 127/212 (59%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT ++ +GRRIPVTV+ C V+ +T +K+GY A+QVG + Sbjct: 1 MNKGLIGKKLGMTQIFAEDGRRIPVTVVEAGPCVVIQKKTKEKDGYSAIQVGFNSQEAAK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + + G + L E RV + D VG V S F G LVDVTG +IGKGF Sbjct: 61 ANSAVVGHCKTAGSGVFSFLRELRVD-NADQYSVGDVLSAEIFAPGDLVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G MKR F G RA+HG S HR+ GS GC P RVFKNKKM G++G +VTV+ L++V Sbjct: 120 QGVMKRWGFKGGRASHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQLGNEKVTVQRLKIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD LIL+ G +PG+ N +L++DS K+ Sbjct: 179 RVDAADNLILLNGAIPGS-TNGLVLIKDSVKA 209 >gi|317065030|ref|ZP_07929515.1| LSU ribosomal protein L3P [Fusobacterium ulcerans ATCC 49185] gi|313690706|gb|EFS27541.1| LSU ribosomal protein L3P [Fusobacterium ulcerans ATCC 49185] Length = 213 Score = 167 bits (423), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 91/209 (43%), Positives = 134/209 (64%), Gaps = 3/209 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++A+K+GMT ++ +G+ IPVTV+ V+ +T++ +GY A+Q+G E K KN + Sbjct: 7 SGILAKKIGMTQIFE-DGKFIPVTVVEAGPNYVLQKKTVENDGYTALQLGFDEKKEKNTT 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F V+P++ + E RV + +G + VD+TG + GKG +G Sbjct: 66 KPIMGIFKKAGVNPQRFVKELRVDSVEGF-ELGQEIKADVLAEVEYVDITGTSKGKGTAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF G RA+HGVS +HR GS G PG+V + KKMAG+ G VTV+NL+VV V Sbjct: 125 VMKRHNFAGNRASHGVSRNHRLGGSIGMSSWPGKVLRGKKMAGQYGNATVTVQNLKVVKV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D + L+L+KG VPG+ KNS+I+V+ + K Sbjct: 185 DVENNLLLIKGAVPGS-KNSYIVVKPAVK 212 >gi|260579267|ref|ZP_05847151.1| 50S ribosomal protein L3 [Corynebacterium jeikeium ATCC 43734] gi|258602619|gb|EEW15912.1| 50S ribosomal protein L3 [Corynebacterium jeikeium ATCC 43734] Length = 218 Score = 167 bits (423), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 91/213 (42%), Positives = 125/213 (58%), Gaps = 2/213 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT +++ E R +PVTV+ C V RT + +GY AVQ+ GE + V+K Sbjct: 8 GILGKKLGMTQIFDEENRVVPVTVVEAGPCVVTQVRTKETDGYEAVQIAFGEIDPRKVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ + E RV D VG + F + VDVTG T GKG++G Sbjct: 68 PAAGHFKKAGVTPRRHVAEIRVA-DASSYEVGQDVTVDIFNDVKFVDVTGTTKGKGYAGG 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G A HG +HR GS G PGRVFK K+MAGRMG +RVT +NL+V VD Sbjct: 127 MKRHGFAGQGAAHGNQAAHRRVGSIGQAATPGRVFKGKRMAGRMGNDRVTQQNLKVAKVD 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 + L+L+KG VPG ++V+ + K + Sbjct: 187 AESNLLLIKGAVPGV-NGGLVVVKTAVKGGAHA 218 >gi|238758764|ref|ZP_04619938.1| 50S ribosomal protein L3 [Yersinia aldovae ATCC 35236] gi|238703061|gb|EEP95604.1| 50S ribosomal protein L3 [Yersinia aldovae ATCC 35236] Length = 209 Score = 167 bits (423), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 93/202 (46%), Positives = 125/202 (61%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTTGSKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ + + G S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLAEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG MG RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHMGDERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGGNLIV 203 >gi|297571935|ref|YP_003697709.1| 50S ribosomal protein L3 [Arcanobacterium haemolyticum DSM 20595] gi|296932282|gb|ADH93090.1| 50S ribosomal protein L3 [Arcanobacterium haemolyticum DSM 20595] Length = 222 Score = 167 bits (423), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 87/205 (42%), Positives = 123/205 (60%), Gaps = 2/205 (0%) Query: 9 KLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGF 68 KLGMT V++ + +PVTV+ + V RT + +GY AVQ+ +GE K KNV+KP++G Sbjct: 20 KLGMTQVWDENAKLVPVTVVRVGKNVVTQVRTPEIDGYSAVQIASGELKAKNVTKPLKGH 79 Query: 69 FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128 F V P++ + E R +D +G F GQ +DV G + GKGF+G MKRH Sbjct: 80 FEKAGVEPRRHVAEIRTVDAEDYT-LGQELGVETFEAGQTIDVIGKSKGKGFAGVMKRHG 138 Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188 F G+ A+HG +HR GS G P RVF+ +MAGRMG RVTV+NL + ++D + L Sbjct: 139 FAGVSASHGAHRNHRKPGSIGACSTPSRVFRGMRMAGRMGNARVTVQNLTIHAIDTENNL 198 Query: 189 ILVKGCVPGAKKNSWILVRDSFKSA 213 ILV G +PG K +++R + K A Sbjct: 199 ILVSGAIPG-NKGGVVVIRTAVKGA 222 >gi|221069450|ref|ZP_03545555.1| ribosomal protein L3 [Comamonas testosteroni KF-1] gi|264676442|ref|YP_003276348.1| ribosomal protein L3 [Comamonas testosteroni CNB-2] gi|299531236|ref|ZP_07044647.1| 50S ribosomal protein L3 [Comamonas testosteroni S44] gi|220714473|gb|EED69841.1| ribosomal protein L3 [Comamonas testosteroni KF-1] gi|262206954|gb|ACY31052.1| ribosomal protein L3 [Comamonas testosteroni CNB-2] gi|298720819|gb|EFI61765.1| 50S ribosomal protein L3 [Comamonas testosteroni S44] Length = 224 Score = 167 bits (423), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 92/216 (42%), Positives = 130/216 (60%), Gaps = 13/216 (6%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G +PVTV+ + N +V +T + +GY+A+QV G K V+K Sbjct: 8 GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVALQVTFGARKASRVTK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDD-------LLPVGSVFSPSYFTVGQLVDVTGMTI 116 P G + V + EFRV + +LPV +FS VGQ VDV G +I Sbjct: 68 PQAGHLAKAGVEAGEVTREFRVTDETAGKYAAGAVLPVAELFS-----VGQKVDVQGTSI 122 Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 GKG++G +KRHNF RA+HG S SH GS G QDPGRVF K+M G MG VT +N Sbjct: 123 GKGYAGTIKRHNFSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTTQN 182 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 L+VV +D+ R L+L+KG +PGA K ++ VR + K+ Sbjct: 183 LDVVRIDEARQLLLIKGAIPGA-KGGFVSVRPAIKA 217 >gi|296130495|ref|YP_003637745.1| 50S ribosomal protein L3 [Cellulomonas flavigena DSM 20109] gi|296022310|gb|ADG75546.1| 50S ribosomal protein L3 [Cellulomonas flavigena DSM 20109] Length = 219 Score = 167 bits (423), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 91/211 (43%), Positives = 127/211 (60%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 + ++ KLGMT V++ GR +PVTVL + V R+ + +GY AVQ+ G+ + V+ Sbjct: 11 TALLGTKLGMTQVWDEAGRLVPVTVLAVGTNVVTQVRSAESDGYAAVQLAYGQIDPRKVT 70 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F V+P++ + E R + +G + F GQ+VDVTG T GKG +G Sbjct: 71 KPLKGHFEKAGVTPRRHVAEIRTSNAAEFT-LGQEITAGAFEAGQVVDVTGTTKGKGTAG 129 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G P RVFK KMAGRMG R T +NL V +V Sbjct: 130 VMKRHGFHGVGASHGAHRNHRKPGSIGGASTPSRVFKGLKMAGRMGVARQTTQNLTVHAV 189 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+LVKG VPG K ++VR + K A Sbjct: 190 DAEKGLLLVKGAVPG-PKGGVVVVRSAVKGA 219 >gi|160895840|ref|YP_001561422.1| 50S ribosomal protein L3 [Delftia acidovorans SPH-1] gi|226725161|sp|A9BPR8|RL3_DELAS RecName: Full=50S ribosomal protein L3 gi|160361424|gb|ABX33037.1| ribosomal protein L3 [Delftia acidovorans SPH-1] Length = 224 Score = 167 bits (423), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 92/216 (42%), Positives = 131/216 (60%), Gaps = 13/216 (6%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G +PVTV+ + N +V +T + +GY+A+QV G K V+K Sbjct: 8 GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVALQVTFGSRKASRVTK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-------DLLPVGSVFSPSYFTVGQLVDVTGMTI 116 P G + V + + EFRV ++ +LPV +FS VGQ VDV G +I Sbjct: 68 PEAGHLAKAGVEAGEVMGEFRVTEETAGKYAAGSVLPVAELFS-----VGQKVDVQGTSI 122 Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 GKGF+G +KRHNF RA+HG S SH GS QDPGRVF KKM G MG +T +N Sbjct: 123 GKGFAGTIKRHNFRSQRASHGNSRSHNVPGSISMAQDPGRVFPGKKMTGHMGDETITTQN 182 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 L+VV +D+ R L+L+KG VPG+ K ++ VR + K+ Sbjct: 183 LDVVRIDEARQLLLIKGAVPGS-KGGFVTVRPAIKA 217 >gi|325282640|ref|YP_004255181.1| 50S ribosomal protein L3 [Deinococcus proteolyticus MRP] gi|324314449|gb|ADY25564.1| 50S ribosomal protein L3 [Deinococcus proteolyticus MRP] Length = 206 Score = 167 bits (423), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 93/195 (47%), Positives = 118/195 (60%), Gaps = 6/195 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ K+GMT ++ + R +PVTV+ C VV +T + +GY AVQ+G G+ K K ++K Sbjct: 3 GILGTKIGMTQIWK-DDRAVPVTVILAGPCPVVQRKTNEVDGYEAVQIGFGDRKEKGLNK 61 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G ++SP + L EFR D P G F G+ +DVTG + GKGF G Sbjct: 62 PQLGHLKKADISPVRYLREFR-----DFSPEGDEVRVDVFGEGEKIDVTGTSKGKGFQGV 116 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR NF G A+HG HR GS G R+ PGRV+K KKMAG MG RVTV+NLEVV V Sbjct: 117 MKRWNFAGGPASHGAKKWHRRPGSIGQRKTPGRVYKGKKMAGHMGDERVTVQNLEVVEVR 176 Query: 184 DKRGLILVKGCVPGA 198 LILVKG VPGA Sbjct: 177 PDENLILVKGAVPGA 191 >gi|260362276|ref|ZP_05775243.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus K5030] gi|308111331|gb|EFO48871.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus K5030] Length = 200 Score = 167 bits (423), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 89/189 (47%), Positives = 121/189 (64%), Gaps = 1/189 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ EG IPVTV+ ++ +V +TL+ +GY A+QV AG K V+K Sbjct: 3 GLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF GA Sbjct: 63 AEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELTVELFNETKKVDVTGTSKGKGFQGA 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKRGLILVK 192 +R L+L+K Sbjct: 182 AERNLLLIK 190 >gi|319443065|ref|ZP_07992221.1| 50S ribosomal protein L3 [Corynebacterium variabile DSM 44702] Length = 218 Score = 167 bits (423), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 85/194 (43%), Positives = 118/194 (60%), Gaps = 1/194 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT +++ E R +PVTV+ C V RT D +GY AVQ+ G+ + V K Sbjct: 8 GILGKKLGMTQIFDEENRVVPVTVVEAGPCVVTQVRTKDTDGYEAVQIAFGDIDPRKVKK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ + E RV+ D VG + F VDVTG + GKG++GA Sbjct: 68 PQAGHFKKAGVTPRRHVTEIRVE-DASAYEVGQDITAELFADVTFVDVTGTSKGKGYAGA 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G A+HG +HR G G PGRVFK +MAGRMG N+VT++NL++ VD Sbjct: 127 MKRHGFAGQGASHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGNNQVTLQNLKIARVD 186 Query: 184 DKRGLILVKGCVPG 197 + L+L+KG +PG Sbjct: 187 AESNLVLIKGAIPG 200 >gi|189424410|ref|YP_001951587.1| 50S ribosomal protein L3 [Geobacter lovleyi SZ] gi|226725181|sp|B3E7T5|RL3_GEOLS RecName: Full=50S ribosomal protein L3 gi|189420669|gb|ACD95067.1| ribosomal protein L3 [Geobacter lovleyi SZ] Length = 211 Score = 167 bits (423), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT ++ +G R+PVTV+ C V+ +T + +GY AVQVG Sbjct: 1 MNKGIIGKKLGMTQIFLEDGTRVPVTVVQAGPCVVLQKKTAEVDGYSAVQVGFETVNAAK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + RG + L E +++++ +L +G + F G L+DVTG +IGKGF Sbjct: 61 ANSADRGHCVKAGKGVFRHLRELKLEQEAEL-NIGDELTVQQFEPGDLIDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRHNF G RA+HG S HR+ GS GC P RVFKNKKM G+MG RVTV+ L+VV Sbjct: 120 QGVIKRHNFKGGRASHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQMGNERVTVQRLQVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + LIL+KG +P + KN+ ++++DS K+ Sbjct: 179 RVDADQNLILIKGAIPDS-KNNVVVIKDSVKA 209 >gi|309782834|ref|ZP_07677554.1| 50S ribosomal protein L3 [Ralstonia sp. 5_7_47FAA] gi|308918258|gb|EFP63935.1| 50S ribosomal protein L3 [Ralstonia sp. 5_7_47FAA] Length = 221 Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 92/207 (44%), Positives = 127/207 (61%), Gaps = 3/207 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTVL + + +V +T + +GY AVQV G + Sbjct: 5 MSLGLVGRKVGMTRIFTDDGDSIPVTVLEVGDNRVTQIKTDETDGYTAVQVTFGTRRASR 64 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQ--KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 V+KP+ G + V + + EFRV + + P G+ S F VGQ +DV G+TIGK Sbjct: 65 VTKPLAGHLAKAGVEAGEVIKEFRVDAARAAEFQP-GANISVDLFEVGQKIDVQGVTIGK 123 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG TV+NLE Sbjct: 124 GYAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLE 183 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWIL 205 + +D +R L+LVKG +PGAK I+ Sbjct: 184 IAKIDAERKLLLVKGAIPGAKGGQVIV 210 >gi|227115272|ref|ZP_03828928.1| 50S ribosomal protein L3 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 209 Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 92/202 (45%), Positives = 126/202 (62%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A QV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAAQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRTLREFRLSEGEEFT-VGQSISVEIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGSDLIV 203 >gi|283835737|ref|ZP_06355478.1| hypothetical protein CIT292_10129 [Citrobacter youngae ATCC 29220] gi|291068416|gb|EFE06525.1| 50S ribosomal protein L3 [Citrobacter youngae ATCC 29220] Length = 209 Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 93/195 (47%), Positives = 124/195 (63%), Gaps = 1/195 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ D + VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFTKAGVEAGRGLWEFRLA-DGEEYTVGQSISVELFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGA 198 +R L+LVKG VPGA Sbjct: 182 AERNLLLVKGGVPGA 196 >gi|161506006|ref|YP_001573118.1| 50S ribosomal protein L3 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189029478|sp|A9MN46|RL3_SALAR RecName: Full=50S ribosomal protein L3 gi|160867353|gb|ABX23976.1| hypothetical protein SARI_04187 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 209 Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 93/195 (47%), Positives = 125/195 (64%), Gaps = 1/195 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGVKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLAEGEEYT-VGQSISVELFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGA 198 +R L+LVKG VPGA Sbjct: 182 AERNLLLVKGGVPGA 196 >gi|309789667|ref|ZP_07684248.1| ribosomal protein L3 [Oscillochloris trichoides DG6] gi|308228403|gb|EFO82050.1| ribosomal protein L3 [Oscillochloris trichoides DG6] Length = 209 Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 93/212 (43%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M SG++ RKLGM V++ +G IPVTV+ C V RT++++GY AVQ+G + + + Sbjct: 1 MISGMLGRKLGMMQVFSDKGEVIPVTVIAAGPCIVTQVRTVERDGYAAVQIGYEQVEPRK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + N + L EF + P G V + F GQ +DV+G + G+GF Sbjct: 61 LTKPQQGHLKAANAM-LRYLREFPADNPQEHTP-GEVINVELFKPGQKIDVSGTSKGRGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH F G THG S HR+ GS G PGRV+K +KMAGRMGG RVT++NLEVV Sbjct: 119 AGVVKRHGFRGGPKTHGQSDRHRAPGSIGAGTTPGRVWKGQKMAGRMGGKRVTIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ LILVKG VPGA + + +R + K+ Sbjct: 179 EVLPEKNLILVKGSVPGA-RTGLLEIRRAVKA 209 >gi|154249817|ref|YP_001410642.1| 50S ribosomal protein L3 [Fervidobacterium nodosum Rt17-B1] gi|171769379|sp|A7HM52|RL3_FERNB RecName: Full=50S ribosomal protein L3 gi|154153753|gb|ABS60985.1| ribosomal protein L3 [Fervidobacterium nodosum Rt17-B1] Length = 207 Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 92/208 (44%), Positives = 129/208 (62%), Gaps = 4/208 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ARK+GMT ++ E + +PVTVL C VV +T++K+GY A+Q+G E K ++KP Sbjct: 4 IIARKVGMTRLWKDE-KVVPVTVLKAGPCVVVQKKTVEKDGYNAIQLGFEEVNEKKLTKP 62 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M G F NV P + L EFRV+ + D VG + + F G +D+TG T G+G+SGAM Sbjct: 63 MLGVFKKANVKPMRVLKEFRVE-NVDQYSVGQEITVAIFQEGDKIDITGWTKGRGYSGAM 121 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR NF G HG HR GS G +P R+FK K+M GR G RVT+ N EVV++D Sbjct: 122 KRWNFQGGPKAHGAKF-HRELGSVGQHTEPARIFKGKRMPGRYGNERVTILNSEVVTIDA 180 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212 + L+ VKG VPGA + S +++R + K Sbjct: 181 QNNLLAVKGGVPGA-RGSLVIIRSAVKQ 207 >gi|187930364|ref|YP_001900851.1| 50S ribosomal protein L3 [Ralstonia pickettii 12J] gi|241664532|ref|YP_002982892.1| 50S ribosomal protein L3 [Ralstonia pickettii 12D] gi|226730553|sp|B2UEL9|RL3_RALPJ RecName: Full=50S ribosomal protein L3 gi|187727254|gb|ACD28419.1| ribosomal protein L3 [Ralstonia pickettii 12J] gi|240866559|gb|ACS64220.1| ribosomal protein L3 [Ralstonia pickettii 12D] Length = 217 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 92/207 (44%), Positives = 127/207 (61%), Gaps = 3/207 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTVL + + +V +T + +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTDDGDSIPVTVLEVGDNRVTQIKTDETDGYTAVQVTFGTRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQ--KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 V+KP+ G + V + + EFRV + + P G+ S F VGQ +DV G+TIGK Sbjct: 61 VTKPLAGHLAKAGVEAGEVIKEFRVDAARAAEFQP-GANISVDLFEVGQKIDVQGVTIGK 119 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG TV+NLE Sbjct: 120 GYAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLE 179 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWIL 205 + +D +R L+LVKG +PGAK I+ Sbjct: 180 IAKIDAERKLLLVKGAIPGAKGGQVIV 206 >gi|94312248|ref|YP_585458.1| 50S ribosomal protein L3 [Cupriavidus metallidurans CH34] gi|122987810|sp|Q1LI37|RL3_RALME RecName: Full=50S ribosomal protein L3 gi|93356100|gb|ABF10189.1| 50S ribosomal subunit protein L3 [Cupriavidus metallidurans CH34] Length = 214 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 89/206 (43%), Positives = 125/206 (60%), Gaps = 1/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ + + +V +T + +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTDDGDSIPVTVVEVGDNRVTQIKTDETDGYTAVQVTFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + + EFR+ L GS S F VGQ +DV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEVIKEFRIDAAKAAELQAGSSLSVDLFQVGQKIDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KRH+F RATHG S SH GS G QDPGRVF K+M G +G TV+NLE+ Sbjct: 121 YAGTIKRHHFASGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDATRTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205 +D +R L+LVKG +PG+K I+ Sbjct: 181 AKIDAERKLLLVKGAIPGSKGGKVIV 206 >gi|257470826|ref|ZP_05634916.1| 50S ribosomal protein L3P [Fusobacterium ulcerans ATCC 49185] Length = 208 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 91/209 (43%), Positives = 134/209 (64%), Gaps = 3/209 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++A+K+GMT ++ +G+ IPVTV+ V+ +T++ +GY A+Q+G E K KN + Sbjct: 2 SGILAKKIGMTQIFE-DGKFIPVTVVEAGPNYVLQKKTVENDGYTALQLGFDEKKEKNTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F V+P++ + E RV + +G + VD+TG + GKG +G Sbjct: 61 KPIMGIFKKAGVNPQRFVKELRVDSVEGF-ELGQEIKADVLAEVEYVDITGTSKGKGTAG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF G RA+HGVS +HR GS G PG+V + KKMAG+ G VTV+NL+VV V Sbjct: 120 VMKRHNFAGNRASHGVSRNHRLGGSIGMSSWPGKVLRGKKMAGQYGNATVTVQNLKVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D + L+L+KG VPG+ KNS+I+V+ + K Sbjct: 180 DVENNLLLIKGAVPGS-KNSYIVVKPAVK 207 >gi|182680994|ref|YP_001829154.1| 50S ribosomal protein L3 [Xylella fastidiosa M23] gi|182631104|gb|ACB91880.1| ribosomal protein L3 [Xylella fastidiosa M23] gi|307579463|gb|ADN63432.1| 50S ribosomal protein L3 [Xylella fastidiosa subsp. fastidiosa GB514] Length = 210 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 98/209 (46%), Positives = 129/209 (61%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G V RK GM+ V+ +G IPVT++ +VV +T D +GY AVQV G + V+K Sbjct: 2 GFVGRKAGMSRVFLEDGCSIPVTLIEATANRVVQIKTSDVDGYDAVQVTVGSRRSVLVNK 61 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P G F+ V + L+EFRV+K VGS S F VGQ VD+ G+T GKGF G Sbjct: 62 PESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGFQG 121 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHNF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + +V+NLEV+ + Sbjct: 122 TIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVKQSVQNLEVIKI 181 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +R LI V+G +PGA +L+R + K Sbjct: 182 DVERCLIAVRGAIPGASGGD-VLIRSASK 209 >gi|304438362|ref|ZP_07398303.1| 50S ribosomal protein L3 [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368728|gb|EFM22412.1| 50S ribosomal protein L3 [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 220 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 98/215 (45%), Positives = 131/215 (60%), Gaps = 5/215 (2%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RKLGMT ++ EGR +PVTV+ N V+ +T++ +GY AVQ+G G+ K KNV+KP Sbjct: 8 ILGRKLGMTQIFTEEGRVVPVTVVESGNNFVLRSKTVESDGYNAVQIGFGDIKEKNVTKP 67 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 ++G F V + + E R+ + VG F G LVDV G + GKGF+G + Sbjct: 68 LKGQFEKAGVKAVRFIREMRLAAPSE-YNVGDTIGVDIFAEGDLVDVVGTSKGKGFAGGI 126 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCR-QDP-GRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 KRHNF HG S SHR GSTG P GRV K KK+ GRMGG RVTV+ L VV V Sbjct: 127 KRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLTVVRV 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 D R LIL+KG +PG KK +++++D+ K A K Sbjct: 186 DADRNLILIKGAIPGPKKG-FVVIKDTVKPAKAAK 219 >gi|111220546|ref|YP_711340.1| 50S ribosomal protein L3 [Frankia alni ACN14a] gi|123339021|sp|Q0RRS1|RL3_FRAAA RecName: Full=50S ribosomal protein L3 gi|111148078|emb|CAJ59746.1| 50S ribosomal subunit protein L3 [Frankia alni ACN14a] Length = 234 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 92/208 (44%), Positives = 122/208 (58%), Gaps = 2/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ V +T D +GY AVQ+G GE + ++K Sbjct: 8 GLLGTKLGMTQVWDANNRVVPVTVIKAGPNVVTQVKTPDSDGYSAVQLGYGEIDPRKINK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P RG F++ V+P++ L E R + P G + F G +VDVTG + GKGF+G Sbjct: 68 PARGHFATSGVTPRRHLVELRTADAGNYRP-GQELTGEVFAEGTVVDVTGTSKGKGFAGV 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GL A HGV HRS GS G PGRVFK +MAGRMG R T L + +VD Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGHARTTTPGLTIHAVD 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 +RG +LVKG +PG + VR + K Sbjct: 187 TERGFLLVKGAIPG-PDGGLVFVRSAAK 213 >gi|157148900|ref|YP_001456219.1| 50S ribosomal protein L3 [Citrobacter koseri ATCC BAA-895] gi|166233131|sp|A8AQM0|RL3_CITK8 RecName: Full=50S ribosomal protein L3 gi|157086105|gb|ABV15783.1| hypothetical protein CKO_04738 [Citrobacter koseri ATCC BAA-895] Length = 209 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 92/195 (47%), Positives = 125/195 (64%), Gaps = 1/195 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLAEGEEYT-VGQSISVELFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGA 198 +R L+LVKG VPGA Sbjct: 182 AERNLLLVKGGVPGA 196 >gi|119718125|ref|YP_925090.1| 50S ribosomal protein L3P [Nocardioides sp. JS614] gi|166990937|sp|A1SNL8|RL3_NOCSJ RecName: Full=50S ribosomal protein L3 gi|119538786|gb|ABL83403.1| LSU ribosomal protein L3P [Nocardioides sp. JS614] Length = 223 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 91/213 (42%), Positives = 125/213 (58%), Gaps = 2/213 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ V RT +GY A+QVG GE + V+K Sbjct: 9 GLLGTKLGMTQVWDENNRVVPVTVIAAGTNVVTQVRTPATDGYNAIQVGYGEIDGRKVTK 68 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F +P++ L E R D VG + F G+ +DVTG + GKGF+G Sbjct: 69 PQAGHFGKAGTTPRRHLVEIRTALAADYT-VGQELAVDTFAAGEEIDVTGTSKGKGFAGT 127 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G+ A+HG +HR GS G PGRVFK +MAGRMG + VT +N+ V +VD Sbjct: 128 MKRHGFAGVSASHGAHRNHRKPGSIGACATPGRVFKGVRMAGRMGTDTVTTQNVTVHAVD 187 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 +GLIL+KG VPG K +++R + KS++ Sbjct: 188 TAKGLILLKGAVPG-PKGGLVVLRSAAKSSLTS 219 >gi|134096321|ref|YP_001101396.1| 50S ribosomal protein L3 [Herminiimonas arsenicoxydans] gi|212288400|sp|A4G9T8|RL3_HERAR RecName: Full=50S ribosomal protein L3 gi|133740224|emb|CAL63275.1| 50S ribosomal subunit protein L3 [Herminiimonas arsenicoxydans] Length = 224 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 96/209 (45%), Positives = 125/209 (59%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G IPVTVL + N +V +T D +GY AVQV G + V+K Sbjct: 10 GLLGRKVGMMRIFTDDGDSIPVTVLDVSNNRVTQIKTPDVDGYSAVQVAFGSRRASRVNK 69 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 G + V L EFRV L VG V + S F VGQ VDV G+TIGKG++G Sbjct: 70 ASAGHHAKAGVEAGTVLKEFRVAATAASELKVGDVIAASLFEVGQKVDVQGVTIGKGYAG 129 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH+F RATHG S SH GS G QDPGRVF K+M G +G T++NLE+ + Sbjct: 130 TIKRHHFASGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVARTMQNLEIARI 189 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D R L+LVKG VPGA KN ++V + K Sbjct: 190 DADRQLLLVKGAVPGA-KNGQVIVSPAVK 217 >gi|323141356|ref|ZP_08076247.1| 50S ribosomal protein L3 [Phascolarctobacterium sp. YIT 12067] gi|322414105|gb|EFY04933.1| 50S ribosomal protein L3 [Phascolarctobacterium sp. YIT 12067] Length = 213 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 94/213 (44%), Positives = 133/213 (62%), Gaps = 5/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT ++ +GR IPVTV+ C V+ ++T + +GY AVQ+G GE K K+ Sbjct: 1 MAKGILGKKLGMTQIFEADGRLIPVTVVEAGPCVVLQNKTEETDGYNAVQLGFGEIKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KPM+G F V+P K + E R+ + VG + F G+L+D +G++ GKGF Sbjct: 61 TTKPMKGHFDKAGVTPVKFVRELRLAAPSEYA-VGDKIAADIFAAGELIDASGVSRGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTG-CRQDP-GRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KRHNF HG S SHR GS G P GRV K KK+ GRMG VTV+ L Sbjct: 120 AGTIKRHNFSRGPMKHG-SKSHREPGSMGPMHSGPGGRVIKGKKLPGRMGNANVTVQRLT 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VV VD +R LILVKG +PGA S+++++++ K Sbjct: 179 VVKVDAERNLILVKGAIPGA-TGSYVVLKETVK 210 >gi|119963305|ref|YP_948657.1| 50S ribosomal protein L3 [Arthrobacter aurescens TC1] gi|171704615|sp|A1R8U5|RL3_ARTAT RecName: Full=50S ribosomal protein L3 gi|119950164|gb|ABM09075.1| ribosomal protein L3 [Arthrobacter aurescens TC1] Length = 216 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 89/210 (42%), Positives = 125/210 (59%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ + IPVTV+ D+ + R + +GY+AVQ+G G+ + V+K Sbjct: 9 GLLGTKLGMTQVWDENNKLIPVTVVQADSNVITQLRNAEVDGYVAVQIGYGQIDPRKVTK 68 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+P++ + E R D +G S F GQ +DV G + GKGF+G Sbjct: 69 PLAGHFEKAGVTPRRHVVELRT-ADAASYELGQELSVEIFEAGQKIDVVGTSKGKGFAGV 127 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G+ A+HG +HR GS G P RVFK KMAGRMG R T NL V ++D Sbjct: 128 MKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGLKMAGRMGAERHTTLNLTVHAID 187 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++ L+L+KG VPGA + +LVR + K A Sbjct: 188 AEKSLLLIKGAVPGA-RGQVVLVRTAVKGA 216 >gi|307267014|ref|ZP_07548530.1| 50S ribosomal protein L3 [Thermoanaerobacter wiegelii Rt8.B1] gi|306917999|gb|EFN48257.1| 50S ribosomal protein L3 [Thermoanaerobacter wiegelii Rt8.B1] Length = 210 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 97/212 (45%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +K GMT ++N +G IPVTV+ C VV +T++ +GY A+QVG G+ K K Sbjct: 1 MKKGILGKKHGMTQIFNEKGEVIPVTVIEAGPCVVVQKKTVETDGYNAIQVGFGDVKEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+ G F V V K+ L EF++ D + VGS F G VDVTG++ GKGF Sbjct: 61 LTKPLIGHFKKVGVPFKRYLREFKLD-DINGYEVGSEIKVDIFKPGDRVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR+ +HG S HR GS G DPGR FK K M G MG RVT++NLEVV Sbjct: 120 AGVVKRYGANRGPMSHG-SKYHRRVGSMGATTDPGRTFKGKIMPGHMGHERVTIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + L+LVKG VPG K S ++++DS KS Sbjct: 179 KVDPELNLLLVKGSVPGP-KGSLLIIKDSVKS 209 >gi|327402783|ref|YP_004343621.1| 50S ribosomal protein L3P [Fluviicola taffensis DSM 16823] gi|327318291|gb|AEA42783.1| LSU ribosomal protein L3P [Fluviicola taffensis DSM 16823] Length = 204 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 90/203 (44%), Positives = 125/203 (61%), Gaps = 4/203 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT VY+ EG+ P TV+ C V +T D++GY A+Q+G GE + KN Sbjct: 3 GIIGKKIGMTSVYSAEGKATPCTVIEAGPCVVTQVKTQDRDGYEAIQLGFGERREKNTPN 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 ++G F N +PK KL EF K D L +G V F G+ V + G + GKGF G Sbjct: 63 ALKGHFKKANTTPKSKLVEF---KGFDGLNLGDVVDVQLFEQGEFVGIAGTSKGKGFQGV 119 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHNFGG+ ++THG R+ GS G P RVFK +MAG+MG RVTV+NLEV+ V Sbjct: 120 VKRHNFGGVGQSTHGQHNRLRAPGSIGACSYPARVFKGMRMAGQMGNKRVTVENLEVLRV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205 + LI+VKG +PG K ++ I+ Sbjct: 180 LADKNLIVVKGSIPGPKGSTVII 202 >gi|13432203|sp|P30762|RL3_MYCLE RecName: Full=50S ribosomal protein L3 Length = 217 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 93/212 (43%), Positives = 126/212 (59%), Gaps = 3/212 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ R +PVTV+ V RTL+++GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTLERDGYSAVQLAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP+ G ++S V+P++ L E R+ D VG + F VDVTG + GKG Sbjct: 63 NKPVTGQYNSAGVNPRRYLAELRLDHPDAAAEYEVGQELTAEIFADATYVDVTGTSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV+NL V Sbjct: 123 FSGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + G++L+KG VPG + ++VR + K Sbjct: 183 HKVDTENGVLLIKGAVPG-RTGGLVMVRSAIK 213 >gi|33564555|emb|CAE43871.1| 50S ribosomal protein L3 [Bordetella pertussis Tohama I] Length = 214 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 92/207 (44%), Positives = 124/207 (59%), Gaps = 3/207 (1%) Query: 8 RKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRG 67 RK+GMT ++ +G IPVTVL + N +V ++L+ +GY A+QV G + V KP G Sbjct: 3 RKVGMTRIFTEDGESIPVTVLDVSNNRVTQVKSLESDGYAAIQVTYGTRRATRVVKPQAG 62 Query: 68 FFSSVNVSPKKKLFEFRVQKDDDLLPVGS--VFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 ++ L EFR+ + S F GQ VDVTG +IGKGF+G +K Sbjct: 63 HYAKAGAEAGSILKEFRLDPARAAEFAAGAVIAVESVFEAGQQVDVTGTSIGKGFAGTIK 122 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 RHNFG RA+HG S SHR GS G QDPGR+F K+M+G MG TV+NL+VV VD + Sbjct: 123 RHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMSGHMGDVTRTVQNLDVVRVDAE 182 Query: 186 RGLILVKGCVPGAKKNSWILVRDSFKS 212 RGL++VKG VPG ++VR + K+ Sbjct: 183 RGLLMVKGAVPG-HAGGDVIVRPAVKA 208 >gi|15828002|ref|NP_302265.1| 50S ribosomal protein L3 [Mycobacterium leprae TN] gi|221230479|ref|YP_002503895.1| 50S ribosomal protein L3 [Mycobacterium leprae Br4923] gi|13093555|emb|CAC30817.1| 50S ribosomal protein L3 [Mycobacterium leprae] gi|219933586|emb|CAR71959.1| 50S ribosomal protein L3 [Mycobacterium leprae Br4923] Length = 218 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 93/212 (43%), Positives = 126/212 (59%), Gaps = 3/212 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ R +PVTV+ V RTL+++GY AVQ+ GE + V Sbjct: 4 RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTLERDGYSAVQLAYGEISPRKV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP+ G ++S V+P++ L E R+ D VG + F VDVTG + GKG Sbjct: 64 NKPVTGQYNSAGVNPRRYLAELRLDHPDAAAEYEVGQELTAEIFADATYVDVTGTSKGKG 123 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV+NL V Sbjct: 124 FSGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 183 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + G++L+KG VPG + ++VR + K Sbjct: 184 HKVDTENGVLLIKGAVPG-RTGGLVMVRSAIK 214 >gi|261367803|ref|ZP_05980686.1| 50S ribosomal protein L3 [Subdoligranulum variabile DSM 15176] gi|282570601|gb|EFB76136.1| 50S ribosomal protein L3 [Subdoligranulum variabile DSM 15176] Length = 210 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 90/214 (42%), Positives = 126/214 (58%), Gaps = 6/214 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +KLGMT +++ G+ +PVT++ C VV +T++ +GY AVQ+G GE K Sbjct: 1 MQKGIIGKKLGMTQLFDANGKVVPVTIIEAGPCTVVQKKTVESDGYQAVQMGYGEVSAKK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118 V+K +G F +V+PK+ L EFR DD+ L VG + F G VDV G + GK Sbjct: 61 VNKAAKGHFDKADVAPKRTLREFRF---DDIASLNVGDILKADVFAEGDKVDVVGTSKGK 117 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G+ G +KR LR +HG R GS G P RVFK K++ G MG RVTV+NL Sbjct: 118 GYQGVIKRFGQHRLRESHGTGPVARHAGSNGSTSTPSRVFKGKRLPGHMGAVRVTVQNLS 177 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VV VD + LI +KG +PG K S + + DS K+ Sbjct: 178 VVKVDAENNLIAIKGAIPGP-KGSVVTIHDSVKA 210 >gi|326390661|ref|ZP_08212216.1| 50S ribosomal protein L3 [Thermoanaerobacter ethanolicus JW 200] gi|325993339|gb|EGD51776.1| 50S ribosomal protein L3 [Thermoanaerobacter ethanolicus JW 200] Length = 210 Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 98/214 (45%), Positives = 133/214 (62%), Gaps = 7/214 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +K GMT ++N +G IPVTV+ C VV +T++ +GY A+QVG G+ K K Sbjct: 1 MKKGILGKKHGMTQIFNEKGEVIPVTVIEAGPCVVVQKKTVETDGYNAIQVGFGDVKEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118 ++KP+ G F V V K+ L EF++ DD+ VGS F G VDVTG++ GK Sbjct: 61 LTKPLIGHFKKVGVPFKRYLREFKL---DDISGYEVGSEIKVDIFKPGDRVDVTGISKGK 117 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF+G +KR+ +HG S HR GS G DPGR FK K M G MG RVT++NLE Sbjct: 118 GFAGVVKRYGANRGPMSHG-SKYHRRVGSMGATTDPGRTFKGKIMPGHMGHERVTIQNLE 176 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VV VD + L+LVKG VPG K S ++++DS KS Sbjct: 177 VVKVDPELNLLLVKGSVPGP-KGSLLIIKDSVKS 209 >gi|299143194|ref|ZP_07036274.1| 50S ribosomal protein L3 [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517679|gb|EFI41418.1| 50S ribosomal protein L3 [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 210 Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 90/208 (43%), Positives = 134/208 (64%), Gaps = 3/208 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT +++ EG+ PVTV+ + VV +T++ +GY AVQV G K + V+KP Sbjct: 4 LIGKKIGMTQIFDEEGKVTPVTVIEAEPNVVVQKKTVEVDGYNAVQVATGFVKERRVNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 ++G F+ V KK L EFR ++ ++ +G F+VG+ +DVTG + GKG G + Sbjct: 64 LKGHFAKAGVECKKNLREFRTEEVENY-NIGDEIKVDLFSVGEFIDVTGTSKGKGTQGVI 122 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 +RH FG R THG S HR G G PG+VFKN +MAG+MG +VTV+NLEVV VD Sbjct: 123 RRHGFGRGRETHG-SKFHRMPGGMGAATYPGKVFKNHRMAGKMGNEQVTVQNLEVVRVDL 181 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212 ++ LILVKG +PG KK + ++++ K+ Sbjct: 182 EKNLILVKGAIPGPKK-GIVTLKETVKA 208 >gi|289665137|ref|ZP_06486718.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289669344|ref|ZP_06490419.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 216 Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 94/211 (44%), Positives = 129/211 (61%), Gaps = 4/211 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G V RK GM+ + +GR +PVT++ ++ +T++ +GY AVQ+ G + V+K Sbjct: 8 GFVGRKAGMSRFFTEDGRSVPVTLIEATPNRIAQIKTVEVDGYSAVQITVGARRAALVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 P G F+ V + L+EFRV+ D L VG F VGQ VDV G+T GKGF Sbjct: 68 PAAGHFAKAKVEAGRGLWEFRVE-DAQLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQ 126 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR+NF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + + +NLEVV Sbjct: 127 GTIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVK 186 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +RGLI ++G VPGA ++VR + K+ Sbjct: 187 VDVERGLIAIRGAVPGAAGGD-VIVRPASKA 216 >gi|332038837|gb|EGI75279.1| 50S ribosomal protein L3 [Pseudoalteromonas haloplanktis ANT/505] Length = 211 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 91/198 (45%), Positives = 120/198 (60%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ ++ ++ +GY A+QV AG K Sbjct: 1 MALGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRIAQIKSDATDGYNALQVTAGTKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ V + L+EFR+ + VG+ + F VDVTG + GKGF Sbjct: 61 VNKAKAGHFAKAGVEAGRGLWEFRLNGGEGDFEVGAELTVELFNEINKVDVTGTSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG MG RVT +NLE+V Sbjct: 121 QGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGHMGAERVTTQNLELV 180 Query: 181 SVDDKRGLILVKGCVPGA 198 VD +R L+LVKG VPGA Sbjct: 181 RVDAERNLLLVKGAVPGA 198 >gi|237728655|ref|ZP_04559136.1| 50S ribosomal protein L3 [Citrobacter sp. 30_2] gi|226909277|gb|EEH95195.1| 50S ribosomal protein L3 [Citrobacter sp. 30_2] Length = 209 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 93/195 (47%), Positives = 124/195 (63%), Gaps = 1/195 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ D + VG S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLA-DGEEYTVGQNISVELFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGA 198 +R L+LVKG VPGA Sbjct: 182 AERNLLLVKGGVPGA 196 >gi|254303420|ref|ZP_04970778.1| ribosomal protein L3 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323612|gb|EDK88862.1| ribosomal protein L3 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 211 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT ++ +G+ +PVTV+ V+ +T +K+GY+A+Q+G E K KN + Sbjct: 2 SGILGKKIGMTQIFE-DGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ V P++ + E V+ D +G Q VD+TG + GKG SG Sbjct: 61 KPLMGIFNKAGVKPQRFVKELEVESVDGY-ELGQEIKVDVLAEVQYVDITGTSKGKGTSG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGG RA+HGVS +HR GS G PG+V K K+MAG+ G VTV+NL+VV V Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D + L+L+KG VPGA KN ++++R + K + Sbjct: 180 DAEHNLLLIKGAVPGA-KNGYLVIRPAVKKVI 210 >gi|160881785|ref|YP_001560753.1| ribosomal protein L3 [Clostridium phytofermentans ISDg] gi|189042839|sp|A9KJJ4|RL3_CLOPH RecName: Full=50S ribosomal protein L3 gi|160430451|gb|ABX44014.1| ribosomal protein L3 [Clostridium phytofermentans ISDg] Length = 211 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 96/212 (45%), Positives = 126/212 (59%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N G PVTVL C V +T+D +GY AVQVG G+ + Sbjct: 1 MKKAILATKIGMTQIFNENGVLTPVTVLQAGPCAVTQVKTVDNDGYAAVQVGFGDIRETL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G F+ V+ K+ L EFR + D VG FT G +D TG + GKGF Sbjct: 61 VNKPQKGHFAKAGVANKRFLKEFRFENAADYT-VGQEIKVDIFTAGDKIDATGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G PGRVFK K M G+MG +VTV+NLEVV Sbjct: 120 QGAIKRHGLSRGPMGHG-SKFHRHAGSNGAATTPGRVFKGKHMPGQMGNVKVTVQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D LILVKG VPG KK + I+++++ KS Sbjct: 179 KIDVDNNLILVKGAVPGPKK-AMIMLKETVKS 209 >gi|119502924|ref|ZP_01625009.1| 50S ribosomal protein L3 [marine gamma proteobacterium HTCC2080] gi|119461270|gb|EAW42360.1| 50S ribosomal protein L3 [marine gamma proteobacterium HTCC2080] Length = 211 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 98/211 (46%), Positives = 129/211 (61%), Gaps = 1/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT V+ EG +PVTV+ + +V + L+ +GY A+QV G+ K Sbjct: 1 MTIGIVGRKSGMTRVFTDEGVSVPVTVVEVLPNRVTQIKDLETDGYRAIQVTTGDRKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKP G ++ + L+EFR+ ++ VGS + F GQ VDV G + GKGF Sbjct: 61 VSKPAAGHYAKAGTAAGDGLWEFRLDGSEETFEVGSELTVERFEQGQKVDVAGRSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR NF ATHG S+SHR+ GS G Q PGRVFK KKMAG MG RVT + LEVV Sbjct: 121 QGAVKRWNFSMQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQGLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D +R L+L+KG VPGA ++VR + K Sbjct: 181 RIDSERNLLLIKGAVPGAPGGH-VIVRPTVK 210 >gi|313673467|ref|YP_004051578.1| LSU ribosomal protein l3p [Calditerrivibrio nitroreducens DSM 19672] gi|312940223|gb|ADR19415.1| LSU ribosomal protein L3P [Calditerrivibrio nitroreducens DSM 19672] Length = 212 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 94/212 (44%), Positives = 130/212 (61%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ RK+GMT ++ EG IPVTV+ CQVV +T +K+GY A+Q+G + +N Sbjct: 1 MLKALIGRKIGMTQIFTSEGNVIPVTVVQAGPCQVVQKKTTEKDGYNALQLGFDKILKEN 60 Query: 61 -VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KPM G F V K L EF+V+ D+ VG + S F G +VDV G++IGKG Sbjct: 61 KINKPMGGHFKKHGVDAHKTLKEFKVENPDEYQ-VGQEINVSVFAEGDIVDVQGVSIGKG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KRH F G A HG S HR+ GS G R+ PG K KK+ GRMGG VTV+ LEV Sbjct: 120 FQGVIKRHGFAGGPAAHG-SDFHRAPGSIGMREWPGETLKGKKLPGRMGGKTVTVQKLEV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V V + L+L+KG +PG NS + ++++ K Sbjct: 179 VKVLPDKNLLLIKGAIPG-HDNSIVFIKETTK 209 >gi|34764925|ref|ZP_00145270.1| LSU ribosomal protein L3P [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27885736|gb|EAA23133.1| LSU ribosomal protein L3P [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 211 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 135/212 (63%), Gaps = 3/212 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT ++ +G+ +PVTV+ V+ +T +K+GY+A+Q+G E K KN + Sbjct: 2 SGILGKKIGMTQIFE-DGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ V P++ + E V+ D +G T + VD+TG + GKG SG Sbjct: 61 KPLMGIFNKAGVKPQRFVKELAVESVDGY-ELGQEIKVDVLTEVEYVDITGTSKGKGTSG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGG RA+HGVS +HR GS G PG+V K K+MAG+ G VTV+NL+VV V Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D + L+L+KG VPGA KN ++++R + K + Sbjct: 180 DAEHNLLLIKGAVPGA-KNGYLVIRPAVKKVI 210 >gi|300690160|ref|YP_003751155.1| 50S ribosomal subunit protein L3 [Ralstonia solanacearum PSI07] gi|299077220|emb|CBJ49846.2| 50S ribosomal subunit protein L3 [Ralstonia solanacearum PSI07] Length = 220 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 94/213 (44%), Positives = 128/213 (60%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V+ +G IPVTVL + +V +T + +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + + EFR+ L +G F VGQ +DV G TIGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEIIVEFRIDAAKAAELKLGDTIDVDLFAVGQKIDVQGTTIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG TV+NL + Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LVKG VPGA K+ +++V + K+ Sbjct: 181 VRVDAERKLLLVKGAVPGA-KSGFVVVSPAVKA 212 >gi|28198353|ref|NP_778667.1| 50S ribosomal protein L3 [Xylella fastidiosa Temecula1] gi|42559619|sp|Q87E82|RL3_XYLFT RecName: Full=50S ribosomal protein L3 gi|212288597|sp|B2I8G9|RL3_XYLF2 RecName: Full=50S ribosomal protein L3 gi|28056423|gb|AAO28316.1| 50S ribosomal protein L3 [Xylella fastidiosa Temecula1] Length = 215 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 98/209 (46%), Positives = 129/209 (61%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G V RK GM+ V+ +G IPVT++ +VV +T D +GY AVQV G + V+K Sbjct: 7 GFVGRKAGMSRVFLEDGCSIPVTLIEATANRVVQIKTSDVDGYDAVQVTVGSRRSVLVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P G F+ V + L+EFRV+K VGS S F VGQ VD+ G+T GKGF G Sbjct: 67 PESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGFQG 126 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHNF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + +V+NLEV+ + Sbjct: 127 TIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVKQSVQNLEVIKI 186 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +R LI V+G +PGA +L+R + K Sbjct: 187 DVERCLIAVRGAIPGASGGD-VLIRSASK 214 >gi|58583207|ref|YP_202223.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84625044|ref|YP_452416.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|81311762|sp|Q5GWT3|RL3_XANOR RecName: Full=50S ribosomal protein L3 gi|109893572|sp|Q2NZY5|RL3_XANOM RecName: Full=50S ribosomal protein L3 gi|212288596|sp|B2SQR0|RL3_XANOP RecName: Full=50S ribosomal protein L3 gi|58427801|gb|AAW76838.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84368984|dbj|BAE70142.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 216 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 94/211 (44%), Positives = 129/211 (61%), Gaps = 4/211 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G V RK GM+ ++ +GR +PVT++ ++ +T++ +GY AVQ+ G + V+K Sbjct: 8 GFVGRKAGMSRIFTEDGRSVPVTLIEATPNRIAQIKTVEVDGYSAVQITVGARRAALVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 P G F+ V + L+EFRV+ D L VG F VGQ VDV G+T GKGF Sbjct: 68 PAAGHFAKAKVEAGRGLWEFRVE-DAHLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQ 126 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR+NF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + + +NLEVV Sbjct: 127 GTIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVK 186 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +RGLI + G VPGA ++VR + K+ Sbjct: 187 VDVERGLIAIHGAVPGAAGGD-VIVRPASKA 216 >gi|270264373|ref|ZP_06192639.1| 50S ribosomal protein L3 [Serratia odorifera 4Rx13] gi|270041509|gb|EFA14607.1| 50S ribosomal protein L3 [Serratia odorifera 4Rx13] Length = 209 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 92/202 (45%), Positives = 126/202 (62%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTTGSKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR+ + ++ G S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLAEGEEFT-AGQNISVEIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG +G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGGNLIV 203 >gi|300309456|ref|YP_003773548.1| 50S ribosomal protein L3 [Herbaspirillum seropedicae SmR1] gi|300072241|gb|ADJ61640.1| 50S ribosomal subunit L3 protein [Herbaspirillum seropedicae SmR1] Length = 222 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 96/212 (45%), Positives = 125/212 (58%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GM ++ +G IPVTVL + N +V +T + +GY AVQV G+ + Sbjct: 5 MSLGLVGRKVGMMRIFTEDGDSIPVTVLDVSNNRVTQIKTPEVDGYSAVQVTFGQRRASR 64 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V K G F+ V L EFRV L G V F GQ VDV G++IGKG Sbjct: 65 VVKAAAGHFAKAGVEAGTVLKEFRVDASKAAELKAGDVVGIGMFEAGQKVDVQGVSIGKG 124 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RATHG S SH GS G QDPGRVF K+M G +G + TV+NLE+ Sbjct: 125 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVKTTVQNLEI 184 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L+LVKG VPGA KN ++V + K Sbjct: 185 ARVDAERQLLLVKGAVPGA-KNGQVIVSPAVK 215 >gi|319760329|ref|YP_004124267.1| 50S ribosomal protein L3 [Candidatus Blochmannia vafer str. BVAF] gi|318039043|gb|ADV33593.1| 50S ribosomal protein L3 [Candidatus Blochmannia vafer str. BVAF] Length = 217 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 87/196 (44%), Positives = 128/196 (65%), Gaps = 1/196 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 +G++ RKLGMT ++ +G IPVT++ + V+ + L ++GY AVQV G +KV ++ Sbjct: 2 NGLIGRKLGMTRLFGEDGVSIPVTMVEVLPNHVIQIKNLKRDGYCAVQVTTGHSKVNCLN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G V P K L+EFRV D + +G V + F + VDVTG++ GKGFSG Sbjct: 62 KPQLGHLKKAGVKPGKGLWEFRVN-SDSTISLGDVITIEIFKNAKEVDVTGISKGKGFSG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF A+HG S+SHR+ GS G Q PG+VFK KKMAG++G +RVTV+NL++++V Sbjct: 121 TIKRWNFHTQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQLGNSRVTVQNLKIINV 180 Query: 183 DDKRGLILVKGCVPGA 198 + ++L+KG +PG Sbjct: 181 NLNDNVLLIKGAIPGT 196 >gi|228472276|ref|ZP_04057042.1| 50S ribosomal protein L3 [Capnocytophaga gingivalis ATCC 33624] gi|228276479|gb|EEK15203.1| 50S ribosomal protein L3 [Capnocytophaga gingivalis ATCC 33624] Length = 205 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 87/206 (42%), Positives = 130/206 (63%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP T++ C V RT + +GY A+Q+G + K K+ S Sbjct: 2 SGLIGKKVGMTSIFDENGKNIPCTIIEAGPCVVTQVRTKEVDGYEALQLGFDDKKEKHTS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F+ V+PKKKL EF Q + +G + +F G+ VDVTG + GKGF G Sbjct: 62 KAAAGHFAKAGVTPKKKLVEF--QGFESTYKLGDTITAEFFVEGEFVDVTGTSKGKGFQG 119 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 ++RH FGG+ ++THG R+ GS G P RVFK +MAGRMG +VTV+NL+V+ Sbjct: 120 VVRRHGFGGVGQSTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ LI++KGCVPG KN+++ + Sbjct: 180 VIPEKNLIILKGCVPG-HKNAYVTIH 204 >gi|159039834|ref|YP_001539087.1| ribosomal protein L3 [Salinispora arenicola CNS-205] gi|212288411|sp|A8M529|RL3_SALAI RecName: Full=50S ribosomal protein L3 gi|157918669|gb|ABW00097.1| ribosomal protein L3 [Salinispora arenicola CNS-205] Length = 219 Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 93/204 (45%), Positives = 125/204 (61%), Gaps = 3/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ C V R+ K+GY AVQ+ G + V K Sbjct: 7 GILGAKLGMTQVWD-NNRVVPVTVVQAGPCVVSQVRSHQKDGYAAVQLAYGAIDPRKVKK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G ++ +V+P++ + E R D +G + F G VDVTG T GKG++G Sbjct: 66 PISGHYTKADVAPRRHIVELRT-TDAAEYSLGQEVTVEQFPAGISVDVTGKTKGKGYAGP 124 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GLRA+HGV HRS GS G PGRVFK +MAGRMGG R TV+NL V +VD Sbjct: 125 MKRHGFHGLRASHGVERKHRSPGSIGGCATPGRVFKGTRMAGRMGGVRYTVQNLTVQAVD 184 Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207 + L+LV+G +PG K + +LVR Sbjct: 185 TENNLLLVRGAIPGP-KGALVLVR 207 >gi|167036801|ref|YP_001664379.1| 50S ribosomal protein L3 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256752632|ref|ZP_05493484.1| ribosomal protein L3 [Thermoanaerobacter ethanolicus CCSD1] gi|320115223|ref|YP_004185382.1| 50S ribosomal protein L3 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|226730582|sp|B0KCK0|RL3_THEP3 RecName: Full=50S ribosomal protein L3 gi|166855635|gb|ABY94043.1| ribosomal protein L3 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256748452|gb|EEU61504.1| ribosomal protein L3 [Thermoanaerobacter ethanolicus CCSD1] gi|319928314|gb|ADV78999.1| 50S ribosomal protein L3 [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 210 Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 98/214 (45%), Positives = 132/214 (61%), Gaps = 7/214 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ RK GMT +++ +G IPVTV+ C VV +T++ +GY A+QVG G+ K K Sbjct: 1 MKKGILGRKHGMTQIFDEKGEVIPVTVIEAGPCVVVQKKTVETDGYNAIQVGFGDVKEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118 ++KP+ G F V K+ L EFR+ DD+ VGS F G VDVTG++ GK Sbjct: 61 LTKPLIGHFKKAGVPFKRYLREFRL---DDISGYEVGSEIKVDIFKPGDRVDVTGISKGK 117 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF+G +KR+ +HG S HR GS G DPGR FK K M G MG RVT++NLE Sbjct: 118 GFAGVVKRYGANRGPMSHG-SKYHRRVGSMGATTDPGRTFKGKIMPGHMGHERVTIQNLE 176 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VV VD + L+LVKG VPG K S ++++DS KS Sbjct: 177 VVKVDPELNLLLVKGSVPGP-KGSLLIIKDSVKS 209 >gi|240167703|ref|ZP_04746362.1| 50S ribosomal protein L3 [Mycobacterium kansasii ATCC 12478] Length = 217 Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 126/212 (59%), Gaps = 3/212 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ R +PVTV+ V RT +++GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP+ G +++ V+P++ L E R+ D + VG + F G VDVTG + GKG Sbjct: 63 TKPLTGQYTAAGVNPRRHLAELRLDDPDAVAEYEVGQELTAEIFADGSYVDVTGTSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKRH F G A HG HR GS G P RVFK +MAGRMG +RVTV+NL V Sbjct: 123 FAGTMKRHGFRGQGAAHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + G++L+KG VPG + ++VR + K Sbjct: 183 HKVDAENGVLLIKGAVPG-RTGGLVMVRSAIK 213 >gi|291296991|ref|YP_003508389.1| 50S ribosomal protein L3 [Meiothermus ruber DSM 1279] gi|290471950|gb|ADD29369.1| ribosomal protein L3 [Meiothermus ruber DSM 1279] Length = 214 Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 95/208 (45%), Positives = 127/208 (61%), Gaps = 7/208 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ K+GMT ++ + + +PVTV+ C VV +T++K+GY AVQ+G K + V+K Sbjct: 3 GILGTKVGMTQIWKGD-KAVPVTVILAGPCPVVQRKTIEKDGYEAVQLGFQSQKPQRVNK 61 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G F+ V P K L E R P G + S F VG++VDVTG + G GF+G Sbjct: 62 PAKGHFAKAGVEPVKYLRELR-----GFNPEGDTVTVSIFNVGEVVDVTGTSKGHGFTGV 116 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MK+ NF G +HG HR GS G R+ PGRVFK KKMAGR G RVT++ LEVV V Sbjct: 117 MKKWNFAGGNDSHGAHKIHRHGGSIGNRKTPGRVFKGKKMAGRWGNERVTIQGLEVVDVL 176 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 + LILVKG VPGA S ++VR + K Sbjct: 177 ENENLILVKGSVPGA-NGSLVVVRQTSK 203 >gi|255530514|ref|YP_003090886.1| 50S ribosomal protein L3 [Pedobacter heparinus DSM 2366] gi|255343498|gb|ACU02824.1| ribosomal protein L3 [Pedobacter heparinus DSM 2366] Length = 205 Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 88/204 (43%), Positives = 129/204 (63%), Gaps = 3/204 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ +G+ IP TV+ C V +T +K+GY++VQ+ EAK KN + Sbjct: 2 SGIIGKKVGMTSIFDADGKNIPCTVIEAGPCVVTQVKTEEKDGYVSVQLSFDEAKEKNTT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G F+ +PK+KL EF + ++ L +G + + F G VDV G + GKGF G Sbjct: 62 MPLKGHFAKAKTTPKRKLVEF--EPFEESLNLGDTVTVNIFNEGDFVDVVGTSKGKGFQG 119 Query: 123 AMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG+ THG R+ GS G P RVFK +MAGRMGG+RV V+NL+V+ Sbjct: 120 VVKRHGFGGVGGQTHGQHNRMRAPGSLGAASYPSRVFKGMRMAGRMGGDRVKVQNLQVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWIL 205 V + L++V G VPGAK + IL Sbjct: 180 VYADQNLVVVSGSVPGAKGSYVIL 203 >gi|145596434|ref|YP_001160731.1| ribosomal protein L3 [Salinispora tropica CNB-440] gi|212288412|sp|A4XBP6|RL3_SALTO RecName: Full=50S ribosomal protein L3 gi|145305771|gb|ABP56353.1| LSU ribosomal protein L3P [Salinispora tropica CNB-440] Length = 219 Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 93/204 (45%), Positives = 125/204 (61%), Gaps = 3/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ C V R+ +K+GY AVQ+ G + V K Sbjct: 7 GILGAKLGMTQVWD-NNRVVPVTVVQAGPCVVSQVRSQEKDGYAAVQLAYGAIDPRKVKK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G ++ +V+P++ + E R D G + F G VDVTG T GKG++G Sbjct: 66 PISGHYAKADVAPRRHIVELRT-TDAGEYSSGQEVTVEEFPAGISVDVTGKTKGKGYAGP 124 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GLRA+HGV HRS GS G PGRVFK +MAGRMGG R TV+NL V +VD Sbjct: 125 MKRHGFHGLRASHGVERKHRSPGSIGGCATPGRVFKGTRMAGRMGGVRYTVQNLTVQAVD 184 Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207 + L+LV+G +PG K + +LVR Sbjct: 185 TENNLLLVRGAIPGP-KGALVLVR 207 >gi|327399523|ref|YP_004340392.1| 50S ribosomal protein L3 [Hippea maritima DSM 10411] gi|327182152|gb|AEA34333.1| 50S ribosomal protein L3 [Hippea maritima DSM 10411] Length = 206 Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 98/196 (50%), Positives = 125/196 (63%), Gaps = 3/196 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++A+KLGMT +Y +EG+ IPVTVL + +T +K+GY A+QVG + K K V+K Sbjct: 3 GLIAKKLGMTQLY-VEGKAIPVTVLEAQEGVITDIKTKEKDGYNAIQVGFIDTKEKRVTK 61 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G + V VSPKK L EFRV D D V F G++VDV G T G+GFSG Sbjct: 62 PLLGVYKKVGVSPKKILKEFRVD-DVDSFEVKGEVKVDIFQKGEIVDVIGHTKGRGFSGV 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF G HG S+ +R GS G + PGRV K +KM G G RVT+KNLEVV VD Sbjct: 121 MKRHNFAGGPDGHG-SMFNRRVGSIGNCEFPGRVVKGRKMPGHYGNERVTIKNLEVVFVD 179 Query: 184 DKRGLILVKGCVPGAK 199 ++ LI +KG VPG+K Sbjct: 180 PEKKLIAIKGAVPGSK 195 >gi|300779845|ref|ZP_07089701.1| 50S ribosomal protein L3 [Corynebacterium genitalium ATCC 33030] gi|300533955|gb|EFK55014.1| 50S ribosomal protein L3 [Corynebacterium genitalium ATCC 33030] Length = 217 Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 87/213 (40%), Positives = 123/213 (57%), Gaps = 2/213 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT +++ E R IPVTV+ C V RT + +GY A+Q+ G+ + K Sbjct: 7 GILGRKLGMTQIFDEENRVIPVTVVEAGPCVVTQIRTEETDGYSAIQIAYGDIDPRKAKK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G + +P++ + E R+ D +G + + F VDV G T GKG++GA Sbjct: 67 PQAGHYQKAGQNPRRHVAEIRMD-DTSAYELGQEVTVNIFDGDTFVDVAGTTKGKGYAGA 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G A HG +HR GS G PGRVFK K+MAGRMG NRVT +NL++ +D Sbjct: 126 MKRHGFAGQGAAHGNQAAHRRVGSIGGCATPGRVFKGKRMAGRMGSNRVTTQNLKIQRID 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 L+L+KG +PGA K S + V+ + K + Sbjct: 186 GDSNLLLIKGAIPGA-KGSLVTVKTAVKGGAHA 217 >gi|71018891|ref|XP_759676.1| hypothetical protein UM03529.1 [Ustilago maydis 521] gi|46099434|gb|EAK84667.1| hypothetical protein UM03529.1 [Ustilago maydis 521] Length = 373 Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 106/221 (47%), Positives = 134/221 (60%), Gaps = 11/221 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH----RTLDKNGYMAVQVGAGEA 56 R G++A K GMT + G RIP TVL + + QV H ++ Y A+QV A + Sbjct: 91 QRVGLIAVKRGMTSFFLPNGERIPATVLQVHSNQVSAHIGFGPDATESTYTALQVAAVDT 150 Query: 57 K-VKNVSKPMRGFFSSVNVSPKKKLF-EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGM 114 K +V+K ++G + KK+ EF V D L+P+G+ S +F GQ VDV + Sbjct: 151 KSTYHVTKQIQGHLKKAGIIKGKKIIREFPV-SSDALVPLGTQLSAVHFVPGQSVDVRAI 209 Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV-T 173 T G+GF G MKRH F GLRA+HGVSISHRSHGSTG QDPGRV+ KMAGRMGGN+ T Sbjct: 210 TRGRGFQGVMKRHGFHGLRASHGVSISHRSHGSTGANQDPGRVWPGTKMAGRMGGNKHGT 269 Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILV---RDSFK 211 + NL VV VD ++ LI VKG VPG K S L R S+K Sbjct: 270 IHNLLVVRVDAEKDLIYVKGNVPGPKGGSVTLQDARRPSWK 310 >gi|315125262|ref|YP_004067265.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas sp. SM9913] gi|315013775|gb|ADT67113.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas sp. SM9913] Length = 211 Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 90/198 (45%), Positives = 121/198 (61%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ ++ ++ +GY A+QV AG K Sbjct: 1 MALGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRIAQIKSDATDGYNALQVTAGTKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ V + L+EFR+ + VG+ + F VDVTG + GKGF Sbjct: 61 VNKATAGHFAKAGVEAGRGLWEFRLNGGEGDFEVGAELTVELFNEINKVDVTGTSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG+MG +VT +NLE+V Sbjct: 121 QGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNEQVTTQNLELV 180 Query: 181 SVDDKRGLILVKGCVPGA 198 VD +R L+LVKG VPGA Sbjct: 181 RVDAERNLLLVKGAVPGA 198 >gi|221133614|ref|ZP_03559919.1| 50S ribosomal subunit protein L3 [Glaciecola sp. HTCC2999] Length = 212 Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 95/213 (44%), Positives = 129/213 (60%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ +V RT + +GY A+QV AG K Sbjct: 1 MAIGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRVTQLRTEETDGYRALQVTAGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V L+EFR+ + + + VGS + F VDV G + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGSGLWEFRLDDSEGENIEVGSEITVELFNDTNKVDVVGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F GA+KR NF R THG S+SHR+ GS G Q PG+VFK KKMAG++G RVT +LE+ Sbjct: 121 FQGAIKRWNFSSQRMTHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQLGNKRVTTISLEL 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD + L+L+KG VPGA S ++VR + K+ Sbjct: 181 VRVDVENNLLLIKGAVPGA-TGSDVIVRPAVKA 212 >gi|220913432|ref|YP_002488741.1| 50S ribosomal protein L3 [Arthrobacter chlorophenolicus A6] gi|254803650|sp|B8HD06|RL3_ARTCA RecName: Full=50S ribosomal protein L3 gi|219860310|gb|ACL40652.1| ribosomal protein L3 [Arthrobacter chlorophenolicus A6] Length = 216 Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 90/210 (42%), Positives = 124/210 (59%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ + IPVTV+ D+ + R + +GY+AVQ+G G+ + V+K Sbjct: 9 GLLGTKLGMTQVWDENNKLIPVTVVQADSNVITQLRNAEVDGYVAVQIGYGQIDPRKVTK 68 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+P++ + E R D +G S F GQ +DV G T GKGF+G Sbjct: 69 PLAGHFEKAGVTPRRHVVELRT-ADAAEYELGQELSVELFAAGQKIDVIGTTKGKGFAGV 127 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G+ A+HG +HR GS G P RVFK KMAGRMG R T NL V +VD Sbjct: 128 MKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGMKMAGRMGAVRHTTLNLTVHAVD 187 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++ L+L+KG VPGA + + VR + K A Sbjct: 188 AEKSLLLIKGAVPGA-RGQVVFVRTAVKGA 216 >gi|239980056|ref|ZP_04702580.1| 50S ribosomal protein L3 [Streptomyces albus J1074] Length = 200 Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 93/202 (46%), Positives = 121/202 (59%), Gaps = 2/202 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V++ R +PVTV+ V RT D +GY AVQ+ GE + V+KP++G F+ Sbjct: 1 MTQVWDENNRVVPVTVVKAGANVVTQVRTNDTDGYEAVQIAFGEIDPRKVNKPLKGHFAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF G Sbjct: 61 ADVTPRRHLVEIRTA-DASEYTLGQELNADTFEAGLKVDVTGKSKGKGFAGVMKRHNFKG 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 L A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +VD ++GL+L+ Sbjct: 120 LGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVDAEKGLLLI 179 Query: 192 KGCVPGAKKNSWILVRDSFKSA 213 KG VPG +LVR + K A Sbjct: 180 KGAVPGP-NGGLVLVRTAAKGA 200 >gi|220906719|ref|YP_002482030.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 7425] gi|254803669|sp|B8HMQ4|RL3_CYAP4 RecName: Full=50S ribosomal protein L3 gi|219863330|gb|ACL43669.1| ribosomal protein L3 [Cyanothece sp. PCC 7425] Length = 212 Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 86/197 (43%), Positives = 120/197 (60%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT +++ E R IPVTV+ C + +T +GY A+QV GE + K+ Sbjct: 1 MAVGILGTKLGMTQIFDQERRAIPVTVVQAGPCPITQIKTKQTDGYAAIQVAFGEVRAKS 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SK G + N +P + L E+R + D VG V F+ GQ+VDVTG +IG+GF Sbjct: 61 LSKAELGHLAKSNTAPMRHLHEYRTGEVDQFQ-VGQVLKADLFSAGQVVDVTGTSIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRHNF HG S +HR GSTG PGRV+ K+MAG++G R T++ L +V Sbjct: 120 AGYQKRHNFKRGPMAHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGQLGSARTTIRQLTIV 178 Query: 181 SVDDKRGLILVKGCVPG 197 VD +R L+L+KG VPG Sbjct: 179 RVDPERNLVLIKGAVPG 195 >gi|21223082|ref|NP_628861.1| 50S ribosomal protein L3 [Streptomyces coelicolor A3(2)] gi|256785823|ref|ZP_05524254.1| 50S ribosomal protein L3 [Streptomyces lividans TK24] gi|289769715|ref|ZP_06529093.1| 50S ribosomal protein L3 [Streptomyces lividans TK24] gi|42559700|sp|Q9L0E0|RL3_STRCO RecName: Full=50S ribosomal protein L3 gi|7321292|emb|CAB82070.1| 50S ribosomal protein L3 [Streptomyces coelicolor A3(2)] gi|289699914|gb|EFD67343.1| 50S ribosomal protein L3 [Streptomyces lividans TK24] Length = 214 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 92/210 (43%), Positives = 126/210 (60%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ GE + V+K Sbjct: 7 GILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ +V+P++ L E R + +G + F G VDVT + GKGF+G Sbjct: 67 PLKGHFAKADVTPRRHLVEIRTAAASEYT-LGQEITAEAFESGVKVDVTAKSKGKGFAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF G +A+HG HR GS G PGRVFK +MAGRMG RVT +NL V +VD Sbjct: 126 MKRHNFKGGKASHGAHRVHRMPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTVHAVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+KG VPG +LVR + K A Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214 >gi|167767803|ref|ZP_02439856.1| hypothetical protein CLOSS21_02338 [Clostridium sp. SS2/1] gi|317497095|ref|ZP_07955422.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 5_1_63FAA] gi|167710542|gb|EDS21121.1| hypothetical protein CLOSS21_02338 [Clostridium sp. SS2/1] gi|291558860|emb|CBL37660.1| LSU ribosomal protein L3P [butyrate-producing bacterium SSC/2] gi|316895640|gb|EFV17795.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 5_1_63FAA] Length = 209 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 88/212 (41%), Positives = 127/212 (59%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ K+GMT ++N +G PVTVL C V +T + +GY AVQVG + K K Sbjct: 1 MKKAILTTKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTEENDGYSAVQVGFVDKKEKG 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G F V+PK+ + EFR + ++ VG F G +D T + GKG+ Sbjct: 61 INKPQKGHFDKAGVAPKRFVREFRFENAEEYT-VGQEIKADIFAAGDKIDATATSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH + HG S HR GS G DP +VFK KKM G+MG RVT++NLE+V Sbjct: 120 AGGIKRHGLKSGPSAHG-SKYHRHAGSNGMASDPSKVFKGKKMPGQMGAERVTIQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + +ILVKG VPG KK S +++++S K+ Sbjct: 179 KVDADQNIILVKGAVPGPKK-SLVMLKESVKA 209 >gi|124003662|ref|ZP_01688510.1| ribosomal protein L3 [Microscilla marina ATCC 23134] gi|123990717|gb|EAY30184.1| ribosomal protein L3 [Microscilla marina ATCC 23134] Length = 208 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 93/212 (43%), Positives = 128/212 (60%), Gaps = 13/212 (6%) Query: 3 SGVVARKLGMTCVYNIEG---RRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 SG++ +K+GMT +Y+ EG ++IP T++ C V +T +GY A+QVG + K K Sbjct: 2 SGLIGKKIGMTSIYSAEGTVAKQIPCTLIQAGPCVVTQVKTTKNDGYEAIQVGFDDKKEK 61 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL---LPVGSVFSPSYFTVGQLVDVTGMTI 116 N KP++G F+ N +PK+KL EF+ KD +L + VG VF G VDV G + Sbjct: 62 NTPKPLQGHFNKANTTPKRKLVEFQFNKDVELGQEITVGDVFEE-----GDFVDVVGTSK 116 Query: 117 GKGFSGAMKRHNFGGLR-ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175 GKGF G +KRH F G+ ATHG R GS G P RVFK KMAGR G RV ++ Sbjct: 117 GKGFQGVVKRHGFHGVGGATHGQHNRQRHPGSIGAASYPARVFKGLKMAGRTGNKRVKIQ 176 Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVR 207 NL +V + ++ LILV G VPGA KNS++++ Sbjct: 177 NLRIVKIYPEQNLILVSGSVPGA-KNSYVIIE 207 >gi|120596989|ref|YP_961563.1| 50S ribosomal protein L3 [Shewanella sp. W3-18-1] gi|146294841|ref|YP_001185265.1| 50S ribosomal protein L3 [Shewanella putrefaciens CN-32] gi|166234594|sp|A4YBY3|RL3_SHEPC RecName: Full=50S ribosomal protein L3 gi|166234596|sp|A1REB4|RL3_SHESW RecName: Full=50S ribosomal protein L3 gi|120557082|gb|ABM23009.1| LSU ribosomal protein L3P [Shewanella sp. W3-18-1] gi|145566531|gb|ABP77466.1| LSU ribosomal protein L3P [Shewanella putrefaciens CN-32] gi|319424580|gb|ADV52654.1| 50S ribosomal protein L3 [Shewanella putrefaciens 200] Length = 212 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 91/206 (44%), Positives = 126/206 (61%), Gaps = 1/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G IPVTV+ + +V +TL+ +GY A+QV G K Sbjct: 1 MAIGLIGRKVGMTRIFTEDGVSIPVTVIEVAGNRVTQVKTLETDGYRALQVTTGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G F+ V + L+E R++ + + + VG+ + F VDVTG + GKG Sbjct: 61 ITKPEAGHFAKSGVEAGRGLWEVRLEDGEGEGIEVGAELNVDIFADVAKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF THG S+SHRS+GS G Q PGRVFK KKM+G MG RVT +NL V Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLVV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205 V VD +R L+LV+G VPGA I+ Sbjct: 181 VRVDVERNLLLVRGAVPGATNGDLII 206 >gi|227494545|ref|ZP_03924861.1| ribosomal protein L3 [Actinomyces coleocanis DSM 15436] gi|226832279|gb|EEH64662.1| ribosomal protein L3 [Actinomyces coleocanis DSM 15436] Length = 221 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 95/209 (45%), Positives = 132/209 (63%), Gaps = 2/209 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RKLGMT V++ +GR +PVTV+ + V RT + +GY A Q+G GE + ++KP Sbjct: 15 LLGRKLGMTQVWDNDGRVVPVTVVQVGTNVVTQVRTEEVDGYTAAQIGFGEVDARRITKP 74 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + G F V+P++ L E R D D +G S F G VDV+G + GKGF+GAM Sbjct: 75 LAGHFEKAGVAPRRHLVEVRTS-DVDAFELGQELLASVFEAGDKVDVSGKSKGKGFAGAM 133 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH F G A+HG +HR GS G PGRVFK +MAGRMG R TV+NL++ +VD Sbjct: 134 KRHGFRGAPASHGAHRNHRKPGSIGACATPGRVFKGVRMAGRMGNVRRTVQNLDIHAVDV 193 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+ G +PG KN+ +LVR+S K A Sbjct: 194 EKGLLLIHGAIPGP-KNAVVLVRNSVKGA 221 >gi|188996239|ref|YP_001930490.1| ribosomal protein L3 [Sulfurihydrogenibium sp. YO3AOP1] gi|226730578|sp|B2V7L3|RL3_SULSY RecName: Full=50S ribosomal protein L3 gi|188931306|gb|ACD65936.1| ribosomal protein L3 [Sulfurihydrogenibium sp. YO3AOP1] Length = 226 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 89/209 (42%), Positives = 127/209 (60%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ + G+ IPVTV+ C V RT +K+GY AV + GE K KN Sbjct: 1 MPKGIIGKKIGMTKVF-VNGKAIPVTVIQAGPCYVAYTRTQEKDGYNAVALTFGERKEKN 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + KP+ F N+ P K + EF ++ + + P + + F G LVD+TG + G+GF Sbjct: 60 IPKPLLAIFKKANIKPAKVIKEFPLKDGETVEPGQEIRIENVFEKGDLVDITGKSKGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 + MKR +F G +HG HR+ GS GCR +PGRV+K K+MAG G VTV LEVV Sbjct: 120 TSVMKRWDFAGFPKSHGHRY-HRAVGSIGCRTEPGRVWKTKRMAGHYGNETVTVLGLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 + ++ +ILVKG VPGA NS + ++ S Sbjct: 179 DIIPEKNVILVKGSVPGA-PNSTVFLKQS 206 >gi|320529796|ref|ZP_08030873.1| 50S ribosomal protein L3 [Selenomonas artemidis F0399] gi|320137814|gb|EFW29719.1| 50S ribosomal protein L3 [Selenomonas artemidis F0399] Length = 220 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 98/215 (45%), Positives = 130/215 (60%), Gaps = 5/215 (2%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RKLGMT ++ EGR +PVTV+ N V+ ++T + +GY AVQ+G G+ K KNV+KP Sbjct: 8 ILGRKLGMTQIFTEEGRVVPVTVVESGNNLVLRNKTNETDGYNAVQIGFGDVKEKNVTKP 67 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 ++G F V + + E R+ VG F G LVDV G + GKGF+G + Sbjct: 68 LKGQFEKAGVKAVRFIREMRLSAPSK-YNVGDTIGVDIFAEGDLVDVVGTSKGKGFAGGI 126 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCR-QDP-GRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 KRHNF HG S SHR GSTG P GRV K KK+ GRMGG RVTV+ L VV V Sbjct: 127 KRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLTVVRV 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 D R LIL+KG +PG KK +++++D+ K A K Sbjct: 186 DTDRNLILIKGAIPGPKK-GFVVIKDTVKPAKAAK 219 >gi|126176355|ref|YP_001052504.1| 50S ribosomal protein L3 [Shewanella baltica OS155] gi|152998749|ref|YP_001364430.1| 50S ribosomal protein L3 [Shewanella baltica OS185] gi|160873326|ref|YP_001552642.1| 50S ribosomal protein L3 [Shewanella baltica OS195] gi|217975201|ref|YP_002359952.1| 50S ribosomal protein L3 [Shewanella baltica OS223] gi|304412765|ref|ZP_07394367.1| 50S ribosomal protein L3 [Shewanella baltica OS183] gi|307307429|ref|ZP_07587164.1| 50S ribosomal protein L3 [Shewanella baltica BA175] gi|166234591|sp|A3DA72|RL3_SHEB5 RecName: Full=50S ribosomal protein L3 gi|166234592|sp|A6WHS8|RL3_SHEB8 RecName: Full=50S ribosomal protein L3 gi|189029479|sp|A9KWA2|RL3_SHEB9 RecName: Full=50S ribosomal protein L3 gi|254803689|sp|B8EBK5|RL3_SHEB2 RecName: Full=50S ribosomal protein L3 gi|125999560|gb|ABN63635.1| LSU ribosomal protein L3P [Shewanella baltica OS155] gi|151363367|gb|ABS06367.1| ribosomal protein L3 [Shewanella baltica OS185] gi|160858848|gb|ABX47382.1| ribosomal protein L3 [Shewanella baltica OS195] gi|217500336|gb|ACK48529.1| ribosomal protein L3 [Shewanella baltica OS223] gi|304348845|gb|EFM13261.1| 50S ribosomal protein L3 [Shewanella baltica OS183] gi|306910217|gb|EFN40650.1| 50S ribosomal protein L3 [Shewanella baltica BA175] gi|315265553|gb|ADT92406.1| 50S ribosomal protein L3 [Shewanella baltica OS678] Length = 212 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 92/206 (44%), Positives = 125/206 (60%), Gaps = 1/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G IPVTV+ + +V +TL+ +GY A+QV G K Sbjct: 1 MAIGLIGRKVGMTRIFTEDGVSIPVTVIEVAGNRVTQVKTLETDGYRALQVTTGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFR-VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G F+ V + L+E R V + + + VG+ + F VDVTG + GKG Sbjct: 61 ITKPEAGHFAKSGVEAGRGLWEMRLVDGEGEGIEVGAELNVDIFADVAKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF THG S+SHRS+GS G Q PGRVFK KKM+G MG RVT +NL V Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLVV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205 V VD +R L+LV+G VPGA I+ Sbjct: 181 VRVDVERNLLLVRGAVPGATNGDLII 206 >gi|320451300|ref|YP_004203396.1| 50S ribosomal protein L3 [Thermus scotoductus SA-01] gi|320151469|gb|ADW22847.1| 50S ribosomal protein L3 [Thermus scotoductus SA-01] Length = 206 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 98/210 (46%), Positives = 124/210 (59%), Gaps = 7/210 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ K+GMT +Y E R +PVTV+ C VV RT +K+GY AVQ+G K V++ Sbjct: 3 GILGMKVGMTRIYR-EDRAVPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLPQNPKRVNR 61 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 PM+G F+ V P + L E R D P G V + F G+ VDVTG + G+G +G Sbjct: 62 PMKGHFARAGVGPVRILKEIR-----DFNPEGDVVTVEIFKAGERVDVTGTSKGRGTAGV 116 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR NF G +HG HR GS G R+ PGRV+K KKMAGR G RVTV NLEVV V Sbjct: 117 MKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGRYGAERVTVMNLEVVDVI 176 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + L+LVKG VPG +LVR + K A Sbjct: 177 PEENLLLVKGAVPGP-NGGLVLVRQTKKVA 205 >gi|237736170|ref|ZP_04566651.1| LSU ribosomal protein L3P [Fusobacterium mortiferum ATCC 9817] gi|229421723|gb|EEO36770.1| LSU ribosomal protein L3P [Fusobacterium mortiferum ATCC 9817] Length = 208 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 92/209 (44%), Positives = 134/209 (64%), Gaps = 3/209 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++A+K+GMT ++ +G+ IPVTV+ V+ +T++ +GY A+Q+G E K KN + Sbjct: 2 SGILAKKIGMTQIFE-DGKFIPVTVVEAGPNFVLQKKTVENDGYTALQLGFDEKKEKNTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F V+P++ + E RV + +G + VD+TG + GKG SG Sbjct: 61 KPVMGIFKKAGVNPQRFVKELRVDSVEGY-ELGQEIKVDVLAGVEFVDITGTSKGKGTSG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGG RA+HGVS +HR GS G PG+V K K+MAG+ G VTV+NL+VV V Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSTWPGKVLKGKRMAGQYGNETVTVQNLKVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D + L+L+KG VPG+ KNS+I+V+ + K Sbjct: 180 DAENNLLLIKGAVPGS-KNSYIVVKPAVK 207 >gi|282899952|ref|ZP_06307913.1| Ribosomal protein L3 [Cylindrospermopsis raciborskii CS-505] gi|281195222|gb|EFA70158.1| Ribosomal protein L3 [Cylindrospermopsis raciborskii CS-505] Length = 212 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 89/197 (45%), Positives = 122/197 (61%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT +++ G IPVTV+ C V +T +GY A+QVG GE K K Sbjct: 1 MSVGILGTKLGMTQIFDEAGVSIPVTVIQAGPCTVTQVKTQPTDGYCAIQVGYGEVKPKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP G + + P + L E+R D +G F+VGQ+VDV G +IG+GF Sbjct: 61 LNKPKLGHLAKSSAGPVRYLNEYRTDAAGDYA-LGQEIKADIFSVGQIVDVIGTSIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KR+NFG +HG S +HR+ GS G PGRV+ K+MAGR+GG+RVTV+ L VV Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGSRVTVRKLTVV 178 Query: 181 SVDDKRGLILVKGCVPG 197 VD +R LIL+KG +PG Sbjct: 179 KVDAERNLILIKGAIPG 195 >gi|94987402|ref|YP_595335.1| 50S ribosomal protein L3 [Lawsonia intracellularis PHE/MN1-00] gi|123385030|sp|Q1MPR3|RL3_LAWIP RecName: Full=50S ribosomal protein L3 gi|94731651|emb|CAJ55014.1| 50S ribosomal protein L3 [Lawsonia intracellularis PHE/MN1-00] Length = 210 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 90/203 (44%), Positives = 126/203 (62%), Gaps = 1/203 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT V+ G +PVTV+ C +V +T++K GY A+Q+ GE K K+VSK Sbjct: 6 GILGQKLGMTQVFGGNGFAVPVTVVQAGPCPIVQIKTVEKEGYNALQIAFGEGKKKHVSK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 M+G FS +S +K+ E R++ VG V + F+VG V +TG +IGKGF GA Sbjct: 66 SMQGHFSKAGLSLYRKIQEVRLKGSLTSYEVGQVLTVGLFSVGDKVKITGKSIGKGFQGA 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 M+R NF G + +HG HR+ GS G PG VFK KKMAG G +VTV+NL VV + Sbjct: 126 MRRWNFAGSKDSHGCEKVHRAAGSIGNNTFPGHVFKGKKMAGHWGTEKVTVQNLVVVDIR 185 Query: 184 DKRGLILVKGCVPGAKKNSWILV 206 + +IL+ G VPG KNS++ + Sbjct: 186 PEDNIILIHGSVPGP-KNSFLFI 207 >gi|212288599|sp|A2SLF7|RL3_METPP RecName: Full=50S ribosomal protein L3 Length = 226 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 96/217 (44%), Positives = 127/217 (58%), Gaps = 14/217 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ RK+GM ++ +G +PVTVL + N +V +T++ +GY A+QV G K V Sbjct: 9 RLGLLGRKVGMMRIFTDDGDAVPVTVLDVSNNRVTQVKTVETDGYSAIQVTFGARKASRV 68 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQ-------KDDDLLPVGSVFSPSYFTVGQLVDVTGM 114 +KP G + V + L EF V K LPVG F GQ VDV G Sbjct: 69 TKPEAGHLAKAGVEAGEILREFAVSAEVAAEYKPGGTLPVG------LFAAGQKVDVQGT 122 Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 +IGKGF+G +KRHNFG RA+HG S SH GS QDPGRVF KKM+G G T Sbjct: 123 SIGKGFTGTIKRHNFGSQRASHGNSRSHNVPGSISMAQDPGRVFPGKKMSGHRGDVTKTT 182 Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +NL++V VD+ R L+LV+G VPGA KN ++ VR + K Sbjct: 183 QNLDIVRVDEARQLLLVRGAVPGA-KNGFVTVRPAVK 218 >gi|297170808|gb|ADI21828.1| ribosomal protein L3 [uncultured gamma proteobacterium HF0130_25M15] Length = 305 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 91/211 (43%), Positives = 133/211 (63%), Gaps = 4/211 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K GMT V+ +GR +PVT++ + + +T +GY A+QV G+ KN K Sbjct: 3 GIVGKKCGMTRVFTDDGRSVPVTIVQANPNLINRIKTEATDGYDAIQVLTGQT-TKNPKK 61 Query: 64 PMRGFF-SSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 P G ++ N KL EFR+ ++ + + G + YF G+LVDV+G +IGKG++ Sbjct: 62 PDSGQIKTNPNEKLSHKLHEFRLNANELEQVDTGKEITVDYFEKGELVDVSGNSIGKGYA 121 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNF ATHG S++HR+ GS G Q PGRVFK KKMAGRMG + T++NLEV+ Sbjct: 122 GVIKRHNFKTQDATHGNSLAHRAPGSIGQNQTPGRVFKGKKMAGRMGNVKKTMQNLEVID 181 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D R LI +KG + G +NS++++ S KS Sbjct: 182 IDSDRNLIFIKGSIAG-HENSFVVITPSIKS 211 >gi|326799127|ref|YP_004316946.1| 50S ribosomal protein L3 [Sphingobacterium sp. 21] gi|326549891|gb|ADZ78276.1| 50S ribosomal protein L3 [Sphingobacterium sp. 21] Length = 205 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 88/205 (42%), Positives = 128/205 (62%), Gaps = 4/205 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ EG+ IP TV+ C V RT++ +GY A+Q+ E K KN + Sbjct: 2 SGIIGKKVGMTSIFDAEGKNIPCTVIEAGPCVVTQIRTVENDGYTAIQLAFDEKKEKNTT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 ++G F+ N +PK+KL EF V ++ L G V + F G +DV G + GKGF G Sbjct: 62 ASLKGHFAKANTTPKRKLVEFEVFPEEKNL--GDVVTVDIFAEGDYIDVVGTSKGKGFQG 119 Query: 123 AMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG+ THG R+ GS G P RVFK +MAGR GG+RV V+NL+V+ Sbjct: 120 VVKRHGFGGVGGQTHGQHNRMRAPGSLGASSWPSRVFKGMRMAGRTGGDRVKVQNLQVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 V ++ L++V G VPGA K S+++V Sbjct: 180 VYPEKNLLVVSGSVPGA-KGSYVIV 203 >gi|119468280|ref|ZP_01611406.1| 50S ribosomal subunit protein L3 [Alteromonadales bacterium TW-7] gi|119448273|gb|EAW29537.1| 50S ribosomal subunit protein L3 [Alteromonadales bacterium TW-7] Length = 211 Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 90/198 (45%), Positives = 120/198 (60%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ ++ ++ +GY A+QV AG K Sbjct: 1 MALGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRIAQIKSDATDGYNALQVTAGTKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ V + L+EFR+ + VG+ + F VDVTG + GKGF Sbjct: 61 VNKASAGHFAKAGVEAGRGLWEFRLNGGEGDFEVGAELTVELFNEINKVDVTGTSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG MG RVT +NLE+V Sbjct: 121 QGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGHMGAERVTTQNLELV 180 Query: 181 SVDDKRGLILVKGCVPGA 198 VD +R L+LVKG VPG+ Sbjct: 181 RVDAERNLLLVKGAVPGS 198 >gi|2344833|emb|CAB11435.1| ribosomal protein L3 [Mycobacterium leprae] Length = 217 Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 93/212 (43%), Positives = 125/212 (58%), Gaps = 3/212 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ R +PVTV+ V RTL+ +GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTLEPDGYSAVQLAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP+ G ++S V+P++ L E R+ D VG + F VDVTG + GKG Sbjct: 63 NKPVTGQYNSAGVNPRRYLAELRLDHPDAAAEYEVGQELTAEIFADATYVDVTGTSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV+NL V Sbjct: 123 FSGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + G++L+KG VPG + ++VR + K Sbjct: 183 HKVDTENGVLLIKGAVPG-RTGGLVMVRSAIK 213 >gi|291521898|emb|CBK80191.1| 50S ribosomal protein L3, bacterial [Coprococcus catus GD/7] Length = 209 Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 96/212 (45%), Positives = 129/212 (60%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ K+GMT V++ +G PVTVL C V +T++ +GY AVQVG G+ + K Sbjct: 1 MKKAILTTKVGMTQVFSEDGVLTPVTVLQAGPCVVTQVKTVENDGYSAVQVGFGDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G F+ V+ K+ L EFR++ D + +G F G VD T + GKGF Sbjct: 61 VNKPKKGHFAKAGVTAKRFLKEFRLE-DAESYTLGQEIKADVFVAGDKVDATAKSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G PGRVFK K M G MG RVTV+NLEVV Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGSATTPGRVFKGKHMPGHMGAVRVTVQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 SVD ++ LILVKG VPG KK S +++++S K+ Sbjct: 179 SVDAEKNLILVKGAVPGPKK-SLVMLKESVKA 209 >gi|227499195|ref|ZP_03929330.1| 50S ribosomal protein L3 [Acidaminococcus sp. D21] gi|226904642|gb|EEH90560.1| 50S ribosomal protein L3 [Acidaminococcus sp. D21] Length = 219 Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 91/216 (42%), Positives = 134/216 (62%), Gaps = 5/216 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT ++ +G +PVTV+ C V+ ++T + +GY A+Q+G G+ K K+ Sbjct: 1 MARGILGKKLGMTQIFEADGTLVPVTVVEAGPCVVLANKTEETDGYNAIQLGFGDIKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+GFF V+P K + EFR+ + + VG + F G LVD G++ GKGF Sbjct: 61 VNKPMKGFFDKAGVAPVKFVREFRLAEASE-YKVGDKIAADIFAAGDLVDAIGVSRGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTG-CRQDP-GRVFKNKKMAGRMGGNRVTVKNLE 178 +G ++RHNF HG S SHR GS G P GRV K KK+ GR+GG TV+ L Sbjct: 120 AGTIERHNFARGPMKHG-SKSHREPGSNGPMHSGPGGRVIKGKKLPGRLGGQSATVQRLT 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 + VD +R LI+VKG VPGA +++++RD+ + V Sbjct: 179 IAKVDAERNLIMVKGSVPGA-AGTFLMLRDTVRPVV 213 >gi|113869431|ref|YP_727920.1| 50S ribosomal protein L3 [Ralstonia eutropha H16] gi|194291022|ref|YP_002006929.1| 50S ribosomal protein l3 [Cupriavidus taiwanensis LMG 19424] gi|123133539|sp|Q0K619|RL3_RALEH RecName: Full=50S ribosomal protein L3 gi|226725158|sp|B3R7S3|RL3_CUPTR RecName: Full=50S ribosomal protein L3 gi|113528207|emb|CAJ94552.1| LSU ribosomal protein L3 [Ralstonia eutropha H16] gi|193224857|emb|CAQ70868.1| 50S ribosomal subunit protein L3 [Cupriavidus taiwanensis LMG 19424] Length = 216 Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ + + +V +T + +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTDDGEAIPVTVVEVGDNRVTQIKTDETDGYTAVQVTFGARRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + + EFR+ L G S F VGQ +DV G+TIGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEIIREFRIDAAKAAELQAGGSLSVDLFEVGQKIDVQGVTIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR++F RATHG S SH GS G QDPGRVF K+M G +G TV+NLE+ Sbjct: 121 YAGTIKRYHFASGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTRTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D +R L+LVKG +PG+ KN ++V + K+ Sbjct: 181 AKIDAERKLLLVKGAIPGS-KNGKVIVTPAVKA 212 >gi|71842315|ref|YP_277403.1| ribosomal protein L3 [Emiliania huxleyi] gi|109893084|sp|Q4G364|RK3_EMIHU RecName: Full=50S ribosomal protein L3, chloroplastic gi|52547746|gb|AAU81908.1| ribosomal protein L3 [Emiliania huxleyi] gi|60101558|gb|AAX13902.1| ribosomal protein L3 [Emiliania huxleyi] Length = 207 Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 87/201 (43%), Positives = 125/201 (62%), Gaps = 2/201 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M +G+ RK+GMT +++ +G IPVT++ D CQV +T +GY A+QVG E K+ Sbjct: 1 MTAGIFGRKIGMTQIFDKDGSAIPVTLVKADPCQVCQIKTTKTDGYDAIQVGYLEEKLSK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SKP++G + +K EFRV+ D + +G + S F+VGQ V VTG +IGKGF Sbjct: 61 ISKPIQGHLQKCGSTGYRKFGEFRVE-DPETYNLGDQITTSAFSVGQKVRVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRHNF THG S +HR GS G PGRV+ KKMAG +G + T+KN E++ Sbjct: 120 AGNQKRHNFSRGPMTHG-SKNHRLPGSIGAGSTPGRVYPGKKMAGHLGNTKTTIKNSEIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKN 201 V +K ++++KG +PG KN Sbjct: 179 FVSEKENILILKGSLPGKAKN 199 >gi|83748149|ref|ZP_00945176.1| LSU ribosomal protein L3P [Ralstonia solanacearum UW551] gi|83725117|gb|EAP72268.1| LSU ribosomal protein L3P [Ralstonia solanacearum UW551] Length = 220 Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 93/213 (43%), Positives = 128/213 (60%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V+ +G IPVTVL + +V +T + +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + + EFR+ L +G F+ GQ +DV G TIGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEIIAEFRIDAAKAAELKLGDTIDVDLFSAGQKIDVQGTTIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG TV+NL + Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LVKG VPGA K+ +++V + K+ Sbjct: 181 VRVDAERKLLLVKGAVPGA-KSGFVVVSPAVKA 212 >gi|257054470|ref|YP_003132302.1| 50S ribosomal protein L3P [Saccharomonospora viridis DSM 43017] gi|256584342|gb|ACU95475.1| LSU ribosomal protein L3P [Saccharomonospora viridis DSM 43017] Length = 213 Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 92/212 (43%), Positives = 123/212 (58%), Gaps = 2/212 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ V R+ +K+GY AVQ+ G + V+K Sbjct: 3 GILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQVRSKEKDGYSAVQLAFGNIDPRRVNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ L E R D D VG + F+ G +VDVTG + GKGF+G Sbjct: 63 PQAGHFEKAGVTPRRYLAELRTS-DADSYEVGQEITADVFSDGAVVDVTGTSKGKGFAGV 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G A+HG +HR+ GS G PGRVFK K+MAGR G RVT + L + SV Sbjct: 122 MKRHGFAGQGASHGNQATHRAPGSIGGAATPGRVFKGKRMAGRAGNKRVTTQGLTIHSVR 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 + GL+L+KG VPG K + VR + K V Sbjct: 182 AEEGLLLIKGAVPG-PKGGLVFVRSAAKGGVT 212 >gi|124268627|ref|YP_001022631.1| 50S ribosomal protein L3 [Methylibium petroleiphilum PM1] gi|124261402|gb|ABM96396.1| LSU ribosomal protein L3P [Methylibium petroleiphilum PM1] Length = 247 Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 96/217 (44%), Positives = 127/217 (58%), Gaps = 14/217 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ RK+GM ++ +G +PVTVL + N +V +T++ +GY A+QV G K V Sbjct: 30 RLGLLGRKVGMMRIFTDDGDAVPVTVLDVSNNRVTQVKTVETDGYSAIQVTFGARKASRV 89 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQ-------KDDDLLPVGSVFSPSYFTVGQLVDVTGM 114 +KP G + V + L EF V K LPVG F GQ VDV G Sbjct: 90 TKPEAGHLAKAGVEAGEILREFAVSAEVAAEYKPGGTLPVG------LFAAGQKVDVQGT 143 Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 +IGKGF+G +KRHNFG RA+HG S SH GS QDPGRVF KKM+G G T Sbjct: 144 SIGKGFTGTIKRHNFGSQRASHGNSRSHNVPGSISMAQDPGRVFPGKKMSGHRGDVTKTT 203 Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +NL++V VD+ R L+LV+G VPGA KN ++ VR + K Sbjct: 204 QNLDIVRVDEARQLLLVRGAVPGA-KNGFVTVRPAVK 239 >gi|239918199|ref|YP_002957757.1| LSU ribosomal protein L3P [Micrococcus luteus NCTC 2665] gi|281415610|ref|ZP_06247352.1| 50S ribosomal protein L3 [Micrococcus luteus NCTC 2665] gi|239839406|gb|ACS31203.1| LSU ribosomal protein L3P [Micrococcus luteus NCTC 2665] Length = 216 Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 90/210 (42%), Positives = 124/210 (59%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ + + IPVTV+ D V R+ + +GY AVQ+ G+ + V+K Sbjct: 9 GLLGTKLGMTQVWDEDNKLIPVTVVKADPNVVTQLRSEETDGYTAVQIAYGQIDPRRVTK 68 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+P++ L E R D +G + F GQ VDV G T GKGF+GA Sbjct: 69 PLAGHFEKAGVTPRRHLVELRT-ADAAEYSLGQDVTVEVFEAGQKVDVVGTTKGKGFAGA 127 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G+ A+HG +HR GS G PGRVFK ++M GRMG R T NL + +D Sbjct: 128 MKRHGFAGVGASHGAHKNHRKPGSVGGASTPGRVFKGQRMPGRMGAVRQTTMNLTLHGID 187 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + L+L+KG VPG+ K +LVR + K A Sbjct: 188 VENNLLLIKGAVPGS-KGQVVLVRSAVKGA 216 >gi|289706533|ref|ZP_06502883.1| 50S ribosomal protein L3 [Micrococcus luteus SK58] gi|289556668|gb|EFD50009.1| 50S ribosomal protein L3 [Micrococcus luteus SK58] Length = 216 Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 90/210 (42%), Positives = 124/210 (59%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ + + IPVTV+ D V R+ + +GY AVQ+ G+ + V+K Sbjct: 9 GLLGTKLGMTQVWDEDNKLIPVTVVKADPNVVTQLRSEETDGYTAVQIAYGQIDPRRVTK 68 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+P++ L E R D +G + F GQ VDV G T GKGF+GA Sbjct: 69 PLAGHFEKAGVTPRRHLVELRT-ADAAEYELGQDVTVEVFEAGQKVDVVGTTKGKGFAGA 127 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G+ A+HG +HR GS G PGRVFK ++M GRMG R T NL + +D Sbjct: 128 MKRHGFAGVGASHGAHKNHRKPGSVGGASTPGRVFKGQRMPGRMGAVRQTTMNLTLHGID 187 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + L+L+KG VPG+ K +LVR + K A Sbjct: 188 VENNLLLIKGAVPGS-KGQVVLVRSAVKGA 216 >gi|284049257|ref|YP_003399596.1| 50S ribosomal protein L3 [Acidaminococcus fermentans DSM 20731] gi|283953478|gb|ADB48281.1| 50S ribosomal protein L3 [Acidaminococcus fermentans DSM 20731] Length = 219 Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 95/216 (43%), Positives = 131/216 (60%), Gaps = 5/216 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT ++ +G +PVTV+ C V+ ++T +K+GY AVQ+G G+ K K Sbjct: 1 MAKGILGKKLGMTQIFEADGTLVPVTVVEAGPCVVLQNKTEEKDGYNAVQLGFGDIKEKQ 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+GFF V+P K + E R+ + VG + F G LVD G++ GKGF Sbjct: 61 VNKPMKGFFDKAGVAPVKVVREVRLDAPSE-YKVGDKIAADIFAAGDLVDAVGVSRGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTG-CRQDP-GRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KRHNF HG S SHR GS G P GRV K KK+ GRMGG TV+ L Sbjct: 120 AGTIKRHNFARGPMKHG-SKSHREPGSNGPMHSGPGGRVIKGKKLPGRMGGISATVQRLT 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 + VD R LI+VKG VPGA +++L+RD+ + V Sbjct: 179 IAKVDKDRNLIMVKGSVPGA-AGTFLLLRDTVRPDV 213 >gi|296168557|ref|ZP_06850361.1| 50S ribosomal protein L3 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896620|gb|EFG76259.1| 50S ribosomal protein L3 [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 217 Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 93/214 (43%), Positives = 128/214 (59%), Gaps = 7/214 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ R +PVTV+ V RT +++GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDENNRIVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL----LPVGSVFSPSYFTVGQLVDVTGMTIG 117 +KP+ G +S+ V+P++ L E R+ DD+ VG + F G VDVTG + G Sbjct: 63 NKPVTGQYSAAGVNPRRHLAELRL--DDEAAAGEYEVGQELTAEIFADGSYVDVTGTSKG 120 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF+G MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV+NL Sbjct: 121 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNL 180 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD + G++L+KG VPG + ++VR + K Sbjct: 181 VVHKVDTENGVLLIKGAVPG-RTGGLVMVRSAIK 213 >gi|289579145|ref|YP_003477772.1| 50S ribosomal protein L3 [Thermoanaerobacter italicus Ab9] gi|297545329|ref|YP_003677631.1| 50S ribosomal protein L3 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|289528858|gb|ADD03210.1| 50S ribosomal protein L3 [Thermoanaerobacter italicus Ab9] gi|296843104|gb|ADH61620.1| 50S ribosomal protein L3 [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 210 Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 98/214 (45%), Positives = 131/214 (61%), Gaps = 7/214 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ RK GMT +++ +G IPVTV+ C VV +T + +GY A+QVG G+ K K Sbjct: 1 MKKGILGRKHGMTQIFDEKGEVIPVTVIEAGPCVVVQKKTTETDGYNAIQVGFGDVKEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118 ++KP+ G F V K+ L EFR+ DD+ VGS F G VDVTG++ GK Sbjct: 61 LTKPLIGHFKKAGVPFKRYLREFRL---DDVSGYEVGSEIKVDIFKPGDRVDVTGISKGK 117 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF+G +KR+ +HG S HR GS G DPGR FK K M G MG RVT++NLE Sbjct: 118 GFAGVVKRYGASRGPMSHG-SKYHRRVGSMGATTDPGRTFKGKIMPGHMGHKRVTIQNLE 176 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VV VD + L+LVKG VPG K S ++++DS KS Sbjct: 177 VVKVDPELNLLLVKGSVPGP-KGSLLIIKDSVKS 209 >gi|68536923|ref|YP_251628.1| 50S ribosomal protein L3 [Corynebacterium jeikeium K411] gi|109893423|sp|Q4JT47|RL3_CORJK RecName: Full=50S ribosomal protein L3 gi|68264522|emb|CAI38010.1| 50S ribosomal protein L3 [Corynebacterium jeikeium K411] Length = 218 Score = 165 bits (417), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 89/213 (41%), Positives = 125/213 (58%), Gaps = 2/213 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT +++ E R +PVTV+ C V R+ + +GY AVQ+ GE + V+K Sbjct: 8 GILGKKLGMTQIFDEENRVVPVTVVEAGPCVVTQVRSKETDGYEAVQIAFGEIDPRKVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ + E RV D VG + F + VDVTG T GKG++G Sbjct: 68 PAAGHFKKAGVTPRRHVAEIRVA-DASSYEVGQDVTVDIFNDVKFVDVTGTTKGKGYAGG 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G A HG +HR GS G PGRVFK K+MAGRMG +RVT +NL++ VD Sbjct: 127 MKRHGFAGQGAAHGNQAAHRRVGSIGQAATPGRVFKGKRMAGRMGNDRVTQQNLKLAKVD 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 + L+L+KG VPG ++V+ + K + Sbjct: 187 AESNLLLIKGAVPGV-NGGLVVVKTAVKGGAHA 218 >gi|146329256|ref|YP_001210151.1| 50S ribosomal protein L3 [Dichelobacter nodosus VCS1703A] gi|166233139|sp|A5EX82|RL3_DICNV RecName: Full=50S ribosomal protein L3 gi|146232726|gb|ABQ13704.1| 50S ribosomal protein L3 [Dichelobacter nodosus VCS1703A] Length = 212 Score = 165 bits (417), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V +K+GMT +++ EG VTV+ + + +T + +GY AVQV G K Sbjct: 1 MTMGLVGQKVGMTRIFDEEGTASAVTVIEIQPNIISQIKTDETDGYHAVQVSVGHRKSSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +K + G F+ N+S + EFRV ++ VG + F GQ VDV +IGKG Sbjct: 61 TTKALAGHFAKANISAAALVKEFRVDSEEIAKYEVGKPVELAIFEQGQRVDVRARSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KRHNF G R THG S+SHR GS G Q PGRVFK KKM+G MG +V+N+E+ Sbjct: 121 YAGTIKRHNFRGQRKTHGNSVSHRVPGSIGQNQTPGRVFKGKKMSGHMGNKMCSVQNIEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D +R L+L+KG VPGA K ++++R S K+ Sbjct: 181 ARIDVERNLLLLKGSVPGA-KGGYVVIRPSVKA 212 >gi|172039995|ref|YP_001799709.1| 50S ribosomal protein L3 [Corynebacterium urealyticum DSM 7109] gi|226725155|sp|B1VET6|RL3_CORU7 RecName: Full=50S ribosomal protein L3 gi|171851299|emb|CAQ04275.1| 50S ribosomal protein L3 [Corynebacterium urealyticum DSM 7109] Length = 218 Score = 165 bits (417), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 92/203 (45%), Positives = 119/203 (58%), Gaps = 3/203 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT +++ E R +PVTV+ C V RT D +GY AVQ+ GE + V+K Sbjct: 8 GILGKKLGMTQIFDDENRVVPVTVVEAGPCVVTQVRTKDIDGYEAVQIAFGEIDPRKVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ + E RV D VG + F VDVTG + G GF+G Sbjct: 68 PESGHFKKAGVTPRRHVAEIRVA-DASGYEVGQDVTVEIFNEVDFVDVTGTSKGHGFAGG 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G A HG +HR G G PGRVFK K+MAGRMG NRVT++NL+V VD Sbjct: 127 MKRHGFAGQGAAHGNQAAHRRVGGIGGAATPGRVFKGKRMAGRMGNNRVTMQNLKVAKVD 186 Query: 184 DKRGLILVKGCVPGAKKNSWILV 206 L+L+KG VPG N I+V Sbjct: 187 TDSNLLLIKGAVPGI--NGGIVV 207 >gi|32491292|ref|NP_871546.1| hypothetical protein WGLp543 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|42559632|sp|Q8D212|RL3_WIGBR RecName: Full=50S ribosomal protein L3 gi|25166499|dbj|BAC24689.1| rplC [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 215 Score = 165 bits (417), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 89/202 (44%), Positives = 130/202 (64%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT +N +G IPVTV+ + + ++V + ++K+GY ++QV G K +K Sbjct: 3 GLIGRKIGMTRTFNSDGSSIPVTVIKISDNKIVQIKKIEKDGYSSIQVTTGVKKFSRENK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 + G F V + L+EF+V K+ VG V S + F V++TG++ GKGFSG Sbjct: 63 SIIGHFKKNKVELGRGLWEFKVDKNSKFY-VGQVLSINTFININKVNITGISKGKGFSGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR NF G A+HG S+SHR+ GS G Q PG+VFK KKM+G +G N+ TVKNL VV +D Sbjct: 122 MKRWNFHGQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMSGHLGYNKNTVKNLFVVKID 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 + L+L+KG VPG+K + I+ Sbjct: 182 LEHELLLIKGSVPGSKGSDLII 203 >gi|300702780|ref|YP_003744381.1| 50S ribosomal protein L3 [Ralstonia solanacearum CFBP2957] gi|299070442|emb|CBJ41737.1| 50S ribosomal subunit protein L3 [Ralstonia solanacearum CFBP2957] Length = 220 Score = 165 bits (417), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 93/213 (43%), Positives = 127/213 (59%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V+ +G IPVTVL + +V +T + +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + + EFR+ L +G F GQ +DV G TIGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEIIAEFRIDAAKAAELKLGDTIDVDLFAAGQKIDVQGTTIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG TV+NL + Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LVKG VPGA K+ +++V + K+ Sbjct: 181 VRVDAERKLLLVKGAVPGA-KSGFVVVSPAVKA 212 >gi|254785079|ref|YP_003072507.1| 50S ribosomal protein L3 [Teredinibacter turnerae T7901] gi|259709742|sp|C5BQ61|RL3_TERTT RecName: Full=50S ribosomal protein L3 gi|237683501|gb|ACR10765.1| ribosomal protein L3 [Teredinibacter turnerae T7901] Length = 214 Score = 165 bits (417), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 90/211 (42%), Positives = 126/211 (59%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ +G +PVTV+ +D ++ ++++ +GY AVQV G + Sbjct: 1 MTIGIVGRKSGMTRIFTDDGLSVPVTVIEVDPNRITQVKSVETDGYAAVQVTVGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ + ++E R + + VG + F GQ VDVTG + GKGF Sbjct: 61 VTKAEAGHFAKAQTEAGRGVWELR-NEAGEAFEVGGQLTVEAFEAGQKVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF ATHG S+SHR+ GS G Q PGRV K KKM+G MG RVT +NLEVV Sbjct: 120 AGTVKRWNFRTQDATHGNSLSHRAPGSIGQCQTPGRVMKGKKMSGHMGAERVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L+L+KG VPGA + +R + K Sbjct: 180 RVDVERNLLLIKGAVPGAPGGD-VFIRPAVK 209 >gi|184200262|ref|YP_001854469.1| 50S ribosomal protein L3 [Kocuria rhizophila DC2201] gi|212288402|sp|B2GIL4|RL3_KOCRD RecName: Full=50S ribosomal protein L3 gi|183580492|dbj|BAG28963.1| 50S ribosomal protein L3 [Kocuria rhizophila DC2201] Length = 218 Score = 165 bits (417), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 92/210 (43%), Positives = 124/210 (59%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ G+ +PVTV+ D+ V R DK+GY AVQ+G G + V+K Sbjct: 11 GLLGTKLGMTQVWDENGKFVPVTVVKADSNVVTQLRNTDKDGYNAVQIGFGAIDPRKVTK 70 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F++ V+P++ + E R D +G S F G VDV G T GKG +G Sbjct: 71 PLAGHFAAAGVTPRRHVVELRTS-DAAEYELGQELSVELFEAGAKVDVVGTTKGKGTAGV 129 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G+ A+HG +HR GS G P RVFK +MAGRMG R T NL V +VD Sbjct: 130 MKRHGFSGVGASHGAHKNHRKPGSIGGASYPARVFKGMRMAGRMGNARHTTMNLTVHAVD 189 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + L+L+KG +PG K S +LVR + K A Sbjct: 190 AENSLLLIKGALPG-PKGSVVLVRSTVKGA 218 >gi|219849887|ref|YP_002464320.1| 50S ribosomal protein L3 [Chloroflexus aggregans DSM 9485] gi|254803662|sp|B8G6S5|RL3_CHLAD RecName: Full=50S ribosomal protein L3 gi|219544146|gb|ACL25884.1| ribosomal protein L3 [Chloroflexus aggregans DSM 9485] Length = 210 Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 93/212 (43%), Positives = 130/212 (61%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GM + EGR IPVTV+ C V RT +++GY AVQ+G E + + Sbjct: 1 MIHGLLGRKIGMMQYFTKEGRAIPVTVIAAGPCIVTQIRTPERDGYSAVQLGYEEVEARK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLL-PVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP +G + + L EF DD L G V + F GQ VD++G + G+G Sbjct: 61 LTKPQQGHLKASGGKMLRYLREFSA--DDPLAHKPGEVVTVELFKPGQKVDISGTSKGRG 118 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRH F G THG S HR+ GS G PGRV+K ++MAGRMGG+RVT++NLEV Sbjct: 119 FAGVVKRHGFRGGPKTHGQSDRHRAPGSIGAGTTPGRVWKGQRMAGRMGGDRVTIQNLEV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V V ++ L+LVKG VPGA +N + +R + K Sbjct: 179 VEVLPEQNLLLVKGSVPGA-RNGLLQIRKAVK 209 >gi|158319543|ref|YP_001512050.1| ribosomal protein L3 [Alkaliphilus oremlandii OhILAs] gi|189042830|sp|A8MLE0|RL3_ALKOO RecName: Full=50S ribosomal protein L3 gi|158139742|gb|ABW18054.1| ribosomal protein L3 [Alkaliphilus oremlandii OhILAs] Length = 210 Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 89/197 (45%), Positives = 122/197 (61%), Gaps = 2/197 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT +++ G IPVTV+ ++ V +T++K+GY A+QVG G+ +NV+K Sbjct: 3 GLVGRKIGMTQMFDETGLVIPVTVIEVEANAVTQVKTIEKDGYNAIQVGYGQINERNVNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G F V+PK+ L EFR++ + G F G VD++G++ GKGF G Sbjct: 63 PSKGHFDKAGVTPKRSLQEFRLESTEGFT-AGQELKADLFKAGDKVDISGVSKGKGFQGV 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KRHN HG S HR GS G P RVFK KK+AG MG VT++NLEVV VD Sbjct: 122 IKRHNQSRGPMAHG-SRYHRGPGSMGAASYPSRVFKGKKLAGHMGHENVTIQNLEVVKVD 180 Query: 184 DKRGLILVKGCVPGAKK 200 +R L++VKG VPG KK Sbjct: 181 VERNLLIVKGAVPGPKK 197 >gi|323706450|ref|ZP_08118011.1| 50S ribosomal protein L3 [Thermoanaerobacterium xylanolyticum LX-11] gi|323534170|gb|EGB23960.1| 50S ribosomal protein L3 [Thermoanaerobacterium xylanolyticum LX-11] Length = 209 Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 94/212 (44%), Positives = 129/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K GMT ++ + IPVTV+ C VV +T + +GY A+QVG G+ K K Sbjct: 1 MKKAILGKKHGMTQIF-VGNEMIPVTVVEAGPCVVVQKKTKENDGYDAIQVGFGDVKEKR 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + KP++G F+ NV KK L EFR+ D VGS F+VG VDV G + GKGF Sbjct: 60 LIKPLKGHFAKANVPFKKYLREFRLD-DISSYEVGSEIKADIFSVGDRVDVIGTSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR+N HG S HR GS G DP R FK K++ G MG RVT++NLEVV Sbjct: 119 AGVVKRYNANRGPMAHG-SKYHRRPGSMGASSDPSRTFKGKRLPGHMGNERVTIQNLEVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++ L+L+KG VPG K S +++RD+ KS Sbjct: 178 KVDPEKNLLLIKGSVPGV-KGSLLMIRDTVKS 208 >gi|237742672|ref|ZP_04573153.1| LSU ribosomal protein L3P [Fusobacterium sp. 4_1_13] gi|256846067|ref|ZP_05551525.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_36A2] gi|294784802|ref|ZP_06750090.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_27] gi|229430320|gb|EEO40532.1| LSU ribosomal protein L3P [Fusobacterium sp. 4_1_13] gi|256719626|gb|EEU33181.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_36A2] gi|294486516|gb|EFG33878.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_27] Length = 211 Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT ++ +G+ +PVTV+ V+ +T +K+GY+A+Q+G E K KN + Sbjct: 2 SGILGKKIGMTQIFE-DGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ V P++ + E V+ D +G + VD+TG + GKG SG Sbjct: 61 KPLMGIFNKAGVKPQRFVKELAVESVDGY-ELGQEIKVDVLAEVEYVDITGTSKGKGTSG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGG RA+HGVS +HR GS G PG+V K K+MAG+ G VTV+NL+VV V Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D + L+L+KG VPGA KN ++++R + K + Sbjct: 180 DAEHNLLLIKGAVPGA-KNGYLVIRPAVKKVI 210 >gi|238763730|ref|ZP_04624689.1| 50S ribosomal protein L3 [Yersinia kristensenii ATCC 33638] gi|238698032|gb|EEP90790.1| 50S ribosomal protein L3 [Yersinia kristensenii ATCC 33638] Length = 209 Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 91/202 (45%), Positives = 126/202 (62%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V ++L+ +GY AVQV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYRAVQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+ FR+ + + G S F + VDVTG + GKGF+G Sbjct: 63 PEAGHFAKAGVEAGRGLWGFRLPEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG +G RVTV++L+VV VD Sbjct: 122 VKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +R L+LVKG VPGA + I+ Sbjct: 182 AERNLLLVKGAVPGATGGNLIV 203 >gi|121592712|ref|YP_984608.1| 50S ribosomal protein L3 [Acidovorax sp. JS42] gi|222109493|ref|YP_002551757.1| 50S ribosomal protein l3 [Acidovorax ebreus TPSY] gi|166233110|sp|A1W2Q7|RL3_ACISJ RecName: Full=50S ribosomal protein L3 gi|254803670|sp|B9MB73|RL3_DIAST RecName: Full=50S ribosomal protein L3 gi|120604792|gb|ABM40532.1| LSU ribosomal protein L3P [Acidovorax sp. JS42] gi|221728937|gb|ACM31757.1| ribosomal protein L3 [Acidovorax ebreus TPSY] Length = 224 Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 92/216 (42%), Positives = 131/216 (60%), Gaps = 13/216 (6%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G +PVTV+ + N +V +T + +GY+++QV G K V+K Sbjct: 8 GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVSLQVTFGSRKASRVTK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKD-------DDLLPVGSVFSPSYFTVGQLVDVTGMTI 116 P G + V + + EFRV + +PV VF+ VGQ VDV G +I Sbjct: 68 PEAGHLAKAGVEAGEIIREFRVTPEVAGKYAAGAAVPVADVFA-----VGQKVDVQGTSI 122 Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 GKGF+G +KRHNFG RA+HG S SH GS G QDPGRVF KKM G +G VT +N Sbjct: 123 GKGFAGTIKRHNFGSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKKMTGHLGDVTVTTQN 182 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 L+VV +D+ R L+L+KG VPG+ K ++ VR + K+ Sbjct: 183 LDVVRIDEARQLLLIKGAVPGS-KGGFVTVRPAVKA 217 >gi|78357300|ref|YP_388749.1| 50S ribosomal protein L3 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|109893427|sp|Q30Z42|RL3_DESDG RecName: Full=50S ribosomal protein L3 gi|78219705|gb|ABB39054.1| LSU ribosomal protein L3P [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 209 Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 93/206 (45%), Positives = 128/206 (62%), Gaps = 2/206 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 + G++ RK+GMT ++ +G + VTV+ C V+ + K+GY AVQ+G EAK K+V Sbjct: 4 KMGILGRKIGMTRIFANDGSAVAVTVIQAGPCPVIQVKDAAKDGYNAVQIGFEEAKEKHV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP RG + L E R++ + VG + FT G+ V VTG +IGKGF+ Sbjct: 64 NKPARGHMDKAGRGLFRVLREIRLEAPAEQ-KVGDDLTVGLFTPGEFVKVTGTSIGKGFA 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR NFGG+ A+HG HRS GS G PG+V+KNKKMAG MG +VTVK+L+++ Sbjct: 123 GVMKRWNFGGMPASHGHEAVHRSPGSIGHATFPGKVWKNKKMAGHMGARQVTVKSLQIIE 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V + LILVKG VPG KN ++VR Sbjct: 183 VRAEDNLILVKGPVPGP-KNGLVMVR 207 >gi|41410259|ref|NP_963095.1| 50S ribosomal protein L3 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118463063|ref|YP_883606.1| 50S ribosomal protein L3 [Mycobacterium avium 104] gi|254776907|ref|ZP_05218423.1| 50S ribosomal protein L3 [Mycobacterium avium subsp. avium ATCC 25291] gi|81831570|sp|Q73SB3|RL3_MYCPA RecName: Full=50S ribosomal protein L3 gi|166233161|sp|A0QL18|RL3_MYCA1 RecName: Full=50S ribosomal protein L3 gi|41399093|gb|AAS06711.1| RplC [Mycobacterium avium subsp. paratuberculosis K-10] gi|118164350|gb|ABK65247.1| ribosomal protein L3 [Mycobacterium avium 104] Length = 217 Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 127/212 (59%), Gaps = 3/212 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ R +PVTV+ V RT +++GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTPEQDGYSAVQLAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP+ G +++ ++P++ L E R+ D VG + FT G VDVTG + GKG Sbjct: 63 NKPVTGQYAAAGINPRRFLAELRLDNPDAAAEYQVGQELTAEIFTDGSYVDVTGTSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV+NL V Sbjct: 123 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + G++L+KG VPG + ++VR + K Sbjct: 183 HKVDTENGVLLIKGAVPG-RTGGLVMVRSAVK 213 >gi|319948723|ref|ZP_08022844.1| 50S ribosomal protein L3 [Dietzia cinnamea P4] gi|319437625|gb|EFV92624.1| 50S ribosomal protein L3 [Dietzia cinnamea P4] Length = 221 Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 88/210 (41%), Positives = 120/210 (57%), Gaps = 3/210 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ C V RT + +GY AVQ+ G + V+K Sbjct: 8 GILGAKLGMTQVFDENNRVVPVTVVKAGPCVVTGIRTEENDGYNAVQIAFGAVDPRKVTK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 P+ G F V+P++ + E R+ + +G F G VDVTG + GKGF+ Sbjct: 68 PVAGQFEKAGVTPRRHIAEIRLDNAEQAAGYEIGQEIGADVFEDGAFVDVTGTSKGKGFA 127 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F G A+HG HR GS G PGRVFK K MAGRMG RVT NL+V Sbjct: 128 GTMKRHGFAGQGASHGTQAVHRKPGSIGGASTPGRVFKGKAMAGRMGNERVTTMNLKVHK 187 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + G++L+KG +PG + ++VR + K Sbjct: 188 VDAEAGVLLIKGAIPG-RNGGLVMVRSAVK 216 >gi|326334545|ref|ZP_08200756.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325693314|gb|EGD35242.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 205 Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 85/205 (41%), Positives = 129/205 (62%), Gaps = 4/205 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP T++ C V RT + +GY A+Q+G + K K+ + Sbjct: 2 SGLIGKKVGMTSIFDENGKNIPCTIIEAGPCVVTQVRTKEVDGYEALQLGFDDKKEKHTN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F+ +SPKKKL EF Q + +G + +F G+ VDVTG + GKGF G Sbjct: 62 KAAAGHFAKAGISPKKKLIEF--QGFESTYKLGDTITAEFFVEGEFVDVTGTSKGKGFQG 119 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 ++RH FGG+ ++THG R+ GS G P RVFK +MAGRMG +VTV+NL V+ Sbjct: 120 VVRRHGFGGVGQSTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLRVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 V ++ L+++KGCVPG KN+++ + Sbjct: 180 VIPEKNLLILKGCVPG-HKNAYVTI 203 >gi|73542863|ref|YP_297383.1| 50S ribosomal protein L3 [Ralstonia eutropha JMP134] gi|109893544|sp|Q46WE4|RL3_RALEJ RecName: Full=50S ribosomal protein L3 gi|72120276|gb|AAZ62539.1| LSU ribosomal protein L3P [Ralstonia eutropha JMP134] Length = 216 Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ + + +V +T + +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTDDGDSIPVTVVEVGDNRVTQIKTDETDGYTAVQVTFGARRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + + EFR+ L G S F VGQ +DV G+TIGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEIIREFRIDAAKAAELQTGGSLSVDLFEVGQKIDVQGVTIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR++F RATHG S SH GS G QDPGRVF K+M G +G TV+NLE+ Sbjct: 121 YAGTIKRYHFASGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTRTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D +R L+LVKG +PG+ KN ++V + K+ Sbjct: 181 AKIDAERKLLLVKGAIPGS-KNGKVIVTPAVKA 212 >gi|296141115|ref|YP_003648358.1| 50S ribosomal protein L3 [Tsukamurella paurometabola DSM 20162] gi|296029249|gb|ADG80019.1| 50S ribosomal protein L3 [Tsukamurella paurometabola DSM 20162] Length = 218 Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 88/208 (42%), Positives = 125/208 (60%), Gaps = 2/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ V RT +GY AVQ+ G + V+K Sbjct: 8 GILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQIRTEATDGYDAVQIAFGAIDPRKVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F+ V+P++ + E R+ D VG F+ G+ VDVTG++ GKG++G Sbjct: 68 PVSGQFAKAGVTPRRHIAELRIA-DTSEYEVGQELGADVFSGGEFVDVTGISKGKGYAGV 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GL A+HG HR+ GS G PGRVFK +MAGRMG ++VT +NL V VD Sbjct: 127 MKRHGFAGLGASHGAQAVHRAPGSIGGCATPGRVFKGVRMAGRMGSDKVTTQNLTVFKVD 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 G++L+KG +PG +K ++VR + K Sbjct: 187 ADAGVLLIKGAIPG-RKGGLVMVRTAVK 213 >gi|225850735|ref|YP_002730969.1| 50S ribosomal protein L3 [Persephonella marina EX-H1] gi|254803685|sp|C0QQM3|RL3_PERMH RecName: Full=50S ribosomal protein L3 gi|225645055|gb|ACO03241.1| 50S ribosomal protein L3 [Persephonella marina EX-H1] Length = 227 Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 90/201 (44%), Positives = 124/201 (61%), Gaps = 2/201 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ +G+ IPVTV+ ++ VV RT DK+GY AV +G GE K K Sbjct: 1 MPKGIIGKKIGMTRVFK-DGKAIPVTVIQVEPNYVVNIRTEDKDGYSAVVLGTGEKKEKR 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 KPM F + P + L EF +++ + P V F G LVDVTG + G+GF Sbjct: 60 TPKPMLAIFKKAGLKPLRHLAEFPLKEGEQPEPGQEVKVEDVFEKGDLVDVTGTSKGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 + AMKR +F G + +HG S HR+ GS G DPGRV+K K+MAG G +TV+ LEVV Sbjct: 120 ASAMKRWDFSGFKKSHG-SRYHRAVGSIGACSDPGRVWKTKRMAGHYGNETITVQGLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKN 201 + ++ +ILVKG VPGA K+ Sbjct: 179 DIIPEKNIILVKGSVPGAPKS 199 >gi|288925715|ref|ZP_06419647.1| 50S ribosomal protein L3 [Prevotella buccae D17] gi|315606504|ref|ZP_07881519.1| 50S ribosomal protein L3 [Prevotella buccae ATCC 33574] gi|288337653|gb|EFC76007.1| 50S ribosomal protein L3 [Prevotella buccae D17] gi|315251910|gb|EFU31884.1| 50S ribosomal protein L3 [Prevotella buccae ATCC 33574] Length = 204 Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 86/205 (41%), Positives = 129/205 (62%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G GEAK K SK Sbjct: 3 GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F +PKK L EF+ ++ +L G + F + VDV G++ GKGF G Sbjct: 63 PQLGHFKKAGTTPKKHLAEFKFDEEYNL---GDTINVELFNDTKFVDVVGISKGKGFQGV 119 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGG+ ++THG R GS G P +VFK +MAG+MGG+RVT +NL+V+ V Sbjct: 120 MKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLQVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 ++ L++VKG + G K ++ ++ + Sbjct: 180 IPEQNLLIVKGSIAGCKGSTVLIEK 204 >gi|288942072|ref|YP_003444312.1| 50S ribosomal protein L3 [Allochromatium vinosum DSM 180] gi|288897444|gb|ADC63280.1| 50S ribosomal protein L3 [Allochromatium vinosum DSM 180] Length = 216 Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 90/198 (45%), Positives = 123/198 (62%), Gaps = 1/198 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GV+ RK GMT V+ G IPVTV+ + +V ++ + +GY A+QV G+ + Sbjct: 1 MSIGVIGRKAGMTRVFTEAGESIPVTVIEVTPNRVSQVKSEETDGYRAIQVAFGQRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KPM G ++ V + L EFR++ + L VG S S F GQ VDV G+T G+G Sbjct: 61 VTKPMAGHYAKAGVEAGEVLREFRLEGGEGADLQVGQEISVSIFEPGQKVDVRGVTKGRG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG ++RH+F G THG S+SHR+ GS G Q PGRV+K KKMAG +G +NLEV Sbjct: 121 FSGVIRRHHFAGQDRTHGNSLSHRAPGSIGQNQTPGRVWKGKKMAGHLGAANRCQQNLEV 180 Query: 180 VSVDDKRGLILVKGCVPG 197 V +D +R L+LV+G VPG Sbjct: 181 VRIDAERNLLLVRGGVPG 198 >gi|254822787|ref|ZP_05227788.1| 50S ribosomal protein L3 [Mycobacterium intracellulare ATCC 13950] Length = 217 Score = 164 bits (415), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 92/212 (43%), Positives = 127/212 (59%), Gaps = 3/212 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ R +PVTV+ V RT +++GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDENNRIVPVTVVKAGPNVVTRIRTPEQDGYSAVQLAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP+ G +++ V+P++ L E R+ D VG + FT G VDVTG + GKG Sbjct: 63 NKPVTGQYAAAGVNPRRFLAELRLDNPDAAAEYQVGQELTAEIFTDGSYVDVTGTSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV+NL V Sbjct: 123 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + G++L+KG VPG + ++VR + K Sbjct: 183 HKVDTENGVLLIKGAVPG-RTGGLVVVRSAVK 213 >gi|183981053|ref|YP_001849344.1| 50S ribosomal protein L3 RplC [Mycobacterium marinum M] gi|226730539|sp|B2HSN1|RL3_MYCMM RecName: Full=50S ribosomal protein L3 gi|183174379|gb|ACC39489.1| 50S ribosomal protein L3 RplC [Mycobacterium marinum M] Length = 217 Score = 164 bits (415), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 128/212 (60%), Gaps = 3/212 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ + +PVTV+ V RT +++GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP+ G +++ V+P++ L E R+ + + VG + F G VDVTG + GKG Sbjct: 63 NKPVTGQYTAAGVNPRRHLAELRLDDAEAVTEYEVGQELTAEIFADGSYVDVTGTSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV+NL V Sbjct: 123 FAGTMKRHGFSGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD ++G++L+KG VPG + ++VR + K Sbjct: 183 HKVDAEQGVLLIKGAVPG-RTGGLVMVRSAIK 213 >gi|88608492|ref|YP_506157.1| ribosomal protein L3 [Neorickettsia sennetsu str. Miyayama] gi|88600661|gb|ABD46129.1| ribosomal protein L3 [Neorickettsia sennetsu str. Miyayama] Length = 210 Score = 164 bits (415), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 96/210 (45%), Positives = 134/210 (63%), Gaps = 7/210 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ +K+G T VY+ +P+T+L L+ + VV +++G + +V G K+K Sbjct: 3 RVGLLLKKVGCTSVYDDRFSLVPITLLQLE--ENVVLSAEERDGVVIARVSFGTRKLK-- 58 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +P + + ++ EFRV P+GS+ + +F GQ VD G +IGKGF+ Sbjct: 59 -RPQSACLKKLGLEKGGRVVEFRVSPRFMPEPLGSL-TVEHFRPGQYVDAVGTSIGKGFA 116 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF GLRA+HGVSISHRS GSTG QDPG+VFK KKMAG MG RVT++NL V Sbjct: 117 GVMKRHNFAGLRASHGVSISHRSGGSTGQCQDPGKVFKGKKMAGHMGNARVTIQNLLVQL 176 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + LI V+G VPG KNS++L++D+ K Sbjct: 177 VDVENCLIGVRGSVPGC-KNSYVLLKDALK 205 >gi|54022700|ref|YP_116942.1| 50S ribosomal protein L3 [Nocardia farcinica IFM 10152] gi|81823259|sp|Q5Z1W3|RL3_NOCFA RecName: Full=50S ribosomal protein L3 gi|54014208|dbj|BAD55578.1| putative ribosomal protein L3 [Nocardia farcinica IFM 10152] Length = 221 Score = 164 bits (415), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 90/214 (42%), Positives = 127/214 (59%), Gaps = 2/214 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 +G++ KLGMT V++ + R +PVTV+ V RT +++GY AVQV G + V+ Sbjct: 10 AGILGTKLGMTQVFDEKNRVVPVTVIKAGPNVVTQIRTEERDGYSAVQVAFGAIDPRKVN 69 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ V+P++ + E RV D VG + F G VDVTG + GKG++G Sbjct: 70 KPVAGQFAKAGVTPRRHIAEIRVA-DASSFEVGQEINADVFEEGSYVDVTGTSKGKGYAG 128 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G A+HG HR GS G PGRVFK +MAGRMG +RVT +NL V V Sbjct: 129 TMKRHGFRGQGASHGAQAVHRRPGSIGGCATPGRVFKGMRMAGRMGNDRVTTQNLSVHKV 188 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D + GL+L+KG +PG +K ++V+ + K + Sbjct: 189 DAENGLLLIKGAIPG-RKGGVVIVKSAVKGGAHA 221 >gi|330470173|ref|YP_004407916.1| 50S ribosomal protein L3 [Verrucosispora maris AB-18-032] gi|328813144|gb|AEB47316.1| 50S ribosomal protein L3 [Verrucosispora maris AB-18-032] Length = 207 Score = 164 bits (415), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 88/201 (43%), Positives = 122/201 (60%), Gaps = 3/201 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V++ + +PVTV+ C + R DK+GY AVQ+ G + KP+RG ++ Sbjct: 1 MTQVWD-NNKVVPVTVVQAGPCVISQVRDADKDGYSAVQLAYGTIDPRKAKKPLRGHYAK 59 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 +V+P++ + E R D +G + F G +DVTG T GKG++G MKRH F G Sbjct: 60 ADVAPRRHIVELRTSDAADY-SLGQEITVEEFPAGISIDVTGKTKGKGYAGPMKRHGFHG 118 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 LRA+HGV HRS GS G PGRVFK +MAGRMGG R TV+NL V +VD + L+LV Sbjct: 119 LRASHGVERKHRSPGSIGACATPGRVFKGTRMAGRMGGVRYTVQNLTVQAVDTENNLLLV 178 Query: 192 KGCVPGAKKNSWILVRDSFKS 212 +G +PG K + +LVR + K+ Sbjct: 179 RGAIPGP-KGALVLVRTAAKT 198 >gi|194335445|ref|YP_002017239.1| ribosomal protein L3 [Pelodictyon phaeoclathratiforme BU-1] gi|226730543|sp|B4SBU7|RL3_PELPB RecName: Full=50S ribosomal protein L3 gi|194307922|gb|ACF42622.1| ribosomal protein L3 [Pelodictyon phaeoclathratiforme BU-1] Length = 209 Score = 164 bits (415), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 86/202 (42%), Positives = 125/202 (61%), Gaps = 1/202 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT ++N + + T++ C V + DK GY A Q+G GE K K VSKP Sbjct: 4 ILGKKIGMTRLFNEKREAVSCTIIQAGPCFVTQVKRADKEGYDAYQIGIGERKEKKVSKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 ++G + V+P KL EF ++ + L +GS S FT G+ V+V G++ GKGF+G M Sbjct: 64 LQGHYKKAGVAPGFKLAEFDFKELNQELELGSAVSVESFTEGEKVNVLGVSKGKGFAGVM 123 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHNF G + THG S R+ GS G DP RVFK +MAGRMG + +TV+NL + + Sbjct: 124 KRHNFSGGQRTHGQSDRQRAPGSVGGSSDPSRVFKGTRMAGRMGSDNITVRNLVIFKIMP 183 Query: 185 KRGLILVKGCVPGAKKNSWILV 206 + LI++KG VPG KNS++ + Sbjct: 184 ESNLIVIKGSVPGP-KNSYVKI 204 >gi|237806875|ref|YP_002891315.1| 50S ribosomal protein L3 [Tolumonas auensis DSM 9187] gi|259709745|sp|C4L7T0|RL3_TOLAT RecName: Full=50S ribosomal protein L3 gi|237499136|gb|ACQ91729.1| ribosomal protein L3 [Tolumonas auensis DSM 9187] Length = 212 Score = 164 bits (415), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 95/213 (44%), Positives = 131/213 (61%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RKLGMT V+ +G IPVTV+ ++ +V +TL+ +GY AVQV G K Sbjct: 1 MTLGLVGRKLGMTRVFTEDGVSIPVTVIEVEANRVTQLKTLETDGYTAVQVTTGVKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++K G F+ V + L+EFR+ + L VGS F + DVTG++ GKG Sbjct: 61 LTKAEAGHFAKAEVEAGRGLWEFRLNDGEGADLTVGSELKVDIFADVKKADVTGISKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KR NF THG S SHR GS G Q PG+VFK KKMAG +G RVTV++L++ Sbjct: 121 FAGVVKRWNFRTQDMTHGNSRSHRVPGSIGQNQSPGKVFKGKKMAGHLGCERVTVQSLDI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+L+KG VPGA N ++V+ + K+ Sbjct: 181 VRVDVERNLLLIKGAVPGA-TNGDVIVKPAVKA 212 >gi|237743899|ref|ZP_04574380.1| LSU ribosomal protein L3P [Fusobacterium sp. 7_1] gi|229432930|gb|EEO43142.1| LSU ribosomal protein L3P [Fusobacterium sp. 7_1] Length = 211 Score = 164 bits (415), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT ++ +G+ IPVTV+ V+ +T +K+GY+A+Q+G E K KN + Sbjct: 2 SGILGKKIGMTQIFE-DGKFIPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ V P++ + E V+ D +G VD+TG + GKG SG Sbjct: 61 KPLMGIFNKAGVKPQRFVKELAVESVDGY-ELGQEIKVDVLAEVGYVDITGTSKGKGTSG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGG RA+HGVS +HR GS G PG+V K K+MAG+ G VTV+NL+VV V Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D + L+L+KG VPGA KNS+++++ + K + Sbjct: 180 DAEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210 >gi|304384275|ref|ZP_07366686.1| 50S ribosomal protein L3 [Prevotella marshii DSM 16973] gi|304334591|gb|EFM00873.1| 50S ribosomal protein L3 [Prevotella marshii DSM 16973] Length = 204 Score = 164 bits (415), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 89/205 (43%), Positives = 126/205 (61%), Gaps = 5/205 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V++ +G+ +P TV+ C V +TL+K+GY AVQ+G EAK +K Sbjct: 3 GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTLEKDGYKAVQLGFAEAKESRTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 PM G F +PKK L EF+ +++ +L G + F + VDV G + GKGF G Sbjct: 63 PMLGIFKKAGTTPKKHLVEFKFEEEYNL---GDTITVELFNDTEFVDVVGTSKGKGFQGV 119 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ ++THG R GS G P +VFK +MAG+MGG+RVT +NL V+ V Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLRVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + LILVKG V G K S +L++ Sbjct: 180 IPEHNLILVKGSVAGC-KGSTVLIK 203 >gi|308376477|ref|ZP_07438983.2| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu008] gi|308350981|gb|EFP39832.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu008] Length = 221 Score = 164 bits (414), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 125/212 (58%), Gaps = 3/212 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ R +PVTV+ V RT +++GY AVQ+ GE + V Sbjct: 7 RKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP--VGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP+ G +++ V+P++ L E R+ D VG + F G VDVTG + GKG Sbjct: 67 NKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKG 126 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV NL V Sbjct: 127 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLV 186 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + G++L+KG VPG + ++VR + K Sbjct: 187 HKVDAENGVLLIKGAVPG-RTGGLVMVRSAIK 217 >gi|15607841|ref|NP_215215.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis H37Rv] gi|15840108|ref|NP_335145.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis CDC1551] gi|31791886|ref|NP_854379.1| 50S ribosomal protein L3 [Mycobacterium bovis AF2122/97] gi|121636623|ref|YP_976846.1| 50S ribosomal protein L3 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660476|ref|YP_001281999.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis H37Ra] gi|148821906|ref|YP_001286660.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis F11] gi|167967943|ref|ZP_02550220.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis H37Ra] gi|215402485|ref|ZP_03414666.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis 02_1987] gi|215410256|ref|ZP_03419064.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis 94_M4241A] gi|215425943|ref|ZP_03423862.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis T92] gi|215429541|ref|ZP_03427460.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis EAS054] gi|215444824|ref|ZP_03431576.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis T85] gi|218752351|ref|ZP_03531147.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis GM 1503] gi|219556550|ref|ZP_03535626.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis T17] gi|224989095|ref|YP_002643782.1| 50S ribosomal protein L3 [Mycobacterium bovis BCG str. Tokyo 172] gi|253797644|ref|YP_003030645.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis KZN 1435] gi|254231021|ref|ZP_04924348.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis C] gi|254363648|ref|ZP_04979694.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis str. Haarlem] gi|254549662|ref|ZP_05140109.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185583|ref|ZP_05763057.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis CPHL_A] gi|260199711|ref|ZP_05767202.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis T46] gi|260203872|ref|ZP_05771363.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis K85] gi|289442102|ref|ZP_06431846.1| LSU ribosomal protein L3 [Mycobacterium tuberculosis T46] gi|289446261|ref|ZP_06436005.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis CPHL_A] gi|289552958|ref|ZP_06442168.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis KZN 605] gi|289568645|ref|ZP_06448872.1| ribosomal protein L3 [Mycobacterium tuberculosis T17] gi|289573309|ref|ZP_06453536.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis K85] gi|289744425|ref|ZP_06503803.1| ribosomal protein L3 [Mycobacterium tuberculosis 02_1987] gi|289749208|ref|ZP_06508586.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis T92] gi|289752748|ref|ZP_06512126.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis EAS054] gi|289756789|ref|ZP_06516167.1| ribosomal protein L3 [Mycobacterium tuberculosis T85] gi|289760828|ref|ZP_06520206.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis GM 1503] gi|294996196|ref|ZP_06801887.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis 210] gi|297633200|ref|ZP_06950980.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis KZN 4207] gi|297730180|ref|ZP_06959298.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis KZN R506] gi|298524192|ref|ZP_07011601.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis 94_M4241A] gi|306774812|ref|ZP_07413149.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu001] gi|306781456|ref|ZP_07419793.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu002] gi|306783353|ref|ZP_07421675.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu003] gi|306787722|ref|ZP_07426044.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu004] gi|306794489|ref|ZP_07432791.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu005] gi|306796455|ref|ZP_07434757.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu006] gi|306806525|ref|ZP_07443193.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu007] gi|306966722|ref|ZP_07479383.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu009] gi|306970914|ref|ZP_07483575.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu010] gi|307078644|ref|ZP_07487814.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu011] gi|307083208|ref|ZP_07492321.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu012] gi|313657507|ref|ZP_07814387.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis KZN V2475] gi|42560219|sp|P60441|RL3_MYCBO RecName: Full=50S ribosomal protein L3 gi|42560220|sp|P60442|RL3_MYCTU RecName: Full=50S ribosomal protein L3 gi|166233162|sp|A1KGI2|RL3_MYCBP RecName: Full=50S ribosomal protein L3 gi|166233166|sp|A5U087|RL3_MYCTA RecName: Full=50S ribosomal protein L3 gi|254803684|sp|C1AL35|RL3_MYCBT RecName: Full=50S ribosomal protein L3 gi|1806169|emb|CAB06464.1| PROBABLE 50S RIBOSOMAL PROTEIN L3 RPLC [Mycobacterium tuberculosis H37Rv] gi|13880258|gb|AAK44959.1| ribosomal protein L3 [Mycobacterium tuberculosis CDC1551] gi|31617473|emb|CAD93583.1| PROBABLE 50S RIBOSOMAL PROTEIN L3 RPLC [Mycobacterium bovis AF2122/97] gi|121492270|emb|CAL70737.1| Probable 50S ribosomal protein L3 rplC [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600080|gb|EAY59090.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis C] gi|134149162|gb|EBA41207.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis str. Haarlem] gi|148504628|gb|ABQ72437.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis H37Ra] gi|148720433|gb|ABR05058.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis F11] gi|224772208|dbj|BAH25014.1| 50S ribosomal protein L3 [Mycobacterium bovis BCG str. Tokyo 172] gi|253319147|gb|ACT23750.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis KZN 1435] gi|289415021|gb|EFD12261.1| LSU ribosomal protein L3 [Mycobacterium tuberculosis T46] gi|289419219|gb|EFD16420.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis CPHL_A] gi|289437590|gb|EFD20083.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis KZN 605] gi|289537740|gb|EFD42318.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis K85] gi|289542399|gb|EFD46047.1| ribosomal protein L3 [Mycobacterium tuberculosis T17] gi|289684953|gb|EFD52441.1| ribosomal protein L3 [Mycobacterium tuberculosis 02_1987] gi|289689795|gb|EFD57224.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis T92] gi|289693335|gb|EFD60764.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis EAS054] gi|289708334|gb|EFD72350.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis GM 1503] gi|289712353|gb|EFD76365.1| ribosomal protein L3 [Mycobacterium tuberculosis T85] gi|298493986|gb|EFI29280.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis 94_M4241A] gi|308216702|gb|EFO76101.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu001] gi|308325756|gb|EFP14607.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu002] gi|308331847|gb|EFP20698.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu003] gi|308335634|gb|EFP24485.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu004] gi|308337249|gb|EFP26100.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu005] gi|308343115|gb|EFP31966.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu006] gi|308347002|gb|EFP35853.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu007] gi|308355577|gb|EFP44428.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu009] gi|308359535|gb|EFP48386.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu010] gi|308363440|gb|EFP52291.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu011] gi|308367078|gb|EFP55929.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu012] gi|323720925|gb|EGB29991.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis CDC1551A] gi|326905077|gb|EGE52010.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis W-148] gi|328457425|gb|AEB02848.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis KZN 4207] Length = 217 Score = 164 bits (414), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 125/212 (58%), Gaps = 3/212 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ R +PVTV+ V RT +++GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP--VGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP+ G +++ V+P++ L E R+ D VG + F G VDVTG + GKG Sbjct: 63 NKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV NL V Sbjct: 123 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLV 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + G++L+KG VPG + ++VR + K Sbjct: 183 HKVDAENGVLLIKGAVPG-RTGGLVMVRSAIK 213 >gi|295101414|emb|CBK98959.1| LSU ribosomal protein L3P [Faecalibacterium prausnitzii L2-6] Length = 210 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 126/212 (59%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT +++ G+ IPVTV+ C VV +T++ +GY AVQ+G GE K Sbjct: 1 MVKGIIGKKVGMTQLFDESGKVIPVTVIEAGPCTVVQKKTVESDGYQAVQLGFGEVSAKK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F NV+PKK L EFR++ D + VG V F G VDV G++ GKG+ Sbjct: 61 VNKAAAGHFKKANVAPKKTLREFRLE-DVSAMNVGDVLKADVFAAGDKVDVVGVSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR+ LR +HG R GS G P RVF K++ G MG RVTV+NL VV Sbjct: 120 QGVIKRYGQHRLRESHGTGPVARHAGSNGSTSTPSRVFPGKRLPGHMGFVRVTVQNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + LI VKG VPG+ K + + + +S K+ Sbjct: 180 KVDTENNLIAVKGAVPGS-KGTIVTLANSVKA 210 >gi|118602213|ref|YP_903428.1| 50S ribosomal protein L3P [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|226730558|sp|A1AVK0|RL3_RUTMC RecName: Full=50S ribosomal protein L3 gi|118567152|gb|ABL01957.1| LSU ribosomal protein L3P [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 238 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 94/222 (42%), Positives = 135/222 (60%), Gaps = 9/222 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG------ 54 M G+V +K+GMT + + +G PV+V+ ++ ++V +T+D NGY A+QV G Sbjct: 1 MAMGLVGQKIGMTRLISDDGSITPVSVIKIELNRIVQTKTVDTNGYSAIQVTTGVKVNKK 60 Query: 55 -EAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113 EAKV V ++G ++ + L+EFRV+ D+ + + S F+ G V+V G Sbjct: 61 GEAKVHRVPAAIKGHYAKTSQEIGLGLWEFRVEADE--ITDATSVDISLFSAGHYVNVVG 118 Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 + GKGF G +KRHNF ATHG SISHR+ GSTG Q+PGRVFK KKMAG MG +VT Sbjct: 119 RSKGKGFQGGVKRHNFQMQDATHGNSISHRAIGSTGQCQEPGRVFKGKKMAGHMGNEQVT 178 Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 + L++V VD +R +I VKG +PGA K + S K+ +N Sbjct: 179 QECLKIVKVDSERNIIFVKGSIPGATKGFVKISLSSKKNKIN 220 >gi|296329220|ref|ZP_06871721.1| 50S ribosomal protein L3 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296153576|gb|EFG94393.1| 50S ribosomal protein L3 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 211 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT ++ +G+ +PVTV+ V+ +T +K+GY+A+Q+G E K KN + Sbjct: 2 SGILGKKIGMTQIFE-DGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ V P++ + E V+ D +G T VD+TG + GKG SG Sbjct: 61 KPLMGIFNKAGVKPQRFVKELEVESVDGY-ELGQEIKVDVLTEVGYVDITGTSKGKGTSG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MK+H F G RA+HGVS +HR GS G PG+V K KKMAG+ G VTV+NL+VV V Sbjct: 120 VMKKHGFAGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKKMAGQHGNATVTVQNLKVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D + L+L+KG VPGA KNS+++++ + K + Sbjct: 180 DAEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210 >gi|258513640|ref|YP_003189862.1| 50S ribosomal protein L3 [Desulfotomaculum acetoxidans DSM 771] gi|257777345|gb|ACV61239.1| ribosomal protein L3 [Desulfotomaculum acetoxidans DSM 771] Length = 209 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 131/212 (61%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ +GR +PVTV+ C VV +T +++GY AVQ+G GE + + Sbjct: 1 MPKGILGKKVGMTQIFTEDGRALPVTVIEAGPCVVVQKKTPEQDGYAAVQLGFGEKRERL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP++G F V+P + L E RV+ D D VG F+ G VDV G++ GKGF Sbjct: 61 FNKPLKGHFKKYGVTPMRYLKELRVE-DIDSYEVGQEIKADLFSKGDKVDVVGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNF HG S HR GS G + P RVFK +K+ G MG RVTV+NLE+V Sbjct: 120 AGGIKRHNFHRGPMAHG-SKYHRRPGSLGAK-GPARVFKGRKLPGHMGVERVTVQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R ++ VKG +PG KN +++ S K+ Sbjct: 178 KVDAERNILAVKGAIPG-NKNGLVMILTSKKA 208 >gi|282898357|ref|ZP_06306348.1| Ribosomal protein L3 [Raphidiopsis brookii D9] gi|281196888|gb|EFA71793.1| Ribosomal protein L3 [Raphidiopsis brookii D9] Length = 212 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 88/197 (44%), Positives = 122/197 (61%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT +++ G IPVTV+ C V +T +GY A+QVG GE K K Sbjct: 1 MSVGILGTKLGMTQIFDEAGVSIPVTVIKAGPCTVTQVKTQPTDGYCAIQVGYGEVKPKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G + + P + L E+R D +G F+VGQ+VDV G +IG+GF Sbjct: 61 LNQPKLGHLAKSSAGPVRYLNEYRTDAAGDYA-LGQEIKADIFSVGQIVDVIGTSIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KR+NFG +HG S +HR+ GS G PGRV+ K+MAGR+GG+RVTV+ L VV Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGSRVTVRKLTVV 178 Query: 181 SVDDKRGLILVKGCVPG 197 VD +R LIL+KG +PG Sbjct: 179 KVDAERNLILIKGAIPG 195 >gi|156743948|ref|YP_001434077.1| 50S ribosomal protein L3 [Roseiflexus castenholzii DSM 13941] gi|189029477|sp|A7NR63|RL3_ROSCS RecName: Full=50S ribosomal protein L3 gi|156235276|gb|ABU60059.1| ribosomal protein L3 [Roseiflexus castenholzii DSM 13941] Length = 210 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 94/213 (44%), Positives = 129/213 (60%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V++ G+ IPVT++ + C V RT +++GY AVQ+G E + K+ Sbjct: 1 MIEGLLGRKIGMTQVFDPTGQVIPVTIIEVGPCVVTQIRTKERDGYEAVQIGYQEVRAKS 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + L EFR D VG V + F GQ VDV G + G+GF Sbjct: 61 LTKPEQGHLRGAG-KLLRHLREFRTDNIADH-KVGDVLTVEMFAPGQRVDVIGTSKGRGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH FGG THG S R+ GS G DPG ++KN +MAGRMG RVTV+NL VV Sbjct: 119 QGVVKRHGFGGGPRTHGQSDRLRAPGSIGAGTDPGHLWKNTRMAGRMGNQRVTVQNLTVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V +R L+LV+G VPGA N ++VR + K + Sbjct: 179 DVVPERNLLLVRGSVPGA-NNGLVMVRRAIKGS 210 >gi|237755896|ref|ZP_04584489.1| 50S ribosomal protein L3 [Sulfurihydrogenibium yellowstonense SS-5] gi|237691946|gb|EEP60961.1| 50S ribosomal protein L3 [Sulfurihydrogenibium yellowstonense SS-5] Length = 226 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 92/210 (43%), Positives = 129/210 (61%), Gaps = 5/210 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ + G+ IPVTV+ C VV RT +K+GY AV + GE K KN Sbjct: 1 MPKGIIGKKIGMTRVF-VNGKAIPVTVIQAGPCNVVYTRTQEKDGYNAVALAFGERKEKN 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG-SVFSPSYFTVGQLVDVTGMTIGKG 119 KP+ F N+ P K + EF + KD + + +G + + F G LVD+TG + G+G Sbjct: 60 TPKPLLAIFKKANIKPAKVIKEFPL-KDGETVELGQEIRIENVFEKGDLVDITGKSKGRG 118 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+ MKR +F G +HG HR+ GS GCR +PGRV+K K+MAG G VTV LEV Sbjct: 119 FTSVMKRWDFAGFPKSHGHRY-HRAVGSIGCRTEPGRVWKTKRMAGHYGNETVTVLGLEV 177 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 V + ++ +ILVKG VPGA NS + ++ S Sbjct: 178 VDIIPEKNVILVKGSVPGA-PNSIVFLKQS 206 >gi|313112880|ref|ZP_07798526.1| 50S ribosomal protein L3 [Faecalibacterium cf. prausnitzii KLE1255] gi|310624785|gb|EFQ08094.1| 50S ribosomal protein L3 [Faecalibacterium cf. prausnitzii KLE1255] Length = 210 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 126/212 (59%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT +++ G+ +PVTV+ C VV +T++ +GY AVQ+G GE K Sbjct: 1 MVKGIIGKKVGMTQLFDANGKVVPVTVIEAGPCTVVQKKTVESDGYQAVQLGFGEVSAKK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F NV+PKK L EFR++ D + VG V F G VDV G++ GKG+ Sbjct: 61 VNKAAAGHFKKANVAPKKTLREFRLE-DVSAMNVGDVLKADVFAEGDKVDVVGVSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR+ LR +HG R GS G P RVF K++ G MG RVTV+NL VV Sbjct: 120 QGVIKRYGQHRLRESHGTGPVARHAGSNGSTSTPARVFPGKRLPGHMGFVRVTVQNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + LI VKG VPG+ K + I + +S K+ Sbjct: 180 KVDTENNLIAVKGAVPGS-KGTIITLANSVKA 210 >gi|219666490|ref|YP_002456925.1| 50S ribosomal protein L3 [Desulfitobacterium hafniense DCB-2] gi|219536750|gb|ACL18489.1| ribosomal protein L3 [Desulfitobacterium hafniense DCB-2] Length = 209 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 92/205 (44%), Positives = 124/205 (60%), Gaps = 3/205 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ EG IPVTV+ C V+ +T +GY A+QVG G + + Sbjct: 1 MSKGILGKKVGMTQVFTEEGHLIPVTVVEAGPCYVIQKKTKATDGYNAIQVGFGALRERL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +V P + + EFRV D D +G + F G VDV G++ GKGF Sbjct: 61 ANKPQKGHVAKASVKPMRYIREFRVD-DVDAYEIGQEITAEVFAAGDAVDVVGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH G HG S HR GS G + P RVFK + + GRMGG RVTV+NL+VV Sbjct: 120 AGMIKRHGAGRGPMKHG-SKYHRRTGSLGAK-GPARVFKGRNLPGRMGGERVTVQNLKVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWIL 205 VD + +ILVKG VPGAKK+ IL Sbjct: 178 RVDADKNMILVKGAVPGAKKSLLIL 202 >gi|15612697|ref|NP_241000.1| 50S ribosomal protein L3 [Bacillus halodurans C-125] gi|7674305|sp|Q9Z9L4|RL3_BACHD RecName: Full=50S ribosomal protein L3 gi|4512404|dbj|BAA75271.1| rplC homologue (identity of 81% to B. subtilis ) [Bacillus halodurans] gi|10172746|dbj|BAB03853.1| 50S ribosomal protein L3 [Bacillus halodurans C-125] Length = 209 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 96/212 (45%), Positives = 130/212 (61%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ G IPVTV+ V+ +T+D +GY AVQ+G + K N Sbjct: 1 MSKGILGKKVGMTQVFAENGDVIPVTVIEAAPNVVLQKKTVDSDGYEAVQLGFDDQKQNN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +PK+ + E R D+ VG F G +VDVTG + GKGF Sbjct: 61 ANKPEKGHAAKAETAPKRFIKEIRGVNLDEF-EVGQEIKVDAFAEGDIVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GA+KRHN +HG S HR GS G DP RVFK K + GRMGG +VTV+NLE++ Sbjct: 120 AGAIKRHNQARGPMSHG-SRYHRRPGSMGP-VDPNRVFKGKALPGRMGGEQVTVQNLEII 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGAKK S++ VR + KS Sbjct: 178 KVDAERNLLLVKGNVPGAKK-SYVTVRSAIKS 208 >gi|332041523|gb|EGI77883.1| 50S ribosomal protein L3 [Hylemonella gracilis ATCC 19624] Length = 224 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 90/217 (41%), Positives = 128/217 (58%), Gaps = 13/217 (5%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ RK+GM ++ +G +PVTV+ + + +V +T D +GY+A+QV G + V Sbjct: 6 RLGLLGRKVGMMRLFTDDGDAVPVTVVDVSDNRVTQVKTQDNDGYVALQVTFGSRRASRV 65 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-------LPVGSVFSPSYFTVGQLVDVTGM 114 +KP G + V + + EFRV D LPV +F+ VGQ VDV G Sbjct: 66 TKPQAGHLAKAGVEAGEIIQEFRVAADTAAKYQAGAKLPVTEIFA-----VGQKVDVQGT 120 Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 +IGKGF+G +KRHNF RA+HG S SH GS QDPGRVF K+M G MG VT Sbjct: 121 SIGKGFAGTIKRHNFSSQRASHGNSRSHNVPGSISMAQDPGRVFPGKRMTGHMGDETVTT 180 Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +NL+V+ +D+ R L+L+KG VPG+ ++ VR + K Sbjct: 181 QNLDVIRIDEARQLLLIKGAVPGS-AGGFVTVRPAVK 216 >gi|227549826|ref|ZP_03979875.1| 50S ribosomal protein L3 [Corynebacterium lipophiloflavum DSM 44291] gi|227078081|gb|EEI16044.1| 50S ribosomal protein L3 [Corynebacterium lipophiloflavum DSM 44291] Length = 218 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 87/213 (40%), Positives = 122/213 (57%), Gaps = 2/213 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT +++ + R IPVTV+ V RT + +GY A+Q+ G+ + K Sbjct: 8 GILGTKLGMTQIFDEDNRVIPVTVVEAGPVVVTQIRTAETDGYSAIQIAYGDIDPRKTKK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ + E R+ D VG F+ + F VDV G T GKG++GA Sbjct: 68 PQAGHFKKAGVNPRRHVAEIRMD-DTSAYEVGQEFNATIFDGDTYVDVVGTTKGKGYAGA 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G A+HG +HR GS G PGRVFK +MAGRMG NRVT +NL++ +D Sbjct: 127 MKRHGFAGQGASHGNQAAHRRVGSIGACATPGRVFKGTRMAGRMGSNRVTTQNLKIQRID 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 LIL+KG +PG K S + V+ + K + Sbjct: 187 GDNNLILIKGAIPGV-KGSIVTVKTAVKGGAHA 218 >gi|188575490|ref|YP_001912419.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzae PXO99A] gi|188519942|gb|ACD57887.1| ribosomal protein L3 [Xanthomonas oryzae pv. oryzae PXO99A] Length = 207 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 92/209 (44%), Positives = 128/209 (61%), Gaps = 4/209 (1%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + RK GM+ ++ +GR +PVT++ ++ +T++ +GY AVQ+ G + V+KP Sbjct: 1 MGRKAGMSRIFTEDGRSVPVTLIEATPNRIAQIKTVEVDGYSAVQITVGARRAALVNKPA 60 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 G F+ V + L+EFRV+ D L VG F VGQ VDV G+T GKGF G Sbjct: 61 AGHFAKAKVEAGRGLWEFRVE-DAHLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQGT 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR+NF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + + +NLEVV VD Sbjct: 120 IKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVKVD 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +RGLI + G VPGA ++VR + K+ Sbjct: 180 VERGLIAIHGAVPGAAGGD-VIVRPASKA 207 >gi|227497181|ref|ZP_03927429.1| ribosomal protein L3 [Actinomyces urogenitalis DSM 15434] gi|226833312|gb|EEH65695.1| ribosomal protein L3 [Actinomyces urogenitalis DSM 15434] Length = 222 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 88/205 (42%), Positives = 124/205 (60%), Gaps = 2/205 (0%) Query: 9 KLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGF 68 KLGMT +++ G PVTV+ +D V RT++ +GY AVQ+ GE + V+KP+ G Sbjct: 20 KLGMTQIWDENGVLRPVTVVRVDTNVVTQVRTIETDGYEAVQLAFGEIAERKVTKPLAGH 79 Query: 69 FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128 F+ V+P++ + E R + G + F VGQ VDV G + GKGF+G MKRH Sbjct: 80 FAKAGVAPRRHVAEVRTSLASEF-EAGQELTADLFEVGQKVDVQGTSKGKGFAGVMKRHG 138 Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188 F G+ A+HG +HR GS G PGR+FK +MAGRMG TV+NL+V VD ++G+ Sbjct: 139 FAGVSASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGHETTTVQNLKVRGVDVEKGV 198 Query: 189 ILVKGCVPGAKKNSWILVRDSFKSA 213 +LV G +PG K S ++VR + K A Sbjct: 199 LLVNGAIPG-PKGSVVVVRTAVKGA 222 >gi|251772490|gb|EES53056.1| Ribosomal protein L3 [Leptospirillum ferrodiazotrophum] Length = 204 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 88/204 (43%), Positives = 125/204 (61%), Gaps = 3/204 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ K+GMT +Y G+ IPVTV+ + C+V+ +T +K+ Y AVQ+G G K +++KP Sbjct: 4 IIGEKIGMTQIYLPNGKSIPVTVVKVGPCEVIQVKTKEKDRYSAVQLGYGIVKPVSLNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +RG F + + + + E + D P GS++ +F G+LV TGMT GKGF+G M Sbjct: 64 LRGHFQKYSQNTYRTIREVVILGDPP--PSGSIYGADFFKPGELVSATGMTKGKGFAGVM 121 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH+F G ATHG S+ HR GS G P RV KNKK+ G MG +VT+KNLEVV V Sbjct: 122 KRHHFRGGDATHG-SMFHREPGSIGSSAYPSRVLKNKKLPGHMGHKKVTIKNLEVVEVKA 180 Query: 185 KRGLILVKGCVPGAKKNSWILVRD 208 + L+L+KG VPG + +D Sbjct: 181 EANLVLLKGAVPGHPGTILVFKKD 204 >gi|312140918|ref|YP_004008254.1| 50S ribosomal protein l3 rplc [Rhodococcus equi 103S] gi|325675444|ref|ZP_08155128.1| 50S ribosomal protein L3 [Rhodococcus equi ATCC 33707] gi|311890257|emb|CBH49575.1| 50S ribosomal protein L3 RplC [Rhodococcus equi 103S] gi|325553415|gb|EGD23093.1| 50S ribosomal protein L3 [Rhodococcus equi ATCC 33707] Length = 217 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 88/213 (41%), Positives = 124/213 (58%), Gaps = 2/213 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ V RT +++GY AVQ+ G + V+K Sbjct: 7 GILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQIRTEERDGYSAVQLAFGAIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V+P++ + E RV D VG + F G VDVTG + GKGF+G Sbjct: 67 PTSGQFAKAGVTPRRHVVELRV-ADTSEYEVGQELTAEVFEDGAYVDVTGTSKGKGFAGT 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G A+HG HR GS G PGRVFK +M+GRMG +R+T +NL V VD Sbjct: 126 MKRHGFAGQGASHGAQAVHRRPGSIGGCATPGRVFKGMRMSGRMGSDRITTQNLSVHKVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 + GL+L+KG +PG +K ++V+ + K + Sbjct: 186 AENGLLLIKGAIPG-RKGGLVIVKTAVKGGASA 217 >gi|304315940|ref|YP_003851085.1| 50S ribosomal protein L3 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777442|gb|ADL68001.1| 50S ribosomal protein L3 [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 209 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 94/212 (44%), Positives = 129/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K GMT ++ + IPVTV+ C VV +T + +GY A+QVG G+ K K Sbjct: 1 MKKAILGKKHGMTQIF-VGNEMIPVTVVEAGPCVVVQKKTKENDGYDAIQVGFGDVKEKR 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + KP++G F+ NV KK L EFR+ D VGS F+VG VDV G + GKGF Sbjct: 60 LIKPLKGHFTKANVPFKKYLREFRLD-DISSYEVGSEIKADIFSVGDRVDVIGTSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR+N HG S HR GS G DP R FK K++ G MG RVTV+NLEVV Sbjct: 119 AGVVKRYNANRGPMAHG-SKYHRRPGSMGASSDPSRTFKGKRLPGHMGNERVTVQNLEVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++ L+L+KG VPG + S +++RD+ KS Sbjct: 178 KVDPEKNLLLIKGSVPGI-RGSLLMIRDTVKS 208 >gi|300814637|ref|ZP_07094888.1| 50S ribosomal protein L3 [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511256|gb|EFK38505.1| 50S ribosomal protein L3 [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 209 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 92/209 (44%), Positives = 128/209 (61%), Gaps = 3/209 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RK+GMT +++ +G PV+V+ ++ V +T + +GY A+Q+ AG K V+KP Sbjct: 4 LIGRKIGMTQIFDEKGIVTPVSVIEVEPNIVTQKKTSENDGYSAIQISAGAVKENKVNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +G F VS KK L EF + D D +G F VG+ VDV G + GKG +G + Sbjct: 64 TKGHFDKAGVSYKKYLSEF-LTDDVDSYNLGDEIKVDIFEVGEHVDVIGTSKGKGTAGII 122 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH FG R THG S HR G G PG+VFKN +MAG+MG RVTV+NLE+V +D Sbjct: 123 KRHGFGRGRETHG-SKFHRMPGGMGAASYPGKVFKNHRMAGKMGNERVTVQNLEIVRIDA 181 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + LILVKG +PG KK S + V+++ K A Sbjct: 182 SKNLILVKGAIPGNKK-SKVFVKETVKKA 209 >gi|282882468|ref|ZP_06291089.1| 50S ribosomal protein L3 [Peptoniphilus lacrimalis 315-B] gi|281297610|gb|EFA90085.1| 50S ribosomal protein L3 [Peptoniphilus lacrimalis 315-B] Length = 209 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 92/209 (44%), Positives = 128/209 (61%), Gaps = 3/209 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RK+GMT +++ +G PV+V+ ++ V +T + +GY A+Q+ AG K V+KP Sbjct: 4 LIGRKIGMTQIFDEKGIVTPVSVIEVEPNIVTQKKTPENDGYSAIQISAGAVKENKVNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +G F VS KK L EF + D D +G F VG+ VDV G + GKG +G + Sbjct: 64 TKGHFDKAGVSYKKYLSEF-LTDDVDSYNLGDEIKVDIFEVGEHVDVIGTSKGKGTAGII 122 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH FG R THG S HR G G PG+VFKN +MAG+MG RVTV+NLE+V +D Sbjct: 123 KRHGFGRGRETHG-SKFHRMPGGMGAASYPGKVFKNHRMAGKMGNERVTVQNLEIVRIDA 181 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + LILVKG +PG KK S + V+++ K A Sbjct: 182 SKNLILVKGAIPGNKK-SKVFVKETVKKA 209 >gi|307154842|ref|YP_003890226.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 7822] gi|306985070|gb|ADN16951.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 7822] Length = 212 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 89/202 (44%), Positives = 120/202 (59%), Gaps = 3/202 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT +++ E G IPVTV+H C + +T + +GY ++Q+G GE K K Sbjct: 1 MSVGIIGTKLGMTQIFDKETGIAIPVTVIHAGPCPITQIKTPETDGYSSIQIGYGEVKEK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP+ G P K L E+R+ + +G F G +VDV G TIG+G Sbjct: 61 ALNKPLLGHLKKSESIPLKNLKEYRLDNPEQYQ-LGDALKVDIFQPGDIVDVAGKTIGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G KRHNF THG S +HR GSTG PGRV+ K+MAGR GG +VT++ L V Sbjct: 120 FAGYQKRHNFKRGSMTHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGRYGGTQVTIRKLTV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKN 201 V VD +R LIL+KG VPG N Sbjct: 179 VQVDPERNLILIKGAVPGKPGN 200 >gi|19704966|ref|NP_602461.1| 50S ribosomal protein L3 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|42559658|sp|Q8RIF5|RL3_FUSNN RecName: Full=50S ribosomal protein L3 gi|19712868|gb|AAL93760.1| LSU ribosomal protein L3P [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 211 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT ++ +G+ +PVTV+ V+ +T +K+GY+A+Q+G E K KN + Sbjct: 2 SGILGKKIGMTQIFE-DGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ V P++ + E V+ D +G T VD+TG + GKG SG Sbjct: 61 KPLMGIFNKAGVKPQRFVKELEVESVDGY-ELGQEIKVDVLTEVGYVDITGTSKGKGTSG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MK+H F G RA+HGVS +HR GS G PG+V K KKMAG+ G VTV+NL+VV V Sbjct: 120 VMKKHGFSGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKKMAGQHGNATVTVQNLKVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D + L+L+KG VPGA KNS+++++ + K + Sbjct: 180 DAEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210 >gi|51894210|ref|YP_076901.1| 50S ribosomal protein L3 [Symbiobacterium thermophilum IAM 14863] gi|81826004|sp|Q67JU3|RL3_SYMTH RecName: Full=50S ribosomal protein L3 gi|51857899|dbj|BAD42057.1| 50S ribosomal protein L3 [Symbiobacterium thermophilum IAM 14863] Length = 216 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 98/209 (46%), Positives = 132/209 (63%), Gaps = 4/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +KLGMT ++ +G+ IPVTV+ C VV +T +GY AVQ+G GE + Sbjct: 1 MQKGILGKKLGMTQIFAPDGKIIPVTVVEAGPCVVVQKKTTATDGYNAVQLGFGEIRETL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F V + L EFR+ D + L VG V F G+LVDVTG++ GKGF Sbjct: 61 VNKPLKGHFEKHQVKATRYLREFRLD-DVESLNVGDVIKADIFAEGELVDVTGISRGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF ++HG S HR GS G R+ RV K +K+ GR+GG RVTV L VV Sbjct: 120 AGGVKRWNFNRGPSSHG-SKYHRRPGSLGQRRW-ARVPKGRKLPGRLGGERVTVLGLRVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VD ++ LIL+KG VPGA K S I +RDS Sbjct: 178 KVDPEKNLILIKGAVPGA-KGSLITIRDS 205 >gi|257453271|ref|ZP_05618570.1| 50S ribosomal protein L3P [Fusobacterium sp. 3_1_5R] gi|257467134|ref|ZP_05631445.1| 50S ribosomal protein L3P [Fusobacterium gonidiaformans ATCC 25563] gi|315918265|ref|ZP_07914505.1| LSU ribosomal protein L3P [Fusobacterium gonidiaformans ATCC 25563] gi|317059805|ref|ZP_07924290.1| LSU ribosomal protein L3P [Fusobacterium sp. 3_1_5R] gi|313685481|gb|EFS22316.1| LSU ribosomal protein L3P [Fusobacterium sp. 3_1_5R] gi|313692140|gb|EFS28975.1| LSU ribosomal protein L3P [Fusobacterium gonidiaformans ATCC 25563] Length = 208 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 89/209 (42%), Positives = 133/209 (63%), Gaps = 3/209 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++A+K+GMT ++ +G+ +PVTV+ V+ +T + +GY A+Q+G E K KN + Sbjct: 2 SGILAKKIGMTQIFE-DGKFVPVTVVEAGPNYVLQKKTEESDGYTALQLGFDEKKEKNTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ V P++ + E +V + +G F+ + VD+TG + GKG +G Sbjct: 61 KPLMGIFNKAGVKPQRFVRELKVDSVEGY-ELGQEIKVDVFSEVEYVDITGTSKGKGTAG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGG RATHGVS +HR GS G PG+V K +MAGR G VTV+NL+VV V Sbjct: 120 VMKRHGFGGNRATHGVSRNHRLGGSIGQSSWPGKVLKGLRMAGRHGNATVTVQNLKVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D + L+L+KG VPGA KN +++++ + K Sbjct: 180 DAENNLLLIKGAVPGA-KNGYLVIKPAIK 207 >gi|19551746|ref|NP_599748.1| 50S ribosomal protein L3 [Corynebacterium glutamicum ATCC 13032] gi|62389401|ref|YP_224803.1| 50S ribosomal protein L3 [Corynebacterium glutamicum ATCC 13032] gi|145294657|ref|YP_001137478.1| 50S ribosomal protein L3 [Corynebacterium glutamicum R] gi|42559652|sp|Q8NT09|RL3_CORGL RecName: Full=50S ribosomal protein L3 gi|166233137|sp|A4QBH9|RL3_CORGB RecName: Full=50S ribosomal protein L3 gi|21323271|dbj|BAB97899.1| Ribosomal protein L3 [Corynebacterium glutamicum ATCC 13032] gi|41324735|emb|CAF19217.1| 50S RIBOSOMAL PROTEIN L3 [Corynebacterium glutamicum ATCC 13032] gi|140844577|dbj|BAF53576.1| hypothetical protein [Corynebacterium glutamicum R] Length = 218 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 87/215 (40%), Positives = 127/215 (59%), Gaps = 6/215 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT +++ E R IPVTV+ C V RT++ +GY A+Q+ GE + V++ Sbjct: 8 GILGTKLGMTQIFDEENRVIPVTVVEAGPCVVSQIRTVETDGYNAIQIAYGEIDPRKVNQ 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 P+ G F V+P++ + E R+ DD+ VG + F + VDVTG T GKG++ Sbjct: 68 PLTGHFKKAGVTPRRHVTEIRM---DDVSGYEVGQDVTVEIFNDIKFVDVTGTTKGKGYA 124 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 GAMKRH F G A HG +HR G G PGR+FK K+MAGRMG +RVT +NL+V Sbjct: 125 GAMKRHGFAGQGAGHGNQAAHRRVGGIGAAATPGRIFKGKRMAGRMGNDRVTTQNLKVQK 184 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 +D +IL+KG +PG + + V+ + K + Sbjct: 185 IDADANIILIKGAIPG-NRGGIVTVKTAVKGGAHA 218 >gi|256027490|ref|ZP_05441324.1| 50S ribosomal protein L3P [Fusobacterium sp. D11] gi|260495203|ref|ZP_05815331.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_33] gi|289765452|ref|ZP_06524830.1| LSU ribosomal protein L3P [Fusobacterium sp. D11] gi|260197260|gb|EEW94779.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_33] gi|289717007|gb|EFD81019.1| LSU ribosomal protein L3P [Fusobacterium sp. D11] Length = 211 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT ++ +G+ +PVTV+ V+ +T +K+GY+A+Q+G E K KN + Sbjct: 2 SGILGKKIGMTQIFE-DGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ V P++ + E V+ D +G VD+TG + GKG SG Sbjct: 61 KPLMGIFNKAGVKPQRFVKELAVESVDGY-ELGQEIKVDVLAEVGYVDITGTSKGKGTSG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGG RA+HGVS +HR GS G PG+V K K+MAG+ G VTV+NL+VV V Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D + L+L+KG VPGA KNS+++++ + K + Sbjct: 180 DAEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210 >gi|288801098|ref|ZP_06406554.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 299 str. F0039] gi|288332032|gb|EFC70514.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 299 str. F0039] Length = 204 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 86/205 (41%), Positives = 126/205 (61%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V++ +G+ IP TV+ C V +T++K+GY AVQ+G GEAK N +K Sbjct: 3 GLIGRKIGMTSVFSADGKNIPCTVIEAGPCVVTQVKTIEKDGYKAVQLGFGEAKESNTNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 PM G F +PKK L EF+ ++ +L G + F VDV G + GKGF G Sbjct: 63 PMMGTFKKAGTTPKKHLAEFKFDEEYNL---GDTITVELFNDANFVDVVGTSKGKGFQGV 119 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ ++THG R GS G P +VFK +MAG+MGG+RVT +NL+V+ V Sbjct: 120 IKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLKVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + ++LVKG V G ++ ++ + Sbjct: 180 IPEHNILLVKGSVAGCNGSTLLIEK 204 >gi|164686527|ref|ZP_02210555.1| hypothetical protein CLOBAR_00094 [Clostridium bartlettii DSM 16795] gi|164604396|gb|EDQ97861.1| hypothetical protein CLOBAR_00094 [Clostridium bartlettii DSM 16795] Length = 209 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 93/210 (44%), Positives = 131/210 (62%), Gaps = 4/210 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ G IPVTV+ V +T + +GY A+QVG +AK K+++K Sbjct: 3 GILGKKIGMTQIFTEHGEVIPVTVVEAGPVVVTQIKTTENDGYTAIQVGFQDAKEKSLNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G ++ N + KK L EFRV ++ VG F G+L+DVTG++ GKGF G Sbjct: 63 PQKGHLAAAN-TLKKHLKEFRVDSVEEYT-VGQEIKADLFAAGELIDVTGISKGKGFQGP 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KRH THG S HR GS G PGRVFKNKK+AG MG +VTV+NLEVV VD Sbjct: 121 IKRHGQSRGPETHG-SRYHRRPGSMGACSYPGRVFKNKKLAGHMGSVKVTVQNLEVVRVD 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + ILVKG +PGA K S + ++++ K++ Sbjct: 180 ADKNFILVKGAIPGA-KGSVVTIKEAVKAS 208 >gi|119773354|ref|YP_926094.1| 50S ribosomal protein L3 [Shewanella amazonensis SB2B] gi|166234590|sp|A1S218|RL3_SHEAM RecName: Full=50S ribosomal protein L3 gi|119765854|gb|ABL98424.1| LSU ribosomal protein L3P [Shewanella amazonensis SB2B] Length = 212 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 91/206 (44%), Positives = 124/206 (60%), Gaps = 1/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G IPVTV+ ++ +V +TL+ +GY A+QV G K Sbjct: 1 MAIGLIGRKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKTLENDGYRALQVTTGAKKAHR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV-FSPSYFTVGQLVDVTGMTIGKG 119 V+KP G F+ V + L+E R+ + + + F Q VDVTG + GKG Sbjct: 61 VTKPEAGHFAKAGVEAGRGLWEMRLGEGEGEGIEVGAELNVEIFADVQKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF THG S+SHR++GS G Q PGRVFK KKM+G MG RVT +NL+V Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLSHRANGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205 V VD +R L+LVKG VPGA I+ Sbjct: 181 VRVDVERNLLLVKGAVPGATNGDLII 206 >gi|269925831|ref|YP_003322454.1| ribosomal protein L3 [Thermobaculum terrenum ATCC BAA-798] gi|269789491|gb|ACZ41632.1| ribosomal protein L3 [Thermobaculum terrenum ATCC BAA-798] Length = 204 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 93/198 (46%), Positives = 122/198 (61%), Gaps = 5/198 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT +++ GR +PVTV+ V +T +++GY AVQ+G E VK Sbjct: 1 MVEGLIGKKIGMTHIFDENGRFVPVTVIQAGPNFVTFIKTKERDGYEAVQLGFEE--VKK 58 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + KP RG N+ P + L EF+ +L VG S F G+ VDVTG + GKGF Sbjct: 59 LKKPERGHLK--NLPPLRHLREFKADNISEL-QVGQKVDASIFQAGEKVDVTGTSKGKGF 115 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH FGG THG S HR+ GS G PG+V K ++MAGR GG RVTVK L VV Sbjct: 116 TGVVKRHGFGGGPKTHGQSDRHRAPGSIGATTTPGKVLKGQRMAGRAGGERVTVKRLTVV 175 Query: 181 SVDDKRGLILVKGCVPGA 198 +VD R L+LVKG VPGA Sbjct: 176 AVDTDRNLLLVKGAVPGA 193 >gi|111023096|ref|YP_706068.1| 50S ribosomal protein L3 [Rhodococcus jostii RHA1] gi|226365595|ref|YP_002783378.1| 50S ribosomal protein L3 [Rhodococcus opacus B4] gi|123339772|sp|Q0S3H6|RL3_RHOSR RecName: Full=50S ribosomal protein L3 gi|254803687|sp|C1B012|RL3_RHOOB RecName: Full=50S ribosomal protein L3 gi|110822626|gb|ABG97910.1| 50S ribosomal protein L3 [Rhodococcus jostii RHA1] gi|226244085|dbj|BAH54433.1| 50S ribosomal protein L3 [Rhodococcus opacus B4] Length = 218 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 88/208 (42%), Positives = 123/208 (59%), Gaps = 2/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ V RT +++GY AVQ+ G + V+K Sbjct: 8 GILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQIRTEERDGYSAVQLAFGAIDPRKVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V+P++ + E RV D VG + F G VDVTG + GKGF+G Sbjct: 68 PTSGQFAKAGVTPRRHVVELRV-ADTSEYEVGQELTAEVFEDGAYVDVTGTSKGKGFAGT 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G A+HG HR GS G PGRVFK +M+GRMG +R+T +NL V VD Sbjct: 127 MKRHGFAGQGASHGAQAVHRRPGSIGGCATPGRVFKGMRMSGRMGSDRITTQNLSVHKVD 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 + GL+L+KG +PG +K ++V+ + K Sbjct: 187 AENGLLLIKGAIPG-RKGGLVIVKSAVK 213 >gi|288554725|ref|YP_003426660.1| 50S ribosomal protein L3 [Bacillus pseudofirmus OF4] gi|288545885|gb|ADC49768.1| 50S ribosomal protein L3 [Bacillus pseudofirmus OF4] Length = 208 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 96/212 (45%), Positives = 129/212 (60%), Gaps = 5/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ + V+ +T++ +GY A+Q+G + K N Sbjct: 1 MTKGILGRKIGMTQVFAENGEVIPVTVIEAEPNVVLQKKTVESDGYEAIQIGFADQKKSN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G + N +PK+ + E R D L VG+ FT G +VDVTG + GKGF Sbjct: 61 TNKPQEGHAAKANTAPKRFMKEIR--NFDASLEVGNEVKVDTFTAGDVVDVTGTSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRHN +HG S HR GS G P RVFK K + GRMGG VTV+NLE+V Sbjct: 119 QGAIKRHNQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGETVTVQNLEIV 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD R L+LVKG VPGAKK S++ V+ + K+ Sbjct: 177 KVDTDRNLLLVKGNVPGAKK-SYVSVQSAVKA 207 >gi|257463961|ref|ZP_05628346.1| 50S ribosomal protein L3P [Fusobacterium sp. D12] gi|317061484|ref|ZP_07925969.1| LSU ribosomal protein L3P [Fusobacterium sp. D12] gi|313687160|gb|EFS23995.1| LSU ribosomal protein L3P [Fusobacterium sp. D12] Length = 208 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 90/209 (43%), Positives = 132/209 (63%), Gaps = 3/209 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++A+K+GMT ++ +G+ +PVTV+ V+ +T + +GY A+Q+G E K KN + Sbjct: 2 SGILAKKIGMTQIFE-DGKFVPVTVVEAGPNYVLQKKTEETDGYTALQLGFDEKKEKNTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ V P++ + E +V + +G F+ + VD+TG + GKG SG Sbjct: 61 KPLMGIFNKAGVKPQRFVRELKVDSVEGY-ELGQEIKVDVFSEVEYVDITGTSKGKGTSG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGG RATHGVS +HR GS G PG+V K +MAGR G VTV+NL+VV V Sbjct: 120 VMKRHGFGGNRATHGVSRNHRLGGSIGQSSWPGKVLKGLRMAGRHGNATVTVQNLKVVRV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D L+L+KG VPGA KN +++++ + K Sbjct: 180 DADNNLLLIKGAVPGA-KNGYLVIKPAIK 207 >gi|262199869|ref|YP_003271078.1| 50S ribosomal protein L3 [Haliangium ochraceum DSM 14365] gi|262083216|gb|ACY19185.1| 50S ribosomal protein L3 [Haliangium ochraceum DSM 14365] Length = 243 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 92/216 (42%), Positives = 131/216 (60%), Gaps = 4/216 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR G++ +KLGMT V+ +G RIPVTV+ VV RT +++GY A+ VG GE + Sbjct: 3 MRMGILGKKLGMTQVFAEDGERIPVTVIQTGPNYVVGKRTEERDGYSALVVGFGEKPARL 62 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSY-FTVGQLVDVTGMTIGK 118 +KP+ G F + V P + EFR+ D+ VG S F G +DVTG + GK Sbjct: 63 ANKPLAGQFKN-GVKPPRMQREFRLPADEVAKYEVGQELKISEVFEAGIPLDVTGTSKGK 121 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G+ G MKRHN G +A+HGV R GS GCR PGRV K K+M+GRMGG R TV+NL+ Sbjct: 122 GYQGVMKRHNMSGTKASHGVHEYFRHGGSIGCRLTPGRVHKGKRMSGRMGGERKTVQNLQ 181 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 +V + ++ +LV+G +PG + ++++R + AV Sbjct: 182 LVQILEEDNAVLVRGAIPGPNQ-GYVMLRKAATRAV 216 >gi|78221846|ref|YP_383593.1| 50S ribosomal protein L3 [Geobacter metallireducens GS-15] gi|109893431|sp|Q39Y06|RL3_GEOMG RecName: Full=50S ribosomal protein L3 gi|78193101|gb|ABB30868.1| LSU ribosomal protein L3P [Geobacter metallireducens GS-15] Length = 210 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 95/220 (43%), Positives = 134/220 (60%), Gaps = 19/220 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52 M+ G++A+KLGMT ++ +GRRIPVTV+ C V+ +T++ +GY A+QVG Sbjct: 1 MKKGLIAKKLGMTQIFADDGRRIPVTVVEAGPCIVLQKKTVETDGYNAIQVGFLAKDADK 60 Query: 53 AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 +G A V + +G F+ + EFRV+ D D +G + F G VDVT Sbjct: 61 SGRALVGHCKSAGQGVFTYIR--------EFRVE-DVDRYTIGDSITAEIFAPGDYVDVT 111 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G +IGKGF G +KR F G R++HG S HR+ GS G P RVFKNKKM G++G RV Sbjct: 112 GTSIGKGFQGVIKRWGFRGGRSSHG-SCFHRAPGSIGSSAWPSRVFKNKKMPGQLGNERV 170 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 TV+ L+VV VD L+L++G +PGA KN +L++DS K+ Sbjct: 171 TVQRLQVVRVDTADNLLLIRGAIPGA-KNGILLLKDSVKA 209 >gi|304413145|ref|ZP_07394618.1| 50S ribosomal subunit protein L3 [Candidatus Regiella insecticola LSR1] gi|304283988|gb|EFL92381.1| 50S ribosomal subunit protein L3 [Candidatus Regiella insecticola LSR1] Length = 258 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 94/219 (42%), Positives = 125/219 (57%), Gaps = 25/219 (11%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT V+ EG IPVTV+ ++ +V + + +GY AVQV G+ K + K Sbjct: 28 GLIGKKLGMTRVFTEEGVSIPVTVIEIEKNRVTQVKDIKTDGYCAVQVTTGQKKTSRLKK 87 Query: 64 PMRGFFSSVN------------------------VSPKKKLFEFRVQKDDDLLPVGSVFS 99 P RG F V+ + L+EFR+ +D L G + Sbjct: 88 PQRGHFEGTKTIRSKRATLDNPEIIKEVLTSKDPVTAGRGLWEFRIAEDQKFLR-GEEIT 146 Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159 F + VDVTG + GKGF+G +KR NF ATHG S+SHR+ GS G Q PG+VFK Sbjct: 147 VEIFADVKKVDVTGTSKGKGFAGVVKRWNFRTQDATHGNSLSHRAPGSIGQNQTPGKVFK 206 Query: 160 NKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGA 198 KKMAG +G RVTV++L+VV VD KR L+LVKG VPGA Sbjct: 207 GKKMAGHLGDERVTVQSLDVVRVDAKRNLLLVKGAVPGA 245 >gi|25027078|ref|NP_737132.1| 50S ribosomal protein L3 [Corynebacterium efficiens YS-314] gi|259506793|ref|ZP_05749693.1| 50S ribosomal protein L3 [Corynebacterium efficiens YS-314] gi|42559646|sp|Q8FS80|RL3_COREF RecName: Full=50S ribosomal protein L3 gi|23492358|dbj|BAC17332.1| putative 50S ribosomal protein L3 [Corynebacterium efficiens YS-314] gi|259165664|gb|EEW50218.1| 50S ribosomal protein L3 [Corynebacterium efficiens YS-314] Length = 218 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 87/215 (40%), Positives = 127/215 (59%), Gaps = 6/215 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT +++ E R IPVTV+ C V RT++ +GY A+Q+ GE + V++ Sbjct: 8 GILGTKLGMTQIFDEENRVIPVTVVEAGPCVVSQIRTVETDGYNAIQIAYGEIDPRKVNQ 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 P+ G F V+P++ + E R+ DD+ VG + F + VDVTG + GKG++ Sbjct: 68 PLTGHFKKAGVTPRRHVTEIRM---DDVSGYEVGQDVTVEIFNDVKFVDVTGTSKGKGYA 124 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 GAMKRH F G A HG +HR G G PGR+FK K+MAGRMG +RVT +NL+V Sbjct: 125 GAMKRHGFAGQGAGHGNQAAHRRVGGIGAAATPGRIFKGKRMAGRMGNDRVTTQNLKVQK 184 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 +D LIL+KG +PG + + V+ + K + Sbjct: 185 IDADANLILIKGAIPG-NRGGIVTVKTAVKGGAHA 218 >gi|52840574|ref|YP_094373.1| 50S ribosomal protein L3 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54296365|ref|YP_122734.1| 50S ribosomal protein L3 [Legionella pneumophila str. Paris] gi|148361053|ref|YP_001252260.1| 50S ribosomal protein L3 [Legionella pneumophila str. Corby] gi|81822648|sp|Q5X859|RL3_LEGPA RecName: Full=50S ribosomal protein L3 gi|81823474|sp|Q5ZYP3|RL3_LEGPH RecName: Full=50S ribosomal protein L3 gi|166233152|sp|A5IHR4|RL3_LEGPC RecName: Full=50S ribosomal protein L3 gi|52627685|gb|AAU26426.1| 50S ribosomal protein L3 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750150|emb|CAH11542.1| 50S ribosomal subunit protein L3 [Legionella pneumophila str. Paris] gi|148282826|gb|ABQ56914.1| 50S ribosomal protein L3 [Legionella pneumophila str. Corby] Length = 216 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 91/198 (45%), Positives = 122/198 (61%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ EG +PV+V+ + +V +T +GY AVQ+ G K Sbjct: 1 MMIGLLGRKIGMTRVFTPEGVSVPVSVVEVQPNRVSQVKTAANDGYSAVQLTGGTKKSSK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKP+ G F+ + EFR+ +D P + FT GQ VDV+G+T GKGF Sbjct: 61 VSKPVAGHFAKAQIDAGDMQVEFRIDSEDAFTPGQVISVADVFTAGQYVDVSGLTKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNF A+HG S SHR GS G Q PGRVFK KKMAG MG R T+++LE+V Sbjct: 121 AGTVKRHNFRTQDASHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNARCTIQSLELV 180 Query: 181 SVDDKRGLILVKGCVPGA 198 VD +R L+L+KG +PGA Sbjct: 181 KVDSERNLLLIKGAIPGA 198 >gi|218885187|ref|YP_002434508.1| 50S ribosomal protein L3 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226725164|sp|B8DN96|RL3_DESVM RecName: Full=50S ribosomal protein L3 gi|218756141|gb|ACL07040.1| ribosomal protein L3 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 209 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 92/204 (45%), Positives = 122/204 (59%), Gaps = 2/204 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT ++ +G + VTV+ C V+ R + +GY AVQ+ EAK K+V+K Sbjct: 6 GILGRKVGMTRIFASDGSAVAVTVIQAGPCPVIQVRNGETDGYDAVQIAFEEAKEKHVTK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P RG F+ + L E R++ + VG + S F G+ V VTG +IGKG+ G Sbjct: 66 PARGHFAKAGKGLFRNLREIRLEAPAEF-EVGQELTVSLFAAGEKVKVTGTSIGKGYQGV 124 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 M+R NF G + THG HRS GS G PG VFK KKMAG G RVTVKNLE+V + Sbjct: 125 MRRWNFAGSKDTHGCEKVHRSGGSIGNNTFPGHVFKGKKMAGHWGDERVTVKNLEIVDIR 184 Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207 + +ILVKG VPG KN +LVR Sbjct: 185 AEDNVILVKGAVPGP-KNGLVLVR 207 >gi|319761138|ref|YP_004125075.1| 50S ribosomal protein l3 [Alicycliphilus denitrificans BC] gi|330822996|ref|YP_004386299.1| 50S ribosomal protein L3 [Alicycliphilus denitrificans K601] gi|317115699|gb|ADU98187.1| 50S ribosomal protein L3 [Alicycliphilus denitrificans BC] gi|329308368|gb|AEB82783.1| 50S ribosomal protein L3 [Alicycliphilus denitrificans K601] Length = 224 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 90/216 (41%), Positives = 130/216 (60%), Gaps = 13/216 (6%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G +PVTV+ + N +V +T + +GY+A+QV G K V+K Sbjct: 8 GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVALQVTFGSRKASRVTK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKD-------DDLLPVGSVFSPSYFTVGQLVDVTGMTI 116 P G + V + + EF V + +PV VF+ VGQ VDV G +I Sbjct: 68 PEAGHLAKAGVEAGEIIREFPVTAEVAGKYAAGATVPVADVFA-----VGQKVDVQGTSI 122 Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 GKG++G +KRHNFG RA+HG S SH GS G QDPGR+F KKM G +G VT +N Sbjct: 123 GKGYAGTIKRHNFGSQRASHGNSRSHNVPGSIGMAQDPGRIFPGKKMTGHLGDATVTTQN 182 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 L+VV +D+ R L+L+KG VPG+ K ++ VR + K+ Sbjct: 183 LDVVRIDEARQLLLIKGAVPGS-KGGFVTVRPAVKA 217 >gi|269140570|ref|YP_003297271.1| 50S ribosomal protein L3 [Edwardsiella tarda EIB202] gi|267986231|gb|ACY86060.1| 50S ribosomal protein L3 [Edwardsiella tarda EIB202] gi|304560359|gb|ADM43023.1| LSU ribosomal protein L3p (L3e) [Edwardsiella tarda FL6-60] Length = 199 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 88/194 (45%), Positives = 122/194 (62%), Gaps = 1/194 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++ +G IPVTV+ ++ +V + LD +GY A+QV G K V+KP G F+ Sbjct: 1 MTRIFTEDGVSIPVTVIEIEANRVTQVKDLDNDGYRAIQVTTGSKKANRVTKPEAGHFAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 V + L EFR+ + ++ +G S F + VDVTG++ GKGF+G +KR NF Sbjct: 61 AGVEAGRVLREFRLSEGEEFT-IGQNISVEIFADVKKVDVTGISKGKGFAGTVKRWNFRT 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 ATHG S+SHR+ GS G Q PG+VFK KKMAG++G RVTV++L+VV VD +R L+LV Sbjct: 120 QDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVDAERNLLLV 179 Query: 192 KGCVPGAKKNSWIL 205 KG VPGA I+ Sbjct: 180 KGAVPGATGGDLIV 193 >gi|329901062|ref|ZP_08272688.1| LSU ribosomal protein L3p (L3e) [Oxalobacteraceae bacterium IMCC9480] gi|327549262|gb|EGF33840.1| LSU ribosomal protein L3p (L3e) [Oxalobacteraceae bacterium IMCC9480] Length = 218 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 126/212 (59%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GM ++ +G IPVTV+ + N +V +T + +GY +VQV G+ + Sbjct: 1 MSLGLVGRKVGMMRIFTDDGDSIPVTVVDVSNNRVTQIKTPETDGYTSVQVAFGQRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQK-DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V++ G + V L EFR+ + G + + S F VGQ VDV G++IGKG Sbjct: 61 VNQATAGHHAKAGVEAGTVLKEFRIDAVKASEMKAGDIVAASLFEVGQKVDVQGISIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RATHG S SH GS G QDPGRVF K+M G MG VT +NLE+ Sbjct: 121 YAGVIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTTQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D R L+L+KG VPGA KN ++V + K Sbjct: 181 ARIDADRQLLLIKGAVPGA-KNGKVVVSPAVK 211 >gi|325288578|ref|YP_004264759.1| LSU ribosomal protein L3P [Syntrophobotulus glycolicus DSM 8271] gi|324963979|gb|ADY54758.1| LSU ribosomal protein L3P [Syntrophobotulus glycolicus DSM 8271] Length = 209 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 92/211 (43%), Positives = 130/211 (61%), Gaps = 7/211 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ +G+ IPVTV+ C V+ +T +GY A+QVG E + + Sbjct: 1 MSKGILGKKIGMTQIFLEDGKLIPVTVVEAGPCYVLQKKTQASDGYNAIQVGFSEIRERL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP G F V+V P + + EFR D + +G + F+ G +DV G + GKGF Sbjct: 61 VNKPKLGHFKKVDVKPSRFIREFRTD-DVESFEIGQTINADVFSTGDKIDVVGTSRGKGF 119 Query: 121 SGAMKRHNFGGLRAT--HGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 +G KRH GG R HG HR+ GS G + P RVFK +++ GR+GG RVTV+NLE Sbjct: 120 AGMHKRH--GGRRGPMGHGSKYHHRT-GSMGAK-GPARVFKGRELPGRLGGERVTVQNLE 175 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +V VD + LIL+KGCVPGAKK+ IL + S Sbjct: 176 IVRVDADKNLILIKGCVPGAKKSLLILKKTS 206 >gi|256380598|ref|YP_003104258.1| ribosomal protein L3 [Actinosynnema mirum DSM 43827] gi|255924901|gb|ACU40412.1| ribosomal protein L3 [Actinosynnema mirum DSM 43827] Length = 216 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 91/208 (43%), Positives = 123/208 (59%), Gaps = 2/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ + V RT + +GY AVQ+ G + V K Sbjct: 8 GLLGTKLGMTQVFDENNRVVPVTVVKAEPNVVTQVRTQENDGYSAVQLAFGAIDPRKVIK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F+ V+P++ L E R D VG + F G +VDV G + GKG++G Sbjct: 68 PVAGHFAKAGVTPRRHLAELRT-TDASEYQVGQEITAEVFEAGAVVDVVGTSRGKGYAGV 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GL A+HG HRS GS G PGRVFK +MAGRMG RVT +NL+V VD Sbjct: 127 MKRHGFAGLGASHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGHARVTTQNLKVFRVD 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 + GL+L+KG VPG K + + V+ + K Sbjct: 187 AESGLLLIKGAVPGPKGGT-VFVKTAAK 213 >gi|296131836|ref|YP_003639083.1| 50S ribosomal protein L3 [Thermincola sp. JR] gi|296030414|gb|ADG81182.1| 50S ribosomal protein L3 [Thermincola potens JR] Length = 209 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 88/212 (41%), Positives = 130/212 (61%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++N +G +PVTV+ C VV +T++ +GY ++Q+G GE + Sbjct: 1 MSKGILGKKIGMTQIFNEQGEVLPVTVVEAGPCVVVQKKTVETDGYNSIQLGFGEKRESL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP++G F+ V P K L EF+V DD +G F G+ VDV G + GKGF Sbjct: 61 LTKPLKGHFAKAGVKPMKYLKEFKVVNIDDYQ-LGQEIKVDIFEAGERVDVEGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR+NF HG S SHR GS G + P RVFK K G +G +VT++NLE+V Sbjct: 120 AGTIKRYNFQRGPMAHG-SKSHRRVGSAGAK-GPARVFKGTKRPGHLGAEKVTIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG +PG K S + V+ S K+ Sbjct: 178 KVDPERNLLLIKGAIPGP-KGSLVAVKSSVKA 208 >gi|148273801|ref|YP_001223362.1| 50S ribosomal protein L3 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|212288254|sp|A5CUB3|RL3_CLAM3 RecName: Full=50S ribosomal protein L3 gi|147831731|emb|CAN02700.1| 50S ribosomal protein L3 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 217 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 92/209 (44%), Positives = 124/209 (59%), Gaps = 2/209 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 +G++ KLGMT V++ + IPVTV+ + V RT + +GY A+Q+ G+ + Sbjct: 9 TGLLGTKLGMTQVWDENNKLIPVTVVQITPNVVTQVRTPEVDGYGAIQIAYGQIDPRKAD 68 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P++ L E R D +G + F G VDV G + GKGF+G Sbjct: 69 KPSTGHFDKAGVTPRRHLTEVRTA-DFAEYALGQEITVGAFEPGTKVDVVGTSKGKGFAG 127 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF G+ A+HG +HR GS G P RVFK +MAGRMGG RVTV NL V SV Sbjct: 128 VMKRHNFKGVSASHGSHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGERVTVLNLVVHSV 187 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D ++GL+LVKG VPGA + + VR++ K Sbjct: 188 DAEKGLLLVKGAVPGA-RGRIVFVRNAVK 215 >gi|225011647|ref|ZP_03702085.1| ribosomal protein L3 [Flavobacteria bacterium MS024-2A] gi|225004150|gb|EEG42122.1| ribosomal protein L3 [Flavobacteria bacterium MS024-2A] Length = 205 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 90/206 (43%), Positives = 129/206 (62%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ +G+ IP TVL L C V RT +GY A+Q+G + K V+ Sbjct: 2 SGLIGKKIGMTSLFDEKGKNIPCTVLELGPCVVTQVRTTAVDGYEALQLGFDDKAEKKVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F N PKKKL EF Q ++ L +G + +F G+ VDV+G + GKGF G Sbjct: 62 KAAAGHFKKANSVPKKKLVEF--QNFEEELNLGDTITVEHFNEGEFVDVSGTSKGKGFQG 119 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH F G+ +ATHG R+ GS G P RVFK +MAG+MG +V V+NL VV Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGQMGNVKVKVQNLRVVK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L++VKGCVPG KN++++V+ Sbjct: 180 VVPEKNLLVVKGCVPG-HKNAYVIVQ 204 >gi|296105878|ref|YP_003617578.1| large subunit ribosomal protein L3 [Legionella pneumophila 2300/99 Alcoy] gi|295647779|gb|ADG23626.1| large subunit ribosomal protein L3 [Legionella pneumophila 2300/99 Alcoy] gi|307609138|emb|CBW98585.1| 50S ribosomal subunit protein L3 [Legionella pneumophila 130b] Length = 215 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 90/195 (46%), Positives = 121/195 (62%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ EG +PV+V+ + +V +T +GY AVQ+ G K VSK Sbjct: 3 GLLGRKIGMTRVFTPEGVSVPVSVVEVQPNRVSQVKTAANDGYSAVQLTGGTKKSSKVSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F+ + EFR+ +D P + FT GQ VDV+G+T GKGF+G Sbjct: 63 PVAGHFAKAQIDAGDMQVEFRIDSEDAFTPGQVISVADVFTAGQYVDVSGLTKGKGFAGT 122 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KRHNF A+HG S SHR GS G Q PGRVFK KKMAG MG R T+++LE+V VD Sbjct: 123 VKRHNFRTQDASHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNARCTIQSLELVKVD 182 Query: 184 DKRGLILVKGCVPGA 198 +R L+L+KG +PGA Sbjct: 183 SERNLLLIKGAIPGA 197 >gi|295394348|ref|ZP_06804573.1| 50S ribosomal protein L3 [Brevibacterium mcbrellneri ATCC 49030] gi|294972806|gb|EFG48656.1| 50S ribosomal protein L3 [Brevibacterium mcbrellneri ATCC 49030] Length = 224 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 91/210 (43%), Positives = 122/210 (58%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ +PVTV+ + V R + +GY AVQ+G GE + V+K Sbjct: 17 GLMGTKLGMTQVWDENNNLVPVTVISASSNVVTQIRNEEVDGYSAVQIGYGEIDPRKVNK 76 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G F V+P++ L E R D +G S F G VDVT T GKGF+G Sbjct: 77 PAKGHFEKAGVAPRRHLVELRTA-DAGEYELGQELSTEVFEAGIKVDVTANTKGKGFAGV 135 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G+ A+HG +HR GS G PGRVFK +MAGRMG R T +NL + S+D Sbjct: 136 MKRHGFAGVGASHGQHRNHRKPGSIGGAATPGRVFKGMRMAGRMGNVRHTTQNLTIHSID 195 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + L+L+KG VPG K + +LVR + K A Sbjct: 196 SENNLLLIKGAVPGP-KGAVVLVRSAAKGA 224 >gi|120402316|ref|YP_952145.1| 50S ribosomal protein L3 [Mycobacterium vanbaalenii PYR-1] gi|166233168|sp|A1T4N9|RL3_MYCVP RecName: Full=50S ribosomal protein L3 gi|119955134|gb|ABM12139.1| LSU ribosomal protein L3P [Mycobacterium vanbaalenii PYR-1] Length = 218 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 89/214 (41%), Positives = 129/214 (60%), Gaps = 7/214 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ + +PVTV+ V RT +++GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL----LPVGSVFSPSYFTVGQLVDVTGMTIG 117 +KP+ G +++ V+P++ L E R+ DD+ VG + F G VDVTG + G Sbjct: 63 NKPVTGQYAAAGVNPRRHLAELRL--DDEAAAAEYEVGQELTAEIFADGAYVDVTGTSKG 120 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF+G MKRH F G A+HG HR GS G PGRVFK +M+GRMG +RVT +NL Sbjct: 121 KGFAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGSDRVTTQNL 180 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +V VD + G++L+KG +PG + ++VR + K Sbjct: 181 KVHKVDAENGVLLIKGAIPG-RNGGLVVVRSAIK 213 >gi|254517470|ref|ZP_05129526.1| ribosomal protein L3 [Clostridium sp. 7_2_43FAA] gi|226911219|gb|EEH96420.1| ribosomal protein L3 [Clostridium sp. 7_2_43FAA] Length = 209 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT +++ G+ +PVTV+ C VV +T++K+GY A+QVG G+ + K Sbjct: 1 MKKAILGKKIGMTQIFDANGKVVPVTVVEAGPCVVVQKKTIEKDGYEAIQVGFGDVREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G ++ VS K+KL EFR++ D VG F G +DV+G++ GKGF Sbjct: 61 VNKPKKGHYAKAGVSLKRKLKEFRLE-DCSAYEVGQEIKADLFEAGDKIDVSGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR N THG S HR+ GS G DP R FKNK M G MG TV NLEVV Sbjct: 120 QGVIKRWNANRGPMTHG-SKFHRAVGSMGASSDPSRTFKNKNMPGHMGAVNTTVLNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ LIL+KG +PG K + +++R++ K+ Sbjct: 179 KVIAEKNLILIKGGIPGPNKGT-VVIRNAVKA 209 >gi|257440269|ref|ZP_05616024.1| 50S ribosomal protein L3 [Faecalibacterium prausnitzii A2-165] gi|257197303|gb|EEU95587.1| 50S ribosomal protein L3 [Faecalibacterium prausnitzii A2-165] Length = 210 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 126/212 (59%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT +++ G+ IPVTV+ C VV +T++ +GY AVQ+G GE K Sbjct: 1 MVKGIIGKKVGMTQLFDESGKVIPVTVIEAGPCTVVQKKTVESDGYQAVQLGFGEVSAKK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F NV+PKK L EFR++ D + VG V F G VDV G++ GKG+ Sbjct: 61 VNKAAAGHFKKANVAPKKTLREFRLE-DVSAMNVGDVLKADVFAAGDKVDVAGVSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR LR +HG R GS G +P RVF K++ G MG RVTV+NL VV Sbjct: 120 QGVIKRFGQHRLRESHGTGPVARHAGSMGAISNPSRVFPGKRLPGHMGFVRVTVQNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + LI VKG VPG+ K + + + +S K+ Sbjct: 180 KVDTENNLIAVKGAVPGS-KGTIVTLANSVKA 210 >gi|295694837|ref|YP_003588075.1| 50S ribosomal protein L3 [Bacillus tusciae DSM 2912] gi|295410439|gb|ADG04931.1| 50S ribosomal protein L3 [Bacillus tusciae DSM 2912] Length = 210 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 91/211 (43%), Positives = 130/211 (61%), Gaps = 4/211 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT V+ +GR +PVTV+ C V+ +T++ +GY+A+Q+G + K + ++ Sbjct: 3 GILGRKLGMTQVFREDGRVVPVTVIEAGPCIVLQKKTVETDGYVAIQLGFADKKGRRANR 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G + +PKK + E R D VG F G+LVDVTG + GKG++G Sbjct: 63 PETGHAAKSGATPKKYIREIR-NVDIAKYEVGQELRADVFAPGELVDVTGTSKGKGYAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KRHN HG S HR GS G P RVFK + + GRMGG RVTV+NLEV+ D Sbjct: 122 IKRHNQARGPMAHG-SKYHRGVGSLGS-IAPNRVFKGQTLPGRMGGERVTVQNLEVIQAD 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 +R L+LVKG VPG +NS+++V+ + K+AV Sbjct: 180 PERNLLLVKGAVPGP-RNSYVIVKSAVKAAV 209 >gi|331699176|ref|YP_004335415.1| 50S ribosomal protein L3 [Pseudonocardia dioxanivorans CB1190] gi|326953865|gb|AEA27562.1| 50S ribosomal protein L3 [Pseudonocardia dioxanivorans CB1190] Length = 217 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 89/209 (42%), Positives = 126/209 (60%), Gaps = 2/209 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 +G++ +KLGMT V++ R +PVTV+ V R+ + +GY+AVQ+ G + V+ Sbjct: 7 TGILGKKLGMTQVFDENNRVVPVTVVQAGPNVVTQIRSQETDGYVAVQLAFGAVDPRRVN 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V+P++ E R D +G + F G +VDV G + GKG++G Sbjct: 67 KPETGHFAKAGVTPRRYTVELRT-TDAGEYSLGQEITAEVFEPGAVVDVVGTSKGKGYAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF GL A+HG HRS GS G PGRVFK +MAGRMG RVT +NL V V Sbjct: 126 VMKRHNFKGLGASHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGSVRVTTQNLTVHRV 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +RGL+L+KG VPG + + ++V+ + K Sbjct: 186 DAERGLLLIKGAVPGP-RGALVVVKTAAK 213 >gi|2113866|emb|CAA73672.1| rplC [Mycobacterium bovis BCG] Length = 217 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 124/212 (58%), Gaps = 3/212 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ R PVTV+ V RT +++GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDESNRVAPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP--VGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP+ G +++ V+P++ L E R+ D VG + F G VDVTG + GKG Sbjct: 63 NKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV NL V Sbjct: 123 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLV 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + G++L+KG VPG + ++VR + K Sbjct: 183 HKVDAENGVLLIKGAVPG-RTGGLVMVRSAIK 213 >gi|108797986|ref|YP_638183.1| 50S ribosomal protein L3 [Mycobacterium sp. MCS] gi|119867082|ref|YP_937034.1| 50S ribosomal protein L3 [Mycobacterium sp. KMS] gi|126433648|ref|YP_001069339.1| 50S ribosomal protein L3 [Mycobacterium sp. JLS] gi|123070590|sp|Q1BDA7|RL3_MYCSS RecName: Full=50S ribosomal protein L3 gi|166233164|sp|A3PVC1|RL3_MYCSJ RecName: Full=50S ribosomal protein L3 gi|166233165|sp|A1UBN6|RL3_MYCSK RecName: Full=50S ribosomal protein L3 gi|108768405|gb|ABG07127.1| LSU ribosomal protein L3P [Mycobacterium sp. MCS] gi|119693171|gb|ABL90244.1| LSU ribosomal protein L3P [Mycobacterium sp. KMS] gi|126233448|gb|ABN96848.1| LSU ribosomal protein L3P [Mycobacterium sp. JLS] Length = 217 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 88/212 (41%), Positives = 125/212 (58%), Gaps = 3/212 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ + +PVTV+ V RT +++GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTPERDGYSAVQIAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP+ G F++ V+P++ L E R+ + VG + F+ G VDVTG + GKG Sbjct: 63 NKPVTGQFAAAGVNPRRHLAELRLDDESAAADYEVGQELTAEVFSDGAYVDVTGTSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKRH F G A HG HR GS G PGRVFK +M+GRMG +RVT +NL V Sbjct: 123 FAGTMKRHGFKGQGAAHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGSDRVTTQNLVV 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD G++L+KG +PG + ++VR + K Sbjct: 183 HKVDAANGVLLIKGAIPG-RNGGLVMVRSAIK 213 >gi|170780733|ref|YP_001709065.1| 50S ribosomal protein L3 [Clavibacter michiganensis subsp. sepedonicus] gi|212288255|sp|B0RB39|RL3_CLAMS RecName: Full=50S ribosomal protein L3 gi|169155301|emb|CAQ00404.1| 50S ribosomal protein L3 [Clavibacter michiganensis subsp. sepedonicus] Length = 217 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 92/209 (44%), Positives = 124/209 (59%), Gaps = 2/209 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 +G++ KLGMT V++ + IPVTV+ + V RT + +GY A+Q+ G+ + Sbjct: 9 TGLLGTKLGMTQVWDENNKLIPVTVVQITPNVVTQVRTPEVDGYGAIQIAYGQIDPRKAD 68 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P++ L E R D +G + F G VDV G + GKGF+G Sbjct: 69 KPSTGHFDKAGVTPRRHLTEVRTA-DFAEYTLGQEITVGAFEPGTKVDVVGTSKGKGFAG 127 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF G+ A+HG +HR GS G P RVFK +MAGRMGG RVTV NL V SV Sbjct: 128 VMKRHNFKGVSASHGSHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGERVTVLNLVVHSV 187 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D ++GL+LVKG VPGA + + VR++ K Sbjct: 188 DAEKGLLLVKGAVPGA-RGRIVFVRNAVK 215 >gi|91791539|ref|YP_561190.1| 50S ribosomal protein L3 [Shewanella denitrificans OS217] gi|123061370|sp|Q12SV9|RL3_SHEDO RecName: Full=50S ribosomal protein L3 gi|91713541|gb|ABE53467.1| LSU ribosomal protein L3P [Shewanella denitrificans OS217] Length = 212 Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 89/206 (43%), Positives = 124/206 (60%), Gaps = 1/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G IPVTV+ + +V +TL+ +GY A+QV G K Sbjct: 1 MAIGLIGRKVGMTRIFTEDGVSIPVTVIEVAGNRVTQVKTLETDGYRALQVTTGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++K G F+ V + L+E R+ + + + VG+ + F VDVTG + GKG Sbjct: 61 ITKAEAGHFAKGGVEAGRGLWEMRLADGEGEGIEVGAELNVDIFAETVKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF THG S++HRS+GS G Q PGRVFK KKM+G MG +VT +NL V Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAEQVTTQNLHV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205 V VD +R LILV+G VPGA I+ Sbjct: 181 VRVDSERNLILVRGAVPGATNGDLII 206 >gi|226305341|ref|YP_002765299.1| 50S ribosomal protein L3 [Rhodococcus erythropolis PR4] gi|229489469|ref|ZP_04383332.1| 50S ribosomal protein L3 [Rhodococcus erythropolis SK121] gi|259709732|sp|C0ZW25|RL3_RHOE4 RecName: Full=50S ribosomal protein L3 gi|226184456|dbj|BAH32560.1| 50S ribosomal protein L3 [Rhodococcus erythropolis PR4] gi|229323566|gb|EEN89324.1| 50S ribosomal protein L3 [Rhodococcus erythropolis SK121] Length = 218 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 88/213 (41%), Positives = 123/213 (57%), Gaps = 2/213 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ V RT +++GY AVQ+ G + V+K Sbjct: 8 GILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQIRTEERDGYSAVQLAFGAIDPRKVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V+P++ + E RV D VG + F G VDVTG + GKGF+G Sbjct: 68 PTSGQFTKAGVTPRRHVVELRVADTSDY-EVGQELTAEVFEDGAYVDVTGTSKGKGFAGT 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G A+HG HR GS G PGRVFK +M+GRMG +R+T +NL V VD Sbjct: 127 MKRHGFKGQGASHGTQAVHRRPGSIGGCATPGRVFKGMRMSGRMGSDRITTQNLSVHKVD 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 + GL+L+KG +PG +K ++V+ + K Sbjct: 187 AENGLLLIKGAIPG-RKGGLVIVKSAVKGGARA 218 >gi|320199504|gb|EFW74094.1| LSU ribosomal protein L3p (L3e) [Escherichia coli EC4100B] Length = 199 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 89/194 (45%), Positives = 121/194 (62%), Gaps = 1/194 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V+KP G F+ Sbjct: 1 MTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTKPEAGHFAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G +KR NF Sbjct: 61 AGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAGTVKRWNFRT 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV VD +R L+LV Sbjct: 120 QDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAERNLLLV 179 Query: 192 KGCVPGAKKNSWIL 205 KG VPGA + I+ Sbjct: 180 KGAVPGATGSDLIV 193 >gi|302523993|ref|ZP_07276335.1| 50S ribosomal protein L3 [Streptomyces sp. AA4] gi|302432888|gb|EFL04704.1| 50S ribosomal protein L3 [Streptomyces sp. AA4] Length = 216 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 91/208 (43%), Positives = 120/208 (57%), Gaps = 2/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ + R +PVTV+ V RT DK+GY AVQ+ G + V+K Sbjct: 8 GILGTKLGMTQVFDEQNRVVPVTVVKAGPNVVTQVRTTDKDGYAAVQLAFGAVDPRKVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ L E R D + VG + F G VDVTG + GKG++G Sbjct: 68 PRTGHFDKAGVTPRRHLAELRTT-DAETYEVGQEITAEVFEAGTTVDVTGTSKGKGYAGV 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G A+HG HR GS G PGRVFK +MAGRMG +RVT + L V +V Sbjct: 127 MKRHGFKGQGASHGAQAVHRKPGSIGGCATPGRVFKGLRMAGRMGSDRVTTQGLTVHAVR 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 + GL+L+KG VPG K + VR + K Sbjct: 187 AEDGLLLIKGAVPGP-KGGLLFVRSAAK 213 >gi|153812865|ref|ZP_01965533.1| hypothetical protein RUMOBE_03272 [Ruminococcus obeum ATCC 29174] gi|149831077|gb|EDM86166.1| hypothetical protein RUMOBE_03272 [Ruminococcus obeum ATCC 29174] Length = 210 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 93/212 (43%), Positives = 127/212 (59%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G+ IPVTVL C V +T + +GY AVQVG GE + K Sbjct: 1 MKKAILATKVGMTQIFNEDGQLIPVTVLQAGPCVVTQVKTEENDGYAAVQVGYGEIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G F V+ K+ + EFR + + VG F G +DVT ++ GKGF Sbjct: 61 VNKPEKGHFDKAGVAAKRFVKEFRFENAAEYT-VGQEIKTDIFADGDHIDVTAVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G DP +VFK K M G MG +VTV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKHMPGHMGNVQVTVQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + L+LVKG VPG KK S + ++++ KS Sbjct: 179 RVDTENNLLLVKGAVPGPKK-SLVTIKETVKS 209 >gi|227832219|ref|YP_002833926.1| 50S ribosomal protein L3 [Corynebacterium aurimucosum ATCC 700975] gi|262183926|ref|ZP_06043347.1| 50S ribosomal protein L3 [Corynebacterium aurimucosum ATCC 700975] gi|254803667|sp|C3PKQ2|RL3_CORA7 RecName: Full=50S ribosomal protein L3 gi|227453235|gb|ACP31988.1| 50S ribosomal protein L3 [Corynebacterium aurimucosum ATCC 700975] Length = 218 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 87/213 (40%), Positives = 122/213 (57%), Gaps = 2/213 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ E R +PVTV+ C V RT + +GY A+Q+ GE + V+K Sbjct: 8 GILGTKLGMTQVFDEENRVVPVTVVEAGPCVVTQIRTKETDGYNAIQIAFGEKDPRKVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ + E R+ D VG F VDVTG T G G++GA Sbjct: 68 PATGHFKKAGVTPRRYVAEIRMD-DTSAYEVGQEVKVDIFEGVSFVDVTGTTKGHGYAGA 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G A HG +HR G G PGRVFK K+MAGRMG +RVT +NL++ +D Sbjct: 127 MKRHGFAGQGAAHGNQAAHRRVGGIGGASFPGRVFKGKRMAGRMGQDRVTTQNLKIQKID 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 + L+L+KG +PGA + + V+ + K + Sbjct: 187 AESNLLLIKGAIPGA-RGGLVTVKTAVKGGAHA 218 >gi|160942901|ref|ZP_02090140.1| hypothetical protein FAEPRAM212_00377 [Faecalibacterium prausnitzii M21/2] gi|158445802|gb|EDP22805.1| hypothetical protein FAEPRAM212_00377 [Faecalibacterium prausnitzii M21/2] gi|295103925|emb|CBL01469.1| LSU ribosomal protein L3P [Faecalibacterium prausnitzii SL3/3] Length = 210 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 125/212 (58%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT +++ G+ IPVTV+ C VV +T++ +GY AVQ+G GE K Sbjct: 1 MVKGIIGKKVGMTQLFDESGKVIPVTVIEAGPCTVVQKKTVESDGYQAVQLGFGEVSAKK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F NV+PKK L EFR+ D + VG + F G VDV G++ GKG+ Sbjct: 61 VNKAAAGHFKKANVAPKKTLREFRLD-DVSAMNVGDILKADVFAAGDKVDVAGVSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR LR +HG R GS G +P RVF K++ G MG RVTV+NL VV Sbjct: 120 QGVIKRFGQHRLRESHGTGPVARHAGSMGAISNPSRVFPGKRLPGHMGCVRVTVQNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + LI VKG VPG+ K + I + +S K+ Sbjct: 180 KVDTENNLIAVKGAVPGS-KGTIITLANSVKA 210 >gi|254422678|ref|ZP_05036396.1| ribosomal protein L3 [Synechococcus sp. PCC 7335] gi|196190167|gb|EDX85131.1| ribosomal protein L3 [Synechococcus sp. PCC 7335] Length = 212 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 89/197 (45%), Positives = 119/197 (60%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT V++ G IPVTV+ C V +T +GY +VQ+G GE K K Sbjct: 1 MSVGILGTKLGMTQVFDETGNAIPVTVIQAGPCVVTQIKTEKTDGYSSVQIGYGEVKEKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G SP + L E+RV D +G + F GQ +DV+G++IGKGF Sbjct: 61 LNRPKLGHLKKSGASPLRHLREYRVS-DTGEFELGQALAADRFEAGQTIDVSGISIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KR+NF +HG S +HR+ GSTG PGRV+ KKMAGRMG +VT++ L VV Sbjct: 120 AGNQKRNNFRRGPMSHG-SKNHRAPGSTGAGTTPGRVYPGKKMAGRMGSEKVTIRKLSVV 178 Query: 181 SVDDKRGLILVKGCVPG 197 VD R L+LVKG VPG Sbjct: 179 RVDSDRNLLLVKGGVPG 195 >gi|78186070|ref|YP_374113.1| 50S ribosomal protein L3 [Chlorobium luteolum DSM 273] gi|109893534|sp|Q3B6G1|RL3_PELLD RecName: Full=50S ribosomal protein L3 gi|78165972|gb|ABB23070.1| LSU ribosomal protein L3P [Chlorobium luteolum DSM 273] Length = 209 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 87/202 (43%), Positives = 122/202 (60%), Gaps = 1/202 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT +YN + +P T++ C V + +K+GY AVQ+G GE K V+KP Sbjct: 4 ILGKKIGMTRLYNDKREAVPCTIIQAGPCFVTQVKNAEKDGYDAVQIGIGERKEHKVTKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M G + V+P + EF D L GS S F G++V+V G++ GKGF+G + Sbjct: 64 MLGHYKKAGVTPGYMMAEFDASMFDVELAAGSPVSVESFKEGEIVNVLGVSKGKGFAGVV 123 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHNFGG THG S R+ GS G DP R FK +M GRMG + VTV+NL+VV + Sbjct: 124 KRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFKGTRMGGRMGSDNVTVRNLQVVKIMA 183 Query: 185 KRGLILVKGCVPGAKKNSWILV 206 + LI+VKG VPG KNS++ + Sbjct: 184 ESNLIMVKGSVPGP-KNSYVKI 204 >gi|302388088|ref|YP_003823910.1| 50S ribosomal protein L3 [Clostridium saccharolyticum WM1] gi|302198716|gb|ADL06287.1| 50S ribosomal protein L3 [Clostridium saccharolyticum WM1] Length = 211 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 91/213 (42%), Positives = 129/213 (60%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++A K+GMT ++N G PVTVL C V +T++ +GY AVQVG + + K Sbjct: 1 MKKGILATKVGMTQIFNENGVLTPVTVLQAGPCVVTQVKTVENDGYSAVQVGYVDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKP++G F VS K+ + EF+++ + D V F G +D T ++ GKGF Sbjct: 61 VSKPIKGHFDKAGVSYKRYVREFKLE-NADQYSVKDEIKAEIFAAGDKIDATAISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G DP +VFK KKM G+MG +VT++NLE+V Sbjct: 120 QGAIKRHGQSRGPMAHG-SKFHRHAGSNGACSDPSKVFKGKKMPGQMGNKKVTIQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + LILVKG VPG KK S + ++++ K++ Sbjct: 179 RVDAENNLILVKGAVPGPKK-SLVTIKETVKAS 210 >gi|255324736|ref|ZP_05365850.1| 50S ribosomal protein L3 [Corynebacterium tuberculostearicum SK141] gi|255298211|gb|EET77514.1| 50S ribosomal protein L3 [Corynebacterium tuberculostearicum SK141] Length = 218 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 85/213 (39%), Positives = 123/213 (57%), Gaps = 2/213 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT V++ + R +PVTV+ C V RT + +GY A+Q+ GE + +K Sbjct: 8 GILGKKLGMTQVFDEDNRVVPVTVVEAGPCVVTQIRTPETDGYSAIQIAFGEIDPRKANK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+P++ + E R+ D VG F VDVTG T G G++GA Sbjct: 68 PVGGHFKKAGVTPRRHVAEIRMD-DTSAYEVGQEVKVDIFEGTTFVDVTGKTKGHGYAGA 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G A HG +HR G G PGRVFK K+MAGRMG +RVT +NL++ +D Sbjct: 127 MKRHGFAGQGAAHGNQAAHRRVGGIGGAATPGRVFKGKRMAGRMGHDRVTTQNLKIQKID 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 + L+L+KG +PGA + + V+ + K + Sbjct: 187 AESNLLLIKGAIPGA-RGGLVTVKTAVKGGAHA 218 >gi|317125872|ref|YP_004099984.1| 50S ribosomal protein L3P [Intrasporangium calvum DSM 43043] gi|315589960|gb|ADU49257.1| LSU ribosomal protein L3P [Intrasporangium calvum DSM 43043] Length = 221 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 86/202 (42%), Positives = 119/202 (58%), Gaps = 2/202 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V++ + R +PVTV+ C V R +GY AVQ+ G + V++PM G F Sbjct: 22 MTQVWDADNRLVPVTVVEAGPCVVTQVRNGATDGYDAVQIAFGAIDPRKVNQPMSGHFEK 81 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 V+P++ L E R D +G S F GQ VD TG T GKGF+G MKRH F G Sbjct: 82 AGVTPRRHLVELRTADAADY-ELGQEISADVFEAGQRVDATGTTKGKGFAGVMKRHGFAG 140 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 + ++HG +HR GS G PGRVF+ +MAGRMGG R T +NL++ +VD ++GL+L+ Sbjct: 141 VSSSHGSHRNHRKPGSIGGCATPGRVFRGMRMAGRMGGVRQTTQNLQIHAVDAEKGLLLI 200 Query: 192 KGCVPGAKKNSWILVRDSFKSA 213 KG VPG + +L+R + K A Sbjct: 201 KGAVPG-PRGGIVLIRTAAKGA 221 >gi|237786395|ref|YP_002907100.1| 50S ribosomal protein L3 [Corynebacterium kroppenstedtii DSM 44385] gi|259647406|sp|C4LL52|RL3_CORK4 RecName: Full=50S ribosomal protein L3 gi|237759307|gb|ACR18557.1| 50S ribosomal protein L3 [Corynebacterium kroppenstedtii DSM 44385] Length = 219 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 88/199 (44%), Positives = 120/199 (60%), Gaps = 6/199 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ + R +PVTV+ C V RT +K+GY A+Q+ G+ + V+K Sbjct: 8 GILGTKLGMTQVFDEDNRVVPVTVVEAGPCVVTQIRTEEKDGYSAIQIAYGDIDPRKVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLL---PVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 P G F+ V+P++ + E R+ DD+L VG + F + VDVTG T G GF Sbjct: 68 PQSGHFAKAGVTPRRYVTEIRM---DDVLSDYEVGQDVTVELFGDVKFVDVTGTTRGHGF 124 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRH F G A HG +HR G G PGRVFK +MAGRMG NRVT +NL++ Sbjct: 125 AGAMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGNNRVTTQNLKLF 184 Query: 181 SVDDKRGLILVKGCVPGAK 199 VD L+L+KG VPG + Sbjct: 185 KVDADSNLLLIKGAVPGIR 203 >gi|325269535|ref|ZP_08136151.1| 50S ribosomal protein L3 [Prevotella multiformis DSM 16608] gi|324988154|gb|EGC20121.1| 50S ribosomal protein L3 [Prevotella multiformis DSM 16608] Length = 204 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 85/203 (41%), Positives = 126/203 (62%), Gaps = 4/203 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G GEAK K SK Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKTVEKDGYKAVQLGFGEAKEKRTSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G F +PKK L EF+ ++ +L G + F + VD+ G + GKGF G Sbjct: 63 PQQGHFKKAGTTPKKHLAEFKFDEEYNL---GDTITVELFNDAKFVDIVGTSKGKGFQGV 119 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ ++THG R GS G P +VFK +MAG+MGG+RVT +NL+V+ V Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLQVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205 + L+LVKG V G ++ I+ Sbjct: 180 IPEHNLLLVKGSVAGCNGSTVII 202 >gi|310659502|ref|YP_003937223.1| 50S ribosomal protein L3 [Clostridium sticklandii DSM 519] gi|308826280|emb|CBH22318.1| 50S ribosomal subunit protein L3 [Clostridium sticklandii] Length = 208 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 94/207 (45%), Positives = 123/207 (59%), Gaps = 3/207 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 V+ RKLGMT V+ +GR +PVTV+ V + + +GY AVQV GE K K V+KP Sbjct: 4 VLGRKLGMTQVFAEDGRLVPVTVIEAGPMVVTQIKNKETDGYEAVQVAFGEVKEKRVNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +RG F+ V KK + EF+V+ D + F G+ VD G + GKGF G + Sbjct: 64 LRGHFAKAGVGFKKFVREFKVE-DLSAYSLAQEIKVDVFEAGEKVDAIGTSKGKGFQGPI 122 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHN THG S HR GS G DP RVFK KK+AG MG RVT++NLEVV VD Sbjct: 123 KRHNQSRGPMTHG-SRYHRGPGSMGAASDPSRVFKGKKLAGHMGAERVTIQNLEVVKVDV 181 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211 ++ LIL+KG VPG KK ++++ + K Sbjct: 182 EKNLILIKGAVPGPKKG-LVVIKKAIK 207 >gi|220930965|ref|YP_002507873.1| ribosomal protein L3 [Halothermothrix orenii H 168] gi|254803676|sp|B8D0C4|RL3_HALOH RecName: Full=50S ribosomal protein L3 gi|219992275|gb|ACL68878.1| ribosomal protein L3 [Halothermothrix orenii H 168] Length = 211 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 92/216 (42%), Positives = 133/216 (61%), Gaps = 5/216 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT +++ +G IPVTV+ C V+ + +++GY A+QVG + Sbjct: 1 MAKGIIGKKLGMTQIFDDDGNVIPVTVVQAGPCVVIQKKVEERDGYNALQVGFEDVPEHR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F V PKK + EF +D L G + F G+LVDVTG++ GKGF Sbjct: 61 VNKPLKGHFERAGVKPKKHVKEFMDFPED--LNEGDEITVDIFEEGELVDVTGISKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF +HG S HR+ GS G D RVFK +K+ GRMG +RVT++NLEVV Sbjct: 119 AGTIKRWNFSRGPMSHG-SRFHRAPGSIGA-VDASRVFKGQKLPGRMGHDRVTIQNLEVV 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 VD ++ L+L+KG VPG K + +R++ K A N Sbjct: 177 RVDSEKNLLLIKGSVPGPNK-GILTIREAVKKASNA 211 >gi|167039520|ref|YP_001662505.1| 50S ribosomal protein L3 [Thermoanaerobacter sp. X514] gi|300915229|ref|ZP_07132544.1| 50S ribosomal protein L3 [Thermoanaerobacter sp. X561] gi|307725153|ref|YP_003904904.1| 50S ribosomal protein L3 [Thermoanaerobacter sp. X513] gi|226730583|sp|B0K5P3|RL3_THEPX RecName: Full=50S ribosomal protein L3 gi|166853760|gb|ABY92169.1| ribosomal protein L3 [Thermoanaerobacter sp. X514] gi|300888953|gb|EFK84100.1| 50S ribosomal protein L3 [Thermoanaerobacter sp. X561] gi|307582214|gb|ADN55613.1| 50S ribosomal protein L3 [Thermoanaerobacter sp. X513] Length = 210 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 96/214 (44%), Positives = 131/214 (61%), Gaps = 7/214 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ RK GMT +++ +G IPVTV+ C VV +T++ +GY A+QVG G+ K K Sbjct: 1 MKKGILGRKHGMTQIFDEKGEVIPVTVIEAGPCVVVQKKTVETDGYNAIQVGFGDVKEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118 ++KP+ G F V K+ L EFR+ DD+ VGS F G V+VTG++ GK Sbjct: 61 LTKPLIGHFKKAGVPFKRYLREFRL---DDISGYEVGSEIKVDIFKPGDRVNVTGISKGK 117 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF+G +KR+ +HG S HR GS DPGR FK K M G MG RVT++NLE Sbjct: 118 GFAGVVKRYGANRGPMSHG-SKYHRRVGSMSATTDPGRTFKGKIMPGHMGHERVTIQNLE 176 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VV VD + L+LVKG VPG K S ++++DS KS Sbjct: 177 VVKVDPELNLLLVKGSVPGP-KGSLLIIKDSVKS 209 >gi|17547738|ref|NP_521140.1| 50S ribosomal protein L3 [Ralstonia solanacearum GMI1000] gi|42559667|sp|Q8XV12|RL3_RALSO RecName: Full=50S ribosomal protein L3 gi|17430043|emb|CAD16728.1| probable 50s ribosomal protein l3 [Ralstonia solanacearum GMI1000] Length = 220 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 91/213 (42%), Positives = 128/213 (60%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V+ +G IPVTVL + +V +T + +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGTRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + + EFR+ L +G F+V Q +DV G TIGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEIIVEFRIDATKAAELKLGDTIDVDLFSVDQKIDVQGTTIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR++F RA+HG S SH GS G QDPGRVF K+M G MG TV+NL + Sbjct: 121 YAGTIKRYHFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V +D +R L+LVKG VPGA K+ +++V + K+ Sbjct: 181 VRIDAERKLLLVKGAVPGA-KSGFVVVSPAVKA 212 >gi|224531994|ref|ZP_03672626.1| ribosomal protein L3 [Borrelia valaisiana VS116] gi|224511459|gb|EEF81865.1| ribosomal protein L3 [Borrelia valaisiana VS116] Length = 206 Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 94/209 (44%), Positives = 130/209 (62%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V+ G +PVTV+ ++ +T+D++GY A+ G+ + K VSK Sbjct: 3 GLIGKKVGMTQVFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKVSK 62 Query: 64 PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + S+ ++ PKK + E K D G F + VDVTG T GKGF G Sbjct: 63 PIKGQYKSLKDIEPKKYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D++R ILVKG VPGA K S+++V+ S K Sbjct: 179 DEERRAILVKGAVPGA-KGSFVVVKKSKK 206 >gi|114561336|ref|YP_748849.1| 50S ribosomal protein L3 [Shewanella frigidimarina NCIMB 400] gi|122301115|sp|Q089Q4|RL3_SHEFN RecName: Full=50S ribosomal protein L3 gi|114332629|gb|ABI70011.1| LSU ribosomal protein L3P [Shewanella frigidimarina NCIMB 400] Length = 212 Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 88/206 (42%), Positives = 124/206 (60%), Gaps = 1/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G IPVTV+ + +V +TL+ +GY A+QV G K Sbjct: 1 MAIGLIGRKVGMTRIFTEDGTSIPVTVIEIAGNRVTQVKTLETDGYRALQVTTGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++K G F+ V + L+E R+ + + + VG+ + F VDVTG + GKG Sbjct: 61 ITKAEAGHFAKGGVEAGRGLWEMRLADGEGEGIEVGAEINVDIFADTVKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF THG S++HRS+GS G Q PGRVFK KKM+G MG +VT +NL V Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAEQVTTQNLHV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWIL 205 V VD +R L+LV+G VPGA I+ Sbjct: 181 VRVDAERNLLLVRGAVPGATNGDLII 206 >gi|54293321|ref|YP_125736.1| 50S ribosomal protein L3 [Legionella pneumophila str. Lens] gi|81822454|sp|Q5WZL2|RL3_LEGPL RecName: Full=50S ribosomal protein L3 gi|53753153|emb|CAH14600.1| 50S ribosomal subunit protein L3 [Legionella pneumophila str. Lens] Length = 216 Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 91/198 (45%), Positives = 122/198 (61%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ EG +PV+V+ + +V +T +GY AVQ+ G K Sbjct: 1 MMIGLLGRKIGMTRVFTPEGVSVPVSVVEVHPNRVSQVKTAANDGYSAVQLTGGIKKSSK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKP+ G F+ + EFR+ +D P + FT GQ VDV+G+T GKGF Sbjct: 61 VSKPVAGHFAKAQIDAGDMQVEFRIDSEDAFTPGQVISVADVFTAGQYVDVSGLTKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNF A+HG S SHR GS G Q PGRVFK KKMAG MG R T+++LE+V Sbjct: 121 AGTVKRHNFRTQDASHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNARCTIQSLELV 180 Query: 181 SVDDKRGLILVKGCVPGA 198 VD +R L+L+KG +PGA Sbjct: 181 KVDSERNLLLIKGAIPGA 198 >gi|110802837|ref|YP_699663.1| 50S ribosomal protein L3 [Clostridium perfringens SM101] gi|123341525|sp|Q0SQE4|RL3_CLOPS RecName: Full=50S ribosomal protein L3 gi|110683338|gb|ABG86708.1| 50S ribosomal protein L3 [Clostridium perfringens SM101] Length = 209 Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT +++ GR IPVTV+ C VV +T++ +GY A+QVG GE + K Sbjct: 1 MKKAIIGKKVGMTQIFDENGRVIPVTVVEAGPCVVVQKKTVETDGYDAIQVGFGELREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP RG F+ VS ++ L EFR++ D VG F +G VDV+G++ GKGF Sbjct: 61 VNKPRRGHFAKAGVSLRRTLKEFRME-DVANYNVGDEIKVDTFEIGDKVDVSGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR N +HG S HR+ GS G DP R FKNK+M G MG TV NLEVV Sbjct: 120 QGTIKRWNASRGPMSHG-SKFHRAPGSMGAASDPSRTFKNKRMPGHMGAKNTTVLNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + ++ +IL+KG +PG K + I++R+S K+ Sbjct: 179 KIMPEKNIILIKGGIPGPNKGT-IVIRNSVKA 209 >gi|227502654|ref|ZP_03932703.1| 50S ribosomal protein L3 [Corynebacterium accolens ATCC 49725] gi|306835219|ref|ZP_07468253.1| 50S ribosomal protein L3 [Corynebacterium accolens ATCC 49726] gi|227076384|gb|EEI14347.1| 50S ribosomal protein L3 [Corynebacterium accolens ATCC 49725] gi|304568899|gb|EFM44430.1| 50S ribosomal protein L3 [Corynebacterium accolens ATCC 49726] Length = 218 Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 87/213 (40%), Positives = 122/213 (57%), Gaps = 2/213 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT V++ E R +PVTV+ C V RT + +GY A+Q+ GE + +K Sbjct: 8 GILGKKLGMTQVFDDENRVVPVTVVEAGPCVVTQIRTPETDGYSAIQIAFGEIDPRKANK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ + E R+ D VG F VDVTG T G G++GA Sbjct: 68 PESGHFKKAGVTPRRHVAEIRMD-DTSAYEVGQEVKVDIFEGITFVDVTGQTKGHGYAGA 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G A HG +HR G G PGRVFK K+MAGRMG +RVT +NL++ VD Sbjct: 127 MKRHGFQGQGAAHGNQAAHRRVGGIGGAATPGRVFKGKRMAGRMGHDRVTTQNLKIQKVD 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 + L+L+KG +PGA + + V+ + K + Sbjct: 187 VESNLLLIKGAIPGA-RGGLVTVKTAVKGGAHA 218 >gi|297537531|ref|YP_003673300.1| 50S ribosomal protein L3 [Methylotenera sp. 301] gi|297256878|gb|ADI28723.1| 50S ribosomal protein L3 [Methylotenera sp. 301] Length = 219 Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 86/213 (40%), Positives = 129/213 (60%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ +G IPVTVL + +V +T+ +GY +QV G + Sbjct: 1 MSLGLIGRKVGMTRVFTEDGASIPVTVLEVVPNRVTQIKTIASDGYTGLQVAYGTRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++ + G ++ + + EF V D G+ + F GQ+VDVTG+++GKG Sbjct: 61 INSALTGHYAKSGSAAGAGIHEFPVTSDVLANYTAGANITVDIFQAGQIVDVTGISLGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+GA+KRH+F RA+HG S SH GS G QDPGRVF K+M G +G +VT +NLE+ Sbjct: 121 FAGAIKRHHFKSNRASHGNSKSHNVPGSIGMAQDPGRVFPGKRMPGHLGATKVTTQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+L+KG +PG+K ++VR + K+ Sbjct: 181 VRVDAERNLLLIKGAIPGSKGGD-VVVRPAIKA 212 >gi|218294754|ref|ZP_03495608.1| ribosomal protein L3 [Thermus aquaticus Y51MC23] gi|218244662|gb|EED11186.1| ribosomal protein L3 [Thermus aquaticus Y51MC23] Length = 206 Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 97/210 (46%), Positives = 123/210 (58%), Gaps = 7/210 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ K+GMT +Y E R IPVTV+ C VV RT +K+GY AVQ+G K V++ Sbjct: 3 GILGTKVGMTRIYR-EDRAIPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLAQKPGRVNR 61 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 PM+G F+ V P + L E R D P G V + F G+ VDVTG + G+G +G Sbjct: 62 PMKGHFAKAGVQPVRILKEIR-----DFNPEGDVVTVEIFKPGERVDVTGTSKGRGTAGV 116 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR NF G +HG HR GS G R+ PGRV+K KKMAG G RVTV NLEVV V Sbjct: 117 MKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGHYGAERVTVVNLEVVDVI 176 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + L+LVKG VPG ++VR + K A Sbjct: 177 PEENLLLVKGAVPGP-NGGLVVVRQTKKVA 205 >gi|77918315|ref|YP_356130.1| 50S ribosomal protein L3 [Pelobacter carbinolicus DSM 2380] gi|109893533|sp|Q3A6P7|RL3_PELCD RecName: Full=50S ribosomal protein L3 gi|77544398|gb|ABA87960.1| LSU ribosomal protein L3P [Pelobacter carbinolicus DSM 2380] Length = 210 Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 91/211 (43%), Positives = 126/211 (59%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT V+ ++G+ IPVTV+ C V+ +T +K+GY A+Q+G G K ++ Sbjct: 1 MTKGILGKKLGMTQVFAVDGKCIPVTVVEAGPCVVLQKKTEEKDGYNALQLGFGAKKTQS 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP G F + L E + DD + +F G ++DVTG + GKGF Sbjct: 61 VNKPAMGHFKKSGKGAFEFLREVECENIDDHAVGDEITCDGFFATGDVIDVTGTSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G RA+HG S+ HR G G P RVFK KKMAG+MG RVT + LEVV Sbjct: 121 QGVIKRWNFAGGRASHG-SMFHRRPGGIGASAWPSRVFKGKKMAGQMGNKRVTTQGLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V ++ L+L+KG VPG N +L+R S K Sbjct: 180 DVRPEKSLVLIKGAVPGP-VNGLLLIRKSRK 209 >gi|46199630|ref|YP_005297.1| 50S ribosomal protein L3 [Thermus thermophilus HB27] gi|55981661|ref|YP_144958.1| 50S ribosomal protein L3 [Thermus thermophilus HB8] gi|1710559|sp|P52860|RL3_THETH RecName: Full=50S ribosomal protein L3 gi|62287202|sp|Q5SHN8|RL3_THET8 RecName: Full=50S ribosomal protein L3 gi|81830573|sp|Q72I04|RL3_THET2 RecName: Full=50S ribosomal protein L3 gi|116668236|pdb|2J01|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 2 Of 4). This File Contains The 50s Subunit From Molecule I. gi|116668297|pdb|2J03|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 4 Of 4). This File Contains The 50s Subunit From Molecule Ii. gi|119389737|pdb|2HGJ|E Chain E, Crystal Structure Of The 70s Thermus Thermophilus Ribosome Showing How The 16s 3'-End Mimicks Mrna E And P Codons. This Entry 2hgj Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 2hgi. gi|119389794|pdb|2HGQ|E Chain E, Crystal Structure Of The 70s Thermus Thermophilus Ribosome With Translocated And Rotated Shine-Dalgarno Duplex. This Entry 2hgq Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 2hgp. gi|119389850|pdb|2HGU|E Chain E, 70s T.Th. Ribosome Functional Complex With Mrna And E- And P-Site Trnas At 4.5a. This Entry 2hgu Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 2hgr. gi|149240888|pdb|1VSA|C Chain C, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals Functional Interactions And Rearrangements. This File, 1vsa, Contains The 50s Ribosome Subunit. 30s Ribosome Subunit Is In The File 2ow8 gi|157836523|pdb|2V47|E Chain E, Structure Of The Ribosome Recycling Factor Bound To The Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And Trna-Fmet (Part 2 Of 4). This File Contains The 50s Subunit For Molecule 1. gi|157836579|pdb|2V49|E Chain E, Structure Of The Ribosome Recycling Factor Bound To The Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And Trna-Fmet (Part 4 Of 4). This File Contains The 50s Subunit Of Molecule 2. gi|160285430|pdb|1VSP|C Chain C, Interactions And Dynamics Of The Shine-Dalgarno Helix In The 70s Ribosome. This File, 1vsp, Contains The 50s Ribosome Subunit. 30s Ribosome Subunit Is In The File 2qnh gi|209156521|pdb|3D5B|E Chain E, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|209156575|pdb|3D5D|E Chain E, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|211938857|pdb|2JL6|E Chain E, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 2 Of 4). This File Contains The 50s Subunit. gi|211938915|pdb|2JL8|E Chain E, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 4 Of 4). This File Contains The 50s Subunit. gi|218766798|pdb|3F1F|E Chain E, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|218766854|pdb|3F1H|E Chain E, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|226887438|pdb|2WDI|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A-Site Trna, Deacylated P-Site Trna, And E-Site Trna. This File Contains The 50s Subunit For Molecule I. gi|226887470|pdb|2WDJ|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A-Site Trna, Deacylated P-Site Trna, And E-Site Trna. This File Contains The 50s Subunit For Molecule Ii. gi|226887527|pdb|2WDL|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A- And P-Site Trnas, And E-Site Trna. This File Contains The 50s Subunit For Molecule I. gi|226887584|pdb|2WDN|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A- And P-Site Trnas, And E-Site Trna. This File Contains The 50s Subunit For Molecule Ii. gi|237823568|pdb|2WH2|E Chain E, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome gi|237823627|pdb|2WH4|E Chain E, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome gi|260100014|pdb|3HUX|E Chain E, Structure Of Ef-P Bound To The 70s Ribosome; This File Contains The 50s Subunit For Molecule I. gi|260100070|pdb|3HUZ|E Chain E, Structure Of Ef-P Bound To The 70s Ribosome; This File Contains The 50s Subunit For Molecule Ii. gi|261824523|pdb|2WRJ|E Chain E, The Structure Of The Ribosome With Elongation Factor G Trapped In The Post-Translocational State (Part 2 Of 4). gi|261824585|pdb|2WRL|E Chain E, The Structure Of The Ribosome With Elongation Factor G Trapped In The Post-Translocational State. (Part 4 Of 4). gi|261824648|pdb|2WRO|E Chain E, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu And Trna (Part 2 Of 4). gi|261824707|pdb|2WRR|E Chain E, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu And Trna (Part 4 Of 4). gi|281307195|pdb|3KIR|E Chain E, Structure Of Rele Nuclease Bound To The 70s Ribosome (Precleavage State; Part 2 Of 4) gi|281307253|pdb|3KIT|E Chain E, Structure Of Rele Nuclease Bound To The 70s Ribosome (Precleavage State; Part 4 Of 4) gi|281307311|pdb|3KIW|E Chain E, Structure Of Rele Nuclease Bound To The 70s Ribosome (Postcleavage State; Part 2 Of 4) gi|281307369|pdb|3KIY|E Chain E, Structure Of Rele Nuclease Bound To The 70s Ribosome (Postcleavage State; Part 4 Of 4) gi|288965633|pdb|3KNI|E Chain E, The Structures Of Viomycin Bound To The 70s Ribosome. This File Contains The 50s Subunit For Molecule I gi|288965665|pdb|3KNK|E Chain E, The Structures Of Viomycin Bound To The 70s Ribosome. This File Contains The 50s Subunit For Molecule Ii. gi|288965697|pdb|3KNM|E Chain E, The Structures Of Capreomycin Bound To The 70s Ribosome. Thi Contains The 50s Subunit For Molecule I. gi|288965729|pdb|3KNO|E Chain E, The Structures Of Capreomycin Bound To The 70s Ribosome. Thi Contains The 50s Subunit For Molecule Ii gi|294979477|pdb|3I8F|E Chain E, Elongation Complex Of The 70s Ribosome With Three Trnas And Entry 3i8f Contains 50s Ribosomal Subunit. The 30s Ribosoma Can Be Found In Pdb Entry 3i8g. Molecule B In The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f (50s). gi|294979557|pdb|3I8I|E Chain E, Elongation Complex Of The 70s Ribosome With Three Trnas And Entry 3i8i Contains 50s Ribosomal Subnit. The 30s Ribosomal Can Be Found In Pdb Entry 3i8h. Molecule A In The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g (30s). gi|294979615|pdb|3I9C|E Chain E, Initiation Complex Of 70s Ribosome With Two Trnas And Mrna. 3i9c Contains 50s Ribosomal Subunit Of Molecule B. The 30s Subunit Can Be Found In Pdb Entry 3i9b. Molecule A In The S Asymmetric Unit Is Deposited As 3i9d (30s) And 3i9e (50s) gi|294979669|pdb|3I9E|E Chain E, Initiation Complex Of 70s Ribosome With Two Trnas And Mrna. 3i9e Contains 50s Ribosomal Subunit Of Molecule A. The 30s Subunit Can Be Found In Pdb Entry 3i9d. Molecule B In The S Asymmetric Unit Is Deposited As 3i9b (30s) And 3i9c (50s) gi|295982114|pdb|2X9S|E Chain E, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release gi|295982173|pdb|2X9U|E Chain E, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release gi|300508632|pdb|3MRZ|D Chain D, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3mrz Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 3ms0. Molecule A In The Same Asymmetric Unit Is Deposited As 3mr8 (50s) And 3ms1 (30s). gi|300508687|pdb|3MS1|D Chain D, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3ms1 Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 3mr8. Molecule B In The Same Asymmetric Unit Is Deposited As 3mrz (50s) And 3ms0 (30s). gi|307568001|pdb|2XG0|E Chain E, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The 70s Ribosome (Part 2 Of 4) gi|307568059|pdb|2XG2|E Chain E, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The 70s Ribosome (Part 4 Of 4) gi|309320289|pdb|3OH5|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Chloramphenicol. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320319|pdb|3OH7|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Chloramphenicol. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320391|pdb|3OHJ|E Chain E, Structure Of The Thermus Thermophilus Ribosome Complexed With Erythromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320421|pdb|3OHK|E Chain E, Structure Of The Thermus Thermophilus Ribosome Complexed With Erythromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320472|pdb|3OHZ|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Azithromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320523|pdb|3OI1|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Azithromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320574|pdb|3OI3|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Telithromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320625|pdb|3OI5|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Telithromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|312207713|pdb|2XQE|E Chain E, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s Ribosome With A Gtp Analog gi|313754037|pdb|2XTG|E Chain E, Trna Tranlocation On The 70s Ribosome: The Pre- Translocational Translocation Intermediate Ti(Pre) gi|313754095|pdb|2XUX|E Chain E, Trna Tranlocation On The 70s Ribosome: The Post- Translocational Translocation Intermediate Ti(Post) gi|325533442|pdb|2Y0V|E Chain E, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533501|pdb|2Y0X|E Chain E, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533560|pdb|2Y0Z|E Chain E, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533619|pdb|2Y11|E Chain E, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533678|pdb|2Y13|E Chain E, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533737|pdb|2Y15|E Chain E, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533796|pdb|2Y17|E Chain E, Ef-Tu Complex 3 gi|325533855|pdb|2Y19|E Chain E, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|1143612|emb|CAA86408.1| ribosomal protein L3 [Thermus thermophilus] gi|46197256|gb|AAS81670.1| LSU ribosomal protein L3P [Thermus thermophilus HB27] gi|55773074|dbj|BAD71515.1| 50S ribosomal protein L3 [Thermus thermophilus HB8] Length = 206 Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 93/210 (44%), Positives = 125/210 (59%), Gaps = 7/210 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ K+GMT ++ + R +PVTV+ C VV RT +K+GY AVQ+G K V++ Sbjct: 3 GILGVKVGMTRIFR-DDRAVPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLPQNPKRVNR 61 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ V P + L E R D P G + F G+ VDVTG + G+GF+G Sbjct: 62 PLKGHFAKAGVEPVRILREIR-----DFNPEGDTVTVEIFKPGERVDVTGTSKGRGFAGV 116 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR NF G +HG HR GS G R+ PGRV+K KKMAG G RVTV NLEVV V Sbjct: 117 MKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGHYGAERVTVMNLEVVDVI 176 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + L+LVKG VPG ++VR++ K+A Sbjct: 177 PEENLLLVKGAVPGP-NGGLVIVRETKKAA 205 >gi|15644248|ref|NP_229300.1| 50S ribosomal protein L3 [Thermotoga maritima MSB8] gi|148270422|ref|YP_001244882.1| 50S ribosomal protein L3 [Thermotoga petrophila RKU-1] gi|170289183|ref|YP_001739421.1| ribosomal protein L3 [Thermotoga sp. RQ2] gi|281412729|ref|YP_003346808.1| 50S ribosomal protein L3 [Thermotoga naphthophila RKU-10] gi|585886|sp|P38515|RL3_THEMA RecName: Full=50S ribosomal protein L3 gi|166234605|sp|A5IM83|RL3_THEP1 RecName: Full=50S ribosomal protein L3 gi|226730584|sp|B1LBP0|RL3_THESQ RecName: Full=50S ribosomal protein L3 gi|4982064|gb|AAD36566.1|AE001798_31 ribosomal protein L3 [Thermotoga maritima MSB8] gi|437923|emb|CAA79777.1| ribosomal protein L3 [Thermotoga maritima] gi|147735966|gb|ABQ47306.1| LSU ribosomal protein L3P [Thermotoga petrophila RKU-1] gi|170176686|gb|ACB09738.1| ribosomal protein L3 [Thermotoga sp. RQ2] gi|281373832|gb|ADA67394.1| 50S ribosomal protein L3 [Thermotoga naphthophila RKU-10] Length = 207 Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 93/205 (45%), Positives = 127/205 (61%), Gaps = 6/205 (2%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RK+GMT V+ + +PVTV+ C VV +T++K+GY AVQ+G K K V+KP Sbjct: 4 IIGRKIGMTRVF-VGNDSVPVTVIKAGPCVVVQKKTVEKDGYNAVQLGF--EKAKKVNKP 60 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + G F V P K L EFRV+ D+ P G V F G+ VDVTG T G+GF+GAM Sbjct: 61 LAGHFKKFGVEPMKILREFRVENPDEYEP-GQVIKVDVFEKGEYVDVTGWTKGRGFAGAM 119 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR F G +HG S HR GS G +P +++K KKM GR G RVTV+NL+VV +D Sbjct: 120 KRWGFSGGPKSHG-SKFHRELGSVGQHTEPAKIWKGKKMPGRYGNERVTVRNLQVVDIDP 178 Query: 185 KRGLILVKGCVPGAKKNSWILVRDS 209 + L++VKG VPGA + +L+R + Sbjct: 179 ENDLLVVKGGVPGA-RGGLVLIRSA 202 >gi|284992874|ref|YP_003411428.1| 50S ribosomal protein L3 [Geodermatophilus obscurus DSM 43160] gi|284066119|gb|ADB77057.1| 50S ribosomal protein L3 [Geodermatophilus obscurus DSM 43160] Length = 221 Score = 161 bits (408), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 93/208 (44%), Positives = 120/208 (57%), Gaps = 2/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ C V RT + +GY AVQ+G GE + V+K Sbjct: 7 GLLGEKLGMTQVFDENNRIVPVTVVKAGPCVVTQVRTPEVDGYSAVQLGFGEIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V+P++ L E R KD VG + F VDV G + GKG +G Sbjct: 67 PEGGHFTKAGVTPRRHLVELRT-KDASEYTVGQELTAEVFDGVAKVDVIGTSKGKGTAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GL A HG HRS GS G PGRVFK +MAGRMG + T +L V VD Sbjct: 126 MKRHGFKGLGAAHGTQRKHRSPGSIGGASTPGRVFKGLRMAGRMGAVKTTTLSLTVHKVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 +RGL+L+KG +PG K +LVR + K Sbjct: 186 AERGLLLIKGAIPGP-KGGLVLVRSAVK 212 >gi|238921442|ref|YP_002934957.1| hypothetical protein NT01EI_3594 [Edwardsiella ictaluri 93-146] gi|238871011|gb|ACR70722.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 199 Score = 161 bits (408), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 88/194 (45%), Positives = 121/194 (62%), Gaps = 1/194 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++ +G IPVTV+ ++ +V + LD +GY A+QV G K V+KP G F+ Sbjct: 1 MTRIFTEDGVSIPVTVIEIEANRVTQVKDLDNDGYRAIQVTTGSKKANRVTKPEAGHFAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 V + L EFR+ + ++ +G S F + VDVTG++ GKGF+G +KR NF Sbjct: 61 AGVEAGRVLREFRLSEGEEFT-IGQNISVEIFADVKKVDVTGISKGKGFAGTVKRWNFRT 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD +R L+LV Sbjct: 120 QDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVDAERNLLLV 179 Query: 192 KGCVPGAKKNSWIL 205 KG VPGA I+ Sbjct: 180 KGAVPGATGGDLIV 193 >gi|224510783|pdb|3FIN|E Chain E, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas And Ef-Tu.Gdp.Kirromycin Ternary Complex, Fitted To A 6.4 A Cryo-Em Map. This File Contains The 50s Subunit Length = 205 Score = 161 bits (408), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 93/210 (44%), Positives = 125/210 (59%), Gaps = 7/210 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ K+GMT ++ + R +PVTV+ C VV RT +K+GY AVQ+G K V++ Sbjct: 3 GILGVKVGMTRIFR-DDRAVPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLPQNPKRVNR 61 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ V P + L E R D P G + F G+ VDVTG + G+GF+G Sbjct: 62 PLKGHFAKAGVEPVRILREIR-----DFNPEGDTVTVEIFKPGERVDVTGTSKGRGFAGV 116 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR NF G +HG HR GS G R+ PGRV+K KKMAG G RVTV NLEVV V Sbjct: 117 MKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGHYGAERVTVMNLEVVDVI 176 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + L+LVKG VPG ++VR++ K+A Sbjct: 177 PEENLLLVKGAVPGP-NGGLVIVRETKKAA 205 >gi|89893217|ref|YP_516704.1| 50S ribosomal protein L3 [Desulfitobacterium hafniense Y51] gi|123397902|sp|Q250N2|RL3_DESHY RecName: Full=50S ribosomal protein L3 gi|89332665|dbj|BAE82260.1| 50S ribosomal protein L3 [Desulfitobacterium hafniense Y51] Length = 212 Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 90/202 (44%), Positives = 123/202 (60%), Gaps = 3/202 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V+ EG IPVTV+ C V+ +T +GY A+QVG G + + +K Sbjct: 7 GILGKKVGMTQVFTEEGHLIPVTVVEAGPCYVIQKKTKATDGYNAIQVGFGALRERLANK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G + +V P + + EFRV D + +G V + F G VDV G++ GKGF+G Sbjct: 67 PQKGHVAKASVKPMRYIREFRVD-DVEAYEIGQVITAELFAAGDAVDVVGISKGKGFAGM 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KRH HG S HR GS G + P RVFK + + GRMGG RVTV+NL+VV VD Sbjct: 126 IKRHGASRGPMKHG-SKYHRRTGSLGAK-GPARVFKGRNLPGRMGGERVTVQNLKVVRVD 183 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 + +ILVKG VPGAKK+ IL Sbjct: 184 ADKNMILVKGAVPGAKKSLLIL 205 >gi|118473190|ref|YP_885819.1| 50S ribosomal protein L3 [Mycobacterium smegmatis str. MC2 155] gi|166233163|sp|A0QSD1|RL3_MYCS2 RecName: Full=50S ribosomal protein L3 gi|118174477|gb|ABK75373.1| ribosomal protein L3 [Mycobacterium smegmatis str. MC2 155] Length = 217 Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 89/214 (41%), Positives = 128/214 (59%), Gaps = 7/214 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ + +PVTV+ V RT +++GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTTERDGYSAVQLAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL----LPVGSVFSPSYFTVGQLVDVTGMTIG 117 KP+ G F++ V+P++ + E R+ DD+ VG + F+ G VDVTG + G Sbjct: 63 IKPVAGQFAAAGVNPRRHVAELRL--DDEAAVAEYEVGQELTAEIFSDGAYVDVTGTSKG 120 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF+G MKRH F G A HG HR GS G PGRVFK +M+GRMG +RVT +NL Sbjct: 121 KGFAGTMKRHGFRGQGAAHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGNDRVTTQNL 180 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +V VD + G++L+KG +PG + ++VR + K Sbjct: 181 KVHKVDAENGVLLIKGAIPG-RNGGLVVVRSAIK 213 >gi|289614454|emb|CBI58738.1| unnamed protein product [Sordaria macrospora] Length = 365 Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 96/214 (44%), Positives = 127/214 (59%), Gaps = 17/214 (7%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+GV+A K GMT G RIP TVL LD Q+V ++T KNGY AVQ+G EAK Sbjct: 102 LRTGVLAVKKGMTVFMGKTGARIPCTVLQLDRVQIVANKTRAKNGYWAVQLGYYEAK--- 158 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + PK+ L EF+V+ D LLPVG P +F VGQ VDV G+T G GF Sbjct: 159 ------------GIPPKQTLAEFKVRNQDGLLPVGVQLFPDWFHVGQRVDVRGITRGMGF 206 Query: 121 SGAMKRHNFGGLRATHGVSISHRS-HGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 +G MK+H F G A+HG S +HR+ G + RV KKM GRMG + TV+NL V Sbjct: 207 AGGMKKHGFSGQEASHGNSKNHRTIGSVGGSQGSGSRVLPGKKMPGRMGAQQHTVQNLPV 266 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + VD++ G+++VKG V G K + + V+D+ K A Sbjct: 267 LMVDNELGIVVVKGAVAG-HKGAVVKVQDAVKKA 299 >gi|33519658|ref|NP_878490.1| 50S ribosomal subunit protein L3 [Candidatus Blochmannia floridanus] gi|42559603|sp|Q7VQE8|RL3_BLOFL RecName: Full=50S ribosomal protein L3 gi|33517321|emb|CAD83706.1| 50S ribosomal subunit protein L3 [Candidatus Blochmannia floridanus] Length = 219 Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 86/195 (44%), Positives = 123/195 (63%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V RKLGMT + N EG I VT++ + V + +K+GY AVQV G + K ++ Sbjct: 2 DGLVGRKLGMTRIINEEGIMIAVTMIEILPHYVTQVKNKEKDGYCAVQVTTGNTRDKCLN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G + ++ K L+EFR+ + L+ VG +F+ VDVTG++ GKGF+G Sbjct: 62 KPKLGHLKKLGINYGKGLWEFRLNDSNRLISVGDIFTLKVLKCINKVDVTGISKGKGFAG 121 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF A+HG S+SHR+ GS G Q PG+VFK KKMAG +G + T++NL V+++ Sbjct: 122 AVKRWNFRTQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGHLGYEKATIQNLAVINI 181 Query: 183 DDKRGLILVKGCVPG 197 D K L+LVKG +PG Sbjct: 182 DIKNNLLLVKGAIPG 196 >gi|325104868|ref|YP_004274522.1| LSU ribosomal protein L3P [Pedobacter saltans DSM 12145] gi|324973716|gb|ADY52700.1| LSU ribosomal protein L3P [Pedobacter saltans DSM 12145] Length = 205 Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 84/206 (40%), Positives = 127/206 (61%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ EG+ IP TV+ C V +T++ +GY AVQ+ E K KN + Sbjct: 2 SGIIGKKVGMTSIFDAEGKNIPCTVIEAGPCVVTQVKTVETDGYAAVQLAYDEKKEKNTT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 ++G F+ +PK+K+ EF+ + + L G V + F G VDV G + GKGF G Sbjct: 62 AALKGHFAKAGTAPKRKMVEFKYFEVEKTL--GEVVDVTLFEEGDYVDVVGTSKGKGFQG 119 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG+ THG R+ GS G P RVFK +MAGR GG+RV ++NL++V Sbjct: 120 VVKRHGFGGVGMQTHGQHNRMRAPGSLGASSFPSRVFKGMRMAGRTGGSRVKIQNLQIVK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L++V G +PGA K S++L+ Sbjct: 180 VFAEQNLLVVSGSIPGA-KGSYVLIE 204 >gi|300868356|ref|ZP_07112982.1| 50S ribosomal protein L3 [Oscillatoria sp. PCC 6506] gi|300333649|emb|CBN58170.1| 50S ribosomal protein L3 [Oscillatoria sp. PCC 6506] Length = 211 Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 87/197 (44%), Positives = 120/197 (60%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT V++ +GR IPVTV+ C V +T +GY A+QVG G+ K K Sbjct: 1 MSVGILGTKLGMTQVFDEQGRAIPVTVIQAGPCTVTQIKTKQTDGYAAIQVGYGDVKAKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP G + +P + L E+R++ D +G FT GQ+VDV G +IGKGF Sbjct: 61 LNKPELGHLAKSGATPVRHLQEYRLE-DIGEFQLGQQVKADLFTPGQIVDVIGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRHNF HG S +HR GS G PGRV+ K+MAGR+G ++TV+ L V+ Sbjct: 120 AGFQKRHNFKRGPMAHG-SKNHRQPGSIGPGTTPGRVYPGKRMAGRLGNVQITVRKLTVL 178 Query: 181 SVDDKRGLILVKGCVPG 197 VD +R L+L+KG VPG Sbjct: 179 RVDTERNLLLIKGAVPG 195 >gi|266620263|ref|ZP_06113198.1| 50S ribosomal protein L3 [Clostridium hathewayi DSM 13479] gi|288868166|gb|EFD00465.1| 50S ribosomal protein L3 [Clostridium hathewayi DSM 13479] Length = 211 Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 93/214 (43%), Positives = 128/214 (59%), Gaps = 3/214 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++A K+GMT ++N +G PVTVL C V +T + +GY AVQVG + + K Sbjct: 1 MKKGILATKVGMTQIFNEDGVLTPVTVLLAGPCVVTQVKTAENDGYDAVQVGFVDKRAKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKP++G F VS K+ + EF+ + + V F G +D T ++ GKGF Sbjct: 61 VSKPVKGHFDKAGVSYKRYVREFKFENASEY-SVKDEIKADIFAAGDKIDATAISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G DP +VFK KKM G+MG RVT++NLE+V Sbjct: 120 QGAIKRHGQSRGPMAHG-SKFHRHAGSNGSCSDPSKVFKGKKMPGQMGNKRVTIQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 VD + LILVKG VPG KK S + ++++ K+AV Sbjct: 179 KVDAENNLILVKGAVPGPKK-SLVTIKETVKAAV 211 >gi|296119209|ref|ZP_06837779.1| 50S ribosomal protein L3 [Corynebacterium ammoniagenes DSM 20306] gi|295967835|gb|EFG81090.1| 50S ribosomal protein L3 [Corynebacterium ammoniagenes DSM 20306] Length = 217 Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 84/213 (39%), Positives = 123/213 (57%), Gaps = 2/213 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT V++ E R +PVTV+ C V RT++ +GY A+Q+ GE + +K Sbjct: 7 GILGKKLGMTQVFDEENRVVPVTVVEAGPCVVTQIRTVENDGYNAIQIAYGEIDPRKANK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ + E R+ D VG + F VDVTG + G G++GA Sbjct: 67 PASGHFKKAGVTPRRHVAEIRMD-DVTAYEVGQDVTVEVFEGITFVDVTGTSKGHGYAGA 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G A HG +HR G G PGRVFK K+MAGRMG +RVT +NL++ +D Sbjct: 126 MKRHGFAGQGAAHGNQAAHRRVGGIGGAATPGRVFKGKRMAGRMGSDRVTTQNLKIQKID 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 + L+L+KG +PG + + V+ + K + Sbjct: 186 AESNLLLIKGAIPGV-RGGLVTVKTAVKGGAHA 217 >gi|295698649|ref|YP_003603304.1| ribosomal protein L3 [Candidatus Riesia pediculicola USDA] gi|291157291|gb|ADD79736.1| ribosomal protein L3 [Candidatus Riesia pediculicola USDA] Length = 208 Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 85/202 (42%), Positives = 123/202 (60%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ G IP+TV+ ++ +V L KNGY +VQV +G K K + Sbjct: 3 GLIGKKIGMTRIFMKNGMAIPITVIQVEENRVTQVGILKKNGYRSVQVTSGIKKHKFLKS 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 GFF + V P K L EF+ ++ +G S+ + + +D++ + GKGF G Sbjct: 63 SEIGFFKKIVVDPGKILKEFKTNATNENYHIGQKIHLSFLSKFKRIDISSFSKGKGFCGT 122 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF A+HG S+SHR GS G Q PGRVFK KKMAG MG +VT+K LE++ +D Sbjct: 123 IKRWNFKAQDASHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGHMGNKKVTMKKLEIIQID 182 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 +K+GLILVKG VPG + I+ Sbjct: 183 EKKGLILVKGSVPGGTNCNLII 204 >gi|89902555|ref|YP_525026.1| 50S ribosomal protein L3 [Rhodoferax ferrireducens T118] gi|109893546|sp|Q21RV8|RL3_RHOFD RecName: Full=50S ribosomal protein L3 gi|89347292|gb|ABD71495.1| LSU ribosomal protein L3P [Rhodoferax ferrireducens T118] Length = 228 Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 90/219 (41%), Positives = 130/219 (59%), Gaps = 13/219 (5%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ EG IPVTV+ + N +V +T + +GY+A+QV G K V+K Sbjct: 8 GLLGRKVGMMRLFTDEGDSIPVTVVDVSNNRVTQVKTQENDGYVALQVTFGARKASRVTK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKD-------DDLLPVGSVFSPSYFTVGQLVDVTGMTI 116 P G + V + + EFR+ D +PV +VF+ VGQ VDV G TI Sbjct: 68 PAAGHLAKAGVEAGEIIREFRLTADVAAQYKAGATVPVTAVFA-----VGQKVDVQGTTI 122 Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 GKGF+G +KRH+ RA+HG S SH GS G QDPGRVF K+M G +G + VT +N Sbjct: 123 GKGFAGTIKRHHMKSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDDTVTTQN 182 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 L+V+ +D+ R L+++KG VPG+ ++ VR + K N Sbjct: 183 LDVIRIDEARQLLMIKGAVPGS-AGGFVTVRPAVKVKAN 220 >gi|225849548|ref|YP_002729713.1| 50S ribosomal protein L3 [Sulfurihydrogenibium azorense Az-Fu1] gi|225644163|gb|ACN99213.1| 50S ribosomal protein L3 [Sulfurihydrogenibium azorense Az-Fu1] Length = 228 Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 86/209 (41%), Positives = 126/209 (60%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ + G+ +PVTV+ C V R+ DK+GY AV + GE K KN Sbjct: 1 MPKGIIGKKIGMTRIF-VNGKAVPVTVVQAGPCYVTYLRSKDKDGYEAVALAFGERKEKN 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 KP+ F N+ P K + EF +++ + L + F G LVDVTG + G+GF Sbjct: 60 TPKPLLAIFKKANIKPAKVIKEFPLKEGETLELGQEIRVEQVFEKGDLVDVTGKSKGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 + MKR +F G +HG HR+ GS GCR +PGRV+K K+MAG G VTV LEVV Sbjct: 120 TSVMKRWDFAGFPKSHGHRY-HRAVGSIGCRTEPGRVWKTKRMAGHYGNETVTVLGLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 + ++ +IL+KG +PGA NS + +++S Sbjct: 179 DIIPEKNVILLKGSIPGA-PNSTVFLKNS 206 >gi|237739366|ref|ZP_04569847.1| LSU ribosomal protein L3P [Fusobacterium sp. 2_1_31] gi|229422974|gb|EEO38021.1| LSU ribosomal protein L3P [Fusobacterium sp. 2_1_31] Length = 211 Score = 161 bits (407), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT ++ +G+ +PVTV+ V+ +T +K+GY+A+Q+G E K KN + Sbjct: 2 SGILGKKIGMTQIFE-DGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ V P++ + E V+ + +G VD+TG + GKG SG Sbjct: 61 KPLMGIFNKAGVKPQRFVRELAVESVEGY-ELGQEIKVDVLAEVGYVDITGTSKGKGTSG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGG RA+HGVS +HR GS G PG+V K K+MAG+ G VTV+NL+VV V Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D + L+L+KG VPGA KNS+++++ + K + Sbjct: 180 DVEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210 >gi|300782608|ref|YP_003762899.1| 50S ribosomal protein L3 [Amycolatopsis mediterranei U32] gi|299792122|gb|ADJ42497.1| large subunit ribosomal protein L3 [Amycolatopsis mediterranei U32] Length = 218 Score = 160 bits (406), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 92/208 (44%), Positives = 120/208 (57%), Gaps = 2/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ + R +PVTV+ V RT DK+GY AVQ+ G + V+K Sbjct: 8 GILGTKLGMTQVFDEQNRVVPVTVVKAGPNVVTQVRTQDKDGYTAVQLAFGAVDPRKVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ L E R D + VG + F G VDVTG + GKG++G Sbjct: 68 PRTGHFDKAGVTPRRFLAELRT-TDAETYEVGQEITAEVFAAGVEVDVTGTSKGKGYAGV 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G A+HG HR GS G PGRVFK +MAGRMG +RVT +NL V +V Sbjct: 127 MKRHGFKGQGASHGAQAVHRKPGSIGGCATPGRVFKGLRMAGRMGNDRVTTQNLTVHAVR 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 GL+L+KG VPG K + VR + K Sbjct: 187 ADDGLLLIKGAVPGP-KGGVLFVRSAAK 213 >gi|169335629|ref|ZP_02862822.1| hypothetical protein ANASTE_02049 [Anaerofustis stercorihominis DSM 17244] gi|169258367|gb|EDS72333.1| hypothetical protein ANASTE_02049 [Anaerofustis stercorihominis DSM 17244] Length = 216 Score = 160 bits (406), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 91/213 (42%), Positives = 127/213 (59%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A+K+GMT V++ G IPVTVL C V+ +T++K+GY AVQ+G GE KN Sbjct: 6 MKKAIMAKKVGMTQVFSETGEVIPVTVLQAGPCYVLQVKTVEKDGYEAVQLGYGEINEKN 65 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F V P +K+ EFR D G+ F G +D+TG++ GKGF Sbjct: 66 VNKPLKGHFEKAGVKPVRKIKEFRFD-DCSGYETGNEIKADVFEAGDKIDITGVSKGKGF 124 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S SHR G+ PGRV K K M G MG +VTV+NL VV Sbjct: 125 QGAIKRHGQSRGPMGHG-SKSHRVVGAMSGASYPGRVMKGKNMPGHMGSEKVTVQNLTVV 183 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D++ ++LVKG VPG+ S + + DS K++ Sbjct: 184 KADNENNMLLVKGAVPGS-NGSIVTITDSIKAS 215 >gi|262066304|ref|ZP_06025916.1| 50S ribosomal protein L3 [Fusobacterium periodonticum ATCC 33693] gi|294783642|ref|ZP_06748966.1| 50S ribosomal protein L3 [Fusobacterium sp. 1_1_41FAA] gi|291379999|gb|EFE87517.1| 50S ribosomal protein L3 [Fusobacterium periodonticum ATCC 33693] gi|294480520|gb|EFG28297.1| 50S ribosomal protein L3 [Fusobacterium sp. 1_1_41FAA] Length = 211 Score = 160 bits (406), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT ++ +G+ +PVTV+ V+ +T +K+GY+A+Q+G E K KN + Sbjct: 2 SGILGKKIGMTQIFE-DGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ V P++ + E V+ + +G VD+TG + GKG SG Sbjct: 61 KPLMGIFNKAGVKPQRFVRELAVETVEGY-ELGQEIKVDVLAEVGYVDITGTSKGKGTSG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGG RA+HGVS +HR GS G PG+V K K+MAG+ G VTV+NL+VV V Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D + L+L+KG VPGA KNS+++++ + K + Sbjct: 180 DVEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210 >gi|225175674|ref|ZP_03729668.1| ribosomal protein L3 [Dethiobacter alkaliphilus AHT 1] gi|225169003|gb|EEG77803.1| ribosomal protein L3 [Dethiobacter alkaliphilus AHT 1] Length = 213 Score = 160 bits (406), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 93/217 (42%), Positives = 129/217 (59%), Gaps = 4/217 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT V+ EG+ IPVTV+ C VV +T + +GY AVQ G G K K+ Sbjct: 1 MQKAILGKKVGMTQVFTEEGKVIPVTVIEAGPCVVVQKKTKEVDGYDAVQFGYGAIKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP+ G F PKK + E R++ D VG F G VD++G+T GKGF Sbjct: 61 VTKPLAGHFKKAEQEPKKYIREMRLE-DTASYEVGQEVKADVFAEGDWVDISGVTRGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GA+KRH FG THG S HR GS G D RVFK +K+ GRMGG +VTV+ L+VV Sbjct: 120 AGAIKRHGFGRGPTTHG-SHYHRGPGSLGA-VDAARVFKGRKLPGRMGGVKVTVQKLKVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 VD R L+L+ G VPG + + ++++ K+ K Sbjct: 178 KVDTDRNLLLIHGAVPGP-RGGLVTLKNTVKNVKEAK 213 >gi|224534796|ref|ZP_03675368.1| ribosomal protein L3 [Borrelia spielmanii A14S] gi|224514044|gb|EEF84366.1| ribosomal protein L3 [Borrelia spielmanii A14S] Length = 206 Score = 160 bits (406), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 92/209 (44%), Positives = 130/209 (62%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ G +PVT++ ++ +T+D++GY A+ G+ + K VSK Sbjct: 3 GLIGKKVGMTQIFQKNGIVVPVTIIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKVSK 62 Query: 64 PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + S+ ++ PKK + E K D G F + VDVTG T GKGF G Sbjct: 63 PIKGQYKSLKDIEPKKYVIEL---KGLDGYDAGDEIKVDVFKSVRYVDVTGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G A+HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV + Sbjct: 120 AMKRHNFSGGPASHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D+++ ILVKG VPGA K S+++V+ S K Sbjct: 179 DEEKRAILVKGAVPGA-KGSFVVVKKSKK 206 >gi|311740077|ref|ZP_07713911.1| 50S ribosomal protein L3 [Corynebacterium pseudogenitalium ATCC 33035] gi|311305150|gb|EFQ81219.1| 50S ribosomal protein L3 [Corynebacterium pseudogenitalium ATCC 33035] Length = 218 Score = 160 bits (406), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 85/213 (39%), Positives = 123/213 (57%), Gaps = 2/213 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT V++ + R +PVTV+ C V RT + +GY A+Q+ GE + +K Sbjct: 8 GILGKKLGMTQVFDEDNRVVPVTVVEAGPCVVTQIRTPETDGYSAIQIAFGEIDPRKANK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+P++ + E R+ D VG F VDVTG T G G++GA Sbjct: 68 PVGGHFKKAGVTPRRHVAEIRMD-DTSAYEVGQEVKVDIFEGITFVDVTGKTKGHGYAGA 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G A HG +HR G G PGRVFK K+MAGRMG +RVT +NL++ +D Sbjct: 127 MKRHGFAGQGAAHGNQAAHRRVGGIGGAATPGRVFKGKRMAGRMGHDRVTTQNLKIQKID 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 + L+L+KG +PGA + + V+ + K + Sbjct: 187 AESNLLLIKGAIPGA-RGGLVTVKTAVKGGAHA 218 >gi|118616571|ref|YP_904903.1| 50S ribosomal protein L3 [Mycobacterium ulcerans Agy99] gi|166233167|sp|A0PM63|RL3_MYCUA RecName: Full=50S ribosomal protein L3 gi|118568681|gb|ABL03432.1| 50S ribosomal protein L3 RplC [Mycobacterium ulcerans Agy99] Length = 217 Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 88/212 (41%), Positives = 126/212 (59%), Gaps = 3/212 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ + +PVTV+ V RT +++GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP+ G +++ V+P++ L E R+ + + VG + F G VDVTG + GKG Sbjct: 63 NKPVTGQYTAAGVNPRRHLAELRLDDAEAVTEYEVGQELTAEIFADGSYVDVTGTSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV+NL V Sbjct: 123 FAGTMKRHGFSGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD ++ ++L+KG VPG + + VR + K Sbjct: 183 HKVDAEQSVLLIKGAVPG-RTGGLVTVRSAIK 213 >gi|255326842|ref|ZP_05367918.1| 50S ribosomal protein L3 [Rothia mucilaginosa ATCC 25296] gi|283457543|ref|YP_003362126.1| 50S ribosomal protein L3 [Rothia mucilaginosa DY-18] gi|255296059|gb|EET75400.1| 50S ribosomal protein L3 [Rothia mucilaginosa ATCC 25296] gi|283133541|dbj|BAI64306.1| ribosomal protein L3 [Rothia mucilaginosa DY-18] Length = 218 Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 88/210 (41%), Positives = 122/210 (58%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ +G+ +PVTV+ D+ V R + +GY AVQ+G G + V+K Sbjct: 11 GLLGTKLGMTQVWDEDGKFVPVTVVKADSNVVTQIRNQETDGYEAVQIGFGAIDSRKVTK 70 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+P++ + E R D +G + F GQ VDV G T GKGF+G Sbjct: 71 PLAGHFEKAGVTPRRHIVELRTA-DASEYSLGQELTVELFEAGQKVDVVGKTKGKGFAGV 129 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G+ A+HG +HR GS G P RVFK +MAGRMG R T NL + VD Sbjct: 130 MKRHGFKGVGASHGQHKNHRKPGSIGGASYPARVFKGMRMAGRMGAARHTTLNLTIQGVD 189 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + ++L+KG +PG K +LVR + K A Sbjct: 190 AENNVLLIKGAIPGP-KGGVVLVRTAVKGA 218 >gi|326332191|ref|ZP_08198471.1| 50S ribosomal protein L3 [Nocardioidaceae bacterium Broad-1] gi|325949897|gb|EGD41957.1| 50S ribosomal protein L3 [Nocardioidaceae bacterium Broad-1] Length = 218 Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 89/208 (42%), Positives = 123/208 (59%), Gaps = 2/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT +++ +PVTV+ + V RT + +GY AVQ+G GE + V+K Sbjct: 9 GLLGTKLGMTQLWDENNVVVPVTVIAANTNVVTQVRTPEVDGYNAVQIGYGEIDGRKVNK 68 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F +P++ L E R D G S F VG+ +DVTG + GKGF+G Sbjct: 69 PGAGQFEKAGTTPRRHLAEIRTA-DAASYSAGQELSVDTFAVGEEIDVTGTSKGKGFAGT 127 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G+ A+HG +HR GS G PGRVFK +MAG MG + VT +NL V +VD Sbjct: 128 MKRHGFAGVSASHGAHRNHRKPGSIGACATPGRVFKGVRMAGHMGTDTVTTQNLTVHAVD 187 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 ++GLILVKG +PG K +++R + K Sbjct: 188 TEKGLILVKGAIPG-PKGGLVVLRSAAK 214 >gi|325287048|ref|YP_004262838.1| 50S ribosomal protein L3 [Cellulophaga lytica DSM 7489] gi|324322502|gb|ADY29967.1| 50S ribosomal protein L3 [Cellulophaga lytica DSM 7489] Length = 205 Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 90/206 (43%), Positives = 123/206 (59%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ RK+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G + K + Sbjct: 2 SGLIGRKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTEEVDGYNALQLGFDDKAEKRAN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F SPKKK+ EF Q + +G F G+ VDV G + GKGF G Sbjct: 62 KAQMGHFKKAGTSPKKKVVEF--QDFEGEYKLGDTVGVDQFVEGEFVDVVGTSKGKGFQG 119 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG+ +ATHG R+ GS G P RVFK KMAGRMGG RVTV+NL V Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGRMGGERVTVQNLRVYK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L++VKGCVPG KN+++ ++ Sbjct: 180 VVPEKNLLVVKGCVPG-HKNAYVTIQ 204 >gi|169830436|ref|YP_001716418.1| ribosomal protein L3 [Candidatus Desulforudis audaxviator MP104C] gi|212288256|sp|B1I1I8|RL3_DESAP RecName: Full=50S ribosomal protein L3 gi|169637280|gb|ACA58786.1| ribosomal protein L3 [Candidatus Desulforudis audaxviator MP104C] Length = 213 Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 91/211 (43%), Positives = 126/211 (59%), Gaps = 4/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RKLGM+ + EG +PVT++ C VV +T D +GY AVQ+G E K Sbjct: 4 MAKGILGRKLGMSRFFTAEGVAVPVTLIEAGPCTVVQKKTPDTDGYSAVQLGFMEQPAKR 63 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++P++G F V P + L E RV D VG V F VG++VDV G + GKGF Sbjct: 64 VNRPLKGHFGRAGVKPSRFLRELRVADAAD-YEVGQVLKADLFDVGEIVDVVGTSKGKGF 122 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH F HG S HR G+ + P RVFK +K+ GR+GG RVTV+NLE+V Sbjct: 123 AGGIKRHGFHRGPMGHG-SKYHRRPGALAAK-GPARVFKGRKLPGRLGGVRVTVQNLEIV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L+ V+G VPG + S ++V+ + K Sbjct: 181 KVDPERNLLAVRGAVPGI-RGSLVVVKSAVK 210 >gi|255282605|ref|ZP_05347160.1| 50S ribosomal protein L3 [Bryantella formatexigens DSM 14469] gi|255266898|gb|EET60103.1| 50S ribosomal protein L3 [Bryantella formatexigens DSM 14469] Length = 211 Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 127/212 (59%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G PVTVL C V +T++ +GY AVQVG + + K Sbjct: 1 MKKAILATKVGMTQIFNDDGVLTPVTVLQAGPCVVTQIKTVENDGYSAVQVGYVDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F VS K+ L EF++ ++ V F G +D T ++ GKGF Sbjct: 61 VNKPLKGHFDKAGVSYKRYLREFKLDNAEEY-QVAQEIKADIFAAGDKIDATAISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G DP +VF+ KKMAG MG RVT++NLEVV Sbjct: 120 QGAIKRHGLHRGPMAHG-SKYHRHAGSNGACSDPSKVFRGKKMAGHMGHKRVTIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + L+LVKG VPG KK S + ++++ K+ Sbjct: 179 RVDAENNLLLVKGAVPGPKK-SLVSIKETVKA 209 >gi|213403778|ref|XP_002172661.1| 50S ribosomal protein L3 [Schizosaccharomyces japonicus yFS275] gi|212000708|gb|EEB06368.1| 50S ribosomal protein L3 [Schizosaccharomyces japonicus yFS275] Length = 264 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 95/198 (47%), Positives = 123/198 (62%), Gaps = 3/198 (1%) Query: 2 RSGVVARKLGMTCVYNIEG-RRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R G + K GMT V++ +++PVTVL D QVV +T ++GY AVQ+GAG N Sbjct: 47 RPGAILFKKGMTSVWDESTHQQVPVTVLQFDRVQVVGLKTEKRDGYSAVQMGAGLRLPHN 106 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP-VGSVFSPSYFTVGQLVDVTGMTIGKG 119 VS+ ++G FS+ V PK+ + EF+V KDD LP VG+V +P YF VGQ VDV +T GKG Sbjct: 107 VSRALQGHFSANGVYPKRYVKEFQV-KDDSCLPKVGTVLTPEYFQVGQHVDVKALTKGKG 165 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 +G MKR G +HG S SHRS G TG + P RV KKM+G MG TV+N+ V Sbjct: 166 TAGVMKRWGLSGGNDSHGASKSHRSAGGTGQAKIPARVLPGKKMSGHMGHQFRTVQNMLV 225 Query: 180 VSVDDKRGLILVKGCVPG 197 +V + ILVKG VPG Sbjct: 226 WAVHPEHDCILVKGAVPG 243 >gi|163847923|ref|YP_001635967.1| 50S ribosomal protein L3 [Chloroflexus aurantiacus J-10-fl] gi|222525803|ref|YP_002570274.1| 50S ribosomal protein L3 [Chloroflexus sp. Y-400-fl] gi|189042836|sp|A9WH66|RL3_CHLAA RecName: Full=50S ribosomal protein L3 gi|254803663|sp|B9LJD2|RL3_CHLSY RecName: Full=50S ribosomal protein L3 gi|163669212|gb|ABY35578.1| ribosomal protein L3 [Chloroflexus aurantiacus J-10-fl] gi|222449682|gb|ACM53948.1| ribosomal protein L3 [Chloroflexus sp. Y-400-fl] Length = 210 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 89/211 (42%), Positives = 126/211 (59%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GM + +G IPVTV+ C V RT +++GY AVQ+G E + + Sbjct: 1 MIHGLLGRKIGMMQYFTAQGMAIPVTVIAAGPCIVTQIRTPERDGYSAVQLGYEEVEPRK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + + L EF P G V + F GQ VD++G + G+GF Sbjct: 61 LTKPQQGHLKASGGKMLRYLREFSADDPQAHTP-GEVVTVELFRPGQKVDISGTSKGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH F G THG S HR+ GS G PGRV+K ++MAGRMGG RVT++NLEVV Sbjct: 120 AGVVKRHGFRGGPKTHGQSDRHRAPGSIGAGTTPGRVWKGQRMAGRMGGTRVTIQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V ++ L+LVKG VPGA +N + +R + K Sbjct: 180 EVLPEQNLLLVKGSVPGA-RNGLLQIRKAVK 209 >gi|295109477|emb|CBL23430.1| 50S ribosomal protein L3, bacterial [Ruminococcus obeum A2-162] Length = 210 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 126/212 (59%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G+ IPVTVL C V +T + +GY AVQVG GE + K Sbjct: 1 MKKAILATKVGMTQIFNEDGQLIPVTVLQAGPCVVTQVKTEENDGYAAVQVGYGEIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G F V+ ++ + EFR + + VG F G +D T ++ GKGF Sbjct: 61 VNKPEKGHFDKAGVAAQRFVKEFRFENAAEYT-VGQEIKADIFADGDHIDATAISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G DP +VFK K M G MG +VTV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKHMPGHMGNVQVTVQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + L+LVKG VPG KK S + ++++ KS Sbjct: 179 RVDTENNLLLVKGAVPGPKK-SLVTIKETVKS 209 >gi|261749470|ref|YP_003257156.1| 50S ribosomal protein L3 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497563|gb|ACX84013.1| 50S ribosomal protein L3 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 210 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 86/208 (41%), Positives = 130/208 (62%), Gaps = 9/208 (4%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ LGMT +++ G IP T++ + C V+ +T++K+GY A+Q+G + K K+ +K Sbjct: 3 GLIGINLGMTSLFSKNGENIPCTIVKVGPCYVIQVKTMEKDGYSAIQLGIIDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLP---VGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++G F + PKKKL EF+ D L P +GS + + F G+LVDV G+T GKGF Sbjct: 63 ALQGHFRKSGIFPKKKLLEFK----DVLSPSIKLGSQININSFVEGELVDVRGITKGKGF 118 Query: 121 SGAMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 G +KRH F G+ +HG R+ GS G DP R+FK KKMAGRMGG VT+KNL + Sbjct: 119 QGVVKRHKFSGVGERSHGQHNRLRAPGSVGAGSDPSRIFKGKKMAGRMGGKHVTIKNLTI 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVR 207 + +D + ++ G VPG KNS+++++ Sbjct: 179 LKIDVTENIFILNGSVPG-NKNSYLMIK 205 >gi|229821623|ref|YP_002883149.1| ribosomal protein L3 [Beutenbergia cavernae DSM 12333] gi|229567536|gb|ACQ81387.1| ribosomal protein L3 [Beutenbergia cavernae DSM 12333] Length = 220 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 84/211 (39%), Positives = 128/211 (60%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 + ++ KLGMT V++ GR +PVTV+ + V RT + +GY AVQ+ G+ + V+ Sbjct: 12 TALLGTKLGMTQVWDDAGRLVPVTVVQVGTNVVSAVRTPETDGYSAVQLAFGQIDPRKVT 71 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 +P++G F+ V+P++ + E R + P G + F GQ VDV G T GKG +G Sbjct: 72 QPLKGHFAKAGVTPRRHVAEIRTGDAAEYTP-GQELTVEVFAAGQGVDVVGTTKGKGTAG 130 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G P RVF+ +MAGRMG +R TV+NL++ +V Sbjct: 131 VMKRHGFSGVGASHGAHRNHRKAGSIGGASTPSRVFRGLRMAGRMGNDRHTVQNLKIHAV 190 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+LV G +PG + ++V+ + K A Sbjct: 191 DAEKGLLLVTGALPG-PRGGLVVVKTASKEA 220 >gi|218135281|ref|ZP_03464085.1| hypothetical protein BACPEC_03186 [Bacteroides pectinophilus ATCC 43243] gi|217990666|gb|EEC56677.1| hypothetical protein BACPEC_03186 [Bacteroides pectinophilus ATCC 43243] Length = 211 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 125/212 (58%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G PVTVL C V +TL+ +GY AVQVG + + K Sbjct: 1 MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTLENDGYEAVQVGFADKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+G F VS K+ + EFR + + V F G +D T ++ GKGF Sbjct: 61 VNKPMKGHFDKAGVSYKRFVREFRFENASEY-NVKDEIKADIFAAGDKIDATAISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G PGRVFK K M G+MG R+T++NLEVV Sbjct: 120 QGAIKRHGQSRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGQMGAKRITIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + +ILVKG VPG KK S + ++++ K+ Sbjct: 179 RVDAENNIILVKGAVPGPKK-SLVTLKETVKT 209 >gi|315640161|ref|ZP_07895283.1| 50S ribosomal protein L3 [Enterococcus italicus DSM 15952] gi|315484138|gb|EFU74612.1| 50S ribosomal protein L3 [Enterococcus italicus DSM 15952] Length = 209 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 97/214 (45%), Positives = 131/214 (61%), Gaps = 8/214 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQLKTVENDGYEAVQVGYQDLREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118 +KP +G + N +PK+ + EF KD +L L VGS F G +VDVTG T GK Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KDVELEGLEVGSEIKVDAFQAGDIVDVTGTTKGK 117 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE Sbjct: 118 GFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLE 175 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +V VD +R +IL+KG VPGAKK S I ++ + K+ Sbjct: 176 IVRVDAERNVILIKGNVPGAKK-SLITIKSAVKA 208 >gi|159028206|emb|CAO89813.1| rplC [Microcystis aeruginosa PCC 7806] Length = 212 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 89/198 (44%), Positives = 119/198 (60%), Gaps = 3/198 (1%) Query: 1 MRSGVVARKLGMTCVY-NIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT ++ N G IPVTV+ C V +T +GY ++QVG K K Sbjct: 1 MSIGILGTKLGMTQIFDNKTGVAIPVTVVQAGPCPVTQVKTKKTDGYESIQVGYKTVKEK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP+ G + VSP + L E+R++ D +G + + F G LVDV G TIG+G Sbjct: 61 ALNKPLLGHLAKAGVSPLRHLIEYRLE-DASAYTLGQEITAAIFQEGDLVDVAGTTIGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG KRHNF THG S +HR GSTG PGRVF K+MAG+ G +VT++ L V Sbjct: 120 FSGYQKRHNFKRGNMTHG-SKNHRLPGSTGAGTTPGRVFPGKRMAGQYGSTQVTIRKLSV 178 Query: 180 VSVDDKRGLILVKGCVPG 197 V +D +R LIL+KG VPG Sbjct: 179 VKIDSERNLILIKGAVPG 196 >gi|153952861|ref|YP_001393626.1| 50S ribosomal protein L3 [Clostridium kluyveri DSM 555] gi|219853526|ref|YP_002470648.1| hypothetical protein CKR_0183 [Clostridium kluyveri NBRC 12016] gi|189042838|sp|A5N4P7|RL3_CLOK5 RecName: Full=50S ribosomal protein L3 gi|254803666|sp|B9DYA9|RL3_CLOK1 RecName: Full=50S ribosomal protein L3 gi|146345742|gb|EDK32278.1| RplC [Clostridium kluyveri DSM 555] gi|219567250|dbj|BAH05234.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 209 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 130/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +KLGMT ++N GR IPVTV+ C VV +T +K+GY ++Q+G G+ + K Sbjct: 1 MKKAILGKKLGMTQIFNENGRVIPVTVIEAGPCVVVQKKTEEKDGYKSIQIGFGDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F+ VS K+ L EF+V D+ VG F G +DV+G++ GKGF Sbjct: 61 VNKPLKGHFAKSGVSLKRFLKEFKVDNIDE-YEVGQEIKADIFAEGDRIDVSGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G ++R N +HG S HR+ GS G DP R FKNKKM G MG TV NL+V Sbjct: 120 QGVIRRWNAQRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKKMPGHMGNKNTTVLNLQVA 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ +IL+KG VPG K S++ ++D+ K+ Sbjct: 179 KVIPEKNIILIKGGVPGPNK-SFVSIKDTVKA 209 >gi|318042564|ref|ZP_07974520.1| 50S ribosomal protein L3 [Synechococcus sp. CB0101] Length = 215 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 86/197 (43%), Positives = 122/197 (61%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ EGR IPVTV+ C++ +T +GY AVQ+G G+ + K Sbjct: 1 MSIGILGKKLGMSQFFDDEGRSIPVTVIEAGPCRITQLKTDSTDGYTAVQLGFGDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G + P + L E+RV D L +G + + F GQ VDV+G TIG+GF Sbjct: 61 VNKPAKGHLAKSGSEPLRHLKEYRVDTVDG-LELGGAITVAAFEAGQKVDVSGDTIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F THG S +HR GSTG PGRV+ K+MAGR GG ++T + L ++ Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRVYPGKRMAGRYGGKQITTRGLVIL 178 Query: 181 SVDDKRGLILVKGCVPG 197 VD +R L++VKG VPG Sbjct: 179 KVDAERNLLVVKGSVPG 195 >gi|125975384|ref|YP_001039294.1| 50S ribosomal protein L3P [Clostridium thermocellum ATCC 27405] gi|256005329|ref|ZP_05430295.1| ribosomal protein L3 [Clostridium thermocellum DSM 2360] gi|281419346|ref|ZP_06250361.1| 50S ribosomal protein L3 [Clostridium thermocellum JW20] gi|166233136|sp|A3DJH2|RL3_CLOTH RecName: Full=50S ribosomal protein L3 gi|125715609|gb|ABN54101.1| LSU ribosomal protein L3P [Clostridium thermocellum ATCC 27405] gi|255990765|gb|EEU00881.1| ribosomal protein L3 [Clostridium thermocellum DSM 2360] gi|281406966|gb|EFB37229.1| 50S ribosomal protein L3 [Clostridium thermocellum JW20] gi|316939500|gb|ADU73534.1| 50S ribosomal protein L3 [Clostridium thermocellum DSM 1313] Length = 212 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 92/214 (42%), Positives = 132/214 (61%), Gaps = 6/214 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ RK+GMT V++ +G IPVTV+ VV + + +GY +V+V G+ + K Sbjct: 1 MEKFMLGRKIGMTQVFDEDGLLIPVTVIEAGPITVVQKKKPETDGYNSVRVAFGDVQEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G F+ + ++PKK + EFRV D + F G VDVTG++ GKGF Sbjct: 61 LNKPEKGLFAKLGIAPKKYIREFRVDDPDKYELKQEIKVEEMFQPGDRVDVTGISKGKGF 120 Query: 121 SGAMKRHNFGGLR--ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KR FG R THG S+ HR GS G +P RVFK KK+ G MG RVTV+NL+ Sbjct: 121 AGVIKR--FGNRRGKETHG-SMYHRRVGSMGANTNPARVFKGKKLPGHMGVERVTVQNLD 177 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VV VD +R L+LVKG VPGA K ++++D+ K+ Sbjct: 178 VVKVDAERNLMLVKGAVPGA-KGGLLMIKDTVKA 210 >gi|120609041|ref|YP_968719.1| 50S ribosomal protein L3 [Acidovorax citrulli AAC00-1] gi|326315224|ref|YP_004232896.1| 50S ribosomal protein L3 [Acidovorax avenae subsp. avenae ATCC 19860] gi|166233109|sp|A1TJ07|RL3_ACIAC RecName: Full=50S ribosomal protein L3 gi|120587505|gb|ABM30945.1| LSU ribosomal protein L3P [Acidovorax citrulli AAC00-1] gi|323372060|gb|ADX44329.1| 50S ribosomal protein L3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 224 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 88/216 (40%), Positives = 128/216 (59%), Gaps = 13/216 (6%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G +PVTV+ + N +V +T + +GY+A+QV G K V+K Sbjct: 8 GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVALQVTFGSRKASRVTK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDD-------LLPVGSVFSPSYFTVGQLVDVTGMTI 116 P G + V + + EFRV + +PV VFS VGQ VDV G +I Sbjct: 68 PEAGHLAKAGVEAGEIIREFRVTAETAGKYATGAAVPVADVFS-----VGQKVDVQGTSI 122 Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 GKG++G +KRHN RA+HG S SH GS G QDPGRVF K+M G +G T +N Sbjct: 123 GKGYAGTIKRHNMASQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDATTTTQN 182 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 L+V+ VD+ R L+L+KG +PG+ K ++ VR + K+ Sbjct: 183 LDVIRVDEARQLLLIKGAIPGS-KGGFVTVRPAVKA 217 >gi|51598732|ref|YP_072920.1| 50S ribosomal protein L3 [Borrelia garinii PBi] gi|81825630|sp|Q661E3|RL3_BORGA RecName: Full=50S ribosomal protein L3 gi|51573303|gb|AAU07328.1| ribosomal protein L3 [Borrelia garinii PBi] Length = 206 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 93/209 (44%), Positives = 129/209 (61%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ G IPVTV+ ++ +T+D++GY A+ G+ + K VSK Sbjct: 3 GLIGKKVGMTQIFQKNGIVIPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKVSK 62 Query: 64 PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + S+ ++ PKK + E K D G F + VDVTG T GKGF G Sbjct: 63 PIKGQYKSLKDIEPKKYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNKQTIQNLEVVLI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D++ ILVKG VPGA K S+++V+ S K Sbjct: 179 DEENRAILVKGAVPGA-KGSFVVVKKSKK 206 >gi|167629467|ref|YP_001679966.1| 50S ribosomal protein l3 [Heliobacterium modesticaldum Ice1] gi|212288399|sp|B0TC56|RL3_HELMI RecName: Full=50S ribosomal protein L3 gi|167592207|gb|ABZ83955.1| 50S ribosomal protein l3 [Heliobacterium modesticaldum Ice1] Length = 210 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 91/211 (43%), Positives = 129/211 (61%), Gaps = 4/211 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 + G++ RK+GMT V+ G +PVTV+ C VV +T++K+GY AVQ+G G+ + K + Sbjct: 3 KKGLLGRKIGMTQVFADNGVAVPVTVVQAGPCVVVQKKTVEKDGYEAVQIGFGDVREKLL 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP RG + V + L E +V D+ VG F+ G+ VDV G + GKGF+ Sbjct: 63 NKPKRGHLKNAGVRLVRVLREIKVDSMDE-YKVGQELKADVFSAGEYVDVVGTSKGKGFA 121 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNF HG S HR GS G + P R+FK +KM GRMG RVTV+ L+VV Sbjct: 122 GGIKRHNFKRGPMKHG-SKYHRRPGSAGAK-GPARIFKGRKMPGRMGNERVTVQKLQVVR 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPG K+ +L++ S K+ Sbjct: 180 VDAERNLLLIKGAVPGPKR-GLLLIKSSIKA 209 >gi|213425750|ref|ZP_03358500.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 199 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 89/187 (47%), Positives = 118/187 (63%), Gaps = 1/187 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+KP G F+ Sbjct: 1 MTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVTKPEAGHFAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G +KR NF Sbjct: 61 AGVEAGRGLWEFRLAEGEEYT-VGQSISVELFADVKKVDVTGTSKGKGFAGTVKRWNFRT 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV VD +R L+LV Sbjct: 120 QDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAERNLLLV 179 Query: 192 KGCVPGA 198 KG VPGA Sbjct: 180 KGGVPGA 186 >gi|187776576|ref|ZP_02993049.1| hypothetical protein CLOSPO_00090 [Clostridium sporogenes ATCC 15579] gi|187775235|gb|EDU39037.1| hypothetical protein CLOSPO_00090 [Clostridium sporogenes ATCC 15579] Length = 216 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 87/212 (41%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +KLGMT ++N G+ IPVTV+ C V+ +T++K+GY A+QV G+ + K Sbjct: 8 MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 67 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP++G F+ VS K+ + EF+++ D + L VG F G+ VD++G++ GKGF Sbjct: 68 RNKPVKGHFAKAGVSVKRHIKEFKLE-DSNSLEVGQEIKADVFEAGERVDISGVSKGKGF 126 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G ++R N THG S HR+ GS G DP R FKNK+M G MG TV NLEVV Sbjct: 127 QGTIRRWNAHRGPMTHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 185 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + ++ LIL+KG VPG K + +R++ K+ Sbjct: 186 RIIPEKNLILIKGGVPGPNK-GLVQIRNTVKA 216 >gi|216263354|ref|ZP_03435349.1| ribosomal protein L3 [Borrelia afzelii ACA-1] gi|215980198|gb|EEC21019.1| ribosomal protein L3 [Borrelia afzelii ACA-1] Length = 206 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 92/209 (44%), Positives = 130/209 (62%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ G +PVTV+ ++ +T+D++GY A+ G+ + K VSK Sbjct: 3 GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKVSK 62 Query: 64 PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + S+ ++ PKK + E K D G F + VDVTG T GKGF G Sbjct: 63 PIKGQYKSLKDIEPKKYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D+++ ILVKG VPGA K S+++V+ S K Sbjct: 179 DEEKRAILVKGAVPGA-KGSFVVVKKSKK 206 >gi|118443770|ref|YP_877198.1| 50S ribosomal protein L3 [Clostridium novyi NT] gi|166233135|sp|A0PXU6|RL3_CLONN RecName: Full=50S ribosomal protein L3 gi|118134226|gb|ABK61270.1| ribosomal protein L3 [Clostridium novyi NT] Length = 209 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 86/212 (40%), Positives = 130/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ RK+GMT +++ G+ IPVTV+ C V+ +T +K+GY A+QVG + + K Sbjct: 1 MKKAIIGRKIGMTQIFDENGKVIPVTVVEAGPCAVLQKKTEEKDGYNAIQVGFEDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G F+ VS K+ + EFR++ D+ VG+ F G VDVTG++ GKGF Sbjct: 61 ANKPKKGHFAKAGVSLKRIVREFRLENIDE-YEVGTEIKADVFAAGDKVDVTGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF HG S HR+ GS G DP R FKNKKM G MG + T+ N+EVV Sbjct: 120 QGTIKRWNFHRGPMAHG-SKYHRAVGSMGAASDPSRTFKNKKMPGHMGNKKSTILNIEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V + ++L+KG +PG K +++++D+ K+ Sbjct: 179 KVMADKNVLLIKGGIPGPNK-GYVVIKDTVKA 209 >gi|300742057|ref|ZP_07072078.1| 50S ribosomal protein L3 [Rothia dentocariosa M567] gi|311111973|ref|YP_003983195.1| 50S ribosomal protein L3 [Rothia dentocariosa ATCC 17931] gi|300381242|gb|EFJ77804.1| 50S ribosomal protein L3 [Rothia dentocariosa M567] gi|310943467|gb|ADP39761.1| 50S ribosomal protein L3 [Rothia dentocariosa ATCC 17931] Length = 218 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 88/210 (41%), Positives = 122/210 (58%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ +G+ +PVTV+ D+ + R + +GY AVQ+G G + V+K Sbjct: 11 GLLGTKLGMTQVWDEDGKVVPVTVVKADSNVITQIRNQETDGYHAVQIGFGSIDSRKVTK 70 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+P++ L E R D +G + F GQ VDV G T GKGF+G Sbjct: 71 PLAGHFEKAGVTPRRHLVELRTA-DAAEYSLGQELTVEMFEPGQKVDVVGKTKGKGFAGV 129 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G+ A+HG +HR GS G P RVFK +MAGRMG R T NL + VD Sbjct: 130 MKRHGFKGVGASHGQHKNHRKPGSIGGASYPARVFKGMRMAGRMGAARHTTLNLTIQGVD 189 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + ++L+KG +PG K +LVR + K A Sbjct: 190 AENNVLLIKGAIPGP-KGGVVLVRTAVKGA 218 >gi|167749439|ref|ZP_02421566.1| hypothetical protein EUBSIR_00393 [Eubacterium siraeum DSM 15702] gi|167657611|gb|EDS01741.1| hypothetical protein EUBSIR_00393 [Eubacterium siraeum DSM 15702] gi|291532093|emb|CBK97678.1| LSU ribosomal protein L3P [Eubacterium siraeum 70/3] gi|291558166|emb|CBL35283.1| LSU ribosomal protein L3P [Eubacterium siraeum V10Sc8a] Length = 211 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 87/215 (40%), Positives = 127/215 (59%), Gaps = 6/215 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT +++ G+ +PVTV+ C V +T + +GY AVQ+G G+ K+ Sbjct: 1 MTKGLIGKKIGMTQIFDEAGKVVPVTVIEAGPCVVTQLKTAENDGYEAVQLGFGDVSPKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118 +KPM G F ++ K+ L EFR+ DD+ + VG V F G ++DV+G++ GK Sbjct: 61 TNKPMTGHFKKNDLPFKRTLKEFRL---DDISNVNVGDVLKADVFAAGDVIDVSGVSKGK 117 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF GA+KRHN L+ THG R GS G P R+FK K MAG MG VTV+NL Sbjct: 118 GFQGAIKRHNQHRLKETHGTGPVVRQAGSMGACSSPSRIFKGKGMAGHMGAENVTVQNLV 177 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +V +D + LI +KG +PG K + + D+ K A Sbjct: 178 IVKIDAENNLIAIKGAIPGP-KGGVVCITDAVKKA 211 >gi|168181864|ref|ZP_02616528.1| 50S ribosomal protein L3 [Clostridium botulinum Bf] gi|237796942|ref|YP_002864494.1| 50S ribosomal protein L3 [Clostridium botulinum Ba4 str. 657] gi|259647405|sp|C3KVQ1|RL3_CLOB6 RecName: Full=50S ribosomal protein L3 gi|182674831|gb|EDT86792.1| 50S ribosomal protein L3 [Clostridium botulinum Bf] gi|229262333|gb|ACQ53366.1| 50S ribosomal protein L3 [Clostridium botulinum Ba4 str. 657] Length = 209 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 86/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +KLGMT ++N G+ IPVTV+ C V+ +T++K+GY A+QV G+ + K Sbjct: 1 MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP++G F+ VS K+ + EF+++ D + L +G F G+ VD++G++ GKGF Sbjct: 61 RNKPVKGHFAKAGVSVKRHIKEFKLE-DSNSLEIGQEIKADVFEAGERVDISGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G ++R N THG S HR+ GS G DP R FKNK+M G MG TV NLEVV Sbjct: 120 QGTIRRWNAHRGPMTHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + ++ LIL+KG VPG K + +R++ K+ Sbjct: 179 RIIPEKNLILIKGGVPGPNK-GLVQIRNTVKA 209 >gi|189501211|ref|YP_001960681.1| 50S ribosomal protein L3 [Chlorobium phaeobacteroides BS1] gi|226725147|sp|B3EP61|RL3_CHLPB RecName: Full=50S ribosomal protein L3 gi|189496652|gb|ACE05200.1| ribosomal protein L3 [Chlorobium phaeobacteroides BS1] Length = 209 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 91/211 (43%), Positives = 124/211 (58%), Gaps = 5/211 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 + ++ +K+GMT +YN P TV+ C V +T + +GY A Q+ GE K VS Sbjct: 2 AAILGKKIGMTSIYNANREAEPCTVIQAGPCFVSQVKTTENDGYEAYQLSIGERKEAKVS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPV--GSVFSPSYFTVGQLVDVTGMTIGKGF 120 KP+RG F+ ++P K+ EF KDD L + GS S F+ G V+V G++ GKGF Sbjct: 62 KPLRGHFAKAGIAPGYKVVEF--GKDDMGLDLEQGSAVSVEIFSAGDAVEVQGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNF G + THG S R+ GS G DP R FK KM GRMGG V VK LE+V Sbjct: 120 AGVVKRHNFSGGQRTHGQSDRLRAPGSVGGASDPSRTFKGTKMGGRMGGKTVKVKGLEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V + L+++KG VPG KNS++ + S K Sbjct: 180 KVIPESNLLVIKGSVPGV-KNSYVQIVSSKK 209 >gi|153214894|ref|ZP_01949692.1| ribosomal protein L3 [Vibrio cholerae 1587] gi|124115053|gb|EAY33873.1| ribosomal protein L3 [Vibrio cholerae 1587] Length = 184 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 86/183 (46%), Positives = 116/183 (63%), Gaps = 1/183 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV G K V+K Sbjct: 3 GLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGSKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF GA Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQGA 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVD 181 Query: 184 DKR 186 +R Sbjct: 182 AER 184 >gi|78484640|ref|YP_390565.1| ribosomal protein L3 [Thiomicrospira crunogena XCL-2] gi|109893569|sp|Q31IY2|RL3_THICR RecName: Full=50S ribosomal protein L3 gi|78362926|gb|ABB40891.1| LSU ribosomal protein L3P [Thiomicrospira crunogena XCL-2] Length = 212 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 93/213 (43%), Positives = 127/213 (59%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GV+ K+GMT V+N +G PVTV+ + ++ + + +GY A+QV G Sbjct: 1 MGIGVIGTKVGMTRVFNEDGVSTPVTVVEVSPNRITQIKNNETDGYDAIQVTFGSKHAGR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118 VSKP G ++ V + L+EFR+ ++ L GS + F +VDV+G T GK Sbjct: 61 VSKPEAGHYAKAGVEAGQGLWEFRLDDVSEVEGLEPGSEITVEKFNDVAVVDVSGTTKGK 120 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G +KRHNF ATHG S+SHR+ GS G Q PGRVFK KKMAG MG + T NLE Sbjct: 121 GFQGGVKRHNFKMQDATHGNSVSHRAPGSIGQNQTPGRVFKGKKMAGHMGNVKQTTLNLE 180 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +V VD + L+L+KG +PGA K S ++VR + K Sbjct: 181 LVKVDVENSLLLIKGALPGA-KGSTVIVRKAIK 212 >gi|34811555|pdb|1PNU|B Chain B, Crystal Structure Of A Streptomycin Dependent Ribosome From Escherichia Coli, 50s Subunit Of 70s Ribosome. This File, 1pnu, Contains Only Molecules Of The 50s Ribosomal Subunit. The 30s Subunit, Mrna, P-Site Trna, And A-Site Trna Are In The Pdb File 1pns. gi|34811608|pdb|1PNY|B Chain B, Crystal Structure Of The Wild Type Ribosome From E. Coli, 50s Subunit Of 70s Ribosome. This File, 1pny, Contains Only Molecules Of The 50s Ribosomal Subunit. The 30s Subunit Is In The Pdb File 1pnx. gi|56966347|pdb|1VOR|E Chain E, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966400|pdb|1VOU|E Chain E, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966453|pdb|1VOW|E Chain E, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966506|pdb|1VOY|E Chain E, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966559|pdb|1VP0|E Chain E, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400 Length = 205 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 89/210 (42%), Positives = 123/210 (58%), Gaps = 7/210 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ K+GMT ++ + R IPVTV+ C +V +T +GY AVQ+G + V+K Sbjct: 3 GILGTKIGMTQIWKND-RAIPVTVVLAGPCPIVQRKTAQTDGYEAVQIGYAPKAERKVNK 61 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 PM+G F+ V+P + L EFR P G + F G+ +D TG + GKG G Sbjct: 62 PMQGHFAKAGVAPTRILREFR-----GFAPDGDSVNVDIFAEGEKIDATGTSKGKGTQGV 116 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR NF G A+HG HR GS G R+ PGRV+K K+MAG MG RVTV+NLEVV + Sbjct: 117 MKRWNFAGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGHMGMERVTVQNLEVVEIR 176 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 LILVKG +PGA +++R + K++ Sbjct: 177 AGENLILVKGAIPGA-NGGLVVLRSAAKAS 205 >gi|253682166|ref|ZP_04862963.1| 50S ribosomal protein L3 [Clostridium botulinum D str. 1873] gi|253561878|gb|EES91330.1| 50S ribosomal protein L3 [Clostridium botulinum D str. 1873] Length = 209 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 130/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ RK+GMT +++ G+ IPVTV+ C V+ +T +K+GY A+QVG + + K Sbjct: 1 MKKAIIGRKVGMTQIFDENGKVIPVTVVEAGPCAVLQKKTEEKDGYNAIQVGFEDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G F+ VS K+ + EFR++ D+ VGS F G VDVTG++ GKGF Sbjct: 61 ANKPKKGHFAKAGVSLKRIVREFRLENIDE-YEVGSEIKADVFEAGDKVDVTGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF HG S HR+ GS G DP R FKNKKM G MG + TV NLEVV Sbjct: 120 QGTIKRWNFHRGPMAHG-SKYHRAVGSMGAASDPSRTFKNKKMPGHMGHKKSTVLNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V + +IL+KG +PG K +++++++ K+ Sbjct: 179 KVMADKNVILIKGGIPGPNK-GYVVIKNTVKA 209 >gi|56751874|ref|YP_172575.1| 50S ribosomal protein L3 [Synechococcus elongatus PCC 6301] gi|81301041|ref|YP_401249.1| 50S ribosomal protein L3 [Synechococcus elongatus PCC 7942] gi|3122742|sp|O24689|RL3_SYNP6 RecName: Full=50S ribosomal protein L3 gi|109893565|sp|Q31L07|RL3_SYNE7 RecName: Full=50S ribosomal protein L3 gi|2446890|dbj|BAA22449.1| 50S ribosomal protein L3 [Synechococcus elongatus PCC 6301] gi|56686833|dbj|BAD80055.1| 50S ribosomal protein L3 [Synechococcus elongatus PCC 6301] gi|81169922|gb|ABB58262.1| LSU ribosomal protein L3P [Synechococcus elongatus PCC 7942] Length = 213 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 85/197 (43%), Positives = 116/197 (58%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT +++ G+ +PVTV+ C + +T+ +GY A+Q+G E + K Sbjct: 1 MSIGILGTKLGMTQIFDESGKAVPVTVIQAGPCPITQIKTVATDGYNAIQIGFLEVREKQ 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SKP G S P + L E+RV D L +G + F GQ VDV G TIG+GF Sbjct: 61 LSKPELGHLSKAGAPPLRHLLEYRVPSTDG-LELGQALTADRFEAGQKVDVQGHTIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F +HG S +HR GSTG PGRV+ K+MAGR G ++ T++ L VV Sbjct: 120 TGYQKRHGFARGPMSHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGRSGNDKTTIRGLTVV 178 Query: 181 SVDDKRGLILVKGCVPG 197 VD R L+LVKG VPG Sbjct: 179 RVDADRNLLLVKGSVPG 195 >gi|89891148|ref|ZP_01202656.1| 50S ribosomal protein L3 (rplC) [Flavobacteria bacterium BBFL7] gi|89516792|gb|EAS19451.1| 50S ribosomal protein L3 (rplC) [Flavobacteria bacterium BBFL7] Length = 205 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 86/206 (41%), Positives = 127/206 (61%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ RK+GMT +Y+ G+ +P T++ C V RT + +GY A+Q+G + KN S Sbjct: 2 SGLIGRKIGMTSIYDENGKNMPCTIIEAGPCVVTQVRTEEVDGYSALQLGFDDKSDKNAS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K +G F KKK+ EF Q D++ +G S FT G+ +DV+G + GKGF G Sbjct: 62 KAAQGHFKKAGTGVKKKVVEF--QGFDEVYKLGDAISVDIFTEGEFIDVSGTSKGKGFQG 119 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH F G+ +ATHG R+ GS G P RVFK +MAG+MG +V V+NL V+ Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGQMGNEKVKVENLRVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L++VKGCVPG KNS+++++ Sbjct: 180 VVPEKNLLVVKGCVPG-HKNSYVILQ 204 >gi|110800321|ref|YP_697094.1| 50S ribosomal protein L3 [Clostridium perfringens ATCC 13124] gi|161485641|ref|NP_563321.2| 50S ribosomal protein L3 [Clostridium perfringens str. 13] gi|182626914|ref|ZP_02954647.1| ribosomal protein L3 [Clostridium perfringens D str. JGS1721] gi|42559666|sp|Q8XHS3|RL3_CLOPE RecName: Full=50S ribosomal protein L3 gi|123049583|sp|Q0TMP6|RL3_CLOP1 RecName: Full=50S ribosomal protein L3 gi|110674968|gb|ABG83955.1| 50S ribosomal protein L3 [Clostridium perfringens ATCC 13124] gi|177907704|gb|EDT70319.1| ribosomal protein L3 [Clostridium perfringens D str. JGS1721] Length = 209 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT +++ GR IPVTV+ C VV +T++ +GY A+QVG GE + K Sbjct: 1 MKKAIIGKKVGMTQIFDENGRVIPVTVVEAGPCVVVQKKTVETDGYDAIQVGFGELREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G F+ VS ++ L EFR++ D VG F +G VDV+G++ GKGF Sbjct: 61 VNKPRKGHFAKAGVSLRRTLKEFRME-DVANYNVGDEIKVDTFEIGDKVDVSGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR N +HG S HR+ GS G DP R FKNK+M G MG TV NLEVV Sbjct: 120 QGTIKRWNASRGPMSHG-SKFHRAPGSMGAASDPSRTFKNKRMPGHMGAKNTTVLNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + ++ +IL+KG +PG K + +++R+S K+ Sbjct: 179 KIMPEKNIILIKGGIPGPNKGT-VVIRNSVKA 209 >gi|196228455|ref|ZP_03127322.1| ribosomal protein L3 [Chthoniobacter flavus Ellin428] gi|196227858|gb|EDY22361.1| ribosomal protein L3 [Chthoniobacter flavus Ellin428] Length = 215 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 89/207 (42%), Positives = 129/207 (62%), Gaps = 3/207 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +K+GMT VY+ +G+ PVTV+ V+ +T + +GY+ VQVG K + Sbjct: 1 MKIGLLGKKIGMTRVYDDKGKATPVTVIEAGGNTVLQTKTQENDGYVGVQVGFDVQKEQR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++P+ G F PKK + EFR+ DD L S S F VG +VDV G + GKGF Sbjct: 61 VTQPLLGHFKKAGSEPKKLVKEFRL-PDDVKLDGALDLSVSQFAVGDVVDVIGRSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +++HN G A+HG S+ HR +G+ G R PGR++KN M G MG RVTV+NL+VV Sbjct: 120 QGVIRKHNMAGQGASHG-SMMHRRNGAIGNRSTPGRIWKNMGMPGHMGDERVTVQNLKVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207 V + G+IL+ G VPGA ++I++R Sbjct: 179 QVRPEEGVILISGAVPGA-NGTYIVIR 204 >gi|296392585|ref|YP_003657469.1| 50S ribosomal protein L3 [Segniliparus rotundus DSM 44985] gi|296179732|gb|ADG96638.1| 50S ribosomal protein L3 [Segniliparus rotundus DSM 44985] Length = 221 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 90/215 (41%), Positives = 125/215 (58%), Gaps = 6/215 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ R +PVTV+ V RT +++ Y A+Q+ G + V Sbjct: 9 RVGLLGAKLGMTQVFDERNRVVPVTVIRTGVNVVTQVRTPERDKYSAIQLAFGHIDPRKV 68 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP+ G F V+P++ L EFR+ DD+ VG + F+ G LVDVTG + GKG Sbjct: 69 NKPLAGQFEKAGVTPRRHLAEFRL---DDVSGYEVGQQIDATVFSAGDLVDVTGTSKGKG 125 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKRH F G A+HG HR GS G PGRVFK +MAGRMG + T +NL V Sbjct: 126 FAGTMKRHGFKGQGASHGAHKVHRRPGSIGACAFPGRVFKGTRMAGRMGNAKTTTQNLTV 185 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 VD + G++L+KG VPG + + +R + K V Sbjct: 186 FRVDPEAGVLLIKGAVPG-RDGGLVFIRSAVKKGV 219 >gi|213964789|ref|ZP_03392988.1| 50S ribosomal protein L3 [Corynebacterium amycolatum SK46] gi|213952325|gb|EEB63708.1| 50S ribosomal protein L3 [Corynebacterium amycolatum SK46] Length = 218 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 88/213 (41%), Positives = 120/213 (56%), Gaps = 2/213 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT +++ E R +PVTV+ C V RT + +GY AVQ+ GE + V+K Sbjct: 8 GILGTKLGMTQIFDEENRVVPVTVVEAGPCVVTQVRTKETDGYDAVQIAYGEIDPRKVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ E R D VG F + VDVTG + G GF+G Sbjct: 68 PEAGHFKKAGVTPRRHSVEIRT-PDASSYEVGQSVGVDIFGEIEYVDVTGTSKGHGFAGG 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G A HG +HR G G PGRVFK K+MAGRMG +RVT +NL++ VD Sbjct: 127 MKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGKRMAGRMGNDRVTTQNLKIQKVD 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 L+L+KG VPGA + ++V+ + K + Sbjct: 187 ADANLLLIKGAVPGA-RGGLLVVKTATKGGAHA 218 >gi|163752917|ref|ZP_02160041.1| 50S ribosomal protein L3 [Kordia algicida OT-1] gi|161326649|gb|EDP97974.1| 50S ribosomal protein L3 [Kordia algicida OT-1] Length = 205 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 87/206 (42%), Positives = 126/206 (61%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G + K S Sbjct: 2 SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTNEVDGYEALQLGFDDKAEKRAS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F SPK K+ EF Q ++ +G + +F G+ VDV G + GKGF G Sbjct: 62 KAANGHFKKAGTSPKYKVVEF--QGFEEEYKLGDSITVEHFEEGEFVDVAGTSKGKGFQG 119 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG+ +ATHG R+ GS G P RVFK +MAGRMGG +V V+NL V+ Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGEKVKVQNLRVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L++VKGCVPG KN++++V+ Sbjct: 180 VVPEKNLLVVKGCVPG-HKNAYVIVQ 204 >gi|166368484|ref|YP_001660757.1| 50S ribosomal protein L3 [Microcystis aeruginosa NIES-843] gi|189042851|sp|B0JI03|RL3_MICAN RecName: Full=50S ribosomal protein L3 gi|166090857|dbj|BAG05565.1| 50S ribosomal protein L3 [Microcystis aeruginosa NIES-843] Length = 212 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 89/198 (44%), Positives = 118/198 (59%), Gaps = 3/198 (1%) Query: 1 MRSGVVARKLGMTCVY-NIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT ++ N G IPVTV+ C V +T +GY ++QVG K K Sbjct: 1 MSIGILGTKLGMTQIFDNKTGVAIPVTVVQAGPCPVTQVKTKKTDGYESIQVGYKTVKEK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP+ G + VSP + L E+R++ D +G + F G LVDV G TIG+G Sbjct: 61 ALNKPLLGHLAKAGVSPLRHLIEYRLE-DASAYTLGQEITADIFQEGDLVDVAGTTIGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG KRHNF THG S +HR GSTG PGRVF K+MAG+ G +VT++ L V Sbjct: 120 FSGYQKRHNFKRGNMTHG-SKNHRLPGSTGAGTTPGRVFPGKRMAGQYGSTQVTIRKLSV 178 Query: 180 VSVDDKRGLILVKGCVPG 197 V +D +R LIL+KG VPG Sbjct: 179 VKIDSERNLILIKGAVPG 196 >gi|56961932|ref|YP_173654.1| 50S ribosomal protein L3 [Bacillus clausii KSM-K16] gi|81822272|sp|Q5WLR2|RL3_BACSK RecName: Full=50S ribosomal protein L3 gi|56908166|dbj|BAD62693.1| 50S ribosomal protein L3 [Bacillus clausii KSM-K16] Length = 206 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 93/212 (43%), Positives = 132/212 (62%), Gaps = 6/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ + V+ +T++ +GY A+Q+G +AK N Sbjct: 1 MTKGILGRKIGMTQVFAENGEVIPVTVIEAEPNIVLQKKTVESDGYEAIQIGFADAKKPN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 KP G + +PK+ + E R D++ VG + + F G LVDVTG + GKGF Sbjct: 61 --KPATGHAAKAETAPKRFIKEIRGVNLDEV-EVGQAINVTTFAAGDLVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRHN +HG S HR GS G P RVFK K + GRMGG ++T++NLE+V Sbjct: 118 QGAIKRHNQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKALPGRMGGEQITMQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD++R L+LVKG VPGAKK S++ V+ + K+ Sbjct: 176 RVDEERNLLLVKGNVPGAKK-SYVTVQSAVKA 206 >gi|322812575|pdb|3PYO|D Chain D, Crystal Structure Of A Complex Containing Domain 3 From The Psiv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 50s Subunit Of The First 70s Ribosome. gi|322812628|pdb|3PYR|D Chain D, Crystal Structure Of A Complex Containing Domain 3 From The Psiv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|322812681|pdb|3PYT|D Chain D, Crystal Structure Of A Complex Containing Domain 3 Of Crpv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 50s Subunit Of The First 70s Ribosome. gi|322812734|pdb|3PYV|D Chain D, Crystal Structure Of A Complex Containing Domain 3 Of Crpv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 50s Subunit Of The Second 70s Ribosome Length = 204 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 92/209 (44%), Positives = 124/209 (59%), Gaps = 7/209 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ K+GMT ++ + R +PVTV+ C VV RT +K+GY AVQ+G K V++ Sbjct: 3 GILGVKVGMTRIFR-DDRAVPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLPQNPKRVNR 61 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ V P + L E R D P G + F G+ VDVTG + G+GF+G Sbjct: 62 PLKGHFAKAGVEPVRILREIR-----DFNPEGDTVTVEIFKPGERVDVTGTSKGRGFAGV 116 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR NF G +HG HR GS G R+ PGRV+K KKMAG G RVTV NLEVV V Sbjct: 117 MKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGHYGAERVTVMNLEVVDVI 176 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + L+LVKG VPG ++VR++ K+ Sbjct: 177 PEENLLLVKGAVPGP-NGGLVIVRETKKA 204 >gi|317131369|ref|YP_004090683.1| 50S ribosomal protein L3 [Ethanoligenens harbinense YUAN-3] gi|315469348|gb|ADU25952.1| 50S ribosomal protein L3 [Ethanoligenens harbinense YUAN-3] Length = 211 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 89/213 (41%), Positives = 128/213 (60%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +K+GMT +++ G IPVTV+ C VV +T++ +GY +VQ+G E + K Sbjct: 1 MQKGIIGKKIGMTQLFDERGNVIPVTVIEAGPCVVVQKKTVEVDGYESVQLGFEEVREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G F V+ K+ L EFR++ D L VG + F G VDV G + GKG+ Sbjct: 61 LNKPEKGHFEKAGVASKRVLREFRLE-DMSALNVGDIVKADVFAAGDRVDVAGTSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR L+ THG HR GS G + RV K KKMAG+MG RVTV+NL+VV Sbjct: 120 AGVIKRWGHHRLKMTHGTGPVHREVGSMGASTNMSRVPKGKKMAGQMGNERVTVQNLDVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + LI +KG +PG K +++ DS K A Sbjct: 180 KVDAENNLIALKGAIPGP-KGGIVILADSVKKA 211 >gi|226321110|ref|ZP_03796652.1| ribosomal protein L3 [Borrelia burgdorferi 29805] gi|226233520|gb|EEH32259.1| ribosomal protein L3 [Borrelia burgdorferi 29805] gi|312149724|gb|ADQ29795.1| ribosomal protein L3 [Borrelia burgdorferi N40] Length = 206 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 91/209 (43%), Positives = 130/209 (62%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ G IPVTV+ ++ +T+D++GY A+ G+ + K VSK Sbjct: 3 GLIGKKVGMTQIFQKNGIVIPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKVSK 62 Query: 64 PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + S+ ++ PK+ + E K D G F + VDVTG T GKGF G Sbjct: 63 PIKGQYKSLKDIEPKRYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D+++ +LVKG VPGA K S+++V+ S K Sbjct: 179 DEEKRALLVKGAVPGA-KGSFVVVKKSKK 206 >gi|187918344|ref|YP_001883907.1| 50S ribosomal protein L3 [Borrelia hermsii DAH] gi|226725138|sp|B2S0I1|RL3_BORHD RecName: Full=50S ribosomal protein L3 gi|119861192|gb|AAX16987.1| LSU ribosomal protein L3P [Borrelia hermsii DAH] Length = 209 Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 134/212 (63%), Gaps = 6/212 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V+ G +PVTV+ + ++ +T++++GY A+ +G+ + K +SK Sbjct: 3 GLIGKKVGMTQVFQGNGVVVPVTVIEFEPNYIIGKKTVERDGYDALIMGSVDLKSSKISK 62 Query: 64 PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + ++ NV PKK + EF+ K D G F + VD+TG T GKGF G Sbjct: 63 PIKGQYKNLENVEPKKYVIEFKGLKGYD---AGDEVGLDAFKEIKYVDITGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR GSTG P R FK KMAGRMGG + T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGSTGQAATPSRTFKGTKMAGRMGGEQQTIQNLEVVFI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D+++ ILVKG VPG K S+++V+ + K V Sbjct: 179 DEEKRAILVKGAVPGV-KGSFVIVKKAKKVGV 209 >gi|134103264|ref|YP_001108925.1| 50S ribosomal protein L3 [Saccharopolyspora erythraea NRRL 2338] gi|291007943|ref|ZP_06565916.1| 50S ribosomal protein L3 [Saccharopolyspora erythraea NRRL 2338] gi|166234589|sp|A4FPM5|RL3_SACEN RecName: Full=50S ribosomal protein L3 gi|133915887|emb|CAM06000.1| 50S ribosomal protein L3 [Saccharopolyspora erythraea NRRL 2338] Length = 216 Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 88/208 (42%), Positives = 122/208 (58%), Gaps = 2/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ + R +PVTV+ V RT +K+GY AVQ+ G + V+K Sbjct: 8 GILGTKLGMTQVFDDQNRVVPVTVVQAGPNVVTQIRTPEKDGYSAVQLAFGAIDPRKVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V+P++ + E R D VG + F G +VDV G + GKGF+G Sbjct: 68 PRTGHFTKAGVTPRRHVVELRT-ADAGEYEVGQEVTAEVFEAGTVVDVVGTSKGKGFAGT 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G A+HG HR GS G PGRVFK +M+GRMG +RVT +NL+V V+ Sbjct: 127 MKRHGFRGQGASHGTQAVHRKPGSIGGCATPGRVFKGMRMSGRMGSDRVTTQNLKVHRVE 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 + GL+L+KG +PG K +LV+ K Sbjct: 187 GESGLLLIKGAIPGP-KGGLVLVKSPAK 213 >gi|153210324|ref|ZP_01947604.1| ribosomal protein L3 [Coxiella burnetii 'MSU Goat Q177'] gi|212218074|ref|YP_002304861.1| 50S ribosomal protein L3 [Coxiella burnetii CbuK_Q154] gi|226725156|sp|B6J5D2|RL3_COXB1 RecName: Full=50S ribosomal protein L3 gi|120575146|gb|EAX31770.1| ribosomal protein L3 [Coxiella burnetii 'MSU Goat Q177'] gi|212012336|gb|ACJ19716.1| LSU ribosomal protein L3P [Coxiella burnetii CbuK_Q154] Length = 217 Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 88/212 (41%), Positives = 126/212 (59%), Gaps = 1/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK GMT ++ G IPVTV+ + ++ +T++ +GY A QV G+ Sbjct: 1 MSIGLIGRKCGMTRIFTETGSSIPVTVVEVIPNRITQVKTVETDGYRAFQVAYGKKSSAR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G +S V L EFR+ ++ G F GQ+VDV G+T GKG Sbjct: 61 VNKPLAGHYSKAAVEAGNALREFRLGNEELTEAKAGDELKVDIFKEGQVVDVRGLTRGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRHNF ATHG S+SHR+ GS G Q PGRV+K KKMAG++G TV++ E+ Sbjct: 121 FAGTVKRHNFRTQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGQLGNVYCTVQSQEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 + VD +R L+L+KG +PGA I+ + S K Sbjct: 181 IKVDVERNLLLIKGALPGAPGGEVIITQSSKK 212 >gi|218440623|ref|YP_002378952.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 7424] gi|226725159|sp|B7KHY7|RL3_CYAP7 RecName: Full=50S ribosomal protein L3 gi|218173351|gb|ACK72084.1| ribosomal protein L3 [Cyanothece sp. PCC 7424] Length = 212 Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 89/202 (44%), Positives = 120/202 (59%), Gaps = 3/202 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT +++ E G IPVTV+H C + +T +GY ++Q+G GE K K Sbjct: 1 MSVGILGTKLGMTQIFDKETGIAIPVTVIHAGPCPITQVKTPATDGYNSIQIGYGEVKEK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G +P + L E+R++ D +G F G LVDV G TIG+G Sbjct: 61 ALNKPKLGHLKKSASTPVRHLKEYRLENAADYQ-LGDGIKVDLFKPGDLVDVAGKTIGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G KRHNF THG S +HR GSTG PGRV+ K+MAGR GG +VT++ L V Sbjct: 120 FAGYQKRHNFKRGSMTHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGRYGGTQVTIRKLTV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKN 201 V +D +R LIL+KG VPG N Sbjct: 179 VQIDTERNLILIKGAVPGKPGN 200 >gi|313888808|ref|ZP_07822469.1| 50S ribosomal protein L3 [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845177|gb|EFR32577.1| 50S ribosomal protein L3 [Peptoniphilus harei ACS-146-V-Sch2b] Length = 210 Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 86/198 (43%), Positives = 122/198 (61%), Gaps = 2/198 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 +V +K+GMT +++ EG PV+V+ ++ VV +T++ +GY A+QV E K + ++KP Sbjct: 4 LVGKKIGMTQIFDEEGIVTPVSVIEVEPNVVVQKKTIESDGYNAIQVATQEVKERRLNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +G V +K L EFR D + +G F VG+ VDV G + GKG +G + Sbjct: 64 EKGHLDKAGVGYRKHLSEFRTD-DVESYNLGDEIKVDLFEVGEHVDVVGTSKGKGTAGII 122 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHNFG R THG S HR G G PG+V+KN +MAG+MG RVTV+NLE+V +D Sbjct: 123 KRHNFGRGRETHG-SKFHRMPGGMGAASYPGKVWKNHRMAGKMGNERVTVQNLEIVRIDT 181 Query: 185 KRGLILVKGCVPGAKKNS 202 + LILVKG +PG KK + Sbjct: 182 DKNLILVKGAIPGPKKGT 199 >gi|219685094|ref|ZP_03539914.1| ribosomal protein L3 [Borrelia garinii Far04] gi|219673190|gb|EED30209.1| ribosomal protein L3 [Borrelia garinii Far04] Length = 206 Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 93/209 (44%), Positives = 129/209 (61%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ G IPVTV+ ++ +T+D++GY A+ G+ + K VSK Sbjct: 3 GLIGKKVGMTQIFQKNGIVIPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKDSKVSK 62 Query: 64 PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + S+ ++ PKK + E K D G F + VDVTG T GKGF G Sbjct: 63 PIKGQYKSLKDIEPKKYVIEL---KGLDGYDPGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNKQTIQNLEVVLI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D++ ILVKG VPGA K S+++V+ S K Sbjct: 179 DEENRAILVKGAVPGA-KGSFVVVKKSKK 206 >gi|189347703|ref|YP_001944232.1| 50S ribosomal protein L3 [Chlorobium limicola DSM 245] gi|226725145|sp|B3EGZ0|RL3_CHLL2 RecName: Full=50S ribosomal protein L3 gi|189341850|gb|ACD91253.1| ribosomal protein L3 [Chlorobium limicola DSM 245] Length = 209 Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 83/202 (41%), Positives = 125/202 (61%), Gaps = 1/202 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT +YN + I TV+ C V ++ +K+GY A Q+G GE K ++KP Sbjct: 4 ILGKKIGMTRLYNDKREAISCTVIQAGPCFVTQVKSAEKDGYDAYQIGIGERDEKKINKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M+G + V+P + EF+ + + L G+ S F G+ V+V G++ GKGF+G + Sbjct: 64 MQGHYRKAGVTPGFMMAEFKKTEFSENLEAGNPVSVESFKEGEKVNVLGVSKGKGFAGVV 123 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHNFGG THG S R+ GS G DP R F+ +MAGRMGG+ +TVKNLE+V + Sbjct: 124 KRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFRGTRMAGRMGGDNITVKNLEIVKIMP 183 Query: 185 KRGLILVKGCVPGAKKNSWILV 206 + L+++KG VPG KNS++ + Sbjct: 184 ESNLLVIKGAVPGP-KNSYVKI 204 >gi|228989319|ref|ZP_04149310.1| 50S ribosomal protein L3 [Bacillus pseudomycoides DSM 12442] gi|228995501|ref|ZP_04155169.1| 50S ribosomal protein L3 [Bacillus mycoides Rock3-17] gi|229003126|ref|ZP_04160972.1| 50S ribosomal protein L3 [Bacillus mycoides Rock1-4] gi|228758089|gb|EEM07288.1| 50S ribosomal protein L3 [Bacillus mycoides Rock1-4] gi|228764230|gb|EEM13109.1| 50S ribosomal protein L3 [Bacillus mycoides Rock3-17] gi|228770397|gb|EEM18970.1| 50S ribosomal protein L3 [Bacillus pseudomycoides DSM 12442] Length = 210 Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 94/211 (44%), Positives = 132/211 (62%), Gaps = 4/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGELIPVTVIAATPNVVLQKKTTETDGYNAIQLGFDDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + + +PK+ + E R D D L VG FT G++VDVTG++ GKGF Sbjct: 61 TNKPEQGHTAKASTTPKRFIREIR-DADVDGLEVGQEVKVEVFTAGEIVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH +HG S HR GS G P RVFK KK+AGRMGG++VT++NLE+V Sbjct: 120 QGVIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L+LVKG VPGAKK S ++V+ + K Sbjct: 178 QVDAERNLLLVKGNVPGAKK-SLVVVQGAVK 207 >gi|227505216|ref|ZP_03935265.1| 50S ribosomal protein L3 [Corynebacterium striatum ATCC 6940] gi|227198190|gb|EEI78238.1| 50S ribosomal protein L3 [Corynebacterium striatum ATCC 6940] Length = 218 Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 82/213 (38%), Positives = 121/213 (56%), Gaps = 2/213 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT +++ + R +PVTV+ C V RT + +GY A+Q+ GE + +K Sbjct: 8 GILGKKLGMTQIFDEDNRVVPVTVVEAGPCVVTQIRTAETDGYNAIQIAFGEIDPRKANK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ + E R+ D VG + F VDVTG T G G++GA Sbjct: 68 PAAGHFKKAGVTPRRHVAEIRMD-DTSAYEVGQEVTADIFEGITFVDVTGTTKGHGYAGA 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G A HG +HR G G P RVFK +MAGRMG +RVT +NL++ +D Sbjct: 127 MKRHGFAGQGAAHGNQAAHRRVGGIGACATPARVFKGTRMAGRMGQDRVTTQNLKIQKID 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 + L+L+KG +PGA + + V+ + K + Sbjct: 187 AESNLLLIKGAIPGA-RGGLVTVKTAVKGGAHA 218 >gi|171913926|ref|ZP_02929396.1| 50S ribosomal protein L3 [Verrucomicrobium spinosum DSM 4136] Length = 212 Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 93/211 (44%), Positives = 125/211 (59%), Gaps = 4/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT VY +G + VTV+ + QVV + DK+GY AVQVG E K Sbjct: 1 MSIGLIGKKVGMTQVYLKDGSAVAVTVIDVAGNQVVQVKNADKDGYTAVQVGYSEKKENR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SKP F N + K + EFR + + GS F G+ VDV G T GKGF Sbjct: 61 CSKPELEHFKKHNATAKYVVREFRT--EGEAPEAGSTLGADKFADGEYVDVIGTTKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG +KR+NF G A+HG S+ HR GS GCR PGRV+KN+KM GR G +R T +NL+VV Sbjct: 119 SGVVKRYNFKGQPASHG-SMMHRRTGSIGCRLTPGRVWKNQKMPGRHGFDRRTTQNLKVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 + G++L+ G VPG S+++VR + K Sbjct: 178 QSRAEDGVLLIAGAVPGP-NGSYVIVRPAIK 207 >gi|18146071|dbj|BAB82111.1| 50S ribosomal protein L3 [Clostridium perfringens str. 13] Length = 216 Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT +++ GR IPVTV+ C VV +T++ +GY A+QVG GE + K Sbjct: 8 MKKAIIGKKVGMTQIFDENGRVIPVTVVEAGPCVVVQKKTVETDGYDAIQVGFGELREKL 67 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G F+ VS ++ L EFR++ D VG F +G VDV+G++ GKGF Sbjct: 68 VNKPRKGHFAKAGVSLRRTLKEFRME-DVANYNVGDEIKVDTFEIGDKVDVSGVSKGKGF 126 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR N +HG S HR+ GS G DP R FKNK+M G MG TV NLEVV Sbjct: 127 QGTIKRWNASRGPMSHG-SKFHRAPGSMGAASDPSRTFKNKRMPGHMGAKNTTVLNLEVV 185 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + ++ +IL+KG +PG K + +++R+S K+ Sbjct: 186 KIMPEKNIILIKGGIPGPNKGT-VVIRNSVKA 216 >gi|315320564|ref|YP_004072621.1| 50S ribosomal protein L3 [Thalassiosira oceanica CCMP1005] gi|283569037|gb|ADB27574.1| 50S ribosomal protein L3 [Thalassiosira oceanica CCMP1005] Length = 207 Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 87/206 (42%), Positives = 122/206 (59%), Gaps = 2/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT +++ G IPVT+L + C V +T +GY A+QVG G K+ Sbjct: 1 MSLGLLGNKIGMTQIFDESGNIIPVTILKVGPCIVTQVKTTLNDGYNAIQVGYGNVSTKS 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G N+ P K L EFRV + D VG V + F GQL++VTG +IGKGF Sbjct: 61 LTQPQLGHLQKSNIQPLKYLKEFRVNEPAD-FSVGQVLNVDSFIEGQLINVTGKSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KR+NF THG S +HR+ GS G DPGRV KKMAG++G +K L++V Sbjct: 120 SGLQKRYNFSRGPMTHG-SKNHRAPGSIGMGTDPGRVLPGKKMAGQLGNKMTNIKKLKIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 V++ +++VKG VPG N +V Sbjct: 179 QVNNNENILVVKGAVPGKPGNLLSIV 204 >gi|15805340|ref|NP_294034.1| 50S ribosomal protein L3 [Deinococcus radiodurans R1] gi|42559707|sp|Q9RXK2|RL3_DEIRA RecName: Full=50S ribosomal protein L3 gi|28948921|pdb|1NKW|B Chain B, Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans gi|29726789|pdb|1NWX|B Chain B, Complex Of The Large Ribosomal Subunit From Deinococcus Radiodurans With Abt-773 gi|29726820|pdb|1NWY|B Chain B, Complex Of The Large Ribosomal Subunit From Deinococcus Radiodurans With Azithromycin gi|51247374|pdb|1SM1|B Chain B, Complex Of The Large Ribosomal Subunit From Deinococcus Radiodurans With Quinupristin And Dalfopristin gi|61680337|pdb|1XBP|B Chain B, Inhibition Of Peptide Bond Formation By Pleuromutilins: The Structure Of The 50s Ribosomal Subunit From Deinococcus Radiodurans In Complex With Tiamulin gi|146386617|pdb|2OGM|B Chain B, The Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans Complexed With The Pleuromutilin Derivative Sb-571519 gi|146386619|pdb|2OGN|B Chain B, The Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans Complexed With The Pleuromutilin Derivative Sb-280080 gi|146386621|pdb|2OGO|B Chain B, The Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans Complexed With The Pleuromutilin Derivative Retapamulin (Sb-275833) gi|190613491|pdb|2ZJP|B Chain B, Thiopeptide Antibiotic Nosiheptide Bound To The Large Ribosomal Subunit Of Deinococcus Radiodurans gi|190613521|pdb|2ZJQ|B Chain B, Interaction Of L7 With L11 Induced By Microccocin Binding To The Deinococcus Radiodurans 50s Subunit gi|190613552|pdb|2ZJR|B Chain B, Refined Native Structure Of The Large Ribosomal Subunit (50s) From Deinococcus Radiodurans gi|190613659|pdb|3CF5|B Chain B, Thiopeptide Antibiotic Thiostrepton Bound To The Large Ribosomal Subunit Of Deinococcus Radiodurans gi|203282458|pdb|3DLL|B Chain B, The Oxazolidinone Antibiotics Perturb The Ribosomal Peptidyl-Transferase Center And Effect Trna Positioning gi|323714542|pdb|3PIO|B Chain B, Crystal Structure Of The Synergistic Antibiotic Pair Lankamycin And Lankacidin In Complex With The Large Ribosomal Subunit gi|323714572|pdb|3PIP|B Chain B, Crystal Structure Of The Synergistic Antibiotic Pair Lankamycin And Lankacidin In Complex With The Large Ribosomal Subunit gi|6457985|gb|AAF09892.1|AE001892_3 ribosomal protein L3 [Deinococcus radiodurans R1] Length = 211 Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 87/195 (44%), Positives = 115/195 (58%), Gaps = 6/195 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ K+GMT ++ + R IPVTV+ C +V +T +GY AVQ+G + V+K Sbjct: 3 GILGTKIGMTQIWKND-RAIPVTVVLAGPCPIVQRKTAQTDGYEAVQIGYAPKAERKVNK 61 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 PM+G F+ V+P + L EFR P G + F G+ +D TG + GKG G Sbjct: 62 PMQGHFAKAGVAPTRILREFR-----GFAPDGDSVNVDIFAEGEKIDATGTSKGKGTQGV 116 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR NF G A+HG HR GS G R+ PGRV+K K+MAG MG RVTV+NLEVV + Sbjct: 117 MKRWNFAGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGHMGMERVTVQNLEVVEIR 176 Query: 184 DKRGLILVKGCVPGA 198 LILVKG +PGA Sbjct: 177 AGENLILVKGAIPGA 191 >gi|170757219|ref|YP_001783121.1| 50S ribosomal protein L3 [Clostridium botulinum B1 str. Okra] gi|226725153|sp|B1IGF4|RL3_CLOBK RecName: Full=50S ribosomal protein L3 gi|169122431|gb|ACA46267.1| 50S ribosomal protein L3 [Clostridium botulinum B1 str. Okra] Length = 209 Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 85/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +KLGMT ++N G+ IPVTV+ C V+ +T++K+GY A+QV G+ + K Sbjct: 1 MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP++G F+ VS K+ + EF+++ D + L +G F G+ VD++G++ GKGF Sbjct: 61 RNKPVKGHFAKAGVSVKRHIKEFKLE-DSNSLEIGQEIKADVFEAGERVDISGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G ++R N +HG S HR+ GS G DP R FKNK+M G MG TV NLEVV Sbjct: 120 QGTIRRWNAHRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + ++ LIL+KG VPG K + +R++ K+ Sbjct: 179 KIIPEKNLILIKGGVPGPNK-GLVQIRNTVKA 209 >gi|261415819|ref|YP_003249502.1| 50S ribosomal protein L3 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372275|gb|ACX75020.1| 50S ribosomal protein L3 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326929|gb|ADL26130.1| ribosomal protein L3 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 205 Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 92/205 (44%), Positives = 126/205 (61%), Gaps = 3/205 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 +G++A+KLGMT V+ +G +PVTVL C VV H+T +K+GY AVQ+G G K + + Sbjct: 2 NGILAKKLGMTQVFTEQGECVPVTVLEAGPCVVVCHKTEEKDGYTAVQIGFGLKKEQRAN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F +V+ ++ L EF V D + PVG F + F + V+V+G++ G GFSG Sbjct: 62 KAEVGHFKKADVAVREHLAEFDVA-DLESWPVGKEFGAADFADAKTVNVSGISKGHGFSG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH F +HG + R G T PGRVF K+MAG+ G +VTVK+L+VV V Sbjct: 121 TIKRHGFHSGPRSHGTH-NMREPGGTSAHSYPGRVFPGKRMAGQYGNKKVTVKHLQVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 D R LI V+G VPG KNS I+VR Sbjct: 180 DGDRNLIFVRGAVPGP-KNSIIVVR 203 >gi|15674287|ref|NP_268460.1| 50S ribosomal protein L3 [Streptococcus pyogenes M1 GAS] gi|42559685|sp|Q9A1X4|RL3_STRP1 RecName: Full=50S ribosomal protein L3 gi|13621367|gb|AAK33182.1| 50S ribosomal protein L3 [Streptococcus pyogenes M1 GAS] Length = 208 Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 95/213 (44%), Positives = 133/213 (62%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ S F G +VDVTG++ GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFEAGDVVDVTGISKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVTV+NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +ILVKG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILVKGNVPGAKK-SLITIKSAVKAA 207 >gi|15594823|ref|NP_212612.1| 50S ribosomal protein L3 [Borrelia burgdorferi B31] gi|195941615|ref|ZP_03086997.1| 50S ribosomal protein L3 [Borrelia burgdorferi 80a] gi|216264833|ref|ZP_03436825.1| ribosomal protein L3 [Borrelia burgdorferi 156a] gi|218249534|ref|YP_002374988.1| ribosomal protein L3 [Borrelia burgdorferi ZS7] gi|221218185|ref|ZP_03589651.1| ribosomal protein L3 [Borrelia burgdorferi 72a] gi|223888933|ref|ZP_03623524.1| ribosomal protein L3 [Borrelia burgdorferi 64b] gi|224532529|ref|ZP_03673154.1| ribosomal protein L3 [Borrelia burgdorferi WI91-23] gi|224533652|ref|ZP_03674241.1| ribosomal protein L3 [Borrelia burgdorferi CA-11.2a] gi|225549667|ref|ZP_03770633.1| ribosomal protein L3 [Borrelia burgdorferi 118a] gi|226321788|ref|ZP_03797314.1| ribosomal protein L3 [Borrelia burgdorferi Bol26] gi|226725136|sp|B7J243|RL3_BORBZ RecName: Full=50S ribosomal protein L3 gi|2688413|gb|AAC66864.1| ribosomal protein L3 (rplC) [Borrelia burgdorferi B31] gi|215981306|gb|EEC22113.1| ribosomal protein L3 [Borrelia burgdorferi 156a] gi|218164722|gb|ACK74783.1| ribosomal protein L3 [Borrelia burgdorferi ZS7] gi|221192133|gb|EEE18354.1| ribosomal protein L3 [Borrelia burgdorferi 72a] gi|223885749|gb|EEF56848.1| ribosomal protein L3 [Borrelia burgdorferi 64b] gi|224512601|gb|EEF82977.1| ribosomal protein L3 [Borrelia burgdorferi WI91-23] gi|224513325|gb|EEF83687.1| ribosomal protein L3 [Borrelia burgdorferi CA-11.2a] gi|225369944|gb|EEG99391.1| ribosomal protein L3 [Borrelia burgdorferi 118a] gi|226232977|gb|EEH31730.1| ribosomal protein L3 [Borrelia burgdorferi Bol26] gi|312148184|gb|ADQ30843.1| ribosomal protein L3 [Borrelia burgdorferi JD1] Length = 206 Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 90/209 (43%), Positives = 130/209 (62%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ G +PVTV+ ++ +T+D++GY A+ G+ + K VSK Sbjct: 3 GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKVSK 62 Query: 64 PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + S+ ++ PK+ + E K D G F + VDVTG T GKGF G Sbjct: 63 PIKGQYKSLKDIEPKRYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D+++ +LVKG VPGA K S+++V+ S K Sbjct: 179 DEEKRALLVKGAVPGA-KGSFVVVKKSKK 206 >gi|29653590|ref|NP_819282.1| LSU ribosomal protein L3P [Coxiella burnetii RSA 493] gi|161830671|ref|YP_001596185.1| 50S ribosomal protein L3 [Coxiella burnetii RSA 331] gi|212213250|ref|YP_002304186.1| 50S ribosomal protein L3 [Coxiella burnetii CbuG_Q212] gi|42559616|sp|Q83ES4|RL3_COXBU RecName: Full=50S ribosomal protein L3 gi|189042841|sp|A9NAM4|RL3_COXBR RecName: Full=50S ribosomal protein L3 gi|226725157|sp|B6J263|RL3_COXB2 RecName: Full=50S ribosomal protein L3 gi|29540852|gb|AAO89796.1| LSU ribosomal protein L3P [Coxiella burnetii RSA 493] gi|161762538|gb|ABX78180.1| ribosomal protein L3 [Coxiella burnetii RSA 331] gi|212011660|gb|ACJ19041.1| LSU ribosomal protein L3P [Coxiella burnetii CbuG_Q212] Length = 217 Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 88/212 (41%), Positives = 126/212 (59%), Gaps = 1/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK GMT ++ G IPVTV+ + ++ +T++ +GY A QV G+ Sbjct: 1 MSIGLIGRKCGMTRIFTETGSSIPVTVVEVILNRITQVKTVETDGYRAFQVAYGKKSSAR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G +S V L EFR+ ++ G F GQ+VDV G+T GKG Sbjct: 61 VNKPLAGHYSKAAVEAGNALREFRLGNEELTEAKAGDELKVDIFKEGQVVDVRGLTRGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRHNF ATHG S+SHR+ GS G Q PGRV+K KKMAG++G TV++ E+ Sbjct: 121 FAGTVKRHNFRTQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGQLGNVYCTVQSQEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 + VD +R L+L+KG +PGA I+ + S K Sbjct: 181 IKVDVERNLLLIKGALPGAPGGEVIITQSSKK 212 >gi|168187814|ref|ZP_02622449.1| ribosomal protein L3 [Clostridium botulinum C str. Eklund] gi|169294352|gb|EDS76485.1| ribosomal protein L3 [Clostridium botulinum C str. Eklund] Length = 209 Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 86/212 (40%), Positives = 130/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ RK+GMT +++ G+ IPVTV+ C V+ ++ +K+GY A+QVG + + K Sbjct: 1 MKKAIIGRKIGMTQIFDENGKVIPVTVVEAGPCAVLQKKSEEKDGYNAIQVGFEDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G F+ VS K+ + EFR++ D+ VG+ F G VDVTG++ GKGF Sbjct: 61 ANKPKKGHFAKAGVSLKRIVKEFRLENIDE-YEVGTEIKADVFEAGDKVDVTGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF HG S HR+ GS G DP R FKNKKM G MG + TV N+EVV Sbjct: 120 QGTIKRWNFHRGPMAHG-SKYHRAVGSMGAASDPSRTFKNKKMPGHMGNKKSTVLNIEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V + ++L+KG +PG K +++++D+ K+ Sbjct: 179 KVMADKNVLLIKGGIPGPNK-GYVVIKDTVKA 209 >gi|148381421|ref|YP_001255962.1| ribosomal protein L3 [Clostridium botulinum A str. ATCC 3502] gi|153932935|ref|YP_001385796.1| 50S ribosomal protein L3 [Clostridium botulinum A str. ATCC 19397] gi|153937726|ref|YP_001389203.1| 50S ribosomal protein L3 [Clostridium botulinum A str. Hall] gi|166233132|sp|A7FZ69|RL3_CLOB1 RecName: Full=50S ribosomal protein L3 gi|166233133|sp|A5I7K6|RL3_CLOBH RecName: Full=50S ribosomal protein L3 gi|148290905|emb|CAL85041.1| 50S ribosomal protein L3 [Clostridium botulinum A str. ATCC 3502] gi|152928979|gb|ABS34479.1| 50S ribosomal protein L3 [Clostridium botulinum A str. ATCC 19397] gi|152933640|gb|ABS39139.1| 50S ribosomal protein L3 [Clostridium botulinum A str. Hall] Length = 209 Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 85/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +KLGMT ++N G+ IPVTV+ C V+ +T++K+GY A+QV G+ + K Sbjct: 1 MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP++G F+ VS K+ + EF+++ D + L +G F G+ VD++G++ GKGF Sbjct: 61 RNKPIKGHFAKAGVSVKRHIKEFKLE-DSNSLEIGQEIKADVFEAGERVDISGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G ++R N +HG S HR+ GS G DP R FKNK+M G MG TV NLEVV Sbjct: 120 QGTIRRWNAHRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + ++ LIL+KG VPG K + +R++ K+ Sbjct: 179 RIIPEKNLILIKGGVPGPNK-GLVQIRNTVKA 209 >gi|258651363|ref|YP_003200519.1| 50S ribosomal protein L3 [Nakamurella multipartita DSM 44233] gi|258554588|gb|ACV77530.1| ribosomal protein L3 [Nakamurella multipartita DSM 44233] Length = 220 Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 97/218 (44%), Positives = 124/218 (56%), Gaps = 7/218 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ V RT + +GY AVQ G + V+K Sbjct: 7 GILGHKLGMTQVFDEANRVVPVTVVAAGPVVVTAVRTPETDGYSAVQFAFGAVDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSG 122 P G F V+P++ L E R D VG + + F G +VDVTG + GKG +G Sbjct: 67 PAAGQFVKAGVTPRRHLVELRTD-DVSGYSVGQELTAAEVFDAGAVVDVTGTSKGKGTAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F GL A HGV HRS GS G PGRVFK +MAGRMG +VTV+NL V +V Sbjct: 126 VMKRHGFAGLGAGHGVQRKHRSPGSIGGCSTPGRVFKGLRMAGRMGNAKVTVQNLTVHAV 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220 D RGL+L+ G VPG K ++ KSAV + KV Sbjct: 186 DADRGLVLINGAVPGPKGGLVMI-----KSAVKNQSKV 218 >gi|152973956|ref|YP_001373473.1| 50S ribosomal protein L3 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189042831|sp|A7GK20|RL3_BACCN RecName: Full=50S ribosomal protein L3 gi|152022708|gb|ABS20478.1| ribosomal protein L3 [Bacillus cytotoxicus NVH 391-98] Length = 210 Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 92/213 (43%), Positives = 133/213 (62%), Gaps = 4/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGELIPVTVIEATPNVVLQKKTTETDGYNAIQLGFEDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + + +PK+ + E R D D L VG F G+ VDVTG++ GKGF Sbjct: 61 ANKPEQGHVAKASTAPKRFIREIR-DADVDGLEVGQEVKVEVFAAGETVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH +HG S HR GS G P RVFK KK+AGRMGG+++T++NLE+V Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQITIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD +R L+L+KG VPGAKK S ++V+ + K++ Sbjct: 178 QVDVERNLLLIKGNVPGAKK-SLVVVQGAVKAS 209 >gi|121608243|ref|YP_996050.1| 50S ribosomal protein L3 [Verminephrobacter eiseniae EF01-2] gi|166234606|sp|A1WHC5|RL3_VEREI RecName: Full=50S ribosomal protein L3 gi|121552883|gb|ABM57032.1| LSU ribosomal protein L3P [Verminephrobacter eiseniae EF01-2] Length = 224 Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 86/211 (40%), Positives = 127/211 (60%), Gaps = 3/211 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G +PVTV+ + + +V +T + +GY+A+QV G K VSK Sbjct: 8 GLLGRKVGMMRLFTDDGDAVPVTVVDVSDNRVTQVKTQENDGYVALQVTFGARKASRVSK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 P G + V + + EFRV D SV S F+VGQ VDV G +IGKG++ Sbjct: 68 PEAGHLAKAGVQAGEIIQEFRVSADTAAQYQAGASVAITSVFSVGQKVDVQGTSIGKGYA 127 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHN RA+HG S SH GS G QDPGRVF K+M G +G T +NL+++ Sbjct: 128 GTIKRHNMRSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDATRTTQNLDLIR 187 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D+ R L+L+KG +PG+ K ++ VR + +S Sbjct: 188 IDEARQLLLIKGAIPGS-KGGFVTVRPAVRS 217 >gi|291613236|ref|YP_003523393.1| 50S ribosomal protein L3 [Sideroxydans lithotrophicus ES-1] gi|291583348|gb|ADE11006.1| 50S ribosomal protein L3 [Sideroxydans lithotrophicus ES-1] Length = 214 Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 92/213 (43%), Positives = 125/213 (58%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G +PVTVL + N +V +T +GY AVQV G + Sbjct: 1 MSLGLVGRKIGMTRIFTDDGTSLPVTVLDVSNNRVTQIKTAATDGYSAVQVAYGTRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V L EF + L +G F VGQ VDVTG+TIGKG Sbjct: 61 VTKAAAGHFAKAGVEAGSVLKEFTATPEQLSSLTLGGKVGVDMFQVGQKVDVTGVTIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR++F RATHG S SH GS G QDPGRVF K+M G +G + TV+NL++ Sbjct: 121 YAGTIKRYHFKSGRATHGNSKSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVQRTVQNLKI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V +D R L+LV G VPGA ++VR + K+ Sbjct: 181 VRIDADRQLLLVMGAVPGAPGGD-VIVRPAVKA 212 >gi|225016285|ref|ZP_03705477.1| hypothetical protein CLOSTMETH_00188 [Clostridium methylpentosum DSM 5476] gi|224950960|gb|EEG32169.1| hypothetical protein CLOSTMETH_00188 [Clostridium methylpentosum DSM 5476] Length = 211 Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 84/213 (39%), Positives = 126/213 (59%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT +++ G+ IPVTV+ C VV +T++ +GY AVQVG + K Sbjct: 1 MKKAIIGKKVGMTQIFDENGKVIPVTVVEAGPCVVVQKKTVENDGYEAVQVGFSDLKPHK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP G F+ + +PK+ L EFR++ D L +G + F G +VDV G + GKGF Sbjct: 61 VNKPTAGHFAKADAAPKRHLKEFRLE-DCASLNLGDLIKADVFAEGDIVDVCGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR+ L+A+HG R GS G DP R+ K KKM G+MG VT++NL VV Sbjct: 120 AGTIKRYGNASLKASHGTGPVGRHAGSMGAASDPSRIPKGKKMPGQMGNETVTIQNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + LI ++G +PG + + +S K A Sbjct: 180 KVDAENNLIALRGAIPGP-NGGIVTIANSVKKA 211 >gi|258512670|ref|YP_003186104.1| 50S ribosomal protein L3 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479396|gb|ACV59715.1| 50S ribosomal protein L3 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 211 Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 91/209 (43%), Positives = 125/209 (59%), Gaps = 4/209 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT V+ +G +PVTV+ C V+ R LDK+GY A+Q+G + K +K Sbjct: 3 GILGRKLGMTQVFTEDGDVVPVTVIEAGPCVVLQKRVLDKDGYEAIQLGFADKKASRATK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G + +PK+ + E R ++ VG F G +VDVTG++ GKGF+G Sbjct: 63 PEIGHAAKAGTAPKRYIREIRGVNVEE-YEVGQQLKADIFAPGDMVDVTGVSKGKGFAGP 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KRHN HG S HR GS G P R FK + MAGRMGG RVTV+NLEVV VD Sbjct: 122 IKRHNQHRGPMAHG-SKYHRGVGSLGSIA-PNRTFKGQTMAGRMGGERVTVQNLEVVKVD 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 ++ +IL+KG VPG +NS++ +R + K Sbjct: 180 PEKNVILIKGSVPGP-RNSFVTIRSAVKQ 207 >gi|168334352|ref|ZP_02692539.1| 50S ribosomal protein L3 [Epulopiscium sp. 'N.t. morphotype B'] Length = 211 Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 90/213 (42%), Positives = 123/213 (57%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A+K+GMT +++ IPVTVL C VV +T + +GY A+QVG K K Sbjct: 1 MKKAIMAKKIGMTQIFDENANLIPVTVLEAGPCTVVQKKTKENDGYEAIQVGFINKKEKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V KP G F V PKK L EFR D VG F G VDV G+T GKG+ Sbjct: 61 VIKPEAGHFEKAGVEPKKYLKEFRFD-DCSAFEVGGEIKAEVFVKGDKVDVAGVTKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 + ++K++ + HG S HR GS G +PGRV K K + RMGG+ VT++NLE+V Sbjct: 120 TSSIKKYGYSRGPMAHG-SKYHRHAGSMGAATNPGRVMKGKGLPSRMGGDNVTIQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + LIL+KGCVPG K + + V++S K + Sbjct: 179 RVDADKNLILIKGCVPGP-KGTVVTVKNSVKHS 210 >gi|153940129|ref|YP_001392834.1| 50S ribosomal protein L3 [Clostridium botulinum F str. Langeland] gi|168178832|ref|ZP_02613496.1| ribosomal protein L3 [Clostridium botulinum NCTC 2916] gi|170758623|ref|YP_001788821.1| 50S ribosomal protein L3 [Clostridium botulinum A3 str. Loch Maree] gi|166233134|sp|A7GJ74|RL3_CLOBL RecName: Full=50S ribosomal protein L3 gi|226725154|sp|B1KSM5|RL3_CLOBM RecName: Full=50S ribosomal protein L3 gi|152936025|gb|ABS41523.1| 50S ribosomal protein L3 [Clostridium botulinum F str. Langeland] gi|169405612|gb|ACA54023.1| 50S ribosomal protein L3 [Clostridium botulinum A3 str. Loch Maree] gi|182670248|gb|EDT82224.1| ribosomal protein L3 [Clostridium botulinum NCTC 2916] gi|295320814|gb|ADG01192.1| 50S ribosomal protein L3 [Clostridium botulinum F str. 230613] Length = 209 Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 85/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +KLGMT ++N G+ IPVTV+ C V+ +T++K+GY A+QV G+ + K Sbjct: 1 MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP++G F+ VS K+ + EF+++ D + L +G F G+ VD++G++ GKGF Sbjct: 61 RNKPVKGHFAKAGVSVKRHIKEFKLE-DSNSLEIGQEIKADVFEAGERVDISGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G ++R N +HG S HR+ GS G DP R FKNK+M G MG TV NLEVV Sbjct: 120 QGTIRRWNAHRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + ++ LIL+KG VPG K + +R++ K+ Sbjct: 179 RIIPEKNLILIKGGVPGPNK-GLVQIRNTVKA 209 >gi|212550451|ref|YP_002308768.1| 50S ribosomal protein L3 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|226725128|sp|B6YQ85|RL3_AZOPC RecName: Full=50S ribosomal protein L3 gi|212548689|dbj|BAG83357.1| 50S ribosomal protein L3 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 204 Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 87/203 (42%), Positives = 126/203 (62%), Gaps = 4/203 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++++EG+ +P TV+ + C V +T+DK+GY AVQVG + K K+ +K Sbjct: 3 GLIGKKIGMTSIFSVEGKNLPCTVMEVGPCVVTQVKTVDKDGYEAVQVGFEDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P RG F VS K+ L EF K+ G V + +F G VDV G++ GKGF G Sbjct: 63 PERGHFKRAGVSFKRYLAEF---KEQGKYKEGDVITVDFFNKGIYVDVVGISKGKGFQGV 119 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH F G+ AT G S R GS G P +VFK +MAG+MG +VT++NLEV+ + Sbjct: 120 VKRHGFRGVGEATLGQSDRQRHPGSIGACSYPAKVFKGTRMAGQMGNTKVTIQNLEVIEL 179 Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205 K L++VKG VPG+K + I+ Sbjct: 180 ISKYNLLIVKGSVPGSKGSILIV 202 >gi|194334861|ref|YP_002016721.1| 50S ribosomal protein L3 [Prosthecochloris aestuarii DSM 271] gi|226730548|sp|B4S5M7|RL3_PROA2 RecName: Full=50S ribosomal protein L3 gi|194312679|gb|ACF47074.1| ribosomal protein L3 [Prosthecochloris aestuarii DSM 271] Length = 209 Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 86/204 (42%), Positives = 120/204 (58%), Gaps = 1/204 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 + ++ +K+GMT +YN + +P TV+ C V +T D +GY A Q+ GE K VS Sbjct: 2 AAILGKKIGMTRIYNEKREAVPCTVIQAAPCFVSQVKTSDNDGYEAYQLSIGERKEAKVS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KPMRG ++ ++P K+ EF D L +GS S F G VDV G+T GKGF+G Sbjct: 62 KPMRGHYAKAGITPGYKIAEFGKDLMDADLELGSSVSVDMFKEGDKVDVRGVTKGKGFAG 121 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHNF G THG S R+ GS G DP R FK +MAGRMG V V+ L++V + Sbjct: 122 VVKRHNFAGGSRTHGQSDRLRAPGSVGGSSDPSRTFKGMRMAGRMGSKNVKVRGLQIVKI 181 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 + L+++KG VPG KNS++ + Sbjct: 182 IPESNLLVIKGSVPGV-KNSYVEI 204 >gi|222099967|ref|YP_002534535.1| 50S ribosomal protein L3 [Thermotoga neapolitana DSM 4359] gi|221572357|gb|ACM23169.1| 50S ribosomal protein L3 [Thermotoga neapolitana DSM 4359] Length = 210 Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 93/205 (45%), Positives = 124/205 (60%), Gaps = 6/205 (2%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RK+GMT V+ I +PVTV+ C VV +T++ +GY AVQ+G K K V+KP Sbjct: 7 IIGRKIGMTRVF-IGNEAVPVTVIKAGPCVVVQKKTVETDGYNAVQLGF--EKAKKVNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + G F V P + L EFRV D+ P G V F G+ VDVTG + G+GF+GAM Sbjct: 64 LAGHFKKFGVEPMRVLREFRVDNPDEYEP-GQVIKVDIFEKGEYVDVTGWSKGRGFAGAM 122 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR F G +HG S HR GS G +P +++K KKM GR G RVTV+NL+VV VD Sbjct: 123 KRWGFSGGPKSHG-SKFHRELGSVGQHTEPAKIWKGKKMPGRYGNERVTVRNLQVVDVDP 181 Query: 185 KRGLILVKGCVPGAKKNSWILVRDS 209 + LI VKG VPGA + +L+R + Sbjct: 182 ENDLIAVKGGVPGA-RGGLVLIRSA 205 >gi|163938118|ref|YP_001643002.1| 50S ribosomal protein L3 [Bacillus weihenstephanensis KBAB4] gi|218895245|ref|YP_002443656.1| ribosomal protein L3 [Bacillus cereus G9842] gi|228970299|ref|ZP_04130958.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|229053956|ref|ZP_04195390.1| 50S ribosomal protein L3 [Bacillus cereus AH603] gi|229131118|ref|ZP_04260030.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST196] gi|226725130|sp|B7IT19|RL3_BACC2 RecName: Full=50S ribosomal protein L3 gi|226725133|sp|A9VP77|RL3_BACWK RecName: Full=50S ribosomal protein L3 gi|163860315|gb|ABY41374.1| ribosomal protein L3 [Bacillus weihenstephanensis KBAB4] gi|218544022|gb|ACK96416.1| ribosomal protein L3 [Bacillus cereus G9842] gi|228652331|gb|EEL08256.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST196] gi|228721374|gb|EEL72895.1| 50S ribosomal protein L3 [Bacillus cereus AH603] gi|228789408|gb|EEM37328.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|326937905|gb|AEA13801.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar chinensis CT-43] Length = 210 Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 93/211 (44%), Positives = 132/211 (62%), Gaps = 4/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ + V+ +T + +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGELIPVTVIAANPNVVLQKKTTETDGYNAIQLGFEDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + + +PK+ + E R D D L VG F G++VDVTG++ GKGF Sbjct: 61 TNKPEQGHTAKASTTPKRFIREIR-DADVDGLEVGQEVKVEVFAAGEIVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH +HG S HR GS G P RVFK KK+AGRMGG++VT++NLE+V Sbjct: 120 QGVIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L+LVKG VPGAKK S ++V+ + K Sbjct: 178 QVDTERNLLLVKGNVPGAKK-SLVVVQGAVK 207 >gi|126697640|ref|YP_001086537.1| 50S ribosomal protein L3 [Clostridium difficile 630] gi|254973731|ref|ZP_05270203.1| 50S ribosomal protein L3 [Clostridium difficile QCD-66c26] gi|255091120|ref|ZP_05320598.1| 50S ribosomal protein L3 [Clostridium difficile CIP 107932] gi|255099232|ref|ZP_05328209.1| 50S ribosomal protein L3 [Clostridium difficile QCD-63q42] gi|255305015|ref|ZP_05349187.1| 50S ribosomal protein L3 [Clostridium difficile ATCC 43255] gi|255312775|ref|ZP_05354358.1| 50S ribosomal protein L3 [Clostridium difficile QCD-76w55] gi|255515534|ref|ZP_05383210.1| 50S ribosomal protein L3 [Clostridium difficile QCD-97b34] gi|255648629|ref|ZP_05395531.1| 50S ribosomal protein L3 [Clostridium difficile QCD-37x79] gi|255654162|ref|ZP_05399571.1| 50S ribosomal protein L3 [Clostridium difficile QCD-23m63] gi|260681846|ref|YP_003213131.1| 50S ribosomal protein L3 [Clostridium difficile CD196] gi|260685444|ref|YP_003216577.1| 50S ribosomal protein L3 [Clostridium difficile R20291] gi|296449799|ref|ZP_06891568.1| 50S ribosomal protein L3 [Clostridium difficile NAP08] gi|296877863|ref|ZP_06901885.1| 50S ribosomal protein L3 [Clostridium difficile NAP07] gi|306518752|ref|ZP_07405099.1| 50S ribosomal protein L3 [Clostridium difficile QCD-32g58] gi|123174670|sp|Q18CG0|RL3_CLOD6 RecName: Full=50S ribosomal protein L3 gi|115249077|emb|CAJ66888.1| 50S ribosomal protein L3 [Clostridium difficile] gi|260208009|emb|CBA60186.1| 50S ribosomal protein L3 [Clostridium difficile CD196] gi|260211460|emb|CBE01579.1| 50S ribosomal protein L3 [Clostridium difficile R20291] gi|296261397|gb|EFH08223.1| 50S ribosomal protein L3 [Clostridium difficile NAP08] gi|296431163|gb|EFH16988.1| 50S ribosomal protein L3 [Clostridium difficile NAP07] Length = 209 Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 94/208 (45%), Positives = 128/208 (61%), Gaps = 4/208 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ +G IPVT + V +T+DK+GY A+Q+G +AK K ++K Sbjct: 3 GILGKKVGMTQIFTDKGVVIPVTAVEAGPMVVTQIKTVDKDGYNAIQIGFEDAKEKALNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G ++ NV KK L EFRV + VG F G +DVTG++ GKGF G Sbjct: 63 PKKGHLAAANVL-KKHLKEFRVDSVEGYT-VGQEIKADVFEAGAKIDVTGISKGKGFQGP 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KRH THG S HR GS G PGRVFKNKK+AG MG +VTV+NLEVV VD Sbjct: 121 IKRHGQSRGPETHG-SRYHRRPGSMGACSYPGRVFKNKKLAGHMGSVKVTVQNLEVVKVD 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 + LILVKG +PGA K S + ++++ K Sbjct: 180 ADKNLILVKGAIPGA-KGSVVTIKEAIK 206 >gi|38233085|ref|NP_938852.1| 50S ribosomal protein L3 [Corynebacterium diphtheriae NCTC 13129] gi|42559574|sp|P60453|RL3_CORDI RecName: Full=50S ribosomal protein L3 gi|38199344|emb|CAE48977.1| 50S ribosomal protein L3 [Corynebacterium diphtheriae] Length = 218 Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 84/198 (42%), Positives = 117/198 (59%), Gaps = 5/198 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT +++ + R IPVTV+ C V RT++ +GY A+Q+ GE + +K Sbjct: 8 GILGTKLGMTQIFDEDNRVIPVTVVEAGPCVVTQIRTVETDGYNAIQIAYGEIDPRKANK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 P G F V+P++ + E R+ DD+ +G + F VDVTG T GKG++ Sbjct: 68 PAAGHFKKAGVTPRRHVAEIRM---DDVSGYELGQDVTVEIFEGINFVDVTGTTKGKGYA 124 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 GAMKRH F G A HG +HR G G PGRVFK +MAGRMG +RVT +NL+V Sbjct: 125 GAMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGSDRVTTQNLKVQK 184 Query: 182 VDDKRGLILVKGCVPGAK 199 +D LIL+KG +PG + Sbjct: 185 IDADANLILIKGAIPGVR 202 >gi|302543361|ref|ZP_07295703.1| 50S ribosomal protein L3 [Streptomyces hygroscopicus ATCC 53653] gi|302460979|gb|EFL24072.1| 50S ribosomal protein L3 [Streptomyces himastatinicus ATCC 53653] Length = 214 Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 98/210 (46%), Positives = 127/210 (60%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ KLGMT V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+K Sbjct: 7 GVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTDDADGYDAVQIAFGEIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ +V+P++ L E R D +G + F G VDVTG + GKG +G Sbjct: 67 PLKGHFAKADVTPRRHLVELRTA-DASEYTLGQEVTAEAFESGVKVDVTGTSKGKGTAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH FGGL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +VD Sbjct: 126 MKRHGFGGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+KG VPG +LVR + K A Sbjct: 186 AEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214 >gi|67923583|ref|ZP_00517055.1| Ribosomal protein L3 [Crocosphaera watsonii WH 8501] gi|67854553|gb|EAM49840.1| Ribosomal protein L3 [Crocosphaera watsonii WH 8501] Length = 213 Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 88/198 (44%), Positives = 118/198 (59%), Gaps = 3/198 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT ++ E G IPVTV+ C + +T + +GY AVQ+G E K K Sbjct: 1 MSVGLLGTKLGMTQIFEEESGLAIPVTVVQAGPCTITQIKTTETDGYSAVQLGYLEVKEK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G VN SP + L E+RV+ D +G F+ G LVDV+G ++G+G Sbjct: 61 ALTKPELGHLKKVNASPLRHLKEYRVE-DTASYQLGEAVKADIFSTGDLVDVSGTSMGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G KRHNF THG S +HR GSTG PGRV+ KKMAG+ G + T + L V Sbjct: 120 FAGYQKRHNFKRGNMTHG-SKNHRLPGSTGAGTTPGRVYPGKKMAGQYGAAKTTTRKLTV 178 Query: 180 VSVDDKRGLILVKGCVPG 197 V VD +R L+L+KG VPG Sbjct: 179 VRVDTERNLLLIKGAVPG 196 >gi|322807806|emb|CBZ05381.1| LSU ribosomal protein L3p (L3e) [Clostridium botulinum H04402 065] Length = 209 Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 85/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +KLGMT ++N G+ IPVTV+ C V+ +T++K+GY A+QV G+ + K Sbjct: 1 MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP++G F+ VS K+ + EF+++ D + L +G F G+ VD++G++ GKGF Sbjct: 61 RNKPVKGHFAKAGVSVKRHIKEFKLE-DSNSLKIGQEIKADIFEAGERVDISGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G ++R N +HG S HR+ GS G DP R FKNK+M G MG TV NLEVV Sbjct: 120 QGTIRRWNAHRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + ++ LIL+KG VPG K + +R++ K+ Sbjct: 179 RIIPEKNLILIKGGVPGPNK-GLVQIRNTVKA 209 >gi|331268413|ref|YP_004394905.1| 50S ribosomal protein L3 [Clostridium botulinum BKT015925] gi|329124963|gb|AEB74908.1| ribosomal protein L3 [Clostridium botulinum BKT015925] Length = 209 Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 87/212 (41%), Positives = 130/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ RK+GMT +++ G+ IPVTV+ C V+ +T +K+GY A+QVG + + K Sbjct: 1 MKKAIIGRKIGMTQIFDENGKVIPVTVVEAGPCAVLQKKTEEKDGYNAIQVGFEDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G F+ VS K+ + EFR++ D+ VG+ F G VDVTG++ GKGF Sbjct: 61 ANKPKKGHFAKAGVSLKRIVREFRLENIDE-YEVGNEIKADVFEAGDKVDVTGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF HG S HR+ GS G DP R FKNKKM G MG + TV NLEVV Sbjct: 120 QGTIKRWNFHRGPMAHG-SKYHRAVGSMGAASDPSRTFKNKKMPGHMGHKKSTVLNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V + ++L+KG +PG K +++++++ K+ Sbjct: 179 KVMADKNVVLIKGGIPGPNK-GYVVIKNTVKA 209 >gi|193211851|ref|YP_001997804.1| 50S ribosomal protein L3 [Chlorobaculum parvum NCIB 8327] gi|226725146|sp|B3QR75|RL3_CHLP8 RecName: Full=50S ribosomal protein L3 gi|193085328|gb|ACF10604.1| ribosomal protein L3 [Chlorobaculum parvum NCIB 8327] Length = 209 Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 88/207 (42%), Positives = 122/207 (58%), Gaps = 1/207 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT +YN + +P TV+ C V ++ +K+GY A Q+G GE K V+KP Sbjct: 4 ILGKKIGMTRLYNNKREAVPCTVIQAGPCFVAQVKSTEKDGYDAYQLGFGERDEKKVTKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + G + +P L E L G+ + FT G++VDV G+T GKGF+G + Sbjct: 64 LAGHYKKAGKTPGYLLSEVSKSLIAGELEAGATVAVDVFTEGEIVDVLGVTKGKGFAGVV 123 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHNFGG THG S R+ GS G DP R FK +MAGRMGG TV+NLE+V V Sbjct: 124 KRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFKGTRMAGRMGGENKTVRNLEIVKVMP 183 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211 + LI+VKG VPG KNS++ + + K Sbjct: 184 ESNLIVVKGAVPGP-KNSYVKIVSTTK 209 >gi|222056705|ref|YP_002539067.1| ribosomal protein L3 [Geobacter sp. FRC-32] gi|254803674|sp|B9M6U5|RL3_GEOSF RecName: Full=50S ribosomal protein L3 gi|221565994|gb|ACM21966.1| ribosomal protein L3 [Geobacter sp. FRC-32] Length = 211 Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ +GRRIPVTV+ C V+ +T +K+GY A+QVG + Sbjct: 1 MNKGLIGKKIGMTQIFADDGRRIPVTVVEAGPCVVIQKKTKEKDGYNAIQVGFDAKEAAK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + G + E RV + D VG V + F G ++DVTG +IGKGF Sbjct: 61 ANSATVGHCKAAGSGAFSFFRELRVD-NVDSYNVGDVLNADLFAAGDVIDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR F G R++HG S HR+ GS GC P RVFKNKKM G++G RVTV+ L+VV Sbjct: 120 QGVIKRWGFKGGRSSHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQLGNERVTVQRLKVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD LILV G +PG+ N + ++DS K+ Sbjct: 179 RVDAADNLILVGGAIPGS-TNGLVFIKDSVKA 209 >gi|160872579|ref|ZP_02062711.1| ribosomal protein L3 [Rickettsiella grylli] gi|159121378|gb|EDP46716.1| ribosomal protein L3 [Rickettsiella grylli] Length = 223 Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 85/203 (41%), Positives = 123/203 (60%), Gaps = 5/203 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK GMT +Y G IPVT++ + +VV +T +++GY ++QV G+ Sbjct: 1 MTMGLIGRKCGMTQLYAENGTVIPVTLIEIQPNRVVQIKTKERDGYESIQVTTGKKLSSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG-----SVFSPSYFTVGQLVDVTGMT 115 ++K G F+ V P L+E R+ ++D G + F +G VDVTG Sbjct: 61 LNKAEAGHFAKAAVEPGINLWELRITEEDHEFLKGISLGMEMTIDKLFKLGTYVDVTGTN 120 Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175 GKGF+G +KR++F ATHG S+SHR+ GS G RQ PGRVFK KKM G++G R TV+ Sbjct: 121 KGKGFAGVVKRYHFSTQDATHGNSLSHRAPGSIGQRQSPGRVFKGKKMCGQLGNRRCTVQ 180 Query: 176 NLEVVSVDDKRGLILVKGCVPGA 198 +LE+V +D +R L+ +KG VPGA Sbjct: 181 SLEIVRIDTERHLLHIKGAVPGA 203 >gi|304438907|ref|ZP_07398830.1| 50S ribosomal protein L3 [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372573|gb|EFM26156.1| 50S ribosomal protein L3 [Peptoniphilus duerdenii ATCC BAA-1640] Length = 210 Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 88/209 (42%), Positives = 126/209 (60%), Gaps = 3/209 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT +++ G PVTV+ VV ++++ +GY AVQV +G+ K+ V+KP Sbjct: 4 LIGKKVGMTQLFDENGTVTPVTVIQAMPNVVVQKKSVETDGYNAVQVASGDVKLNRVNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +G F NV PKK L EF+ D D +G + + F+ G VDV G + GKG G + Sbjct: 64 TKGHFEKANVEPKKYLNEFKTD-DLDSYEIGKELNVTIFSEGDFVDVVGTSKGKGTQGVV 122 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 RH FG R THG S HR G G PG+V+KN +MAG+ G RVTV+NL VV VD+ Sbjct: 123 TRHGFGRGRETHG-SKFHRMPGGMGAATYPGKVWKNHRMAGKTGNERVTVQNLLVVRVDE 181 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +R LI VKG +PG K+ + V+++ K Sbjct: 182 ERNLIFVKGSIPGPKRGK-VTVKETVKQG 209 >gi|229825321|ref|ZP_04451390.1| hypothetical protein GCWU000182_00675 [Abiotrophia defectiva ATCC 49176] gi|229790693|gb|EEP26807.1| hypothetical protein GCWU000182_00675 [Abiotrophia defectiva ATCC 49176] Length = 211 Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 92/205 (44%), Positives = 121/205 (59%), Gaps = 2/205 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++ +G IPVTVL D V +T++ +GY AVQVG G+ + Sbjct: 1 MKKAILATKIGMTQIFAEDGSLIPVTVLKADPAVVTQVKTVENDGYSAVQVGFGDIRENL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G F+ V K+ L EF+++ D + G F G VD T + GKGF Sbjct: 61 VNKPKKGHFAKAGVPVKRFLREFKLE-DAENYKAGDEIKSDVFAAGDKVDATATSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+ RH HG S HR GS G DP +VFK KKMAG MG +VTV+NLEVV Sbjct: 120 QGAIHRHGLHRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKKMAGHMGHVKVTVQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWIL 205 VD ++ LILVKG VPGAKK +L Sbjct: 179 RVDAEKNLILVKGAVPGAKKALVML 203 >gi|85858146|ref|YP_460348.1| 50S ribosomal protein L3P [Syntrophus aciditrophicus SB] gi|109893562|sp|Q2LQA1|RL3_SYNAS RecName: Full=50S ribosomal protein L3 gi|85721237|gb|ABC76180.1| LSU ribosomal protein L3P [Syntrophus aciditrophicus SB] Length = 218 Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 83/212 (39%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ RK+GMT V+ +G IPVT + ++ + +T++K+GY A+Q+G G K Sbjct: 10 MKKMIIGRKIGMTQVFAEDGAAIPVTAIEVEPSVITQKKTVEKDGYDAIQLGYGRIKQNK 69 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP++G F+ + + L E R + + +G + F G++VD+TG T GKGF Sbjct: 70 ATKPLQGHFAKADKGCFRILKEMRCDQIQEY-ELGQEITLDIFESGEMVDITGTTKGKGF 128 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH F G R++HG S+ HR+ GS G P RVFK KK+ G+MG + TVKNL + Sbjct: 129 AGVIKRHGFRGGRSSHG-SMFHRAPGSIGASAYPSRVFKGKKLPGQMGNKQKTVKNLMIW 187 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 S+ +R LIL++G VPGA +N ++ ++ S K+ Sbjct: 188 SLRPERNLILIRGAVPGA-RNGYLFIKQSAKA 218 >gi|289423692|ref|ZP_06425491.1| 50S ribosomal protein L3 [Peptostreptococcus anaerobius 653-L] gi|289155942|gb|EFD04608.1| 50S ribosomal protein L3 [Peptostreptococcus anaerobius 653-L] Length = 209 Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 92/210 (43%), Positives = 129/210 (61%), Gaps = 4/210 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V+ EG IPVTV+ V +TL+ +GY A+QVG +AK K ++K Sbjct: 3 GILGKKIGMTQVFTEEGLVIPVTVVEAGPVAVTQIKTLENDGYEAIQVGYVDAKEKALNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G + V K+ L EFRV + VG FT G+ +DVTG++ GKGF G Sbjct: 63 PQKGHLAKAGVL-KRHLKEFRVDTVEGY-EVGQEIKADLFTAGEKIDVTGISKGKGFQGP 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KRH +HG S HR GS G PGRVFKNKK+AG MG ++T++NLEVV VD Sbjct: 121 IKRHGQSRGPESHG-SRYHRRPGSMGACSYPGRVFKNKKLAGHMGSVKITIQNLEVVRVD 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++ L+L+KG +PGA K S + V+ + K + Sbjct: 180 AEKNLLLIKGAIPGA-KGSVVTVKAAIKGS 208 >gi|260589279|ref|ZP_05855192.1| 50S ribosomal protein L3 [Blautia hansenii DSM 20583] gi|331082685|ref|ZP_08331808.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 6_1_63FAA] gi|260540360|gb|EEX20929.1| 50S ribosomal protein L3 [Blautia hansenii DSM 20583] gi|330400304|gb|EGG79946.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 6_1_63FAA] Length = 209 Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 92/211 (43%), Positives = 125/211 (59%), Gaps = 5/211 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G PVTVL C V +T+D +GY AVQVG G+ + Sbjct: 1 MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTMDNDGYEAVQVGFGDKRENI 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+G F VS K+ + E +++ + L G F G +DVT + GKGF Sbjct: 61 VNKPMKGHFEKAGVSCKRFVRELKLEGEYTL---GQEIKADIFAAGDKIDVTATSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G DP +VFK K+M G MG RVTV+NLEVV Sbjct: 118 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKRMPGHMGHVRVTVQNLEVV 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + L+LVKG VPG KK S + ++++ K Sbjct: 177 RVDAENNLLLVKGAVPGPKK-SLVTIKETVK 206 >gi|19745241|ref|NP_606377.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS8232] gi|21909576|ref|NP_663844.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS315] gi|28894954|ref|NP_801304.1| 50S ribosomal protein L3 [Streptococcus pyogenes SSI-1] gi|71909858|ref|YP_281408.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS5005] gi|139472927|ref|YP_001127642.1| 50S ribosomal protein L3 [Streptococcus pyogenes str. Manfredo] gi|251781515|ref|YP_002995816.1| 50S ribosomal protein L3 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|306828260|ref|ZP_07461520.1| 50S ribosomal protein L3 [Streptococcus pyogenes ATCC 10782] gi|42559572|sp|P60451|RL3_STRP3 RecName: Full=50S ribosomal protein L3 gi|42559573|sp|P60452|RL3_STRP8 RecName: Full=50S ribosomal protein L3 gi|166234599|sp|A2RC14|RL3_STRPG RecName: Full=50S ribosomal protein L3 gi|19747335|gb|AAL96876.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS8232] gi|21903757|gb|AAM78647.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS315] gi|28810199|dbj|BAC63137.1| 50S ribosomal protein L3 [Streptococcus pyogenes SSI-1] gi|71852640|gb|AAZ50663.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS5005] gi|134271173|emb|CAM29386.1| 50S ribosomal protein L3 [Streptococcus pyogenes str. Manfredo] gi|242390143|dbj|BAH80602.1| 50S ribosomal protein L3 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|304429571|gb|EFM32620.1| 50S ribosomal protein L3 [Streptococcus pyogenes ATCC 10782] gi|323126311|gb|ADX23608.1| 50S ribosomal protein L3 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 208 Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 95/213 (44%), Positives = 132/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ S F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVTV+NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +ILVKG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILVKGNVPGAKK-SLITIKSAVKAA 207 >gi|323344636|ref|ZP_08084860.1| 50S ribosomal protein L3 [Prevotella oralis ATCC 33269] gi|323093906|gb|EFZ36483.1| 50S ribosomal protein L3 [Prevotella oralis ATCC 33269] Length = 204 Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 83/205 (40%), Positives = 125/205 (60%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V++ +G+ P TV+ + C V +T++K+GY AVQ+G GEAK K + Sbjct: 3 GLIGRKIGMTSVFSADGKNTPCTVIEIGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTTM 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 PM G F +PKK L EF+ ++ +L G + F + VDV G + GKGF G Sbjct: 63 PMMGIFKKAGTTPKKHLAEFKFDEEYNL---GDTLTVELFEGTEFVDVIGTSKGKGFQGV 119 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ ++THG R GS G P +VFK +MAG+MGG+RVT +NL V+ V Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLRVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 ++ L++VKG G ++ ++ + Sbjct: 180 IPEQNLLIVKGSFAGCNGSTVLIEK 204 >gi|225574700|ref|ZP_03783310.1| hypothetical protein RUMHYD_02777 [Blautia hydrogenotrophica DSM 10507] gi|225038090|gb|EEG48336.1| hypothetical protein RUMHYD_02777 [Blautia hydrogenotrophica DSM 10507] Length = 224 Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 88/212 (41%), Positives = 126/212 (59%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G IPVTVL C V +T + +GY AVQVG + + Sbjct: 15 MKKAILATKVGMTQIFNEDGVLIPVTVLQAGPCVVTQVKTEENDGYSAVQVGYADKRENL 74 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+G F VS K+ + EF++ + +G F G +D T ++ GKG+ Sbjct: 75 VNKPMKGHFEKAGVSCKRFVKEFKLDNAAEY-ELGQEIKVDVFEAGDHIDATAISKGKGY 133 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G DP +VFK KKM G+MG ++T++NLEVV Sbjct: 134 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGAASDPSKVFKGKKMPGQMGNKQITIQNLEVV 192 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + L+LVKG VPG KK S + ++++ KS Sbjct: 193 RVDAENNLLLVKGAVPGPKK-SLVTIKETVKS 223 >gi|307069692|ref|YP_003878169.1| 50S ribosomal subunit protein L3 [Candidatus Zinderia insecticola CARI] gi|306482952|gb|ADM89823.1| 50S ribosomal subunit protein L3 [Candidatus Zinderia insecticola CARI] Length = 202 Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 80/198 (40%), Positives = 120/198 (60%), Gaps = 2/198 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK-NVSK 63 ++ +K+GM+C+YN G IPVT++ + N V + + K+ Y ++Q+ G+ K+ N+ K Sbjct: 1 MIGKKIGMSCLYNKNGSMIPVTIIDVSNNFVTQIKNIKKDKYFSIQISYGKNKISSNMKK 60 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F + EF+ K +G + F + Q V + G +IGKGFSG Sbjct: 61 PLIGHFYKSKTKYNYIIKEFK-NKRYSKFNLGERIKINIFNLNQKVSIKGKSIGKGFSGT 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KRHNF RA+HG S SH+S GS G QDPGRVFK KKM G++G T++NLE++ +D Sbjct: 120 IKRHNFSSGRASHGNSRSHKSPGSVGMCQDPGRVFKGKKMCGQLGNKNCTIRNLEILKID 179 Query: 184 DKRGLILVKGCVPGAKKN 201 +K L+ +KG +PG K N Sbjct: 180 NKNNLLWIKGSIPGFKNN 197 >gi|206890251|ref|YP_002249245.1| ribosomal protein L3 [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742189|gb|ACI21246.1| ribosomal protein L3 [Thermodesulfovibrio yellowstonii DSM 11347] Length = 205 Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 89/196 (45%), Positives = 122/196 (62%), Gaps = 6/196 (3%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVKNVSK 63 ++ +K+GMT +++ EGR IPVTV+ C +V R+ +KNGY AVQ+G E K KNV K Sbjct: 4 ILGKKIGMTQIFDEEGRIIPVTVIEAGPCWIVQVRSKEKNGYEAVQLGFQEIKKEKNVPK 63 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F + P + L EF++ + VG + FT G +V + G++ GKG+ G Sbjct: 64 PLLGIFKKAGIPPCRVLKEFKMTGFN----VGDKVTVEIFTKGDVVSIAGISKGKGYQGV 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF G THG S+ +R+ GS G P RV+K K MAG MG RVTVKNL +V V Sbjct: 120 MKRHNFAGGPDTHG-SMFNRAPGSIGASSFPSRVWKGKGMAGHMGNERVTVKNLTIVDVI 178 Query: 184 DKRGLILVKGCVPGAK 199 ++ L+LVKG VPG + Sbjct: 179 PEQNLLLVKGAVPGGE 194 >gi|291286312|ref|YP_003503128.1| 50S ribosomal protein L3 [Denitrovibrio acetiphilus DSM 12809] gi|290883472|gb|ADD67172.1| 50S ribosomal protein L3 [Denitrovibrio acetiphilus DSM 12809] Length = 211 Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 93/213 (43%), Positives = 128/213 (60%), Gaps = 5/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVK 59 M ++ +K+GMT V+N +G +PVTV+ C V RT +K+GY A+Q+G E K Sbjct: 1 MAKAIIGKKVGMTQVFNEDGTVVPVTVVLAGPCVVTEVRTEEKDGYSAIQLGFDEIVKET 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KPM G+F V P K L EFR + + + VG + F G LVDV G +IGKG Sbjct: 61 RVNKPMAGYFKKQGVKPMKFLKEFRGEAGE--ITVGQQVDVNVFEEGDLVDVQGTSIGKG 118 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKRH F G THG S HR+ GS G + PG K +KM GRMGG +VTV+NL V Sbjct: 119 FQGVMKRHGFAGGPKTHG-SHFHRAPGSIGMCEFPGETPKGRKMPGRMGGKKVTVQNLSV 177 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V V + L+LVKG +PG ++ + ++++ K+ Sbjct: 178 VKVIPETNLLLVKGAIPG-HDDAIVYIKEAVKA 209 >gi|332042720|gb|EGI78920.1| 50S ribosomal protein L3 [Lacinutrix algicola 5H-3-7-4] Length = 205 Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 86/206 (41%), Positives = 128/206 (62%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C V RT + +GY AVQ+G +A K+ + Sbjct: 2 SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCIVTQVRTEEVDGYKAVQLGFDDATEKSAT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G S K+K+ EF Q ++ +G + +F G+ VDV+G + GKGF G Sbjct: 62 KADLGHAKKAGTSVKRKIAEF--QGFEEEYKLGDAITVEHFAEGEFVDVSGTSKGKGFQG 119 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG+ +ATHG R+ GS G P RVFK KMAGRMGG+ + V+NL V+ Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGRMGGDTIKVQNLRVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L++VKGCVPG KN+++++R Sbjct: 180 VVTEKNLLVVKGCVPG-HKNAYVIIR 204 >gi|30018380|ref|NP_830011.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 14579] gi|42559608|sp|Q81J42|RL3_BACCR RecName: Full=50S ribosomal protein L3 gi|29893920|gb|AAP07212.1| LSU ribosomal protein L3P [Bacillus cereus ATCC 14579] Length = 210 Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 93/211 (44%), Positives = 132/211 (62%), Gaps = 4/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ + V+ +T + +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGELIPVTVIAANPNVVLQKKTTETDGYNAIQLGFEDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + + +PK+ + E R D D L VG F G++VDVTG++ GKGF Sbjct: 61 TNKPEQGHTAKASTTPKRFIREIR-DADVDGLEVGQEVKVDVFATGEIVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH +HG S HR GS G P RVFK KK+AGRMGG++VT++NLE+V Sbjct: 120 QGVIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L+LVKG VPGAKK S ++V+ + K Sbjct: 178 QVDTERNLLLVKGNVPGAKK-SLVVVQGAVK 207 >gi|258406185|ref|YP_003198927.1| 50S ribosomal protein L3 [Desulfohalobium retbaense DSM 5692] gi|257798412|gb|ACV69349.1| 50S ribosomal protein L3 [Desulfohalobium retbaense DSM 5692] Length = 209 Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 88/203 (43%), Positives = 122/203 (60%), Gaps = 2/203 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +KLGMT V+ +G IPVTV+ C V+ +T + +GY A+Q+GA V+KP Sbjct: 6 LIGKKLGMTRVFGEDGTVIPVTVIQAGPCPVIQVKTAETDGYTALQIGADPLPAHRVTKP 65 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +G + +KL E RV+ + P G S FT+G+ +DVTG + G+GF+GAM Sbjct: 66 QQGHQAKAGKGCFRKLQEVRVEDAAEYEP-GQELSVDMFTIGERIDVTGKSKGRGFAGAM 124 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR NFGG +THG HRS G+ G P R+FK KKM G MG RV+V+N EVV + Sbjct: 125 KRWNFGGSPSTHGHEKVHRSTGAVGQCAAPSRIFKGKKMPGHMGAQRVSVRNAEVVDIRP 184 Query: 185 KRGLILVKGCVPGAKKNSWILVR 207 + LIL++G VPG KN I +R Sbjct: 185 EDNLILLRGQVPGP-KNGVITLR 206 >gi|111115307|ref|YP_709925.1| 50S ribosomal protein L3 [Borrelia afzelii PKo] gi|123341335|sp|Q0SN29|RL3_BORAP RecName: Full=50S ribosomal protein L3 gi|110890581|gb|ABH01749.1| ribosomal protein L3 [Borrelia afzelii PKo] Length = 206 Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 91/209 (43%), Positives = 130/209 (62%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ G +PVTV+ ++ +T+D++GY A+ G+ + K VSK Sbjct: 3 GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKVSK 62 Query: 64 PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + S+ ++ PKK + E K D G F + VDVTG T GKGF G Sbjct: 63 PIKGQYKSLKDIEPKKYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 ++++ ILVKG VPGA K S+++V+ S K Sbjct: 179 NEEKRAILVKGAVPGA-KGSFVVVKKSKK 206 >gi|300857762|ref|YP_003782745.1| 50S ribosomal protein L3 [Corynebacterium pseudotuberculosis FRC41] gi|300685216|gb|ADK28138.1| 50S ribosomal protein L3 [Corynebacterium pseudotuberculosis FRC41] gi|302205500|gb|ADL09842.1| 50S ribosomal protein L3 [Corynebacterium pseudotuberculosis C231] gi|302330055|gb|ADL20249.1| 50S ribosomal protein L3 [Corynebacterium pseudotuberculosis 1002] gi|308275736|gb|ADO25635.1| 50S ribosomal protein L3 [Corynebacterium pseudotuberculosis I19] Length = 218 Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 84/213 (39%), Positives = 121/213 (56%), Gaps = 2/213 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT +++ + R IPVTV+ C V RT++ +GY A+Q+ G+ + +K Sbjct: 8 GILGTKLGMTQIFDEDNRVIPVTVVEAGPCVVTQIRTIETDGYNAIQIAYGDIDPRKANK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ + E R+ D +G + F VDVTG T GKG++GA Sbjct: 68 PATGHFKKAGVTPRRHVAEIRMN-DVSAYELGQDVTVEIFEGITFVDVTGTTKGKGYAGA 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G A HG +HR G G PGRVFK +MAGRMG +RVT +NL+V +D Sbjct: 127 MKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGNDRVTTQNLKVQKID 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 LIL+KG +PG + + V+ + K + Sbjct: 187 ADANLILIKGAIPG-NRGGIVTVKTAVKGGAHA 218 >gi|219684396|ref|ZP_03539340.1| ribosomal protein L3 [Borrelia garinii PBr] gi|219672385|gb|EED29438.1| ribosomal protein L3 [Borrelia garinii PBr] Length = 206 Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 92/209 (44%), Positives = 129/209 (61%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ G IPVTV+ ++ +T+D++GY A+ G+ + K VSK Sbjct: 3 GLIGKKVGMTQIFQKNGIVIPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKVSK 62 Query: 64 PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + S+ ++ P+K + E K D G F + VDVTG T GKGF G Sbjct: 63 PIKGQYKSLKDIEPQKYVIEL---KGLDGYDPGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNKQTIQNLEVVLI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D++ ILVKG VPGA K S+++V+ S K Sbjct: 179 DEENRAILVKGAVPGA-KGSFVVVKKSKK 206 >gi|152964657|ref|YP_001360441.1| ribosomal protein L3 [Kineococcus radiotolerans SRS30216] gi|189042849|sp|A6W5T8|RL3_KINRD RecName: Full=50S ribosomal protein L3 gi|151359174|gb|ABS02177.1| ribosomal protein L3 [Kineococcus radiotolerans SRS30216] Length = 219 Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 86/211 (40%), Positives = 121/211 (57%), Gaps = 2/211 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ KLGMT +++ + R +PVTV+ ++ V RT +GY AVQ+ + +K Sbjct: 8 GVLGTKLGMTQLWDADNRIVPVTVVKVEPNVVTQIRTTTVDGYEAVQLATTAIAQRKATK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ L E R D +G + F G VDV G T GKGF+G Sbjct: 68 PAAGHFEKAGVAPRRHLVELRTTDAADY-SLGQEVTAEAFATGATVDVVGTTKGKGFAGV 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G+ A+HG +HR GS G PGRVFK +MAGRMG R T +NL V +VD Sbjct: 127 MKRHGFHGVGASHGAHRNHRKPGSIGGCATPGRVFKGMRMAGRMGAARQTTQNLTVQAVD 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 ++GL+L+ G +PG + +LV+ + K+ V Sbjct: 187 AEKGLLLITGAIPG-PRGGLVLVKSASKARV 216 >gi|17231707|ref|NP_488255.1| 50S ribosomal protein L3 [Nostoc sp. PCC 7120] gi|42559670|sp|Q8YPH9|RL3_ANASP RecName: Full=50S ribosomal protein L3 gi|17133350|dbj|BAB75914.1| 50S ribosomal protein L3 [Nostoc sp. PCC 7120] Length = 211 Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 83/197 (42%), Positives = 121/197 (61%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT +++ G IPVTV+ + C V ++ +GY A+QVG GE K K Sbjct: 1 MSVGILGTKLGMTQIFDEAGVAIPVTVVQVGPCVVTQVKSKQTDGYAAIQVGYGEVKPKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P+ G + + + L E+ D +G F+VG+LVDV G +IG+GF Sbjct: 61 LNRPLLGHLAKSSAPALRHLKEYHTDGSSDYA-LGQEIKADIFSVGELVDVIGTSIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KR+NFG +HG S +HR+ GS G PGRV+ K+MAGR+GG RVT++ L V+ Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGTRVTIRKLTVI 178 Query: 181 SVDDKRGLILVKGCVPG 197 VD +R L+L+KG VPG Sbjct: 179 RVDAERNLLLIKGAVPG 195 >gi|218290005|ref|ZP_03494182.1| ribosomal protein L3 [Alicyclobacillus acidocaldarius LAA1] gi|218239990|gb|EED07177.1| ribosomal protein L3 [Alicyclobacillus acidocaldarius LAA1] Length = 211 Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 91/209 (43%), Positives = 125/209 (59%), Gaps = 4/209 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT V+ +G +PVTV+ C V+ R LDK+GY A+Q+G + K +K Sbjct: 3 GILGRKLGMTQVFTEDGDVVPVTVIEAGPCVVLQKRVLDKDGYEAIQLGFADKKASRATK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G + +PK+ + E R ++ VG F G +VDVTG++ GKGF+G Sbjct: 63 PEIGHAAKAGTAPKRYIREIRGVNVEE-YEVGQQVKADIFAPGDIVDVTGVSKGKGFAGP 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KRHN HG S HR GS G P R FK + MAGRMGG RVTV+NLEVV VD Sbjct: 122 IKRHNQHRGPMAHG-SKYHRGVGSLGSIA-PNRTFKGQTMAGRMGGERVTVQNLEVVKVD 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 ++ +IL+KG VPG +NS++ +R + K Sbjct: 180 PEKNVILIKGSVPGP-RNSFVTIRSAVKQ 207 >gi|284040621|ref|YP_003390551.1| 50S ribosomal protein L3 [Spirosoma linguale DSM 74] gi|283819914|gb|ADB41752.1| 50S ribosomal protein L3 [Spirosoma linguale DSM 74] Length = 220 Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 90/210 (42%), Positives = 128/210 (60%), Gaps = 11/210 (5%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT VYN +G+ + TV+ C V R+++K+GY AVQ+G G+ K K+ + Sbjct: 16 SGLIGKKIGMTSVYNADGQALACTVIETGPCVVTQVRSVEKDGYTAVQLGYGDKKEKHSN 75 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDD----DLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 KP G F +PK+KL EF+ + + L V VF+ + F VDV G G+ Sbjct: 76 KPEMGHFKKAGTTPKRKLVEFKEFEQELALGTTLTVADVFAETDF-----VDVVGTAKGR 130 Query: 119 GFSGAMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 GF G +KRH FGG+ THG R GS G P RVFK +MAGRMGGNRV V+NL Sbjct: 131 GFQGVVKRHGFGGVGGQTHGQHNRGRHPGSIGACSFPSRVFKGLRMAGRMGGNRVKVQNL 190 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVR 207 V+ V ++ L++V G +PGA KNS++++ Sbjct: 191 RVLRVLPEQNLLVVSGSIPGA-KNSYVIIE 219 >gi|71902709|ref|YP_279512.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS6180] gi|94987675|ref|YP_595776.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS9429] gi|94989555|ref|YP_597655.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS10270] gi|94991544|ref|YP_599643.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS2096] gi|209558627|ref|YP_002285099.1| 50S ribosomal protein L3 [Streptococcus pyogenes NZ131] gi|109893561|sp|Q48VU9|RL3_STRPM RecName: Full=50S ribosomal protein L3 gi|122986963|sp|Q1JE59|RL3_STRPB RecName: Full=50S ribosomal protein L3 gi|123382464|sp|Q1JJ62|RL3_STRPD RecName: Full=50S ribosomal protein L3 gi|123382568|sp|Q1JP17|RL3_STRPC RecName: Full=50S ribosomal protein L3 gi|226730577|sp|B5XJ36|RL3_STRPZ RecName: Full=50S ribosomal protein L3 gi|71801804|gb|AAX71157.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS6180] gi|94541183|gb|ABF31232.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS9429] gi|94543063|gb|ABF33111.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10270] gi|94545052|gb|ABF35099.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS2096] gi|209539828|gb|ACI60404.1| LSU ribosomal protein L3p (L3e) [Streptococcus pyogenes NZ131] Length = 208 Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 94/213 (44%), Positives = 132/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ S F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVTV+NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207 >gi|30260301|ref|NP_842678.1| 50S ribosomal protein L3 [Bacillus anthracis str. Ames] gi|42779191|ref|NP_976438.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 10987] gi|47525366|ref|YP_016715.1| 50S ribosomal protein L3 [Bacillus anthracis str. 'Ames Ancestor'] gi|49183144|ref|YP_026396.1| 50S ribosomal protein L3 [Bacillus anthracis str. Sterne] gi|49479271|ref|YP_034462.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52145108|ref|YP_081721.1| 50S ribosomal protein L3 [Bacillus cereus E33L] gi|118475879|ref|YP_893030.1| 50S ribosomal protein L3 [Bacillus thuringiensis str. Al Hakam] gi|206972204|ref|ZP_03233151.1| 50S ribosomal protein L3 [Bacillus cereus AH1134] gi|217957685|ref|YP_002336229.1| 50S ribosomal protein L3 [Bacillus cereus AH187] gi|218230754|ref|YP_002364959.1| 50S ribosomal protein L3 [Bacillus cereus B4264] gi|218901314|ref|YP_002449148.1| ribosomal protein L3 [Bacillus cereus AH820] gi|222093880|ref|YP_002527930.1| 50S ribosomal protein l3 [Bacillus cereus Q1] gi|225862162|ref|YP_002747540.1| 50S ribosomal protein L3 [Bacillus cereus 03BB102] gi|227812783|ref|YP_002812792.1| 50S ribosomal protein L3 [Bacillus anthracis str. CDC 684] gi|228912849|ref|ZP_04076496.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228919060|ref|ZP_04082439.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228983365|ref|ZP_04143578.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229089241|ref|ZP_04220522.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-42] gi|229153888|ref|ZP_04282018.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 4342] gi|229182504|ref|ZP_04309755.1| 50S ribosomal protein L3 [Bacillus cereus BGSC 6E1] gi|229188395|ref|ZP_04315443.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 10876] gi|229194500|ref|ZP_04321303.1| 50S ribosomal protein L3 [Bacillus cereus m1293] gi|229603960|ref|YP_002864761.1| 50S ribosomal protein L3 [Bacillus anthracis str. A0248] gi|254684386|ref|ZP_05148246.1| 50S ribosomal protein L3 [Bacillus anthracis str. CNEVA-9066] gi|254720832|ref|ZP_05182624.1| 50S ribosomal protein L3 [Bacillus anthracis str. A1055] gi|254733589|ref|ZP_05191309.1| 50S ribosomal protein L3 [Bacillus anthracis str. Western North America USA6153] gi|254739507|ref|ZP_05197204.1| 50S ribosomal protein L3 [Bacillus anthracis str. Kruger B] gi|254751228|ref|ZP_05203266.1| 50S ribosomal protein L3 [Bacillus anthracis str. Vollum] gi|254756765|ref|ZP_05208794.1| 50S ribosomal protein L3 [Bacillus anthracis str. Australia 94] gi|296500944|ref|YP_003662644.1| 50S ribosomal protein L3 [Bacillus thuringiensis BMB171] gi|300119578|ref|ZP_07057122.1| 50S ribosomal protein L3 [Bacillus cereus SJ1] gi|301051847|ref|YP_003790058.1| 50S ribosomal protein L3 [Bacillus anthracis CI] gi|42559609|sp|Q81VT0|RL3_BACAN RecName: Full=50S ribosomal protein L3 gi|81824428|sp|Q63H90|RL3_BACCZ RecName: Full=50S ribosomal protein L3 gi|81828437|sp|Q6HPQ8|RL3_BACHK RecName: Full=50S ribosomal protein L3 gi|81831213|sp|Q73F96|RL3_BACC1 RecName: Full=50S ribosomal protein L3 gi|166233117|sp|A0R8I0|RL3_BACAH RecName: Full=50S ribosomal protein L3 gi|226725129|sp|B7JKB9|RL3_BACC0 RecName: Full=50S ribosomal protein L3 gi|226725131|sp|B7HJ48|RL3_BACC4 RecName: Full=50S ribosomal protein L3 gi|226725132|sp|B7HQU4|RL3_BACC7 RecName: Full=50S ribosomal protein L3 gi|254803651|sp|C3P9Q5|RL3_BACAA RecName: Full=50S ribosomal protein L3 gi|254803652|sp|C3LJ82|RL3_BACAC RecName: Full=50S ribosomal protein L3 gi|254803653|sp|C1ET39|RL3_BACC3 RecName: Full=50S ribosomal protein L3 gi|254803654|sp|B9IZJ4|RL3_BACCQ RecName: Full=50S ribosomal protein L3 gi|30253622|gb|AAP24164.1| 50S ribosomal protein L3 [Bacillus anthracis str. Ames] gi|42735106|gb|AAS39046.1| ribosomal protein L3 [Bacillus cereus ATCC 10987] gi|47500514|gb|AAT29190.1| ribosomal protein L3 [Bacillus anthracis str. 'Ames Ancestor'] gi|49177071|gb|AAT52447.1| ribosomal protein L3 [Bacillus anthracis str. Sterne] gi|49330827|gb|AAT61473.1| ribosomal protein L3 (50S ribosomal protein L3) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51978577|gb|AAU20127.1| ribosomal protein L3 (50S ribosomal protein L3) [Bacillus cereus E33L] gi|118415104|gb|ABK83523.1| LSU ribosomal protein L3P [Bacillus thuringiensis str. Al Hakam] gi|206732778|gb|EDZ49953.1| 50S ribosomal protein L3 [Bacillus cereus AH1134] gi|217067429|gb|ACJ81679.1| ribosomal protein L3 [Bacillus cereus AH187] gi|218158711|gb|ACK58703.1| ribosomal protein L3 [Bacillus cereus B4264] gi|218534762|gb|ACK87160.1| ribosomal protein L3 [Bacillus cereus AH820] gi|221237928|gb|ACM10638.1| ribosomal protein L3 (50S ribosomal protein L3) [Bacillus cereus Q1] gi|225787302|gb|ACO27519.1| 50S ribosomal protein L3 [Bacillus cereus 03BB102] gi|227007571|gb|ACP17314.1| 50S ribosomal protein L3 [Bacillus anthracis str. CDC 684] gi|228588966|gb|EEK46981.1| 50S ribosomal protein L3 [Bacillus cereus m1293] gi|228595069|gb|EEK52840.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 10876] gi|228600959|gb|EEK58528.1| 50S ribosomal protein L3 [Bacillus cereus BGSC 6E1] gi|228629569|gb|EEK86266.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 4342] gi|228694080|gb|EEL47762.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-42] gi|228776355|gb|EEM24708.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228840585|gb|EEM85847.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228846785|gb|EEM91790.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229268368|gb|ACQ50005.1| 50S ribosomal protein L3 [Bacillus anthracis str. A0248] gi|296321996|gb|ADH04924.1| 50S ribosomal protein L3 [Bacillus thuringiensis BMB171] gi|298723050|gb|EFI63948.1| 50S ribosomal protein L3 [Bacillus cereus SJ1] gi|300374016|gb|ADK02920.1| 50S ribosomal protein L3 [Bacillus cereus biovar anthracis str. CI] gi|324324101|gb|ADY19361.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar finitimus YBT-020] Length = 210 Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 93/211 (44%), Positives = 132/211 (62%), Gaps = 4/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ + V+ +T + +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGELIPVTVIAANPNVVLQKKTTETDGYNAIQLGFEDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + + +PK+ + E R D D L VG F G++VDVTG++ GKGF Sbjct: 61 TNKPEQGHTAKASTTPKRFIREIR-DADVDGLEVGQEVKVDVFATGEIVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH +HG S HR GS G P RVFK KK+AGRMGG++VT++NLE+V Sbjct: 120 QGVIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L+LVKG VPGAKK S ++V+ + K Sbjct: 178 QVDTERNLLLVKGNVPGAKK-SLVVVQGAVK 207 >gi|169823852|ref|YP_001691463.1| 50S ribosomal protein L3 [Finegoldia magna ATCC 29328] gi|303234744|ref|ZP_07321370.1| 50S ribosomal protein L3 [Finegoldia magna BVS033A4] gi|226725177|sp|B0RZU0|RL3_FINM2 RecName: Full=50S ribosomal protein L3 gi|167830657|dbj|BAG07573.1| 50S ribosomal protein L3 [Finegoldia magna ATCC 29328] gi|302494085|gb|EFL53865.1| 50S ribosomal protein L3 [Finegoldia magna BVS033A4] Length = 209 Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 90/208 (43%), Positives = 129/208 (62%), Gaps = 3/208 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT ++N +G +PVTV+ V +T +K GY A+QVG E K K+V++P Sbjct: 4 ILGKKIGMTQIFNEDGSVVPVTVIEAGPMVVTQIKTKEKEGYNAIQVGYIEKKEKHVNQP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 MRG F VS KK L EF++ DD+ +G F G +VDV G++ GKG GA+ Sbjct: 64 MRGHFGKAGVSFKKHLREFKIN-DDEQFNLGDEIKLDIFQDGDVVDVIGISKGKGTQGAI 122 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 RHN+ HG S SHR G+ P RVFK +K +G+MG +RVTV+NL++V VD+ Sbjct: 123 VRHNYSRGPMGHG-SKSHRVAGARSAGSYPARVFKGRKGSGKMGHDRVTVQNLKIVKVDN 181 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPG K + VR++ KS Sbjct: 182 ERNLLLIKGAVPG-NKGGVVTVREAIKS 208 >gi|253995718|ref|YP_003047782.1| 50S ribosomal protein L3 [Methylotenera mobilis JLW8] gi|253982397|gb|ACT47255.1| ribosomal protein L3 [Methylotenera mobilis JLW8] Length = 216 Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 88/214 (41%), Positives = 129/214 (60%), Gaps = 6/214 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ +G +PVTVL + +V +T +GY +QV G + Sbjct: 1 MSLGLIGRKVGMTRVFTEDGASVPVTVLEVVPNRVTQIKTTASDGYTGLQVAYGTRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP---VGSVFSPSYFTVGQLVDVTGMTIG 117 ++K + G ++ + + EF V DD+L G+ + F GQ VDVTG ++G Sbjct: 61 INKALTGHYAKSGSAAGAGIHEFSV--GDDVLANYTPGANITVDIFQAGQKVDVTGTSLG 118 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF+GA+KRH+F RA+HG S SH GS G QDPGRVF K+M G +G +VT +NL Sbjct: 119 KGFAGAIKRHHFSSNRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMPGHLGAVKVTTQNL 178 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 E+V VD +R L+L+KG +PG+K ++VR + K Sbjct: 179 EIVRVDVERNLLLIKGAIPGSKGGD-VVVRPAIK 211 >gi|171462879|ref|YP_001796992.1| ribosomal protein L3 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|226730546|sp|B1XSQ1|RL3_POLNS RecName: Full=50S ribosomal protein L3 gi|171192417|gb|ACB43378.1| ribosomal protein L3 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 218 Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 86/207 (41%), Positives = 123/207 (59%), Gaps = 2/207 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ EG IPVTV+ + + +V +T NGY A+Q+ G + Sbjct: 1 MSLGLIGRKVGMTRLFTDEGEAIPVTVIDVSDNRVAQIKTQATNGYDAIQLAHGTRRATR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQ--KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 V+K M G F+ V L EF + K ++ P + + + FT GQ VDV G+TIGK Sbjct: 61 VTKAMAGHFAKAGVMAGNALNEFHLDAAKIAEMTPGQVIPAETAFTAGQKVDVQGVTIGK 120 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G++G +KR++F RA+HG S SH GS G QDPGRVF K+M G +G TV+NL Sbjct: 121 GYAGTIKRYHFASGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDITRTVQNLV 180 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWIL 205 + +D +R LI+VKG +PGA I+ Sbjct: 181 IARIDAERNLIMVKGAIPGAPGGKVIV 207 >gi|300857246|ref|YP_003782230.1| 50S ribosomal protein L3 [Clostridium ljungdahlii DSM 13528] gi|300437361|gb|ADK17128.1| 50S ribosomal protein L3 [Clostridium ljungdahlii DSM 13528] Length = 209 Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 127/212 (59%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ RKLGMT ++N G+ IPVTV+ C V+ +T++K+GY AVQVG + + K Sbjct: 1 MKKAILGRKLGMTQIFNENGKVIPVTVIEAGPCAVIQKKTVEKDGYEAVQVGFSDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+G F V+ K+ + EF+++ + G FT G VDV+G++ GKGF Sbjct: 61 VNKPMKGHFEKAGVTLKRFIKEFKLENASEYKE-GQEIKADVFTAGDKVDVSGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR N +HG S HR+ GS G DP R FKN KMAG MG TV NLEV Sbjct: 120 QGTIKRWNAQRGPMSHG-SKFHRAPGSMGACSDPSRTFKNMKMAGHMGNRNTTVLNLEVA 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ +IL+KG VPG K + +R++ K+ Sbjct: 179 KVIPEKNIILIKGGVPGPNK-GLVAIRNTVKA 209 >gi|15896383|ref|NP_349732.1| 50S ribosomal protein L3 [Clostridium acetobutylicum ATCC 824] gi|42559679|sp|Q97EH8|RL3_CLOAB RecName: Full=50S ribosomal protein L3 gi|15026199|gb|AAK81072.1|AE007808_25 Ribosomal protein L3 [Clostridium acetobutylicum ATCC 824] Length = 209 Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 91/214 (42%), Positives = 135/214 (63%), Gaps = 7/214 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +KLGMT ++N EG+ +PVTV+ C V+ +T +K GY A+QVG G + K Sbjct: 1 MKKGILGKKLGMTQIFNEEGKVVPVTVIEAGPCVVIQKKTSEKEGYDAIQVGFGTIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F+ NV K+ + EFR++ D VG+ F G+ VDV+G++ GKGF Sbjct: 61 VNKPLKGHFAKGNVELKRFVKEFRLE-DTSSYEVGAEIKADIFAAGEKVDVSGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRA--THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G ++R +G R +HG S HR+ GS G DP R FK+KKM G MG TV N+E Sbjct: 120 QGTIRR--WGAHRGPMSHG-SKFHRAVGSMGGSSDPSRTFKSKKMPGHMGHVNTTVLNVE 176 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V V ++ LIL+KG VPG K S++++++S K+ Sbjct: 177 VAKVIPEKNLILIKGGVPGPNK-SFVVIKNSVKA 209 >gi|257866529|ref|ZP_05646182.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC30] gi|257870517|ref|ZP_05650170.1| 50S ribosomal protein L3 [Enterococcus gallinarum EG2] gi|257872956|ref|ZP_05652609.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC10] gi|257876133|ref|ZP_05655786.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC20] gi|325567376|ref|ZP_08144043.1| 50S ribosomal protein L3 [Enterococcus casseliflavus ATCC 12755] gi|257800487|gb|EEV29515.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC30] gi|257804681|gb|EEV33503.1| 50S ribosomal protein L3 [Enterococcus gallinarum EG2] gi|257807120|gb|EEV35942.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC10] gi|257810299|gb|EEV39119.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC20] gi|325158809|gb|EGC70955.1| 50S ribosomal protein L3 [Enterococcus casseliflavus ATCC 12755] Length = 209 Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 131/212 (61%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQVKTIENDGYEAIQVGYQDMREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF+ + + L VGS F G ++DVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFK-NVELEGLEVGSEIKVDIFEAGDIIDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK++AGRMGGNR+T++NLE+V Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRITIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R +IL+KG VPGAKK S I ++ + K+ Sbjct: 178 RVDAERNVILIKGNVPGAKK-SLITIKSAVKA 208 >gi|167771267|ref|ZP_02443320.1| hypothetical protein ANACOL_02625 [Anaerotruncus colihominis DSM 17241] gi|167666518|gb|EDS10648.1| hypothetical protein ANACOL_02625 [Anaerotruncus colihominis DSM 17241] Length = 210 Score = 157 bits (398), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 86/212 (40%), Positives = 125/212 (58%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ +V +K+GMT +++ G+ IPVTV+ C VV +T + +GY AVQ+G G+ K Sbjct: 1 MQKCIVGKKIGMTQLFDESGKMIPVTVVEAGPCVVVQKKTTENDGYEAVQLGFGDISEKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F+ V+ K+ L EFR+ D L VG + F VG VDV G++ GKG+ Sbjct: 61 VNKPLKGHFAKAGVALKRVLREFRLD-DCSALSVGDIIKADTFAVGDAVDVAGVSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR L+ THG R GS G P RVFK K + G MG VTV+NL +V Sbjct: 120 AGTIKRFGNHRLKETHGSGPVARHAGSNGACSSPSRVFKGKGLPGHMGAENVTVQNLSIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D + LI ++G +PGA K + + DS K+ Sbjct: 180 KIDAENNLIAIRGAIPGA-KGGVVFITDSVKA 210 >gi|254449764|ref|ZP_05063201.1| ribosomal protein L3 [Octadecabacter antarcticus 238] gi|198264170|gb|EDY88440.1| ribosomal protein L3 [Octadecabacter antarcticus 238] Length = 163 Score = 157 bits (398), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 75/124 (60%), Positives = 95/124 (76%), Gaps = 1/124 (0%) Query: 88 DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGS 147 +++L+ VG S++ GQ VDV+G +IGKGF+GAMKRHNF GLRATHGVS+SHRSHGS Sbjct: 3 EENLIAVGEEIIASHYFEGQFVDVSGTSIGKGFAGAMKRHNFSGLRATHGVSVSHRSHGS 62 Query: 148 TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVR 207 TG QDPG+VFK KKMAG MG ++T +NL V+ D RGLI+VKG VPG+ K W+ V+ Sbjct: 63 TGQCQDPGKVFKGKKMAGHMGSAKITTQNLVVIKTDLDRGLIMVKGAVPGS-KGGWVTVK 121 Query: 208 DSFK 211 D+ K Sbjct: 122 DAVK 125 >gi|325972661|ref|YP_004248852.1| 50S ribosomal protein L3 [Spirochaeta sp. Buddy] gi|324027899|gb|ADY14658.1| 50S ribosomal protein L3 [Spirochaeta sp. Buddy] Length = 206 Score = 157 bits (398), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 90/208 (43%), Positives = 127/208 (61%), Gaps = 5/208 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +GR PVTV+ ++ VV RT +K+GY A +G+ + K ++K Sbjct: 3 GLIGKKVGMTQVFDAQGRLTPVTVIKIEGNVVVGERTDEKHGYSAAVLGSVDKKKSTITK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V PKK + EFR D L VG V F VDVTG T GKG++G Sbjct: 63 PYAGQFTDV-CEPKKHVIEFR--DFDKELTVGEVLGVDIFKDATFVDVTGTTKGKGYAGG 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KRH F G RATHG S HR G T P R FK +MAG MG R+TV+NL+VV VD Sbjct: 120 IKRHGFSGGRATHG-SKFHRDIGGTAMSSTPARTFKGHRMAGHMGNERMTVQNLKVVRVD 178 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 ++ +++VKG +PG + S ++V+ + K Sbjct: 179 EEMQVLMVKGAIPGPAQ-SVVIVKKAIK 205 >gi|300088197|ref|YP_003758719.1| 50S ribosomal protein L3 [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527930|gb|ADJ26398.1| 50S ribosomal protein L3 [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 207 Score = 157 bits (398), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 91/199 (45%), Positives = 124/199 (62%), Gaps = 5/199 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M +G++ +KLGMT VY+ EG+ PVTVL + C VV +T +++GY A Q+G GE K Sbjct: 1 MINGIIGKKLGMTQVYSTEGKMEPVTVLQVGPCTVVQVKTPERDGYTAAQLGFGEDK--K 58 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++K +G + L EFR+ D D + VG+ S F G+ VDVTG++ G+GF Sbjct: 59 LTKAEQGHVKEYGNF--RHLREFRLD-DLDGVEVGARVDASLFVDGERVDVTGISKGRGF 115 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH F G THG S HR+ GS G PGRVFK +MAG MG +VTV L+VV Sbjct: 116 AGTVKRHGFAGGPKTHGQSDRHRAPGSIGATTTPGRVFKGTRMAGHMGNEQVTVSGLKVV 175 Query: 181 SVDDKRGLILVKGCVPGAK 199 D ++ L+LVKG VPGA+ Sbjct: 176 KTDVEKNLLLVKGAVPGAR 194 >gi|154494380|ref|ZP_02033700.1| hypothetical protein PARMER_03735 [Parabacteroides merdae ATCC 43184] gi|218262297|ref|ZP_03476811.1| hypothetical protein PRABACTJOHN_02485 [Parabacteroides johnsonii DSM 18315] gi|154085824|gb|EDN84869.1| hypothetical protein PARMER_03735 [Parabacteroides merdae ATCC 43184] gi|218223448|gb|EEC96098.1| hypothetical protein PRABACTJOHN_02485 [Parabacteroides johnsonii DSM 18315] Length = 205 Score = 157 bits (398), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 88/205 (42%), Positives = 126/205 (61%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EG+ +P TV+ + C V +TL+K+GY AVQ+G E K K+ ++ Sbjct: 3 GLLGKKIGMTSVFSAEGKNLPCTVIEVGPCVVTQIKTLEKDGYEAVQLGFEEKKEKHTTQ 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+PK+ L EF+ + + L G V + Y VDV G + GKGF G Sbjct: 63 PEMGHFKKAGVTPKRYLAEFKNFETEYKL--GDVITVDYLEDAGFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ + THG R+ G G P +VFK +MAG+MG RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRLRAPGGIGACSYPAKVFKGMRMAGQMGNERVTVQNLQVIKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + L+LVKG VPGA K S +L+ Sbjct: 181 MPEHNLLLVKGSVPGA-KGSILLIE 204 >gi|325510539|gb|ADZ22175.1| 50S ribosomal protein L3 [Clostridium acetobutylicum EA 2018] Length = 210 Score = 157 bits (397), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 91/214 (42%), Positives = 135/214 (63%), Gaps = 7/214 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +KLGMT ++N EG+ +PVTV+ C V+ +T +K GY A+QVG G + K Sbjct: 2 MKKGILGKKLGMTQIFNEEGKVVPVTVIEAGPCVVIQKKTSEKEGYDAIQVGFGTIREKL 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F+ NV K+ + EFR++ D VG+ F G+ VDV+G++ GKGF Sbjct: 62 VNKPLKGHFAKGNVELKRFVKEFRLE-DTSSYEVGAEIKADIFAAGEKVDVSGVSKGKGF 120 Query: 121 SGAMKRHNFGGLRA--THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G ++R +G R +HG S HR+ GS G DP R FK+KKM G MG TV N+E Sbjct: 121 QGTIRR--WGAHRGPMSHG-SKFHRAVGSMGGSSDPSRTFKSKKMPGHMGHVNTTVLNVE 177 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V V ++ LIL+KG VPG K S++++++S K+ Sbjct: 178 VAKVIPEKNLILIKGGVPGPNK-SFVVIKNSVKA 210 >gi|225548727|ref|ZP_03769774.1| ribosomal protein L3 [Borrelia burgdorferi 94a] gi|225370757|gb|EEH00193.1| ribosomal protein L3 [Borrelia burgdorferi 94a] Length = 206 Score = 157 bits (397), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 90/209 (43%), Positives = 130/209 (62%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ G +PVTV+ ++ +T+D++GY A+ G+ + K VSK Sbjct: 3 GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKVSK 62 Query: 64 PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + S+ ++ PK+ + E K D G F + VDVTG T GKGF G Sbjct: 63 PIKGQYKSLKDIEPKRCVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D+++ +LVKG VPGA K S+++V+ S K Sbjct: 179 DEEKRALLVKGAVPGA-KGSFVVVKKSKK 206 >gi|119953267|ref|YP_945476.1| 50S ribosomal protein L3 [Borrelia turicatae 91E135] gi|254803656|sp|A1QZR4|RL3_BORT9 RecName: Full=50S ribosomal protein L3 gi|119862038|gb|AAX17806.1| LSU ribosomal protein L3P [Borrelia turicatae 91E135] Length = 209 Score = 157 bits (397), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 133/212 (62%), Gaps = 6/212 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V+ G +PVTV+ + V+ +T++++GY A+ +G+ + + +SK Sbjct: 3 GLIGKKVGMTQVFQGNGVVVPVTVIEFEPNYVIGKKTVERDGYDALIMGSVDLRSSKISK 62 Query: 64 PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P+RG + ++ NV PK+ + EF+ K D G F + VD+TG T GKGF G Sbjct: 63 PIRGQYKNLENVEPKRYVIEFKGLKGYD---AGDEIGLDAFREIKYVDITGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRMGG + T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGEQQTIQNLEVVFI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D+++ ILVKG VPG K S+++V+ + K V Sbjct: 179 DEEKRAILVKGAVPGV-KGSFVIVKKAKKVGV 209 >gi|239817873|ref|YP_002946783.1| 50S ribosomal protein L3 [Variovorax paradoxus S110] gi|259709746|sp|C5CP53|RL3_VARPS RecName: Full=50S ribosomal protein L3 gi|239804450|gb|ACS21517.1| ribosomal protein L3 [Variovorax paradoxus S110] Length = 226 Score = 157 bits (397), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 86/211 (40%), Positives = 128/211 (60%), Gaps = 3/211 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G +PVTV+ + N +V ++ + +GY+A+QV G K V+K Sbjct: 8 GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQIKSQETDGYVALQVTFGSRKASRVTK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDD-LLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFS 121 P G + V + + EFRV D G+V + S F+VGQ VDV G +IGKG++ Sbjct: 68 PQAGHLAKAGVEAGEIIREFRVTADTAGQHKAGAVIAASSVFSVGQKVDVQGTSIGKGYA 127 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHN RA+HG S SH GS G QDPGRVF K+M G +G T +NL+V Sbjct: 128 GTIKRHNMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTKTTQNLDVFR 187 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D+ R L+L+KG +PG+ K ++ VR + K+ Sbjct: 188 IDEARQLLLIKGAIPGS-KGGFVTVRPAIKA 217 >gi|186684510|ref|YP_001867706.1| 50S ribosomal protein L3 [Nostoc punctiforme PCC 73102] gi|226730541|sp|B2ITQ5|RL3_NOSP7 RecName: Full=50S ribosomal protein L3 gi|186466962|gb|ACC82763.1| ribosomal protein L3 [Nostoc punctiforme PCC 73102] Length = 210 Score = 157 bits (397), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 81/197 (41%), Positives = 119/197 (60%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT +++ G IPVTV+ C V +T +GY A+QVG GE K K Sbjct: 1 MSVGILGTKLGMTQIFDEAGVAIPVTVIQAGPCTVTQVKTKQTDGYFAIQVGFGEVKPKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P+ G + + + L E+ D +G F+ GQ+VDV G +IG+GF Sbjct: 61 LNRPLLGHLAKSSAPALRHLNEYHTDSSSDYA-LGQQIKADIFSEGQIVDVVGTSIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KR+NFG +HG S +HR+ GS G PGRV+ K+MAGR+GG R+T++ L +V Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGKRITIRKLTIV 178 Query: 181 SVDDKRGLILVKGCVPG 197 VD +R L+L+KG +PG Sbjct: 179 RVDAERNLLLIKGAIPG 195 >gi|313680515|ref|YP_004058254.1| LSU ribosomal protein l3p [Oceanithermus profundus DSM 14977] gi|313153230|gb|ADR37081.1| LSU ribosomal protein L3P [Oceanithermus profundus DSM 14977] Length = 208 Score = 157 bits (397), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 88/209 (42%), Positives = 125/209 (59%), Gaps = 7/209 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ K+GMT ++ + R IPVTV+ C VV ++ +++GY AVQ+G + K V+K Sbjct: 3 GILGAKVGMTQIWKND-RAIPVTVVLAGPCPVVQRKSPERDGYAAVQLGFVPLEPKRVNK 61 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 PM+G F+ + P + L E R D P G V + F G VDVTG + G+G +G Sbjct: 62 PMKGHFAKFSAEPVRYLREIR-----DFEPEGDVVTVEIFQPGDKVDVTGTSKGRGTAGV 116 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR NF G A+HG HR GS G R+ PGRV+K KKMAG G R+TV+NLEVV V Sbjct: 117 MKRWNFAGGPASHGAHRIHRHGGSIGQRKAPGRVYKGKKMAGHYGAERITVQNLEVVEVI 176 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + L+L+KG +PG ++VR++ + Sbjct: 177 PEENLLLIKGAIPGP-NGGLVVVRETTRD 204 >gi|50913439|ref|YP_059411.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS10394] gi|73917496|sp|Q5XED5|RL3_STRP6 RecName: Full=50S ribosomal protein L3 gi|50902513|gb|AAT86228.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10394] Length = 208 Score = 157 bits (397), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 95/213 (44%), Positives = 132/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ S F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVTV+NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +ILVKG VPGAKK S I ++ + K+A Sbjct: 176 QVILEKNVILVKGNVPGAKK-SLITIKSAVKAA 207 >gi|323703548|ref|ZP_08115194.1| 50S ribosomal protein L3 [Desulfotomaculum nigrificans DSM 574] gi|323531539|gb|EGB21432.1| 50S ribosomal protein L3 [Desulfotomaculum nigrificans DSM 574] Length = 209 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 127/212 (59%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++N EG IPVTV+ C VV +T++ +GY A+Q+G GE + Sbjct: 1 MPVGILGKKVGMTQIFNKEGIAIPVTVVEAGPCVVVQKKTVETDGYNAIQLGFGEKREAL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + V P + L E RV+ D + VG F GQ VDV G + G+GF Sbjct: 61 INKPTKGHLAKAGVRPVRFLRELRVE-DPNAYEVGQEIKADIFNEGQKVDVVGTSKGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNF HG S HR GS+ + P R FK +K+ G G RVTV+NLEVV Sbjct: 120 AGGIKRHNFHRGPMAHG-SKYHRRPGSSAAK-GPARTFKGRKLPGHYGVERVTVQNLEVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+ +KG VPG + +LV++S K+ Sbjct: 178 KVDPERNLLAIKGAVPGP-RGGLLLVKNSVKA 208 >gi|226950933|ref|YP_002806024.1| ribosomal protein L3 [Clostridium botulinum A2 str. Kyoto] gi|254803664|sp|C1FMV1|RL3_CLOBJ RecName: Full=50S ribosomal protein L3 gi|226840834|gb|ACO83500.1| ribosomal protein L3 [Clostridium botulinum A2 str. Kyoto] Length = 209 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 85/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +KLGMT ++N G+ IPVTV+ C V+ +T++K+GY A+QV G+ + K Sbjct: 1 MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP++G F+ VS K+ + EF+++ D + L +G F G+ VD++G++ GKGF Sbjct: 61 RNKPVKGHFAKAGVSVKRHIKEFKLE-DLNSLEIGQEIKADVFEAGERVDISGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G ++R N +HG S HR+ GS G DP R FKNK+M G MG TV NLEVV Sbjct: 120 QGTIRRWNAHRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + ++ LIL+KG VPG K + +R++ K+ Sbjct: 179 RIIPEKNLILIKGGVPGPNK-GLVQIRNTVKA 209 >gi|22536243|ref|NP_687094.1| 50S ribosomal protein L3 [Streptococcus agalactiae 2603V/R] gi|25010133|ref|NP_734528.1| 50S ribosomal protein L3 [Streptococcus agalactiae NEM316] gi|76786764|ref|YP_328784.1| 50S ribosomal protein L3 [Streptococcus agalactiae A909] gi|76798231|ref|ZP_00780481.1| ribosomal protein L3 [Streptococcus agalactiae 18RS21] gi|77406990|ref|ZP_00784005.1| ribosomal protein L3 [Streptococcus agalactiae H36B] gi|77412293|ref|ZP_00788609.1| ribosomal protein L3 [Streptococcus agalactiae CJB111] gi|42559639|sp|Q8E2D1|RL3_STRA5 RecName: Full=50S ribosomal protein L3 gi|42559641|sp|Q8E7T8|RL3_STRA3 RecName: Full=50S ribosomal protein L3 gi|109893560|sp|Q3K3W9|RL3_STRA1 RecName: Full=50S ribosomal protein L3 gi|22533063|gb|AAM98966.1|AE014194_11 ribosomal protein L3 [Streptococcus agalactiae 2603V/R] gi|23094484|emb|CAD45703.1| ribosomal protein L3 [Streptococcus agalactiae NEM316] gi|76561821|gb|ABA44405.1| ribosomal protein L3 [Streptococcus agalactiae A909] gi|76586440|gb|EAO62948.1| ribosomal protein L3 [Streptococcus agalactiae 18RS21] gi|77161683|gb|EAO72678.1| ribosomal protein L3 [Streptococcus agalactiae CJB111] gi|77174395|gb|EAO77249.1| ribosomal protein L3 [Streptococcus agalactiae H36B] gi|319743995|gb|EFV96375.1| 50S ribosomal protein L3 [Streptococcus agalactiae ATCC 13813] Length = 208 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 93/213 (43%), Positives = 132/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ S F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVTV+NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ ++L+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVVLIKGNVPGAKK-SLITIKSAVKAA 207 >gi|37519654|ref|NP_923031.1| 50S ribosomal protein L3 [Gloeobacter violaceus PCC 7421] gi|42559594|sp|Q7NPH0|RL3_GLOVI RecName: Full=50S ribosomal protein L3 gi|35210645|dbj|BAC88026.1| 50S ribosomal protein L3 [Gloeobacter violaceus PCC 7421] Length = 215 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 93/219 (42%), Positives = 127/219 (57%), Gaps = 5/219 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RKLGMT +++ EGR IPVTV+ C V ++ +GY AVQ+G G A+ K Sbjct: 1 MSLGILGRKLGMTQIFDEEGRAIPVTVVEAGPCPVTQVKSEATDGYTAVQLGFGTAREKV 60 Query: 61 VSKPMRGFFSSVNV-SPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +++P G + +P + L EFR+ P G + F GQLVDV G +IGKG Sbjct: 61 LTRPEVGHCKKAGLEAPVRHLREFRLPDSSQYTP-GQQITVDLFAAGQLVDVVGTSIGKG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G KRH+FG HG S +HR+ GS G PGRVF K+M GRMG RVTV+ L V Sbjct: 120 FAGGQKRHHFGRGPMAHG-SKNHRAPGSIGAGTTPGRVFPGKRMPGRMGNERVTVRKLTV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 V V +R +IL++G +PG + +L+ KS KG Sbjct: 179 VRVIPERNVILIQGGLPGVE--GGLLMISPAKSVGRAKG 215 >gi|317507409|ref|ZP_07965143.1| 50S ribosomal protein L3 [Segniliparus rugosus ATCC BAA-974] gi|316254294|gb|EFV13630.1| 50S ribosomal protein L3 [Segniliparus rugosus ATCC BAA-974] Length = 212 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 90/211 (42%), Positives = 121/211 (57%), Gaps = 2/211 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ V RT +++ Y AVQ+ G+ + V+K Sbjct: 2 GLLGAKLGMTQVFDERNRVVPVTVIRTGVNIVTQIRTPERDKYSAVQLAFGQIDPRKVNK 61 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+P++ L E R++ D VG S F G LVDVTG + GKGF+G Sbjct: 62 PLTGQFEKAGVTPRRHLAELRLE-DVSGYEVGQQLDVSVFADGDLVDVTGTSKGKGFAGT 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G A HG HR GS G PGRVFK +MAGRMG + T +NL V VD Sbjct: 121 MKRHGFKGQGAAHGAHKVHRRPGSIGACAFPGRVFKGTRMAGRMGNAKTTTQNLTVFRVD 180 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 + G++L+KG VPG + + VR + K V Sbjct: 181 PEAGVLLIKGAVPG-RDGGLVFVRSAVKKGV 210 >gi|284929561|ref|YP_003422083.1| 50S ribosomal protein L3P [cyanobacterium UCYN-A] gi|284810005|gb|ADB95702.1| LSU ribosomal protein L3P [cyanobacterium UCYN-A] Length = 212 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 88/200 (44%), Positives = 121/200 (60%), Gaps = 7/200 (3%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT +++ E G IPVTV+ + C + +T D +GY A+Q+G E K K Sbjct: 1 MAIGLLGTKLGMTQIFDDETGAAIPVTVMKVGPCTITQIKTSDTDGYNAIQIGYSEVKEK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP--VGSVFSPSYFTVGQLVDVTGMTIG 117 + KP G SP + L E+RV DD+ P +G + F G LVDVTG ++G Sbjct: 61 ALVKPELGHLKKAGASPLRHLKEYRV---DDIQPYQLGETVNVDLFNTGDLVDVTGTSMG 117 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 +GF+G KRHNF THG S SHR GSTG PGRV+ KKMAG+ G ++VT + L Sbjct: 118 RGFAGYQKRHNFKRGNMTHG-SKSHRLPGSTGAGTTPGRVYPGKKMAGQYGASKVTTRRL 176 Query: 178 EVVSVDDKRGLILVKGCVPG 197 +VV +D + L+L+KG +PG Sbjct: 177 KVVQIDAECNLLLIKGAIPG 196 >gi|225552448|ref|ZP_03773388.1| ribosomal protein L3 [Borrelia sp. SV1] gi|225371446|gb|EEH00876.1| ribosomal protein L3 [Borrelia sp. SV1] Length = 206 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 89/209 (42%), Positives = 129/209 (61%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ G +PVTV+ ++ +T+D++GY A+ G+ + K VSK Sbjct: 3 GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKVSK 62 Query: 64 PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + + ++ PK+ + E K D G F + VDVTG T GKGF G Sbjct: 63 PIKGQYKGLKDIEPKRYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D+++ +LVKG VPGA K S+++V+ S K Sbjct: 179 DEEKRALLVKGAVPGA-KGSFVVVKKSKK 206 >gi|75906914|ref|YP_321210.1| 50S ribosomal protein L3 [Anabaena variabilis ATCC 29413] gi|109893410|sp|Q3MFC1|RL3_ANAVT RecName: Full=50S ribosomal protein L3 gi|75700639|gb|ABA20315.1| LSU ribosomal protein L3P [Anabaena variabilis ATCC 29413] Length = 211 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 82/197 (41%), Positives = 120/197 (60%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT +++ G IPVTV+ + C V ++ +GY A+QVG GE K K Sbjct: 1 MSVGILGTKLGMTQIFDEAGVAIPVTVVQVGPCVVTQVKSKQTDGYAAIQVGYGEVKPKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P+ G + + + L E+ D +G F+ G+LVDV G +IG+GF Sbjct: 61 LNRPLLGHLAKSSAPALRHLKEYHTDSSSDYA-LGQEIKADIFSAGELVDVIGTSIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KR+NFG +HG S +HR+ GS G PGRV+ K+MAGR+GG RVT++ L V+ Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGTRVTIRKLTVI 178 Query: 181 SVDDKRGLILVKGCVPG 197 VD +R L+L+KG VPG Sbjct: 179 RVDAERNLLLIKGAVPG 195 >gi|306821620|ref|ZP_07455218.1| 50S ribosomal protein L3 [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550365|gb|EFM38358.1| 50S ribosomal protein L3 [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 207 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 93/201 (46%), Positives = 116/201 (57%), Gaps = 2/201 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +KLGMT ++ +GR IPVTV+ V +T + +GY AVQ GE K KNV+KP Sbjct: 4 IMGKKLGMTQIFAEDGRLIPVTVIEAGPMVVTQIKTKENDGYEAVQCAYGEIKEKNVNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 ++G F V K+ L EF+V D G + + F VG VD + GKGF G + Sbjct: 64 LKGHFKKAGVGSKRHLREFKVANIADYQLAGEI-NVDVFAVGDKVDAVATSKGKGFQGPI 122 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH THG S HR GS G DP RVFK KK+AG MG R T+KNLEVV VD Sbjct: 123 KRHGQSRGPETHG-SHYHRGPGSMGMCSDPSRVFKGKKLAGHMGFERTTIKNLEVVLVDK 181 Query: 185 KRGLILVKGCVPGAKKNSWIL 205 + L+LVKG VPG KK IL Sbjct: 182 DKNLVLVKGSVPGPKKGLVIL 202 >gi|255038089|ref|YP_003088710.1| 50S ribosomal protein L3 [Dyadobacter fermentans DSM 18053] gi|254950845|gb|ACT95545.1| ribosomal protein L3 [Dyadobacter fermentans DSM 18053] Length = 206 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 85/206 (41%), Positives = 126/206 (61%), Gaps = 3/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +YN +G+ + TV+ C V R+ +K+GY A+Q+G GE K KN S Sbjct: 2 SGLIGKKIGMTSLYNADGQALACTVIQAGPCVVTQVRSEEKDGYKAIQLGFGEKKEKNTS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 +P+ G F N +PK+KL EF+ + + L S+ F G+ VDV G G+GF G Sbjct: 62 QPLIGHFKKANTTPKQKLVEFKEFEVEHELGT-SLSVQDIFEEGEFVDVVGSAKGRGFQG 120 Query: 123 AMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG+ THG R GS G P RVFK +M GRMG NRV ++NL ++ Sbjct: 121 VVKRHGFGGVGGQTHGQHNRARHPGSIGACSFPSRVFKGIRMGGRMGNNRVKIQNLRILK 180 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ +++V G VPG+ KNS++++ Sbjct: 181 VIPEQNILVVSGSVPGS-KNSFLIIE 205 >gi|291547982|emb|CBL21090.1| 50S ribosomal protein L3, bacterial [Ruminococcus sp. SR1/5] Length = 210 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 124/212 (58%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G IPVTVL C V +T + +GY +VQVG GE + K Sbjct: 1 MKKAILATKVGMTQIFNEDGMLIPVTVLQAGPCVVTQVKTEENDGYTSVQVGFGEIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G F V+ K+ + EFR + VG F G +D T ++ GKGF Sbjct: 61 VNKPEKGHFDKAGVAVKRFVKEFRFDNAGE-YEVGQEIKADIFAAGDHIDATAVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G DP +VFK K M G MG +VTV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKHMPGHMGHVQVTVQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + L+LVKG VPG KK S + ++++ KS Sbjct: 179 RVDTENNLLLVKGAVPGPKK-SLVTIKETVKS 209 >gi|322410858|gb|EFY01766.1| 50S ribosomal protein L3 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 208 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 93/213 (43%), Positives = 132/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTETGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VGS + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSEITVDTFVAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVT++NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTIQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207 >gi|258591316|emb|CBE67615.1| 50S ribosomal subunit protein L3 [NC10 bacterium 'Dutch sediment'] Length = 210 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 85/199 (42%), Positives = 121/199 (60%), Gaps = 3/199 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA-GEAKVK 59 M G++ +K+GMT ++ G +PVT++ C +V RT +GY AVQ+G E K + Sbjct: 1 MGIGLLGKKVGMTQLFGESGNAVPVTIIEAGPCPIVQLRTSSTDGYEAVQIGYRAERKTR 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQ-KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 ++KP++G F V+P+K L EFR++ +D VG + + F G+ V VTG+T GK Sbjct: 61 RIAKPLKGHFDKAKVTPQKYLREFRLKTQDSSKYTVGEILTVGLFEAGEKVQVTGITKGK 120 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G +KR + G THG S+ HR+ GS G P RVFK M GRMG +R TVK L+ Sbjct: 121 GFQGGVKRWGYLGGPETHG-SMFHRAPGSIGASSFPSRVFKGHHMPGRMGTDRATVKGLQ 179 Query: 179 VVSVDDKRGLILVKGCVPG 197 VV + ++ L+LVKG VPG Sbjct: 180 VVKILPEQNLVLVKGAVPG 198 >gi|187734815|ref|YP_001876927.1| ribosomal protein L3 [Akkermansia muciniphila ATCC BAA-835] gi|226725123|sp|B2UMU0|RL3_AKKM8 RecName: Full=50S ribosomal protein L3 gi|187424867|gb|ACD04146.1| ribosomal protein L3 [Akkermansia muciniphila ATCC BAA-835] Length = 211 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 91/214 (42%), Positives = 129/214 (60%), Gaps = 7/214 (3%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ +K+GMT +++ E G +PVTV+ + +T DK+GY A+QV K Sbjct: 1 MALGLIGKKVGMTRLFDQESGAMVPVTVIDVKGNTFAQIKTEDKDGYNAIQVAFDAQKES 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP--SYFTVGQLVDVTGMTIG 117 V+KP G F + + P K L EFRV+ + LP P F+ GQ VDV G + G Sbjct: 61 RVAKPQAGHFKKLGIQPTKLLKEFRVEASE--LPAEGAKDPGVDLFSAGQWVDVIGTSKG 118 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF GAM+RHNF G A HG S+ HR G G PGRV+KN+KM G+MG + TV+NL Sbjct: 119 KGFQGAMRRHNFHGSPAAHG-SMMHRRTGGVGGCSTPGRVWKNQKMPGQMGNAKRTVQNL 177 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +VV+V + +IL+ G VPGA + S++++R + K Sbjct: 178 KVVAVRPEDNVILISGAVPGA-RGSYLVIRPAKK 210 >gi|154706152|ref|YP_001425182.1| 50S ribosomal protein L3 [Coxiella burnetii Dugway 5J108-111] gi|189042840|sp|A9KD31|RL3_COXBN RecName: Full=50S ribosomal protein L3 gi|154355438|gb|ABS76900.1| LSU ribosomal protein L3P [Coxiella burnetii Dugway 5J108-111] Length = 217 Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 87/212 (41%), Positives = 125/212 (58%), Gaps = 1/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK GMT ++ G IPVTV+ + ++ +T++ +GY A QV G+ Sbjct: 1 MSIGLIGRKCGMTRIFTETGSSIPVTVVEVIPNRITQVKTVETDGYRAFQVAYGKKSSAR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G +S V L EFR+ ++ G F GQ+VDV G+T GKG Sbjct: 61 VNKPLAGHYSKAAVEAGNALREFRLGNEELTEAKAGDELKVDIFKEGQVVDVRGLTRGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +K HNF ATHG S+SHR+ GS G Q PGRV+K KKMAG++G TV++ E+ Sbjct: 121 FAGTVKHHNFRTQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGQLGNVYCTVQSQEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 + VD +R L+L+KG +PGA I+ + S K Sbjct: 181 IKVDVERNLLLIKGALPGAPGGEVIITQSSKK 212 >gi|28212175|ref|NP_783119.1| 50S ribosomal protein L3 [Clostridium tetani E88] gi|42559625|sp|Q890N9|RL3_CLOTE RecName: Full=50S ribosomal protein L3 gi|28204619|gb|AAO37056.1| LSU ribosomal protein L3P [Clostridium tetani E88] Length = 209 Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 86/212 (40%), Positives = 128/212 (60%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ RKLGMT +++ R +PVTV+ C VV ++++K+GY A+QVG GE + K Sbjct: 1 MKKAIIGRKLGMTQIFDENNRVVPVTVVEAGPCTVVQKKSVEKDGYEAIQVGYGEIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F V + L EF+++ + VG F G+ +DVTG + GKG+ Sbjct: 61 VNKPLKGHFEKAGVGLSRMLREFKLENVSE-YQVGQEIKVDIFEAGEKIDVTGTSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR N +HG S HR+ GS G P R FKNK+MAG MG + TV NLEVV Sbjct: 120 QGIIKRWNAHRGPMSHG-SKFHRAVGSMGAASYPARTFKNKRMAGHMGNVKSTVLNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 ++ LIL+KG +PG K ++++R+S K+ Sbjct: 179 KTIPEKNLILIKGGIPGPNK-GYVIIRNSIKA 209 >gi|3915827|sp|P94267|RL3_BORBU RecName: Full=50S ribosomal protein L3 Length = 206 Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 89/209 (42%), Positives = 129/209 (61%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ G +PVTV+ ++ +T+D++GY A+ G+ + K VSK Sbjct: 3 GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKVSK 62 Query: 64 PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + S+ ++ PK+ + E K D G F + VDVTG T GKGF G Sbjct: 63 PIKGQYKSLKDIEPKRYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRM GN+ T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMAGNQQTIQNLEVVLI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D+++ +LVKG VPGA K S+++V+ S K Sbjct: 179 DEEKRALLVKGAVPGA-KGSFVVVKKSKK 206 >gi|225020386|ref|ZP_03709578.1| hypothetical protein CORMATOL_00393 [Corynebacterium matruchotii ATCC 33806] gi|305680123|ref|ZP_07402933.1| 50S ribosomal protein L3 [Corynebacterium matruchotii ATCC 14266] gi|224946775|gb|EEG27984.1| hypothetical protein CORMATOL_00393 [Corynebacterium matruchotii ATCC 33806] gi|305660743|gb|EFM50240.1| 50S ribosomal protein L3 [Corynebacterium matruchotii ATCC 14266] Length = 218 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 82/196 (41%), Positives = 117/196 (59%), Gaps = 5/196 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT +++ +PVTV+ C + RT + +GY A+Q+ G+ + V K Sbjct: 8 GLLGKKLGMTQIFDENNHVVPVTVVEAGPCVITQIRTQETDGYTAIQIAYGDIDPRKVKK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 P G F+ V+P++ + E R+ DD+ +G + + F VDVTG+T GKGF+ Sbjct: 68 PQAGHFNKAGVTPRRHVAEIRM---DDVSGYELGQEITANIFDGITFVDVTGITKGKGFA 124 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F G A HG SHR G G PGRVFK K+MAGRMG +RVT +NL++ Sbjct: 125 GGMKRHGFAGQGAGHGNQASHRRVGGIGACATPGRVFKGKRMAGRMGQDRVTTQNLKIQK 184 Query: 182 VDDKRGLILVKGCVPG 197 +D LIL+KG +PG Sbjct: 185 IDADANLILIKGAIPG 200 >gi|290581289|ref|YP_003485681.1| 50S ribosomal protein L3 [Streptococcus mutans NN2025] gi|254998188|dbj|BAH88789.1| 50S ribosomal protein L3 [Streptococcus mutans NN2025] Length = 208 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG + F G +VDVTG T GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGQEITVEQFEAGDVVDVTGTTKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G P RVFK K +AGRMGGNRVT++NLE+V Sbjct: 118 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGNRVTIQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I+++ + K+A Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLIIIKSAVKAA 207 >gi|319796217|ref|YP_004157857.1| 50S ribosomal protein l3 [Variovorax paradoxus EPS] gi|315598680|gb|ADU39746.1| 50S ribosomal protein L3 [Variovorax paradoxus EPS] Length = 226 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 88/216 (40%), Positives = 128/216 (59%), Gaps = 13/216 (6%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G +PVTV+ + N +V ++ + +GY+A+QV G K V+K Sbjct: 8 GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQIKSQETDGYVALQVTFGSRKASRVTK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRV-------QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116 P G + V + + EFRV K ++ GSVFS VGQ VDV G +I Sbjct: 68 PEAGHLAKAGVEAGEIIQEFRVTAETAGQHKAGGVIAAGSVFS-----VGQKVDVQGTSI 122 Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 GKGF+G +KRHN RA+HG S SH GS G QDPGRVF K+M G +G T +N Sbjct: 123 GKGFAGTIKRHNMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTKTTQN 182 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 L+V +D+ R L+L+KG +PG+ K ++ VR + K+ Sbjct: 183 LDVFRIDEARQLLLIKGAIPGS-KGGFVTVRPAIKA 217 >gi|307244784|ref|ZP_07526885.1| 50S ribosomal protein L3 [Peptostreptococcus stomatis DSM 17678] gi|306491882|gb|EFM63934.1| 50S ribosomal protein L3 [Peptostreptococcus stomatis DSM 17678] Length = 209 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 93/212 (43%), Positives = 129/212 (60%), Gaps = 8/212 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V+ G +PVTV+ + +T++ +GY A+QVG +AK K ++K Sbjct: 3 GILGKKIGMTQVFTENGEVVPVTVVEAGPVSITQIKTVENDGYQAIQVGFVDAKEKALNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 P +G + V K+KL EFRV D L VG F G+ +DVTG++ GKGF Sbjct: 63 PQKGHLAKAGVL-KRKLKEFRV---DSLEGYEVGQELKADIFAEGEKIDVTGISKGKGFQ 118 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRH THG S HR GS G PGRVFKNKK+AG MG +VTV+NLEVV Sbjct: 119 GPIKRHGQSRGPETHG-SRYHRRPGSMGACSYPGRVFKNKKLAGHMGSVKVTVQNLEVVK 177 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD ++ L+L+KG +PGA K S + V+ + K + Sbjct: 178 VDAEKNLLLIKGAIPGA-KGSVVTVKAAIKGS 208 >gi|222152265|ref|YP_002561440.1| 50S ribosomal protein L3 [Streptococcus uberis 0140J] gi|254803695|sp|B9DSV0|RL3_STRU0 RecName: Full=50S ribosomal protein L3 gi|222113076|emb|CAR40439.1| 50S ribosomal protein L3 [Streptococcus uberis 0140J] Length = 208 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 93/213 (43%), Positives = 132/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VGS + F+ G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSEITVESFSAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207 >gi|218131327|ref|ZP_03460131.1| hypothetical protein BACEGG_02938 [Bacteroides eggerthii DSM 20697] gi|217986259|gb|EEC52596.1| hypothetical protein BACEGG_02938 [Bacteroides eggerthii DSM 20697] Length = 205 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 84/205 (40%), Positives = 126/205 (61%), Gaps = 3/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EG+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYQAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PKK L EF+ + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFEGADFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + L+L+KG VPG K + I+ + Sbjct: 181 IAEHNLLLIKGSVPGCKGSIVIIEK 205 >gi|300870647|ref|YP_003785518.1| 50S ribosomal protein L3 [Brachyspira pilosicoli 95/1000] gi|42559690|sp|Q9FA04|RL3_BRAPL RecName: Full=50S ribosomal protein L3 gi|11036693|gb|AAG27264.1| putative L3 ribosomal protein [Brachyspira pilosicoli] gi|300688346|gb|ADK31017.1| 50S ribosomal protein L3 [Brachyspira pilosicoli 95/1000] Length = 218 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 82/195 (42%), Positives = 115/195 (58%), Gaps = 2/195 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT V++ G I VTV+ C V+ R +K+GY A+Q+G G K K++ K Sbjct: 3 GIIGRKLGMTTVFDETGNAIAVTVVEAGPCTVMQVRDNEKDGYNAIQLGYGAVKEKHLKK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F N+ PKK L EFR+ D VG F G +DV+ ++ G+GF+G Sbjct: 63 PQIGQFKKANLEPKKYLKEFRLD-DSSAYTVGQELKVDIFQAGDFIDVSSLSKGRGFAGV 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHN+ G +HG + R+ GS GC P RV+K K M G MG T++NL+VV + Sbjct: 122 MKRHNYDGGPMSHGSNFRRRA-GSIGCNSYPARVWKGKGMPGHMGNTLTTIQNLKVVEIR 180 Query: 184 DKRGLILVKGCVPGA 198 + LI++KG +PGA Sbjct: 181 PEDNLIMIKGSIPGA 195 >gi|253701922|ref|YP_003023111.1| 50S ribosomal protein L3 [Geobacter sp. M21] gi|259646547|sp|C6E4Q7|RL3_GEOSM RecName: Full=50S ribosomal protein L3 gi|251776772|gb|ACT19353.1| ribosomal protein L3 [Geobacter sp. M21] Length = 211 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT ++ +GRRI VTV+ C VV +++ K+GY A+QVG G Sbjct: 1 MNKGLIGKKLGMTQIFAEDGRRIAVTVVEAGPCVVVQKKSVAKDGYSAIQVGLGAKDASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + G E R+ + D +G V + F G LVDVTG +IGKGF Sbjct: 61 ANAAQIGHCKGAGAGVFTHYRELRMD-NTDAYNLGDVIEAAVFEEGDLVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR F G R++HG S HR+ GS GC P RVFKNKKM G++G +VTV+ L+VV Sbjct: 120 AGVIKRWGFKGGRSSHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQLGNEKVTVQRLKVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD LIL+ G +PG+ N +L++DS K+ Sbjct: 179 RVDAADNLILLGGAIPGS-ANGVVLIKDSVKA 209 >gi|225027478|ref|ZP_03716670.1| hypothetical protein EUBHAL_01734 [Eubacterium hallii DSM 3353] gi|224955213|gb|EEG36422.1| hypothetical protein EUBHAL_01734 [Eubacterium hallii DSM 3353] Length = 209 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 88/212 (41%), Positives = 128/212 (60%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++ +G IPVTVL C+V +T++ +GY AVQVG + + K Sbjct: 1 MKKAILATKIGMTQIFAEDGELIPVTVLQAGPCEVTQVKTVENDGYSAVQVGFQDMREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KPM+G F VS K+ + EF++ D + +G + F G VD T ++ GKGF Sbjct: 61 STKPMKGHFEKAGVSVKRFVREFKLD-DAENYELGQKITVDVFEAGDKVDATAISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH THG S HR GS G DP +V K KKM G+MG ++T++NLEVV Sbjct: 120 QGAIKRHGQHTGPKTHG-SKYHRHAGSNGMASDPSKVMKGKKMPGQMGHVQITIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D + +ILVKG VPG KK S + ++ + K+ Sbjct: 179 KIDAENNVILVKGSVPGPKK-SLVTLKAAVKA 209 >gi|312866521|ref|ZP_07726738.1| 50S ribosomal protein L3 [Streptococcus downei F0415] gi|311097952|gb|EFQ56179.1| 50S ribosomal protein L3 [Streptococcus downei F0415] Length = 208 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 94/213 (44%), Positives = 130/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VGS + F G +VDVTG T GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSELTVEQFEAGDVVDVTGTTKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+ Sbjct: 118 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIA 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V + +IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVVPEMNVILIKGNVPGAKK-SLITIKTAVKAA 207 >gi|197117323|ref|YP_002137750.1| 50S ribosomal protein L3 [Geobacter bemidjiensis Bem] gi|226725180|sp|B5EFQ0|RL3_GEOBB RecName: Full=50S ribosomal protein L3 gi|197086683|gb|ACH37954.1| ribosomal protein L3 [Geobacter bemidjiensis Bem] Length = 211 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT ++ +GRRI VTV+ C VV +++ K+GY A+QVG G Sbjct: 1 MNKGLIGKKLGMTQIFAEDGRRIAVTVVEAGPCVVVQKKSVAKDGYSAIQVGFGAKDASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + G E R+ + D +G V + F G LVDVTG +IGKGF Sbjct: 61 ANAAQVGHCKGAGAGVFTHYRELRMD-NTDAYKLGDVIEAAVFEEGDLVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR F G R++HG S HR+ GS GC P RVFKNKKM G++G +VTV+ L+VV Sbjct: 120 AGVIKRWGFKGGRSSHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQLGNEKVTVQRLKVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD LIL+ G +PG+ N +L++DS K+ Sbjct: 179 RVDAADNLILLGGAIPGS-ANGVVLIKDSVKA 209 >gi|241765217|ref|ZP_04763200.1| ribosomal protein L3 [Acidovorax delafieldii 2AN] gi|241365097|gb|EER59976.1| ribosomal protein L3 [Acidovorax delafieldii 2AN] Length = 224 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 86/216 (39%), Positives = 128/216 (59%), Gaps = 13/216 (6%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G +PVTV+ + N +V +T + +GY+A+QV G K V+K Sbjct: 8 GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVALQVTFGSRKASRVTK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDD-------LLPVGSVFSPSYFTVGQLVDVTGMTI 116 P G + V + + EFRV + +PV VF+ VGQ VDV G +I Sbjct: 68 PEAGHLAKAGVEAGEIIQEFRVTAETAGKYAAGAAVPVADVFA-----VGQKVDVQGTSI 122 Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 GKG++G +KRHN RA+HG S SH GS G QDPGRVF K+M G +G T +N Sbjct: 123 GKGYAGTIKRHNMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTKTTQN 182 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 L+V+ +D+ R L+L+KG +PG+ K ++ VR + K+ Sbjct: 183 LDVIRIDEARQLLLIKGAIPGS-KGGFVTVRPAVKA 217 >gi|77409988|ref|ZP_00786570.1| ribosomal protein L3 [Streptococcus agalactiae COH1] gi|77171404|gb|EAO74691.1| ribosomal protein L3 [Streptococcus agalactiae COH1] Length = 208 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGIFGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ S F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVTV+NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ ++L+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVVLIKGNVPGAKK-SLITIKSAVKAA 207 >gi|281423839|ref|ZP_06254752.1| 50S ribosomal protein L3 [Prevotella oris F0302] gi|299141147|ref|ZP_07034284.1| 50S ribosomal protein L3 [Prevotella oris C735] gi|281402066|gb|EFB32897.1| 50S ribosomal protein L3 [Prevotella oris F0302] gi|298577107|gb|EFI48976.1| 50S ribosomal protein L3 [Prevotella oris C735] Length = 204 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 84/205 (40%), Positives = 124/205 (60%), Gaps = 5/205 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T +K+GY A+Q+G EAK SK Sbjct: 3 GLIGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTEEKDGYKALQLGFEEAKENRTSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 PM G F +PKK L EF+ ++ +L G + F + VD+ G + GKGF G Sbjct: 63 PMMGTFKKAGTTPKKHLAEFKFDEEHNL---GDTITVELFADAKFVDIVGTSKGKGFQGV 119 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ ++THG R GS G P +VFK +MAG+MGG+RVT +NL+V+ V Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLQVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + L+LVKG V G S +L++ Sbjct: 180 IPEHNLLLVKGSVAGC-NGSTVLIK 203 >gi|110639535|ref|YP_679744.1| 50S ribosomal protein L3 [Cytophaga hutchinsonii ATCC 33406] gi|123163229|sp|Q11QB2|RL3_CYTH3 RecName: Full=50S ribosomal protein L3 gi|110282216|gb|ABG60402.1| LSU ribosomal protein L3P [Cytophaga hutchinsonii ATCC 33406] Length = 206 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 85/206 (41%), Positives = 125/206 (60%), Gaps = 3/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT VY+ G +P TV+ C + +T++ +GY AVQ+ + K K+ + Sbjct: 2 SGIIGKKVGMTSVYDAVGNYVPCTVIEAGPCVITQIKTVETDGYKAVQLAFDDKKEKSTT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F VSPK+KL EF+ +++L S+ + F G VDV G G+GF G Sbjct: 62 KPLLGHFKKAGVSPKRKLVEFK-GFENELTLGQSLAAQDVFVEGDFVDVVGTAKGRGFQG 120 Query: 123 AMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG+ THG R GS G P RVFK +MAGRMG NRV ++NL+++ Sbjct: 121 VVKRHGFGGVGGQTHGQHNRARHAGSIGACSFPARVFKGTRMAGRMGNNRVKIQNLQILK 180 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V + L++V G VPG+ KNS++L+ Sbjct: 181 VYPEHNLLVVSGSVPGS-KNSYVLIE 205 >gi|119511179|ref|ZP_01630296.1| 50S ribosomal protein L3 [Nodularia spumigena CCY9414] gi|119464167|gb|EAW45087.1| 50S ribosomal protein L3 [Nodularia spumigena CCY9414] Length = 211 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 83/197 (42%), Positives = 119/197 (60%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT V++ G IPVTV+ C V +T +GY A+Q+G GE K K Sbjct: 1 MSVGILGTKLGMTQVFDEAGVSIPVTVVQAGPCTVTQVKTKQTDGYSAIQLGYGEVKPKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P+ G + + + L E+ D +G F+ GQ+VDV G +IG+GF Sbjct: 61 LNRPLLGHLAKSSAPALRHLNEYHTDSPSDYA-LGQELKADIFSEGQIVDVVGTSIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KR+NFG +HG S +HR+ GS G PGRV+ K+MAGR+GG RVT++ L VV Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGTRVTIRKLTVV 178 Query: 181 SVDDKRGLILVKGCVPG 197 VD +R L+L+KG +PG Sbjct: 179 RVDLERNLLLIKGAIPG 195 >gi|289548391|ref|YP_003473379.1| 50S ribosomal protein L3 [Thermocrinis albus DSM 14484] gi|289182008|gb|ADC89252.1| 50S ribosomal protein L3 [Thermocrinis albus DSM 14484] Length = 234 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 91/198 (45%), Positives = 121/198 (61%), Gaps = 3/198 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT V+ +G +PVTV+ ++ VV R +K+GY AVQVGA AK KN Sbjct: 1 MPIGLIGTKVGMTRVFLKDGTAVPVTVIKIEPNYVVAVRRQEKDGYNAVQVGAFPAKEKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKG 119 ++KP G + P ++L EFRV D D VG F G+LVDV G++ G+G Sbjct: 61 LTKPELGHLKKAGLPPLRRLKEFRVD-DPDQYQVGQELRVEQIFQPGELVDVVGISKGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+GAMKR +FGG +HG HR+ GS G R DPGRV+K K+MAG G + V+ L V Sbjct: 120 FAGAMKRWDFGGFPKSHG-HRYHRAVGSIGQRTDPGRVWKGKRMAGHWGAETIRVQALLV 178 Query: 180 VSVDDKRGLILVKGCVPG 197 V V + L+LVKG VPG Sbjct: 179 VDVVPEENLLLVKGSVPG 196 >gi|94985967|ref|YP_605331.1| 50S ribosomal protein L3 [Deinococcus geothermalis DSM 11300] gi|122986549|sp|Q1IX72|RL3_DEIGD RecName: Full=50S ribosomal protein L3 gi|94556248|gb|ABF46162.1| ribosomal protein L3 [Deinococcus geothermalis DSM 11300] Length = 207 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 91/211 (43%), Positives = 120/211 (56%), Gaps = 7/211 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT ++ + R +PVTV+ C VV +T +GY AVQ+G K Sbjct: 1 MTKGILGTKIGMTQIWKGD-RAVPVTVVLAGPCPVVQRKTKLTDGYEAVQLGFAPKSEKR 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++P G F V+P + L EFR D P G + F G+ +D TG + GKG Sbjct: 60 VNRPELGHFKKAGVAPMRFLREFR-----DFAPEGDTVNVDIFAEGEKIDATGTSKGKGT 114 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G MKR NF G A+HG HR GS G R+ PGRV+K K+MAG MG RVTV+NLEVV Sbjct: 115 QGVMKRWNFAGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGHMGMERVTVQNLEVV 174 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V LILVKG +PGA +++R + K Sbjct: 175 EVRADENLILVKGAIPGA-NGGLVMLRQAAK 204 >gi|226356897|ref|YP_002786637.1| 50S ribosomal protein L3 [Deinococcus deserti VCD115] gi|226318887|gb|ACO46883.1| putative 50S ribosomal protein L3 [Deinococcus deserti VCD115] Length = 206 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 89/195 (45%), Positives = 115/195 (58%), Gaps = 6/195 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ K+GMT ++ + R +PVTV+ C VV +T +GY AVQ+G K V++ Sbjct: 3 GILGTKVGMTQIWKGD-RAVPVTVVLAGPCPVVQRKTSVSDGYEAVQIGFAPKSEKRVNR 61 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F VSP + L EFR + P G S F G+ +D TG + GKGF G Sbjct: 62 PAAGHFKKYGVSPVRFLREFR-----NFNPDGDTVSVDIFAEGEKIDATGTSKGKGFQGV 116 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR NF G A+HG HR GS G R+ PGRV+K K+MAG MG +R+TV+NLEVV V Sbjct: 117 MKRWNFKGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGHMGMDRITVQNLEVVEVR 176 Query: 184 DKRGLILVKGCVPGA 198 LILVKG +PGA Sbjct: 177 ADENLILVKGAIPGA 191 >gi|291291685|gb|ADD91676.1| 50S ribosomal protein L3 [Enterococcus faecium] Length = 209 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 93/214 (43%), Positives = 131/214 (61%), Gaps = 8/214 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQVKTMETDGYEAIQVGYQDMREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118 +KP +G + N +PK+ + EF K+ +L VG + F G ++DVTG T GK Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNVELGEYEVGKEITVDVFQAGDIIDVTGTTKGK 117 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVT++NLE Sbjct: 118 GFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGP-VTPNRVFKNKRLAGRMGGNRVTIQNLE 175 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VV VD +R +IL+KG VPGAKK S I ++ + K+ Sbjct: 176 VVRVDAERNVILIKGNVPGAKK-SLITIKSAVKA 208 >gi|116628598|ref|YP_821217.1| 50S ribosomal protein L3 [Streptococcus thermophilus LMD-9] gi|122266808|sp|Q03IF1|RL3_STRTD RecName: Full=50S ribosomal protein L3 gi|116101875|gb|ABJ67021.1| LSU ribosomal protein L3P [Streptococcus thermophilus LMD-9] gi|312279259|gb|ADQ63916.1| 50S ribosomal protein L3 [Streptococcus thermophilus ND03] Length = 208 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VGS + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSEITVDIFEAGDIVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKTA 207 >gi|302379782|ref|ZP_07268266.1| 50S ribosomal protein L3 [Finegoldia magna ACS-171-V-Col3] gi|302312370|gb|EFK94367.1| 50S ribosomal protein L3 [Finegoldia magna ACS-171-V-Col3] Length = 209 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 90/208 (43%), Positives = 128/208 (61%), Gaps = 3/208 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT ++N +G +PVTV+ V +T +K GY A+QVG E K K+V++P Sbjct: 4 ILGKKIGMTQIFNEDGSVVPVTVIEAGPMVVTQIKTKEKEGYNAIQVGYIEKKEKHVNQP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 MRG F VS KK L EF++ DD+ +G F G +VDV G++ GKG GA+ Sbjct: 64 MRGHFGKAGVSFKKHLREFKIN-DDEQFNLGDEIKLDIFQDGDVVDVIGISKGKGTQGAI 122 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 RHN+ HG S SHR G+ P RVFK +K G+MG +RVTV+NL++V VD+ Sbjct: 123 VRHNYSRGPMGHG-SKSHRVAGARSAGSYPARVFKGRKGFGKMGHDRVTVQNLKIVKVDN 181 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPG K + VR++ KS Sbjct: 182 ERNLLLIKGAVPG-NKGGVVTVREAIKS 208 >gi|187934203|ref|YP_001884473.1| 50S ribosomal protein L3 [Clostridium botulinum B str. Eklund 17B] gi|188590013|ref|YP_001919672.1| 50S ribosomal protein L3 [Clostridium botulinum E3 str. Alaska E43] gi|251780648|ref|ZP_04823568.1| 50S ribosomal protein L3 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|226725151|sp|B2UYB0|RL3_CLOBA RecName: Full=50S ribosomal protein L3 gi|226725152|sp|B2TIH5|RL3_CLOBB RecName: Full=50S ribosomal protein L3 gi|187722356|gb|ACD23577.1| 50S ribosomal protein L3 [Clostridium botulinum B str. Eklund 17B] gi|188500294|gb|ACD53430.1| 50S ribosomal protein L3 [Clostridium botulinum E3 str. Alaska E43] gi|243084963|gb|EES50853.1| 50S ribosomal protein L3 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 209 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 88/212 (41%), Positives = 129/212 (60%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT ++N G+ IPVTV+ C VV +T++K+GY A+QVG G+ + K Sbjct: 1 MKKAIMGKKIGMTQIFNEAGKVIPVTVVEAGPCVVVQKKTVEKDGYEAIQVGFGDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G F V K+ L EFR++ D VG F +G +DV+G++ GKGF Sbjct: 61 VNKPAKGHFEKAGVVLKRTLKEFRLE-DVSQYEVGQEIKADVFEIGDKIDVSGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR N THG S R+ GS G DP R FKNK+M G MG TV NLEVV Sbjct: 120 QGVIKRWNQQRGPMTHG-SKFKRAPGSMGASSDPSRTFKNKRMPGHMGCVNTTVMNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ L+L+KG +PG K + +++R++ K+ Sbjct: 179 KVIAEKNLLLIKGGIPGPNKGT-VVIRNAVKA 209 >gi|78189807|ref|YP_380145.1| 50S ribosomal protein L3 [Chlorobium chlorochromatii CaD3] gi|109893419|sp|Q3APH3|RL3_CHLCH RecName: Full=50S ribosomal protein L3 gi|78172006|gb|ABB29102.1| LSU ribosomal protein L3P [Chlorobium chlorochromatii CaD3] Length = 209 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 88/207 (42%), Positives = 123/207 (59%), Gaps = 1/207 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT ++N + + TV+ +C V + DK GY A QV GE K + VSKP Sbjct: 4 ILGKKIGMTRLFNEKREAVSCTVIEAGSCFVTQIKRTDKEGYDAYQVSYGERKEQKVSKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 ++G + V+P L EF + + L VGS S F VG+ V+V G++ GKGF+G + Sbjct: 64 LQGHYKKAGVTPGYTLVEFSFAELNQELAVGSQVSVEGFNVGEKVNVLGVSKGKGFAGVV 123 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR+NFGG THG S R+ GS G DP RVFK +MAGR G +TVKNLE+ V Sbjct: 124 KRYNFGGGSRTHGQSDRLRAPGSVGGSSDPSRVFKGTRMAGRKGSANITVKNLEIFKVMP 183 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211 + LI+VKG +PG NS++ + S K Sbjct: 184 ESNLIVVKGSIPGP-NNSYVKIISSKK 209 >gi|326792607|ref|YP_004310428.1| 50S ribosomal protein L3 [Clostridium lentocellum DSM 5427] gi|326543371|gb|ADZ85230.1| 50S ribosomal protein L3 [Clostridium lentocellum DSM 5427] Length = 209 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 123/212 (58%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT +++ IPVTVL C V +T++ +GY A+QVG GE K K+ Sbjct: 1 MKKAILGKKIGMTQIFDENANLIPVTVLEAGPCVVTQKKTMENDGYEAIQVGFGEVKSKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V KP+ G F+ V KK L EFR++ D VG+ F G VDV G + GKG+ Sbjct: 61 VIKPVAGHFAKAGVEAKKFLKEFRLE-DTSAYEVGTEIKADAFAAGDKVDVVGTSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+K++ HG S SHR GS G PGRV K K + MG +VTV+NLEV Sbjct: 120 QGAIKKYGQSRGPMGHG-SKSHRVAGSMGAATSPGRVMKGKGLPSHMGCVQVTVQNLEVA 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + LIL+KG VPG K + I ++DS K+ Sbjct: 179 RVDADKNLILIKGAVPGP-KGTIITIKDSCKA 209 >gi|291280148|ref|YP_003496983.1| 50S ribosomal protein L3 [Deferribacter desulfuricans SSM1] gi|290754850|dbj|BAI81227.1| 50S ribosomal protein L3 [Deferribacter desulfuricans SSM1] Length = 214 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 98/212 (46%), Positives = 127/212 (59%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVK 59 M SG++ +K+GMT V+ EG IPVTVL + C VV + +K+GY A+Q+G + K+K Sbjct: 1 MLSGLLGKKIGMTQVFTSEGLVIPVTVLQVGPCVVVQKKVKEKDGYNALQIGFEKVTKLK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KPM G F NV P K L E +V D+ G + F G VDV G++ GKG Sbjct: 61 KVNKPMLGHFKKHNVEPLKYLKEVKVDNPDEFNE-GQEITVEIFNEGDFVDVQGISKGKG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKRH F G A+HG + HR+ GS G + PG K +KM GRMGG +VTV LEV Sbjct: 120 FQGVMKRHGFAGGPASHGSNF-HRAPGSVGMCEFPGETPKGRKMPGRMGGEKVTVMGLEV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V V + L+LVKG VPG NS + VR + K Sbjct: 179 VKVIPDKNLVLVKGAVPG-HNNSLVYVRKAVK 209 >gi|148244329|ref|YP_001219023.1| 50S ribosomal protein L3 [Candidatus Vesicomyosocius okutanii HA] gi|226730587|sp|A5CXK4|RL3_VESOH RecName: Full=50S ribosomal protein L3 gi|146326156|dbj|BAF61299.1| 50S ribosomal protein L3 [Candidatus Vesicomyosocius okutanii HA] Length = 241 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 89/207 (42%), Positives = 130/207 (62%), Gaps = 9/207 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG------ 54 M +V +K+GMT + + +G +PV+V+ ++ ++V RT+D +GY A+QV G Sbjct: 1 MAIDLVGQKIGMTRLISDDGSIMPVSVIKIEPNRIVQTRTIDIDGYRAIQVTTGKKVNKK 60 Query: 55 -EAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113 EAKV+ +S ++G ++ + L+EF+++ D+ + + S F G VDV G Sbjct: 61 GEAKVRRISAAIKGHYAKASQEIGLGLWEFKLE--DNEITNATSIDISLFGAGHYVDVIG 118 Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 + GKGF G +K HNF ATHG SISHR+ GSTG Q+PGRVFK KKMAG MG +VT Sbjct: 119 KSKGKGFQGGVKLHNFQMQDATHGNSISHRAIGSTGQCQEPGRVFKGKKMAGHMGNKQVT 178 Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKK 200 + L+VV VD ++ +ILVKG +PGA K Sbjct: 179 QECLKVVKVDIEKSVILVKGSIPGAIK 205 >gi|329962267|ref|ZP_08300273.1| 50S ribosomal protein L3 [Bacteroides fluxus YIT 12057] gi|328530375|gb|EGF57252.1| 50S ribosomal protein L3 [Bacteroides fluxus YIT 12057] Length = 205 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 84/205 (40%), Positives = 126/205 (61%), Gaps = 3/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EG+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYEAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PKK L EF+ + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFNDAAFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + L+L+KG VPG K + I+ + Sbjct: 181 IAEHNLLLIKGSVPGCKGSIVIIEK 205 >gi|114567841|ref|YP_754995.1| 50S ribosomal protein L3 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122317284|sp|Q0AUI0|RL3_SYNWW RecName: Full=50S ribosomal protein L3 gi|114338776|gb|ABI69624.1| LSU ribosomal protein L3P [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 212 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 85/211 (40%), Positives = 127/211 (60%), Gaps = 4/211 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 + ++ K+GMT +++ + +PV+++ C V+ + ++ +GY ++QVG K K Sbjct: 5 KKAIMGIKIGMTQIFDENDKAVPVSIIEAGPCTVLQKKKVESDGYESIQVGFYNLKEKLA 64 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP RG F NV P + + EFR+ DD VG + FT G LVDV G + GKGF+ Sbjct: 65 NKPARGHFKKANVKPLRYIKEFRIDNVDD-YDVGQEITADIFTTGDLVDVIGTSKGKGFA 123 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNF HG S HR GS G + P RVFK +K+ GR+GG RVTV+ L+VV Sbjct: 124 GGVKRHNFARGSMGHG-SKYHRRPGSLGAK-GPARVFKGRKLPGRLGGERVTVQGLKVVK 181 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V R LIL+KG +PG K+ ++++++S K Sbjct: 182 VYPDRNLILIKGSIPGPKR-GFVIIKNSVKE 211 >gi|256819982|ref|YP_003141261.1| 50S ribosomal protein L3 [Capnocytophaga ochracea DSM 7271] gi|315225401|ref|ZP_07867215.1| 50S ribosomal protein L3 [Capnocytophaga ochracea F0287] gi|256581565|gb|ACU92700.1| ribosomal protein L3 [Capnocytophaga ochracea DSM 7271] gi|314944674|gb|EFS96709.1| 50S ribosomal protein L3 [Capnocytophaga ochracea F0287] Length = 205 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 83/205 (40%), Positives = 127/205 (61%), Gaps = 4/205 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP T++ C V RT + +GY A+Q+G + K + Sbjct: 2 SGLIGKKVGMTSIFDENGKNIPCTIIEAGPCVVTQVRTKEVDGYDALQLGFDDKAEKRAT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F S KKK+ EF Q +D +G + +FT G+ VD+TG++ GKGF G Sbjct: 62 KAELGHFKKAGTSVKKKVVEF--QGFEDNYKLGDTITVDFFTEGEFVDITGVSKGKGFQG 119 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 ++RH FGG+ + THG R+ GS G P RVFK +MAGRMG +VTV+NL+V+ Sbjct: 120 VVRRHGFGGVGQTTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 V ++ L++VKGC+PG KN+++ + Sbjct: 180 VVAEKNLLVVKGCIPG-HKNAYVTI 203 >gi|167764372|ref|ZP_02436497.1| hypothetical protein BACSTE_02756 [Bacteroides stercoris ATCC 43183] gi|167697777|gb|EDS14356.1| hypothetical protein BACSTE_02756 [Bacteroides stercoris ATCC 43183] Length = 205 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 84/205 (40%), Positives = 126/205 (61%), Gaps = 3/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EG+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYQAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PKK L EF+ + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFEGADYVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + L+L+KG VPG K + I+ + Sbjct: 181 IAEHNLLLIKGSVPGCKGSIVIIEK 205 >gi|160888399|ref|ZP_02069402.1| hypothetical protein BACUNI_00812 [Bacteroides uniformis ATCC 8492] gi|270294752|ref|ZP_06200953.1| 50S ribosomal protein L3 [Bacteroides sp. D20] gi|317477751|ref|ZP_07936944.1| 50S ribosomal protein L3 [Bacteroides sp. 4_1_36] gi|156862076|gb|EDO55507.1| hypothetical protein BACUNI_00812 [Bacteroides uniformis ATCC 8492] gi|270273999|gb|EFA19860.1| 50S ribosomal protein L3 [Bacteroides sp. D20] gi|316906096|gb|EFV27857.1| 50S ribosomal protein L3 [Bacteroides sp. 4_1_36] Length = 205 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 84/205 (40%), Positives = 126/205 (61%), Gaps = 3/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EG+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYEAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PKK L EF+ + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFNDATFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + L+L+KG VPG K + I+ + Sbjct: 181 IAEHNLLLIKGSVPGCKGSIVIIEK 205 >gi|227550720|ref|ZP_03980769.1| 50S ribosomal protein L3 [Enterococcus faecium TX1330] gi|257878725|ref|ZP_05658378.1| ribosomal protein L3 [Enterococcus faecium 1,230,933] gi|257881366|ref|ZP_05661019.1| ribosomal protein L3 [Enterococcus faecium 1,231,502] gi|257885634|ref|ZP_05665287.1| ribosomal protein L3 [Enterococcus faecium 1,231,501] gi|257888021|ref|ZP_05667674.1| ribosomal protein L3 [Enterococcus faecium 1,141,733] gi|257890584|ref|ZP_05670237.1| ribosomal protein L3 [Enterococcus faecium 1,231,410] gi|257893174|ref|ZP_05672827.1| ribosomal protein L3 [Enterococcus faecium 1,231,408] gi|257896360|ref|ZP_05676013.1| ribosomal protein L3 [Enterococcus faecium Com12] gi|257899334|ref|ZP_05678987.1| ribosomal protein L3 [Enterococcus faecium Com15] gi|258615211|ref|ZP_05712981.1| 50S ribosomal protein L3 [Enterococcus faecium DO] gi|260558287|ref|ZP_05830483.1| ribosomal protein L3 [Enterococcus faecium C68] gi|261206993|ref|ZP_05921682.1| ribosomal protein L3 [Enterococcus faecium TC 6] gi|289565372|ref|ZP_06445822.1| 50S ribosomal protein L3 [Enterococcus faecium D344SRF] gi|293379446|ref|ZP_06625590.1| 50S ribosomal protein L3 [Enterococcus faecium PC4.1] gi|293562946|ref|ZP_06677413.1| ribosomal protein L3 [Enterococcus faecium E1162] gi|293567931|ref|ZP_06679272.1| ribosomal protein L3 [Enterococcus faecium E1071] gi|293570684|ref|ZP_06681734.1| ribosomal protein L3 [Enterococcus faecium E980] gi|294615393|ref|ZP_06695266.1| ribosomal protein L3 [Enterococcus faecium E1636] gi|294618320|ref|ZP_06697901.1| ribosomal protein L3 [Enterococcus faecium E1679] gi|294621078|ref|ZP_06700269.1| ribosomal protein L3 [Enterococcus faecium U0317] gi|314937608|ref|ZP_07844934.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133a04] gi|314942893|ref|ZP_07849706.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133C] gi|314947971|ref|ZP_07851375.1| 50S ribosomal protein L3 [Enterococcus faecium TX0082] gi|314950888|ref|ZP_07853957.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133A] gi|314991464|ref|ZP_07856941.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133B] gi|314995015|ref|ZP_07860135.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133a01] gi|227180181|gb|EEI61153.1| 50S ribosomal protein L3 [Enterococcus faecium TX1330] gi|257812953|gb|EEV41711.1| ribosomal protein L3 [Enterococcus faecium 1,230,933] gi|257817024|gb|EEV44352.1| ribosomal protein L3 [Enterococcus faecium 1,231,502] gi|257821490|gb|EEV48620.1| ribosomal protein L3 [Enterococcus faecium 1,231,501] gi|257824075|gb|EEV51007.1| ribosomal protein L3 [Enterococcus faecium 1,141,733] gi|257826944|gb|EEV53570.1| ribosomal protein L3 [Enterococcus faecium 1,231,410] gi|257829553|gb|EEV56160.1| ribosomal protein L3 [Enterococcus faecium 1,231,408] gi|257832925|gb|EEV59346.1| ribosomal protein L3 [Enterococcus faecium Com12] gi|257837246|gb|EEV62320.1| ribosomal protein L3 [Enterococcus faecium Com15] gi|260075461|gb|EEW63767.1| ribosomal protein L3 [Enterococcus faecium C68] gi|260078621|gb|EEW66323.1| ribosomal protein L3 [Enterococcus faecium TC 6] gi|289162862|gb|EFD10712.1| 50S ribosomal protein L3 [Enterococcus faecium D344SRF] gi|291589516|gb|EFF21323.1| ribosomal protein L3 [Enterococcus faecium E1071] gi|291591767|gb|EFF23403.1| ribosomal protein L3 [Enterococcus faecium E1636] gi|291595414|gb|EFF26726.1| ribosomal protein L3 [Enterococcus faecium E1679] gi|291599314|gb|EFF30340.1| ribosomal protein L3 [Enterococcus faecium U0317] gi|291605072|gb|EFF34539.1| ribosomal protein L3 [Enterococcus faecium E1162] gi|291609156|gb|EFF38428.1| ribosomal protein L3 [Enterococcus faecium E980] gi|292641969|gb|EFF60135.1| 50S ribosomal protein L3 [Enterococcus faecium PC4.1] gi|313590741|gb|EFR69586.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133a01] gi|313593944|gb|EFR72789.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133B] gi|313596897|gb|EFR75742.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133A] gi|313598365|gb|EFR77210.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133C] gi|313642985|gb|EFS07565.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133a04] gi|313645569|gb|EFS10149.1| 50S ribosomal protein L3 [Enterococcus faecium TX0082] Length = 209 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 93/214 (43%), Positives = 131/214 (61%), Gaps = 8/214 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQVKTMETDGYEAIQVGYQDMREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118 +KP +G + N +PK+ + EF K+ +L VG + F G ++DVTG T GK Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNVELGEYEVGKEITVDVFQAGDIIDVTGTTKGK 117 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVT++NLE Sbjct: 118 GFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTIQNLE 175 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VV VD +R +IL+KG VPGAKK S I ++ + K+ Sbjct: 176 VVRVDAERNVILIKGNVPGAKK-SLITIKSAVKA 208 >gi|213962845|ref|ZP_03391105.1| 50S ribosomal protein L3 [Capnocytophaga sputigena Capno] gi|213954502|gb|EEB65824.1| 50S ribosomal protein L3 [Capnocytophaga sputigena Capno] Length = 225 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 83/205 (40%), Positives = 127/205 (61%), Gaps = 4/205 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP T++ C V RT + +GY A+Q+G + K + Sbjct: 22 SGLIGKKVGMTSIFDENGKNIPCTIIEAGPCVVTQVRTKEVDGYDALQLGFDDKAEKRAT 81 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F S KKK+ EF Q +D +G + +FT G+ VD+TG++ GKGF G Sbjct: 82 KAELGHFKKAGTSVKKKVVEF--QGFEDNYKLGDTITVDFFTEGEFVDITGVSKGKGFQG 139 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 ++RH FGG+ + THG R+ GS G P RVFK +MAGRMG +VTV+NL+V+ Sbjct: 140 VVRRHGFGGVGQTTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVLK 199 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 V ++ L++VKGC+PG KN+++ + Sbjct: 200 VVAEKNLLVVKGCIPG-HKNAYVTI 223 >gi|319900924|ref|YP_004160652.1| LSU ribosomal protein L3P [Bacteroides helcogenes P 36-108] gi|319415955|gb|ADV43066.1| LSU ribosomal protein L3P [Bacteroides helcogenes P 36-108] Length = 205 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 84/205 (40%), Positives = 126/205 (61%), Gaps = 3/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EG+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PKK L EF+ + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFNDATFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + L+L+KG VPG K + I+ + Sbjct: 181 IAEHNLLLIKGSVPGCKGSIVIIEK 205 >gi|317968817|ref|ZP_07970207.1| 50S ribosomal protein L3 [Synechococcus sp. CB0205] Length = 215 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 86/197 (43%), Positives = 121/197 (61%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ EGR IPVTV+ C++ +T +GY AVQ+G G+ + K Sbjct: 1 MSIGILGKKLGMSQFFDDEGRAIPVTVIEAGPCRITQLKTDSTDGYTAVQLGFGDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKP +G + + L E+RV D L +G + + F GQ VDV+G TIG+GF Sbjct: 61 VSKPAKGHLAKSGDELLRHLKEYRVDSVDG-LELGGDVTVAAFEAGQKVDVSGDTIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F THG S +HR GSTG PGRV+ K+MAGR GG ++T + L ++ Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRVYPGKRMAGRYGGKQITTRGLTIL 178 Query: 181 SVDDKRGLILVKGCVPG 197 VD +R L++VKG VPG Sbjct: 179 KVDAERNLLVVKGSVPG 195 >gi|303230114|ref|ZP_07316883.1| 50S ribosomal protein L3 [Veillonella atypica ACS-134-V-Col7a] gi|303231226|ref|ZP_07317964.1| 50S ribosomal protein L3 [Veillonella atypica ACS-049-V-Sch6] gi|302514133|gb|EFL56137.1| 50S ribosomal protein L3 [Veillonella atypica ACS-049-V-Sch6] gi|302515175|gb|EFL57148.1| 50S ribosomal protein L3 [Veillonella atypica ACS-134-V-Col7a] Length = 213 Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 132/213 (61%), Gaps = 5/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ +KLGMT V+ EG+ +PVTV+ VV +T++ +GY AVQ+G G K K+ Sbjct: 1 MSKAILGKKLGMTQVFTAEGQLVPVTVVETTPSVVVRVKTVETDGYEAVQIGYGSIKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP++G F V+P K L E RV D VG + F G+LVDV G GKGF Sbjct: 61 LTKPVKGQFDKAGVAPVKYLREVRVDSAADYT-VGQTLAADIFAEGELVDVVGTGKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTG--CRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KRHNF THG S SHR GS G G+V+K KK+ G+MGG RVTV+ L Sbjct: 120 AGTIKRHNFSRGPETHG-SKSHREPGSIGPMISGGGGKVYKGKKLPGQMGGYRVTVQRLS 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VV VD +R L+LVKG +PGA K S ++VR++ K Sbjct: 179 VVKVDAERNLLLVKGGIPGA-KGSLVMVRNTVK 210 >gi|145219061|ref|YP_001129770.1| 50S ribosomal protein L3 [Prosthecochloris vibrioformis DSM 265] gi|189042857|sp|A4SCQ9|RL3_PROVI RecName: Full=50S ribosomal protein L3 gi|145205225|gb|ABP36268.1| LSU ribosomal protein L3P [Chlorobium phaeovibrioides DSM 265] Length = 209 Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 119/202 (58%), Gaps = 1/202 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT +YN + +P T++ C V ++ +GY A QVG GE K V+KP Sbjct: 4 ILGKKIGMTRLYNEKREAVPCTIIQAGPCFVTQVKSAGIDGYDAYQVGIGERKEAKVTKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M G + V+P EF D L GS FT G++V V G++ GKGF+G + Sbjct: 64 MLGHYKKAGVAPGYMTAEFDTSMFDGELTAGSPVLVESFTEGEIVKVQGVSKGKGFAGVV 123 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHNFGG + THG S R+ GS G DP + FK KM GRMG + +TV+NL+V+ + Sbjct: 124 KRHNFGGGQRTHGQSDRLRAPGSIGGASDPSKTFKGTKMGGRMGSDTITVRNLQVIKIMP 183 Query: 185 KRGLILVKGCVPGAKKNSWILV 206 + LI+VKG VPG KNS++ + Sbjct: 184 ESSLIMVKGSVPGP-KNSYVRI 204 >gi|228478031|ref|ZP_04062642.1| 50S ribosomal protein L3 [Streptococcus salivarius SK126] gi|312862472|ref|ZP_07722715.1| 50S ribosomal protein L3 [Streptococcus vestibularis F0396] gi|322374045|ref|ZP_08048579.1| 50S ribosomal protein L3 [Streptococcus sp. C150] gi|322515867|ref|ZP_08068809.1| 50S ribosomal protein L3 [Streptococcus vestibularis ATCC 49124] gi|228250211|gb|EEK09464.1| 50S ribosomal protein L3 [Streptococcus salivarius SK126] gi|311102115|gb|EFQ60315.1| 50S ribosomal protein L3 [Streptococcus vestibularis F0396] gi|321277011|gb|EFX54082.1| 50S ribosomal protein L3 [Streptococcus sp. C150] gi|322125654|gb|EFX96981.1| 50S ribosomal protein L3 [Streptococcus vestibularis ATCC 49124] Length = 208 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 94/213 (44%), Positives = 131/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VGS + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSEITVDTFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLEVV Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207 >gi|169630900|ref|YP_001704549.1| 50S ribosomal protein L3 [Mycobacterium abscessus ATCC 19977] gi|169242867|emb|CAM63895.1| 50S ribosomal protein L3 [Mycobacterium abscessus] Length = 205 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 86/204 (42%), Positives = 123/204 (60%), Gaps = 7/204 (3%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V++ R +PVTV+ V RT +++GY AVQ+ GE + V+KP+ G F++ Sbjct: 1 MTQVFDDNNRVVPVTVVKAGPNVVTRIRTTEQDGYSAVQLAYGEISPRKVTKPVTGQFAA 60 Query: 72 VNVSPKKKLFEFRVQKDDDL----LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRH 127 ++P++ L E R+ DD+ VG + F+ G VDVTG + GKGF+G MKRH Sbjct: 61 AGINPRRHLAELRL--DDEAAAAEYEVGQELTAEIFSDGAYVDVTGTSKGKGFAGTMKRH 118 Query: 128 NFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRG 187 F G A+HG HR GS G PGRVFK +M+GRMG +RVT +NL V VD + G Sbjct: 119 GFRGQGASHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGSDRVTTQNLVVHKVDAENG 178 Query: 188 LILVKGCVPGAKKNSWILVRDSFK 211 ++L+KG +PG +K ++VR + K Sbjct: 179 VLLIKGAIPG-RKGGLVVVRTAVK 201 >gi|269798550|ref|YP_003312450.1| ribosomal protein L3 [Veillonella parvula DSM 2008] gi|282849864|ref|ZP_06259247.1| 50S ribosomal protein L3 [Veillonella parvula ATCC 17745] gi|294792794|ref|ZP_06757941.1| 50S ribosomal protein L3 [Veillonella sp. 6_1_27] gi|294794548|ref|ZP_06759684.1| 50S ribosomal protein L3 [Veillonella sp. 3_1_44] gi|313893076|ref|ZP_07826653.1| 50S ribosomal protein L3 [Veillonella sp. oral taxon 158 str. F0412] gi|269095179|gb|ACZ25170.1| ribosomal protein L3 [Veillonella parvula DSM 2008] gi|282580301|gb|EFB85701.1| 50S ribosomal protein L3 [Veillonella parvula ATCC 17745] gi|294454878|gb|EFG23251.1| 50S ribosomal protein L3 [Veillonella sp. 3_1_44] gi|294456693|gb|EFG25056.1| 50S ribosomal protein L3 [Veillonella sp. 6_1_27] gi|313442429|gb|EFR60844.1| 50S ribosomal protein L3 [Veillonella sp. oral taxon 158 str. F0412] Length = 213 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 132/213 (61%), Gaps = 5/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ +KLGMT V+ EG+ +PVTV+ VV +T++ +GY AVQ+G G K K+ Sbjct: 1 MSKAILGKKLGMTQVFTAEGQLVPVTVVETTPSVVVRVKTVETDGYEAVQIGYGSIKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP++G F V+P K L E RV D VG + F G+LVDV G GKGF Sbjct: 61 LTKPVKGQFDKAGVAPVKYLREVRVANAADYT-VGQTLAADIFAEGELVDVVGTGKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTG--CRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KRHNF THG S SHR GS G G+V+K KK+ G+MGG RVTV+ L Sbjct: 120 AGTIKRHNFSRGPETHG-SKSHREPGSIGPMISGGGGKVYKGKKLPGQMGGYRVTVQRLS 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VV VD +R L+LVKG +PGA K S ++VR++ K Sbjct: 179 VVKVDAERNLLLVKGGIPGA-KGSLVMVRNTVK 210 >gi|317485822|ref|ZP_07944686.1| 50S ribosomal protein L3 [Bilophila wadsworthia 3_1_6] gi|316922928|gb|EFV44150.1| 50S ribosomal protein L3 [Bilophila wadsworthia 3_1_6] Length = 209 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 85/206 (41%), Positives = 123/206 (59%), Gaps = 2/206 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 + G++ RKLGMT ++ +G + VTV+ C V +T + +GY A+Q+ EAK K+V Sbjct: 4 KMGILGRKLGMTRIFAGDGSAVAVTVVQAGPCPVTQVKTAETDGYNALQIAFEEAKEKHV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KPM+G F+ + +K+ E R+ VG+V + F G + VTG ++GKG+ Sbjct: 64 TKPMKGHFAKAGTALYRKVREIRLD-GPAAYEVGAVLTADVFAAGDKIKVTGTSLGKGYQ 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G M+R NF G + THG HRS GS G PG VFK +KMAG G +VTV+ LE+V Sbjct: 123 GVMRRWNFKGSKDTHGCEKVHRSGGSIGNNTFPGHVFKGRKMAGHWGAEQVTVQGLEIVD 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V + +IL++G VPG KN +LVR Sbjct: 183 VRTEDNVILIRGSVPGP-KNGLVLVR 207 >gi|119358191|ref|YP_912835.1| 50S ribosomal protein L3 [Chlorobium phaeobacteroides DSM 266] gi|166233130|sp|A1BJ34|RL3_CHLPD RecName: Full=50S ribosomal protein L3 gi|119355540|gb|ABL66411.1| LSU ribosomal protein L3P [Chlorobium phaeobacteroides DSM 266] Length = 209 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 82/202 (40%), Positives = 122/202 (60%), Gaps = 1/202 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT +YN + I T++ C V + +K+GY A Q+G GE K V+KP Sbjct: 4 ILGKKIGMTRLYNDKREAISCTIIQAGPCFVTQVKHAEKDGYDAYQIGIGERDEKKVNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M G + V+P K+ EF + + L G+ S F G+ ++V G++ GKGF+G + Sbjct: 64 MLGHYKKAGVTPGYKIAEFSKSEINLELEAGAPLDLSVFKEGEKINVLGVSKGKGFAGVV 123 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHNFGG THG S R+ GS G DP R F+ +MAGRMGG +TVKNLE++ + Sbjct: 124 KRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFRGTRMAGRMGGCNITVKNLEIIRIMP 183 Query: 185 KRGLILVKGCVPGAKKNSWILV 206 + L++VKG +PG KNS++ + Sbjct: 184 ESNLLVVKGAIPGP-KNSYVKI 204 >gi|319952196|ref|YP_004163463.1| lsu ribosomal protein l3p [Cellulophaga algicola DSM 14237] gi|319420856|gb|ADV47965.1| LSU ribosomal protein L3P [Cellulophaga algicola DSM 14237] Length = 205 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 86/206 (41%), Positives = 125/206 (60%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ L C V RT + +GY A+Q+G + K + Sbjct: 2 SGLIGKKVGMTSIFDENGKNIPCTVIELGPCVVTQVRTEEVDGYSALQLGFDDKAEKRAN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F VSPKKK+ EFR + +G F G+ VD G++ GKGF G Sbjct: 62 KAETGHFKKAGVSPKKKVVEFR--DFEGGYKLGDTIGVDLFVEGEFVDAIGISKGKGFQG 119 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH F G+ +ATHG R+ GS G P RVFK KMAGRMG ++VTV+NL+V+ Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSVGAASYPARVFKGMKMAGRMGTDKVTVQNLKVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L+++KGCVPG KN+++ + Sbjct: 180 VVPEKNLLVLKGCVPG-HKNAYVTIE 204 >gi|150020845|ref|YP_001306199.1| 50S ribosomal protein L3 [Thermosipho melanesiensis BI429] gi|166234604|sp|A6LLL3|RL3_THEM4 RecName: Full=50S ribosomal protein L3 gi|149793366|gb|ABR30814.1| ribosomal protein L3 [Thermosipho melanesiensis BI429] Length = 205 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 89/195 (45%), Positives = 119/195 (61%), Gaps = 5/195 (2%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RKLGMT V+ + + +PVTV+ C VV +T++ +GY AVQ+G EAK V+KP Sbjct: 4 IIGRKLGMTRVF-VGDKVVPVTVIKAGPCFVVQKKTIETDGYNAVQLGFEEAK--KVNKP 60 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M G F V+P K L EFRV+ D D VG F+ G +D+TG + G+GF+GAM Sbjct: 61 MEGVFKKAGVNPLKVLKEFRVE-DPDKFEVGQEIKVDIFSEGDKIDITGWSKGRGFAGAM 119 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR F G +HG HR GS G +P R+FK KKM G+ G RVT+ N E+V +D Sbjct: 120 KRWGFRGGPKSHGAKF-HRELGSVGQHSEPARIFKGKKMPGQYGNERVTILNSEIVKIDV 178 Query: 185 KRGLILVKGCVPGAK 199 + LI VKG VPGA+ Sbjct: 179 ENNLIAVKGGVPGAR 193 >gi|329116829|ref|ZP_08245546.1| 50S ribosomal protein L3 [Streptococcus parauberis NCFD 2020] gi|326907234|gb|EGE54148.1| 50S ribosomal protein L3 [Streptococcus parauberis NCFD 2020] Length = 208 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 93/213 (43%), Positives = 130/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTETGEFIPVTVIEAAANVVLQVKTIETDGYEAVQVGFDDKREIL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VGS + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSEITVDTFVAGDIVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNAILIKGNVPGAKK-SLITIKSAVKAA 207 >gi|156312295|ref|XP_001617804.1| hypothetical protein NEMVEDRAFT_v1g225779 [Nematostella vectensis] gi|156195878|gb|EDO25704.1| predicted protein [Nematostella vectensis] Length = 205 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 84/206 (40%), Positives = 128/206 (62%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ RK+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G + K K+ + Sbjct: 2 SGLIGRKIGMTSLFDENGKNIPCTVIEAGPCVVTQVRTEEVDGYNALQLGFDDKKAKSSN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K + G F + K+K+ EF Q ++ +G + +F G+ VDV+G++ GKGF G Sbjct: 62 KALDGHFKKAGATAKRKVVEF--QGFEEEYKLGDSITVEHFEEGEFVDVSGISKGKGFQG 119 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG+ +ATHG R+ GS G P RVFK +MAGRMGG +V V+NL V+ Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGEKVKVQNLRVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V + L++VKG +PG KNS++ ++ Sbjct: 180 VVADKNLLVVKGAIPG-HKNSYVTIQ 204 >gi|291166879|gb|EFE28925.1| 50S ribosomal protein L3 [Filifactor alocis ATCC 35896] Length = 210 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 88/211 (41%), Positives = 129/211 (61%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+S ++ +K+GMT +++ G IPVTV+ V +T + +GY AVQVG GE K K+ Sbjct: 1 MKS-IMGKKIGMTQIFDENGVMIPVTVVEAGPVVVTQIKTEETDGYNAVQVGFGEVKEKH 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+G F+ V+ KK + E R + + + F VG+ +DVTG++ GKGF Sbjct: 60 VNKPMKGHFAKAGVALKKHVKELRPEDGVENYSLAQEIKVDIFEVGEKIDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G++KRH THG S HR+ GS G DP +V K KK+ G MG RVT++NLEV Sbjct: 120 QGSIKRHGQSRGPETHG-SHYHRAPGSMGSASDPSKVRKGKKLPGHMGHTRVTIQNLEVA 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD ++ LIL+KG +PG KK ++++ + K Sbjct: 179 RVDAEKNLILIKGAIPGPKKG-LVVIKTAVK 208 >gi|110004229|emb|CAK98567.1| 50s ribosomal protein l3 [Spiroplasma citri] Length = 258 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 131/208 (62%), Gaps = 6/208 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT ++ +GR IPVTV+ ++ V+ T ++NGY A+Q+ + ++ VSK Sbjct: 3 GILGRKIGMTQIFATDGRLIPVTVVEVEPNVVLRVLTKEQNGYQALQLAVEDKRISLVSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G F N +PK+ + E R + D G + FT G+ VDVTG + GKGF+G+ Sbjct: 63 PDQGQFKKANTTPKRFVKEIR---NMDGYNPGDIIKADIFTAGEFVDVTGTSKGKGFTGS 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KRHN+ HG S HR GS G P R+ K+KKM G MG +VT++NLEV+++D Sbjct: 120 IKRHNYSRGPMGHG-SGYHRGVGSMGAIA-PNRILKSKKMPGHMGTKKVTIQNLEVIAID 177 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 ++ +LVKG +PG KK +++++++ K Sbjct: 178 TEKNALLVKGSIPGPKKQ-FVIIKEAIK 204 >gi|55821905|ref|YP_140347.1| 50S ribosomal protein L3 [Streptococcus thermophilus LMG 18311] gi|55823821|ref|YP_142262.1| 50S ribosomal protein L3 [Streptococcus thermophilus CNRZ1066] gi|81820218|sp|Q5LXR1|RL3_STRT1 RecName: Full=50S ribosomal protein L3 gi|81820383|sp|Q5M2B3|RL3_STRT2 RecName: Full=50S ribosomal protein L3 gi|55737890|gb|AAV61532.1| 50S ribosomal protein L3 [Streptococcus thermophilus LMG 18311] gi|55739806|gb|AAV63447.1| 50S ribosomal protein L3 [Streptococcus thermophilus CNRZ1066] Length = 208 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VGS + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSEITVDIFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207 >gi|148243215|ref|YP_001228372.1| 50S ribosomal protein L3 [Synechococcus sp. RCC307] gi|166234603|sp|A5GVW0|RL3_SYNR3 RecName: Full=50S ribosomal protein L3 gi|147851525|emb|CAK29019.1| 50S ribosomal protein L3 [Synechococcus sp. RCC307] Length = 215 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 88/211 (41%), Positives = 127/211 (60%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ EGR +PVTV+ C++ +T +GY AVQVG G+ + K Sbjct: 1 MSIGILGKKLGMSQFFDDEGRAVPVTVIEAGPCRITQVKTPTNDGYSAVQVGFGDVREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++P +G + L E+RV D + +GS + F GQ VDV+G T+G+GF Sbjct: 61 VNQPAKGHLKKSGEDLLRHLKEYRVDSTDGV-ELGSSVTVDAFEPGQKVDVSGDTMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRH F THG S +HR GSTG PGR++ K+MAGR GG + TVK L V+ Sbjct: 120 SGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGTKTTVKGLVVL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L++VKG VPG K + + +R + + Sbjct: 179 KVDSERNLLVVKGSVPG-KPGALLSIRPAVR 208 >gi|239623347|ref|ZP_04666378.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239522313|gb|EEQ62179.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 226 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 90/211 (42%), Positives = 122/211 (57%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N G +PVTVL C V +T + +GY AVQVG + + K Sbjct: 16 MKKAILATKVGMTQIFNENGALVPVTVLQAGPCVVTQVKTAENDGYKAVQVGFVDKREKL 75 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKP+RG F VS K+ + EF+ + ++ V F G +D T ++ GKGF Sbjct: 76 VSKPLRGHFDKAGVSYKRYVREFKFENAEEY-SVKDEIKADIFAAGDKIDATAISKGKGF 134 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR+ HG S HR GS G PGRVFK K M G MG ++TV+NLEVV Sbjct: 135 QGAIKRYGQHRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGHMGSKKITVQNLEVV 193 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD LILVKG VPG KK S + ++++ K Sbjct: 194 KVDTDNNLILVKGAVPGPKK-SLVTIKETVK 223 >gi|1685371|gb|AAB36822.1| ribosomal protein L3 [Borrelia burgdorferi] Length = 206 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 89/209 (42%), Positives = 129/209 (61%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ G +PVTV+ ++ +T+D++GY A+ G+ + K VSK Sbjct: 3 GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKVSK 62 Query: 64 PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + S+ ++ PK+ + E K D G F + VDVTG T GKGF G Sbjct: 63 PIKGQYKSLKDIEPKRYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRM GN+ T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMAGNQQTIQNLEVVLI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D+++ +LVKG VPGA K S+++V+ S K Sbjct: 179 DEEKRALLVKGPVPGA-KGSFVVVKKSKK 206 >gi|24380367|ref|NP_722322.1| 50S ribosomal protein L3 [Streptococcus mutans UA159] gi|42559636|sp|Q8DS16|RL3_STRMU RecName: Full=50S ribosomal protein L3 gi|24378386|gb|AAN59628.1|AE015024_20 50S ribosomal protein L3 [Streptococcus mutans UA159] Length = 208 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 94/213 (44%), Positives = 131/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + + +PK+ + EF K+ + L VG + F G +VDVTG T GKGF Sbjct: 61 SNKPAKGHVAKADTAPKRFIREF---KNIEGLEVGQEITVEQFEAGDVVDVTGTTKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G P RVFK K +AGRMGGNRVTV+NLEVV Sbjct: 118 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGNRVTVQNLEVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I+++ + K+A Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLIIIKSAVKAA 207 >gi|322418364|ref|YP_004197587.1| 50S ribosomal protein L3 [Geobacter sp. M18] gi|320124751|gb|ADW12311.1| 50S ribosomal protein L3 [Geobacter sp. M18] Length = 211 Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 88/212 (41%), Positives = 125/212 (58%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT ++ +GRRI VTV+ C V+ ++++K+GY A+QVG + Sbjct: 1 MNKGLIGKKLGMTQIFAEDGRRIAVTVVEAGPCVVLQKKSVEKDGYTAIQVGYVQKDAAR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + G S E R+ + D +G V F G LVDVTG +IGKGF Sbjct: 61 ANAAQVGHCKSAGAGVFTHYRELRMD-NTDAYNLGDVIEAGVFAEGDLVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR F G R++HG S HR+ GS GC P RVFKNKKM G++G +VTV+ L+VV Sbjct: 120 AGVIKRWGFKGGRSSHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQLGNEKVTVQRLKVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD LIL+ G +PG+ N +L++DS K+ Sbjct: 179 RVDAADNLILLGGAIPGS-ANGVVLIKDSVKA 209 >gi|126657988|ref|ZP_01729140.1| 50S ribosomal protein L3 [Cyanothece sp. CCY0110] gi|126620626|gb|EAZ91343.1| 50S ribosomal protein L3 [Cyanothece sp. CCY0110] Length = 212 Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 84/198 (42%), Positives = 116/198 (58%), Gaps = 3/198 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT ++ E G IPVTV+ C + +T + +GY A+Q+G E + K Sbjct: 1 MAVGLLGTKLGMTQIFEEESGLAIPVTVVQAGPCTITQIKTAETDGYTAIQIGYLEVREK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 N++KP G SP + L E+RV+ D +G F G LVD+ G ++G+G Sbjct: 61 NLTKPELGHLKKAEASPLRHLKEYRVE-DTASYTLGEAVKADIFNAGDLVDIAGTSMGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G KRHNF THG S +HR GSTG PGRV+ KKMAG+ G T ++LEV Sbjct: 120 FAGYQKRHNFKRGSMTHG-SKNHRLPGSTGAGTTPGRVYPGKKMAGQYGAVTTTTRHLEV 178 Query: 180 VSVDDKRGLILVKGCVPG 197 V VD +R L+L++G VPG Sbjct: 179 VKVDAERNLLLIRGAVPG 196 >gi|302344356|ref|YP_003808885.1| 50S ribosomal protein L3 [Desulfarculus baarsii DSM 2075] gi|301640969|gb|ADK86291.1| 50S ribosomal protein L3 [Desulfarculus baarsii DSM 2075] Length = 207 Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 86/197 (43%), Positives = 119/197 (60%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ EGR + VTVL + C VV +T D + Y A+Q+G G K KN Sbjct: 1 MLKGLIGKKVGMTRLFLEEGRAVAVTVLEVGPCHVVQIKTEDNDQYNALQLGFGAKKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP G F V L EFRV+ D VG + F +G V+VTG + G+GF Sbjct: 61 VNKPTAGHFKKAGVEATSTLREFRVEDVAD-FEVGQTITADMFKMGDSVNVTGRSKGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG +KRHNFGG R THG + +H + GS G DP RVFK ++ G G R V+NL++V Sbjct: 120 SGVVKRHNFGGGRDTHGCT-THDAPGSIGQSADPSRVFKGVRLPGHYGAERKQVRNLKIV 178 Query: 181 SVDDKRGLILVKGCVPG 197 V ++ L++V+G VPG Sbjct: 179 DVRPEQNLVVVRGAVPG 195 >gi|225621028|ref|YP_002722286.1| 50S ribosomal protein L3 [Brachyspira hyodysenteriae WA1] gi|254803657|sp|C0QVZ6|RL3_BRAHW RecName: Full=50S ribosomal protein L3 gi|225215848|gb|ACN84582.1| 50S ribosomal protein L3 [Brachyspira hyodysenteriae WA1] Length = 217 Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 86/217 (39%), Positives = 124/217 (57%), Gaps = 7/217 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT V++ G I VTV+ C V+ R +K+GY A+Q+G G K K++ K Sbjct: 3 GIIGKKLGMTTVFDETGNAIAVTVVEAGPCTVMQIRDNEKDGYSAIQLGYGAVKEKHLKK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F N+ PKK L EFR+ D VG F G +DV+ ++ G+GF+G Sbjct: 63 PQIGQFKKANLEPKKYLKEFRMD-DASSYTVGQELKADIFQAGDFIDVSSLSKGRGFAGV 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHN+ G +HG + R+ GS GC P RV+K K M G MG T++NL+VV + Sbjct: 122 MKRHNYDGGPMSHGSNFRRRA-GSIGCNSYPARVWKGKGMPGHMGNTLTTIQNLKVVEIR 180 Query: 184 DKRGLILVKGCVPGA-----KKNSWILVRDSFKSAVN 215 LI++KG +PGA K S + R+ K+++N Sbjct: 181 PDDNLIMIKGAIPGAINSIVKLTSAVKKRNKKKNSMN 217 >gi|150392160|ref|YP_001322209.1| ribosomal protein L3 [Alkaliphilus metalliredigens QYMF] gi|189042829|sp|A6TWI2|RL3_ALKMQ RecName: Full=50S ribosomal protein L3 gi|149952022|gb|ABR50550.1| ribosomal protein L3 [Alkaliphilus metalliredigens QYMF] Length = 210 Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 85/202 (42%), Positives = 118/202 (58%), Gaps = 2/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT ++N +G PVTV+ + V ++ + +GY +VQVG GE K+KN K Sbjct: 3 GLMGRKVGMTQIFNEDGIVTPVTVIEVAENVVTQIKSDETDGYNSVQVGYGEKKIKNTIK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F +PK+ + EFRV + G F G VDVTG++ GKGF G Sbjct: 63 PLQGHFEKAGTTPKRTMKEFRVDSTEGFT-AGQELKADLFQAGDKVDVTGISKGKGFQGV 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KRH HG S HR GS G PGRVFK K + G MG +VT +NLE+V VD Sbjct: 122 IKRHGQSRGPMAHG-SRYHRRPGSMGASAYPGRVFKGKNLPGHMGNVQVTAQNLEIVRVD 180 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 ++ L+L+KG VPG KK ++ Sbjct: 181 LEKNLLLIKGAVPGPKKGVLVI 202 >gi|203284388|ref|YP_002222128.1| 50S ribosomal protein L3 [Borrelia duttonii Ly] gi|203287922|ref|YP_002222937.1| 50S ribosomal protein L3 [Borrelia recurrentis A1] gi|226725137|sp|B5RM36|RL3_BORDL RecName: Full=50S ribosomal protein L3 gi|226725139|sp|B5RPI2|RL3_BORRA RecName: Full=50S ribosomal protein L3 gi|201083831|gb|ACH93422.1| 50S ribosomal protein L3 [Borrelia duttonii Ly] gi|201085142|gb|ACH94716.1| 50S ribosomal protein L3 [Borrelia recurrentis A1] Length = 209 Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 87/212 (41%), Positives = 132/212 (62%), Gaps = 6/212 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V+ G +PVTV+ + V+ +T++++GY A+ +G+ + K VS+ Sbjct: 3 GLIGKKVGMTQVFQSNGIVVPVTVIEFEPNYVIGKKTMERDGYDALIMGSVDLKGSKVSR 62 Query: 64 PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + + N+ PK+ + EF+ K D G F + VD+TG T GKGF G Sbjct: 63 PIKGQYKKLENIEPKRYVIEFKGLKGYD---AGDEVGLDAFREIKYVDITGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRMGG + T++NLE+V + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGEQQTIQNLEIVFI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D+++ ILVKG VPG K S+++V+ + K + Sbjct: 179 DEEKRAILVKGAVPGV-KGSFVIVKKAKKVGI 209 >gi|253580619|ref|ZP_04857883.1| 50S ribosomal protein L3 [Ruminococcus sp. 5_1_39B_FAA] gi|251847990|gb|EES75956.1| 50S ribosomal protein L3 [Ruminococcus sp. 5_1_39BFAA] Length = 210 Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 124/212 (58%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G+ IPVTVL C V +T + +GY AVQVG G+ + Sbjct: 1 MKKAILATKVGMTQIFNEDGQLIPVTVLQAGPCVVTQVKTEENDGYEAVQVGFGDIRESL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G F V+ K+ + EFR + VG F G +D T ++ GKGF Sbjct: 61 VNKPEKGHFDKAGVAVKRFVKEFRFDNAAEYT-VGQEIKADIFADGDHIDATAVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G DP +VFK K M G MG +VTV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKHMPGHMGNVQVTVQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + L+LVKG VPG KK S + ++++ KS Sbjct: 179 RVDTENNLLLVKGAVPGPKK-SLVTIKETVKS 209 >gi|163783906|ref|ZP_02178880.1| ribosomal protein L03 [Hydrogenivirga sp. 128-5-R1-1] gi|159880827|gb|EDP74357.1| ribosomal protein L03 [Hydrogenivirga sp. 128-5-R1-1] Length = 230 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M +G++ +K+GMT ++ G+ IPVTV+ ++ +V RT +K+GY AV +G GE K K Sbjct: 1 MPTGIIGKKIGMTRIFK-NGKAIPVTVIQVEPNYIVGIRTKEKDGYSAVILGTGEKKEKR 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 KP+ F + P + L EF +++ + V F G LVDV G + G+GF Sbjct: 60 TPKPLLKIFEKAGLKPLRVLKEFPLKEGEQPEVGKEVKVEEVFQPGDLVDVAGKSKGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 + AMKR +FGG R +HG S HR+ GS G +P RVFK K+MAG G RV+V LEVV Sbjct: 120 TSAMKRWDFGGFRKSHG-SRYHRAVGSVGAATEPSRVFKGKRMAGHYGNERVSVLGLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 + ++ +ILVKG VPGA K S++ ++ S Sbjct: 179 DIIPEKSVILVKGSVPGATK-SYVELKAS 206 >gi|123966973|ref|YP_001012054.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9515] gi|166233178|sp|A2BYT6|RL3_PROM5 RecName: Full=50S ribosomal protein L3 gi|123201339|gb|ABM72947.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9515] Length = 217 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 83/207 (40%), Positives = 130/207 (62%), Gaps = 3/207 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +G +PVT++ C+V +T +GY A+Q+G G +K K+ Sbjct: 1 MSIGILGKKLGMSQLFDDDGNAVPVTLIEAGPCRVTQLKTQSLDGYTAIQIGYGVSKDKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SKP +G K L EF+V+++ +G + + F VGQ VD++G ++G+GF Sbjct: 61 LSKPEKGHLLKSGKELLKHLKEFKVEENSSY-EIGKEITVTNFEVGQKVDISGKSMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRH F +HG S +HR+ GSTG PGR++ K+MAGR GG ++T K L VV Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKKITTKGLLVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207 +DD++ L++VKG VPG K S + +R Sbjct: 179 KIDDQKNLLVVKGSVPG-KPGSIVNIR 204 >gi|288904273|ref|YP_003429494.1| ribosomal protein L3 [Streptococcus gallolyticus UCN34] gi|306830302|ref|ZP_07463473.1| 50S ribosomal protein L3 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|320548055|ref|ZP_08042335.1| 50S ribosomal protein L3 [Streptococcus equinus ATCC 9812] gi|325977252|ref|YP_004286968.1| 50S ribosomal protein L3 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288730998|emb|CBI12542.1| ribosomal protein L3 [Streptococcus gallolyticus UCN34] gi|304427549|gb|EFM30650.1| 50S ribosomal protein L3 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|320447297|gb|EFW88060.1| 50S ribosomal protein L3 [Streptococcus equinus ATCC 9812] gi|325177180|emb|CBZ47224.1| 50S ribosomal protein L3 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 208 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 93/213 (43%), Positives = 130/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGQEITVDTFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLEVV Sbjct: 118 QGVIKRHGQARGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207 >gi|16077184|ref|NP_387997.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. subtilis str. 168] gi|221307928|ref|ZP_03589775.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. subtilis str. 168] gi|221312249|ref|ZP_03594054.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317183|ref|ZP_03598477.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. subtilis str. JH642] gi|221321446|ref|ZP_03602740.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. subtilis str. SMY] gi|321313787|ref|YP_004206074.1| 50S ribosomal protein L3 [Bacillus subtilis BSn5] gi|1710556|sp|P42920|RL3_BACSU RecName: Full=50S ribosomal protein L3; Short=BL3 gi|1165303|gb|AAC45956.1| L3 [Bacillus subtilis] gi|2632383|emb|CAB11892.1| ribosomal protein L3 (BL3) [Bacillus subtilis subsp. subtilis str. 168] gi|291482489|dbj|BAI83564.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. natto BEST195] gi|320020061|gb|ADV95047.1| 50S ribosomal protein L3 [Bacillus subtilis BSn5] Length = 209 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 92/212 (43%), Positives = 129/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQLGFDDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +PK+ + E R + D VG F+ G++VDVTG++ GKGF Sbjct: 61 SNKPEKGHVAKAETAPKRFVKELR-GVEMDAYEVGQEVKVEIFSAGEIVDVTGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH +HG S HR GS G DP RVFK K + GRMGG ++TV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGP-VDPNRVFKGKLLPGRMGGEQITVQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGAKK S I V+ + KS Sbjct: 178 KVDAERNLLLIKGNVPGAKK-SLITVKSAVKS 208 >gi|52078609|ref|YP_077400.1| 50S ribosomal protein L3 [Bacillus licheniformis ATCC 14580] gi|52783971|ref|YP_089800.1| 50S ribosomal protein L3 [Bacillus licheniformis ATCC 14580] gi|319649116|ref|ZP_08003324.1| 50S ribosomal protein L3 [Bacillus sp. BT1B_CT2] gi|81825438|sp|Q65PA7|RL3_BACLD RecName: Full=50S ribosomal protein L3 gi|52001820|gb|AAU21762.1| ribosomal protein L3 (BL3) [Bacillus licheniformis ATCC 14580] gi|52346473|gb|AAU39107.1| RplC [Bacillus licheniformis ATCC 14580] gi|317388816|gb|EFV69635.1| 50S ribosomal protein L3 [Bacillus sp. BT1B_CT2] Length = 209 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 93/212 (43%), Positives = 128/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTSENDGYEAIQIGFDDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +PK+ + E R D D VG F+ G++VDVTG + GKGF Sbjct: 61 ANKPEKGHVAKAETAPKRFVKELR-GVDMDAYEVGQEVKVDIFSNGEIVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH +HG S HR GS G DP RVFK K + GRMGG ++TV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGP-VDPNRVFKGKLLPGRMGGEQITVQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGAKK S + V+ + KS Sbjct: 178 KVDAERNLLLVKGNVPGAKK-SLVTVKSAVKS 208 >gi|297588191|ref|ZP_06946835.1| 50S ribosomal protein L3 [Finegoldia magna ATCC 53516] gi|297574880|gb|EFH93600.1| 50S ribosomal protein L3 [Finegoldia magna ATCC 53516] Length = 209 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 89/208 (42%), Positives = 128/208 (61%), Gaps = 3/208 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT ++N +G +PVTV+ V +T +K GY A+QVG E K K+V++P Sbjct: 4 ILGKKIGMTQIFNEDGSVVPVTVIEAGPMVVTQIKTKEKEGYNAIQVGYIEKKEKHVNQP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 MRG F VS KK L EF++ DD +G F G +VDV G++ GKG G++ Sbjct: 64 MRGHFGKAGVSFKKHLQEFKI-GDDQQFNLGDEIKLDIFQDGDVVDVIGISKGKGTQGSI 122 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 RHN+ HG S SHR G+ P RVFK +K +G+MG +RVTV+NL++V VD+ Sbjct: 123 VRHNYSRGPMGHG-SKSHRVAGARSAGSYPARVFKGRKGSGKMGHDRVTVQNLKIVKVDN 181 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPG K + VR++ KS Sbjct: 182 ERNLLLIKGAVPG-NKGGVVTVREAIKS 208 >gi|306832547|ref|ZP_07465687.1| 50S ribosomal protein L3 [Streptococcus bovis ATCC 700338] gi|304425305|gb|EFM28431.1| 50S ribosomal protein L3 [Streptococcus bovis ATCC 700338] Length = 208 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG + + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGQEITVNTFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLEVV Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207 >gi|207723095|ref|YP_002253500.1| 50s ribosomal protein l3 [Ralstonia solanacearum IPO1609] gi|206588288|emb|CAQ18986.1| 50s ribosomal protein l3 [Ralstonia solanacearum IPO1609] Length = 209 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 87/202 (43%), Positives = 120/202 (59%), Gaps = 2/202 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V+ +G IPVTVL + +V +T + +GY AVQV G + V+KP+ G + Sbjct: 1 MTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGSRRASRVTKPLAGHLAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130 V + + EFR+ L +G F+ GQ +DV G TIGKG++G +KR+NF Sbjct: 61 AGVEAGEIIAEFRIDAAKAAELKLGDTIDVDLFSAGQKIDVQGTTIGKGYAGTIKRYNFS 120 Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190 RA+HG S SH GS G QDPGRVF K+M G MG TV+NL +V VD +R L+L Sbjct: 121 SGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVIVRVDAERKLLL 180 Query: 191 VKGCVPGAKKNSWILVRDSFKS 212 VKG VPGA K+ +++V + K+ Sbjct: 181 VKGAVPGA-KSGFVVVSPAVKA 201 >gi|329956703|ref|ZP_08297276.1| 50S ribosomal protein L3 [Bacteroides clarus YIT 12056] gi|328524075|gb|EGF51151.1| 50S ribosomal protein L3 [Bacteroides clarus YIT 12056] Length = 205 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 84/205 (40%), Positives = 126/205 (61%), Gaps = 3/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EG+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYQAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PKK L EF+ + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFEGVDFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + L+L+KG VPG K + I+ + Sbjct: 181 IAEHNLLLIKGSVPGCKGSIVIIEK 205 >gi|237717399|ref|ZP_04547880.1| 50S ribosomal protein L3 [Bacteroides sp. D1] gi|262406164|ref|ZP_06082714.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_22] gi|294644059|ref|ZP_06721836.1| 50S ribosomal protein L3 [Bacteroides ovatus SD CC 2a] gi|294807315|ref|ZP_06766128.1| 50S ribosomal protein L3 [Bacteroides xylanisolvens SD CC 1b] gi|298483064|ref|ZP_07001245.1| 50S ribosomal protein L3 [Bacteroides sp. D22] gi|229443382|gb|EEO49173.1| 50S ribosomal protein L3 [Bacteroides sp. D1] gi|262357039|gb|EEZ06129.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_22] gi|292640583|gb|EFF58824.1| 50S ribosomal protein L3 [Bacteroides ovatus SD CC 2a] gi|294445480|gb|EFG14134.1| 50S ribosomal protein L3 [Bacteroides xylanisolvens SD CC 1b] gi|295085428|emb|CBK66951.1| LSU ribosomal protein L3P [Bacteroides xylanisolvens XB1A] gi|298270808|gb|EFI12388.1| 50S ribosomal protein L3 [Bacteroides sp. D22] Length = 205 Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 84/205 (40%), Positives = 126/205 (61%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PK+ L EF+ + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKRAGVTPKRHLAEFKEFETE--LNLGDTITVEMFNDASFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ +ATHG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 L+LVKG +PG K S +L+ Sbjct: 181 IADHNLLLVKGSIPGC-KGSIVLIE 204 >gi|218779762|ref|YP_002431080.1| 50S ribosomal protein L3 [Desulfatibacillum alkenivorans AK-01] gi|226725162|sp|B8FET5|RL3_DESAA RecName: Full=50S ribosomal protein L3 gi|218761146|gb|ACL03612.1| ribosomal protein L3 [Desulfatibacillum alkenivorans AK-01] Length = 211 Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 87/210 (41%), Positives = 121/210 (57%), Gaps = 2/210 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT +++ +GR IPVTV+ C V +T DK+GY A+Q+G G K ++ Sbjct: 1 MSKGILGKKLGMTGLFSSDGRHIPVTVIEAGPCVVTQIKTKDKDGYNALQLGFGPKKERH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G F + + EF V ++ +G S F VG+ +DV G++ G+GF Sbjct: 61 TNKPETGHFEKSGGAAYVMVKEFAVDNPEE-FELGQSLSTELFAVGEKIDVAGVSKGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRH FGG R THG R GS GC P +V K KK+ G G R TV+NLE+V Sbjct: 120 AGVMKRHGFGGGRMTHGGRCKRRP-GSIGCSAWPSKVIKGKKLPGHYGVERKTVRNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 + + LIL+KG VPGAK L + F Sbjct: 179 DIRADQNLILLKGAVPGAKSGMLELKKLKF 208 >gi|313889584|ref|ZP_07823229.1| 50S ribosomal protein L3 [Streptococcus pseudoporcinus SPIN 20026] gi|313122093|gb|EFR45187.1| 50S ribosomal protein L3 [Streptococcus pseudoporcinus SPIN 20026] Length = 208 Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 92/213 (43%), Positives = 131/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207 >gi|88807884|ref|ZP_01123395.1| 50S ribosomal protein L3 [Synechococcus sp. WH 7805] gi|88787923|gb|EAR19079.1| 50S ribosomal protein L3 [Synechococcus sp. WH 7805] Length = 218 Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 83/209 (39%), Positives = 127/209 (60%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +G+ +PVT++ C++ +T + +GY AVQ+G GE + K Sbjct: 1 MSIGILGKKLGMSQLFDEQGKAVPVTLIEAGPCRITQLKTTETDGYSAVQIGFGETRDKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G + + L E+RV D D L +G + F GQ VDV+G T+G+GF Sbjct: 61 VNKPAKGHLAKSGEGVLRHLSEYRVD-DVDGLELGGAVTVGDFEAGQKVDVSGDTMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F THG S +HR GSTG PGR++ K+MAGR GG + T + L ++ Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKTTTRGLTIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VD R L++VKG VPG K + + +R + Sbjct: 179 RVDSDRNLLVVKGSVPG-KPGALLNIRPA 206 >gi|291298710|ref|YP_003509988.1| 50S ribosomal protein L3 [Stackebrandtia nassauensis DSM 44728] gi|290567930|gb|ADD40895.1| ribosomal protein L3 [Stackebrandtia nassauensis DSM 44728] Length = 220 Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 96/211 (45%), Positives = 127/211 (60%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 +G++ KLGMT V++ R +PVTV+ C V RT D +GY AVQ+ G+ + V+ Sbjct: 6 NGILGTKLGMTQVWDENNRVVPVTVVQAGPCVVTQVRTPDTDGYSAVQLAFGQIDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ V+P++ + E R D G + F G LVDVTG T GKG++G Sbjct: 66 KPLSGHFAKAEVAPRRHVVELRTT-DATEYSAGDEITVDRFETGGLVDVTGKTKGKGYAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGGL A HGV HRS GS G PGRVFK +MAGRMGG R TV+NL++ +V Sbjct: 125 VMKRHGFGGLGAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGGVRHTVQNLKIHAV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D L+L+KG +PG +LVR + K A Sbjct: 185 DADNNLLLIKGALPGP-TGGLVLVRGAVKVA 214 >gi|172038926|ref|YP_001805427.1| 50S ribosomal protein L3 [Cyanothece sp. ATCC 51142] gi|254803668|sp|B1WQQ9|RL3_CYAA5 RecName: Full=50S ribosomal protein L3 gi|171700380|gb|ACB53361.1| 50S ribosomal protein L3 [Cyanothece sp. ATCC 51142] Length = 212 Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 85/198 (42%), Positives = 116/198 (58%), Gaps = 3/198 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT ++ E G IPVTV+ C + +T + +GY A+Q+G E K K Sbjct: 1 MAVGLLGTKLGMTQIFEEESGLAIPVTVVQAGPCTITQIKTAETDGYSAIQIGYLEVKEK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G V SP + L E+RV D +G F G LVD+ G ++G+G Sbjct: 61 ALTKPELGHLKKVEASPLRHLKEYRVD-DTATYTLGEAVKADIFNAGDLVDIAGTSMGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G KRHNF THG S +HR GSTG PGRV+ KKMAG+ G + T ++L+V Sbjct: 120 FAGYQKRHNFKRGSMTHG-SKNHRLPGSTGAGTTPGRVYPGKKMAGQYGAVKTTTRHLQV 178 Query: 180 VSVDDKRGLILVKGCVPG 197 V VD +R L+L+KG VPG Sbjct: 179 VRVDAERNLLLIKGAVPG 196 >gi|157690900|ref|YP_001485362.1| 50S ribosomal protein L3 [Bacillus pumilus SAFR-032] gi|166989380|sp|A8F985|RL3_BACP2 RecName: Full=50S ribosomal protein L3 gi|157679658|gb|ABV60802.1| ribosomal protein L3 [Bacillus pumilus SAFR-032] Length = 209 Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 93/212 (43%), Positives = 126/212 (59%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T D +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVVEAAANVVLQKKTTDTDGYEAIQIGFDDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +PK+ + E R + D VG F G +VDVTG + GKGF Sbjct: 61 SNKPEKGHVAKAETAPKRFVKELR-GAELDAYEVGQEVKVDIFANGDIVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH THG S HR GS G DP RVFK K + GRMGG ++TV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMTHG-SRYHRRPGSMGP-VDPNRVFKGKLLPGRMGGEQITVQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGAKK S + V+ + KS Sbjct: 178 KVDAERNLLLIKGNVPGAKK-SLVTVKSAVKS 208 >gi|195977208|ref|YP_002122452.1| 50S ribosomal protein L3 [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225867665|ref|YP_002743613.1| 50S ribosomal protein L3 [Streptococcus equi subsp. zooepidemicus] gi|226730570|sp|B4U500|RL3_STREM RecName: Full=50S ribosomal protein L3 gi|259709735|sp|C0MCB0|RL3_STRS7 RecName: Full=50S ribosomal protein L3 gi|195973913|gb|ACG61439.1| 50S ribosomal protein L3 [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225700941|emb|CAW97644.1| 50S ribosomal protein L3 [Streptococcus equi subsp. zooepidemicus] Length = 208 Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 91/213 (42%), Positives = 131/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAIQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDIFAAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207 >gi|325000492|ref|ZP_08121604.1| ribosomal protein L3 [Pseudonocardia sp. P1] Length = 225 Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 88/197 (44%), Positives = 121/197 (61%), Gaps = 1/197 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 +GV+ KLGMT V++ R +PVTV+ + V R+ + +GY AVQ+ G + V+ Sbjct: 15 TGVLGTKLGMTQVFDDNNRVVPVTVVQVGPNVVTQVRSEESDGYTAVQLAYGAIDPRKVN 74 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V+P++ L E R D P + + ++ + + VDV G+T GKGF+G Sbjct: 75 KPETGHFAKAGVTPRRHLLELRTADAADYTPGQEITAEAFAEIAE-VDVVGVTKGKGFAG 133 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F GL A+HG HRS GS G PGRVFK +MAGRMG R T +NL+V V Sbjct: 134 VMKRHGFAGLGASHGTQRKHRSPGSIGGCATPGRVFKGVRMAGRMGSERQTTQNLKVHRV 193 Query: 183 DDKRGLILVKGCVPGAK 199 D +RGL+L+KG VPGA+ Sbjct: 194 DAERGLLLIKGAVPGAR 210 >gi|225869536|ref|YP_002745483.1| 50S ribosomal protein L3 [Streptococcus equi subsp. equi 4047] gi|254803692|sp|C0M660|RL3_STRE4 RecName: Full=50S ribosomal protein L3 gi|225698940|emb|CAW91967.1| 50S ribosomal protein L3 [Streptococcus equi subsp. equi 4047] Length = 208 Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 91/213 (42%), Positives = 130/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + + Sbjct: 1 MTKGILGEKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAIQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDIFAAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGP-VSPNRVFKNKHLAGRMGGNRVTIQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207 >gi|150008984|ref|YP_001303727.1| 50S ribosomal protein L3 [Parabacteroides distasonis ATCC 8503] gi|255014815|ref|ZP_05286941.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_7] gi|256841015|ref|ZP_05546522.1| 50S ribosomal protein L3 [Parabacteroides sp. D13] gi|262383874|ref|ZP_06077010.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_33B] gi|298375783|ref|ZP_06985739.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_19] gi|301312033|ref|ZP_07217955.1| 50S ribosomal protein L3 [Bacteroides sp. 20_3] gi|166233171|sp|A6LEJ1|RL3_PARD8 RecName: Full=50S ribosomal protein L3 gi|149937408|gb|ABR44105.1| ribosomal protein L3 [Parabacteroides distasonis ATCC 8503] gi|256736858|gb|EEU50185.1| 50S ribosomal protein L3 [Parabacteroides sp. D13] gi|262294772|gb|EEY82704.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_33B] gi|298266820|gb|EFI08477.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_19] gi|300830135|gb|EFK60783.1| 50S ribosomal protein L3 [Bacteroides sp. 20_3] Length = 205 Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 86/205 (41%), Positives = 125/205 (60%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EG+ +P TV+ + C V +TL+K+GY AVQ+G E K K+ ++ Sbjct: 3 GLLGKKIGMTSVFSAEGKNLPCTVIEVGPCVVTQIKTLEKDGYEAVQLGFQEKKEKHTTQ 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ L EF+ + + L G V + + VDV G + GKGF G Sbjct: 63 PEMGHFKKAGVAPQRHLAEFKNFETEYKL--GDVITVDFLEDAGFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ + THG R GS G P +VFK +M G+MG RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGNERVTVQNLQVIKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + L+LVKG VPGA K S +L+ Sbjct: 181 MPEHNLLLVKGSVPGA-KGSILLIE 204 >gi|148238770|ref|YP_001224157.1| 50S ribosomal protein L3 [Synechococcus sp. WH 7803] gi|166234602|sp|A5GIU5|RL3_SYNPW RecName: Full=50S ribosomal protein L3 gi|147847309|emb|CAK22860.1| 50S ribosomal protein L3 [Synechococcus sp. WH 7803] Length = 218 Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 83/209 (39%), Positives = 128/209 (61%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +G+ +PVT++ C++ +T + +GY AVQ+G GE + K Sbjct: 1 MSIGILGKKLGMSQLFDEQGKAVPVTLIEAGPCRITQLKTTETDGYSAVQIGFGETRDKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G + + L E+RV D + L +G + S F GQ VDV+G T+G+GF Sbjct: 61 VNKPAKGHLAKSGEGVLRHLSEYRVD-DVNGLELGGAVTVSDFEAGQKVDVSGDTMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F THG S +HR GSTG PGR++ K+MAGR GG + T + L ++ Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKTTTRGLTIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VD R L++VKG VPG K + + +R + Sbjct: 179 KVDSDRNLLVVKGSVPG-KPGALLNIRPA 206 >gi|308172007|ref|YP_003918712.1| 50S ribosomal protein L3 (BL3) [Bacillus amyloliquefaciens DSM 7] gi|307604871|emb|CBI41242.1| ribosomal protein L3 (BL3) [Bacillus amyloliquefaciens DSM 7] gi|328551817|gb|AEB22309.1| 50S ribosomal protein L3 [Bacillus amyloliquefaciens TA208] gi|328910077|gb|AEB61673.1| ribosomal protein L3 (BL3) [Bacillus amyloliquefaciens LL3] Length = 209 Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 130/212 (61%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQLGFDDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +PK+ + E R D D +G F+ G++VDVTG++ GKGF Sbjct: 61 SNKPEKGHVAKAETAPKRFVKELR-GVDMDAYEIGQEVKVEIFSAGEIVDVTGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH +HG S HR GS G DP RVFK K + GRMGG+++TV+NLEVV Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGP-VDPNRVFKGKLLPGRMGGDQITVQNLEVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA+K + I V+ + KS Sbjct: 178 KVDAERNLLLIKGNVPGARK-ALITVKSAVKS 208 >gi|239618265|ref|YP_002941587.1| ribosomal protein L3 [Kosmotoga olearia TBF 19.5.1] gi|259646550|sp|C5CGR4|RL3_KOSOT RecName: Full=50S ribosomal protein L3 gi|239507096|gb|ACR80583.1| ribosomal protein L3 [Kosmotoga olearia TBF 19.5.1] Length = 213 Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 90/200 (45%), Positives = 120/200 (60%), Gaps = 7/200 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG----AGEAKVK 59 G++ RKLGMT +Y +G+ + VTV+ C VV +T Y A+Q+G + E K Sbjct: 3 GIIGRKLGMTTIYE-DGKALGVTVIKAGPCTVVQKKTAAGGEYNAIQLGFEELSPERAKK 61 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP+ F + V P + L E RV+ D+ VG V F G+LVDVTG T G+G Sbjct: 62 LLTKPILKKFEAAKVKPHRILKEIRVENPDEY-NVGDVIDAGIFKEGELVDVTGWTKGRG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+GAMKR NFGG THG S HR GS G +P +++K KKM GR G RVTV N++V Sbjct: 121 FTGAMKRWNFGGGEVTHG-SKFHRELGSVGNHTEPAKIWKGKKMPGRYGNERVTVLNVKV 179 Query: 180 VSVDDKRGLILVKGCVPGAK 199 V VD + GLI + G VPGA+ Sbjct: 180 VKVDAENGLIAIHGAVPGAR 199 >gi|194017514|ref|ZP_03056125.1| ribosomal protein L3 [Bacillus pumilus ATCC 7061] gi|194010786|gb|EDW20357.1| ribosomal protein L3 [Bacillus pumilus ATCC 7061] Length = 209 Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 93/212 (43%), Positives = 126/212 (59%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T D +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVVEAAANVVLQKKTADTDGYEAIQIGFDDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +PK+ + E R + D VG F G +VDVTG + GKGF Sbjct: 61 SNKPEKGHVAKAETAPKRFVKELR-GAELDAYEVGQEVKVDIFANGDIVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH THG S HR GS G DP RVFK K + GRMGG ++TV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMTHG-SRYHRRPGSMGP-VDPNRVFKGKLLPGRMGGEQITVQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGAKK S + V+ + KS Sbjct: 178 KVDAERNLLLIKGNVPGAKK-SLVTVKSAVKS 208 >gi|227487123|ref|ZP_03917439.1| 50S ribosomal protein L3 [Corynebacterium glucuronolyticum ATCC 51867] gi|227541710|ref|ZP_03971759.1| 50S ribosomal protein L3 [Corynebacterium glucuronolyticum ATCC 51866] gi|227092781|gb|EEI28093.1| 50S ribosomal protein L3 [Corynebacterium glucuronolyticum ATCC 51867] gi|227182525|gb|EEI63497.1| 50S ribosomal protein L3 [Corynebacterium glucuronolyticum ATCC 51866] Length = 216 Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 85/210 (40%), Positives = 121/210 (57%), Gaps = 6/210 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ + R +PVTV+ C V RT++ +GY A+Q+ GE + K Sbjct: 8 GILGTKLGMTQVFDEDNRVVPVTVVEAGPCVVTQIRTVETDGYNAIQIAYGEIDPRKAKK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 P G +P++ + E R+ DD+ +G + F LVDVTG T GKG++ Sbjct: 68 PQVGHAKKAGATPRRHVAEIRM---DDVSGYELGQDVTVDIFEGVNLVDVTGTTKGKGYA 124 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 GAMKRH F G A HG +HR G G PGRVFK +MAGRMG +RVT +NL+V Sbjct: 125 GAMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGQDRVTTQNLKVQR 184 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D + LIL+KG +PG + + V+ + K Sbjct: 185 IDAEANLILIKGAIPG-NRGGLVTVKTAVK 213 >gi|171778375|ref|ZP_02919554.1| hypothetical protein STRINF_00405 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282906|gb|EDT48330.1| hypothetical protein STRINF_00405 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 208 Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 93/213 (43%), Positives = 130/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGQEITVDTFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLEVV Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207 >gi|16329941|ref|NP_440669.1| 50S ribosomal protein L3 [Synechocystis sp. PCC 6803] gi|2500229|sp|P73320|RL3_SYNY3 RecName: Full=50S ribosomal protein L3 gi|1652427|dbj|BAA17349.1| 50S ribosomal protein L3 [Synechocystis sp. PCC 6803] Length = 213 Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 87/198 (43%), Positives = 118/198 (59%), Gaps = 3/198 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT +++ E G IPVTV+ C V +T D +GY A+QVG K K Sbjct: 1 MSIGILGTKLGMTQIFDQESGISIPVTVVQAGPCPVTQVKTQDTDGYNAIQVGFLPVKEK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +SKP G N P + L E+R+ +L P G + F G LVDV G ++G+G Sbjct: 61 ALSKPELGHLKKSNTDPMRHLKEYRLTDAPNLQP-GDAVTADIFQAGDLVDVAGQSMGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G KRHNF THG S +HR GSTG PGRV+ K+MAG+ G ++VTV+ L V Sbjct: 120 FAGYQKRHNFRRGNMTHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGQYGASQVTVRRLTV 178 Query: 180 VSVDDKRGLILVKGCVPG 197 V VD +R L+++KG +PG Sbjct: 179 VRVDAERNLLIIKGALPG 196 >gi|160883064|ref|ZP_02064067.1| hypothetical protein BACOVA_01027 [Bacteroides ovatus ATCC 8483] gi|260175416|ref|ZP_05761828.1| 50S ribosomal protein L3 [Bacteroides sp. D2] gi|299144624|ref|ZP_07037692.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_23] gi|315923646|ref|ZP_07919886.1| 50S ribosomal protein L3 [Bacteroides sp. D2] gi|156111536|gb|EDO13281.1| hypothetical protein BACOVA_01027 [Bacteroides ovatus ATCC 8483] gi|298515115|gb|EFI38996.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_23] gi|313697521|gb|EFS34356.1| 50S ribosomal protein L3 [Bacteroides sp. D2] Length = 205 Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 84/205 (40%), Positives = 125/205 (60%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PK+ L EF+ D L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKRAGVTPKRHLAEFKEFGTD--LNLGDTITVEMFNDANFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ +ATHG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 L+L+KG +PG K S +L+ Sbjct: 181 IADHNLLLIKGSIPGC-KGSIVLIE 204 >gi|154684634|ref|YP_001419795.1| 50S ribosomal protein L3 [Bacillus amyloliquefaciens FZB42] gi|166233116|sp|A7Z0N8|RL3_BACA2 RecName: Full=50S ribosomal protein L3 gi|154350485|gb|ABS72564.1| RplC [Bacillus amyloliquefaciens FZB42] Length = 209 Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 130/212 (61%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQLGFDDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +PK+ + E R D D +G F+ G++VDVTG++ GKGF Sbjct: 61 SNKPEKGHVAKAETAPKRFVKELR-GVDMDAYEIGQEVKVEIFSAGEIVDVTGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH +HG S HR GS G DP RVFK K + GRMGG+++TV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGP-VDPNRVFKGKLLPGRMGGDQITVQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA+K + I V+ + KS Sbjct: 178 KVDAERNLLLIKGNVPGARK-TLITVKSAVKS 208 >gi|217077283|ref|YP_002335001.1| ribosomal protein L3 [Thermosipho africanus TCF52B] gi|226730580|sp|B7IHU6|RL3_THEAB RecName: Full=50S ribosomal protein L3 gi|217037138|gb|ACJ75660.1| ribosomal protein L3 [Thermosipho africanus TCF52B] Length = 205 Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 87/205 (42%), Positives = 122/205 (59%), Gaps = 6/205 (2%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RK+GMT ++ + + IPVTV+ C VV +T+D +GY A+Q+G EAK V+KP Sbjct: 4 IIGRKVGMTRIFK-DDKVIPVTVIKAGPCYVVQKKTIDTDGYNAIQIGFEEAK--KVNKP 60 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M G F V P K L EFRV+ ++ +G F G +D+TG + G+GF+GAM Sbjct: 61 MEGVFKKAGVKPLKILKEFRVENPEEF-ELGQEIKVDIFAEGDKIDITGWSKGRGFAGAM 119 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR F G +HG HR GS G +P R+FK KKM G+ G RVT+ N E+V +D Sbjct: 120 KRWGFRGGPKSHGAKF-HRELGSVGQHSEPARIFKGKKMPGQYGNERVTILNSEIVKIDV 178 Query: 185 KRGLILVKGCVPGAKKNSWILVRDS 209 + LI VKG VPGA + +L+R + Sbjct: 179 ENNLIAVKGGVPGA-RGGLVLIRTA 202 >gi|305665137|ref|YP_003861424.1| 50S ribosomal protein L3 [Maribacter sp. HTCC2170] gi|88709889|gb|EAR02121.1| 50S ribosomal protein L3 [Maribacter sp. HTCC2170] Length = 207 Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 84/206 (40%), Positives = 123/206 (59%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ +P TV+ C V RT + +GY A+Q+G + K + Sbjct: 2 SGLIGKKVGMTSIFDENGKNVPCTVIEAGPCVVTQVRTEEVDGYSALQLGFDDKAEKRAN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F SPKKK+ EF Q + +G F G+ VDV G + GKGF G Sbjct: 62 KAESGHFKKAGASPKKKVVEF--QGFEGEYKLGDTIGVDVFVEGEFVDVVGTSKGKGFQG 119 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH F G+ +ATHG R+ GS G P RVFK +MAGRMGG+R TV+NL V+ Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGDRTTVQNLRVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 + ++ L++VKGCVPG KN+++ ++ Sbjct: 180 IVPEKNLLVVKGCVPG-HKNAYVTIK 204 >gi|288818164|ref|YP_003432512.1| ribosomal protein L3 [Hydrogenobacter thermophilus TK-6] gi|288787564|dbj|BAI69311.1| ribosomal protein L3 [Hydrogenobacter thermophilus TK-6] gi|308751765|gb|ADO45248.1| 50S ribosomal protein L3 [Hydrogenobacter thermophilus TK-6] Length = 235 Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 89/205 (43%), Positives = 130/205 (63%), Gaps = 17/205 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ +G IPVT++ + VV ++++K+GY A+Q+GA AK K+ Sbjct: 1 MAIGLIGKKVGMTRVFLKDGTAIPVTLIEIPPHTVVAIKSIEKDGYSALQLGAYSAKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--------LPVGSVFSPSYFTVGQLVDVT 112 ++KP G V V ++L EFRV DD+ L V VFSP G+LVDV Sbjct: 61 LTKPEMGHLQKVGVRLLRRLKEFRV---DDIAGYQVGQELTVADVFSP-----GELVDVV 112 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ G+GF+G MKR +FGG +HG HR+ GS G R DPGRV+K+K+MAG G +V Sbjct: 113 GISKGRGFTGTMKRWDFGGFPKSHGHRY-HRAVGSIGNRSDPGRVWKSKRMAGHYGAQKV 171 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPG 197 +++L VV + ++ L+LVKG VPG Sbjct: 172 RIQSLFVVDIVPEKNLMLVKGSVPG 196 >gi|283782758|ref|YP_003373512.1| 50S ribosomal protein L3 [Gardnerella vaginalis 409-05] gi|297242968|ref|ZP_06926906.1| ribosomal protein L3 [Gardnerella vaginalis AMD] gi|298253073|ref|ZP_06976865.1| ribosomal protein L3 [Gardnerella vaginalis 5-1] gi|283442144|gb|ADB14610.1| 50S ribosomal protein L3 [Gardnerella vaginalis 409-05] gi|296889179|gb|EFH27913.1| ribosomal protein L3 [Gardnerella vaginalis AMD] gi|297532468|gb|EFH71354.1| ribosomal protein L3 [Gardnerella vaginalis 5-1] Length = 216 Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 85/212 (40%), Positives = 122/212 (57%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+ ++ RKLGM+ V++ G +PVT++ + V +T++ +GY AVQ+G G+ V Sbjct: 7 RTALLGRKLGMSQVWDENGFFVPVTLVEVATNVVTAVKTVESDGYCAVQLGYGQIDPTKV 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G F+ V+P++ L E R + D P G + F G VDVTG T GKGF+ Sbjct: 67 TKPLAGHFAKAGVTPRRHLAEVRTENAADYQP-GQELTAELFAEGSEVDVTGTTKGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F R THG + R GS G P R+ K K+MAGRMG T NL +VS Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTSTALNLTIVS 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + G++ +KG VPG K + +LVR + K A Sbjct: 186 SDVENGILAIKGAVPG-PKGAIVLVRSAVKGA 216 >gi|295401920|ref|ZP_06811883.1| 50S ribosomal protein L3 [Geobacillus thermoglucosidasius C56-YS93] gi|312109261|ref|YP_003987577.1| 50S ribosomal protein L3 [Geobacillus sp. Y4.1MC1] gi|294976050|gb|EFG51665.1| 50S ribosomal protein L3 [Geobacillus thermoglucosidasius C56-YS93] gi|311214362|gb|ADP72966.1| 50S ribosomal protein L3 [Geobacillus sp. Y4.1MC1] Length = 211 Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 93/219 (42%), Positives = 129/219 (58%), Gaps = 8/219 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T++K+GY A+Q+G + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTIEKDGYEAIQLGFEDLSEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G + N +PK+ + E R D+ VG F+ G +VDVTG++ GKGF Sbjct: 61 ANKPQIGHAAKANTAPKRFIREIRGANIDEY-EVGQEVKVDIFSEGDIVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G P RVFK+K++ GRMGG RVT++NL++V Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGAIA-PNRVFKSKELPGRMGGQRVTIQNLKIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 VD +R L+L+KG VPG +K I+ KSAV K K Sbjct: 178 KVDPERNLLLIKGNVPGPRKGLVIV-----KSAVKAKAK 211 >gi|29374851|ref|NP_814004.1| 50S ribosomal protein L3 [Enterococcus faecalis V583] gi|227519992|ref|ZP_03950041.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0104] gi|227555853|ref|ZP_03985900.1| 50S ribosomal protein L3 [Enterococcus faecalis HH22] gi|229546964|ref|ZP_04435689.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1322] gi|229550553|ref|ZP_04439278.1| 50S ribosomal protein L3 [Enterococcus faecalis ATCC 29200] gi|255971709|ref|ZP_05422295.1| 50S ribosomal protein L3 [Enterococcus faecalis T1] gi|255974709|ref|ZP_05425295.1| 50S ribosomal protein L3 [Enterococcus faecalis T2] gi|256618380|ref|ZP_05475226.1| 50S ribosomal protein L3 [Enterococcus faecalis ATCC 4200] gi|256762003|ref|ZP_05502583.1| 50S ribosomal protein L3 [Enterococcus faecalis T3] gi|256855163|ref|ZP_05560524.1| ribosomal protein L3 [Enterococcus faecalis T8] gi|256956862|ref|ZP_05561033.1| 50S ribosomal protein L3 [Enterococcus faecalis DS5] gi|256960669|ref|ZP_05564840.1| 50S ribosomal protein L3 [Enterococcus faecalis Merz96] gi|256964132|ref|ZP_05568303.1| 50S ribosomal protein L3 [Enterococcus faecalis HIP11704] gi|257078532|ref|ZP_05572893.1| 50S ribosomal protein L3 [Enterococcus faecalis JH1] gi|257081497|ref|ZP_05575858.1| 50S ribosomal protein L3 [Enterococcus faecalis E1Sol] gi|257084145|ref|ZP_05578506.1| 50S ribosomal protein L3 [Enterococcus faecalis Fly1] gi|257087972|ref|ZP_05582333.1| 50S ribosomal protein L3 [Enterococcus faecalis D6] gi|257088649|ref|ZP_05583010.1| 50S ribosomal protein L3 [Enterococcus faecalis CH188] gi|257417576|ref|ZP_05594570.1| 50S ribosomal protein L3 [Enterococcus faecalis AR01/DG] gi|257418699|ref|ZP_05595693.1| 50S ribosomal protein L3 [Enterococcus faecalis T11] gi|257421500|ref|ZP_05598490.1| 50S ribosomal protein L3 [Enterococcus faecalis X98] gi|293382758|ref|ZP_06628683.1| 50S ribosomal protein L3 [Enterococcus faecalis R712] gi|293388059|ref|ZP_06632587.1| 50S ribosomal protein L3 [Enterococcus faecalis S613] gi|294781051|ref|ZP_06746402.1| 50S ribosomal protein L3 [Enterococcus faecalis PC1.1] gi|300862213|ref|ZP_07108293.1| 50S ribosomal protein L3 [Enterococcus faecalis TUSoD Ef11] gi|307269087|ref|ZP_07550448.1| 50S ribosomal protein L3 [Enterococcus faecalis TX4248] gi|307274171|ref|ZP_07555379.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0855] gi|307276396|ref|ZP_07557519.1| 50S ribosomal protein L3 [Enterococcus faecalis TX2134] gi|307278606|ref|ZP_07559676.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0860] gi|307287014|ref|ZP_07567089.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0109] gi|307291645|ref|ZP_07571520.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0411] gi|312901122|ref|ZP_07760410.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0470] gi|312904684|ref|ZP_07763839.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0635] gi|312908653|ref|ZP_07767595.1| 50S ribosomal protein L3 [Enterococcus faecalis DAPTO 512] gi|312909199|ref|ZP_07768056.1| 50S ribosomal protein L3 [Enterococcus faecalis DAPTO 516] gi|312952607|ref|ZP_07771471.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0102] gi|42559615|sp|Q839G4|RL3_ENTFA RecName: Full=50S ribosomal protein L3 gi|29342309|gb|AAO80075.1| ribosomal protein L3 [Enterococcus faecalis V583] gi|227072540|gb|EEI10503.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0104] gi|227175020|gb|EEI55992.1| 50S ribosomal protein L3 [Enterococcus faecalis HH22] gi|229304272|gb|EEN70268.1| 50S ribosomal protein L3 [Enterococcus faecalis ATCC 29200] gi|229307892|gb|EEN73879.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1322] gi|255962727|gb|EET95203.1| 50S ribosomal protein L3 [Enterococcus faecalis T1] gi|255967581|gb|EET98203.1| 50S ribosomal protein L3 [Enterococcus faecalis T2] gi|256597907|gb|EEU17083.1| 50S ribosomal protein L3 [Enterococcus faecalis ATCC 4200] gi|256683254|gb|EEU22949.1| 50S ribosomal protein L3 [Enterococcus faecalis T3] gi|256709676|gb|EEU24723.1| ribosomal protein L3 [Enterococcus faecalis T8] gi|256947358|gb|EEU63990.1| 50S ribosomal protein L3 [Enterococcus faecalis DS5] gi|256951165|gb|EEU67797.1| 50S ribosomal protein L3 [Enterococcus faecalis Merz96] gi|256954628|gb|EEU71260.1| 50S ribosomal protein L3 [Enterococcus faecalis HIP11704] gi|256986562|gb|EEU73864.1| 50S ribosomal protein L3 [Enterococcus faecalis JH1] gi|256989527|gb|EEU76829.1| 50S ribosomal protein L3 [Enterococcus faecalis E1Sol] gi|256992175|gb|EEU79477.1| 50S ribosomal protein L3 [Enterococcus faecalis Fly1] gi|256996002|gb|EEU83304.1| 50S ribosomal protein L3 [Enterococcus faecalis D6] gi|256997461|gb|EEU83981.1| 50S ribosomal protein L3 [Enterococcus faecalis CH188] gi|257159404|gb|EEU89364.1| 50S ribosomal protein L3 [Enterococcus faecalis ARO1/DG] gi|257160527|gb|EEU90487.1| 50S ribosomal protein L3 [Enterococcus faecalis T11] gi|257163324|gb|EEU93284.1| 50S ribosomal protein L3 [Enterococcus faecalis X98] gi|291079918|gb|EFE17282.1| 50S ribosomal protein L3 [Enterococcus faecalis R712] gi|291082510|gb|EFE19473.1| 50S ribosomal protein L3 [Enterococcus faecalis S613] gi|294451854|gb|EFG20305.1| 50S ribosomal protein L3 [Enterococcus faecalis PC1.1] gi|295112506|emb|CBL31143.1| LSU ribosomal protein L3P [Enterococcus sp. 7L76] gi|300848738|gb|EFK76495.1| 50S ribosomal protein L3 [Enterococcus faecalis TUSoD Ef11] gi|306497264|gb|EFM66806.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0411] gi|306501960|gb|EFM71249.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0109] gi|306504666|gb|EFM73866.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0860] gi|306506876|gb|EFM76023.1| 50S ribosomal protein L3 [Enterococcus faecalis TX2134] gi|306509133|gb|EFM78195.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0855] gi|306514567|gb|EFM83121.1| 50S ribosomal protein L3 [Enterococcus faecalis TX4248] gi|310625440|gb|EFQ08723.1| 50S ribosomal protein L3 [Enterococcus faecalis DAPTO 512] gi|310629395|gb|EFQ12678.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0102] gi|310632036|gb|EFQ15319.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0635] gi|311290441|gb|EFQ68997.1| 50S ribosomal protein L3 [Enterococcus faecalis DAPTO 516] gi|311291794|gb|EFQ70350.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0470] gi|315026835|gb|EFT38767.1| 50S ribosomal protein L3 [Enterococcus faecalis TX2137] gi|315028875|gb|EFT40807.1| 50S ribosomal protein L3 [Enterococcus faecalis TX4000] gi|315031139|gb|EFT43071.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0017] gi|315036015|gb|EFT47947.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0027] gi|315145336|gb|EFT89352.1| 50S ribosomal protein L3 [Enterococcus faecalis TX2141] gi|315147171|gb|EFT91187.1| 50S ribosomal protein L3 [Enterococcus faecalis TX4244] gi|315151071|gb|EFT95087.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0012] gi|315153609|gb|EFT97625.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0031] gi|315156211|gb|EFU00228.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0043] gi|315158644|gb|EFU02661.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0312] gi|315160728|gb|EFU04745.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0645] gi|315165901|gb|EFU09918.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1302] gi|315168100|gb|EFU12117.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1341] gi|315171460|gb|EFU15477.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1342] gi|315172694|gb|EFU16711.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1346] gi|315573514|gb|EFU85705.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0309B] gi|315579326|gb|EFU91517.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0630] gi|315582138|gb|EFU94329.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0309A] gi|323479422|gb|ADX78861.1| 50S ribosomal protein L3 [Enterococcus faecalis 62] gi|327534004|gb|AEA92838.1| 50S ribosomal protein L3 [Enterococcus faecalis OG1RF] gi|329577749|gb|EGG59175.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1467] Length = 209 Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 93/214 (43%), Positives = 132/214 (61%), Gaps = 8/214 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQVKTVETDGYEAIQVGYQDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118 +KP +G + N +PK+ + EF K+ +L VG F G +VDVTG T GK Sbjct: 61 SNKPAKGHVAKANTAPKRFIKEF---KNVELGEYEVGKEIKVDVFQAGDVVDVTGTTKGK 117 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF GA+KRH +HG S HR GS G P RVFKNK++AGRMGG+RVT++NLE Sbjct: 118 GFQGAIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGDRVTIQNLE 175 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VV VD +R +IL+KG +PGAKK S I ++ + K+ Sbjct: 176 VVKVDVERNVILIKGNIPGAKK-SLITIKSAVKA 208 >gi|88803750|ref|ZP_01119274.1| 50S ribosomal protein L3 [Polaribacter irgensii 23-P] gi|88780483|gb|EAR11664.1| 50S ribosomal protein L3 [Polaribacter irgensii 23-P] Length = 205 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 83/206 (40%), Positives = 130/206 (63%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ RK+GMT +++ G+ IP TV+ C V RT++ +GY A+Q+G + K+ + Sbjct: 2 SGLIGRKIGMTSLFDENGKNIPCTVIEAGPCVVTQVRTIEVDGYSALQLGFDDKTAKSSN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K + G F KKK+ EF Q +++ +G S ++F G+ VDV+G++ GKGF G Sbjct: 62 KALDGHFKKAGSVAKKKVVEF--QGFEEVYKLGDSISVAHFEEGEFVDVSGVSKGKGFQG 119 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH F G+ +ATHG R+ GS G P RVFK +MAGRMGG++V V+NL V+ Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGDKVKVQNLRVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L++VKG +PG KN+++ ++ Sbjct: 180 VVAEKNLLVVKGAIPG-HKNAFVTIQ 204 >gi|313904952|ref|ZP_07838323.1| 50S ribosomal protein L3 [Eubacterium cellulosolvens 6] gi|313470209|gb|EFR65540.1| 50S ribosomal protein L3 [Eubacterium cellulosolvens 6] Length = 211 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 92/212 (43%), Positives = 121/212 (57%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT +++ G IPVTVL C V +T + +GY AVQVG GE + K Sbjct: 1 MKKAILATKVGMTQIFDETGASIPVTVLQAGPCVVTQVKTEENDGYAAVQVGFGEIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G F V K+ L EFR + V F G +D T ++ GKGF Sbjct: 61 VNKPKKGQFDKAEVPVKRYLQEFRFDNAAE-YEVKQEIKADIFADGDHIDATAISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G DP +VFK K M G MG +VTV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGSCSDPSKVFKGKHMPGHMGHVKVTVQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + L+LVKG VPG KK S I +++S K+ Sbjct: 179 KVDAENNLLLVKGSVPGPKK-SLITIKESVKA 209 >gi|11467717|ref|NP_050769.1| ribosomal protein L3 [Guillardia theta] gi|3914660|sp|O46894|RK3_GUITH RecName: Full=50S ribosomal protein L3, chloroplastic gi|3603042|gb|AAC35703.1| ribosomal protein L3 [Guillardia theta] Length = 204 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 83/201 (41%), Positives = 121/201 (60%), Gaps = 2/201 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ KLGMT +++ G IPVT+L + C V ++ K+ Y A+Q+G + K Sbjct: 1 MKIGLLGTKLGMTQIFDDNGSAIPVTILKVGPCYVTNLKSDTKDNYNAIQIGYQQVDAKK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP G N+ P K L E++V + S F +GQ+V V+G++IGKGF Sbjct: 61 LTKPQLGHLQVNNLPPLKHLKEYKVDATHTFT-IAQQLDVSIFELGQIVSVSGVSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNF THG S +HR GS G P +V K KKMAGR+GG++VT KNL VV Sbjct: 120 AGTVKRHNFTRGPMTHG-SKNHREPGSIGQGSTPAKVHKGKKMAGRLGGHQVTTKNLTVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKN 201 +D ++++KGCVPG + N Sbjct: 179 HLDKDNNVLVLKGCVPGKRGN 199 >gi|262341013|ref|YP_003283868.1| 50S ribosomal protein L3 [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272350|gb|ACY40258.1| 50S ribosomal protein L3 [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 210 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 89/205 (43%), Positives = 133/205 (64%), Gaps = 3/205 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ + +GMT ++ G+ +P TV+ ++ C V+ +T++ +GY +VQ+G GE K+K + Sbjct: 2 SGLIGKNIGMTSIFLENGKNVPCTVIKVNPCYVIQIKTVENDGYFSVQLGTGEKKLKKTN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P+ G F +SP+KKL EFR + L +G S F G+LV+V G++ GKGF G Sbjct: 62 NPLLGHFKKSGLSPRKKLLEFR-ENSISHLKLGEKVSVDTFKKGELVNVKGISKGKGFQG 120 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRHNF G+ +HG RS GS G DP RVFK KKMAG+MG +TVKNLE++ Sbjct: 121 VVKRHNFSGVGERSHGQHNRLRSPGSIGAGSDPSRVFKGKKMAGKMGKKNITVKNLEILK 180 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 +D + LI++KG VPG KNS++++ Sbjct: 181 IDIHQNLIILKGSVPG-NKNSYLMI 204 >gi|42559578|sp|P60457|RL3_SPIKU RecName: Full=50S ribosomal protein L3 gi|34849393|gb|AAP58892.1| ribosomal protein L3 [Spiroplasma kunkelii CR2-3x] Length = 258 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 81/208 (38%), Positives = 132/208 (63%), Gaps = 6/208 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT ++ +GR IPVTV+ +++ V+ T ++NGY A+Q+ + ++ VSK Sbjct: 3 GILGRKIGMTQIFATDGRLIPVTVVEVEHNIVLRVLTKEQNGYQALQLAVEDKRISLVSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G F N +PK+ + E R + D G + FT G+ VDVTG + GKGF+G+ Sbjct: 63 PDQGQFKKANTTPKRFVKEIR---NMDGYNSGDIIKADIFTAGEFVDVTGTSKGKGFTGS 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KRHN+ HG S HR GS G P R+ K+KKM G +G +VT++NLE++++D Sbjct: 120 IKRHNYSRGPMGHG-SGYHRGVGSMGAIA-PNRILKSKKMPGHIGTEKVTIQNLEIIAID 177 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 ++ +LVKG +PG KK +++++++ K Sbjct: 178 TEKNALLVKGSIPGPKKQ-FVVIKEAIK 204 >gi|261338279|ref|ZP_05966163.1| 50S ribosomal protein L3 [Bifidobacterium gallicum DSM 20093] gi|270276934|gb|EFA22788.1| 50S ribosomal protein L3 [Bifidobacterium gallicum DSM 20093] Length = 216 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 86/212 (40%), Positives = 123/212 (58%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+ ++ +KLGM+ V++ G IPVT++ + V +T + +GY AVQ+G G+A + Sbjct: 7 RTALLGKKLGMSQVWDENGFFIPVTLIDVSTNVVTAVKTEETDGYNAVQLGYGQADPTKI 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KPM G F+ V+P++ L E R + + P G + F G VDVTG T GKGF+ Sbjct: 67 TKPMAGHFAKAGVTPRRHLAEVRTENVAEFEP-GQELTAELFPEGVQVDVTGTTKGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F R THG + R GS G P R+ K K+MAGRMG + TV NL ++S Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHDTNTVLNLTIMS 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + G+I VKG +PG K +LVR + K A Sbjct: 186 SDVENGIIAVKGAIPGP-KGGIVLVRSAVKGA 216 >gi|189485085|ref|YP_001956026.1| 50S ribosomal protein L3 [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|212288415|sp|B1GZ83|RL3_UNCTG RecName: Full=50S ribosomal protein L3 gi|170287044|dbj|BAG13565.1| 50S ribosomal protein L3 [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 227 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 85/201 (42%), Positives = 125/201 (62%), Gaps = 2/201 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT V++++G +PVTV+ + +C V RT++KNGY AVQ+G GE K K ++K Sbjct: 5 IIGKKIGMTQVFDVKGNLMPVTVVEVGHCVVTDVRTVEKNGYSAVQLGFGEIKEKGLNKA 64 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 FF N+S K+ L EFRV + VG F G VDV+ +T GKG++G + Sbjct: 65 QAVFFKRNNLSYKRTLKEFRVSEVAG-FSVGHEIKADAFKAGDYVDVSAVTKGKGYAGVI 123 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHNFG +HG S RS GS+G Q P +V K KM+G MG VTV+ L +V+VD Sbjct: 124 KRHNFGMQPVSHGQSDRTRSRGSSGA-QGPQKVLKGLKMSGHMGNEYVTVQKLLIVNVDA 182 Query: 185 KRGLILVKGCVPGAKKNSWIL 205 ++ ++L+KG VP A + + + Sbjct: 183 EKNVLLIKGSVPSANRGTLFI 203 >gi|302388712|ref|YP_003824533.1| LSU ribosomal protein L3P [Thermosediminibacter oceani DSM 16646] gi|302199340|gb|ADL06910.1| LSU ribosomal protein L3P [Thermosediminibacter oceani DSM 16646] Length = 209 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 89/208 (42%), Positives = 129/208 (62%), Gaps = 4/208 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ KLGMT +++ G+ +PVTV+ C V+ +T + +GY A++VG + K ++KP Sbjct: 6 ILGIKLGMTQIFDEAGQAVPVTVVEAGPCVVMQKKTPEIDGYSALKVGFVDVKEHRLTKP 65 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + G F + PKK + E ++ + D VG F G+ VDVTG++IGKGF+G + Sbjct: 66 VLGQFRKYQLKPKKYIRELKIDEVDKY-NVGDEIKVDIFKPGERVDVTGISIGKGFAGGV 124 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR NF +HG S+ HR GS G DP RVFK KKM G +G RVTV+NLE+V VD Sbjct: 125 KRWNFNRGPMSHG-SMYHRRPGSGGA-TDPERVFKGKKMPGHLGHERVTVQNLEIVKVDP 182 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPG KK S + ++ + KS Sbjct: 183 ERNLLLIKGSVPGTKK-SLLYIKSTVKS 209 >gi|270157910|ref|ZP_06186567.1| ribosomal protein L3 [Legionella longbeachae D-4968] gi|289163830|ref|YP_003453968.1| 50S ribosomal subunit protein L3 [Legionella longbeachae NSW150] gi|269989935|gb|EEZ96189.1| ribosomal protein L3 [Legionella longbeachae D-4968] gi|288857003|emb|CBJ10817.1| 50S ribosomal subunit protein L3 [Legionella longbeachae NSW150] Length = 216 Score = 154 bits (389), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 92/199 (46%), Positives = 123/199 (61%), Gaps = 2/199 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ +G +PV+V+ + +V +T+ +GY A+Q+ G K Sbjct: 1 MMIGLLGRKIGMTRVFMADGVSVPVSVVEVHPNRVSQVKTITTDGYSAIQLTGGAKKPGK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKG 119 V+KP+ G F+ + L EF V +D G V S FT GQ VDV+G T GKG Sbjct: 61 VNKPLTGHFAKAEIEAGDMLVEFPVDSEDKFT-AGQVISITDVFTAGQFVDVSGTTKGKG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KR+NF ATHG S SHR GS G Q PGRVFK KKMAG MG R TV++LE+ Sbjct: 120 FAGTVKRYNFRTQDATHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNVRCTVQSLEL 179 Query: 180 VSVDDKRGLILVKGCVPGA 198 V VD +R L+L+KG +PGA Sbjct: 180 VRVDAERNLLLIKGAIPGA 198 >gi|118579119|ref|YP_900369.1| 50S ribosomal protein L3 [Pelobacter propionicus DSM 2379] gi|166233173|sp|A1ALU1|RL3_PELPD RecName: Full=50S ribosomal protein L3 gi|118501829|gb|ABK98311.1| LSU ribosomal protein L3P [Pelobacter propionicus DSM 2379] Length = 209 Score = 154 bits (389), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 85/201 (42%), Positives = 121/201 (60%), Gaps = 3/201 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++ +G R+PVTV+ C V +T +GY AVQVG N SKPM G + Sbjct: 12 MTQIFTEDGTRVPVTVIQAGPCVVTQKKTASIDGYSAVQVGFDSTPAANASKPMLGHCTK 71 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 + L EF+ ++ +G V + FT G VDVTG +IGKGF G +KR+NF G Sbjct: 72 SGQGVFRYLREFKFDAASEM-NLGDVLTVEQFTAGDFVDVTGTSIGKGFQGVIKRYNFRG 130 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 RA+HG S HR+ GS G P RVFKNKKM G++G +VT++ L+V+ VD L+L+ Sbjct: 131 GRASHG-SRFHRAPGSIGASATPSRVFKNKKMPGQLGNTQVTMQCLQVIRVDADDNLLLI 189 Query: 192 KGCVPGAKKNSWILVRDSFKS 212 KG +PG +N+ +L+++S K+ Sbjct: 190 KGAIPG-HRNNIVLIKNSVKA 209 >gi|254495711|ref|ZP_05108627.1| 50S ribosomal protein L3 [Legionella drancourtii LLAP12] gi|254355058|gb|EET13677.1| 50S ribosomal protein L3 [Legionella drancourtii LLAP12] Length = 216 Score = 154 bits (389), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 88/198 (44%), Positives = 118/198 (59%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ EG +PV+V+ + +V +T++ +GY A+Q+ G K Sbjct: 1 MMIGLLGRKIGMTRVFTAEGVSVPVSVVEVHPNRVSQIKTMEADGYAAIQLTGGTKKASK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ + EF V +D + F GQ VDV+G T GKGF Sbjct: 61 VNKAQAGHFAKAEIEAGDMQVEFWVDSEDAFKAGQELSVADVFAAGQFVDVSGTTKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNF ATHG S SHR GS G Q PGRVFK KKMAG MG R TV++LE+V Sbjct: 121 AGTVKRHNFRTQDATHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNVRCTVQSLELV 180 Query: 181 SVDDKRGLILVKGCVPGA 198 VD +R L+L+KG +PGA Sbjct: 181 RVDAERNLLLIKGAIPGA 198 >gi|238601104|ref|XP_002395321.1| hypothetical protein MPER_04643 [Moniliophthora perniciosa FA553] gi|215465855|gb|EEB96251.1| hypothetical protein MPER_04643 [Moniliophthora perniciosa FA553] Length = 259 Score = 154 bits (389), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 93/205 (45%), Positives = 118/205 (57%), Gaps = 25/205 (12%) Query: 30 LDNCQVVVH-RTLDKNG--YMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ 86 LDNCQV + T KN Y AVQV A + K ++ MRG F V K+ + EF + Sbjct: 1 LDNCQVTANIVTARKNASEYHAVQVAASDRPFKTTTQQMRGHFRKAQVPCKRVVREFPIT 60 Query: 87 KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146 D + PVG+ S +F GQ VDV +IGKGF+G MKR F GLRA+HGVSISHRS G Sbjct: 61 PDAHV-PVGTTLSAIHFVPGQFVDVIAKSIGKGFAGGMKRWGFKGLRASHGVSISHRSIG 119 Query: 147 STGCRQ--------------------DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKR 186 +TG Q +PGRV+ KKM GR+GG R+T +NL VV VD + Sbjct: 120 ATGAHQVLYQKDIFVAYLIDKASVSRNPGRVWPGKKMPGRLGGERITTQNLAVVRVDSEL 179 Query: 187 GLILVKGCVPGAKKNSWILVRDSFK 211 LI VKG VPG +S ++V+D+ K Sbjct: 180 NLIYVKGAVPGV-DDSHVMVKDAKK 203 >gi|323700806|ref|ZP_08112718.1| 50S ribosomal protein L3 [Desulfovibrio sp. ND132] gi|323460738|gb|EGB16603.1| 50S ribosomal protein L3 [Desulfovibrio desulfuricans ND132] Length = 210 Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 86/204 (42%), Positives = 120/204 (58%), Gaps = 2/204 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT ++ +G PVTV+ C V+ +T DK GY A+Q+G + V+K Sbjct: 6 GLLGRKLGMTRIFKSDGTICPVTVIEAGPCAVMQIKTTDKEGYNALQLGYDTVPERKVNK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 PM+G + + + L EF ++ D +G + F G+ V VTG + GKGF G Sbjct: 66 PMKGHMAKAGDALYRHLKEFPLEVVDGY-ELGQEITVDIFAAGEKVKVTGTSKGKGFQGV 124 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF G RA+HG HR GS G PGRV+K K+MAG MG RVT+ N+E+V V Sbjct: 125 MKRHNFNGSRASHGAEKVHRVPGSVGNATYPGRVWKGKRMAGHMGSERVTLSNVEIVDVR 184 Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207 + ++LVKG VPG N +++R Sbjct: 185 PEDNVLLVKGQVPGP-NNGLVMIR 207 >gi|224537817|ref|ZP_03678356.1| hypothetical protein BACCELL_02704 [Bacteroides cellulosilyticus DSM 14838] gi|224520503|gb|EEF89608.1| hypothetical protein BACCELL_02704 [Bacteroides cellulosilyticus DSM 14838] Length = 205 Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 84/205 (40%), Positives = 126/205 (61%), Gaps = 3/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EG+ +P TV+ C V ++++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKSVEKDGYAAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PKK L EF+ + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFNDVTFVDVIGTSKGKGFQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ +ATHG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 L+L+KG VPG K + I+ + Sbjct: 181 LPDHNLLLIKGSVPGCKGSIVIIEK 205 >gi|261854950|ref|YP_003262233.1| 50S ribosomal protein L3 [Halothiobacillus neapolitanus c2] gi|261835419|gb|ACX95186.1| 50S ribosomal protein L3 [Halothiobacillus neapolitanus c2] Length = 214 Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 94/213 (44%), Positives = 126/213 (59%), Gaps = 4/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK+GMT V++ G PVTV+ ++ +V +T + +GY AVQV G + Sbjct: 1 MSLGVVGRKVGMTRVFDDAGVSTPVTVIEVEPNRVTQLKTPEVDGYTAVQVTTGTRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 V+K M G ++ + + EFR+ D+ P G+ + S F + VDV G + GK Sbjct: 61 VTKAMAGHYAKAETASGRMSTEFRISADELAGFQP-GAEITVSIFDGVEKVDVAGQSKGK 119 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF+G +KR+NF ATHG S SHR GS G Q PGRVF KKM+G MG RV+ L+ Sbjct: 120 GFAGTVKRYNFRTQDATHGNSRSHRVPGSIGQNQTPGRVFPGKKMSGHMGDERVSSLGLK 179 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VV VD +RGLILVKG VPG+ ++VR S K Sbjct: 180 VVRVDVERGLILVKGAVPGSTGGD-VIVRPSVK 211 >gi|188584836|ref|YP_001916381.1| LSU ribosomal protein L3P [Natranaerobius thermophilus JW/NM-WN-LF] gi|226730540|sp|B2A4D9|RL3_NATTJ RecName: Full=50S ribosomal protein L3 gi|179349523|gb|ACB83793.1| LSU ribosomal protein L3P [Natranaerobius thermophilus JW/NM-WN-LF] Length = 210 Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 124/212 (58%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT +++ EG +PVTV+ C VV + D +GY AVQ+G + K Sbjct: 1 MKKAILGKKVGMTQIFSEEGEVMPVTVVKAGPCSVVQKKVEDTDGYNAVQIGFEDKKENK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 KP +G F V+PKK L EF ++ ++ L VG + F VG +DVTG + KGF Sbjct: 61 TKKPEKGHFEKAGVNPKKHLTEFELESMEN-LEVGQELTVEQFEVGDQIDVTGTSKSKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR THG S +R+ GS G D RVFK + + GRMGGN VTV+ LEVV Sbjct: 120 QGTIKRFKHSTGPKTHG-SRFYRAPGSLGS-MDISRVFKGQTLPGRMGGNTVTVQRLEVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + L+LVKG VPG KK +V DS K+ Sbjct: 178 DVDKENNLLLVKGAVPGPKKGLLKIV-DSVKA 208 >gi|42526279|ref|NP_971377.1| 50S ribosomal protein L3 [Treponema denticola ATCC 35405] gi|81831476|sp|Q73PN1|RL3_TREDE RecName: Full=50S ribosomal protein L3 gi|41816391|gb|AAS11258.1| ribosomal protein L3 [Treponema denticola ATCC 35405] gi|325473223|gb|EGC76418.1| 50S ribosomal protein L3 [Treponema denticola F0402] Length = 208 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 90/210 (42%), Positives = 130/210 (61%), Gaps = 5/210 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++N G +PVTV+ ++ VV + +K GY +V +G GE K K+ SK Sbjct: 3 GLIGKKIGMTQIFNEVGHLMPVTVIQVEPNTVVALKDKEKFGYSSVVLGLGELKEKHTSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G FS ++ P K L EFR D + VG F +D+T ++ GKGF G Sbjct: 63 PYAGQFSG-DIKPLKLLKEFR--DFDKEVAVGDKLGVEAFEKVSYLDITAISKGKGFQGV 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR +GG RA+HG S HR GSTG PGR FKN M GRMG ++VTV+NL++V +D Sbjct: 120 MKRWGYGGGRASHG-SKFHREAGSTGHCTTPGRSFKNTTMPGRMGFDKVTVQNLQIVKID 178 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + G+I+V+G VPG KK++ + ++ + K A Sbjct: 179 PELGVIMVRGSVPG-KKDATVFLKSAVKRA 207 >gi|29348136|ref|NP_811639.1| 50S ribosomal protein L3 [Bacteroides thetaiotaomicron VPI-5482] gi|253569590|ref|ZP_04847000.1| 50S ribosomal protein L3 [Bacteroides sp. 1_1_6] gi|298386181|ref|ZP_06995738.1| 50S ribosomal protein L3 [Bacteroides sp. 1_1_14] gi|42559628|sp|Q8A476|RL3_BACTN RecName: Full=50S ribosomal protein L3 gi|29340039|gb|AAO77833.1| 50S ribosomal protein L3 [Bacteroides thetaiotaomicron VPI-5482] gi|251841609|gb|EES69690.1| 50S ribosomal protein L3 [Bacteroides sp. 1_1_6] gi|298261409|gb|EFI04276.1| 50S ribosomal protein L3 [Bacteroides sp. 1_1_14] Length = 205 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 82/203 (40%), Positives = 125/203 (61%), Gaps = 3/203 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PK+ L EF+ + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKRAGVTPKRHLAEFK--EFETELNLGDTITVEMFNDATFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ +ATHG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205 L+L+KG +PG K + I+ Sbjct: 181 IADHNLLLIKGSIPGCKGSIVII 203 >gi|319893200|ref|YP_004150075.1| LSU ribosomal protein L3p (L3e) [Staphylococcus pseudintermedius HKU10-03] gi|317162896|gb|ADV06439.1| LSU ribosomal protein L3p (L3e) [Staphylococcus pseudintermedius HKU10-03] gi|323463752|gb|ADX75905.1| ribosomal protein L3 [Staphylococcus pseudintermedius ED99] Length = 219 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 93/220 (42%), Positives = 127/220 (57%), Gaps = 11/220 (5%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+Q+G Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQIGFENKEAYK 60 Query: 53 AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 G K +K G + +PK+ + EFR DD VG S F VG ++DVT Sbjct: 61 KGRKTNKYATKAAEGHAKKADAAPKRFIREFRNVNVDDY-EVGQEVSVDTFEVGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G + GKGF GA+KRHN +HG S HR+ GS G D RVFK +K+ GRMGGN V Sbjct: 120 GTSKGKGFQGAIKRHNQSRGPMSHG-SHFHRAPGSIGMASDASRVFKGQKLPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 TV+NLEVV VD + +ILVKG VPG KK ++ ++ + K+ Sbjct: 179 TVQNLEVVQVDTENNVILVKGNVPGPKK-GFVQIQSAIKA 217 >gi|218961433|ref|YP_001741208.1| 50S ribosomal subunit protein L3 [Candidatus Cloacamonas acidaminovorans] gi|167730090|emb|CAO81002.1| 50S ribosomal subunit protein L3 [Candidatus Cloacamonas acidaminovorans] Length = 210 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 83/206 (40%), Positives = 122/206 (59%), Gaps = 3/206 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ IPVTV+ C+V+ RT +NGY A+Q+G E + VSK Sbjct: 3 GLIGKKIGMTQVFDSDGKVIPVTVIKAGPCKVICKRTEAENGYEAIQIGYEEIPARKVSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 P++G F N + + EFR + + +G F + V V+ + G+GF+ Sbjct: 63 PLQGHFKKYNSPFYRYVREFRPSYGQHIESVQIGDELKADIFGENETVSVSANSKGRGFT 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNFGG ++HG S R GS G P RVFK KMAG+ G +VTV +L+V+ Sbjct: 123 GVMKRHNFGGFISSHGSHESFRGPGSIGQCAQPSRVFKGMKMAGQYGNTKVTVHHLKVIK 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 VD + LI+VKG VPG +NS + + Sbjct: 183 VDPENNLIMVKGAVPG-HRNSLVTIH 207 >gi|239825693|ref|YP_002948317.1| 50S ribosomal protein L3 [Geobacillus sp. WCH70] gi|259646548|sp|C5D3R7|RL3_GEOSW RecName: Full=50S ribosomal protein L3 gi|239805986|gb|ACS23051.1| ribosomal protein L3 [Geobacillus sp. WCH70] Length = 211 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 93/219 (42%), Positives = 128/219 (58%), Gaps = 8/219 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T++K+GY A+Q+G + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTIEKDGYEAIQLGFEDISEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G + N +PK+ + E R D+ VG F G +VDVTG++ GKGF Sbjct: 61 ANKPQIGHAAKANTAPKRFIREIRGANIDEY-EVGQEVKVDIFAEGDIVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G P RVFK+K++ GRMGG RVT++NL++V Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGAIA-PNRVFKSKELPGRMGGQRVTIQNLKIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 VD +R L+L+KG VPG +K I+ KSAV K K Sbjct: 178 KVDPERNLLLIKGNVPGPRKGLVIV-----KSAVKAKAK 211 >gi|218245140|ref|YP_002370511.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 8801] gi|257058165|ref|YP_003136053.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 8802] gi|226725160|sp|B7K335|RL3_CYAP8 RecName: Full=50S ribosomal protein L3 gi|218165618|gb|ACK64355.1| ribosomal protein L3 [Cyanothece sp. PCC 8801] gi|256588331|gb|ACU99217.1| ribosomal protein L3 [Cyanothece sp. PCC 8802] Length = 212 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 86/198 (43%), Positives = 117/198 (59%), Gaps = 3/198 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT +++ E G IPVTV+ C V +T D +GY A+QVG E K K Sbjct: 1 MAVGILGTKLGMTQIFDQETGMAIPVTVVQAGPCTVTQVKTPDTDGYTAIQVGYHEVKEK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++K G ++ P + L E+R+ D +G F G LVDV+G ++G+G Sbjct: 61 ALTKAEIGHLKKIDAPPLRHLKEYRLD-DSSQYQLGDAIKADIFNPGDLVDVSGKSMGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G KRHNF THG S +HR GSTG PGRV+ K+MAG+ G +VT+++L V Sbjct: 120 FAGYQKRHNFKRGNMTHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGQYGATQVTIRHLTV 178 Query: 180 VSVDDKRGLILVKGCVPG 197 V VD R LILVKG +PG Sbjct: 179 VRVDSDRNLILVKGAIPG 196 >gi|311070763|ref|YP_003975686.1| 50S ribosomal protein L3 [Bacillus atrophaeus 1942] gi|310871280|gb|ADP34755.1| 50S ribosomal protein L3 [Bacillus atrophaeus 1942] Length = 209 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 129/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEAAANVVLQKKTAENDGYEAIQLGFDDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +PK+ + E R + D VG F+ G++VDVTG++ GKGF Sbjct: 61 SNKPEKGHVAKAETAPKRFVKELR-GVEMDAYEVGQEVKVEIFSAGEIVDVTGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH +HG S HR GS G DP RVFK K + GRMGG ++TV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGP-VDPNRVFKGKLLPGRMGGEQITVQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA+K S I V+ + KS Sbjct: 178 KVDAERNLLLIKGNVPGARK-SLITVKSAVKS 208 >gi|310779596|ref|YP_003967929.1| LSU ribosomal protein L3P [Ilyobacter polytropus DSM 2926] gi|309748919|gb|ADO83581.1| LSU ribosomal protein L3P [Ilyobacter polytropus DSM 2926] Length = 208 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 88/209 (42%), Positives = 126/209 (60%), Gaps = 3/209 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 +G++A+K+GMT ++ G+ +PVTV+ V+ +T +K+GY A+Q+G E K KN + Sbjct: 2 AGILAKKIGMTQIFE-NGKFVPVTVVEAGPNFVLQKKTEEKDGYTALQLGFDEKKEKNTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KPM G F+ V P + + E + + +G + VD+ G + GKG +G Sbjct: 61 KPMMGIFNKAGVKPLRFVRELKADSVEGY-ELGQEIKVDILDGVEFVDIKGTSKGKGTAG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF G RATHGVS +HR GS G P +V K KMAGR G VTV+NL+VV V Sbjct: 120 VMKRHNFSGNRATHGVSRNHRLGGSIGQSSFPSKVLKGLKMAGRYGNAAVTVQNLKVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D + L+L+KG VPG KN +I+V+ + K Sbjct: 180 DVENNLLLIKGAVPGP-KNGYIVVKPAIK 207 >gi|189465418|ref|ZP_03014203.1| hypothetical protein BACINT_01771 [Bacteroides intestinalis DSM 17393] gi|189437692|gb|EDV06677.1| hypothetical protein BACINT_01771 [Bacteroides intestinalis DSM 17393] Length = 205 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 83/205 (40%), Positives = 125/205 (60%), Gaps = 3/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EG+ +P TV+ C V ++++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKSVEKDGYAAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PKK L EF+ + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFNDATFVDVIGTSKGKGFQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 L+L+KG VPG K + I+ + Sbjct: 181 LPDHNLLLIKGSVPGCKGSIVIIEK 205 >gi|86610028|ref|YP_478790.1| 50S ribosomal protein L3 [Synechococcus sp. JA-2-3B'a(2-13)] gi|109893564|sp|Q2JIM7|RL3_SYNJB RecName: Full=50S ribosomal protein L3 gi|86558570|gb|ABD03527.1| ribosomal protein L3 [Synechococcus sp. JA-2-3B'a(2-13)] Length = 214 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 84/200 (42%), Positives = 123/200 (61%), Gaps = 3/200 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT +++ EG IPVTV+ C V +T +GY A+Q+G K+ Sbjct: 1 MALGILGRKVGMTQIFSPEGLAIPVTVVQAGPCTVTQIKTQATDGYNAIQLGYLPTAEKH 60 Query: 61 VSKPMRGFFSSVNVSPK-KKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +++ RG + V+ + L EFRV + + +G + F+ GQLVDV G +IG+G Sbjct: 61 LTRAQRGHLTKAGVTELLRHLREFRVDQPEAYQ-LGQKITVEMFSPGQLVDVAGTSIGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G KRH+FG +HG S +HR GS G PGRVF +MAGR+GG RVT + L++ Sbjct: 120 FAGYQKRHHFGRGPMSHG-SKNHRRPGSIGAGTTPGRVFPGMRMAGRLGGGRVTTRKLQL 178 Query: 180 VSVDDKRGLILVKGCVPGAK 199 V VD +R L+++KGCVPG + Sbjct: 179 VQVDPERDLLVIKGCVPGVE 198 >gi|87124962|ref|ZP_01080809.1| 50S ribosomal protein L3 [Synechococcus sp. RS9917] gi|86167282|gb|EAQ68542.1| 50S ribosomal protein L3 [Synechococcus sp. RS9917] Length = 218 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 81/211 (38%), Positives = 130/211 (61%), Gaps = 7/211 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +G+ +PVT++ C++ +T + +GY AVQ+G G+ + K Sbjct: 1 MSIGILGKKLGMSQLFDEQGKAVPVTLIEAGPCRITQLKTTETDGYAAVQIGFGDTREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118 V+KP +G + + L E+RV DD+ L +G + F GQ VDV+G ++G+ Sbjct: 61 VNKPAKGHLAKSGEELLRHLSEYRV---DDVAGLELGGAITVGDFEAGQKVDVSGDSMGR 117 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF+G KRH F THG S +HR GSTG PGR++ K+MAGR GG ++T + L Sbjct: 118 GFAGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLT 176 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 ++ +D +R L++VKG VPG K S + +R + Sbjct: 177 ILKIDSERNLLVVKGSVPG-KPGSLLNIRPA 206 >gi|71891975|ref|YP_277705.1| 50S ribosomal subunit protein L3 [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|109893412|sp|Q493K8|RL3_BLOPB RecName: Full=50S ribosomal protein L3 gi|71796081|gb|AAZ40832.1| 50S ribosomal subunit protein L3 [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 217 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 83/196 (42%), Positives = 126/196 (64%), Gaps = 1/196 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT +++ +G IPVT++ + +V + ++ +GY AVQV G K++++ Sbjct: 3 GLIGQKLGMTRLFDKDGVSIPVTMIEITPHRVTQIKNIENDGYCAVQVTTGMKNFKHINR 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P G V + ++EFR ++ L +G + + F + VD+TG++ GKGF+G Sbjct: 63 PETGHMIKSGVDAGRGVWEFRCEEAGMPQLSLGDIITIQIFKNVKKVDITGISKGKGFAG 122 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF A+HG S+SHR+ GS G Q PGRVFK KKMAG++G +VTV+NL+VV+V Sbjct: 123 TIKRWNFHMQDASHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGQLGNYKVTVQNLDVVNV 182 Query: 183 DDKRGLILVKGCVPGA 198 D K L+LVKG VPG Sbjct: 183 DVKLNLLLVKGAVPGT 198 >gi|83591276|ref|YP_431285.1| 50S ribosomal protein L3 [Moorella thermoacetica ATCC 39073] gi|109893524|sp|Q2RFP7|RL3_MOOTA RecName: Full=50S ribosomal protein L3 gi|83574190|gb|ABC20742.1| LSU ribosomal protein L3P [Moorella thermoacetica ATCC 39073] Length = 209 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 86/211 (40%), Positives = 129/211 (61%), Gaps = 4/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR G++ +K+GMT V++ GR IPVTV+ C V+ + +GY AVQVG K + Sbjct: 1 MRKGILGKKIGMTQVFDETGRAIPVTVIQAGPCVVIRKKETSTDGYDAVQVGFEPVKERK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP+ G+F+ V+P + + EFR++ + VG F+ G+ VDVTG++ GKGF Sbjct: 61 VNKPLLGYFNKAGVTPFRYIREFRLENSGEYQ-VGQEIKADVFSPGEKVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH F HG S HR GS + P RVFK +++ G +G RVTV+ LEVV Sbjct: 120 AGGIKRHGFHRGPMEHG-SKYHRRPGSLAAK-GPARVFKGRRLPGHLGAVRVTVQGLEVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +R L+L+KG VPG ++ +++++S K Sbjct: 178 RNDPERNLLLIKGSVPGP-RHGLLVIKNSVK 207 >gi|158337810|ref|YP_001518986.1| 50S ribosomal protein L3 [Acaryochloris marina MBIC11017] gi|189042827|sp|B0C1D3|RL3_ACAM1 RecName: Full=50S ribosomal protein L3 gi|158308051|gb|ABW29668.1| 50S ribosomal protein L3 [Acaryochloris marina MBIC11017] Length = 212 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 82/197 (41%), Positives = 118/197 (59%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT V++ GR IPVTV+ C V +T +GY A+Q+G G K Sbjct: 1 MSVGILGTKLGMTQVFDEAGRAIPVTVVQAGPCPVTQIKTAQTDGYTAIQIGYGSTTEKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G +P + L E+R+ D +G S F+ GQLVD++G +IG+GF Sbjct: 61 LTRPELGHLKKSGSTPVRHLQEYRL-ADVSEYELGQSISADLFSEGQLVDISGTSIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRHNF HG S +HR+ GSTG PGR++ K+MAG+MG + T++ L VV Sbjct: 120 AGYQKRHNFRRGPMGHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGQMGNVKKTIRKLTVV 178 Query: 181 SVDDKRGLILVKGCVPG 197 VD +R ++L+KG VPG Sbjct: 179 RVDAERNVLLIKGSVPG 195 >gi|150015043|ref|YP_001307297.1| 50S ribosomal protein L3 [Clostridium beijerinckii NCIMB 8052] gi|189042837|sp|A6LPR1|RL3_CLOB8 RecName: Full=50S ribosomal protein L3 gi|149901508|gb|ABR32341.1| ribosomal protein L3 [Clostridium beijerinckii NCIMB 8052] Length = 209 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 86/212 (40%), Positives = 128/212 (60%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ RK+GMT +++ +G+ IPVTV+ C VV +TL+ +GY A+QVG E + K Sbjct: 1 MKKAIIGRKVGMTQIFDEKGKVIPVTVVEAGPCVVVQKKTLENDGYEAIQVGFDEIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G F+ + ++ L EFR+ D VG+ F G VDV+ ++ GKGF Sbjct: 61 ANKPRKGHFAKAGATLRRTLKEFRLD-DISQYEVGNEIKADVFGAGDKVDVSAVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G++KR N THG S HR+ GS G DP R FKNK+M G MG TV NLEVV Sbjct: 120 QGSIKRWNQQRGPMTHG-SKFHRAPGSMGASSDPSRTFKNKRMPGHMGSVNTTVLNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ LIL+KG +PG K + ++++D+ ++ Sbjct: 179 KVIAEKNLILIKGGIPGPNKGT-VVIKDTVRA 209 >gi|153872677|ref|ZP_02001498.1| Ribosomal protein L3 [Beggiatoa sp. PS] gi|152070858|gb|EDN68503.1| Ribosomal protein L3 [Beggiatoa sp. PS] Length = 213 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 91/213 (42%), Positives = 130/213 (61%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G+V K GMT +++ G IPVTV+ ++ +T +GY A+QV + K Sbjct: 1 MALGIVGIKCGMTRLFDTAAGDVIPVTVIKAPPNRITQIKTQIHDGYQAIQVTSPLKVPK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 +++KP++G + +VS +EFR+ D L +G + F GQ VDVTG+T GK Sbjct: 61 HINKPIKGHLAKASVSTGFGFWEFRLANDTLKELKLGGEIDVTLFVTGQNVDVTGVTKGK 120 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF+G +KRH+F ATHG S+SHR+ GS G Q PGRVFK KKMAG +G R TV+NL Sbjct: 121 GFAGVVKRHHFRTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHLGCQRRTVQNLT 180 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 ++ V ++ L+L+KG VPGA N ++VR + K Sbjct: 181 IMRVIAEKNLLLIKGAVPGA-PNGTVIVRPAIK 212 >gi|330837655|ref|YP_004412296.1| 50S ribosomal protein L3P [Spirochaeta coccoides DSM 17374] gi|329749558|gb|AEC02914.1| LSU ribosomal protein L3P [Spirochaeta coccoides DSM 17374] Length = 206 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 92/208 (44%), Positives = 122/208 (58%), Gaps = 5/208 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EGR PVTV+ ++ VV RT +KNGY A +GA + K V+K Sbjct: 3 GLIGKKIGMTQVFDAEGRLTPVTVIKIEGNVVVADRTEEKNGYNAALLGAIDKKKSRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+ K+ L EFR D + VG V F VDVTG T GKGF G Sbjct: 63 PYAGQFPE-GVAVKRNLVEFR--DFDKEVSVGEVLGVDLFKDIAFVDVTGTTKGKGFQGG 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G RA+HG S HR G T P FK +MAG MG R TV+NL VV VD Sbjct: 120 MKRHGFAGGRASHG-SKFHRDIGGTAMSTTPAHTFKGHRMAGHMGFERTTVQNLRVVRVD 178 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 ++ +++VKG +PG + S ++V+ + K Sbjct: 179 EELQVLMVKGAIPGPAQ-SVVIVKKAVK 205 >gi|307718206|ref|YP_003873738.1| 50S ribosomal protein L3 [Spirochaeta thermophila DSM 6192] gi|306531931|gb|ADN01465.1| 50S ribosomal protein L3 [Spirochaeta thermophila DSM 6192] Length = 208 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 92/204 (45%), Positives = 121/204 (59%), Gaps = 3/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ RKLGMT V++ G +PVTV+ ++ VV RT +++GY A+ +GA K K Sbjct: 3 GVIGRKLGMTQVFDANGYVVPVTVIKVEKNTVVDVRTPERHGYRALVLGAFPLKASRAVK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F + PKK L E R + D P G F + VDV G++ GKG+ G Sbjct: 63 PYLGQFQKRGLEPKKVLREIR-DFEGDYKP-GDEIGVEIFEGVRFVDVRGLSKGKGYQGV 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G A+HG S HR+HGSTG P +V K KMAGRMGG +V V+NL +V VD Sbjct: 121 MKRHGFSGGPASHG-SKFHRAHGSTGQSAYPSKVLKGTKMAGRMGGVQVCVQNLRIVEVD 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207 +RG +LV+G VPG +K I+ R Sbjct: 180 KERGCLLVEGAVPGPRKGVVIVTR 203 >gi|154505169|ref|ZP_02041907.1| hypothetical protein RUMGNA_02682 [Ruminococcus gnavus ATCC 29149] gi|153794648|gb|EDN77068.1| hypothetical protein RUMGNA_02682 [Ruminococcus gnavus ATCC 29149] Length = 242 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 95/229 (41%), Positives = 129/229 (56%), Gaps = 20/229 (8%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M+ ++A K+GMT ++N E G IPVTVL C V +T++ +GY AVQVG + K K Sbjct: 16 MKKAILATKVGMTQIFNEETGVLIPVTVLQAGPCVVTQVKTVENDGYKAVQVGFVDKKEK 75 Query: 60 ----------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103 V+K +G F VS K+ + EFR + ++ + F Sbjct: 76 IVTKDKSGKKEIAHRNGVTKAEKGHFDKAGVSGKRYVKEFRFENAEEYT-LAQEIKADIF 134 Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 G VD T ++ GKGF GA+KRHN THG S HR GS G DP +VFK KKM Sbjct: 135 AAGDKVDATAISKGKGFQGAIKRHNQSRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKM 193 Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G+MGG ++TV+NLEVV VD + L+LVKG VPG KK S I ++++ K+ Sbjct: 194 PGQMGGKKITVQNLEVVRVDAENNLLLVKGSVPGPKK-SLITIKETVKA 241 >gi|33862114|ref|NP_893675.1| 50S ribosomal protein L3 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|42559598|sp|Q7UZU7|RL3_PROMP RecName: Full=50S ribosomal protein L3 gi|33634332|emb|CAE20017.1| 50S ribosomal protein L3 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 217 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 80/197 (40%), Positives = 125/197 (63%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +G +PVT++ C+V +T +GY A+Q+G G +K K+ Sbjct: 1 MSIGILGKKLGMSQLFDKDGNAVPVTLIEAGPCRVTQLKTQPLDGYTAIQIGYGVSKDKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SKP +G K L E+RV+++ +G + + F VGQ VD++G ++G+GF Sbjct: 61 LSKPEKGHLLKSGEILLKHLKEYRVEENSSY-EIGKEITVTNFEVGQKVDISGKSMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRH F +HG S +HR+ GSTG PGR++ K+MAGR GG ++T K L VV Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKKITTKGLLVV 178 Query: 181 SVDDKRGLILVKGCVPG 197 +DD++ L++VKG VPG Sbjct: 179 KIDDQKNLLVVKGSVPG 195 >gi|289550143|ref|YP_003471047.1| LSU ribosomal protein L3p (L3e) [Staphylococcus lugdunensis HKU09-01] gi|289179675|gb|ADC86920.1| LSU ribosomal protein L3p (L3e) [Staphylococcus lugdunensis HKU09-01] Length = 220 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 94/219 (42%), Positives = 124/219 (56%), Gaps = 11/219 (5%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG + + Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60 Query: 59 ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 K +KP G +PK+ + EFR + D VG S F G ++DVT Sbjct: 61 KDAKSNKYATKPAEGHAKKAGTAPKRFIREFR-NVNVDEYEVGQEVSVDTFEAGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH HG S HR+ GS G D RVFK +K GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMAHG-SHFHRAPGSVGMASDASRVFKGQKAPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 TV+NLEVV VD + G+ILVKG VPGAKK + ++ S K Sbjct: 179 TVQNLEVVQVDTENGVILVKGNVPGAKK-GLVEIKSSIK 216 >gi|296333113|ref|ZP_06875567.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305672815|ref|YP_003864486.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. spizizenii str. W23] gi|296149729|gb|EFG90624.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411058|gb|ADM36176.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. spizizenii str. W23] Length = 209 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 129/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ ++ + +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKSTENDGYEAIQLGFDDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +PK+ + E R + D VG F+ G++VDVTG++ GKGF Sbjct: 61 SNKPEKGHVAKAETAPKRFVKELR-GVEMDAYEVGQEVKVEIFSAGEIVDVTGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH +HG S HR GS G DP RVFK K + GRMGG ++TV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGP-VDPNRVFKGKLLPGRMGGEQITVQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGAKK S I V+ + KS Sbjct: 178 KVDAERNLLLIKGNVPGAKK-SLITVKSAVKS 208 >gi|283767342|ref|ZP_06340257.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus H19] gi|283461221|gb|EFC08305.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus H19] Length = 220 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 95/219 (43%), Positives = 124/219 (56%), Gaps = 11/219 (5%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+QVG Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEAKENLVLQKKTVEVDGYNAIQVGFEDKKAYK 60 Query: 53 AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 K +KP G + +PK+ + EFR D D VG S F G ++DVT Sbjct: 61 KDAKSNKYANKPAEGHAKKADAAPKRFIREFR-NVDVDAYEVGQEVSVDTFVAGDVIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH +HG S HR+ GS G D RVFK +KM GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQSRGPMSHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 TV+NLEVV VD + +ILVKG VPG KK + +R S K Sbjct: 179 TVQNLEVVQVDTENKVILVKGNVPGPKK-GLVEIRTSIK 216 >gi|238018623|ref|ZP_04599049.1| hypothetical protein VEIDISOL_00458 [Veillonella dispar ATCC 17748] gi|237865094|gb|EEP66384.1| hypothetical protein VEIDISOL_00458 [Veillonella dispar ATCC 17748] Length = 213 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 97/213 (45%), Positives = 131/213 (61%), Gaps = 5/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ +KLGMT V+ EG+ +PVTV+ VV +T++ +GY AVQ+G G K K+ Sbjct: 1 MSKAILGKKLGMTQVFTAEGQLVPVTVVETTPSVVVRVKTVETDGYEAVQIGYGSIKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP++G F V+P K L E RV D VG + F G+LVDV G GKGF Sbjct: 61 LTKPVKGQFDKAGVAPVKYLREVRVANAADYT-VGQTLAADIFAEGELVDVVGTGKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTG--CRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KRHNF THG S SHR GS G G+V+K KK+ G+MGG RVTV+ L Sbjct: 120 AGTIKRHNFSRGPETHG-SKSHREPGSIGPMISGGGGKVYKGKKLPGQMGGYRVTVQRLS 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG +PGA K S ++VR++ K Sbjct: 179 VEKVDAERNLLLVKGGIPGA-KGSLVMVRNTVK 210 >gi|145588242|ref|YP_001154839.1| ribosomal protein L3 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189042856|sp|A4SUW1|RL3_POLSQ RecName: Full=50S ribosomal protein L3 gi|145046648|gb|ABP33275.1| LSU ribosomal protein L3P [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 218 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 83/207 (40%), Positives = 124/207 (59%), Gaps = 2/207 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ EG IPVTV+ + + ++ +T +GY A+Q+ G + Sbjct: 1 MSLGLIGRKVGMTRLFTDEGDSIPVTVIDVSDNRIAQIKTQATDGYDAIQLAHGTRRATR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQ--KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 V+K M G F+ V L EF++ K ++ P + + + FT GQ VDV G++IGK Sbjct: 61 VTKAMAGHFAKAGVMAGNGLNEFQLDAAKIAEMTPGQVIPADTAFTAGQKVDVQGVSIGK 120 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G++G +KR++F RA+HG S SH GS G QDPGRVF K+M G +G TV+NL Sbjct: 121 GYAGTIKRYHFASGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTRTVQNLV 180 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWIL 205 + +D +R LI+VKG +PGA I+ Sbjct: 181 IARIDAERNLIMVKGAIPGAPGGKVIV 207 >gi|183601944|ref|ZP_02963313.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis HN019] gi|219682857|ref|YP_002469240.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis AD011] gi|241190433|ref|YP_002967827.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195839|ref|YP_002969394.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218829|gb|EDT89471.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis HN019] gi|219620507|gb|ACL28664.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis AD011] gi|240248825|gb|ACS45765.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250393|gb|ACS47332.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289178157|gb|ADC85403.1| LSU ribosomal protein L3P [Bifidobacterium animalis subsp. lactis BB-12] gi|295793420|gb|ADG32955.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis V9] Length = 216 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 85/212 (40%), Positives = 123/212 (58%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+ ++ +KLGM+ V++ G +PVT++ + V + + +GY AVQ+G G+ + V Sbjct: 7 RNALLGKKLGMSQVWDENGFFVPVTLVEVSTNVVTAVKNEETDGYKAVQLGYGQVDPRKV 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KPM G F+ V+P++ L E R + +D P G + F G VDVTG T GKGF+ Sbjct: 67 TKPMAGHFAKAGVTPRRHLAEVRTENVEDFEP-GQELTAEVFPEGVQVDVTGTTKGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F R THG + R GS G P R+ K K+MAGRMG TV+NL VVS Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTNTVQNLTVVS 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + G++ +KG +PG K +LVR + K A Sbjct: 186 SDVENGILAIKGAIPGP-KGGIVLVRSAVKGA 216 >gi|313158234|gb|EFR57636.1| 50S ribosomal protein L3 [Alistipes sp. HGB5] Length = 204 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 84/198 (42%), Positives = 117/198 (59%), Gaps = 4/198 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT VY+ EG+ IP TV+ C V +T++K+ Y AVQ+ E K+ S Sbjct: 2 SGLIGKKIGMTSVYSAEGKNIPCTVIEAGPCVVTQIKTVEKDTYEAVQIAYDEKSEKHTS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 + G F +PK+K+ EF+ + +L G + F+ VDVTG++ GKGF G Sbjct: 62 SSLLGHFKKAGTTPKRKMAEFKGMPEVNL---GDTLTVELFSEEDWVDVTGISKGKGFQG 118 Query: 123 AMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG+ THG R GS G P RVFK K++ G+MGG +V V NL V+ Sbjct: 119 VVKRHGFGGVGGQTHGQHNRQRKPGSLGASSYPSRVFKGKRLPGQMGGEQVKVLNLRVLK 178 Query: 182 VDDKRGLILVKGCVPGAK 199 V + LILVKG +PGAK Sbjct: 179 VIPESNLILVKGSIPGAK 196 >gi|149179414|ref|ZP_01857968.1| 50S ribosomal protein L3 [Planctomyces maris DSM 8797] gi|148841725|gb|EDL56134.1| 50S ribosomal protein L3 [Planctomyces maris DSM 8797] Length = 229 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 86/224 (38%), Positives = 126/224 (56%), Gaps = 20/224 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT +Y+ +G +PVTV+ C V+ RTLD +GY AVQVG + + Sbjct: 1 MPVGLLGKKVGMTQIYD-DGVMVPVTVIQAGPCHVLQVRTLDTDGYEAVQVGFEDKPRRL 59 Query: 61 VSKPMRGFFSSVN-------------------VSPKKKLFEFRVQKDDDLLPVGSVFSPS 101 ++ RG ++++ PK+ + EFR +D VG + S Sbjct: 60 AARSERGHVAALDSKRQKKRAESGVAVVDKAGCEPKRFVKEFRTDGEDHGCEVGGELTVS 119 Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +DV G + G+GF+G MKRHNF G RATHGV HR GS G DP RV K Sbjct: 120 VFADVPFIDVIGTSKGRGFAGVMKRHNFSGQRATHGVKRVHRHGGSIGMSADPSRVLKGT 179 Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWIL 205 +M GR GG ++TV++L+VV VD++ G++LV+G VPG ++ Sbjct: 180 RMGGRYGGKQITVRHLKVVRVDEENGVLLVRGAVPGPNGGDLVI 223 >gi|15925240|ref|NP_372774.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus Mu50] gi|15927830|ref|NP_375363.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus N315] gi|21283898|ref|NP_646986.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MW2] gi|49484466|ref|YP_041690.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MRSA252] gi|49487032|ref|YP_044253.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MSSA476] gi|82751839|ref|YP_417580.1| 50S ribosomal protein L3 [Staphylococcus aureus RF122] gi|87161988|ref|YP_494839.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88196162|ref|YP_500979.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150394755|ref|YP_001317430.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus JH1] gi|151222364|ref|YP_001333186.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus str. Newman] gi|156980565|ref|YP_001442824.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus Mu3] gi|161353538|ref|YP_187049.2| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus COL] gi|221140148|ref|ZP_03564641.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253317010|ref|ZP_04840223.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253729916|ref|ZP_04864081.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253734341|ref|ZP_04868506.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus TCH130] gi|255007030|ref|ZP_05145631.2| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257423735|ref|ZP_05600164.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus 55/2053] gi|257426413|ref|ZP_05602815.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus 65-1322] gi|257429052|ref|ZP_05605439.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus 68-397] gi|257431698|ref|ZP_05608061.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus E1410] gi|257434659|ref|ZP_05610710.1| LSU ribosomal protein L3 [Staphylococcus aureus subsp. aureus M876] gi|257794596|ref|ZP_05643575.1| 50S ribosomal protein L3 [Staphylococcus aureus A9781] gi|258408802|ref|ZP_05681086.1| 50S ribosomal protein L3 [Staphylococcus aureus A9763] gi|258422401|ref|ZP_05685313.1| LSU ribosomal protein L3 [Staphylococcus aureus A9719] gi|258422697|ref|ZP_05685602.1| LSU ribosomal protein L3 [Staphylococcus aureus A9635] gi|258439790|ref|ZP_05690536.1| 50S ribosomal protein L3 [Staphylococcus aureus A9299] gi|258442654|ref|ZP_05691214.1| 50S ribosomal protein L3 [Staphylococcus aureus A8115] gi|258446647|ref|ZP_05694802.1| 50S ribosomal protein L3 [Staphylococcus aureus A6300] gi|258450235|ref|ZP_05698327.1| 50S ribosomal protein L3 [Staphylococcus aureus A6224] gi|258450755|ref|ZP_05698814.1| 50S ribosomal protein L3 [Staphylococcus aureus A5948] gi|258455393|ref|ZP_05703353.1| ribosomal protein L3 [Staphylococcus aureus A5937] gi|262048514|ref|ZP_06021398.1| 50S ribosomal protein L3 [Staphylococcus aureus D30] gi|262052039|ref|ZP_06024250.1| 50S ribosomal protein L3 [Staphylococcus aureus 930918-3] gi|269203883|ref|YP_003283152.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ED98] gi|282893688|ref|ZP_06301920.1| 50S ribosomal protein L3 [Staphylococcus aureus A8117] gi|282902153|ref|ZP_06310046.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C160] gi|282906593|ref|ZP_06314441.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus Btn1260] gi|282909563|ref|ZP_06317374.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911810|ref|ZP_06319606.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus WBG10049] gi|282915099|ref|ZP_06322876.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus M899] gi|282917595|ref|ZP_06325347.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus D139] gi|282920825|ref|ZP_06328543.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C427] gi|282922119|ref|ZP_06329815.1| 50S ribosomal protein L3 [Staphylococcus aureus A9765] gi|282925730|ref|ZP_06333378.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C101] gi|282926796|ref|ZP_06334423.1| 50S ribosomal protein L3 [Staphylococcus aureus A10102] gi|283959028|ref|ZP_06376469.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus A017934/97] gi|284025276|ref|ZP_06379674.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus 132] gi|293497503|ref|ZP_06665357.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus 58-424] gi|293511078|ref|ZP_06669775.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus M809] gi|293549684|ref|ZP_06672356.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus M1015] gi|294848783|ref|ZP_06789528.1| 50S ribosomal protein L3 [Staphylococcus aureus A9754] gi|295404926|ref|ZP_06814739.1| 50S ribosomal protein L3 [Staphylococcus aureus A8819] gi|295428833|ref|ZP_06821457.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus EMRSA16] gi|296275959|ref|ZP_06858466.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MR1] gi|297209937|ref|ZP_06926333.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297243984|ref|ZP_06927874.1| 50S ribosomal protein L3 [Staphylococcus aureus A8796] gi|297589681|ref|ZP_06948322.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MN8] gi|300910949|ref|ZP_07128399.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus TCH70] gi|304379434|ref|ZP_07362169.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|42559569|sp|P60448|RL3_STAAM RecName: Full=50S ribosomal protein L3 gi|42559570|sp|P60449|RL3_STAAN RecName: Full=50S ribosomal protein L3 gi|42559571|sp|P60450|RL3_STAAW RecName: Full=50S ribosomal protein L3 gi|56749372|sp|Q6G771|RL3_STAAS RecName: Full=50S ribosomal protein L3 gi|56749401|sp|Q6GEI3|RL3_STAAR RecName: Full=50S ribosomal protein L3 gi|109893558|sp|Q2FEN9|RL3_STAA3 RecName: Full=50S ribosomal protein L3 gi|109893559|sp|Q2YYP6|RL3_STAAB RecName: Full=50S ribosomal protein L3 gi|123291758|sp|Q2FW06|RL3_STAA8 RecName: Full=50S ribosomal protein L3 gi|166234598|sp|A7X5G3|RL3_STAA1 RecName: Full=50S ribosomal protein L3 gi|172049048|sp|A6QJ92|RL3_STAAE RecName: Full=50S ribosomal protein L3 gi|189029483|sp|A6U3X5|RL3_STAA2 RecName: Full=50S ribosomal protein L3 gi|13702050|dbj|BAB43342.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus N315] gi|14248023|dbj|BAB58412.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus Mu50] gi|21205340|dbj|BAB96034.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MW2] gi|49242595|emb|CAG41316.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MRSA252] gi|49245475|emb|CAG43952.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MSSA476] gi|82657370|emb|CAI81811.1| 50S ribosomal protein L3 [Staphylococcus aureus RF122] gi|87127962|gb|ABD22476.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203720|gb|ABD31530.1| ribosomal protein L3, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|149947207|gb|ABR53143.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus JH1] gi|150375164|dbj|BAF68424.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus str. Newman] gi|156722700|dbj|BAF79117.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus Mu3] gi|253726363|gb|EES95092.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253727658|gb|EES96387.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus TCH130] gi|257272753|gb|EEV04855.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus 55/2053] gi|257276044|gb|EEV07495.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus 65-1322] gi|257279533|gb|EEV10120.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus 68-397] gi|257282577|gb|EEV12709.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus E1410] gi|257285255|gb|EEV15371.1| LSU ribosomal protein L3 [Staphylococcus aureus subsp. aureus M876] gi|257788568|gb|EEV26908.1| 50S ribosomal protein L3 [Staphylococcus aureus A9781] gi|257840485|gb|EEV64945.1| 50S ribosomal protein L3 [Staphylococcus aureus A9763] gi|257841832|gb|EEV66269.1| LSU ribosomal protein L3 [Staphylococcus aureus A9719] gi|257847108|gb|EEV71117.1| LSU ribosomal protein L3 [Staphylococcus aureus A9635] gi|257847566|gb|EEV71568.1| 50S ribosomal protein L3 [Staphylococcus aureus A9299] gi|257851775|gb|EEV75709.1| 50S ribosomal protein L3 [Staphylococcus aureus A8115] gi|257854715|gb|EEV77663.1| 50S ribosomal protein L3 [Staphylococcus aureus A6300] gi|257856327|gb|EEV79236.1| 50S ribosomal protein L3 [Staphylococcus aureus A6224] gi|257861538|gb|EEV84340.1| 50S ribosomal protein L3 [Staphylococcus aureus A5948] gi|257862604|gb|EEV85372.1| ribosomal protein L3 [Staphylococcus aureus A5937] gi|259160094|gb|EEW45127.1| 50S ribosomal protein L3 [Staphylococcus aureus 930918-3] gi|259163372|gb|EEW47930.1| 50S ribosomal protein L3 [Staphylococcus aureus D30] gi|262076173|gb|ACY12146.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ED98] gi|269941839|emb|CBI50249.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus TW20] gi|282312559|gb|EFB42963.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C101] gi|282315240|gb|EFB45624.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C427] gi|282318557|gb|EFB48915.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus D139] gi|282320820|gb|EFB51154.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus M899] gi|282323506|gb|EFB53822.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus WBG10049] gi|282326542|gb|EFB56844.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282329492|gb|EFB59013.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus Btn1260] gi|282591247|gb|EFB96320.1| 50S ribosomal protein L3 [Staphylococcus aureus A10102] gi|282593587|gb|EFB98580.1| 50S ribosomal protein L3 [Staphylococcus aureus A9765] gi|282596612|gb|EFC01571.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C160] gi|282763746|gb|EFC03874.1| 50S ribosomal protein L3 [Staphylococcus aureus A8117] gi|283471472|emb|CAQ50683.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus ST398] gi|283788620|gb|EFC27447.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus A017934/97] gi|285817912|gb|ADC38399.1| 50S ribosomal protein L3 [Staphylococcus aureus 04-02981] gi|290918731|gb|EFD95807.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus M1015] gi|291096434|gb|EFE26692.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus 58-424] gi|291466065|gb|EFF08594.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus M809] gi|294824162|gb|EFG40586.1| 50S ribosomal protein L3 [Staphylococcus aureus A9754] gi|294969871|gb|EFG45889.1| 50S ribosomal protein L3 [Staphylococcus aureus A8819] gi|295127182|gb|EFG56824.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus EMRSA16] gi|296885610|gb|EFH24547.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297178762|gb|EFH38007.1| 50S ribosomal protein L3 [Staphylococcus aureus A8796] gi|297578192|gb|EFH96905.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MN8] gi|298695506|gb|ADI98728.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ED133] gi|300887929|gb|EFK83124.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus TCH70] gi|302333886|gb|ADL24079.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus JKD6159] gi|302752123|gb|ADL66300.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304341966|gb|EFM07870.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312437339|gb|ADQ76410.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus TCH60] gi|312830599|emb|CBX35441.1| 50S ribosomal protein L3 (BL3) [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129670|gb|EFT85661.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus CGS03] gi|315193502|gb|EFU23898.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus CGS00] gi|315198220|gb|EFU28551.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus CGS01] gi|320140212|gb|EFW32071.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MRSA131] gi|320143482|gb|EFW35263.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MRSA177] gi|329723366|gb|EGG59895.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus 21172] gi|329730333|gb|EGG66723.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus 21193] gi|329732084|gb|EGG68439.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus 21189] Length = 220 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 95/219 (43%), Positives = 124/219 (56%), Gaps = 11/219 (5%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+QVG Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYK 60 Query: 53 AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 K +KP G + +PK+ + EFR D D VG S F G ++DVT Sbjct: 61 KDAKSNKYANKPAEGHAKKADAAPKRFIREFR-NVDVDAYEVGQEVSVDTFVAGDVIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH +HG S HR+ GS G D RVFK +KM GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQSRGPMSHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 TV+NLEVV VD + +ILVKG VPG KK + +R S K Sbjct: 179 TVQNLEVVQVDTENKVILVKGNVPGPKK-GLVEIRTSIK 216 >gi|283796559|ref|ZP_06345712.1| 50S ribosomal protein L3 [Clostridium sp. M62/1] gi|291075973|gb|EFE13337.1| 50S ribosomal protein L3 [Clostridium sp. M62/1] gi|295092547|emb|CBK78654.1| 50S ribosomal protein L3, bacterial [Clostridium cf. saccharolyticum K10] gi|295115275|emb|CBL36122.1| 50S ribosomal protein L3, bacterial [butyrate-producing bacterium SM4/1] Length = 211 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 89/211 (42%), Positives = 123/211 (58%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G PVTVL C V +T + +GY AVQVG + + K Sbjct: 1 MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTAENDGYEAVQVGFVDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKP++G F VS K+ + EFR + + V F G +D T ++ GKGF Sbjct: 61 VSKPVKGHFDKAGVSYKRYVREFRFENASEY-SVKDEIKADIFAAGDKIDATAISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G PGRVFK K M G+MG +VT++NLE+V Sbjct: 120 QGAIKRHGQHRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGQMGHVKVTIQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + L+LVKG VPG KK S + ++++ K Sbjct: 179 KVDAENNLLLVKGAVPGPKK-SLVTIKETVK 208 >gi|225010517|ref|ZP_03700988.1| ribosomal protein L3 [Flavobacteria bacterium MS024-3C] gi|225005346|gb|EEG43297.1| ribosomal protein L3 [Flavobacteria bacterium MS024-3C] Length = 205 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 85/206 (41%), Positives = 122/206 (59%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ RK+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G + K+V+ Sbjct: 2 SGLIGRKIGMTSIFDENGKNIPCTVIETGPCTVTQVRTEEVDGYNALQLGFDDKAEKHVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F VS K+K+ EFR + D +G F G+ VD+ + GKGF G Sbjct: 62 KAAAGHFKKAGVSAKRKVVEFRDFEGD--YKLGDTIGVDLFVEGEFVDIAANSKGKGFQG 119 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH F G+ +ATHG R+ GS G P RVFK KMAGRMGG RV+ NL ++ Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGRMGGVRVSALNLRILK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L++VKGCVPG KN+++ + Sbjct: 180 VVPEKNLLVVKGCVPG-HKNAYVTIE 204 >gi|319944795|ref|ZP_08019059.1| 50S ribosomal protein L3 [Lautropia mirabilis ATCC 51599] gi|319742044|gb|EFV94467.1| 50S ribosomal protein L3 [Lautropia mirabilis ATCC 51599] Length = 217 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 80/195 (41%), Positives = 117/195 (60%), Gaps = 1/195 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 M ++ +G IPVTV+ + +V ++++K+GY AVQ+ GE + V+ G ++ Sbjct: 1 MMRIFTDDGESIPVTVIDVSGNRVSQVKSVEKDGYSAVQLVYGERRASRVNAAEAGHYAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130 V EF V + +P G+V +F VGQ +DV G + GKGF+G +KRHNFG Sbjct: 61 AGVQAGTVAAEFHVSPERAAEVPAGTVLGADHFVVGQYIDVQGTSQGKGFAGTIKRHNFG 120 Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190 RA+HG S SHR GS G QDPGRVF ++M+G+MG TV+NL V +D +RGL+L Sbjct: 121 SQRASHGNSRSHRVPGSIGMAQDPGRVFPGQRMSGQMGNVTRTVQNLVVERIDTERGLLL 180 Query: 191 VKGCVPGAKKNSWIL 205 V+G VPG+ ++ Sbjct: 181 VRGAVPGSAGGHLVI 195 >gi|87300913|ref|ZP_01083755.1| 50S ribosomal protein L3 [Synechococcus sp. WH 5701] gi|87284784|gb|EAQ76736.1| 50S ribosomal protein L3 [Synechococcus sp. WH 5701] Length = 215 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 83/211 (39%), Positives = 126/211 (59%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ G+ IPVTV+ C++ +T +GY A Q+G GE + K Sbjct: 1 MSFGILGKKLGMSQFFDPNGKSIPVTVIEAGPCRITQLKTPATDGYSAAQIGFGETRDKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP G + + L E+R++ D L +G+ + F GQ VDV+G T+G+GF Sbjct: 61 VNKPAAGHLAKSGDELLRHLQEYRLESLDGL-ELGASITVEAFEAGQKVDVSGDTVGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRH F +HG S +HR GSTG PGRV+ K+MAGR GG ++T + L ++ Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHREPGSTGAGTTPGRVYPGKRMAGRYGGKQITTRGLTIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L++VKG VPG K + + +R + + Sbjct: 179 KVDHERNLLVVKGSVPG-KPGALLSIRPALR 208 >gi|313677120|ref|YP_004055116.1| LSU ribosomal protein l3p [Marivirga tractuosa DSM 4126] gi|312943818|gb|ADR23008.1| LSU ribosomal protein L3P [Marivirga tractuosa DSM 4126] Length = 212 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 86/216 (39%), Positives = 123/216 (56%), Gaps = 17/216 (7%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +Y ++GR + TV+ C V + + +GY A+Q+G E K KN Sbjct: 2 SGIIGKKIGMTSIYGVDGRNVACTVIEAGPCVVTQVKKEETDGYSAIQLGYEERKEKNTP 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLL----------PVGSVFSPSYFTVGQLVDVT 112 K ++G F + +PKKKL EFR + D +G VF G VDV Sbjct: 62 KALQGHFKNAQTTPKKKLAEFREYEGYDTFVDKFTLGQTVTIGDVFEE-----GDYVDVA 116 Query: 113 GMTIGKGFSGAMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171 G + GKGF G +KRH FGG+ +ATHG R+ GS G P RVF +MAGR GG+R Sbjct: 117 GSSKGKGFQGVVKRHGFGGVGQATHGQHNRQRAPGSIGGASYPARVFPGMRMAGRTGGDR 176 Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVR 207 V NL V+ + ++ L+LV G +PGA KNS++++ Sbjct: 177 VKNTNLRVLKLIPEKNLLLVSGSIPGA-KNSFVIIE 211 >gi|312130549|ref|YP_003997889.1| lsu ribosomal protein l3p [Leadbetterella byssophila DSM 17132] gi|311907095|gb|ADQ17536.1| LSU ribosomal protein L3P [Leadbetterella byssophila DSM 17132] Length = 205 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 83/198 (41%), Positives = 122/198 (61%), Gaps = 3/198 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT ++N G +P TV+ C V RT + +GY A+Q+G GE K K + Sbjct: 2 SGIIGKKIGMTTIFN-NGAAVPCTVIEAGPCVVTQVRTEETDGYNAIQLGFGEKKEKRTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K + G F N +PK+KL EF+ + + + ++ F G+ VDV+G T GKGF G Sbjct: 61 KALLGHFKKANTTPKRKLVEFK-EFEKEFALGDTIKVEDVFVEGEFVDVSGNTKGKGFQG 119 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG+ ++THG R+ GS G P RVFK +MAGRMG +VT++NL+V+ Sbjct: 120 VVKRHGFGGVGQSTHGQHNRLRAPGSIGACSYPARVFKGLRMAGRMGNTKVTIQNLQVLK 179 Query: 182 VDDKRGLILVKGCVPGAK 199 + ++ LI+V G VPG K Sbjct: 180 LFPEKNLIIVSGSVPGGK 197 >gi|212697253|ref|ZP_03305381.1| hypothetical protein ANHYDRO_01821 [Anaerococcus hydrogenalis DSM 7454] gi|325848888|ref|ZP_08170398.1| 50S ribosomal protein L3 [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|212675702|gb|EEB35309.1| hypothetical protein ANHYDRO_01821 [Anaerococcus hydrogenalis DSM 7454] gi|325480532|gb|EGC83594.1| 50S ribosomal protein L3 [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 209 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 92/212 (43%), Positives = 127/212 (59%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+S + K+GMT V + +G PVTVL D +V ++ + +GY ++QVG + K KN Sbjct: 1 MKS-IFTTKVGMTQVIDEDGVVTPVTVLKADENVIVQVKSEEVDGYNSIQVGYYDKKEKN 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V KP+RG F N S K+ L E R+ + +L P G S F G+LVD+ + GKG Sbjct: 60 VKKPIRGHFDKANASYKRYLKEVRLSEKSELNP-GDTLSVDQFEEGELVDIVATSKGKGT 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR N+G A+HG S SHR G+ DP RVFK +K +G+MG RVTV+NL+VV Sbjct: 119 QGAIKRWNYGRGPASHG-SKSHRVAGARAAGSDPARVFKGRKGSGKMGNERVTVQNLKVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V+ + ILVKG VPG K + V+ + KS Sbjct: 178 KVNTEDSYILVKGAVPGP-KGGLVQVKQAIKS 208 >gi|86605866|ref|YP_474629.1| 50S ribosomal protein L3 [Synechococcus sp. JA-3-3Ab] gi|109893563|sp|Q2JV81|RL3_SYNJA RecName: Full=50S ribosomal protein L3 gi|86554408|gb|ABC99366.1| ribosomal protein L3 [Synechococcus sp. JA-3-3Ab] Length = 214 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 85/200 (42%), Positives = 123/200 (61%), Gaps = 3/200 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT +++ EG IPVTV+ C V +T +GY AVQ+G K+ Sbjct: 1 MALGILGRKVGMTQIFSPEGLAIPVTVVQAGPCTVTQIKTQATDGYNAVQLGYWPTAEKH 60 Query: 61 VSKPMRGFFSSVNVSPK-KKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +++ RG S V+ + L EFRV + + +G + F+ GQL+DV G +IG+G Sbjct: 61 LTRAQRGHLSKAGVTELLRHLREFRVDQPEAYQ-LGQKITVEIFSPGQLLDVAGTSIGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G KRH+FG +HG S +HR GS G PGRVF +MAGRMGG RVT++ L++ Sbjct: 120 FAGYQKRHHFGRGPMSHG-SKNHRRPGSVGAGTTPGRVFPGLRMAGRMGGCRVTIRKLQL 178 Query: 180 VSVDDKRGLILVKGCVPGAK 199 V VD +R L+++KG VPG + Sbjct: 179 VQVDPERNLLIIKGSVPGVE 198 >gi|121534759|ref|ZP_01666580.1| ribosomal protein L3 [Thermosinus carboxydivorans Nor1] gi|121306779|gb|EAX47700.1| ribosomal protein L3 [Thermosinus carboxydivorans Nor1] Length = 217 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 95/211 (45%), Positives = 132/211 (62%), Gaps = 5/211 (2%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +KLGMT ++ EG +PVTV+ +V +T++ +GY AVQ+G G K K V+KP Sbjct: 8 ILGKKLGMTQIFTAEGHLVPVTVVEAAPNVLVQRKTVETDGYNAVQLGFGAVKDKKVTKP 67 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M+G F+ V P + + E R+ + + VG F+ G+LVDVTG GKGF+G + Sbjct: 68 MKGHFAKAGVKPVRFIRELRLPSEPEFQ-VGQTIGVDIFSDGELVDVTGTGKGKGFAGGI 126 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQD--PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 KRHNF HG S SHR GS G R G+VFK KK+ GRMGG+RVTV+ L VV V Sbjct: 127 KRHNFKRGPMAHG-SKSHREPGSMGPRMSGGGGKVFKGKKLPGRMGGHRVTVQRLTVVRV 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D R L+L+KG +PGA K S ++V+++ K A Sbjct: 186 DKDRNLLLIKGAIPGA-KGSLVMVKNTVKPA 215 >gi|146298161|ref|YP_001192752.1| 50S ribosomal protein L3 [Flavobacterium johnsoniae UW101] gi|189042844|sp|A5FMY1|RL3_FLAJO RecName: Full=50S ribosomal protein L3 gi|146152579|gb|ABQ03433.1| 50S ribosomal protein L3 [Flavobacterium johnsoniae UW101] Length = 205 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 88/210 (41%), Positives = 128/210 (60%), Gaps = 12/210 (5%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G + K+ + Sbjct: 2 SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTNEVDGYEALQLGFDDKNEKHST 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFR----VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 K G F KKK+ EF+ QK DL+ V S F G+ VDV G++ GK Sbjct: 62 KAALGHFKKAGTVAKKKVVEFQDFATEQKLGDLIDV------SIFEEGEFVDVQGVSKGK 115 Query: 119 GFSGAMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 GF G +KRH FGG+ +ATHG R+ GS G P RVFK +MAGRMGG+ V V+NL Sbjct: 116 GFQGVVKRHGFGGVGQATHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGGDNVKVQNL 175 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVR 207 V+ V ++ L++VKGC+PG KNS+++++ Sbjct: 176 RVLKVVAEKNLLVVKGCIPG-HKNSYVIIQ 204 >gi|228474733|ref|ZP_04059464.1| 50S ribosomal protein L3 [Staphylococcus hominis SK119] gi|314935832|ref|ZP_07843184.1| 50S ribosomal protein L3 [Staphylococcus hominis subsp. hominis C80] gi|228271396|gb|EEK12764.1| 50S ribosomal protein L3 [Staphylococcus hominis SK119] gi|313656397|gb|EFS20137.1| 50S ribosomal protein L3 [Staphylococcus hominis subsp. hominis C80] Length = 220 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 93/219 (42%), Positives = 124/219 (56%), Gaps = 11/219 (5%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58 M G++ RK+GMT V+ G IPVTV+ + V+ +T + +GY A+QVG + + Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEANQNVVLQKKTEEVDGYNAIQVGFADKQAYK 60 Query: 59 ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 K +KP G +PK+ + EFR + D VG + F G ++DVT Sbjct: 61 KDAKSNKYANKPAEGHAKKAGAAPKRFIREFR-NVNVDEYEVGQEVTVDTFEAGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G + GKGF GA+KRH G HG S HR+ GS G D RVFK +KM GRMGGN V Sbjct: 120 GTSKGKGFQGAIKRHGQGRGPMAHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 TV+NLEVV VD +ILVKG VPG KK ++ ++ S K Sbjct: 179 TVQNLEVVQVDTDNNVILVKGNVPGPKK-GFVEIKSSIK 216 >gi|160902256|ref|YP_001567837.1| ribosomal protein L3 [Petrotoga mobilis SJ95] gi|189042855|sp|A9BHA5|RL3_PETMO RecName: Full=50S ribosomal protein L3 gi|160359900|gb|ABX31514.1| ribosomal protein L3 [Petrotoga mobilis SJ95] Length = 213 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 87/209 (41%), Positives = 127/209 (60%), Gaps = 4/209 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V+ + + IPVTV+ C VV +T++ +GY A+Q+G E + +K Sbjct: 3 GILGKKVGMTRVFK-DDKAIPVTVIKAGPCVVVQKKTVETDGYNAIQIGFEEIPERKANK 61 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V P + L EFRV+ DD +G + F+ G+ +D+ G + G+G+SG Sbjct: 62 PLMGHFKKAQVKPLRYLREFRVENVDDY-EIGQKIDVTIFSEGEKIDLIGNSKGRGYSGV 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR NF G THG S HR GSTG P +VFK KKM G+ G RVT++N EVV +D Sbjct: 121 MKRWNFRGGENTHG-SKFHRGLGSTGMATFPSKVFKGKKMPGQYGNERVTIQNSEVVYID 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + LI VKG VPGA + + +R++ K+ Sbjct: 180 VQNNLIAVKGGVPGA-RGGLVTIREAVKA 207 >gi|298531085|ref|ZP_07018486.1| 50S ribosomal protein L3 [Desulfonatronospira thiodismutans ASO3-1] gi|298509108|gb|EFI33013.1| 50S ribosomal protein L3 [Desulfonatronospira thiodismutans ASO3-1] Length = 210 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 84/202 (41%), Positives = 119/202 (58%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT V++ +G+ IPVTV+ C V+ + DK+GY A+Q+G ++K Sbjct: 6 GLIGKKLGMTSVFSDDGKFIPVTVIQAGPCPVIQKKDQDKDGYSAIQIGYDSMPGHKLNK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+RG + +KL EF + ++ P G + F G + +TG + GKGF+G Sbjct: 66 PVRGHQAKAGKGFFRKLTEFSPENVEEFEP-GQELNVEIFKPGDRIKLTGTSKGKGFAGV 124 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR NF GL THG HRS G+ G DPG+VFK KKM GRMG V+ KN E++SV Sbjct: 125 MKRWNFRGLPRTHGHEKVHRSPGAIGQCADPGKVFKGKKMPGRMGNKTVSYKNAEIISVR 184 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 + +ILVKG VPG + +L Sbjct: 185 TQDNVILVKGQVPGPRNGYVVL 206 >gi|300728443|ref|ZP_07061805.1| ribosomal protein L3 [Prevotella bryantii B14] gi|299774362|gb|EFI70992.1| ribosomal protein L3 [Prevotella bryantii B14] Length = 204 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 89/205 (43%), Positives = 127/205 (61%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G GEAK KN SK Sbjct: 3 GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKNTSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F +PKK L EF+ D+ L +G + F Q VDV G + GKGF G Sbjct: 63 PLMGTFKKAGTTPKKHLAEFKF---DEELNLGDTLTVEIFNDAQFVDVVGTSKGKGFQGV 119 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ ++THG R GS G P +VFK +M G+MGG+RVT +NL+V+ V Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLKVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + LILVKG V G ++ ++ + Sbjct: 180 IPEHNLILVKGSVAGCNGSTVLIEK 204 >gi|147676655|ref|YP_001210870.1| 50S ribosomal protein L3 [Pelotomaculum thermopropionicum SI] gi|189042854|sp|A5D5J0|RL3_PELTS RecName: Full=50S ribosomal protein L3 gi|146272752|dbj|BAF58501.1| ribosomal protein L3 [Pelotomaculum thermopropionicum SI] Length = 210 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 88/212 (41%), Positives = 125/212 (58%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G +PVTV+ C VV +T +K+GY A+Q+G G K ++ Sbjct: 1 MPKGLLGKKVGMTQIFTDTGLAVPVTVIEAGPCIVVQKKTPEKDGYSAIQLGFGAKKERS 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KPM G F + V P + L E RV+ + + VG F G+ VDV G T G+GF Sbjct: 61 FNKPMLGHFLAARVRPLRYLREVRVE-NPETYQVGQEIKADIFAPGEKVDVVGTTKGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH F HG S HR GS G + P RVFK +++ G +G RVTV+NLEVV Sbjct: 120 AGGIKRHGFHRGPMAHG-SKYHRRPGSLGAK-GPARVFKGRRLPGHLGMERVTVQNLEVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD R L+ VKG VPG K +L++ + K+ Sbjct: 178 KVDADRNLLAVKGAVPGP-KGGLVLIKQAAKA 208 >gi|298491398|ref|YP_003721575.1| 50S ribosomal protein L3 ['Nostoc azollae' 0708] gi|298233316|gb|ADI64452.1| 50S ribosomal protein L3 ['Nostoc azollae' 0708] Length = 211 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 81/197 (41%), Positives = 118/197 (59%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT +++ G IPVTV+ C V +T +GY A+QVG G K K Sbjct: 1 MSVGILGTKLGMTQIFDEAGVAIPVTVIQAGPCTVTQVKTKQTDGYCAIQVGYGVVKPKV 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P+ G + + + L E+R D +G F+ GQ+VDV G +IG+GF Sbjct: 61 LNRPLLGHLAKSSAPALRHLNEYRTDASGDYA-LGQELKADIFSAGQIVDVIGTSIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KR++FG +HG S +HR+ GS G PGRV+ K+MAGR+GG RVT++ L +V Sbjct: 120 AGNQKRNHFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGTRVTIRKLTIV 178 Query: 181 SVDDKRGLILVKGCVPG 197 +D R LIL+KG +PG Sbjct: 179 RLDADRNLILIKGAIPG 195 >gi|325689231|gb|EGD31237.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK115] Length = 208 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 131/212 (61%), Gaps = 6/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVIEAAPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVT++NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTIQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ +IL+KG VPGAKK S I ++ + K+ Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKA 206 >gi|299541932|ref|ZP_07052255.1| 50S ribosomal protein L3 [Lysinibacillus fusiformis ZC1] gi|298725670|gb|EFI66311.1| 50S ribosomal protein L3 [Lysinibacillus fusiformis ZC1] Length = 209 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 128/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+QVG + +VK Sbjct: 1 MAKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTVETDGYEAIQVGFEDKRVKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EFR + + VG F G ++DVTG+T GKGF Sbjct: 61 SNKPEQGHVAKANTAPKRFIREFR-NVNVEEYEVGQEVKVEIFAEGDVIDVTGVTKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFK KK+ G+MGGN VT++NLE+V Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKQKKLPGQMGGNVVTIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD R L+LVKG VPG+KK + + V+ + K+ Sbjct: 178 KVDTDRNLLLVKGNVPGSKK-ALVTVKTAIKA 208 >gi|254674251|emb|CBA10035.1| 50S ribosomal protein L3 [Neisseria meningitidis alpha275] Length = 196 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 90/193 (46%), Positives = 118/193 (61%), Gaps = 2/193 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + K L+V Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGTPKHCSK-LKV 179 Query: 180 VSVDDKRGLILVK 192 V VD +R L+ VK Sbjct: 180 VRVDAERQLLWVK 192 >gi|239905858|ref|YP_002952597.1| 50S ribosomal protein L3 [Desulfovibrio magneticus RS-1] gi|259647413|sp|C4XLX3|RL3_DESMR RecName: Full=50S ribosomal protein L3 gi|239795722|dbj|BAH74711.1| 50S ribosomal protein L3 [Desulfovibrio magneticus RS-1] Length = 210 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 90/206 (43%), Positives = 122/206 (59%), Gaps = 6/206 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT V+ +G IPVTV+ C V + L+K+GY A+Q+G E + V+K Sbjct: 6 GILGRKLGMTRVFGDDGSIIPVTVIQAGPCPVTQVKNLEKDGYNAMQIGFDEIPERKVNK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPV--GSVFSPSYFTVGQLVDVTGMTIGKGFS 121 P +G + L E R+ D +P G + F G++V VTG +IGKGF+ Sbjct: 66 PEKGHLDKAARGYFRVLKEIRL---DGPVPFEQGMDVTVDIFAPGEIVKVTGTSIGKGFA 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR NF GL+ THG +HRS GS G +PG+V K KKMAG MG VTV ++ VV Sbjct: 123 GVMKRWNFAGLKKTHGTEKAHRSGGSIGNNTEPGKVMKGKKMAGHMGARTVTVPSITVVD 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V + LILVKG +PG +N ++VR Sbjct: 183 VRPEMNLILVKGQIPGP-RNGVVVVR 207 >gi|33866599|ref|NP_898158.1| 50S ribosomal protein L3 [Synechococcus sp. WH 8102] gi|42559596|sp|Q7U4K0|RL3_SYNPX RecName: Full=50S ribosomal protein L3 gi|33633377|emb|CAE08582.1| 50S ribosomal protein L3 [Synechococcus sp. WH 8102] Length = 218 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 81/211 (38%), Positives = 127/211 (60%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ +GR +PVT++ C++ ++ D +GY AVQ+G G+ + K Sbjct: 1 MSIGILGKKLGMSQFFDEQGRAVPVTLIEAGPCRITQLKSSDTDGYAAVQIGFGDTREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + + + L E+RV D +G + F GQ VDV+G TIG+GF Sbjct: 61 INKPAKGHLNKTGETLLRHLREYRVDGLDG-FELGGSITVGDFEAGQKVDVSGDTIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRH F THG S +HR GS G PGR++ K+MAGR GG ++T + L ++ Sbjct: 120 SGYQKRHGFSRGPMTHG-SKNHREPGSIGPGTTPGRIYPGKRMAGRYGGKKITTRGLTIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L++VKG VPG K + + +R + + Sbjct: 179 KVDSERNLLVVKGSVPG-KPGALLNIRPALR 208 >gi|299830377|ref|YP_003734592.1| ribosomal protein L3 [Kryptoperidinium foliaceum] gi|297385079|gb|ADI40377.1| ribosomal protein L3 [Kryptoperidinium foliaceum] Length = 208 Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 83/206 (40%), Positives = 120/206 (58%), Gaps = 2/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT +++ G IPVT+L + C + +T K+GY A+QVG K+ Sbjct: 1 MSVGLLGNKIGMTQIFDETGNIIPVTILKVGPCTITQVKTEAKDGYNAIQVGYSNVSNKS 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G N+ P K L EFRV D + VG + F+ GQ V++ G TIGKGF Sbjct: 61 LTQPELGHLQKSNIQPLKYLKEFRVNSDHE-FEVGQSLTLDLFSSGQFVNIQGKTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRHNF THG S +HR+ GS G PGRV KKMAG++G TVK L+VV Sbjct: 120 AGLQKRHNFTRGPMTHG-SKNHRAPGSIGMGTTPGRVLPGKKMAGQLGNKITTVKKLKVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 ++ + ++++KG VPG N ++ Sbjct: 179 QLNLEENILVIKGSVPGKPGNLLTII 204 >gi|242278658|ref|YP_002990787.1| ribosomal protein L3 [Desulfovibrio salexigens DSM 2638] gi|259647407|sp|C6C185|RL3_DESAD RecName: Full=50S ribosomal protein L3 gi|242121552|gb|ACS79248.1| ribosomal protein L3 [Desulfovibrio salexigens DSM 2638] Length = 210 Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 87/206 (42%), Positives = 120/206 (58%), Gaps = 2/206 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT V+ +G +PVTVL + C V+ +T +K GY A+Q+G + V+K Sbjct: 6 GLLGKKLGMTRVFADDGSVVPVTVLEVGPCPVMQVKTEEKEGYNAIQIGYDALPERKVNK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G + L EF ++ D +G S F G+ V VTG + GKGF G Sbjct: 66 PAKGHQEKAGKGYFRHLREFPLESVADY-ELGQEISVDIFAAGEKVKVTGTSKGKGFQGV 124 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR NF G RA+HG HRS GS G PG+VFK KKM G+MG RVTV N+E+V V Sbjct: 125 MKRWNFAGSRASHGAEKVHRSPGSIGHATFPGKVFKGKKMPGQMGNERVTVSNIEIVDVR 184 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDS 209 +++VKG VPG KN +++R + Sbjct: 185 ADENVLVVKGQVPGP-KNGLVMIRKT 209 >gi|296126865|ref|YP_003634117.1| 50S ribosomal protein L3 [Brachyspira murdochii DSM 12563] gi|296018681|gb|ADG71918.1| 50S ribosomal protein L3 [Brachyspira murdochii DSM 12563] Length = 217 Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 80/195 (41%), Positives = 113/195 (57%), Gaps = 2/195 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT V++ G I VTV+ C V+ R +K+GY A+Q+G G K K++ K Sbjct: 3 GIIGKKLGMTTVFDETGNAIAVTVVEAGPCTVMQIRDNEKDGYSAIQLGYGAVKEKHLKK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F N+ PKK L EFR+ VG F G +DV+ ++ G+GF+G Sbjct: 63 PQIGQFKKANLEPKKYLKEFRMDNTSSYT-VGQELKADVFQAGDFIDVSSLSKGRGFAGV 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHN+ G +HG + R+ GS GC P RV+K K M G MG T++NL+VV + Sbjct: 122 MKRHNYDGGPMSHGSNFRRRA-GSIGCNSYPARVWKGKGMPGHMGNALTTIQNLKVVEIR 180 Query: 184 DKRGLILVKGCVPGA 198 LI++KG +PGA Sbjct: 181 PDDNLIMIKGAIPGA 195 >gi|255690003|ref|ZP_05413678.1| 50S ribosomal protein L3 [Bacteroides finegoldii DSM 17565] gi|260624611|gb|EEX47482.1| 50S ribosomal protein L3 [Bacteroides finegoldii DSM 17565] Length = 205 Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 83/205 (40%), Positives = 125/205 (60%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYEAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PK+ L EF+ + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKRHLAEFKEFETE--LNLGDTVTVEMFNDANFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 L+LVKG +PG K S +L+ Sbjct: 181 IADHNLLLVKGSIPGC-KGSIVLIE 204 >gi|150025407|ref|YP_001296233.1| 50S ribosomal protein L3 [Flavobacterium psychrophilum JIP02/86] gi|166233142|sp|A6GZ99|RL3_FLAPJ RecName: Full=50S ribosomal protein L3 gi|149771948|emb|CAL43422.1| 50S ribosomal protein L3 [Flavobacterium psychrophilum JIP02/86] Length = 205 Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 84/206 (40%), Positives = 126/206 (61%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ RK+GMT +++ G+ IP TV+ C V RT+ +GY A+Q+G + K+ + Sbjct: 2 SGLIGRKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTIGVDGYEALQLGFDDKNEKHST 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F KKK+ EF+ + L G V S F+ G+ VD+ G++ GKGF G Sbjct: 62 KADLGHFKKAGTVAKKKVVEFQDFVSEHKL--GDVISVDLFSEGEFVDIQGVSKGKGFQG 119 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG+ +ATHG R+ GS G P RVFK +MAGRMGG+ V V+NL V+ Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGGDNVKVQNLRVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L+++KGC+PG NS+++++ Sbjct: 180 VVAEKNLLVIKGCIPGC-NNSYVIIQ 204 >gi|169830030|ref|YP_001700188.1| 50S ribosomal protein L3 [Lysinibacillus sphaericus C3-41] gi|226730531|sp|B1HMY0|RL3_LYSSC RecName: Full=50S ribosomal protein L3 gi|168994518|gb|ACA42058.1| 50S ribosomal protein L3 [Lysinibacillus sphaericus C3-41] Length = 209 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 128/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+QVG + +VK Sbjct: 1 MAKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTVETDGYEAIQVGFEDKRVKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EFR + + VG F G ++DVTG+T GKGF Sbjct: 61 SNKPQQGHVAKANTAPKRFIREFR-NVNVEEYEVGQEVKVEIFAEGDVIDVTGVTKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFK KK+ G+MGGN VT++NLE+V Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKQKKLPGQMGGNVVTIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD R L+LVKG VPG+KK + + V+ + K+ Sbjct: 178 KVDTDRNLLLVKGNVPGSKK-ALVTVKTASKA 208 >gi|125716985|ref|YP_001034118.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK36] gi|323350940|ref|ZP_08086598.1| 50S ribosomal protein L3 [Streptococcus sanguinis VMC66] gi|166234600|sp|A3CK63|RL3_STRSV RecName: Full=50S ribosomal protein L3 gi|125496902|gb|ABN43568.1| 50S ribosomal protein L3, putative [Streptococcus sanguinis SK36] gi|322122922|gb|EFX94628.1| 50S ribosomal protein L3 [Streptococcus sanguinis VMC66] gi|324990002|gb|EGC21943.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK353] gi|324991815|gb|EGC23740.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK405] gi|324996295|gb|EGC28203.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK678] gi|325686405|gb|EGD28435.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK72] gi|325695810|gb|EGD37707.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK150] gi|325697976|gb|EGD39859.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK160] gi|327458431|gb|EGF04787.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK1] gi|327463723|gb|EGF10039.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK1057] gi|327467335|gb|EGF12835.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK330] gi|327471742|gb|EGF17183.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK408] gi|327490463|gb|EGF22245.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK1058] gi|328945217|gb|EGG39371.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK1087] Length = 208 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 131/212 (61%), Gaps = 6/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVVEAAPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVT++NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTIQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ +IL+KG VPGAKK S I ++ + K+ Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKA 206 >gi|57867723|ref|YP_189394.1| 50S ribosomal protein L3 [Staphylococcus epidermidis RP62A] gi|81819347|sp|Q5HLZ9|RL3_STAEQ RecName: Full=50S ribosomal protein L3 gi|57638381|gb|AAW55169.1| ribosomal protein L3 [Staphylococcus epidermidis RP62A] Length = 220 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 92/208 (44%), Positives = 119/208 (57%), Gaps = 10/208 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60 Query: 53 AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 G K +KP G + +PK+ + EFR + D VG S F G ++DVT Sbjct: 61 KGSKSNKYANKPAEGHAKKADTAPKRFIREFR-NLNVDEYEVGQEVSVDTFETGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH G HG S HR+ GS G D +VFK +KM GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQGRGPMAHG-SHFHRAPGSVGMASDASKVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKK 200 TV+NLEVV VD + +ILVKG VPG KK Sbjct: 179 TVQNLEVVQVDTENSVILVKGNVPGPKK 206 >gi|251812047|ref|ZP_04826520.1| 50S ribosomal protein L3 [Staphylococcus epidermidis BCM-HMP0060] gi|282875342|ref|ZP_06284215.1| 50S ribosomal protein L3 [Staphylococcus epidermidis SK135] gi|293368433|ref|ZP_06615057.1| 50S ribosomal protein L3 [Staphylococcus epidermidis M23864:W2(grey)] gi|251804381|gb|EES57038.1| 50S ribosomal protein L3 [Staphylococcus epidermidis BCM-HMP0060] gi|281296107|gb|EFA88628.1| 50S ribosomal protein L3 [Staphylococcus epidermidis SK135] gi|291317391|gb|EFE57813.1| 50S ribosomal protein L3 [Staphylococcus epidermidis M23864:W2(grey)] gi|329731174|gb|EGG67544.1| 50S ribosomal protein L3 [Staphylococcus epidermidis VCU144] gi|329736435|gb|EGG72703.1| 50S ribosomal protein L3 [Staphylococcus epidermidis VCU028] gi|329736982|gb|EGG73237.1| 50S ribosomal protein L3 [Staphylococcus epidermidis VCU045] Length = 220 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 92/208 (44%), Positives = 119/208 (57%), Gaps = 10/208 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60 Query: 53 AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 G K +KP G + +PK+ + EFR + D VG S F G ++DVT Sbjct: 61 KGSKSNKYANKPAEGHAKKADTAPKRFIREFR-NVNVDEYEVGQEVSVDTFETGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH G HG S HR+ GS G D +VFK +KM GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQGRGPMAHG-SHFHRAPGSVGMASDASKVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKK 200 TV+NLEVV VD + +ILVKG VPG KK Sbjct: 179 TVQNLEVVQVDTENSVILVKGNVPGPKK 206 >gi|308235496|ref|ZP_07666233.1| 50S ribosomal protein L3 [Gardnerella vaginalis ATCC 14018] gi|311115167|ref|YP_003986388.1| 50S ribosomal protein L3 [Gardnerella vaginalis ATCC 14019] gi|310946661|gb|ADP39365.1| 50S ribosomal protein L3 [Gardnerella vaginalis ATCC 14019] Length = 216 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 84/212 (39%), Positives = 121/212 (57%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+ ++ RKLGM+ V++ G +PVT++ + V +T + +GY AVQ+G G+ V Sbjct: 7 RTALLGRKLGMSQVWDENGLFVPVTLVEVATNVVTAVKTEETDGYCAVQLGYGQIDPTKV 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G F+ V+P++ L E R + D P G + F G VDVTG T GKGF+ Sbjct: 67 TKPLAGHFAKAGVTPRRHLAEVRTENAADYKP-GQELTAEVFAEGAEVDVTGTTKGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F R THG + R GS G P R+ K K+MAGRMG T NL +VS Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTSTALNLTIVS 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + G++ +KG +PG K + +LVR + K A Sbjct: 186 SDVENGILAIKGAIPG-PKGAIVLVRSAVKGA 216 >gi|260893372|ref|YP_003239469.1| 50S ribosomal protein L3 [Ammonifex degensii KC4] gi|260865513|gb|ACX52619.1| 50S ribosomal protein L3 [Ammonifex degensii KC4] Length = 209 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 4/209 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT + G + VTV+ C VV + + +GY A+QVG E V+K Sbjct: 3 GILGKKLGMTQYFTPAGEAMAVTVIKAGPCVVVQTKNRETDGYEAIQVGFEEIPEHRVNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+RG F+ + P + L EFRV D VG F+ G+ VDVTG++ GKGF+G Sbjct: 63 PLRGHFARAGLKPLRYLREFRV-PDASAYTVGQEIKVDIFSPGEKVDVTGISKGKGFAGG 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KRH F +HG S HR GS G + P RVFK +K+ G MG RVTV+NLEVV VD Sbjct: 122 IKRHGFSRGPMSHG-SKYHRRPGSLGAK-GPARVFKGRKLPGHMGMERVTVQNLEVVKVD 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L++VKG VPG + ++++ + K+ Sbjct: 180 PERNLLVVKGAVPGP-RGGLLIIKQAVKA 207 >gi|153805957|ref|ZP_01958625.1| hypothetical protein BACCAC_00202 [Bacteroides caccae ATCC 43185] gi|149130634|gb|EDM21840.1| hypothetical protein BACCAC_00202 [Bacteroides caccae ATCC 43185] Length = 205 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 82/205 (40%), Positives = 125/205 (60%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PK+ L EF+ + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKRAGVTPKRHLAEFKEFETE--LNLGDTVTVELFNDANFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 L+L+KG +PG K S +L+ Sbjct: 181 IADHNLLLIKGSIPGC-KGSIVLIE 204 >gi|299065415|emb|CBJ36584.1| 50S ribosomal subunit protein L3 [Ralstonia solanacearum CMR15] Length = 209 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 86/202 (42%), Positives = 120/202 (59%), Gaps = 2/202 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V+ +G IPVTVL + +V +T + +GY AVQV G + V+KP+ G + Sbjct: 1 MTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGTRRASRVTKPLAGHLAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130 V + + EFR+ L +G F+VGQ +DV G TIGKG++G +KR++F Sbjct: 61 AGVEAGEIIVEFRIDATKAAELKLGDTIDVDLFSVGQKIDVQGTTIGKGYAGTIKRYHFS 120 Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190 RA+HG S SH GS G QDPGRVF K+M G MG TV+NL +V VD +R L+ Sbjct: 121 SGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVIVRVDAERKLLF 180 Query: 191 VKGCVPGAKKNSWILVRDSFKS 212 VKG VPGA K+ +++V + K+ Sbjct: 181 VKGAVPGA-KSGFVVVSPAVKA 201 >gi|239636233|ref|ZP_04677237.1| 50S ribosomal protein L3 [Staphylococcus warneri L37603] gi|239598249|gb|EEQ80742.1| 50S ribosomal protein L3 [Staphylococcus warneri L37603] gi|330685188|gb|EGG96852.1| 50S ribosomal protein L3 [Staphylococcus epidermidis VCU121] Length = 223 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 95/220 (43%), Positives = 124/220 (56%), Gaps = 11/220 (5%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG + K Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEAGQNVVLQKKTEEVDGYNAIQVGFEDKKAYK 60 Query: 59 ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 K +KP G + +PK+ + EFR + D VG S F G ++DVT Sbjct: 61 KGSKTNKYANKPAEGHAKKADTAPKRFIREFR-NVNVDEYEVGQEVSVDTFETGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH HG S HR+ GS G D RVFK +KM GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMAHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 TV+NLEVV VD + +ILVKG VPG KK + + S KS Sbjct: 179 TVQNLEVVQVDTENSVILVKGNVPGPKK-GLVEISTSIKS 217 >gi|254527207|ref|ZP_05139259.1| ribosomal protein L3 [Prochlorococcus marinus str. MIT 9202] gi|221538631|gb|EEE41084.1| ribosomal protein L3 [Prochlorococcus marinus str. MIT 9202] Length = 217 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 79/197 (40%), Positives = 124/197 (62%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +G +PVT++ C+V +T +GY A+Q+G G +K K+ Sbjct: 1 MSIGILGKKLGMSQLFDDKGNAVPVTLIEAGPCRVTQLKTNALDGYTAIQIGYGVSKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SKP +G K L E+RV++ +G+ + F VGQ VD++G ++G+GF Sbjct: 61 ISKPEKGHLLKSGEELLKHLKEYRVEETSSY-EIGNQITVKNFEVGQKVDISGKSMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRH F +HG S +HR+ GSTG PGR++ K+MAGR GG ++T K L V+ Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVL 178 Query: 181 SVDDKRGLILVKGCVPG 197 +DD++ L++VKG VPG Sbjct: 179 KIDDQKNLLVVKGSVPG 195 >gi|11465780|ref|NP_053924.1| ribosomal protein L3 [Porphyra purpurea] gi|1710474|sp|P51314|RK3_PORPU RecName: Full=50S ribosomal protein L3, chloroplastic gi|1276780|gb|AAC08200.1| 50S ribosomal protein L3 [Porphyra purpurea] Length = 205 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 82/199 (41%), Positives = 121/199 (60%), Gaps = 2/199 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT ++ G IPVTV+ + C + +++ +GY A+QVG + + Sbjct: 1 MSVGILGTKVGMTQFFDETGLSIPVTVIQVGPCVITQIKSMSTDGYNAIQVGYKQVVEQK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SKP+ G P K L E+ V+ +D V VFS + F VGQ V+V+ +IGKGF Sbjct: 61 LSKPLLGHLKKSQSPPLKYLREYLVESIEDF-EVSQVFSTNIFEVGQKVNVSSKSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRH+F +HG S +HR GS G PGRV+ K MAG+MG +VT+KNL++V Sbjct: 120 SGYQKRHHFSRGPMSHG-SKNHRQPGSIGAGTTPGRVYPGKNMAGQMGNKKVTIKNLQIV 178 Query: 181 SVDDKRGLILVKGCVPGAK 199 S++ + L+L+KG VPG + Sbjct: 179 SINIENDLLLLKGAVPGKQ 197 >gi|28493521|ref|NP_787682.1| 50S ribosomal protein L3 [Tropheryma whipplei str. Twist] gi|28572367|ref|NP_789147.1| 50S ribosomal protein L3 [Tropheryma whipplei TW08/27] gi|42559617|sp|Q83FY6|RL3_TROWT RecName: Full=50S ribosomal protein L3 gi|42559618|sp|Q83I78|RL3_TROW8 RecName: Full=50S ribosomal protein L3 gi|28410498|emb|CAD66884.1| 50S ribosomal protein L3 [Tropheryma whipplei TW08/27] gi|28476563|gb|AAO44651.1| 50S ribosomal protein L3 [Tropheryma whipplei str. Twist] Length = 210 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 85/212 (40%), Positives = 124/212 (58%), Gaps = 9/212 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVK 59 M ++ K+GMT +++ GRR+ VV + +K+GY +Q+ G + Sbjct: 1 MARALLGTKVGMTQIWS--GRRVVPVTAVAVTTNVVSQVKAPEKDGYSRLQIATGAIDPR 58 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V++P +G F+ ++P++ + E D +G F P F GQLVDV G + GKG Sbjct: 59 RVNRPRKGHFAKAGLTPRRFIREV-----DSEGSLGDEFGPEIFQEGQLVDVVGKSKGKG 113 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG MKRHNF G+ ATHG +HR GS G P RVFK +MAGR+G +RVTV NL + Sbjct: 114 FSGTMKRHNFQGVSATHGSHRNHRKPGSVGASSTPSRVFKGTRMAGRLGSSRVTVHNLRL 173 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V +D + GL+LV+G VPG+ S +++RD+ K Sbjct: 174 VKIDSENGLLLVEGAVPGS-SGSPVIIRDAVK 204 >gi|157414163|ref|YP_001485029.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9215] gi|166990938|sp|A8G762|RL3_PROM2 RecName: Full=50S ribosomal protein L3 gi|157388738|gb|ABV51443.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9215] Length = 217 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 79/197 (40%), Positives = 124/197 (62%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +G +PVT++ C+V +T +GY A+Q+G G +K K+ Sbjct: 1 MSIGILGKKLGMSQLFDDKGNAVPVTLIEAGPCRVTQLKTNALDGYTAIQIGYGVSKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SKP +G K L E+RV++ +G+ + F VGQ VD++G ++G+GF Sbjct: 61 ISKPEKGHLLKSGEELLKHLKEYRVEETSSY-EIGNQITVKNFEVGQKVDISGKSMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRH F +HG S +HR+ GSTG PGR++ K+MAGR GG ++T K L V+ Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVL 178 Query: 181 SVDDKRGLILVKGCVPG 197 +DD++ L++VKG VPG Sbjct: 179 KIDDQKNLLVVKGSVPG 195 >gi|118411190|ref|YP_874584.1| 50S ribosomal protein L3 [Thalassiosira pseudonana] gi|125987628|sp|A0T0X2|RK3_THAPS RecName: Full=50S ribosomal protein L3, chloroplastic gi|116739937|gb|ABK20807.1| 50S ribosomal protein L3 [Thalassiosira pseudonana] Length = 207 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 82/206 (39%), Positives = 118/206 (57%), Gaps = 2/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT +++ G IPVT+L + C + +T +GY A+QVG G K Sbjct: 1 MSLGLLGNKIGMTQIFDESGNIIPVTILKVGPCVITQVKTTLNDGYNAIQVGYGNVSTKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G N+ P K L EF V D VG + + F GQL++VTG +IGKGF Sbjct: 61 LTQPQLGHLQKSNIQPLKYLKEFHV-SDPTEFNVGQILNVESFVAGQLINVTGKSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KR+NF THG S +HR+ GS G PGRV KKMAG++G +K L++V Sbjct: 120 SGLQKRYNFARGPMTHG-SKNHRAPGSIGMGTSPGRVLPGKKMAGQLGNKTANIKKLKIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 V++ +++VKG VPG N ++ Sbjct: 179 QVNNDENILVVKGAVPGKPGNLLSII 204 >gi|126697087|ref|YP_001091973.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9301] gi|166233175|sp|A3PF47|RL3_PROM0 RecName: Full=50S ribosomal protein L3 gi|126544130|gb|ABO18372.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9301] Length = 217 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 78/197 (39%), Positives = 124/197 (62%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +G +PVT++ C++ +T +GY AVQ+G G +K K+ Sbjct: 1 MSIGILGKKLGMSQLFDEKGNSVPVTLIEAGPCRITQLKTTALDGYTAVQIGYGLSKDKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SKP +G K L E+RV++ +G+ + F VGQ VD++G ++G+GF Sbjct: 61 ISKPEKGHLLKSGEELLKHLKEYRVEETSSY-EIGNQITVKNFEVGQKVDISGKSMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F +HG S +HR+ GSTG PGR++ K+MAGR GG ++T K L V+ Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVL 178 Query: 181 SVDDKRGLILVKGCVPG 197 +DD++ L++VKG VPG Sbjct: 179 KIDDQKNLLVVKGSVPG 195 >gi|323483301|ref|ZP_08088691.1| 50S ribosomal protein L3 [Clostridium symbiosum WAL-14163] gi|323691201|ref|ZP_08105477.1| 50S ribosomal protein L3 [Clostridium symbiosum WAL-14673] gi|323403399|gb|EGA95707.1| 50S ribosomal protein L3 [Clostridium symbiosum WAL-14163] gi|323504720|gb|EGB20506.1| 50S ribosomal protein L3 [Clostridium symbiosum WAL-14673] Length = 211 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 125/212 (58%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G PVTVL C V +T++ +GY AVQVG + + K Sbjct: 1 MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTVENDGYKAVQVGFVDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F V+ K+ + EFR + ++ V F G +DVT ++ GKGF Sbjct: 61 VTKPVKGHFDKAGVAYKRFVREFRFENAEEY-SVKDEIKAEIFAAGDKIDVTAVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR+ HG S HR GS G PGRVFK K M G MG +VT++NLEVV Sbjct: 120 QGAIKRYGQHRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGHMGSVKVTIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD LILVKG VPG KK S + V+++ K+ Sbjct: 179 RVDADSNLILVKGAVPGPKK-SLVTVKETVKA 209 >gi|242243947|ref|ZP_04798390.1| 50S ribosomal protein L3 [Staphylococcus epidermidis W23144] gi|242232580|gb|EES34892.1| 50S ribosomal protein L3 [Staphylococcus epidermidis W23144] gi|319400623|gb|EFV88848.1| 50S ribosomal protein L3 [Staphylococcus epidermidis FRI909] Length = 220 Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 91/208 (43%), Positives = 119/208 (57%), Gaps = 10/208 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60 Query: 53 AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 G K +KP G + +PK+ + EFR + D VG S F G ++DVT Sbjct: 61 KGSKSNKYANKPAEGHAKKADTAPKRFIREFR-NVNVDEYEVGQEVSVDTFETGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH G HG S HR+ GS G D +VFK +KM GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQGRGPMAHG-SHFHRAPGSVGMASDASKVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKK 200 TV+NLEVV +D + +ILVKG VPG KK Sbjct: 179 TVQNLEVVQIDTENSVILVKGNVPGPKK 206 >gi|311029049|ref|ZP_07707139.1| 50S ribosomal protein L3 [Bacillus sp. m3-13] Length = 206 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 127/212 (59%), Gaps = 7/212 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+Q+G + + K Sbjct: 1 MTKGILGRKVGMTQVFAENGDLIPVTVIEATPNVVLQVKTVETDGYEAIQIGFADKRDKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP++G + N +PK+ + E L VG F G +VDVTG++ GKGF Sbjct: 61 ANKPLKGHVAKANTAPKRFIREISGAN----LEVGQEVKVDIFAEGDVVDVTGISKGKGF 116 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G++KRHN THG S HR GS G P RVFK K + GRMGG R+T++NLE+V Sbjct: 117 QGSIKRHNQSRGPMTHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGERITIQNLEIV 174 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPG KK S I ++ + K+ Sbjct: 175 KVDAERNLLLVKGNVPGPKK-SLITIKSAIKA 205 >gi|194477058|ref|YP_002049237.1| 50S ribosomal protein L3 [Paulinella chromatophora] gi|212288241|sp|B1X508|RK3_PAUCH RecName: Full=50S ribosomal protein L3, organellar chromatophore gi|171192065|gb|ACB43027.1| 50S ribosomal protein L3 [Paulinella chromatophora] Length = 218 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 81/197 (41%), Positives = 121/197 (61%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ EG+ +PVT++ C++ +++D +GY AVQ+G GE + K Sbjct: 1 MSIGILGKKLGMSQFFDEEGKAVPVTLIEAGPCRITQLKSIDTDGYTAVQLGYGETRQKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G + L E+RV+ D L +G+ + F GQ VDV+G ++G+GF Sbjct: 61 VNKPSKGHLARSGEQLLSHLREYRVETIDG-LKLGNSITVEDFKAGQKVDVSGDSMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRH F THG S +HR GSTG PGR++ K+MAGR GG ++T + L +V Sbjct: 120 SGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKQITTRGLVIV 178 Query: 181 SVDDKRGLILVKGCVPG 197 VD L++VKG VPG Sbjct: 179 KVDTGHNLLVVKGSVPG 195 >gi|163791666|ref|ZP_02186061.1| 50S ribosomal protein L3 [Carnobacterium sp. AT7] gi|159873045|gb|EDP67154.1| 50S ribosomal protein L3 [Carnobacterium sp. AT7] Length = 210 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 93/216 (43%), Positives = 130/216 (60%), Gaps = 10/216 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ G IPVTV+ V+ +T++ +GY AVQ+G E + Sbjct: 1 MTKGILGKKVGMTQVFTESGELIPVTVIEATPNVVLQVKTMETDGYEAVQLGYQEKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLL---PVGSVFSPSYFTVGQLVDVTGMTIG 117 +KP G + N +PK+ + EF +D +L VG F VG +V+VTG T G Sbjct: 61 SNKPAMGHVAKANATPKRFIREF----NDVVLGEYEVGQEVKVDTFAVGDIVNVTGTTKG 116 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF G +KRH +HG S HR GS G DP RVFK + GRMGGNRVT+KNL Sbjct: 117 KGFQGVIKRHGHSRGPMSHG-SRHHRRPGSMGP-VDPNRVFKRTLLPGRMGGNRVTIKNL 174 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 E+VSVD ++ ++L+KG VPG+KK S I ++ +F+ A Sbjct: 175 EIVSVDVEKNVLLIKGNVPGSKK-SLIQIKSAFQKA 209 >gi|112791754|gb|ABI22152.1| ribosomal protein L3 [Flavobacterium hibernum] Length = 205 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 88/210 (41%), Positives = 127/210 (60%), Gaps = 12/210 (5%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C V RT +GY A+Q+G + K+ + Sbjct: 2 SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTKGVDGYEALQLGFDDKNEKHST 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFR----VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 K G F KKK+ EF+ QK DL+ V S F G+ VDV G++ GK Sbjct: 62 KAALGHFKKAGTVAKKKVVEFQDFATEQKLGDLIDV------SIFAEGEFVDVQGVSKGK 115 Query: 119 GFSGAMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 GF G +KRH FGG+ +ATHG R+ GS G P RVFK +MAGRMGG+ V V+NL Sbjct: 116 GFQGVVKRHGFGGVGQATHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGGDNVKVQNL 175 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVR 207 V+ V ++ L+++KGCVPG KNS+++++ Sbjct: 176 RVLKVVAEKNLLVIKGCVPG-HKNSYVIIQ 204 >gi|260435636|ref|ZP_05789606.1| 50S ribosomal protein L3 [Synechococcus sp. WH 8109] gi|260413510|gb|EEX06806.1| 50S ribosomal protein L3 [Synechococcus sp. WH 8109] Length = 229 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ +GR +PVT++ C++ + D +GY AVQ+G GE + K Sbjct: 12 MSIGILGKKLGMSQFFDEQGRAVPVTLIEAGPCRITQLKNDDTDGYSAVQIGFGETREKL 71 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + + L E+RV + L +G + F GQ VDV+G T+G+GF Sbjct: 72 INKPAQGHLNKSGEGLLRHLREYRVDSVEGL-EIGGAITVGDFEAGQKVDVSGDTVGRGF 130 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F THG S +HR GSTG PGR++ K+MAGR GG ++T + L ++ Sbjct: 131 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLTIL 189 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + L++VKG VPG K + + +R + + Sbjct: 190 KVDSEHNLLVVKGSVPG-KPGALLNIRPALR 219 >gi|167752385|ref|ZP_02424512.1| hypothetical protein ALIPUT_00629 [Alistipes putredinis DSM 17216] gi|167660626|gb|EDS04756.1| hypothetical protein ALIPUT_00629 [Alistipes putredinis DSM 17216] Length = 204 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 83/198 (41%), Positives = 117/198 (59%), Gaps = 4/198 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT VY+ EG+ IP TV+ C V RT++K+ Y AVQ+ + K+ + Sbjct: 2 SGLIGKKIGMTSVYSAEGKNIPCTVIEAGPCVVTQIRTVEKDSYEAVQIAYDDKSEKHTT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 + G F +PK+K+ EF KD + +G + F+ VDVTG++ GKGF G Sbjct: 62 GSLLGHFKKAGTTPKRKMAEF---KDMPEVNLGDTLTVDMFSEEDWVDVTGISKGKGFQG 118 Query: 123 AMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG+ THG R GS G P RVF K++ GRMGG +V V NL+V+ Sbjct: 119 VVKRHGFGGVGGQTHGQHNRQRKPGSLGASSYPSRVFPGKRLPGRMGGEQVKVLNLKVLK 178 Query: 182 VDDKRGLILVKGCVPGAK 199 + + LILVKG +PGAK Sbjct: 179 IIPENNLILVKGSIPGAK 196 >gi|124023995|ref|YP_001018302.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9303] gi|166233177|sp|A2CC27|RL3_PROM3 RecName: Full=50S ribosomal protein L3 gi|123964281|gb|ABM79037.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9303] Length = 218 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 83/209 (39%), Positives = 127/209 (60%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ +GR IPVT++ C++ +T D +GY AVQ+G G+ + K Sbjct: 1 MSIGILGKKLGMSQFFDDQGRAIPVTLIEAGPCRITQLKTSDIDGYAAVQIGFGDTREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + K L E+RV+ + L +G+ + F GQ VDV+G T+G+GF Sbjct: 61 INKPSKGHLTKSGEVLLKHLREYRVEGLEG-LELGAAITVGSFEAGQKVDVSGDTMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRH F +HG S +HR GSTG PGR++ K+MAGR GG + T + L ++ Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKRTTRGLTIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VD R L++VKG VPG K + + +R + Sbjct: 179 KVDSNRNLLVVKGSVPG-KPGALLNIRPA 206 >gi|320335523|ref|YP_004172234.1| 50S ribosomal protein L3 [Deinococcus maricopensis DSM 21211] gi|319756812|gb|ADV68569.1| 50S ribosomal protein L3 [Deinococcus maricopensis DSM 21211] Length = 206 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 88/195 (45%), Positives = 113/195 (57%), Gaps = 6/195 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ K+GMT V+ + + IPVTV+ C VV +T +GY AVQVG K +++ Sbjct: 3 GILGTKVGMTQVWK-DDKVIPVTVVLAGPCPVVQRKTTATDGYEAVQVGFMPKNEKRINR 61 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G VS + L EFR + P G + F G+ +D TG + GKG G Sbjct: 62 PLMGHLKKAGVSGVRYLREFR-----NFTPEGDTITVDIFGAGEKIDATGTSKGKGTQGV 116 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR NF G A+HG HR GS G R+ PGRV+K K+MAGRMG RVTV+NLEVV V Sbjct: 117 MKRWNFKGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGRMGNERVTVQNLEVVEVR 176 Query: 184 DKRGLILVKGCVPGA 198 LILVKG +PGA Sbjct: 177 AGENLILVKGAIPGA 191 >gi|325663062|ref|ZP_08151512.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 4_1_37FAA] gi|331086669|ref|ZP_08335746.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325470516|gb|EGC73746.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 4_1_37FAA] gi|330409835|gb|EGG89270.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 226 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 92/228 (40%), Positives = 126/228 (55%), Gaps = 19/228 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G PVTVL C V +T++ +GY AVQVG + K K Sbjct: 1 MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQIKTVENDGYSAVQVGFVDKKDKI 60 Query: 61 V----------------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V +K +G F VS K+ + EF+ + D+ + F Sbjct: 61 VNVDKNGKKTIVHRHGTTKAEKGHFDKAGVSSKRFVREFKFENADEF-ELAQEIKADIFA 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G VD T ++ GKGF GA+KRHN THG S HR GS G DP +VFK KKM Sbjct: 120 AGDKVDATAISKGKGFQGAIKRHNQHRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G MG R+T++NLE+V VD + LILVKG VPG KK S + +++S K+ Sbjct: 179 GHMGSKRITIQNLEIVRVDAENNLILVKGSVPGPKK-SLVTIKESVKA 225 >gi|242371896|ref|ZP_04817470.1| 50S ribosomal protein L3 [Staphylococcus epidermidis M23864:W1] gi|242350403|gb|EES42004.1| 50S ribosomal protein L3 [Staphylococcus epidermidis M23864:W1] Length = 220 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 92/208 (44%), Positives = 118/208 (56%), Gaps = 10/208 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60 Query: 53 AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 G K +KP G + +PK+ + EFR + D VG S F G ++DVT Sbjct: 61 KGSKSNKYANKPAEGHAKKADTAPKRFIREFR-NVNVDEYEVGQEVSVDTFETGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH HG S HR+ GS G D RVFK +KM GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMAHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKK 200 TV+NLEVV VD + +ILVKG VPG KK Sbjct: 179 TVQNLEVVQVDTENSVILVKGNVPGPKK 206 >gi|242624269|ref|YP_003002187.1| 50S ribosomal protein L3 [Aureoumbra lagunensis] gi|239997377|gb|ACS36899.1| 50S ribosomal protein L3 [Aureoumbra lagunensis] Length = 208 Score = 152 bits (383), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 85/201 (42%), Positives = 118/201 (58%), Gaps = 2/201 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT + + G +PVT+L C V +T++ +GY AVQVG + K Sbjct: 1 MPLGLLGNKIGMTQIVDERGNMVPVTILRAGPCIVTQIKTVEVDGYEAVQVGYNQVSSKF 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP G V V + L E+R+ + + +G S F G LVD+TG TIGKGF Sbjct: 61 LTKPQIGHLEKVGVPLLRYLHEYRIDSTEQVT-LGQTISVDMFKSGDLVDITGKTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRHNFG THG S +HR+ GS G PGRV+ KKMAG +G +VT+K L+++ Sbjct: 120 AGLQKRHNFGRGPMTHG-SKNHRAPGSIGAGTTPGRVYPGKKMAGHLGAKKVTIKKLKIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKN 201 VD + LI+V G VPG N Sbjct: 179 FVDAENNLIVVLGSVPGKSGN 199 >gi|123969297|ref|YP_001010155.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. AS9601] gi|166233179|sp|A2BTD7|RL3_PROMS RecName: Full=50S ribosomal protein L3 gi|123199407|gb|ABM71048.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. AS9601] Length = 217 Score = 152 bits (383), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 79/197 (40%), Positives = 123/197 (62%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +G +PVT++ C+V +T +GY AVQ+G G +K K+ Sbjct: 1 MSIGILGKKLGMSQLFDDKGNSVPVTLIEAGPCRVTQLKTTALDGYTAVQIGYGLSKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SKP +G K L E+RV++ +G + F VGQ VD++G ++G+GF Sbjct: 61 LSKPEKGHLLKSGEELLKHLKEYRVEETSSY-EIGKQITVKNFEVGQKVDISGKSMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F +HG S +HR+ GSTG PGR++ K+MAGR GG ++T K L V+ Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVL 178 Query: 181 SVDDKRGLILVKGCVPG 197 +DD++ L++VKG VPG Sbjct: 179 KIDDQKNLLVVKGSVPG 195 >gi|303246993|ref|ZP_07333269.1| 50S ribosomal protein L3 [Desulfovibrio fructosovorans JJ] gi|302491700|gb|EFL51583.1| 50S ribosomal protein L3 [Desulfovibrio fructosovorans JJ] Length = 210 Score = 152 bits (383), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 87/204 (42%), Positives = 118/204 (57%), Gaps = 2/204 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT V+ +G IPVTV+ C V +T +K+GY A+Q+G + V+K Sbjct: 6 GILGRKLGMTRVFGDDGSIIPVTVIEAGPCPVTQVKTEEKDGYNAMQIGFDTIPERKVNK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G + L E R +G + F G+ V +TG +IGKGF+G Sbjct: 66 PEKGHMDKAGRGYFRTLRELRCD-GPAAFELGMDVTVDIFAPGETVKITGTSIGKGFAGV 124 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF GL+ THG +HRS GS G +PG+V K K+MAG MG VTV ++VV V Sbjct: 125 MKRHNFAGLKKTHGTEKAHRSGGSIGNNTEPGKVMKGKRMAGHMGARTVTVSGIQVVDVR 184 Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207 + LILVKG VPG +N ++VR Sbjct: 185 PEMNLILVKGQVPGP-RNCVVMVR 207 >gi|160941069|ref|ZP_02088407.1| hypothetical protein CLOBOL_05962 [Clostridium bolteae ATCC BAA-613] gi|158436018|gb|EDP13785.1| hypothetical protein CLOBOL_05962 [Clostridium bolteae ATCC BAA-613] Length = 226 Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 89/211 (42%), Positives = 121/211 (57%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N G +PVTVL C V +T + +GY AVQVG + + K Sbjct: 16 MKKAILATKVGMTQIFNENGALVPVTVLQAGPCVVTQVKTAENDGYKAVQVGFVDKRDKL 75 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKP +G F VS K+ + EF+ + ++ V F G +D T ++ GKGF Sbjct: 76 VSKPQKGHFDKAGVSYKRYVREFKFENAEEY-SVKDEIKADIFAAGDKIDATAISKGKGF 134 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR+ HG S HR GS G PGRVFK K M G MG ++TV+NLEVV Sbjct: 135 QGAIKRYGQHRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGHMGSKQITVQNLEVV 193 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD LILVKG VPG KK S + ++++ K Sbjct: 194 KVDVDNNLILVKGAVPGPKK-SLVTIKETVK 223 >gi|291562768|emb|CBL41584.1| 50S ribosomal protein L3, bacterial [butyrate-producing bacterium SS3/4] Length = 211 Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N EG +PVTVL C V +T + +GY AVQVG + + K Sbjct: 1 MKKAILATKVGMTQIFNDEGVLVPVTVLQAGPCVVTQVKTEENDGYKAVQVGFVDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F VS K+ + EFR + ++ V F G VD T ++ GKGF Sbjct: 61 VNKPVKGHFDKAGVSYKRFVREFRFENSEEY-NVKDEIKADIFAAGDKVDATAISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR HG S HR GS G PGRVFK K M G+MG ++T +NLE+V Sbjct: 120 QGAIKRLGQSRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGQMGNKKITTQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + LILVKG VPG KK S + ++++ K+ Sbjct: 179 KVDVENNLILVKGAVPGPKK-SLVTLKETVKA 209 >gi|312144247|ref|YP_003995693.1| 50S ribosomal protein L3 [Halanaerobium sp. 'sapolanicus'] gi|311904898|gb|ADQ15339.1| 50S ribosomal protein L3 [Halanaerobium sp. 'sapolanicus'] Length = 206 Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 92/200 (46%), Positives = 122/200 (61%), Gaps = 4/200 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ +KLGMT + G +PVTV+ C V +T +K+GY AVQ+G GE K Sbjct: 1 MAKAILGKKLGMTQYFKDNGDVVPVTVVEAGPCVVTQIKTTEKDGYDAVQLGFGEVKKHR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP G F S N+ PKK L EF+ D L GS + F VG +V+V+G++ GKGF Sbjct: 61 LNKPKLGQFESRNLEPKKYLREFKGLDLD--LSEGSEVAADIFEVGDIVNVSGVSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR N +HG S HR+ GS G D RVFK KKM GRMG NRVT +NLE+V Sbjct: 119 QGNIKRWNHHSGPMSHG-SHFHRAPGSIGS-VDARRVFKGKKMPGRMGHNRVTEENLEIV 176 Query: 181 SVDDKRGLILVKGCVPGAKK 200 VD +R ++L+ G VPG+KK Sbjct: 177 KVDLERNVLLIAGSVPGSKK 196 >gi|262038282|ref|ZP_06011672.1| 50S ribosomal protein L3 [Leptotrichia goodfellowii F0264] gi|261747749|gb|EEY35198.1| 50S ribosomal protein L3 [Leptotrichia goodfellowii F0264] Length = 208 Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 90/208 (43%), Positives = 125/208 (60%), Gaps = 4/208 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT ++ E + IPVTV+ VV ++ +K+GY AV + + K KN KP Sbjct: 2 ILGKKIGMTQIFENE-KLIPVTVIEAGPNFVVQKKSEEKDGYNAVTLAYDDKKEKNTIKP 60 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G F +SPKK L EF+V + + +G F + VD+ G + GKG +G M Sbjct: 61 EMGIFKKAGISPKKFLKEFKVAELESF-ELGQEFKVDVLEGIEFVDIVGTSKGKGTAGVM 119 Query: 125 KRHNFGGLRATHGVSISHRSHGS-TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 KRHNFGG RATHGVS +HR GS G V K KKMAGR+G +VTV+NL+VV D Sbjct: 120 KRHNFGGNRATHGVSRNHRLGGSNAGGAASNSNVPKGKKMAGRLGNEQVTVQNLKVVKFD 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 + L+LVKG VPG KN +++++ S K Sbjct: 180 AENNLLLVKGAVPGP-KNGYLVIKKSVK 206 >gi|225387237|ref|ZP_03757001.1| hypothetical protein CLOSTASPAR_00989 [Clostridium asparagiforme DSM 15981] gi|225046655|gb|EEG56901.1| hypothetical protein CLOSTASPAR_00989 [Clostridium asparagiforme DSM 15981] Length = 211 Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 86/211 (40%), Positives = 124/211 (58%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT +++ G IPVTVL C V +T+D +GY AVQVG + + K Sbjct: 1 MKKAILATKVGMTQIFDENGVLIPVTVLQAGPCVVTQVKTVDNDGYKAVQVGFVDKRDKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G F VS K+ + E R++ ++ V F G +D T ++ GKGF Sbjct: 61 VNKPQKGHFDKAGVSYKRYVRELRLENAEEY-SVKDEIKADIFAQGDKIDATAISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR+ HG S HR GS G PGRVFK K M G+MG ++T++NLEVV Sbjct: 120 QGAIKRYGQSRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGQMGNKQITIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + L+L+KG VPG KK S + ++++ K Sbjct: 179 KVDTENNLLLIKGAVPGPKK-SLVTIKETVK 208 >gi|212716611|ref|ZP_03324739.1| hypothetical protein BIFCAT_01540 [Bifidobacterium catenulatum DSM 16992] gi|225351045|ref|ZP_03742068.1| hypothetical protein BIFPSEUDO_02627 [Bifidobacterium pseudocatenulatum DSM 20438] gi|212660315|gb|EEB20890.1| hypothetical protein BIFCAT_01540 [Bifidobacterium catenulatum DSM 16992] gi|225158501|gb|EEG71743.1| hypothetical protein BIFPSEUDO_02627 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 213 Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 83/212 (39%), Positives = 122/212 (57%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+ ++ +KLGM+ V++ G +PVT++ + V ++ + +GY AVQ+G G+ V Sbjct: 4 RTALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKSEESDGYKAVQLGYGQVDPTKV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G F+ V+P++ L E R ++ P G + F G LVDVTG T GKGF+ Sbjct: 64 TKPLAGHFAKAGVTPRRHLAEVRTDNAEEFEP-GQELTAELFPEGTLVDVTGTTKGKGFA 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F R THG + R GS G P R+ K K+MAGRMG T NL +VS Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTNTTLNLTIVS 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + G++ +KG +PG K S +LVR + K A Sbjct: 183 SDVENGVLAIKGAIPGP-KGSIVLVRSAVKGA 213 >gi|119025339|ref|YP_909184.1| 50S ribosomal protein L3 [Bifidobacterium adolescentis ATCC 15703] gi|154486747|ref|ZP_02028154.1| hypothetical protein BIFADO_00572 [Bifidobacterium adolescentis L2-32] gi|166233119|sp|A1A069|RL3_BIFAA RecName: Full=50S ribosomal protein L3 gi|118764923|dbj|BAF39102.1| 50S ribosomal protein L3 [Bifidobacterium adolescentis ATCC 15703] gi|154084610|gb|EDN83655.1| hypothetical protein BIFADO_00572 [Bifidobacterium adolescentis L2-32] Length = 213 Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 83/212 (39%), Positives = 122/212 (57%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+ ++ +KLGM+ V++ G +PVT++ + V ++ + +GY AVQ+G G+ V Sbjct: 4 RTALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKSEESDGYKAVQLGYGQVDPTKV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G F+ V+P++ L E R ++ P G + F G LVDVTG T GKGF+ Sbjct: 64 TKPLAGHFAKAGVTPRRHLAEVRTDNAEEFEP-GQELTAELFPEGTLVDVTGTTKGKGFA 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F R THG + R GS G P R+ K K+MAGRMG T NL +VS Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTNTALNLTIVS 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + G++ +KG +PG K S +LVR + K A Sbjct: 183 SDVENGVLAIKGAIPGP-KGSIVLVRSAVKGA 213 >gi|298207727|ref|YP_003715906.1| 50S ribosomal protein L3 [Croceibacter atlanticus HTCC2559] gi|83850364|gb|EAP88232.1| 50S ribosomal protein L3 [Croceibacter atlanticus HTCC2559] Length = 205 Score = 151 bits (382), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 86/206 (41%), Positives = 122/206 (59%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G + K S Sbjct: 2 SGLIGKKIGMTSIFDENGKNIPCTVIQAGPCVVTQVRTSEVDGYKALQLGFDDKADKRAS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 G F SPK K+ EF+ +DD +G + F G+ VDV+G + GKGF G Sbjct: 62 NAAVGHFKKAGTSPKYKVAEFKKFEDD--FNLGDSVTVEMFKEGEFVDVSGTSKGKGFQG 119 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG+ +ATHG R+ GS G P RVFK KMAG+MG +V V+NL V+ Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGQMGNEKVKVQNLRVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V + LI+VKG VPG KNS++ ++ Sbjct: 180 VVADKNLIVVKGAVPG-HKNSYVTIQ 204 >gi|78211928|ref|YP_380707.1| 50S ribosomal protein L3 [Synechococcus sp. CC9605] gi|109893567|sp|Q3AMN0|RL3_SYNSC RecName: Full=50S ribosomal protein L3 gi|78196387|gb|ABB34152.1| 50S ribosomal protein L3 [Synechococcus sp. CC9605] Length = 218 Score = 151 bits (382), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ +GR +PVT++ C++ + D +GY AVQ+G GE + K Sbjct: 1 MSIGILGKKLGMSQFFDEQGRAVPVTLIEAGPCRITQLKNDDTDGYSAVQIGFGETREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + + L E+RV + L +G + F GQ VDV+G T+G+GF Sbjct: 61 INKPAQGHLNKSGEGLLRHLREYRVDSVEGL-ELGGAITVGDFEAGQKVDVSGDTVGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F THG S +HR GSTG PGR++ K+MAGR GG ++T + L ++ Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLTIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + L++VKG VPG K + + +R + + Sbjct: 179 KVDSEHNLLVVKGSVPG-KPGALLNIRPALR 208 >gi|329314933|gb|AEB89346.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus T0131] Length = 220 Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 94/219 (42%), Positives = 123/219 (56%), Gaps = 11/219 (5%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+QVG Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYK 60 Query: 53 AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 K +KP G + +PK+ + EFR D D VG S F G ++DVT Sbjct: 61 KDAKSNKYANKPAEGHAKKADAAPKRFIREFR-NVDVDAYEVGQEVSVDTFVAGDVIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF G +KRH +HG S HR+ GS G D RVFK +KM GRMGGN V Sbjct: 120 GVSKGKGFQGGIKRHGQSRGPMSHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 TV+NLEVV VD + +ILVKG VPG KK + +R S K Sbjct: 179 TVQNLEVVQVDTENKVILVKGNVPGPKK-GLVEIRTSIK 216 >gi|27468742|ref|NP_765379.1| 50S ribosomal protein L3 [Staphylococcus epidermidis ATCC 12228] gi|42559629|sp|Q8CRG0|RL3_STAES RecName: Full=50S ribosomal protein L3 gi|27316290|gb|AAO05465.1|AE016750_70 50S ribosomal protein L3 [Staphylococcus epidermidis ATCC 12228] Length = 220 Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 91/208 (43%), Positives = 119/208 (57%), Gaps = 10/208 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60 Query: 53 AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 G K +KP G + +PK+ + EFR + D +G S F G ++DVT Sbjct: 61 KGSKSNKYANKPAEGHAKKADTAPKRFIREFR-NVNVDEYELGQEVSVDTFETGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH G HG S HR+ GS G D +VFK +KM GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQGRGPMAHG-SHFHRAPGSVGMASDASKVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKK 200 TV+NLEVV VD + +ILVKG VPG KK Sbjct: 179 TVQNLEVVQVDTENSVILVKGNVPGPKK 206 >gi|314984887|gb|EFT28979.1| 50S ribosomal protein L3 [Propionibacterium acnes HL005PA1] Length = 173 Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 83/169 (49%), Positives = 105/169 (62%), Gaps = 2/169 (1%) Query: 46 YMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105 Y AVQ+G G + NV+KP G F V+P++ L E R D +G + F+ Sbjct: 1 YSAVQLGYGAVQAHNVTKPEAGPFEKAGVTPRRHLVELRTA-DASEYTLGQEIAADVFSE 59 Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165 VDVTG + GKG +G MKRH FGGLRATHGV HRS GS G PG+V K +MAG Sbjct: 60 SDFVDVTGTSKGKGTAGVMKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAG 119 Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 RMG RVTV+NL+V SVD +RG++LV+G VPG K S ++VR + K A Sbjct: 120 RMGVERVTVQNLQVHSVDAERGIMLVRGAVPG-PKGSLLVVRSAAKKAA 167 >gi|291457202|ref|ZP_06596592.1| 50S ribosomal protein L3 [Bifidobacterium breve DSM 20213] gi|291381037|gb|EFE88555.1| 50S ribosomal protein L3 [Bifidobacterium breve DSM 20213] Length = 213 Score = 151 bits (381), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 85/212 (40%), Positives = 118/212 (55%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R ++ +KLGM+ V++ G +PVT++ + V +T + +GY AVQ+G G V Sbjct: 4 RKALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKTEESDGYKAVQLGYGAIDPTKV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G F+ V+P++ L E R D D G + F G VDVTG T GKGF+ Sbjct: 64 TKPLAGHFAKAGVTPRRHLVEVRTD-DVDQFEAGQELAADLFEEGTEVDVTGTTKGKGFA 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F R THG + R GS G P R+ K K+MAGRMG T +NL VVS Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTATTQNLTVVS 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + G+I +KG +PG K +LVR + K A Sbjct: 183 ADVENGIIAIKGAIPGP-KGGIVLVRSAVKGA 213 >gi|315659227|ref|ZP_07912091.1| 50S ribosomal protein L3 [Staphylococcus lugdunensis M23590] gi|315495652|gb|EFU83983.1| 50S ribosomal protein L3 [Staphylococcus lugdunensis M23590] Length = 220 Score = 151 bits (381), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 93/219 (42%), Positives = 123/219 (56%), Gaps = 11/219 (5%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG + + Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60 Query: 59 ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 K +KP G +PK+ + EFR + D VG S F G ++DVT Sbjct: 61 KDAKSNKYATKPAEGHAKKAGTAPKRFIREFR-NVNVDEYEVGQEVSVDTFEAGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH HG S HR+ GS G D RVFK +K GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMAHG-SHFHRAPGSVGMASDASRVFKGQKAPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V+NLEVV VD + G+ILVKG VPGAKK + ++ S K Sbjct: 179 IVQNLEVVQVDTENGVILVKGNVPGAKK-GLVEIKSSIK 216 >gi|255526578|ref|ZP_05393485.1| ribosomal protein L3 [Clostridium carboxidivorans P7] gi|296187266|ref|ZP_06855662.1| 50S ribosomal protein L3 [Clostridium carboxidivorans P7] gi|255509686|gb|EET86019.1| ribosomal protein L3 [Clostridium carboxidivorans P7] gi|296048137|gb|EFG87575.1| 50S ribosomal protein L3 [Clostridium carboxidivorans P7] Length = 209 Score = 151 bits (381), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 83/212 (39%), Positives = 127/212 (59%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +KLGMT +++ G+ +PVTV+ C V +T +K+GY A+Q+G + + K Sbjct: 1 MKKAILGKKLGMTQIFDENGKIVPVTVIEAGPCVVFQKKTTEKDGYEAIQLGFDDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+G F+ + K+ + E RV+ D VG F G+ +DV+G++ GKGF Sbjct: 61 VNKPMKGHFAKAGAALKRFVKEIRVE-DISAYEVGQEIKADVFAAGEKIDVSGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR N +HG S HR+ GS G DP R FKNKK+ G MG TV NLEV Sbjct: 120 QGTIKRWNAQRGPMSHG-SKFHRAPGSMGASSDPSRTFKNKKLPGHMGNVNTTVLNLEVA 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ +IL+KG VPG K ++++R++ K+ Sbjct: 179 KVMPEKNIILIKGGVPGPNK-GFVVIRNTVKA 209 >gi|163786190|ref|ZP_02180638.1| 50S ribosomal protein L3 [Flavobacteriales bacterium ALC-1] gi|159878050|gb|EDP72106.1| 50S ribosomal protein L3 [Flavobacteriales bacterium ALC-1] Length = 205 Score = 151 bits (381), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 86/206 (41%), Positives = 123/206 (59%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G +A K+ + Sbjct: 2 SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCIVTQVRTEEVDGYSALQLGFDDATEKSAT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G S K+K+ EF+ ++ L G + FT G+ VDV G + GKGF G Sbjct: 62 KADLGHAKKAGTSVKRKVVEFKGFGEEYKL--GDAITVEQFTEGEFVDVAGTSKGKGFQG 119 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH F G+ +ATHG R+ GS G P RVFK KMAGRMGG V V+NL V Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGRMGGETVKVQNLRVYK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L++VKGCVPG KNS++++ Sbjct: 180 VVPEKNLLVVKGCVPG-HKNSYVIIE 204 >gi|118411058|ref|YP_874453.1| 50S ribosomal protein L3 [Phaeodactylum tricornutum] gi|125987627|sp|A0T0H8|RK3_PHATC RecName: Full=50S ribosomal protein L3, chloroplastic gi|116739805|gb|ABK20676.1| 50S ribosomal protein L3 [Phaeodactylum tricornutum] Length = 207 Score = 151 bits (381), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 78/209 (37%), Positives = 123/209 (58%), Gaps = 2/209 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT +++ G IPVT+L + C + + K+GY ++Q+G G K Sbjct: 1 MVVGLLGNKIGMTQIFDESGNIIPVTILKVGPCVITQVKNQSKDGYDSIQIGYGNVLSKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G N+ P K L EFR+ ++ + +G V + FT GQLV++ G +IGKGF Sbjct: 61 LTQPELGHLQKSNIQPLKYLKEFRINQETEFQ-IGQVLNVDSFTPGQLVNIQGKSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRHNF THG S +HR+ GS G PGRV KKM+G++G T+K L+++ Sbjct: 120 SGLQKRHNFTRGPMTHG-SKNHRAPGSIGMGTTPGRVLPGKKMSGQLGNKITTIKKLKII 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 ++ + ++++KG VPG N +V + Sbjct: 179 QINSEENILVIKGSVPGKPGNLLSIVPSA 207 >gi|331091667|ref|ZP_08340501.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 2_1_46FAA] gi|330403424|gb|EGG82983.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 2_1_46FAA] Length = 226 Score = 151 bits (381), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 91/228 (39%), Positives = 126/228 (55%), Gaps = 19/228 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK- 59 M+ ++A K+GMT ++N +G PVTVL C V +T++ +GY AVQVG + K K Sbjct: 1 MKKAILATKVGMTQIFNEDGALTPVTVLQAGPCVVTQIKTVENDGYSAVQVGFVDKKDKI 60 Query: 60 ---------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V+K +G F VS K+ + EF+ + D+ + F Sbjct: 61 VNVDKNGKKEIVHRHGVTKAEKGHFDKAGVSGKRFVREFKFENADEYT-LAQEIKADIFA 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G VD T ++ GKGF GA+KRHN THG S HR GS G DP +VFK KKM Sbjct: 120 AGDKVDATAISKGKGFQGAIKRHNQHRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G MG ++T++NLE+V VD + LILVKG VPG KK S + +++S K+ Sbjct: 179 GHMGSKKITIQNLEIVRVDAENNLILVKGSVPGPKK-SLVTIKESVKA 225 >gi|294786411|ref|ZP_06751665.1| 50S ribosomal protein L3 [Parascardovia denticolens F0305] gi|315225973|ref|ZP_07867761.1| 50S ribosomal protein L3 [Parascardovia denticolens DSM 10105] gi|294485244|gb|EFG32878.1| 50S ribosomal protein L3 [Parascardovia denticolens F0305] gi|315120105|gb|EFT83237.1| 50S ribosomal protein L3 [Parascardovia denticolens DSM 10105] Length = 217 Score = 151 bits (381), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 85/212 (40%), Positives = 121/212 (57%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+ +V +KLGM+ +++ G +PVT++ + V ++ D++GY AVQ+G G V Sbjct: 7 RTALVGKKLGMSQIWDENGFFVPVTLVDVSTNVVTAVKSEDRDGYKAVQLGYGAIDPTKV 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G F+ V+P++ L E R + P G + F+ G VDVTG T GKGF+ Sbjct: 67 TKPLAGHFAKAGVTPRRHLVEVRTEDAGSYQP-GQELAADTFSDGDQVDVTGTTKGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F R THG + R GS G P RV K K+MAGRMG T + L VVS Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSIGACATPSRVLKGKRMAGRMGHVTHTTQGLTVVS 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + GLI +KG +PG K + +LVR + K A Sbjct: 186 ADVENGLIAIKGAIPGP-KGAIVLVRSAVKGA 216 >gi|238916265|ref|YP_002929782.1| large subunit ribosomal protein L3 [Eubacterium eligens ATCC 27750] gi|259647745|sp|C4Z2T0|RL3_EUBE2 RecName: Full=50S ribosomal protein L3 gi|238871625|gb|ACR71335.1| large subunit ribosomal protein L3 [Eubacterium eligens ATCC 27750] Length = 211 Score = 151 bits (381), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 89/213 (41%), Positives = 123/213 (57%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G PVTVL C V +T++ +GY AVQVG + + K Sbjct: 1 MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTVENDGYDAVQVGFADIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F V K+ L EF+ + + V F G VD T ++ GKGF Sbjct: 61 VNKPVKGHFDKAEVPYKRFLREFKFENASEY-SVKDEIKADIFAAGDKVDATAISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR HG S HR GS G PGRVFK K M G MG R+T++NLEVV Sbjct: 120 QGAIKRLGQSRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGHMGSKRITIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + +ILVKG VPG KK S + ++++ K+A Sbjct: 179 RVDVENNVILVKGAVPGPKK-SLVTLKETVKAA 210 >gi|116075767|ref|ZP_01473026.1| 50S ribosomal protein L3 [Synechococcus sp. RS9916] gi|116067082|gb|EAU72837.1| 50S ribosomal protein L3 [Synechococcus sp. RS9916] Length = 218 Score = 151 bits (381), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 81/211 (38%), Positives = 129/211 (61%), Gaps = 7/211 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ +G+ +PVT++ C++ +T + +GY AVQ+G GE + K Sbjct: 1 MSIGILGKKLGMSQFFDEQGKAVPVTLIEAGPCRITQLKTSETDGYSAVQIGFGETRDKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118 ++KP +G + + L E+RV DD+ +G+ + F GQ VDV+G ++G+ Sbjct: 61 INKPAKGHLAKSGEELLRHLSEYRV---DDVSGFELGNQVTVGDFEAGQKVDVSGDSMGR 117 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF+G KRH F THG S +HR GSTG PGR++ K+MAGR GG ++T + L Sbjct: 118 GFAGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLT 176 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 ++ VD +R L++VKG VPG K S + +R + Sbjct: 177 IIKVDSERNLLVVKGSVPG-KPGSLLNIRPA 206 >gi|171741273|ref|ZP_02917080.1| hypothetical protein BIFDEN_00348 [Bifidobacterium dentium ATCC 27678] gi|283455366|ref|YP_003359930.1| 50S ribosomal protein L3 [Bifidobacterium dentium Bd1] gi|306823568|ref|ZP_07456943.1| 50S ribosomal protein L3 [Bifidobacterium dentium ATCC 27679] gi|309802910|ref|ZP_07697011.1| 50S ribosomal protein L3 [Bifidobacterium dentium JCVIHMP022] gi|171276887|gb|EDT44548.1| hypothetical protein BIFDEN_00348 [Bifidobacterium dentium ATCC 27678] gi|283102000|gb|ADB09106.1| rplC 50S ribosomal protein L3 [Bifidobacterium dentium Bd1] gi|304553275|gb|EFM41187.1| 50S ribosomal protein L3 [Bifidobacterium dentium ATCC 27679] gi|308220377|gb|EFO76688.1| 50S ribosomal protein L3 [Bifidobacterium dentium JCVIHMP022] Length = 213 Score = 151 bits (381), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 82/212 (38%), Positives = 122/212 (57%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+ ++ +KLGM+ V++ G +PVT++ + V ++ + +GY AVQ+G G+ V Sbjct: 4 RTALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKSEESDGYKAVQLGYGQVDPTKV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G F+ V+P++ L E R ++ P G + F G LVDVTG T GKGF+ Sbjct: 64 TKPLAGHFAKAGVTPRRHLAEVRTDNAEEFEP-GQELTAELFPEGTLVDVTGTTKGKGFA 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F R THG + R GS G P R+ K K+MAGRMG T +NL +VS Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTNTAQNLTIVS 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + G++ +KG +PG K +LVR + K A Sbjct: 183 SDVENGVLAIKGAIPGP-KGGIVLVRSAVKGA 213 >gi|146317731|ref|YP_001197443.1| 50S ribosomal protein L3 [Streptococcus suis 05ZYH33] gi|253750987|ref|YP_003024128.1| 50S ribosomal protein L3 [Streptococcus suis SC84] gi|253752887|ref|YP_003026027.1| 50S ribosomal protein L3 [Streptococcus suis P1/7] gi|253754712|ref|YP_003027852.1| 50S ribosomal protein L3 [Streptococcus suis BM407] gi|330831920|ref|YP_004400745.1| 50S ribosomal protein L3 [Streptococcus suis ST3] gi|166234601|sp|A4VSF4|RL3_STRSY RecName: Full=50S ribosomal protein L3 gi|145688537|gb|ABP89043.1| Ribosomal protein L3 [Streptococcus suis 05ZYH33] gi|251815276|emb|CAZ50842.1| 50S ribosomal protein L3 [Streptococcus suis SC84] gi|251817176|emb|CAZ54898.1| 50S ribosomal protein L3 [Streptococcus suis BM407] gi|251819132|emb|CAR44223.1| 50S ribosomal protein L3 [Streptococcus suis P1/7] gi|292557531|gb|ADE30532.1| ribosomal protein L3 [Streptococcus suis GZ1] gi|319757241|gb|ADV69183.1| 50S ribosomal protein L3 [Streptococcus suis JS14] gi|329306143|gb|AEB80559.1| 50S ribosomal protein L3 [Streptococcus suis ST3] Length = 208 Score = 150 bits (380), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 128/212 (60%), Gaps = 6/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYAAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGQEITVETFAAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFK K +AGRMGGNRVT++NLEVV Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGNRVTIQNLEVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ +IL+KG VPGAKK S I ++ + K+ Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKA 206 >gi|73661972|ref|YP_300753.1| 50S ribosomal protein L3 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|82581593|sp|Q49ZG8|RL3_STAS1 RecName: Full=50S ribosomal protein L3 gi|72494487|dbj|BAE17808.1| 50S ribosomal protein L3 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 219 Score = 150 bits (380), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 91/219 (41%), Positives = 126/219 (57%), Gaps = 11/219 (5%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58 M G++ RK+GMT V+ G IPVTV+ ++ ++ + +GY A+QVG + + Sbjct: 1 MTKGILGRKIGMTQVFGENGDLIPVTVVEASQNVILQKKSEEIDGYNAIQVGYEDKQAYK 60 Query: 59 ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 K +KP G +PK+ + EFR + D VG S + F G ++DVT Sbjct: 61 KDSRSSKYANKPAEGHAKKAGTAPKRFIREFR-NVNVDEYEVGQEVSVNTFEAGDVIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRHN +HG S HR+ GS G D RVFK +KM GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHNQARGPMSHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 TV+NLEVV +D + +ILVKG VPG KK ++ + S K Sbjct: 179 TVQNLEVVQIDAENNVILVKGNVPGPKK-GFVEITSSIK 216 >gi|313204917|ref|YP_004043574.1| LSU ribosomal protein l3p [Paludibacter propionicigenes WB4] gi|312444233|gb|ADQ80589.1| LSU ribosomal protein L3P [Paludibacter propionicigenes WB4] Length = 205 Score = 150 bits (380), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 82/203 (40%), Positives = 123/203 (60%), Gaps = 3/203 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++ +GY AVQVG K+ +K Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKTVETDGYEAVQVGFQTKTEKHTNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 G F + V+P++ L EF+ + + +G + F VDV G + GKGF G Sbjct: 63 AEAGIFKAAGVAPQRHLVEFKGFETE--FKLGDAITVELFEADTFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ +ATHG R+ GS G P RVFK +MAGR GG++VT++NL+V+ V Sbjct: 121 VKRHGFGGVGQATHGQHNRLRAPGSLGASSYPSRVFKGMRMAGRTGGDKVTMQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205 + LIL+KG VPGAK + I+ Sbjct: 181 IPEHNLILIKGSVPGAKGSIVII 203 >gi|237666933|ref|ZP_04526918.1| 50S ribosomal protein L3 [Clostridium butyricum E4 str. BoNT E BL5262] gi|237658132|gb|EEP55687.1| 50S ribosomal protein L3 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 209 Score = 150 bits (380), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 84/205 (40%), Positives = 121/205 (59%), Gaps = 2/205 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT +++ G+ +PVTV+ C VV +TL+ +GY A+QVG E + K Sbjct: 1 MKKAIIGKKIGMTQIFDENGKVVPVTVVEAGPCVVVQKKTLENDGYEAIQVGFEEIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G F+ VS ++ L EFR++ D VG F G VDV+ ++ GKGF Sbjct: 61 ANKPRKGQFAKAGVSIRRTLKEFRLE-DITSYEVGQEIKADVFEAGDKVDVSAVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR N THG S HR+ GS G DP R FKNK+M G MG TV NL+VV Sbjct: 120 QGCIKRWNQQRGPMTHG-SKFHRAPGSMGASSDPSRTFKNKRMPGHMGSVNTTVLNLQVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWIL 205 V ++ LIL+KG +PG K + ++ Sbjct: 179 KVIAEKNLILIKGGIPGPNKGTVVI 203 >gi|269122581|ref|YP_003310758.1| ribosomal protein L3 [Sebaldella termitidis ATCC 33386] gi|268616459|gb|ACZ10827.1| ribosomal protein L3 [Sebaldella termitidis ATCC 33386] Length = 208 Score = 150 bits (380), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 91/208 (43%), Positives = 124/208 (59%), Gaps = 4/208 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT ++ E + IPVTV+ V+ + ++K+GY A+ +G E K KN KP Sbjct: 2 LLGKKIGMTQIFEGE-KLIPVTVIEAGPNFVIQKKNVEKDGYNALTLGYDEKKEKNTIKP 60 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G F V+PKK L EFR + D +G F + VDV+G + GKG +G M Sbjct: 61 EMGVFKKAGVTPKKFLKEFRTD-NLDSYELGQEIKVDSFEGIEFVDVSGTSKGKGTAGVM 119 Query: 125 KRHNFGGLRATHGVSISHRSHGS-TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 KRHNFGG RATHGVS +HR GS G V K KKMAGR+G VTV+NL VV D Sbjct: 120 KRHNFGGNRATHGVSRNHRLGGSNAGGAASNSNVPKGKKMAGRLGNENVTVQNLRVVKFD 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 + L+LVKG +PG KN +++++ S K Sbjct: 180 VENNLLLVKGAIPGP-KNGYLVIKKSVK 206 >gi|320538165|ref|ZP_08038060.1| 50S ribosomal protein L3 [Treponema phagedenis F0421] gi|320144982|gb|EFW36703.1| 50S ribosomal protein L3 [Treponema phagedenis F0421] Length = 207 Score = 150 bits (380), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 88/208 (42%), Positives = 128/208 (61%), Gaps = 6/208 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V+N +G +PVTV+ ++ VV + +K GY AV +G GE K K+ +K Sbjct: 3 GLIGKKIGMTQVFNEQGHLMPVTVIQVEPNTVVALKDEEKFGYSAVVLGLGEMKEKHAAK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ ++ P K L EFR D + VG + +DVT ++ GKGF G Sbjct: 63 PYAGQFA--DMKPVKLLKEFR--GFDKEVSVGEKIGVEILDTTRYLDVTAVSKGKGFQGV 118 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR FGG RA+HG S HR GSTG PGR FKN KM GRMG +VTV+NL + +D Sbjct: 119 VKRWGFGGGRASHG-SKFHREAGSTGQCTSPGRSFKNVKMPGRMGAEKVTVQNLRIEKID 177 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 + G+++V+G VPG KK++ + ++ + K Sbjct: 178 PEMGVVMVRGSVPG-KKDATVFLKSAVK 204 >gi|157151310|ref|YP_001451235.1| 50S ribosomal protein L3 [Streptococcus gordonii str. Challis substr. CH1] gi|262283583|ref|ZP_06061348.1| ribosomal protein L3 [Streptococcus sp. 2_1_36FAA] gi|189029485|sp|A8AZM5|RL3_STRGC RecName: Full=50S ribosomal protein L3 gi|157076104|gb|ABV10787.1| ribosomal protein L3 [Streptococcus gordonii str. Challis substr. CH1] gi|262260640|gb|EEY79341.1| ribosomal protein L3 [Streptococcus sp. 2_1_36FAA] Length = 208 Score = 150 bits (380), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 129/212 (60%), Gaps = 6/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFAAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+ Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIA 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ +IL+KG VPGAKK S I ++ + K+ Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKA 206 >gi|116072564|ref|ZP_01469830.1| 50S ribosomal protein L3 [Synechococcus sp. BL107] gi|116064451|gb|EAU70211.1| 50S ribosomal protein L3 [Synechococcus sp. BL107] Length = 218 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 79/197 (40%), Positives = 119/197 (60%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +GR +PVT++ C++ + D +GY AVQ+G GE + K Sbjct: 1 MSIGILGKKLGMSQLFDEQGRAVPVTLIEAGPCRITQLKNDDTDGYAAVQIGFGETREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + + L E+RV D L +G + S F GQ VDV+G T+G+GF Sbjct: 61 INKPSKGHLTKSGEDLLRHLREYRVDNVDG-LELGGSITVSDFEAGQKVDVSGDTMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F THG S +HR GS G PGR++ K+M+GR GG + T + L ++ Sbjct: 120 AGLQKRHGFSRGPMTHG-SKNHRQPGSIGAGTTPGRIYPGKRMSGRYGGKKTTTRGLTIL 178 Query: 181 SVDDKRGLILVKGCVPG 197 VD R L++VKG VPG Sbjct: 179 RVDSDRNLLVVKGSVPG 195 >gi|299830598|ref|YP_003735046.1| 50S ribosomal protein L3 [Durinskia baltica] gi|297384962|gb|ADI40261.1| 50S ribosomal protein L3 [Durinskia baltica] Length = 207 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 80/206 (38%), Positives = 121/206 (58%), Gaps = 2/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT +++ G IPVT+L + C V +T K+GY ++QVG K+ Sbjct: 1 MSVGLLGNKIGMTQIFDETGNIIPVTILKVGPCVVTQVKTEAKDGYNSIQVGYSRVSSKS 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G N+ P K L EFR+ D + VG + ++GQ VD+ G TIGKGF Sbjct: 61 LTQPELGHLQKSNIQPLKHLKEFRITNDQN-FEVGQTLNVDLLSLGQFVDIQGKTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRHNF THG S +HR+ GS G PGRV K+M+G++G +TVK L+V+ Sbjct: 120 TGLQKRHNFARGPMTHG-SKNHRAPGSIGMGTTPGRVLPGKRMSGQVGNKVITVKKLKVI 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 ++ + ++++KG VPG N +V Sbjct: 179 QLNLEENILVIKGSVPGKPGNLLSIV 204 >gi|189095434|ref|YP_001936447.1| ribosomal protein L3 [Heterosigma akashiwo] gi|157694777|gb|ABV66053.1| 50S ribosomal protein L3 [Heterosigma akashiwo] gi|157778008|gb|ABV70194.1| 50S ribosomal protein L3 [Heterosigma akashiwo] Length = 208 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 81/201 (40%), Positives = 118/201 (58%), Gaps = 2/201 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT +++ G +PVTV+ C V + +GY A+Q+G K+KN Sbjct: 1 MSIGILGTKIGMTQIFDENGLAVPVTVVQSGPCIVTQIKNFSTDGYNAIQIGFLAKKIKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +K +G F+ V P++ L EF+V+ ++ +G F +GQ V+VTG +IGKGF Sbjct: 61 TNKAEQGHFTKVGCQPQRILKEFKVESTENFT-LGQQIKVDCFEIGQFVNVTGRSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KR+NF THG S +HR GS G PGRV KKMAG+ G VT+ L+V+ Sbjct: 120 SGLQKRYNFSRGPMTHG-SKNHRLPGSIGAGTTPGRVLPGKKMAGQYGNKNVTISKLKVL 178 Query: 181 SVDDKRGLILVKGCVPGAKKN 201 ++D K L+L+KG +PG N Sbjct: 179 NIDSKENLLLLKGAIPGKAGN 199 >gi|322386354|ref|ZP_08059984.1| 50S ribosomal protein L3 [Streptococcus cristatus ATCC 51100] gi|321269578|gb|EFX52508.1| 50S ribosomal protein L3 [Streptococcus cristatus ATCC 51100] Length = 208 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 130/212 (61%), Gaps = 6/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVVEAAPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ +IL+KG VPGAKK S + ++ + K+ Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLVTIKSAVKA 206 >gi|56418641|ref|YP_145959.1| 50S ribosomal protein L3 [Geobacillus kaustophilus HTA426] gi|261417607|ref|YP_003251289.1| 50S ribosomal protein L3 [Geobacillus sp. Y412MC61] gi|297528482|ref|YP_003669757.1| 50S ribosomal protein L3 [Geobacillus sp. C56-T3] gi|319765265|ref|YP_004130766.1| 50S ribosomal protein L3 [Geobacillus sp. Y412MC52] gi|81819840|sp|Q5L3Z7|RL3_GEOKA RecName: Full=50S ribosomal protein L3 gi|56378483|dbj|BAD74391.1| 50S ribosomal protein L3 [Geobacillus kaustophilus HTA426] gi|261374064|gb|ACX76807.1| 50S ribosomal protein L3 [Geobacillus sp. Y412MC61] gi|297251734|gb|ADI25180.1| 50S ribosomal protein L3 [Geobacillus sp. C56-T3] gi|317110131|gb|ADU92623.1| 50S ribosomal protein L3 [Geobacillus sp. Y412MC52] Length = 213 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 85/200 (42%), Positives = 120/200 (60%), Gaps = 3/200 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ G IPVTV+H V+ +T++ +GY A+Q+G + K Sbjct: 1 MTKGILGRKIGMTQIFAENGDLIPVTVIHATPNVVLQKKTIENDGYEAIQLGFEDISEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G + N +PK+ + E R D+ VG F+ G++VDVTG++ GKGF Sbjct: 61 ANKPQIGHAAKANTAPKRFIREIRGANIDEY-EVGQEVKVDIFSEGEIVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G P RVFK K + GRMGG RVT++NL++V Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGSIA-PNRVFKTKNLPGRMGGERVTIQNLKIV 177 Query: 181 SVDDKRGLILVKGCVPGAKK 200 VD +R L+L+KG VPG +K Sbjct: 178 KVDPERNLLLIKGNVPGPRK 197 >gi|120437174|ref|YP_862860.1| 50S ribosomal protein L3 [Gramella forsetii KT0803] gi|166233147|sp|A0M598|RL3_GRAFK RecName: Full=50S ribosomal protein L3 gi|117579324|emb|CAL67793.1| 50S ribosomal protein L3 [Gramella forsetii KT0803] Length = 203 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 83/205 (40%), Positives = 123/205 (60%), Gaps = 6/205 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G + K V Sbjct: 2 SGLIGKKIGMTSIFDENGKNIPCTVIQAGPCVVTQVRTKEVDGYEALQLGFDDKK--TVG 59 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G K+K+ EF+ +D +G + +F G+ VD+ G + GKGF G Sbjct: 60 KAAEGHAKKAGTVAKRKVVEFQGYNED--YKLGDSVTVEHFKEGEFVDIAGTSKGKGFQG 117 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG+ +ATHG R+ GS G P RVFK KMAGRMGG RV ++NL V+ Sbjct: 118 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGRMGGERVKIENLRVLK 177 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 V + L+++KGCVPG+ KNS++++ Sbjct: 178 VVADKNLLVIKGCVPGS-KNSYVII 201 >gi|210611125|ref|ZP_03288739.1| hypothetical protein CLONEX_00929 [Clostridium nexile DSM 1787] gi|210152112|gb|EEA83119.1| hypothetical protein CLONEX_00929 [Clostridium nexile DSM 1787] Length = 241 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 91/228 (39%), Positives = 126/228 (55%), Gaps = 19/228 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G PVTVL C V +T++ +GY AVQVG + K K Sbjct: 16 MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQIKTVENDGYSAVQVGFVDKKDKI 75 Query: 61 V----------------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V +K +G F VS K+ + EF+ + ++ + F Sbjct: 76 VNKDKNGKKEIVHRHGTTKAEKGHFDKAGVSSKRFVREFKFENAEEFT-LAQEIKADIFA 134 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G VD T ++ GKGF GA+KRHN THG S HR GS G DP +VFK KKM Sbjct: 135 AGDKVDATAISKGKGFQGAIKRHNQHRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKMP 193 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G MG R+T++NLE+V VD + LILVKG VPG KK S + +++S K+ Sbjct: 194 GHMGSKRITIQNLEIVRVDAENNLILVKGSVPGPKK-SLVTIKESVKA 240 >gi|268316408|ref|YP_003290127.1| 50S ribosomal protein L3 [Rhodothermus marinus DSM 4252] gi|262333942|gb|ACY47739.1| ribosomal protein L3 [Rhodothermus marinus DSM 4252] Length = 210 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 91/197 (46%), Positives = 118/197 (59%), Gaps = 3/197 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVKNV 61 SG++ RK+GMT V++ G IP T++ + VV +T + K+GY AVQ+G GE K K Sbjct: 2 SGMLGRKIGMTQVFDQAGNCIPCTIIQAEPNAVVQVKTAEGKDGYEAVQLGYGERKPKRT 61 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 ++ M G F VSPK+ L EF+ D+ P V F G+L+DV G+T G+GF Sbjct: 62 TRAMLGHFEKAGVSPKQVLREFK-NFVLDVKPGDEVRVEQLFREGELIDVVGITKGRGFQ 120 Query: 122 GAMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH FGG+ A THG R+ GS G P VFK +MAGRMG RV VKNL VV Sbjct: 121 GVVKRHGFGGVGARTHGQHNRERAPGSIGASSFPSHVFKGMRMAGRMGNQRVKVKNLRVV 180 Query: 181 SVDDKRGLILVKGCVPG 197 + + LILVKG VPG Sbjct: 181 RIFPEHNLILVKGAVPG 197 >gi|45644693|gb|AAS73081.1| predicted ribosomal protein L3 [uncultured marine gamma proteobacterium EBAC20E09] Length = 202 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 81/186 (43%), Positives = 116/186 (62%), Gaps = 2/186 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 M+ ++ +G IPVT + + V +T + NGY AV V + K+ N+SK FF Sbjct: 1 MSRLFLEDGESIPVTAISVCGNFVADIKTKENNGYNAV-VLSKSKKINNLSKSQSEFFKK 59 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 N++P L EF+V+ D D +G + F VGQ VD+TG + GKG++G +KRHNF Sbjct: 60 NNINPGS-LSEFKVENDIDTFEIGKHMTADVFEVGQFVDITGTSKGKGYAGVIKRHNFSM 118 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 ATHG S++HR+HGS G Q PGRV+K KKM+G MG + TV+NL++V +D + ++ V Sbjct: 119 QDATHGNSLAHRAHGSIGQCQTPGRVWKGKKMSGHMGNVQKTVQNLKIVELDVENNVVYV 178 Query: 192 KGCVPG 197 KG VPG Sbjct: 179 KGAVPG 184 >gi|319940060|ref|ZP_08014414.1| 50S ribosomal protein L3 [Streptococcus anginosus 1_2_62CV] gi|319810774|gb|EFW07101.1| 50S ribosomal protein L3 [Streptococcus anginosus 1_2_62CV] Length = 208 Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 129/212 (60%), Gaps = 6/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVVEATPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+ Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIA 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ +IL+KG VPGAKK S I ++ + K+ Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKA 206 >gi|314934297|ref|ZP_07841656.1| 50S ribosomal protein L3 [Staphylococcus caprae C87] gi|313652227|gb|EFS15990.1| 50S ribosomal protein L3 [Staphylococcus caprae C87] Length = 220 Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 92/208 (44%), Positives = 117/208 (56%), Gaps = 10/208 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60 Query: 53 AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 G K +KP G + +PK+ + EFR + D VG S F G ++DVT Sbjct: 61 KGSKSNKYANKPAEGHAKKADTAPKRFIREFR-NVNVDEYEVGQEVSVDTFETGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH HG S HR+ GS G D RVFK +KM GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMGHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKK 200 TV+NLEVV VD +ILVKG VPG KK Sbjct: 179 TVQNLEVVQVDTDNSVILVKGNVPGPKK 206 >gi|229818240|ref|ZP_04448522.1| hypothetical protein BIFANG_03538 [Bifidobacterium angulatum DSM 20098] gi|229784491|gb|EEP20605.1| hypothetical protein BIFANG_03538 [Bifidobacterium angulatum DSM 20098] Length = 216 Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 83/212 (39%), Positives = 121/212 (57%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R ++ RKLGM+ V++ G +PVT++ + V +T + +GY AVQ+G G+ V Sbjct: 7 RKALLGRKLGMSQVWDENGFFVPVTLVDVSTNVVTAIKTEETDGYTAVQIGYGQIDPTKV 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G F+ V+P++ L E R + + +G + F G VDVTG T GKGF+ Sbjct: 67 TKPLAGHFAKAGVTPRRHLVEVR-EDNATEYELGQELTAEVFEEGAEVDVTGTTKGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F R THG + R GS G P R+ K K+MAGRMG TV+NL +VS Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTSTVQNLTIVS 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + G++ +KG +PG K +LVR + K A Sbjct: 186 ADVENGVLAIKGAIPGP-KGGIVLVRSAVKGA 216 >gi|223042682|ref|ZP_03612731.1| 50S ribosomal protein L3 [Staphylococcus capitis SK14] gi|222444345|gb|EEE50441.1| 50S ribosomal protein L3 [Staphylococcus capitis SK14] Length = 220 Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 92/208 (44%), Positives = 117/208 (56%), Gaps = 10/208 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60 Query: 53 AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 G K +KP G + +PK+ + EFR + D VG S F G ++DVT Sbjct: 61 KGSKSNKYANKPAEGHAKKADTTPKRFIREFR-NVNVDEYEVGQEVSVDTFETGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH HG S HR+ GS G D RVFK +KM GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMGHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKK 200 TV+NLEVV VD +ILVKG VPG KK Sbjct: 179 TVQNLEVVQVDTDNSVILVKGNVPGPKK 206 >gi|301168458|emb|CBW28048.1| 50S ribosomal protein L3 [Bacteriovorax marinus SJ] Length = 232 Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 91/206 (44%), Positives = 125/206 (60%), Gaps = 8/206 (3%) Query: 9 KLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGF 68 K GMT +++ G +PVTV+ L V +T++ +GY A QVG GE + K V KP +G Sbjct: 31 KAGMTRIFDENGNHVPVTVVKLIPNIVTQVKTVETDGYEAYQVGYGEKREKLVKKPTKGH 90 Query: 69 FSSVNVSPK-KKLFEFRVQ--KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 NVS K E + + DDL G S + FT VDVTG+T GKGF G MK Sbjct: 91 LKKANVSANLTKFAEIKNETVSTDDL---GKELSVANFTPETYVDVTGVTKGKGFQGVMK 147 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R+NF G A+HG S HR++GS G R PGRVFK KKM G MG + TV+N++VV V+ + Sbjct: 148 RYNFAGGPASHG-SHFHRTNGSIGNRATPGRVFKLKKMPGHMGAVKQTVQNVKVVEVNTE 206 Query: 186 RGLILVKGCVPGAKKNSWILVRDSFK 211 +G +L+KG +PG+ KN ++ + + K Sbjct: 207 KGYMLIKGSLPGS-KNGFVKIAKALK 231 >gi|78185522|ref|YP_377956.1| 50S ribosomal protein L3 [Synechococcus sp. CC9902] gi|109893566|sp|Q3AUW3|RL3_SYNS9 RecName: Full=50S ribosomal protein L3 gi|78169816|gb|ABB26913.1| LSU ribosomal protein L3P [Synechococcus sp. CC9902] Length = 218 Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 78/197 (39%), Positives = 119/197 (60%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +GR +PVT++ C++ + D +GY AVQ+G GE + K Sbjct: 1 MSIGILGKKLGMSQLFDEQGRAVPVTLIEAGPCRITQLKNDDTDGYAAVQIGFGETREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + + L E+RV D L +G + S F GQ VDV+G T+G+GF Sbjct: 61 INKPSKGHLTKSGEDLLRHLREYRVDNVDG-LELGGSITVSDFEAGQKVDVSGDTMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F THG S +HR GS G PGR++ K+M+GR GG + T + L ++ Sbjct: 120 AGLQKRHGFSRGPMTHG-SKNHRQPGSIGAGTTPGRIYPGKRMSGRYGGKKTTTRGLTIL 178 Query: 181 SVDDKRGLILVKGCVPG 197 +D R L++VKG VPG Sbjct: 179 RIDSDRNLLVVKGSVPG 195 >gi|23336501|ref|ZP_00121715.1| COG0087: Ribosomal protein L3 [Bifidobacterium longum DJO10A] gi|23466130|ref|NP_696733.1| 50S ribosomal protein L3 [Bifidobacterium longum NCC2705] gi|189440569|ref|YP_001955650.1| 50S ribosomal protein L3 [Bifidobacterium longum DJO10A] gi|227546476|ref|ZP_03976525.1| ribosomal protein L3 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239621010|ref|ZP_04664041.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|296454870|ref|YP_003662014.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. longum JDM301] gi|312133874|ref|YP_004001213.1| rplc [Bifidobacterium longum subsp. longum BBMN68] gi|317483450|ref|ZP_07942440.1| 50S ribosomal protein L3 [Bifidobacterium sp. 12_1_47BFAA] gi|322689929|ref|YP_004209663.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. infantis 157F] gi|322691870|ref|YP_004221440.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. longum JCM 1217] gi|42559648|sp|Q8G417|RL3_BIFLO RecName: Full=50S ribosomal protein L3 gi|226725135|sp|B3DQ13|RL3_BIFLD RecName: Full=50S ribosomal protein L3 gi|23326866|gb|AAN25369.1| 50S ribosomal protein L3 [Bifidobacterium longum NCC2705] gi|189429004|gb|ACD99152.1| Ribosomal protein L3 [Bifidobacterium longum DJO10A] gi|227213025|gb|EEI80904.1| ribosomal protein L3 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239516111|gb|EEQ55978.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|291516469|emb|CBK70085.1| LSU ribosomal protein L3P [Bifidobacterium longum subsp. longum F8] gi|296184302|gb|ADH01184.1| ribosomal protein L3 [Bifidobacterium longum subsp. longum JDM301] gi|311773167|gb|ADQ02655.1| RplC [Bifidobacterium longum subsp. longum BBMN68] gi|316915136|gb|EFV36568.1| 50S ribosomal protein L3 [Bifidobacterium sp. 12_1_47BFAA] gi|320456726|dbj|BAJ67348.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. longum JCM 1217] gi|320461265|dbj|BAJ71885.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. infantis 157F] Length = 213 Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 84/212 (39%), Positives = 118/212 (55%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R ++ +KLGM+ V++ G +PVT++ + V +T + +GY AVQ+G G V Sbjct: 4 RKALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKTEESDGYKAVQLGYGAIDPTKV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G F+ V+P++ L E R D D G + F G VDVTG T GKGF+ Sbjct: 64 TKPLAGHFAKAGVTPRRHLVEVRTD-DVDQFEAGQELAADLFEEGAEVDVTGTTKGKGFA 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F R THG + R GS G P R+ K K+MAGRMG T +NL VVS Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTATTQNLTVVS 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + G++ +KG +PG K +LVR + K A Sbjct: 183 ADVENGILAIKGAIPGP-KGGIVLVRSAVKGA 213 >gi|315222820|ref|ZP_07864706.1| 50S ribosomal protein L3 [Streptococcus anginosus F0211] gi|315188123|gb|EFU21852.1| 50S ribosomal protein L3 [Streptococcus anginosus F0211] Length = 208 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 129/212 (60%), Gaps = 6/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVVEAAPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFAAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+ Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIA 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ +IL+KG VPGAKK S I ++ + K+ Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKA 206 >gi|256370780|ref|YP_003108605.1| 50S ribosomal protein L3 [Candidatus Sulcia muelleri SMDSEM] gi|256009572|gb|ACU52932.1| 50S ribosomal subunit protein L3 [Candidatus Sulcia muelleri SMDSEM] Length = 205 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 80/207 (38%), Positives = 129/207 (62%), Gaps = 5/207 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ +G ++P T++ C V+ +TL K+GY + Q+G E K+K +K Sbjct: 3 GIIGKKIGMTSFFDEKGLKVPCTIIVAGPCLVLQKKTLKKDGYNSYQIGFEEKKIKKTNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 + G F +PKKK+ EF ++K+ L G + F +LVD+TG + GKGF G Sbjct: 63 SLLGNFKKFKSTPKKKIVEFSLKKE---LKSGDIIKVDIFNENELVDITGFSKGKGFQGV 119 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH F G+ +HG +R+ GS G DP RVFK +MAGRMG +VT+K L+++ + Sbjct: 120 IKRHGFSGVGEKSHGQHNRYRAPGSIGAGSDPSRVFKGTRMAGRMGNKKVTIKKLKILKI 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDS 209 D + L+++KG VPG KNS++ ++ + Sbjct: 180 DLLKNLLIIKGSVPGT-KNSFLKIKKT 205 >gi|256371215|ref|YP_003109039.1| ribosomal protein L3 [Acidimicrobium ferrooxidans DSM 10331] gi|256007799|gb|ACU53366.1| ribosomal protein L3 [Acidimicrobium ferrooxidans DSM 10331] Length = 213 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 86/210 (40%), Positives = 118/210 (56%), Gaps = 2/210 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R V K+GMT V+ R +PVTV+ + VV +T +++GY AVQV G K + + Sbjct: 3 RKTFVGEKVGMTQVWTEGDRAVPVTVIKVVPTWVVRTKTPERDGYEAVQVAVGRVKPQRL 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 S+P+ G F + V ++ E R+ P G G +DV G++ G GFS Sbjct: 63 SRPVAGQFEARGVEAGARIMELRLDGASSFEP-GDQIGIEGIEPGMRLDVVGVSKGHGFS 121 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF G A HG HR+ GS G P RVFK +MAG+ G RVT+ NLEVV Sbjct: 122 GGMKRHNFRGQGAAHGNHKKHRAPGSIGACATPARVFKGTRMAGQYGTERVTIHNLEVVR 181 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 + +R L+LVKG +PG + + ++VRDS K Sbjct: 182 AEPERQLVLVKGSIPGP-RGAIVVVRDSVK 210 >gi|297623274|ref|YP_003704708.1| 50S ribosomal protein L3 [Truepera radiovictrix DSM 17093] gi|297164454|gb|ADI14165.1| 50S ribosomal protein L3 [Truepera radiovictrix DSM 17093] Length = 206 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 86/195 (44%), Positives = 115/195 (58%), Gaps = 6/195 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ K+GMT V+ + R +PVTV+ C VV +T + +GY AVQ+G + K +K Sbjct: 3 GLLGTKVGMTQVWQGD-RLVPVTVVLAGPCPVVQRKTPETDGYSAVQLGWIAKRDKVATK 61 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G VS ++ L EFR D P G + F GQ VDVTG + G+G +G Sbjct: 62 PELGHAKKAGVSAQRHLVEFR-----DYDPEGDTVTVEIFKPGQKVDVTGTSKGRGTAGV 116 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR NF GL A+HGV HR+ GS G R+ PGRV+K K+MAGR G RVT LE++ V Sbjct: 117 MKRWNFAGLPASHGVKKKHRAPGSIGQRKFPGRVYKGKRMAGRYGNERVTTLGLELLEVR 176 Query: 184 DKRGLILVKGCVPGA 198 L+L+KG +PGA Sbjct: 177 PDDNLLLIKGSIPGA 191 >gi|78780035|ref|YP_398147.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9312] gi|109893536|sp|Q318I4|RL3_PROM9 RecName: Full=50S ribosomal protein L3 gi|78713534|gb|ABB50711.1| LSU ribosomal protein L3P [Prochlorococcus marinus str. MIT 9312] Length = 217 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 77/197 (39%), Positives = 124/197 (62%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +G +PVT++ C+V +T +GY AVQ+G G +K K+ Sbjct: 1 MSIGILGKKLGMSQLFDDKGNAVPVTLIEAGPCRVTQLKTTTLDGYSAVQIGYGLSKDKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G K L E+RV++ +G+ + F VGQ VD++G ++G+GF Sbjct: 61 INKPEKGHLLKSGEELLKHLKEYRVEETTSY-EIGNQITVKNFEVGQKVDISGKSMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F +HG S +HR+ GSTG PGR++ K+MAGR GG ++T K L V+ Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVL 178 Query: 181 SVDDKRGLILVKGCVPG 197 +DD++ L+++KG VPG Sbjct: 179 KIDDQKNLLVIKGSVPG 195 >gi|283853153|ref|ZP_06370406.1| ribosomal protein L3 [Desulfovibrio sp. FW1012B] gi|283571411|gb|EFC19418.1| ribosomal protein L3 [Desulfovibrio sp. FW1012B] Length = 210 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 86/204 (42%), Positives = 118/204 (57%), Gaps = 2/204 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT ++ +G IPVTV+ C V +T +K+GY A+Q+G + + V+K Sbjct: 6 GILGRKLGMTRIFGDDGSIIPVTVIEAGPCPVTQVKTAEKDGYNAMQIGFDQIPERKVNK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G + L E R+ G + F G+ V VTG +IGKGF+G Sbjct: 66 PEKGHLDKAGRGYYRVLKEIRLD-GPSAFEQGMDVTVDIFAPGETVKVTGTSIGKGFAGV 124 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR NF GL+ THG +HRS GS G +PG+V K KKMAG MG VT+ +E+V V Sbjct: 125 MKRWNFAGLKKTHGTEKAHRSGGSIGNNTEPGKVMKGKKMAGHMGARTVTMLGIEIVDVR 184 Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207 + LILVKG VPG +N ++VR Sbjct: 185 PEMNLILVKGQVPGP-RNCVVMVR 207 >gi|325261494|ref|ZP_08128232.1| 50S ribosomal protein L3 [Clostridium sp. D5] gi|324032948|gb|EGB94225.1| 50S ribosomal protein L3 [Clostridium sp. D5] Length = 226 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 90/228 (39%), Positives = 125/228 (54%), Gaps = 19/228 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK- 59 M+ ++A K+GMT ++N +G PVTVL C V +T D +GY AVQVG + K K Sbjct: 1 MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTADNDGYSAVQVGFADKKEKI 60 Query: 60 ---------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V+K +G F VS K+ + EFR + ++ + F Sbjct: 61 VTKDKSGKKEIAHRNGVTKAEKGHFDKAGVSGKRYVKEFRFENAEEYT-LAQEIKADIFE 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G +D T ++ GKGF GA+KRHN THG S HR GS G DP +VFK KKM Sbjct: 120 AGDKIDATAVSKGKGFQGAIKRHNQSRGPMTHG-SKFHRHAGSNGSASDPSKVFKGKKMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G+MG ++TV+NLEVV VD + L+LVKG VPG KK + ++++ K+ Sbjct: 179 GQMGNKKITVQNLEVVRVDAENNLLLVKGSVPGPKK-CLVTLKETVKA 225 >gi|295135701|ref|YP_003586377.1| 50S ribosomal protein L3 [Zunongwangia profunda SM-A87] gi|294983716|gb|ADF54181.1| 50S ribosomal protein L3 [Zunongwangia profunda SM-A87] Length = 203 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 82/206 (39%), Positives = 127/206 (61%), Gaps = 6/206 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C + RT + +GY A+Q+G + K N Sbjct: 2 SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCVITQVRTNEVDGYEALQLGFDDKKTAN-- 59 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G V+ ++K+ EF+ + D +G + +F G+ VD++G + GKGF G Sbjct: 60 KAATGHAKKAGVAAQRKVVEFQGFEGD--YKLGDTINVEHFKEGEFVDISGTSKGKGFQG 117 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG+ ++THG R+ GS G P RVFK +MAGRMGG +V V+NL V+ Sbjct: 118 VVKRHGFGGVGQSTHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGEKVKVENLRVLK 177 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L++VKGCVPG KNS++++R Sbjct: 178 VVAEKNLLVVKGCVPG-HKNSYVIIR 202 >gi|326203896|ref|ZP_08193758.1| 50S ribosomal protein L3 [Clostridium papyrosolvens DSM 2782] gi|325985994|gb|EGD46828.1| 50S ribosomal protein L3 [Clostridium papyrosolvens DSM 2782] Length = 212 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 87/213 (40%), Positives = 128/213 (60%), Gaps = 4/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT +++ G IPVTV+ VV +T++ +GY A++VG + K Sbjct: 1 MKKAMLGKKIGMTQIFDENGLVIPVTVVEAGPLTVVQKKTVETDGYNALKVGYQKVAEKK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG-SVFSPSYFTVGQLVDVTGMTIGKG 119 +SKP G FS ++P K L EFR++ D VG + + F G +DV+G++ GKG Sbjct: 61 LSKPALGQFSKTKLAPMKYLREFRLE-DISSYEVGQEIKAEDMFQSGDKIDVSGLSKGKG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR+ G THG S+ HR GS +P RVFK KK+ G MG + TV+NLEV Sbjct: 120 FQGTIKRYGQKGGPKTHG-SMYHRRVGSMSANTNPARVFKGKKLPGHMGMDNTTVQNLEV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R LILVKG +PG K ++++ + KS Sbjct: 179 VRVDAERNLILVKGALPGP-KGGLLVIKSTVKS 210 >gi|113953361|ref|YP_729667.1| 50S ribosomal protein L3 [Synechococcus sp. CC9311] gi|123031873|sp|Q0ID05|RL3_SYNS3 RecName: Full=50S ribosomal protein L3 gi|113880712|gb|ABI45670.1| ribosomal protein L3 [Synechococcus sp. CC9311] Length = 218 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 78/209 (37%), Positives = 127/209 (60%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ +G+ +PVT++ C++ ++ + +GY AVQ+G GE + K Sbjct: 1 MSIGILGKKLGMSQFFDEQGKAVPVTLIEAGPCRITQLKSSETDGYQAVQIGFGEIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + + L E+RV D D + +G + F GQ VDV+G T+G+GF Sbjct: 61 INKPAKGHLAKSGEDLVRHLCEYRVD-DLDGIQLGGAVTVGDFAAGQKVDVSGDTMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F THG S +HR GS G PGR++ K+M+GR GG ++T + L ++ Sbjct: 120 AGLQKRHGFSRGPMTHG-SKNHRQPGSIGAGTTPGRIYPGKRMSGRYGGKKITTRGLTIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +D +R L++VKG VPG K S + +R + Sbjct: 179 KIDSERNLLVVKGSVPG-KPGSLLNIRPA 206 >gi|327438278|dbj|BAK14643.1| ribosomal protein L3 [Solibacillus silvestris StLB046] Length = 209 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 128/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ ++++ +GY A+Q+G + +VK Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKSVETDGYEAIQLGFEDKRVKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EFR + VG F G ++DVTG+T GKGF Sbjct: 61 SNKPEQGHVAKANTAPKRFIREFR-NLEAATYEVGQEVKVEIFAEGDVIDVTGVTKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH +HG S HR GS G P RVFK KK+ G+MGG VT++NLE+V Sbjct: 120 QGVIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKQKKLPGQMGGTVVTIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPG+KK + + V+ + KS Sbjct: 178 KVDVERNLLLVKGNVPGSKK-ALVTVKTAIKS 208 >gi|320352917|ref|YP_004194256.1| 50S ribosomal protein L3P [Desulfobulbus propionicus DSM 2032] gi|320121419|gb|ADW16965.1| LSU ribosomal protein L3P [Desulfobulbus propionicus DSM 2032] Length = 210 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 85/197 (43%), Positives = 119/197 (60%), Gaps = 3/197 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT VY+ GR IPVTV+ C ++ +T++K GY A+QVG E K ++K Sbjct: 6 GILGRKLGMTRVYDENGRSIPVTVIEAGPCTILQKKTVEKEGYNAIQVGFLEKKETRMNK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF-TVGQLVDVTGMTIGKGFSG 122 P G + EFRV + D+ VG + S ++G LVD++G + G+GF G Sbjct: 66 PEVGHCKRSGGKGFYYIKEFRVT-NPDVYEVGQQITVSEIVSIGDLVDISGKSKGRGFQG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH F G R THG S HR+ GS GC P RV K KK+ GRMG +T KNL ++ + Sbjct: 125 VIKRHGFAGGRTTHG-SDFHRAPGSIGCSAWPSRVLKGKKLPGRMGNESMTQKNLRIIDI 183 Query: 183 DDKRGLILVKGCVPGAK 199 ++ ++LV+G VPGAK Sbjct: 184 RNEDNVLLVRGTVPGAK 200 >gi|257125036|ref|YP_003163150.1| ribosomal protein L3 [Leptotrichia buccalis C-1013-b] gi|257048975|gb|ACV38159.1| ribosomal protein L3 [Leptotrichia buccalis C-1013-b] Length = 208 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 85/208 (40%), Positives = 124/208 (59%), Gaps = 4/208 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT ++ E + IPVTV+ + +T +K GY A+ + G+ + KN +KP Sbjct: 2 ILGKKIGMTQIFEDE-KLIPVTVIEAGTNFITQIKTEEKEGYNAITLAYGDKREKNTTKP 60 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G F V+PK+ L EF+V D +G + VD++G + GKG +G M Sbjct: 61 ELGIFKKAGVTPKRFLKEFKVANPADF-ALGQEIKVDVLEGIEFVDISGTSKGKGTAGVM 119 Query: 125 KRHNFGGLRATHGVSISHRSHGS-TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 KRHNFGG RA+HGVS +HR GS G V K KKMAGR+G +VTV+NL+V+ D Sbjct: 120 KRHNFGGNRASHGVSRNHRLGGSNAGGAASNSNVPKGKKMAGRLGAEKVTVQNLQVIKFD 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 + L+LVKG VPG KN +++++ S K Sbjct: 180 VENSLLLVKGAVPGP-KNGYLVIKKSVK 206 >gi|195952643|ref|YP_002120933.1| ribosomal protein L3 [Hydrogenobaculum sp. Y04AAS1] gi|226730524|sp|B4U744|RL3_HYDS0 RecName: Full=50S ribosomal protein L3 gi|195932255|gb|ACG56955.1| ribosomal protein L3 [Hydrogenobaculum sp. Y04AAS1] Length = 232 Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 85/196 (43%), Positives = 118/196 (60%), Gaps = 2/196 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGM V+ +G IPVT + ++ VV ++ + +GY A+QVG+ K K Sbjct: 3 GLIGKKLGMMRVFLNDGTAIPVTAIKVEPNYVVYIKSSETDGYNAIQVGSIPLKQSRFKK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 PM G F N++P K L EFRV D +G F+ G+LVD+ G + G+GF+G Sbjct: 63 PMVGHFKKANLTPLKYLKEFRVD-DVSSFALGQELGVDIFSPGELVDIVGRSKGRGFTGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR +FGG +HG HR+ GS G R DPGRV+K+K+MAGR G + V+ L VV V Sbjct: 122 MKRWDFGGFPKSHGHRY-HRAVGSVGNRTDPGRVWKSKRMAGRHGNETIRVQALVVVDVL 180 Query: 184 DKRGLILVKGCVPGAK 199 +G+ILV G VPG K Sbjct: 181 KDKGIILVNGSVPGHK 196 >gi|212704583|ref|ZP_03312711.1| hypothetical protein DESPIG_02645 [Desulfovibrio piger ATCC 29098] gi|212671982|gb|EEB32465.1| hypothetical protein DESPIG_02645 [Desulfovibrio piger ATCC 29098] Length = 209 Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 83/206 (40%), Positives = 119/206 (57%), Gaps = 2/206 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 + G++ RKLGMT ++ +G +PVTV+ C V +T++ +GY A+Q+ E K K+V Sbjct: 4 KMGILGRKLGMTRIFAGDGAAVPVTVIQAGPCPVTQVKTVETDGYNALQIALTEDKEKHV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SK M+G F+ ++L E R++ ++ P G + F G +V VT +IGKG+ Sbjct: 64 SKAMKGHFAKAGTGLYRELREIRLENAPEMEP-GQELTVEMFATGDVVKVTAKSIGKGYQ 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G M+R NF G + THG HR++GS G PG VFK +KMAG G VT L +V Sbjct: 123 GRMRRWNFAGSKDTHGCEKVHRNNGSIGNNTFPGHVFKGRKMAGHWGNETVTEMGLVIVD 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V +ILVKG VPG KN +L+R Sbjct: 183 VRPADNVILVKGSVPGP-KNGLVLIR 207 >gi|71276484|ref|ZP_00652759.1| Ribosomal protein L3 [Xylella fastidiosa Dixon] gi|71162661|gb|EAO12388.1| Ribosomal protein L3 [Xylella fastidiosa Dixon] Length = 186 Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 86/179 (48%), Positives = 112/179 (62%), Gaps = 2/179 (1%) Query: 34 QVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLL 92 +VV +T D +GY A+QV G + V+KP G F+ V + L+EFRV+K Sbjct: 8 RVVQIKTSDVDGYDAIQVTVGSRRSVLVNKPESGHFAKAKVEAGRGLWEFRVEKTQLGSY 67 Query: 93 PVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 VGS S F VGQ VD+ G+T GKGF G +KRHNF ATHG S+SHR+ GS G RQ Sbjct: 68 SVGSEVGLSIFAVGQKVDIQGITKGKGFQGTIKRHNFRMGDATHGNSLSHRAPGSLGQRQ 127 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 PGRVF KKM+G MG R +V+NLEV+ +D +R LI V+G +PGA +L+R + K Sbjct: 128 TPGRVFPGKKMSGHMGAVRQSVQNLEVIKIDVERFLIAVRGAIPGASGGD-VLIRSASK 185 >gi|297618384|ref|YP_003703543.1| 50S ribosomal protein L3 [Syntrophothermus lipocalidus DSM 12680] gi|297146221|gb|ADI02978.1| 50S ribosomal protein L3 [Syntrophothermus lipocalidus DSM 12680] Length = 212 Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 82/212 (38%), Positives = 129/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 + G++ KLGMT +++ R VTV+ C V+ +T+ +GY A+QVG G K Sbjct: 5 VEKGLLGVKLGMTQLFDENDRATAVTVVEAGPCIVLQKKTVATDGYNAIQVGFGSVKESK 64 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP++G ++ NV P + + EFRV+ DD VG F G ++DVTG++ GKGF Sbjct: 65 ITKPLKGHLANANVKPVRFIREFRVENIDD-YQVGQEIRVDIFKEGDIIDVTGISKGKGF 123 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNF HG S HR G+ G + P RVFK +K+ GR+GG +VTV+ L VV Sbjct: 124 AGGIKRHNFQRGAMAHG-SKYHRRPGALGAK-GPARVFKGRKLPGRLGGEKVTVQRLRVV 181 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ ++L+KG +PG ++ + +++S K+ Sbjct: 182 KVYPEKNILLIKGAIPGPRR-GLVTIKNSAKA 212 >gi|33863999|ref|NP_895559.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9313] gi|42559599|sp|Q7V542|RL3_PROMM RecName: Full=50S ribosomal protein L3 gi|33635583|emb|CAE21907.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9313] Length = 218 Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 81/209 (38%), Positives = 127/209 (60%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ +GR IPVT++ C++ +T + +GY AVQ+G G+ + K Sbjct: 1 MSIGILGKKLGMSQFFDDQGRAIPVTLIEAGPCRITQLKTSEIDGYAAVQIGFGDTREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + K L E+RV+ + L +G+ + F GQ VDV+G T+G+GF Sbjct: 61 INKPSKGHLTKSGEVLLKHLREYRVEGLEGL-ELGAAITVGSFEAGQKVDVSGDTMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F +HG S +HR GSTG PGR++ K+MAGR GG + T + L ++ Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKRTTRGLTIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VD R L++VKG VPG K + + +R + Sbjct: 179 KVDSNRNLLVVKGSVPG-KPGALLNIRPA 206 >gi|88704378|ref|ZP_01102092.1| Ribosomal protein L3 [Congregibacter litoralis KT71] gi|88701429|gb|EAQ98534.1| Ribosomal protein L3 [Congregibacter litoralis KT71] Length = 184 Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 80/170 (47%), Positives = 106/170 (62%), Gaps = 1/170 (0%) Query: 42 DKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS 101 D +GY ++QV AG K VSK G F+ V + L+EFR+ +++ VG+ + Sbjct: 15 DSDGYRSIQVTAGSRKAAKVSKSEAGLFAKAGVEAGRGLWEFRLSAEEEGFEVGAELTVE 74 Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F GQ VDV G + GKGF G +KR NF ATHG S+SHR+ GS G Q PGRVFK K Sbjct: 75 RFEEGQKVDVAGKSKGKGFQGVIKRWNFSMQDATHGNSLSHRAPGSIGQCQTPGRVFKGK 134 Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 KM+G+MG VTV+ LE+V VD +R L+L+KG VPGA ++VR + K Sbjct: 135 KMSGQMGNTNVTVQGLEIVRVDAERNLLLIKGAVPGAPGGD-VVVRPAVK 183 >gi|256544506|ref|ZP_05471879.1| 50S ribosomal protein L3 [Anaerococcus vaginalis ATCC 51170] gi|256399831|gb|EEU13435.1| 50S ribosomal protein L3 [Anaerococcus vaginalis ATCC 51170] Length = 209 Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 87/199 (43%), Positives = 122/199 (61%), Gaps = 3/199 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+S + K+GMT V + +G PVTVL D +V ++ + +GY ++Q+G + K KN Sbjct: 1 MKS-IFTTKVGMTQVIDEDGVVTPVTVLKADENVIVQVKSEEVDGYNSIQIGYHDKKEKN 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V KP++G F S K+ L E R+ + +L P G S F G+LVD+T ++ GKG Sbjct: 60 VKKPIKGHFDKAGASYKRFLREVRLDEKSELNP-GDTLSVDQFEEGELVDITAISKGKGT 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR N+G A+HG S SHR G+ DP RVFK +K +G+MG RVTV+NL+VV Sbjct: 119 QGAIKRWNYGRGPASHG-SKSHRVAGARAAGSDPARVFKGRKGSGKMGHERVTVQNLKVV 177 Query: 181 SVDDKRGLILVKGCVPGAK 199 V+ + ILVKG VPG K Sbjct: 178 KVNTEDSYILVKGAVPGPK 196 >gi|159904219|ref|YP_001551563.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9211] gi|226730549|sp|A9BCP7|RL3_PROM4 RecName: Full=50S ribosomal protein L3 gi|159889395|gb|ABX09609.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9211] Length = 219 Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 82/211 (38%), Positives = 128/211 (60%), Gaps = 7/211 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ +GR +PVT++ C++ ++L +GY AVQ+G G + K Sbjct: 1 MSIGILGKKLGMSQFFDDKGRSVPVTLIEAGPCRITQLKSLATDGYSAVQIGYGFTREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118 V+KP +G S + L E+RV DDL +G+ + F GQ VDV+G ++G+ Sbjct: 61 VNKPFKGHLSKSGEGFLRHLHEYRV---DDLGVYELGAKITVGNFEAGQKVDVSGNSMGR 117 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF+G KRH+F +HG S +HR GSTG PGR++ K+MAGR GG ++T + L Sbjct: 118 GFAGYQKRHSFSRGPMSHG-SKNHRQPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLT 176 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 ++ +D R L++VKG VPG K S + +R + Sbjct: 177 IMKIDSDRNLLVVKGSVPG-KPGSLLNIRPA 206 >gi|242620043|ref|YP_003002047.1| 50S ribosomal protein L3 [Aureococcus anophagefferens] gi|239997288|gb|ACS36811.1| 50S ribosomal protein L3 [Aureococcus anophagefferens] Length = 210 Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 82/201 (40%), Positives = 117/201 (58%), Gaps = 2/201 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT + + G +PVT+L C V +T++ +GY A Q+G + K Sbjct: 1 MPLGILGNKIGMTQIVDDLGNLVPVTILRAGPCTVTQIKTVETDGYSAAQLGYAQVTSKV 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP G V + L E+++ D L +G F+ G +VDVTG +IGKGF Sbjct: 61 LTKPQIGHLEKVGAPLLRYLHEYKIS-DTSELSLGQTIGVDIFSAGSVVDVTGKSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KR+NFG THG S +HR+ GS G PGRV+ KKMAG +G +VT+K L+V+ Sbjct: 120 AGLQKRYNFGRGPMTHG-SKNHRAPGSIGAGTTPGRVYPGKKMAGHLGAKQVTIKKLKVL 178 Query: 181 SVDDKRGLILVKGCVPGAKKN 201 VD + LI+VKG VPG N Sbjct: 179 IVDAENNLIIVKGAVPGKPGN 199 >gi|126662264|ref|ZP_01733263.1| 50S ribosomal protein L3 [Flavobacteria bacterium BAL38] gi|126625643|gb|EAZ96332.1| 50S ribosomal protein L3 [Flavobacteria bacterium BAL38] Length = 205 Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 87/206 (42%), Positives = 128/206 (62%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ RK+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G + K Sbjct: 2 SGLIGRKIGMTSIFDENGKNIPCTVIECGPCVVTQVRTNEVDGYSAIQLGFDDKAEKRSI 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F + KKK+ EF+ +++ +G V + F G+ VDV G++ GKGF G Sbjct: 62 KAELGHFKKAGTAAKKKVVEFKGFEEE--YKLGDVIAVDLFAEGEFVDVLGVSKGKGFQG 119 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG+ +ATHG R+ GS G P RVFK +MAGRMGG+ VTV+NL V+ Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGGDNVTVQNLRVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L++VKGCVPG KNS+++++ Sbjct: 180 VVGEKNLLVVKGCVPG-HKNSYVIIQ 204 >gi|322388401|ref|ZP_08062004.1| 50S ribosomal protein L3 [Streptococcus infantis ATCC 700779] gi|321140714|gb|EFX36216.1| 50S ribosomal protein L3 [Streptococcus infantis ATCC 700779] Length = 208 Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 129/212 (60%), Gaps = 6/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNVEGLEVGAEITVETFAAGDIVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFK K +AGRMGG+RVT++NLEVV Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ +IL+KG VPGAKK S I ++ + K+ Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKA 206 >gi|206602675|gb|EDZ39156.1| Ribosomal protein L3 [Leptospirillum sp. Group II '5-way CG'] Length = 207 Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 79/202 (39%), Positives = 124/202 (61%), Gaps = 4/202 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RKLGMT +Y G+ +PVT++ C+++ +T +K GY A Q+G K+++KP Sbjct: 4 LLGRKLGMTQIYLPSGQAVPVTIVEAGPCEILQVKTSEKEGYSAAQIGYFPISPKHLNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 RG + + + EF+V+++ GS+ + F G +D+TG + GKGF+G M Sbjct: 64 ERGHQQKYAKNLYRYVREFKVEENTQ--SPGSILTVEIFQEGDSLDITGQSKGKGFAGVM 121 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH+F G ATHG S+ HR GS G P RV KNKK+ G MG R+TVKNL++++V Sbjct: 122 KRHHFRGGDATHG-SMFHREPGSIGSSAYPSRVLKNKKLPGHMGDKRITVKNLKLIAVKP 180 Query: 185 KRGLILVKGCVPGAKKNSWILV 206 + L+ +KG +PG+ S+++V Sbjct: 181 EANLLFIKGAIPGS-NGSFVVV 201 >gi|289435898|ref|YP_003465770.1| hypothetical protein lse_2537 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172142|emb|CBH28688.1| rplC [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 209 Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 85/212 (40%), Positives = 128/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY AVQ+G + + K Sbjct: 1 MTKGILGRKVGMTQVFTENGELIPVTVIEAAQNVVLQKKTVETDGYEAVQIGFEDKRAKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EFR + D +G+ F G ++D TG++ GKGF Sbjct: 61 SNKPEQGHVAKANTTPKRFIREFR-DVNLDEYEIGAEVKVDVFAEGDIIDATGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK + GRMGG ++T++NLE+V Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQITIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++ ++LVKG VPGAKK + + ++ + K+ Sbjct: 178 KVDVEKNVLLVKGNVPGAKK-ALVQIKTATKA 208 >gi|309389933|gb|ADO77813.1| LSU ribosomal protein L3P [Halanaerobium praevalens DSM 2228] Length = 206 Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 90/200 (45%), Positives = 121/200 (60%), Gaps = 4/200 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ +KLGMT + G +PVTV+ C V +T +K+GY +VQ+G GE K Sbjct: 1 MAKAILGKKLGMTQYFKDNGELVPVTVVEAGPCVVTQIKTTEKDGYNSVQLGFGEVKKHR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP G F S N+ PKK L EF+ D L GS F VG+ +DV+G++ GKGF Sbjct: 61 LNKPELGQFESRNLEPKKHLREFKGL--DMELSEGSEIKADIFEVGEKIDVSGISKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR N THG S HR+ GS G D RV+K KM GRMG +RVT +NLE+V Sbjct: 119 AGNIKRWNHHRGPMTHG-SHFHRAPGSIGA-VDARRVYKGFKMPGRMGHDRVTERNLEIV 176 Query: 181 SVDDKRGLILVKGCVPGAKK 200 VD +R ++L+ G VPGAKK Sbjct: 177 KVDLERNVLLIAGPVPGAKK 196 >gi|27904942|ref|NP_778068.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|42559626|sp|Q89A68|RL3_BUCBP RecName: Full=50S ribosomal protein L3 gi|27904340|gb|AAO27173.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 214 Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 84/210 (40%), Positives = 126/210 (60%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT ++ EG PVT++ + ++ +T+ ++ Y AVQV G K + K Sbjct: 3 GLIGQKLGMTRIFTEEGTVYPVTIIKVKENRITQIKTISRDLYHAVQVTTGIKKSNKLLK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P G F V K L+EF++ + +G + F+ + VD+ G + GKGF G Sbjct: 63 PEIGHFLKSGVKIGKGLWEFKLTNSSINDFKIGQSLNLELFSNIKKVDIIGTSKGKGFCG 122 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR+ GS G Q PGRVFK KKMAG +G +RVTV+NL++V + Sbjct: 123 TVKRWNFHTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHLGNHRVTVQNLDIVKI 182 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D + +ILVKG VPG + I+++ + K+ Sbjct: 183 DLNQEIILVKGAVPGYSGGN-IIIKPAIKT 211 >gi|309799058|ref|ZP_07693311.1| ribosomal protein L3 [Streptococcus infantis SK1302] gi|308117293|gb|EFO54716.1| ribosomal protein L3 [Streptococcus infantis SK1302] Length = 208 Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 129/212 (60%), Gaps = 6/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNVEGLEVGAEITVETFAAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFK K +AGRMGG+RVT++NLEVV Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ +IL+KG VPGAKK S I ++ + K+ Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKA 206 >gi|303233143|ref|ZP_07319816.1| 50S ribosomal protein L3 [Atopobium vaginae PB189-T1-4] gi|302480728|gb|EFL43815.1| 50S ribosomal protein L3 [Atopobium vaginae PB189-T1-4] Length = 221 Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 87/207 (42%), Positives = 122/207 (58%), Gaps = 3/207 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M + ++ RK+GMT V++ +PVTV+ C V +T +GY A+Q+G GE K+ Sbjct: 16 MVTTILGRKIGMTQVWDENDNVVPVTVIQAGPCVVSQVKTKSSDGYDAIQIGFGEVSSKH 75 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM G F + NV P + L E RV+ ++ G + F VDVTG++ GKGF Sbjct: 76 VNKPMEGHFKAHNVEPLRHLCEVRVENGEE-HACGDTITVKDFADATAVDVTGVSKGKGF 134 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF HG S + R GS G PGRV K MAG MG R+TVKNL++V Sbjct: 135 QGTIKRWNFSSGPKAHG-SRNQREPGSIGQCAYPGRVRKGLHMAGHMGDERITVKNLKLV 193 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207 +D+++ L+LVKG VPG KN+ + +R Sbjct: 194 RIDEEQNLLLVKGAVPGG-KNALLTIR 219 >gi|15900145|ref|NP_344749.1| 50S ribosomal protein L3 [Streptococcus pneumoniae TIGR4] gi|15902232|ref|NP_357782.1| 50S ribosomal protein L3 [Streptococcus pneumoniae R6] gi|111658801|ref|ZP_01409432.1| hypothetical protein SpneT_02000098 [Streptococcus pneumoniae TIGR4] gi|116516725|ref|YP_815712.1| 50S ribosomal protein L3 [Streptococcus pneumoniae D39] gi|148983607|ref|ZP_01816926.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP3-BS71] gi|148987945|ref|ZP_01819408.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP6-BS73] gi|148992785|ref|ZP_01822428.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP9-BS68] gi|148996630|ref|ZP_01824348.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP11-BS70] gi|149001686|ref|ZP_01826659.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP14-BS69] gi|149005958|ref|ZP_01829687.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP18-BS74] gi|149011077|ref|ZP_01832382.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP19-BS75] gi|149017897|ref|ZP_01834356.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP23-BS72] gi|168483845|ref|ZP_02708797.1| ribosomal protein L3 [Streptococcus pneumoniae CDC1873-00] gi|168486024|ref|ZP_02710532.1| ribosomal protein L3 [Streptococcus pneumoniae CDC1087-00] gi|168489686|ref|ZP_02713885.1| ribosomal protein L3 [Streptococcus pneumoniae SP195] gi|168492162|ref|ZP_02716305.1| ribosomal protein L3 [Streptococcus pneumoniae CDC0288-04] gi|168493902|ref|ZP_02718045.1| ribosomal protein L3 [Streptococcus pneumoniae CDC3059-06] gi|168576364|ref|ZP_02722247.1| ribosomal protein L3 [Streptococcus pneumoniae MLV-016] gi|169833378|ref|YP_001693741.1| 50S ribosomal protein L3 [Streptococcus pneumoniae Hungary19A-6] gi|182683188|ref|YP_001834935.1| 50S ribosomal protein L3 [Streptococcus pneumoniae CGSP14] gi|194397396|ref|YP_002036910.1| 50S ribosomal protein L3 [Streptococcus pneumoniae G54] gi|221231113|ref|YP_002510265.1| 50S ribosomal protein L3 [Streptococcus pneumoniae ATCC 700669] gi|225853815|ref|YP_002735327.1| 50S ribosomal protein L3 [Streptococcus pneumoniae JJA] gi|225855974|ref|YP_002737485.1| 50S ribosomal protein L3 [Streptococcus pneumoniae P1031] gi|225858063|ref|YP_002739573.1| 50S ribosomal protein L3 [Streptococcus pneumoniae 70585] gi|225860251|ref|YP_002741760.1| 50S ribosomal protein L3 [Streptococcus pneumoniae Taiwan19F-14] gi|237649723|ref|ZP_04523975.1| 50S ribosomal protein L3 [Streptococcus pneumoniae CCRI 1974] gi|237821421|ref|ZP_04597266.1| 50S ribosomal protein L3 [Streptococcus pneumoniae CCRI 1974M2] gi|270292000|ref|ZP_06198215.1| ribosomal protein L3 [Streptococcus sp. M143] gi|289168732|ref|YP_003447001.1| 50S ribosomal protein L3 [Streptococcus mitis B6] gi|293364347|ref|ZP_06611073.1| 50S ribosomal protein L3 [Streptococcus oralis ATCC 35037] gi|298230366|ref|ZP_06964047.1| 50S ribosomal protein L3 [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255987|ref|ZP_06979573.1| 50S ribosomal protein L3 [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502023|ref|YP_003723963.1| 50S ribosomal protein L3 [Streptococcus pneumoniae TCH8431/19A] gi|303255095|ref|ZP_07341171.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS455] gi|303259261|ref|ZP_07345239.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP-BS293] gi|303261016|ref|ZP_07346965.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP14-BS292] gi|303263344|ref|ZP_07349267.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS397] gi|303265509|ref|ZP_07351409.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS457] gi|303267933|ref|ZP_07353735.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS458] gi|306825986|ref|ZP_07459322.1| 50S ribosomal protein L3 [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|306828783|ref|ZP_07461975.1| 50S ribosomal protein L3 [Streptococcus mitis ATCC 6249] gi|307066886|ref|YP_003875852.1| hypothetical protein SPAP_0257 [Streptococcus pneumoniae AP200] gi|307126429|ref|YP_003878460.1| 50S ribosomal protein L3 [Streptococcus pneumoniae 670-6B] gi|307702686|ref|ZP_07639638.1| 50S ribosomal protein L3 (BL3) [Streptococcus oralis ATCC 35037] gi|307704065|ref|ZP_07640994.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK597] gi|307709910|ref|ZP_07646357.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK564] gi|307711054|ref|ZP_07647476.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK321] gi|315612332|ref|ZP_07887245.1| 50S ribosomal protein L3 [Streptococcus sanguinis ATCC 49296] gi|322375039|ref|ZP_08049553.1| 50S ribosomal protein L3 [Streptococcus sp. C300] gi|322377230|ref|ZP_08051722.1| 50S ribosomal protein L3 [Streptococcus sp. M334] gi|322391199|ref|ZP_08064671.1| 50S ribosomal protein L3 [Streptococcus peroris ATCC 700780] gi|331267136|ref|YP_004326766.1| 50S ribosomal protein L3 [Streptococcus oralis Uo5] gi|42559631|sp|Q8CWV8|RL3_STRR6 RecName: Full=50S ribosomal protein L3 gi|42559682|sp|Q97SV5|RL3_STRPN RecName: Full=50S ribosomal protein L3 gi|122279402|sp|Q04MN6|RL3_STRP2 RecName: Full=50S ribosomal protein L3 gi|226730574|sp|B5E6F5|RL3_STRP4 RecName: Full=50S ribosomal protein L3 gi|226730575|sp|B1I8J8|RL3_STRPI RecName: Full=50S ribosomal protein L3 gi|226730576|sp|B2IS40|RL3_STRPS RecName: Full=50S ribosomal protein L3 gi|254803693|sp|C1CAL2|RL3_STRP7 RecName: Full=50S ribosomal protein L3 gi|254803694|sp|B8ZKF7|RL3_STRPJ RecName: Full=50S ribosomal protein L3 gi|254803696|sp|C1CC06|RL3_STRZJ RecName: Full=50S ribosomal protein L3 gi|254803697|sp|C1CI97|RL3_STRZP RecName: Full=50S ribosomal protein L3 gi|254803698|sp|C1CP88|RL3_STRZT RecName: Full=50S ribosomal protein L3 gi|14971677|gb|AAK74389.1| ribosomal protein L3 [Streptococcus pneumoniae TIGR4] gi|15457732|gb|AAK98992.1| 50S Ribosomal protein L3 [Streptococcus pneumoniae R6] gi|116077301|gb|ABJ55021.1| ribosomal protein L3 [Streptococcus pneumoniae D39] gi|147757205|gb|EDK64244.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP11-BS70] gi|147760144|gb|EDK67133.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP14-BS69] gi|147762314|gb|EDK69275.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP18-BS74] gi|147764713|gb|EDK71643.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP19-BS75] gi|147923754|gb|EDK74866.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP3-BS71] gi|147926409|gb|EDK77482.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP6-BS73] gi|147928511|gb|EDK79526.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP9-BS68] gi|147931461|gb|EDK82439.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP23-BS72] gi|168995880|gb|ACA36492.1| ribosomal protein L3 [Streptococcus pneumoniae Hungary19A-6] gi|172042867|gb|EDT50913.1| ribosomal protein L3 [Streptococcus pneumoniae CDC1873-00] gi|182628522|gb|ACB89470.1| 50S ribosomal protein L3 [Streptococcus pneumoniae CGSP14] gi|183570883|gb|EDT91411.1| ribosomal protein L3 [Streptococcus pneumoniae CDC1087-00] gi|183571866|gb|EDT92394.1| ribosomal protein L3 [Streptococcus pneumoniae SP195] gi|183573583|gb|EDT94111.1| ribosomal protein L3 [Streptococcus pneumoniae CDC0288-04] gi|183576220|gb|EDT96748.1| ribosomal protein L3 [Streptococcus pneumoniae CDC3059-06] gi|183577906|gb|EDT98434.1| ribosomal protein L3 [Streptococcus pneumoniae MLV-016] gi|194357063|gb|ACF55511.1| 50S ribosomal protein L3 [Streptococcus pneumoniae G54] gi|220673573|emb|CAR68059.1| 50S ribosomal protein L3 [Streptococcus pneumoniae ATCC 700669] gi|225720422|gb|ACO16276.1| ribosomal protein L3 [Streptococcus pneumoniae 70585] gi|225722972|gb|ACO18825.1| ribosomal protein L3 [Streptococcus pneumoniae JJA] gi|225725081|gb|ACO20933.1| ribosomal protein L3 [Streptococcus pneumoniae P1031] gi|225726716|gb|ACO22567.1| ribosomal protein L3 [Streptococcus pneumoniae Taiwan19F-14] gi|270279528|gb|EFA25370.1| ribosomal protein L3 [Streptococcus sp. M143] gi|288908299|emb|CBJ23141.1| 50S ribosomal protein L3 [Streptococcus mitis B6] gi|291317193|gb|EFE57620.1| 50S ribosomal protein L3 [Streptococcus oralis ATCC 35037] gi|298237618|gb|ADI68749.1| 50S ribosomal protein L3 [Streptococcus pneumoniae TCH8431/19A] gi|301793482|emb|CBW35855.1| 50S ribosomal protein L3 [Streptococcus pneumoniae INV104] gi|301799358|emb|CBW31893.1| 50S ribosomal protein L3 [Streptococcus pneumoniae OXC141] gi|301801153|emb|CBW33826.1| 50S ribosomal protein L3 [Streptococcus pneumoniae INV200] gi|302597925|gb|EFL64995.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS455] gi|302637853|gb|EFL68339.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP14-BS292] gi|302639679|gb|EFL70136.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP-BS293] gi|302642629|gb|EFL72974.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS458] gi|302644949|gb|EFL75196.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS457] gi|302647117|gb|EFL77341.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS397] gi|304428961|gb|EFM32049.1| 50S ribosomal protein L3 [Streptococcus mitis ATCC 6249] gi|304431702|gb|EFM34682.1| 50S ribosomal protein L3 [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|306408423|gb|ADM83850.1| hypothetical protein SPAP_0257 [Streptococcus pneumoniae AP200] gi|306483491|gb|ADM90360.1| ribosomal protein L3 [Streptococcus pneumoniae 670-6B] gi|307617016|gb|EFN96194.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK321] gi|307619281|gb|EFN98410.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK564] gi|307622355|gb|EFO01363.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK597] gi|307623802|gb|EFO02787.1| 50S ribosomal protein L3 (BL3) [Streptococcus oralis ATCC 35037] gi|315315313|gb|EFU63352.1| 50S ribosomal protein L3 [Streptococcus sanguinis ATCC 49296] gi|321145952|gb|EFX41341.1| 50S ribosomal protein L3 [Streptococcus peroris ATCC 700780] gi|321280539|gb|EFX57578.1| 50S ribosomal protein L3 [Streptococcus sp. C300] gi|321281943|gb|EFX58951.1| 50S ribosomal protein L3 [Streptococcus sp. M334] gi|326683808|emb|CBZ01426.1| 50S ribosomal protein L3 [Streptococcus oralis Uo5] gi|327390628|gb|EGE88968.1| 50S ribosomal protein L3 [Streptococcus pneumoniae GA04375] gi|332075874|gb|EGI86341.1| 50S ribosomal protein L3 [Streptococcus pneumoniae GA17570] gi|332076655|gb|EGI87117.1| 50S ribosomal protein L3 [Streptococcus pneumoniae GA17545] gi|332077510|gb|EGI87971.1| 50S ribosomal protein L3 [Streptococcus pneumoniae GA41301] Length = 208 Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 129/212 (60%), Gaps = 6/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNVEGLEVGAEITVETFAAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFK K +AGRMGG+RVT++NLEVV Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ +IL+KG VPGAKK S I ++ + K+ Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKA 206 >gi|294790411|ref|ZP_06755569.1| 50S ribosomal protein L3 [Scardovia inopinata F0304] gi|294458308|gb|EFG26661.1| 50S ribosomal protein L3 [Scardovia inopinata F0304] Length = 216 Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 84/210 (40%), Positives = 118/210 (56%), Gaps = 2/210 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R +V +KLGM+ V++ G +PVT++ + + +T + +GY AVQ+G G V Sbjct: 7 RKALVGKKLGMSQVWDDNGFFVPVTLVDVSTNIITAVKTDETDGYKAVQLGYGAIDPTKV 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G F+ V+P++ L E R + D P G F GQ VDVTG T GKGF+ Sbjct: 67 TKPLAGHFAKAGVTPRRHLVEVRTEDADSFEP-GQELPVDTFADGQRVDVTGTTKGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F R THG + R GS G P R+ K K+MAGRMG N T + L VVS Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGNNTHTTQGLTVVS 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 + G++ +KG VPG K + +LVR + K Sbjct: 186 SNVDSGILAIKGAVPGP-KGAIVLVRSAVK 214 >gi|317476356|ref|ZP_07935605.1| 50S ribosomal protein L3 [Bacteroides eggerthii 1_2_48FAA] gi|316907382|gb|EFV29087.1| 50S ribosomal protein L3 [Bacteroides eggerthii 1_2_48FAA] Length = 195 Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 81/197 (41%), Positives = 119/197 (60%), Gaps = 3/197 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V++ EG+ +P TV+ C V +T++K+GY AVQ+G + K K+ +KP+ G F Sbjct: 1 MTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYQAVQLGFQDKKEKHTTKPLMGHFKK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 V+PKK L EF+ + + L +G + F VDV G + GKGF G +KRH FGG Sbjct: 61 AGVTPKKHLAEFK--EFETELNLGDTVTVELFEGADFVDVVGTSKGKGFQGVVKRHGFGG 118 Query: 132 L-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190 + + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V + L+L Sbjct: 119 VGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKVIAEHNLLL 178 Query: 191 VKGCVPGAKKNSWILVR 207 +KG VPG K + I+ + Sbjct: 179 IKGSVPGCKGSIVIIEK 195 >gi|260584416|ref|ZP_05852163.1| 50S ribosomal protein L3 [Granulicatella elegans ATCC 700633] gi|260157934|gb|EEW93003.1| 50S ribosomal protein L3 [Granulicatella elegans ATCC 700633] Length = 210 Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 86/212 (40%), Positives = 127/212 (59%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT + G IPVTV+ + V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGKKVGMTQYFTEAGELIPVTVVEVTPNVVLQLKTIENDGYEAVQLGFDDLREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++P +G + N +PK+ + EF + + VG + F G +VDVTG + GKGF Sbjct: 61 SNRPAKGHVAKANATPKRFIREFNNVELSEY-EVGQEITVDVFKAGDIVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G P RVFK K + G+MGGNR+T++NLEVV Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGGASFPSRVFKGKALPGQMGGNRITIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R +IL+KG VPG+KK S + ++ + KS Sbjct: 179 KVDAERNVILIKGNVPGSKK-SLVEIKTAIKS 209 >gi|281358743|ref|ZP_06245219.1| 50S ribosomal protein L3 [Victivallis vadensis ATCC BAA-548] gi|281314770|gb|EFA98807.1| 50S ribosomal protein L3 [Victivallis vadensis ATCC BAA-548] Length = 218 Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 88/217 (40%), Positives = 124/217 (57%), Gaps = 5/217 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT VY+ +G IPVTV+ C V +T++++GY AVQ+G GE K KNV+K Sbjct: 3 GLIGRKVGMTQVYDEKGVLIPVTVVQAGPCVVTDVKTVERDGYSAVQLGFGERKAKNVTK 62 Query: 64 PMRGFFSSVNVSPKKK---LFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 G + V+ K L E R D+ G+V + F +DV G T G+GF Sbjct: 63 ARAGHLAKAGVTGDKLPSVLREIRTAAGDEAPAPGTVLNADVFEANDYLDVVGTTKGRGF 122 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G ++R+ FGG RA+HG + R GS GC + PG V K K+M G MG TV+NL+VV Sbjct: 123 QGVVRRYRFGGGRASHG-GVWTRRTGSIGCCEWPGNVIKGKRMPGHMGNVPRTVQNLQVV 181 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 V + ++LVKG +PGA +L+R + K K Sbjct: 182 RVMAEDNVLLVKGAIPGA-NGGILLIRSAIKKQTGAK 217 >gi|296875404|ref|ZP_06899478.1| 50S ribosomal protein L3 [Streptococcus parasanguinis ATCC 15912] gi|312866990|ref|ZP_07727201.1| 50S ribosomal protein L3 [Streptococcus parasanguinis F0405] gi|319945835|ref|ZP_08020085.1| 50S ribosomal protein L3 [Streptococcus australis ATCC 700641] gi|296433597|gb|EFH19370.1| 50S ribosomal protein L3 [Streptococcus parasanguinis ATCC 15912] gi|311097472|gb|EFQ55705.1| 50S ribosomal protein L3 [Streptococcus parasanguinis F0405] gi|319747900|gb|EFW00144.1| 50S ribosomal protein L3 [Streptococcus australis ATCC 700641] Length = 208 Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 129/212 (60%), Gaps = 6/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNVEGLEVGAEITVDTFEAGDIVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFK K +AGRMGG+RVT++NLEVV Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ +IL+KG VPGAKK S I ++ + K+ Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKA 206 >gi|213693088|ref|YP_002323674.1| ribosomal protein L3 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|254803655|sp|B7GNE0|RL3_BIFLI RecName: Full=50S ribosomal protein L3 gi|213524549|gb|ACJ53296.1| ribosomal protein L3 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320459266|dbj|BAJ69887.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 213 Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 83/212 (39%), Positives = 118/212 (55%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R ++ +KLGM+ V++ G +PVT++ + V +T + +GY AVQ+G G V Sbjct: 4 RKALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKTEESDGYKAVQLGYGAIDPTKV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G F+ V+P++ L E R D D G + F G VDVTG T GKGF+ Sbjct: 64 TKPLAGHFAKAGVTPRRHLVEVRTD-DVDQFEAGQELAADLFEEGAEVDVTGTTKGKGFA 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F R THG + R GS G P R+ K K+MAGRMG T +NL +VS Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTATTQNLIIVS 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + G++ +KG +PG K +LVR + K A Sbjct: 183 ADVENGILAIKGAIPGP-KGGIVLVRSAVKGA 213 >gi|294055221|ref|YP_003548879.1| 50S ribosomal protein L3 [Coraliomargarita akajimensis DSM 45221] gi|293614554|gb|ADE54709.1| 50S ribosomal protein L3 [Coraliomargarita akajimensis DSM 45221] Length = 214 Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 122/212 (57%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT V++ R +PVTV+ C V +T +K+GY AVQ+G K Sbjct: 1 MKVALLGKKIGMTQVFDENNRLVPVTVIEAGPCPVTQVKTSEKDGYSAVQIGYRAQKEHR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SK G F V P +L EFRV + + L VG V + F GQ +DV G T G+GF Sbjct: 61 LSKAALGHFKKAGVEPLAELREFRVAAEGE-LNVGDVLTVEKFEAGQKIDVIGTTKGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR F G A+HG S+ HR GS G Q PG V K KKM G MG + TV+NL VV Sbjct: 120 QGVVKRWGFHGGPASHG-SMFHRRGGSYGMCQWPGHVIKGKKMPGHMGDKQRTVQNLTVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V + LILVKG +PG+ + + VR + K+ Sbjct: 179 KVLADKNLILVKGSIPGS-RGGLVTVRTAIKN 209 >gi|307708060|ref|ZP_07644528.1| ribosomal protein L3 [Streptococcus mitis NCTC 12261] gi|307615845|gb|EFN95050.1| ribosomal protein L3 [Streptococcus mitis NCTC 12261] Length = 208 Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 129/212 (60%), Gaps = 6/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVIEAAPNVVLQVKTVETDGYNAIQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNVEGLEVGAEITVETFAAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFK K +AGRMGG+RVT++NLEVV Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ +IL+KG VPGAKK S I ++ + K+ Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKA 206 >gi|315925256|ref|ZP_07921470.1| 50S ribosomal protein L3 [Pseudoramibacter alactolyticus ATCC 23263] gi|315621490|gb|EFV01457.1| 50S ribosomal protein L3 [Pseudoramibacter alactolyticus ATCC 23263] Length = 211 Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 88/215 (40%), Positives = 124/215 (57%), Gaps = 7/215 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT ++ +G +PVTV+ C VV +TL+ +GY AVQ+ G+ K KN Sbjct: 1 MKKAIIGKKIGMTQIFQEDGTVVPVTVVQAGPCTVVQKKTLENDGYEAVQLAYGDIKEKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V KP++G F V + L EFR+ D L G F G VDV+G + GKG+ Sbjct: 61 VVKPVKGHFDKYGVDYARTLREFRLD-DCASLEAGQKIKADVFEAGDKVDVSGKSKGKGY 119 Query: 121 SGAMKRHNFGGLRA--THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 +GA+KR +G R HG S HRS GS G P RV K K +AG+MG VT NLE Sbjct: 120 AGAIKR--WGQQRGPMAHG-SKYHRSAGSMGASAYPARVPKGKHLAGQMGNKNVTALNLE 176 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++ VD + L+L+KG VPG + + V+ S K+A Sbjct: 177 IIQVDAENNLLLIKGAVPGP-RGGVVSVKSSVKAA 210 >gi|317153958|ref|YP_004122006.1| 50S ribosomal protein L3 [Desulfovibrio aespoeensis Aspo-2] gi|316944209|gb|ADU63260.1| 50S ribosomal protein L3 [Desulfovibrio aespoeensis Aspo-2] Length = 210 Score = 148 bits (374), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 83/204 (40%), Positives = 121/204 (59%), Gaps = 2/204 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT ++ +G VTV+ C V+ +T DK GY A+Q+G + V+K Sbjct: 6 GILGKKLGMTRIFKEDGSVCCVTVIEAGPCPVMQIKTQDKEGYNALQLGYDTIAERKVNK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G + + L EF ++ D +G + F+ G+ V VTG + GKGF G Sbjct: 66 PLKGHMAKAGKDMYRHLREFPLEGVDGY-ELGQEITVDIFSAGEKVKVTGTSKGKGFQGV 124 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF G RA+HG HR GS G PGRV+KNKKM G+MG RVT+ N+E+V V Sbjct: 125 MKRHNFSGSRASHGAEKVHRVPGSVGNATYPGRVWKNKKMPGQMGNARVTLSNVEIVDVR 184 Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207 + +++VKG VPG N ++++R Sbjct: 185 PEDNVLVVKGQVPGP-NNGFVMIR 207 >gi|295398288|ref|ZP_06808330.1| 50S ribosomal protein L3 [Aerococcus viridans ATCC 11563] gi|294973427|gb|EFG49212.1| 50S ribosomal protein L3 [Aerococcus viridans ATCC 11563] Length = 211 Score = 148 bits (374), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 87/215 (40%), Positives = 126/215 (58%), Gaps = 7/215 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT + G +PVTV+ V+ +T + +GY A+QVG + Sbjct: 1 MTKGILGKKVGMTQFFTETGELVPVTVIEAQPNVVLQAKTNETDGYEAIQVGFDNKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118 +KP +G + +PK+ + EF KD +L VGS F G +VDVTG + GK Sbjct: 61 ANKPHKGHVAKAETTPKRFIKEF---KDVELGDYEVGSEIKVDIFQAGDIVDVTGTSKGK 117 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF GA+KRH +HG S HRS GS G D +VFK K + G+ GG ++T++NLE Sbjct: 118 GFQGAIKRHGQSRGPMSHG-SHYHRSPGSMGMASDASKVFKGKNLPGQTGGTQITIQNLE 176 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +V VD +R +IL+KG VPGAKK S + ++ + KSA Sbjct: 177 IVKVDAERNVILIKGNVPGAKK-SMVTIKSAVKSA 210 >gi|90994504|ref|YP_536994.1| ribosomal protein L3 [Porphyra yezoensis] gi|109893085|sp|Q1XDH4|RK3_PORYE RecName: Full=50S ribosomal protein L3, chloroplastic gi|90819068|dbj|BAE92437.1| 50S ribosomal protein L3 [Porphyra yezoensis] Length = 205 Score = 148 bits (374), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 76/197 (38%), Positives = 117/197 (59%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT ++ G IPVTV+ + C + + + +GY A+QVG + + Sbjct: 1 MSVGILGTKVGMTQFFDEAGLSIPVTVIQVGPCVITQIKAVSTDGYNAIQVGYKQVAEQK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+ G P K L E+ ++ DD V + S F VGQ ++V+ ++GKGF Sbjct: 61 LNKPLLGHLKKSQAPPLKYLREYEMKSTDDF-EVSQILSTDLFQVGQKINVSSRSVGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRH+F +HG S +HR GS G PGRV+ K MAG++G +VT+KNL++V Sbjct: 120 SGYQKRHHFSRGPMSHG-SKNHRQPGSIGAGTTPGRVYPGKNMAGQLGNKKVTIKNLQIV 178 Query: 181 SVDDKRGLILVKGCVPG 197 S++ + L++VKG VPG Sbjct: 179 SINSENDLLIVKGAVPG 195 >gi|307694152|ref|ZP_07636389.1| 50S ribosomal protein L3 [Ruminococcaceae bacterium D16] Length = 241 Score = 148 bits (374), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 81/219 (36%), Positives = 120/219 (54%), Gaps = 3/219 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ +K+GMT +++ G +PVTV+ C VV +T +K+GY A+Q+G + Sbjct: 1 MEKAIIGKKIGMTQIFDEAGHVVPVTVIEAGPCTVVQKKTAEKDGYEAIQLGYQTVPERK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLF-EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G + KK+ EFR+ D +G F G VDVTG++ G G Sbjct: 61 LTKPEVGHQKKAGLEELKKVLKEFRLD-DCSKYEIGDELKADVFAAGDRVDVTGISKGHG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 + G +KRH L+ THG HR G+ DP R+FK K AG+MG +VTV NL+V Sbjct: 120 YQGVIKRHGASRLKETHGTGPVHRHAGAMAANSDPSRIFKGKIGAGQMGNEQVTVMNLDV 179 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +SVD + G+I V+G +PG K + +R+S K KG Sbjct: 180 ISVDAELGIIAVRGAIPGP-KGGVVFLRNSVKKYFEPKG 217 >gi|291549416|emb|CBL25678.1| LSU ribosomal protein L3P [Ruminococcus torques L2-14] Length = 227 Score = 148 bits (374), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 92/229 (40%), Positives = 127/229 (55%), Gaps = 20/229 (8%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M+ ++A K+GMT ++N E G IPVTVL C V +T++ +GY AVQVG + K K Sbjct: 1 MKKAILATKVGMTQIFNEEDGVLIPVTVLQAGPCVVTQVKTVENDGYSAVQVGYVDKKEK 60 Query: 60 ----------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103 V+K +G F VS K+ + EFR + ++ + F Sbjct: 61 IVTKDNSGKKSIAHRNGVTKAEKGHFDKAGVSGKRYVKEFRFENAEEYT-LAQEIKADIF 119 Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 G +D T ++ GKGF GA+KRHN THG S HR GS G DP +VFK KKM Sbjct: 120 AAGDKIDATAVSKGKGFQGAIKRHNQSRGPMTHG-SKFHRHAGSNGSASDPSKVFKGKKM 178 Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G+MG ++TV+NLEVV VD + LILVKG VPG KK + ++++ K+ Sbjct: 179 PGQMGNKKITVQNLEVVRVDAENNLILVKGSVPGPKK-CLVTIKETVKA 226 >gi|328958728|ref|YP_004376114.1| 50S ribosomal protein L3 [Carnobacterium sp. 17-4] gi|328675052|gb|AEB31098.1| 50S ribosomal protein L3 [Carnobacterium sp. 17-4] Length = 210 Score = 148 bits (374), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 93/216 (43%), Positives = 127/216 (58%), Gaps = 10/216 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ G IPVTV+ V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGKKVGMTQVFTESGELIPVTVIEATPNVVLQVKTIETDGYEAVQLGYQDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLL---PVGSVFSPSYFTVGQLVDVTGMTIG 117 +KP G + N +PK+ + EF DD L VG F G +V+VTG T G Sbjct: 61 SNKPAMGHVAKANATPKRFIREF----DDVELGDYEVGQEVKVDAFKAGDIVNVTGTTKG 116 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF G +KRH +HG S HR GS G DP RVFK + GRMGGNRVT+KNL Sbjct: 117 KGFQGVIKRHGHSRGPMSHG-SRHHRRPGSMGP-VDPNRVFKRTLLPGRMGGNRVTIKNL 174 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 EVV VD ++ +IL+KG VPG+KK S I ++ +F+ A Sbjct: 175 EVVRVDVEKNVILIKGNVPGSKK-SLIQIKSAFQKA 209 >gi|124514443|gb|EAY55956.1| ribosomal protein L3 [Leptospirillum rubarum] Length = 207 Score = 148 bits (374), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 79/202 (39%), Positives = 124/202 (61%), Gaps = 4/202 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RKLGMT +Y G+ +PVT++ C+V+ +T +K GY A Q+G K+++KP Sbjct: 4 LLGRKLGMTQIYLPSGQAVPVTIVEAGPCEVLQVKTSEKEGYSAAQIGYFPVSPKHLNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 RG + + + EF+V+++ G++ + F G +D+TG + GKGF+G M Sbjct: 64 ERGHQQKYAKNLYRYVREFKVEENTQA--PGNILTVEIFQEGDSLDITGQSKGKGFAGVM 121 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH+F G ATHG S+ HR GS G P RV KNKK+ G MG R+TVKNL++++V Sbjct: 122 KRHHFRGGDATHG-SMFHREPGSIGSSAYPSRVLKNKKLPGHMGDKRITVKNLKLIAVKP 180 Query: 185 KRGLILVKGCVPGAKKNSWILV 206 + L+ +KG +PG+ S+++V Sbjct: 181 EANLLFIKGAIPGS-NGSFVVV 201 >gi|148268690|ref|YP_001247633.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus JH9] gi|189029484|sp|A5IV34|RL3_STAA9 RecName: Full=50S ribosomal protein L3 gi|147741759|gb|ABQ50057.1| LSU ribosomal protein L3P [Staphylococcus aureus subsp. aureus JH9] Length = 220 Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 93/219 (42%), Positives = 122/219 (55%), Gaps = 11/219 (5%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+QVG Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYK 60 Query: 53 AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 K +KP G + +PK+ + EFR D D VG S F G ++DVT Sbjct: 61 KDAKSNKYANKPAEGHAKKADAAPKRFIREFR-NVDVDAYEVGQEVSVDTFVAGDVIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH +H S HR+ S G D RVFK +KM GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQSRGPMSHS-SHFHRAPDSVGMASDASRVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 TV+NLEVV VD + +ILVKG VPG KK + +R S K Sbjct: 179 TVQNLEVVQVDTENKVILVKGNVPGPKK-GLVEIRTSIK 216 >gi|296120747|ref|YP_003628525.1| ribosomal protein L3 [Planctomyces limnophilus DSM 3776] gi|296013087|gb|ADG66326.1| ribosomal protein L3 [Planctomyces limnophilus DSM 3776] Length = 245 Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 93/238 (39%), Positives = 133/238 (55%), Gaps = 27/238 (11%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ +G IPVTV+ C V+ RT++++GY AVQ+G + + Sbjct: 14 MSCGLLGRKVGMTQVFTPQGEAIPVTVIECGPCVVLQIRTVERDGYSAVQLGFSDKPRRL 73 Query: 61 VSKPMRGFFSSVN-------------------VSPKKKLFEFRVQKDD-DLLPVGSVFSP 100 S+ RG ++++ PK+ + EFRV ++ VG V + Sbjct: 74 ASRSERGHVAAIDSKRRKSLAAAGVALAEKADCEPKRFVREFRVTPEEASAFTVGQVLTV 133 Query: 101 SY-FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159 S F + VDV G + G+GF+G MKRHNF G A+HGV HRS GSTG DPG+VFK Sbjct: 134 SQIFGEVKHVDVVGTSKGRGFAGVMKRHNFHGTCASHGVKKVHRSGGSTGQSTDPGKVFK 193 Query: 160 NKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 KM G G +VTV+ L+VV DD+ ++LV+G VPG ++ VR + NCK Sbjct: 194 GTKMPGHYGDAQVTVRRLQVVRADDENNVLLVRGAVPGY-SGGFVRVRKT-----NCK 245 >gi|138893785|ref|YP_001124238.1| 50S ribosomal protein L3 [Geobacillus thermodenitrificans NG80-2] gi|196251024|ref|ZP_03149706.1| ribosomal protein L3 [Geobacillus sp. G11MC16] gi|166233146|sp|A4IJI9|RL3_GEOTN RecName: Full=50S ribosomal protein L3 gi|134265298|gb|ABO65493.1| Ribosomal protein L3 [Geobacillus thermodenitrificans NG80-2] gi|196209496|gb|EDY04273.1| ribosomal protein L3 [Geobacillus sp. G11MC16] Length = 211 Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 90/219 (41%), Positives = 125/219 (57%), Gaps = 8/219 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+Q+G + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTIENDGYEAIQLGFEDLSTKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G + N +PK+ + E R ++ VG F+ G +VDVTG++ GKGF Sbjct: 61 ANKPQIGHAAKANTAPKRFIREIRGANVNEY-EVGQEVKVDIFSEGDIVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFK K + GRMGG RVT++NL++V Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGAIA-PNRVFKTKNLPGRMGGERVTIQNLKIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 VD +R L+L+KG VPG +K I+ KSAV K K Sbjct: 178 KVDPERNLLLIKGNVPGPRKGLVIV-----KSAVKAKAK 211 >gi|70725803|ref|YP_252717.1| 50S ribosomal protein L3 [Staphylococcus haemolyticus JCSC1435] gi|82581592|sp|Q4L8B4|RL3_STAHJ RecName: Full=50S ribosomal protein L3 gi|68446527|dbj|BAE04111.1| 50S ribosomal protein L3 [Staphylococcus haemolyticus JCSC1435] Length = 220 Score = 148 bits (373), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 92/219 (42%), Positives = 121/219 (55%), Gaps = 11/219 (5%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKKAYK 60 Query: 53 AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 K +KP G +PK+ + EFR + D VG + F G ++DVT Sbjct: 61 KDAKSNKYANKPAEGHAKKAGAAPKRFIREFR-NVNVDEYEVGQEVTVDTFEAGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G + GKGF GA+KRH HG S HR+ GS G D RVFK +KM GRMGGN V Sbjct: 120 GTSKGKGFQGAIKRHGQARGPMAHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 TV+NLEVV VD + +ILVKG VPG KK ++ ++ S K Sbjct: 179 TVQNLEVVQVDTENNVILVKGNVPGPKK-GFVEIQTSIK 216 >gi|322390660|ref|ZP_08064174.1| 50S ribosomal protein L3 [Streptococcus parasanguinis ATCC 903] gi|321142633|gb|EFX38097.1| 50S ribosomal protein L3 [Streptococcus parasanguinis ATCC 903] Length = 208 Score = 148 bits (373), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 128/212 (60%), Gaps = 6/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNVEGLEVGDEITVDTFEAGDIVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFK K +AGRMGG+RVT++NLEVV Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ +IL+KG VPGAKK S I ++ + K+ Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKA 206 >gi|308272979|emb|CBX29583.1| 50S ribosomal protein L3 [uncultured Desulfobacterium sp.] Length = 211 Score = 148 bits (373), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 81/199 (40%), Positives = 121/199 (60%), Gaps = 2/199 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT +++ EG+ +PVTVL + C V ++ + +GY A+Q+G GE K Sbjct: 1 MCRGLIGKKLGMTVMFSSEGKCVPVTVLKVGPCVVTQIKSNETDGYNALQIGFGEKKKTR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP++G + + + EF V+ ++ +G + + F VG LVDV+G+ G+GF Sbjct: 61 INKPVQGHLKKGGLESCEYMREFSVENPEE-YKLGQILNIEMFNVGDLVDVSGIIKGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG +KRH F G R THG S HR GS G P RVFK KK+ G G + T++NLE++ Sbjct: 120 SGVIKRHGFSGGRKTHG-SHCHRIPGSIGASAWPSRVFKGKKLPGHYGCCKQTMRNLEII 178 Query: 181 SVDDKRGLILVKGCVPGAK 199 V LIL+KG VPG + Sbjct: 179 DVRQHDNLILLKGAVPGPR 197 >gi|228470688|ref|ZP_04055539.1| 50S ribosomal protein L3 [Porphyromonas uenonis 60-3] gi|228307545|gb|EEK16541.1| 50S ribosomal protein L3 [Porphyromonas uenonis 60-3] Length = 205 Score = 148 bits (373), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 81/197 (41%), Positives = 122/197 (61%), Gaps = 3/197 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EG +P TV+ + C V +T D++GY A+Q+G +AK K+ ++ Sbjct: 3 GLLGKKIGMTSVFSAEGVNVPCTVIEVGPCVVTQVKTADRDGYEAIQLGFQDAKDKHTTR 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F + V+ K+ L EF D L G + F VDV G + GKGF G Sbjct: 63 PLQGHFKAAGVTNKRHLAEFMGFGSDYKL--GDEITVELFNDTHYVDVHGTSKGKGFQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ ++THG R+ G+ G P +VFK +MAG+MG RVTV+NLEV+ V Sbjct: 121 VKRHGFGGVGQSTHGQDDRLRAPGAVGACSYPAKVFKGTRMAGQMGNKRVTVQNLEVIKV 180 Query: 183 DDKRGLILVKGCVPGAK 199 + ++++KG VPGAK Sbjct: 181 MPEHNILVLKGSVPGAK 197 >gi|298373698|ref|ZP_06983687.1| 50S ribosomal protein L3 [Bacteroidetes oral taxon 274 str. F0058] gi|298274750|gb|EFI16302.1| 50S ribosomal protein L3 [Bacteroidetes oral taxon 274 str. F0058] Length = 206 Score = 148 bits (373), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 81/205 (39%), Positives = 125/205 (60%), Gaps = 3/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ P TV+ + C V +T++K+GY A Q+G E K K+ +K Sbjct: 3 GLIGKKVGMTSVFSADGKNTPCTVIEVGPCVVTQVKTVEKDGYQAYQLGFEEKKEKHTNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 G F VS ++ L EF+ D +L +V + + F VDV G++ GKGF G Sbjct: 63 AEAGHFKKAGVSARRNLVEFK-SFDKELKAGDTVTADAVFEENDFVDVVGISKGKGFQGV 121 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ + THG R+ GS G P +V K +MAGR GG+RVT++NL+VV + Sbjct: 122 VKRHGFGGVGQQTHGQHNRGRAPGSMGASSYPSKVVKGMRMAGRTGGDRVTIQNLQVVKI 181 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + +++VKG +PGA K S +L+ Sbjct: 182 IPEHNIVMVKGSIPGA-KGSIVLIE 205 >gi|21674998|ref|NP_663063.1| 50S ribosomal protein L3 [Chlorobium tepidum TLS] gi|42559650|sp|Q8KAH2|RL3_CHLTE RecName: Full=50S ribosomal protein L3 gi|21648231|gb|AAM73405.1| ribosomal protein L3 [Chlorobium tepidum TLS] Length = 209 Score = 148 bits (373), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 86/207 (41%), Positives = 117/207 (56%), Gaps = 1/207 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT +YN + +P TV+ C V ++ +K+GY A Q+G GE K VSKP Sbjct: 4 ILGKKIGMTRLYNDKREAVPCTVIQAGPCYVTQVKSTEKDGYEAYQLGFGERDEKKVSKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + G + +P L E L G+ F G V+V G+T GKGF+G + Sbjct: 64 LAGHYKKAGKNPGYILSEVSKSLIVGELEAGATVPVDVFKEGDKVNVLGVTKGKGFAGVV 123 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHNFGG THG S R+ GS G DP R FK +MAGRMGG TV+NL +V V Sbjct: 124 KRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFKGTRMAGRMGGKNKTVQNLVIVKVMP 183 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211 + LI+VKG VPG KNS++ + + K Sbjct: 184 ESNLIVVKGAVPGP-KNSYVKIVSTTK 209 >gi|293115547|ref|ZP_05792032.2| 50S ribosomal protein L3 [Butyrivibrio crossotus DSM 2876] gi|292809408|gb|EFF68613.1| 50S ribosomal protein L3 [Butyrivibrio crossotus DSM 2876] Length = 240 Score = 147 bits (372), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 91/228 (39%), Positives = 124/228 (54%), Gaps = 19/228 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52 M+ ++A K+GMT ++N +G +PVTVL C V +T++ +GY AVQVG Sbjct: 14 MKKAILATKIGMTQIFNEDGVLVPVTVLQAGPCVVTQVKTVENDGYAAVQVGFVDKKEKI 73 Query: 53 -----AGEAKVKN---VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 G +++N V+K +G F VS K+ + EFR + D V F Sbjct: 74 VNVDKNGSKEIRNRHGVTKAEKGHFDKAGVSYKRYVREFRFENAADYT-VADEIKADIFA 132 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G +D T + GKGF GA+KRH HG S HR GS G DP RVFK K M Sbjct: 133 AGDKLDATAIAKGKGFQGAIKRHGQHRGPMAHG-SKFHRHQGSNGSSSDPSRVFKGKGMP 191 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G MG ++TV+NLE+V VD + LILVKG VPG KK S + ++++ KS Sbjct: 192 GHMGAKKITVQNLEIVKVDVENNLILVKGAVPGPKK-SLVTLKETVKS 238 >gi|167463902|ref|ZP_02328991.1| Ribosomal protein L3 [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381126|ref|ZP_08055129.1| 50S ribosomal protein L3-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154702|gb|EFX46973.1| 50S ribosomal protein L3-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 208 Score = 147 bits (372), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 122/212 (57%), Gaps = 6/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT V+ EG +PVTV+ C V+ + + +GY A+QVG + K K Sbjct: 1 MTKGILGKKLGMTQVFTPEGLVVPVTVIQAGPCVVLQKKDSENDGYEAIQVGFEDKKEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFR-VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP G N +PK+ + EFR VQ D VG F G+ VDVTG + GKG Sbjct: 61 ANKPEIGHAKKANTTPKRYVQEFRGVQLSD--YEVGQELKADLFAEGEFVDVTGTSKGKG 118 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KRHN +HG S HR GS G RVFK K + G MG VT++NL+V Sbjct: 119 FQGVIKRHNQSRGPMSHG-SRYHRGPGSMGSIA-ANRVFKGKNLPGHMGHETVTLQNLQV 176 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 + VD +R +ILVKG +PG KNS++ V+ + K Sbjct: 177 IKVDAERNVILVKGSIPGP-KNSYVKVQSAVK 207 >gi|172056140|ref|YP_001812600.1| 50S ribosomal protein L3 [Exiguobacterium sibiricum 255-15] gi|226725176|sp|B1YGV0|RL3_EXIS2 RecName: Full=50S ribosomal protein L3 gi|171988661|gb|ACB59583.1| ribosomal protein L3 [Exiguobacterium sibiricum 255-15] Length = 208 Score = 147 bits (372), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 91/211 (43%), Positives = 131/211 (62%), Gaps = 5/211 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT ++N G +PVTV+ ++ V+ +T++ +GY AVQ+G G+ K Sbjct: 1 MAKGILGTKLGMTQIFNESGEVVPVTVVSVEGNVVLQLKTMEVDGYEAVQLGFGDIKEGR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + + +PK+ + E R D +G F G++VDVTG + GKGF Sbjct: 61 QNKPQKGHAAKASATPKRFIKEIRTSVTD--FEIGQEIKADTFAAGEMVDVTGTSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GA+KRHN HG S HR GS G P RVFK K + GRMGG +VTV+NLE+V Sbjct: 119 AGAIKRHNQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGEQVTVQNLEIV 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +RGL+LVKG +PGA+K S ++V+ + K Sbjct: 177 KVDVERGLLLVKGAIPGARK-SQVVVKTAVK 206 >gi|269991357|emb|CAX12541.1| 50S ribosomal protein L3 [Fucus vesiculosus] Length = 209 Score = 147 bits (372), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 2/201 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+ K+GMT +++ EG +PVTV+ + C + +T NGY AVQ+G + +V Sbjct: 1 MSIGIFGNKIGMTQIFDKEGLALPVTVIRVGPCFITQLKTEQLNGYSAVQIGYLKRQVLK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++K G + + P L E++V D +G V + YF +GQ V+V+G +IGKGF Sbjct: 61 LNKAELGHLTKNGLLPLLYLREYKV-PDPTNYSLGQVINVDYFQIGQFVNVSGKSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRHNF THG S +H++ GS G PGRVF K+MAG++G +VT+ LE++ Sbjct: 120 SGNQKRHNFKRGPMTHG-SKNHKAPGSIGPGTTPGRVFPGKRMAGQLGAKKVTISKLEIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKN 201 +D K L+++KG VPG N Sbjct: 179 GIDSKHSLLILKGSVPGKSGN 199 >gi|220928207|ref|YP_002505116.1| 50S ribosomal protein L3 [Clostridium cellulolyticum H10] gi|254803665|sp|B8I7X9|RL3_CLOCE RecName: Full=50S ribosomal protein L3 gi|219998535|gb|ACL75136.1| ribosomal protein L3 [Clostridium cellulolyticum H10] Length = 212 Score = 147 bits (372), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 87/214 (40%), Positives = 129/214 (60%), Gaps = 4/214 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT +++ G IPVTV+ VV +T++ +GY A++VG + K Sbjct: 1 MKKAMLGKKIGMTQIFDENGLVIPVTVVEAGPLTVVQKKTVETDGYDAIKVGYVKVAEKK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG-SVFSPSYFTVGQLVDVTGMTIGKG 119 +SKP G FS ++P K L EFR++ D VG + + + F G +DV+G++ GKG Sbjct: 61 LSKPNLGQFSKTKLAPMKHLKEFRLE-DISGFEVGQEIKAENMFQSGDKIDVSGVSKGKG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G KR+ THG S+ HR GS G +PGRVFK KK+ G MG +TV+NLEV Sbjct: 120 FQGVTKRYGQRTGPNTHG-SMYHRRIGSMGSGTNPGRVFKGKKLPGHMGRETITVQNLEV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V VD R LIL+KG +PG K ++++++ KS Sbjct: 179 VRVDSDRNLILIKGAIPGP-KGGLLVIKNTVKSG 211 >gi|302337477|ref|YP_003802683.1| 50S ribosomal protein L3 [Spirochaeta smaragdinae DSM 11293] gi|301634662|gb|ADK80089.1| 50S ribosomal protein L3 [Spirochaeta smaragdinae DSM 11293] Length = 206 Score = 147 bits (372), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 84/194 (43%), Positives = 116/194 (59%), Gaps = 4/194 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT +++ G PVTV+ +++ V+ R +KNGY A +GA + K K+V+K Sbjct: 3 GLIGKKVGMTQIFDERGVLTPVTVIKIEDNVVIDKRDEEKNGYTASVIGAEDLKSKHVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F NV PK+ L E R + + VG F VDV G + GKG+ GA Sbjct: 63 PYGGQFPE-NVHPKRYLVEMRDFEAES--SVGETLGVGIFKEISFVDVVGTSKGKGYQGA 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G RATHG S HR G TG P +V K KM GRMG R TV+NL V+ VD Sbjct: 120 MKRHGFKGGRATHG-SKFHRGLGGTGMAATPSKVLKGAKMPGRMGAARTTVQNLRVIKVD 178 Query: 184 DKRGLILVKGCVPG 197 +++ +++VKG +PG Sbjct: 179 EEKQVLMVKGAIPG 192 >gi|325299132|ref|YP_004259049.1| 50S ribosomal protein L3 [Bacteroides salanitronis DSM 18170] gi|324318685|gb|ADY36576.1| 50S ribosomal protein L3 [Bacteroides salanitronis DSM 18170] Length = 205 Score = 147 bits (372), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 80/205 (39%), Positives = 123/205 (60%), Gaps = 3/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V ++++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQLGFQDMKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PK+ L EF+ ++ L +G + F VDV G + GKG+ G Sbjct: 63 PLMGHFKKAGVTPKRHLAEFKDFSEE--LNLGDTITVELFNDAPYVDVIGTSKGKGYQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ + THG R GS G P +VFK +MAG MG +RVT NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMAGHMGCDRVTTHNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + L+L+KG VPG K + I+ + Sbjct: 181 IPEHNLLLIKGSVPGYKGSIVIIEK 205 >gi|311748514|ref|ZP_07722299.1| 50S ribosomal protein L3 [Algoriphagus sp. PR1] gi|126577030|gb|EAZ81278.1| 50S ribosomal protein L3 [Algoriphagus sp. PR1] Length = 210 Score = 147 bits (372), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 83/209 (39%), Positives = 123/209 (58%), Gaps = 5/209 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ +GR + T++ C V + ++ +GY AVQ+ GE K KN Sbjct: 2 SGIIGKKVGMTSIFSADGRNVACTLIEAGPCVVTQVKNVETDGYNAVQLAYGERKEKNTP 61 Query: 63 KPMRGFFSSVNVSPKKKLF---EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 KP+ G F +PK+K+ EFRV+ + + +V S F G VD G + GKG Sbjct: 62 KPLIGHFKKAGTTPKQKVVEFREFRVEFEGQVDLGATVKSSEVFVEGDFVDAIGTSKGKG 121 Query: 120 FSGAMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 F G +KRH F G+ +THG R GS G P RVFK +MAGR GG+RV V NL+ Sbjct: 122 FQGVVKRHGFAGVGGSTHGQHNRQRHPGSIGACSWPSRVFKGMRMAGRTGGDRVKVINLK 181 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVR 207 V+ + ++ L+LV G VPG KNS++++ Sbjct: 182 VLKIYPEQNLLLVSGSVPGP-KNSFVILE 209 >gi|154498883|ref|ZP_02037261.1| hypothetical protein BACCAP_02875 [Bacteroides capillosus ATCC 29799] gi|150271723|gb|EDM98949.1| hypothetical protein BACCAP_02875 [Bacteroides capillosus ATCC 29799] Length = 240 Score = 147 bits (372), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 79/199 (39%), Positives = 115/199 (57%), Gaps = 1/199 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ +K+GMT +++ G+ IPVTV+ C V +T++K+GY AVQ+G + + Sbjct: 1 MEKAIIGKKVGMTQIFDEAGKVIPVTVIEAGPCVVTQKKTVEKDGYTAVQLGFEDVPERK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP G VS K+ L EF + + + L +G F G VDVTG++ GKG+ Sbjct: 61 LTKPELGHLKKAGVSAKRVLKEFALN-NAESLNIGDEVKADAFAAGDRVDVTGISKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH L+ +HG HR GS DP R+FK K AG+MG +VTV NL+VV Sbjct: 120 AGVIKRHGAHRLKESHGTGPVHRHAGSMSANSDPSRIFKGKIGAGQMGNEQVTVLNLDVV 179 Query: 181 SVDDKRGLILVKGCVPGAK 199 VD + LI V G +PG K Sbjct: 180 KVDPELNLIAVCGAIPGPK 198 >gi|260905721|ref|ZP_05914043.1| 50S ribosomal protein L3 [Brevibacterium linens BL2] Length = 224 Score = 147 bits (372), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 85/209 (40%), Positives = 117/209 (55%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ + +PVTV+ + V R + +GY AVQ+ GE + V+K Sbjct: 17 GLLGTKLGMTQVWDEQNNLVPVTVVAAGSNVVTQVRNEETDGYPAVQIAFGEIDPRKVNK 76 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ L E R D +G F G VDVT T GKG +G Sbjct: 77 PTAGHFEKAGVTPRRHLVELRTADAADY-SLGQELGVDTFDAGIKVDVTAKTKGKGTAGV 135 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G+ A+HG +HR GS G PGRVFK +MAGRMG + T +NL + +VD Sbjct: 136 MKRHGFHGVGASHGQHRNHRKPGSIGGAATPGRVFKGMRMAGRMGAVKHTTQNLTIHAVD 195 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + +L+KG VPG K + +LVR + K Sbjct: 196 TENNFLLIKGAVPG-PKGAVVLVRSAAKE 223 >gi|154483187|ref|ZP_02025635.1| hypothetical protein EUBVEN_00888 [Eubacterium ventriosum ATCC 27560] gi|149735995|gb|EDM51881.1| hypothetical protein EUBVEN_00888 [Eubacterium ventriosum ATCC 27560] Length = 198 Score = 147 bits (372), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 86/201 (42%), Positives = 117/201 (58%), Gaps = 5/201 (2%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++N G +PVTVL C V +T++ +GY AVQVG + + K V+KP++G F Sbjct: 1 MTQIFNEAGELVPVTVLQAGPCVVTQVKTIENDGYEAVQVGFEDIREKLVNKPVKGMFDK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 VS K+ + EF+++ + V F G +D T + GKGF GA+KRH Sbjct: 61 AGVSYKRYVREFKLEGE---YSVKDEIKVDVFEAGDKIDATAIAKGKGFQGAIKRHGQSR 117 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 HG S HR GS G P RVFK KKM G MGG +VT +NLEVV VD ++ L+LV Sbjct: 118 GPMAHG-SKYHRHAGSNGSCSTPSRVFKGKKMPGHMGGKKVTTQNLEVVRVDAEKNLLLV 176 Query: 192 KGCVPGAKKNSWILVRDSFKS 212 KG VPG KK S + +++S K+ Sbjct: 177 KGAVPGPKK-SLVTIKESVKA 196 >gi|132952|sp|P28600|RL3_BACST RecName: Full=50S ribosomal protein L3 gi|40102|emb|CAA47402.1| ribosomal protein L3 [Geobacillus stearothermophilus] Length = 213 Score = 147 bits (372), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 84/200 (42%), Positives = 119/200 (59%), Gaps = 3/200 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ G IPVTV+H V+ +T++ +GY A+Q+G + K Sbjct: 1 MTKGILGRKIGMTQIFAENGDLIPVTVIHATPNVVLQKKTIENDGYEAIQLGFEDISEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G + N +PK+ + E R ++ VG F+ G +VDVTG++ GKGF Sbjct: 61 ANKPQIGHAAKANTAPKRFIREIRGANINEY-EVGQEVKVDIFSEGDIVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G P RVFK K + GRMGG RVT++NL++V Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGAIA-PNRVFKTKNLPGRMGGERVTIQNLKIV 177 Query: 181 SVDDKRGLILVKGCVPGAKK 200 VD +R L+L+KG VPG +K Sbjct: 178 KVDPERNLLLIKGNVPGPRK 197 >gi|313887083|ref|ZP_07820782.1| 50S ribosomal protein L3 [Porphyromonas asaccharolytica PR426713P-I] gi|312923494|gb|EFR34304.1| 50S ribosomal protein L3 [Porphyromonas asaccharolytica PR426713P-I] gi|332176633|gb|AEE12323.1| 50S ribosomal protein L3 [Porphyromonas asaccharolytica DSM 20707] Length = 205 Score = 147 bits (372), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 81/197 (41%), Positives = 122/197 (61%), Gaps = 3/197 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EG +P TV+ + C V +T D++GY A+Q+G +AK K+ ++ Sbjct: 3 GLLGKKIGMTSVFSAEGVNVPCTVIEVGPCVVTQVKTADRDGYEAIQLGFQDAKDKHTTR 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F + V+ K+ L EF D L G + F VDV G + GKGF G Sbjct: 63 PLQGHFKAAGVTNKRHLAEFMGFGSDYKL--GDEITVELFNDTHYVDVHGTSKGKGFQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ ++THG R+ GS G P +VFK +MAG++G RVTV+NLEV+ V Sbjct: 121 VKRHGFGGVGQSTHGQDDRLRAPGSVGACSYPAKVFKGTRMAGQLGNKRVTVQNLEVIKV 180 Query: 183 DDKRGLILVKGCVPGAK 199 + ++++KG VPGAK Sbjct: 181 MPEHNILVLKGSVPGAK 197 >gi|166031659|ref|ZP_02234488.1| hypothetical protein DORFOR_01359 [Dorea formicigenerans ATCC 27755] gi|166028636|gb|EDR47393.1| hypothetical protein DORFOR_01359 [Dorea formicigenerans ATCC 27755] Length = 226 Score = 147 bits (372), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 88/228 (38%), Positives = 125/228 (54%), Gaps = 19/228 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G PVTVL C V +T++ +GY AVQVG + K K Sbjct: 1 MKKAILATKVGMTQIFNEDGTLTPVTVLQAGPCVVTQIKTVENDGYEAVQVGFVDKKDKT 60 Query: 61 V----------------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V +K +G F+ V+ K+ + EF+ + D + F Sbjct: 61 VNKDKNGKKEIVHRHGVTKAEQGHFAKAGVTGKRFVKEFKFENAADY-ALAQEIKADIFE 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G +D T ++ GKGF GA+KRHN HG S HR GS G DP +VFK KKM Sbjct: 120 AGDKIDATAISKGKGFQGAIKRHNQHRGPMAHG-SKFHRHQGSNGAASDPSKVFKGKKMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G MG ++T++NLEVV VD + L+LVKG VPG KK S + +R++ K+ Sbjct: 179 GHMGSKKITIQNLEVVRVDAENNLLLVKGSVPGPKK-SLVTIREAVKA 225 >gi|160894756|ref|ZP_02075531.1| hypothetical protein CLOL250_02307 [Clostridium sp. L2-50] gi|156863690|gb|EDO57121.1| hypothetical protein CLOL250_02307 [Clostridium sp. L2-50] Length = 227 Score = 147 bits (372), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 92/228 (40%), Positives = 126/228 (55%), Gaps = 19/228 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--- 57 M+ ++A K+GMT +++ G +PVTVL C V +T++ +GY A+QVG GE K Sbjct: 1 MKKAILATKVGMTQIFDENGVLVPVTVLQAGPCVVTQVKTVENDGYDAIQVGFGEKKERI 60 Query: 58 -VKNVS------------KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 K+VS K G N +PK EFR+ D +G+ F Sbjct: 61 TTKDVSGKKVIRNPHGAGKAEVGHAKKANTTPKTFYREFRLD-DCAQYELGAEIKADVFA 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G +DVT T GKG++G +KRH + HG S HR GS G PGRVFK KKM Sbjct: 120 EGDKIDVTAKTKGKGYAGGLKRHGLKSGPSGHG-SKYHRHAGSNGSATTPGRVFKGKKMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G MG RVT++NLEVV +D + +ILVKG VPG KK S ++++D+ K+ Sbjct: 179 GHMGSVRVTIQNLEVVKIDVENDVILVKGAVPGPKK-SLVMIKDTVKT 225 >gi|116515259|ref|YP_802888.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|122285345|sp|Q057A4|RL3_BUCCC RecName: Full=50S ribosomal protein L3 gi|58384692|gb|AAW72707.1| 50S ribosomal protein L3 [Buchnera aphidicola (Cinara cedri)] gi|116257113|gb|ABJ90795.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 208 Score = 147 bits (372), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 85/208 (40%), Positives = 127/208 (61%), Gaps = 2/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +KLGMT ++ E IPVT + + + VV +T++ + Y ++Q+ G K K V K Sbjct: 3 GLVGKKLGMTRIFFEEYTSIPVTAIEILDNIVVQVKTIENDNYESIQLTTGFKKEKKVLK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 G F NVS + L+EF+ K+ G + ++F + +D+TG++ GKGF+G Sbjct: 63 SEYGHFLKFNVSVGRGLWEFKC-KNSSNYSSGQKITINFFKNIKKLDITGISKGKGFAGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF ATHG S+SHR GS G Q PG VFK KKM+G +G R T++NL++V +D Sbjct: 122 VKRWNFRMQDATHGNSLSHRVPGSIGQNQTPGHVFKGKKMSGHLGDQRTTIQNLKIVKID 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +IL+KG +PG+ S IL++ S K Sbjct: 182 DINKIILIKGSIPGS-IGSDILLKPSIK 208 >gi|299820955|ref|ZP_07052844.1| 50S ribosomal protein L3 [Listeria grayi DSM 20601] gi|299817976|gb|EFI85211.1| 50S ribosomal protein L3 [Listeria grayi DSM 20601] Length = 209 Score = 147 bits (371), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 88/212 (41%), Positives = 124/212 (58%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T+D +GY AVQ+G + K Sbjct: 1 MTKGILGRKVGMTQVFTENGELIPVTVIEAAENVVLQKKTVDTDGYEAVQIGFENKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G N +PK+ + E R + D +G+ F G +VD TG++ GKGF Sbjct: 61 SNKPEKGHVVKANTTPKRFIREIR-DVNLDEYEIGAEVKVDVFAEGDIVDATGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK + GRMGG +VT++NLE+V Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQVTIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + ++LVKG VPGAKK S + ++ + K+ Sbjct: 178 KVDVDKNILLVKGNVPGAKK-SLVQIKTAVKA 208 >gi|16801842|ref|NP_472110.1| 50S ribosomal protein L3 [Listeria innocua Clip11262] gi|116873998|ref|YP_850779.1| 50S ribosomal protein L3 [Listeria welshimeri serovar 6b str. SLCC5334] gi|42559673|sp|Q927K7|RL3_LISIN RecName: Full=50S ribosomal protein L3 gi|123466648|sp|A0ALW8|RL3_LISW6 RecName: Full=50S ribosomal protein L3 gi|16415317|emb|CAC98007.1| ribosomal protein L3 [Listeria innocua Clip11262] gi|116742876|emb|CAK22000.1| ribosomal protein L3 [Listeria welshimeri serovar 6b str. SLCC5334] Length = 209 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 84/212 (39%), Positives = 128/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY AVQ+G + + K Sbjct: 1 MTKGILGRKVGMTQVFTENGELIPVTVIEAAQNVVLQKKTVETDGYEAVQIGFEDKRAKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + + +PK+ + EFR + D +G+ F G ++D TG++ GKGF Sbjct: 61 SNKPEQGHVAKADTTPKRFIREFR-DVNLDEYEIGAEVKVDVFAEGDIIDATGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK + GRMGG ++T++NLE+V Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQITIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++ ++LVKG VPGAKK + + ++ + K+ Sbjct: 178 KVDVEKNVLLVKGNVPGAKK-ALVQIKTATKA 208 >gi|86132544|ref|ZP_01051137.1| 50S ribosomal protein L3 [Dokdonia donghaensis MED134] gi|85816786|gb|EAQ37971.1| 50S ribosomal protein L3 [Dokdonia donghaensis MED134] Length = 203 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 80/206 (38%), Positives = 126/206 (61%), Gaps = 6/206 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C + RT + +GY A+Q+G + VK + Sbjct: 2 SGLIGKKVGMTSIFDENGKNIPCTVIEAGPCVITQVRTKETDGYEALQLGFDD--VKKAN 59 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G K+K+ EF Q + +G + +F G+ VDV+G + GKGF G Sbjct: 60 KAATGHAKKAGTVAKRKVVEF--QGFEGEFKLGDAITVDHFAEGEFVDVSGTSKGKGFQG 117 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH F G+ +ATHG R+ GS G P RVFK +MAGRMGG+++ V+NL+V+ Sbjct: 118 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGDKIKVQNLKVLK 177 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L++VKGCVPG KN++++++ Sbjct: 178 VVAEKNLLVVKGCVPG-HKNAYVIIQ 202 >gi|226329480|ref|ZP_03804998.1| hypothetical protein PROPEN_03389 [Proteus penneri ATCC 35198] gi|225202666|gb|EEG85020.1| hypothetical protein PROPEN_03389 [Proteus penneri ATCC 35198] Length = 181 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 83/176 (47%), Positives = 109/176 (61%), Gaps = 1/176 (0%) Query: 30 LDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD 89 + N +V R L+K+GY A+QV G K V KP G F+ V + L EFR+ + + Sbjct: 1 MKNNRVTQVRDLEKDGYRAIQVTTGSKKANRVLKPEAGHFAKAGVEAGRLLREFRLNEGE 60 Query: 90 DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTG 149 + VG S F + VDVTG + GKGF+G +KR NF ATHG S+SHR GS G Sbjct: 61 EYT-VGQSISVEIFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIG 119 Query: 150 CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWIL 205 Q PG+VFK KKMAG++G +VTV++LEVV VD +R L+LVKG VPGA + I+ Sbjct: 120 QNQTPGKVFKGKKMAGQLGNEQVTVQSLEVVRVDAERNLLLVKGAVPGATGSDLIV 175 >gi|330850884|ref|YP_004376634.1| 50S ribosomal protein L3 [Fistulifera sp. JPCC DA0580] gi|328835704|dbj|BAK19000.1| 50S ribosomal protein L3 [Fistulifera sp. JPCC DA0580] Length = 207 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 78/206 (37%), Positives = 124/206 (60%), Gaps = 2/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT +++ G IPVT+L + C V +T K+GY ++QVG G K Sbjct: 1 MSVGLLGNKIGMTQIFDESGNIIPVTILKVGPCVVTQVKTKSKDGYDSIQVGYGNVSPKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G ++ P + L EFRV ++++ +G + + F+ GQL+++ G +IGKGF Sbjct: 61 LTQPELGHLQKSDIQPLRYLKEFRVSEENE-FNLGQILDVNSFSPGQLINIQGKSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KR+NF THG S +HR+ GS G PGRV KKM+G++G T+K L+V+ Sbjct: 120 SGLQKRYNFSRGPMTHG-SKNHRAPGSIGMGTSPGRVLPGKKMSGQVGNKVTTIKKLKVI 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 V+ + ++++KG VPG N +V Sbjct: 179 QVNLEENILVIKGSVPGKPGNLLSIV 204 >gi|189218695|ref|YP_001939336.1| Ribosomal protein L3 [Methylacidiphilum infernorum V4] gi|189185553|gb|ACD82738.1| Ribosomal protein L3 [Methylacidiphilum infernorum V4] Length = 221 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 83/211 (39%), Positives = 129/211 (61%), Gaps = 3/211 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ARK+GMT +++ G P+TVL + VV + + + +QVG + +SK Sbjct: 14 GIMARKIGMTQLFDATGTMHPLTVLVAEPNVVVQCKKEGEGKEVRLQVGYEALPERKLSK 73 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G + +SP++ L EF + ++ P G + S F G+ VDV G+T GKGF G Sbjct: 74 PLLGHYKKSGISPRRHLKEFVFESEESWQP-GQLLDVSRFNEGEKVDVIGITKGKGFQGV 132 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +K+H FGG A+HG S +HR +G+ G R PGRVFKN+ M G MG +VT++NL++ + Sbjct: 133 IKKHGFGGQPASHG-SKTHRRNGAIGERSFPGRVFKNQGMPGHMGRKKVTIQNLDLFKII 191 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 + ++LVKG VPGA K ++VR + K++V Sbjct: 192 PEDNVLLVKGSVPGA-KGDMVIVRKAIKASV 221 >gi|330997365|ref|ZP_08321216.1| 50S ribosomal protein L3 [Paraprevotella xylaniphila YIT 11841] gi|329570739|gb|EGG52455.1| 50S ribosomal protein L3 [Paraprevotella xylaniphila YIT 11841] Length = 205 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 81/205 (39%), Positives = 121/205 (59%), Gaps = 3/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V ++++K+GY AVQ+G EAK KN + Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQLGFQEAKEKNTTA 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F +PK+ L EF + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGTTPKRHLAEFTGFEQE--LNLGDTVTVDMFEGTVYVDVIGTSKGKGFQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ + THG R GS G P +VFK +M G+MG RVT +NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGLRMGGQMGNERVTAQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + L+L+KG VPG K + I+ + Sbjct: 181 IPEHNLLLIKGSVPGYKGSIVIIEK 205 >gi|289449936|ref|YP_003475784.1| 50S ribosomal protein L3 [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184483|gb|ADC90908.1| 50S ribosomal protein L3 [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 211 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 86/212 (40%), Positives = 127/212 (59%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ RK GMT +++ G +PVTV+ QVV +T++ +GY AV+VG + K Sbjct: 1 MEKFMLGRKAGMTQLFDENGVAVPVTVIECGPVQVVQKKTVEVDGYSAVKVGFADKKETA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP G F +SPK+ L EF V ++++ + +F VG VDV+G++ GKG+ Sbjct: 61 VNKPDLGQFKKAGISPKRFLKEFVVAENNEFAAGQELKVSDFFAVGDRVDVSGVSKGKGY 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH G HG S HR GS G PGRVFK KKM G+MG VTV+NL+VV Sbjct: 121 QGNVKRHGQKGGPQAHG-SKYHRRVGSMGPNTWPGRVFKGKKMPGQMGNVNVTVQNLDVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R +I +KG VPG + ++ ++++ K+ Sbjct: 180 LVDGERNIIALKGAVPGP-RGGYLSIKETVKA 210 >gi|259047555|ref|ZP_05737956.1| 50S ribosomal protein L3 [Granulicatella adiacens ATCC 49175] gi|259035746|gb|EEW37001.1| 50S ribosomal protein L3 [Granulicatella adiacens ATCC 49175] Length = 210 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 85/212 (40%), Positives = 127/212 (59%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT + G IPVTV+ + V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGKKVGMTQYFTEAGELIPVTVVEVTPNVVLQLKTIENDGYEAVQLGFDDLREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++P +G + N +PK+ + EF + + VG + F G +VDVTG + GKGF Sbjct: 61 SNRPAKGHVAKANATPKRFIREFNNVELSEY-EVGQEITVDVFKAGDIVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G P RVFK K + G+MGG+R+T++NLEVV Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGGASFPSRVFKGKALPGQMGGDRITIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R +IL+KG VPG+KK S + ++ + KS Sbjct: 179 KVDAERNVILIKGNVPGSKK-SLVEIKTAIKS 209 >gi|124026708|ref|YP_001015823.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. NATL1A] gi|166233176|sp|A2C4Z9|RL3_PROM1 RecName: Full=50S ribosomal protein L3 gi|123961776|gb|ABM76559.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. NATL1A] Length = 218 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 80/217 (36%), Positives = 130/217 (59%), Gaps = 3/217 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +GR +PVT++ C++ ++ D +GY AVQ+G + K Sbjct: 1 MSLGILGKKLGMSQLFDDQGRAVPVTLIEAGPCRITQLKSADTDGYAAVQIGFQLIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + + L E+RV+ + +G+ + F GQ VDV+G T+G+GF Sbjct: 61 INKPSKGHLAKSGNDLLRHLREYRVENSSEF-ELGASITVDDFEKGQKVDVSGDTMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F +HG S +HR GS G PGRV+ K+MAGRMGG +VT + LE++ Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHRLPGSIGAGTTPGRVYPGKRMAGRMGGKKVTTRALEIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 +D L++VKG VPG K S + +R + + V+ + Sbjct: 179 KIDTNHNLLVVKGSVPG-KPGSLLNIRPAKRVGVSIQ 214 >gi|134298093|ref|YP_001111589.1| 50S ribosomal protein L3 [Desulfotomaculum reducens MI-1] gi|172044219|sp|A4J111|RL3_DESRM RecName: Full=50S ribosomal protein L3 gi|134050793|gb|ABO48764.1| LSU ribosomal protein L3P [Desulfotomaculum reducens MI-1] Length = 209 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 86/211 (40%), Positives = 122/211 (57%), Gaps = 4/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++N G IPVTV+ C VV RT + +GY A+Q+G G + Sbjct: 1 MPKGILGKKIGMTQIFNEAGVAIPVTVVEAGPCLVVQKRTPENDGYSAIQLGFGVKRENL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + V P + L E +V D + VG F G+ VDV G + GKGF Sbjct: 61 LNKPTKGHLNKAGVRPVRFLRELKVD-DLEAFQVGQEIKADIFAEGEKVDVVGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNF HG S HR GS+ + P R FK +K+ G G RVTV+NL+VV Sbjct: 120 AGGIKRHNFHRGPMAHG-SKYHRRPGSSAAK-GPARTFKGRKLPGHYGVERVTVQNLQVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L+ +KG VPG + +LV++S K Sbjct: 178 KVDPERNLLAIKGAVPGP-RGGLLLVKNSVK 207 >gi|149072009|ref|YP_001293580.1| 50S ribosomal protein L3 [Rhodomonas salina] gi|212288242|sp|A6MW01|RK3_RHDSA RecName: Full=50S ribosomal protein L3, chloroplastic gi|134302960|gb|ABO70764.1| 50S ribosomal protein L3 [Rhodomonas salina] Length = 208 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 83/210 (39%), Positives = 122/210 (58%), Gaps = 2/210 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT +++ G IPVTV+ C + +T + + Y A+Q+G E K + Sbjct: 1 MIPGILGTKLGMTQIFDESGLAIPVTVIKAGPCILTQIKTQESDSYQAIQIGFSEVKESS 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+ G K L E+RV K + L V + F VG+ V V+G TIGKGF Sbjct: 61 LNKPLLGHLKKSQAPALKHLKEYRV-KSVEGLEVAQKITLDSFEVGKTVSVSGKTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G ++R++F THG S +HR GS G PG+V K KKMAGR+GG + T+KNLE+V Sbjct: 120 AGTVRRYSFTRGPMTHG-SKNHREPGSIGQGSTPGKVHKGKKMAGRLGGKQSTIKNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V+ +++VKG VPG K N + ++ Sbjct: 179 HVNTDNNILVVKGAVPGKKGNILSIQQEEI 208 >gi|226323010|ref|ZP_03798528.1| hypothetical protein COPCOM_00782 [Coprococcus comes ATCC 27758] gi|225208577|gb|EEG90931.1| hypothetical protein COPCOM_00782 [Coprococcus comes ATCC 27758] Length = 226 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 89/228 (39%), Positives = 125/228 (54%), Gaps = 19/228 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK- 59 M+ ++A K+GMT ++N +G PVTVL C V +T++ +GY AVQVG + K K Sbjct: 1 MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQIKTVENDGYSAVQVGFVDKKDKI 60 Query: 60 ---------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V+K +G F V+ K+ + EF+ + D+ + F Sbjct: 61 VNVDKNGKKEIVHRHGVTKAEKGHFDKAGVTGKRFVKEFKFENADEY-QLAQEIKADIFE 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G VD T ++ GKGF GA+KRHN HG S HR GS G DP +VFK KKM Sbjct: 120 AGDKVDATAISKGKGFQGAIKRHNQHRGPMAHG-SKFHRHAGSNGAASDPSKVFKGKKMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G MG ++T++NLE+V VD + L+LVKG VPG KK S + +++S KS Sbjct: 179 GHMGAKKITIQNLEIVRVDVENNLLLVKGAVPGPKK-SLVTIKESVKS 225 >gi|182412051|ref|YP_001817117.1| ribosomal protein L3 [Opitutus terrae PB90-1] gi|177839265|gb|ACB73517.1| ribosomal protein L3 [Opitutus terrae PB90-1] Length = 216 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 88/212 (41%), Positives = 127/212 (59%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M S ++ +K+GMT VY+ + +PVTV+ C VV +T + +GY AVQ+G + K KN Sbjct: 1 MISSLLGKKIGMTQVYDAQNVLVPVTVVEAGPCAVVQVKTTETDGYNAVQIGFEQKKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKK-LFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 S + + +++ + L E R++ L VG V + + F GQLVDV G+T GKG Sbjct: 61 ASLAEKNHAAKASLADAPRVLSEVRLEAAPTL-KVGDVVNVTAFAEGQLVDVIGVTKGKG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR G A+HG S+ HR GS G RQ PGR +KN+ M G MG + TV+NL V Sbjct: 120 FQGVVKRFRVAGGPASHG-SMFHRRIGSIGMRQTPGRTWKNQAMPGHMGQLKRTVQNLRV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V + ++ LILVKG +PGA + ++VR + K Sbjct: 179 VKIIPEKNLILVKGAIPGANGDD-VIVRSAIK 209 >gi|328953158|ref|YP_004370492.1| 50S ribosomal protein L3 [Desulfobacca acetoxidans DSM 11109] gi|328453482|gb|AEB09311.1| 50S ribosomal protein L3 [Desulfobacca acetoxidans DSM 11109] Length = 208 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 86/206 (41%), Positives = 125/206 (60%), Gaps = 4/206 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RKLGMT +++ EG +PVTV+ C +V ++L +GY AVQVG ++ ++KP Sbjct: 5 LLGRKLGMTRIFSAEGVALPVTVIEAGPCYIVQKKSLAADGYDAVQVGFIRKRLDKLTKP 64 Query: 65 MRGFFSSVNV-SPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 ++G + S + L EFR++ DL VG S F +G+ VDV G + G+GF+G Sbjct: 65 LQGHYEKHGFKSGFRFLKEFRLESISDL-EVGQELDVSQFEIGERVDVVGFSKGRGFAGV 123 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR F THG S+SHR+ GS G P RVFK KK+ GRMG RVT LEVV V Sbjct: 124 IKRWGFQRGPETHG-SMSHRAPGSIGASAYPSRVFKGKKLPGRMGNARVTTLTLEVVDVR 182 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDS 209 + L+++KG VPGA ++ +L++ S Sbjct: 183 PESNLLILKGAVPGA-RHGLLLIKKS 207 >gi|91786167|ref|YP_547119.1| 50S ribosomal protein L3 [Polaromonas sp. JS666] gi|123165529|sp|Q12GX1|RL3_POLSJ RecName: Full=50S ribosomal protein L3 gi|91695392|gb|ABE42221.1| LSU ribosomal protein L3P [Polaromonas sp. JS666] Length = 227 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 88/211 (41%), Positives = 126/211 (59%), Gaps = 3/211 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G +PVTV+ + N +V +T +GY A+QV G K V+K Sbjct: 8 GLLGRKVGMMRLFTDDGDTVPVTVVDVSNNRVTQVKTEANDGYDALQVAFGARKASRVTK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVF-SPSYFTVGQLVDVTGMTIGKGFS 121 P G + V + L EFRV D G+V + F VGQLVDV G +IGKG++ Sbjct: 68 PAAGHLAKAGVEAGEILKEFRVTADVAGKYAAGTVVPAADVFAVGQLVDVQGTSIGKGYA 127 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHN RA+HG S SH GS G QDPGRVF K+M G +G VT +NL +V Sbjct: 128 GTIKRHNMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTVTTQNLNIVR 187 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D+ R L++++G VPG+ K ++ VR + K+ Sbjct: 188 IDEARQLLMIRGAVPGS-KGGFVTVRAAIKA 217 >gi|229829429|ref|ZP_04455498.1| hypothetical protein GCWU000342_01519 [Shuttleworthia satelles DSM 14600] gi|229791860|gb|EEP27974.1| hypothetical protein GCWU000342_01519 [Shuttleworthia satelles DSM 14600] Length = 227 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 93/230 (40%), Positives = 128/230 (55%), Gaps = 23/230 (10%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52 M ++A K+GMT ++N +G IPVTVL C V +TL+ +GY AVQVG Sbjct: 1 MNKAILATKVGMTQIFNEDGVLIPVTVLQAGPCAVTQVKTLENDGYEAVQVGFVDKKDKI 60 Query: 53 -----AGEAKVKN---VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 AG +V + V+KP++G F+ V KK + EFR + + +G F Sbjct: 61 NTKDAAGRKEVHHRHGVNKPLKGHFAKAGVEGKKYVREFRFENASEY-KLGDEIKADIFA 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRA--THGVSISHRSHGSTGCRQDPGRVFKNKK 162 G VD T ++ GKGF GA+KR G R HG S HR GS G DP +VFK K Sbjct: 120 EGDKVDATAISKGKGFQGAIKR--LGQHRGPMAHG-SKFHRHQGSNGAASDPSKVFKGKG 176 Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 M G MG +VT++NLEVV VD + L+L+KG VPG K+ S + +++S K+ Sbjct: 177 MPGHMGSVKVTIQNLEVVKVDAENNLLLIKGAVPGPKR-SLVTIKESVKA 225 >gi|288803933|ref|ZP_06409356.1| 50S ribosomal protein L3 [Prevotella melaninogenica D18] gi|302345074|ref|YP_003813427.1| 50S ribosomal protein L3 [Prevotella melaninogenica ATCC 25845] gi|288333566|gb|EFC72018.1| 50S ribosomal protein L3 [Prevotella melaninogenica D18] gi|302150099|gb|ADK96361.1| 50S ribosomal protein L3 [Prevotella melaninogenica ATCC 25845] Length = 204 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 86/203 (42%), Positives = 126/203 (62%), Gaps = 4/203 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G GEAK K SK Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G F +PKK L EF+ ++ +L G + F+ + VDV G + GKGF G Sbjct: 63 PQQGHFKKAGTTPKKHLAEFKFDEEYNL---GDTVTVELFSNAKFVDVVGTSKGKGFQGV 119 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ ++THG R GS G P +VFK +M G+MGG+RVT +NL+V+ V Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205 + LILVKG V G ++ I+ Sbjct: 180 IPEHNLILVKGSVAGCNGSTVII 202 >gi|326803033|ref|YP_004320851.1| 50S ribosomal protein L3 [Aerococcus urinae ACS-120-V-Col10a] gi|326651005|gb|AEA01188.1| 50S ribosomal protein L3 [Aerococcus urinae ACS-120-V-Col10a] Length = 211 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 89/215 (41%), Positives = 127/215 (59%), Gaps = 7/215 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT + G +PVTV+ V+ +TL+ +GY AVQ+G + + Sbjct: 1 MTKGILGKKVGMTQFFTESGELVPVTVIEAQANVVLQVKTLENDGYEAVQLGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118 +KP +G + +PK+ + EF KD +L VGS F G +VDVTG + GK Sbjct: 61 ANKPEQGHVAKAETTPKRFIREF---KDVELGEYEVGSEVKVDIFQEGDIVDVTGTSKGK 117 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF GA+KRH +HG S HR+ GS G D +VFK K + G+MGGN VT++NLE Sbjct: 118 GFQGAIKRHGQQRGPMSHG-SHYHRAAGSMGMASDASKVFKGKNLPGQMGGNTVTIQNLE 176 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +V V + +ILVKG VPGAKK S + ++ + KSA Sbjct: 177 IVKVMADKNVILVKGNVPGAKK-SLVEIKTAAKSA 210 >gi|224283709|ref|ZP_03647031.1| Ribosomal protein L3 [Bifidobacterium bifidum NCIMB 41171] gi|310288024|ref|YP_003939283.1| 50S ribosomal protein L3 [Bifidobacterium bifidum S17] gi|311064897|ref|YP_003971623.1| 50S ribosomal protein L3 RplC [Bifidobacterium bifidum PRL2010] gi|313140865|ref|ZP_07803058.1| 50S ribosomal protein L3 [Bifidobacterium bifidum NCIMB 41171] gi|309251961|gb|ADO53709.1| 50S ribosomal protein L3 [Bifidobacterium bifidum S17] gi|310867217|gb|ADP36586.1| RplC 50S ribosomal protein L3 [Bifidobacterium bifidum PRL2010] gi|313133375|gb|EFR50992.1| 50S ribosomal protein L3 [Bifidobacterium bifidum NCIMB 41171] Length = 217 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 81/209 (38%), Positives = 119/209 (56%), Gaps = 2/209 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RKLGMT V++ G +PVT++ + V ++ + +GY A+Q+G G+ V+KP Sbjct: 11 LLGRKLGMTQVWDENGFFVPVTLVDVSTNVVTAVKSEETDGYKAIQIGYGQIDPTKVTKP 70 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + G F+ V+P++ L E R + + P G S F G VDVTG T GKGF+G + Sbjct: 71 LAGHFAKAGVTPRRHLVEVRTEDAAEYEP-GQELSIDAFAEGSEVDVTGTTKGKGFAGTI 129 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR F R THG + R GS G P R+ K K+MAGRMG TV++L V+S D Sbjct: 130 KRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTATVQSLTVMSADA 189 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + ++ +KG +PG K +LVR + K A Sbjct: 190 ENNVLAIKGAIPGP-KGGIVLVRTAVKGA 217 >gi|163815975|ref|ZP_02207345.1| hypothetical protein COPEUT_02155 [Coprococcus eutactus ATCC 27759] gi|158448785|gb|EDP25780.1| hypothetical protein COPEUT_02155 [Coprococcus eutactus ATCC 27759] Length = 227 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 90/228 (39%), Positives = 126/228 (55%), Gaps = 19/228 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--- 57 M+ ++A+K+GMT +++ G PVTVL C V +T++ +GY A+QVG GE K Sbjct: 1 MKKAILAKKVGMTQIFDENGVLTPVTVLQAGPCVVTQIKTVENDGYDAIQVGFGEKKERV 60 Query: 58 -VKNVS------------KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 K+VS K G +PK EFR++ + +G+ F Sbjct: 61 TTKDVSGKKVIRNPHGAGKAEVGHAKKAGTTPKTFYREFRLENTAEY-ELGAEIKADVFA 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G +DVT + GKG++G +KRH + HG S HR GS G PGRVFK KKM Sbjct: 120 AGDKIDVTAKSKGKGYAGGLKRHGLKSGPSGHG-SKYHRHAGSNGSATTPGRVFKGKKMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G MG RVT++NLEVV +D + +ILVKG VPG KK S ++++D+ KS Sbjct: 179 GHMGNVRVTIQNLEVVKIDVENNVILVKGAVPGPKK-SLVMIKDTVKS 225 >gi|86141140|ref|ZP_01059686.1| 50S ribosomal protein L3 [Leeuwenhoekiella blandensis MED217] gi|85831699|gb|EAQ50154.1| 50S ribosomal protein L3 [Leeuwenhoekiella blandensis MED217] Length = 203 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 84/206 (40%), Positives = 122/206 (59%), Gaps = 6/206 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G +AK N Sbjct: 2 SGLIGKKVGMTSIFDENGKNIPCTVIEAGPCVVTQVRTEEVDGYSALQLGFDDAKTAN-- 59 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K +G K+K+ EF Q + +G + F GQ VDV G + GKGF G Sbjct: 60 KAAQGHAKKAGTVAKRKVVEF--QDFEGEYKLGDAVTVEVFKEGQFVDVAGTSKGKGFQG 117 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG+ ++THG R+ GS G P RVFK +MAG+MG RV V+NL V+ Sbjct: 118 VVKRHGFGGVGQSTHGQHNRLRAPGSIGAASYPSRVFKGMRMAGQMGNERVKVQNLRVLK 177 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L++VKGCVPG KNS++++ Sbjct: 178 VVAEKNLLVVKGCVPG-HKNSYVIIE 202 >gi|317126861|ref|YP_004093143.1| 50S ribosomal protein L3 [Bacillus cellulosilyticus DSM 2522] gi|315471809|gb|ADU28412.1| 50S ribosomal protein L3 [Bacillus cellulosilyticus DSM 2522] Length = 211 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 86/215 (40%), Positives = 125/215 (58%), Gaps = 4/215 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G +PVTV+ V+ +T + GY A+Q+G + K Sbjct: 1 MAKGILGKKIGMTQIFAENGEVVPVTVIEATPNVVLQKKTTEGEGYEAIQLGFDDKKQIQ 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G +PK+ + EFR+ + +G F VG +VDVTG + GKGF Sbjct: 61 QTKPAKGHAEKAKTNPKRFVKEFRLSNVAEY-EIGQEVKVDTFAVGDIVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRHN +HG S HR GS G DP V K K + GRMGG +VT++NLE+V Sbjct: 120 QGAIKRHNQSRGPMSHG-SRYHRRPGSMGPV-DPNHVRKGKLLPGRMGGEQVTIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 VD +R L+LVKG VPGA+K S++ V+ + K+ Sbjct: 178 RVDTERNLLLVKGNVPGARK-SYVTVQSAVKATAE 211 >gi|228898863|ref|ZP_04063145.1| 50S ribosomal protein L3 [Bacillus thuringiensis IBL 4222] gi|228905907|ref|ZP_04069804.1| 50S ribosomal protein L3 [Bacillus thuringiensis IBL 200] gi|228937413|ref|ZP_04100059.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228963210|ref|ZP_04124379.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar sotto str. T04001] gi|228976869|ref|ZP_04137281.1| 50S ribosomal protein L3 [Bacillus thuringiensis Bt407] gi|229009619|ref|ZP_04166845.1| 50S ribosomal protein L3 [Bacillus mycoides DSM 2048] gi|229015512|ref|ZP_04172510.1| 50S ribosomal protein L3 [Bacillus cereus AH1273] gi|229021721|ref|ZP_04178303.1| 50S ribosomal protein L3 [Bacillus cereus AH1272] gi|229027958|ref|ZP_04184111.1| 50S ribosomal protein L3 [Bacillus cereus AH1271] gi|229074171|ref|ZP_04207217.1| 50S ribosomal protein L3 [Bacillus cereus Rock4-18] gi|229083430|ref|ZP_04215778.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-44] gi|229094832|ref|ZP_04225837.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-29] gi|229100909|ref|ZP_04231713.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-28] gi|229113786|ref|ZP_04243221.1| 50S ribosomal protein L3 [Bacillus cereus Rock1-3] gi|229165098|ref|ZP_04292893.1| 50S ribosomal protein L3 [Bacillus cereus AH621] gi|229170961|ref|ZP_04298562.1| 50S ribosomal protein L3 [Bacillus cereus MM3] gi|228612501|gb|EEK69722.1| 50S ribosomal protein L3 [Bacillus cereus MM3] gi|228618361|gb|EEK75391.1| 50S ribosomal protein L3 [Bacillus cereus AH621] gi|228669657|gb|EEL25064.1| 50S ribosomal protein L3 [Bacillus cereus Rock1-3] gi|228682488|gb|EEL36561.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-28] gi|228688575|gb|EEL42448.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-29] gi|228699863|gb|EEL52500.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-44] gi|228708941|gb|EEL61068.1| 50S ribosomal protein L3 [Bacillus cereus Rock4-18] gi|228733346|gb|EEL84175.1| 50S ribosomal protein L3 [Bacillus cereus AH1271] gi|228739589|gb|EEL90003.1| 50S ribosomal protein L3 [Bacillus cereus AH1272] gi|228745799|gb|EEL95803.1| 50S ribosomal protein L3 [Bacillus cereus AH1273] gi|228751641|gb|EEM01441.1| 50S ribosomal protein L3 [Bacillus mycoides DSM 2048] gi|228782839|gb|EEM31005.1| 50S ribosomal protein L3 [Bacillus thuringiensis Bt407] gi|228796468|gb|EEM43907.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar sotto str. T04001] gi|228822246|gb|EEM68228.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228853722|gb|EEM98482.1| 50S ribosomal protein L3 [Bacillus thuringiensis IBL 200] gi|228860763|gb|EEN05141.1| 50S ribosomal protein L3 [Bacillus thuringiensis IBL 4222] Length = 199 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 88/200 (44%), Positives = 124/200 (62%), Gaps = 4/200 (2%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V+ G IPVTV+ + V+ +T + +GY A+Q+G + + K +KP +G + Sbjct: 1 MTQVFAENGELIPVTVIAANPNVVLQKKTTETDGYNAIQLGFEDKREKLTNKPEQGHTAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 + +PK+ + E R D D L VG F G++VDVTG++ GKGF G +KRH Sbjct: 61 ASTTPKRFIREIR-DADVDGLEVGQEVKVEVFAAGEIVDVTGISKGKGFQGVIKRHGQSR 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 +HG S HR GS G P RVFK KK+AGRMGG++VT++NLE+V VD +R L+LV Sbjct: 120 GPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIVQVDTERNLLLV 177 Query: 192 KGCVPGAKKNSWILVRDSFK 211 KG VPGAKK S ++V+ + K Sbjct: 178 KGNVPGAKK-SLVVVQGAVK 196 >gi|260061897|ref|YP_003194977.1| 50S ribosomal protein L3 [Robiginitalea biformata HTCC2501] gi|88786030|gb|EAR17199.1| 50S ribosomal protein L3 [Robiginitalea biformata HTCC2501] Length = 196 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 81/197 (41%), Positives = 117/197 (59%), Gaps = 3/197 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT +++ G+ IP TV+ C V RT + +GY A+Q+G + K +K G F Sbjct: 1 MTSIFDENGKNIPCTVIEAGPCVVTQVRTEEVDGYNALQLGFDDKADKRANKAENGHFKK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 +PKKK+ EFR ++ +G + F G+ VDV G++ GKGF G +KRH FGG Sbjct: 61 AGTAPKKKVVEFRYF-EEGAFKLGDTINVELFKEGEFVDVNGISKGKGFQGVVKRHGFGG 119 Query: 132 L-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190 + ++THG R+ GS G DP RVFK KMAG+MG RVTV+NL V+ V ++ L++ Sbjct: 120 VGQSTHGQHNRLRAPGSIGAASDPSRVFKGMKMAGQMGNQRVTVQNLRVLKVVPEKNLLV 179 Query: 191 VKGCVPGAKKNSWILVR 207 +KG VPG KN++I + Sbjct: 180 LKGAVPG-HKNAYITIE 195 >gi|225436243|ref|XP_002271466.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 281 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 82/199 (41%), Positives = 113/199 (56%), Gaps = 2/199 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62 GV+A KLGM + EG+ +PVTV+ +V +T +GY AVQVG + + ++ Sbjct: 67 GVMATKLGMMSYFEPEGKVVPVTVVGFREGNIVTQVKTEATDGYSAVQVGYRRVRDRKLT 126 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G P + L EFR+ D P + F G LVDV+G+TIGKGF G Sbjct: 127 KPEMGHLEKAGTIPMRHLQEFRLVSVDGFEPNQKLVFEELFKEGDLVDVSGITIGKGFQG 186 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHNF THG S SHR+ GS G PG V+K KKM GRMGG + ++ L++V + Sbjct: 187 GIKRHNFRRGPMTHG-SKSHRALGSIGAGTTPGHVYKGKKMPGRMGGTKTKIRKLKIVKI 245 Query: 183 DDKRGLILVKGCVPGAKKN 201 D+ ++++KG VPG N Sbjct: 246 DNDLRVVMIKGAVPGKPGN 264 >gi|149198922|ref|ZP_01875963.1| 50S ribosomal protein L3 [Lentisphaera araneosa HTCC2155] gi|149137917|gb|EDM26329.1| 50S ribosomal protein L3 [Lentisphaera araneosa HTCC2155] Length = 210 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 86/197 (43%), Positives = 119/197 (60%), Gaps = 4/197 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 +G++ +KLGMT VY+ +GR +PVTV+ C V+ +T DK+ Y A+Q+G G + KNVS Sbjct: 2 TGIIGKKLGMTQVYDDKGRLVPVTVIEAGPCPVLDVKTNDKDSYSALQIGFGSKRAKNVS 61 Query: 63 KPMRGFFSSVN--VSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 K + G + N +P + E R++ D D VGSV + F+ VDV G T G+GF Sbjct: 62 KAVLGHLAKSNNQENPPALIKEIRLEADSD-KEVGSVLTVEEFSDIAYVDVIGTTKGRGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NFGG RA+HG R GS G PGRVFK KKM G MG + T + L+V+ Sbjct: 121 QGVVKRWNFGGGRASHGGDW-ERKGGSIGMCNWPGRVFKGKKMPGHMGSVQRTSQGLKVI 179 Query: 181 SVDDKRGLILVKGCVPG 197 V + +++VKG VPG Sbjct: 180 QVRPEENILMVKGAVPG 196 >gi|310829585|ref|YP_003961942.1| ribosomal protein L3 [Eubacterium limosum KIST612] gi|308741319|gb|ADO38979.1| ribosomal protein L3 [Eubacterium limosum KIST612] Length = 209 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 82/212 (38%), Positives = 118/212 (55%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT ++ G +PVTV+ C VV + +D +GY AVQ+ G+ K K Sbjct: 1 MKKAIIGKKIGMTQIFTENGTVVPVTVVEAGPCVVVQKKNMDVDGYEAVQLAYGDVKEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G + V KK + EF++ D D G V F G VD++G + GKGF Sbjct: 61 VTKPLKGHYDKHGVEYKKVIREFKLD-DYDAFETGQVIKADMFEAGDKVDISGKSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HRS GS G P RV K K + G+MG VT NLEVV Sbjct: 120 QGVIKRHGQSRGPMAHG-SKYHRSPGSMGASAYPARVMKGKNLPGQMGNKNVTALNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V + ++L+KG VPG + S + ++ S K+ Sbjct: 179 QVSAEDNILLIKGAVPGP-RGSLVSIKSSVKA 209 >gi|228925363|ref|ZP_04088459.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228931612|ref|ZP_04094518.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228943916|ref|ZP_04106301.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228950658|ref|ZP_04112792.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228956551|ref|ZP_04118347.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229041015|ref|ZP_04189778.1| 50S ribosomal protein L3 [Bacillus cereus AH676] gi|229067875|ref|ZP_04201192.1| 50S ribosomal protein L3 [Bacillus cereus F65185] gi|229077410|ref|ZP_04210063.1| 50S ribosomal protein L3 [Bacillus cereus Rock4-2] gi|229107796|ref|ZP_04237432.1| 50S ribosomal protein L3 [Bacillus cereus Rock1-15] gi|229119772|ref|ZP_04249033.1| 50S ribosomal protein L3 [Bacillus cereus 95/8201] gi|229125627|ref|ZP_04254659.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-Cer4] gi|229136956|ref|ZP_04265583.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST26] gi|229142916|ref|ZP_04271357.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST24] gi|229148519|ref|ZP_04276775.1| 50S ribosomal protein L3 [Bacillus cereus m1550] gi|229159283|ref|ZP_04287307.1| 50S ribosomal protein L3 [Bacillus cereus R309803] gi|229176710|ref|ZP_04304114.1| 50S ribosomal protein L3 [Bacillus cereus 172560W] gi|228606753|gb|EEK64170.1| 50S ribosomal protein L3 [Bacillus cereus 172560W] gi|228624175|gb|EEK80977.1| 50S ribosomal protein L3 [Bacillus cereus R309803] gi|228634935|gb|EEK91508.1| 50S ribosomal protein L3 [Bacillus cereus m1550] gi|228640537|gb|EEK96926.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST24] gi|228646494|gb|EEL02701.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST26] gi|228657819|gb|EEL13625.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-Cer4] gi|228663673|gb|EEL19252.1| 50S ribosomal protein L3 [Bacillus cereus 95/8201] gi|228675645|gb|EEL30853.1| 50S ribosomal protein L3 [Bacillus cereus Rock1-15] gi|228705901|gb|EEL58234.1| 50S ribosomal protein L3 [Bacillus cereus Rock4-2] gi|228715234|gb|EEL67093.1| 50S ribosomal protein L3 [Bacillus cereus F65185] gi|228727312|gb|EEL78506.1| 50S ribosomal protein L3 [Bacillus cereus AH676] gi|228803116|gb|EEM49938.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228809009|gb|EEM55494.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228815749|gb|EEM61985.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228828040|gb|EEM73768.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228834285|gb|EEM79826.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 199 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 88/200 (44%), Positives = 124/200 (62%), Gaps = 4/200 (2%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V+ G IPVTV+ + V+ +T + +GY A+Q+G + + K +KP +G + Sbjct: 1 MTQVFAENGELIPVTVIAANPNVVLQKKTTETDGYNAIQLGFEDKREKLTNKPEQGHTAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 + +PK+ + E R D D L VG F G++VDVTG++ GKGF G +KRH Sbjct: 61 ASTTPKRFIREIR-DADVDGLEVGQEVKVDVFATGEIVDVTGISKGKGFQGVIKRHGQSR 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 +HG S HR GS G P RVFK KK+AGRMGG++VT++NLE+V VD +R L+LV Sbjct: 120 GPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIVQVDTERNLLLV 177 Query: 192 KGCVPGAKKNSWILVRDSFK 211 KG VPGAKK S ++V+ + K Sbjct: 178 KGNVPGAKK-SLVVVQGAVK 196 >gi|226309808|ref|YP_002769702.1| 50S ribosomal protein L3 [Brevibacillus brevis NBRC 100599] gi|254803658|sp|C0ZII0|RL3_BREBN RecName: Full=50S ribosomal protein L3 gi|226092756|dbj|BAH41198.1| 50S ribosomal protein L3 [Brevibacillus brevis NBRC 100599] Length = 209 Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 86/211 (40%), Positives = 124/211 (58%), Gaps = 4/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT V+ G VTV+ + + V+ + ++ +GY A+Q+G + K + Sbjct: 1 MTKGILGKKLGMTQVFGPNGTATAVTVIEVGSNVVLQKKDVETDGYEAIQIGFEDKKEQR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + E R D VG F G++VDV G++ GKGF Sbjct: 61 ANKPEKGHAAKANTAPKRFIREIRGVNLADY-EVGQELKADIFAEGEMVDVAGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRHN HG S HR GS G P RVFK + + G+MGG+ VT++NLEV+ Sbjct: 120 QGAIKRHNQSRGPMAHG-SRYHRGPGSMGAVA-PNRVFKGQTLPGQMGGDNVTIQNLEVI 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L+LVKG VPG KNS +LV + K Sbjct: 178 KVDTERNLVLVKGSVPGP-KNSCVLVSTAVK 207 >gi|229542203|ref|ZP_04431263.1| ribosomal protein L3 [Bacillus coagulans 36D1] gi|229326623|gb|EEN92298.1| ribosomal protein L3 [Bacillus coagulans 36D1] Length = 209 Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 88/212 (41%), Positives = 123/212 (58%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+Q+G + + Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTVETDGYEAIQLGFADKPERL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G S N +PK+ + EF D VG F G +VDVTG+T GKGF Sbjct: 61 ANKPEKGHVSKANAAPKRFIREFSGVNTSDF-EVGQEVKVDIFAEGDIVDVTGVTKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFK K + GRMGG RVTV+NL++V Sbjct: 120 QGVIKRHGQHRGPMAHG-SRYHRRPGSMGPIA-PNRVFKQKALPGRMGGERVTVQNLQIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPG +K + + V+ + K+ Sbjct: 178 KVDAERNLLLIKGNVPGPRK-ALVTVKAAVKA 208 >gi|320103617|ref|YP_004179208.1| 50S ribosomal protein L3P [Isosphaera pallida ATCC 43644] gi|319750899|gb|ADV62659.1| LSU ribosomal protein L3P [Isosphaera pallida ATCC 43644] Length = 212 Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 87/210 (41%), Positives = 120/210 (57%), Gaps = 3/210 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT +Y +G+ +PVTVL C V+ +T + +GY AVQ+G + K K Sbjct: 1 MVVGLLGRKVGMTQIYREDGQAVPVTVLECGPCTVLQVKTPETDGYCAVQLGYLDRKRKT 60 Query: 61 VSKPMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + RG N PK+ + E R Q + L +G + S F + VDVTG++ G+G Sbjct: 61 ATAAARGHARKAGNAEPKRYIREIR-QDEPPTLKLGDQLTVSVFEAIKRVDVTGVSKGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRH F GLRATHGV HR GS+G DP R K + G G +VT NLEV Sbjct: 120 FAGVVKRHGFRGLRATHGVKRMHRHPGSSGPSADPSRTRKGIRKPGHFGHAKVTALNLEV 179 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 V VD L++VKG VPG ++ VR + Sbjct: 180 VKVDPDANLLVVKGAVPGP-NGGFVTVRQT 208 >gi|312899043|ref|ZP_07758427.1| 50S ribosomal protein L3 [Megasphaera micronuciformis F0359] gi|310619828|gb|EFQ03404.1| 50S ribosomal protein L3 [Megasphaera micronuciformis F0359] Length = 212 Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 93/213 (43%), Positives = 128/213 (60%), Gaps = 5/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ +KLGMT V+ EG +PVTV+ VV +T+D +GY ++Q+G GE K K+ Sbjct: 1 MSKAILGKKLGMTQVFTEEGAVVPVTVVEASPNVVVRVKTVDTDGYNSIQLGYGEIKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP++G F VSP K L E R+ D VG + F G LVDV G T GKGF Sbjct: 61 LTKPVKGQFDKAGVSPVKHLRELRLT-DTPEYTVGQTLAADIFASGDLVDVVGTTKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTG--CRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KRH F HG S SHR GS G G+V K KK+ G+MGGN+ TV +L Sbjct: 120 AGTIKRHGFHRGPMGHG-SKSHREPGSLGPMISGGGGKVIKGKKLPGQMGGNQATVLHLS 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VV VD ++ +IL+KG +PG K S +++RD+ K Sbjct: 179 VVKVDTEKNIILIKGGIPGP-KGSIVMIRDTVK 210 >gi|293375389|ref|ZP_06621670.1| 50S ribosomal protein L3 [Turicibacter sanguinis PC909] gi|325844417|ref|ZP_08168144.1| 50S ribosomal protein L3 [Turicibacter sp. HGF1] gi|292645942|gb|EFF63971.1| 50S ribosomal protein L3 [Turicibacter sanguinis PC909] gi|325489091|gb|EGC91475.1| 50S ribosomal protein L3 [Turicibacter sp. HGF1] Length = 209 Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 124/212 (58%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT +++ EG+ IPVTV+ V+ +T + +GY AVQVG + K Sbjct: 1 MAKGILGRKIGMTQIFSEEGKLIPVTVVQATPNVVLQVKTNETDGYEAVQVGFETKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G + +PK+ + EFR D VG F G++VDVTG T GKGF Sbjct: 61 ANKPEMGHVAKAETAPKRFIREFR-NLDVAEYQVGQEIKVDTFAEGEIVDVTGKTKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G RV K KK+ G+ GGN VTV+NLE+V Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGSIA-ANRVLKGKKLPGQTGGNIVTVQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R ++L+KG VPGAKK S ++VR + K+ Sbjct: 178 KVDTERNVLLIKGNVPGAKK-SLVMVRSAVKA 208 >gi|323354876|gb|EGA86709.1| Mrpl9p [Saccharomyces cerevisiae VL3] Length = 148 Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 73/147 (49%), Positives = 101/147 (68%), Gaps = 1/147 (0%) Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M G F+S V+PK+ + EFRV+ + L+P G++ PS+F GQ VDV ++ GKGF+G M Sbjct: 1 MLGHFASKVVNPKEXVAEFRVKDEKGLIPPGTLLKPSFFKEGQYVDVRSVSKGKGFTGVM 60 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR+ F GLRA+HG SI HR GS G QDPGRV +KM G MG VT++N++V+ VDD Sbjct: 61 KRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVLKVDD 120 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211 + +I VKG V G KNS++ ++D+ K Sbjct: 121 ENNVIWVKGSVAGP-KNSFVKIQDAIK 146 >gi|16804670|ref|NP_466155.1| 50S ribosomal protein L3 [Listeria monocytogenes EGD-e] gi|46908804|ref|YP_015193.1| 50S ribosomal protein L3 [Listeria monocytogenes str. 4b F2365] gi|47094372|ref|ZP_00232066.1| ribosomal protein L3 [Listeria monocytogenes str. 4b H7858] gi|217966169|ref|YP_002351847.1| ribosomal protein L3 [Listeria monocytogenes HCC23] gi|224499305|ref|ZP_03667654.1| 50S ribosomal protein L3 [Listeria monocytogenes Finland 1988] gi|224503574|ref|ZP_03671881.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL R2-561] gi|226225177|ref|YP_002759284.1| ribosomal protein L3 [Listeria monocytogenes Clip81459] gi|254825007|ref|ZP_05230008.1| ribosomal protein L3 [Listeria monocytogenes FSL J1-194] gi|254829081|ref|ZP_05233768.1| ribosomal protein L3 [Listeria monocytogenes FSL N3-165] gi|254830936|ref|ZP_05235591.1| 50S ribosomal protein L3 [Listeria monocytogenes 10403S] gi|254854162|ref|ZP_05243510.1| ribosomal protein L3 [Listeria monocytogenes FSL R2-503] gi|254899917|ref|ZP_05259841.1| 50S ribosomal protein L3 [Listeria monocytogenes J0161] gi|254912877|ref|ZP_05262889.1| 50S ribosomal protein L3 [Listeria monocytogenes J2818] gi|254931098|ref|ZP_05264457.1| ribosomal protein L3 [Listeria monocytogenes HPB2262] gi|254937257|ref|ZP_05268954.1| ribosomal protein L3 [Listeria monocytogenes F6900] gi|254991854|ref|ZP_05274044.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL J2-064] gi|255027144|ref|ZP_05299130.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL J2-003] gi|255029693|ref|ZP_05301644.1| 50S ribosomal protein L3 [Listeria monocytogenes LO28] gi|255519640|ref|ZP_05386877.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL J1-175] gi|284800482|ref|YP_003412347.1| 50S ribosomal protein L3 [Listeria monocytogenes 08-5578] gi|284993668|ref|YP_003415436.1| 50S ribosomal protein L3 [Listeria monocytogenes 08-5923] gi|290891817|ref|ZP_06554814.1| ribosomal protein L3 [Listeria monocytogenes FSL J2-071] gi|300763617|ref|ZP_07073615.1| ribosomal protein L3 [Listeria monocytogenes FSL N1-017] gi|42559668|sp|Q8Y440|RL3_LISMO RecName: Full=50S ribosomal protein L3 gi|67461150|sp|Q71WE6|RL3_LISMF RecName: Full=50S ribosomal protein L3 gi|254803678|sp|B8DB08|RL3_LISMH RecName: Full=50S ribosomal protein L3 gi|259709728|sp|C1KZI0|RL3_LISMC RecName: Full=50S ribosomal protein L3 gi|16412120|emb|CAD00710.1| ribosomal protein L3 [Listeria monocytogenes EGD-e] gi|46882077|gb|AAT05370.1| ribosomal protein L3 [Listeria monocytogenes serotype 4b str. F2365] gi|47017254|gb|EAL08093.1| ribosomal protein L3 [Listeria monocytogenes str. 4b H7858] gi|217335439|gb|ACK41233.1| ribosomal protein L3 [Listeria monocytogenes HCC23] gi|225877639|emb|CAS06353.1| ribosomal protein L3 [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258601491|gb|EEW14816.1| ribosomal protein L3 [Listeria monocytogenes FSL N3-165] gi|258607554|gb|EEW20162.1| ribosomal protein L3 [Listeria monocytogenes FSL R2-503] gi|258609863|gb|EEW22471.1| ribosomal protein L3 [Listeria monocytogenes F6900] gi|284056044|gb|ADB66985.1| 50S ribosomal protein L3 [Listeria monocytogenes 08-5578] gi|284059135|gb|ADB70074.1| 50S ribosomal protein L3 [Listeria monocytogenes 08-5923] gi|290558411|gb|EFD91928.1| ribosomal protein L3 [Listeria monocytogenes FSL J2-071] gi|293582645|gb|EFF94677.1| ribosomal protein L3 [Listeria monocytogenes HPB2262] gi|293590876|gb|EFF99210.1| 50S ribosomal protein L3 [Listeria monocytogenes J2818] gi|293594248|gb|EFG02009.1| ribosomal protein L3 [Listeria monocytogenes FSL J1-194] gi|300515894|gb|EFK42943.1| ribosomal protein L3 [Listeria monocytogenes FSL N1-017] gi|307572221|emb|CAR85400.1| rplC [Listeria monocytogenes L99] gi|328468116|gb|EGF39122.1| 50S ribosomal protein L3 [Listeria monocytogenes 1816] gi|328469805|gb|EGF40722.1| 50S ribosomal protein L3 [Listeria monocytogenes 220] Length = 209 Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 84/212 (39%), Positives = 127/212 (59%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGRKVGMTQVFTENGELIPVTVIEAAQNVVLQKKTVETDGYEAVQIGFEDKRAIL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EFR + D +G+ F G ++D TG++ GKGF Sbjct: 61 SNKPEQGHVAKANTTPKRFIREFR-DVNLDEYEIGAEVKVDVFAEGDIIDATGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK + GRMGG ++T++NLE+V Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQITIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++ ++LVKG VPGAKK + + ++ + K+ Sbjct: 178 KVDVEKNVLLVKGNVPGAKK-ALVQIKTATKA 208 >gi|291518045|emb|CBK73266.1| LSU ribosomal protein L3P [Butyrivibrio fibrisolvens 16/4] Length = 227 Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 96/230 (41%), Positives = 124/230 (53%), Gaps = 23/230 (10%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK- 59 M+ ++A K+GMT V+N G IPVTVL C V +T++ +GY AVQVG + KVK Sbjct: 1 MKKAILATKVGMTQVFNEGGELIPVTVLSAGPCVVTQIKTVENDGYDAVQVGFVDKKVKL 60 Query: 60 ---------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V+KP +G F V PK+ + EFR D + F Sbjct: 61 VNKDANGRKEIIHRNGVNKPEKGHFDKAGVEPKRFVREFRFDNCADYA-LAQEIKADIFE 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRA--THGVSISHRSHGSTGCRQDPGRVFKNKK 162 G VD T + GKGF GA+KR G R HG S HR GS G P RVFK K Sbjct: 120 AGDKVDATATSKGKGFQGAIKR--LGQHRGPMAHG-SKFHRHQGSNGACSSPSRVFKGKG 176 Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 M G+MGG RVT++NLE+V VD + L+LVKG VPG KK S + +++S K+ Sbjct: 177 MPGQMGGTRVTIQNLEIVRVDVENNLLLVKGAVPGPKK-SLVTIKESVKA 225 >gi|210623188|ref|ZP_03293627.1| hypothetical protein CLOHIR_01577 [Clostridium hiranonis DSM 13275] gi|210153725|gb|EEA84731.1| hypothetical protein CLOHIR_01577 [Clostridium hiranonis DSM 13275] Length = 209 Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 91/210 (43%), Positives = 134/210 (63%), Gaps = 4/210 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ EG IPVTV+ + V +T++ +GY A+QVG +AK K+++K Sbjct: 3 GILGKKVGMTQIFTEEGVVIPVTVVEVGPVVVTQVKTIENDGYNAIQVGFEDAKEKSLNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G ++ NV KK L EFRV+ + VG F G +DVTG++ GKGF G Sbjct: 63 PAKGHLAAANVL-KKHLKEFRVENAAEYT-VGQEIKADIFEAGAKIDVTGISKGKGFQGP 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KRH THG S HR GS G PGRVFKNKK+AG MG +VT++NL++V VD Sbjct: 121 IKRHGQSRGPETHG-SRYHRRPGSMGACSYPGRVFKNKKLAGHMGSVKVTIQNLDLVRVD 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++ L+LVKG +PGA K S + ++++ K++ Sbjct: 180 AEKNLMLVKGAIPGA-KGSVVTIKEAVKAS 208 >gi|260592765|ref|ZP_05858223.1| 50S ribosomal protein L3 [Prevotella veroralis F0319] gi|260535296|gb|EEX17913.1| 50S ribosomal protein L3 [Prevotella veroralis F0319] Length = 204 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 87/203 (42%), Positives = 125/203 (61%), Gaps = 4/203 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G GEAK K SK Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G F SPKK L EF+ ++ +L G + F + VDV G + GKGF G Sbjct: 63 PQQGHFKKAGTSPKKHLAEFKFDEEYNL---GDTITVELFNDVKFVDVVGTSKGKGFQGV 119 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ ++THG R GS G P +VFK +M G+MGG+RVT +NL+V+ V Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205 + LILVKG V G ++ I+ Sbjct: 180 IPEHNLILVKGSVAGCNGSTVII 202 >gi|294496983|ref|YP_003560683.1| 50S ribosomal protein L3 [Bacillus megaterium QM B1551] gi|294496985|ref|YP_003560685.1| 50S ribosomal protein L3 [Bacillus megaterium QM B1551] gi|295702350|ref|YP_003595425.1| 50S ribosomal protein L3 [Bacillus megaterium DSM 319] gi|294346920|gb|ADE67249.1| 50S ribosomal protein L3 [Bacillus megaterium QM B1551] gi|294346922|gb|ADE67251.1| 50S ribosomal protein L3 [Bacillus megaterium QM B1551] gi|294800009|gb|ADF37075.1| 50S ribosomal protein L3 [Bacillus megaterium DSM 319] Length = 209 Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ + + +GY A+Q+G + + K Sbjct: 1 MAKGILGRKIGMTQVFAENGDLIPVTVIEASANVVLQVKNAETDGYEAIQLGFEDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + E R D VG F G ++DVTG++ GKGF Sbjct: 61 SNKPAKGHATKANTAPKRFIRELR-GVDASAYEVGQEVKVDIFAEGDVIDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH +HG S HR GS G P RVFK K + GRMGG R+TV+NL +V Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGERITVQNLSIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA+K S + V+ + KS Sbjct: 178 KVDAERNLLLVKGNVPGARK-SLVTVKSAVKS 208 >gi|328949277|ref|YP_004366614.1| 50S ribosomal protein L3 [Treponema succinifaciens DSM 2489] gi|328449601|gb|AEB15317.1| 50S ribosomal protein L3 [Treponema succinifaciens DSM 2489] Length = 206 Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 88/208 (42%), Positives = 125/208 (60%), Gaps = 5/208 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++A+K+GMT V++ G PVTV+ ++ VV +T +K GY AV +G + K ++K Sbjct: 3 GLIAKKVGMTQVFDENGNLTPVTVIRVEPNTVVATKTQEKCGYEAVVLGLEDLKPHKITK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P F N++PK+ L EFR + + + VG F + +DVT + GKGF G Sbjct: 63 PYAKQFPE-NITPKRHLKEFRDFEGE--VKVGDQIGVELFEKVRFIDVTATSKGKGFQGV 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR F G RATHG S HR G TGC PG KN KM GRMG +RVTV+NL+VV VD Sbjct: 120 MKRWGFHGGRATHG-SKFHREAGGTGCCTTPGHCLKNVKMPGRMGFDRVTVQNLKVVKVD 178 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 + +++V+G VPG +N ++V+ + K Sbjct: 179 PELNVLMVRGAVPGV-RNCTLIVKAAVK 205 >gi|302876534|ref|YP_003845167.1| 50S ribosomal protein L3 [Clostridium cellulovorans 743B] gi|307687207|ref|ZP_07629653.1| 50S ribosomal protein L3 [Clostridium cellulovorans 743B] gi|302579391|gb|ADL53403.1| 50S ribosomal protein L3 [Clostridium cellulovorans 743B] Length = 209 Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 84/214 (39%), Positives = 128/214 (59%), Gaps = 7/214 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT +++ + IPVTV+ C V+ +T+DK+GY A+QVG G+ + Sbjct: 1 MKKAILGKKIGMTQIFDENRKLIPVTVVEAGPCVVIQKKTIDKDGYEAIQVGFGDKRENL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KPM+G F++ V K+ + E R++ D V F F G+ VDV+G++ GKGF Sbjct: 61 FNKPMKGHFAAAGVPVKRYVKELRLE-DVSGYNVKDEFKVDIFEAGEKVDVSGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRA--THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G +KR +G R +HG S HR+ GS G DP R FKNKK+ G MG TV NL Sbjct: 120 QGTIKR--WGAHRGPMSHG-SKFHRAPGSMGASSDPSRTFKNKKLPGHMGAKNTTVMNLT 176 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V V + +IL+KG VPG K ++++R++ K+ Sbjct: 177 VAKVMVDKNIILIKGAVPGPNK-GFVVIRNAVKA 209 >gi|72382967|ref|YP_292322.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. NATL2A] gi|109893537|sp|Q46IQ9|RL3_PROMT RecName: Full=50S ribosomal protein L3 gi|72002817|gb|AAZ58619.1| LSU ribosomal protein L3P [Prochlorococcus marinus str. NATL2A] Length = 218 Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 78/209 (37%), Positives = 126/209 (60%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +GR +PVT++ C++ ++ D +GY AVQ+G + K Sbjct: 1 MSLGILGKKLGMSQLFDDQGRAVPVTLIEAGPCRITQLKSADTDGYAAVQIGFQLIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + + L E+RV+ + +G+ + F GQ VD++G T+G+GF Sbjct: 61 INKPSKGHLAKSGNDLLRHLREYRVENSSEF-ELGASITVDDFEKGQKVDISGDTMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F +HG S +HR GS G PGRV+ K+MAGRMGG +VT + LE++ Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHRLPGSIGAGTTPGRVYPGKRMAGRMGGKKVTTRALEIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +D L++VKG VPG K S + +R + Sbjct: 179 KIDTNHNLLVVKGSVPG-KPGSLLNIRPA 206 >gi|225571552|ref|ZP_03780548.1| hypothetical protein CLOHYLEM_07650 [Clostridium hylemonae DSM 15053] gi|225159629|gb|EEG72248.1| hypothetical protein CLOHYLEM_07650 [Clostridium hylemonae DSM 15053] Length = 226 Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 88/228 (38%), Positives = 125/228 (54%), Gaps = 19/228 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G PVTVL C V +T + +GY AVQVG + K K Sbjct: 1 MKKAILATKVGMTQIFNEDGTLTPVTVLQAGPCVVTQVKTAENDGYDAVQVGFVDKKEKT 60 Query: 61 V----------------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V +K +G F+ VS K+ + EF+ + + + F Sbjct: 61 VNKDKSGKKEIVHRHGVTKAEQGHFAKAGVSGKRFVREFKFENASEY-ELAQEIKADIFE 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G +D T ++ GKGF GA+KRHN THG S HR GS G DP +VFK KKM Sbjct: 120 AGDKIDATAVSKGKGFQGAIKRHNQHRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G MG ++T++NLEVV VD + L+LVKG VPG KK S + ++++ K+ Sbjct: 179 GHMGSKKITIQNLEVVRVDAENNLLLVKGSVPGPKK-SLVTIKEAVKA 225 >gi|319654868|ref|ZP_08008943.1| 50S ribosomal protein L3 [Bacillus sp. 2_A_57_CT2] gi|317393431|gb|EFV74194.1| 50S ribosomal protein L3 [Bacillus sp. 2_A_57_CT2] Length = 208 Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 87/212 (41%), Positives = 127/212 (59%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ ++++ +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVVEAAPNVVLQMKSVETDGYEAIQLGFEDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EFR D VG F G+ VDVTG++ GKGF Sbjct: 61 SNKPEKGHVAKANTAPKRFVREFR-GADLGQYEVGQEVKVDIFAEGETVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G P RVFK K + GRMGG ++TV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGEQITVQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA+K + + ++ + K+ Sbjct: 178 KVDAERNLLLIKGNVPGARK-ALVKIKSAVKA 208 >gi|269122979|ref|YP_003305556.1| 50S ribosomal protein L3 [Streptobacillus moniliformis DSM 12112] gi|268314305|gb|ACZ00679.1| ribosomal protein L3 [Streptobacillus moniliformis DSM 12112] Length = 208 Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 86/208 (41%), Positives = 125/208 (60%), Gaps = 4/208 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT ++ E + IPVTV+ VV +T++K GY ++ + E + K V+KP Sbjct: 2 ILGKKIGMTQIFENE-KLIPVTVIEAGPNFVVQTKTVEKEGYTSITLAYDEKREKLVNKP 60 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G F ++ KK L EF+V+ ++ +G + VD+ G++ GKG +G M Sbjct: 61 EMGVFKKAGITAKKFLKEFKVESVEEF-ALGQELKVDVLEGIEFVDIQGISKGKGTAGVM 119 Query: 125 KRHNFGGLRATHGVSISHRSHGS-TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 KRHNFGG RATHGVS +HR GS G V K KKMAGR+G VTV+NL+VV D Sbjct: 120 KRHNFGGNRATHGVSRNHRLGGSNAGGAASNSNVPKGKKMAGRLGNENVTVQNLKVVKFD 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 + L+LVKG VPG KN +++++ S K Sbjct: 180 VENNLLLVKGAVPGP-KNGYLVIKKSIK 206 >gi|307297394|ref|ZP_07577200.1| 50S ribosomal protein L3 [Thermotogales bacterium mesG1.Ag.4.2] gi|306916654|gb|EFN47036.1| 50S ribosomal protein L3 [Thermotogales bacterium mesG1.Ag.4.2] Length = 210 Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 87/200 (43%), Positives = 118/200 (59%), Gaps = 7/200 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG----AGEAKVK 59 G++ RKLGMT +Y +G+ VTV+ C VV +T D Y A+QVG E K Sbjct: 3 GILGRKLGMTTIYK-DGKAFGVTVVKAGPCTVVQKKTSDGGEYDAIQVGFEELTPERAKK 61 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP+ F + V P + L EF+V +D VG + F+ G+ VDVTG + G+G Sbjct: 62 VLTKPLVKKFEAAKVKPHRILKEFKVGNINDF-NVGDIIEARVFSEGEKVDVTGFSKGRG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSGAMKR NF G A+HG S HR GS G +P +++K KKM G+ G + TVKNL V Sbjct: 121 FSGAMKRWNFRGGEASHG-SKFHRELGSVGNHTEPAKIWKGKKMPGQYGNEKKTVKNLTV 179 Query: 180 VSVDDKRGLILVKGCVPGAK 199 V VD + GL+ + G VPGA+ Sbjct: 180 VKVDAENGLLAIYGAVPGAR 199 >gi|320166925|gb|EFW43824.1| mitochondrial ribosomal protein L3 [Capsaspora owczarzaki ATCC 30864] Length = 566 Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 84/212 (39%), Positives = 128/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R+GV+A K+GM +N G+R+P+TVL + + V+ R + +GY A+Q+ AGE +K Sbjct: 323 QRTGVIATKVGMMHTWNHWGQRLPLTVLQISDAAVLDFRVPESHGYTALQIAAGE--IKQ 380 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +K + G F V ++ +K + EFRV + L+P G+ ++F GQ VDV T G+GF Sbjct: 381 PAKHVEGTFRRVGLTARKHIHEFRVTANA-LIPPGTRLYAAHFIPGQHVDVLANTKGRGF 439 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRH G A+HG S+ HR+ GS G GRV+ K+MAG MG NL V Sbjct: 440 AGVMKRHGMKGSPASHGHSLVHRAMGSFGGGGGMGRVYPGKRMAGHMGTIPAMHHNLLVY 499 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 ++ K L+ VKG VPG +K +++ +RD+ ++ Sbjct: 500 RINTKHNLVYVKGSVPGPRK-AFVYLRDAVRA 530 >gi|212637954|ref|YP_002314474.1| 50S ribosomal protein L3 [Anoxybacillus flavithermus WK1] gi|212559434|gb|ACJ32489.1| Ribosomal protein L3 [Anoxybacillus flavithermus WK1] Length = 208 Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 91/214 (42%), Positives = 124/214 (57%), Gaps = 8/214 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+Q+G + + K +K Sbjct: 3 GILGRKIGMTQVFAENGDLIPVTVIQATPNVVLQKKTIENDGYEAIQLGFEDLREKLANK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G + N +PK+ + E R + VG F G++VDVTG + GKGF G Sbjct: 63 PQKGHAAKANTTPKRFIREIRGVNLAEY-EVGQEVKVDIFNEGEIVDVTGTSKGKGFQGV 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KRH HG S HR GS G P RVFK+K++ GRMGG RVTV+NL+VV VD Sbjct: 122 IKRHGQSRGPMAHG-SRYHRRPGSMGPIA-PNRVFKSKELPGRMGGERVTVQNLKVVKVD 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 +R LIL+KG VPG K I+ KSAV K Sbjct: 180 PERNLILIKGNVPGPNKGLVII-----KSAVKAK 208 >gi|295093643|emb|CBK82734.1| LSU ribosomal protein L3P [Coprococcus sp. ART55/1] Length = 227 Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 90/228 (39%), Positives = 125/228 (54%), Gaps = 19/228 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--- 57 M+ ++A K+GMT +++ G PVTVL C V +T++ +GY A+QVG GE K Sbjct: 1 MKKAILATKVGMTQIFDENGVLTPVTVLQAGPCVVTQIKTVENDGYDAIQVGFGEKKERV 60 Query: 58 -VKNVS------------KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 K+VS K G +PK EFR++ + +G+ F Sbjct: 61 TTKDVSGKKVIRNPHGAGKAEVGHAKKAGTTPKAFYREFRLENTAEY-ELGAEIKADVFA 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G +DVT + GKG++G +KRH + HG S HR GS G PGRVFK KKM Sbjct: 120 AGDKIDVTAKSKGKGYAGGLKRHGLKSGPSGHG-SKYHRHAGSNGSATTPGRVFKGKKMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G MG RVT++NLEVV +D + +ILVKG VPG KK S ++++D+ KS Sbjct: 179 GHMGSVRVTIQNLEVVKIDVENNVILVKGAVPGPKK-SLVMIKDTVKS 225 >gi|297569422|ref|YP_003690766.1| 50S ribosomal protein L3 [Desulfurivibrio alkaliphilus AHT2] gi|296925337|gb|ADH86147.1| 50S ribosomal protein L3 [Desulfurivibrio alkaliphilus AHT2] Length = 210 Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 85/198 (42%), Positives = 118/198 (59%), Gaps = 3/198 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT +++ G IPVTV+ C V+ +TL K GY A+QVG G K + ++K Sbjct: 6 GLLGKKMGMTRIFSETGTAIPVTVIEAGPCVVLQKKTLAKEGYNAIQVGFGAKKEQRLNK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKGFSG 122 P +G + + EFRV D D +G S F VG+LVDV + G+GF G Sbjct: 66 PEKGHAKAAGKGGFYHIKEFRVA-DPDAYELGQEISMTEIFNVGELVDVRARSKGRGFQG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH F G RATHG S+ HR G+ GC P RV K KKM G+MG VT KN +V + Sbjct: 125 VVKRHGFKGGRATHG-SMFHRRPGAIGCSAWPSRVIKGKKMPGQMGDQFVTKKNCTIVDI 183 Query: 183 DDKRGLILVKGCVPGAKK 200 ++ +++VKG VPGAK+ Sbjct: 184 RPEQNVLVVKGGVPGAKE 201 >gi|229823535|ref|ZP_04449604.1| hypothetical protein GCWU000282_00833 [Catonella morbi ATCC 51271] gi|229786979|gb|EEP23093.1| hypothetical protein GCWU000282_00833 [Catonella morbi ATCC 51271] Length = 211 Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 85/212 (40%), Positives = 125/212 (58%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT + G +PVTV+ V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGKKVGMTQFFTENGELVPVTVIEATPNVVLQVKTMENDGYEAVQLGFQDLREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EFR + + VG + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANATPKRFIREFR-EVELGEYQVGQEITVETFAAGDIVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G P RVFK K + G+ GG RVT++NLEVV Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGGASFPSRVFKGKGLPGQTGGERVTIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +VD + +IL+KG VPGAKK S + ++ + K+ Sbjct: 179 AVDVENNVILIKGNVPGAKK-SLVEIKQAIKT 209 >gi|197303812|ref|ZP_03168848.1| hypothetical protein RUMLAC_02551 [Ruminococcus lactaris ATCC 29176] gi|197297105|gb|EDY31669.1| hypothetical protein RUMLAC_02551 [Ruminococcus lactaris ATCC 29176] Length = 242 Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 90/229 (39%), Positives = 126/229 (55%), Gaps = 20/229 (8%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M+ ++A K+GMT ++N E G IPVTVL C V +T++ +GY AVQVG + K K Sbjct: 16 MKKAILATKVGMTQIFNEEDGVLIPVTVLQAGPCVVTQVKTVENDGYSAVQVGYVDKKEK 75 Query: 60 ----------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103 V+K +G F VS K+ + EFR + ++ + F Sbjct: 76 IVTKDNSGKKSIAHRNGVTKAEKGHFDKAGVSGKRYVKEFRFENAEEYT-LAQEIKADIF 134 Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 G +D T ++ GKGF GA+KRH THG S HR GS G DP +VFK KKM Sbjct: 135 AAGDKIDATAISKGKGFQGAIKRHGQSRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKM 193 Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G+MG ++TV+NLEVV VD + L+LVKG VPG KK + ++++ K+ Sbjct: 194 PGQMGNKKITVQNLEVVRVDAENNLLLVKGSVPGPKK-CLVTIKETVKA 241 >gi|282881000|ref|ZP_06289691.1| 50S ribosomal protein L3 [Prevotella timonensis CRIS 5C-B1] gi|281305223|gb|EFA97292.1| 50S ribosomal protein L3 [Prevotella timonensis CRIS 5C-B1] Length = 204 Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 84/195 (43%), Positives = 122/195 (62%), Gaps = 4/195 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V++ +G+ IP TV+ C V +T++K+GY AVQ+G GEAK K SK Sbjct: 3 GLIGRKIGMTSVFSADGKNIPCTVIEAGPCVVTQLKTVEKDGYKAVQLGFGEAKEKRTSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F +PKK L EF+ +++ +L G + F+ VDV G++ GKGF G Sbjct: 63 PLMGTFKKAGTTPKKHLAEFKFEEEYNL---GDTITVDLFSNADFVDVVGVSKGKGFQGV 119 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ ++THG R GS G P +VFK +M G+MGG+RVT +NL V+ V Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLRVLKV 179 Query: 183 DDKRGLILVKGCVPG 197 ++ L++VKG G Sbjct: 180 IPEQNLLIVKGSFAG 194 >gi|126022788|ref|NP_043617.2| ribosomal protein L3 [Odontella sinensis] gi|125987859|sp|P49569|RK3_ODOSI RecName: Full=50S ribosomal protein L3, chloroplastic Length = 207 Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 80/201 (39%), Positives = 115/201 (57%), Gaps = 2/201 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT +++ G IPVT+L + C + +T +GY A+Q+G G K+ Sbjct: 1 MSLGLLGNKIGMTQIFDESGNIIPVTILKVGPCVITQVKTDLNDGYNAIQIGYGTVSNKS 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G N+ P K L EFRV ++ VG V + + GQ +DVTG + GKGF Sbjct: 61 LTQPELGHLQKSNIQPLKYLKEFRVNNPEE-FKVGQVVNVESLSTGQFIDVTGKSSGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRHNF THG S +HR+ GS G PGRV KKMAG++G K L+++ Sbjct: 120 SGLQKRHNFTRGPMTHG-SKNHRAPGSIGMGTTPGRVLPGKKMAGQLGNKVTKTKKLKII 178 Query: 181 SVDDKRGLILVKGCVPGAKKN 201 V+ +++VKG VPG N Sbjct: 179 QVNGNENILVVKGSVPGKPGN 199 >gi|237718743|ref|ZP_04549224.1| 50S ribosomal protein L3 [Bacteroides sp. 2_2_4] gi|229451875|gb|EEO57666.1| 50S ribosomal protein L3 [Bacteroides sp. 2_2_4] Length = 195 Score = 145 bits (365), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 80/197 (40%), Positives = 118/197 (59%), Gaps = 4/197 (2%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V++ +G+ +P TV+ C V +T++K+GY AVQ+G + K K+ +KP+ G F Sbjct: 1 MTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTKPLMGHFKR 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 V+PK+ L EF+ + L +G + F VDV G + GKGF G +KRH FGG Sbjct: 61 AGVTPKRHLAEFKEFGTE--LNLGDTITVEMFNDANFVDVVGTSKGKGFQGVVKRHGFGG 118 Query: 132 L-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190 + +ATHG R GS G P +VFK +M G++GG+RVTV+NL+V+ V L+L Sbjct: 119 VGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKVIADHNLLL 178 Query: 191 VKGCVPGAKKNSWILVR 207 +KG +PG K S +L+ Sbjct: 179 IKGSIPGC-KGSIVLIE 194 >gi|23097574|ref|NP_691040.1| 50S ribosomal protein L3 [Oceanobacillus iheyensis HTE831] gi|42559644|sp|Q8ETY2|RL3_OCEIH RecName: Full=50S ribosomal protein L3 gi|22775797|dbj|BAC12075.1| 50S ribosomal protein L3 [Oceanobacillus iheyensis HTE831] Length = 209 Score = 145 bits (365), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 85/211 (40%), Positives = 124/211 (58%), Gaps = 4/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT +++ G IPVTV+ + V+ +TL+ +GY A+Q+G + K Sbjct: 1 MTKGILGRKIGMTQLFSDNGELIPVTVIQAEPNVVLQKKTLENDGYEALQIGFADKKESR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +K +G +PK+ + E R + + VG F G+ +DVTG + GKGF Sbjct: 61 TNKAEKGHAEKAGTAPKRYVREIR-GAEVNSFEVGQEIKVDIFESGEKIDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH THG S HR+ G+ G DP RVFK KK+ G MG +VT++NLEVV Sbjct: 120 QGVIKRHGQQRGPTTHG-SHFHRAPGAMGVI-DPMRVFKGKKLPGHMGSEQVTIQNLEVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 SVD + L+L+KG VPGAKK S++ + + K Sbjct: 178 SVDTDKNLLLIKGNVPGAKK-SYVKITSAVK 207 >gi|229917358|ref|YP_002886004.1| 50S ribosomal protein L3 [Exiguobacterium sp. AT1b] gi|259646546|sp|C4KZP6|RL3_EXISA RecName: Full=50S ribosomal protein L3 gi|229468787|gb|ACQ70559.1| ribosomal protein L3 [Exiguobacterium sp. AT1b] Length = 208 Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 93/214 (43%), Positives = 129/214 (60%), Gaps = 9/214 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT ++N G +PVTV+ ++ V+ +T+D +GY AVQ+G G+ K Sbjct: 1 MAKGILGTKLGMTQIFNEAGEVVPVTVVAVEGNVVLQLKTVDTDGYEAVQLGFGDIKESR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + E R + +G F G+LVDVTG + GKGF Sbjct: 61 QNKPSKGHAAKANATPKRFIKEVRTSVEG--YEIGQEIKADIFAAGELVDVTGTSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G P RVFK K + G+MGG R T++NLEVV Sbjct: 119 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGQMGGERKTIQNLEVV 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 VD +RGL+LVKG +PGA+K++ I+ KSAV Sbjct: 177 KVDVERGLLLVKGAIPGARKSNVII-----KSAV 205 >gi|149371629|ref|ZP_01891045.1| 50S ribosomal protein L3 [unidentified eubacterium SCB49] gi|149355256|gb|EDM43816.1| 50S ribosomal protein L3 [unidentified eubacterium SCB49] Length = 203 Score = 144 bits (364), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 81/206 (39%), Positives = 122/206 (59%), Gaps = 6/206 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ RK+GMT +++ G+ +P TV+ C V RT + +GY A+Q+G + K V+ Sbjct: 2 SGLIGRKIGMTSIFDENGKNLPCTVIECGPCVVTQVRTEEVDGYAALQLGFDDKKA--VN 59 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G K+K+ EF+ D+ +G + +F G VDV G + GKGF G Sbjct: 60 KAAEGHAKKAGTVAKRKVVEFK--GFDEEYKLGDTITVEHFAEGDFVDVAGTSKGKGFQG 117 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG+ +ATHG R+ GS G P RVFK +MAG+MG +V V+NL V+ Sbjct: 118 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGQMGNEKVKVQNLRVLK 177 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L++VKGCVPG KN+++ ++ Sbjct: 178 VVAEKNLLVVKGCVPG-HKNAYVTIQ 202 >gi|307565148|ref|ZP_07627656.1| 50S ribosomal protein L3 [Prevotella amnii CRIS 21A-A] gi|307346179|gb|EFN91508.1| 50S ribosomal protein L3 [Prevotella amnii CRIS 21A-A] Length = 204 Score = 144 bits (364), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 84/205 (40%), Positives = 127/205 (61%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G GEAK K SK Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F +PKK L EF+ ++ +L G + F + VDV G + GKGF G Sbjct: 63 PLQGHFKKAGTTPKKHLAEFKFDEEYNL---GDTITVELFNDTKYVDVVGTSKGKGFQGV 119 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ ++THG R GS G P +VFK +M G+MGG+RVT +NL+V+ V Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + ++LVKG V G ++ I+ + Sbjct: 180 IPEHNILLVKGSVAGCNGSTVIIEK 204 >gi|319789238|ref|YP_004150871.1| 50S ribosomal protein L3 [Thermovibrio ammonificans HB-1] gi|317113740|gb|ADU96230.1| 50S ribosomal protein L3 [Thermovibrio ammonificans HB-1] Length = 207 Score = 144 bits (364), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 85/206 (41%), Positives = 120/206 (58%), Gaps = 5/206 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--VKNV 61 G++ RK+GMT V+ +G+ I VTV+ C VV +T +++GY A+Q+G E Sbjct: 3 GILGRKVGMTQVFTEDGKAIAVTVIEAGPCTVVQKKTPERDGYSALQLGFIEKNKAESKF 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP+ G F + P + L E + ++ VG + F G+ VDVTG + G+GF+ Sbjct: 63 PKPLLGHFKKAGIKPTRWLKEVKFDNVEEYA-VGDKITVDIFKPGEKVDVTGTSKGRGFA 121 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G KRH FGG R +HG S H GS G DPGRV K K+MAG G VTVKNLE+V Sbjct: 122 GYHKRHGFGGGRRSHG-SDFHEGPGSIGACADPGRVHKGKRMAGHYGNETVTVKNLEIVD 180 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L+L+KG +PG K S ++V+ Sbjct: 181 VIPEKNLLLIKGAIPG-HKGSLVIVK 205 >gi|189501654|ref|YP_001957371.1| 50S ribosomal protein L3 [Candidatus Amoebophilus asiaticus 5a2] gi|226725126|sp|B3EUM3|RL3_AMOA5 RecName: Full=50S ribosomal protein L3 gi|189497095|gb|ACE05642.1| hypothetical protein Aasi_0197 [Candidatus Amoebophilus asiaticus 5a2] Length = 210 Score = 144 bits (364), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 78/208 (37%), Positives = 121/208 (58%), Gaps = 5/208 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT +Y+ GR +P TV+ C V + ++K+GY AVQ+G + K KN K Sbjct: 3 GIIGKKLGMTTLYDEAGRSVPCTVITGGPCVVTQIKNIEKDGYTAVQLGYDDKKEKNTVK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRV--QKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKGF 120 P+ G F +PK+KL EF+ ++ + +G F G+ VD G++ GKGF Sbjct: 63 PLMGHFQKAQTTPKRKLVEFKEFGKELGKEIQLGQTIQLHDIFVEGEYVDAIGLSKGKGF 122 Query: 121 SGAMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 G +KRH F G+ +HG R+ G+ G P RVFK +MAGR GG RV + NL + Sbjct: 123 QGVVKRHGFSGVGGKSHGQHNRERAPGAIGACSTPSRVFKGMRMAGRTGGQRVKITNLRI 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVR 207 + + ++ ++++ G VPGA KN +I++ Sbjct: 183 MKLVPEKNILVISGSVPGA-KNGYIILE 209 >gi|269101057|ref|YP_003289205.1| 50S ribosomal protein L3 [Ectocarpus siliculosus] gi|266631565|emb|CAV31236.1| Chloroplast 50S ribosomal protein L3 [Ectocarpus siliculosus] gi|270118695|emb|CAT18766.1| Chloroplast 50S ribosomal protein L3 [Ectocarpus siliculosus] Length = 207 Score = 144 bits (364), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 81/201 (40%), Positives = 114/201 (56%), Gaps = 2/201 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+ K+GMT +++ G +PVTV+ + C + +T NGY A+Q+G + Sbjct: 1 MSIGIFGNKIGMTQIFDKNGLALPVTVVSVGPCFITQLKTEKTNGYDAIQIGYSKGHTSK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK G +SP L E+RV D +G + + F VGQ V+VTG +IGKGF Sbjct: 61 FSKAELGHLEKNGLSPLYHLCEYRVN-DLKNYSLGQILTVDNFQVGQFVNVTGKSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRH F THG S +HR+ GS G PGRVF K MAG++G ++TV LE++ Sbjct: 120 SGNQKRHKFKRGPMTHG-SKNHRAPGSIGPGTTPGRVFPGKLMAGQLGAKKITVSKLEIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKN 201 +D K+ L+++KG VPG N Sbjct: 179 GIDSKQNLLILKGSVPGKPGN 199 >gi|303328094|ref|ZP_07358533.1| 50S ribosomal protein L3 [Desulfovibrio sp. 3_1_syn3] gi|302861920|gb|EFL84855.1| 50S ribosomal protein L3 [Desulfovibrio sp. 3_1_syn3] Length = 209 Score = 144 bits (364), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 83/206 (40%), Positives = 117/206 (56%), Gaps = 2/206 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 + G++ RKLGMT ++ +G + VTV+ C V +T++K+GY A+Q+ EAK K+V Sbjct: 4 KMGILGRKLGMTRIFAGDGAAVAVTVIEAGPCPVTQVKTVEKDGYNALQIALTEAKEKHV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 K MRG F+ + E R+ + P G + F G +V VTG ++GKG+ Sbjct: 64 GKAMRGHFAKAGTGLFRHTREIRLSGAPEQQP-GQQLTVDIFAAGDVVKVTGKSMGKGYQ 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G M+R NF G + THG HR++GS G PG VFK +KMAG G VT L +V Sbjct: 123 GRMRRWNFAGSKDTHGCEKVHRNNGSVGNNTFPGHVFKGRKMAGHWGNETVTEMGLLIVG 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V + +ILVKG VPG KN +L+R Sbjct: 183 VRPEDNVILVKGSVPGP-KNGLVLIR 207 >gi|89100349|ref|ZP_01173214.1| 50S ribosomal protein L3 [Bacillus sp. NRRL B-14911] gi|89084970|gb|EAR64106.1| 50S ribosomal protein L3 [Bacillus sp. NRRL B-14911] Length = 208 Score = 144 bits (363), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 85/200 (42%), Positives = 121/200 (60%), Gaps = 3/200 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +++D +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVVEATGNVVLQVKSVDTDGYEAIQLGFEDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + + +PK+ + EFR D VG F G VDVTG++ GKGF Sbjct: 61 SNKPEQGHVAKADTAPKRFVREFR-GVDLAAYEVGQEVKVDIFAEGDTVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G++KRH +HG S HR GS G P RVFK K + GRMGG+++TV+NLE+V Sbjct: 120 QGSIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKALPGRMGGDQITVQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKK 200 +D +R L+L+KG VPGAKK Sbjct: 178 KIDAERNLLLIKGNVPGAKK 197 >gi|139438580|ref|ZP_01772096.1| Hypothetical protein COLAER_01094 [Collinsella aerofaciens ATCC 25986] gi|133776119|gb|EBA39939.1| Hypothetical protein COLAER_01094 [Collinsella aerofaciens ATCC 25986] Length = 203 Score = 144 bits (363), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 93/205 (45%), Positives = 122/205 (59%), Gaps = 7/205 (3%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RK+GMT V++ + +PVTV+ C V +T +GY AVQ+G G+ K KNV+KP Sbjct: 2 ILGRKIGMTQVWDEDDNVVPVTVIQAGPCAVSQVKTQATDGYDAVQIGFGDIKAKNVNKP 61 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M G F+ V P + L E RV+ ++ VG V + + F + VDV G + GKGF G + Sbjct: 62 MAGHFAKAGVEPVRFLREVRVENGEE-HKVGEVVTVADFADVEKVDVIGTSKGKGFQGRI 120 Query: 125 KRHNFGGLRA--THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 KR +G R THG S R GS G P RV K KMAG MG RVTVKNL VV + Sbjct: 121 KR--WGQRRGPMTHG-SHFQRHPGSIGQCAYPARVLKGVKMAGHMGNERVTVKNLSVVRI 177 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 D ++ LILVKG VPGA KN + +R Sbjct: 178 DAEQNLILVKGAVPGA-KNGLVAIR 201 >gi|282858374|ref|ZP_06267554.1| 50S ribosomal protein L3 [Prevotella bivia JCVIHMP010] gi|282588822|gb|EFB93947.1| 50S ribosomal protein L3 [Prevotella bivia JCVIHMP010] Length = 204 Score = 144 bits (363), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 84/205 (40%), Positives = 126/205 (61%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G GEAK K SK Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G F +PKK L EF+ ++ +L G + F + VDV G + GKGF G Sbjct: 63 PQQGHFKKAGTTPKKHLAEFKFDEEYNL---GDTITVELFNDTKFVDVVGTSKGKGFQGV 119 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ ++THG R GS G P +VFK +M G+MGG+RVT +NL+V+ V Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + ++LVKG V G ++ I+ + Sbjct: 180 IPEHNILLVKGSVAGCNGSTVIIEK 204 >gi|290968244|ref|ZP_06559787.1| 50S ribosomal protein L3 [Megasphaera genomosp. type_1 str. 28L] gi|290781726|gb|EFD94311.1| 50S ribosomal protein L3 [Megasphaera genomosp. type_1 str. 28L] Length = 212 Score = 144 bits (363), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 92/213 (43%), Positives = 128/213 (60%), Gaps = 5/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ +KLGMT ++ EG +PVTV+ VV +T+D +GY ++Q+G GE K K+ Sbjct: 1 MSKAILGKKLGMTQIFTEEGAVVPVTVVEASPNVVVRVKTVDTDGYNSIQIGYGEVKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP++G F+ V+P K L E R+ D VG + F G LVDV G GKGF Sbjct: 61 LTKPVKGQFAKAGVNPVKYLRELRLT-DTPEYTVGQTLAADIFASGDLVDVIGTGKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTG--CRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KRH F HG S SHR GS G G+V K KK+ G+MGGN+ TV +L Sbjct: 120 AGTIKRHGFHRGPMGHG-SKSHREPGSLGPMISGGGGKVVKGKKLPGQMGGNQATVLHLS 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VV VD + LIL+KG +PGA K S +++RD+ K Sbjct: 179 VVKVDMDKNLILIKGGIPGA-KGSLVMIRDTVK 210 >gi|301059231|ref|ZP_07200168.1| 50S ribosomal protein L3 [delta proteobacterium NaphS2] gi|300446666|gb|EFK10494.1| 50S ribosomal protein L3 [delta proteobacterium NaphS2] Length = 207 Score = 144 bits (363), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 85/209 (40%), Positives = 117/209 (55%), Gaps = 2/209 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M + + +K+GMT + G+ PVTV+ + C V +T++K GY A+Q+G G K Sbjct: 1 MVNKLFGKKIGMTRYFLEGGKSEPVTVVKIAPCVVTQKKTVEKEGYNAIQIGFGPKDEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP++G F + L E +V D D +G F +G V V G + G+GF Sbjct: 61 TNKPLKGHFEASGGKCFAYLNEVKVD-DVDAFELGQEIKSDVFAIGDTVHVRGRSKGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR FGG R THG S SHR GS GC DP RV K +KM GRMG VT KNL+VV Sbjct: 120 AGVMKRWGFGGGRKTHG-SRSHRVPGSIGCSADPARVVKGRKMPGRMGNTHVTTKNLKVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 + ++L+KG VPGA+ N + + S Sbjct: 179 DIRPDMDILLLKGPVPGARGNLLEIFKAS 207 >gi|308233852|ref|ZP_07664589.1| LSU ribosomal protein L3P [Atopobium vaginae DSM 15829] gi|328943560|ref|ZP_08241025.1| 50S ribosomal protein L3 [Atopobium vaginae DSM 15829] gi|327491529|gb|EGF23303.1| 50S ribosomal protein L3 [Atopobium vaginae DSM 15829] Length = 206 Score = 144 bits (363), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 88/207 (42%), Positives = 121/207 (58%), Gaps = 3/207 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M + ++ RK+GMT V++ +PVTV+ C V +T +GY AVQ+G G+ K K+ Sbjct: 1 MVTTILGRKIGMTQVWDENDNIVPVTVIQAGPCTVSQVKTKATDGYDAVQIGFGDIKAKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP+ G F + NV P + L E RV+ +D G V + F VDV G + GKGF Sbjct: 61 VNKPLAGHFKAHNVEPARYLAEVRVENGED-HKCGDVVTVKDFADVAAVDVIGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF HG S + R GS G P RV K MAG MG RVTVKNL++V Sbjct: 120 QGTIKRWNFSCGPKAHG-SRNQREPGSIGQCSYPARVRKGLHMAGHMGDERVTVKNLKLV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207 +D+++ L+LVKG VPG KN+ + +R Sbjct: 179 RIDEEQNLMLVKGAVPGG-KNALVSIR 204 >gi|113476579|ref|YP_722640.1| 50S ribosomal protein L3 [Trichodesmium erythraeum IMS101] gi|123056500|sp|Q110A7|RL3_TRIEI RecName: Full=50S ribosomal protein L3 gi|110167627|gb|ABG52167.1| LSU ribosomal protein L3P [Trichodesmium erythraeum IMS101] Length = 227 Score = 144 bits (363), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 117/212 (55%), Gaps = 17/212 (8%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT V+ E G+ IPVTV+ C V +T +GY AVQ+G GEAK K Sbjct: 1 MVVGILGTKLGMTQVFEAETGKAIPVTVVEAGPCVVTQIKTEQTDGYTAVQIGYGEAKNK 60 Query: 60 ----NVSKP----------MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105 N +P G +P + L E+RV + +G F Sbjct: 61 TRQLNTKEPKEVNRYLTNAQEGHLVKSGGTPLRYLREYRVDNTGNF-ELGQQIKVDLFEA 119 Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165 GQLVDVTG +IGKGF+G KRHNF HG S +HR GSTG PGRV+ KKMAG Sbjct: 120 GQLVDVTGKSIGKGFAGYQKRHNFRRGPMAHG-SKNHRLPGSTGPGTTPGRVYPGKKMAG 178 Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197 +G RVT + L++V +D +R L+L+KG +PG Sbjct: 179 HLGNVRVTTRKLKIVRIDPERNLLLIKGSIPG 210 >gi|11467343|ref|NP_043200.1| ribosomal protein L3 [Cyanophora paradoxa] gi|132953|sp|P15766|RK3_CYAPA RecName: Full=50S ribosomal protein L3, cyanelle gi|1016144|gb|AAA81231.1| ribosomal protein L3 [Cyanophora paradoxa] gi|13513069|emb|CAC35457.1| L3 ribosomal protein [Cyanophora paradoxa] Length = 209 Score = 144 bits (363), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 77/197 (39%), Positives = 114/197 (57%), Gaps = 2/197 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT +++ G IPVT++ C + +T +GY A+QVG E K KN Sbjct: 1 MSIGILGTKLGMTQIFDEAGNAIPVTIIQAGPCPITQIKTTATDGYNAIQVGYRETKEKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++K G N S + L EF ++ D + V + F +V++ G +IG+GF Sbjct: 61 LTKAQLGHLQKTNNSALRVLQEFSIESSDS-IEVEKPITVELFNDNDIVNIQGYSIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRHNF +HG S +HR GS G PGRV+ +MAGR G +++T++ L++V Sbjct: 120 SGYQKRHNFARGPMSHG-SKNHRLPGSIGAGSTPGRVYPGTRMAGRKGDSKITIRGLKIV 178 Query: 181 SVDDKRGLILVKGCVPG 197 VD +R L++VKG VPG Sbjct: 179 KVDSERSLLIVKGSVPG 195 >gi|320160414|ref|YP_004173638.1| 50S ribosomal protein L3 [Anaerolinea thermophila UNI-1] gi|319994267|dbj|BAJ63038.1| 50S ribosomal protein L3 [Anaerolinea thermophila UNI-1] Length = 209 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 86/212 (40%), Positives = 123/212 (58%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT +++ G IPVTV+ C V RT + +GY AVQ+G E K K Sbjct: 1 MLKGLIGKKIGMTQIFDENGVAIPVTVIEAGPCYVTQVRTPENDGYSAVQLGFEEVKPKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++ G N+ P + L EFRV+ + + G + F VG+ VDV G + GKGF Sbjct: 61 LTGGELGHLKRNNLPPLRFLREFRVKNPE--VKEGDKVTVECFAVGERVDVVGTSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR++F G THG S HR+ GS PGRV+K + G MG +RVT + L+VV Sbjct: 119 QGGVKRYHFRGGPKTHGQSDRHRAPGSRSSGTTPGRVYKGSRGPGHMGNDRVTAQGLKVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R LI VKG VPGA K ++++++ K Sbjct: 179 LVDTERNLIGVKGSVPGA-KGGLVVIKEARKQ 209 >gi|302336382|ref|YP_003801589.1| LSU ribosomal protein L3P [Olsenella uli DSM 7084] gi|301320222|gb|ADK68709.1| LSU ribosomal protein L3P [Olsenella uli DSM 7084] Length = 206 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 91/207 (43%), Positives = 122/207 (58%), Gaps = 3/207 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M S ++ RK+GMT V++ + +PVTV+ C V +T +GY AVQ+G G+ K+ Sbjct: 1 MVSTILGRKIGMTQVWDEDDNVVPVTVIQAGPCTVSQVKTKATDGYDAVQIGFGDITAKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM G F+ V P + L E RV+ D + G S + F + VDVTG + GKGF Sbjct: 61 VNKPMAGHFAKAGVEPMRYLREVRVE-DGEEHSCGDQVSVADFAEVKSVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF THG S + R GS G P RV K MAG MG RVTVKNL++V Sbjct: 120 QGTIKRWNFSRGPMTHG-SRNQRKPGSIGQCAYPARVRKGLHMAGHMGDERVTVKNLKLV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207 VD ++ L+LVKG VPG KN+ + +R Sbjct: 179 RVDVEQNLMLVKGAVPGG-KNALVSIR 204 >gi|332182016|gb|AEE17704.1| 50S ribosomal protein L3 [Treponema brennaborense DSM 12168] Length = 206 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 92/211 (43%), Positives = 123/211 (58%), Gaps = 9/211 (4%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++A K+GMT V++ +G PVTV+ +D VV +T + GY AV +G G+ K +SK Sbjct: 3 GLIATKVGMTQVFDEDGNLTPVTVIRVDPNVVVACKTKETFGYDAVVLGLGDLKNSQISK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F ++PK+ L EFR ++ + VG F VDVT + GKGF G Sbjct: 63 PYAGQFPE-GITPKRHLKEFRDFSNE--VAVGDQIGVELFENTNYVDVTATSKGKGFQGV 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR F G RATHG S HR GSTG PG FKN KM G MG R+TV+NL+V+ VD Sbjct: 120 MKRWGFHGGRATHG-SKFHREAGSTGQCTSPGHSFKNIKMPGHMGCERITVQNLKVIKVD 178 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 + +++V+G VPG K + I+ KSAV Sbjct: 179 PELKVVMVRGSVPGNKDCTLII-----KSAV 204 >gi|42561270|ref|NP_975721.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|81829359|sp|Q6MSM6|RL3_MYCMS RecName: Full=50S ribosomal protein L3 gi|42492768|emb|CAE77363.1| 50S RIBOSOMAL PROTEIN L3 [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320560|gb|ADK69203.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 223 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 82/209 (39%), Positives = 131/209 (62%), Gaps = 8/209 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+ MT V+ G+ +PVTV+ + V+ +T+D +GY+AVQ+G + +V V+K Sbjct: 3 GILGRKVEMTQVFTSAGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLVNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSG 122 P G F N +PK+ + E R + +L G V + S F G+ VDVTG++ GKGF+G Sbjct: 63 PELGHFKKANSNPKRFVKEIRNMQGYEL---GQVINVSDIFVSGEYVDVTGISKGKGFAG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHN+ HG S HR GS G + R+FK+KKM G MG + T++NLE++++ Sbjct: 120 GIKRHNYARGPMAHG-SGYHRGIGSMGAIIN--RIFKSKKMPGHMGNAKRTIQNLEIIAI 176 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D ++L+KG +PG+ KNS++ ++ + K Sbjct: 177 DQPNNIMLIKGSIPGS-KNSFVQIKQNIK 204 >gi|46579714|ref|YP_010522.1| 50S ribosomal protein L3 [Desulfovibrio vulgaris str. Hildenborough] gi|120602809|ref|YP_967209.1| 50S ribosomal protein L3 [Desulfovibrio vulgaris DP4] gi|81830454|sp|Q72CI0|RL3_DESVH RecName: Full=50S ribosomal protein L3 gi|166233138|sp|A1VEB6|RL3_DESVV RecName: Full=50S ribosomal protein L3 gi|46449129|gb|AAS95781.1| ribosomal protein L3 [Desulfovibrio vulgaris str. Hildenborough] gi|120563038|gb|ABM28782.1| LSU ribosomal protein L3P [Desulfovibrio vulgaris DP4] gi|311233505|gb|ADP86359.1| 50S ribosomal protein L3 [Desulfovibrio vulgaris RCH1] Length = 209 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 85/206 (41%), Positives = 117/206 (56%), Gaps = 2/206 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 + G++ RK+G+T ++ +G + VTV+ C V +T+ +GY A+Q+ EAK K++ Sbjct: 4 KMGILGRKIGVTRIFASDGSAVAVTVIKAGPCPVTQVKTVATDGYDAIQIAFDEAKEKHL 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G + + L E R++ VGS + F G V V+G +IGKG+ Sbjct: 64 NKPEIGHLAKAGKGLFRTLREIRLEAPA-AYEVGSELDVTLFATGDRVKVSGTSIGKGYQ 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G M+R NF G + THG HRS GS G PG VFK KKMAG G VTV NLEVV Sbjct: 123 GVMRRWNFAGSKDTHGCEKVHRSGGSIGNNTFPGHVFKGKKMAGHWGNESVTVLNLEVVD 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V + +ILVKG VPG KN ++VR Sbjct: 183 VRPEDNVILVKGSVPGP-KNGLVMVR 207 >gi|325856043|ref|ZP_08171932.1| 50S ribosomal protein L3 [Prevotella denticola CRIS 18C-A] gi|327313190|ref|YP_004328627.1| 50S ribosomal protein L3 [Prevotella denticola F0289] gi|325483715|gb|EGC86679.1| 50S ribosomal protein L3 [Prevotella denticola CRIS 18C-A] gi|326944923|gb|AEA20808.1| 50S ribosomal protein L3 [Prevotella denticola F0289] Length = 204 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 85/205 (41%), Positives = 125/205 (60%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G GEAK K SK Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKTVEKDGYKAVQLGFGEAKEKRTSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F +PKK L EF+ ++ +L G + F + VDV G + GKGF G Sbjct: 63 PQLGHFKKAGTTPKKHLAEFKFDEEYNL---GDTITVELFNDTKFVDVVGTSKGKGFQGV 119 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ ++THG R GS G P +VFK +M G+MGG+RVT +NL+V+ V Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + L+LVKG V G ++ I+ + Sbjct: 180 IPEHNLLLVKGSVAGCNGSTVIISK 204 >gi|121603120|ref|YP_980449.1| 50S ribosomal protein L3 [Polaromonas naphthalenivorans CJ2] gi|166233174|sp|A1VIQ0|RL3_POLNA RecName: Full=50S ribosomal protein L3 gi|120592089|gb|ABM35528.1| LSU ribosomal protein L3P [Polaromonas naphthalenivorans CJ2] Length = 226 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 87/211 (41%), Positives = 125/211 (59%), Gaps = 3/211 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G +PVTV+ + N +V +T +GY A+QV G K V+K Sbjct: 8 GLLGRKVGMMRLFTDDGDTVPVTVVDVSNNRVTQVKTEANDGYDALQVAFGSRKASRVTK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVF-SPSYFTVGQLVDVTGMTIGKGFS 121 P G + V + L EFRV D G+V + F VGQLVDV G +IGKGF+ Sbjct: 68 PEAGHLAKAGVEAGEILKEFRVTADVAGKYAAGTVVPAADIFAVGQLVDVQGTSIGKGFA 127 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRH RA+HG S SH GS G QDPGRVF K+M G +G T +NL++V Sbjct: 128 GTIKRHKMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTKTTQNLDIVR 187 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D+ R L++++G VPG+ K ++ VR + K+ Sbjct: 188 IDEARQLLMIRGAVPGS-KGGFVTVRAAIKA 217 >gi|205372069|ref|ZP_03224886.1| 50S ribosomal protein L3 [Bacillus coahuilensis m4-4] Length = 209 Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 90/212 (42%), Positives = 124/212 (58%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T D +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTADTDGYSAIQLGFEDMRAKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G + +PK+ + E R + VG F G +VDVTG++ GKGF Sbjct: 61 ANKPRTGHAAKAETAPKRFIREIR-DANVAEYEVGQEVKVDTFAAGDVVDVTGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH +HG S HR GS G P RVFK K + GRMGG+ VTV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGDIVTVQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGAKK + + V+ + K+ Sbjct: 178 KVDVERNLLLVKGNVPGAKK-ALVKVQSAVKA 208 >gi|286142754|gb|ADC41407.1| ribosomal protein L3 [Streptomyces sp. CB169] gi|286142756|gb|ADC41408.1| ribosomal protein L3 [Streptomyces sp. CB170] Length = 167 Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 77/167 (46%), Positives = 101/167 (60%), Gaps = 1/167 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNFGGL Sbjct: 61 DVTPRRHLVEIRTS-DASEYTLGQELTAETFESGVKVDVTGKSKGKGFAGVMKRHNFGGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++HG HRS GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 GSSHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTV 166 >gi|256827416|ref|YP_003151375.1| 50S ribosomal protein L3P [Cryptobacterium curtum DSM 15641] gi|256583559|gb|ACU94693.1| LSU ribosomal protein L3P [Cryptobacterium curtum DSM 15641] Length = 206 Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 85/207 (41%), Positives = 122/207 (58%), Gaps = 3/207 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M + + KLGMT +++ + +PVTV+ + +T + +GY AVQ+G G K + Sbjct: 1 MINAIYGTKLGMTQIFSEDDEVVPVTVIQAAPNTICQLKTKETDGYEAVQLGFGAIKPQK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++PM G F+ V P + L E RV+ D +G + S F + VDVT + GKGF Sbjct: 61 VNRPMGGHFAKQGVDPVRHLREVRVE-DASAHSLGEKVTVSLFADAKKVDVTATSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G M+R+NF G HG HR+ GS G P RVFK ++ G MG + VTVKNL+VV Sbjct: 120 AGVMRRYNFRGGPGGHGAHF-HRAPGSVGMCATPSRVFKGLRLPGHMGVDTVTVKNLDVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207 +D+++ LILVKG VPG KN+ + VR Sbjct: 179 RIDEEQNLILVKGAVPGG-KNAMVRVR 204 >gi|254442313|ref|ZP_05055789.1| ribosomal protein L3 [Verrucomicrobiae bacterium DG1235] gi|198256621|gb|EDY80929.1| ribosomal protein L3 [Verrucomicrobiae bacterium DG1235] Length = 201 Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 87/202 (43%), Positives = 121/202 (59%), Gaps = 4/202 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT VY + + +PVTVL C V+ +T++ +GY A+Q+G K KN SK G Sbjct: 1 MTQVYGSDNQVVPVTVLQAGPCPVLQVKTVESDGYNAIQIGFDSKKDKNASKAAIGHAKK 60 Query: 72 VNVSPKKKLF-EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130 V+ ++ E R + D G V S F VG+ VDV G T GKGF+G MKR N Sbjct: 61 AGVAHAPRVIREVRSPEAIDAT-AGDVLDVSKFEVGKKVDVIGNTKGKGFAGVMKRFNTK 119 Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190 G A+HG S+ HR GS G Q PG VFKN+KM G MG + T++NLE+VS+D ++ LIL Sbjct: 120 GGPASHG-SMFHRRIGSIGLCQWPGHVFKNQKMPGHMGAKQRTIQNLEIVSIDAEKNLIL 178 Query: 191 VKGCVPGAKKNSWILVRDSFKS 212 VKG +PGA ++ +++R + K+ Sbjct: 179 VKGGIPGANGDT-VMIRSAIKA 199 >gi|258648159|ref|ZP_05735628.1| 50S ribosomal protein L3 [Prevotella tannerae ATCC 51259] gi|260852040|gb|EEX71909.1| 50S ribosomal protein L3 [Prevotella tannerae ATCC 51259] Length = 206 Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 82/209 (39%), Positives = 121/209 (57%), Gaps = 10/209 (4%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ IP TV+ + C V ++++K GY AVQ+G EAK KN + Sbjct: 3 GLLGKKIGMTSVFSADGKNIPCTVVEVGPCVVTQIKSVEKEGYNAVQLGFQEAKEKNTTA 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD----DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 P+ G F +PK+ L EF + D + V VF + VDV G + G G Sbjct: 63 PLLGHFKKAGTTPKRHLAEFTGFDKEFNLGDTITVADVFEGVEY-----VDVVGTSKGHG 117 Query: 120 FSGAMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 F G MKRH FGG+ ++THG R G+ G P +VFK +MAG+MG R T +NL+ Sbjct: 118 FQGVMKRHGFGGVGQSTHGQDDRARKPGAIGACSYPAKVFKGMRMAGQMGNRRATNQNLK 177 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVR 207 V+ V + L+L+KG VPG K + I+ + Sbjct: 178 VIKVIPEHNLLLLKGSVPGCKGSIVIIEK 206 >gi|323308966|gb|EGA62197.1| Mrpl9p [Saccharomyces cerevisiae FostersO] Length = 235 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 77/175 (44%), Positives = 106/175 (60%), Gaps = 2/175 (1%) Query: 2 RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R G++ RK GM ++ G R T+L ++N +V++HRT + NGY A QVG G + Sbjct: 58 RCGLITRKKGMMPYFDKSTGERSAATILEVNNVEVIMHRTSEVNGYFACQVGYGSRHLSK 117 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF-TVGQLVDVTGMTIGKG 119 VS+ M G F+S V+PK+ + EFRV+ + + + +F GQ VDV ++ GKG Sbjct: 118 VSRQMLGHFASKVVNPKEHVAEFRVKDEKGINTTWHIIETVFFFKEGQYVDVRSVSKGKG 177 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 F+G MKR+ F GLRA+HG SI HR GS G QDPGRV +KM G MG VT+ Sbjct: 178 FTGVMKRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTI 232 >gi|317496190|ref|ZP_07954550.1| 50S ribosomal protein L3 [Gemella moribillum M424] gi|329770040|ref|ZP_08261435.1| 50S ribosomal protein L3 [Gemella sanguinis M325] gi|316913765|gb|EFV35251.1| 50S ribosomal protein L3 [Gemella moribillum M424] gi|328837351|gb|EGF86981.1| 50S ribosomal protein L3 [Gemella sanguinis M325] Length = 220 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 93/224 (41%), Positives = 127/224 (56%), Gaps = 18/224 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--- 57 M G++ RK+GMT ++ G IPVTV+ V+ +T + GY A+Q+G + + Sbjct: 1 MTKGILGRKVGMTQIFAENGELIPVTVVEAKGNVVLQKKTEEVEGYNAIQLGFDDKRPYD 60 Query: 58 -------VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQL 108 VK +KP +G N +PK+ + E R D D+ VG F G L Sbjct: 61 KERKDRLVKVANKPEQGHADKANTAPKRFVREIR---DADVASYEVGQEVQVDIFAAGDL 117 Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168 VDVTG++ GKGF GA+KRH HG S HR GS G P RVFK K + G+MG Sbjct: 118 VDVTGVSKGKGFQGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKALPGQMG 175 Query: 169 GNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G VT +NLE+VSVD + GLILVKGC+PG+KK S++ ++ + KS Sbjct: 176 GVTVTTQNLEIVSVDVENGLILVKGCIPGSKK-SFVKIQSAVKS 218 >gi|256383913|gb|ACU78483.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. capri str. GM12] gi|256384744|gb|ACU79313.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. capri str. GM12] gi|296455991|gb|ADH22226.1| 50S ribosomal protein L3 [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 223 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 82/209 (39%), Positives = 130/209 (62%), Gaps = 8/209 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+ MT V+ G+ +PVTV+ + V+ +T+D +GY+AVQ+G + +V V+K Sbjct: 3 GILGRKVEMTQVFTSAGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLVNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSG 122 P G F N +PK+ + E R + +L G V + S F G+ VDVTG++ GKGF+G Sbjct: 63 PELGHFKKANSNPKRFVKEIRNMQGYEL---GQVINVSDIFVSGEYVDVTGISKGKGFAG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHN+ HG S HR GS G + R+FK+KKM G MG + T++NLE++++ Sbjct: 120 GIKRHNYARGPMAHG-SGYHRGIGSMGAIIN--RIFKSKKMPGHMGNAKRTIQNLEIIAI 176 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D ++L+KG +PG KNS++ ++ + K Sbjct: 177 DQPNNIMLIKGSIPGP-KNSFVQIKQNIK 204 >gi|224477220|ref|YP_002634826.1| 50S ribosomal protein L3 [Staphylococcus carnosus subsp. carnosus TM300] gi|254803691|sp|B9DM19|RL3_STACT RecName: Full=50S ribosomal protein L3 gi|222421827|emb|CAL28641.1| 50S ribosomal protein L3 [Staphylococcus carnosus subsp. carnosus TM300] Length = 220 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 89/219 (40%), Positives = 121/219 (55%), Gaps = 11/219 (5%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG + + Sbjct: 1 MTKGILGRKIGMTQVFGENGDLIPVTVVEAGQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60 Query: 59 ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 K +KP G +PK+ + EF+ + D VG S F G ++DVT Sbjct: 61 KDSKSNKYANKPAEGHAKKAGTAPKRFIREFK-NINVDEYEVGQEVSVDTFEAGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF G +KRH HG S HR+ GS G D +VFK KM GRMGGN V Sbjct: 120 GVSKGKGFQGNIKRHGHARGPMAHG-SHFHRAPGSVGMASDASKVFKGHKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 TV+NLEVV +D + +ILVKG VPG KK + ++ S K Sbjct: 179 TVQNLEVVQIDAENNVILVKGNVPGPKK-GLVEIKTSIK 216 >gi|221488825|gb|EEE27039.1| 50S ribosomal protein L3, putative [Toxoplasma gondii GT1] Length = 514 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 84/199 (42%), Positives = 117/199 (58%), Gaps = 3/199 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K+GM +++ G R VTV +D C V+ RTLDK+GY A +G G + V Sbjct: 256 RTGLLAYKIGMMSLWDGWGERHAVTVCQVDRCVVMDQRTLDKDGYEACVMGIGYKPIHKV 315 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KPM G + + PK ++ EF+ D LLPVG S +FT GQ V V+G + KG+ Sbjct: 316 TKPMLGVYIRSQIEPKSRIAEFKCS-SDCLLPVGHEMSVRHFTPGQQVFVSGWSKDKGYL 374 Query: 122 GAMKRHNFGGLRATHGVSI-SHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G KR F G A+HGV +H S GS G + V++ KKMAG GG+ V N +V Sbjct: 375 GVKKRWGFAGQNASHGVEAKAHSSPGSIGQSKTVNVVWRFKKMAGHAGGDPRVV-NCKVF 433 Query: 181 SVDDKRGLILVKGCVPGAK 199 ++ +R LI +KGCVPG K Sbjct: 434 RIEAQRNLIFLKGCVPGYK 452 >gi|256830538|ref|YP_003159266.1| ribosomal protein L3 [Desulfomicrobium baculatum DSM 4028] gi|256579714|gb|ACU90850.1| ribosomal protein L3 [Desulfomicrobium baculatum DSM 4028] Length = 210 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 79/202 (39%), Positives = 115/202 (56%), Gaps = 1/202 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT +Y +G IPVTV+ C V+ + +K+GY A+QVG E ++K Sbjct: 6 GIVGRKIGMTRIYGADGNVIPVTVIQAGPCPVIEKKVSEKDGYTAIQVGFEEVAAHRLTK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G N K L E R+ D+ +G + FT G+ + VTG + G+GF+G Sbjct: 66 PEQGHQQKANCGFYKMLKEIRLGSVDEY-EIGQKLTVEMFTPGEKIRVTGTSKGRGFAGV 124 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 ++R NF G A+HG HR GS G P +VFK KKM G++G T+ NLE+V V Sbjct: 125 IRRWNFSGAPASHGHEKVHRKPGSIGQCAWPSKVFKGKKMPGQLGNKTATMLNLEIVDVR 184 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 + ++LV+G VPG K+ +L Sbjct: 185 PEDNVVLVRGQVPGPKQGIVVL 206 >gi|331703716|ref|YP_004400403.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328802271|emb|CBW54425.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 223 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 82/209 (39%), Positives = 130/209 (62%), Gaps = 8/209 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+ MT V+ G+ +PVTV+ + V+ +T+D +GY+AVQ+G + +V V+K Sbjct: 3 GILGRKVEMTQVFTNSGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLVNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSG 122 P G F N +PK+ + E R + +L G V + S F G+ VDVTG++ GKGF+G Sbjct: 63 PELGHFKKANSNPKRFVKEIRNMQGYEL---GQVINVSDIFVSGEYVDVTGISKGKGFAG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHN+ HG S HR GS G + R+FK+KKM G MG + T++NLE++++ Sbjct: 120 GIKRHNYARGPMAHG-SGYHRGIGSMGAIIN--RIFKSKKMPGHMGNAKRTIQNLEIIAI 176 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D ++L+KG +PG KNS++ ++ + K Sbjct: 177 DQPNNIMLIKGSIPGP-KNSFVQIKQNIK 204 >gi|237837257|ref|XP_002367926.1| ribosomal protein L3p, putative [Toxoplasma gondii ME49] gi|211965590|gb|EEB00786.1| ribosomal protein L3p, putative [Toxoplasma gondii ME49] gi|221509315|gb|EEE34884.1| 50S ribosomal protein L3, putative [Toxoplasma gondii VEG] Length = 514 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 84/199 (42%), Positives = 117/199 (58%), Gaps = 3/199 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K+GM +++ G R VTV +D C V+ RTLDK+GY A +G G + V Sbjct: 256 RTGLLAYKIGMMSLWDGWGERHAVTVCQVDRCVVMDQRTLDKDGYEACVMGIGYKPIHKV 315 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KPM G + + PK ++ EF+ D LLPVG S +FT GQ V V+G + KG+ Sbjct: 316 TKPMLGVYIRSQIEPKSRIAEFKCS-SDCLLPVGHEMSVRHFTPGQQVFVSGWSKDKGYL 374 Query: 122 GAMKRHNFGGLRATHGVSI-SHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G KR F G A+HGV +H S GS G + V++ KKMAG GG+ V N +V Sbjct: 375 GVKKRWGFAGQNASHGVEAKAHSSPGSIGQSKTVNVVWRFKKMAGHAGGDPRVV-NCKVF 433 Query: 181 SVDDKRGLILVKGCVPGAK 199 ++ +R LI +KGCVPG K Sbjct: 434 RIEAQRNLIFLKGCVPGYK 452 >gi|32475058|ref|NP_868052.1| 50S ribosomal protein L3 [Rhodopirellula baltica SH 1] gi|42559597|sp|Q7UN20|RL3_RHOBA RecName: Full=50S ribosomal protein L3 gi|32445598|emb|CAD75599.1| 50S ribosomal protein L3 [Rhodopirellula baltica SH 1] Length = 228 Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 79/216 (36%), Positives = 119/216 (55%), Gaps = 22/216 (10%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ RK+GMT ++ +G +PVTV+ C V+ R+ D++GY AVQ+G + + Sbjct: 1 MSPSILGRKIGMTQIFLEDGTAVPVTVVQAGPCHVLQVRSKDRDGYEAVQMGFEDKPRRL 60 Query: 61 VSKPMRGFFSSV-------------------NVSPKKKLFEFRVQKDDDLLPVGSVFSPS 101 + RG +++ + P++ + EFR + + VG + Sbjct: 61 AKRSERGQVATIESKRSKKRSAAGIEAPAKADCEPQRFVREFRGSSEAN---VGDTLTVE 117 Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F + VD+TG + G+GF+G MKRHNF G RATHGV HR G TG P R FK K Sbjct: 118 QFNDVKKVDITGTSKGRGFAGVMKRHNFAGQRATHGVKKCHRHAGGTGMSASPSRTFKGK 177 Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197 +MAG+ G +VT +NLEVV VD + L++++G VPG Sbjct: 178 RMAGQYGNAKVTTRNLEVVRVDAENNLLMIRGAVPG 213 >gi|303237517|ref|ZP_07324082.1| 50S ribosomal protein L3 [Prevotella disiens FB035-09AN] gi|302482337|gb|EFL45367.1| 50S ribosomal protein L3 [Prevotella disiens FB035-09AN] Length = 204 Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 83/203 (40%), Positives = 122/203 (60%), Gaps = 4/203 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G GEAK SK Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTIEKDGYKAVQLGFGEAKESRTSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G F +PKK L EF+ ++ +L G + F + VDV G + GKGF G Sbjct: 63 PQQGHFKKAGTTPKKHLAEFKFDEEYNL---GDTITVELFNDTKFVDVVGTSKGKGFQGV 119 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGG+ ++THG R GS G P +VFK +M G MGG+ VT +NL+V+ V Sbjct: 120 MKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGHMGGDTVTTQNLQVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205 + ++LVKG V G ++ I+ Sbjct: 180 IPEHNILLVKGSVAGCNGSTLII 202 >gi|15605616|ref|NP_212989.1| ribosomal protein L03 [Aquifex aeolicus VF5] gi|3914748|sp|O66431|RL3_AQUAE RecName: Full=50S ribosomal protein L3 gi|2982767|gb|AAC06393.1| ribosomal protein L03 [Aquifex aeolicus VF5] Length = 241 Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 90/206 (43%), Positives = 119/206 (57%), Gaps = 12/206 (5%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLD-NCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ K+GMT V +G IPVTV+ N V V K+GY A+Q+GA EAK K Sbjct: 1 MPLGLIGEKVGMTRVLLKDGTAIPVTVIKFPVNYVVQVKSQNTKDGYNALQIGAYEAKEK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-----LPVGSVFSPSYFTVGQLVDVTGM 114 +++KP+ G F V ++L+EFRV ++ L V VF P G LVDV G+ Sbjct: 61 HLTKPLIGHFKKHGVPLLRRLWEFRVDNPEEFQSGQQLKVEDVFKP-----GDLVDVWGI 115 Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 + G+GF+GAMKR +F G +HG HR+ G+ G R DPGRV+K K+M G G V V Sbjct: 116 SKGRGFAGAMKRWDFAGFPKSHGHRY-HRAVGAIGQRTDPGRVWKGKRMPGHYGAKPVRV 174 Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKK 200 + L VV V + ILVKG VPG K Sbjct: 175 QGLFVVDVLPEENAILVKGSVPGHNK 200 >gi|224123986|ref|XP_002319213.1| predicted protein [Populus trichocarpa] gi|222857589|gb|EEE95136.1| predicted protein [Populus trichocarpa] Length = 222 Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 81/199 (40%), Positives = 112/199 (56%), Gaps = 2/199 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGM + G+ +PVTV+ +V +T +GY AVQVG + K ++ Sbjct: 8 GVMGTKLGMMTYFEPNGKVVPVTVVGFREGNIVTQIKTDATDGYDAVQVGYRRVRDKKLT 67 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G V P + L EFR+Q D + F G LVDV+G TIGKGF G Sbjct: 68 KPEMGHLEKAGVIPMRHLQEFRLQGLDGFEIGQKLLFEELFKEGDLVDVSGTTIGKGFQG 127 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHNF +HG S SHR+ GS G PGRV+K KKM GRMGG + ++ L++V + Sbjct: 128 GIKRHNFKRGPMSHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKI 186 Query: 183 DDKRGLILVKGCVPGAKKN 201 D+ ++++KG +PG N Sbjct: 187 DNDLRVVMIKGALPGKPGN 205 >gi|286142696|gb|ADC41378.1| ribosomal protein L3 [Streptomyces microflavus] gi|286142702|gb|ADC41381.1| ribosomal protein L3 [Streptomyces microflavus] gi|286142704|gb|ADC41382.1| ribosomal protein L3 [Streptomyces alboviridis] gi|286142706|gb|ADC41383.1| ribosomal protein L3 [Streptomyces microflavus] gi|286142712|gb|ADC41386.1| ribosomal protein L3 [Streptomyces albidus] Length = 167 Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 78/167 (46%), Positives = 100/167 (59%), Gaps = 1/167 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVELRT-PDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 A HGV HRS GS G PGRVFK +MAGRMG RVT +NL + Sbjct: 120 GAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTI 166 >gi|330752348|emb|CBL87301.1| ribosomal protein L3 [uncultured Sphingobacteria bacterium] Length = 205 Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 76/204 (37%), Positives = 119/204 (58%), Gaps = 4/204 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 V+ +K+GMT ++ + G++ P TV+ + + ++ + +GY +VQ+ + E K K+ +KP Sbjct: 4 VIGKKIGMTAIFTVNGKKEPCTVVSCEPNVITQIKSEESDGYSSVQIASIEKKEKSSNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G F+ +PK+ + E R + VG F F GQ VDV G + GKGF G + Sbjct: 64 EMGHFAKAKTTPKRVVMEIRDYTGEGT--VGDSFGVEIFEEGQFVDVVGTSKGKGFQGVV 121 Query: 125 KRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 KRH F G+ ATHG R+ GS G P RVFK +MAGRMGG RV ++NL ++ VD Sbjct: 122 KRHGFRGVGEATHGQHNRLRAPGSLGAGSTPSRVFKGTRMAGRMGGERVKMQNLRILKVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207 + ++++ G VPG K S++++ Sbjct: 182 TENNVLVISGAVPG-HKGSYVIIE 204 >gi|91216910|ref|ZP_01253874.1| 50S ribosomal protein L3 [Psychroflexus torquis ATCC 700755] gi|91185071|gb|EAS71450.1| 50S ribosomal protein L3 [Psychroflexus torquis ATCC 700755] Length = 204 Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 77/205 (37%), Positives = 119/205 (58%), Gaps = 3/205 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G + KN + Sbjct: 2 SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTNEVDGYEALQLGFDDKSDKNAT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F S K+K+ EF+ K++ +G + F + VDV+ + GKGF G Sbjct: 62 KADLGHFKKAGSSVKRKVIEFQGFKEE--YKLGDHITVDLFKENEFVDVSATSKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH F G + THG R+ GS G P R+FK KM G+MG +V V+NL V+ V Sbjct: 120 VVKRHGFAGSQRTHGQQSMLRAPGSVGAASYPARIFKGMKMGGQMGSQKVKVQNLRVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 ++ LI++KGCVPG N+++ ++ Sbjct: 180 VPEKNLIVIKGCVPG-HNNTYVTIQ 203 >gi|297621720|ref|YP_003709857.1| 50S ribosomal protein L3 [Waddlia chondrophila WSU 86-1044] gi|297377021|gb|ADI38851.1| 50S ribosomal protein L3 [Waddlia chondrophila WSU 86-1044] Length = 220 Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 81/216 (37%), Positives = 123/216 (56%), Gaps = 9/216 (4%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN---- 60 ++ +K GMT +++ +G + TV+ ++ V +T +GY AVQVG + K+ Sbjct: 5 LMGKKRGMTHLFDEKGNVVVCTVIEMEPNVVTQIKTQGTDGYDAVQVGFDKVTTKDPRTM 64 Query: 61 ---VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 V KP+RG F V P++ + E R+ D VG F + F + +D T ++IG Sbjct: 65 DQRVKKPLRGHFKKAGVEPRRHMLESRLS-DVTGYQVGQEFDVTAFNEVKFIDATAISIG 123 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF GAMK H F G+ A+HG +HRS GSTG R PGR F K A +MG +VT++NL Sbjct: 124 KGFQGAMKLHGFSGMPASHGAKKNHRSLGSTGGRSTPGRCFPGGKRASQMGNRQVTIQNL 183 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 E+V + + +++VKG +PG KN + +R + K A Sbjct: 184 EIVQIIPEENVVVVKGSIPGP-KNGVVTMRQAVKKA 218 >gi|222150445|ref|YP_002559598.1| 50S ribosomal protein L3 [Macrococcus caseolyticus JCSC5402] gi|254803679|sp|B9E9J1|RL3_MACCJ RecName: Full=50S ribosomal protein L3 gi|222119567|dbj|BAH16902.1| 50S ribosomal protein L3 [Macrococcus caseolyticus JCSC5402] Length = 220 Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 85/208 (40%), Positives = 117/208 (56%), Gaps = 10/208 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY ++Q+G + + Sbjct: 1 MTKGILGRKVGMTQVFGENGELIPVTVVEAAQNVVLQKKTEEVDGYSSIQIGFEDKQAYK 60 Query: 59 ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 K +KP G +PK+ + EFR D + VG + F G +VDVT Sbjct: 61 ADRKSNKFATKPAEGHAKKAGTAPKRFIREFR-NVDTEAYEVGQEVTVDTFQTGDIVDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH +HG S HR GS G D +VFK K + GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQSRGPMSHG-SRYHRRPGSMGMASDASKVFKGKALPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKK 200 T++NLE+V VD + +ILVKG VPG KK Sbjct: 179 TMQNLEIVKVDAENNVILVKGNVPGPKK 206 >gi|257784963|ref|YP_003180180.1| 50S ribosomal protein L3 [Atopobium parvulum DSM 20469] gi|257473470|gb|ACV51589.1| ribosomal protein L3 [Atopobium parvulum DSM 20469] Length = 206 Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 90/207 (43%), Positives = 122/207 (58%), Gaps = 3/207 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M + ++ RKLGMT V++ +PVTV+ C V +T++ +GY AVQ+G G+ K+ Sbjct: 1 MVNTILGRKLGMTQVWDENDNVVPVTVVLAGPCTVSQVKTVETDGYNAVQIGFGDISEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM G F + V P + L E RV+ D G V + + F+ VDVTG + GKGF Sbjct: 61 VNKPMAGHFKAQGVEPMRYLREVRVE-DASEHKTGDVVTVADFSEVTTVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF THG S + R GS G P RV K M G MG RVTVKNL++V Sbjct: 120 QGTVKRWNFSRGPMTHG-SRNQRRPGSIGQCAYPARVRKGLHMYGHMGAERVTVKNLKLV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207 VD ++ L+L+KG VPG KN+ + VR Sbjct: 179 RVDAEQNLMLIKGAVPGG-KNALVQVR 204 >gi|157363442|ref|YP_001470209.1| 50S ribosomal protein L3 [Thermotoga lettingae TMO] gi|166990942|sp|A8F4R1|RL3_THELT RecName: Full=50S ribosomal protein L3 gi|157314046|gb|ABV33145.1| ribosomal protein L3 [Thermotoga lettingae TMO] Length = 210 Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 81/197 (41%), Positives = 115/197 (58%), Gaps = 6/197 (3%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RK+GMT ++ I IPVTV+ C VV + +GY A+QVG +K V+KP Sbjct: 4 ILGRKIGMTRLF-INDVSIPVTVVRAGPCYVVQKKNPQIDGYCAIQVGF--EHLKRVNKP 60 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 + G F V P + L E R++ +++L +G F G+ VD+TG T G+GFSG Sbjct: 61 LEGHFKKAQVKPLRLLREIRLEDENELDSYEIGQEIKLDIFQPGEKVDITGWTKGRGFSG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR F G HG S HR GS G +P ++FK KKM GR G RVT+ NLEV+ + Sbjct: 121 GIKRWGFSGGPRAHG-SKFHRELGSLGQHTEPAKIFKGKKMPGRYGNERVTIHNLEVIKI 179 Query: 183 DDKRGLILVKGCVPGAK 199 D + L+++KG VPGA+ Sbjct: 180 DLENNLLVLKGSVPGAR 196 >gi|325294396|ref|YP_004280910.1| 50S ribosomal protein L3 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064844|gb|ADY72851.1| 50S ribosomal protein L3 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 207 Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 86/199 (43%), Positives = 118/199 (59%), Gaps = 6/199 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT ++ +G+ I VTV+ C VV RT +++GY A+Q+G E K K+ SK Sbjct: 3 GILGRKVGMTQIFTEDGKAIAVTVIEAGPCTVVQKRTPERDGYSALQLGFME-KNKHESK 61 Query: 64 ---PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 P+ G F + P + L E + + D VG + F G+ VD+TG + G+GF Sbjct: 62 FPKPLLGHFKKAGIKPTRWLKEVKFD-NIDQYNVGDKITVEIFQPGEKVDITGTSKGRGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH FGG R +HG S H GS G PGRV K K+MAG G VT++NLE+V Sbjct: 121 AGYHKRHGFGGGRKSHG-SDFHEGPGSIGACAFPGRVHKGKRMAGHYGNETVTIRNLEIV 179 Query: 181 SVDDKRGLILVKGCVPGAK 199 V ++ LILVKG VPG K Sbjct: 180 DVIPEKNLILVKGSVPGHK 198 >gi|257790717|ref|YP_003181323.1| 50S ribosomal protein L3 [Eggerthella lenta DSM 2243] gi|317488572|ref|ZP_07947117.1| 50S ribosomal protein L3 [Eggerthella sp. 1_3_56FAA] gi|325831933|ref|ZP_08165030.1| 50S ribosomal protein L3 [Eggerthella sp. HGA1] gi|257474614|gb|ACV54934.1| ribosomal protein L3 [Eggerthella lenta DSM 2243] gi|316912314|gb|EFV33878.1| 50S ribosomal protein L3 [Eggerthella sp. 1_3_56FAA] gi|325486254|gb|EGC88706.1| 50S ribosomal protein L3 [Eggerthella sp. HGA1] Length = 206 Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 89/207 (42%), Positives = 124/207 (59%), Gaps = 3/207 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M + + +K+GMT ++N + R +PVTV+ + + +T D +GY AVQ+G G K K Sbjct: 1 MINAIYGKKIGMTQIFNEDDRVVPVTVIQAEPNTICQVKTKDSDGYEAVQLGFGAIKEKK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM G F+ +P + L E RV+ + VG + + F + VDVTG + GKGF Sbjct: 61 VNKPMAGHFAKQGTAPTRYLREVRVENAGEY-KVGDQQTVAAFAETKKVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR+ F G HG HR+ GS G P RVFK K+ G MG + VTVKNLEVV Sbjct: 120 AGVMKRYGFRGGPGGHGAHF-HRAPGSVGQCATPSRVFKGLKLPGHMGVDTVTVKNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207 +D+++ LILVKG +PG KN + VR Sbjct: 179 RIDEEQNLILVKGAIPGG-KNGVVRVR 204 >gi|315186331|gb|EFU20092.1| 50S ribosomal protein L3 [Spirochaeta thermophila DSM 6578] Length = 198 Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 86/196 (43%), Positives = 114/196 (58%), Gaps = 3/196 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V++ G +PVTV+ ++ VV RT +++GY A+ +GA K KP G F Sbjct: 1 MTQVFDANGYVVPVTVIKVEKNTVVDVRTPERHGYRALVLGAFPLKASRAVKPYLGQFQK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 + PKK L E R + D P G F + VDV G++ GKG+ G MKRH F G Sbjct: 61 RGLEPKKVLREIR-DFEGDYKP-GDEIGVEIFEGVRFVDVRGLSKGKGYQGVMKRHGFSG 118 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 A+HG S HR+HGSTG P +V K KMAGRMGG +V V+NL +V VD +RG +LV Sbjct: 119 GPASHG-SKFHRAHGSTGQATYPAKVLKGTKMAGRMGGVQVCVQNLRIVEVDKERGCLLV 177 Query: 192 KGCVPGAKKNSWILVR 207 +G VPG +K I+ R Sbjct: 178 EGAVPGPRKGVVIVTR 193 >gi|81859531|sp|Q5HDV8|RL3_STAAC RecName: Full=50S ribosomal protein L3 gi|57285020|gb|AAW37114.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus COL] gi|323442744|gb|EGB00370.1| 50S ribosomal protein L3 [Staphylococcus aureus O46] Length = 209 Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 90/208 (43%), Positives = 116/208 (55%), Gaps = 11/208 (5%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG--------AGEAKVKNVSK 63 MT V+ G IPVTV+ V+ +T++ +GY A+QVG K +K Sbjct: 1 MTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYKKDAKSNKYANK 60 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G + +PK+ + EFR D D VG S F G ++DVTG++ GKGF GA Sbjct: 61 PAEGHAKKADAAPKRFIREFR-NVDVDAYEVGQEVSVDTFVAGDVIDVTGVSKGKGFQGA 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KRH +HG S HR+ GS G D RVFK +KM GRMGGN VTV+NLEVV VD Sbjct: 120 IKRHGQSRGPMSHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTVTVQNLEVVQVD 178 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 + +ILVKG VPG KK + +R S K Sbjct: 179 TENKVILVKGNVPGPKK-GLVEIRTSIK 205 >gi|223936428|ref|ZP_03628340.1| ribosomal protein L3 [bacterium Ellin514] gi|223894946|gb|EEF61395.1| ribosomal protein L3 [bacterium Ellin514] Length = 224 Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 87/219 (39%), Positives = 125/219 (57%), Gaps = 10/219 (4%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLG T VY+ +G PVTV+ +V+ +T D +GY AVQ+G + K + V+K Sbjct: 3 GLLGKKLGQTRVYDDKGVLWPVTVVLAGPNRVLQCKTQDSDGYNAVQLGFDDQKDQRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPV--GSVFSPSYFTVGQLVDVTGMTIGKGFS 121 P+ G N + K++ EFR D L V G V + F G +D G+T G+GF Sbjct: 63 PLLGHIKKHNGAAVKRIREFR----DFTLSVKPGDVIGATIFAKGDFIDAIGVTKGRGFE 118 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF G THG HR G+ G R PG V + +M G MG + T +NLE++ Sbjct: 119 GVMKRHNFAGGDMTHGAKGWHRRAGAIGQRLFPGTVMRGMRMPGHMGQVQRTTQNLEIIQ 178 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220 V + L+L+KG +PGA K ++++R+S K N KG V Sbjct: 179 VREADNLLLIKGAIPGA-KGDYVVIRESKK---NPKGSV 213 >gi|302824121|ref|XP_002993706.1| hypothetical protein SELMODRAFT_431753 [Selaginella moellendorffii] gi|300138430|gb|EFJ05198.1| hypothetical protein SELMODRAFT_431753 [Selaginella moellendorffii] Length = 222 Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 82/199 (41%), Positives = 111/199 (55%), Gaps = 2/199 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ K+GM + +GR IPVTV+ +V +T +GY AVQVG + ++ Sbjct: 8 GVMGTKVGMMTHFMPDGRAIPVTVIGFHEGNIVTQVKTEPTDGYNAVQVGYLRVRDTKLT 67 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G + + P + L EFR+ D P + F VG LVDV+G +IGKGF G Sbjct: 68 KPELGHLNKIGTIPMRHLQEFRLVSVDGFEPSQRLNVEDIFKVGDLVDVSGKSIGKGFQG 127 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHNF THG S SHR GS G PGRV+ KKM GRMG + ++ LE++ + Sbjct: 128 GIKRHNFKRGLMTHG-SKSHRQLGSIGAGTTPGRVYPGKKMPGRMGFQKTKIRKLEIIKI 186 Query: 183 DDKRGLILVKGCVPGAKKN 201 D + +LVKG VPG + N Sbjct: 187 DPELRAVLVKGAVPGKRGN 205 >gi|313884599|ref|ZP_07818360.1| 50S ribosomal protein L3 [Eremococcus coleocola ACS-139-V-Col8] gi|312620383|gb|EFR31811.1| 50S ribosomal protein L3 [Eremococcus coleocola ACS-139-V-Col8] Length = 210 Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 84/212 (39%), Positives = 122/212 (57%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT + G IPVTV+ V+ ++L+ +GY AVQ+G + + Sbjct: 1 MTKGILGKKVGMTQYFTENGELIPVTVVEATPNVVLQVKSLENDGYEAVQLGYQDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EFR + VG + F G ++DVTG + GKGF Sbjct: 61 ATKPHKGHVAKANATPKRFIREFR-NVELGSFEVGQEITVETFEAGDIIDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G D +VFK K + G+ GG +VT++NLEVV Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGMASDASKVFKGKNLPGQTGGEQVTIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +V + LIL+KG VPG KK S + +R + KS Sbjct: 179 AVVAEDNLILIKGNVPGPKK-SLVEIRTAVKS 209 >gi|286142600|gb|ADC41330.1| ribosomal protein L3 [Streptomyces griseus] gi|286142604|gb|ADC41332.1| ribosomal protein L3 [Streptomyces griseus] gi|286142610|gb|ADC41335.1| ribosomal protein L3 [Streptomyces griseus] gi|286142666|gb|ADC41363.1| ribosomal protein L3 [Streptomyces griseus] gi|286142670|gb|ADC41365.1| ribosomal protein L3 [Streptomyces griseus] gi|286142708|gb|ADC41384.1| ribosomal protein L3 [Streptomyces albovinaceus] gi|286142720|gb|ADC41390.1| ribosomal protein L3 [Streptomyces griseus] gi|286142726|gb|ADC41393.1| ribosomal protein L3 [Streptomyces griseus] gi|286142730|gb|ADC41395.1| ribosomal protein L3 [Streptomyces griseus] gi|286142742|gb|ADC41401.1| ribosomal protein L3 [Streptomyces griseus] gi|286142744|gb|ADC41402.1| ribosomal protein L3 [Streptomyces griseus] gi|286142748|gb|ADC41404.1| ribosomal protein L3 [Streptomyces griseus] gi|286142760|gb|ADC41410.1| ribosomal protein L3 [Streptomyces griseus] gi|286142784|gb|ADC41422.1| ribosomal protein L3 [Streptomyces griseus] Length = 167 Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 77/167 (46%), Positives = 100/167 (59%), Gaps = 1/167 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVELRT-PDASEYTLGQEVTAAVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 A HG HRS GS G PGRVFK +MAGRMG RVT +NL + Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTI 166 >gi|167759862|ref|ZP_02431989.1| hypothetical protein CLOSCI_02225 [Clostridium scindens ATCC 35704] gi|167662481|gb|EDS06611.1| hypothetical protein CLOSCI_02225 [Clostridium scindens ATCC 35704] Length = 226 Score = 141 bits (356), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 86/228 (37%), Positives = 126/228 (55%), Gaps = 19/228 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK- 59 M+ ++A K+GMT +++ +G PVTVL C V +T++ +GY AVQVG + K K Sbjct: 1 MKKAILATKVGMTQIFSEDGTLTPVTVLQAGPCVVTQVKTVENDGYDAVQVGFVDKKDKI 60 Query: 60 ---------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V+K +G F+ VS K+ + EF+++ + + F Sbjct: 61 VNKDKSGKKEIAHRHGVTKAEQGHFAKAGVSGKRFVREFKLENAGEY-ELAQEIKADIFE 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G +D T ++ GKGF GA+KRH THG S HR GS G DP +VFK KKM Sbjct: 120 AGDKIDATAISKGKGFQGAIKRHGQHRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G MG ++T++NLE+V VD + LILVKG VPG KK S + ++++ K+ Sbjct: 179 GHMGSKKITIQNLEIVRVDAENNLILVKGSVPGPKK-SLVTIKEAVKA 225 >gi|241888995|ref|ZP_04776299.1| 50S ribosomal protein L3 [Gemella haemolysans ATCC 10379] gi|329768273|ref|ZP_08259774.1| 50S ribosomal protein L3 [Gemella haemolysans M341] gi|241864244|gb|EER68622.1| 50S ribosomal protein L3 [Gemella haemolysans ATCC 10379] gi|328837472|gb|EGF87101.1| 50S ribosomal protein L3 [Gemella haemolysans M341] Length = 220 Score = 141 bits (356), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 92/224 (41%), Positives = 127/224 (56%), Gaps = 18/224 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--- 57 M G++ RK+GMT ++ G IPVTV+ V+ +T + GY A+Q+G + + Sbjct: 1 MTKGILGRKVGMTQIFAENGELIPVTVVEAKGNVVLQKKTEEVEGYNAIQLGFDDKRPYD 60 Query: 58 -------VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQL 108 VK +KP +G N +PK+ + E R D ++ VG F G L Sbjct: 61 KERKDRLVKVANKPEQGHADKANTAPKRFVREIR---DAEVANYEVGQEVQVDIFAAGDL 117 Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168 VDVTG++ GKGF GA+KRH HG S HR GS G P RVFK K + G+MG Sbjct: 118 VDVTGVSKGKGFQGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKALPGQMG 175 Query: 169 GNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G VT +NLE+VSVD + GLILVKGC+PG+KK S++ ++ + KS Sbjct: 176 GVTVTTQNLEIVSVDVENGLILVKGCIPGSKK-SFVKIQSAVKS 218 >gi|283794897|ref|YP_003359250.1| ribosomal protein L3 [Cryptomonas paramecium] gi|253981869|gb|ACT46786.1| ribosomal protein L3 [Cryptomonas paramecium] Length = 210 Score = 141 bits (356), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 84/199 (42%), Positives = 117/199 (58%), Gaps = 2/199 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT V++ G IP T++ + C V +T+ K GY ++Q+G + Sbjct: 3 MNFGILGTKVGMTNVFDPSGVAIPGTIVKVGPCIVTQVKTVPKEGYSSIQLGYFSVAKAS 62 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SKP G N + L EFRV D+ L +G + S F+VG V V G ++GKGF Sbjct: 63 LSKPELGHLKISNSQAVRYLREFRVDSPDENL-LGQEVTVSKFSVGDRVSVAGKSVGKGF 121 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG +KRH+F THG S +HR GS G PGRVF K+MAGR+GG +VT+KNL VV Sbjct: 122 SGTVKRHHFTRGPMTHG-SKNHREPGSIGMGTTPGRVFPGKRMAGRLGGKKVTIKNLRVV 180 Query: 181 SVDDKRGLILVKGCVPGAK 199 V + +++KG VPG K Sbjct: 181 FVSLENNFLVLKGSVPGKK 199 >gi|50364938|ref|YP_053363.1| 50S ribosomal protein L3 [Mesoplasma florum L1] gi|81827327|sp|Q6F1Z4|RL3_MESFL RecName: Full=50S ribosomal protein L3 gi|50363494|gb|AAT75479.1| 50S ribosomal protein L3 [Mesoplasma florum L1] Length = 238 Score = 141 bits (356), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 87/215 (40%), Positives = 131/215 (60%), Gaps = 10/215 (4%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+ MT V+ G+ +PVTV+ + ++ +TL+ NGY+A Q+G + + V+K Sbjct: 3 GILGRKVEMTQVFTANGKLVPVTVVEVQPNTILQVKTLETNGYVATQLGVFDKRENLVNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSG 122 P G F N PK+ + E R + + VGSV S S F GQ VDVTG++ GKGF+G Sbjct: 63 PELGQFKKANSVPKRFVKEIR---NMEGFEVGSVISASDIFETGQYVDVTGISKGKGFAG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KRHN+ HG S HR GS G + R+FK+KKMAG MG + TV+NLEV+++ Sbjct: 120 AIKRHNYSRGPMAHG-SGYHRGIGSMGAIIN--RIFKSKKMAGHMGHVKRTVQNLEVIAI 176 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 D+ ++LVKG +PG K ++ ++ + K N + Sbjct: 177 DNN--IMLVKGSIPGPNK-GFVTIKANVKGLSNTQ 208 >gi|51209943|ref|YP_063607.1| ribosomal protein L3 [Gracilaria tenuistipitata var. liui] gi|68052932|sp|Q6B8V3|RK3_GRATL RecName: Full=50S ribosomal protein L3, chloroplastic gi|50657697|gb|AAT79682.1| 50S ribosomal protein L3 [Gracilaria tenuistipitata var. liui] Length = 205 Score = 141 bits (356), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 74/201 (36%), Positives = 121/201 (60%), Gaps = 2/201 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +K+GMT +++ G+ +PVT+L L C + + ++ +GY A+Q+G + Sbjct: 1 MKIGLLGKKIGMTQIFDPGGKALPVTILKLGPCLITDIKKMESHGYAAIQIGYVKVNGNK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++K G + N+ K L E++V ++ +G + ++ Q + V+G +IGKGF Sbjct: 61 LNKAQIGHLNKYNMPLVKFLKEYKVASTENY-QIGKWITVEDLSINQNISVSGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNF +HG S +HR GS G PG+VF KKMAGRMGG +VT++NL+++ Sbjct: 120 TGCIKRHNFSRGPMSHG-SKNHRQPGSIGAGTTPGKVFAGKKMAGRMGGKKVTIQNLKII 178 Query: 181 SVDDKRGLILVKGCVPGAKKN 201 + LI+VKG VPG N Sbjct: 179 DIKINNNLIIVKGSVPGKPGN 199 >gi|83319916|ref|YP_424660.1| 50S ribosomal protein L3 [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|90110058|sp|P10134|RL3_MYCCT RecName: Full=50S ribosomal protein L3 gi|83283802|gb|ABC01734.1| 50 ribosomal protein L3 [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 223 Score = 141 bits (356), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 81/209 (38%), Positives = 130/209 (62%), Gaps = 8/209 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+ MT V+ G+ +PVTV+ + V+ +T+D +GY+AVQ+G + +V V+K Sbjct: 3 GILGRKVEMTQVFTNSGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLVNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSG 122 P G F N +PK+ + E R + + +G V + S F G+ VDVTG++ GKGF+G Sbjct: 63 PELGHFKKANSNPKRFVKEIRNMQGYE---IGQVINVSDIFVSGEYVDVTGISKGKGFAG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHN+ HG S HR GS G + R+FK+KKM G MG + T++NLE++++ Sbjct: 120 GIKRHNYSRGPMAHG-SGYHRGIGSMGAIIN--RIFKSKKMPGHMGNAKRTIQNLEIIAI 176 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D ++L+KG +PG KNS++ ++ + K Sbjct: 177 DQSNNIMLIKGSIPGP-KNSFVQIKQNVK 204 >gi|286142686|gb|ADC41373.1| ribosomal protein L3 [Streptomyces olivoviridis] Length = 167 Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 77/167 (46%), Positives = 100/167 (59%), Gaps = 1/167 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVELRT-PDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 A HGV HRS GS G PGRVFK +MAGRMG RVT +NL + Sbjct: 120 GAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTI 166 >gi|286142602|gb|ADC41331.1| ribosomal protein L3 [Streptomyces griseus] gi|286142606|gb|ADC41333.1| ribosomal protein L3 [Streptomyces griseus] gi|286142612|gb|ADC41336.1| ribosomal protein L3 [Streptomyces griseus] gi|286142614|gb|ADC41337.1| ribosomal protein L3 [Streptomyces griseus] gi|286142616|gb|ADC41338.1| ribosomal protein L3 [Streptomyces griseus] gi|286142660|gb|ADC41360.1| ribosomal protein L3 [Streptomyces griseus] gi|286142662|gb|ADC41361.1| ribosomal protein L3 [Streptomyces griseus] gi|286142664|gb|ADC41362.1| ribosomal protein L3 [Streptomyces griseus] gi|286142668|gb|ADC41364.1| ribosomal protein L3 [Streptomyces griseus] gi|286142672|gb|ADC41366.1| ribosomal protein L3 [Streptomyces griseus] gi|286142674|gb|ADC41367.1| ribosomal protein L3 [Streptomyces griseus] gi|286142676|gb|ADC41368.1| ribosomal protein L3 [Streptomyces griseus] gi|286142678|gb|ADC41369.1| ribosomal protein L3 [Streptomyces griseus] gi|286142680|gb|ADC41370.1| ribosomal protein L3 [Streptomyces griseus] gi|286142682|gb|ADC41371.1| ribosomal protein L3 [Streptomyces sp. DSM 40932] gi|286142688|gb|ADC41374.1| ribosomal protein L3 [Streptomyces anulatus] gi|286142690|gb|ADC41375.1| ribosomal protein L3 [Streptomyces reticuli] gi|286142750|gb|ADC41405.1| ribosomal protein L3 [Streptomyces griseus] gi|286142752|gb|ADC41406.1| ribosomal protein L3 [Streptomyces griseus] gi|286142762|gb|ADC41411.1| ribosomal protein L3 [Streptomyces griseus] gi|286142764|gb|ADC41412.1| ribosomal protein L3 [Streptomyces griseus] gi|286142770|gb|ADC41415.1| ribosomal protein L3 [Streptomyces griseus] gi|286142772|gb|ADC41416.1| ribosomal protein L3 [Streptomyces griseus] gi|286142774|gb|ADC41417.1| ribosomal protein L3 [Streptomyces griseus] gi|286142776|gb|ADC41418.1| ribosomal protein L3 [Streptomyces griseus] gi|286142778|gb|ADC41419.1| ribosomal protein L3 [Streptomyces griseus] gi|286142780|gb|ADC41420.1| ribosomal protein L3 [Streptomyces griseus] gi|286142790|gb|ADC41425.1| ribosomal protein L3 [Streptomyces sp. E1002] Length = 167 Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 77/167 (46%), Positives = 99/167 (59%), Gaps = 1/167 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVELRT-PDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 A HG HRS GS G PGRVFK +MAGRMG RVT +NL + Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTI 166 >gi|153816252|ref|ZP_01968920.1| hypothetical protein RUMTOR_02501 [Ruminococcus torques ATCC 27756] gi|145846435|gb|EDK23353.1| hypothetical protein RUMTOR_02501 [Ruminococcus torques ATCC 27756] Length = 242 Score = 141 bits (355), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 89/228 (39%), Positives = 124/228 (54%), Gaps = 20/228 (8%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M+ ++A K+GMT ++N E G IPVTVL C V +T++ +GY AVQVG + K K Sbjct: 16 MKKAILATKVGMTQIFNHEDGVLIPVTVLQAGPCVVTQVKTVENDGYSAVQVGYVDKKDK 75 Query: 60 ----------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103 V+K +G F VS K+ + EFR ++ + F Sbjct: 76 IVTKDGSGRKAIAHRNGVTKAEKGHFDKAGVSGKRYVKEFRFDNAEEY-ALAQEIKADIF 134 Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 G +D T ++ GKGF GA+KRH THG S HR GS G DP +VFK KKM Sbjct: 135 AEGDHIDATAISKGKGFQGAIKRHGQSRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKM 193 Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 G+MG ++TV+NLE+V VD + L+LVKG VPG KK + ++++ K Sbjct: 194 PGQMGNKKITVQNLEIVRVDAENNLLLVKGSVPGPKK-CLVTIKETVK 240 >gi|313665577|ref|YP_004047448.1| 50S ribosomal protein L3 [Mycoplasma leachii PG50] gi|312949526|gb|ADR24122.1| 50S ribosomal protein L3 [Mycoplasma leachii PG50] Length = 223 Score = 141 bits (355), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 81/209 (38%), Positives = 130/209 (62%), Gaps = 8/209 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+ MT V+ G+ +PVTV+ + V+ +T+D +GY+AVQ+G + +V V+K Sbjct: 3 GILGRKVEMTQVFTNSGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLVNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSG 122 P G F N +PK+ + E R + + +G V + S F G+ VDVTG++ GKGF+G Sbjct: 63 PELGHFKKANSNPKRFVKEIRNMQGYE---IGQVINVSDIFVSGEYVDVTGISKGKGFAG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHN+ HG S HR GS G + R+FK+KKM G MG + T++NLE++++ Sbjct: 120 GIKRHNYSRGPMAHG-SGYHRGIGSMGAIIN--RIFKSKKMPGHMGNAKRTIQNLEIIAI 176 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D ++L+KG +PG KNS++ ++ + K Sbjct: 177 DQTNNIMLIKGSIPGP-KNSFVQIKQNVK 204 >gi|317501774|ref|ZP_07959960.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 8_1_57FAA] gi|331088705|ref|ZP_08337615.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 3_1_46FAA] gi|316896807|gb|EFV18892.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 8_1_57FAA] gi|330407228|gb|EGG86731.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 3_1_46FAA] Length = 227 Score = 141 bits (355), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 89/228 (39%), Positives = 124/228 (54%), Gaps = 20/228 (8%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M+ ++A K+GMT ++N E G IPVTVL C V +T++ +GY AVQVG + K K Sbjct: 1 MKKAILATKVGMTQIFNHEDGVLIPVTVLQAGPCVVTQVKTVENDGYSAVQVGYVDKKDK 60 Query: 60 ----------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103 V+K +G F VS K+ + EFR ++ + F Sbjct: 61 IVTKDGSGRKAIAHRNGVTKAEKGHFDKAGVSGKRYVKEFRFDNAEEY-ALAQEIKADIF 119 Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 G +D T ++ GKGF GA+KRH THG S HR GS G DP +VFK KKM Sbjct: 120 AEGDHIDATAISKGKGFQGAIKRHGQSRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKM 178 Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 G+MG ++TV+NLE+V VD + L+LVKG VPG KK + ++++ K Sbjct: 179 PGQMGNKKITVQNLEIVRVDAENNLLLVKGSVPGPKK-CLVTIKETVK 225 >gi|255639119|gb|ACU19859.1| unknown [Glycine max] Length = 264 Score = 141 bits (355), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 81/199 (40%), Positives = 110/199 (55%), Gaps = 2/199 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGM + +G +PVTV+ +V +T +GY AVQVG + + ++ Sbjct: 50 GVMGTKLGMMSYFESDGEVVPVTVVGFKEGNIVTQIKTEATDGYDAVQVGYRRVRDRKLT 109 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G V P + L EFR+Q D + F G LVDV+G TIGKGF G Sbjct: 110 KPEMGHLHKVGAIPMRHLQEFRLQAIDGFDLNQRLLFDETFKEGDLVDVSGTTIGKGFQG 169 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHNF THG S SHR GS G PGRV+K KKM GRMGG + ++ L++V + Sbjct: 170 GIKRHNFKRGPMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKI 228 Query: 183 DDKRGLILVKGCVPGAKKN 201 D ++++KG +PG N Sbjct: 229 DKDLNVLMIKGALPGKPGN 247 >gi|323490623|ref|ZP_08095828.1| 50S ribosomal protein L3 [Planococcus donghaensis MPA1U2] gi|323395715|gb|EGA88556.1| 50S ribosomal protein L3 [Planococcus donghaensis MPA1U2] Length = 209 Score = 141 bits (355), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 87/212 (41%), Positives = 124/212 (58%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEASPNVVLQKKTVEVDGYEAIQLGFEDKRDKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + E R D +G F G +VDVTG T GKGF Sbjct: 61 SNKPSKGHVAKANTAPKRFIRELRNVNLADY-EIGQEVKVDVFAEGDVVDVTGTTKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH THG S HR GS G P RVFK KK+ G+MGG +T++NL +V Sbjct: 120 QGVIKRHGQSRGPMTHG-SRYHRRPGSMGPVA-PNRVFKQKKLPGQMGGTTITIQNLSIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPG++K + I V+ + K+ Sbjct: 178 KVDLERNLLLVKGNVPGSRK-ALIRVKSATKA 208 >gi|286142694|gb|ADC41377.1| ribosomal protein L3 [Streptomyces griseobrunneus] gi|286142698|gb|ADC41379.1| ribosomal protein L3 [Streptomyces bacillaris] gi|286142710|gb|ADC41385.1| ribosomal protein L3 [Kitasatospora mediocidica] gi|286142716|gb|ADC41388.1| ribosomal protein L3 [Streptomyces roseochromogenes] Length = 167 Score = 141 bits (355), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 77/167 (46%), Positives = 99/167 (59%), Gaps = 1/167 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDNDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVELRT-PDASEYTLGQEVTADVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 A HG HRS GS G PGRVFK +MAGRMG RVT +NL + Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTI 166 >gi|281422251|ref|ZP_06253250.1| 50S ribosomal protein L3 [Prevotella copri DSM 18205] gi|281403756|gb|EFB34436.1| 50S ribosomal protein L3 [Prevotella copri DSM 18205] Length = 204 Score = 141 bits (355), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 81/205 (39%), Positives = 126/205 (61%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ IP TV+ + C V +T++K+GY A Q+G EAK K S+ Sbjct: 3 GLIGKKIGMTSVFSADGKNIPCTVIEVGPCVVTQVKTVEKDGYKAYQLGFEEAKEKRTSQ 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 PM G F +PKK L EF+ ++ +L G + F + VDV G + GKGF G Sbjct: 63 PMMGIFKKAGTTPKKHLAEFKFDEEYNL---GDTITVEIFNDCKFVDVIGTSKGKGFQGV 119 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ ++THG R GS G P +VFK +M G+MGG+RVT +NL+V+ + Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKI 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 ++ L++VKG G K ++ ++ + Sbjct: 180 IPEQNLLIVKGSFAGCKGSTVLIEK 204 >gi|53715466|ref|YP_101458.1| 50S ribosomal protein L3 [Bacteroides fragilis YCH46] gi|60683438|ref|YP_213582.1| 50S ribosomal protein L3 [Bacteroides fragilis NCTC 9343] gi|253566670|ref|ZP_04844123.1| 50S ribosomal protein L3 [Bacteroides sp. 3_2_5] gi|255011646|ref|ZP_05283772.1| 50S ribosomal protein L3 [Bacteroides fragilis 3_1_12] gi|265767548|ref|ZP_06095214.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_16] gi|313149482|ref|ZP_07811675.1| 50S ribosomal protein L3 [Bacteroides fragilis 3_1_12] gi|81313514|sp|Q5L8A9|RL3_BACFN RecName: Full=50S ribosomal protein L3 gi|81824898|sp|Q64NK8|RL3_BACFR RecName: Full=50S ribosomal protein L3 gi|52218331|dbj|BAD50924.1| 50S ribosomal protein L3 [Bacteroides fragilis YCH46] gi|60494872|emb|CAH09679.1| putative 50S ribosomal protein L3 [Bacteroides fragilis NCTC 9343] gi|251944842|gb|EES85317.1| 50S ribosomal protein L3 [Bacteroides sp. 3_2_5] gi|263252853|gb|EEZ24365.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_16] gi|301164923|emb|CBW24484.1| putative 50S ribosomal protein L3 [Bacteroides fragilis 638R] gi|313138249|gb|EFR55609.1| 50S ribosomal protein L3 [Bacteroides fragilis 3_1_12] Length = 205 Score = 141 bits (355), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 84/205 (40%), Positives = 128/205 (62%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PK+ L EF+ +++ L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKRHLAEFKEFENE--LNLGDTVTVELFDGADYVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ ++THG R GS G P +VFK +M G+MGG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQSTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + L+L+KG VPG K S +L+ Sbjct: 181 IAEHNLLLIKGSVPGC-KGSIVLIE 204 >gi|286142796|gb|ADC41428.1| ribosomal protein L3 [Streptomyces netropsis] Length = 167 Score = 140 bits (354), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 77/167 (46%), Positives = 100/167 (59%), Gaps = 1/167 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVELRTA-DASEYTLGQEITAAVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 A HG HRS GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTV 166 >gi|44209|emb|CAA29704.1| unnamed protein product [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 223 Score = 140 bits (354), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 81/209 (38%), Positives = 130/209 (62%), Gaps = 8/209 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+ MT V+ G+ +PVTV+ + V+ +T+D +GY+AVQ+G + +V V+K Sbjct: 3 GILGRKVEMTQVFTNSGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLVNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSG 122 P G F N +PK+ + E R + + +G V + S F G+ VDVTG++ GKGF+G Sbjct: 63 PELGHFKKANSNPKRFVKEIRNMQGYE---IGQVINVSDIFVSGEYVDVTGISKGKGFAG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHN+ HG S HR GS G + R+FK+KKM G MG + T++NLE++++ Sbjct: 120 GIKRHNYSRGPMAHG-SGYHRGIGSMGAIIN--RIFKSKKMPGHMGNAKRTIQNLEIIAI 176 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D ++L+KG +PG KNS++ ++ + K Sbjct: 177 DQSNNIMLIKGPIPGP-KNSFVQIKQNVK 204 >gi|210631082|ref|ZP_03296738.1| hypothetical protein COLSTE_00623 [Collinsella stercoris DSM 13279] gi|210160170|gb|EEA91141.1| hypothetical protein COLSTE_00623 [Collinsella stercoris DSM 13279] Length = 206 Score = 140 bits (354), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 89/203 (43%), Positives = 118/203 (58%), Gaps = 3/203 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RK+GMT V++ + +PVTV+ C V +T +GY AVQ+G G+ K K+V+KP Sbjct: 5 ILGRKIGMTQVWDEDDNVVPVTVIQAGPCTVSQVKTEATDGYNAVQIGFGDIKSKHVNKP 64 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M G F+ V P + L E RV+ ++ VG V + + F VDV G + GKGF G + Sbjct: 65 MAGHFAKAGVEPVRYLREVRVENGEE-HKVGDVVTVADFESVAKVDVIGTSKGKGFQGRI 123 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR N +HG I R GS G P RV K KMAG MG RVTVKNL VV +D Sbjct: 124 KRWNQHRGPMSHGSHI-QRHPGSIGQCAYPARVLKGVKMAGHMGNARVTVKNLSVVRIDA 182 Query: 185 KRGLILVKGCVPGAKKNSWILVR 207 ++ LILVKG VPG KN + +R Sbjct: 183 EQNLILVKGAVPGG-KNGLVAIR 204 >gi|257456892|ref|ZP_05622073.1| 50S ribosomal protein L3 [Treponema vincentii ATCC 35580] gi|257445601|gb|EEV20663.1| 50S ribosomal protein L3 [Treponema vincentii ATCC 35580] Length = 208 Score = 140 bits (354), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 87/208 (41%), Positives = 123/208 (59%), Gaps = 5/208 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT +++ EGR PVTVL + VV + D GY AV +G GE K VSK Sbjct: 3 GLIGKKIGMTQLFDEEGRLTPVTVLQVVPNTVVAVKDADHFGYEAVVLGTGELKEGRVSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 F+ V+P + L EFR D + VG+ + +D+T ++ GKGF G Sbjct: 63 VYANQFAE-GVAPVRLLKEFR--GFDKEVAVGAKIGVEVLESVRYLDITAISKGKGFQGV 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR FGG RA+HG S HR GSTG PGR FKN KM G MG RVTV+NL + +D Sbjct: 120 VKRWGFGGGRASHG-SKFHREAGSTGQCTSPGRSFKNVKMPGHMGAERVTVQNLRIEKID 178 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 + G+++V+G VPG KK++ + ++ + K Sbjct: 179 PELGVVMVRGSVPG-KKDAVVFLKSAVK 205 >gi|153854970|ref|ZP_01996183.1| hypothetical protein DORLON_02189 [Dorea longicatena DSM 13814] gi|149752467|gb|EDM62398.1| hypothetical protein DORLON_02189 [Dorea longicatena DSM 13814] Length = 226 Score = 140 bits (354), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 85/228 (37%), Positives = 125/228 (54%), Gaps = 19/228 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52 M+ ++A K+GMT ++N +G PVTVL C V +T++ +GY AVQVG Sbjct: 1 MKKAILATKVGMTQIFNEDGTLTPVTVLQAGPCAVTQIKTVENDGYEAVQVGFVDKKDKI 60 Query: 53 -----AGEAKV---KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 G+ ++ V+K +G F+ V+ K+ + EF+ + + +G F Sbjct: 61 INKDKGGKKEIVHRHGVTKAEQGHFAKAGVTGKRYVREFKFENASEY-ELGQEIKADIFA 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G +D T ++ GKGF GA+KRHN HG S HR GS G DP +VFK K M Sbjct: 120 AGDKIDATAISKGKGFQGAIKRHNQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKHMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G MG ++TV+NL VV VD + L+LVKG VPG KK S + ++++ K+ Sbjct: 179 GHMGSKKITVQNLVVVRVDAENNLLLVKGSVPGPKK-SLVTIKEAVKA 225 >gi|193214800|ref|YP_001995999.1| 50S ribosomal protein L3 [Chloroherpeton thalassium ATCC 35110] gi|226725149|sp|B3QY24|RL3_CHLT3 RecName: Full=50S ribosomal protein L3 gi|193088277|gb|ACF13552.1| ribosomal protein L3 [Chloroherpeton thalassium ATCC 35110] Length = 208 Score = 140 bits (354), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 79/204 (38%), Positives = 117/204 (57%), Gaps = 1/204 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 S ++ +K+GMT +++ + IP TV+ C V +T+DK+GY A Q+ + K + Sbjct: 2 SAILGKKIGMTSLFDENRKAIPCTVIEAGPCFVSQVKTVDKDGYAAYQICFDKKKENRTA 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V P K+ EFR + D L G S F G V V+G++ GKGF+G Sbjct: 62 KPQLGHFQKSGVEPSYKMSEFRKEIFADELNAGDEVKVSIFKEGDTVKVSGVSKGKGFAG 121 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR++FGG THG S R+ GS G P R FK ++MAGR G + VT++ L+VV V Sbjct: 122 VVKRYHFGGGSKTHGQSDRLRAPGSVGGSSFPSRTFKGQRMAGRKGSDSVTIRGLKVVKV 181 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 + L+++KG VPG NS++ + Sbjct: 182 LPESNLLVIKGAVPGP-NNSYLEI 204 >gi|286142802|gb|ADC41431.1| ribosomal protein L3 [Streptomyces mashuensis] Length = 167 Score = 140 bits (354), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 77/167 (46%), Positives = 99/167 (59%), Gaps = 1/167 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPCIVTQVRTNDTDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVEIRT-ADASEYTLGQELTAEVFEAGVKVDVTGKSKGKGFAGVMKRHNFRGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 A HG HRS GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTV 166 >gi|302036665|ref|YP_003796987.1| 50S ribosomal protein L3 [Candidatus Nitrospira defluvii] gi|300604729|emb|CBK41061.1| 50S ribosomal protein L3 [Candidatus Nitrospira defluvii] Length = 206 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 87/212 (41%), Positives = 120/212 (56%), Gaps = 6/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M +G++ +KLGMT VY+ E PVTV+ C+VV +T +++GY AVQ+ GE K + Sbjct: 1 MTNGLLGKKLGMTQVYD-ESVLAPVTVIEAGPCRVVSVKTKERDGYEAVQLSFGEVKEQR 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +S+ G +P + L EF D + VG F G VDV G++ GKGF Sbjct: 60 LSRGELGHLKKHQAAPSRWLREFPKVGD---VTVGQTVKVDMFKKGDWVDVVGVSKGKGF 116 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G ++RHN+ G THG S+ HR+ GS G P RV+KNK + G MG RVTV+ L+VV Sbjct: 117 QGVVRRHNYAGGPETHG-SMFHRAPGSIGASSYPSRVWKNKALPGHMGDERVTVQRLKVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 L+ V+G VPG N ++VR S KS Sbjct: 176 DARPDENLLFVRGAVPGG-VNGLLIVRKSKKS 206 >gi|294674771|ref|YP_003575387.1| 50S ribosomal protein L3 [Prevotella ruminicola 23] gi|294472870|gb|ADE82259.1| ribosomal protein L3 [Prevotella ruminicola 23] Length = 204 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 84/203 (41%), Positives = 121/203 (59%), Gaps = 4/203 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V++ +G+ +P TV+ C V ++++K+GY AVQ+ GE K KN +K Sbjct: 3 GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKSVEKDGYEAVQLAFGEKKEKNTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 M G F N +PK L EF+ D L +G + F + VDV G + GKGF G Sbjct: 63 AMMGIFKKANTTPKAHLAEFKF---DTELNLGDTVTVDIFEGAEFVDVVGTSKGKGFQGV 119 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ +ATHG R GS G P +VFK +M G+MGG+RVT +NL+V+ V Sbjct: 120 VKRHGFGGVGQATHGQDDRLRKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLKVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205 + LILVKG G ++ ++ Sbjct: 180 IPEHNLILVKGSCAGYNGSTVLI 202 >gi|229815775|ref|ZP_04446100.1| hypothetical protein COLINT_02824 [Collinsella intestinalis DSM 13280] gi|229808691|gb|EEP44468.1| hypothetical protein COLINT_02824 [Collinsella intestinalis DSM 13280] Length = 206 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 89/203 (43%), Positives = 118/203 (58%), Gaps = 3/203 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RK+GMT V++ + +PVTV+ C V +T +GY AVQ+G G+ K K+V+KP Sbjct: 5 ILGRKIGMTQVWDEDDNVVPVTVIQAGPCTVSQVKTEATDGYNAVQIGFGDIKSKHVNKP 64 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M G F+ V P + L E RV+ ++ VG V + + F VDV G + GKGF G + Sbjct: 65 MAGHFAKAGVEPVRYLREVRVENGEE-HKVGDVVTVADFENVAKVDVIGTSKGKGFQGRI 123 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR N THG I R GS G P RV K KMAG MG RVTVKNL VV +D Sbjct: 124 KRWNQRRGPMTHGSHI-QRHPGSIGQCAYPARVLKGVKMAGHMGNARVTVKNLSVVRIDA 182 Query: 185 KRGLILVKGCVPGAKKNSWILVR 207 ++ L+LVKG VPG KN + +R Sbjct: 183 EQNLMLVKGAVPGG-KNGLVAIR 204 >gi|225158913|ref|ZP_03725227.1| ribosomal protein L3 [Opitutaceae bacterium TAV2] gi|224802531|gb|EEG20789.1| ribosomal protein L3 [Opitutaceae bacterium TAV2] Length = 215 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 83/212 (39%), Positives = 123/212 (58%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M S ++ +K+GMT VY+ + +PVTV+ C VV +T + +GY AVQ+G K KN Sbjct: 1 MISTLLGKKIGMTQVYDAQNVLVPVTVVEAGPCPVVQVKTTETDGYNAVQLGFSVKKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLF-EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 K + + + ++ E R+ + L G V + + F GQ+VDV G+T GKG Sbjct: 61 TPKAEQAHAAKAGLENTPRVLGEVRL-NEAPTLKAGDVVTVAAFKEGQIVDVIGITKGKG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G ++R G A+HG S+ HR GS G RQ PGR +KN+KM G MG + TV+NL + Sbjct: 120 FQGVVRRFRVAGGPASHG-SMFHRRIGSIGMRQTPGRSWKNQKMPGHMGSQQRTVQNLTI 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V + + L+LVKG +PGA + ++VR + K Sbjct: 179 VKILADKNLLLVKGAIPGANGDD-VIVRTAIK 209 >gi|317503980|ref|ZP_07961988.1| 50S ribosomal protein L3 [Prevotella salivae DSM 15606] gi|315665006|gb|EFV04665.1| 50S ribosomal protein L3 [Prevotella salivae DSM 15606] Length = 204 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 83/205 (40%), Positives = 124/205 (60%), Gaps = 5/205 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T +K+GY A+Q+G EAK SK Sbjct: 3 GLIGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTEEKDGYKALQLGFEEAKENRTSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 PM G F +PKK L EF+ ++ +L G + F+ + VD+ G + GKGF G Sbjct: 63 PMMGTFKKAGTTPKKHLAEFKFNEEYNL---GDTLTVEIFSDAKFVDIVGTSKGKGFQGV 119 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ ++THG R GS G P +VFK +M G+MGG+RVT +NL+V+ V Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + L+LVKG V G S +L++ Sbjct: 180 IPEHNLLLVKGSVAGC-NGSTVLIK 203 >gi|158520725|ref|YP_001528595.1| ribosomal protein L3 [Desulfococcus oleovorans Hxd3] gi|226725163|sp|A8ZV57|RL3_DESOH RecName: Full=50S ribosomal protein L3 gi|158509551|gb|ABW66518.1| ribosomal protein L3 [Desulfococcus oleovorans Hxd3] Length = 208 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 78/207 (37%), Positives = 117/207 (56%), Gaps = 3/207 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V++ +G +PVTV+ C V +T++ +GY A+Q+G E K Sbjct: 1 MCRGIIGRKIGMTGVFSDQGEYVPVTVIEAGPCVVTQIKTVETDGYSALQLGFLEKKASK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+ G F + E V D +G V + F+ G+ V V G+ G+GF Sbjct: 61 INKPLAGHFKKSGGVGFAYVREMAVD-DPSAYTLGQVINAELFSAGEKVHVAGLMKGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH F G + THG SHR GS G P +VFK +K+ GR G R+T KNL++ Sbjct: 120 AGVVKRHGFAGGKDTHGCH-SHRVPGSIGTSAWPSKVFKGRKLPGRYGNTRITTKNLKIF 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207 + + LIL+KG VPG+ N + +R Sbjct: 179 DIQPETNLILIKGAVPGS-NNGLVEIR 204 >gi|325280968|ref|YP_004253510.1| 50S ribosomal protein L3 [Odoribacter splanchnicus DSM 20712] gi|324312777|gb|ADY33330.1| 50S ribosomal protein L3 [Odoribacter splanchnicus DSM 20712] Length = 207 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 87/205 (42%), Positives = 128/205 (62%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V+++EG+ IP TV+ C V +T++K+GY A+Q+G E K K+ +K Sbjct: 5 GLIGKKVGMTSVFSVEGKSIPCTVIECGPCVVTQVKTIEKDGYEALQLGFDEKKEKHTTK 64 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 + G F +PK+KL EF ++ L G V + VD+ G + GKG+ G Sbjct: 65 QLSGHFKKAGTTPKRKLVEFAGFAEEHKL--GDVIDVTILEGTAYVDIVGTSKGKGYQGV 122 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ +ATHG R GS G P RVFK +M GRMGG+RVTV+NLEV+ V Sbjct: 123 VKRHGFGGVGQATHGQHNRLRKPGSIGACSTPARVFKGMRMGGRMGGDRVTVENLEVLKV 182 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + L+LVKG VPG+ K S+++++ Sbjct: 183 IPENNLLLVKGSVPGS-KGSYVIIQ 206 >gi|33241161|ref|NP_876103.1| 50S ribosomal protein L3 [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|42559600|sp|Q7V9W2|RL3_PROMA RecName: Full=50S ribosomal protein L3 gi|33238691|gb|AAQ00756.1| Ribosomal protein L3 [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 219 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 76/209 (36%), Positives = 124/209 (59%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ +GR IPVT++ C++ ++ +GY AVQ+ G + K Sbjct: 1 MSIGILGKKLGMSQFFDEKGRSIPVTLVEAGPCRITQLKSSATDGYSAVQIAFGAVREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + + + E+RV KD +G+ + F GQ VDV+G ++G+GF Sbjct: 61 INKPFQGHLAKSGDDLLRYMSEYRV-KDVGEFQLGAQITVGDFEEGQKVDVSGTSMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRH F +HG S +HR GSTG PGR++ K+MAGR GG ++T + L ++ Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLMIM 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VD + L+++KG +PG K S + +R + Sbjct: 179 KVDSDKNLLVIKGSLPG-KPGSLLNIRPA 206 >gi|238810297|dbj|BAH70087.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 276 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 82/217 (37%), Positives = 122/217 (56%), Gaps = 6/217 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ G +PVTV+ + V + DKNGY+A Q+ GE K Sbjct: 1 MMKGILGRKIGMTQIFTELGASVPVTVIEVQPNVVTKVLSADKNGYVATQIAVGEKKEHR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP++G F+ +PK+ + E R + +L G + F G+LVD+TG + GKGF Sbjct: 61 SNKPLKGQFAQAKTTPKRYVKEIRGMQGYEL---GQTIKANIFKAGELVDITGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLE 178 +G +KR N +HG + TG D RVFK M G +G R TV+NLE Sbjct: 118 AGTIKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVFKGMTMPGHLGAVRTTVQNLE 177 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +V VD ++LVKG +PGA KNS++++R++ K N Sbjct: 178 IVKVDVANNIMLVKGSIPGA-KNSYVMIREAVKGLPN 213 >gi|240145878|ref|ZP_04744479.1| 50S ribosomal protein L3 [Roseburia intestinalis L1-82] gi|257202027|gb|EEV00312.1| 50S ribosomal protein L3 [Roseburia intestinalis L1-82] gi|291535430|emb|CBL08542.1| LSU ribosomal protein L3P [Roseburia intestinalis M50/1] gi|291537926|emb|CBL11037.1| LSU ribosomal protein L3P [Roseburia intestinalis XB6B4] Length = 227 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 90/230 (39%), Positives = 124/230 (53%), Gaps = 23/230 (10%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G +PVTVL C V +T++ +GY AVQV + K K Sbjct: 1 MKKAILATKVGMTQIFNADGVLVPVTVLEAGPCSVTQIKTVENDGYSAVQVAYADKKEKV 60 Query: 61 VSK----------------PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 VSK G F+ VS K+ + EF+ + D+ +G V F Sbjct: 61 VSKDANGKKEIRNRHGVNKAQMGHFAKAGVSGKRYVREFKFENADEY-KLGDVIKADIFA 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRA--THGVSISHRSHGSTGCRQDPGRVFKNKK 162 G +D T ++ GKGF GA+KR G R HG S HR GS G P RVFK K Sbjct: 120 EGDKIDATAISKGKGFQGAIKR--LGQHRGPMAHG-SKFHRHQGSNGACSSPSRVFKGKG 176 Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 M G MG +VT +NLEVV VD + L+LVKG VPGAKK + ++++ K+ Sbjct: 177 MPGHMGSVKVTTQNLEVVRVDAENNLLLVKGAVPGAKK-CMVTIKETVKA 225 >gi|37912950|gb|AAR05282.1| ribosomal protein L3 [uncultured marine gamma proteobacterium EB000-45B06] gi|40063177|gb|AAR38014.1| ribosomal protein L3 [uncultured marine bacterium 562] Length = 211 Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 81/198 (40%), Positives = 120/198 (60%), Gaps = 3/198 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K GMT ++ +G IPVT + + + +T ++GY A V + K N Sbjct: 1 MSIGLIGKKSGMTRLFLEDGESIPVTAVSVCGNFLADIKTTSRDGYNAFVV-SKVNKSNN 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K F+ +N+ P L EFR + D + VG + F +GQ VDVTG + GKG Sbjct: 60 VNKSKSEFYKKINLDPGI-LAEFRSGDEVADDMKVGKHLTADIFEIGQYVDVTGTSKGKG 118 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KRHNF ATHG S+SHR+HGS G Q PGRV+K KKM+G MG + TV++L++ Sbjct: 119 YAGVIKRHNFAMQDATHGNSLSHRAHGSIGQCQTPGRVWKGKKMSGHMGNVQKTVQSLKI 178 Query: 180 VSVDDKRGLILVKGCVPG 197 V +D + ++ +KG VPG Sbjct: 179 VDLDVENSVLYIKGAVPG 196 >gi|238922830|ref|YP_002936343.1| 50S ribosomal protein L3 [Eubacterium rectale ATCC 33656] gi|259646545|sp|C4ZBD4|RL3_EUBR3 RecName: Full=50S ribosomal protein L3 gi|238874502|gb|ACR74209.1| 50S ribosomal protein L3 [Eubacterium rectale ATCC 33656] gi|291523732|emb|CBK89319.1| LSU ribosomal protein L3P [Eubacterium rectale DSM 17629] gi|291528802|emb|CBK94388.1| LSU ribosomal protein L3P [Eubacterium rectale M104/1] Length = 227 Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 92/230 (40%), Positives = 125/230 (54%), Gaps = 23/230 (10%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK- 59 M+ ++A K+GMT ++N +G +PVTVL C V +T++ +GY AVQVG G+ K K Sbjct: 1 MKKAILATKIGMTQIFNADGVLVPVTVLEAGPCVVTQIKTVENDGYSAVQVGFGDKKEKV 60 Query: 60 ---------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V+K G F VS K+ + EF+ + D+ + F Sbjct: 61 VEKDANGKKSVAHRHGVNKAQMGHFKKAGVSGKRFVREFKFENADEY-NLADEIKADIFA 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRA--THGVSISHRSHGSTGCRQDPGRVFKNKK 162 G VDVT ++ GKGF GA+KR G R HG S HR GS G P +VFK K Sbjct: 120 EGDKVDVTAISKGKGFQGAIKR--LGQHRGPMAHG-SKFHRHQGSNGACSSPSKVFKGKG 176 Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 M G MG +VT +NLEVV VD + L+L+KG VPGAKK + I V+++ KS Sbjct: 177 MPGHMGSVKVTTQNLEVVRVDADKNLLLIKGAVPGAKK-ALITVKETTKS 225 >gi|73748316|ref|YP_307555.1| 50S ribosomal protein L3 [Dehalococcoides sp. CBDB1] gi|147669096|ref|YP_001213914.1| 50S ribosomal protein L3 [Dehalococcoides sp. BAV1] gi|289432364|ref|YP_003462237.1| 50S ribosomal protein L3 [Dehalococcoides sp. GT] gi|109893426|sp|Q3ZZM4|RL3_DEHSC RecName: Full=50S ribosomal protein L3 gi|189042842|sp|A5FRY9|RL3_DEHSB RecName: Full=50S ribosomal protein L3 gi|73660032|emb|CAI82639.1| ribosomal protein L3 [Dehalococcoides sp. CBDB1] gi|146270044|gb|ABQ17036.1| LSU ribosomal protein L3P [Dehalococcoides sp. BAV1] gi|288946084|gb|ADC73781.1| 50S ribosomal protein L3 [Dehalococcoides sp. GT] Length = 205 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 84/218 (38%), Positives = 128/218 (58%), Gaps = 20/218 (9%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--V 58 M G++ +K+GMT ++ +G+ PVT++ C VV +T ++GY AVQ+G G+AK Sbjct: 1 MIQGIIGKKIGMTQIFQEDGKAQPVTLVEAGPCVVVQVKTEKQDGYEAVQLGYGKAKHIT 60 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKD---DDL--LPVGSVFSPSYFTVGQLVDVTG 113 V RGF EF+V ++ DD+ + VG + S F G+ +D +G Sbjct: 61 SAVKGQCRGFG------------EFKVLREVDVDDIAAVSVGDQITVSDFKDGEKIDASG 108 Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 ++ G+GFSG +KR +F G THG S HR+ GS G PGR++K K MAG MG VT Sbjct: 109 VSRGRGFSGVVKRWHFAGGPKTHGQSDRHRAPGSIGSTTTPGRIYKGKHMAGHMGNEAVT 168 Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 ++NL V+ D ++ L++VKG +PG KN+ IL++ + K Sbjct: 169 IRNLVVLKTDAEKNLLMVKGAIPGG-KNTIILIKKTGK 205 >gi|286142800|gb|ADC41430.1| ribosomal protein L3 [Streptomyces cinnamoneus] Length = 167 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 77/167 (46%), Positives = 100/167 (59%), Gaps = 1/167 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDIDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVELRTA-DASEYTLGQEITAAVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 A HG HRS GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTV 166 >gi|91200667|emb|CAJ73718.1| strongly similar to 50S ribosomal protein L3 [Candidatus Kuenenia stuttgartiensis] Length = 196 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 79/196 (40%), Positives = 118/196 (60%), Gaps = 3/196 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT +Y EG +PVT++ C V+ +TL +GY AVQ+G + K+K +P G + Sbjct: 1 MTQIYTGEGALVPVTLIKAGPCNVLQVKTLGNDGYSAVQLGYKDKKIKRAKRPEIGHAAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 ++ P + + E ++ D+ +G + F +LVDV G++ GKGF+G MKR G Sbjct: 61 ASLLPGRFVKEVKLDTVSDI-HLGQAVTLDIFEDVKLVDVIGISKGKGFAGVMKRWGMKG 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 THG S HRS GS G DPGRV + KKM G++G RVT+KNL+VV VD ++ ++ V Sbjct: 120 GPQTHG-STRHRSVGSVGAGTDPGRVIRGKKMPGQLGRERVTIKNLDVVKVDKEKNMLFV 178 Query: 192 KGCVPGAKKNSWILVR 207 KG VPG K S+++++ Sbjct: 179 KGAVPGY-KGSYLIIK 193 >gi|256420659|ref|YP_003121312.1| ribosomal protein L3 [Chitinophaga pinensis DSM 2588] gi|256035567|gb|ACU59111.1| ribosomal protein L3 [Chitinophaga pinensis DSM 2588] Length = 205 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 78/205 (38%), Positives = 116/205 (56%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT +++ GR+ VT++ C V +T++ +GY A+QV GE K KN K Sbjct: 3 GIIGKKIGMTSIFDQNGRQTAVTIIEAGPCVVTQVKTVETDGYNAIQVSFGEKKEKNTPK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 F+ + SPK+ + EFR D +G + F G+ +DV G + GKGF G Sbjct: 63 AELNHFAKASTSPKRFVKEFR--NPDVQKALGETITTEIFAEGETIDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH F G+ ATHG R+ GS G P RVFK +MAG+ G +V VK L++V + Sbjct: 121 VKRHGFSGVGEATHGQHDRSRAPGSVGGSSYPSRVFKGMRMAGQTGNEQVKVKGLKIVKI 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 ++ ILV G VPG S +L++ Sbjct: 181 FAEKNYILVSGSVPG-HNGSIVLIQ 204 >gi|291334061|gb|ADD93734.1| 50S ribosomal protein L3 [uncultured marine bacterium MedDCM-OCT-S05-C114] Length = 215 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 88/218 (40%), Positives = 130/218 (59%), Gaps = 7/218 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ +KLGM+ VY+ + +PVT++ C ++ ++LDK+GY A+Q+G K K Sbjct: 1 MNLELIGKKLGMSQVYDEDNNLVPVTIVEAGPCPILQVKSLDKDGYEAIQIGF-NPKGKA 59 Query: 61 VSKPMR---GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 +KP + G S NV P+ E R+ K + GS + F+ ++VDV T G Sbjct: 60 PNKPNKCQIGKASKANVEPQHLSQEIRI-KGEHSFEQGSSLTVENFSDVKVVDVISTTKG 118 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF G +KR NFGG A+HG S+ HR GS G Q PGRVFKNKKM G G + T +NL Sbjct: 119 KGFQGVVKRWNFGGGPASHG-SMFHRRGGSYGLCQWPGRVFKNKKMPGHTGTAKRTTQNL 177 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++V + ++ L+L+KG VPG+ K + + VR + KS V+ Sbjct: 178 QLVKILPEKNLLLIKGSVPGS-KGTILTVRVAKKSKVS 214 >gi|331004121|ref|ZP_08327601.1| 50S ribosomal protein L3 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411531|gb|EGG90941.1| 50S ribosomal protein L3 [Lachnospiraceae oral taxon 107 str. F0167] Length = 225 Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 84/226 (37%), Positives = 122/226 (53%), Gaps = 18/226 (7%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ARK+GMT +++ G IPVTVL C V +T + +GY +VQV G+ + K Sbjct: 1 MKKAILARKVGMTQIFDENGVLIPVTVLLAGPCVVTQVKTEENDGYNSVQVAYGQIRTKL 60 Query: 61 VSKPMRGFFSSVNVSP--------KKKLF-------EFRVQKDDDLLPVGSVFSPSYFTV 105 V+K G + + K+++F EF+ + + P + F Sbjct: 61 VNKAKAGHLAKAGIEKVVVENGDKKREIFTAGRFIREFKFENASEYAPKAEI-KADIFAA 119 Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165 G +D T ++ GKGF GA+KRH +HG S HR GS G DP VFK K M G Sbjct: 120 GDKIDATAISKGKGFQGAIKRHGQSRGPMSHG-SKFHRHQGSNGSSSDPSHVFKGKGMPG 178 Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 MG RVT +NLE+V VD + LILVKG +PG+KK + I ++++ K Sbjct: 179 HMGAKRVTTQNLEIVRVDADKNLILVKGSMPGSKK-ALITLKETVK 223 >gi|315652354|ref|ZP_07905346.1| 50S ribosomal protein L3 [Eubacterium saburreum DSM 3986] gi|315485477|gb|EFU75867.1| 50S ribosomal protein L3 [Eubacterium saburreum DSM 3986] Length = 225 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 86/226 (38%), Positives = 122/226 (53%), Gaps = 18/226 (7%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ARK+GMT +++ G IPVTVL C V +T + +GY +VQV G+ + K Sbjct: 1 MKKAILARKVGMTQIFDENGVLIPVTVLLAGPCVVTQVKTEENDGYNSVQVAYGQIRTKL 60 Query: 61 VSKPMRGFFSSVNVSP--------KKKLF-------EFRVQKDDDLLPVGSVFSPSYFTV 105 V+K G + + K+++F EF+ + + P + F Sbjct: 61 VNKAKAGHLAKAGIEKTVVEKGDKKREVFTAGRFIREFKFENASEYAPKAEI-KVDIFAA 119 Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165 G VD T ++ GKGF GA+KRH +HG S HR GS G DP VFK K M G Sbjct: 120 GDKVDATAVSKGKGFQGAIKRHGQSRGPMSHG-SKFHRHQGSNGSSSDPSHVFKGKGMPG 178 Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 MG RVT +NLE+V VD R LILVKG +PG+KK + I ++++ K Sbjct: 179 HMGAKRVTTQNLEIVRVDADRNLILVKGSMPGSKK-ALITLKETVK 223 >gi|321310980|ref|YP_004193309.1| 50S ribosomal protein L4 [Mycoplasma haemofelis str. Langford 1] gi|319802824|emb|CBY93470.1| ribosomal protein L3 [Mycoplasma haemofelis str. Langford 1] Length = 229 Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 121/208 (58%), Gaps = 4/208 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 +V +KLGMT V++ G IPVT + ++ ++ +T++K+GY AV VG G K +SKP Sbjct: 4 IVGKKLGMTQVFSDSGTLIPVTAIEVEPNLILSLKTVEKDGYSAVVVGYGSVKETRLSKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +RG F + ++ +FE R D L + S F VG LVDV+G+T G GF+GA+ Sbjct: 64 VRGQFQKKGLEVRRNIFELRNSSQDGLKEGELLKVDSLFKVGDLVDVSGVTRGHGFTGAI 123 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQ---DPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 K NF +HG HR GS + P +V+K KKMAGR G RV+ NLE+V Sbjct: 124 KLWNFSCGPRSHGAGYPHRYQGSLETGRGGVSPQKVWKGKKMAGRYGCERVSQINLEIVY 183 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209 VD ++ L+ VKG V G + NS + ++ + Sbjct: 184 VDPEKNLLFVKGSVAG-RSNSIVRIKTT 210 >gi|116780926|gb|ABK21883.1| unknown [Picea sitchensis] Length = 303 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 81/199 (40%), Positives = 109/199 (54%), Gaps = 2/199 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGM + G+ +PVTV+ +V +T +GY AVQVG + K ++ Sbjct: 89 GVMGTKLGMMSYFEPGGKFVPVTVVGFHEGNIVTQIKTEATDGYEAVQVGYRRVRDKKLT 148 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G + V P + L EFR+ D + F G LVDV+G +IGKGF G Sbjct: 149 KPEMGHLNKVGTIPMRHLQEFRLTSVDGFELSQRLTFEELFKEGDLVDVSGKSIGKGFQG 208 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHNF +HG S SHR GS G PGRV+ KKM GRMGG + ++ L+VV + Sbjct: 209 GIKRHNFRRGPMSHG-SKSHRQLGSIGAGTTPGRVYPGKKMPGRMGGTKTKIRKLQVVKI 267 Query: 183 DDKRGLILVKGCVPGAKKN 201 D + +L+KG VPG N Sbjct: 268 DSELRTVLIKGAVPGKPGN 286 >gi|288929340|ref|ZP_06423185.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 317 str. F0108] gi|288329442|gb|EFC68028.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 317 str. F0108] Length = 204 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 82/203 (40%), Positives = 119/203 (58%), Gaps = 4/203 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V++ +G+ +P TV+ C V +T++ +GY AVQ+ GEAK +K Sbjct: 3 GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVETDGYKAVQLAYGEAKKNRTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 M G F +PKK L EF+ + +L G + F + VDV G + GKGF G Sbjct: 63 AMAGIFEKAGTTPKKHLAEFKFDTEYNL---GDTITVDLFEGAEFVDVVGTSKGKGFQGV 119 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ + THG R GS G P +VFK +M G+MGG+RVT +NL+V+ V Sbjct: 120 VKRHGFGGVGQTTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLKVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205 + LILVKG V G ++ ++ Sbjct: 180 IPEHNLILVKGSVAGCNGSTLLI 202 >gi|308190095|ref|YP_003923026.1| 50S ribosomal protein L3 [Mycoplasma fermentans JER] gi|319777391|ref|YP_004137042.1| 50S ribosomal protein l3 [Mycoplasma fermentans M64] gi|307624837|gb|ADN69142.1| 50S ribosomal protein L3 [Mycoplasma fermentans JER] gi|318038466|gb|ADV34665.1| 50S ribosomal protein L3 [Mycoplasma fermentans M64] Length = 275 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 81/214 (37%), Positives = 121/214 (56%), Gaps = 6/214 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT ++ G +PVTV+ + V + DKNGY+A Q+ GE K +K Sbjct: 3 GILGRKIGMTQIFTELGASVPVTVIEVQPNVVTKVLSADKNGYVATQIAVGEKKEHRSNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ +PK+ + E R + +L G + F G+LVD+TG + GKGF+G Sbjct: 63 PLKGQFAQAKTTPKRYVKEIRGMQGYEL---GQTIKANIFKAGELVDITGTSKGKGFAGT 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KR N +HG + TG D RVFK M G +G R TV+NLE+V Sbjct: 120 IKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVFKGMTMPGHLGAVRTTVQNLEIVK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 VD ++LVKG +PGA KNS++++R++ K N Sbjct: 180 VDVANNIMLVKGSIPGA-KNSYVMIREAVKGLPN 212 >gi|291320506|ref|YP_003515770.1| 50S ribosomal protein L3 [Mycoplasma agalactiae] gi|290752841|emb|CBH40816.1| 50S ribosomal protein L3 [Mycoplasma agalactiae] Length = 267 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 82/210 (39%), Positives = 123/210 (58%), Gaps = 6/210 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT +Y G+RIPVTV+ + V T++KNGY+A Q+ E K K V++ Sbjct: 3 GILGRKVGMTQIYTELGQRIPVTVIEVKPNVVSKVLTVEKNGYVATQLATVEKKAKRVNR 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F +PK+ + E R + +L G + S F+ G+LVD+TG++ GKGF+G Sbjct: 63 PLAGQFIQAKTTPKQYIKEIRGMEGYEL---GQEVNASIFSAGELVDITGISKGKGFAGT 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KR N +HG + TG D RV K M G +G + TV+NLE+V Sbjct: 120 IKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVVKGMTMPGHLGSEKTTVQNLEIVK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD L+LVKG +PGAKK S+++++ + K Sbjct: 180 VDTVNNLLLVKGSIPGAKK-SFVIIKQAVK 208 >gi|187251822|ref|YP_001876304.1| 50S ribosomal protein L3 [Elusimicrobium minutum Pei191] gi|186971982|gb|ACC98967.1| Ribosomal protein L3 [Elusimicrobium minutum Pei191] Length = 259 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 82/196 (41%), Positives = 111/196 (56%), Gaps = 2/196 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 V+ K+GMT +++ +G V+V+ C+VV RT +K+GY AV +G GE K K ++KP Sbjct: 32 VLGEKMGMTQLFDEKGNLHAVSVVKAGPCKVVRVRTQEKDGYTAVCLGFGEVKEKALNKP 91 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKGFSGA 123 GFF +P + + E RV D VG V S F G VDV G G+GF+GA Sbjct: 92 ELGFFKKTTQAPVRHMKEHRVS-DVTGFEVGQVVSLDKIFKPGDYVDVQGKIKGRGFAGA 150 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G A+HG S R+ G R+ G+V ++MAG G TV +EV+ VD Sbjct: 151 MKRHGFAGQPASHGASDRERAPGGLASRRSLGKVLSGQRMAGHYGNTTQTVAKIEVIKVD 210 Query: 184 DKRGLILVKGCVPGAK 199 + LI +KG VPGAK Sbjct: 211 SENNLIFLKGSVPGAK 226 >gi|215400772|ref|YP_002327533.1| ribosomal protein L3 [Vaucheria litorea] gi|194441222|gb|ACF70950.1| ribosomal protein L3 [Vaucheria litorea] Length = 196 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 76/190 (40%), Positives = 114/190 (60%), Gaps = 2/190 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V+ EG +PVTV+ + C V +T +GY A+Q+G + ++ ++K G Sbjct: 1 MTQVFYKEGLAVPVTVIRIGPCLVTKIKTTTTDGYNAIQIGYCQVPIRKLTKGQLGHLKK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 V + P K L E+ KD + VG + + + F +GQLV+++G++IGKGFSG KR+NF Sbjct: 61 VGLPPLKYLTEYNF-KDINEFYVGQILTINNFNLGQLVNISGLSIGKGFSGTCKRYNFKR 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 THG S SH++ GS G PGRVF KKM G+ G +VT+ L+++ +D + L++V Sbjct: 120 GPMTHG-SKSHKAPGSIGPGTTPGRVFPGKKMPGQHGNKKVTILKLKILGIDTEENLLVV 178 Query: 192 KGCVPGAKKN 201 KG VPG N Sbjct: 179 KGSVPGKPGN 188 >gi|261880882|ref|ZP_06007309.1| 50S ribosomal protein L3 [Prevotella bergensis DSM 17361] gi|270332389|gb|EFA43175.1| 50S ribosomal protein L3 [Prevotella bergensis DSM 17361] Length = 204 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 80/203 (39%), Positives = 121/203 (59%), Gaps = 4/203 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V++ +G+ +P TV+ C V +T++ +GY AVQ+G GEAK +K Sbjct: 3 GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVENDGYEAVQIGFGEAKKSRTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 PM G F +PKK L EF+ ++D +L G + F V+V G + GKGF G Sbjct: 63 PMAGIFKKAGTTPKKHLAEFKFEEDYNL---GDAITVELFADADFVNVVGTSKGKGFQGV 119 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH F G+ + THG R GS G P +VFK +M G+MGG+RV +NL+V+ V Sbjct: 120 VKRHGFAGVGQRTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVKTRNLKVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205 ++ L++VKG G K ++ ++ Sbjct: 180 IPEQNLLIVKGSFAGCKGSTVLI 202 >gi|224542238|ref|ZP_03682777.1| hypothetical protein CATMIT_01413 [Catenibacterium mitsuokai DSM 15897] gi|224524780|gb|EEF93885.1| hypothetical protein CATMIT_01413 [Catenibacterium mitsuokai DSM 15897] Length = 227 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 85/220 (38%), Positives = 129/220 (58%), Gaps = 12/220 (5%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ +G+ IPVTV+ V+ +T++ +GY A+QVG + + K +K Sbjct: 3 GILGRKIGMTQVFATDGKLIPVTVIEATPNVVLQKKTVETDGYNAIQVGFEDKREKLANK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLL--PVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 P +G + N +PK+ + EFR D+++ VG S F G++VDVTG + GKG+ Sbjct: 63 PEKGVVAKANTAPKRFIKEFRF---DEMMSYEVGQTVSVDSFVAGEVVDVTGTSKGKGYQ 119 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRH HG S +HR GS G P R+ K + G+MGGN TV+NLE+V+ Sbjct: 120 GVIKRHGQHIGPKGHG-SGAHRIVGSMGPIA-PNRIAPGKNLPGQMGGNTRTVQNLEIVA 177 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 VD ++ ++LV G VPG KK ++ KS + GK + Sbjct: 178 VDVEKNVLLVSGSVPGPKKGLVVV-----KSGIKANGKTN 212 >gi|328955914|ref|YP_004373247.1| LSU ribosomal protein L3P [Coriobacterium glomerans PW2] gi|328456238|gb|AEB07432.1| LSU ribosomal protein L3P [Coriobacterium glomerans PW2] Length = 206 Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 88/199 (44%), Positives = 115/199 (57%), Gaps = 2/199 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M S ++ RK+GMT V++ +PVTV+ C V +T +GY AVQ+G G+ + K+ Sbjct: 1 MVSMILGRKIGMTQVWDENDNVVPVTVIQAGPCYVSQVKTEATDGYDAVQIGFGDIRAKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++PM G F+ V P + L E RV + VG + + F + VDV G + GKGF Sbjct: 61 VNRPMAGHFAKAGVEPVRYLREVRVPAGEQH-SVGDPVTVADFEGTEKVDVIGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR THG S HR GS G P RV K KMAG MG +RVTVKNL VV Sbjct: 120 QGRIKRWGQHRGPMTHG-SHFHRHPGSIGQCAYPSRVLKGLKMAGHMGNDRVTVKNLSVV 178 Query: 181 SVDDKRGLILVKGCVPGAK 199 +D ++ LILVKG VPGAK Sbjct: 179 RIDAEQNLILVKGAVPGAK 197 >gi|156363345|ref|XP_001626005.1| predicted protein [Nematostella vectensis] gi|156212865|gb|EDO33905.1| predicted protein [Nematostella vectensis] Length = 264 Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 81/215 (37%), Positives = 123/215 (57%), Gaps = 7/215 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG----YMAVQVGA-GEA 56 R+G V KLGM+ ++ +GRR+PVT++ + +C+VV R +G +QVGA + Sbjct: 8 RTGAVGVKLGMSALWLKDGRRLPVTLIQIKDCEVVQARVAKGHGGRDPQTELQVGAVNKL 67 Query: 57 KVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116 ++ + K G F +V PK+K+ F V D L P G+ + ++F GQ V + G+T Sbjct: 68 ELNQIGKAQFGHFKRFSVRPKRKVCSFPVTPDALLTP-GTPITAAHFYPGQYVKIQGVTK 126 Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 KGF G MKR GG A+HG S +HR G+TG QDPGRV+ KKMAG MG T+ Sbjct: 127 DKGFQGVMKRWGMGGQPASHGQSKTHRKMGATGGGQDPGRVWPGKKMAGHMGNKNCTLHA 186 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 + V ++ K ++ V+G PG ++ + D++K Sbjct: 187 VRVHRINTKYNVLYVQGQCPGP-TGGFLKISDAWK 220 >gi|254495341|ref|ZP_05108265.1| 50S ribosomal protein L3 [Polaribacter sp. MED152] gi|213690665|gb|EAQ40852.2| 50S ribosomal protein L3 [Polaribacter sp. MED152] Length = 195 Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 81/197 (41%), Positives = 121/197 (61%), Gaps = 4/197 (2%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT +++ G+ IP TV+ C V RT + +GY A+Q+G + K K+ +K + G F Sbjct: 1 MTSLFDENGKNIPCTVIEAGPCVVTQVRTEEVDGYNALQLGFDDKKAKSSNKALDGHFKK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 + KKK+ EF Q ++ +G + +FT G+ VDV+G + GKGF G +KRH FGG Sbjct: 61 AGTTAKKKVVEF--QGFEEEYKLGDAITVEHFTEGEFVDVSGTSKGKGFQGVVKRHGFGG 118 Query: 132 L-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190 + +ATHG R+ GS G P RVFK +MAGRMGG +V V+NL V+ V ++ L++ Sbjct: 119 VGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGEKVKVQNLRVLKVVAEKNLLV 178 Query: 191 VKGCVPGAKKNSWILVR 207 VKG VPG KN+++ ++ Sbjct: 179 VKGAVPG-HKNAFVTIQ 194 >gi|323440070|gb|EGA97785.1| 50S ribosomal protein L3 [Staphylococcus aureus O11] Length = 209 Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 89/208 (42%), Positives = 115/208 (55%), Gaps = 11/208 (5%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG--------AGEAKVKNVSK 63 MT V+ G IPVTV+ V+ +T++ +GY A+QVG K +K Sbjct: 1 MTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYKKDAKSNKYANK 60 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G + +PK+ + EFR D D VG S F G ++DVTG++ GKGF GA Sbjct: 61 PAEGHAKKADAAPKRFIREFR-NVDVDAYEVGQEVSVDTFVAGDVIDVTGVSKGKGFQGA 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KRH +HG S HR+ GS G D RVFK +KM GRMG N VTV+NLEVV VD Sbjct: 120 IKRHGQSRGPMSHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGRNTVTVQNLEVVQVD 178 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 + +ILVKG VPG KK + +R S K Sbjct: 179 TENKVILVKGNVPGPKK-GLVEIRTSIK 205 >gi|254431244|ref|ZP_05044947.1| ribosomal protein L3 [Cyanobium sp. PCC 7001] gi|197625697|gb|EDY38256.1| ribosomal protein L3 [Cyanobium sp. PCC 7001] Length = 204 Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 79/205 (38%), Positives = 119/205 (58%), Gaps = 3/205 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 M+ ++ G+ IPVTV+ C++ ++ +GY AVQ+G G+ + K V+KP +G + Sbjct: 1 MSQFFDEAGKSIPVTVIEAGPCRITQIKSTGTDGYNAVQLGFGDIREKLVNKPAQGHLAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 + L E+RV D L +G + + F GQ VDV+G T+G+GF+G KRH F Sbjct: 61 SGEELLRHLKEYRVDSLDGL-ELGGAVTVAAFEPGQKVDVSGDTMGRGFAGYQKRHGFSR 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 THG S +HR GSTG PGRV+ K+MAGR GG + T + L ++ VD +R L++V Sbjct: 120 GPMTHG-SKNHREPGSTGAGTTPGRVYPGKRMAGRYGGKQTTTRGLVILKVDTERNLLVV 178 Query: 192 KGCVPGAKKNSWILVRDSFKSAVNC 216 KG VPG K + + +R + + N Sbjct: 179 KGSVPG-KPGALLNIRPANRVGANA 202 >gi|189460684|ref|ZP_03009469.1| hypothetical protein BACCOP_01331 [Bacteroides coprocola DSM 17136] gi|189432643|gb|EDV01628.1| hypothetical protein BACCOP_01331 [Bacteroides coprocola DSM 17136] Length = 205 Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 82/205 (40%), Positives = 124/205 (60%), Gaps = 3/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V ++++K+GY AVQVG + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQVGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PK+ L EF+ ++ L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKRHLAEFKDFSEE--LNLGDTITVELFNDASYVDVIGTSKGKGFQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ + THG R GS G P +VFK +M G+MGG+RVT NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTHNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + L+L+KG VPG K + I+ + Sbjct: 181 IPEHNLLLIKGSVPGCKGSIVIIEK 205 >gi|286142684|gb|ADC41372.1| ribosomal protein L3 [Streptomyces californicus] gi|286142700|gb|ADC41380.1| ribosomal protein L3 [Streptomyces vinaceus] gi|286142714|gb|ADC41387.1| ribosomal protein L3 [Streptomyces floridae] gi|286142746|gb|ADC41403.1| ribosomal protein L3 [Streptomyces sp. CB157] gi|286142798|gb|ADC41429.1| ribosomal protein L3 [Streptomyces puniceus] Length = 167 Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 75/167 (44%), Positives = 100/167 (59%), Gaps = 1/167 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + + F G VDVTG + GKGF+G MKRHNF G Sbjct: 61 DVTPRRHLVELRT-PDASEYTLGQEVTAAVFESGVKVDVTGKSKGKGFAGVMKRHNFKGG 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 +A+HG HR GS G PGRVFK +MAGRMG RVT +NL + Sbjct: 120 KASHGAHRVHRMPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTI 166 >gi|297582450|ref|YP_003698230.1| 50S ribosomal protein L3 [Bacillus selenitireducens MLS10] gi|297140907|gb|ADH97664.1| 50S ribosomal protein L3 [Bacillus selenitireducens MLS10] Length = 208 Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 82/212 (38%), Positives = 119/212 (56%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT +++ G ++PVTV+ V+ +T + GY A+Q+G + K Sbjct: 1 MTKGILGKKLGMTQIFSENGEQVPVTVIEASPNVVLQKKTAEGEGYEAIQIGYDDKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + P +G +PK+ + E R D +G F G +DVTG + GKGF Sbjct: 61 QNSPEKGHAEKAKTAPKRFVKEIRDVNTADY-EIGQEIKVDIFAEGDAIDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRHN +HG S HR GS G DP V K + G+MGG VT++NLEVV Sbjct: 120 QGAIKRHNQSRGPMSHG-SRYHRRPGSMGPV-DPNHVRPGKLLPGQMGGETVTIQNLEVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R +ILVKG VPGA+K S++ + + K+ Sbjct: 178 KVDTERNVILVKGNVPGARK-SFVTITSATKA 208 >gi|116748990|ref|YP_845677.1| 50S ribosomal protein L3 [Syntrophobacter fumaroxidans MPOB] gi|166990941|sp|A0LIJ0|RL3_SYNFM RecName: Full=50S ribosomal protein L3 gi|116698054|gb|ABK17242.1| LSU ribosomal protein L3P [Syntrophobacter fumaroxidans MPOB] Length = 210 Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M +V RKL M+ ++ +G +P+T++ C V +T +++GY A+Q+G G K KN Sbjct: 1 MIKAIVGRKLQMSQIFAEDGTAVPITLIQAGPCTVTQVKTPERDGYSALQIGFGSRKPKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+G V + L E R++ D VG + F +G+ +DV G T GKG+ Sbjct: 61 VNKPMKGHLDKVGKGYFEVLREIRMENASD-HEVGEDLAADVFEIGERIDVIGTTKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR F + HG S + R GSTG PGRV K KKM G+ G R TV NL ++ Sbjct: 120 AGTIKRWGFQRGPSGHG-SKNIREPGSTGNATFPGRVIKGKKMPGQKGNKRTTVMNLRII 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V + L++VKG VPG+ +N +L+R + ++ Sbjct: 179 DVRPEENLLIVKGAVPGS-QNGIVLIRKTNRA 209 >gi|260909750|ref|ZP_05916444.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 472 str. F0295] gi|260636175|gb|EEX54171.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 472 str. F0295] Length = 204 Score = 138 bits (347), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 82/203 (40%), Positives = 119/203 (58%), Gaps = 4/203 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V++ +G+ +P TV+ C V +T++ +GY AVQ+ GEAK +K Sbjct: 3 GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVETDGYNAVQLAYGEAKKNRTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 M G F +PKK L EF+ + +L G + F + VDV G + GKGF G Sbjct: 63 AMAGIFDKAGTTPKKHLAEFKFDTEYNL---GDTITVDLFEGAEFVDVVGTSKGKGFQGV 119 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ + THG R GS G P +VFK +M G+MGG+RVT +NL+V+ V Sbjct: 120 VKRHGFGGVGQTTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLKVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205 + LILVKG V G ++ ++ Sbjct: 180 IPEHNLILVKGSVAGCNGSTLLI 202 >gi|286142596|gb|ADC41328.1| ribosomal protein L3 [Streptomyces limosus] gi|286142598|gb|ADC41329.1| ribosomal protein L3 [Streptomyces limosus] gi|286142718|gb|ADC41389.1| ribosomal protein L3 [Streptomyces limosus] gi|286142722|gb|ADC41391.1| ribosomal protein L3 [Streptomyces limosus] gi|286142724|gb|ADC41392.1| ribosomal protein L3 [Streptomyces limosus] gi|286142728|gb|ADC41394.1| ribosomal protein L3 [Streptomyces limosus] gi|286142732|gb|ADC41396.1| ribosomal protein L3 [Streptomyces limosus] gi|286142734|gb|ADC41397.1| ribosomal protein L3 [Streptomyces limosus] gi|286142736|gb|ADC41398.1| ribosomal protein L3 [Streptomyces limosus] gi|286142738|gb|ADC41399.1| ribosomal protein L3 [Streptomyces limosus] gi|286142740|gb|ADC41400.1| ribosomal protein L3 [Streptomyces limosus] gi|286142758|gb|ADC41409.1| ribosomal protein L3 [Streptomyces limosus] gi|286142766|gb|ADC41413.1| ribosomal protein L3 [Streptomyces limosus] gi|286142768|gb|ADC41414.1| ribosomal protein L3 [Streptomyces limosus] gi|286142782|gb|ADC41421.1| ribosomal protein L3 [Streptomyces griseus] gi|286142786|gb|ADC41423.1| ribosomal protein L3 [Streptomyces limosus] gi|286142788|gb|ADC41424.1| ribosomal protein L3 [Streptomyces limosus] gi|286142792|gb|ADC41426.1| ribosomal protein L3 [Streptomyces limosus] gi|286142794|gb|ADC41427.1| ribosomal protein L3 [Streptomyces griseus] Length = 167 Score = 138 bits (347), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 77/167 (46%), Positives = 98/167 (58%), Gaps = 1/167 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ V RT D +GY AVQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGANVVTQVRTNDTDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVEIRTA-DASEYTLGQELNADTFEAGLKVDVTGKSKGKGFAGVMKRHNFKGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 A HG HRS GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTV 166 >gi|291460718|ref|ZP_06600108.1| 50S ribosomal protein L3 [Oribacterium sp. oral taxon 078 str. F0262] gi|291416677|gb|EFE90396.1| 50S ribosomal protein L3 [Oribacterium sp. oral taxon 078 str. F0262] Length = 209 Score = 137 bits (346), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 82/212 (38%), Positives = 120/212 (56%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT +++ G IPVTVL C V +TL+ +GY AVQVG + + + Sbjct: 1 MKKAILAIKVGMTQIWDENGILIPVTVLQAGPCVVTQVKTLENDGYKAVQVGFQDKRERL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++P +G F V K+ + EFR + ++ P + + F G VDVT ++ GKGF Sbjct: 61 VNRPEKGQFDKAGVPCKRFVREFRFENSEEYKPKDEIKA-DIFAAGDKVDVTAVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 A++++ HG S HR GS G P RV K M MG RVT +NL VV Sbjct: 120 QSAIRKYGQHRGPMAHG-SKFHRHQGSNGTSATPSRVLPGKGMPSHMGAVRVTTQNLSVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + GLIL+KG VPG KK + + V+++ K+ Sbjct: 179 RVDAENGLILIKGAVPGPKK-ALVTVKEAVKA 209 >gi|148377809|ref|YP_001256685.1| 50S ribosomal protein L3 [Mycoplasma agalactiae PG2] gi|226730538|sp|A5IYY6|RL3_MYCAP RecName: Full=50S ribosomal protein L3 gi|148291855|emb|CAL59245.1| 50S ribosomal protein L3 [Mycoplasma agalactiae PG2] Length = 267 Score = 137 bits (346), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 82/210 (39%), Positives = 122/210 (58%), Gaps = 6/210 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT +Y G+RIPVTV+ + V T++KNGY A Q+ E K K V++ Sbjct: 3 GILGRKVGMTQIYTELGQRIPVTVVEVKPNVVSKVLTVEKNGYFATQLATVEKKAKRVNR 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F +PK+ + E R + +L G + S F+ G+LVD+TG++ GKGF+G Sbjct: 63 PLAGQFIQAKTTPKQYIKEIRGMEGYEL---GQEVNASIFSAGELVDITGISKGKGFAGT 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KR N +HG + TG D RV K M G +G + TV+NLE+V Sbjct: 120 IKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVVKGMTMPGHLGSEKTTVQNLEIVK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD L+LVKG +PGAKK S+++++ + K Sbjct: 180 VDTVNNLLLVKGSIPGAKK-SFVIIKQAVK 208 >gi|224023618|ref|ZP_03641984.1| hypothetical protein BACCOPRO_00325 [Bacteroides coprophilus DSM 18228] gi|224016840|gb|EEF74852.1| hypothetical protein BACCOPRO_00325 [Bacteroides coprophilus DSM 18228] Length = 205 Score = 137 bits (346), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 82/205 (40%), Positives = 124/205 (60%), Gaps = 3/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V ++++K+GY AVQVG + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQVGFQDMKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PK+ L EF+ ++ L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKRHLAEFKDFSEE--LNLGDTITVELFNDANYVDVIGTSKGKGFQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ + THG R GS G P +VFK +M G+MGG+RVT NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTHNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + L+L+KG VPG K + I+ + Sbjct: 181 IPEHNLLLIKGSVPGYKGSIVIIEK 205 >gi|325108615|ref|YP_004269683.1| 50S ribosomal protein L3P [Planctomyces brasiliensis DSM 5305] gi|324968883|gb|ADY59661.1| LSU ribosomal protein L3P [Planctomyces brasiliensis DSM 5305] Length = 231 Score = 137 bits (346), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 89/230 (38%), Positives = 125/230 (54%), Gaps = 20/230 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT VY G +PVTVL + C V+ RTLD++GY AVQ+G G+ + Sbjct: 1 MPVGLLGRKVGMTQVYEEGGVVVPVTVLEVGPCPVLQVRTLDRDGYEAVQLGFGDKPRRL 60 Query: 61 VSKPMRG-------------------FFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS 101 ++ RG + + P++ + EFR + + VG V + Sbjct: 61 ATRGERGHVAEISSKRRKARQEAGVELLAKADCEPQRYVREFRTDGESLDIEVGKVLTVE 120 Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F VDV + G+G +G MKRHNF G RA+HGV HR+ GS G DP RV K Sbjct: 121 QFAEISNVDVVATSKGRGTAGVMKRHNFAGQRASHGVKKVHRAPGSIGQSADPSRVLKGT 180 Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +MAG+ G RVTV+NL+V + + L+LVKG VPG ++LVR + K Sbjct: 181 RMAGQYGNARVTVRNLKVARIVAEENLLLVKGAVPGP-SGGYVLVRPTNK 229 >gi|57234686|ref|YP_181218.1| 50S ribosomal protein L3 [Dehalococcoides ethenogenes 195] gi|109893425|sp|Q3Z981|RL3_DEHE1 RecName: Full=50S ribosomal protein L3 gi|57225134|gb|AAW40191.1| ribosomal protein L3 [Dehalococcoides ethenogenes 195] Length = 205 Score = 137 bits (346), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 82/218 (37%), Positives = 129/218 (59%), Gaps = 20/218 (9%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--V 58 M G++ +K+GMT ++ +G+ PVT++ C VV +T ++GY AVQ+G G+AK Sbjct: 1 MIQGIIGKKIGMTQIFQEDGKAQPVTLVEAGPCVVVQVKTEKQDGYEAVQLGYGKAKHIT 60 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKD---DDL--LPVGSVFSPSYFTVGQLVDVTG 113 V RGF EF+V ++ DD+ + VG + S F G+ +D +G Sbjct: 61 SAVKGQCRGFG------------EFKVLREVDVDDIAAVNVGDQITVSDFKDGEKIDASG 108 Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 ++ G+GF+G +KR +F G THG S HR+ GS PGR++K K+MAG MG + VT Sbjct: 109 VSRGRGFAGVVKRWHFAGGPKTHGQSDRHRAPGSISSTTTPGRIYKGKRMAGHMGNDAVT 168 Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 ++NL V+ D ++ L++VKG +PG KN+ IL++ + K Sbjct: 169 IRNLVVLKTDAEKNLLMVKGAIPGG-KNTIILIKKTGK 205 >gi|302822169|ref|XP_002992744.1| hypothetical protein SELMODRAFT_430901 [Selaginella moellendorffii] gi|300139485|gb|EFJ06225.1| hypothetical protein SELMODRAFT_430901 [Selaginella moellendorffii] Length = 222 Score = 137 bits (346), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 81/199 (40%), Positives = 110/199 (55%), Gaps = 2/199 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ K+GM + +GR IPVTV+ +V +T +GY AVQVG + ++ Sbjct: 8 GVMGTKVGMMTHFMPDGRAIPVTVIGFHEGNIVTQVKTEPTDGYNAVQVGYLRVRDTKLT 67 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G + + P + L EFR+ D + F VG LVDV+G +IGKGF G Sbjct: 68 KPELGHLNKIGTIPMRHLQEFRLVSVDGFELSQRLNVEDIFKVGDLVDVSGKSIGKGFQG 127 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHNF THG S SHR GS G PGRV+ KKM GRMG + ++ LE++ + Sbjct: 128 GIKRHNFKRGPMTHG-SKSHRQLGSIGAGTTPGRVYPGKKMPGRMGFQKTKIRKLEIIKI 186 Query: 183 DDKRGLILVKGCVPGAKKN 201 D + +LVKG VPG + N Sbjct: 187 DPELRAVLVKGAVPGKRGN 205 >gi|270307842|ref|YP_003329900.1| ribosomal protein L3 [Dehalococcoides sp. VS] gi|270153734|gb|ACZ61572.1| ribosomal protein L3 [Dehalococcoides sp. VS] Length = 205 Score = 137 bits (346), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 82/218 (37%), Positives = 129/218 (59%), Gaps = 20/218 (9%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--V 58 M G++ +K+GMT ++ +G+ PVT++ C VV +T ++GY AVQ+G G+AK Sbjct: 1 MIQGIIGKKIGMTQIFQEDGKAQPVTLVEAGPCVVVQVKTEKQDGYEAVQLGYGKAKHIT 60 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKD---DDL--LPVGSVFSPSYFTVGQLVDVTG 113 V RGF EF+V ++ DD+ + VG + S F G+ +D +G Sbjct: 61 SAVKGQCRGFG------------EFKVLREVDVDDIATVNVGDQITVSDFKDGEKIDASG 108 Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 ++ G+GF+G +KR +F G THG S HR+ GS PGR++K K+MAG MG + VT Sbjct: 109 VSRGRGFAGVVKRWHFAGGPKTHGQSDRHRAPGSISSTTTPGRIYKGKRMAGHMGNDAVT 168 Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 ++NL V+ D ++ L++VKG +PG KN+ IL++ + K Sbjct: 169 IRNLVVLKTDAEKNLLMVKGAIPGG-KNTIILIKKTGK 205 >gi|150003387|ref|YP_001298131.1| 50S ribosomal protein L3 [Bacteroides vulgatus ATCC 8482] gi|212695305|ref|ZP_03303433.1| hypothetical protein BACDOR_04845 [Bacteroides dorei DSM 17855] gi|237711673|ref|ZP_04542154.1| 50S ribosomal protein L3 [Bacteroides sp. 9_1_42FAA] gi|237725885|ref|ZP_04556366.1| 50S ribosomal protein L3 [Bacteroides sp. D4] gi|254881322|ref|ZP_05254032.1| 50S ribosomal protein L3 [Bacteroides sp. 4_3_47FAA] gi|265753093|ref|ZP_06088662.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_33FAA] gi|294777821|ref|ZP_06743265.1| 50S ribosomal protein L3 [Bacteroides vulgatus PC510] gi|319640324|ref|ZP_07995049.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_40A] gi|166233118|sp|A6KYJ5|RL3_BACV8 RecName: Full=50S ribosomal protein L3 gi|149931811|gb|ABR38509.1| 50S ribosomal protein L3 [Bacteroides vulgatus ATCC 8482] gi|212662215|gb|EEB22789.1| hypothetical protein BACDOR_04845 [Bacteroides dorei DSM 17855] gi|229435693|gb|EEO45770.1| 50S ribosomal protein L3 [Bacteroides dorei 5_1_36/D4] gi|229454368|gb|EEO60089.1| 50S ribosomal protein L3 [Bacteroides sp. 9_1_42FAA] gi|254834115|gb|EET14424.1| 50S ribosomal protein L3 [Bacteroides sp. 4_3_47FAA] gi|263236279|gb|EEZ21774.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_33FAA] gi|294448275|gb|EFG16831.1| 50S ribosomal protein L3 [Bacteroides vulgatus PC510] gi|317388099|gb|EFV68953.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_40A] Length = 205 Score = 137 bits (346), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 82/205 (40%), Positives = 124/205 (60%), Gaps = 3/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V ++++K+GY AVQVG + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQVGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PK+ L EF+ + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKRHLAEFKDFETE--LNLGDTITVELFNDAAYVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ + THG R GS G P +VFK +M G+MGG+RVT NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTHNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + L+L+KG VPG K + I+ + Sbjct: 181 IPEHNLLLIKGSVPGCKGSIVIIEK 205 >gi|255085138|ref|XP_002505000.1| ribosomal protein L3, chloroplast precursor [Micromonas sp. RCC299] gi|226520269|gb|ACO66258.1| ribosomal protein L3, chloroplast precursor [Micromonas sp. RCC299] Length = 276 Score = 137 bits (345), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 85/200 (42%), Positives = 114/200 (57%), Gaps = 6/200 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62 GV K GMT ++ EG IPV+V+ + VV +T+D +GY AVQV E ++ Sbjct: 67 GVFGNKAGMTQIFTDEGLCIPVSVIAVQKGNVVTQVKTVDTDGYNAVQVAYDEVADYKIT 126 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFS 121 KP G + V+P + L EFR+ + +G PS FT G LVDV G +IGKG+ Sbjct: 127 KPEVGHCAKAGVAPMRHLEEFRLAQAP-AHELGQQLKPSEMFTAGDLVDVRGASIGKGWQ 185 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 GA+K++ F THG S SHR HGS G PGR++ KKM +MG VT + L+VV Sbjct: 186 GAVKKYGFSRGLMTHG-SKSHRQHGSVGAGTTPGRIYPGKKMHSQMGNETVTARKLKVVK 244 Query: 182 VDDKRGLILVKGCVPGAKKN 201 V+D I+VKG VPG + N Sbjct: 245 VEDD--CIIVKGSVPGKRGN 262 >gi|225376409|ref|ZP_03753630.1| hypothetical protein ROSEINA2194_02051 [Roseburia inulinivorans DSM 16841] gi|225211785|gb|EEG94139.1| hypothetical protein ROSEINA2194_02051 [Roseburia inulinivorans DSM 16841] Length = 227 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 89/230 (38%), Positives = 127/230 (55%), Gaps = 23/230 (10%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------- 52 M+ ++A K+GMT ++N +G +PVTVL C V +T++ +GY AVQV Sbjct: 1 MKKAILATKVGMTQIFNADGVLVPVTVLEAGPCSVTQIKTVENDGYSAVQVAFADKKERI 60 Query: 53 -----AGEAKVKN---VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 G+ +++N V+K G F+ VS K+ + EF+ + + +G V F Sbjct: 61 VNKDANGKKEIRNRHGVNKAQMGHFAKAGVSGKRFVKEFKFENAAEY-NLGDVIKADIFA 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRA--THGVSISHRSHGSTGCRQDPGRVFKNKK 162 G +D T ++ GKGF GA+KR FG R HG S HR GS G P RVFK K Sbjct: 120 EGDKIDATAISKGKGFQGAIKR--FGQHRGPMAHG-SKFHRHQGSNGACSSPSRVFKGKG 176 Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 M G MG +VT +NLEVV VD + L+LVKG VPGAKK + ++++ K+ Sbjct: 177 MPGHMGSVKVTTQNLEVVRVDAENNLLLVKGAVPGAKK-CLVTIKETVKA 225 >gi|108804974|ref|YP_644911.1| 50S ribosomal protein L3P [Rubrobacter xylanophilus DSM 9941] gi|123368030|sp|Q1AU29|RL3_RUBXD RecName: Full=50S ribosomal protein L3 gi|108766217|gb|ABG05099.1| LSU ribosomal protein L3P [Rubrobacter xylanophilus DSM 9941] Length = 205 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 84/209 (40%), Positives = 117/209 (55%), Gaps = 6/209 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M + V ARK MT + +G + VTVL ++ V +T +K+GY AVQVG G K Sbjct: 1 MATAVFARKKYMTQAFQDDGTAVGVTVLEVEPNVVTAVKTAEKDGYEAVQVGFGAVKSGR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++P G F+ +++ P++ L E R + VG F G V V+ + G+GF Sbjct: 61 VNRPHAGVFAKLDIPPRRYLRELRGVSGE----VGQTIGADAFEAGDRVHVSARSKGRGF 116 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH FG THG S + R GS G DP R+FK ++M G MG VTV+NLEVV Sbjct: 117 QGTVKRHGFGRGPVTHG-SHNIRQPGSVGASADPSRIFKGQRMPGHMGDRSVTVRNLEVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VD +R I V+G VPG +N+ + VR + Sbjct: 176 RVDAERNEIWVRGGVPGG-RNAIVKVRKA 203 >gi|295107591|emb|CBL05134.1| LSU ribosomal protein L3P [Gordonibacter pamelaeae 7-10-1-b] Length = 206 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 90/207 (43%), Positives = 122/207 (58%), Gaps = 3/207 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M + + +K+GMT ++ + R +PVTV+ + +V +T +GY AVQ+G G K K Sbjct: 1 MINAIYGKKIGMTQIFGEDDRVVPVTVIQAEPNKVCQVKTKATDGYEAVQMGFGAIKEKK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+G F +P + L E RV+ + VG + + F + VDVTG + GKGF Sbjct: 61 VNKPMKGHFEKQGAAPVRYLREVRVENAGEY-NVGDEQTVAAFAETKKVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR+ F G HG HR+ GS G P RVFK K+ G MG + VTVKNLEVV Sbjct: 120 AGVMKRYGFRGGPGGHGAHF-HRAPGSVGQCATPSRVFKGLKLPGHMGCDTVTVKNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207 VD+ + LILVKG VPG KN + VR Sbjct: 179 RVDEDQNLILVKGAVPGG-KNGIVRVR 204 >gi|198274003|ref|ZP_03206535.1| hypothetical protein BACPLE_00139 [Bacteroides plebeius DSM 17135] gi|198273081|gb|EDY97350.1| hypothetical protein BACPLE_00139 [Bacteroides plebeius DSM 17135] Length = 205 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 82/205 (40%), Positives = 124/205 (60%), Gaps = 3/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V ++++K+GY AVQVG + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQVGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PK+ L EF+ ++ L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKRHLAEFKDFSEE--LNLGDTITVELFNDTAYVDVIGTSKGKGFQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ + THG R GS G P +VFK +M G+MGG+RVT NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTHNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + L+L+KG VPG K + I+ + Sbjct: 181 IPEHNLLLIKGSVPGCKGSIVIIEK 205 >gi|42559212|sp|Q7XYP4|RK3_BIGNA RecName: Full=50S ribosomal protein L3, chloroplastic; Flags: Precursor gi|32307490|gb|AAP79150.1| ribosomal protein rpL3 [Bigelowiella natans] Length = 302 Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 82/201 (40%), Positives = 113/201 (56%), Gaps = 3/201 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVK 59 ++ G++ K GMT Y+ EG PVTV+ L+ VV +T + +GY AVQ+ E + + Sbjct: 87 IKMGLMGTKAGMTTYYDDEGIAHPVTVIALEAGNVVTQVKTKETDGYDAVQLAYKETRDR 146 Query: 60 NVSKPMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 + P R NV K L EF++ + P + + F VG LVDV+G + GK Sbjct: 147 TIPWPERQHLRKHGNVKAMKHLKEFKIADVSEFTPGQQLKAEELFEVGDLVDVSGTSSGK 206 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G+++R +HG S SHR HGS GC P RV+K KMAGRMG R TVK L Sbjct: 207 GFQGSIRRWGMKRGPMSHG-SKSHRQHGSIGCSATPSRVYKGLKMAGRMGNERKTVKKLP 265 Query: 179 VVSVDDKRGLILVKGCVPGAK 199 V+ V+D+ I+V+G VPG K Sbjct: 266 VMMVNDEEKYIVVRGSVPGKK 286 >gi|1185166|emb|CAA91649.1| 50S ribosomal protein L3 [Odontella sinensis] Length = 196 Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 76/190 (40%), Positives = 108/190 (56%), Gaps = 2/190 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT +++ G IPVT+L + C + +T +GY A+Q+G G K++++P G Sbjct: 1 MTQIFDESGNIIPVTILKVGPCVITQVKTDLNDGYNAIQIGYGTVSNKSLTQPELGHLQK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 N+ P K L EFRV ++ VG V + + GQ +DVTG + GKGFSG KRHNF Sbjct: 61 SNIQPLKYLKEFRVNNPEEF-KVGQVVNVESLSTGQFIDVTGKSSGKGFSGLQKRHNFTR 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 THG S +HR+ GS G PGRV KKMAG++G K L+++ V+ +++V Sbjct: 120 GPMTHG-SKNHRAPGSIGMGTTPGRVLPGKKMAGQLGNKVTKTKKLKIIQVNGNENILVV 178 Query: 192 KGCVPGAKKN 201 KG VPG N Sbjct: 179 KGSVPGKPGN 188 >gi|261409521|ref|YP_003245762.1| 50S ribosomal protein L3 [Paenibacillus sp. Y412MC10] gi|329922035|ref|ZP_08277828.1| 50S ribosomal protein L3 [Paenibacillus sp. HGF5] gi|261285984|gb|ACX67955.1| 50S ribosomal protein L3 [Paenibacillus sp. Y412MC10] gi|328942418|gb|EGG38682.1| 50S ribosomal protein L3 [Paenibacillus sp. HGF5] Length = 207 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 85/208 (40%), Positives = 118/208 (56%), Gaps = 4/208 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT V+ EG IPVTV+ C V+ + L+ +GY A+QVG + K +K Sbjct: 3 GILGRKLGMTQVFTPEGVVIPVTVIEAGPCVVLQKKDLENDGYEAIQVGFSDKKENRSNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G N +PK+ + E R D + VG F G+ VDVTG++ GKGF G Sbjct: 63 PEAGHAKKANTAPKRYVREIR-GVDLASVEVGQELKADVFAEGEFVDVTGISKGKGFQGV 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR +HG S HR GS G Q RV K K++ G MG VT++ LEVV VD Sbjct: 122 IKRWGQSRGPMSHG-SRYHRRPGSMGSIQ-ANRVPKGKRLPGHMGNETVTIQKLEVVKVD 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 +R +ILVKG +PG KK ++ ++++ K Sbjct: 180 AERNVILVKGSIPGPKK-GFVQIKETVK 206 >gi|286142620|gb|ADC41340.1| ribosomal protein L3 [Streptomyces griseoruber] Length = 167 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 76/167 (45%), Positives = 98/167 (58%), Gaps = 1/167 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ V RT D +GY +VQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPNVVTQVRTNDADGYESVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVEIRTA-DASEYTLGQEITAEVFEAGIKVDVTGKSKGKGFAGVMKRHNFKGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 A HG HRS GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTV 166 >gi|315649699|ref|ZP_07902783.1| 50S ribosomal protein L3 [Paenibacillus vortex V453] gi|315274887|gb|EFU38263.1| 50S ribosomal protein L3 [Paenibacillus vortex V453] Length = 207 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 85/208 (40%), Positives = 118/208 (56%), Gaps = 4/208 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT V+ EG IPVTV+ C V+ + L+ +GY A+QVG + K +K Sbjct: 3 GILGRKLGMTQVFTPEGIVIPVTVIEAGPCVVLQKKDLENDGYEAIQVGFSDKKENRSNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G N +PK+ + E R D + VG F G+ VDVTG++ GKGF G Sbjct: 63 PEAGHAKKANTAPKRYVREIR-GVDLASVEVGQELKADVFAEGEFVDVTGISKGKGFQGV 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR +HG S HR GS G Q RV K K++ G MG VT++ LEVV VD Sbjct: 122 IKRWGQSRGPMSHG-SRYHRRPGSMGSIQ-ANRVPKGKRLPGHMGNETVTIQKLEVVRVD 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 +R +ILVKG +PG KK ++ ++++ K Sbjct: 180 AERNVILVKGSIPGPKK-GFVQIKETVK 206 >gi|229496170|ref|ZP_04389890.1| 50S ribosomal protein L3 [Porphyromonas endodontalis ATCC 35406] gi|229316748|gb|EEN82661.1| 50S ribosomal protein L3 [Porphyromonas endodontalis ATCC 35406] Length = 205 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 78/197 (39%), Positives = 113/197 (57%), Gaps = 3/197 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G P TV+ L C V +T + +GY A+Q+G E K+ +K Sbjct: 3 GLLGKKIGMTSVFSADGVNTPCTVIELGPCVVTQVKTSEHDGYDALQLGFQETTEKHATK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+P + L EF+ D L G F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVAPMRHLAEFKGFSGDYKL--GDTIKVDIFENVVYVDVIGTSKGKGFQGV 120 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 + RH FGG+ ++THG R+ G+ G P +VFK +MAG+ G RVTV+NLEV+ V Sbjct: 121 VGRHGFGGVGQSTHGQHNRLRAPGAVGACSYPAKVFKGTRMAGQTGNERVTVQNLEVIKV 180 Query: 183 DDKRGLILVKGCVPGAK 199 + L+L+KG +PG K Sbjct: 181 MPEHNLLLIKGSIPGHK 197 >gi|324528045|gb|ADY48869.1| 50S ribosomal protein L3 [Ascaris suum] Length = 231 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 80/213 (37%), Positives = 126/213 (59%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RKLGM+ ++ +G IPVT++ ++ + +T + +GY A+Q+G + K K+ Sbjct: 1 MMKGLVGRKLGMSQMFATDGTIIPVTMIEIEPNVITQIKTTETDGYNAIQIGVEDKKQKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLF-EFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 ++P G + K+++ EF V +D+ +G + F+ G++VDV G + GK Sbjct: 61 TTQPEMGHVKKAGLETGKRVYKEFTVGEDEVSNYTLGQELTVDIFSDGEIVDVQGTSKGK 120 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF GA+KRHN +HG S HR GS G +VFK K + G MG VT +NLE Sbjct: 121 GFQGAIKRHNQSRGPMSHG-SRYHRRPGSMGAVAP--QVFKGKNLPGHMGSKTVTTQNLE 177 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +V VD KR ++++KG VPGAKK S++ ++ + K Sbjct: 178 IVKVDTKRNVLIIKGNVPGAKK-SFVTIKAAVK 209 >gi|294507051|ref|YP_003571109.1| 50S ribosomal protein L3 [Salinibacter ruber M8] gi|294343379|emb|CBH24157.1| 50S ribosomal protein L3 [Salinibacter ruber M8] Length = 208 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 83/201 (41%), Positives = 112/201 (55%), Gaps = 4/201 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M SG++ +K+GMT V++ EG + TV+ V ++ ++GY AVQ+G K KN Sbjct: 1 MSSGLIGKKVGMTSVFDDEGNNVACTVVEAGPNVVTQVKSEGRDGYSAVQLGFDNVKEKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V++ M G F PK+ L EFR DD DL V V F + +DV G++ GKG Sbjct: 61 VTQAMLGHFEKAGCPPKRMLSEFRDFGDDVDLGDV--VRVEDLFQEDERIDVVGVSKGKG 118 Query: 120 FSGAMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 F G +KRH F G+ THG S R GS G DP RVFK +MAG+ GG R ++NL Sbjct: 119 FQGVVKRHGFSGVGMMTHGQSDRQRHPGSIGASADPSRVFKGVRMAGQTGGERTKIQNLR 178 Query: 179 VVSVDDKRGLILVKGCVPGAK 199 VV + + IL+ G VPG K Sbjct: 179 VVRILADQNAILIHGSVPGPK 199 >gi|221194518|ref|ZP_03567575.1| 50S ribosomal protein L3 [Atopobium rimae ATCC 49626] gi|221185422|gb|EEE17812.1| 50S ribosomal protein L3 [Atopobium rimae ATCC 49626] Length = 206 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 87/207 (42%), Positives = 119/207 (57%), Gaps = 3/207 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M + ++ RKLGMT V++ +PVTV+ C V +T + +GY AVQ+G G+ K+ Sbjct: 1 MVNTILGRKLGMTQVWDENDNVVPVTVILAGPCTVSQVKTAETDGYDAVQIGFGDISEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM G F + V P + L E RV ++ G + + F+ VDV G + GKGF Sbjct: 61 VNKPMAGHFKAQGVEPMRYLREVRVPAGEE-HKCGDTVTVADFSEVTAVDVIGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF THG S + R GS G P RV K M G MG RVTVKNL++V Sbjct: 120 QGTIKRWNFSRGPMTHG-SRNQRRPGSIGQCAYPARVRKGLHMYGHMGAERVTVKNLKLV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207 VD ++ L+L+KG VPG KN+ + VR Sbjct: 179 RVDAEQNLMLIKGAVPGG-KNALVQVR 204 >gi|302669961|ref|YP_003829921.1| ribosomal protein L3 RplC [Butyrivibrio proteoclasticus B316] gi|302394434|gb|ADL33339.1| ribosomal protein L3 RplC [Butyrivibrio proteoclasticus B316] Length = 227 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 86/227 (37%), Positives = 123/227 (54%), Gaps = 19/227 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++ +G +PVTVL C V +T++ +GY AVQVG + K K Sbjct: 1 MKKAILATKVGMTQIFKEDGSLVPVTVLQAGPCVVTQIKTVENDGYSAVQVGFVDKKEKV 60 Query: 61 V----------------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V +K +G F VS K+ + EF+++ D +G+ F Sbjct: 61 VNKDKNGNKTIYHRHGATKAEQGHFKKAGVSCKRYVREFKLENAADY-ALGAEIKADVFA 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G +D T ++ GKGF GA+K++ HG S HR GS G DP RVFK K M Sbjct: 120 EGDKIDATAISKGKGFQGAIKKNGQHRGPMAHG-SKFHRHQGSNGSSSDPSRVFKGKGMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 G MG +VTV+NLEVV VD + LILVKG +PG KK + ++++ K Sbjct: 179 GHMGSVKVTVQNLEVVRVDADKNLILVKGAIPGPKK-GLVTIKETVK 224 >gi|286142658|gb|ADC41359.1| ribosomal protein L3 [Streptomyces humidus] Length = 167 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 76/167 (45%), Positives = 98/167 (58%), Gaps = 1/167 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ V RT D +GY +VQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPNVVTQVRTNDSDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVEIRTA-DAAEYTLGQEITAEVFEAGVKVDVTGKSKGKGFAGVMKRHNFKGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 A HG HRS GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTV 166 >gi|293977931|ref|YP_003543361.1| 50S ribosomal protein L3P [Candidatus Sulcia muelleri DMIN] gi|292667862|gb|ADE35497.1| LSU ribosomal protein L3P [Candidatus Sulcia muelleri DMIN] Length = 206 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 79/206 (38%), Positives = 130/206 (63%), Gaps = 5/206 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ + +GMT +Y+ G +P +++ C V+ +T +K+GY + Q+G E K KN + Sbjct: 2 SGIIGKNIGMTSMYDESGFNVPCSIIEAGPCIVLQIKTKEKDGYDSCQLGFDEKKYKNTN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ FF +PKKK+FEF ++ + + G++ ++F +LV++TG + GKGF G Sbjct: 62 KPLLFFFKKFKSTPKKKIFEFPIKGN---IKSGNIIKLNFFHENELVNITGFSKGKGFQG 118 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH F G+ +HG R+ GS G DP RVFK +MAGRMG +VT+KN +++ Sbjct: 119 VVKRHGFSGVGERSHGQHNRSRAPGSIGAGSDPSRVFKGTRMAGRMGNKKVTLKNRKILK 178 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 +D +++KG VPGA KNS+++++ Sbjct: 179 IDLLNNFLIIKGSVPGA-KNSYLIIK 203 >gi|83816242|ref|YP_445167.1| 50S ribosomal protein L3 [Salinibacter ruber DSM 13855] gi|109893553|sp|Q2S3R4|RL3_SALRD RecName: Full=50S ribosomal protein L3 gi|83757636|gb|ABC45749.1| ribosomal protein L3 [Salinibacter ruber DSM 13855] Length = 208 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 83/201 (41%), Positives = 112/201 (55%), Gaps = 4/201 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M SG++ +K+GMT V++ EG + TV+ V ++ ++GY AVQ+G K KN Sbjct: 1 MSSGLIGKKVGMTSVFDDEGNNVACTVVEAGPNVVTQVKSEGRDGYSAVQLGFDNVKEKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V++ M G F PK+ L EFR DD DL V V F + +DV G++ GKG Sbjct: 61 VTQAMLGHFEKAGCPPKRMLSEFRDFGDDVDLGDV--VRVQDLFQEDERIDVVGVSKGKG 118 Query: 120 FSGAMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 F G +KRH F G+ THG S R GS G DP RVFK +MAG+ GG R ++NL Sbjct: 119 FQGVVKRHGFSGVGMMTHGQSDRQRHPGSIGASADPSRVFKGVRMAGQTGGERTKIQNLR 178 Query: 179 VVSVDDKRGLILVKGCVPGAK 199 VV + + IL+ G VPG K Sbjct: 179 VVRILADQNAILIHGSVPGPK 199 >gi|257067060|ref|YP_003153316.1| 50S ribosomal protein L3 [Anaerococcus prevotii DSM 20548] gi|256798940|gb|ACV29595.1| ribosomal protein L3 [Anaerococcus prevotii DSM 20548] Length = 209 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 81/190 (42%), Positives = 111/190 (58%), Gaps = 2/190 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+S + K+GMT V + +G PVTVL D VV +T++ +GY A+QVG + K KN Sbjct: 1 MKS-IFTTKVGMTQVIDEDGVITPVTVLKADENVVVQVKTVETDGYNAIQVGYMDKKEKN 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP+R F N S K+ L E ++ L +G + F G +VDV + GKG Sbjct: 60 VTKPVREHFKKANASTKRFLREINFGEETPELNLGDTITVEQFEAGDIVDVVATSKGKGT 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR N+G A+HG S SHR G+ DP RVFK +K +G+MG RVTV+N+EVV Sbjct: 120 QGAIKRWNYGRGPASHG-SKSHRVAGARAAGSDPARVFKGRKGSGKMGNERVTVQNIEVV 178 Query: 181 SVDDKRGLIL 190 V + IL Sbjct: 179 KVSVEDNYIL 188 >gi|325479159|gb|EGC82256.1| 50S ribosomal protein L3 [Anaerococcus prevotii ACS-065-V-Col13] Length = 209 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 79/190 (41%), Positives = 112/190 (58%), Gaps = 2/190 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+S + K+GMT V + +G PVTVL D VV +T++ +GY A+QVG + K KN Sbjct: 1 MKS-IFTTKVGMTQVIDEDGVITPVTVLKADENVVVQVKTVETDGYNAIQVGYMDKKEKN 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V KP+R F N + K+ L E ++ L +G V + F G +VD+ + GKG Sbjct: 60 VKKPVREHFKKANAATKRYLKEVNFGEETPELNLGDVITVEQFEAGDIVDIVATSKGKGT 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR N+G A+HG S SHR G+ DP RVFK +K +G+MG RVT++N+EVV Sbjct: 120 QGAIKRWNYGRGPASHG-SKSHRVAGARAAGSDPARVFKGRKGSGKMGNERVTIQNIEVV 178 Query: 181 SVDDKRGLIL 190 V+ + IL Sbjct: 179 KVNVEDNYIL 188 >gi|332170559|gb|AEE19814.1| 50S ribosomal protein L3 [Krokinobacter diaphorus 4H-3-7-5] Length = 203 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 79/206 (38%), Positives = 125/206 (60%), Gaps = 6/206 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C + RT + +GY A+Q+G +AK N + Sbjct: 2 SGLIGKKVGMTSIFDENGKNIPCTVIEAGPCVITQVRTKEADGYEALQLGFDDAKKANKA 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K+K+ EF Q + +G + +F G+ VDV+G + GKGF G Sbjct: 62 AAGH--AKKAGTVAKRKVVEF--QGFEGEFKLGDAITVDHFAEGEFVDVSGTSKGKGFQG 117 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH F G+ +ATHG R+ GS G P RVFK +MAGRMGG+++ V+NL+V+ Sbjct: 118 VVKRHGFRGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGDKIKVQNLKVLK 177 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L++VKGCVPG KN++++++ Sbjct: 178 VVAEKNLLVVKGCVPG-HKNAYVIIQ 202 >gi|227501134|ref|ZP_03931183.1| ribosomal protein L3 [Anaerococcus tetradius ATCC 35098] gi|227216719|gb|EEI82120.1| ribosomal protein L3 [Anaerococcus tetradius ATCC 35098] Length = 209 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 79/190 (41%), Positives = 111/190 (58%), Gaps = 2/190 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+S + K+GMT V + +G PVTVL D VV +T++ +GY A+QVG + K KN Sbjct: 1 MKS-IFTTKVGMTQVIDEDGVITPVTVLKADENVVVQVKTVETDGYNAIQVGYMDKKEKN 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP+R F N S K+ L E + L +G + + F G +VDV + GKG Sbjct: 60 VTKPVREHFKKANASTKRYLREVNFGDETPELNLGDIITVEQFEAGDIVDVVATSKGKGT 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR N+G A+HG S SHR G+ DP RVFK +K +G+MG RVT++N+E+V Sbjct: 120 QGAIKRWNYGRGPASHG-SKSHRVAGARAAGSDPARVFKGRKGSGKMGNERVTIQNIEIV 178 Query: 181 SVDDKRGLIL 190 V + IL Sbjct: 179 KVSVEDNYIL 188 >gi|304405616|ref|ZP_07387275.1| 50S ribosomal protein L3 [Paenibacillus curdlanolyticus YK9] gi|304345655|gb|EFM11490.1| 50S ribosomal protein L3 [Paenibacillus curdlanolyticus YK9] Length = 207 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 84/208 (40%), Positives = 120/208 (57%), Gaps = 4/208 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V+ EG +PVTV+ V+ + + +GY AVQ+G + K KN +K Sbjct: 3 GILGKKIGMTQVFTAEGNVVPVTVIEAGPNVVLQKKDQENDGYEAVQLGFVDKKEKNSTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G N +PK+ + E R + VG V FT G+ VDVTG++ GKGF G Sbjct: 63 PAQGHAKKANTAPKRYIREIRGINLGE-YEVGQVIKADVFTAGEFVDVTGVSKGKGFQGV 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR +HG S HR GS G Q RV K K++ G MG +T++NLEVV VD Sbjct: 122 IKRWGQSTGPMSHG-SRYHRGPGSMGSIQ-ANRVPKGKRLPGHMGSETITIQNLEVVRVD 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 +R +ILVKG +PG KN+ + V+ + K Sbjct: 180 AERNVILVKGSIPGP-KNALVKVKLTVK 206 >gi|115444097|ref|NP_001045828.1| Os02g0137200 [Oryza sativa Japonica Group] gi|113535359|dbj|BAF07742.1| Os02g0137200 [Oryza sativa Japonica Group] Length = 274 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 80/201 (39%), Positives = 114/201 (56%), Gaps = 4/201 (1%) Query: 4 GVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVH--RTLDKNGYMAVQVGAGEAKVKN 60 GV+A K+GM ++ G+ +PVTV+ VV +T +GY AVQVG + + Sbjct: 58 GVMATKVGMMTYFDPATGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVREEK 117 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G P + L EFR+Q D P + F G LVD++G +IGKGF Sbjct: 118 LTRPELGHLGKAGAPPLRHLQEFRLQSVDGYDPGQPLDFADMFKEGDLVDISGKSIGKGF 177 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRHNF THG S SHR+ GS G PGRV+K KKM GRMGG + ++ L++V Sbjct: 178 QGGIKRHNFKRGLMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIV 236 Query: 181 SVDDKRGLILVKGCVPGAKKN 201 +D+ ++++KG VPG N Sbjct: 237 KIDNDLKVVMIKGAVPGKPGN 257 >gi|162446957|ref|YP_001620089.1| 50S ribosomal protein L3 [Acholeplasma laidlawii PG-8A] gi|189042828|sp|A9NED3|RL3_ACHLI RecName: Full=50S ribosomal protein L3 gi|161985064|gb|ABX80713.1| large subunit ribosomal protein L3 [Acholeplasma laidlawii PG-8A] Length = 212 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 84/214 (39%), Positives = 125/214 (58%), Gaps = 8/214 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT +++ G IPVTV+ ++ V+ +T++ +GY A QVG + K Sbjct: 1 MAKGILGRKIGMTQIFDENGVLIPVTVIDVEGNVVLQQKTVEVDGYQATQVGFESKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQK-DDDL--LPVGSVFSPSYFTVGQLVDVTGMTIG 117 +KP G N +PK+ + E R +++L L VG+ FT G+ VDVTG + G Sbjct: 61 SNKPELGHVKKANTAPKRFVKEIRFDALNNELLALEVGTEIKADLFTAGEDVDVTGTSKG 120 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF G +KRHN THG S HR GS G + K K + G+MG +VTV+NL Sbjct: 121 KGFQGNIKRHNQSRGPMTHG-SRYHRGVGSLGAIKGN---MKGKNLPGQMGNEQVTVQNL 176 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 ++V+VD + L+LV G VPG +K +++VR + K Sbjct: 177 KIVAVDTENDLLLVSGSVPGPRK-GYVVVRSAIK 209 >gi|71029452|ref|XP_764369.1| 60S ribosomal protein L3 [Theileria parva strain Muguga] gi|68351323|gb|EAN32086.1| 60S ribosomal protein L3, putative [Theileria parva] Length = 347 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 82/198 (41%), Positives = 114/198 (57%), Gaps = 5/198 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 RSGV+A K+G +++ G R VTV H+D C V+ RT++KNGY A+Q+G G +K Sbjct: 88 RSGVLAYKIGCMSLWDDWGVRHAVTVCHVDRCVVLEKRTIEKNGYEALQLGLGYKNIKQQ 147 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SKP G F + K + EF+ D LLP G FS +FT GQ V V+G + KGF Sbjct: 148 SKPNIGRFIKLGTGSKNHIAEFKCS-SDCLLPEGHYFSVRHFTPGQWVFVSGWSKAKGFK 206 Query: 122 GAMKRHNFGGLRATHGVSI-SHRSHGSTGCRQDPGRVFKNKKMAGRMGGN-RVTVKNLEV 179 GAM+R +FGG +HG +H + GS + V++N KM G +G + RVT N V Sbjct: 207 GAMRRWSFGGQNQSHGTECKAHSAPGSISQGKSVHIVWRNTKMGGHVGPDPRVT--NCRV 264 Query: 180 VSVDDKRGLILVKGCVPG 197 ++ R LI +KG +PG Sbjct: 265 FRIETHRNLIFLKGAIPG 282 >gi|209528437|ref|ZP_03276868.1| ribosomal protein L3 [Arthrospira maxima CS-328] gi|209491125|gb|EDZ91549.1| ribosomal protein L3 [Arthrospira maxima CS-328] Length = 229 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 80/214 (37%), Positives = 119/214 (55%), Gaps = 19/214 (8%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT V++ E G+ IPVTV+ C + +T +GY A+Q+G GE K Sbjct: 1 MSVGILGTKLGMTQVFDAETGKAIPVTVVQAGPCTITQVKTEATDGYTAIQLGYGEVPNK 60 Query: 60 N----------------VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103 +S +G + N + L E+R++ D+ +G F Sbjct: 61 TRKLNTRKSPDKEVNKYLSHAEQGHLTKSNSPLVRHLKEYRLESTDNF-ELGQEIKVDTF 119 Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 +GQ+VDVTG+++G+GF+G KR+NF HG S +HR GS G PGRV+ KKM Sbjct: 120 ELGQMVDVTGISMGRGFAGNQKRNNFRRGPMAHG-SKNHRLPGSIGPGTTPGRVYPGKKM 178 Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197 AGR GG ++T + L +V +D +R L+L+KG +PG Sbjct: 179 AGRYGGKQITTRKLTIVRIDLERNLLLIKGSIPG 212 >gi|242063968|ref|XP_002453273.1| hypothetical protein SORBIDRAFT_04g002980 [Sorghum bicolor] gi|241933104|gb|EES06249.1| hypothetical protein SORBIDRAFT_04g002980 [Sorghum bicolor] Length = 270 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 81/201 (40%), Positives = 112/201 (55%), Gaps = 4/201 (1%) Query: 4 GVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVH--RTLDKNGYMAVQVGAGEAKVKN 60 GV+A K+GM ++ E G+ +PVTV+ VV +T +GY AVQVG + Sbjct: 54 GVMATKVGMMTYFDPETGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVREDK 113 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G P K L EFR+ D P + F G ++DV+G TIGKGF Sbjct: 114 LTRPELGHLGKAGAPPLKHLQEFRLTAVDAFEPGQPLDFADLFKEGDIIDVSGNTIGKGF 173 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRHNF THG S SHR GS G PGRV+K KKM GRMGG + ++ L++V Sbjct: 174 QGGIKRHNFKRGLMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGKKTKIRKLKIV 232 Query: 181 SVDDKRGLILVKGCVPGAKKN 201 +D+ ++++KG VPG N Sbjct: 233 KIDNDLRVLMIKGAVPGKPGN 253 >gi|286142804|gb|ADC41432.1| ribosomal protein L3 [Streptomyces galbus] Length = 167 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 76/167 (45%), Positives = 98/167 (58%), Gaps = 1/167 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ V RT D +GY +VQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVEIRTA-DASEYTLGQEITAEVFEAGIKVDVTGKSKGKGFAGVMKRHNFKGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 A HG HRS GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTV 166 >gi|116624202|ref|YP_826358.1| 50S ribosomal protein L3P [Candidatus Solibacter usitatus Ellin6076] gi|122253082|sp|Q01W92|RL3_SOLUE RecName: Full=50S ribosomal protein L3 gi|116227364|gb|ABJ86073.1| LSU ribosomal protein L3P [Candidatus Solibacter usitatus Ellin6076] Length = 210 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 81/210 (38%), Positives = 118/210 (56%), Gaps = 3/210 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVK 59 M G++ +K+GMT ++ +G+ +PVT+L C VV +T +GY AVQ+G E K + Sbjct: 1 MSPGILGKKIGMTQIFRPDGQVVPVTLLKAGPCMVVQRKTPSTDGYDAVQLGLVEFIKPQ 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G V K + EF + D L G F VDV G++ GKG Sbjct: 61 RINKPTAGRLKKAGVEGAKFMREFTLGPGSDDLKTGDQVLVDQFKPKDKVDVVGISKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRH+F G +HG S+ HR+ GS G P RV +M G +G +VTV+NLEV Sbjct: 121 FAGVVKRHHFRGGEGSHG-SMFHRAPGSIGASSFPSRVVPGMRMGGHLGNAQVTVRNLEV 179 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 + VD + +++VKG VPG ++LVR S Sbjct: 180 IDVDTEDNVLVVKGAVPGP-NGGYVLVRRS 208 >gi|282878759|ref|ZP_06287527.1| 50S ribosomal protein L3 [Prevotella buccalis ATCC 35310] gi|281299150|gb|EFA91551.1| 50S ribosomal protein L3 [Prevotella buccalis ATCC 35310] Length = 204 Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 80/205 (39%), Positives = 121/205 (59%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V++ +G+ IP TV+ C V +T + +GY A+Q+G GEAK K +K Sbjct: 3 GLIGRKIGMTSVFSADGKNIPCTVIEAGPCVVTQVKTEETDGYKALQLGFGEAKEKRTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F +PKK L EF+ + +L G + F + VDV G + GKGF G Sbjct: 63 PLLGTFKKAGTTPKKHLVEFKFDGEYNL---GDTITVELFNDTEFVDVIGTSKGKGFQGV 119 Query: 124 MKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG+ + THG R G+ G P +VFK +M G+MGG+RVT +NL V+ V Sbjct: 120 VKRHGFGGVGQRTHGQDDRARKPGAIGACSYPAKVFKGMRMGGQMGGDRVTTQNLRVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 ++ L++VKG G ++ ++ + Sbjct: 180 IPEKNLLIVKGSFAGCNGSTVLIEK 204 >gi|7674308|sp|Q9ZI50|RL3_AQUPY RecName: Full=50S ribosomal protein L3 gi|4165865|gb|AAD08785.1| ribosomal protein L3 [Aquifex pyrophilus] Length = 244 Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 92/230 (40%), Positives = 131/230 (56%), Gaps = 17/230 (7%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVK 59 M G++ K+GMT V +G IPVTV+ VV ++++ K+GY A+QVGA EAK K Sbjct: 1 MPLGLIGEKVGMTRVLLKDGTAIPVTVIKFPVNYVVQVKSVNTKDGYNALQVGAYEAKEK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-----LPVGSVFSPSYFTVGQLVDVTGM 114 +++KP+ G F V ++L+EFRV ++ L V VF P G LVDV G+ Sbjct: 61 HLTKPLIGHFKKHGVPLLRRLWEFRVDNPEEFKSGQELRVQDVFKP-----GDLVDVWGI 115 Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 + G+GF+G MKR +F G +HG HR+ G+ G R DPGRV+K KKM G G V V Sbjct: 116 SKGRGFAGVMKRWDFAGFPRSHG-HRYHRAVGAIGQRTDPGRVWKGKKMPGHYGAKPVRV 174 Query: 175 KNLEVVSVDDKRGLILVKG-CVPGAKKNSWILV----RDSFKSAVNCKGK 219 + L VV+ + ILVKG +PG K +L+ R +++ + K K Sbjct: 175 QGLFVVASLPEENAILVKGSALPGHNKGIVVLLPAVERIAYRKSQKLKQK 224 >gi|286142692|gb|ADC41376.1| ribosomal protein L3 [Streptomyces acrimycini] Length = 167 Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 76/167 (45%), Positives = 98/167 (58%), Gaps = 1/167 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ V RT D +GY +VQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVEIRTA-DASEYTLGQEVTAEVFEAGVKVDVTGKSKGKGFAGVMKRHNFKGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 A HG HRS GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTV 166 >gi|298243968|ref|ZP_06967775.1| 50S ribosomal protein L3 [Ktedonobacter racemifer DSM 44963] gi|297557022|gb|EFH90886.1| 50S ribosomal protein L3 [Ktedonobacter racemifer DSM 44963] Length = 262 Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 89/249 (35%), Positives = 122/249 (48%), Gaps = 51/249 (20%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ RK+GMT V+ G IPVTV+ + C V +T+ ++GY AVQ+G E +K+ Sbjct: 1 MLDALLGRKVGMTQVFGQNGTVIPVTVIEVGPCIVTQVKTVARDGYEAVQIGFEETTLKH 60 Query: 61 VSKPMRGFF-------------------------------------------------SS 71 ++P G Sbjct: 61 STRPELGHLGHSLPLLKGQRKALQTHDQQAKSEENKEEEKQSKQVRKLLKIRENRQRRPG 120 Query: 72 VNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129 + P K L E +Q+ DL + +G F+ S FT G++VD+ G+T GKGF G +KRH F Sbjct: 121 PELGPFKVLREVGLQEGVDLGSVELGHSFNASLFTDGEIVDIVGITKGKGFQGGVKRHGF 180 Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLI 189 G THG S R+ GS G PGRV K +MAGRMG RVTVK L++V D +R L+ Sbjct: 181 RGGPRTHGQSDRLRAPGSIGSGTTPGRVLKGTRMAGRMGNARVTVKKLQIVQSDPERNLL 240 Query: 190 LVKGCVPGA 198 +VKG VPGA Sbjct: 241 VVKGSVPGA 249 >gi|258646053|ref|ZP_05733522.1| 50S ribosomal protein L3 [Dialister invisus DSM 15470] gi|260403423|gb|EEW96970.1| 50S ribosomal protein L3 [Dialister invisus DSM 15470] Length = 213 Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 85/215 (39%), Positives = 128/215 (59%), Gaps = 5/215 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ KLGM+ V+ G +PVTV+ + VV +T++ +GY AVQ+G G K K+ Sbjct: 1 MSKAILGTKLGMSQVFAENGDLVPVTVVEVLPNVVVGVKTVETDGYNAVQIGYGAVKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P++G F + P K L E+R+ + + VG + F G+ VDV G++ GKGF Sbjct: 61 LTRPVKGQFEKAGIDPVKYLREYRLAEKPEYT-VGQTLAADIFAAGEFVDVIGISRGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK--MAGRMGGNRVTVKNLE 178 +G +KR N +HG S +HR S G R G K M G++GG+RVTV+NLE Sbjct: 120 AGTIKRWNHQRGPESHG-SKNHRQTASLGARMSGGGGKVFKGKKMPGQLGGDRVTVQNLE 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VV VD R ++LVKG +PGA K S ++V+ + KS+ Sbjct: 179 VVRVDTDRSILLVKGGIPGA-KGSLVMVKTAVKSS 212 >gi|313678365|ref|YP_004056105.1| 50S ribosomal protein L3 [Mycoplasma bovis PG45] gi|312950290|gb|ADR24885.1| ribosomal protein L3 [Mycoplasma bovis PG45] Length = 276 Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 80/210 (38%), Positives = 121/210 (57%), Gaps = 6/210 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT +Y G+RIPVTV+ + V T+++NGY+A Q+ E K K V++ Sbjct: 3 GILGRKVGMTQIYTELGQRIPVTVVEVKPNVVTKVLTVEQNGYVATQLATVEKKAKRVNR 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F +PK+ + E R + +L G + S F G+LVD+TG + GKGF+G Sbjct: 63 PLAGQFIQAKTTPKQYIKEIRGMQGYEL---GQEVNASIFEAGELVDITGTSKGKGFAGT 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KR N +HG + TG D RV K M G +G + TV+NLE+V Sbjct: 120 IKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVVKGMTMPGHLGSEKTTVQNLEIVK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD ++LVKG +PGAKK S+++++ + K Sbjct: 180 VDVANNILLVKGSIPGAKK-SFVIIKQAVK 208 >gi|307128705|ref|YP_003880735.1| 50S ribosomal protein L3 [Candidatus Sulcia muelleri CARI] gi|306483167|gb|ADM90037.1| 50S ribosomal protein L3 [Candidatus Sulcia muelleri CARI] Length = 206 Score = 134 bits (338), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 81/206 (39%), Positives = 131/206 (63%), Gaps = 5/206 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ + +GMT +++ G IP T++ C V+ +T +K+GY + Q+G E K+ N + Sbjct: 4 SGIIGKNIGMTSIFDESGCNIPCTIIEAGPCIVLQIKTKEKDGYDSCQLGFDEKKINNTN 63 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ GFF + +PKKK+FEF ++K + G + + F + V++TG++ GKGF G Sbjct: 64 KPLLGFFKKIKSTPKKKIFEFYIKKK---IKSGDLIKLNIFNENEYVNITGISKGKGFQG 120 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH F G+ +HG R+ GS G DP RVFK KMAGR+G +VT+K ++++ Sbjct: 121 VVKRHGFSGVGEKSHGQHNRSRAPGSIGAGSDPSRVFKGTKMAGRLGNKKVTIKKIKILK 180 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 +D + L++VKG VPG KNS++++R Sbjct: 181 IDLIKNLLIVKGSVPG-HKNSYLIIR 205 >gi|194708314|gb|ACF88241.1| unknown [Zea mays] Length = 262 Score = 134 bits (338), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 80/201 (39%), Positives = 112/201 (55%), Gaps = 4/201 (1%) Query: 4 GVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVH--RTLDKNGYMAVQVGAGEAKVKN 60 GV+A K+GM ++ E G+ +PVTV+ VV +T +GY AVQVG + Sbjct: 46 GVMATKVGMMTYFDPETGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVREDK 105 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G P + L EFR+ D P + F G L+DV+G +IGKGF Sbjct: 106 LTRPELGHLGKAGAPPLRHLQEFRLTAVDAFEPGQPLDFADLFKEGDLIDVSGNSIGKGF 165 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRHNF THG S SHR GS G PGRV+K KKM GRMGG + ++ L++V Sbjct: 166 QGGIKRHNFKRGLMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIV 224 Query: 181 SVDDKRGLILVKGCVPGAKKN 201 +D+ ++++KG VPG N Sbjct: 225 KIDNNLRVLMIKGAVPGKPGN 245 >gi|240279928|gb|EER43432.1| 50S ribosomal protein L3 [Ajellomyces capsulatus H143] Length = 247 Score = 134 bits (338), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 69/158 (43%), Positives = 103/158 (65%), Gaps = 1/158 (0%) Query: 43 KNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSY 102 KNGY AVQ+G G + V++PM G F++ V+PK+ + EFRV+ ++ LLP+G + + ++ Sbjct: 60 KNGYYAVQIGCGWKHERAVTRPMLGHFAANGVAPKRHIHEFRVKDENGLLPIGEMINANW 119 Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNK 161 F GQ VD + G GF+G MKRH F G +HGVS++HR S + RV+ K Sbjct: 120 FQEGQYVDARSNSRGMGFAGVMKRHGFHGQDRSHGVSLTHRSMGSSGPGQGGGSRVYPGK 179 Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAK 199 KMAG MG +VT++NL+V+ VD ++G+++V G V G K Sbjct: 180 KMAGNMGNKQVTLQNLKVLKVDAEKGIVVVNGNVSGPK 217 >gi|42559164|sp|O80360|RK3_TOBAC RecName: Full=50S ribosomal protein L3, chloroplastic; Flags: Precursor gi|189096128|pdb|3BBO|F Chain F, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome gi|3298437|dbj|BAA31509.1| chloroplast ribosomal protein L3 [Nicotiana tabacum] Length = 259 Score = 134 bits (338), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 83/199 (41%), Positives = 113/199 (56%), Gaps = 2/199 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62 GV+A KLGM + G +PVTV+ +V +T +GY AVQVG + + ++ Sbjct: 45 GVMATKLGMMSFFEESGTVVPVTVVGFREGNIVTQIKTEATDGYNAVQVGYRRVRDRKLT 104 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G + P + L EFR+Q D + F G LVDV+G TIGKGF G Sbjct: 105 KPEMGHLEKSGIIPLRHLQEFRLQSIDGFEVTQKLDFGELFKEGDLVDVSGTTIGKGFQG 164 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHNF + THG S SHR GS G PGRV+K KKM GRMGG + ++ L++V + Sbjct: 165 GIKRHNFKRGQMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKI 223 Query: 183 DDKRGLILVKGCVPGAKKN 201 DD+ +I++KG +PG N Sbjct: 224 DDQLNIIMIKGALPGKPGN 242 >gi|291567784|dbj|BAI90056.1| 50S ribosomal protein L3 [Arthrospira platensis NIES-39] Length = 229 Score = 134 bits (338), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 81/214 (37%), Positives = 118/214 (55%), Gaps = 19/214 (8%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT V++ E G+ IPVTV+ C + +T +GY A+Q+G GE K Sbjct: 1 MSVGILGTKLGMTQVFDTETGKAIPVTVVQAGPCTITQVKTEATDGYTAIQLGYGEVPNK 60 Query: 60 N----------------VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103 +S +G + N + L E+R++ D+ +G F Sbjct: 61 TRKLNTRKSPDKEVNKYLSHAEQGHLTKSNSPLVRHLKEYRLESTDNF-ELGQEVKVDAF 119 Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 GQ+VDVTG+++G+GF+G KR+NF HG S +HR GS G PGRV+ KKM Sbjct: 120 EPGQIVDVTGISMGRGFAGNQKRNNFRRGPMAHG-SKNHRLPGSIGPGTTPGRVYPGKKM 178 Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197 AGR GG ++T + L +V VD +R L+L+KG +PG Sbjct: 179 AGRYGGKQITTRKLTIVRVDLERNLLLIKGSIPG 212 >gi|284052648|ref|ZP_06382858.1| 50S ribosomal protein L3 [Arthrospira platensis str. Paraca] Length = 229 Score = 134 bits (338), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 81/214 (37%), Positives = 118/214 (55%), Gaps = 19/214 (8%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT V++ E G+ IPVTV+ C + +T +GY A+Q+G GE K Sbjct: 1 MSVGILGTKLGMTQVFDTETGKAIPVTVVQAGPCTITQVKTEATDGYTAIQLGYGEVPNK 60 Query: 60 N----------------VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103 +S +G + N + L E+R++ D+ +G F Sbjct: 61 TRKLNTRKSPDKEVNKYLSHAEQGHLTKSNSPLVRHLKEYRLESTDNF-ELGQQVKVDAF 119 Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 GQ+VDVTG+++G+GF+G KR+NF HG S +HR GS G PGRV+ KKM Sbjct: 120 EPGQIVDVTGISMGRGFAGNQKRNNFRRGPMAHG-SKNHRLPGSIGPGTTPGRVYPGKKM 178 Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197 AGR GG ++T + L +V VD +R L+L+KG +PG Sbjct: 179 AGRYGGKQITTRKLTIVRVDLERNLLLIKGSIPG 212 >gi|195657099|gb|ACG48017.1| 50S ribosomal protein L3 [Zea mays] Length = 267 Score = 134 bits (338), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 80/201 (39%), Positives = 112/201 (55%), Gaps = 4/201 (1%) Query: 4 GVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVH--RTLDKNGYMAVQVGAGEAKVKN 60 GV+A K+GM ++ E G+ +PVTV+ VV +T +GY AVQVG + Sbjct: 51 GVMATKVGMMTYFDPETGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVREDK 110 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G P + L EFR+ D P + F G L+DV+G +IGKGF Sbjct: 111 LTRPELGHLGKAGAPPLRHLQEFRLTAVDAFEPGQPLDFADLFKEGDLIDVSGNSIGKGF 170 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRHNF THG S SHR GS G PGRV+K KKM GRMGG + ++ L++V Sbjct: 171 QGGIKRHNFKRGLMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIV 229 Query: 181 SVDDKRGLILVKGCVPGAKKN 201 +D+ ++++KG VPG N Sbjct: 230 KIDNNLRVLMIKGAVPGKPGN 250 >gi|194700790|gb|ACF84479.1| unknown [Zea mays] Length = 230 Score = 134 bits (338), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 80/201 (39%), Positives = 112/201 (55%), Gaps = 4/201 (1%) Query: 4 GVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVH--RTLDKNGYMAVQVGAGEAKVKN 60 GV+A K+GM ++ E G+ +PVTV+ VV +T +GY AVQVG + Sbjct: 14 GVMATKVGMMTYFDPETGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVREDK 73 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G P + L EFR+ D P + F G L+DV+G +IGKGF Sbjct: 74 LTRPELGHLGKAGAPPLRHLQEFRLTAVDAFEPGQPLDFADLFKEGDLIDVSGNSIGKGF 133 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRHNF THG S SHR GS G PGRV+K KKM GRMGG + ++ L++V Sbjct: 134 QGGIKRHNFKRGLMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIV 192 Query: 181 SVDDKRGLILVKGCVPGAKKN 201 +D+ ++++KG VPG N Sbjct: 193 KIDNNLRVLMIKGAVPGKPGN 213 >gi|286142594|gb|ADC41327.1| ribosomal protein L3 [Streptomyces platensis] Length = 167 Score = 134 bits (337), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 74/167 (44%), Positives = 99/167 (59%), Gaps = 1/167 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ C V RT D++GY +VQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDQDGYDSVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRH F G Sbjct: 61 DVTPRRHLVEVRTA-DAGEYTLGQELTAETFESGVKVDVTGKSKGKGFAGVMKRHGFHGG 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 +A+HG HR GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 KASHGAHRVHRKPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTV 166 >gi|327540578|gb|EGF27153.1| 50S ribosomal protein L3 [Rhodopirellula baltica WH47] Length = 217 Score = 134 bits (337), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 75/205 (36%), Positives = 112/205 (54%), Gaps = 22/205 (10%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++ +G +PVTV+ C V+ R+ D++GY AVQ+G + + + RG ++ Sbjct: 1 MTQIFLEDGTAVPVTVVQAGPCHVLQVRSKDRDGYEAVQMGFEDKPRRLAKRSERGQVAT 60 Query: 72 V-------------------NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 + + P++ + EFR + + VG + F + VD+T Sbjct: 61 IESKRSKKRSAAGIEAPAKADCEPQRFVREFRGSSEAN---VGDTLTVEQFNDVKKVDIT 117 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G + G+GF+G MKRHNF G RATHGV HR G TG P R FK K+MAG+ G +V Sbjct: 118 GTSKGRGFAGVMKRHNFAGQRATHGVKKCHRHAGGTGMSASPSRTFKGKRMAGQYGNAKV 177 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPG 197 T +NLEVV VD + L++++G VPG Sbjct: 178 TTRNLEVVRVDAENNLLMIRGAVPG 202 >gi|286142618|gb|ADC41339.1| ribosomal protein L3 [Streptomyces tuirus] Length = 167 Score = 134 bits (337), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 75/167 (44%), Positives = 98/167 (58%), Gaps = 1/167 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ V RT D +GY ++Q+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESIQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVEIRTA-DASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 A HG HRS GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTV 166 >gi|286142608|gb|ADC41334.1| ribosomal protein L3 [Streptomyces platensis] Length = 167 Score = 134 bits (337), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 74/167 (44%), Positives = 99/167 (59%), Gaps = 1/167 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ C V RT D++GY +VQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDQDGYDSVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRH F G Sbjct: 61 DVTPRRHLVEVRTT-DAGEYTLGQELTAETFESGVKVDVTGKSKGKGFAGVMKRHGFHGG 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 +A+HG HR GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 KASHGAHRVHRKPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTV 166 >gi|286142656|gb|ADC41358.1| ribosomal protein L3 [Streptomyces glaucescens] Length = 167 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 75/167 (44%), Positives = 98/167 (58%), Gaps = 1/167 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ V RT D +GY +VQ+ G+ + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGDIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVEIRTS-DASEYTLGQEITAEVFEAGVKVDVTGKSKGKGFAGVMKRHNFRGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 A HG HRS GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTV 166 >gi|227485525|ref|ZP_03915841.1| ribosomal protein L3 [Anaerococcus lactolyticus ATCC 51172] gi|227236524|gb|EEI86539.1| ribosomal protein L3 [Anaerococcus lactolyticus ATCC 51172] Length = 211 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 78/182 (42%), Positives = 108/182 (59%), Gaps = 1/182 (0%) Query: 9 KLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGF 68 K+GMT V + +G PVTVL D VV +T D +GY A+QVG + K KNV KP+RG Sbjct: 8 KVGMTQVIDEDGVITPVTVLKADENVVVQVKTTDVDGYNAIQVGTVDKKEKNVKKPIRGH 67 Query: 69 FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128 + S K+ L E + ++ L G + F G+LVDV ++ GKG GA+KR N Sbjct: 68 YDKAGASYKRYLKEINLGEEVTELKAGDKITVDVFEEGELVDVVAISKGKGTQGAIKRWN 127 Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188 +G A+HG S SHR G+ DP RVFK +K +G+MG RVT++N++VV V+ + Sbjct: 128 YGRGPASHG-SKSHRVAGARAAGSDPSRVFKGRKGSGKMGHERVTIQNVKVVKVNAEDSY 186 Query: 189 IL 190 IL Sbjct: 187 IL 188 >gi|254449111|ref|ZP_05062563.1| ribosomal protein L3 [gamma proteobacterium HTCC5015] gi|198261303|gb|EDY85596.1| ribosomal protein L3 [gamma proteobacterium HTCC5015] Length = 176 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 78/176 (44%), Positives = 103/176 (58%), Gaps = 2/176 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVK 59 M G+V RK GMT V+ +G +PVTV+ +V ++ + +GY ++QV GE + Sbjct: 1 MAIGLVGRKAGMTRVFTEDGVSVPVTVIEAAPNRVTQVKSQEAADGYSSLQVTKGERRAS 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV-FSPSYFTVGQLVDVTGMTIGK 118 V+KPM G ++ V L+EFR++ ++ F GQ VDV G +IGK Sbjct: 61 RVTKPMAGHYAKAGVEAGDGLWEFRLEGEEGEGIEVGGELKVDLFEAGQKVDVIGTSIGK 120 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 GF G +KRHNF ATHG SISHR+ GSTG Q PGRVFK K+MAG MG RVT Sbjct: 121 GFQGGIKRHNFRSQDATHGNSISHRAPGSTGQCQTPGRVFKGKRMAGHMGSKRVTA 176 >gi|330903578|gb|EGH34150.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. japonica str. M301072PT] Length = 139 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 71/137 (51%), Positives = 88/137 (64%), Gaps = 2/137 (1%) Query: 69 FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128 F+ NV+ + + EFR+++ D G F GQLVDVTG + GKGF G +KR N Sbjct: 1 FAKANVAAGRTVMEFRLEEGD--YQAGDQIKAEIFAAGQLVDVTGQSKGKGFQGTIKRWN 58 Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188 F G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV VD +R L Sbjct: 59 FRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVVRVDAERNL 118 Query: 189 ILVKGCVPGAKKNSWIL 205 +LVKG VPGA + +L Sbjct: 119 LLVKGAVPGATGGNLVL 135 >gi|153004713|ref|YP_001379038.1| 50S ribosomal protein L3 [Anaeromyxobacter sp. Fw109-5] gi|166233114|sp|A7HBF8|RL3_ANADF RecName: Full=50S ribosomal protein L3 gi|152028286|gb|ABS26054.1| ribosomal protein L3 [Anaeromyxobacter sp. Fw109-5] Length = 236 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 84/205 (40%), Positives = 117/205 (57%), Gaps = 9/205 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M +G++A+KLGMT ++ EG IPVTVL C VV +T +K+GY AV +G GE K+ Sbjct: 1 MATGLLAKKLGMTQIFTAEGDCIPVTVLEAGPCTVVRRKTAEKDGYDAVVIGWGEVDEKH 60 Query: 61 ---VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL---LPVGSVFS-PSYFTVGQLVDVTG 113 ++KP G F + + E RV KD L L G V + F Q +DV G Sbjct: 61 AHRLTKPEVGVFKKAGTPVFRHVKEIRV-KDAKLLGELKAGDVLTVDKVFKQDQRIDVAG 119 Query: 114 MTIGKGFSGAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 +T G+GF+G MKR N G R + HR G+ G R+ PG+V+K K + G G + V Sbjct: 120 VTKGRGFTGVMKRWNMHGAARDSSTTHEHHRHVGAIGQRKTPGKVWKGKHLPGHYGVDNV 179 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPG 197 T++NL +V V+ + L+LVKG VPG Sbjct: 180 TIQNLTIVGVEADKNLLLVKGAVPG 204 >gi|330902741|gb|EGH33754.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. japonica str. M301072PT] Length = 143 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 73/144 (50%), Positives = 93/144 (64%), Gaps = 3/144 (2%) Query: 69 FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128 F+ NV+ + + EFR+++ D G F GQLVDVTG + GKGF G +KR N Sbjct: 1 FAKANVAAGRTVMEFRLEEGD--YQAGDQIKAEIFAAGQLVDVTGQSKGKGFQGTIKRWN 58 Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188 F G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV VD +R L Sbjct: 59 FRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVVRVDAERNL 118 Query: 189 ILVKGCVPGAKKNSWILVRDSFKS 212 +LVKG VPGA + ++VR + K+ Sbjct: 119 LLVKGAVPGATGGN-LVVRPAAKA 141 >gi|294155415|ref|YP_003559799.1| 50S ribosomal protein L3 [Mycoplasma crocodyli MP145] gi|291600390|gb|ADE19886.1| 50S ribosomal protein L3 [Mycoplasma crocodyli MP145] Length = 269 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 82/214 (38%), Positives = 117/214 (54%), Gaps = 6/214 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT VY G+R+ VTV+ + V + +KNGY A+Q+ + K +K Sbjct: 3 GILGRKVGMTQVYTETGQRVAVTVIEVQPNVVTKVLSQEKNGYTAIQLAVFDKKASRSNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ +PK+ + E R D +G V + F G+LVDVTG + GKGF+G Sbjct: 63 PETGHFAKAKTTPKRYVKEVR---DMSGYELGQVLQANVFKAGELVDVTGTSKGKGFAGT 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRHN +HG + TG D +V K M G++G R TV+NLEVV Sbjct: 120 IKRHNQHIGPKSHGGGGGSQPVRQTGSLGDIAGNKVVKGMTMPGQLGNERTTVQNLEVVK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 VD L+L+KG +PG KK S+++VR K N Sbjct: 180 VDLVNNLLLIKGSIPGPKK-SFVMVRQGVKGLAN 212 >gi|218678066|ref|ZP_03525963.1| 50S ribosomal protein L3 [Rhizobium etli CIAT 894] Length = 137 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 68/117 (58%), Positives = 83/117 (70%), Gaps = 4/117 (3%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT VYN G +PVTVL ++ QVV RT++KNGY AVQ+GAG+AKVKN SK MRG F+ Sbjct: 1 MTRVYNDAGEHVPVTVLRMEAVQVVATRTVEKNGYTAVQLGAGQAKVKNTSKAMRGNFAV 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128 NV PK KL EFRV +D+LL +G+ +F GQLVDVTG TIGKGF+ +RH Sbjct: 61 ANVEPKAKLQEFRVS-EDNLLEIGTELKAGHFAAGQLVDVTGTTIGKGFA---RRHE 113 >gi|224370691|ref|YP_002604855.1| 50S ribosomal protein L3 [Desulfobacterium autotrophicum HRM2] gi|259647408|sp|C0Q9X3|RL3_DESAH RecName: Full=50S ribosomal protein L3 gi|223693408|gb|ACN16691.1| RplC [Desulfobacterium autotrophicum HRM2] Length = 207 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 75/199 (37%), Positives = 111/199 (55%), Gaps = 2/199 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ +G +PVTV+ C V + +GY A+Q+G E + Sbjct: 1 MFKGMLGKKIGMTSIFAADGTLVPVTVVRFGPCVVTQVKAEKTDGYNALQLGFDERALAK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G FS + + EFRV+ D+ VG F +G V+V+G + G+GF Sbjct: 61 CNKPKVGHFSKSGSTGFNVVREFRVENTDEF-EVGQNIGLDGFAIGDKVNVSGTSKGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH F THG +HR GS GC P RV K ++M G MG +R TVKNLE++ Sbjct: 120 AGTIKRHGFSRGPETHGCR-NHRKPGSIGCSAWPARVVKGRRMPGHMGVDRKTVKNLEII 178 Query: 181 SVDDKRGLILVKGCVPGAK 199 + L+++KG VPG K Sbjct: 179 DIRPDENLVMIKGPVPGWK 197 >gi|297824271|ref|XP_002880018.1| 50S ribosomal protein L3 [Arabidopsis lyrata subsp. lyrata] gi|297325857|gb|EFH56277.1| 50S ribosomal protein L3 [Arabidopsis lyrata subsp. lyrata] Length = 271 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 81/199 (40%), Positives = 112/199 (56%), Gaps = 2/199 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGM + +G +PVTV+ +V +TL +GY AVQ+G + K ++ Sbjct: 57 GVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYDAVQIGYRRVRDKKLT 116 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G P + L EFR+ + P + F G LVDV G TIGKGF G Sbjct: 117 KPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGDLVDVAGTTIGKGFQG 176 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH+F + THG S SHR+ GS G PGRV+K KKM GRMGG R ++ L++V V Sbjct: 177 GIKRHHFKRGQMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTRTKIRKLKIVKV 235 Query: 183 DDKRGLILVKGCVPGAKKN 201 D + ++++KG +PG N Sbjct: 236 DKELNVVMIKGALPGKPGN 254 >gi|21553426|gb|AAM62519.1| 50S ribosomal protein L3 [Arabidopsis thaliana] Length = 271 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 81/199 (40%), Positives = 112/199 (56%), Gaps = 2/199 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGM + +G +PVTV+ +V +TL +GY AVQ+G + K ++ Sbjct: 57 GVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYDAVQIGYRRVRDKKLT 116 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G P + L EFR+ + P + F G LVDV G TIGKGF G Sbjct: 117 KPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGDLVDVAGTTIGKGFQG 176 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH+F + THG S SHR+ GS G PGRV+K KKM GRMGG R ++ L++V V Sbjct: 177 GIKRHHFKRGQMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTRTKIRKLKIVKV 235 Query: 183 DDKRGLILVKGCVPGAKKN 201 D + ++++KG +PG N Sbjct: 236 DKELNVVMIKGALPGKPGN 254 >gi|42409125|dbj|BAD10375.1| putative 50S ribosomal protein L3 [Oryza sativa Japonica Group] gi|42409256|dbj|BAD10519.1| putative 50S ribosomal protein L3 [Oryza sativa Japonica Group] Length = 215 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 78/199 (39%), Positives = 113/199 (56%), Gaps = 4/199 (2%) Query: 6 VARKLGMTCVYN-IEGRRIPVTVLHL-DNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62 +A K+GM ++ G+ +PVTV+ + VV +T +GY AVQVG + + ++ Sbjct: 1 MATKVGMMTYFDPATGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVREEKLT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 +P G P + L EFR+Q D P + F G LVD++G +IGKGF G Sbjct: 61 RPELGHLGKAGAPPLRHLQEFRLQSVDGYDPGQPLDFADMFKEGDLVDISGKSIGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHNF THG S SHR+ GS G PGRV+K KKM GRMGG + ++ L++V + Sbjct: 121 GIKRHNFKRGLMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKI 179 Query: 183 DDKRGLILVKGCVPGAKKN 201 D+ ++++KG VPG N Sbjct: 180 DNDLKVVMIKGAVPGKPGN 198 >gi|308070975|ref|YP_003872580.1| 50S ribosomal protein L3 [Paenibacillus polymyxa E681] gi|310644202|ref|YP_003948961.1| 50S ribosomal protein l3 [Paenibacillus polymyxa SC2] gi|305860254|gb|ADM72042.1| 50S ribosomal protein L3 [Paenibacillus polymyxa E681] gi|309249153|gb|ADO58720.1| 50S ribosomal protein L3 [Paenibacillus polymyxa SC2] Length = 207 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 117/208 (56%), Gaps = 4/208 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT V+ EG + VTV+ C V+ + L+ +GY A+Q+G + K K +K Sbjct: 3 GILGKKLGMTQVFTPEGNVLAVTVIEAGPCVVLQKKDLENDGYEAIQLGFSDKKEKRSNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G N +PK+ + E R D VG FT G+ VDVTG++ GKGF+G Sbjct: 63 PEAGHAKKANTAPKRYVRELR-GIDLAAYEVGQELKADVFTEGEFVDVTGISKGKGFAGV 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR HG S HR GS G Q RV K K + G MG VT++ LEVV +D Sbjct: 122 IKRWGQSRGPMAHG-SRYHRGPGSMGSIQ-ANRVPKGKHLPGHMGHETVTIQRLEVVKID 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 +R ++LVKG +PG KNS++ V ++ K Sbjct: 180 TERNVLLVKGSIPGP-KNSFVKVLETVK 206 >gi|15224205|ref|NP_181831.1| ribosomal protein L3 family protein [Arabidopsis thaliana] gi|42559537|sp|Q9SKX4|RK3A_ARATH RecName: Full=50S ribosomal protein L3-1, chloroplastic; Flags: Precursor gi|4531443|gb|AAD22128.1| 50S ribosomal protein L3 [Arabidopsis thaliana] gi|110740515|dbj|BAE98363.1| 50S ribosomal protein L3 [Arabidopsis thaliana] gi|208879532|gb|ACI31311.1| At2g43030 [Arabidopsis thaliana] gi|330255107|gb|AEC10201.1| 50S ribosomal protein L3-1 [Arabidopsis thaliana] Length = 271 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 81/199 (40%), Positives = 112/199 (56%), Gaps = 2/199 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGM + +G +PVTV+ +V +TL +GY AVQ+G + K ++ Sbjct: 57 GVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYDAVQIGYRRVRDKKLT 116 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G P + L EFR+ + P + F G LVDV G TIGKGF G Sbjct: 117 KPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGDLVDVAGTTIGKGFQG 176 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH+F + THG S SHR+ GS G PGRV+K KKM GRMGG R ++ L++V V Sbjct: 177 GIKRHHFKRGQMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTRTKIRKLKIVKV 235 Query: 183 DDKRGLILVKGCVPGAKKN 201 D + ++++KG +PG N Sbjct: 236 DKELNVVMIKGALPGKPGN 254 >gi|282891949|ref|ZP_06300428.1| hypothetical protein pah_c200o113 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498209|gb|EFB40549.1| hypothetical protein pah_c200o113 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 220 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 81/214 (37%), Positives = 121/214 (56%), Gaps = 10/214 (4%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV------ 58 ++ +K GMT ++ G I TV+ ++ V +T +K+GY AVQ+G + + Sbjct: 5 LMGKKRGMTQRFDEAGNLIVCTVIEVEPNVVTQLKTKEKDGYNAVQLGFEKIEANDPRTV 64 Query: 59 -KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 + SKP++G ++ V P++ EFR++ D +G F +DV G++ G Sbjct: 65 KRRTSKPLQGHYAKAGVEPRRFSGEFRIE-DSAEFSLGQELKVDLFKEAGYLDVIGVSKG 123 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KG+ G MK HNFGG A HG HR GSTG R PGR K A MG +RVTV+NL Sbjct: 124 KGYQGVMKLHNFGGGPAAHGSGF-HRHAGSTGMRSTPGRCLPGGKRASHMGVDRVTVENL 182 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 ++V VD++ LILV+G VPGA +S + +R++ K Sbjct: 183 KIVLVDEENNLILVQGQVPGA-YDSLLFLREARK 215 >gi|71894653|ref|YP_278761.1| 50S ribosomal protein L3 [Mycoplasma synoviae 53] gi|109893527|sp|Q4A5C1|RL3_MYCS5 RecName: Full=50S ribosomal protein L3 gi|71851441|gb|AAZ44050.1| 50S ribosomal protein L3 [Mycoplasma synoviae 53] Length = 268 Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 85/210 (40%), Positives = 120/210 (57%), Gaps = 6/210 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT +Y+ G IPVTV+ + V T NGY AVQ+ + + K +K Sbjct: 3 GILGRKVGMTQIYSETGTAIPVTVIEVKPNVVTKVLTKQSNGYEAVQLSVFDKREKLSNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F N +PK+ + E R +L G + F+VG+LVDV+G + GKGF+GA Sbjct: 63 PETGHFKKANTTPKRFVKEIRNMNGYEL---GQSVLVNIFSVGELVDVSGTSKGKGFAGA 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KR+N +HG + TG D RVFK M G +G + T++NLEVV Sbjct: 120 IKRYNQHIGPKSHGGGGGSQPIRQTGSLGDISGNRVFKGMTMPGHLGSEKATLQNLEVVK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD K L+LVKG VPGA KNS+++V+ + K Sbjct: 180 VDLKENLLLVKGSVPGA-KNSFVVVKSAVK 208 >gi|183221347|ref|YP_001839343.1| 50S ribosomal protein L3 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911440|ref|YP_001962995.1| 50S ribosomal protein L3 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|226730528|sp|B0SAF4|RL3_LEPBA RecName: Full=50S ribosomal protein L3 gi|226730529|sp|B0SSH7|RL3_LEPBP RecName: Full=50S ribosomal protein L3 gi|167776116|gb|ABZ94417.1| 50S Ribosomal protein L3 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779769|gb|ABZ98067.1| 50S ribosomal protein L3 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 207 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 85/202 (42%), Positives = 114/202 (56%), Gaps = 6/202 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGM ++N +G+ + VTVL + C V +T +GY AVQ+ G+AK K+ Sbjct: 1 MAKGLIGEKLGMAHIFNNDGKMVTVTVLRVGPCFVSQVKTEANDGYEAVQLAFGDAKEKH 60 Query: 61 VSKPMRGFFSSVNV-SPKKKLFEFRVQKDDDLLPVGS-VFSPSYFTVGQLVDVTGMTIGK 118 ++K G N+ +PKK L EF K + + VGS V F + V VTG + GK Sbjct: 61 LTKAELGHIKKANIATPKKTLVEF---KGFEGVAVGSEVKLADIFALDDTVKVTGTSKGK 117 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G G +KRH F G A HG S R GS G PGRVFK KM GRMG + TV+NL+ Sbjct: 118 GTQGVVKRHGFAGGPAGHG-SRFQRHPGSIGSNTTPGRVFKGLKMGGRMGSEQTTVRNLK 176 Query: 179 VVSVDDKRGLILVKGCVPGAKK 200 VV +D L+ V G VPG ++ Sbjct: 177 VVKIDADANLVFVSGPVPGRER 198 >gi|325117734|emb|CBZ53285.1| putative ribosomal protein L3p [Neospora caninum Liverpool] Length = 407 Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 79/193 (40%), Positives = 112/193 (58%), Gaps = 3/193 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K+GM +++ G R VTV +D C V+ RTLDK+GY A +G G + V Sbjct: 153 RTGLLAYKIGMMSLWDGWGERHAVTVCQVDRCVVMEQRTLDKDGYEACVMGIGYQPIHKV 212 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KPM G + + PK ++ EF+ D LLPVG S +FT GQ V V+G + KG+ Sbjct: 213 TKPMLGVYIRSRIEPKSRIAEFKCS-SDCLLPVGHEMSVRHFTPGQHVFVSGWSKDKGYL 271 Query: 122 GAMKRHNFGGLRATHGVSI-SHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G KR F G A+HGV +H S GS G + V++ KKMAG GG+ V N +V Sbjct: 272 GVKKRWGFAGQNASHGVEAKAHSSPGSIGQSKTVNVVWRFKKMAGHAGGDPRVV-NCKVF 330 Query: 181 SVDDKRGLILVKG 193 ++ +R LI +KG Sbjct: 331 RIEAQRNLIFLKG 343 >gi|90962406|ref|YP_536322.1| 50S ribosomal protein L3 [Lactobacillus salivarius UCC118] gi|227891544|ref|ZP_04009349.1| 50S ribosomal protein L3 [Lactobacillus salivarius ATCC 11741] gi|123269876|sp|Q1WS90|RL3_LACS1 RecName: Full=50S ribosomal protein L3 gi|90821600|gb|ABE00239.1| LSU ribosomal protein L3P [Lactobacillus salivarius UCC118] gi|227866691|gb|EEJ74112.1| 50S ribosomal protein L3 [Lactobacillus salivarius ATCC 11741] gi|300215031|gb|ADJ79447.1| 50S ribosomal protein L3 [Lactobacillus salivarius CECT 5713] Length = 207 Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 81/210 (38%), Positives = 123/210 (58%), Gaps = 9/210 (4%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V+ G +PVTV+ +D+ V+ +T++ +GY A+Q+G + + +K Sbjct: 5 GILGKKVGMTQVFTENGELVPVTVVKVDSNVVLQVKTMENDGYEAIQLGFDDLREVLTNK 64 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 P +G + N +PK+ + E R D +L VG F G VDVTG + G GF Sbjct: 65 PAKGHAAKANTTPKRFVREIR---DVELGEYKVGDEVKADIFEAGDFVDVTGTSKGHGFQ 121 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G++KR+ HG S HR GS G + RV K K + GRMGGNRVT++NLE+V Sbjct: 122 GSIKRNGQHRGPMAHG-SRYHRRPGSMGVIIN--RVMKGKLLPGRMGGNRVTIQNLEIVK 178 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D + G++L+KG VPGA K S + ++ + K Sbjct: 179 ADTENGVLLIKGNVPGANK-SLVTIKSTVK 207 >gi|47212780|emb|CAF95545.1| unnamed protein product [Tetraodon nigroviridis] Length = 336 Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 82/212 (38%), Positives = 117/212 (55%), Gaps = 8/212 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGY----MAVQVGAGEAK 57 R G+VA KLGM ++ G R VT+L + +C V+ + L K Y A+ VG A Sbjct: 84 RVGLVAVKLGMAPIWTKAGERHVVTMLQVQDCHVI--KYLPKEEYDGHTAALVVGGKNAS 141 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 S+ F + V PK+K+ F++ DD L+ G+ ++F GQ VDVT +IG Sbjct: 142 PFYKSEQQMEMFRNAGVPPKQKITTFKIS-DDALIKPGTPLYAAHFRPGQYVDVTAKSIG 200 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF G MKR F G A+HG + +HR G++G DP +VFK KKM G MG +T L Sbjct: 201 KGFQGVMKRWGFKGQPASHGQTKTHRRPGASGPGGDPAKVFKGKKMPGMMGNIYITAFGL 260 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 ++ V+ K ++ V G VPG +N + VRD+ Sbjct: 261 KIWRVNTKYNVLYVHGSVPG-HRNCLLKVRDT 291 >gi|302842094|ref|XP_002952591.1| plastid/chloroplast ribosomal protein L3 [Volvox carteri f. nagariensis] gi|300262230|gb|EFJ46438.1| plastid/chloroplast ribosomal protein L3 [Volvox carteri f. nagariensis] Length = 259 Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 83/201 (41%), Positives = 109/201 (54%), Gaps = 11/201 (5%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ K GM + G +P TV+ L+ VV +T D +GY AVQVG + V+ Sbjct: 45 GVLGTKAGMMSYFTENGLCVPATVIALEEGNVVTQVKTEDTDGYNAVQVGYKAVAERKVT 104 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKD----DDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 KP G V P + L EF++ KD + P + S G+ VD+ G+T+GK Sbjct: 105 KPELGHLKKAGVQPMRHLVEFKL-KDRATVESYQPGQELDVSSLLKEGEAVDIAGVTVGK 163 Query: 119 GFSGAMKR--HNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 GF G +KR H G + THG S SHR HGS G P RVF KMAG+MG R TVKN Sbjct: 164 GFQGTIKRWHHKRGAM--THG-SKSHREHGSIGSATTPSRVFPGLKMAGQMGNVRATVKN 220 Query: 177 LEVVSVDDKRGLILVKGCVPG 197 ++ VD +R ++VKG VPG Sbjct: 221 QTLLKVDSERRALIVKGSVPG 241 >gi|85057802|ref|YP_456718.1| 50S ribosomal protein L3P [Aster yellows witches'-broom phytoplasma AYWB] gi|109893411|sp|Q2NIV4|RL3_AYWBP RecName: Full=50S ribosomal protein L3 gi|84789907|gb|ABC65639.1| LSU ribosomal protein L3P [Aster yellows witches'-broom phytoplasma AYWB] Length = 221 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 78/215 (36%), Positives = 123/215 (57%), Gaps = 9/215 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+N +G +PVT++ + V+ + +D++GY A Q+G + + KN Sbjct: 1 MAQGILGKKIGMTQVFNEQGELVPVTIVDVAANVVLQQKNVDQDGYQATQIGFCDKREKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL----LPVGSVFSPSYFTVGQLVDVTGMTI 116 SKPM G F +PK+ + E D + L VG++ + F VG LVDVTG + Sbjct: 61 TSKPMLGHFKKATTAPKRFIKEINFSSDVNSNLANLVVGALITNDLFQVGDLVDVTGTSK 120 Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 GKGF+G++KRHN +HG R H G K KK+ G MG VT++N Sbjct: 121 GKGFAGSIKRHNQSRGPESHG----SRYHRRPGSMGPIKGKLKGKKLPGHMGYETVTIQN 176 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 L ++S+D ++ L L+KG VPG K +++++ + K Sbjct: 177 LAILSIDTEKNLFLIKGNVPGPNK-GFVMIKSAVK 210 >gi|257064320|ref|YP_003143992.1| LSU ribosomal protein L3P [Slackia heliotrinireducens DSM 20476] gi|256791973|gb|ACV22643.1| LSU ribosomal protein L3P [Slackia heliotrinireducens DSM 20476] Length = 206 Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 86/199 (43%), Positives = 117/199 (58%), Gaps = 2/199 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M + + +K+GMT ++N + + +P TV+ + +V +T D +GY AVQ+G G K + Sbjct: 1 MINAIYGKKIGMTQLFNEDEKVVPCTVIVAEPNKVCQIKTTDTDGYEAVQLGFGAIKPQK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM G F+ + P + L E RV+ D VG + + F + V VTG +IGKGF Sbjct: 61 VNKPMAGHFAKLGTEPTRYLREVRVENAADY-KVGDLQTVEAFADVKKVHVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH F G HG HR+ GS G P RV K +M G MG N VT KNLEVV Sbjct: 120 QGVIKRHGFRGGPGGHGAHF-HRAPGSVGMCATPSRVLKGVRMPGHMGCNTVTTKNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAK 199 +D ++ LILVKG VPGAK Sbjct: 179 RIDAEQNLILVKGAVPGAK 197 >gi|326511938|dbj|BAJ95950.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326521546|dbj|BAK00349.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 264 Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 78/201 (38%), Positives = 114/201 (56%), Gaps = 4/201 (1%) Query: 4 GVVARKLGMTCVYN-IEGRRIPVTVLHL-DNCQVVVH-RTLDKNGYMAVQVGAGEAKVKN 60 GV+A K+GM ++ G+ +PVTV+ + VV +T +GY AVQVG + Sbjct: 48 GVMATKVGMMTYFDPANGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVREDK 107 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G + P + L EFR+ D P + F G LVDV+ +IGKGF Sbjct: 108 LTRPELGHLGKASAPPLRHLQEFRLVAVDAFDPGQELEFNELFKEGDLVDVSAKSIGKGF 167 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRHNF THG S SHR+ GS G PGRV+K KKM GRMGG + ++ L++V Sbjct: 168 QGGIKRHNFKRGLMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIV 226 Query: 181 SVDDKRGLILVKGCVPGAKKN 201 +D+ ++++KG +PG + N Sbjct: 227 RIDNDLKVVMIKGAIPGKQGN 247 >gi|325973271|ref|YP_004250335.1| 50S ribosomal protein L3 [Mycoplasma suis str. Illinois] gi|325989706|ref|YP_004249405.1| 50S ribosomal protein L3 [Mycoplasma suis KI3806] gi|323574791|emb|CBZ40451.1| 50S ribosomal protein L3 [Mycoplasma suis] gi|323651873|gb|ADX97955.1| 50S ribosomal protein L3 [Mycoplasma suis str. Illinois] Length = 230 Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 78/205 (38%), Positives = 120/205 (58%), Gaps = 6/205 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVK 59 M V+ +K+GM+ +++ G IPVT+L L QV+ +T++K GY A+ VG GE + + Sbjct: 1 MSREVICQKIGMSSIFSEGGELIPVTLLKLIPLQVLSCKTVEKEGYNALVVGVGEECEER 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGK 118 +SKP+RG F V+ ++K+ E + VG+ S S F +G+ + + G++ G Sbjct: 61 KLSKPVRGQFQKKGVALRRKITELSWDGIKEY-SVGNFVSFSDLFQIGEKIKIQGVSRGM 119 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ---DPGRVFKNKKMAGRMGGNRVTVK 175 GF+GA+KR NF THG HR GS + P +V+K KKM+GRMGG T+ Sbjct: 120 GFTGAIKRWNFATGPKTHGAGYPHRFQGSLETGRGGMSPQKVWKGKKMSGRMGGENCTIL 179 Query: 176 NLEVVSVDDKRGLILVKGCVPGAKK 200 NL +V +D + ++ VKG +PG KK Sbjct: 180 NLRIVHIDSENNIVAVKGSIPGRKK 204 >gi|168034315|ref|XP_001769658.1| predicted protein [Physcomitrella patens subsp. patens] gi|162679007|gb|EDQ65459.1| predicted protein [Physcomitrella patens subsp. patens] Length = 223 Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 77/199 (38%), Positives = 107/199 (53%), Gaps = 2/199 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62 G++ K+GM + +G +P TV+ +V +T +GY AVQVG + + ++ Sbjct: 9 GLMGTKMGMMTYFTEDGIAVPCTVVGFHEGNIVTQVKTDATDGYTAVQVGYRRVRDRKLT 68 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G + V P + L EFRV + P + F G L+DV G +IGKGF G Sbjct: 69 KPQLGHLNKVGAIPMRHLQEFRVVSAEGFEPNQRLQLEEMFKAGDLIDVVGDSIGKGFQG 128 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR+NF + THG S S R GS G PGRV+ KKM G+MG R V+ LE+V V Sbjct: 129 GIKRYNFARGQMTHG-SKSKRQLGSIGAGTTPGRVYPGKKMPGQMGSGRTKVRKLEIVKV 187 Query: 183 DDKRGLILVKGCVPGAKKN 201 D + +L+KG VPG N Sbjct: 188 DPELRAVLIKGSVPGKPGN 206 >gi|269215705|ref|ZP_06159559.1| 50S ribosomal protein L3 [Slackia exigua ATCC 700122] gi|269131192|gb|EEZ62267.1| 50S ribosomal protein L3 [Slackia exigua ATCC 700122] Length = 206 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 88/199 (44%), Positives = 116/199 (58%), Gaps = 2/199 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M + + +KLGMT ++N + +PVTV+ + V +T + +GY AVQ+G G K K Sbjct: 1 MINAIYGKKLGMTQLFNENDQVVPVTVIVAEPNTVCQVKTKETDGYEAVQLGFGAIKAKK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM G F+ V P + L E RV+ D VG + F + V VTG +IGKGF Sbjct: 61 VNKPMGGHFAKSGVEPTRHLREVRVESAADY-KVGDTQTVEAFADVKKVHVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH F G H + HR+ GS G P RVFK +M G MG + VT KNLEVV Sbjct: 120 QGVIKRHGFAGGPGGH-GAHFHRAPGSVGQCATPSRVFKGVRMPGHMGTDTVTTKNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAK 199 +D ++ LILVKG VPGAK Sbjct: 179 RIDAEQNLILVKGAVPGAK 197 >gi|258620527|ref|ZP_05715565.1| 50S ribosomal protein L3 [Vibrio mimicus VM573] gi|258587406|gb|EEW12117.1| 50S ribosomal protein L3 [Vibrio mimicus VM573] Length = 167 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 72/160 (45%), Positives = 100/160 (62%), Gaps = 1/160 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV AG K V+K Sbjct: 3 GLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF GA Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQGA 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 +KR NF THG S+SHR+ GS G Q PGRVFK KK+ Sbjct: 122 VKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKI 161 >gi|167755912|ref|ZP_02428039.1| hypothetical protein CLORAM_01432 [Clostridium ramosum DSM 1402] gi|167703904|gb|EDS18483.1| hypothetical protein CLORAM_01432 [Clostridium ramosum DSM 1402] Length = 242 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 125/220 (56%), Gaps = 12/220 (5%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ +G IPVTV+ D V+ +T+ +GY A+QVG + + K +K Sbjct: 3 GILGRKIGMTQVFTTDGLLIPVTVVEADANVVLQKKTVATDGYDAIQVGFEDKREKLANK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLL--PVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 G N +PK+ + EFR D+++ VG + F G++VDVTG + GKG+ Sbjct: 63 AELGIVKKANTAPKRFIKEFRY---DEMMSYEVGDKITVDSFVAGEVVDVTGTSKGKGYQ 119 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRH HG S +HR GS G P R+ KK+ G+MG TV+NLEVV+ Sbjct: 120 GVIKRHGQRIGPKGHG-SGAHRIVGSMGPIA-PNRIAPGKKLPGQMGHVTRTVQNLEVVA 177 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 VD + L+L+KG VPG KK I+ KS + GKV+ Sbjct: 178 VDVENNLLLIKGSVPGPKKGLVIV-----KSGIKAAGKVN 212 >gi|94502245|ref|ZP_01308731.1| ribosomal protein L3 [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|161833819|ref|YP_001598015.1| 50S ribosomal subunit protein L3 [Candidatus Sulcia muelleri GWSS] gi|189029486|sp|A8Z668|RL3_SULMW RecName: Full=50S ribosomal protein L3 gi|94451216|gb|EAT14155.1| ribosomal protein L3 [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|152206309|gb|ABS30619.1| 50S ribosomal subunit protein L3 [Candidatus Sulcia muelleri GWSS] Length = 206 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 78/206 (37%), Positives = 128/206 (62%), Gaps = 5/206 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ + +GMT +Y+ G +P +++ C V+ +T +K+GY + Q+G E K KN + Sbjct: 2 SGIIGKNIGMTSMYDESGFNVPCSIIEAGPCIVLQIKTKEKDGYDSCQLGFDEKKYKNTN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ FF +PKKK+FE ++ + + G++ + F +LV++TG + GKGF G Sbjct: 62 KPLLFFFKKFKSTPKKKIFELPIKGN---IKSGNIIKLNCFHENELVNITGFSKGKGFQG 118 Query: 123 AMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH F G+ +HG R+ GS G DP RVFK +MAGRMG +VT+KN +++ Sbjct: 119 VVKRHGFSGVGERSHGQHNRSRAPGSIGAGSDPSRVFKGTRMAGRMGNKKVTLKNRKILK 178 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 +D +++KG VPGA KNS+++++ Sbjct: 179 IDLLNNFLIIKGSVPGA-KNSYLIIK 203 >gi|293363580|ref|ZP_06610336.1| 50S ribosomal protein L3 [Mycoplasma alligatoris A21JP2] gi|292552929|gb|EFF41683.1| 50S ribosomal protein L3 [Mycoplasma alligatoris A21JP2] Length = 277 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 81/210 (38%), Positives = 118/210 (56%), Gaps = 6/210 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT +Y G R+ VTV+ + V + DKNGY+A Q+ + K +K Sbjct: 3 GILGRKVGMTQIYTELGTRVAVTVIEVQPNVVTKVLSSDKNGYVATQLAVFDKKASRSNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ N +PK+ + E R D +G + + F VG LVDVTG + GKGF+G Sbjct: 63 PETGHFAKANTTPKRYVKEVR---DMSGYELGQLVQANIFKVGDLVDVTGTSKGKGFAGT 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRHN +HG + TG D +V K M G++G + TV+NLEVV Sbjct: 120 IKRHNQHIGPKSHGGGGGSQPVRQTGSLGDIAGNKVVKGMTMPGQLGNVKTTVQNLEVVK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD K L+L+KG +PG KK S+++V++ K Sbjct: 180 VDLKNNLLLIKGSIPGPKK-SFVMVKEGVK 208 >gi|168282378|ref|ZP_02690045.1| ribosomal protein L3 [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|182675690|gb|EDT87595.1| ribosomal protein L3 [Ureaplasma parvum serovar 14 str. ATCC 33697] Length = 233 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 82/215 (38%), Positives = 120/215 (55%), Gaps = 11/215 (5%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+S ++ K+GMT V+ G+ + TV++++ +V+ +T +K+GY A+Q+G K K Sbjct: 1 MKS-LLGTKVGMTQVFTETGKAVAATVIYVEPNKVLAVKTNEKDGYSAIQIGYETVKEKA 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+ G F N PK+ + EFR D + VG+ + S F GQLV+ T G GF Sbjct: 60 LNKPLLGQFKKANSDPKRHIKEFR----DAVAEVGAELTVSEFEPGQLVNAQAYTKGHGF 115 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGST----GCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 +G++KRHNF HG HR GS G Q RVFK K+ G G VT KN Sbjct: 116 TGSIKRHNFSMGPMGHGAGYPHRYVGSIAKGRGGSQAQ-RVFKGTKLPGHYGHELVTTKN 174 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 L V+ V LIL+KG +PG K S +L++ + K Sbjct: 175 LLVLDVKANENLILIKGAIPGP-KGSIVLLKSAKK 208 >gi|303282635|ref|XP_003060609.1| predicted protein [Micromonas pusilla CCMP1545] gi|226458080|gb|EEH55378.1| predicted protein [Micromonas pusilla CCMP1545] Length = 215 Score = 131 bits (329), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 83/200 (41%), Positives = 113/200 (56%), Gaps = 6/200 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62 GV K GMT ++ +G +PVTV+ + VV +T +GY AVQVG + ++ Sbjct: 6 GVFGNKAGMTQLFMDDGLCVPVTVIAVQAGNVVTQVKTEGTDGYNAVQVGYDQVADYKIT 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFS 121 KP G + V P + L EFR+++ D P G PS F G +VDV G +IGKG+ Sbjct: 66 KPEVGHCAKAGVPPMRHLEEFRLKEASDHAP-GQQLKPSEMFKEGDVVDVRGTSIGKGWQ 124 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 GA+K++ F THG S SHR HGS G PGR+F KKM +MG VT + L+V+ Sbjct: 125 GAVKKYGFSRGLMTHG-SKSHRQHGSVGAGTSPGRIFPGKKMHSQMGNETVTARKLKVMR 183 Query: 182 VDDKRGLILVKGCVPGAKKN 201 V+D I+VKG VPG + N Sbjct: 184 VEDD--CIIVKGSVPGKRGN 201 >gi|15639182|ref|NP_218628.1| 50S ribosomal protein L3 [Treponema pallidum subsp. pallidum str. Nichols] gi|189025422|ref|YP_001933194.1| 50S ribosomal protein L3 [Treponema pallidum subsp. pallidum SS14] gi|6094076|sp|O83219|RL3_TREPA RecName: Full=50S ribosomal protein L3 gi|226730585|sp|B2S2D6|RL3_TREPS RecName: Full=50S ribosomal protein L3 gi|3322453|gb|AAC65174.1| ribosomal protein L3 (rplC) [Treponema pallidum subsp. pallidum str. Nichols] gi|189017997|gb|ACD70615.1| ribosomal protein L3 [Treponema pallidum subsp. pallidum SS14] gi|291059596|gb|ADD72331.1| 50S ribosomal protein L3 [Treponema pallidum subsp. pallidum str. Chicago] Length = 208 Score = 131 bits (329), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 80/202 (39%), Positives = 117/202 (57%), Gaps = 4/202 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT +++ G PVTV+ +++ VV + +++ GY AV +G G K +SK Sbjct: 3 GLIGQKVGMTQIFDARGCVTPVTVIRVEHNVVVGLKDVERFGYSAVILGTGCMKKSRISK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ + P + + EFR D + VG V + +DV ++ GKGF G Sbjct: 63 PYAGQFAE-RIPPVRVMREFRGFTLD--VSVGQVLDVRVLESVRYLDVCALSKGKGFQGV 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR F G R++HG S HR GSTG PGR FKN KM GRMG RVTV+NL + +D Sbjct: 120 VKRWGFSGGRSSHG-SKFHREAGSTGQCTSPGRTFKNVKMPGRMGAERVTVQNLRIERID 178 Query: 184 DKRGLILVKGCVPGAKKNSWIL 205 G+++V+G VPG K + L Sbjct: 179 VGLGVVMVRGAVPGRNKATVFL 200 >gi|159485314|ref|XP_001700690.1| plastid ribosomal protein L3 [Chlamydomonas reinhardtii] gi|158272032|gb|EDO97839.1| plastid ribosomal protein L3 [Chlamydomonas reinhardtii] Length = 259 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 81/201 (40%), Positives = 112/201 (55%), Gaps = 11/201 (5%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ K GM + +G +P TV+ L+ VV +T D +GY AVQ+G K V+ Sbjct: 45 GVLGTKAGMMSYFTEDGLCVPATVIALEEGNVVTQVKTQDTDGYNAVQIGYKATAEKRVT 104 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKD----DDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 KP G V P + L EF++ KD + P ++ + G+ VD+ G+T+GK Sbjct: 105 KPELGHLKKAGVPPMRHLVEFKL-KDRAAVEAYQPGQALDVAALLKEGEPVDIAGITVGK 163 Query: 119 GFSGAMKR--HNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 GF G +KR H G + +HG S SHR HGS G P RVF KMAG+MG R+TVKN Sbjct: 164 GFQGTIKRWHHKRGAM--SHG-SKSHREHGSIGSATTPSRVFPGLKMAGQMGNVRMTVKN 220 Query: 177 LEVVSVDDKRGLILVKGCVPG 197 ++ VD +R ++VKG VPG Sbjct: 221 QSLLKVDTERHALVVKGSVPG 241 >gi|84997293|ref|XP_953368.1| 50S ribosomal protein L3 [Theileria annulata strain Ankara] gi|65304364|emb|CAI76743.1| 50S ribosomal protein L3, putative [Theileria annulata] Length = 347 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 80/198 (40%), Positives = 113/198 (57%), Gaps = 5/198 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 RSGV+A K+G +++ G R VTV +D C V+ RT++K+GY A+Q+G G +K Sbjct: 88 RSGVLAYKIGCMSLWDDWGVRHAVTVCQVDRCVVLEKRTIEKHGYEALQLGLGYKNIKQQ 147 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SKP G F + K + EF+ D LLP G FS +FT GQ V V+G + KGF Sbjct: 148 SKPNIGRFIKLGTGSKNHIAEFKCS-SDCLLPEGHYFSVRHFTPGQWVFVSGWSKAKGFK 206 Query: 122 GAMKRHNFGGLRATHGVSI-SHRSHGSTGCRQDPGRVFKNKKMAGRMGGN-RVTVKNLEV 179 GAM+R +FGG +HG +H + GS + V++N KM G +G + RVT N V Sbjct: 207 GAMRRWSFGGQNQSHGTECKAHSAPGSISQGKSVHIVWRNTKMGGHVGPDPRVT--NCRV 264 Query: 180 VSVDDKRGLILVKGCVPG 197 ++ R LI +KG +PG Sbjct: 265 FRIETHRNLIFLKGAIPG 282 >gi|149928568|ref|ZP_01916792.1| ribosomal protein L3 [Limnobacter sp. MED105] gi|149822709|gb|EDM81972.1| ribosomal protein L3 [Limnobacter sp. MED105] Length = 126 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 67/121 (55%), Positives = 86/121 (71%), Gaps = 1/121 (0%) Query: 92 LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151 L VG+ S F GQ VDV+G+T GKGFSGA+KRH+F RA+HG SISH + GS G Sbjct: 5 LQVGAAVSAEIFAPGQKVDVSGVTQGKGFSGAIKRHHFSSQRASHGNSISHNAPGSIGMA 64 Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 QDPGRVF K+MAG++G T +NLEVV VD +RGL+L+KG VPG+ K +LV+ + K Sbjct: 65 QDPGRVFPGKRMAGQLGNVNRTTQNLEVVRVDAERGLLLIKGAVPGS-KGGQLLVKPAVK 123 Query: 212 S 212 + Sbjct: 124 A 124 >gi|163804107|ref|ZP_02197891.1| 50S ribosomal protein L3 [Vibrio sp. AND4] gi|159172077|gb|EDP57032.1| 50S ribosomal protein L3 [Vibrio sp. AND4] Length = 148 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 68/136 (50%), Positives = 88/136 (64%), Gaps = 1/136 (0%) Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F+ V + L+EFR++ D++ VG+ + F + VDVTG + GKGF G Sbjct: 1 KAEAGHFAKAGVEAGRGLWEFRLENDEEF-AVGAELTVELFNETKKVDVTGTSKGKGFQG 59 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 60 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 119 Query: 183 DDKRGLILVKGCVPGA 198 D +R L+L+KG VPG+ Sbjct: 120 DAERNLLLIKGAVPGS 135 >gi|15674081|ref|NP_268256.1| 50S ribosomal protein L3 [Lactococcus lactis subsp. lactis Il1403] gi|281492759|ref|YP_003354739.1| 50S ribosomal protein L3P [Lactococcus lactis subsp. lactis KF147] gi|42559688|sp|Q9CDW2|RL3_LACLA RecName: Full=50S ribosomal protein L3 gi|12725153|gb|AAK06197.1|AE006438_11 50S ribosomal protein L3 [Lactococcus lactis subsp. lactis Il1403] gi|281376411|gb|ADA65897.1| LSU ribosomal protein L3P [Lactococcus lactis subsp. lactis KF147] gi|326407632|gb|ADZ64703.1| 50S ribosomal protein L3 [Lactococcus lactis subsp. lactis CV56] Length = 207 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 83/212 (39%), Positives = 122/212 (57%), Gaps = 6/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ ++++ +GY A QVG + Sbjct: 1 MSKGILGKKVGMTQIFTENGELIPVTVIEATPNTVLQVKSVETDGYEATQVGFDTLREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF+ + + VG+ + F G +VDVTG + GKGF Sbjct: 61 TNKPAKGHAAKANTTPKRFVREFKGLEGAE---VGAEITVDTFAAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G +V K KK+AGRMG RVTV+NL + Sbjct: 118 QGPIKRHGQSRGPMAHG-SRYHRRPGSMGPVAA-NKVPKGKKLAGRMGNKRVTVQNLVIA 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ +ILVKG VPGAKK S I+V+ + K+ Sbjct: 176 QVLPEKNVILVKGNVPGAKK-SLIVVKSAIKA 206 >gi|322436546|ref|YP_004218758.1| 50S ribosomal protein L3 [Acidobacterium sp. MP5ACTX9] gi|321164273|gb|ADW69978.1| 50S ribosomal protein L3 [Acidobacterium sp. MP5ACTX9] Length = 242 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 75/207 (36%), Positives = 118/207 (57%), Gaps = 7/207 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVKNVS 62 G++ +K+GMT +++ G PVTVL C + +T+ K+GY A Q+G + K V+ Sbjct: 5 GILGKKIGMTQIFDERGDVHPVTVLKAGPCVITQLKTMAKDGYDAAQIGYVDFVKASKVT 64 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQK---DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 K M G F+ NV P + + E +QK +D + G F + VDV G + G+G Sbjct: 65 KAMNGHFAKANVPPVRMIKEVAIQKASAEDAEVKAGDRILVDIFENERFVDVIGTSKGRG 124 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G ++RH FGG +HG + GS G P RVF ++M G MG ++TV+NL + Sbjct: 125 FAGVIRRHGFGGGPKSHGHMF--QVQGSIGASSFPSRVFPGQRMPGHMGDAQITVRNLRI 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILV 206 ++D + LILV+G VPGA ++ ++L+ Sbjct: 183 RAIDVEDNLILVEGAVPGA-RDGYVLI 208 >gi|225706142|gb|ACO08917.1| Mitochondrial 39S ribosomal protein L3 [Osmerus mordax] Length = 345 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 83/210 (39%), Positives = 119/210 (56%), Gaps = 4/210 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59 R G+VA KLGM V+ G R VT+L + +C V+ H T ++ +G+ A + VG A Sbjct: 93 RVGLVAVKLGMAPVWTKSGERHVVTMLQVQDCHVLKHLTKEEYDGHTAALVVGGRNASPF 152 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++ F V PK+K+ F+V D+ ++ G+ ++F GQ VDVT TIGKG Sbjct: 153 YKTEENMEMFRIAGVPPKQKVTTFKVS-DNAIIKPGTPLHAAHFRPGQYVDVTAKTIGKG 211 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR+ F G A+HG + +HR G++G DP +VFK KKM G MG T L+V Sbjct: 212 FQGVMKRYGFKGQPASHGQTKTHRRPGASGPGGDPAKVFKGKKMPGIMGNIYDTATGLKV 271 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 ++ K ++ V G VPG KN + VRD+ Sbjct: 272 WRINTKHNVLYVHGSVPG-HKNCLVKVRDT 300 >gi|269115073|ref|YP_003302836.1| 50S ribosomal protein L3 [Mycoplasma hominis] gi|268322698|emb|CAX37433.1| 50S ribosomal protein L3 [Mycoplasma hominis ATCC 23114] Length = 268 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 79/214 (36%), Positives = 121/214 (56%), Gaps = 6/214 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT ++ EG+ IPVTV+ + V T +KNGY+A+Q+ + K + K Sbjct: 3 GILGRKVGMTQLFTSEGKLIPVTVVEVKPNVVTKVLTSEKNGYVALQLATEDKKSSRIIK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +F N +PK+ + E R D +G S FT G++VDVT ++ GKGF+G Sbjct: 63 PEVNYFKQANTTPKRFVKEIR---DMSGFSLGDTVDASLFTAGEVVDVTAISKGKGFAGT 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KR N +HG + TG D RV+K M G +G +VTV+NLEVV Sbjct: 120 IKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVWKGMTMPGHLGAEQVTVQNLEVVK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D + ++L+KG VPGA K ++++++ + KS N Sbjct: 180 EDAENNILLIKGSVPGA-KGAFLIIKTAKKSIKN 212 >gi|168308532|ref|ZP_02691207.1| ribosomal protein L3 [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|171902869|gb|EDT49158.1| ribosomal protein L3 [Ureaplasma parvum serovar 1 str. ATCC 27813] Length = 233 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 82/215 (38%), Positives = 119/215 (55%), Gaps = 11/215 (5%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+S ++ K+GMT V+ G+ + TV++++ +V+ +T +K+GY A+Q+G K K Sbjct: 1 MKS-LLGTKVGMTQVFTETGKAVAATVIYVEPNKVLAVKTNEKDGYSAIQIGYETVKEKA 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+ G F N PK+ + EFR D VG+ + S F GQLV+ T G GF Sbjct: 60 LNKPLLGQFKKANSDPKRHIKEFR----DVFAEVGAELTVSEFEPGQLVNAQAYTKGHGF 115 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGST----GCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 +G++KRHNF HG HR GS G Q RVFK K+ G G VT KN Sbjct: 116 TGSIKRHNFSMGPMGHGAGYPHRYVGSIAKGRGGSQAQ-RVFKGTKLPGHYGHELVTTKN 174 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 L V+ V LIL+KG +PG K S +L++ + K Sbjct: 175 LLVLDVKANENLILIKGAIPGP-KGSIVLLKSAKK 208 >gi|125625143|ref|YP_001033626.1| 50S ribosomal protein L3 [Lactococcus lactis subsp. cremoris MG1363] gi|166233151|sp|A2RNQ5|RL3_LACLM RecName: Full=50S ribosomal protein L3 gi|124493951|emb|CAL98946.1| 50S ribosomal protein L3 [Lactococcus lactis subsp. cremoris MG1363] gi|300071951|gb|ADJ61351.1| 50S ribosomal protein L3 [Lactococcus lactis subsp. cremoris NZ9000] Length = 207 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 83/212 (39%), Positives = 122/212 (57%), Gaps = 6/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ ++++ +GY A QVG + Sbjct: 1 MSKGILGKKVGMTQIFTDNGELIPVTVIEATPNTVLQVKSVETDGYEATQVGFDTLREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF+ + + VG+ + F G +VDVTG + GKGF Sbjct: 61 TNKPAKGHAAKANTTPKRFVREFKGLEGAE---VGAEITVDTFAAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G +V K KK+AGRMG RVTV+NL + Sbjct: 118 QGPIKRHGQSRGPMAHG-SRYHRRPGSMGPVAA-NKVPKGKKLAGRMGNKRVTVQNLVIA 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ +ILVKG VPGAKK S I+V+ + K+ Sbjct: 176 QVLPEKNVILVKGNVPGAKK-SLIVVKSAIKA 206 >gi|13357791|ref|NP_078065.1| 50S ribosomal protein L3 [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|167972002|ref|ZP_02554279.1| ribosomal protein L3 [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|170762111|ref|YP_001752314.1| 50S ribosomal protein L3 [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|42559705|sp|Q9PQR0|RL3_UREPA RecName: Full=50S ribosomal protein L3 gi|189029487|sp|B1AIM0|RL3_UREP2 RecName: Full=50S ribosomal protein L3 gi|11276669|pir||H82914 ribosomal protein L3 UU231 [imported] - Ureaplasma urealyticum gi|6899201|gb|AAF30640.1|AE002122_9 ribosomal protein L3 [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827688|gb|ACA32950.1| ribosomal protein L3 [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|186700755|gb|EDU19037.1| ribosomal protein L3 [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 233 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 82/215 (38%), Positives = 120/215 (55%), Gaps = 11/215 (5%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+S ++ K+GMT V+ G+ + TV++++ +V+ +T +K+GY A+Q+G K K Sbjct: 1 MKS-LLGTKVGMTQVFTETGKAVAATVIYVEPNKVLAVKTNEKDGYSAIQIGYETVKEKA 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+ G F N PK+ + EFR D + VG+ + S F GQLV+ T G GF Sbjct: 60 LNKPLLGQFKKANSDPKRHIKEFR----DVVAEVGAELTVSEFEPGQLVNAQAYTKGHGF 115 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGST----GCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 +G++KRHNF HG HR GS G Q RVFK K+ G G VT KN Sbjct: 116 TGSIKRHNFSMGPMGHGAGYPHRYVGSIAKGRGGSQAQ-RVFKGTKLPGHYGHELVTTKN 174 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 L V+ V LIL+KG +PG K S +L++ + K Sbjct: 175 LLVLDVKANENLILIKGAIPGP-KGSIVLLKSAKK 208 >gi|217967369|ref|YP_002352875.1| ribosomal protein L3 [Dictyoglomus turgidum DSM 6724] gi|217336468|gb|ACK42261.1| ribosomal protein L3 [Dictyoglomus turgidum DSM 6724] Length = 215 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 79/201 (39%), Positives = 112/201 (55%), Gaps = 3/201 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RK+GMT ++ G +PVTV+ C V+ RT +K+GY A+Q+G K ++KP Sbjct: 9 ILGRKIGMTQIFTENGEMVPVTVIRGGPCLVLNVRTKEKDGYDAIQLGFERCKESKLNKP 68 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G F + + P + + E RV+ D G F G+ VD+TG + G GF+G + Sbjct: 69 QLGIFKKLGLPPFRIIKEVRVKNPLDYTK-GQEIRVDIFQEGEFVDITGKSKGHGFTGHI 127 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR NF R +HG S HR S G V K +KMAGR G +TV+NL++V VD Sbjct: 128 KRWNFSRGRMSHG-SKFHRRRASIGA-GGVQHVMKGQKMAGRWGNETITVQNLKIVKVDK 185 Query: 185 KRGLILVKGCVPGAKKNSWIL 205 ++ LILVKG VPG N I+ Sbjct: 186 EKDLILVKGAVPGPTGNLLII 206 >gi|255022702|ref|ZP_05294688.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL J1-208] Length = 210 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 78/201 (38%), Positives = 116/201 (57%), Gaps = 4/201 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRR-IPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ RK + ++ IPVTV+ V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGRKXXXXXXFLLKTDELIPVTVIEAAQNVVLQKKTVETDGYEAVQIGFEDKRAI 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP +G + N +PK+ + EFR + D +G+ F G ++D TG++ GKG Sbjct: 61 LSNKPEQGHVAKANTTPKRFIREFR-DVNLDEYEIGAEVKVDVFAEGDIIDATGVSKGKG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KRH HG S HR GS G P RVFKNK + GRMGG ++T++NLE+ Sbjct: 120 FQGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQITIQNLEI 177 Query: 180 VSVDDKRGLILVKGCVPGAKK 200 V VD ++ ++LVKG VPGAKK Sbjct: 178 VKVDVEKNVLLVKGNVPGAKK 198 >gi|77414571|ref|ZP_00790714.1| ribosomal protein L3 [Streptococcus agalactiae 515] gi|77159369|gb|EAO70537.1| ribosomal protein L3 [Streptococcus agalactiae 515] Length = 164 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 79/169 (46%), Positives = 106/169 (62%), Gaps = 6/169 (3%) Query: 45 GYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 GY AVQVG + + +KP +G + N +PK+ + EF K+ + L VG+ S F Sbjct: 1 GYEAVQVGFDDKREVLSNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFE 57 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G +VDVTG + GKGF G +KRH HG S HR GS G P RVFKNK++A Sbjct: 58 AGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGP-VAPNRVFKNKRLA 115 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 GRMGGNRVTV+NLE+V V ++ ++L+KG VPGAKK S I ++ + K+A Sbjct: 116 GRMGGNRVTVQNLEIVQVIPEKNVVLIKGNVPGAKK-SLITIKSAVKAA 163 >gi|167972621|ref|ZP_02554898.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|167988466|ref|ZP_02570137.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|168362040|ref|ZP_02695219.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|195867671|ref|ZP_03079673.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|209553992|ref|YP_002284630.1| 50S ribosomal protein L3 [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550465|ref|ZP_03771414.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551135|ref|ZP_03772081.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|226730586|sp|B5ZB40|RL3_UREU1 RecName: Full=50S ribosomal protein L3 gi|171903367|gb|EDT49656.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209454|gb|EDU06497.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018930|gb|EDU56970.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|195660728|gb|EDX53983.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|209541493|gb|ACI59722.1| 50S ribosomal protein L3 [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225378950|gb|EEH01315.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379619|gb|EEH01981.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 233 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 82/215 (38%), Positives = 120/215 (55%), Gaps = 11/215 (5%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+S ++ K+GMT V+ G+ + TV++++ +V+ +T +K+GY A+Q+G K K Sbjct: 1 MKS-LLGTKVGMTQVFTETGKAVAATVIYVEPNKVLAVKTNEKDGYNAIQIGYETVKEKA 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+ G F N PK+ + EFR D + VG+ + S F GQLV+ T G GF Sbjct: 60 LNKPLLGQFKKANSDPKRHIKEFR----DVVAEVGAELTVSEFEPGQLVNAQAYTKGHGF 115 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGST----GCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 +G++KRHNF HG HR GS G Q RVFK K+ G G VT KN Sbjct: 116 TGSIKRHNFSMGPMGHGAGYPHRYVGSIAKGRGGSQAQ-RVFKGTKLPGHYGHELVTTKN 174 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 L V+ V LIL+KG +PG K S +L++ + K Sbjct: 175 LLVLDVKANENLILIKGAIPGP-KGSIVLLKSAKK 208 >gi|160947700|ref|ZP_02094867.1| hypothetical protein PEPMIC_01635 [Parvimonas micra ATCC 33270] gi|158446834|gb|EDP23829.1| hypothetical protein PEPMIC_01635 [Parvimonas micra ATCC 33270] Length = 208 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 80/211 (37%), Positives = 121/211 (57%), Gaps = 4/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+S ++ +K+GMT ++ +G + VTV+ V +T++ +GY A+Q G + K K Sbjct: 1 MKS-ILGKKIGMTQIFTEDGTVVSVTVVEAGPMFVTQVKTVETDGYNAIQCGYVDKKEKK 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F V+V K+ + EFR+ + + G F G VDV G + GKG Sbjct: 60 VTKPLKGHFDKVSVGYKRFVREFRLN-EGETFETGQEIKVDLFAEGDKVDVIGTSKGKGT 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR N+G HG S SHR G+ PGRV K +K +G+ G + TV+NL VV Sbjct: 119 QGAIKRWNYGRGPEGHG-SKSHRVAGARSAGTYPGRVLKGRKASGKTGNKKSTVQNLVVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD ++ LILVKG +PG K + +R++ K Sbjct: 178 KVDVEKNLILVKGAIPGP-KGGLVTIREAVK 207 >gi|227530205|ref|ZP_03960254.1| ribosomal protein L3 [Lactobacillus vaginalis ATCC 49540] gi|227349880|gb|EEJ40171.1| ribosomal protein L3 [Lactobacillus vaginalis ATCC 49540] Length = 220 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 124/212 (58%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY AVQ+G + + Sbjct: 1 MAKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQIKTVENDGYNAVQLGFDDKREIL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + E R + D + VG F G+ VDVTG+T G G+ Sbjct: 61 SNKPEQGHAAKANTTPKRFIGEIRDAELGDDIKVGDEVKADVFNEGETVDVTGVTKGHGY 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G + + N +HG S HR GS G + RVFK K+ GRMGG VT+++LEVV Sbjct: 121 QGNIHKDNQSRGPMSHG-SRYHRRPGSLGPIIN--RVFKGMKLPGRMGGKTVTMQHLEVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++L+KG VPGA K S++ +++S K+ Sbjct: 178 KVDLDNNVLLIKGNVPGANK-SYVTIKNSVKA 208 >gi|323340374|ref|ZP_08080631.1| 50S ribosomal protein L3 [Lactobacillus ruminis ATCC 25644] gi|323092150|gb|EFZ34765.1| 50S ribosomal protein L3 [Lactobacillus ruminis ATCC 25644] Length = 206 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 80/209 (38%), Positives = 120/209 (57%), Gaps = 8/209 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY A+Q+G + + NV+K Sbjct: 5 GILGKKVGMTQVFTENGELVPVTVVEVGTNVVLQVKTVENDGYNAIQLGFDDQRAVNVNK 64 Query: 64 PMRGFFSSVNVSPKKKLFEFR-VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P +G +PK+ + E R VQ D VG F G +VDVTG + G GF G Sbjct: 65 PAKGHADKAKTAPKRFVREIRDVQGD---YKVGDEVKADLFEAGDIVDVTGTSKGHGFQG 121 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR HG S HR GS G + RV K K + GRMGG RVT++NL++V Sbjct: 122 NIKRWGQSRGPMAHG-SRYHRRPGSMGVIIN--RVMKGKMLPGRMGGKRVTIQNLDIVKA 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D + G++L+KG VPGA K S++ ++ + K Sbjct: 179 DMENGVLLIKGNVPGANK-SYVTIKSTVK 206 >gi|253577179|ref|ZP_04854499.1| 50S ribosomal protein L3 [Paenibacillus sp. oral taxon 786 str. D14] gi|251843423|gb|EES71451.1| 50S ribosomal protein L3 [Paenibacillus sp. oral taxon 786 str. D14] Length = 207 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 115/208 (55%), Gaps = 4/208 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT V+ EG IPVTV+ + V+ + L+ +GY A+Q+G + K +K Sbjct: 3 GILGKKLGMTQVFTPEGNVIPVTVIEASSNVVLQKKDLENDGYEAIQLGYSDKKEARANK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G +PK+ + E R D VG F G+ VDVTG++ GKGF G Sbjct: 63 PEVGHAKKAGTTPKRYVREIR-GVDLAGYEVGQEVKVDIFAEGEFVDVTGISKGKGFQGV 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR HG S HR GS G RVFK K + G MG VT++NLEVV VD Sbjct: 122 IKRWGQSRGPMAHG-SRYHRRPGSMGSIA-ANRVFKGKNLPGHMGHETVTIQNLEVVKVD 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 +R ++LVKG +PG KNS++ V+ + K Sbjct: 180 AERNVLLVKGSIPGP-KNSFVKVKQTTK 206 >gi|167975968|ref|ZP_02558245.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195659702|gb|EDX53082.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 12 str. ATCC 33696] Length = 226 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 80/207 (38%), Positives = 115/207 (55%), Gaps = 10/207 (4%) Query: 9 KLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGF 68 K+GMT V+ G+ + TV++++ +V+ +T +K+GY A+Q+G K K ++KP+ G Sbjct: 1 KVGMTQVFTETGKAVAATVIYVEPNKVLAVKTNEKDGYNAIQIGYETVKEKALNKPLLGQ 60 Query: 69 FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128 F N PK+ + EFR D + VG+ + S F GQLV+ T G GF+G++KRHN Sbjct: 61 FKKANSDPKRHIKEFR----DVVAEVGAELTVSEFEPGQLVNAQAYTKGHGFTGSIKRHN 116 Query: 129 FGGLRATHGVSISHRSHGST----GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 F HG HR GS G Q RVFK K+ G G VT KNL V+ V Sbjct: 117 FSMGPMGHGAGYPHRYVGSIAKGRGGSQAQ-RVFKGTKLPGHYGHELVTTKNLLVLDVKA 175 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211 LIL+KG +PG K S +L++ + K Sbjct: 176 NENLILIKGAIPGP-KGSIVLLKSAKK 201 >gi|286142622|gb|ADC41341.1| ribosomal protein L3 [Streptomyces coelicolor] gi|286142624|gb|ADC41342.1| ribosomal protein L3 [Streptomyces coelescens] gi|286142626|gb|ADC41343.1| ribosomal protein L3 [Streptomyces violaceoruber] gi|286142628|gb|ADC41344.1| ribosomal protein L3 [Streptomyces sp. DSM 40419] gi|286142630|gb|ADC41345.1| ribosomal protein L3 [Streptomyces violaceolatus] gi|286142632|gb|ADC41346.1| ribosomal protein L3 [Streptomyces lividans] gi|286142634|gb|ADC41347.1| ribosomal protein L3 [Streptomyces sp. BTG 4-758] gi|286142636|gb|ADC41348.1| ribosomal protein L3 [Streptomyces sp. BTG 4-759] gi|286142638|gb|ADC41349.1| ribosomal protein L3 [Streptomyces sp. BTG 6-715] gi|286142640|gb|ADC41350.1| ribosomal protein L3 [Streptomyces sp. BTG 6-708] gi|286142642|gb|ADC41351.1| ribosomal protein L3 [Streptomyces sp. BTG 717 I] gi|286142644|gb|ADC41352.1| ribosomal protein L3 [Streptomyces coelicolor] gi|286142646|gb|ADC41353.1| ribosomal protein L3 [Streptomyces sp. BTG 723 I] gi|286142648|gb|ADC41354.1| ribosomal protein L3 [Streptomyces sp. BTG 4-723] gi|286142650|gb|ADC41355.1| ribosomal protein L3 [Streptomyces sp. BTG 4-738] gi|286142652|gb|ADC41356.1| ribosomal protein L3 [Streptomyces coelicolor] gi|286142654|gb|ADC41357.1| ribosomal protein L3 [Streptomyces violaceoruber] Length = 167 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 72/167 (43%), Positives = 97/167 (58%), Gaps = 1/167 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ V RT D +GY +VQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R + +G + F G VDVT + GKGF+G MKRHNF G Sbjct: 61 DVTPRRHLVEIRTAAASEYT-LGQEITAEAFESGVKVDVTAKSKGKGFAGVMKRHNFKGG 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 +A+HG HR GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 KASHGAHRVHRMPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTV 166 >gi|255565958|ref|XP_002523967.1| 50S ribosomal protein L3, putative [Ricinus communis] gi|223536694|gb|EEF38335.1| 50S ribosomal protein L3, putative [Ricinus communis] Length = 285 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 80/199 (40%), Positives = 113/199 (56%), Gaps = 2/199 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGM + +G +PVTV+ +V +T +GY +VQVG + + ++ Sbjct: 71 GVMGTKLGMMSYFESDGTVVPVTVVGFREGNIVTQIKTEATDGYDSVQVGYRRIRDRKLT 130 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G V P + L EFR+Q D + F G LVDV+G+TIGKGF G Sbjct: 131 KPELGHLEKAGVIPMRHLQEFRLQNIDGFEVGQKLVLEEIFKEGDLVDVSGITIGKGFQG 190 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHNF + THG S SHR+ GS G PGRV+K KKM GRMGG + ++ L++V + Sbjct: 191 GIKRHNFKRGQMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKI 249 Query: 183 DDKRGLILVKGCVPGAKKN 201 D+ +++KG +PG N Sbjct: 250 DNDLRAVMIKGALPGKPGN 268 >gi|221220576|gb|ACM08949.1| Mitochondrial 39S ribosomal protein L3 [Salmo salar] Length = 342 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 84/211 (39%), Positives = 118/211 (55%), Gaps = 6/211 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQV--GAGEAKV 58 R G+VA KLGM V+ G R VT+L + +C V+ + + +K +G+ A V G + Sbjct: 91 RVGLVAVKLGMAPVWTKTGERHVVTMLQVQDCHVLNYLSKEKYDGHTAALVVGGKNASPF 150 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 + M F V PK+K+ F+V D+ ++ G+ ++F GQ VDVT TIGK Sbjct: 151 YKTDEEME-MFRLAGVPPKQKVTTFKVS-DNAIIKPGTPLYAAHFRPGQYVDVTAKTIGK 208 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G MKR+ F G A+HG + +HR G++G DP +VFK KKM G MG T L+ Sbjct: 209 GFQGVMKRYGFKGQPASHGQTKTHRRPGASGPGGDPAKVFKGKKMPGMMGNVFDTAHGLK 268 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 V V+ K +I V G VPG KN + VRD+ Sbjct: 269 VWRVNTKYNVIYVHGSVPG-HKNCLLKVRDT 298 >gi|270291133|ref|ZP_06197356.1| 50S ribosomal protein L3 [Pediococcus acidilactici 7_4] gi|304385414|ref|ZP_07367759.1| 50S ribosomal protein L3 [Pediococcus acidilactici DSM 20284] gi|270280529|gb|EFA26364.1| 50S ribosomal protein L3 [Pediococcus acidilactici 7_4] gi|304328621|gb|EFL95842.1| 50S ribosomal protein L3 [Pediococcus acidilactici DSM 20284] Length = 212 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 79/210 (37%), Positives = 119/210 (56%), Gaps = 4/210 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V+ G IPVTV+ V+ +T++ +GY A Q+G + + +K Sbjct: 5 GILGKKVGMTQVFTEAGELIPVTVIDTTPNVVLQLKTVENDGYAAAQLGFDDKRQVLSNK 64 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G + N +PK+ + E R + + + VG + F G VDVTG T G GF G Sbjct: 65 PEQGHVAKANTNPKRFIHEIRDVELGEDVKVGDKIAADIFEAGDFVDVTGTTKGHGFQGV 124 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +K+ HG S HR GS G + RVF KK+ GRMG VT++NLE+V D Sbjct: 125 IKKDGQRRGPMAHG-SRYHRRPGSLGAIIN--RVFPGKKLPGRMGNKTVTIQNLEIVKAD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + ++LVKG VPGAKK S+++V+ + K+ Sbjct: 182 TENNVLLVKGNVPGAKK-SYVVVKSTVKNT 210 >gi|119484833|ref|ZP_01619315.1| 50S ribosomal protein L3 [Lyngbya sp. PCC 8106] gi|119457651|gb|EAW38775.1| 50S ribosomal protein L3 [Lyngbya sp. PCC 8106] Length = 218 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 82/203 (40%), Positives = 110/203 (54%), Gaps = 19/203 (9%) Query: 12 MTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--------VKNVS 62 MT V++ E G IPVTV+ C V +T +GY A+Q+G GE K VK+ Sbjct: 1 MTQVFDAESGIAIPVTVIEAGPCIVTQIKTESTDGYTAIQLGYGEVKNKTRKLNTVKSPG 60 Query: 63 KPMRGFFSSVNVSPKKK--------LFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGM 114 K + + S+ K L E+R++ D +G F GQLVDV+G+ Sbjct: 61 KEVNKYLSNAEQGHLAKSGGQLVRHLREYRIE-DTSSYELGQELKADLFEPGQLVDVSGI 119 Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 ++G+GFSG KRHNF HG S +HR GS G PGRV+ KKMAGR GG ++T Sbjct: 120 SMGRGFSGFQKRHNFRRGPMAHG-SKNHRQPGSIGPGTTPGRVYPGKKMAGRYGGKKITT 178 Query: 175 KNLEVVSVDDKRGLILVKGCVPG 197 L VV +D +R L+L+KG VPG Sbjct: 179 SKLIVVRIDPERNLLLIKGAVPG 201 >gi|145341932|ref|XP_001416053.1| Plastid ribosomal protein L3, imported to chloroplast, large ribosomal subunit [Ostreococcus lucimarinus CCE9901] gi|144576277|gb|ABO94345.1| Plastid ribosomal protein L3, imported to chloroplast, large ribosomal subunit [Ostreococcus lucimarinus CCE9901] Length = 241 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 85/198 (42%), Positives = 109/198 (55%), Gaps = 6/198 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62 G K GMT V+ +G +PVTV+ + + VV +T +GY AVQVG + ++ Sbjct: 26 GAFGSKAGMTQVFTDDGLCVPVTVIAVRDGNVVTQVKTEATDGYNAVQVGYDAVRDDKLT 85 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFS 121 KP G + L EFR+ +D VG+ P+ F G VDV G TIGKGF Sbjct: 86 KPELGHCKKAGAPALRHLEEFRL-RDAPTYEVGAQIKPTELFKEGDKVDVRGRTIGKGFQ 144 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 GA+KR+ F THG S SHR HGS G +PGR++ K+M G MG VT K L VVS Sbjct: 145 GAVKRYGFSRGLMTHG-SKSHRQHGSIGSGTNPGRIYPGKRMHGHMGNEMVTTKGLTVVS 203 Query: 182 VDDKRGLILVKGCVPGAK 199 V+D I+VKG VPG K Sbjct: 204 VEDD--CIIVKGNVPGKK 219 >gi|217073404|gb|ACJ85061.1| unknown [Medicago truncatula] Length = 243 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 76/188 (40%), Positives = 99/188 (52%), Gaps = 2/188 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGM + G +PVTV+ +V +T +GY AVQVG + + ++ Sbjct: 57 GVMGTKLGMMSFFQPNGEVVPVTVVGFKEGNIVTQIKTDATDGYNAVQVGYRRVRDRKLT 116 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G P L EFR+Q D P + F G LVDV+G TIGKGF G Sbjct: 117 KPEMGHLEKAGAIPMHHLQEFRLQSVDGFEPNQRLVFDELFNEGDLVDVSGTTIGKGFQG 176 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHNF +HG S SHR GS G PGRV+K KKM GRMGG + L++V + Sbjct: 177 GIKRHNFKRGPMSHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTNRKTRKLKIVKI 235 Query: 183 DDKRGLIL 190 D +I+ Sbjct: 236 DKDLNVIM 243 >gi|262158450|ref|ZP_06029565.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae INDRE 91/1] gi|262029611|gb|EEY48260.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae INDRE 91/1] Length = 151 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 70/146 (47%), Positives = 94/146 (64%), Gaps = 2/146 (1%) Query: 67 GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKR 126 G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF GA+KR Sbjct: 8 GHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQGAVKR 66 Query: 127 HNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKR 186 NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD +R Sbjct: 67 WNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVDAER 126 Query: 187 GLILVKGCVPGAKKNSWILVRDSFKS 212 L+L+KG VPGA + ++V+ + K+ Sbjct: 127 NLLLIKGAVPGATGGN-VIVKPAVKA 151 >gi|299139130|ref|ZP_07032306.1| 50S ribosomal protein L3 [Acidobacterium sp. MP5ACTX8] gi|298598810|gb|EFI54972.1| 50S ribosomal protein L3 [Acidobacterium sp. MP5ACTX8] Length = 242 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 74/208 (35%), Positives = 120/208 (57%), Gaps = 7/208 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVKNV 61 +G++ +K+GMT +++ G PVTVL + C + +T +GY A Q+G E K + Sbjct: 4 TGILGKKIGMTQLFDDRGDIHPVTVLKVGPCVITQLKTQQTDGYSAAQIGLVEFVKASKI 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFR---VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 +K M G F+ NV P +++ E + V++ ++ G + F + VDV G + G+ Sbjct: 64 NKAMTGHFAKSNVPPVREIREVQIEFVEEGEEAPKAGDRVTVEIFNETRFVDVIGNSKGR 123 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF+G ++RH FGG +HG + GS G P RVF ++M G MG N+VTV+NL Sbjct: 124 GFAGVIRRHGFGGGPKSHGHMF--QVQGSIGASSFPSRVFPGQRMPGHMGTNQVTVRNLR 181 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILV 206 + +D + L+LV+G VPGA ++ ++LV Sbjct: 182 IRGIDVEDNLLLVEGAVPGA-RDGYVLV 208 >gi|41053377|ref|NP_956301.1| 39S ribosomal protein L3, mitochondrial [Danio rerio] gi|33416933|gb|AAH55650.1| Mitochondrial ribosomal protein L3 [Danio rerio] gi|94734481|emb|CAK11310.1| mitochondrial ribosomal protein L3 [Danio rerio] Length = 319 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 87/214 (40%), Positives = 118/214 (55%), Gaps = 12/214 (5%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRT-LDKNGYMAVQVGAGEAKVKN 60 R G+VA KLGM V++ G R VT+L + +C VV H + D NG+ + V G KN Sbjct: 70 RVGLVAIKLGMMPVWSKSGERHVVTMLQVKDCHVVKHLSKEDYNGHTSALVVGG----KN 125 Query: 61 VSKPMRG-----FFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMT 115 VS R F + + PK+KL F V D+ ++ G+ ++F GQ VDVT T Sbjct: 126 VSPFHRPVGYLEIFQNAGIPPKQKLTTFCVT-DNAIIKPGTPLYAAHFRPGQYVDVTAKT 184 Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175 IGKGF G MKR F G A+HG + +HR G+ G DP +VFK KM GRMG T Sbjct: 185 IGKGFQGVMKRWGFKGQPASHGQTKTHRRPGALGPGGDPAKVFKGTKMPGRMGNVYNTNF 244 Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 L++ V+ K ++ V G VPG +N + VRD+ Sbjct: 245 GLKIWRVNTKYNILYVNGSVPG-HRNCLVKVRDT 277 >gi|161723281|ref|NP_758399.2| 50S ribosomal protein L3 [Mycoplasma penetrans HF-2] gi|42559645|sp|Q8EUB3|RL3_MYCPE RecName: Full=50S ribosomal protein L3 Length = 310 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 82/212 (38%), Positives = 118/212 (55%), Gaps = 9/212 (4%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RK+GM + +GRRIPVT++ + V+ ++T +KNGY+A +VG + + K ++KP Sbjct: 4 ILGRKIGMIQSFLEDGRRIPVTIIQAEPNVVLENKTQEKNGYVATKVGFQQIEEKKLNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +G+F + K EFR + VG F G VD +T GKGF+GA+ Sbjct: 64 QKGYFKKIKTDAFKHTKEFR---NVSGYNVGDKILVDIFNSGDKVDAQAITKGKGFTGAI 120 Query: 125 KRHNFGGLRATHGVSISHRSHGST----GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 KR NF HG HR GS G Q RV K +KM+G G VT+ NL VV Sbjct: 121 KRWNFKVGPLGHGAGYPHRYQGSISFGRGGSQGQ-RVPKGQKMSGHYGHELVTISNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 S++ ++ LILVKG VPG NS +L++ + KS Sbjct: 180 SIELEKNLILVKGSVPGP-VNSLVLLKTTVKS 210 >gi|94734480|emb|CAK11309.1| mitochondrial ribosomal protein L3 [Danio rerio] Length = 345 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 87/214 (40%), Positives = 118/214 (55%), Gaps = 12/214 (5%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRT-LDKNGYMAVQVGAGEAKVKN 60 R G+VA KLGM V++ G R VT+L + +C VV H + D NG+ + V G KN Sbjct: 96 RVGLVAIKLGMMPVWSKSGERHVVTMLQVKDCHVVKHLSKEDYNGHTSALVVGG----KN 151 Query: 61 VSKPMRG-----FFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMT 115 VS R F + + PK+KL F V D+ ++ G+ ++F GQ VDVT T Sbjct: 152 VSPFHRPVGYLEIFQNAGIPPKQKLTTFCVT-DNAIIKPGTPLYAAHFRPGQYVDVTAKT 210 Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175 IGKGF G MKR F G A+HG + +HR G+ G DP +VFK KM GRMG T Sbjct: 211 IGKGFQGVMKRWGFKGQPASHGQTKTHRRPGALGPGGDPAKVFKGTKMPGRMGNVYNTNF 270 Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 L++ V+ K ++ V G VPG +N + VRD+ Sbjct: 271 GLKIWRVNTKYNILYVNGSVPG-HRNCLVKVRDT 303 >gi|169350795|ref|ZP_02867733.1| hypothetical protein CLOSPI_01569 [Clostridium spiroforme DSM 1552] gi|169292381|gb|EDS74514.1| hypothetical protein CLOSPI_01569 [Clostridium spiroforme DSM 1552] Length = 242 Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 82/212 (38%), Positives = 122/212 (57%), Gaps = 8/212 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ +G IPVTV+ V+ +T+ +GY A+QVG + + K +K Sbjct: 3 GILGRKIGMTQVFTTDGLLIPVTVVEATENVVLQKKTVATDGYDAIQVGFEDKREKLANK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLL--PVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 G N +PK+ + EFR D+++ VG + F G++VDVTG + GKG+ Sbjct: 63 AELGIVKKANTAPKRFIKEFRF---DEMMSYEVGDKITVDSFVAGEVVDVTGTSKGKGYQ 119 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRH HG S +HR GS G P R+ KK+ G+MG TV+NLE+V+ Sbjct: 120 GVIKRHGQHIGPKGHG-SGAHRIVGSMGPIA-PNRIAPGKKLPGQMGHVTRTVQNLEIVA 177 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + L+L+KG VPG KK ++V+ K+A Sbjct: 178 VDVENNLLLIKGSVPGPKK-GLVIVKSGIKAA 208 >gi|197122296|ref|YP_002134247.1| 50S ribosomal protein L3 [Anaeromyxobacter sp. K] gi|220917078|ref|YP_002492382.1| ribosomal protein L3 [Anaeromyxobacter dehalogenans 2CP-1] gi|226725127|sp|B4UAM2|RL3_ANASK RecName: Full=50S ribosomal protein L3 gi|254803648|sp|B8J817|RL3_ANAD2 RecName: Full=50S ribosomal protein L3 gi|196172145|gb|ACG73118.1| ribosomal protein L3 [Anaeromyxobacter sp. K] gi|219954932|gb|ACL65316.1| ribosomal protein L3 [Anaeromyxobacter dehalogenans 2CP-1] Length = 236 Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 78/204 (38%), Positives = 114/204 (55%), Gaps = 7/204 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG---EAK 57 M +G++A+K+GMT ++ EG +PVTVL C VV +T +K+GY AV +G G E Sbjct: 1 MSTGLLAKKVGMTQIFTPEGDCVPVTVLEAGPCTVVRRKTAEKDGYDAVVIGFGVVDEKH 60 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFS-PSYFTVGQLVDVTGM 114 +SKP G F + + E RV+ L L G V + F Q +DV G+ Sbjct: 61 AHRLSKPEVGVFKKAGTPIFRHVKEIRVKDAKQLGDLKAGDVLTVDKVFKANQRIDVAGV 120 Query: 115 TIGKGFSGAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 T G+GF+G MKR N G R + HR G+ G R+ PG+V+K K + G G + VT Sbjct: 121 TKGRGFTGVMKRWNMKGAARDSSTAHEHHRHVGAIGQRKTPGKVWKGKHLPGHYGVDNVT 180 Query: 174 VKNLEVVSVDDKRGLILVKGCVPG 197 ++NL VV ++ ++ ++LV G VPG Sbjct: 181 IQNLTVVGIEAEQNVLLVSGAVPG 204 >gi|26454475|dbj|BAC44803.1| ribosomal protein L3 [Mycoplasma penetrans HF-2] Length = 326 Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 82/212 (38%), Positives = 118/212 (55%), Gaps = 9/212 (4%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RK+GM + +GRRIPVT++ + V+ ++T +KNGY+A +VG + + K ++KP Sbjct: 20 ILGRKIGMIQSFLEDGRRIPVTIIQAEPNVVLENKTQEKNGYVATKVGFQQIEEKKLNKP 79 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +G+F + K EFR + VG F G VD +T GKGF+GA+ Sbjct: 80 QKGYFKKIKTDAFKHTKEFR---NVSGYNVGDKILVDIFNSGDKVDAQAITKGKGFTGAI 136 Query: 125 KRHNFGGLRATHGVSISHRSHGST----GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 KR NF HG HR GS G Q RV K +KM+G G VT+ NL VV Sbjct: 137 KRWNFKVGPLGHGAGYPHRYQGSISFGRGGSQGQ-RVPKGQKMSGHYGHELVTISNLTVV 195 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 S++ ++ LILVKG VPG NS +L++ + KS Sbjct: 196 SIELEKNLILVKGSVPGP-VNSLVLLKTTVKS 226 >gi|145628334|ref|ZP_01784135.1| 50S ribosomal protein L3 [Haemophilus influenzae 22.1-21] gi|145640870|ref|ZP_01796452.1| 50S ribosomal protein L3 [Haemophilus influenzae R3021] gi|144980109|gb|EDJ89768.1| 50S ribosomal protein L3 [Haemophilus influenzae 22.1-21] gi|145274384|gb|EDK14248.1| 50S ribosomal protein L3 [Haemophilus influenzae 22.4-21] Length = 163 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 70/160 (43%), Positives = 95/160 (59%), Gaps = 2/160 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT ++N +G +PVTV+ ++ +V +TL+ +GY AVQV G K V+K Sbjct: 3 GLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V + L+EFR + ++ +G + F + VDVTG + GKGF G Sbjct: 63 PEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQGG 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 +KR NF ATHG S+SHR GS G Q PGRVFK KK Sbjct: 121 VKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKW 160 >gi|319938507|ref|ZP_08012901.1| 50S ribosomal protein L3 [Coprobacillus sp. 29_1] gi|319806423|gb|EFW03090.1| 50S ribosomal protein L3 [Coprobacillus sp. 29_1] Length = 244 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 81/220 (36%), Positives = 126/220 (57%), Gaps = 12/220 (5%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ +G+ IPVTV+ + V+ +T+ +GY A+QVG + + K +K Sbjct: 3 GILGRKIGMTQVFTTDGKLIPVTVVEATSNVVLQKKTVATDGYDAIQVGFEDKREKLATK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLL--PVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +G + +PK+ + EFR D+++ VG F G++VDVTG + GKG+ Sbjct: 63 AHKGHVAKAETAPKRFIKEFRY---DEMMSYEVGQEIKVDSFVAGEVVDVTGTSKGKGYQ 119 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRH HG S +HR GS G P R+ KK+ G+MG TV+NLE+V+ Sbjct: 120 GVIKRHGQSIGPKGHG-SGAHRIVGSMGPIA-PNRIAPGKKLPGQMGNVTRTVQNLEIVA 177 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 VD + ++L+ G +PG KK ++ K+AV GKV+ Sbjct: 178 VDVENNVLLISGSIPGPKKGLVVV-----KTAVKANGKVN 212 >gi|225710684|gb|ACO11188.1| Mitochondrial 39S ribosomal protein L3 [Caligus rogercresseyi] Length = 342 Score = 127 bits (320), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 83/211 (39%), Positives = 118/211 (55%), Gaps = 6/211 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQV--GAGEAKV 58 R G+VA KLGM V+ G R VT+L + +C V+ + + +K +G+ A V G + Sbjct: 91 RVGLVAVKLGMAPVWTKTGERHVVTMLQVQDCHVLNYLSKEKYDGHTAALVVGGKNASPF 150 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 + M F V PK+K+ F+V D+ ++ G+ ++F GQ VDVT TIGK Sbjct: 151 YKTDEEME-MFRLAGVPPKQKVTTFKVS-DNAIIKPGTPLYAAHFRPGQYVDVTAKTIGK 208 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G MKR+ F G A+HG + +HR G++G DP +VFK KKM G MG T L+ Sbjct: 209 GFQGVMKRYGFKGQPASHGQTKTHRRPGASGPGGDPAKVFKGKKMPGMMGNVFDTAHGLK 268 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 V V+ + +I V G VPG KN + VRD+ Sbjct: 269 VWRVNTRYNVIYVHGSVPG-HKNCLLKVRDT 298 >gi|284042804|ref|YP_003393144.1| 50S ribosomal protein L3 [Conexibacter woesei DSM 14684] gi|283947025|gb|ADB49769.1| 50S ribosomal protein L3 [Conexibacter woesei DSM 14684] Length = 205 Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 79/195 (40%), Positives = 107/195 (54%), Gaps = 3/195 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++A+KLGMT + +GR VTVL C V RT +++GY AVQ+ G + K ++K Sbjct: 4 ILAKKLGMTQRFLEDGRVERVTVLEAGPCPVTAIRTHERDGYEAVQLAFGACREKKLTKA 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G + S + L EFR + + L VG + F GQ V V G + GKGF G + Sbjct: 64 ELGHLKKADASAHRHLVEFRDEAGE--LQVGETVTVEAFEAGQTVKVAGTSKGKGFQGTI 121 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHNF +HG S + R+ GS G P RV K + G+MG RVT K LE+V + Sbjct: 122 KRHNFRRGPKSHG-SHNVRAPGSIGASAWPARVMKGIRGPGQMGNKRVTQKGLEIVEIVS 180 Query: 185 KRGLILVKGCVPGAK 199 K L+LV+G VPG K Sbjct: 181 KDNLMLVRGSVPGPK 195 >gi|323348471|gb|EGA82716.1| Mrpl9p [Saccharomyces cerevisiae Lalvin QA23] Length = 164 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 64/136 (47%), Positives = 92/136 (67%), Gaps = 3/136 (2%) Query: 82 EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSIS 141 E +++K L+P G++ PS+F GQ VDV ++ GKGF+G MKR+ F GLRA+HG SI Sbjct: 6 ELKMKKG--LIPPGTLLKPSFFKEGQYVDVRSVSKGKGFTGVMKRYGFKGLRASHGTSIM 63 Query: 142 HRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKN 201 HR GS G QDPGRV +KM G MG VT++N++V+ VDD+ +I VKG V G KN Sbjct: 64 HRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVLKVDDENNVIWVKGSVAGP-KN 122 Query: 202 SWILVRDSFKSAVNCK 217 S++ ++D+ K ++ + Sbjct: 123 SFVKIQDAIKKNLSIR 138 >gi|81429377|ref|YP_396378.1| 50S ribosomal protein L3 [Lactobacillus sakei subsp. sakei 23K] gi|109893434|sp|Q38UR2|RL3_LACSS RecName: Full=50S ribosomal protein L3 gi|78611020|emb|CAI56072.1| 50S ribosomal protein L3 [Lactobacillus sakei subsp. sakei 23K] Length = 210 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 85/209 (40%), Positives = 120/209 (57%), Gaps = 5/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG + + +K Sbjct: 5 GILGRKVGMTQVFTENGELIPVTVIAATPNVVLQVKTNETDGYEAIQVGFEDKREVLSNK 64 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G + N +PK+ + EFR D VG+ F G +VDVTG+T G GF G Sbjct: 65 PAKGHVAKANTTPKRFIREFRDVALGD-YEVGTEIKVDTFAAGDVVDVTGVTKGHGFQGN 123 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +K+ HG S HR GS G + RVFK K + GRMG N+ TV+NL VVS D Sbjct: 124 IKKDGQSRGPMGHG-SRYHRRPGSMGAVIN--RVFKGKLLPGRMGNNQRTVQNLVVVSTD 180 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 ++ +ILVKG VPGA KNS + ++ + K+ Sbjct: 181 VEKNVILVKGNVPGA-KNSMVTIKTAVKA 208 >gi|116493163|ref|YP_804898.1| 50S ribosomal protein L3P [Pediococcus pentosaceus ATCC 25745] gi|122265373|sp|Q03EB6|RL3_PEDPA RecName: Full=50S ribosomal protein L3 gi|116103313|gb|ABJ68456.1| LSU ribosomal protein L3P [Pediococcus pentosaceus ATCC 25745] Length = 210 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 79/210 (37%), Positives = 122/210 (58%), Gaps = 5/210 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V+ G IPVTV+ V+ +T++ +GY +VQ+G + + +K Sbjct: 5 GILGKKVGMTQVFTEAGELIPVTVIDTTPNVVLQLKTVENDGYSSVQLGFDDKRQVLSNK 64 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G + N +PK+ + E R + D+ VG + F G++VDVTG T G GF G Sbjct: 65 PEQGHVAKANTNPKRFIHEIRNVELGDV-KVGDTIAADIFEAGEIVDVTGTTKGHGFQGV 123 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +K+ HG S HR GS G + RVF KK+ GRMG VT+++LE+V D Sbjct: 124 IKKDGQRRGPMAHG-SRYHRRPGSLGAVIN--RVFPGKKLPGRMGNKTVTIQHLEIVKAD 180 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + ++LVKG VPGAKK S+++V+ + K+ Sbjct: 181 TENNVLLVKGNVPGAKK-SYLVVKSTVKNT 209 >gi|86158411|ref|YP_465196.1| 50S ribosomal protein L3 [Anaeromyxobacter dehalogenans 2CP-C] gi|109893409|sp|Q2IJD0|RL3_ANADE RecName: Full=50S ribosomal protein L3 gi|85774922|gb|ABC81759.1| LSU ribosomal protein L3P [Anaeromyxobacter dehalogenans 2CP-C] Length = 236 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 79/205 (38%), Positives = 115/205 (56%), Gaps = 9/205 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG---EAK 57 M +G++A+K+GMT ++ EG +PVTVL C VV +T +K+GY AV +G G E Sbjct: 1 MSTGLLAKKVGMTQIFTPEGDCVPVTVLEAGPCTVVRRKTAEKDGYDAVVIGFGVVDEKH 60 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLL---PVGSVFS-PSYFTVGQLVDVTG 113 +SKP G F + + E RV KD LL G V + F Q +DV G Sbjct: 61 AHRLSKPEVGVFKKAGTPIFRHVKEIRV-KDAKLLGDLKAGDVLTVDKVFKANQRIDVAG 119 Query: 114 MTIGKGFSGAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 +T G+GF+G MKR N G R + HR G+ G R+ PG+V+K K + G G + + Sbjct: 120 VTKGRGFTGVMKRWNMKGAARDSSTAHEHHRHVGAIGQRKTPGKVWKGKHLPGHYGVDNI 179 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPG 197 T++NL VV ++ ++ ++LV G VPG Sbjct: 180 TIQNLTVVGIEPEQNVLLVSGAVPG 204 >gi|283780374|ref|YP_003371129.1| 50S ribosomal protein L3 [Pirellula staleyi DSM 6068] gi|283438827|gb|ADB17269.1| ribosomal protein L3 [Pirellula staleyi DSM 6068] Length = 232 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 86/233 (36%), Positives = 130/233 (55%), Gaps = 25/233 (10%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT +Y+ G IPVTV+ C+V+ +TL+++GY AVQ+G + + Sbjct: 1 MTKGILGRKVGMTQIYDEAGNAIPVTVVEAGPCRVLQLKTLERDGYEAVQLGFLDKPRRL 60 Query: 61 VSKPMRGFFSSVN-------------------VSPKKKLFEFRVQKDDDLLPVGSVFSPS 101 S+ RG +++ PK+ + EFR D VG + Sbjct: 61 ASRSERGHVAALESKRAKRRAAAGVVAVAKAACEPKRFVREFRGSADG--FTVGQDVTVE 118 Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC---RQDPGRVF 158 + VDVTG++ G+GFSGAMKRHNF G RATHGV HR G TG + GR+ Sbjct: 119 ALEGVKAVDVTGISKGRGFSGAMKRHNFAGQRATHGVKKVHRHMGGTGALASNRGGGRMK 178 Query: 159 KNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 K KKM G+ G R+T +N+++V VD + L+L+ G VPG + + +++R++ K Sbjct: 179 KGKKMPGQYGSARITTRNIKLVRVDKENNLLLINGPVPGP-QGAMVIIRETNK 230 >gi|225716532|gb|ACO14112.1| Mitochondrial 39S ribosomal protein L3 [Esox lucius] Length = 341 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 84/212 (39%), Positives = 115/212 (54%), Gaps = 8/212 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGY----MAVQVGAGEAK 57 R G+VA KLGM V+ G R VT+L + +C V+ + L K Y A+ VG A Sbjct: 91 RVGLVAVKLGMAPVWTKMGDRQVVTLLQVQDCHVL--KYLSKEEYDGHTAALLVGGKNAS 148 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 S+ F V PK+K+ F+V D+ ++ G+ ++F GQ VDVT TIG Sbjct: 149 SFYKSQEEMEMFRFAGVPPKQKISTFKVS-DNAIIKPGTPLYAAHFRPGQYVDVTAKTIG 207 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 GF G MKR+ F G ATHG + +HR G++G DP +VFK +KM GRMG T L Sbjct: 208 MGFQGVMKRYGFKGQPATHGQTKTHRRPGASGPGGDPAKVFKGRKMPGRMGNVFDTAHGL 267 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +V V+ + +I V G VPG +N + V DS Sbjct: 268 KVWRVNTRYNIIYVHGTVPG-HRNCILKVADS 298 >gi|241895187|ref|ZP_04782483.1| 50S ribosomal protein L3 [Weissella paramesenteroides ATCC 33313] gi|241871493|gb|EER75244.1| 50S ribosomal protein L3 [Weissella paramesenteroides ATCC 33313] Length = 208 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 83/209 (39%), Positives = 120/209 (57%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ G IPVTV+ V+ +TL+ +GY A+Q+G + + +K Sbjct: 5 GILGRKVGMTQVFTETGELIPVTVIEATPNVVLQVKTLENDGYSALQLGYQDKRQVLSNK 64 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G + N +PK+ + E R + + VG F G+ VDVTG+T G G+ G Sbjct: 65 PEQGHVAKANTTPKRYIREIRDAEGE--FNVGDEVKVDIFAAGEAVDVTGITKGHGYQGN 122 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +K+ HG S HR GS G + RVFK KK+ GRMG ++ TV+NL+VV VD Sbjct: 123 IKKDGQARGPMAHG-SRYHRRPGSLGAIIN--RVFKGKKLPGRMGNHKRTVQNLQVVRVD 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + +ILVKG VPGA K S + V+ S K+ Sbjct: 180 VENNVILVKGNVPGANK-SLVTVKYSKKA 207 >gi|312870514|ref|ZP_07730633.1| 50S ribosomal protein L3 [Lactobacillus oris PB013-T2-3] gi|311093976|gb|EFQ52301.1| 50S ribosomal protein L3 [Lactobacillus oris PB013-T2-3] Length = 220 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 78/212 (36%), Positives = 122/212 (57%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY AVQ+G + + Sbjct: 1 MAKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQIKTVENDGYNAVQLGFDDKREIL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + E R + D + VG F G+ VDVTG+T G G+ Sbjct: 61 SNKPEQGHAAKANTTPKRFIGEIRDAELGDDIKVGDEVKADVFAEGETVDVTGVTKGHGY 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G + + N HG S HR GS G + RVFK K+ GRMG VT+++L+VV Sbjct: 121 QGNIHKDNQSRGPMAHG-SRYHRRPGSLGAIIN--RVFKGMKLPGRMGNKTVTMQHLQVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++L+KG VPGA K S++ +++S K+ Sbjct: 178 KVDLDNNVLLIKGNVPGANK-SYVTIKNSVKA 208 >gi|94266253|ref|ZP_01289960.1| Ribosomal protein L3 [delta proteobacterium MLMS-1] gi|93453179|gb|EAT03643.1| Ribosomal protein L3 [delta proteobacterium MLMS-1] Length = 209 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 75/198 (37%), Positives = 112/198 (56%), Gaps = 3/198 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V+ G +PVTV+ C V+ +T+ K GY A+QVG G ++K Sbjct: 6 GLLGKKVGMTRVFTETGAAVPVTVIQAGPCVVLQKKTVAKEGYSAIQVGFGPRSEARLNK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKGFSG 122 G + + + EFRV D + +G S +G LVD+ G + G+GF G Sbjct: 66 AEAGHVKAAGKGGFEFVREFRVS-DPEAYQLGQEISVGDLLNIGDLVDIRGKSKGRGFQG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR+ F G RATHG S+ HR+ G+ GC P RV K KKM G+MG +T KN +V + Sbjct: 125 VVKRYGFKGGRATHG-SMFHRAPGAIGCSAWPSRVIKGKKMPGQMGDKYITKKNCTIVDI 183 Query: 183 DDKRGLILVKGCVPGAKK 200 + +I++KG VPG+ + Sbjct: 184 RPESNVIVLKGGVPGSSQ 201 >gi|184155991|ref|YP_001844331.1| 50S ribosomal protein L3 [Lactobacillus fermentum IFO 3956] gi|227515487|ref|ZP_03945536.1| ribosomal protein L3 [Lactobacillus fermentum ATCC 14931] gi|260662752|ref|ZP_05863646.1| 50S ribosomal protein L3 [Lactobacillus fermentum 28-3-CHN] gi|212288403|sp|B2GDW9|RL3_LACF3 RecName: Full=50S ribosomal protein L3 gi|183227335|dbj|BAG27851.1| 50S ribosomal protein L3 [Lactobacillus fermentum IFO 3956] gi|227086100|gb|EEI21412.1| ribosomal protein L3 [Lactobacillus fermentum ATCC 14931] gi|260552833|gb|EEX25832.1| 50S ribosomal protein L3 [Lactobacillus fermentum 28-3-CHN] Length = 220 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 81/214 (37%), Positives = 123/214 (57%), Gaps = 8/214 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ G +PVTV+ + V+ +TL+ +GY AVQ+G + + Sbjct: 1 MTKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQVKTLENDGYSAVQLGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + E R + D + VG + F G+ VDVTG T G G+ Sbjct: 61 SNKPEQGHAAKANTTPKRFIGEIRDAELGDDIKVGDKVAADIFAEGETVDVTGTTKGHGY 120 Query: 121 SGAMKRHNFGGLRA--THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G + H G R HG S HR GS G + VFK KK+ GRMG N TV++L Sbjct: 121 QGNI--HKDGQRRGPMAHG-SRYHRRPGSLGAIIN--HVFKGKKLPGRMGNNTRTVQHLR 175 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +V VD + ++L+KG VPGA K S++ +++S K+ Sbjct: 176 IVKVDTENNVLLIKGNVPGANK-SFVTIKNSVKA 208 >gi|259502531|ref|ZP_05745433.1| 50S ribosomal protein L3 [Lactobacillus antri DSM 16041] gi|259169483|gb|EEW53978.1| 50S ribosomal protein L3 [Lactobacillus antri DSM 16041] Length = 220 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 78/212 (36%), Positives = 122/212 (57%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY AVQ+G + + Sbjct: 1 MAKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQVKTVENDGYNAVQLGFDDKREIL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + E R + D + VG F G+ VDVTG+T G G+ Sbjct: 61 SNKPEQGHAAKANTTPKRFIGEIRDAELGDDIKVGDEVKADVFAEGETVDVTGVTKGHGY 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G + + N HG S HR GS G + RVFK K+ GRMG VT+++L+VV Sbjct: 121 QGNIHKDNQSRGPMAHG-SRYHRRPGSLGAIIN--RVFKGMKLPGRMGNKTVTMQHLQVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++L+KG VPGA K S++ +++S K+ Sbjct: 178 KVDLDNNVLLIKGNVPGANK-SYVTIKNSVKA 208 >gi|206900842|ref|YP_002250701.1| ribosomal protein L3 [Dictyoglomus thermophilum H-6-12] gi|206739945|gb|ACI19003.1| ribosomal protein L3 [Dictyoglomus thermophilum H-6-12] Length = 215 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 80/208 (38%), Positives = 116/208 (55%), Gaps = 4/208 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RK+GMT ++ G IPVTV+ C V+ +T +K+GY A+Q+G K ++KP Sbjct: 9 ILGRKIGMTQIFTDSGELIPVTVIKGGPCLVLNVKTKEKDGYDAIQLGFENCKESKLNKP 68 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G F + + P + + E RV+ D G F G+LVD+TG + G GF+G + Sbjct: 69 QLGIFKKLGLPPFRIIKEVRVKNPLDYTR-GQEIRVDIFQEGELVDITGKSKGHGFTGHI 127 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR F R +HG S HR S G V K +KMAGR G +TV+NL+VV VD Sbjct: 128 KRWGFRRGRMSHG-SKFHRRRASIGA-GGVQHVMKGQKMAGRWGNETITVQNLKVVKVDK 185 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212 ++ +ILVKG VPG N +++R + K Sbjct: 186 EKDIILVKGAVPGPTGN-LLIIRKAVKE 212 >gi|251799642|ref|YP_003014373.1| 50S ribosomal protein L3 [Paenibacillus sp. JDR-2] gi|247547268|gb|ACT04287.1| ribosomal protein L3 [Paenibacillus sp. JDR-2] Length = 207 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 80/209 (38%), Positives = 113/209 (54%), Gaps = 4/209 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT V+ EG +PVTV+ C V+ + + +GY AVQ G + K K Sbjct: 3 GILGKKLGMTQVFTAEGNVVPVTVIEAGPCVVLQKKDQENDGYEAVQFGFSDKKEARAIK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G N +PK+ + E R + VG F G+ VDVTG++ GKGF+G Sbjct: 63 PEIGHAKKANTAPKRYVREIRGINLGE-YEVGQEVKADLFAEGEFVDVTGISKGKGFAGV 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR HG S HR GS G Q RV K K + G MG VT++ LE++ VD Sbjct: 122 IKRWGQSTGPMAHG-SRYHRGPGSMGSIQ-ANRVPKGKHLPGHMGHETVTIQKLEIIRVD 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R +ILVKG +PG KN ++ V+ + K+ Sbjct: 180 AERNVILVKGSIPGP-KNGFVKVKQTVKN 207 >gi|225873078|ref|YP_002754537.1| ribosomal protein L3 [Acidobacterium capsulatum ATCC 51196] gi|225791691|gb|ACO31781.1| ribosomal protein L3 [Acidobacterium capsulatum ATCC 51196] Length = 246 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 73/213 (34%), Positives = 119/213 (55%), Gaps = 12/213 (5%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVKNV 61 +G++ +K+GMT V++ +G P+TVL C + +T K+GY A Q+G E K V Sbjct: 4 TGILGKKIGMTQVFDEKGEVHPITVLQAGPCVITQLKTAAKDGYDAAQIGLVEFVKDSKV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQ--------KDDDLLPVGSVFSPSYFTVGQLVDVTG 113 +KPM+G F+ +V+P + + E V+ + + + G F + VD+ G Sbjct: 64 TKPMKGHFAKSDVAPVRMIKEVDVETAAPSAEGESNGAVKAGDRVLVDIFADEKYVDIIG 123 Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 + G+GF+G ++RH FGG +HG + GS G P RVF ++M G MG +RVT Sbjct: 124 TSKGRGFAGVVRRHGFGGGPKSHGHMF--QVQGSIGASSFPSRVFPGQRMPGHMGTDRVT 181 Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206 V+NL + +D LI+V+G VPG ++ ++L+ Sbjct: 182 VRNLRIRGIDLDENLIMVEGAVPGP-RDGYVLI 213 >gi|156089107|ref|XP_001611960.1| 50S ribosomal protein L3 [Babesia bovis T2Bo] gi|154799214|gb|EDO08392.1| 50S ribosomal protein L3, putative [Babesia bovis] Length = 350 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 81/198 (40%), Positives = 109/198 (55%), Gaps = 5/198 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R GV+A KLG +++ G R VTV H+D C V+ RT+ ++GY AVQ+G G + Sbjct: 91 RCGVLAYKLGCMSLWDDWGERHMVTVCHVDRCVVLEKRTIAEHGYEAVQLGLGYRNINRQ 150 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SK G F V K + EF+ D LLPVG S +FT GQ V V+G + KGF Sbjct: 151 SKQNIGRFIKAGVGSKDHIAEFKC-SSDCLLPVGHYMSVRHFTPGQWVFVSGWSQPKGFQ 209 Query: 122 GAMKRHNFGGLRATHGVSI-SHRSHGSTGCRQDPGRVFKNKKMAGRMGGN-RVTVKNLEV 179 GAM+R +FGG A+HG +H + GS + V++ KM G G + RVT N V Sbjct: 210 GAMRRWHFGGQNASHGTECKAHSAPGSIAQGKSAHIVWRGTKMGGHKGPDPRVT--NCRV 267 Query: 180 VSVDDKRGLILVKGCVPG 197 ++ R LI +KG VPG Sbjct: 268 FRIEAHRNLIFLKGTVPG 285 >gi|227431341|ref|ZP_03913394.1| ribosomal protein L3 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352934|gb|EEJ43107.1| ribosomal protein L3 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 228 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 85/217 (39%), Positives = 120/217 (55%), Gaps = 8/217 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G I VT + V+ + + +GY A+Q+G + + Sbjct: 1 MTKGILGRKVGMTQVFTESGELIAVTAVEATPNVVLQVKNAETDGYGAIQLGYQDKRTVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G S N +PK+ + E R D+ VG F G+ VDVTG+T G GF Sbjct: 61 SNKPEQGHASKANTAPKRYVREIRNAGDE--FNVGDEIKVDTFQAGEYVDVTGITKGHGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR THG S HR GS G + RVFK K + GRMG N+ T++N+ VV Sbjct: 119 QGAIKRLGQSRGPMTHG-SRYHRRPGSMGAIIN--RVFKGKLLPGRMGNNKRTMQNIAVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 VD ++ L+L+KG VPGA K S + V+ + K VN K Sbjct: 176 HVDVEKNLLLLKGNVPGANK-SLLTVKSTVK--VNAK 209 >gi|148927108|ref|ZP_01810738.1| ribosomal protein L3 [candidate division TM7 genomosp. GTL1] gi|147887427|gb|EDK72871.1| ribosomal protein L3 [candidate division TM7 genomosp. GTL1] Length = 180 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 78/181 (43%), Positives = 106/181 (58%), Gaps = 5/181 (2%) Query: 25 VTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFR 84 +T++ C V +T DK+GY AVQ+G GE K N+S + G + V+PK + E R Sbjct: 1 MTLVQAGPCAVTQVKTADKDGYNAVQIGYGEGK--NLSNAVAGHVKAAKVTPKV-IREIR 57 Query: 85 VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRS 144 V + D++ VG F VG VDVTG + GKGF+G +KRHNF + THG + R Sbjct: 58 VNELDEI-KVGDQLGVDLFIVGDNVDVTGTSKGKGFAGTVKRHNFNTSKKTHGGNGYVRK 116 Query: 145 HGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWI 204 GS G P ++FK K+MAGRMG VTVKNL V +D + LI +KG VPG +K + Sbjct: 117 VGSIGSMY-PQKIFKGKRMAGRMGHETVTVKNLSVAYIDAESNLIGLKGAVPGPRKGIVV 175 Query: 205 L 205 + Sbjct: 176 I 176 >gi|47459070|ref|YP_015932.1| 50S ribosomal protein L3 [Mycoplasma mobile 163K] gi|81828477|sp|Q6KI55|RL3_MYCMO RecName: Full=50S ribosomal protein L3 gi|47458399|gb|AAT27721.1| 50S ribosomal protein l3 [Mycoplasma mobile 163K] Length = 297 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 79/212 (37%), Positives = 124/212 (58%), Gaps = 8/212 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVKNVS 62 G++ +K+GMT +Y +G ++PVTV+ + VV H+ + K+GY+A+Q+GA + K + Sbjct: 3 GILGQKIGMTQIYTAQGNKVPVTVIEV-KPNVVTHKFENTKDGYVALQLGAFDQKERKFK 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F N +PK+ + E R + D +G + F G+LVDVTG++ GKGF+G Sbjct: 62 KPEIGHFKKSNTTPKRFVKEIR---NMDGYNLGDLVKADIFKSGELVDVTGISKGKGFAG 118 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180 +KRHN +HG + TG D +V K M G +G + T++NLEVV Sbjct: 119 TIKRHNQKIGPKSHGGGGGSKPVRQTGSIGDIAGNKVLKGMTMPGHLGNVQRTIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD K ++LVKG VPG KN +++++ + K+ Sbjct: 179 KVDIKNNILLVKGSVPGP-KNCFLIIKSAIKN 209 >gi|148544696|ref|YP_001272066.1| 50S ribosomal protein L3 [Lactobacillus reuteri DSM 20016] gi|184154049|ref|YP_001842390.1| 50S ribosomal protein L3 [Lactobacillus reuteri JCM 1112] gi|194466953|ref|ZP_03072940.1| ribosomal protein L3 [Lactobacillus reuteri 100-23] gi|227363819|ref|ZP_03847926.1| ribosomal protein L3 [Lactobacillus reuteri MM2-3] gi|227543623|ref|ZP_03973672.1| ribosomal protein L3 [Lactobacillus reuteri CF48-3A] gi|300909348|ref|ZP_07126809.1| 50S ribosomal protein L3 [Lactobacillus reuteri SD2112] gi|325683030|ref|ZP_08162546.1| 50S ribosomal protein L3 [Lactobacillus reuteri MM4-1A] gi|212288404|sp|A5VLK5|RL3_LACRD RecName: Full=50S ribosomal protein L3 gi|226730527|sp|B2G8X8|RL3_LACRJ RecName: Full=50S ribosomal protein L3 gi|148531730|gb|ABQ83729.1| LSU ribosomal protein L3P [Lactobacillus reuteri DSM 20016] gi|183225393|dbj|BAG25910.1| 50S ribosomal protein L3 [Lactobacillus reuteri JCM 1112] gi|194453989|gb|EDX42886.1| ribosomal protein L3 [Lactobacillus reuteri 100-23] gi|227071176|gb|EEI09492.1| ribosomal protein L3 [Lactobacillus reuteri MM2-3] gi|227186463|gb|EEI66534.1| ribosomal protein L3 [Lactobacillus reuteri CF48-3A] gi|300893213|gb|EFK86572.1| 50S ribosomal protein L3 [Lactobacillus reuteri SD2112] gi|324977380|gb|EGC14331.1| 50S ribosomal protein L3 [Lactobacillus reuteri MM4-1A] Length = 219 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 79/212 (37%), Positives = 122/212 (57%), Gaps = 5/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQIKTVENDGYSAVQLGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + E R + D + VG F G+ VDVTG T G G+ Sbjct: 61 SNKPEQGHAAKANTTPKRFIGEIRDAELGD-IKVGDEVKADVFAEGETVDVTGTTKGHGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G + + N HG S HR GS G + RVFK K+ GRMGG VT+++L+VV Sbjct: 120 QGNIHKDNQSRGPMAHG-SRYHRRPGSLGAIIN--RVFKGMKLPGRMGGKTVTMQHLQVV 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++L+KG VPGA K S++ +++S K+ Sbjct: 177 KVDLDNNVLLIKGNVPGANK-SYVTIKNSVKA 207 >gi|116617329|ref|YP_817700.1| 50S ribosomal protein L3P [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122272470|sp|Q03ZP5|RL3_LEUMM RecName: Full=50S ribosomal protein L3 gi|116096176|gb|ABJ61327.1| LSU ribosomal protein L3P [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 228 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 86/219 (39%), Positives = 121/219 (55%), Gaps = 12/219 (5%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G I VT + V+ + + +GY A+Q+G + + Sbjct: 1 MTKGILGRKVGMTQVFTESGELIAVTAVEATPNVVLQVKNAETDGYSAIQLGYQDKRTVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G S N +PK+ + E R D+ VG F G+ VDVTG+T G GF Sbjct: 61 SNKPEQGHASKANTAPKRYVREIRNAGDE--FNVGDEIKVDTFQAGEYVDVTGITKGHGF 118 Query: 121 SGAMKRHNFGGLRA--THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GA+KR G R THG S HR GS G + RVFK K + GRMG N+ T++N+ Sbjct: 119 QGAIKR--LGQSRGPMTHG-SRYHRRPGSMGAIIN--RVFKGKLLPGRMGNNKRTMQNIA 173 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 +V VD + L+L+KG VPGA K S + V+ + K VN K Sbjct: 174 IVHVDVENNLLLLKGNVPGANK-SLLTVKSTVK--VNAK 209 >gi|42524375|ref|NP_969755.1| 50S ribosomal protein L3 [Bdellovibrio bacteriovorus HD100] gi|81829166|sp|Q6MJ15|RL3_BDEBA RecName: Full=50S ribosomal protein L3 gi|39576584|emb|CAE80748.1| 50S ribosomal protein L3 [Bdellovibrio bacteriovorus HD100] Length = 220 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 77/206 (37%), Positives = 108/206 (52%), Gaps = 1/206 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 +G+ A K GM +YN G +PVTVL + V +T + +GY A+QV K KN + Sbjct: 16 NGLFAFKEGMATIYNENGEAVPVTVLRYEPWFVSQIKTNEADGYEAIQVACHPKKAKNSN 75 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K +G + + Q + VG+ S G V +T + GKGF+G Sbjct: 76 KAEKGHLEKAGFENGAQFVKELRQAAPEGTVVGAQISIDSLAKGDFVKITSKSKGKGFAG 135 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 ++KR F G A+HG S HR GS+G R PGRV KK G +G VTVKN+EVV + Sbjct: 136 SVKRWGFAGGPASHG-SKFHRRPGSSGNRTWPGRVMPGKKFPGHLGAETVTVKNVEVVQI 194 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRD 208 + +++VKG VPGA+ LVR+ Sbjct: 195 IAEENVLMVKGPVPGARNTLVKLVRE 220 >gi|313891553|ref|ZP_07825163.1| 50S ribosomal protein L3 [Dialister microaerophilus UPII 345-E] gi|329121828|ref|ZP_08250443.1| 50S ribosomal protein L3 [Dialister micraerophilus DSM 19965] gi|313120012|gb|EFR43194.1| 50S ribosomal protein L3 [Dialister microaerophilus UPII 345-E] gi|327467766|gb|EGF13258.1| 50S ribosomal protein L3 [Dialister micraerophilus DSM 19965] Length = 213 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 80/193 (41%), Positives = 115/193 (59%), Gaps = 4/193 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ RKLGM+ V+ G +PV+V+ + VV +T++ +GY AVQ+G G K K+ Sbjct: 1 MSKAILGRKLGMSQVFAENGDLVPVSVIEVLPNTVVAVKTVETDGYYAVQLGYGAIKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP++G F V+P K L E R + VG + F G ++DV G++ GKGF Sbjct: 61 LTKPLKGQFEKAGVAPTKFLREHRFS-EKPAYEVGQTLAADIFAEGDVIDVVGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD--PGRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KRHN +HG S +HR S G R G+VFK KKM G MG +RVTV+NL+ Sbjct: 120 AGTIKRHNHQRGPESHG-SKNHRQTASLGARMSGGGGKVFKGKKMPGHMGCDRVTVQNLK 178 Query: 179 VVSVDDKRGLILV 191 VV +D R L+LV Sbjct: 179 VVRIDTARNLMLV 191 >gi|283768462|ref|ZP_06341374.1| 50S ribosomal protein L3 [Bulleidia extructa W1219] gi|283104854|gb|EFC06226.1| 50S ribosomal protein L3 [Bulleidia extructa W1219] Length = 252 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 79/211 (37%), Positives = 119/211 (56%), Gaps = 8/211 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT V+ I+G IPVTV+ + V+ +T + +GY AVQ+G + K + +K Sbjct: 3 GILGRKLGMTQVFTIDGTLIPVTVIDVKPNVVLQKKTKETDGYEAVQLGYEDVKEQRSNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLL--PVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 P G N +PKK + E R D+++ VG+ F G +VDV G + GKG+S Sbjct: 63 PAIGHAKKANTAPKKYIKEIRA---DEMMNFEVGAEVKADLFKAGDVVDVQGTSKGKGYS 119 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCR-QDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G + R+N +HG S HR GS ++ G V K M G+ GG T +NL+V+ Sbjct: 120 GTIVRNNAARGPMSHG-SGHHRHIGSLATNGRNNGVVNKGTAMPGQEGGYTTTNQNLQVI 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + G ILVKG +PG +K ++++ + K Sbjct: 179 KVDAEEGYILVKGNIPGPRK-GLVVIKTTVK 208 >gi|330722458|gb|EGH00293.1| LSU ribosomal protein L3p (L3e) [gamma proteobacterium IMCC2047] Length = 141 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 72/134 (53%), Positives = 88/134 (65%), Gaps = 2/134 (1%) Query: 80 LFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGV 138 L E RV++ D + + VG + F GQ VDVTG + GKGF+G +KR NF ATHG Sbjct: 7 LNESRVEEADLEGVNVGDELTVERFEAGQKVDVTGQSKGKGFAGGVKRWNFKMQDATHGN 66 Query: 139 SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGA 198 SISHR+ GS G Q PGRVFK KKMAG MG +VT + LE+V VD +R LILVKG VPGA Sbjct: 67 SISHRAPGSIGQCQTPGRVFKGKKMAGHMGAAQVTTQGLEIVRVDAERNLILVKGAVPGA 126 Query: 199 KKNSWILVRDSFKS 212 +LVR + K+ Sbjct: 127 PGGD-VLVRPTVKA 139 >gi|269866677|ref|XP_002652354.1| LSU ribosomal protein L3P [Enterocytozoon bieneusi H348] gi|220062674|gb|EED41701.1| LSU ribosomal protein L3P [Enterocytozoon bieneusi H348] Length = 116 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 60/109 (55%), Positives = 82/109 (75%), Gaps = 1/109 (0%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F GQ VDV+G++ GKGF+GA+KRHNF RA+HG S+SHR+ GS GCRQ PGRVFK KK Sbjct: 8 FAEGQRVDVSGVSKGKGFAGAIKRHNFRSNRASHGNSLSHRAPGSIGCRQTPGRVFKGKK 67 Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 MAG +G +VT NLE+V +D R L+++KG VPGA ++ +++R + + Sbjct: 68 MAGHLGAEQVTTLNLELVRIDANRRLLMIKGAVPGA-RDGDVMIRPAVR 115 >gi|194246733|ref|YP_002004372.1| 50S ribosomal protein L3 [Candidatus Phytoplasma mali] gi|254803686|sp|B3QZZ1|RL3_PHYMT RecName: Full=50S ribosomal protein L3 gi|193807090|emb|CAP18528.1| 50S ribosomal protein L3 [Candidatus Phytoplasma mali] Length = 219 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/218 (32%), Positives = 127/218 (58%), Gaps = 9/218 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V++ +G IP+T++ + + ++ +++KNGY++ Q+G + K Sbjct: 1 MAKGILGRKIGMTQVFDEKGSLIPITIVDVSDNVILQQNSVEKNGYLSTQLGFSSKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFR----VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116 +KP G F + SPK+ + E R ++ + L +G+ + F G +VDV G++ Sbjct: 61 STKPALGHFKNAKTSPKRFIKEIRFLPGIKNELSELDLGTSLKTNLFQPGDIVDVIGISK 120 Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 GKGFSG++KRHN +HG R H G K KK+ G+MG VT++N Sbjct: 121 GKGFSGSIKRHNQSEGPKSHG----SRYHRRPGSMGPIKGKIKGKKLPGQMGHQTVTLQN 176 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 L++ S+D ++ L L+KG +PG +K +++++ + K+ + Sbjct: 177 LKINSIDHEQELFLIKGSIPGPRK-GFVMIKTAIKTVI 213 >gi|168038916|ref|XP_001771945.1| predicted protein [Physcomitrella patens subsp. patens] gi|162676727|gb|EDQ63206.1| predicted protein [Physcomitrella patens subsp. patens] Length = 214 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 73/188 (38%), Positives = 101/188 (53%), Gaps = 2/188 (1%) Query: 15 VYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVKNVSKPMRGFFSSVN 73 V+ +G+ +P TV+ +V D +GY AVQVG + + ++KP G + V Sbjct: 11 VFTEDGKAVPCTVVGFHEGNIVTQVKSDATDGYTAVQVGYRRVRDRKLTKPQLGHLNKVG 70 Query: 74 VSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLR 133 P + L EFRV + P + F G L+DV G +IGKGF G +KR+NF + Sbjct: 71 AIPMRHLQEFRVVSAEGYEPNQVLQLEEIFKEGDLIDVVGNSIGKGFQGGIKRYNFARGQ 130 Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKG 193 THG S S R GS G PGRV+ KKM G+MG R ++ LE+V VD + +L+KG Sbjct: 131 MTHG-SKSKRQLGSIGAGTTPGRVYPGKKMPGQMGSGRAKIRKLEIVKVDPELRALLIKG 189 Query: 194 CVPGAKKN 201 VPG N Sbjct: 190 SVPGKPGN 197 >gi|152940799|gb|ABS44864.1| putative 50S ribosomal protein L3 [Oryza sativa Japonica Group] Length = 188 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 67/163 (41%), Positives = 94/163 (57%), Gaps = 1/163 (0%) Query: 39 RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVF 98 +T +GY AVQVG + + +++P G P + L EFR+Q D P + Sbjct: 10 KTAATDGYDAVQVGYHGVREEKLTRPELGHLGKAGAPPLRHLQEFRLQSVDGYDPGQPLD 69 Query: 99 SPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVF 158 F G LVD++G +IGKGF G +KRHNF THG S SHR+ GS G PGRV+ Sbjct: 70 FADMFKEGDLVDISGKSIGKGFQGGIKRHNFKRGLMTHG-SKSHRALGSIGAGTTPGRVY 128 Query: 159 KNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKN 201 K KKM GRMGG + ++ L++V +D+ ++++KG VPG N Sbjct: 129 KGKKMPGRMGGTKTKIRKLKIVKIDNDLKVVMIKGAVPGKPGN 171 >gi|301300208|ref|ZP_07206420.1| 50S ribosomal protein L3 [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852149|gb|EFK79821.1| 50S ribosomal protein L3 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 195 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 78/202 (38%), Positives = 116/202 (57%), Gaps = 9/202 (4%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V+ G +PVTV+ +D+ V+ +T++ +GY A+Q+G + + +KP +G + Sbjct: 1 MTQVFTENGELVPVTVVKVDSNVVLQVKTMENDGYEAIQLGFDDLREVLTNKPAKGHAAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129 N +PK+ + E R D +L VG F G VDVTG + G GF G++KR+ Sbjct: 61 ANTTPKRFVREIR---DVELGEYKVGDEVKADIFEAGDFVDVTGTSKGHGFQGSIKRNGQ 117 Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLI 189 HG S HR GS G + RV K K + GRMGGNRVT++NLE+V D + G++ Sbjct: 118 HRGPMAHG-SRYHRRPGSMGVIIN--RVMKGKLLPGRMGGNRVTIQNLEIVKADTENGVL 174 Query: 190 LVKGCVPGAKKNSWILVRDSFK 211 L+KG VPGA K S + ++ + K Sbjct: 175 LIKGNVPGANK-SLVTIKSTVK 195 >gi|197294631|ref|YP_001799172.1| 50S ribosomal protein L3 [Candidatus Phytoplasma australiense] gi|226730545|sp|B1VAE8|RL3_PHYAS RecName: Full=50S ribosomal protein L3 gi|171853958|emb|CAM11921.1| 50S ribosomal protein L3 [Candidatus Phytoplasma australiense] Length = 221 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 78/215 (36%), Positives = 120/215 (55%), Gaps = 9/215 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++N +G IP+T++ + V+ + + +GY A Q+G + K K Sbjct: 1 MAQGILGKKIGMTQMFNEQGEIIPITIVDVSANVVLQQKNVAIDGYNATQIGFDDKKDKI 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD----DLLPVGSVFSPSYFTVGQLVDVTGMTI 116 +KPM G F +PK+ + E +K++ L VG S F VG LVDVTG + Sbjct: 61 TTKPMLGHFKKAKTTPKRFIKEIIFKKENISSLSALAVGDQVSCDLFQVGDLVDVTGTSK 120 Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 GKGF+G +KRHN THG R H G K KK+ G+MG VT++N Sbjct: 121 GKGFAGVIKRHNQSRGPETHG----SRHHRRPGSMGPIKGKIKGKKLPGQMGHQTVTIQN 176 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 L + SVD+++ L L+KG VPG K +++++ + K Sbjct: 177 LVLFSVDNQKNLFLIKGSVPGPNK-GFVVIKSAVK 210 >gi|31544255|ref|NP_852833.1| 50S ribosomal protein L3 [Mycoplasma gallisepticum str. R(low)] gi|33860197|sp|O52332|RL3_MYCGA RecName: Full=50S ribosomal protein L3 gi|31541099|gb|AAP56401.1| 50S ribosomal protein L3 [Mycoplasma gallisepticum str. R(low)] gi|284930294|gb|ADC30233.1| 50S ribosomal protein L3 [Mycoplasma gallisepticum str. R(high)] gi|284931061|gb|ADC30999.1| 50S ribosomal protein L3 [Mycoplasma gallisepticum str. F] Length = 236 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 82/215 (38%), Positives = 115/215 (53%), Gaps = 12/215 (5%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+ K+GMT V+ GR IPVT++ ++ QVV +T +K+GY AVQ+G + KN++K Sbjct: 3 GIFGTKVGMTQVFEENGRLIPVTLVRVEPNQVVSVKTKEKDGYDAVQLGFNQTDEKNLNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQ---KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 P G F N + K L E R K DLL V +F GQ+VDV T G+GF Sbjct: 63 PQLGHFKKANTNNYKYLEEVRGMVGYKIGDLLKVEELFQE-----GQVVDVQARTKGRGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ---DPGRVFKNKKMAGRMGGNRVTVKNL 177 +GA+KR NF HG HR GS + RV K KKM+G G VT++NL Sbjct: 118 TGAIKRWNFKIGSKGHGAGYPHRFQGSVQAGRGGSQAQRVMKGKKMSGHYGNELVTIQNL 177 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +V + +++ G +PGA NS + + S K+ Sbjct: 178 SIVGFLPEVSSVMISGAIPGA-NNSKVRITTSKKN 211 >gi|94968254|ref|YP_590302.1| 50S ribosomal protein L3 [Candidatus Koribacter versatilis Ellin345] gi|123381602|sp|Q1ISC2|RL3_ACIBL RecName: Full=50S ribosomal protein L3 gi|94550304|gb|ABF40228.1| LSU ribosomal protein L3P [Candidatus Koribacter versatilis Ellin345] Length = 244 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 75/213 (35%), Positives = 116/213 (54%), Gaps = 10/213 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVK 59 M +G++ +K+GMT +++ +G PVTVL C + +T +K+GY A QVG E K Sbjct: 1 MINGLIGKKIGMTQLFDSKGDVRPVTVLQAGPCVITQRKTANKDGYDAAQVGLVEFVKET 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKD-------DDLLPVGSVFSPSYFTVGQLVDVT 112 ++K G ++ P + L EF + D + + VG F + VDVT Sbjct: 61 RLTKAQLGHLGKNDLPPVRTLHEFAIVADGPSEAESNGEVKVGDKVLVDLFEGSKFVDVT 120 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ G+GF+G +KRH F G +HG + GS G P RVFK +MAG MG ++V Sbjct: 121 GVSKGRGFAGVVKRHKFAGGARSHGSMF--QISGSIGSSAFPSRVFKGMRMAGHMGQDQV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWIL 205 TV+NL ++ +D L++V+G VPG K + + Sbjct: 179 TVRNLRILGIDKDENLLVVEGAVPGPKDATVFI 211 >gi|229552708|ref|ZP_04441433.1| ribosomal protein L3 [Lactobacillus rhamnosus LMS2-1] gi|258509482|ref|YP_003172233.1| 50S ribosomal protein L3 [Lactobacillus rhamnosus GG] gi|258540679|ref|YP_003175178.1| 50S ribosomal protein L3 [Lactobacillus rhamnosus Lc 705] gi|229313914|gb|EEN79887.1| ribosomal protein L3 [Lactobacillus rhamnosus LMS2-1] gi|257149409|emb|CAR88382.1| LSU/50S ribosomal protein L3P [Lactobacillus rhamnosus GG] gi|257152355|emb|CAR91327.1| LSU/50S ribosomal protein L3P [Lactobacillus rhamnosus Lc 705] gi|259650761|dbj|BAI42923.1| 50S ribosomal protein L3 [Lactobacillus rhamnosus GG] Length = 210 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 78/212 (36%), Positives = 121/212 (57%), Gaps = 5/212 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY AVQ+G G+ + Sbjct: 3 RKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQVKTVESDGYEAVQLGYGDMREVLT 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G + +PK+ + E R D VGS F G +VDVTG + G G+ Sbjct: 63 NKPSVGHAKKADTTPKRFVREIRDVALSD-YEVGSEVKADEFAAGDIVDVTGTSKGHGYQ 121 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +K+ HG S HR GS G + +VFK KK+ GRMG + T++NL+VV+ Sbjct: 122 GNIKKDGQSRGPMAHG-SRYHRRPGSLGAIIN--KVFKGKKLPGRMGNHTRTMQNLQVVA 178 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + ++L+KG VPGA K S++ +R + K+A Sbjct: 179 ADTEHNVLLIKGNVPGANK-SFVTIRSAVKAA 209 >gi|199598832|ref|ZP_03212243.1| Ribosomal protein L3 [Lactobacillus rhamnosus HN001] gi|199590244|gb|EDY98339.1| Ribosomal protein L3 [Lactobacillus rhamnosus HN001] Length = 210 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 78/212 (36%), Positives = 121/212 (57%), Gaps = 5/212 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY AVQ+G G+ + Sbjct: 3 RKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQVKTVESDGYEAVQLGYGDLREVLT 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G + +PK+ + E R D VGS F G +VDVTG + G G+ Sbjct: 63 NKPSVGHAKKADTTPKRFVREIRDVALSD-YEVGSEVKADEFAAGDIVDVTGTSKGHGYQ 121 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +K+ HG S HR GS G + +VFK KK+ GRMG + T++NL+VV+ Sbjct: 122 GNIKKDGQSRGPMAHG-SRYHRRPGSLGAIIN--KVFKGKKLPGRMGNHTRTMQNLQVVA 178 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + ++L+KG VPGA K S++ +R + K+A Sbjct: 179 ADTEHNVLLIKGNVPGANK-SFVTIRSAVKAA 209 >gi|2766503|gb|AAB95387.1| ribosomal protein L3 [Mycoplasma gallisepticum] Length = 236 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 82/215 (38%), Positives = 115/215 (53%), Gaps = 12/215 (5%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+ K+GMT V+ GR IPVT++ ++ QVV +T +K+GY AVQ+G + KN++K Sbjct: 3 GIFGTKVGMTQVFEENGRLIPVTLVRVEPNQVVSVKTKEKDGYDAVQLGFNQTDEKNLNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQ---KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 P G F N + K L E R K DLL V +F GQ+VDV T G+GF Sbjct: 63 PELGHFKKANTNNYKYLEEVRGMVGYKVGDLLKVEELFQE-----GQVVDVQARTKGRGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ---DPGRVFKNKKMAGRMGGNRVTVKNL 177 +GA+KR NF HG HR GS + RV K KKM+G G VT++NL Sbjct: 118 TGAIKRWNFKIGSKGHGAGYPHRFQGSVQAGRGGSQAQRVMKGKKMSGHYGNELVTIQNL 177 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +V + +++ G +PGA NS + + S K+ Sbjct: 178 SIVGFLPEVSSVMISGAIPGA-NNSKVRITTSKKN 211 >gi|87306538|ref|ZP_01088685.1| 50S ribosomal protein L3 [Blastopirellula marina DSM 3645] gi|87290717|gb|EAQ82604.1| 50S ribosomal protein L3 [Blastopirellula marina DSM 3645] Length = 217 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 76/203 (37%), Positives = 108/203 (53%), Gaps = 17/203 (8%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V++ G IPVTV+ C V+ ++ +++GY AVQ+G + + ++ RG + Sbjct: 1 MTQVFDESGNIIPVTVIEAGPCHVLQLKSQERDGYEAVQLGFDDKPRRLANRSERGQVAP 60 Query: 72 VNVSPKKKLFEFRVQKD--DDLLPVGSVF----SPSYFTVGQ-----------LVDVTGM 114 ++ KKL V+ D P V S F +GQ VD+ G Sbjct: 61 LSSKRAKKLAAAGVEASAKPDCEPKRFVRELRGSTEGFEIGQEVSVGVLSDVKAVDIVGT 120 Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 + G+G++G MKRHNF G RATHGV HR G TGC P R FK M+G+ G +VT Sbjct: 121 SKGRGYAGVMKRHNFAGQRATHGVKKVHRHTGGTGCSAYPSRTFKGLNMSGQYGNAKVTQ 180 Query: 175 KNLEVVSVDDKRGLILVKGCVPG 197 +N++VV VD++ LILV G PG Sbjct: 181 RNVKVVKVDEENNLILVYGAAPG 203 >gi|282852649|ref|ZP_06261991.1| 50S ribosomal protein L3 [Lactobacillus gasseri 224-1] gi|282556391|gb|EFB62011.1| 50S ribosomal protein L3 [Lactobacillus gasseri 224-1] Length = 209 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 85/213 (39%), Positives = 120/213 (56%), Gaps = 5/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ G +PVTV+ V+ +T + +GY AVQVG + + Sbjct: 1 MTKGILGRKVGMTQIFTKNGILVPVTVIEATPNVVLQVKTNESDGYEAVQVGYQDMREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + SPK+ + E R + D VGS + F+ G +VDVTG T G G Sbjct: 61 SNKPAKGHAAKAKTSPKRFIREIRDVELKD-YEVGSEITVDSFSEGDVVDVTGTTRGHGT 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR THG S HR GS G + RV K KK+ G MGG +VTV+NL + Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSIIN--RVPKGKKLPGHMGGKKVTVQNLVIE 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ ++LVKG VPGA KNS I V+ + K+A Sbjct: 177 KVAPEKNVLLVKGNVPGA-KNSLIFVKSAAKAA 208 >gi|237733228|ref|ZP_04563709.1| 50S ribosomal protein L3 [Mollicutes bacterium D7] gi|229383609|gb|EEO33700.1| 50S ribosomal protein L3 [Coprobacillus sp. D7] Length = 232 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 83/212 (39%), Positives = 118/212 (55%), Gaps = 12/212 (5%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V+ +G IPVTV+ D V+ +T+ +GY A+QVG + + K +K G Sbjct: 1 MTQVFTTDGLLIPVTVVEADANVVLQKKTVATDGYDAIQVGFEDKREKLANKAELGIVKK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLL--PVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129 N +PK+ + EFR D+++ VG + F G++VDVTG + GKG+ G +KRH Sbjct: 61 ANTAPKRFIKEFRY---DEMMSYEVGDKITVDSFVAGEVVDVTGTSKGKGYQGVIKRHGQ 117 Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLI 189 HG S +HR GS G P R+ KK+ G+MG TV+NLEVV+VD + L+ Sbjct: 118 RIGPKGHG-SGAHRIVGSMGPIA-PNRIAPGKKLPGQMGHVTRTVQNLEVVAVDVENNLL 175 Query: 190 LVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 L+KG VPG KK I+ KS + GKV+ Sbjct: 176 LIKGSVPGPKKGLVIV-----KSGIKAAGKVN 202 >gi|307103242|gb|EFN51504.1| hypothetical protein CHLNCDRAFT_48352 [Chlorella variabilis] Length = 215 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 83/200 (41%), Positives = 104/200 (52%), Gaps = 6/200 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-RTLDKNGYMAVQVGAGEAKVKNVS 62 GV K GM + +G +P TV+ L+ +V H +T +K+GY AVQVG + ++ Sbjct: 6 GVWGTKAGMMQFFK-DGASLPATVIALEGGNIVTHVKTAEKDGYTAVQVGYKTCREDKIT 64 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKGFS 121 KP G K L EF+V KD G + F G +VDV G TIGKGF Sbjct: 65 KPELGHLQKAGAPAMKHLREFKV-KDASGYEAGQQLNLVDMFKAGDMVDVAGTTIGKGFQ 123 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F THG S S R HGSTG PGRVF K AG+MG R +K EV+ Sbjct: 124 GGIKRWGFARGNMTHG-SKSKREHGSTGPGSSPGRVFPGLKAAGQMGNVRRKLK-AEVLL 181 Query: 182 VDDKRGLILVKGCVPGAKKN 201 VD + I+VKG VPG N Sbjct: 182 VDAENSAIVVKGSVPGKPGN 201 >gi|786153|dbj|BAA08831.1| ribosomal protein L3 [Bacillus subtilis] Length = 162 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 74/165 (44%), Positives = 102/165 (61%), Gaps = 4/165 (2%) Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107 A+Q+G + + K +KP +G + +PK+ + E R + D VG F+ G+ Sbjct: 1 AIQLGFDDKREKLSNKPEKGHVAKAETAPKRFVKELR-GVEMDAYEVGQEVKVEIFSAGE 59 Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167 +VDVTG++ GKGF GA+KRH +HG S HR GS G DP RVFK K + GRM Sbjct: 60 IVDVTGVSKGKGFQGAIKRHGQSRGPMSHG-SRYHRRPGSMGP-VDPNRVFKGKLLPGRM 117 Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 GG ++TV+NLE+V VD +R L+L+KG VPGAKK S I V+ + KS Sbjct: 118 GGEQITVQNLEIVKVDAERNLLLIKGNVPGAKK-SLITVKSAVKS 161 >gi|320108396|ref|YP_004183986.1| 50S ribosomal protein L3 [Terriglobus saanensis SP1PR4] gi|319926917|gb|ADV83992.1| 50S ribosomal protein L3 [Terriglobus saanensis SP1PR4] Length = 242 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 114/209 (54%), Gaps = 6/209 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVKNV 61 +G++ RK+GMT V++ G P+TV+ C + +T+ K+GY A Q+G E K + Sbjct: 4 TGILGRKIGMTQVFDERGDVHPITVIKAGPCVITQLKTMQKDGYEAAQIGLVEFVKASKI 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQ---KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 +K M G F+ +V P K + E + + ++ + G F + VDV G + G+ Sbjct: 64 NKAMTGHFAKSSVPPVKIIREVPFEASAEGEEAVKSGDRVLIDIFENAKFVDVIGTSKGR 123 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF+G ++RH FGG +HG + GS G P RVF ++M G MG ++TV+NL Sbjct: 124 GFAGVIRRHGFGGGPKSHGHMF--QVQGSIGASSFPSRVFPGQRMPGHMGAAQITVRNLR 181 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVR 207 + +D + LI+V+G VPG + ++ R Sbjct: 182 IRGIDLEDNLIMVEGAVPGPRDGVVLVSR 210 >gi|72080533|ref|YP_287591.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae 7448] gi|109893525|sp|Q4A8H1|RL3_MYCH7 RecName: Full=50S ribosomal protein L3 gi|71913657|gb|AAZ53568.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae 7448] Length = 230 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 77/220 (35%), Positives = 121/220 (55%), Gaps = 7/220 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GM+ ++ EG IPV+++ + V T +KN Y A+Q+ A + K K Sbjct: 3 GILGKKVGMSQLFTTEGIAIPVSIIEVPENIVTKIITKEKNSYNAIQLAAFDKKQSRFLK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ N PK+ + EFR D +G S F+ G+ VDVTG + GKGF+G Sbjct: 63 PEIGHFAKANTKPKRFIKEFR---DFQGYKLGQTVDVSIFSPGEFVDVTGTSKGKGFAGT 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KR+N +HG + TG D +V K M GR+G +VT ++LE++ Sbjct: 120 IKRYNQAIGPRSHGGGGGSKPIRQTGSLGDISGNKVVKGMTMPGRLGHEKVTKQSLEIIK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 VD + L+++KG VPG KK S+++++ + K N K VS Sbjct: 180 VDKENNLLVLKGSVPGPKK-SFLVIKSAIKKP-NPKNPVS 217 >gi|116628963|ref|YP_814135.1| 50S ribosomal protein L3 [Lactobacillus gasseri ATCC 33323] gi|238853483|ref|ZP_04643861.1| 50S ribosomal protein L3 [Lactobacillus gasseri 202-4] gi|122274039|sp|Q046C5|RL3_LACGA RecName: Full=50S ribosomal protein L3 gi|116094545|gb|ABJ59697.1| LSU ribosomal protein L3P [Lactobacillus gasseri ATCC 33323] gi|238833923|gb|EEQ26182.1| 50S ribosomal protein L3 [Lactobacillus gasseri 202-4] Length = 209 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 85/213 (39%), Positives = 120/213 (56%), Gaps = 5/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ G +PVTV+ V+ +T + +GY AVQVG + + Sbjct: 1 MTKGILGRKVGMTQIFTKNGILVPVTVIEATPNVVLQVKTNESDGYEAVQVGYQDMREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + SPK+ + E R + D VGS + F+ G +VDVTG T G G Sbjct: 61 SNKPAKGHAAKAKTSPKRFIREIRDVELKD-YEVGSEITVDSFSEGDVVDVTGTTRGHGT 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR THG S HR GS G + RV K KK+ G MGG +VTV+NL + Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSIIN--RVPKGKKLPGHMGGKKVTVQNLVIE 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ ++LVKG VPGA KNS I V+ + K+A Sbjct: 177 KVVPEKNVLLVKGNVPGA-KNSLIFVKSAAKAA 208 >gi|42518429|ref|NP_964359.1| 50S ribosomal protein L3 [Lactobacillus johnsonii NCC 533] gi|268318851|ref|YP_003292507.1| ribosomal protein L3 [Lactobacillus johnsonii FI9785] gi|300362389|ref|ZP_07058565.1| 50S ribosomal protein L3 [Lactobacillus gasseri JV-V03] gi|81832300|sp|Q74L88|RL3_LACJO RecName: Full=50S ribosomal protein L3 gi|41582714|gb|AAS08325.1| 50S ribosomal protein L3 [Lactobacillus johnsonii NCC 533] gi|262397226|emb|CAX66240.1| ribosomal protein L3 [Lactobacillus johnsonii FI9785] gi|300353380|gb|EFJ69252.1| 50S ribosomal protein L3 [Lactobacillus gasseri JV-V03] gi|329666692|gb|AEB92640.1| 50S ribosomal protein L3 [Lactobacillus johnsonii DPC 6026] Length = 209 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 84/213 (39%), Positives = 120/213 (56%), Gaps = 5/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ G +PVTV+ V+ +T + +GY AVQVG + + Sbjct: 1 MTKGILGRKVGMTQIFTKNGILVPVTVIEATPNVVLQVKTNESDGYEAVQVGYQDMREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + SPK+ + E R + D VGS + F+ G +VDVTG T G G Sbjct: 61 SNKPAKGHAAKAKTSPKRFIREIRDVELKD-YEVGSEITVDSFSEGDVVDVTGTTRGHGT 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR THG S HR GS G + RV K KK+ G MGG +VTV+NL + Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSIIN--RVPKGKKLPGHMGGKKVTVQNLVIE 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ ++L+KG VPGA KNS I V+ + K+A Sbjct: 177 KVVPEKNVLLIKGNVPGA-KNSLIFVKSAAKAA 208 >gi|71893546|ref|YP_278992.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae J] gi|109893526|sp|Q4AAE0|RL3_MYCHJ RecName: Full=50S ribosomal protein L3 gi|71851673|gb|AAZ44281.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae J] Length = 230 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 77/220 (35%), Positives = 121/220 (55%), Gaps = 7/220 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GM+ ++ EG IPV+++ + V T +KN Y A+Q+ A + K K Sbjct: 3 GILGKKVGMSQLFTTEGIAIPVSIIEVPENIVTKIITKEKNSYDAIQLAAFDKKQSRFLK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ N PK+ + EFR D +G S F+ G+ VDVTG + GKGF+G Sbjct: 63 PEIGHFAKANTKPKRFIKEFR---DFQGYKLGQTVDVSIFSPGEFVDVTGTSKGKGFAGT 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KR+N +HG + TG D +V K M GR+G +VT ++LE++ Sbjct: 120 IKRYNQAIGPRSHGGGGGSKPIRQTGSLGDISGNKVVKGMTMPGRLGHEKVTKQSLEIIK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 VD + L+++KG VPG KK S+++++ + K N K VS Sbjct: 180 VDKENNLLVLKGSVPGPKK-SFLVIKSAIKKP-NPKNPVS 217 >gi|227888853|ref|ZP_04006658.1| 50S ribosomal protein L3 [Lactobacillus johnsonii ATCC 33200] gi|227850690|gb|EEJ60776.1| 50S ribosomal protein L3 [Lactobacillus johnsonii ATCC 33200] Length = 209 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 84/213 (39%), Positives = 120/213 (56%), Gaps = 5/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ G +PVTV+ V+ +T + +GY AVQVG + + Sbjct: 1 MTKGILGRKVGMTQIFTKNGVLVPVTVIEATPNVVLQVKTNESDGYEAVQVGYQDMREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + SPK+ + E R + D VGS + F+ G +VDVTG T G G Sbjct: 61 SNKPAKGHAAKAKTSPKRFIREIRDVELKD-YEVGSEITVDSFSEGDVVDVTGTTRGHGT 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR THG S HR GS G + RV K KK+ G MGG +VTV+NL + Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSIIN--RVPKGKKLPGHMGGKKVTVQNLVIE 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ ++L+KG VPGA KNS I V+ + K+A Sbjct: 177 KVVPEKNVLLIKGNVPGA-KNSLIFVKSAAKAA 208 >gi|312601074|gb|ADQ90329.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae 168] Length = 230 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 77/220 (35%), Positives = 121/220 (55%), Gaps = 7/220 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GM+ ++ EG IPV+++ + V T +KN Y A+Q+ A + K K Sbjct: 3 GILGKKVGMSQLFTTEGIAIPVSIIEVPENIVTKIITKEKNSYDAIQLAAFDKKQSRFLK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ N PK+ + EFR D +G S F+ G+ VDVTG + GKGF+G Sbjct: 63 PEIGHFAKANTKPKRFIKEFR---DFQGYKLGQTVDVSIFSPGEFVDVTGTSKGKGFAGT 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KR+N +HG + TG D +V K M GR+G +VT ++LE++ Sbjct: 120 IKRYNQAIGPRSHGGGGGSKPIRQTGSLGDISGNKVVKGMTMPGRLGHEKVTKQSLEIIK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 VD + L+++KG VPG KK S+++++ + K N K VS Sbjct: 180 VDKENNLLVLKGSVPGPKK-SFLVIKSAIKKP-NPKNPVS 217 >gi|116327224|ref|YP_796944.1| 50S ribosomal protein L3 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116327264|ref|YP_796984.1| 50S ribosomal protein L3 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116332122|ref|YP_801840.1| 50S ribosomal protein L3 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122280148|sp|Q04PT8|RL3_LEPBJ RecName: Full=50S ribosomal protein L3 gi|122284929|sp|Q055E4|RL3_LEPBL RecName: Full=50S ribosomal protein L3 gi|116119968|gb|ABJ78011.1| 50S Ribosomal protein L3 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116120008|gb|ABJ78051.1| 50S Ribosomal protein L3 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125811|gb|ABJ77082.1| 50S Ribosomal protein L3 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 206 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/199 (36%), Positives = 110/199 (55%), Gaps = 4/199 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GM+ +++ +G IPVTVL + C V ++++ +GY A+Q+ + K Sbjct: 1 MAKGLIGKKVGMSQIFDEQGNIIPVTVLEVGPCAVSQVKSVENDGYEAIQLAFQDTKEFQ 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKG 119 +SK + + ++ PKK L EFR D GSV F V +V VTG++ G+G Sbjct: 61 ISKAEKNHLAKASLGPKKVLREFRSFGDSPA--TGSVLKVQDIFAVSDVVKVTGVSKGRG 118 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KRH S HR GS G P RVFK K+ GR G + TV+NL+V Sbjct: 119 FQGVVKRHG-HAGGPGGHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQQTTVRNLKV 177 Query: 180 VSVDDKRGLILVKGCVPGA 198 V +++++ L+ V G VPG Sbjct: 178 VRINEEKNLVFVSGAVPGT 196 >gi|301774558|ref|XP_002922699.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like [Ailuropoda melanoleuca] Length = 348 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 81/212 (38%), Positives = 118/212 (55%), Gaps = 9/212 (4%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59 R G++A KLGM ++ +GR+ VT+L + +C V+ + + NG MA + VG A Sbjct: 96 RVGLIALKLGMMPLWTKDGRKHVVTLLQVQDCHVLKYTPKENHNGKMAALTVGGKTASRF 155 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + S + F+ + + PK+K+ F V D+ ++ G+ ++F GQ VDVT TIGKG Sbjct: 156 HKSTSVLEFYQELGLPPKQKVKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 214 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 F G MKR F G ATHG + +HR G STG D R++ KM G+MG T L Sbjct: 215 FQGVMKRWGFKGQPATHGQTKTHRRPGAISTG---DVARIWPGTKMPGQMGNRDRTAYGL 271 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +V ++ K +I V G VPG KN + +RDS Sbjct: 272 KVWRINTKHNVIYVNGSVPG-HKNCLVKIRDS 302 >gi|281351379|gb|EFB26963.1| hypothetical protein PANDA_011694 [Ailuropoda melanoleuca] Length = 317 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 81/212 (38%), Positives = 118/212 (55%), Gaps = 9/212 (4%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59 R G++A KLGM ++ +GR+ VT+L + +C V+ + + NG MA + VG A Sbjct: 66 RVGLIALKLGMMPLWTKDGRKHVVTLLQVQDCHVLKYTPKENHNGKMAALTVGGKTASRF 125 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + S + F+ + + PK+K+ F V D+ ++ G+ ++F GQ VDVT TIGKG Sbjct: 126 HKSTSVLEFYQELGLPPKQKVKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 184 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 F G MKR F G ATHG + +HR G STG D R++ KM G+MG T L Sbjct: 185 FQGVMKRWGFKGQPATHGQTKTHRRPGAISTG---DVARIWPGTKMPGQMGNRDRTAYGL 241 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +V ++ K +I V G VPG KN + +RDS Sbjct: 242 KVWRINTKHNVIYVNGSVPG-HKNCLVKIRDS 272 >gi|149632093|ref|XP_001514282.1| PREDICTED: similar to Mitochondrial ribosomal protein L3 [Ornithorhynchus anatinus] Length = 429 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 79/211 (37%), Positives = 116/211 (54%), Gaps = 8/211 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYM-AVQVGAGEAKVKN 60 R G++A KLGM ++ G++ VT+L + +C VV + + G + A+ VG A Sbjct: 178 RVGLIALKLGMMPLWTKNGKKHAVTLLQVQDCHVVKYTPSEGAGKLGALTVGGKNASPFY 237 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ + V PK+++ FRV ++ + P G+ ++F GQ VDVT TIGKGF Sbjct: 238 KSEESLEMYREAGVPPKQRIKIFRVTENAKIKP-GTPLYAAHFRPGQYVDVTAKTIGKGF 296 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G MKR F G ATHG + +HR G STG D RV+ KKM G+MG T L+ Sbjct: 297 QGVMKRWGFKGQPATHGQTKTHRRPGAISTG---DIARVWPGKKMPGQMGNRYQTAFGLK 353 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 V ++ K +I V G VPG K+ ++ +RD+ Sbjct: 354 VWRINTKHNIIYVNGSVPG-HKSCFVKIRDT 383 >gi|304373190|ref|YP_003856399.1| 50S ribosomal protein L3 [Mycoplasma hyorhinis HUB-1] gi|304309381|gb|ADM21861.1| 50S ribosomal protein L3 [Mycoplasma hyorhinis HUB-1] gi|330723950|gb|AEC46320.1| 50S ribosomal protein L3 [Mycoplasma hyorhinis MCLD] Length = 231 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 76/212 (35%), Positives = 117/212 (55%), Gaps = 7/212 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ EG IPVTV+ + V T DKNGY A+Q+ A + K +K Sbjct: 3 GILGKKVGMTQLFTEEGISIPVTVVEVQPNVVTNVLTKDKNGYEAIQLAAFDKKKSRFTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F + PK+ + EFR + + +G S F G+ VDV G + GKGF+G Sbjct: 63 PELGHFKKADTEPKRFVKEFRNMQAE----LGQKVDLSIFEEGEFVDVVGTSKGKGFAGT 118 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KR+N +HG + TG D +V K M G +G R TV+NLE++ Sbjct: 119 IKRYNQHIGPKSHGGGGGSKPIRQTGSIGDISGNKVVKGMTMPGHLGHERTTVQNLEIIK 178 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +D ++++KG VPG KK S++++++S K A Sbjct: 179 IDLTNNILVIKGSVPGPKK-SFLVIKESVKQA 209 >gi|320526869|ref|ZP_08028059.1| 50S ribosomal protein L3 [Solobacterium moorei F0204] gi|320132837|gb|EFW25377.1| 50S ribosomal protein L3 [Solobacterium moorei F0204] Length = 253 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 81/211 (38%), Positives = 116/211 (54%), Gaps = 8/211 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT V+ IEG IPVTV+ + V+ +T + +GY AVQ+G + K + +K Sbjct: 3 GILGRKLGMTQVFTIEGTLIPVTVIDVKPNVVLQKKTKEVDGYEAVQLGYEDVKEQRSNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 P G N +PK + E R D++ L VG+ F G +VDV G + GKG+S Sbjct: 63 PAIGHAKKANTAPKHYIKELRA---DEMMNLEVGAEVKADLFKAGDVVDVQGTSKGKGYS 119 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCR-QDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G + R+N THG S HR GS ++ G V K M G+ G T +NL +V Sbjct: 120 GTIVRNNAARGPMTHG-SGHHRHIGSLATNGRNNGVVNKGTVMPGQEGVYTTTNQNLTIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + G ILVKG VPG +K ++++ + K Sbjct: 179 KVDAEEGYILVKGNVPGPRK-GLVVIKTTVK 208 >gi|240047259|ref|YP_002960647.1| 50S ribosomal protein L3 [Mycoplasma conjunctivae HRC/581] gi|239984831|emb|CAT04821.1| 50S ribosomal protein L3 [Mycoplasma conjunctivae] Length = 225 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 115/210 (54%), Gaps = 6/210 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ G IPVTV+ + V T +KN Y A+Q+ + K +K Sbjct: 3 GILGKKVGMTQLFTDHGIAIPVTVIEVQPNIVTNVLTQEKNSYDAIQLSVFDKKASRFNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F N +PKK + EFR + D G V S F G+ VDV G + GKGF+G Sbjct: 63 PELGHFQKANTTPKKFVKEFR---NFDGYKSGDVVDLSIFEAGEFVDVVGTSKGKGFAGT 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KR+N +HG + TG D +V K M G +G RVT++NLE++ Sbjct: 120 IKRYNQAIGPRSHGGGGGSKPIRQTGSIGDISGNKVVKGMTMPGHLGHERVTLQNLEIIK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + +++VKG +PG KK S+++++ + K Sbjct: 180 VDVENSILVVKGSIPGPKK-SFVIIKSASK 208 >gi|259500892|ref|ZP_05743794.1| 50S ribosomal protein L3 [Lactobacillus iners DSM 13335] gi|302190655|ref|ZP_07266909.1| 50S ribosomal protein L3 [Lactobacillus iners AB-1] gi|309803703|ref|ZP_07697793.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 11V1-d] gi|309804974|ref|ZP_07699032.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 09V1-c] gi|309806693|ref|ZP_07700688.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 03V1-b] gi|309808420|ref|ZP_07702319.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 01V1-a] gi|309809118|ref|ZP_07702991.1| 50S ribosomal protein L3 [Lactobacillus iners SPIN 2503V10-D] gi|312871230|ref|ZP_07731328.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 3008A-a] gi|312872706|ref|ZP_07732771.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2062A-h1] gi|312874007|ref|ZP_07734042.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2052A-d] gi|312874981|ref|ZP_07735000.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2053A-b] gi|315654026|ref|ZP_07906942.1| 50S ribosomal protein L3 [Lactobacillus iners ATCC 55195] gi|325912351|ref|ZP_08174747.1| 50S ribosomal protein L3 [Lactobacillus iners UPII 143-D] gi|325913214|ref|ZP_08175583.1| 50S ribosomal protein L3 [Lactobacillus iners UPII 60-B] gi|329920622|ref|ZP_08277309.1| 50S ribosomal protein L3 [Lactobacillus iners SPIN 1401G] gi|259167586|gb|EEW52081.1| 50S ribosomal protein L3 [Lactobacillus iners DSM 13335] gi|308164301|gb|EFO66558.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 11V1-d] gi|308165734|gb|EFO67959.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 09V1-c] gi|308166873|gb|EFO69057.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 03V1-b] gi|308168248|gb|EFO70367.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 01V1-a] gi|308170563|gb|EFO72583.1| 50S ribosomal protein L3 [Lactobacillus iners SPIN 2503V10-D] gi|311089726|gb|EFQ48151.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2053A-b] gi|311090347|gb|EFQ48756.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2052A-d] gi|311091748|gb|EFQ50127.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2062A-h1] gi|311093244|gb|EFQ51590.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 3008A-a] gi|315488722|gb|EFU78368.1| 50S ribosomal protein L3 [Lactobacillus iners ATCC 55195] gi|325475822|gb|EGC78992.1| 50S ribosomal protein L3 [Lactobacillus iners UPII 143-D] gi|325477478|gb|EGC80621.1| 50S ribosomal protein L3 [Lactobacillus iners UPII 60-B] gi|328935880|gb|EGG32340.1| 50S ribosomal protein L3 [Lactobacillus iners SPIN 1401G] Length = 209 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 84/215 (39%), Positives = 122/215 (56%), Gaps = 9/215 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V++ G +PVTV+ V+ +T + +GY AVQVG + + Sbjct: 1 MTKGILGRKVGMTQVFSKNGILVPVTVIEATPNVVLQVKTNESDGYEAVQVGYQDVREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGK 118 +KP +G + +PK+ + E R D +L VGS F+ G +VDVTG + G Sbjct: 61 SNKPAKGHAAKAKTAPKRFIREIR---DVELEGYEVGSEIKVDTFSEGDVVDVTGTSKGH 117 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G G +KR THG S HR GS G + RV K KK+ G MGG +VTV+NL Sbjct: 118 GTQGNIKRWGQSRGPETHG-SRYHRIPGSMGSIIN--RVPKGKKLPGHMGGKQVTVQNLV 174 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + V ++ ++L+KG VPGA KNS I+V+ + K+A Sbjct: 175 IEKVVPEKNVLLIKGNVPGA-KNSLIIVKSAVKAA 208 >gi|162450261|ref|YP_001612628.1| 50S ribosomal protein L3 [Sorangium cellulosum 'So ce 56'] gi|254803690|sp|A9FQE0|RL3_SORC5 RecName: Full=50S ribosomal protein L3 gi|161160843|emb|CAN92148.1| 50S ribosomal protein L3 [Sorangium cellulosum 'So ce 56'] Length = 232 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 72/210 (34%), Positives = 111/210 (52%), Gaps = 4/210 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++N G + TV+ C V+ RTL+K+GY A+ +G GE K+ +K Sbjct: 6 GIIGKKIGMTQIFNETGEVLRCTVVQA-GCVVIGKRTLEKDGYSALILGLGERAEKHTTK 64 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFS-PSYFTVGQLVDVTGMTIGKGFS 121 P+ G + +PK+ + E R + +G+ F VGQ VD G + G+GFS Sbjct: 65 PVAGAYKKSGQTPKRIVRELRCSPEHAAKYEIGTTLKVDEIFEVGQRVDAQGRSRGRGFS 124 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G ++R +F G +HG R GS G PGR KM G G V+ NL++ Sbjct: 125 GVIRRWSFAGAVNSHGTHEYFRHGGSIGTNMTPGRTLPGLKMPGHYGDETVSALNLKIAK 184 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 + + LIL++G VPG KN + +R + K Sbjct: 185 LLPEDNLILIEGPVPGP-KNQVVTIRGAVK 213 >gi|161611308|ref|YP_007411.2| 50S ribosomal protein L3 [Candidatus Protochlamydia amoebophila UWE25] Length = 221 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 77/216 (35%), Positives = 114/216 (52%), Gaps = 10/216 (4%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN---- 60 ++ +K GM +++ +G I TV+ + + +T + +GY A+Q+G + K Sbjct: 5 MMGKKRGMIQLFDEKGNAIVCTVIQAEPNVITQIKTKETDGYTALQLGFEKVTGKTQHTI 64 Query: 61 ---VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 KP G F V ++ L E R+ ++ +G S F + VD T ++ G Sbjct: 65 EARTGKPRLGHFKKAGVESRRFLVESRLDSTEEYT-LGQEISVDTFNGIEFVDATAISKG 123 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KG+ G MKRHNF G A+HG S HR GSTG R PGR K AG+MG RVTV+NL Sbjct: 124 KGYQGVMKRHNFAGGPASHG-SGHHRHAGSTGMRSTPGRGLPGGKKAGQMGNERVTVQNL 182 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +V VD + +I+VKG VPG +N + + + K A Sbjct: 183 RIVKVDSENHVIVVKGQVPGP-RNGLVYITQAKKLA 217 >gi|218282171|ref|ZP_03488470.1| hypothetical protein EUBIFOR_01052 [Eubacterium biforme DSM 3989] gi|218216850|gb|EEC90388.1| hypothetical protein EUBIFOR_01052 [Eubacterium biforme DSM 3989] Length = 235 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 82/216 (37%), Positives = 119/216 (55%), Gaps = 8/216 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RKLGMT V+ +G IPVTV+ + V+ +T++ +GY AVQ+G E K K Sbjct: 5 MMKGLLGRKLGMTQVFTEDGVLIPVTVVEVTPNVVLQKKTVETDGYNAVQLGFEEIKEKR 64 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +K G N SPK+ + E R D D+ + VG + + F G+ VDV G + GKG Sbjct: 65 TTKANIGHCKKANTSPKRFIKEVR---DCDMDVNVGDLVNVDIFAAGETVDVIGTSKGKG 121 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGS---TGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 ++G + R+N THG S + R GS G GR+ K MAG+ GG T +N Sbjct: 122 YNGTIVRNNAHQGPKTHGGSKNIRHIGSLATNGITSRQGRIMKGTIMAGQEGGYTTTNQN 181 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 L V+ VD + +L+KG VPG +K ++VR + S Sbjct: 182 LTVIKVDTENNYMLIKGNVPGPRK-GCVMVRTAKTS 216 >gi|81829049|sp|Q6ME63|RL3_PARUW RecName: Full=50S ribosomal protein L3 gi|46399687|emb|CAF23136.1| probable 50S ribosomal protein L3 [Candidatus Protochlamydia amoebophila UWE25] Length = 235 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 77/216 (35%), Positives = 114/216 (52%), Gaps = 10/216 (4%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN---- 60 ++ +K GM +++ +G I TV+ + + +T + +GY A+Q+G + K Sbjct: 19 MMGKKRGMIQLFDEKGNAIVCTVIQAEPNVITQIKTKETDGYTALQLGFEKVTGKTQHTI 78 Query: 61 ---VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 KP G F V ++ L E R+ ++ +G S F + VD T ++ G Sbjct: 79 EARTGKPRLGHFKKAGVESRRFLVESRLDSTEEYT-LGQEISVDTFNGIEFVDATAISKG 137 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KG+ G MKRHNF G A+HG S HR GSTG R PGR K AG+MG RVTV+NL Sbjct: 138 KGYQGVMKRHNFAGGPASHG-SGHHRHAGSTGMRSTPGRGLPGGKKAGQMGNERVTVQNL 196 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +V VD + +I+VKG VPG +N + + + K A Sbjct: 197 RIVKVDSENHVIVVKGQVPGP-RNGLVYITQAKKLA 231 >gi|13507904|ref|NP_109853.1| 50S ribosomal protein L3 [Mycoplasma pneumoniae M129] gi|2500227|sp|P75580|RL3_MYCPN RecName: Full=50S ribosomal protein L3 gi|1674371|gb|AAB96314.1| ribosomal protein L3 [Mycoplasma pneumoniae M129] Length = 287 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 114/212 (53%), Gaps = 8/212 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+ K+GM+ V+ R+P+TV++ + QV +T K+ Y A + + K ++K Sbjct: 5 GIFGVKVGMSQVFTTNNERLPITVIYCEPNQVAGVKTEAKDKYSATLLSFDTVENKKLNK 64 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSG 122 P +GFF N+ P K L E R ++ G +P + F VG+ VDV+ ++ G+GF+G Sbjct: 65 PQQGFFEKNNLKPTKHLQEIRNMTGFEM---GQQITPQNLFQVGEYVDVSAISKGRGFTG 121 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQ---DPGRVFKNKKMAGRMGGNRVTVKNLEV 179 A+KR NF HG HR GS + RVFK KKM+G G +VTV+NL + Sbjct: 122 AIKRWNFKIGPLGHGAGYPHRFQGSVQAGRGGASAQRVFKGKKMSGHYGHEKVTVQNLRI 181 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V D+ L+LV G + G + +L+R + K Sbjct: 182 VGFDEANMLVLVSGAIAGP-EGGVVLIRTAKK 212 >gi|28377832|ref|NP_784724.1| 50S ribosomal protein L3 [Lactobacillus plantarum WCFS1] gi|300767821|ref|ZP_07077731.1| 50S ribosomal protein L3 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180011|ref|YP_003924139.1| 50S ribosomal protein L3 [Lactobacillus plantarum subsp. plantarum ST-III] gi|42559624|sp|Q88XY6|RL3_LACPL RecName: Full=50S ribosomal protein L3 gi|28270665|emb|CAD63571.1| ribosomal protein L3 [Lactobacillus plantarum WCFS1] gi|300494806|gb|EFK29964.1| 50S ribosomal protein L3 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045502|gb|ADN98045.1| 50S ribosomal protein L3 [Lactobacillus plantarum subsp. plantarum ST-III] Length = 209 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 75/209 (35%), Positives = 118/209 (56%), Gaps = 5/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY A+Q+G + + +K Sbjct: 5 GILGKKVGMTQVFTESGELVPVTVVEVQPNVVLQVKTVENDGYEAIQLGVDDKREVLTNK 64 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G + +PK+ + E R + D VG F G VDVTG+T G G+ G Sbjct: 65 PAQGHAAKAKTTPKRFIREIRNVELGDYT-VGDEVKADIFAAGDAVDVTGITKGHGYQGN 123 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 + + HG S HR GS G + RVFK KK+ GRMG ++ T++NL++V D Sbjct: 124 IHKDGQSRGPMAHG-SRYHRRPGSMGAIIN--RVFKGKKLPGRMGNHQRTMQNLQIVRAD 180 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + ++L+KG VPGA K S++ V+ S KS Sbjct: 181 VENNVLLIKGNVPGANK-SFVTVKTSVKS 208 >gi|167974870|ref|ZP_02557147.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188997728|gb|EDU66825.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 11 str. ATCC 33695] Length = 214 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 74/195 (37%), Positives = 107/195 (54%), Gaps = 10/195 (5%) Query: 21 RRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKL 80 + + TV++++ +V+ +T +K+GY A+Q+G K K ++KP+ G F N PK+ + Sbjct: 1 KAVAATVIYVEPNKVLAVKTNEKDGYNAIQIGYETVKEKALNKPLLGQFKKANSDPKRHI 60 Query: 81 FEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSI 140 EFR D + VG+ + S F GQLV+ T G GF+G++KRHNF HG Sbjct: 61 KEFR----DVVAEVGAELTVSEFEPGQLVNAQAYTKGHGFTGSIKRHNFSMGPMGHGAGY 116 Query: 141 SHRSHGST----GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP 196 HR GS G Q RVFK K+ G G VT KNL V+ V LIL+KG +P Sbjct: 117 PHRYVGSIAKGRGGSQAQ-RVFKGTKLPGHYGHELVTTKNLLVLDVKANENLILIKGAIP 175 Query: 197 GAKKNSWILVRDSFK 211 G K S +L++ + K Sbjct: 176 GP-KGSIVLLKSAKK 189 >gi|254556017|ref|YP_003062434.1| 50S ribosomal protein L3 [Lactobacillus plantarum JDM1] gi|254044944|gb|ACT61737.1| 50S ribosomal protein L3 [Lactobacillus plantarum JDM1] Length = 209 Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 75/209 (35%), Positives = 118/209 (56%), Gaps = 5/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY A+Q+G + + +K Sbjct: 5 GILGQKVGMTQVFTESGELVPVTVVEVQPNVVLQVKTVENDGYEAIQLGVDDKREVLTNK 64 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G + +PK+ + E R + D VG F G VDVTG+T G G+ G Sbjct: 65 PAQGHAAKAKTTPKRFIREIRNVELGDYT-VGDEVKADIFAAGDAVDVTGITKGHGYQGN 123 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 + + HG S HR GS G + RVFK KK+ GRMG ++ T++NL++V D Sbjct: 124 IHKDGQSRGPMAHG-SRYHRRPGSMGAIIN--RVFKGKKLPGRMGNHQRTMQNLQIVRAD 180 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + ++L+KG VPGA K S++ V+ S KS Sbjct: 181 VENNVLLIKGNVPGANK-SFVTVKTSVKS 208 >gi|224045473|ref|XP_002196500.1| PREDICTED: mitochondrial ribosomal protein L3 [Taeniopygia guttata] Length = 501 Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 113/211 (53%), Gaps = 5/211 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R GVVA KLGM ++ G + VT+L + +C V+ + + +++G ++ G V Sbjct: 249 IRVGVVAVKLGMMPIWTKSGEKHAVTLLKVQDCHVLRYVSKEESGAKTAKLLVGGKNVSP 308 Query: 61 VSKPMRG--FFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 SKP F V K+K+ F V DD ++ G+ ++F GQ VDVT TIGK Sbjct: 309 FSKPESAHEIFKEAGVPRKQKVTTFNVT-DDAIIKPGTPLYAAHFRPGQFVDVTAKTIGK 367 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G MKR F G A+HG + +HR G+ + +V++ KKM G+MG T L+ Sbjct: 368 GFQGVMKRWGFKGQPASHGQTKTHRRPGAISTNKA-AKVYRGKKMPGKMGNIYRTSFGLK 426 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 V ++ K +I V G VPG N + VRDS Sbjct: 427 VWRINTKHDIIYVNGSVPG-HTNCLVKVRDS 456 >gi|62857890|ref|NP_001016594.1| mitochondrial ribosomal protein L3 [Xenopus (Silurana) tropicalis] gi|89272068|emb|CAJ81305.1| mitochondrial ribosomal protein L3 [Xenopus (Silurana) tropicalis] gi|134024406|gb|AAI35276.1| mitochondrial ribosomal protein L3 [Xenopus (Silurana) tropicalis] Length = 341 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 74/198 (37%), Positives = 102/198 (51%), Gaps = 4/198 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R GV+A KLGM ++ G R VT+L + +C VV + ++ + G V Sbjct: 91 RVGVIAVKLGMMPIWTKSGDRHAVTMLQVRDCHVVKYTPKEEFDGKTASLTVGGKNVSPF 150 Query: 62 SKPMRG--FFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 KP + V PK+K+ F+V D+ +L G+ ++F GQ VD+T TIGKG Sbjct: 151 YKPESAMELYREAGVPPKQKISIFKVS-DNAILKPGTPLYAAHFRPGQFVDITAKTIGKG 209 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR + G A+HG + +HR G+ DP RVF KM GRMG T L+V Sbjct: 210 FQGVMKRWGYKGQPASHGQTKTHRRPGAISS-GDPARVFPGTKMPGRMGNVYRTSYALKV 268 Query: 180 VSVDDKRGLILVKGCVPG 197 V+ K +I V G VPG Sbjct: 269 WRVNTKHNIIYVNGSVPG 286 >gi|296228096|ref|XP_002759663.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like isoform 2 [Callithrix jacchus] Length = 348 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 9/212 (4%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59 R G+VA KLGM ++ +G+R VT+L + +C V+ + + + +G MA + VG Sbjct: 96 RVGLVAVKLGMMPLWTKDGQRHVVTLLQVRDCHVLKYISKENHDGKMAALSVGGKTVSRF 155 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + S + F+ + + PK+K+ FR+ + L P G+ ++F GQ VDVT TIGKG Sbjct: 156 HKSTQILEFYRELGLPPKQKVKIFRITDNAALKP-GTPLYAAHFRPGQYVDVTAKTIGKG 214 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 F G MKR F G ATHG + +HR G STG D RV+ K+ G+MG TV L Sbjct: 215 FQGVMKRWGFKGQPATHGQTKTHRRPGAISTG---DVARVWPGTKLPGQMGNIDRTVHGL 271 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +V ++ K +I V G VPG KN + VRDS Sbjct: 272 KVWRINTKHNIIYVNGSVPG-HKNCLVKVRDS 302 >gi|206896345|ref|YP_002247334.1| ribosomal protein L3 [Coprothermobacter proteolyticus DSM 5265] gi|206738962|gb|ACI18040.1| ribosomal protein L3 [Coprothermobacter proteolyticus DSM 5265] Length = 219 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 77/208 (37%), Positives = 115/208 (55%), Gaps = 3/208 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GM+ + +G IPVT++ VV+ D G +V +G K K ++K Sbjct: 5 GLLGKKIGMSRFIDEKGVFIPVTLIKA-GPNYVVNVKKDSKGRESVALGFEVVKEKALNK 63 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG-SVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P G V P + + EFR + VG V F G+LVDV G + G+GF+G Sbjct: 64 PQLGVLKKAGVPPVRFVREFRYPGISEKFEVGQEVNVADVFADGELVDVIGTSKGRGFAG 123 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKR F G THG HR G+ G R PG V KKM+G G ++VTV+NL++V V Sbjct: 124 AMKRWGFAGGPKTHGTRGWHRRVGAIGNRTYPGEVKPGKKMSGHYGNSQVTVRNLKIVKV 183 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSF 210 ++ +I VKG VPG+ +N ++ +R ++ Sbjct: 184 IPEQNIIAVKGSVPGS-RNGFVCIRKAY 210 >gi|296228094|ref|XP_002759662.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like isoform 1 [Callithrix jacchus] Length = 376 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 9/212 (4%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59 R G+VA KLGM ++ +G+R VT+L + +C V+ + + + +G MA + VG Sbjct: 124 RVGLVAVKLGMMPLWTKDGQRHVVTLLQVRDCHVLKYISKENHDGKMAALSVGGKTVSRF 183 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + S + F+ + + PK+K+ FR+ + L P G+ ++F GQ VDVT TIGKG Sbjct: 184 HKSTQILEFYRELGLPPKQKVKIFRITDNAALKP-GTPLYAAHFRPGQYVDVTAKTIGKG 242 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 F G MKR F G ATHG + +HR G STG D RV+ K+ G+MG TV L Sbjct: 243 FQGVMKRWGFKGQPATHGQTKTHRRPGAISTG---DVARVWPGTKLPGQMGNIDRTVHGL 299 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +V ++ K +I V G VPG KN + VRDS Sbjct: 300 KVWRINTKHNIIYVNGSVPG-HKNCLVKVRDS 330 >gi|291533621|emb|CBL06734.1| 50S ribosomal protein L3, bacterial [Megamonas hypermegale ART12/1] Length = 149 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 72/149 (48%), Positives = 90/149 (60%), Gaps = 5/149 (3%) Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M+G F+ V P K + E R+ D G S F G LVDVTG + GKGF+G + Sbjct: 1 MKGHFAKAGVEPVKFIRELRLA-DVPEYKAGDSISVDIFGAGDLVDVTGTSKGKGFAGGI 59 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 KRHNF HG S SHR GSTG GRV K KK+ GRMGG +VTV+ L VV V Sbjct: 60 KRHNFARGPMGHG-SKSHREPGSTGAMISGHGGRVLKGKKLPGRMGGAKVTVQRLSVVRV 118 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D R LIL+KG +PGA KNS+++++D+ K Sbjct: 119 DADRNLILIKGAIPGA-KNSFVVIKDTVK 146 >gi|332178455|gb|AEE14144.1| 50S ribosomal protein L3 [Thermodesulfobium narugense DSM 14796] Length = 208 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 77/206 (37%), Positives = 116/206 (56%), Gaps = 7/206 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V +K+GMT G IPVTV+ V RT++K+GY A++V E + Sbjct: 4 MFMGLVGKKIGMTSYITPSGV-IPVTVVQAIKGTVADKRTIEKDGYEAIRVAFQECSERK 62 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP G F ++ P KK+ EF+ + L VG S F+VG ++VTG+T G G Sbjct: 63 INKPELGLFKKASIKPHKKIVEFQ----NSNLNVGDTLDISMFSVGDSINVTGITRGFGT 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR F +HG S + R GSTG ++ K KKM G MG + TVKN+ VV Sbjct: 119 AGTIKRWKFQRGPMSHG-SKNIRKIGSTGVGTGMSKIIKGKKMPGHMGNVKRTVKNISVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 + + L+++KG +PG KNS++++ Sbjct: 178 DLMPEDYLVILKGSIPG-HKNSFVIL 202 >gi|327274961|ref|XP_003222243.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like [Anolis carolinensis] Length = 329 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 80/220 (36%), Positives = 119/220 (54%), Gaps = 7/220 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG--YMAVQVGAGEAKVK 59 R G++A KLGM ++ +G ++ VT+L + +C V+ H +++ Y A+ VGA Sbjct: 78 RVGIIAVKLGMMPLWTKKGEKLAVTLLQVQDCHVIRHIPKEESDGKYPALIVGAKNVSQF 137 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 S + + +V + K+K+ FRV ++ + P G+ ++F GQ VDVT TIGKG Sbjct: 138 QKSVSILEMYRAVGLPVKQKISTFRVTENAIIKP-GTPLYAAHFRPGQYVDVTAKTIGKG 196 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR F G A+HG + +HR G+ +VFK KKM G++G T K L+V Sbjct: 197 FQGVMKRWGFKGQPASHGQTKTHRRPGAIS-NSKVAKVFKGKKMPGQLGNWYRTTKGLKV 255 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV--NCK 217 V K +I V G VPG +N + V DS A +CK Sbjct: 256 WRVSTKFNVIYVHGSVPG-HRNCLVKVSDSSLPAYREDCK 294 >gi|12045004|ref|NP_072814.1| 50S ribosomal protein L3 [Mycoplasma genitalium G37] gi|1350743|sp|P47397|RL3_MYCGE RecName: Full=50S ribosomal protein L3 gi|3844745|gb|AAC71369.1| ribosomal protein L3 [Mycoplasma genitalium G37] gi|166078974|gb|ABY79592.1| ribosomal protein L3 [synthetic Mycoplasma genitalium JCVI-1.0] Length = 257 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 109/200 (54%), Gaps = 7/200 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+ K+GM+ ++ + +P+T+++ + QV +T+ K+ Y A + K ++K Sbjct: 5 GIFGVKVGMSQIFTEQNECLPITIVYCEANQVAGIKTIAKDNYNATLLSFQTVDEKQLNK 64 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSG 122 P +GFFS + + P K L E R + +L G +P F +G+ VDVT +T G+GF+G Sbjct: 65 PKQGFFSKLKLEPHKYLREIRKMQGFEL---GKKITPQELFKIGEYVDVTSLTKGRGFTG 121 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQ---DPGRVFKNKKMAGRMGGNRVTVKNLEV 179 A+KR NF HG HR GS + RVFK KKM+G G +VT++NL + Sbjct: 122 AIKRWNFKIGPLGHGAGYPHRFQGSVQAGRGGSSAQRVFKGKKMSGHYGHEQVTIQNLFI 181 Query: 180 VSVDDKRGLILVKGCVPGAK 199 V D+ L+LV G + G + Sbjct: 182 VGFDEINKLVLVSGAIAGPE 201 >gi|126341656|ref|XP_001379787.1| PREDICTED: similar to Mitochondrial ribosomal protein L3 [Monodelphis domestica] Length = 448 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 75/211 (35%), Positives = 114/211 (54%), Gaps = 5/211 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK--NGYMAVQVGAGEAKV 58 +R G++A KLGM ++ +G++ VT+L + +C V+ + ++ A+ VG Sbjct: 194 VRVGLIAAKLGMMPLWTKDGKKFVVTLLQVQDCHVLKYTPKEECNRNRGALIVGGKNVSP 253 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 S+ + + V V PK+K FRV D+ ++ G+ ++F GQ VDVT TIGK Sbjct: 254 FYKSESLMQMYREVGVPPKQKFSTFRVT-DNAIIKPGTPLYAAHFRPGQYVDVTAKTIGK 312 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G MKR F G A+HG + +HR G+ D RV+ KKM G+MG T L+ Sbjct: 313 GFQGVMKRWGFKGQPASHGQTKTHRRPGAIAT-GDIARVWPGKKMPGKMGNRYRTEFGLK 371 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 V ++ K +I V G VPG +N + +RDS Sbjct: 372 VWRINTKHDIIYVNGSVPG-HRNCLVKIRDS 401 >gi|54020070|ref|YP_115700.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae 232] gi|81823546|sp|Q601L5|RL3_MYCH2 RecName: Full=50S ribosomal protein L3 gi|53987243|gb|AAV27444.1| 50s ribosomal protein L3 [Mycoplasma hyopneumoniae 232] Length = 230 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 76/220 (34%), Positives = 120/220 (54%), Gaps = 7/220 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GM+ ++ EG I V+++ + V T +KN Y A+Q+ A + K K Sbjct: 3 GILGKKVGMSQLFTTEGIAISVSIIEVPENIVTKIITKEKNSYNAIQLAAFDKKQSRFLK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ N PK+ + EFR D +G S F+ G+ VDVTG + GKGF+G Sbjct: 63 PEIGHFAKANTKPKRFIKEFR---DFQGYKLGQTVDVSIFSPGEFVDVTGTSKGKGFAGT 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KR+N +HG + TG D +V K M GR+G +VT ++LE++ Sbjct: 120 IKRYNQAIGPRSHGGGGGSKPIRQTGSLGDISGNKVVKGMTMPGRLGHEKVTKQSLEIIK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 VD + L+++KG VPG KK S+++++ + K N K VS Sbjct: 180 VDKENNLLVLKGSVPGPKK-SFLVIKSAIKKP-NPKNPVS 217 >gi|24213439|ref|NP_710920.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Lai str. 56601] gi|45658703|ref|YP_002789.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|26454655|sp|Q9XD36|RL3_LEPIN RecName: Full=50S ribosomal protein L3 gi|73917494|sp|Q72NG1|RL3_LEPIC RecName: Full=50S ribosomal protein L3 gi|24194209|gb|AAN47938.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Lai str. 56601] gi|45601947|gb|AAS71426.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 206 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 73/198 (36%), Positives = 110/198 (55%), Gaps = 4/198 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GM+ +++ +G IPVTVL + C V ++++ +GY A+Q+ + K Sbjct: 1 MAKGLIGKKVGMSQIFDEQGNIIPVTVLEVGPCAVSQVKSVENDGYEAIQLAFQDIKEIQ 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKG 119 SK + + + PKK L EFR D GSV F V +V VTG++ G+G Sbjct: 61 TSKAEKNHLAKAGLGPKKVLKEFRSFGDSPT--AGSVLKIQDVFAVSDVVKVTGVSKGRG 118 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 + G +KRH G H S HR GS G P RVFK K+ GR G + TV+NL+V Sbjct: 119 YQGVVKRHGHAGGPGAH-GSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQKTTVRNLKV 177 Query: 180 VSVDDKRGLILVKGCVPG 197 V +++++ L+ V G VPG Sbjct: 178 VRINEEKNLLFVSGAVPG 195 >gi|330718972|ref|ZP_08313572.1| 50S ribosomal protein L3 [Leuconostoc fallax KCTC 3537] Length = 226 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 81/217 (37%), Positives = 116/217 (53%), Gaps = 8/217 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G I VT + V+ + + +GY AVQ+G + + Sbjct: 1 MTKGILGRKVGMTQVFTETGELIAVTAVEATPNVVLQLKNAETDGYSAVQLGYQDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G N +PK+ + E R + + VG F G VDVTG+T G GF Sbjct: 61 SNKPEQGHAKKANTTPKRYIREIRDAEGE--FNVGDEIKVDTFQAGDYVDVTGITKGHGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR HG S HR GS G + RVFK K + GRMG N+ T++N+ +V Sbjct: 119 QGAIKRLGQSRGPMAHG-SRYHRRPGSMGAIIN--RVFKGKLLPGRMGNNKRTMQNVAIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 VD + L+L+KG VPGA K S + ++ + K VN K Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTIKSTVK--VNAK 209 >gi|326692237|ref|ZP_08229242.1| 50S ribosomal protein L3 [Leuconostoc argentinum KCTC 3773] Length = 228 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 80/217 (36%), Positives = 119/217 (54%), Gaps = 8/217 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G I VTV+ V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGRKVGMTQVFTETGELIAVTVVEATPNVVLQVKTVETDGYDAVQLGYQDKRAVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G S N +PK+ + E R + + G F G+ VDVTG+T G GF Sbjct: 61 SNKPEQGHASKANTTPKRYVREIRNAEGE--FNAGDEIKVDTFAAGEYVDVTGITKGHGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +K+ HG S HR GS G + RVFK K + GRMG ++ T++N+ +V Sbjct: 119 QGNIKKDGQSRGPMAHG-SRYHRRPGSMGAIIN--RVFKGKLLPGRMGNHKRTMQNVAIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 VD + L+L+KG VPGA K S + ++ + K VN K Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTIKSTVK--VNAK 209 >gi|300812343|ref|ZP_07092778.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496648|gb|EFK31735.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 209 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 80/213 (37%), Positives = 121/213 (56%), Gaps = 5/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G +PVTV+ V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGRKVGMTQIFTKDGVLVPVTVIEATPNVVMQVKTVENDGYEAVQLGYQDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G SPK+ + E R + D VGS + F G +V+VTG + G G+ Sbjct: 61 SNKPEKGHADKAKTSPKRFIRELRGVELSD-YEVGSETTVETFKEGDVVNVTGTSRGHGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH+ THG S HR GS G + RV K KK+ G MG VT++NL V Sbjct: 120 QGNIKRHHQSRGPETHG-SRYHRIPGSMGSIIN--RVPKGKKLPGHMGVKTVTIENLVVE 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V + ++++KG VPGA KNS I+V+ S K++ Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIIVKSSAKAS 208 >gi|104773542|ref|YP_618522.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116513539|ref|YP_812445.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122275691|sp|Q04C15|RL3_LACDB RecName: Full=50S ribosomal protein L3 gi|122984010|sp|Q1GBL8|RL3_LACDA RecName: Full=50S ribosomal protein L3 gi|103422623|emb|CAI97231.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116092854|gb|ABJ58007.1| LSU ribosomal protein L3P [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325125175|gb|ADY84505.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp. bulgaricus 2038] gi|325684720|gb|EGD26874.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 209 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 80/213 (37%), Positives = 121/213 (56%), Gaps = 5/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G +PVTV+ V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGRKVGMTQIFTKDGVLVPVTVIEATPNVVMQVKTVENDGYEAVQLGYQDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G SPK+ + E R + D VGS + F G +V+VTG + G G+ Sbjct: 61 SNKPEKGHADKAKTSPKRFIRELRGVELSD-YEVGSEVTVETFKEGDVVNVTGTSRGHGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH+ THG S HR GS G + RV K KK+ G MG VT++NL V Sbjct: 120 QGNIKRHHQSRGPETHG-SRYHRIPGSMGSIIN--RVPKGKKLPGHMGVKTVTIENLVVE 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V + ++++KG VPGA KNS I+V+ S K++ Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIVVKSSAKAS 208 >gi|73990569|ref|XP_534263.2| PREDICTED: similar to Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3) [Canis familiaris] Length = 456 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 117/212 (55%), Gaps = 9/212 (4%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59 R G++A KLGM ++ +G+R VT+L + +C V+ + + NG MA + VG Sbjct: 204 RVGLIALKLGMMPLWTKDGKRHVVTLLQVQDCHVLKYTPKENHNGKMAALTVGGKTVSRF 263 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + S + F+ + + PK+K+ F V D+ ++ G+ ++F GQ VDVT TIGKG Sbjct: 264 HKSTSVLEFYQELGLPPKQKVKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 322 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 F G MKR F G ATHG + +HR G STG D RV+ KM G+MG T L Sbjct: 323 FQGVMKRWGFKGQPATHGQTKTHRRPGAISTG---DVARVWPGTKMPGQMGNKDRTEYGL 379 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +V ++ K +I V G VPG +N + +RDS Sbjct: 380 KVWRINTKNNIIYVNGSVPG-HRNCLVKIRDS 410 >gi|15829060|ref|NP_326420.1| 50S ribosomal protein L3 [Mycoplasma pulmonis UAB CTIP] gi|42559684|sp|Q98PY0|RL3_MYCPU RecName: Full=50S ribosomal protein L3 gi|14090004|emb|CAC13762.1| 50S RIBOSOMAL PROTEIN L3 [Mycoplasma pulmonis] Length = 266 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 78/210 (37%), Positives = 117/210 (55%), Gaps = 6/210 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT +++ G IPVT++ + V T +KNGY A+Q+ + K K Sbjct: 3 GILGRKVGMTQIFSDNGIVIPVTLIEVKPNIVSNVLTDEKNGYKAIQLSLEDKKKSRQRK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ N +PK+ + E R D +GS S FT G+ VDVTG++ GKGF+G Sbjct: 63 PEIGHFAKANTTPKRFVKEIR---DMQGFELGSNVDVSIFTPGEFVDVTGISKGKGFAGT 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRHN +HG + TG D +V K M G +G +VT++NLEV+ Sbjct: 120 IKRHNQKIGPKSHGGGGGSKPVRQTGSLGDISGNKVVKGMTMPGHLGHEQVTIQNLEVIM 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D K ++LVKG VPG KK ++++++ K Sbjct: 180 TDVKNNILLVKGAVPGPKK-GFVVIKECAK 208 >gi|51244976|ref|YP_064860.1| 50S ribosomal protein L3 [Desulfotalea psychrophila LSv54] gi|81826871|sp|Q6AP71|RL3_DESPS RecName: Full=50S ribosomal protein L3 gi|50876013|emb|CAG35853.1| probable 50S ribosomal protein L3 [Desulfotalea psychrophila LSv54] Length = 209 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 82/197 (41%), Positives = 109/197 (55%), Gaps = 3/197 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ + +GMT VY G+ IPVTV+ C+V+ +T +GY AVQVG K V+K Sbjct: 6 GILGKNIGMTRVYGEVGQAIPVTVVQAGPCKVLQVKTNATDGYNAVQVGFENKKSSRVNK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKGFSG 122 G F+ + + EFRV D VG + S + F G +VDV G + G+GF G Sbjct: 66 AEAGHFAKSDSEGFYFVREFRVV-DPATYNVGDMISVDALFKAGDIVDVQGTSKGRGFQG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR F G H S HR+ GS GC PGRV K KKM GRMG + V KN+ VV V Sbjct: 125 VIKRWGFKGGPGGH-GSKHHRAPGSIGCSAYPGRVVKGKKMPGRMGNDTVLKKNVTVVDV 183 Query: 183 DDKRGLILVKGCVPGAK 199 ++L+KG +PGAK Sbjct: 184 RIDENVVLLKGPMPGAK 200 >gi|291411673|ref|XP_002722112.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like [Oryctolagus cuniculus] Length = 348 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 81/212 (38%), Positives = 116/212 (54%), Gaps = 9/212 (4%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59 R G++A KLGM ++ +G R VT+L + +C V+ + + + NG MA + VG Sbjct: 96 RVGLIALKLGMMPLWTKDGHRHVVTLLQVQDCHVLKYTSKENHNGKMAALTVGGKTVSRF 155 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 S + F+ + + PK+K+ F V D+ ++ G+ ++F GQ VDVT TIGKG Sbjct: 156 RKSTSVLEFYQELGLPPKQKVKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTARTIGKG 214 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 F G MKR F G ATHG + +HR G STG D RV+ KM G+MG T L Sbjct: 215 FQGVMKRWGFKGQPATHGQTKTHRRPGAISTG---DVARVWPGTKMPGQMGNIDRTAYGL 271 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +V ++ K +I V G VPG KN + V+DS Sbjct: 272 KVWRINTKHNIIYVNGSVPG-HKNCLVKVKDS 302 >gi|238855068|ref|ZP_04645396.1| 50S ribosomal protein L3 [Lactobacillus jensenii 269-3] gi|256852036|ref|ZP_05557423.1| 50S ribosomal protein L3 [Lactobacillus jensenii 27-2-CHN] gi|260661395|ref|ZP_05862308.1| 50S ribosomal protein L3 [Lactobacillus jensenii 115-3-CHN] gi|260664853|ref|ZP_05865704.1| 50S ribosomal protein L3 [Lactobacillus jensenii SJ-7A-US] gi|282933636|ref|ZP_06339001.1| 50S ribosomal protein L3 [Lactobacillus jensenii 208-1] gi|282934051|ref|ZP_06339333.1| 50S ribosomal protein L3 [Lactobacillus jensenii 208-1] gi|297205089|ref|ZP_06922485.1| 50S ribosomal protein L3 [Lactobacillus jensenii JV-V16] gi|313472595|ref|ZP_07813084.1| 50S ribosomal protein L3 [Lactobacillus jensenii 1153] gi|238832312|gb|EEQ24621.1| 50S ribosomal protein L3 [Lactobacillus jensenii 269-3] gi|256615448|gb|EEU20638.1| 50S ribosomal protein L3 [Lactobacillus jensenii 27-2-CHN] gi|260547850|gb|EEX23827.1| 50S ribosomal protein L3 [Lactobacillus jensenii 115-3-CHN] gi|260561336|gb|EEX27309.1| 50S ribosomal protein L3 [Lactobacillus jensenii SJ-7A-US] gi|281301883|gb|EFA94145.1| 50S ribosomal protein L3 [Lactobacillus jensenii 208-1] gi|281302241|gb|EFA94478.1| 50S ribosomal protein L3 [Lactobacillus jensenii 208-1] gi|297149667|gb|EFH29964.1| 50S ribosomal protein L3 [Lactobacillus jensenii JV-V16] gi|313448952|gb|EFR61270.1| 50S ribosomal protein L3 [Lactobacillus jensenii 1153] Length = 209 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 82/213 (38%), Positives = 120/213 (56%), Gaps = 7/213 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G +PVTV+ V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGRKVGMTQIFTDKGVLVPVTVIEATPNVVMQVKTVESDGYEAVQLGYQDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFR-VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP +G SPK+ + E R V+ D VGS + F G +VDVTG T G G Sbjct: 61 SNKPEKGHADKAKTSPKRFIREIRGVELKD--YEVGSEVTVDTFKEGDVVDVTGTTRGHG 118 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 + G +KRH THG S HR GS G + RV K KK+ G MG VT++NL + Sbjct: 119 YQGNIKRHGQSRGPETHG-SRYHRIPGSMGSIIN--RVPKGKKLPGHMGVKTVTIQNLVI 175 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V + ++LVKG VPGA K+S I+V+ + K+ Sbjct: 176 EKVVADKNVLLVKGNVPGA-KDSLIVVKSATKA 207 >gi|301633145|gb|ADK86699.1| 50S ribosomal protein L3 [Mycoplasma pneumoniae FH] Length = 287 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 70/200 (35%), Positives = 107/200 (53%), Gaps = 7/200 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+ K+GM+ V+ R+P+TV++ + QV + K+ Y A + + K ++K Sbjct: 5 GIFGVKVGMSQVFTTNNERLPITVIYCEPNQVAGVKNEAKDKYSATLLSFDTVENKKLNK 64 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSG 122 P +GFF N+ P K L E R ++ G +P + F VG+ VDV+ ++ G+GF+G Sbjct: 65 PQQGFFEKNNLKPTKHLQEIRNMTGFEM---GQQITPQNLFQVGEYVDVSAISKGRGFTG 121 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQ---DPGRVFKNKKMAGRMGGNRVTVKNLEV 179 A+KR NF HG HR GS + RVFK KKM+G G +VTV+NL + Sbjct: 122 AIKRWNFKIGPLGHGAGYPHRFQGSVQAGRGGASAQRVFKGKKMSGHYGHEKVTVQNLRI 181 Query: 180 VSVDDKRGLILVKGCVPGAK 199 V D+ L+LV G + G + Sbjct: 182 VGFDEANMLVLVSGAIAGPE 201 >gi|5163204|gb|AAD40583.1|AF115283_2 ribosomal protein L3 [Leptospira interrogans] Length = 206 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 72/198 (36%), Positives = 110/198 (55%), Gaps = 4/198 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GM+ +++ +G IPVTVL + C V ++++ +GY A+Q+ + K Sbjct: 1 MAKGLIGKKVGMSQIFDEQGNIIPVTVLEVGPCAVSQVKSVENDGYEAIQLAFQDIKEIQ 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKG 119 SK + + + PKK L EFR D G+V F V +V VTG++ G+G Sbjct: 61 TSKAEKNHLAKAGLGPKKVLKEFRSFGDSPT--AGAVLKIQDVFAVSDVVKVTGVSKGRG 118 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 + G +KRH G H S HR GS G P RVFK K+ GR G + TV+NL+V Sbjct: 119 YQGVVKRHGHAGGPGAH-GSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQKTTVRNLKV 177 Query: 180 VSVDDKRGLILVKGCVPG 197 V +++++ L+ V G VPG Sbjct: 178 VRINEEKNLLFVSGAVPG 195 >gi|217073974|gb|ACJ85347.1| unknown [Medicago truncatula] Length = 224 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 70/168 (41%), Positives = 88/168 (52%), Gaps = 2/168 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVKNVS 62 GV+ KLGM + G +PVTV+ +V D +GY AVQVG + + ++ Sbjct: 58 GVMGTKLGMMSFFQPNGEVVPVTVVGFKEGNIVTQIKADATDGYNAVQVGYRRVRDRKLT 117 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G P + L EFR+Q D P + F G LVDV+G TIGKGF G Sbjct: 118 KPEMGHLEKAGAIPMRHLQEFRLQSVDGFEPNQRLVFDELFNEGDLVDVSGTTIGKGFQG 177 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 +KRHNF +HG S SHR GS G PGRV+K KKM G+ G N Sbjct: 178 GIKRHNFKRGPMSHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGKDGWN 224 >gi|297581436|ref|ZP_06943359.1| ribosomal protein L3 [Vibrio cholerae RC385] gi|297534274|gb|EFH73112.1| ribosomal protein L3 [Vibrio cholerae RC385] Length = 124 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 63/125 (50%), Positives = 82/125 (65%), Gaps = 1/125 (0%) Query: 88 DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGS 147 + + VGS + F + VDVTG + GKGF GA+KR NF THG S+SHR+ GS Sbjct: 1 NGEEFAVGSELTVELFNEVKKVDVTGTSKGKGFQGAVKRWNFRTQDMTHGNSLSHRAPGS 60 Query: 148 TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVR 207 G Q PGRVFK KKMAG MG RVT +NLE+V VD +R L+L+KG VPGA + ++V+ Sbjct: 61 IGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVDAERNLLLIKGAVPGATGGN-VIVK 119 Query: 208 DSFKS 212 + K+ Sbjct: 120 PAVKA 124 >gi|296111429|ref|YP_003621811.1| ribosomal protein L3 [Leuconostoc kimchii IMSNU 11154] gi|295832961|gb|ADG40842.1| ribosomal protein L3 [Leuconostoc kimchii IMSNU 11154] Length = 227 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 76/212 (35%), Positives = 116/212 (54%), Gaps = 6/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G I VTV+ V+ + + +GY A+Q+G + + Sbjct: 1 MTKGILGRKVGMTQVFTETGELIAVTVVEATPNVVLQVKNAETDGYSALQLGYQDKRAVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G S N +PK+ + E R + + G F G+ VDVTG+T G GF Sbjct: 61 SNKPEQGHASKANTTPKRYIREIRNAEGE--FNAGDEIKVDTFESGEYVDVTGITKGHGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +K+ +HG S HR GS G + RVFK K + GRMG N+ T++N+ +V Sbjct: 119 QGNIKKDGQSRGPMSHG-SRYHRRPGSMGAVIN--RVFKGKLLPGRMGNNKRTMQNVAIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + L+L+KG VPGA K S + ++ + K+ Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTIKSTVKT 206 >gi|223983921|ref|ZP_03634081.1| hypothetical protein HOLDEFILI_01362 [Holdemania filiformis DSM 12042] gi|223964113|gb|EEF68465.1| hypothetical protein HOLDEFILI_01362 [Holdemania filiformis DSM 12042] Length = 230 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 78/221 (35%), Positives = 125/221 (56%), Gaps = 5/221 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT V+ +G IPVTV+ V+ +TL+ +GY AVQ+G + K +K Sbjct: 3 GILGRKLGMTQVFTTDGVLIPVTVVEALPNVVLQKKTLENDGYEAVQLGFEDLSEKGSNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 +G + + + K+ + E R + + L VG+ F G++VDVTG + G+G++G Sbjct: 63 AEKGHAAKASTAAKRFVREIRGTEMTN-LEVGNEVKVDLFAAGEIVDVTGTSKGRGYNGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCR-QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 + R+N THG S + R GS ++ GR+ K AG+ GG T +NLE++ V Sbjct: 122 IVRNNATMGPKTHGGSKNMRHIGSLATTGRNNGRIEKGTAGAGQEGGYTTTTQNLEIIKV 181 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK--SAVNCKGKVS 221 D + +L+KG VPG K+ ++V+ S K +AV+ K +S Sbjct: 182 DVENNYMLIKGNVPGPKR-GLVVVKSSVKGTAAVSAKDLIS 221 >gi|193216762|ref|YP_002000004.1| 50S ribosomal protein L3 [Mycoplasma arthritidis 158L3-1] gi|226730537|sp|B3PMP8|RL3_MYCA5 RecName: Full=50S ribosomal protein L3 gi|193002085|gb|ACF07300.1| ribosomal protein L3 [Mycoplasma arthritidis 158L3-1] Length = 272 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 114/212 (53%), Gaps = 6/212 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT ++ EG IPVT++ + V T++K+GY A Q+ + K + + Sbjct: 3 GILGRKVGMTQLFTNEGILIPVTIVEVKPNVVTKVLTVEKDGYSATQLATEDKKASQIRR 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P F N +PK+ + E R L G S F G++VDVT ++ GKGF+G Sbjct: 63 PEINKFKQANTTPKRFVKEIRNMTGYSL---GDTIDASLFQAGEIVDVTAISKGKGFAGT 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KR N +HG + TG D RV+K M G +G +VT++NLE+V Sbjct: 120 IKRWNQHIGPKSHGGGGGSQPLRQTGSIGDISGNRVWKGMTMPGHLGSEQVTIQNLEIVK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++++KG +PGA K + ++++ + K++ Sbjct: 180 EDPANNMLVIKGSIPGA-KGALVVIKKAIKTS 210 >gi|293402501|ref|ZP_06646636.1| 50S ribosomal protein L3 [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304015|gb|EFE45269.1| 50S ribosomal protein L3 [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 241 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 75/199 (37%), Positives = 109/199 (54%), Gaps = 6/199 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT V+ EG IPVTV+ V+ +T++ +GY AVQ+G + K +K Sbjct: 17 GILGRKLGMTQVFTEEGTLIPVTVVEATPNVVLQKKTVENDGYEAVQLGFEDVKETRSTK 76 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G + N +PK+ E R + D + +G F G+ VDV G + GKG++G Sbjct: 77 PSKGHAAKANTAPKRFAQEIRDCELD--VNLGDEVKVDIFAAGETVDVIGTSKGKGYNGT 134 Query: 124 MKRHNFGGLRATHGVSISHRSHGS---TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 + R+N +HG S HR GS G G++ K MAG+ GG R T +NL +V Sbjct: 135 IVRNNAKIGPKSHG-SGHHRHIGSLATNGITSRQGKILKGTIMAGQEGGYRTTNQNLTIV 193 Query: 181 SVDDKRGLILVKGCVPGAK 199 VD + +L+KG VPG K Sbjct: 194 KVDVENNYLLIKGNVPGPK 212 >gi|148689150|gb|EDL21097.1| mitochondrial ribosomal protein L3, isoform CRA_b [Mus musculus] Length = 292 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 84/224 (37%), Positives = 119/224 (53%), Gaps = 13/224 (5%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRT-LDKNGYMAVQVGAGEAKVK 59 R G++A KLGM ++ +G++ VT+L + +C V+ + D NG +A G+ V Sbjct: 39 FRVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKIAALTVGGKT-VS 97 Query: 60 NVSKP--MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 KP F+ + + PK+ F V D+ ++ G+ ++F GQ VDVT TIG Sbjct: 98 RFYKPDSRLEFYRDLGLPPKQIHKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIG 156 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVK 175 KGF G MKR F G A+HG + +HR G STG D RV+ KM GRMG TV Sbjct: 157 KGFQGVMKRWGFKGQPASHGQTKTHRRPGAISTG---DIARVWPGTKMPGRMGNQNRTVY 213 Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV--NCK 217 L+V V+ K +I V G VPG KN + ++DS A +CK Sbjct: 214 GLKVWRVNTKHNIIYVNGSVPG-HKNCLVKIKDSTLPAYKDSCK 256 >gi|170017943|ref|YP_001728862.1| ribosomal protein L3 [Leuconostoc citreum KM20] gi|226730530|sp|B1MW14|RL3_LEUCK RecName: Full=50S ribosomal protein L3 gi|169804800|gb|ACA83418.1| Ribosomal protein L3 [Leuconostoc citreum KM20] Length = 227 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 79/217 (36%), Positives = 116/217 (53%), Gaps = 8/217 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G I VT + V+ + + +GY A+Q+G + + Sbjct: 1 MTKGILGRKVGMTQVFTESGELIAVTAVEATPNVVLQVKNIATDGYNAIQLGYQDKRTVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G S N +PK+ + E R + + G F G VDVTG+T G GF Sbjct: 61 SNKPEQGHASKANTTPKRYVREVRDAEGE--FNAGDEIKVDTFQAGDYVDVTGITKGHGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+K+ HG S HR GS G + RVFK K + GRMG N+ T++N+ +V Sbjct: 119 QGAIKKLGQSRGPMAHG-SRYHRRPGSMGAIIN--RVFKGKLLPGRMGNNKRTMQNVAIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 VD + L+L+KG VPGA K S + ++ + K VN K Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTIKSTVK--VNAK 209 >gi|90075128|dbj|BAE87244.1| unnamed protein product [Macaca fascicularis] Length = 348 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 79/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R G++A KLGM ++ +G + VT+L + +C V+ + + + + + G V Sbjct: 95 FRVGLIALKLGMMPLWTKDGEKHVVTLLQVQDCHVLKYTSKENHNGKTAALSVGGKTVSR 154 Query: 61 VSK--PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 K P+ F+ + + PK+ + F + + + P G+ ++F GQ VDVT TIGK Sbjct: 155 FRKATPVLEFYRELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGK 213 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 GF G +KR F G ATHG + +HR G STG D GRV+ KM G+MG T Sbjct: 214 GFQGVVKRWGFKGQPATHGQTKTHRRPGALSTG---DIGRVWPGTKMPGKMGNIYRTAYG 270 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 L+V ++ K +I V G VPG KN + VRDS A GK Sbjct: 271 LKVWRINTKHNIIYVNGSVPG-HKNCLVKVRDSKLPAYKDLGK 312 >gi|31981470|ref|NP_444389.2| 39S ribosomal protein L3, mitochondrial [Mus musculus] gi|17865553|sp|Q99N95|RM03_MOUSE RecName: Full=39S ribosomal protein L3, mitochondrial; Short=L3mt; Short=MRP-L3 gi|13559357|dbj|BAB40838.1| mitochondrial ribosomal protein L3 (L3mt) [Mus musculus] gi|22028310|gb|AAH34877.1| Mitochondrial ribosomal protein L3 [Mus musculus] gi|26346775|dbj|BAC37036.1| unnamed protein product [Mus musculus] gi|74141933|dbj|BAE41032.1| unnamed protein product [Mus musculus] gi|74216950|dbj|BAE26589.1| unnamed protein product [Mus musculus] gi|148689151|gb|EDL21098.1| mitochondrial ribosomal protein L3, isoform CRA_c [Mus musculus] Length = 348 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 84/224 (37%), Positives = 119/224 (53%), Gaps = 13/224 (5%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRT-LDKNGYMAVQVGAGEAKVK 59 R G++A KLGM ++ +G++ VT+L + +C V+ + D NG +A G+ V Sbjct: 95 FRVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKIAALTVGGKT-VS 153 Query: 60 NVSKP--MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 KP F+ + + PK+ F V D+ ++ G+ ++F GQ VDVT TIG Sbjct: 154 RFYKPDSRLEFYRDLGLPPKQIHKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIG 212 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVK 175 KGF G MKR F G A+HG + +HR G STG D RV+ KM GRMG TV Sbjct: 213 KGFQGVMKRWGFKGQPASHGQTKTHRRPGAISTG---DIARVWPGTKMPGRMGNQNRTVY 269 Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV--NCK 217 L+V V+ K +I V G VPG KN + ++DS A +CK Sbjct: 270 GLKVWRVNTKHNIIYVNGSVPG-HKNCLVKIKDSTLPAYKDSCK 312 >gi|15029810|gb|AAH11128.1| Mitochondrial ribosomal protein L3 [Mus musculus] Length = 348 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 84/224 (37%), Positives = 119/224 (53%), Gaps = 13/224 (5%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRT-LDKNGYMAVQVGAGEAKVK 59 R G++A KLGM ++ +G++ VT+L + +C V+ + D NG +A G+ V Sbjct: 95 FRVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKIAALTVGGKT-VS 153 Query: 60 NVSKP--MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 KP F+ + + PK+ F V D+ ++ G+ ++F GQ VDVT TIG Sbjct: 154 RFYKPDSRLEFYRDLGLPPKQIHKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIG 212 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVK 175 KGF G MKR F G A+HG + +HR G STG D RV+ KM GRMG TV Sbjct: 213 KGFQGVMKRWGFKGQPASHGQTKTHRRPGAISTG---DIARVWPGTKMPGRMGNQNRTVY 269 Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV--NCK 217 L+V V+ K +I V G VPG KN + ++DS A +CK Sbjct: 270 GLKVWRVNTKHNIIYVNGSVPG-HKNCLVKIKDSTLPAYKDSCK 312 >gi|114589225|ref|XP_516751.2| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes] Length = 348 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 79/221 (35%), Positives = 117/221 (52%), Gaps = 5/221 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKV 58 R G++A KLGM ++ +G++ VT+L + +C V+ + + + NG MA + VG Sbjct: 95 FRVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSR 154 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 + + F+ + + PK+ + F + + + P G+ ++F GQ VDVT TIGK Sbjct: 155 FRKATSILEFYRELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGK 213 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G MKR F G ATHG + +HR G+ D GRV+ KM G+MG T L+ Sbjct: 214 GFQGVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKMGNIYRTEYGLK 272 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 V ++ K +I V G VPG KN + VRDS A GK Sbjct: 273 VWRINTKHNIIYVNGSVPG-HKNCLVKVRDSKLPAYKDLGK 312 >gi|255994807|ref|ZP_05427942.1| 50S ribosomal protein L3 [Eubacterium saphenum ATCC 49989] gi|255993520|gb|EEU03609.1| 50S ribosomal protein L3 [Eubacterium saphenum ATCC 49989] Length = 315 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 80/217 (36%), Positives = 115/217 (52%), Gaps = 3/217 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 + +K GMT ++ +G IPVTV+ +VV +T +GY AV+V E K ++KP Sbjct: 14 IFGKKAGMTQIFTEDGVSIPVTVIEAYPAKVVQIKTQATDGYDAVKVAYIETKEHRINKP 73 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +G +K+ EF + + VG V + S + G VDVTG + GKG +G + Sbjct: 74 KKGELDKAKAGAMRKMAEFTPENGVEYK-VGDVITVSELSEGNKVDVTGTSKGKGTAGNI 132 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH +HG S R G+ PGRVFK K G MG +VTV+NL++V + + Sbjct: 133 KRHGHRRGPMSHG-SKHKRLAGALAGAAYPGRVFKGNKGPGHMGDEQVTVQNLDLVKLIE 191 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 R ++LVKG VPG KK ++V S KS GK + Sbjct: 192 DRNVLLVKGAVPG-KKGGEVMVTYSKKSEYVLSGKAA 227 >gi|309777133|ref|ZP_07672096.1| 50S ribosomal protein L3 [Erysipelotrichaceae bacterium 3_1_53] gi|308915003|gb|EFP60780.1| 50S ribosomal protein L3 [Erysipelotrichaceae bacterium 3_1_53] Length = 228 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 77/209 (36%), Positives = 117/209 (55%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT V+ +G IPVTV+ V+ +T++ +GY AVQ+G + K +K Sbjct: 3 GILGRKLGMTQVFTEDGTLIPVTVVEACPNVVLQKKTVENDGYEAVQLGFEDVKETRSTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 G + N +PK+ + E R + D L +G+ + F+ G+ VDV G + GKGF+G Sbjct: 63 GEAGHAAKANTAPKRFVKEVRDSEFAD-LELGAEINVGIFSAGETVDVIGTSKGKGFNGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGS---TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 + R+N +HG S HR GS G G++ K MAG+ GG R T +NL V+ Sbjct: 122 IVRNNAKIGPKSHG-SGHHRHIGSLATNGITSRQGKIIKGTIMAGQEGGYRTTNQNLTVI 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VD + +L+KG VPG K+ ++VR + Sbjct: 181 KVDVENNYLLIKGNVPGPKR-GMVMVRTA 208 >gi|295099237|emb|CBK88326.1| LSU ribosomal protein L3P [Eubacterium cylindroides T2-87] Length = 231 Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 112/212 (52%), Gaps = 6/212 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT V+ +G IPVTV+ V+ +T +GY AVQ+G E K K +K Sbjct: 3 GLLGRKLGMTQVFTEDGVLIPVTVVEATPNVVLQKKTAQSDGYDAVQLGFEEIKEKRTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 G N SPK+ + E R D + VG + + F G+ VDV G + GKG++G Sbjct: 63 ANIGHCKKANTSPKRFIKEVR--NCDMEVNVGDLIDVTIFAAGETVDVIGTSKGKGYNGT 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGS---TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 + R+N +HG S + R GS G GR+ K MAG+ GG T NL V+ Sbjct: 121 IVRNNAHQGPKSHGGSKNIRHIGSLATNGITSRQGRIMKGTIMAGQEGGYTTTNPNLTVI 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + +L+KG VPG KK ++VR + S Sbjct: 181 KVDKENNYLLIKGNVPGPKK-GLVMVRTAKTS 211 >gi|297671980|ref|XP_002814097.1| PREDICTED: LOW QUALITY PROTEIN: 39S ribosomal protein L3, mitochondrial-like [Pongo abelii] Length = 374 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 80/221 (36%), Positives = 119/221 (53%), Gaps = 6/221 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKV 58 R G++A KLGM ++ +G++ VT+L + +C V+ + + + NG MA + VG Sbjct: 122 FRVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENHNGKMATLSVGGKTVSR 181 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 + + F+ + + PK+ + F + D+ L S+++ ++F GQ VDVT TIGK Sbjct: 182 FRKATSILEFYRELGLPPKQTVKXFNIT-DNAALNRHSLYA-AHFRPGQYVDVTAKTIGK 239 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G MKR F G ATHG + +HR G+ D GRV+ KM G+MG T L+ Sbjct: 240 GFQGVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKMGNIYRTEYGLK 298 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 V ++ K +I V G VPG KN + VRDS A GK Sbjct: 299 VWRINTKHNIIYVNGSVPG-HKNCLVKVRDSSMPAYKDLGK 338 >gi|122692439|ref|NP_001073786.1| 39S ribosomal protein L3, mitochondrial [Bos taurus] gi|88932613|sp|Q3ZBX6|RM03_BOVIN RecName: Full=39S ribosomal protein L3, mitochondrial; Short=L3mt; Short=MRP-L3 gi|73586745|gb|AAI03048.1| Mitochondrial ribosomal protein L3 [Bos taurus] gi|296490939|gb|DAA33052.1| 39S ribosomal protein L3, mitochondrial [Bos taurus] Length = 348 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 79/216 (36%), Positives = 118/216 (54%), Gaps = 9/216 (4%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59 R G+VA KLGM ++ +G++ VT+L + +C V+ + + NG MA + VG Sbjct: 96 RVGLVALKLGMMPLWTKDGKKHVVTLLQVQDCHVLKYTPKENHNGKMAALTVGGKTVSRF 155 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + S + F+ + + PK+K+ F V D+ ++ G+ ++F GQ VDVT TIGKG Sbjct: 156 HKSTSILEFYQELGLPPKQKIKMFNVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 214 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 F G MKR F G ATHG + +HR G STG D RV+ KM G++G T L Sbjct: 215 FQGVMKRWGFKGQPATHGQTKTHRRPGAISTG---DVARVWPGTKMPGQLGNVDRTAFGL 271 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +V ++ K +I V G VPG +N + ++DS A Sbjct: 272 KVWRINTKHNIIYVNGSVPG-HRNCLVKIKDSVLPA 306 >gi|218672012|ref|ZP_03521681.1| 50S ribosomal protein L3 [Rhizobium etli GR56] Length = 74 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 54/74 (72%), Positives = 62/74 (83%), Gaps = 1/74 (1%) Query: 141 SHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKK 200 SHRSHGSTG RQDPG+VFKNKKMAG MG RVT +NLEVVS D+ RGLIL+KG VPG+ K Sbjct: 1 SHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVVSTDEDRGLILIKGAVPGS-K 59 Query: 201 NSWILVRDSFKSAV 214 +WI+VRD+ KSA Sbjct: 60 GAWIIVRDAVKSAA 73 >gi|48645|emb|CAA32542.1| ribosomal protein L3 [Yersinia pseudotuberculosis] Length = 129 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 64/124 (51%), Positives = 80/124 (64%), Gaps = 1/124 (0%) Query: 82 EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSIS 141 EFR+ + + G S F + VDVTG + GKGF+G +KR NF ATHG S+S Sbjct: 1 EFRLPEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLS 59 Query: 142 HRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKN 201 HR GS G Q PG+VFK KKMAG MG RVTV++L+VV VD +R L+LVKG VPGA Sbjct: 60 HRVPGSIGQNQTPGKVFKGKKMAGHMGDERVTVQSLDVVRVDAERNLLLVKGAVPGATGG 119 Query: 202 SWIL 205 + I+ Sbjct: 120 NLIV 123 >gi|313897304|ref|ZP_07830848.1| 50S ribosomal protein L3 [Clostridium sp. HGF2] gi|312958025|gb|EFR39649.1| 50S ribosomal protein L3 [Clostridium sp. HGF2] Length = 228 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 77/209 (36%), Positives = 116/209 (55%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT V+ +G IPVTV+ V+ +T++ +GY AVQ+G + K +K Sbjct: 3 GILGRKLGMTQVFTEDGTLIPVTVVEACPNVVLQKKTVENDGYEAVQLGFEDVKETRSTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 G + N +PK+ + E R + D L +G+ + F+ G+ VDV G + GKGF G Sbjct: 63 GEAGHAAKANTAPKRFVKEVRDSEFAD-LELGAEVNVGIFSAGETVDVIGTSKGKGFMGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGS---TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 + R+N +HG S HR GS G G++ K MAG+ GG R T +NL V+ Sbjct: 122 IVRNNAKIGPKSHG-SGHHRHIGSLATNGITSRQGKILKGTMMAGQEGGYRTTNQNLTVI 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VD + +L+KG VPG K+ ++VR + Sbjct: 181 KVDVENNYLLIKGNVPGPKR-GMVMVRTA 208 >gi|157821097|ref|NP_001100322.1| 39S ribosomal protein L3, mitochondrial [Rattus norvegicus] gi|149018711|gb|EDL77352.1| mitochondrial ribosomal protein L3 (predicted), isoform CRA_a [Rattus norvegicus] Length = 348 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 81/223 (36%), Positives = 120/223 (53%), Gaps = 13/223 (5%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRT-LDKNGYMAVQVGAGEAKVKN 60 R G++A KLGM ++ +G++ VT+L + +C V+ + D NG A G+ + Sbjct: 96 RVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKTAALTVGGKTGSR- 154 Query: 61 VSKP--MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 + KP + F+ + + PK+ + F V D+ ++ G+ ++F GQ VDVT TIGK Sbjct: 155 LYKPNSILEFYRDLGLPPKQTIKIFHV-TDNAVIKPGTPLYAAHFRPGQYVDVTAKTIGK 213 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 GF G MKR F G A+HG + +HR G STG D RV+ KM G+MG TV Sbjct: 214 GFQGVMKRWGFKGQPASHGQTKTHRRPGAISTG---DIARVWPGTKMPGQMGNQNRTVYG 270 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN--CK 217 L+V V+ K +I V G VPG +N + ++DS A CK Sbjct: 271 LKVWRVNTKHNIIYVNGSVPG-HRNCLVKIKDSTLPAYKDLCK 312 >gi|6005862|ref|NP_009139.1| 39S ribosomal protein L3, mitochondrial [Homo sapiens] gi|133116|sp|P09001|RM03_HUMAN RecName: Full=39S ribosomal protein L3, mitochondrial; Short=L3mt; Short=MRP-L3 gi|34754|emb|CAA29639.1| unnamed protein product [Homo sapiens] gi|13097225|gb|AAH03375.1| Mitochondrial ribosomal protein L3 [Homo sapiens] gi|48145557|emb|CAG33001.1| MRPL3 [Homo sapiens] gi|119599615|gb|EAW79209.1| mitochondrial ribosomal protein L3 [Homo sapiens] gi|312152442|gb|ADQ32733.1| mitochondrial ribosomal protein L3 [synthetic construct] Length = 348 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 78/221 (35%), Positives = 117/221 (52%), Gaps = 5/221 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKV 58 R G++A KLGM ++ +G++ VT+L + +C V+ + + + NG MA + VG Sbjct: 95 FRVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSR 154 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 + + F+ + + PK+ + F + + + P G+ ++F GQ VDVT TIGK Sbjct: 155 FRKATSILEFYRELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGK 213 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G MKR F G ATHG + +HR G+ D GRV+ KM G+MG T L+ Sbjct: 214 GFQGVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKMGNIYRTEYGLK 272 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 V ++ K +I V G VPG KN + V+DS A GK Sbjct: 273 VWRINTKHNIIYVNGSVPG-HKNCLVKVKDSKLPAYKDLGK 312 >gi|99032309|pdb|2FTC|C Chain C, Structural Model For The Large Subunit Of The Mammalian Mitochondrial Ribosome Length = 211 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 5/210 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59 R G++A KLGM ++ +G++ VT+L + +C V+ + + + NG MA + VG Sbjct: 1 RVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSRF 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + + F+ + + PK+ + F + + + P G+ ++F GQ VDVT TIGKG Sbjct: 61 RKATSILEFYRELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGKG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR F G ATHG + +HR G+ D GRV+ KM G+MG T L+V Sbjct: 120 FQGVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKMGNIYRTEYGLKV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 ++ K +I V G VPG KN + V+DS Sbjct: 179 WRINTKHNIIYVNGSVPG-HKNCLVKVKDS 207 >gi|300174031|ref|YP_003773197.1| 50S ribosomal protein L3 [Leuconostoc gasicomitatum LMG 18811] gi|299888410|emb|CBL92378.1| 50S ribosomal protein L3 [Leuconostoc gasicomitatum LMG 18811] Length = 227 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 79/217 (36%), Positives = 118/217 (54%), Gaps = 8/217 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G I VTV+ V+ + + +GY A+Q+G + + Sbjct: 1 MTKGILGRKVGMTQVFTEIGELIAVTVVEATPNVVLQVKNAETDGYSALQLGYQDKRTVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G S N +PK+ + E R + + G F G+ VDVTG+T G GF Sbjct: 61 SNKPEQGHASKANTTPKRYVREIRNAEGE--FNAGDEIKVDTFEAGEYVDVTGITKGHGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +K+ +HG S HR GS G + RVFK K + GRMG ++ T++N+ +V Sbjct: 119 QGNIKKDGQSRGPMSHG-SRFHRRPGSMGAVIN--RVFKGKLLPGRMGNHKRTMQNVAIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 VD + L+L+KG VPGA K S + V+ + K VN K Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTVKSTVK--VNAK 209 >gi|148689149|gb|EDL21096.1| mitochondrial ribosomal protein L3, isoform CRA_a [Mus musculus] Length = 304 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 78/204 (38%), Positives = 109/204 (53%), Gaps = 10/204 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRT-LDKNGYMAVQVGAGEAKVK 59 R G++A KLGM ++ +G++ VT+L + +C V+ + D NG +A G+ V Sbjct: 95 FRVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKIAALTVGGKT-VS 153 Query: 60 NVSKP--MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 KP F+ + + PK+ F V D+ ++ G+ ++F GQ VDVT TIG Sbjct: 154 RFYKPDSRLEFYRDLGLPPKQIHKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIG 212 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVK 175 KGF G MKR F G A+HG + +HR G STG D RV+ KM GRMG TV Sbjct: 213 KGFQGVMKRWGFKGQPASHGQTKTHRRPGAISTG---DIARVWPGTKMPGRMGNQNRTVY 269 Query: 176 NLEVVSVDDKRGLILVKGCVPGAK 199 L+V V+ K +I V G VPG K Sbjct: 270 GLKVWRVNTKHNIIYVNGSVPGHK 293 >gi|57530745|ref|NP_001006366.1| 39S ribosomal protein L3, mitochondrial [Gallus gallus] gi|53128932|emb|CAG31347.1| hypothetical protein RCJMB04_5e20 [Gallus gallus] Length = 348 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 112/211 (53%), Gaps = 5/211 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R GVVA KLGM ++ G++ VT+L + +C V+ + + + +G ++ G V Sbjct: 96 VRVGVVAVKLGMMPIWTKSGKKHAVTLLKVQDCHVLKYVSKEDSGGKTAKLLVGGKNVSP 155 Query: 61 VSKPMRGF--FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 SK F V K+K+ F V DD ++ G+ ++F GQ+VDVT TIGK Sbjct: 156 FSKSEAEMEIFREAGVPRKQKVTTFNVT-DDAIIKPGTPLYAAHFRPGQIVDVTAKTIGK 214 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G MKR F G A+HG + +HR G+ + RVF KKM G+MG T L+ Sbjct: 215 GFQGVMKRWGFKGQPASHGQTKTHRRPGAISTNKV-SRVFPGKKMPGKMGNIYRTSFGLK 273 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 V ++ K +I V G VPG N + VRD+ Sbjct: 274 VWRINTKHDIIYVHGSVPG-HTNCLVKVRDT 303 >gi|147906354|ref|NP_001088168.1| mitochondrial ribosomal protein L3 [Xenopus laevis] gi|54035102|gb|AAH84076.1| LOC494992 protein [Xenopus laevis] Length = 341 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 70/198 (35%), Positives = 104/198 (52%), Gaps = 4/198 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK--NGYMAVQVGAGEAKVK 59 R G++A KLGM ++ G + VT+L + +C V+ + ++ ++ VG Sbjct: 91 RVGLIAVKLGMMPIWTKSGEKHAVTMLQVRDCHVIKYTPKEEFDGKTSSLTVGGKNVSPF 150 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 S+ + + V PK+K+ F+V D+ ++ G+ ++F GQ VDVT TIGKG Sbjct: 151 YKSESVMEMYREAGVPPKQKISIFKVS-DNAIIKPGTPLYAAHFRPGQFVDVTAKTIGKG 209 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR + G A+HG + +HR G+ DP RVF KM GRMG T L+V Sbjct: 210 FQGVMKRWGYKGQPASHGQTKTHRRPGAISS-GDPARVFPGTKMPGRMGNIYRTSYALKV 268 Query: 180 VSVDDKRGLILVKGCVPG 197 V+ K +I V G VPG Sbjct: 269 WRVNTKHNIIYVNGSVPG 286 >gi|149018712|gb|EDL77353.1| mitochondrial ribosomal protein L3 (predicted), isoform CRA_b [Rattus norvegicus] Length = 304 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 75/203 (36%), Positives = 111/203 (54%), Gaps = 10/203 (4%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRT-LDKNGYMAVQVGAGEAKVKN 60 R G++A KLGM ++ +G++ VT+L + +C V+ + D NG A G+ + Sbjct: 96 RVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKTAALTVGGKTGSR- 154 Query: 61 VSKP--MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 + KP + F+ + + PK+ + F V D+ ++ G+ ++F GQ VDVT TIGK Sbjct: 155 LYKPNSILEFYRDLGLPPKQTIKIFHV-TDNAVIKPGTPLYAAHFRPGQYVDVTAKTIGK 213 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 GF G MKR F G A+HG + +HR G STG D RV+ KM G+MG TV Sbjct: 214 GFQGVMKRWGFKGQPASHGQTKTHRRPGAISTG---DIARVWPGTKMPGQMGNQNRTVYG 270 Query: 177 LEVVSVDDKRGLILVKGCVPGAK 199 L+V V+ K +I V G VPG + Sbjct: 271 LKVWRVNTKHNIIYVNGSVPGHR 293 >gi|149729728|ref|XP_001497211.1| PREDICTED: similar to Mitochondrial ribosomal protein L3 [Equus caballus] Length = 348 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 78/212 (36%), Positives = 114/212 (53%), Gaps = 9/212 (4%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NG-YMAVQVGAGEAKVK 59 R G++A KLGM ++ +G++ T+L + +C V+ + + NG A+ VG Sbjct: 96 RVGLIALKLGMMPLWTKDGQKHVATLLQVQDCHVLKYTPKENHNGKRAALTVGGKTVSRF 155 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 S + F+ + + PK+K+ F V D+ ++ G+ ++F GQ VDVT TIGKG Sbjct: 156 RKSTSILEFYQELGLPPKQKVKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 214 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 F G MKR F G ATHG + +HR G STG D RV+ KM G+MG T L Sbjct: 215 FQGVMKRWGFKGQPATHGQTKTHRRPGAISTG---DVARVWPGTKMPGQMGNIDRTAYGL 271 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +V ++ K +I V G VPG KN + +RDS Sbjct: 272 KVWRINTKHNIIYVNGSVPG-HKNCLVKIRDS 302 >gi|311268535|ref|XP_001925073.2| PREDICTED: 39S ribosomal protein L3, mitochondrial [Sus scrofa] Length = 399 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 77/212 (36%), Positives = 117/212 (55%), Gaps = 9/212 (4%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59 R G++A KLGM ++ +G++ VT+L + +C V+ + + NG MA + VG Sbjct: 147 RVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTPKENHNGRMAALTVGGKTVSHF 206 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + S + F+ + + PK+K+ F V ++ + P G+ ++F GQ VDVT TIGKG Sbjct: 207 HKSASILEFYQELGLPPKQKVKIFNVTENAVIKP-GTPLYAAHFRPGQYVDVTAKTIGKG 265 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 F G M+R F G ATHG + +HR G STG D RV+ KM G++G T L Sbjct: 266 FQGVMRRWGFKGQPATHGQTKTHRRPGAISTG---DVARVWPGTKMPGQLGNIDRTAFGL 322 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +V ++ K +I V G VPG KN + ++DS Sbjct: 323 KVWRINTKHNIIYVNGSVPG-HKNCLVKIKDS 353 >gi|255644742|gb|ACU22873.1| unknown [Glycine max] Length = 177 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 58/128 (45%), Positives = 85/128 (66%), Gaps = 1/128 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K GM+ +++ G RIP+TVL +D+ V +T +K G+ A+Q+G G K K++ Sbjct: 51 RTGLIAVKCGMSALWDKWGARIPITVLWVDDNIVSQIKTPEKEGFCALQIGCGHKKDKHL 110 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F + V K+KL EF V +D LLPVG+ + +F GQ VD++G+T GKGF Sbjct: 111 TKPEVGHFRAQGVPMKRKLREFPVT-EDALLPVGTSLNVRHFVPGQFVDISGITKGKGFQ 169 Query: 122 GAMKRHNF 129 G MKRH F Sbjct: 170 GVMKRHGF 177 >gi|160914559|ref|ZP_02076774.1| hypothetical protein EUBDOL_00565 [Eubacterium dolichum DSM 3991] gi|158433717|gb|EDP12006.1| hypothetical protein EUBDOL_00565 [Eubacterium dolichum DSM 3991] Length = 234 Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 113/211 (53%), Gaps = 9/211 (4%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT V+ +G IPVTV+ V+ +T++ +GY AVQ+G + K K +K Sbjct: 8 GILGRKLGMTQVFTEDGTLIPVTVVEACPNIVLQKKTVENDGYNAVQIGFEDIKEKRTTK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 G N + K+ E R D D L +G+ F G+ VDV G + GKG++ Sbjct: 68 ANVGHAKKANTTAKRFAREVR---DADFADLDLGAEVKVDIFVAGETVDVIGTSKGKGYN 124 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGS---TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G + R+N THG S + R GS G G++ K MAG+ GG R T +NL Sbjct: 125 GTIVRNNAHQGPKTHGGSKNIRHIGSLATNGITSRQGKILKGTIMAGQEGGYRTTNQNLT 184 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 V+ VD + +L+KG VPG K+ ++VR + Sbjct: 185 VIKVDVENNYLLIKGNVPGPKR-GLVMVRSA 214 >gi|256847763|ref|ZP_05553208.1| 50S ribosomal protein L3 [Lactobacillus coleohominis 101-4-CHN] gi|256715452|gb|EEU30428.1| 50S ribosomal protein L3 [Lactobacillus coleohominis 101-4-CHN] Length = 220 Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 80/214 (37%), Positives = 124/214 (57%), Gaps = 8/214 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGKKVGMTQVFTDNGELVPVTVVDVTPNVVMQIKTVENDGYNAVQLGFDDKREIL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +K +G + N +PK+ + E R + D + VG F G+ VDVTG+T G G+ Sbjct: 61 SNKAEQGHAAKANTAPKRFIGEIRDAELGDDIKVGDEVKADIFAEGETVDVTGITKGHGY 120 Query: 121 SGAMKRHNFGGLRA--THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G + H G R HG S HR GS G + VFK KK+ GRMGGN T+++L+ Sbjct: 121 QGNI--HKDGQSRGPMAHG-SRYHRRPGSLGAIIN--HVFKGKKLPGRMGGNTRTMQHLQ 175 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VV VD + ++L+KG VPGA K S++ +++S K+ Sbjct: 176 VVKVDTENNVLLIKGNVPGANK-SYVTIKNSVKA 208 >gi|118586994|ref|ZP_01544426.1| ribosomal protein L3, BL3 [Oenococcus oeni ATCC BAA-1163] gi|118432616|gb|EAV39350.1| ribosomal protein L3, BL3 [Oenococcus oeni ATCC BAA-1163] Length = 240 Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 76/211 (36%), Positives = 113/211 (53%), Gaps = 6/211 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ +G IPVTV+ V+ +T + +GY A+Q+G + + Sbjct: 1 MTKGILGRKVGMTQVFTDKGELIPVTVIEALPNVVLQVKTPETDGYSALQLGVFDKRKIA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +PK+ + E R + D G F G+ VDV G+T G GF Sbjct: 61 ANKPEQGHAKKASAAPKRYVREIRDAQGD--YKQGDQVKVDVFAAGEYVDVQGITKGHGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G++KR HG S HR GS G + +VFK K + G+MGG+ T + L V Sbjct: 119 QGSIKRLGQSRGPMAHG-SRYHRRPGSMGAIIN--KVFKGKLLPGQMGGDLRTAQKLLVA 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD LIL+KG VPGA K S++ ++ + K Sbjct: 176 GVDPANNLILIKGNVPGANK-SFVTIKSTVK 205 >gi|226226279|ref|YP_002760385.1| 50S ribosomal protein L3 [Gemmatimonas aurantiaca T-27] gi|226089470|dbj|BAH37915.1| 50S ribosomal protein L3 [Gemmatimonas aurantiaca T-27] Length = 227 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 77/224 (34%), Positives = 110/224 (49%), Gaps = 22/224 (9%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT ++N G+++P TV+ V T+D+ G+ +V++G G +V +K Sbjct: 3 GIIGRKLGMTQLFNELGQQVPCTVVEATPNPVTKVSTVDQAGFASVELGFGAQRVARANK 62 Query: 64 -----PMRGFFSSVNV---------SPKKKLFEFRVQKDDDLLPVGSVFSP------SYF 103 P S V +P L FR+ P ++P F Sbjct: 63 KGERTPKGHRASKAEVGHAKKAGLDAPPAVLKSFRLDDAPGKNPEIPTYTPGDKITVDIF 122 Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 T G+ V VTG + G+GF G +KRH F G THG + HR GS G DP RV K KKM Sbjct: 123 TPGERVKVTGTSKGRGFQGVVKRHGFHGGPNTHG-NTKHRKPGSIGAGTDPSRVIKGKKM 181 Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVR 207 G+ G + T N+ + VD +R LI ++G V G N + VR Sbjct: 182 PGQYGNTQHTALNIRIEKVDTERNLIYLRGSVAGP-TNGILFVR 224 >gi|116490658|ref|YP_810202.1| 50S ribosomal protein L3P [Oenococcus oeni PSU-1] gi|290890074|ref|ZP_06553157.1| hypothetical protein AWRIB429_0547 [Oenococcus oeni AWRIB429] gi|122277158|sp|Q04G85|RL3_OENOB RecName: Full=50S ribosomal protein L3 gi|116091383|gb|ABJ56537.1| LSU ribosomal protein L3P [Oenococcus oeni PSU-1] gi|290480265|gb|EFD88906.1| hypothetical protein AWRIB429_0547 [Oenococcus oeni AWRIB429] Length = 247 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 76/211 (36%), Positives = 113/211 (53%), Gaps = 6/211 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ +G IPVTV+ V+ +T + +GY A+Q+G + + Sbjct: 1 MTKGILGRKVGMTQVFTDKGELIPVTVIEALPNVVLQVKTPETDGYSALQLGVFDKRKIA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +PK+ + E R + D G F G+ VDV G+T G GF Sbjct: 61 ANKPEQGHAKKASAAPKRYVREIRDAQGD--YKQGDKVKVDVFAAGEYVDVQGITKGHGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G++KR HG S HR GS G + +VFK K + G+MGG+ T + L V Sbjct: 119 QGSIKRLGQSRGPMAHG-SRYHRRPGSMGSIIN--KVFKGKLLPGQMGGDLRTAQKLLVA 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD LIL+KG VPGA K S++ ++ + K Sbjct: 176 GVDPANNLILIKGNVPGANK-SFVTIKSTVK 205 >gi|194383748|dbj|BAG59232.1| unnamed protein product [Homo sapiens] Length = 375 Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 77/221 (34%), Positives = 116/221 (52%), Gaps = 5/221 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKV 58 R G++A KLGM ++ +G++ VT+L + +C V+ + + + NG MA + VG Sbjct: 122 FRVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSR 181 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 + + F+ + + PK+ + F + + + P G+ ++F GQ VDVT TIGK Sbjct: 182 FRKATSILEFYRELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGK 240 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G MKR F G ATHG + +HR G+ D GRV+ KM G+ G T L+ Sbjct: 241 GFQGVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKTGNIYRTEYGLK 299 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 V ++ K +I V G VPG KN + V+DS A GK Sbjct: 300 VWRINTKHNIIYVNGSVPG-HKNCLVKVKDSKLPAYKDLGK 339 >gi|89898720|ref|YP_515830.1| 50S ribosomal protein L3 [Chlamydophila felis Fe/C-56] gi|109893420|sp|Q252V3|RL3_CHLFF RecName: Full=50S ribosomal protein L3 gi|89332092|dbj|BAE81685.1| 50S ribosomal protein L3 [Chlamydophila felis Fe/C-56] Length = 221 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 75/208 (36%), Positives = 109/208 (52%), Gaps = 10/208 (4%) Query: 1 MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58 MRS ++ +K GM V++ +G + +V+ + V + +GY A+Q+GA E V Sbjct: 1 MRSQLSLMGKKEGMIHVFDKDGNLVACSVISMSPNVVSQIKVDSTDGYNAIQMGADEISV 60 Query: 59 ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111 K V+KP+ G F + L E RV +D + +GS F F VD+ Sbjct: 61 PEKTLQKRVNKPILGHFKKSGSRVFRTLKEVRVSEDAVNEASLGSEFGLEVFEDVSSVDI 120 Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171 +G++ GKGF G MK+ F G THG HR GS G R PGR F K MG Sbjct: 121 SGVSKGKGFQGVMKKFGFRGGPKTHGSGF-HRHAGSIGMRSTPGRCFPGSKRPSHMGAVN 179 Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAK 199 VT+KNLEV+ +D ++ ++LVKG +PG + Sbjct: 180 VTIKNLEVIKIDLEKKVLLVKGAIPGPR 207 >gi|330444113|ref|YP_004377099.1| 50S ribosomal protein L3 [Chlamydophila pecorum E58] gi|328807223|gb|AEB41396.1| ribosomal protein L3 [Chlamydophila pecorum E58] Length = 215 Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 113/212 (53%), Gaps = 8/212 (3%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV------ 58 ++ +K GM V++ +G + +V+ ++ V +TL+K+GY ++Q+G+G+ Sbjct: 3 LMGKKEGMLHVFDKDGSLVACSVISIEPNVVTQIKTLEKDGYTSLQMGSGKESAPLKTLQ 62 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 K +K G + L E RV ++ +G+ F F VDV+G++ G Sbjct: 63 KRYTKAKLGHLKKSRDQVFRVLKEVRVSEEVIGSTSLGAAFGIEVFEGVGAVDVSGVSKG 122 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF G MK++ F G +HG HR GS G R PGR F K MG VT+KNL Sbjct: 123 KGFQGVMKKYGFRGGPGSHGSGF-HRHAGSIGMRSTPGRCFPGSKRPSHMGSENVTIKNL 181 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 EV+ +D +R ++LVKG +PG+K + ++ R S Sbjct: 182 EVIKIDLERKVLLVKGAIPGSKGSVVVVKRSS 213 >gi|3914749|sp|P94799|RL3_ACTAC RecName: Full=50S ribosomal protein L3 gi|1841322|dbj|BAA10947.1| ribosomal protein L3 [Actinobacillus actinomycetemcomitans] Length = 121 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 61/104 (58%), Positives = 74/104 (71%), Gaps = 1/104 (0%) Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168 VDVTG + GKGF G +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G Sbjct: 19 VDVTGTSKGKGFQGGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLG 78 Query: 169 GNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 RVTV++LEVV VD +R L+LVKG VPGA S ++V+ + K+ Sbjct: 79 NERVTVQSLEVVRVDAERKLLLVKGAVPGA-TGSDVIVKPAVKA 121 >gi|313847648|emb|CBY16636.1| putative 50s ribosomal protein [Chlamydophila psittaci RD1] gi|325507077|gb|ADZ18715.1| 50S ribosomal protein L3 [Chlamydophila psittaci 6BC] gi|328914285|gb|AEB55118.1| ribosomal protein L3 [Chlamydophila psittaci 6BC] Length = 221 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 75/208 (36%), Positives = 110/208 (52%), Gaps = 10/208 (4%) Query: 1 MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58 MRS ++ +K GM V++ +G + +V+ + + V + +GY A+Q+GA E V Sbjct: 1 MRSQLSLMGKKEGMIHVFDKDGNLVACSVISMSSNVVTQIKVDSTDGYNAIQMGANEINV 60 Query: 59 ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111 K V+KP G F + L E R+ ++ + + +GS F F VD+ Sbjct: 61 PEKTLQKRVNKPSLGHFKKSGSRVFRSLKEVRLSEEAVNEVSLGSEFGLEVFESVSSVDI 120 Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171 +G++ GKGF G MKR F G +HG HR GS G R PGR F K MG Sbjct: 121 SGVSKGKGFQGVMKRFGFRGGPQSHGSGF-HRHAGSIGMRSTPGRCFPGSKRPSHMGTVN 179 Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAK 199 VTVKNLEV+ VD ++ ++LVKG +PG + Sbjct: 180 VTVKNLEVIKVDLEKKVLLVKGAIPGPR 207 >gi|2500228|sp|P72233|RL3_PLARO RecName: Full=50S ribosomal protein L3 gi|1679861|emb|CAA67347.1| ribosomal protein L3 [Planobispora rosea] Length = 140 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/135 (42%), Positives = 80/135 (59%), Gaps = 1/135 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ +KLGMT V++ + R +PVTV+ C V RT +K+GY AVQ+G G+ + V+K Sbjct: 7 GVLGKKLGMTQVFDADNRMVPVTVVEAGPCVVTRVRTPEKDGYSAVQLGFGQIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ + ++P++ E R D +G F GQ VDVTG + GKGF+G Sbjct: 67 PLGDYLRKHEITPRRYFTEIRTD-DASEYTIGQEVLADTFEAGQFVDVTGKSKGKGFAGV 125 Query: 124 MKRHNFGGLRATHGV 138 MKRH FGGL A+HG Sbjct: 126 MKRHGFGGLGASHGT 140 >gi|33236514|gb|AAP98602.1| ribosomal protein L3 [Chlamydophila pneumoniae TW-183] Length = 235 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 77/221 (34%), Positives = 116/221 (52%), Gaps = 11/221 (4%) Query: 1 MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58 MRS V+ +K GM +++ +G + +V+ ++ V +T + +GY ++Q+GA E Sbjct: 17 MRSHISVMGKKEGMIHIFDKDGSLVACSVIRVEPNVVTQIKTKESDGYFSLQIGAEEMNA 76 Query: 59 ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111 K VSKP G + L E R ++ + + +G F F VDV Sbjct: 77 PAHTITKRVSKPKLGHLRKAGGRVFRFLKEVRGSEEALNGVSLGDAFGLEVFEDVSSVDV 136 Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171 G++ GKGF G MK+ F G +HG HR GS G R PGR F K MG Sbjct: 137 RGISKGKGFQGVMKKFGFRGGPGSHGSGF-HRHAGSIGMRSTPGRCFPGSKRPSHMGAEN 195 Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VTVKNLEV+ VD ++ ++LVKG +PGA + S ++V+ S ++ Sbjct: 196 VTVKNLEVIKVDLEKKVLLVKGAIPGA-RGSIVIVKHSSRT 235 >gi|16752393|ref|NP_444652.1| 50S ribosomal protein L3 [Chlamydophila pneumoniae AR39] gi|161353776|ref|NP_224843.2| 50S ribosomal protein L3 [Chlamydophila pneumoniae CWL029] gi|161353803|ref|NP_300703.2| 50S ribosomal protein L3 [Chlamydophila pneumoniae J138] gi|161484684|ref|NP_876945.2| 50S ribosomal protein L3 [Chlamydophila pneumoniae TW-183] gi|7674301|sp|Q9Z7Q7|RL3_CHLPN RecName: Full=50S ribosomal protein L3 gi|7189035|gb|AAF37984.1| ribosomal protein L3 [Chlamydophila pneumoniae AR39] Length = 219 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 77/221 (34%), Positives = 116/221 (52%), Gaps = 11/221 (4%) Query: 1 MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58 MRS V+ +K GM +++ +G + +V+ ++ V +T + +GY ++Q+GA E Sbjct: 1 MRSHISVMGKKEGMIHIFDKDGSLVACSVIRVEPNVVTQIKTKESDGYFSLQIGAEEMNA 60 Query: 59 ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111 K VSKP G + L E R ++ + + +G F F VDV Sbjct: 61 PAHTITKRVSKPKLGHLRKAGGRVFRFLKEVRGSEEALNGVSLGDAFGLEVFEDVSSVDV 120 Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171 G++ GKGF G MK+ F G +HG HR GS G R PGR F K MG Sbjct: 121 RGISKGKGFQGVMKKFGFRGGPGSHGSGF-HRHAGSIGMRSTPGRCFPGSKRPSHMGAEN 179 Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VTVKNLEV+ VD ++ ++LVKG +PGA + S ++V+ S ++ Sbjct: 180 VTVKNLEVIKVDLEKKVLLVKGAIPGA-RGSIVIVKHSSRT 219 >gi|62184737|ref|YP_219522.1| 50S ribosomal protein L3 [Chlamydophila abortus S26/3] gi|81313080|sp|Q5L720|RL3_CHLAB RecName: Full=50S ribosomal protein L3 gi|62147804|emb|CAH63550.1| putative 50s ribosomal protein [Chlamydophila abortus S26/3] Length = 221 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 108/202 (53%), Gaps = 8/202 (3%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV------ 58 ++ +K GM V++ +G + +V+ + + V + +GY A+Q+GA E V Sbjct: 7 LMGKKEGMIHVFDKDGNLVACSVISMSSNVVTQIKVDSTDGYNAIQMGANEINVPEKTLH 66 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 K V+KP G F ++L E R+ ++ + + +GS F F +DV+G++ G Sbjct: 67 KRVNKPSIGHFKKSGSRVFRELKEVRLSEEAVNEVSLGSEFGLEVFESVSSIDVSGVSKG 126 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF G MKR F G +HG HR GS G R PGR F K MG VTVKNL Sbjct: 127 KGFQGVMKRFGFRGGPQSHGSGF-HRHAGSIGMRSTPGRCFPGSKRPSHMGTVNVTVKNL 185 Query: 178 EVVSVDDKRGLILVKGCVPGAK 199 EV+ +D ++ ++LVKG +PG + Sbjct: 186 EVIKIDLEKKVLLVKGAIPGPR 207 >gi|4376945|gb|AAD18786.1| L3 Ribosomal Protein [Chlamydophila pneumoniae CWL029] gi|8979019|dbj|BAA98854.1| L3 ribosomal protein [Chlamydophila pneumoniae J138] Length = 225 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 77/221 (34%), Positives = 116/221 (52%), Gaps = 11/221 (4%) Query: 1 MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58 MRS V+ +K GM +++ +G + +V+ ++ V +T + +GY ++Q+GA E Sbjct: 7 MRSHISVMGKKEGMIHIFDKDGSLVACSVIRVEPNVVTQIKTKESDGYFSLQIGAEEMNA 66 Query: 59 ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111 K VSKP G + L E R ++ + + +G F F VDV Sbjct: 67 PAHTITKRVSKPKLGHLRKAGGRVFRFLKEVRGSEEALNGVSLGDAFGLEVFEDVSSVDV 126 Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171 G++ GKGF G MK+ F G +HG HR GS G R PGR F K MG Sbjct: 127 RGISKGKGFQGVMKKFGFRGGPGSHGSGF-HRHAGSIGMRSTPGRCFPGSKRPSHMGAEN 185 Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VTVKNLEV+ VD ++ ++LVKG +PGA + S ++V+ S ++ Sbjct: 186 VTVKNLEVIKVDLEKKVLLVKGAIPGA-RGSIVIVKHSSRT 225 >gi|295425652|ref|ZP_06818339.1| 50S ribosomal protein L3 [Lactobacillus amylolyticus DSM 11664] gi|295064668|gb|EFG55589.1| 50S ribosomal protein L3 [Lactobacillus amylolyticus DSM 11664] Length = 212 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 118/211 (55%), Gaps = 5/211 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G +PVTV+ V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGRKVGMTQIFTKDGALVPVTVVEATPNVVMQVKTVESDGYDAVQLGYQDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + SPK+ + E R + + VGS + F G +VDVTG T G G+ Sbjct: 61 SNKPEKGHAAKAKTSPKRFIREIRGVELKN-YEVGSEVTVDTFKEGDVVDVTGTTRGHGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR THG S HR GS G + RV K K + G MG +VT++NL + Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSIIN--RVPKGKHLPGHMGVKKVTIENLVIE 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V + ++++KG VPGA KNS I+V+ + K Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIVVKTASK 206 >gi|116495947|ref|YP_807681.1| ribosomal protein L3 [Lactobacillus casei ATCC 334] gi|191639428|ref|YP_001988594.1| 50S ribosomal protein L3 [Lactobacillus casei BL23] gi|227533960|ref|ZP_03964009.1| ribosomal protein L3 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239630351|ref|ZP_04673382.1| 50S ribosomal protein L3 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301067503|ref|YP_003789526.1| 50S ribosomal protein L3 [Lactobacillus casei str. Zhang] gi|122262653|sp|Q034Y3|RL3_LACC3 RecName: Full=50S ribosomal protein L3 gi|226730526|sp|B3WAL7|RL3_LACCB RecName: Full=50S ribosomal protein L3 gi|116106097|gb|ABJ71239.1| LSU ribosomal protein L3P [Lactobacillus casei ATCC 334] gi|190713730|emb|CAQ67736.1| 50S ribosomal protein L3 [Lactobacillus casei BL23] gi|227188337|gb|EEI68404.1| ribosomal protein L3 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239527963|gb|EEQ66964.1| 50S ribosomal protein L3 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439910|gb|ADK19676.1| Ribosomal protein L3 [Lactobacillus casei str. Zhang] gi|327383517|gb|AEA54993.1| 50S ribosomal protein L3 [Lactobacillus casei LC2W] gi|327386710|gb|AEA58184.1| 50S ribosomal protein L3 [Lactobacillus casei BD-II] Length = 210 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 77/212 (36%), Positives = 121/212 (57%), Gaps = 5/212 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY AVQ+G G+ + Sbjct: 3 RKGILGKKVGMTQVFTDNGELVPVTVVDVTPNVVMQVKTVESDGYEAVQLGYGDMREVLT 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G + +PK+ + E R D +GS F G +VDVTG + G G+ Sbjct: 63 NKPSVGHAKKADTTPKRFVREIRDVALSD-YEIGSEVKADEFAAGDIVDVTGTSKGHGYQ 121 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +K+ HG S HR GS G + +VFK KK+ GRMG + T++NL+VV+ Sbjct: 122 GNIKKDGQSRGPMAHG-SRYHRRPGSLGAIIN--KVFKGKKLPGRMGNHTRTMQNLQVVA 178 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + ++L+KG VPGA K S++ +R + K+A Sbjct: 179 ADTEHNVLLIKGNVPGANK-SFVTIRSAVKAA 209 >gi|116334269|ref|YP_795796.1| 50S ribosomal protein L3 [Lactobacillus brevis ATCC 367] gi|122269049|sp|Q03PV7|RL3_LACBA RecName: Full=50S ribosomal protein L3 gi|116099616|gb|ABJ64765.1| LSU ribosomal protein L3P [Lactobacillus brevis ATCC 367] Length = 216 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 72/208 (34%), Positives = 113/208 (54%), Gaps = 5/208 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V+ G IPVTV+ V+ +T++ +GY A+Q+G + + +K Sbjct: 5 GILGKKVGMTQVFTDAGELIPVTVVEATPNVVLQVKTMENDGYNAIQLGYQDKREVLSNK 64 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G + N +PK+ + EF + D V F G +VDVTG+T G G+ G Sbjct: 65 PEQGHVAKANTTPKRFIREFTDVELGD-YKVADEVKVDTFQAGDIVDVTGVTKGHGYQGN 123 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 + + HG S HR GS G + RVF K+ GRMG +VT++NL +V D Sbjct: 124 IHKDGQSRGPMAHG-SRYHRRPGSLGAIIN--RVFPGMKLPGRMGNKQVTIQNLVIVKAD 180 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 + ++L+KG VPGA K S + V+ + + Sbjct: 181 VENNVLLIKGNVPGANK-SLVTVKSAVR 207 >gi|124806820|ref|XP_001350840.1| mitochondrial ribosomal protein L3 precursor, putative [Plasmodium falciparum 3D7] gi|23496969|gb|AAN36520.1| mitochondrial ribosomal protein L3 precursor, putative [Plasmodium falciparum 3D7] Length = 341 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 72/210 (34%), Positives = 113/210 (53%), Gaps = 4/210 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 RSG++ K+G ++++ G + VTV+ +DNC V+ +T+ KNGY A+++G G V Sbjct: 80 RSGLLGYKVGCMSIWDVWGVKHAVTVVKIDNCYVINQKTISKNGYEALELGVGNMNVIKQ 139 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SK G F + K+ EF+ D LP+ FS +F+ GQ + ++ KGF Sbjct: 140 SKNNIGNFIKRKLGFIHKIKEFKCT-SDCFLPIHHKFSCRHFSPGQNLFISSGIKNKGFC 198 Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179 GAMK+ NF G +HG S +HRS GS + VF+NKKM +G V N ++ Sbjct: 199 GAMKKWNFSGKNKSHGTESKAHRSLGSVSMGKTINIVFRNKKMNTHIGEKSLVKCSNNKL 258 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 ++ + L+ +KG + G KN I + D+ Sbjct: 259 FRINSLKNLLFIKGTI-GGYKNKVIKISDA 287 >gi|161506873|ref|YP_001576827.1| 50S ribosomal protein L3 [Lactobacillus helveticus DPC 4571] gi|260102355|ref|ZP_05752592.1| 50S ribosomal protein L3 [Lactobacillus helveticus DSM 20075] gi|172048367|sp|A8YXK5|RL3_LACH4 RecName: Full=50S ribosomal protein L3 gi|160347862|gb|ABX26536.1| 50S ribosomal protein L3 [Lactobacillus helveticus DPC 4571] gi|260083799|gb|EEW67919.1| 50S ribosomal protein L3 [Lactobacillus helveticus DSM 20075] gi|323465824|gb|ADX69511.1| 50S ribosomal protein L3 [Lactobacillus helveticus H10] gi|328463364|gb|EGF35037.1| 50S ribosomal protein L3 [Lactobacillus helveticus MTCC 5463] Length = 212 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 76/212 (35%), Positives = 119/212 (56%), Gaps = 5/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G +PVTV+ V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGRKVGMTQIFTKDGVLVPVTVVEATPNVVMQVKTVESDGYEAVQLGYQDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G SPK+ + E R + D VGS + F G +V+VTG + G G+ Sbjct: 61 SNKPEKGHADKAKTSPKRFIREIRGVELKD-YEVGSEVTVDTFKEGDVVNVTGTSRGHGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR THG S HR GS G + RV K K++ G MG +VT++NL + Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSIIN--RVPKGKRLPGHMGMKKVTIENLVIE 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V + ++++KG VPGA KNS I+V+ + K+ Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIVVKTASKA 207 >gi|269302431|gb|ACZ32531.1| ribosomal protein L3 [Chlamydophila pneumoniae LPCoLN] Length = 219 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 77/221 (34%), Positives = 116/221 (52%), Gaps = 11/221 (4%) Query: 1 MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58 MRS V+ +K GM +++ +G + +V+ ++ V +T + +GY ++Q+GA E Sbjct: 1 MRSHISVMGKKEGMIHIFDKDGSLVACSVIRVEPNVVAQIKTKESDGYFSLQMGAEEMNA 60 Query: 59 ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111 K VSKP G + L E R ++ + + +G F F VDV Sbjct: 61 PAHTITKRVSKPKLGHLRKAGGRVFRFLKEVRGSEEALNGVSLGDAFGLEVFEDVSSVDV 120 Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171 G++ GKGF G MK+ F G +HG HR GS G R PGR F K MG Sbjct: 121 RGISKGKGFQGVMKKFGFRGGPGSHGSGF-HRHAGSIGMRSTPGRCFPGSKRPSHMGAEN 179 Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VTVKNLEV+ VD ++ ++LVKG +PGA + S ++V+ S ++ Sbjct: 180 VTVKNLEVIKVDLEKKVLLVKGAIPGA-RGSIVIVKHSSRT 219 >gi|91082959|ref|XP_973661.1| PREDICTED: similar to Mitochondrial 39S ribosomal protein L3 [Tribolium castaneum] gi|270007629|gb|EFA04077.1| hypothetical protein TcasGA2_TC014311 [Tribolium castaneum] Length = 355 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 75/221 (33%), Positives = 117/221 (52%), Gaps = 15/221 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49 R+GV+ARK+G+ ++ G++I T+L + + QV+ + T + N + Sbjct: 93 RTGVIARKIGIYPMWLKNGKKISTTLLQVLDNQVIKYYTPESYNPPRPRAGRVSNRKGCL 152 Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109 +GA + ++ G F V PKK L F V D LP G+ S +F VG V Sbjct: 153 LLGAEQGDPSEFTREYCGIFKDSGVIPKKTLARFFVSPDA-ALPPGTSISALHFCVGNYV 211 Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169 DV G+TI +GF G MKRH F G+ A+HGV+ +HR G+ G + GRV+ KM G MG Sbjct: 212 DVRGLTIDRGFQGVMKRHGFKGMPASHGVTKTHRRGGNIGGGGEKGRVWPGTKMPGHMGN 271 Query: 170 NRVTVKNLEVVSVDDKRGLILVKGC-VPGAKKNSWILVRDS 209 ++ L++ ++ K ++ V G +PGA NS + + D+ Sbjct: 272 RYRILRALKIWRINTKYNVLYVSGQNIPGA-TNSIVYIYDT 311 >gi|239790528|dbj|BAH71819.1| ACYPI003905 [Acyrthosiphon pisum] Length = 375 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 108/222 (48%), Gaps = 15/222 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTL--------------DKNGYM 47 R+G++ARKLG ++ G+ + T+L + + V+ + K Sbjct: 109 RTGLIARKLGNYPMWLDNGKSVLSTLLQVIDNHVIKYIPPGEFNPPRKPYSCPNHKKPLG 168 Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107 + VGA A + +K G F + PKK L F V + L P G+ S+F G Sbjct: 169 CLLVGAESADPQYFTKQYCGLFYREGMMPKKYLGRFMVSPEAALQP-GTPLLASHFRPGD 227 Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167 +DV G TI +GF G MKRH F G+ ATHGV+ SHR G+ G + GR+F KM G M Sbjct: 228 FIDVRGKTIDRGFQGVMKRHGFHGMPATHGVTKSHRRGGNVGHGGEKGRIFPGTKMPGHM 287 Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 G K E++ ++ K +I +KG K NS + + D+ Sbjct: 288 GNRYRLHKGAEILRINHKYNVIWIKGIASPGKTNSIVYLYDT 329 >gi|253795616|ref|YP_003038712.1| putative 50S ribosomal subunit protein L3 [Candidatus Hodgkinia cicadicola Dsem] gi|253739924|gb|ACT34259.1| putative 50S ribosomal subunit protein L3 [Candidatus Hodgkinia cicadicola Dsem] Length = 181 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 84/134 (62%), Gaps = 6/134 (4%) Query: 67 GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKR 126 G S V+V ++ F+ V+ ++ GSV S + DV GKGF+G +KR Sbjct: 38 GLTSCVSV---RRAFKAHVKLPNEF---GSVLSADWLARAHATDVNARCKGKGFAGVIKR 91 Query: 127 HNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKR 186 H F GLRA+HGVS++HR+ G+ G RQDPGRV+K KMAGR+GG VT+K ++VV++D Sbjct: 92 HGFSGLRASHGVSLAHRACGAIGSRQDPGRVWKGTKMAGRLGGGFVTLKRVKVVALDSFC 151 Query: 187 GLILVKGCVPGAKK 200 + +KG VPG + Sbjct: 152 QRVTLKGPVPGGSR 165 >gi|227879243|ref|ZP_03997113.1| 50S ribosomal protein L3 [Lactobacillus crispatus JV-V01] gi|227894520|ref|ZP_04012325.1| 50S ribosomal protein L3 [Lactobacillus ultunensis DSM 16047] gi|256844429|ref|ZP_05549915.1| 50S ribosomal protein L3 [Lactobacillus crispatus 125-2-CHN] gi|256849183|ref|ZP_05554616.1| 50S ribosomal protein L3 [Lactobacillus crispatus MV-1A-US] gi|262047199|ref|ZP_06020157.1| 50S ribosomal protein L3 [Lactobacillus crispatus MV-3A-US] gi|293380377|ref|ZP_06626448.1| 50S ribosomal protein L3 [Lactobacillus crispatus 214-1] gi|295692160|ref|YP_003600770.1| 50S ribosomal protein l3 [Lactobacillus crispatus ST1] gi|315037530|ref|YP_004031098.1| 50S ribosomal protein L3 [Lactobacillus amylovorus GRL 1112] gi|325956003|ref|YP_004286613.1| 50S ribosomal protein L3 [Lactobacillus acidophilus 30SC] gi|227861137|gb|EEJ68786.1| 50S ribosomal protein L3 [Lactobacillus crispatus JV-V01] gi|227863679|gb|EEJ71100.1| 50S ribosomal protein L3 [Lactobacillus ultunensis DSM 16047] gi|256613507|gb|EEU18710.1| 50S ribosomal protein L3 [Lactobacillus crispatus 125-2-CHN] gi|256713959|gb|EEU28947.1| 50S ribosomal protein L3 [Lactobacillus crispatus MV-1A-US] gi|260572444|gb|EEX29006.1| 50S ribosomal protein L3 [Lactobacillus crispatus MV-3A-US] gi|290923060|gb|EFD99991.1| 50S ribosomal protein L3 [Lactobacillus crispatus 214-1] gi|295030266|emb|CBL49745.1| 50S ribosomal protein L3 [Lactobacillus crispatus ST1] gi|312275663|gb|ADQ58303.1| 50S ribosomal protein L3 [Lactobacillus amylovorus GRL 1112] gi|325332568|gb|ADZ06476.1| 50S ribosomal protein L3 [Lactobacillus acidophilus 30SC] gi|327182826|gb|AEA31273.1| 50S ribosomal protein L3 [Lactobacillus amylovorus GRL 1118] Length = 212 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 76/212 (35%), Positives = 119/212 (56%), Gaps = 5/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G +PVTV+ V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGRKVGMTQIFTKDGVLVPVTVVEATPNVVMQVKTVESDGYEAVQLGYQDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G SPK+ + E R + D VGS + F G +V+VTG + G G+ Sbjct: 61 SNKPEKGHADKAKTSPKRFIREIRGVELKD-YEVGSEVTVDTFKEGDVVNVTGTSRGHGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR THG S HR GS G + RV K K++ G MG +VT++NL + Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSIIN--RVPKGKRLPGHMGVKKVTIENLVIE 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V + ++++KG VPGA KNS I+V+ + K+ Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIVVKTASKA 207 >gi|168704969|ref|ZP_02737246.1| 50S ribosomal protein L3 [Gemmata obscuriglobus UQM 2246] Length = 302 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 86/280 (30%), Positives = 126/280 (45%), Gaps = 70/280 (25%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVV------VHRTLDKNGYMAVQVGAG 54 M G++ K+GMT V+ EG+ PVTVL L C V+ K+GY A+Q+G Sbjct: 1 MALGLIGYKVGMTQVFTPEGKAEPVTVLQLGPCPVLQIKYPSAEGGAAKDGYTAIQLGFK 60 Query: 55 EAKVKNVSKPMRGFFSS--------------------VNVSPKKKLFEFRV--------- 85 + K K+ ++P +G ++ + P+K + EFR+ Sbjct: 61 DKKRKSATRPEQGHVAAGLKSKRKDARQKAGVVLPPKADCEPQKVIREFRIDLGGAFVQT 120 Query: 86 -------------------------QK-----DDDLLPVGSVFS-PSYFTVGQLVDVTGM 114 QK +D L VG + F Q VDV G Sbjct: 121 GTIKAGPAEASFKVERIKVSGEGATQKHELYTEDVTLKVGDKLTVDQVFKDVQAVDVIGT 180 Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST---GCRQDPGRVFKNKKMAGRMGGNR 171 T G+G++G MKRHNF G+ A HG HR GST + GR K + AG+ G R Sbjct: 181 TKGRGYTGVMKRHNFDGMPAAHGAKKVHRQAGSTASLASNRGTGRPKKGLRRAGQYGNER 240 Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VT++NL VV VD + L+L++G +PG + ++VR + K Sbjct: 241 VTIRNLTVVKVDVENNLMLIRGGIPGF-NGAVVMVRPTNK 279 >gi|58336630|ref|YP_193215.1| 50S ribosomal protein L3 [Lactobacillus acidophilus NCFM] gi|227903187|ref|ZP_04020992.1| 50S ribosomal protein L3 [Lactobacillus acidophilus ATCC 4796] gi|81311536|sp|Q5FM90|RL3_LACAC RecName: Full=50S ribosomal protein L3 gi|58253947|gb|AAV42184.1| 50S ribosomal protein L3 [Lactobacillus acidophilus NCFM] gi|227868992|gb|EEJ76413.1| 50S ribosomal protein L3 [Lactobacillus acidophilus ATCC 4796] Length = 212 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 76/212 (35%), Positives = 119/212 (56%), Gaps = 5/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G +PVTV+ V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGRKVGMTQIFTKDGILVPVTVVEATPNVVMQVKTVESDGYEAVQLGYQDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G SPK+ + E R + D VGS + F G +V+VTG + G G+ Sbjct: 61 SNKPEKGHADKAKTSPKRFIREIRGVELKD-YEVGSEVTVDTFKEGDVVNVTGTSRGHGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR THG S HR GS G + RV K K++ G MG +VT++NL + Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSIIN--RVPKGKRLPGHMGVKKVTIENLVIE 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V + ++++KG VPGA KNS I+V+ + K+ Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIVVKTASKA 207 >gi|308801038|ref|XP_003075300.1| putative 50S ribosomal protein L3 (ISS) [Ostreococcus tauri] gi|116061854|emb|CAL52572.1| putative 50S ribosomal protein L3 (ISS) [Ostreococcus tauri] Length = 338 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 70/160 (43%), Positives = 91/160 (56%), Gaps = 5/160 (3%) Query: 39 RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVF 98 +T +GY AVQVG K + ++KP G + L EFR+ +D VG+ Sbjct: 159 KTEATDGYNAVQVGYDAVKERQLTKPEAGHCKKAGAPALRHLEEFRL-RDAPEYEVGAKI 217 Query: 99 SPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRV 157 + S F G VDV G +IGKGF GA+KR+ F THG S SHR HGS G +PGR+ Sbjct: 218 NVSELFKEGDKVDVRGRSIGKGFQGAVKRYGFSRGLMTHG-SKSHRQHGSIGSGTNPGRI 276 Query: 158 FKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197 + K+M G MG VT+K L V+SV+D I+VKG VPG Sbjct: 277 YPGKRMHGHMGDEMVTIKGLTVMSVEDD--CIIVKGNVPG 314 >gi|70924866|ref|XP_735214.1| 50S ribosomal protein L3 [Plasmodium chabaudi chabaudi] gi|56508675|emb|CAH83308.1| 50S ribosomal protein L3, putative [Plasmodium chabaudi chabaudi] Length = 237 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 73/216 (33%), Positives = 114/216 (52%), Gaps = 4/216 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++ K+G +++I G + VTV+ +DNC V+ + + KNGY A++VG G V Sbjct: 11 RTGLLGYKVGCMSIWDIWGVKHAVTVVKIDNCYVLNQKNITKNGYEALEVGIGNMNVIKQ 70 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SK G + + K+ EF+ D LPV FS +F+ GQ + ++ KGF Sbjct: 71 SKNNIGNYIKRRLGFIHKIREFKCT-SDCFLPVQHKFSARHFSPGQNLFISSSIKNKGFC 129 Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179 GAM++ NF G +HG S +HRS GS + VF+NKKM +G V N ++ Sbjct: 130 GAMQKWNFSGKNQSHGTESKAHRSLGSVSMGKTINIVFRNKKMNTHIGEKSLVKCSNNKL 189 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++ + L+ +KG + G KN I + D+ A N Sbjct: 190 FRINSLKNLLFIKGTI-GGYKNKIIKISDAKGRAFN 224 >gi|255348905|ref|ZP_05380912.1| 50S ribosomal protein L3 [Chlamydia trachomatis 70] gi|255503445|ref|ZP_05381835.1| 50S ribosomal protein L3 [Chlamydia trachomatis 70s] gi|255507124|ref|ZP_05382763.1| 50S ribosomal protein L3 [Chlamydia trachomatis D(s)2923] gi|289525573|emb|CBJ15051.1| LSU ribosomal protein L3P [Chlamydia trachomatis Sweden2] gi|296435133|gb|ADH17311.1| 50S ribosomal protein L3 [Chlamydia trachomatis E/150] gi|296438853|gb|ADH21006.1| 50S ribosomal protein L3 [Chlamydia trachomatis E/11023] Length = 221 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 79/216 (36%), Positives = 110/216 (50%), Gaps = 10/216 (4%) Query: 1 MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58 MRS ++ +K GM V++ G + +V+ +D V +T +GY AVQ+GA + Sbjct: 1 MRSQLSLIGKKEGMMHVFDKNGNLVACSVISVDANVVAQLKTASSDGYNAVQMGADVVQA 60 Query: 59 ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111 K SK + G F + L E V ++ + +G F F VD+ Sbjct: 61 PEKTIEKRFSKALLGHFKKSGGRACRVLKEVVVSEEAVQSVSLGDEFGLEIFDGVSNVDI 120 Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171 G++ GKGF G MK+ F G +HG HR GSTG R PGR F K MG +R Sbjct: 121 CGISKGKGFQGVMKKFGFRGGPKSHGSGF-HRHAGSTGMRSTPGRCFPGSKRPSHMGCDR 179 Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVR 207 VTVKNLEVV VD R ++LVKG +PG K + ++ R Sbjct: 180 VTVKNLEVVKVDLDRKVMLVKGAIPGFKGSVVVVKR 215 >gi|321468355|gb|EFX79340.1| hypothetical protein DAPPUDRAFT_212601 [Daphnia pulex] Length = 374 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 76/225 (33%), Positives = 113/225 (50%), Gaps = 20/225 (8%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE------ 55 RSGV+AR +G +++ +G +I TVLH+ + V+ R + Y+ GA Sbjct: 111 RSGVIARNIGRQQMWDKDGNKIVCTVLHVLDNHVI--RYIPPEEYVKTSRGAIHFKNKTP 168 Query: 56 -------AKVKNVSKPMRGF---FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105 A+ N K R + F+ V + PKK L F + + L P + + +F V Sbjct: 169 LGCLVVGAEATNPEKFTRQYCNLFAEVGLMPKKTLSRFIITPNAALPPCTPI-TAGHFLV 227 Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165 GQ VDV G T+ GF G +KR F G A+HG + HR G+ G +D RV+ KM G Sbjct: 228 GQAVDVYGKTVDHGFQGVVKRWGFKGGPASHGATKFHRRGGTIGTGRDKARVWPGTKMPG 287 Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 MG R + L ++ ++ K +I VKG VPGA NS + + D+ Sbjct: 288 HMGSERRYNRGLMIMRINMKYNVIYVKGTVPGA-TNSIVRIFDTL 331 >gi|68066851|ref|XP_675399.1| 50S ribosomal protein L3 [Plasmodium berghei strain ANKA] gi|56494563|emb|CAH99831.1| 50S ribosomal protein L3, putative [Plasmodium berghei] Length = 335 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 74/216 (34%), Positives = 114/216 (52%), Gaps = 4/216 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++ K+G +++I G + VTV+ +DNC V+ + + KNGY A++VG G V Sbjct: 74 RTGLLGYKVGCMSIWDIWGVKHAVTVVKIDNCYVLNQKNITKNGYEALEVGIGNMNVIKQ 133 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SK G + + K+ EF+ D LPV FS +F+ GQ + ++ KGF Sbjct: 134 SKNNIGNYIKRRLGFIHKIREFKCT-SDCFLPVQHKFSARHFSPGQNLFISSSIKNKGFC 192 Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179 GAMK+ NF G +HG S +HRS GS + VF+NKKM +G V N ++ Sbjct: 193 GAMKKWNFSGKNKSHGTESKAHRSLGSVSMGKTINIVFRNKKMNTHIGEKSLVKCSNNKL 252 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++ + L+ +KG + G KN I + D+ A N Sbjct: 253 FRINSLKNLLFIKGSI-GGYKNKVIKISDAKGRAFN 287 >gi|133117|sp|P18665|RM03_RAT RecName: Full=39S ribosomal protein L3, mitochondrial; Short=L3mt; Short=MRP-L3 Length = 347 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 115/222 (51%), Gaps = 10/222 (4%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRT-LDKNGYMA-VQVGAGEAKVK 59 R G++A KLGM ++ +G++ VT+L + +C V+ + D NG A + VG Sbjct: 96 RVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKTATLTVGGKTGSRL 155 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + + F+ + + PK+ F V D+ ++ G+ ++F GQ VDVT TIGKG Sbjct: 156 YKANSILEFYRDLGLPPKQTTKIFHVT-DNAVIKQGTPLYAAHFRPGQYVDVTAKTIGKG 214 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 F G MKR F G A+HG + +HR G STG D RV+ KM G+MG TV L Sbjct: 215 FQGVMKRWGFKGQPASHGQTKTHRRPGAISTG---DIARVWPGTKMPGKMGNQNRTVYGL 271 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 +V V+ K +I V G V +N + ++DS A GK Sbjct: 272 KVWRVNTKHNIIYVNGSV--GHRNCLVKIKDSTLPAYKDLGK 311 >gi|326922075|ref|XP_003207277.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like [Meleagris gallopavo] Length = 348 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 75/211 (35%), Positives = 112/211 (53%), Gaps = 5/211 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R GVVA KLGM ++ G++ VT+L + +C V+ + + + +G ++ G V Sbjct: 96 VRVGVVAVKLGMMPIWTKSGKKHAVTLLKVQDCHVLKYISKEDSGGKRAKLLVGGKNVSP 155 Query: 61 V--SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 S+ F V K+K+ F V DD ++ G+ ++F GQ+VDVT TIGK Sbjct: 156 FFKSEAEMEIFREAGVPRKQKVTSFDVT-DDAIIKPGTPLYAAHFRPGQIVDVTAKTIGK 214 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G +KR F G A+HG + +HR G+ + RVF KKM G+MG T L+ Sbjct: 215 GFQGVVKRWGFKGQPASHGQTKTHRRPGAISTNKV-SRVFPGKKMPGKMGNIYRTSFALK 273 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 V ++ K +I V G VPG N + VRD+ Sbjct: 274 VWRINTKHDIIYVHGSVPG-HTNCLVKVRDT 303 >gi|157134546|ref|XP_001656360.1| Mitochondrial 39S ribosomal protein L3 [Aedes aegypti] gi|108870456|gb|EAT34681.1| Mitochondrial 39S ribosomal protein L3 [Aedes aegypti] Length = 372 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 69/222 (31%), Positives = 110/222 (49%), Gaps = 15/222 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH--------------RTLDKNGYM 47 R+GV+ARK+G ++ +G +I T+L + + VV + + KN Y Sbjct: 105 RTGVIARKIGQYPLWMKDGTKIRTTLLQVIDNHVVKYIPPAEFNPPLEPRQKKNWKNPYG 164 Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107 + VGA +K G F V PK+ L F V + LLP G+ + ++F VG Sbjct: 165 CLLVGAQSQDPSIFTKEYCGLFKDSGVLPKQHLCRFIVSPEAQLLP-GTPLNVTHFKVGD 223 Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167 VDV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + RV+ KM G M Sbjct: 224 YVDVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRKPGNIGAGGEKARVWPGTKMPGHM 283 Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 G ++ L++ ++ K ++ V+G N + + D+ Sbjct: 284 GNRWRNLRGLKIWRINTKYNVMWVQGSNIAGDTNGLVYIYDT 325 >gi|221061915|ref|XP_002262527.1| 50S ribosomal protein L3 [Plasmodium knowlesi strain H] gi|193811677|emb|CAQ42405.1| 50S ribosomal protein L3, putative [Plasmodium knowlesi strain H] Length = 336 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 74/216 (34%), Positives = 116/216 (53%), Gaps = 4/216 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K+G ++++ G + VTV ++NC V+ + + KNGY A++VG G V Sbjct: 75 RTGLLAYKVGCMSIWDVWGVKHAVTVAKVNNCYVLNQKNITKNGYEALEVGIGNMNVIKQ 134 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SK G + + K+ EF+ D LPV FS +F+ GQ + ++ KGF Sbjct: 135 SKNNIGNYIKRKLGFIHKIKEFKCT-HDCFLPVQHKFSVRHFSPGQNLFISSTVKNKGFC 193 Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGG-NRVTVKNLEV 179 GAMK+ NF G A+HG S +HRS GS + VF++KKM +G N V N ++ Sbjct: 194 GAMKKWNFSGKNASHGTESKAHRSLGSVSMGKTVNIVFRHKKMNTHIGEKNLVKCSNNKL 253 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++ + L+ +KG + G KN I + D+ A N Sbjct: 254 FRINSLQNLLFIKGSI-GGYKNKIIKISDAKGRAFN 288 >gi|82593828|ref|XP_725167.1| ribosomal protein L3 [Plasmodium yoelii yoelii str. 17XNL] gi|23480072|gb|EAA16732.1| ribosomal protein L3, putative [Plasmodium yoelii yoelii] Length = 335 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 74/216 (34%), Positives = 114/216 (52%), Gaps = 4/216 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++ K+G +++I G + VTV+ +DNC V+ + + KNGY A++VG G V Sbjct: 74 RTGLLGYKVGCMSLWDIWGVKHAVTVVKIDNCYVLNQKNITKNGYEALEVGIGNMNVIKQ 133 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SK G + + K+ EF+ D LPV FS +F+ GQ + ++ KGF Sbjct: 134 SKNNIGNYIKRRLGFIHKIREFKCT-SDCFLPVQHKFSARHFSPGQNLFISSSIKNKGFC 192 Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179 GAMK+ NF G +HG S +HRS GS + VF+NKKM +G V N ++ Sbjct: 193 GAMKKWNFSGKNKSHGTESKAHRSLGSVSMGKTINIVFRNKKMNTHIGEKSLVKCSNNKL 252 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++ + L+ +KG + G KN I + D+ A N Sbjct: 253 FRINSLKNLLFIKGSI-GGYKNKVIKISDAKGRAFN 287 >gi|15605257|ref|NP_220043.1| 50S ribosomal protein L3 [Chlamydia trachomatis D/UW-3/CX] gi|76789265|ref|YP_328351.1| 50S ribosomal protein L3 [Chlamydia trachomatis A/HAR-13] gi|237802957|ref|YP_002888151.1| 50S ribosomal protein L3 [Chlamydia trachomatis B/Jali20/OT] gi|237804879|ref|YP_002889033.1| 50S ribosomal protein L3 [Chlamydia trachomatis B/TZ1A828/OT] gi|255311346|ref|ZP_05353916.1| 50S ribosomal protein L3 [Chlamydia trachomatis 6276] gi|255317647|ref|ZP_05358893.1| 50S ribosomal protein L3 [Chlamydia trachomatis 6276s] gi|7674297|sp|O84533|RL3_CHLTR RecName: Full=50S ribosomal protein L3 gi|109893421|sp|Q3KLG9|RL3_CHLTA RecName: Full=50S ribosomal protein L3 gi|3328965|gb|AAC68129.1| L3 Ribosomal Protein [Chlamydia trachomatis D/UW-3/CX] gi|76167795|gb|AAX50803.1| LSU ribosomal protein L3P [Chlamydia trachomatis A/HAR-13] gi|231273179|emb|CAX10092.1| LSU ribosomal protein L3P [Chlamydia trachomatis B/TZ1A828/OT] gi|231274191|emb|CAX10985.1| LSU ribosomal protein L3P [Chlamydia trachomatis B/Jali20/OT] gi|296436061|gb|ADH18235.1| 50S ribosomal protein L3 [Chlamydia trachomatis G/9768] gi|296436989|gb|ADH19159.1| 50S ribosomal protein L3 [Chlamydia trachomatis G/11222] gi|296437922|gb|ADH20083.1| 50S ribosomal protein L3 [Chlamydia trachomatis G/11074] gi|297140422|gb|ADH97180.1| 50S ribosomal protein L3 [Chlamydia trachomatis G/9301] gi|297748658|gb|ADI51204.1| LSU ribosomal protein L3P [Chlamydia trachomatis D-EC] gi|297749538|gb|ADI52216.1| LSU ribosomal protein L3P [Chlamydia trachomatis D-LC] Length = 221 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 79/216 (36%), Positives = 110/216 (50%), Gaps = 10/216 (4%) Query: 1 MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58 MRS ++ +K GM V++ G + +V+ +D V +T +GY AVQ+GA + Sbjct: 1 MRSQLSLIGKKEGMMHVFDKNGNLVACSVISVDANVVAQLKTASSDGYNAVQMGADVVQA 60 Query: 59 ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111 K SK + G F + L E V ++ + +G F F VD+ Sbjct: 61 PEKTIEKRFSKALLGHFKKSGGRVCRVLKEVVVSEEAVQSVSLGDEFGLEIFDGVSNVDI 120 Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171 G++ GKGF G MK+ F G +HG HR GSTG R PGR F K MG +R Sbjct: 121 CGISKGKGFQGVMKKFGFRGGPKSHGSGF-HRHAGSTGMRSTPGRCFPGSKRPSHMGCDR 179 Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVR 207 VTVKNLEVV VD R ++LVKG +PG K + ++ R Sbjct: 180 VTVKNLEVVKVDLDRKVMLVKGAIPGFKGSVVVVKR 215 >gi|21450877|gb|AAK43985.2|AF370170_1 putative ribosomal protein L3 [Arabidopsis thaliana] Length = 134 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 51/93 (54%), Positives = 69/93 (74%), Gaps = 1/93 (1%) Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF G MKRH F G+ A+HG S+SHRS GSTG R PG+VFK +KMAGRMG ++ TVKN+ Sbjct: 1 KGFQGCMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGADQRTVKNV 60 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V +D R L+ V+G VPGA+ N ++ ++D++ Sbjct: 61 WVYKIDPARNLMWVRGQVPGAEGN-FVFIKDAW 92 >gi|15835429|ref|NP_297188.1| 50S ribosomal protein L3 [Chlamydia muridarum Nigg] gi|270285609|ref|ZP_06195003.1| 50S ribosomal protein L3 [Chlamydia muridarum Nigg] gi|270289619|ref|ZP_06195921.1| 50S ribosomal protein L3 [Chlamydia muridarum Weiss] gi|301337005|ref|ZP_07225207.1| 50S ribosomal protein L3 [Chlamydia muridarum MopnTet14] gi|13878709|sp|Q9PJL4|RL3_CHLMU RecName: Full=50S ribosomal protein L3 gi|7190843|gb|AAF39617.1| ribosomal protein L3 [Chlamydia muridarum Nigg] Length = 221 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 79/216 (36%), Positives = 109/216 (50%), Gaps = 10/216 (4%) Query: 1 MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58 MRS ++ +K GM V++ G + +V+ ++ V +T +GY AVQ+GA K Sbjct: 1 MRSQLSLIGKKEGMMHVFDKNGNLVACSVISIEPNVVAQLKTASSDGYNAVQMGADAVKA 60 Query: 59 ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111 K SK + G F + L E V ++ + +G F F VDV Sbjct: 61 PEKTIEKRFSKALLGHFKKSGGCAFRVLKEVVVSEEAVQSVSLGDEFGVEIFDGVSNVDV 120 Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171 G++ GKGF G MK+ F G +HG HR GS G R PGR F K MG +R Sbjct: 121 CGISKGKGFQGVMKKFGFRGGPKSHGSGF-HRHAGSIGMRSTPGRCFPGSKRPSHMGCDR 179 Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVR 207 VTVKNLEVV VD R ++LVKG +PG K + ++ R Sbjct: 180 VTVKNLEVVKVDLDRKVMLVKGAIPGFKGSVVVVKR 215 >gi|166154743|ref|YP_001654861.1| 50S ribosomal protein L3 [Chlamydia trachomatis 434/Bu] gi|166155618|ref|YP_001653873.1| 50S ribosomal protein L3 [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301336017|ref|ZP_07224261.1| 50S ribosomal protein L3 [Chlamydia trachomatis L2tet1] gi|226725148|sp|B0B8A2|RL3_CHLT2 RecName: Full=50S ribosomal protein L3 gi|226725150|sp|B0BCG7|RL3_CHLTB RecName: Full=50S ribosomal protein L3 gi|165930731|emb|CAP04228.1| LSU ribosomal protein L3P [Chlamydia trachomatis 434/Bu] gi|165931606|emb|CAP07182.1| LSU ribosomal protein L3P [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 221 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 78/216 (36%), Positives = 109/216 (50%), Gaps = 10/216 (4%) Query: 1 MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58 MRS ++ +K GM V++ G + +V+ +D V +T +GY AVQ+GA + Sbjct: 1 MRSQLSLIGKKEGMMHVFDKNGNLVACSVISVDANVVAQLKTASSDGYNAVQIGADVVQA 60 Query: 59 ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111 K SK + G F + L E V ++ + +G F F VD+ Sbjct: 61 PEKTIEKRFSKALLGHFKKSGGRACRVLKEVVVSEEAVQSVSLGDEFGLEIFDGVSNVDI 120 Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171 G++ GKGF G MK+ F G +HG HR GS G R PGR F K MG +R Sbjct: 121 CGISKGKGFQGVMKKFGFRGGPKSHGSGF-HRHAGSIGMRSTPGRCFPGSKRPSHMGCDR 179 Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVR 207 VTVKNLEVV VD R ++LVKG +PG K + ++ R Sbjct: 180 VTVKNLEVVKVDLDRKVMLVKGAIPGFKGSVVVVKR 215 >gi|227509931|ref|ZP_03939980.1| 50S ribosomal protein L3 [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227512864|ref|ZP_03942913.1| 50S ribosomal protein L3 [Lactobacillus buchneri ATCC 11577] gi|227522992|ref|ZP_03953041.1| 50S ribosomal protein L3 [Lactobacillus hilgardii ATCC 8290] gi|227083864|gb|EEI19176.1| 50S ribosomal protein L3 [Lactobacillus buchneri ATCC 11577] gi|227089810|gb|EEI25122.1| 50S ribosomal protein L3 [Lactobacillus hilgardii ATCC 8290] gi|227190537|gb|EEI70604.1| 50S ribosomal protein L3 [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 211 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 79/214 (36%), Positives = 116/214 (54%), Gaps = 9/214 (4%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ +K+GMT V+ G +PVTV+ + ++ +T + +GY AVQ+G + + Sbjct: 3 RKGILGKKVGMTQVFTENGELVPVTVVEVTPNVIMQIKTAENDGYDAVQLGYADKRAVLT 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP +G N +PK+ + E KD +L V F G +VDVTG T G G Sbjct: 63 NKPEQGHAKKANTTPKRFIKEI---KDVELGDYKVAEEVKADIFKPGDIVDVTGTTKGHG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 + G + + THG S HR GS G + RV K+ GRMG VT++NLEV Sbjct: 120 YQGNIHKDGQSRGPETHG-SRYHRRPGSLGVIIN--RVVPGMKLPGRMGNKTVTIQNLEV 176 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VS D+ +IL+KG VPGA K S+I +R + + A Sbjct: 177 VSTDNDNNVILIKGNVPGANK-SFITIRTAVRGA 209 >gi|11465422|ref|NP_045187.1| ribosomal protein L3 [Cyanidium caldarium] gi|42559313|sp|Q9TLT2|RK3_CYACA RecName: Full=50S ribosomal protein L3, chloroplastic gi|6466325|gb|AAF12907.1|AF022186_29 unknown [Cyanidium caldarium] Length = 215 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 73/197 (37%), Positives = 101/197 (51%), Gaps = 3/197 (1%) Query: 9 KLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGF 68 KLGMT + + G +PVT++ V+ T N + + G +KP G+ Sbjct: 12 KLGMTQILDNFGNLVPVTIVSQPKPCVITRVTTSLNSQQKLIIQIGCYSDFRANKPTIGY 71 Query: 69 FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128 F +V + L EF+ K+++ VG QLV V+ TIGKGF+G K+H Sbjct: 72 FKKQSVPNLRYLHEFQTYKNNEY-QVGKSLDLKELD-QQLVQVSAYTIGKGFAGYQKKHK 129 Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188 F +HG S SHR GS G PGRVF KMAGR+G +R ++KNL V+ VD L Sbjct: 130 FSRGAMSHG-SKSHRRPGSIGAGTTPGRVFPGVKMAGRLGFSRRSIKNLLVLKVDLTNKL 188 Query: 189 ILVKGCVPGAKKNSWIL 205 L+KG VPG N ++ Sbjct: 189 FLLKGSVPGKYGNLLLV 205 >gi|313123111|ref|YP_004033370.1| 50S ribosomal protein l3 [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279674|gb|ADQ60393.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 198 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/203 (37%), Positives = 114/203 (56%), Gaps = 7/203 (3%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++ +G +PVTV+ V+ +T++ +GY AVQ+G + + +KP +G Sbjct: 1 MTQIFTKDGVLVPVTVIEATPNVVMQVKTVENDGYEAVQLGYQDKREVLSNKPEKGHADK 60 Query: 72 VNVSPKKKLFEFR-VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130 SPK+ + E R V+ D VGS + F G +V+VTG + G G+ G +KRH+ Sbjct: 61 AKTSPKRFIRELRGVELSD--YEVGSEVTVETFKEGDVVNVTGTSRGHGYQGNIKRHHQS 118 Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190 THG S HR GS G + RV K KK+ G MG VT++NL V V + +++ Sbjct: 119 RGPETHG-SRYHRIPGSMGSIIN--RVPKGKKLPGHMGVKTVTIENLVVEKVVADKNVLM 175 Query: 191 VKGCVPGAKKNSWILVRDSFKSA 213 +KG VPGA KNS I+V+ S K++ Sbjct: 176 IKGNVPGA-KNSLIVVKSSAKAS 197 >gi|156553318|ref|XP_001600461.1| PREDICTED: similar to Mitochondrial 39S ribosomal protein L3 [Nasonia vitripennis] Length = 375 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 66/230 (28%), Positives = 110/230 (47%), Gaps = 14/230 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQ----------- 50 R GV+ARK+G+ ++ +G+++ T+ + + V+ + ++ M Q Sbjct: 105 RVGVLARKIGIVPMWMKDGKKVLTTMFQVADNHVIKYIPPEEYKPMITQKKNPLPRNTGC 164 Query: 51 --VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQL 108 VGA + +K G F+ V PK+ L F V + L P +F+ +++ +GQ Sbjct: 165 LLVGADSCDPQLFTKEYCGLFNEAGVMPKRLLARFHVSPEGALQPGTPLFA-THYKIGQY 223 Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168 +D+ G TI +GF G MKR F G+ A+HGV+ +HR G+ G RV K+ G MG Sbjct: 224 IDIRGKTIDRGFQGVMKRWGFHGMPASHGVTKTHRRPGNIGSGGKKARVMPGTKLPGHMG 283 Query: 169 GNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 VK +V ++ + +I V G + NS + D+ CK Sbjct: 284 NRYRIVKAQRIVRINTRYNVIWVLGQASAGETNSLVQFYDTIVPLKTCKA 333 >gi|329942411|ref|ZP_08291221.1| ribosomal L3 family protein [Chlamydophila psittaci Cal10] gi|328815321|gb|EGF85309.1| ribosomal L3 family protein [Chlamydophila psittaci Cal10] Length = 208 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 70/195 (35%), Positives = 102/195 (52%), Gaps = 8/195 (4%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV------KNVSKPM 65 M V++ +G + +V+ + + V + +GY A+Q+GA E V K V+KP Sbjct: 1 MIHVFDKDGNLVACSVISMSSNVVTQIKVDSTDGYNAIQMGANEINVPEKTLQKRVNKPS 60 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G F + L E R+ ++ + + +GS F F VD++G++ GKGF G M Sbjct: 61 LGHFKKSGSRVFRSLKEVRLSEEAVNEVSLGSEFGLEVFESVSSVDISGVSKGKGFQGVM 120 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR F G +HG HR GS G R PGR F K MG VTVKNLEV+ VD Sbjct: 121 KRFGFRGGPQSHGSGF-HRHAGSIGMRSTPGRCFPGSKRPSHMGTVNVTVKNLEVIKVDL 179 Query: 185 KRGLILVKGCVPGAK 199 ++ ++LVKG +PG + Sbjct: 180 EKKVLLVKGAIPGPR 194 >gi|156095889|ref|XP_001613979.1| 50S ribosomal protein L3 [Plasmodium vivax SaI-1] gi|148802853|gb|EDL44252.1| 50S ribosomal protein L3, putative [Plasmodium vivax] Length = 336 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 115/216 (53%), Gaps = 4/216 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K+G ++++ G + VTV +++C V+ + + KNGY A+++G G V Sbjct: 75 RTGLLAYKVGCMSIWDVWGVKHAVTVAKINHCYVLNQKNITKNGYEALEIGIGNMNVVKQ 134 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SK G + + K+ EF+ D LPV FS +F+ GQ + ++ KGF Sbjct: 135 SKNNIGNYIKRKLGFIHKIKEFKCT-SDCFLPVQHKFSARHFSPGQNLFISSTIKSKGFC 193 Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179 GAMK+ NF G A+HG S +HRS GS + VF+NKKM +G V N ++ Sbjct: 194 GAMKKWNFSGKNASHGTESKAHRSLGSVSMGKTVNIVFRNKKMNTHIGEKTLVKCSNNKL 253 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++ + L+ +KG + G KN I + D+ A N Sbjct: 254 FRINSLQNLLFIKGPI-GGYKNKIIKISDAKGRAFN 288 >gi|312375540|gb|EFR22896.1| hypothetical protein AND_14042 [Anopheles darlingi] Length = 1032 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 15/222 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH--------------RTLDKNGYM 47 R+GV+A+K+G ++ G +I T+L + +VV + R + Y Sbjct: 759 RTGVIAKKIGQYPLWTRNGTKIRTTLLQIVENEVVKYIPPEEYRPAQEPRQRRNWRRPYG 818 Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107 + VGA +K G F V PK+ L F V + L P G+ + +F VG Sbjct: 819 CLLVGAENGDPSLFTKEYAGLFQHTGVLPKQHLCRFLVSPEAQL-PPGTALTVDHFRVGD 877 Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167 VDV G T+ +GF G +KRH F G+ THGV+ +HR G+ G RV+ KM G M Sbjct: 878 YVDVRGKTVDRGFQGVVKRHGFKGMPKTHGVTKTHRRPGNIGAGGQKARVWPGTKMPGHM 937 Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 G ++ L+V+ ++ + ++ V+ N + V D+ Sbjct: 938 GNRWRVLRGLQVLRINRQYNVMWVRSSNIAGSTNGLVYVYDT 979 >gi|293372118|ref|ZP_06618509.1| 50S ribosomal protein L3 [Bacteroides ovatus SD CMC 3f] gi|292632910|gb|EFF51497.1| 50S ribosomal protein L3 [Bacteroides ovatus SD CMC 3f] Length = 142 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 61/144 (42%), Positives = 84/144 (58%), Gaps = 4/144 (2%) Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M G F V+PK+ L EF+ + + L +G + F VDV G + GKGF G + Sbjct: 1 MMGHFKRAGVTPKRHLAEFKEFETE--LNLGDTITVEMFNDASFVDVVGTSKGKGFQGVV 58 Query: 125 KRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 KRH FGG+ +ATHG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 59 KRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKVI 118 Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207 L+LVKG +PG K S +L+ Sbjct: 119 ADHNLLLVKGSIPGC-KGSIVLIE 141 >gi|158296418|ref|XP_316827.4| AGAP000857-PA [Anopheles gambiae str. PEST] gi|157015287|gb|EAA12062.4| AGAP000857-PA [Anopheles gambiae str. PEST] Length = 373 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 15/223 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD--------------KNGYM 47 R+GV+A+K+G ++ +G++I T+L + + +VV + + + Y Sbjct: 100 RTGVIAKKIGQYPLWTKDGQKIRTTLLQIVDNEVVKYIPPEEYRPAQEPRQSRNWRKPYG 159 Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107 + VGA +K G F V PKK L F V + L P G+ + S+F VG Sbjct: 160 CLLVGAEHGDPSLFTKEYAGLFHESGVLPKKHLCRFIVSPEAQL-PSGTALTVSHFRVGD 218 Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167 VDV G+T+ +GF G +KRH F G+ +HGV+ +HR G+ G + RV+ ++ G M Sbjct: 219 FVDVRGLTVDRGFQGVVKRHGFKGMPKSHGVTKTHRRPGNIGAGGNKARVWPGTRLPGHM 278 Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 G ++ L ++ ++ + ++ V G N + + D+ Sbjct: 279 GNRWRVLRGLRILRINPQYNVMWVMGSNIAGNTNGIVYIYDTI 321 >gi|29839861|ref|NP_828967.1| 50S ribosomal protein L3 [Chlamydophila caviae GPIC] gi|42559611|sp|Q824Q1|RL3_CHLCV RecName: Full=50S ribosomal protein L3 gi|29834208|gb|AAP04845.1| ribosomal protein L3 [Chlamydophila caviae GPIC] Length = 221 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 75/218 (34%), Positives = 112/218 (51%), Gaps = 10/218 (4%) Query: 1 MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58 MRS ++ +K GM V++ +G + +V+ + + V + +GY A+Q+GA E V Sbjct: 1 MRSQLSLMGKKEGMIHVFDKDGNLVACSVISVGSNVVTQIKVDSTDGYNAIQMGANEINV 60 Query: 59 ------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111 K ++KP G L E R+ +D + + +G+ F VD+ Sbjct: 61 PEKTLEKRMNKPELGHLKKSGSRVFGLLKEVRLSEDAINEVSLGNEFGLEVLEDISSVDI 120 Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171 +G++ GKGF G MKR F G THG HR GS G R PGR F K MG Sbjct: 121 SGVSKGKGFQGVMKRFGFRGGPKTHGSGF-HRHAGSIGMRSTPGRCFPGSKRPSHMGTVN 179 Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VTVKNLEVV +D ++ ++LVKG +PG + + ++ R S Sbjct: 180 VTVKNLEVVKIDLEKKVLLVKGAIPGPRGSVVVIRRSS 217 >gi|293553879|ref|ZP_06674485.1| ribosomal protein L3 [Enterococcus faecium E1039] gi|291601931|gb|EFF32177.1| ribosomal protein L3 [Enterococcus faecium E1039] Length = 106 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 60/107 (56%), Positives = 74/107 (69%), Gaps = 3/107 (2%) Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165 G ++DVTG T GKGF G +KRH HG S HR GS G P RVFKNK++AG Sbjct: 2 GDIIDVTGTTKGKGFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGP-VAPNRVFKNKRLAG 59 Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 RMGGNRVT++NLEVV VD +R +IL+KG VPGAKK S I ++ + K+ Sbjct: 60 RMGGNRVTIQNLEVVRVDAERNVILIKGNVPGAKK-SLITIKSAVKA 105 >gi|213423716|ref|ZP_03356696.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 101 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 55/88 (62%), Positives = 66/88 (75%) Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 VTG + GKGF+G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG Sbjct: 1 VTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNE 60 Query: 171 RVTVKNLEVVSVDDKRGLILVKGCVPGA 198 RVTV++L+VV VD +R L+LVKG VPGA Sbjct: 61 RVTVQSLDVVRVDAERNLLLVKGGVPGA 88 >gi|170064762|ref|XP_001867661.1| mitochondrial 39S ribosomal protein L3 [Culex quinquefasciatus] gi|167882034|gb|EDS45417.1| mitochondrial 39S ribosomal protein L3 [Culex quinquefasciatus] Length = 371 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 66/222 (29%), Positives = 110/222 (49%), Gaps = 15/222 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH--------------RTLDKNGYM 47 R+GV+A+K+G ++ +G +I T+L + + VV + + KN Y Sbjct: 104 RTGVIAKKIGQYPLWRKDGTKIRTTLLQIIDNHVVKYIPPEEFEPPREPNQKRNWKNPYG 163 Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107 + VGA +K G F V PK+ L F + + +LP G+ + ++F VG Sbjct: 164 CLLVGAESRDPSIFTKEYCGLFKDSGVIPKQHLCRFIISPEARILP-GTPLNVTHFRVGD 222 Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167 VDV G T+ GF G +KRH+F G+ A+HGV+ +HR G+ G RV+ KM G M Sbjct: 223 FVDVRGKTVDHGFQGVVKRHSFKGMPASHGVTKTHRRPGNIGAGGAKARVWPGTKMPGHM 282 Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 G ++ L++ ++ K ++ V+G N + + D+ Sbjct: 283 GNRWRNLRGLKIWRINTKYNVMWVQGSNIAGDTNGLVYIYDT 324 >gi|307194194|gb|EFN76611.1| 39S ribosomal protein L3, mitochondrial [Harpegnathos saltator] Length = 348 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 68/214 (31%), Positives = 112/214 (52%), Gaps = 15/214 (7%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN----GYMAVQ------- 50 R+G++A+K+G+ ++ +G ++ T+L + + +VV + ++ G +Q Sbjct: 81 RTGLIAKKIGVYPLWLKDGTKVYSTLLQVVDNEVVKYIPPEEFYPVIGKKPIQIKRRLGC 140 Query: 51 --VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQL 108 VGAG + V+K G F V PK L F + + L P +F+ ++F G++ Sbjct: 141 LVVGAGNINPQLVTKEYSGIFKDSGVMPKLVLRRFIISPEAALQPGTPLFA-THFKPGEV 199 Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168 VD+ G TI +GF G MKR F G+ ATHGV+ +HR G+ G RV KM G MG Sbjct: 200 VDIRGKTIDRGFQGVMKRWGFKGMPATHGVTKTHRRPGNIGSGGQKARVMPGTKMPGHMG 259 Query: 169 GNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKN 201 +K +E++ ++ K ++ VKG +PG N Sbjct: 260 NRWRILKGVEILRINTKYNVLWVKGHNIPGETNN 293 >gi|297286892|ref|XP_001115583.2| PREDICTED: 39S ribosomal protein L3, mitochondrial [Macaca mulatta] Length = 243 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 108/212 (50%), Gaps = 9/212 (4%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK--PMRGFF 69 M ++ +G + VT+L + +C V+ + + + + + G V K P+ F+ Sbjct: 1 MMPLWTKDGEKHVVTLLQVQDCHVLKYTSKENHNGKTAALSVGGKTVSRFRKATPVLEFY 60 Query: 70 SSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129 + + PK+ + F + + + P G+ ++F GQ VDVT TIGKGF G +KR F Sbjct: 61 RELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGKGFQGVVKRWGF 119 Query: 130 GGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRG 187 G ATHG + +HR G STG D GRV+ KM G+MG T L+V ++ K Sbjct: 120 KGQPATHGQTKTHRRPGALSTG---DIGRVWPGTKMPGKMGNIYRTAYGLKVWRINTKHN 176 Query: 188 LILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 +I V G VPG KN + VRDS A GK Sbjct: 177 IIYVNGSVPG-HKNCLVKVRDSKLPAYKDLGK 207 >gi|116283537|gb|AAH16586.1| Mrpl3 protein [Mus musculus] Length = 243 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 78/213 (36%), Positives = 111/213 (52%), Gaps = 13/213 (6%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRT-LDKNGYMAVQVGAGEAKVKNVSKPMR--GF 68 M ++ +G++ VT+L + +C V+ + D NG +A G+ V KP F Sbjct: 1 MMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKIAALTVGGKT-VSRFYKPDSRLEF 59 Query: 69 FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128 + + + PK+ F V D+ ++ G+ ++F GQ VDVT TIGKGF G MKR Sbjct: 60 YRDLGLPPKQIHKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKGFQGVMKRWG 118 Query: 129 FGGLRATHGVSISHRSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKR 186 F G A+HG + +HR G STG D RV+ KM GRMG TV L+V V+ K Sbjct: 119 FKGQPASHGQTKTHRRPGAISTG---DIARVWPGTKMPGRMGNQNRTVYGLKVWRVNTKH 175 Query: 187 GLILVKGCVPGAKKNSWILVRDSFKSAV--NCK 217 +I V G VPG KN + ++DS A +CK Sbjct: 176 NIIYVNGSVPG-HKNCLVKIKDSTLPAYKDSCK 207 >gi|125987858|sp|Q85FW3|RK3_CYAME RecName: Full=50S ribosomal protein L3, chloroplastic Length = 182 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 70/194 (36%), Positives = 103/194 (53%), Gaps = 28/194 (14%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++A K+GM+ +++ +G +PVT + +V+ HRT +K+GY A+ V Sbjct: 7 LLATKIGMSQLFDEKGNALPVTWVKSGVHEVIDHRTPEKHGYTALVV------------- 53 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSY-FTVGQLVDVTGMTIGKGFSGA 123 + + EFRV K P+G S F +GQ V V TIGKGF+G Sbjct: 54 ----------RYQHWIREFRV-KHLSAYPIGRRLDLSTCFQIGQKVSVKAKTIGKGFAGY 102 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 KRH+F +HG S +HR GS G PGRVF +MAGR+GGN T+K LE++ + Sbjct: 103 QKRHHFARGPMSHG-SKNHRQPGSIGAGTFPGRVFPGTRMAGRLGGNFCTIKGLEILQIQ 161 Query: 184 DKRGLILVKGCVPG 197 + + + +KG VPG Sbjct: 162 NDQ--MALKGAVPG 173 >gi|30468182|ref|NP_849069.1| ribosomal protein L3 [Cyanidioschyzon merolae strain 10D] gi|30409282|dbj|BAC76231.1| 50S ribosomal protein L3 [Cyanidioschyzon merolae strain 10D] Length = 203 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 70/194 (36%), Positives = 103/194 (53%), Gaps = 28/194 (14%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++A K+GM+ +++ +G +PVT + +V+ HRT +K+GY A+ V Sbjct: 28 LLATKIGMSQLFDEKGNALPVTWVKSGVHEVIDHRTPEKHGYTALVV------------- 74 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSY-FTVGQLVDVTGMTIGKGFSGA 123 + + EFRV K P+G S F +GQ V V TIGKGF+G Sbjct: 75 ----------RYQHWIREFRV-KHLSAYPIGRRLDLSTCFQIGQKVSVKAKTIGKGFAGY 123 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 KRH+F +HG S +HR GS G PGRVF +MAGR+GGN T+K LE++ + Sbjct: 124 QKRHHFARGPMSHG-SKNHRQPGSIGAGTFPGRVFPGTRMAGRLGGNFCTIKGLEILQIQ 182 Query: 184 DKRGLILVKGCVPG 197 + + + +KG VPG Sbjct: 183 NDQ--MALKGAVPG 194 >gi|195175673|ref|XP_002028553.1| GL21035 [Drosophila persimilis] gi|194104883|gb|EDW26926.1| GL21035 [Drosophila persimilis] Length = 368 Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 70/211 (33%), Positives = 106/211 (50%), Gaps = 15/211 (7%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVV-------------VHRTLDKNGYMA 48 R GV+ARK+G ++ G+++ T+L + + V+ + R + N Y Sbjct: 104 RCGVIARKIGQYPLWLKNGKKVRTTLLQIADNHVIKYMPHEECRPQKNLSRVHNSNQYGC 163 Query: 49 VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQL 108 + VGA ++K G F V PKK + F V D L P G+ + S F VG+ Sbjct: 164 LLVGAESTNPSMLTKEYCGIFRDAGVVPKKNIMRFMVSPDGALAP-GTPLNISRFRVGEY 222 Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168 VDV G T+ GF G +KRH + G+ A+HGV+ +HR G+ G + GRV+ KM G MG Sbjct: 223 VDVRGKTVDHGFQGVVKRHGYKGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKMPGHMG 282 Query: 169 GNRVTVKNLEVVSVDDKRGLILVKG-CVPGA 198 +K L + + K ++ V+G VPG Sbjct: 283 NRWRVLKGLRIWRTNAKYNVMWVQGSSVPGP 313 >gi|195478966|ref|XP_002100716.1| GE17217 [Drosophila yakuba] gi|194188240|gb|EDX01824.1| GE17217 [Drosophila yakuba] Length = 359 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 106/212 (50%), Gaps = 18/212 (8%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQV---------- 51 R GV+ARK+G ++ G RI T+L + + V+ + + Y+ QV Sbjct: 96 RCGVIARKIGQYPLWLKNGERIRTTLLQIADNHVI--KYIPPEEYLPAQVPTVANLHKRG 153 Query: 52 ----GAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107 G+ ++K G F + V PKK L F V + L P G+ S ++F +G Sbjct: 154 CILVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEAQLEP-GTPLSVNHFRIGD 212 Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167 VDV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ KM G M Sbjct: 213 FVDVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHM 272 Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKG-CVPGA 198 G +K L V ++ K ++ V+G VPG Sbjct: 273 GNRWRKIKGLRVWRINSKYNVMWVQGSSVPGP 304 >gi|194376318|dbj|BAG62918.1| unnamed protein product [Homo sapiens] Length = 243 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 72/210 (34%), Positives = 109/210 (51%), Gaps = 5/210 (2%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVKNVSKPMRGFF 69 M ++ +G++ VT+L + +C V+ + + + NG MA + VG + + F+ Sbjct: 1 MMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSRFRKATSILEFY 60 Query: 70 SSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129 + + PK+ + F + + + P G+ ++F GQ VDVT TIGKGF G MKR F Sbjct: 61 RELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGKGFQGVMKRWGF 119 Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLI 189 G ATHG + +HR G+ D GRV+ KM G+MG T L+V ++ K +I Sbjct: 120 KGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKMGNIYRTEYGLKVWRINTKHNII 178 Query: 190 LVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 V G VPG KN + V+DS A GK Sbjct: 179 YVNGSVPG-HKNCLVKVKDSKLPAYKDLGK 207 >gi|331702080|ref|YP_004399039.1| 50S ribosomal protein L3 [Lactobacillus buchneri NRRL B-30929] gi|329129423|gb|AEB73976.1| 50S ribosomal protein L3 [Lactobacillus buchneri NRRL B-30929] Length = 211 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 114/210 (54%), Gaps = 9/210 (4%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ +K+GMT V+ G +PVTV+ + ++ +T++ +GY +VQ+G + + Sbjct: 3 RKGILGKKVGMTQVFTENGELVPVTVVEVTPNVIMQIKTVENDGYDSVQLGYADKRTVLT 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP +G N +PK+ + E KD +L V F G +VDVTG T G G Sbjct: 63 NKPEQGHAKKANTTPKRFIKEI---KDVELGDYKVSDEVKADIFKPGDIVDVTGTTKGHG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 + G + + THG S HR GS G + RV K+ GRMG VT++NLE+ Sbjct: 120 YQGNIHKDGQSRGPETHG-SRYHRRPGSLGVIIN--RVVPGMKLPGRMGNKTVTIQNLEI 176 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 V+ D ++L+KG VPGA K S+I +R + Sbjct: 177 VNADTDNNVLLIKGNVPGANK-SYITIRSA 205 >gi|323342789|ref|ZP_08083021.1| 50S ribosomal protein L3 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463901|gb|EFY09095.1| 50S ribosomal protein L3 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 230 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 113/209 (54%), Gaps = 4/209 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT V+ +G+ IPV+V+ + V+ +T++ + Y AVQ+GA + K + +K Sbjct: 3 GLLGRKLGMTQVFTTDGKLIPVSVVEVLPNVVLQKKTMESDNYEAVQLGAFDVKEQRANK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 + + +PKK + E + + VG+ F+ G+ VDVTG + G GF G+ Sbjct: 63 SEIAHAAKASTAPKKFVREIAGSEMMN-FEVGAEIKADLFSEGEYVDVTGTSRGHGFQGS 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGC-RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 + R N HG HR GS +P + K + + G+ GG T + LEV+ V Sbjct: 122 IVRANQKIGPKAHGSGF-HRGVGSLATGGLNPAVIKKGRILPGQHGGYTTTNQKLEVIKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D + +L+KG +PG KK +++V+ + K Sbjct: 181 DTESNYLLIKGNIPGPKK-GFVIVKSTVK 208 >gi|21702611|gb|AAM76007.1|AF481103_17 ribosomal protein L3 [Candidatus Tremblaya princeps] Length = 205 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/194 (35%), Positives = 99/194 (51%), Gaps = 13/194 (6%) Query: 9 KLGMTCVYNIEGRRIPVTVLHLDNCQVVVH--RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66 K+GMT + + G +PVT+L + + + R+ D+ + V + K +S+P Sbjct: 10 KVGMTRISSASGGVVPVTILDVSGNTPLRNACRSSDERVVLYRSVHS-----KRLSRPQL 64 Query: 67 GFFSSVNVSPKKKLFEFRVQK---DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 N+ P + Q +L G + + GQLV + ++GKGFSG Sbjct: 65 CACIGRNMEPAA-YSAWTAQHGMAQHGILACGRPHAKAILRAGQLVSIKARSVGKGFSGV 123 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F RA+HG S +HR+ GSTG QDPGRVF K+M GRMG T +NL V V Sbjct: 124 MKRHGFSSGRASHGTSKAHRTLGSTGMSQDPGRVFPGKRMPGRMGCEHATARNLMVEHVA 183 Query: 184 DKRGLILVKGCVPG 197 ++V+G +PG Sbjct: 184 HD--FVMVRGGIPG 195 >gi|154305466|ref|XP_001553135.1| hypothetical protein BC1G_08502 [Botryotinia fuckeliana B05.10] gi|150853289|gb|EDN28481.1| hypothetical protein BC1G_08502 [Botryotinia fuckeliana B05.10] Length = 189 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 51/112 (45%), Positives = 68/112 (60%), Gaps = 1/112 (0%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G + K GMT +Y+ E G R P TV+ LD QVV H+T +KNGY AVQVGAG Sbjct: 74 LRTGALGIKKGMTALYDPETGVRTPCTVVQLDRVQVVAHKTREKNGYYAVQVGAGWKHPS 133 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDV 111 NV++P G + V+PK+ + EFRV+ + LL VG +F GQ VD Sbjct: 134 NVTRPELGHYEKSQVAPKRYMAEFRVKNESGLLDVGRSIGAEWFIEGQFVDA 185 >gi|195566964|ref|XP_002107045.1| GD17236 [Drosophila simulans] gi|194204442|gb|EDX18018.1| GD17236 [Drosophila simulans] Length = 362 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 17/207 (8%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQV---------- 51 R GV+ARK+G ++ G RI T+L + + V+ + + Y+ QV Sbjct: 99 RCGVIARKIGQYPLWLKNGERIRTTLLQIADNHVI--KYIPPEEYLPAQVPKVANLHKRG 156 Query: 52 ----GAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107 G+ ++K G F + V PKK L F V + L P G+ + ++F +G Sbjct: 157 CILVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEAQLAP-GTPLTVNHFRIGD 215 Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167 VDV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ KM G M Sbjct: 216 FVDVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHM 275 Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGC 194 G +K L V ++ K ++ V+G Sbjct: 276 GNRWRIIKGLRVWRINTKYNVMWVQGS 302 >gi|194894275|ref|XP_001978039.1| GG17909 [Drosophila erecta] gi|190649688|gb|EDV46966.1| GG17909 [Drosophila erecta] Length = 362 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 105/212 (49%), Gaps = 18/212 (8%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQV---------- 51 R GV+ARK+G ++ G RI T+L + + V+ + + Y+ QV Sbjct: 99 RCGVIARKIGQYPLWLKNGERIRTTLLQIADNHVI--KYIPPEEYLPAQVPKIANLHKRG 156 Query: 52 ----GAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107 G+ ++K G F + V PKK L F V + L G+ S ++F +G Sbjct: 157 CILVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEAQL-EAGTPLSVNHFRIGD 215 Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167 VDV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ KM G M Sbjct: 216 FVDVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHM 275 Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKG-CVPGA 198 G +K L V ++ K ++ V+G VPG Sbjct: 276 GNRWRIIKGLRVWRINSKYNVMWVQGSSVPGP 307 >gi|195355411|ref|XP_002044185.1| GM22578 [Drosophila sechellia] gi|194129474|gb|EDW51517.1| GM22578 [Drosophila sechellia] Length = 362 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 17/207 (8%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQV---------- 51 R GV+ARK+G ++ G RI T+L + + V+ + + Y+ QV Sbjct: 99 RCGVIARKIGQYPLWLKNGERIRTTLLQIADNHVI--KYIPPEEYLPAQVPKVANLHKRG 156 Query: 52 ----GAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107 G+ ++K G F + V PKK L F V + L P G+ + ++F +G Sbjct: 157 CILVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEAQLAP-GTPLNVNHFRIGD 215 Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167 VDV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ KM G M Sbjct: 216 FVDVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHM 275 Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGC 194 G +K L V ++ K ++ V+G Sbjct: 276 GNRWRIIKGLRVWRINTKYNVMWVQGS 302 >gi|24642280|ref|NP_511166.2| mitochondrial ribosomal protein L3 [Drosophila melanogaster] gi|22832292|gb|AAF48508.2| mitochondrial ribosomal protein L3 [Drosophila melanogaster] Length = 362 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 17/207 (8%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQV---------- 51 R GV+ARK+G ++ G RI T+L + + V+ + + Y+ QV Sbjct: 99 RCGVIARKIGQYPLWLKNGERIRTTLLQIVDNHVI--KYIPPEEYLPAQVPTVANLHKRG 156 Query: 52 ----GAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107 G+ ++K G F + V PKK L F V + L P G+ + ++F VG Sbjct: 157 CILVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEAQLAP-GTPLNVNHFRVGD 215 Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167 VDV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ KM G M Sbjct: 216 FVDVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHM 275 Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGC 194 G +K L V ++ K ++ V+G Sbjct: 276 GNRWRIIKGLRVWRINTKYNVMWVQGS 302 >gi|241735550|ref|XP_002413953.1| 60S ribosomal protein L3, putative [Ixodes scapularis] gi|215507807|gb|EEC17261.1| 60S ribosomal protein L3, putative [Ixodes scapularis] Length = 390 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 71/222 (31%), Positives = 110/222 (49%), Gaps = 19/222 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQ---------- 50 +R+GV+ARK+G+ ++ G+RI T+L + + V+ R + Y + + Sbjct: 107 VRTGVIARKIGIYPMWTTSGKRILTTLLQVLDNHVI--RYIPSEEYASSRFGFKAKGRGC 164 Query: 51 --VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQL 108 VGAG A P F V PK+KL F + D + P G+ S +F G Sbjct: 165 LVVGAGSADPMLFKAPYLRLFQESGVMPKRKLTRFLITDDAAIQP-GTPLSAGHFRAGDY 223 Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168 V+V G T G GF G MKR G +HG + +HR G+ G + G + K K+M G MG Sbjct: 224 VNVYGKTRGHGFQGVMKRWKMKGGPKSHGTTKAHRRLGAIGGPR--GIILKGKRMPGHMG 281 Query: 169 GNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDS 209 R + L++ ++ K ++ V+G VPGA S++ + DS Sbjct: 282 QERRLLVGLKIWRINTKLNVLFVQGPAVPGATL-SYVNIYDS 322 >gi|21430844|gb|AAM51100.1| SD19562p [Drosophila melanogaster] Length = 362 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 17/207 (8%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQV---------- 51 R GV+ARK+G ++ G RI T+L + + V+ + + Y+ QV Sbjct: 99 RCGVIARKIGQYPLWLKNGERIRTTLLQIVDNHVI--KYIPPEEYLPAQVPTVANLHKRG 156 Query: 52 ----GAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107 G+ ++K G F + V PKK L F V + L P G+ + ++F VG Sbjct: 157 CILVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEAQLAP-GTPLNVNHFRVGD 215 Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167 VDV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ KM G M Sbjct: 216 FVDVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHM 275 Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGC 194 G +K L V ++ K ++ V+G Sbjct: 276 GNRWRIIKGLRVWRINTKYNVMWVQGS 302 >gi|332028651|gb|EGI68685.1| 39S ribosomal protein L3, mitochondrial [Acromyrmex echinatior] Length = 271 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 63/224 (28%), Positives = 119/224 (53%), Gaps = 17/224 (7%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-----NGYMAVQ------ 50 R+G++A+K+G+ ++ G+++ T+L + + ++V + +K + A+Q Sbjct: 3 RTGLIAKKIGVYPLWLKNGKKVNSTLLQVVDNEIVKYIPPEKFFPVKSKKPAIQIKNRRG 62 Query: 51 ---VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107 VGA + ++K F+ V+PK+ L F V + L P +F+ ++F G+ Sbjct: 63 CLVVGAENIDPQLITKEYYNIFNDTGVTPKRVLRRFIVSPEAALQPGTPLFA-THFKPGE 121 Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167 +VD+ G TI +GF G MKR F G+ A+HGV+ +HR G+ G + RV KM G M Sbjct: 122 IVDIRGKTIDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKSRVMPGTKMPGHM 181 Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSF 210 G ++ + ++ ++ K +I + G +PG + N++ + D+ Sbjct: 182 GNRWRIIRGVRILRINTKYNVIWILGHNIPG-EINTYCYIYDTL 224 >gi|328781504|ref|XP_625054.3| PREDICTED: 39S ribosomal protein L3, mitochondrial [Apis mellifera] Length = 364 Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 108/211 (51%), Gaps = 18/211 (8%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVV--------------HRTLDKNGYM 47 R+G++ +K+G+ ++ GR++ T++ + + +VV HR KNG + Sbjct: 101 RTGLIGKKIGVYPMWLKNGRKVLTTLIQIVDNEVVKYIPPEEYKPVKPIRHRIEVKNGCL 160 Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107 + GA + ++K G F+ V+PKK L F + + L P G+ ++F G+ Sbjct: 161 VL--GAINVDPQLLTKEYYGIFNKAGVTPKKVLMRFTISPNAVLQP-GTPLYATHFKPGE 217 Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167 +D+ G TI +GF G MKR F G+ A+HGV+ +HR G+ G RV KM G M Sbjct: 218 FIDIRGKTIDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGKLARVMPGTKMPGHM 277 Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKG-CVPG 197 G +K ++++ ++ K +I V VPG Sbjct: 278 GNRWRILKGVKILRINTKYNVIWVLAQNVPG 308 >gi|125580740|gb|EAZ21671.1| hypothetical protein OsJ_05302 [Oryza sativa Japonica Group] Length = 116 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 49/99 (49%), Positives = 66/99 (66%), Gaps = 1/99 (1%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G LVD++G +IGKGF G +KRHNF THG S SHR+ GS G PGRV+K KK Sbjct: 2 FKEGDLVDISGKSIGKGFQGGIKRHNFKRGLMTHG-SKSHRALGSIGAGTTPGRVYKGKK 60 Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKN 201 M GRMGG + ++ L++V +D+ ++++KG VPG N Sbjct: 61 MPGRMGGTKTKIRKLKIVKIDNDLKVVMIKGAVPGKPGN 99 >gi|195133722|ref|XP_002011288.1| GI16081 [Drosophila mojavensis] gi|193907263|gb|EDW06130.1| GI16081 [Drosophila mojavensis] Length = 369 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/222 (32%), Positives = 109/222 (49%), Gaps = 15/222 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49 R GV+ARK+G ++ G RI T+L + + V+ + ++ N Y V Sbjct: 105 RCGVIARKIGQYPLWLKNGERIRTTLLQVVDNHVIKYIPPEEYKPTQRPNVHNLNRYGCV 164 Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109 VGA ++K G F V P K L F V L P G+ + +F VG+ V Sbjct: 165 LVGAESTNPAQLTKEYCGIFRDSGVMPTKNLARFIVSPQAALAP-GTPLNVGHFRVGEFV 223 Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169 DV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ K+ G MG Sbjct: 224 DVRGKTVYHGFQGVVKRHGFKGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKLPGHMGN 283 Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSF 210 K L + ++ K ++ V+G VPG+ N + + D+ Sbjct: 284 RWRISKGLRIWRINTKYNVMWVQGSAVPGS-TNGLVYIYDTI 324 >gi|289740087|gb|ADD18791.1| mitochondrial ribosomal protein L3 [Glossina morsitans morsitans] Length = 367 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 68/222 (30%), Positives = 111/222 (50%), Gaps = 15/222 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVV----------VHRT--LDKNGYMAV 49 R+GV+ARK+G ++ G +I T+L + + HR + N Y + Sbjct: 102 RTGVIARKIGQYPLWLKNGEKIRTTLLQVVENHAIKYTPPEEYKPAHRPKVAELNKYGCL 161 Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109 VGA ++K F + V+PK+ L F + + P G+ + ++F VG V Sbjct: 162 LVGAESCDPSILTKEYCNLFKNSGVTPKRHLVRFLISPSAAITP-GTPLNANHFRVGDYV 220 Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169 DV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ K+ G MG Sbjct: 221 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKLPGHMGN 280 Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSF 210 K L + +++K ++ V+G +PG+ N + + DS Sbjct: 281 RWRKAKGLRIWRINNKYNVLWVQGSAIPGS-TNGLVYIYDSI 321 >gi|308487608|ref|XP_003105999.1| hypothetical protein CRE_20298 [Caenorhabditis remanei] gi|308254573|gb|EFO98525.1| hypothetical protein CRE_20298 [Caenorhabditis remanei] Length = 403 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 76/213 (35%), Positives = 101/213 (47%), Gaps = 21/213 (9%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVV---------------HRTLDKNGY 46 R G+V RK+GM + +G RI TVL +D VV + +++G Sbjct: 102 RVGLVVRKIGMLPQWTNDGNRILCTVLEVDENHVVSVTSPDSWYKASAVGKRKAFNRHGP 161 Query: 47 MA-VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP-VGSVFSPSYFT 104 M V VGAG + R F+ V K+KL F V +D LP G +F Sbjct: 162 MWRVTVGAGNDDPTKYTLAYRRQFARAGVPTKEKLGCFLVT--EDALPHAGQPLDARHFA 219 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 VGQ V TG TI GF G M R G + T + SHR GS G D R++ K+M Sbjct: 220 VGQHVTATGKTIDWGFQGGMHRWGMRG-QPTRRTTKSHRRIGSVGSVGD-ARIWPGKRMP 277 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197 G MG TV LE+V +++ + +I VKG VPG Sbjct: 278 GHMGYEWRTVSGLEIVRINNDKQVIYVKGSVPG 310 >gi|316967931|gb|EFV52284.1| electron transfer flavoprotein, alpha subunit [Trichinella spiralis] Length = 822 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 75/229 (32%), Positives = 110/229 (48%), Gaps = 25/229 (10%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLH-----LDNCQVVVHRTLDKNGYMAVQVGAGE 55 +R+G+V RK+G+ Y G R+ T+L LDN V+ T + Y ++G E Sbjct: 174 VRTGLVCRKIGVIPQYFKNGTRVLCTLLEAKEKVLDNH--VISYTDPEKWYKYSKIGKKE 231 Query: 56 A--------------KVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS 101 + + RG F V PK+KL F + + + P G+ + Sbjct: 232 GLKMLGRLTVGVQSDDPQKFTAAYRGIFEKAGVLPKQKLAAFAITPNAQIQP-GTRLYAN 290 Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 +FTVGQ VDV G TI GF G M R F G+ ATHGV+ +HR GS G V K Sbjct: 291 HFTVGQYVDVWGHTIDYGFQGVMVRWGFKGMPATHGVTKTHRRPGSIGTAGQ-ACVKPGK 349 Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGC-VPGAKKNSWILVRDS 209 KM G MG ++ ++++ ++ ++ VKG VPG + I V+DS Sbjct: 350 KMPGHMGSEWRALRGIQILRINTAEQVLYVKGPNVPGP-VGTLIYVKDS 397 >gi|290462065|gb|ADD24080.1| 39S ribosomal protein L3, mitochondrial [Lepeophtheirus salmonis] Length = 351 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 69/222 (31%), Positives = 109/222 (49%), Gaps = 28/222 (12%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSG++A+K+G+ ++ G RI T+L + + VV R + Y + VG K Sbjct: 77 IRSGIIAQKIGLAPLWTKSGVRIMSTLLQVKDNHVV--RYIPAEEYASTHVGEKIKAPKG 134 Query: 61 VSKPMRGF-----------------------FSSVNVSPKKKLFEFRVQKDDDLLPVGSV 97 ++ RG F+ VSPK+ L F V + L P G+ Sbjct: 135 ITDTPRGLNPVLVVGADSRDPSTFTKGYCGLFNGSGVSPKRILSRFIVSPNAILKP-GTP 193 Query: 98 FSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATH-GVSISHRSHGSTGCRQDPGR 156 S+F VG VDV G I +GF G MKR F G+ + + G + +HR GS G R Sbjct: 194 LYASHFQVGAYVDVRGTGIRRGFQGVMKRWGFHGMPSDNRGATKTHRRPGSIGSGCQKSR 253 Query: 157 VFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGC-VPG 197 V+ +K+ G MGGN++ + L+++ ++ K G++ V G +PG Sbjct: 254 VWPGQKLPGLMGGNKMIMPALQILRINHKEGVLYVTGQGIPG 295 >gi|195398797|ref|XP_002058007.1| GJ15729 [Drosophila virilis] gi|194150431|gb|EDW66115.1| GJ15729 [Drosophila virilis] Length = 372 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 73/223 (32%), Positives = 111/223 (49%), Gaps = 19/223 (8%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH--------------RTLDKNGYM 47 R G++ARK+G ++ G R+ T+L + + VV + + LD+ G Sbjct: 109 RCGLIARKIGQYPLWLKNGERVRTTLLQVVDNHVVKYIPPGEYTPAQRPRVKHLDRYG-- 166 Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107 V VGA ++K G F V P K L F V L P G+ + +F VG+ Sbjct: 167 CVLVGAESTNPALLTKEYCGIFRDSGVMPTKNLARFIVSPQAALAP-GTPLNVGHFRVGE 225 Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167 VDV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ KM G M Sbjct: 226 FVDVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKMPGHM 285 Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDS 209 G +K L + ++ K ++ V+G VPG+ N + + D+ Sbjct: 286 GNRWRIIKGLRIWRINTKYNVMWVQGSAVPGS-TNGLVYIYDT 327 >gi|242019299|ref|XP_002430099.1| 50S ribosomal protein L3, putative [Pediculus humanus corporis] gi|212515180|gb|EEB17361.1| 50S ribosomal protein L3, putative [Pediculus humanus corporis] Length = 327 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 66/224 (29%), Positives = 110/224 (49%), Gaps = 18/224 (8%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH--------------RTLDKNGYM 47 RSG++ K+G+ ++ G+ + T++ + + V+ + R K G + Sbjct: 51 RSGLIGIKIGVLPQWHTNGKPLLTTLIQIVDNHVISYIPPKDFIVNKKRLGRRFYKEGKL 110 Query: 48 A-VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVG 106 + VG+ + ++ G F+ V PKK L F + + P G+ ++F VG Sbjct: 111 GCLVVGSVNCDPQMFTREYNGLFAKAGVMPKKLLTRFPIHPCAAIQP-GTPLYAAHFKVG 169 Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166 VD+TG TI +GF G MKR + G+ A+HGV+ +HR G+ G + RVF KM G Sbjct: 170 DYVDITGKTIYRGFQGVMKRWGYKGMPASHGVTKTHRRPGNIGSGGEKARVFPGTKMPGV 229 Query: 167 MGGNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDS 209 G T + L + +D K ++ V G +PG NS++ V D+ Sbjct: 230 QGNKMRTTRGLTIWKIDHKYNVLYVSGDNIPG-DVNSFVYVHDT 272 >gi|195425857|ref|XP_002061179.1| GK10341 [Drosophila willistoni] gi|194157264|gb|EDW72165.1| GK10341 [Drosophila willistoni] Length = 375 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 71/222 (31%), Positives = 110/222 (49%), Gaps = 15/222 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49 R GV+ARK+G ++ G R+ T+L + + V+ + ++ + Y + Sbjct: 111 RCGVIARKIGQYPLWLKNGERVRTTLLQIVDNHVIKYTPPEEYQPSHRPSVHNLHKYGCL 170 Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109 VGA ++K G F V PKK + F V L P G+ + +F VG+ V Sbjct: 171 LVGAESTNPALLTKEYCGIFRDSGVMPKKNVARFIVSPQAALAP-GTPLNVGHFRVGEFV 229 Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169 DV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ KM G MG Sbjct: 230 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 289 Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSF 210 K L + ++ K ++ V+G VPG+ N I + D+ Sbjct: 290 RWRISKGLRIWRINTKYNVMWVQGSAVPGS-TNGLIYIYDTI 330 >gi|195059563|ref|XP_001995662.1| GH17642 [Drosophila grimshawi] gi|193896448|gb|EDV95314.1| GH17642 [Drosophila grimshawi] Length = 373 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 71/222 (31%), Positives = 110/222 (49%), Gaps = 15/222 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49 R G++ARK+G ++ G R+ T+L + + V+ + ++ N Y V Sbjct: 109 RCGLIARKIGQYPLWLKNGERVRTTLLQVVDNHVIKYIPPEEYRPTQRPNVHHLNKYGCV 168 Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109 VGA ++K G F V PKK L F V L G+ + +F VG+ V Sbjct: 169 LVGAECTNPALLTKEYCGLFRDSGVMPKKNLARFIVSPQAALA-AGTPLNVGHFRVGEFV 227 Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169 DV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ KM G MG Sbjct: 228 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 287 Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSF 210 +K L + ++ K ++ V+G VPG+ N + + D+ Sbjct: 288 RWRIIKGLRIWRINTKYNVMWVQGSAVPGS-TNGLVYIYDTI 328 >gi|294950331|ref|XP_002786576.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239900868|gb|EER18372.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 334 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 74/203 (36%), Positives = 103/203 (50%), Gaps = 13/203 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+ A K+G +++ G++ VTV + N V+ +T+ +NGY A+QVG G + Sbjct: 77 RPGICAFKIGCMGLWDEWGQKHAVTVCKVHNSHVMRQKTIARNGYEALQVGTGWRTLGLH 136 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 + G V PK + EFRV D +LPVG FS +F GQ V V+G + GKG+ Sbjct: 137 ERRRIGCCIRAGVEPKHHIEEFRVS-SDCMLPVGHEFSVRHFVPGQRVFVSGWSRGKGWQ 195 Query: 122 GAMKRHNFGG-----LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN-RVTVK 175 G + R F G AT G+ R GS +V K KK G MG + RVT Sbjct: 196 GVVTRWRFAGEGPIRCAATGGM----RMPGSISRGMSSSKVDKYKKQPGHMGPDPRVT-- 249 Query: 176 NLEVVSVDDKRGLILVKGCVPGA 198 N V ++ R LI +KG VPG+ Sbjct: 250 NCTVFRIESTRNLIFLKGAVPGS 272 >gi|114589227|ref|XP_001147526.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes] Length = 315 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 104/219 (47%), Gaps = 34/219 (15%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R G++A KLGM ++ +G++ VT+L K + Sbjct: 95 FRVGLIALKLGMMPLWTKDGQKHVVTLLQ---------------------------KATS 127 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + + F+ + + PK+ + F + + + P G+ ++F GQ VDVT TIGKGF Sbjct: 128 ILE----FYRELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGKGF 182 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G MKR F G ATHG + +HR G+ D GRV+ KM G+MG T L+V Sbjct: 183 QGVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKMGNIYRTEYGLKVW 241 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 ++ K +I V G VPG KN + VRDS A GK Sbjct: 242 RINTKHNIIYVNGSVPG-HKNCLVKVRDSKLPAYKDLGK 279 >gi|307189923|gb|EFN74159.1| 39S ribosomal protein L3, mitochondrial [Camponotus floridanus] Length = 370 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 65/226 (28%), Positives = 115/226 (50%), Gaps = 21/226 (9%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQ----------- 50 R+G++A+K+G+ ++ +G+++ T+L + + +VV + +K + V+ Sbjct: 102 RTGLIAKKIGVYPLWLKDGKKVSSTLLQIVDNEVVKYMPPEK--FHPVRSCKPPLQIKRR 159 Query: 51 -----VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105 VGA + V+K G F V PK+ L F + + L P G+ ++F Sbjct: 160 LGCLVVGAENIDPQWVTKEYYGMFKDTGVIPKRVLRRFIISPEAALQP-GTPLIAAHFKP 218 Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165 G++VD+ TI +GF G MKR F G+ A+HGV+ +HR G+ G RV KM G Sbjct: 219 GEIVDIRAKTIDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGRKARVMPGTKMPG 278 Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGC-VPGAKKNSWILVRDSF 210 MG + +++ ++ K +I +KG +PG + NS+ + D+ Sbjct: 279 HMGNKWRVHRGQQILRINTKYNIIWIKGQNIPG-EINSYCHIYDTI 323 >gi|194767737|ref|XP_001965971.1| GF11271 [Drosophila ananassae] gi|190619814|gb|EDV35338.1| GF11271 [Drosophila ananassae] Length = 354 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 70/210 (33%), Positives = 106/210 (50%), Gaps = 14/210 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49 R G +ARK+G ++ G +I T+L + + ++ + +K N + + Sbjct: 91 RCGTIARKIGEYPLWLNNGEKIRTTLLQIIDNHIISYIPPEKYSPAHYPNVKNVNKFGCL 150 Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109 VGAG ++K G F V PKK L F V + L P G+ + +++ VG+ V Sbjct: 151 LVGAGTINPTWLTKEYCGIFHESRVMPKKMLARFLVSPEAALHP-GTALNVAHYRVGEFV 209 Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169 DV G TI GF G +KR F G+ A+HGV+ +HR G+ G + GRV+ KM GRMG Sbjct: 210 DVRGKTIDYGFQGVVKRFGFKGMPASHGVTKTHRRVGNIGGGGEKGRVWPGTKMPGRMGS 269 Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGA 198 K L+V+ K ++ V+G VPG Sbjct: 270 RWRINKGLQVLRTYLKYNVMWVQGSAVPGP 299 >gi|291230696|ref|XP_002735302.1| PREDICTED: mitochondrial ribosomal protein L3-like [Saccoglossus kowalevskii] Length = 349 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 76/212 (35%), Positives = 104/212 (49%), Gaps = 13/212 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH----RTLDKNGYMAVQVGAGEAK 57 R GV+A KLGM ++ +G R+ T+L L +C V+ + T +K GY+ VGA A Sbjct: 101 RCGVIAVKLGMMPLWTKQGERLQCTLLQLQDCCVIDYIPPEETQEKYGYLY--VGAKNAS 158 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 V K F L ++F G VDVT +IG Sbjct: 159 PLYVGKAYADLFKXXXXXXXXXXXXXXXXXKRTPL------YAAHFRPGMYVDVTARSIG 212 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 GF G MKR G A+HG + +HR G+TG PGRV KKMAG+MG T NL Sbjct: 213 HGFQGVMKRWGMKGQPASHGATKTHRKMGATGGGGKPGRVRLGKKMAGQMGNQLRTEVNL 272 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +VV V+ + +I V G VPG S+++V+D+ Sbjct: 273 QVVRVNTRYNIIYVSGTVPGF-HTSFVVVKDA 303 >gi|115534155|ref|NP_498045.2| hypothetical protein C26E6.6 [Caenorhabditis elegans] gi|94730420|sp|P49404|RM03_CAEEL RecName: Full=Putative 39S ribosomal protein L3, mitochondrial gi|83921825|gb|AAA21160.3| Hypothetical protein C26E6.6 [Caenorhabditis elegans] Length = 403 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 79/232 (34%), Positives = 106/232 (45%), Gaps = 20/232 (8%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVV---------------HRTLDKNGY 46 R G+V RK+GM + EG RI TVL +D VV + +++G Sbjct: 102 RVGLVVRKIGMLPQWTNEGNRILCTVLEVDENHVVSITSPEAWYKSSAVGKRKAFNRHGP 161 Query: 47 MA-VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105 M V VGAG + R F + K+KL F V +D L G +F V Sbjct: 162 MWRVTVGAGNDDPTKYTLGYRRQFVRAGIPVKEKLGCFLVT-EDALPSAGQPLDARHFGV 220 Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165 GQ V TG TI GF G M R G + T + SHR GS G D R++ K+M G Sbjct: 221 GQYVTATGKTIDWGFQGGMHRWGMRG-QPTRRTTKSHRRIGSVGSVGD-ARIWPGKRMPG 278 Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 MG TV LE+V ++ + +I VKG VPG + IL++D + K Sbjct: 279 HMGYEWRTVSGLEIVRINVDKQVIYVKGSVPGDIGET-ILLKDCLQEEKRLK 329 >gi|260798664|ref|XP_002594320.1| hypothetical protein BRAFLDRAFT_201187 [Branchiostoma floridae] gi|229279553|gb|EEN50331.1| hypothetical protein BRAFLDRAFT_201187 [Branchiostoma floridae] Length = 242 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 55/141 (39%), Positives = 76/141 (53%), Gaps = 3/141 (2%) Query: 69 FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128 F + PK+K+ EF+V D + P G+ ++F GQ VDV G TI KGF G MKRH Sbjct: 47 FEKAGIPPKRKIAEFKVSMDAAIKP-GTPLYAAHFRPGQYVDVYGKTIDKGFQGVMKRHG 105 Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188 F G A+HG + +HR G+ G GRV K+ G MG + L++ V+ K + Sbjct: 106 FKGQPASHGQTKTHRRPGAIGTAGH-GRVLPGTKLPGPMGNVVRYTRGLKIWRVNTKHNI 164 Query: 189 ILVKGCVPGAKKNSWILVRDS 209 + V G VPG + W+ V DS Sbjct: 165 LYVNGQVPG-HNDGWVKVYDS 184 >gi|268574488|ref|XP_002642221.1| Hypothetical protein CBG18195 [Caenorhabditis briggsae] gi|187025223|emb|CAP35690.1| hypothetical protein CBG_18195 [Caenorhabditis briggsae AF16] Length = 402 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 100/213 (46%), Gaps = 21/213 (9%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVV---------------VHRTLDKNGY 46 R G+V RK+GM + EG RI T+L +D VV + +++G Sbjct: 102 RVGLVVRKIGMLPQWTKEGGRILCTILEVDENHVVGITSPDSWYKASAIGKRKAFNRHGP 161 Query: 47 MA-VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPV-GSVFSPSYFT 104 M V VGA N + R F+ V K+ L F V +D LP+ G +F Sbjct: 162 MWRVTVGATNQDPTNYTSAYRKKFTRAGVPVKETLGCFLV--TEDALPLLGQPLDARHFE 219 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 VGQ V TG TI GF G M R G + T + SHR GS G D R++ K+M Sbjct: 220 VGQYVTATGKTIDWGFQGGMHRWGMRG-QPTRRTTKSHRRIGSVGSVGD-ARIWPGKRMP 277 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197 G MG TV LE+V ++ + ++ VKG VPG Sbjct: 278 GHMGYEWKTVSGLEIVRINIDKQVMYVKGSVPG 310 >gi|221125421|ref|XP_002162736.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 271 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 109/205 (53%), Gaps = 9/205 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTL----DKNGYMAVQVGAGEA 56 +R G + KLG++ ++ G VT++ + +CQV+ + +G + +G + Sbjct: 13 IRVGALGIKLGVSVLWTKNGFCHMVTLVQIKDCQVIDTQISCEDGGNDGITQMLLGCCDI 72 Query: 57 KVKNV-SKPMRG---FFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 NV +K R ++ N+ PK+ F V K+ L P G+ + +F GQ V V Sbjct: 73 TDDNVLAKLPRDHVLWYDQRNLFPKQYWTGFPVTKNALLFP-GTKITSLHFQPGQHVVVQ 131 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++I KGF G M+R G +HG +++HR G TG QDPGR+F K MAG +G + Sbjct: 132 GISIDKGFQGVMRRWGMKGQPQSHGQTLTHRKMGGTGGGQDPGRIFPGKHMAGHVGRDYA 191 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPG 197 TV L ++ ++ K ++ ++G +PG Sbjct: 192 TVGPLRILRINTKFNVLYIRGGIPG 216 >gi|323304802|gb|EGA58561.1| Mrpl9p [Saccharomyces cerevisiae FostersB] Length = 119 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 47/94 (50%), Positives = 64/94 (68%), Gaps = 1/94 (1%) Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR+ F GLRA+HG SI HR GS G QDPGRV +KM G MG VT++N++V+ VD Sbjct: 1 MKRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVLKVD 60 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 D+ +I VKG V G KNS++ ++D+ K ++ K Sbjct: 61 DENNVIWVKGSVAGP-KNSFVKIQDAIKKNLSIK 93 >gi|324516671|gb|ADY46600.1| 39S ribosomal protein L3 [Ascaris suum] Length = 401 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 76/232 (32%), Positives = 108/232 (46%), Gaps = 20/232 (8%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVV--------------HRTLDKNGY 46 R G++ARKLGM + G R+ T+L +NC V + G Sbjct: 96 RVGLLARKLGMLPQWLNNGTRVLCTMLEFPENCVVSAIDPETWYRKSIVGKKKAFGIQGP 155 Query: 47 MA-VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105 M V VGA A + R F + K+ L F V +D + P G+ +F+V Sbjct: 156 MWKVTVGAVNADPSKFTHVYRDIFMRQGLPVKQHLGSFVVTEDAVVAP-GTPLHVCHFSV 214 Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165 GQ + VTG TI GF G M R G+ A + SHR GS G D RV+ K+M G Sbjct: 215 GQYIAVTGRTIDWGFQGGMHRWGMKGMPANR-TTKSHRRIGSIGSTGD-ARVWPGKRMPG 272 Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 MG VT LEV+ ++ + ++ +KGCVPG + +LV+D + + K Sbjct: 273 HMGYEWVTTSGLEVLRINPGKQVMYIKGCVPG-EVGEILLVKDCLQPSKRVK 323 >gi|406362|gb|AAD12434.1| unknown [Mycoplasma genitalium] Length = 154 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 56/156 (35%), Positives = 84/156 (53%), Gaps = 7/156 (4%) Query: 23 IPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFE 82 +P+T+++ + QV +T+ K+ Y A + K ++KP +GFFS + + P K L E Sbjct: 2 LPITIVYCEANQVAGIKTIAKDNYNATLLSFQTVDEKQLNKPKQGFFSKLKLEPHKYLRE 61 Query: 83 FRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSIS 141 R + +L G +P F +G+ VDVT +T G+GF+GA+KR NF HG Sbjct: 62 IRKMQGFEL---GKKITPQELFKIGEYVDVTSLTKGRGFTGAIKRWNFKIGPLGHGAGYP 118 Query: 142 HRSHGSTGCRQ---DPGRVFKNKKMAGRMGGNRVTV 174 HR GS + RVFK KKM+G G +VT+ Sbjct: 119 HRFQGSVQAGRGGSSAQRVFKGKKMSGHYGHEQVTI 154 >gi|322799942|gb|EFZ21068.1| hypothetical protein SINV_02593 [Solenopsis invicta] Length = 366 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 114/234 (48%), Gaps = 19/234 (8%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQ----------- 50 R+G++A+K+G+ ++ G+++ T+L + + +VV + +K Y V+ Sbjct: 99 RTGLIAKKIGVYPLWLKNGKKVTSTLLQIVDNEVVKYIPPEK--YNPVKSKRPPIQVKKR 156 Query: 51 -----VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105 VGA + ++K F+ V PK+ L F + + L P +F+ ++F Sbjct: 157 RGCLVVGAENINPQLITKEYYSIFNDTGVMPKRVLRRFVISPEAALQPGTPLFA-THFKP 215 Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165 G++VD+ G T+ +GF G MKR F G A+HG + +HR G+ G RV KM G Sbjct: 216 GEVVDIRGKTVDRGFQGVMKRWGFHGQPASHGQTKTHRRPGNIGSGGTKARVMPGTKMPG 275 Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 MG ++ + ++ ++ K +I V G + N+++ + D+ K K Sbjct: 276 HMGNRWRILRGVRILRINTKYNVIWVLGHNLPGETNNYVYMYDTLLPLRQFKTK 329 >gi|256087284|ref|XP_002579802.1| 50S ribosomal protein L3 [Schistosoma mansoni] gi|238665289|emb|CAZ36041.1| 50S ribosomal protein L3, putative [Schistosoma mansoni] Length = 394 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 30/235 (12%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQ---------- 50 R G++A KLG+ ++ G+++ T+ + DN + + + Y+++ Sbjct: 96 RCGLIAIKLGVYPLWTKTGKKMDCTIFQIPDNHAIRYTPPSEIDKYISLLHPRHYWLNNK 155 Query: 51 ---------------VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG 95 VGA A + G F + PK+K+ F V D L P G Sbjct: 156 RPPSWITQKRWGIQLVGAFSADPIEFTSEWCGLFKEAGIPPKRKISRFLVSPDAALKP-G 214 Query: 96 SVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 + S ++F VG +D+T TI +GF G ++R G A HG + HR GS R P Sbjct: 215 TPLSVNHFRVGDYLDITARTINRGFEGVIERWGMKGGPAAHGSTKFHRRMGSAAGRGGP- 273 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 + + K+MAG MG +++ + +V ++ K GLI V G PG +S+ L+ DS+ Sbjct: 274 -IVRGKRMAGVMGNRFRSLRGVMIVRINPKLGLIYVPGTTPGP-VHSYCLLNDSW 326 >gi|169603664|ref|XP_001795253.1| hypothetical protein SNOG_04840 [Phaeosphaeria nodorum SN15] gi|160706431|gb|EAT87231.2| hypothetical protein SNOG_04840 [Phaeosphaeria nodorum SN15] Length = 190 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 42/92 (45%), Positives = 63/92 (68%), Gaps = 1/92 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G++A K GMT +Y+ G+R TVL LD VV H+T +KNGY AVQ+GAG+ + + Sbjct: 80 LRTGLLALKRGMTAIYDPTTGKRAACTVLQLDRNVVVAHKTREKNGYWAVQIGAGQKEAR 139 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL 91 NV+KPM G F+ +PK+ + EF+V+ + L Sbjct: 140 NVTKPMLGHFAKAETAPKRWVVEFKVKGQEGL 171 >gi|323337449|gb|EGA78698.1| Mrpl9p [Saccharomyces cerevisiae Vin13] Length = 119 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 45/87 (51%), Positives = 60/87 (68%), Gaps = 1/87 (1%) Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR+ F GLRA+HG SI HR GS G QDPGRV +KM G MG VT++N++V+ VD Sbjct: 1 MKRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVLKVD 60 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSF 210 D+ +I VKG V G KNS++ ++D+ Sbjct: 61 DENNVIWVKGSVAGP-KNSFVKIQDAI 86 >gi|146332291|gb|ABQ22651.1| mitochondrial 39S ribosomal protein L3-like protein [Callithrix jacchus] Length = 173 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 58/129 (44%), Positives = 73/129 (56%), Gaps = 7/129 (5%) Query: 83 FRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISH 142 FR+ + L P G+ ++F GQ VDVT TIGKGF G MKR F G ATHG + +H Sbjct: 4 FRITDNAALKP-GTPLYAAHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTH 62 Query: 143 RSHG--STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKK 200 R G STG D RV+ K+ G+MG TV L+V ++ K +I V G VPG K Sbjct: 63 RRPGAISTG---DVARVWPGTKLPGQMGNIDRTVHGLKVWRINTKHNIIYVNGSVPG-HK 118 Query: 201 NSWILVRDS 209 N + VRDS Sbjct: 119 NCLVKVRDS 127 >gi|157165062|ref|YP_001467720.1| 50S ribosomal protein L3 [Campylobacter concisus 13826] gi|157101500|gb|ABV23519.1| ribosomal protein L3 [Campylobacter concisus 13826] Length = 192 Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 66/193 (34%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ I + PVT+L L +V +D+N V +A K ++ Sbjct: 4 IVEKIGMS--RTIATKSTPVTLLKLVEAKVC---EIDENKRAIVAYAHTKANNKAIAGQQ 58 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV-FSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + + + + K V + VG++ F+P +++ V+ + G+G+ G + Sbjct: 59 KKYNLTAEFN---KFATLEVANSE----VGNLDFTP--LNEAKILKVSFNSKGRGYQGVV 109 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH FGG +HG S HR HGS G + PGRV KMAG MG +VTVKN E++S D Sbjct: 110 KRHGFGGGPKSHG-SRFHRRHGSIGNCEWPGRVQPGMKMAGHMGNEKVTVKN-ELISFDA 167 Query: 185 KRGLILVKGCVPG 197 + G+++VKGCVPG Sbjct: 168 QNGIVVVKGCVPG 180 >gi|222823103|ref|YP_002574676.1| 50S ribosomal protein L3 [Campylobacter lari RM2100] gi|222538324|gb|ACM63425.1| 50S ribosomal protein L3 [Campylobacter lari RM2100] Length = 191 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 71/196 (36%), Positives = 100/196 (51%), Gaps = 24/196 (12%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDN---CQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 + K+GM+ I IPVT+L L C+V +NG V G+A K ++ Sbjct: 4 IVEKIGMS--RTISTPSIPVTLLKLVQTKVCEV-------ENGKALVAYVKGKANNKCIA 54 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 + + S + L + D DL P+ ++ V+ + G+G+S Sbjct: 55 GQQKKYNLSAEYNRFASLEVANTEAGDIDLNPLKEA---------SILKVSFNSKGRGYS 105 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRH F G A+HG S HR HGS G R+ PGRV KMAG G +VTVKN EVVS Sbjct: 106 GVVKRHGFAGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGHYGNVKVTVKN-EVVS 163 Query: 182 VDDKRGLILVKGCVPG 197 D++ G+++VKG VPG Sbjct: 164 FDEENGILVVKGAVPG 179 >gi|154175439|ref|YP_001409153.1| 50S ribosomal protein L3 [Campylobacter curvus 525.92] gi|153793233|gb|EAT99616.2| ribosomal protein L3 [Campylobacter curvus 525.92] Length = 192 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 66/193 (34%), Positives = 102/193 (52%), Gaps = 17/193 (8%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ I + PVT+L L +V +D+N V +A K ++ Sbjct: 4 IVEKIGMS--RTISTQSTPVTLLKLVEAKVC---EIDENKRAIVAYAHTKANNKTIAGQQ 58 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV-FSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + + + + K V + VG++ F+P + +++ V+ + G+G+ G + Sbjct: 59 KKYNLTAEFN---KFATLEVANSE----VGNLDFTP--LSEAKILKVSFNSKGRGYQGVV 109 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH F G +HG S HR HGS G + PGRV KMAG MG +VTVKN E+VS D Sbjct: 110 KRHGFSGGPKSHG-SRFHRRHGSIGNCEWPGRVQPGMKMAGHMGNEKVTVKN-ELVSFDA 167 Query: 185 KRGLILVKGCVPG 197 + G+++VKGCVPG Sbjct: 168 ENGIVVVKGCVPG 180 >gi|57238730|ref|YP_179845.1| 50S ribosomal protein L3 [Campylobacter jejuni RM1221] gi|121613090|ref|YP_001001351.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 81-176] gi|148926798|ref|ZP_01810477.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni CG8486] gi|153952159|ref|YP_001398986.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. doylei 269.97] gi|157415929|ref|YP_001483185.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 81116] gi|167006240|ref|ZP_02271998.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 81-176] gi|205355721|ref|ZP_03222491.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni CG8421] gi|283956163|ref|ZP_06373648.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 1336] gi|305432598|ref|ZP_07401759.1| 50S ribosomal protein L3 [Campylobacter coli JV20] gi|315125092|ref|YP_004067096.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|57167534|gb|AAW36313.1| ribosomal protein L3 [Campylobacter jejuni RM1221] gi|121504221|gb|EAQ71912.2| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 81-176] gi|145844523|gb|EDK21630.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni CG8486] gi|152939605|gb|ABS44346.1| ribosomal protein L3 [Campylobacter jejuni subsp. doylei 269.97] gi|157386893|gb|ABV53208.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 81116] gi|205346498|gb|EDZ33131.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni CG8421] gi|283792317|gb|EFC31101.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 1336] gi|304444309|gb|EFM36961.1| 50S ribosomal protein L3 [Campylobacter coli JV20] gi|307748567|gb|ADN91837.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni M1] gi|315018814|gb|ADT66907.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315059153|gb|ADT73482.1| LSU ribosomal protein L3p [Campylobacter jejuni subsp. jejuni S3] gi|315931325|gb|EFV10294.1| ribosomal protein L3 family protein [Campylobacter jejuni subsp. jejuni 327] Length = 191 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 2/91 (2%) Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166 +++ V+ T G+G+SG MKRHNF G A+HG S HR HGS G R+ PGRV KMAG Sbjct: 91 KILKVSFNTKGRGYSGVMKRHNFAGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGH 149 Query: 167 MGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197 G +VTVKN EVVS D + +++VKG VPG Sbjct: 150 YGNTKVTVKN-EVVSYDAENKILVVKGAVPG 179 >gi|296005215|ref|XP_002808939.1| organelle ribosomal protein L3 precursor, putative [Plasmodium falciparum 3D7] gi|225631825|emb|CAX64220.1| organelle ribosomal protein L3 precursor, putative [Plasmodium falciparum 3D7] Length = 317 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 7/211 (3%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 + RK+ M +++ +G IP T++ + V++R LD G + + G + + + KP Sbjct: 97 IRGRKIEMKSIFSPQGDLIPATLIEI--MPNVIYRFLD-FGKVGIAYGKPLDESRWILKP 153 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G + V + K + +L G + SY + V+V G++ GKGF G + Sbjct: 154 EIGQIAKVGCNLKNTCSLTLTPPQNFVL--GQIIDVSYLYNYKYVNVRGLSKGKGFCGVI 211 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR F +HG S HR GS G GRV K KKM G+ G T+ NL+++ ++ Sbjct: 212 KRWGFKRGPMSHGSS-HHRKPGSIGASTHIGRVLKGKKMPGKHGNKYRTMINLKLLGLNL 270 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +R ILV GC+PG +NS++ V + + VN Sbjct: 271 ERNEILVSGCIPG-NRNSYVTVTATRDNKVN 300 >gi|82753677|ref|XP_727774.1| ribosomal protein L3 [Plasmodium yoelii yoelii str. 17XNL] gi|23483784|gb|EAA19339.1| ribosomal protein L3, putative [Plasmodium yoelii yoelii] Length = 315 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 110/214 (51%), Gaps = 7/214 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R + +K+ M +++ G+ IP T++ + +++R LD G + + G + + + Sbjct: 92 RIQIRGKKIEMRSIFSPNGKLIPATLIKI--MPNIIYRFLDF-GKVGIAYGKPLNESRWI 148 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP G S +N S K + + + +G + SY + V+V G++ GKGFS Sbjct: 149 LKPEIGQISKIN-SNLKNTCSLTLTPPQNFV-LGQIIDVSYLYNYKYVNVRGLSKGKGFS 206 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F THG S HR GS G GRV K KKM G+ G T+ NL+++ Sbjct: 207 GVIKRWGFHRGPMTHG-SGHHRKPGSIGASTHIGRVLKGKKMPGKDGNKYRTMINLKLLG 265 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++ +R ILV GC+PG +NS + V + + +N Sbjct: 266 LNLERNEILVSGCIPG-NRNSDVTVTATRDNKIN 298 >gi|218563293|ref|YP_002345073.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|42559704|sp|Q9PLX1|RL3_CAMJE RecName: Full=50S ribosomal protein L3 gi|112361000|emb|CAL35801.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926898|gb|ADC29250.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni IA3902] gi|315926634|gb|EFV06014.1| ribosomal protein L3 family protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930642|gb|EFV09664.1| ribosomal protein L3 family protein [Campylobacter jejuni subsp. jejuni 305] Length = 191 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/91 (52%), Positives = 62/91 (68%), Gaps = 2/91 (2%) Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166 +++ V+ T G+G+SG MKRHNF G A+HG S HR HGS G R+ PGRV KMAG Sbjct: 91 KILKVSFNTKGRGYSGVMKRHNFAGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGH 149 Query: 167 MGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197 G +VT+KN EVVS D + +++VKG VPG Sbjct: 150 YGNTKVTIKN-EVVSYDAENKILVVKGAVPG 179 >gi|283953682|ref|ZP_06371213.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 414] gi|283794723|gb|EFC33461.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 414] Length = 191 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 2/91 (2%) Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166 +++ V+ T G+G+SG MKRHNF G A+HG S HR HGS G R+ PGRV KMAG Sbjct: 91 KILKVSFNTKGRGYSGVMKRHNFSGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGH 149 Query: 167 MGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197 G +VTVKN EVVS D + +++VKG VPG Sbjct: 150 YGNTKVTVKN-EVVSYDAENKILVVKGAVPG 179 >gi|156097364|ref|XP_001614715.1| 50S ribosomal protein L3 [Plasmodium vivax SaI-1] gi|148803589|gb|EDL44988.1| 50S ribosomal protein L3, putative [Plasmodium vivax] Length = 316 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 109/214 (50%), Gaps = 7/214 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R + +K+ M +++ G+ IP T++ + V++R LD G + + G + + + Sbjct: 93 RIQIRGKKIEMRSIFSPNGKLIPATLIEI--MPNVIYRFLD-FGKVGIAYGKPLEESRWI 149 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP G + V + K + +L G + SY + V+V G++ GKGF Sbjct: 150 LKPEIGQIAKVGCNYKNTCSLTLTPPQNFVL--GQIIDVSYLYNYKYVNVRGLSKGKGFC 207 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F THG S HR GS G GRV K KKM G+ G T+ NL+++ Sbjct: 208 GVIKRWGFRRGPMTHGSS-HHRKPGSIGASTHIGRVLKGKKMPGKHGNKYNTMINLKLLG 266 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++ +R ILV GC+PG +NS++ V + ++ V+ Sbjct: 267 LNLERNEILVSGCIPG-NRNSYVTVTATRENRVD 299 >gi|70943067|ref|XP_741624.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56520122|emb|CAH76721.1| large ribosomal subunit protein L3, prokaryotic (50S)-like, putative [Plasmodium chabaudi chabaudi] Length = 223 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 109/211 (51%), Gaps = 7/211 (3%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 + +K+ M +++ G+ IP T++ + +++R LD G + + G + + + KP Sbjct: 3 IRGKKIEMRSIFSPNGKLIPATLIKI--MPNIIYRFLDF-GKVGIAYGKPLNESRWILKP 59 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G S +N S K + + + +G + SY + V+V G++ GKGFSG + Sbjct: 60 EIGQISKIN-SNLKNTCSLTLTPPQNFV-LGQIIDVSYLYNYKYVNVRGLSKGKGFSGVI 117 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR F THG S HR GS G GRV K KKM G+ G T+ NL+++ ++ Sbjct: 118 KRWGFRRGPMTHG-SGHHRKPGSIGASTHIGRVLKGKKMPGKDGNKFRTMINLKLLGLNL 176 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +R ILV GC+PG +NS + V + + +N Sbjct: 177 ERNEILVSGCIPG-NRNSDVTVTATRDNKIN 206 >gi|328478154|gb|EGF48001.1| 50S ribosomal protein L3 [Lactobacillus rhamnosus MTCC 5462] Length = 159 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 59/163 (36%), Positives = 89/163 (54%), Gaps = 5/163 (3%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 +G G+ + +KP G + +PK+ + E R D VGS F G +VD Sbjct: 1 MGYGDMREVLTNKPSVGHAKKADTTPKRFVREIRDVALSDY-EVGSEVKADEFAAGDIVD 59 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 VTG + G G+ G +K+ HG S HR GS G + +VFK KK+ GRMG + Sbjct: 60 VTGTSKGHGYQGNIKKDGQSRGPMAHG-SRYHRRPGSLGAIIN--KVFKGKKLPGRMGNH 116 Query: 171 RVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 T++NL+VV+ D + ++L+KG VPGA K S++ +R + K+A Sbjct: 117 TRTMQNLQVVAADTEHNVLLIKGNVPGANK-SFVTIRSAVKAA 158 >gi|223038516|ref|ZP_03608810.1| 50S ribosomal protein L3 [Campylobacter rectus RM3267] gi|222880373|gb|EEF15460.1| 50S ribosomal protein L3 [Campylobacter rectus RM3267] Length = 192 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 102/200 (51%), Gaps = 31/200 (15%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ N IPVT+L + N +V + + G V G+AK K + Sbjct: 4 IVEKIGMSRTVN--NPSIPVTLLKVVNAKVC---EVSECGSAIVAYAKGKAKNKAIEGQQ 58 Query: 66 RGF--------FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 + + F+++ V+ K+ D D P+ S +++ V+ + G Sbjct: 59 KKYSLTAEFNKFATLQVANKE-------AGDLDFSPLSSA---------KILKVSFSSKG 102 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KG+ G +KRH FGG +HG S H+ HGS G R+ PGRV KMAG G +VTVKN Sbjct: 103 KGYQGVVKRHGFGGGPKSHG-SRFHKRHGSIGNREWPGRVQPGMKMAGHTGNEKVTVKN- 160 Query: 178 EVVSVDDKRGLILVKGCVPG 197 E+VS D + G++++KG V G Sbjct: 161 EIVSFDAENGILVLKGSVAG 180 >gi|68073103|ref|XP_678466.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56498943|emb|CAH95840.1| large ribosomal subunit protein L3, prokaryotic (50S)-like, putative [Plasmodium berghei] Length = 221 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 63/198 (31%), Positives = 102/198 (51%), Gaps = 6/198 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R + +K+ M +++ G+ IP T++ + +++R LD G + + G + + + Sbjct: 29 RIQIRGKKIEMRSIFSPNGKLIPATLIKI--MPNIIYRFLDF-GKVGIAYGKPLNESRWI 85 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP G S +N S K + + + +G + SY + V+V G++ GKGFS Sbjct: 86 LKPEIGQISKIN-SNFKNTCSLTLTPPQNFV-LGQIIDVSYLYNYKYVNVRGLSKGKGFS 143 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F THG S HR GS G GRV K KKM G+ G T+ NL+++ Sbjct: 144 GVIKRWGFHRGPMTHG-SGHHRKPGSIGASTHVGRVLKGKKMPGKDGNKFRTMINLKLLG 202 Query: 182 VDDKRGLILVKGCVPGAK 199 ++ +R ILV GC+PG + Sbjct: 203 LNLERNEILVSGCIPGNR 220 >gi|260891594|ref|ZP_05902857.1| hypothetical protein GCWU000323_02809 [Leptotrichia hofstadii F0254] gi|260858702|gb|EEX73202.1| ribosomal protein L3 [Leptotrichia hofstadii F0254] Length = 90 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 47/89 (52%), Positives = 61/89 (68%), Gaps = 2/89 (2%) Query: 124 MKRHNFGGLRATHGVSISHRSHGS-TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNFGG RA+HGVS +HR GS G V K KKMAGR+G +VTV+NL+V+ Sbjct: 1 MKRHNFGGNRASHGVSRNHRLGGSNAGGAASNSNVPKGKKMAGRLGAEKVTVQNLQVIKY 60 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D + L+LVKG VPG KN +++++ S K Sbjct: 61 DVENSLLLVKGAVPGP-KNGYLVIKKSVK 88 >gi|227871802|ref|ZP_03990206.1| possible ribosomal protein L3 [Oribacterium sinus F0268] gi|227842365|gb|EEJ52591.1| possible ribosomal protein L3 [Oribacterium sinus F0268] Length = 128 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 53/131 (40%), Positives = 72/131 (54%), Gaps = 3/131 (2%) Query: 82 EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSIS 141 EFR + ++ V F G VDV+ + GKGF+ A+K++ THG S Sbjct: 1 EFRFENAEEY-KVKDEIKADIFAEGDKVDVSATSKGKGFASAIKKYGQHRGPMTHG-SKF 58 Query: 142 HRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKN 201 HR GS G P RV K M MG +VT +NL VV VD ++GLILVKG VPG KK Sbjct: 59 HRHQGSNGTSATPSRVLPGKGMPSHMGAVKVTTQNLTVVKVDAEQGLILVKGAVPGPKK- 117 Query: 202 SWILVRDSFKS 212 + + ++++ KS Sbjct: 118 ALVTIKEAVKS 128 >gi|325116477|emb|CBZ52031.1| putative 50S ribosomal protein L3 [Neospora caninum Liverpool] Length = 447 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 96/204 (47%), Gaps = 28/204 (13%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ARK+ MT ++ +G+ PVT+L + +V + G V A + + V +P Sbjct: 199 LLARKIDMTACFSPDGQAEPVTLLQVIPATIV---QFLEYGKAVVSYDAPKRRRLFVKRP 255 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT-----------G 113 + G V + FE +V P+ F +GQ++DV+ Sbjct: 256 VLGKLQRVGAT----GFETATL---------TVRPPNEFVLGQVLDVSSLMGAKHVHVRA 302 Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 + KGF G + RH F THG S HR GS G DPGRV +MAGR T Sbjct: 303 LKKAKGFQGIVSRHGFHRGPMTHG-STHHRGPGSVGAGTDPGRVLPGTRMAGRDKAKYAT 361 Query: 174 VKNLEVVSVDDKRGLILVKGCVPG 197 V+NL V+ + K+ L++V+G VPG Sbjct: 362 VRNLRVLGFNPKQNLLIVRGSVPG 385 >gi|221054630|ref|XP_002258454.1| large ribosomal subunit protein l3, prokaryotic (50s)-like [Plasmodium knowlesi strain H] gi|193808523|emb|CAQ39226.1| large ribosomal subunit protein l3, prokaryotic (50s)-like, putative [Plasmodium knowlesi strain H] Length = 315 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 103/205 (50%), Gaps = 7/205 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R + +K+ M +++ G IP T++ + V++R LD G + + G + + + Sbjct: 92 RIQIRGKKIEMRSIFSPNGELIPATLIEI--MPNVIYRFLDF-GKVGIAYGKPLDESRWI 148 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP G + V + K + +L G + SY + V+V G++ GKGF Sbjct: 149 LKPEIGQIAKVGCNYKNTCSLTLTPPQNFVL--GQIIDVSYLYNYKYVNVRGLSKGKGFC 206 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F THG S HR GS G GRV K KKM G+ G T+ NL+++ Sbjct: 207 GVIKRWGFRRGPMTHGSS-HHRKPGSIGASTHIGRVLKGKKMPGKHGNKYRTMINLKLLG 265 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 ++ +R ILV GC+PG +NS++ V Sbjct: 266 LNLERNEILVSGCIPG-NRNSYVTV 289 >gi|57505356|ref|ZP_00371285.1| ribosomal protein L3 [Campylobacter upsaliensis RM3195] gi|57016492|gb|EAL53277.1| ribosomal protein L3 [Campylobacter upsaliensis RM3195] Length = 192 Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 46/100 (46%), Positives = 65/100 (65%), Gaps = 2/100 (2%) Query: 98 FSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRV 157 S +++ V+ + G+G+SG MKRHNFGG A+HG S HR HGS G R+ PGRV Sbjct: 83 LDESPLNEAKILKVSFNSKGRGYSGVMKRHNFGGGPASHG-SRFHRRHGSIGNREWPGRV 141 Query: 158 FKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197 KMAG+ G +++VKN E+VS D + ++++KG VPG Sbjct: 142 QPGMKMAGQYGNTKISVKN-ELVSYDAENKILVLKGAVPG 180 >gi|315453735|ref|YP_004074005.1| 50S ribosomal protein L3 [Helicobacter felis ATCC 49179] gi|315132787|emb|CBY83415.1| 50S ribosomal protein L3 [Helicobacter felis ATCC 49179] Length = 190 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 72/200 (36%), Positives = 103/200 (51%), Gaps = 32/200 (16%) Query: 6 VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57 + +K+GM+ V + + +PVT+L + + QV+V L K A+ AG+ K Sbjct: 4 LVQKIGMSRV--VGAQSVPVTLLKVLESKVCEIKDKQVLVAYPLHKTHNKAI---AGQQK 58 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 N+SK F + + +V + DL P+ + S + + T T G Sbjct: 59 KYNLSKEFNHFAT----------LDAQVTELGDL-PLEPLESAKH------IKATFYTKG 101 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 +GFSGAMKR NF G A HG S HR GS G R+ PGRV K KKMAG G +VT N Sbjct: 102 RGFSGAMKRWNFQGGPAAHG-SRFHRRLGSIGNREWPGRVQKGKKMAGHYGNEKVTCHN- 159 Query: 178 EVVSVDDKRGLILVKGCVPG 197 EV+S D + ++++KG V G Sbjct: 160 EVLSFDKESKILVLKGSVVG 179 >gi|326505122|dbj|BAK02948.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 403 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 20/225 (8%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHL-----------------DNCQVVVHRTLDKN 44 R G++A KLG + +G+++ +T+L + N V+ RT + Sbjct: 115 RIGLIAVKLGSIPQWTNDGKKVYLTMLQVLDNHVIDYVPPEVIMSKSNNSVLKSRTKEGR 174 Query: 45 GYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 MA+ VGA + + + F + V PK+KL +F + + + P +F+ S+F Sbjct: 175 LGMAI-VGALSSDPRLYTPSYLKLFENSGVPPKRKLTKFMITPNAAVQPGTPLFA-SHFR 232 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 VG VDV TIG GF G MKR F G +HG + HR G+ G +D + K KMA Sbjct: 233 VGDYVDVGAKTIGYGFQGVMKRWGFKGGPRSHGATKFHRKRGTIGSGRD-RKPIKGMKMA 291 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 G MG L+V +++K ++ V+G V + ++ V DS Sbjct: 292 GHMGCKWRIQFGLKVWRINNKYNILYVQGPVIPGPTHCYVRVVDS 336 >gi|255321773|ref|ZP_05362928.1| 50S ribosomal protein L3 [Campylobacter showae RM3277] gi|255301253|gb|EET80515.1| 50S ribosomal protein L3 [Campylobacter showae RM3277] Length = 192 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 102/200 (51%), Gaps = 31/200 (15%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ N IPVT+L + N +V + + G V G+AK K + Sbjct: 4 IVEKIGMSRTVN--NPSIPVTLLKVVNAKVC---EVSECGCAIVAYAKGKAKNKAIEGQQ 58 Query: 66 RGF--------FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 + + F+++ V+ K+ D D+ P+ S +++ V+ + G Sbjct: 59 KKYSLTAEFNKFATLQVANKE-------AGDLDISPLSSA---------KILKVSFSSKG 102 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KG+ G +KRH F G +HG S H+ HGS G R+ PGRV KMAG G +VTVKN Sbjct: 103 KGYQGVVKRHGFAGGPKSHG-SRFHKRHGSIGNREWPGRVQPGMKMAGHTGNEKVTVKN- 160 Query: 178 EVVSVDDKRGLILVKGCVPG 197 E+VS D + G++++KG V G Sbjct: 161 EIVSFDAENGILVLKGSVAG 180 >gi|268680587|ref|YP_003305018.1| 50S ribosomal protein L3 [Sulfurospirillum deleyianum DSM 6946] gi|268618618|gb|ACZ12983.1| 50S ribosomal protein L3 [Sulfurospirillum deleyianum DSM 6946] Length = 192 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 101/193 (52%), Gaps = 15/193 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ + +PVT+L + +V ++D+N V +G K ++K + Sbjct: 4 IIEKIGMSRTIAVPS--VPVTLLRVLEAKVC---SVDENKRALVSYVSG----KKMNKAI 54 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G N+S F V D VG S + + Q + V+ T G+GF+G +K Sbjct: 55 AGQQKKYNLS---AAFNRFVTLDVTNTEVGD-LSTAPLSEAQRLKVSLNTKGRGFTGVIK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 RHNF G HG S HR+ GS G + PGRV K KKM G G +VTV+N E+VS D + Sbjct: 111 RHNFHGGPGGHG-SRFHRAPGSIGNCEWPGRVQKGKKMPGHYGNTQVTVQN-EIVSFDAE 168 Query: 186 RGLILVKGCVPGA 198 G++ VKG VPGA Sbjct: 169 NGILAVKGSVPGA 181 >gi|315639321|ref|ZP_07894483.1| 50S ribosomal protein L3 [Campylobacter upsaliensis JV21] gi|315480647|gb|EFU71289.1| 50S ribosomal protein L3 [Campylobacter upsaliensis JV21] Length = 192 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 47/100 (47%), Positives = 64/100 (64%), Gaps = 2/100 (2%) Query: 98 FSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRV 157 S +++ V+ + G+G+SG MKRHNFGG A+HG S HR HGS G R+ PGRV Sbjct: 83 LDESPLNEAKILKVSFNSKGRGYSGVMKRHNFGGGPASHG-SRFHRRHGSIGNREWPGRV 141 Query: 158 FKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197 KMAG G +V+VKN E+VS D + ++++KG VPG Sbjct: 142 QPGMKMAGHYGNAKVSVKN-ELVSYDAENKILVLKGAVPG 180 >gi|319955856|ref|YP_004167119.1| LSU ribosomal protein l3p [Nitratifractor salsuginis DSM 16511] gi|319418260|gb|ADV45370.1| LSU ribosomal protein L3P [Nitratifractor salsuginis DSM 16511] Length = 193 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 65/195 (33%), Positives = 99/195 (50%), Gaps = 16/195 (8%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ ++ +PVT+L + +V R ++G V +G K ++K + Sbjct: 4 IVEKIGMSRTIDVP--SVPVTLLKVVETKVCEVR---EDGKALVAYNSG----KKINKAI 54 Query: 66 RGFFSSVNVSPK-KKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G +VS + K V + + S + Q+V + + G+GFSG M Sbjct: 55 EGQQKKYSVSNEFNKFMTLEVAEGTEP----GDLSTAPLAEAQVVKSSFNSKGRGFSGVM 110 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHNF G HG S HR+ GS G + PGRV +KM G G + TVKN EV+S D Sbjct: 111 KRHNFAGGPGAHG-SRFHRAPGSIGMCEWPGRVQPGQKMPGHYGNAKTTVKN-EVISFDA 168 Query: 185 KRGLILVKGCVPGAK 199 + G++++KG VPG K Sbjct: 169 ENGILVLKGAVPGPK 183 >gi|56753667|gb|AAW25036.1| SJCHGC01793 protein [Schistosoma japonicum] Length = 391 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 67/236 (28%), Positives = 108/236 (45%), Gaps = 32/236 (13%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQ---------- 50 R G++A KLG+ ++ G ++ TV + DN + + + Y+++ Sbjct: 94 RCGLIAIKLGVYPLWTKTGEKMDCTVFQVPDNHALRYTPPSEIDKYISLLHPRHYWLNSK 153 Query: 51 ---------------VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG 95 VGA A + N + V PK+K+ F V D L P G Sbjct: 154 RPPSWITQKRWGIQLVGAFSADLLNSLLNGVAYLKEAGVPPKRKISRFLVSPDAALKP-G 212 Query: 96 SVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGS-TGCRQDP 154 + S +F VG +D+T TI +GF G ++R G A HG + HR GS GC Sbjct: 213 TPLSVHHFRVGDYLDITARTINRGFQGVIERWGMKGGPAAHGSTKFHRRMGSAAGCG--- 269 Query: 155 GRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 G + + K+M G MG +++ + +V ++ K GLI V G PG +++ L+ DS+ Sbjct: 270 GPIARGKRMPGVMGNRFRSLRGVMIVRINPKLGLIYVPGATPGP-VHAYCLLHDSW 324 >gi|198423016|ref|XP_002125651.1| PREDICTED: similar to mitochondrial ribosomal protein L3 [Ciona intestinalis] Length = 392 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 10/212 (4%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGY----MAVQVGAGEAK 57 R G V KLG+ ++ +G T++ + +C V+ + K Y AV +G A Sbjct: 136 RCGAVGIKLGVHPIWFKDGTYANCTLIQIQDCHVI--KYFSKEEYNTKTAAVIIGGKNAS 193 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 ++ F V K K F F + ++ L P G+ + +F GQ VD T +IG Sbjct: 194 PFYKNEKYHEFCREAGVPVKAKCFRFLISENAALKP-GTEITAMHFKPGQFVDCTAQSIG 252 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 GF G ++R +F G A R GS G Q G V K KKMAG++GG + L Sbjct: 253 YGFQGVIQRWHFAGGHARKDKKWMRRP-GSIGGSQI-GWVMKGKKMAGQLGGTNEITRGL 310 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +V+ ++ + ++ VKG + G N ++ + DS Sbjct: 311 KVLRINTRYNVLYVKGRIAG-HINQFVKIADS 341 >gi|237753023|ref|ZP_04583503.1| 50s ribosomal protein l3 [Helicobacter winghamensis ATCC BAA-430] gi|229375290|gb|EEO25381.1| 50s ribosomal protein l3 [Helicobacter winghamensis ATCC BAA-430] Length = 192 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 46/83 (55%), Positives = 57/83 (68%), Gaps = 2/83 (2%) Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 T G+GFSG MKR NF G A HG S HR+ GS G R+ PGRV KKMAG G +VTV Sbjct: 100 TKGRGFSGVMKRWNFQGGPAAHG-SRFHRAPGSIGNREWPGRVQPGKKMAGHYGNEKVTV 158 Query: 175 KNLEVVSVDDKRGLILVKGCVPG 197 +N E+VS D + G++++KG VPG Sbjct: 159 QN-EIVSFDKEHGVLVLKGSVPG 180 >gi|39938686|ref|NP_950452.1| ribosomal protein L3 [Onion yellows phytoplasma OY-M] gi|42559576|sp|P60455|RL3_ONYPE RecName: Full=50S ribosomal protein L3 gi|39721795|dbj|BAD04285.1| ribosomal protein L3 [Onion yellows phytoplasma OY-M] Length = 157 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 56/151 (37%), Positives = 82/151 (54%), Gaps = 9/151 (5%) Query: 65 MRGFFSSVNVSPKK--KLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 M G F +PK+ K F + +L L VG++ + F VG LVDVTG + GKGF Sbjct: 1 MLGHFKKATTAPKRFIKEINFSADVNSNLANLAVGALITNDLFQVGDLVDVTGTSKGKGF 60 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G++KRHN +HG R H G K KK+ G MG VT++NL ++ Sbjct: 61 AGSIKRHNQSRGPESHGS----RYHRRPGSMGPIKGKLKGKKLPGHMGHETVTIQNLAIL 116 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 SVD ++ L L+KG VPG K +++++ + K Sbjct: 117 SVDTEKNLFLIKGNVPGPNK-GFVIIKSAVK 146 >gi|237835099|ref|XP_002366847.1| 50S ribosomal protein L3, putative [Toxoplasma gondii ME49] gi|211964511|gb|EEA99706.1| 50S ribosomal protein L3, putative [Toxoplasma gondii ME49] Length = 377 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 93/204 (45%), Gaps = 28/204 (13%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ARK+ MT ++ +G+ PVT+L + +V + G V + V +P Sbjct: 129 LLARKIDMTACFSPDGQAEPVTLLQVLPATIV---QFLEYGKAVVSYDLPRRRRLFVKRP 185 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMT--------- 115 G V + FE +V P+ F +GQ++DV+ + Sbjct: 186 TLGKLQRVGAT----GFETATV---------TVRPPNEFVLGQILDVSSLLGAKRVHVRA 232 Query: 116 --IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 GKGF G + R F THG S HR GS G DPGRV +MAGR T Sbjct: 233 VKKGKGFQGTVSRFGFHRGPMTHG-STHHRGPGSVGAGTDPGRVLPGTRMAGRDKAKVAT 291 Query: 174 VKNLEVVSVDDKRGLILVKGCVPG 197 V+NL V+ + K+ L++V+G VPG Sbjct: 292 VRNLRVLGFNPKQNLLIVRGSVPG 315 >gi|221485858|gb|EEE24128.1| 50S ribosomal protein L3, putative [Toxoplasma gondii GT1] Length = 394 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 93/204 (45%), Gaps = 28/204 (13%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ARK+ MT ++ +G+ PVT+L + +V + G V + V +P Sbjct: 146 LLARKIDMTACFSPDGQAEPVTLLQVLPATIV---QFLEYGKAVVSYDLPRRRRLFVKRP 202 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMT--------- 115 G V + FE +V P+ F +GQ++DV+ + Sbjct: 203 TLGKLQRVGAT----GFETATV---------TVRPPNEFVLGQILDVSSLLGAKRVHVRA 249 Query: 116 --IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 GKGF G + R F THG S HR GS G DPGRV +MAGR T Sbjct: 250 VKKGKGFQGTVSRFGFHRGPMTHG-STHHRGPGSVGAGTDPGRVLPGTRMAGRDKAKVAT 308 Query: 174 VKNLEVVSVDDKRGLILVKGCVPG 197 V+NL V+ + K+ L++V+G VPG Sbjct: 309 VRNLRVLGFNPKQNLLIVRGSVPG 332 >gi|34558027|ref|NP_907842.1| 50S ribosomal protein L3 [Wolinella succinogenes DSM 1740] gi|42559590|sp|Q7M8D4|RL3_WOLSU RecName: Full=50S ribosomal protein L3 gi|34483745|emb|CAE10742.1| 50S RIBOSOMAL PROTEIN L3 [Wolinella succinogenes] Length = 192 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 100/201 (49%), Gaps = 33/201 (16%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLH---------LDNCQVVVHRTLDKNGYMAVQVGAGEA 56 + K+GM+ ++ PVT+L L N + +V K+ A++ G+ Sbjct: 4 LVEKIGMSRTISVPS--TPVTLLKVKDAKVCEVLGNGKALVAYAQGKDANKAIE---GQQ 58 Query: 57 KVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116 K N+SK F+++ V+ + D D+ P+ V V+ T Sbjct: 59 KKYNLSKEFN-RFATLEVANGE-------AGDQDVAPLAQAVR---------VKVSLQTK 101 Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 G+GF+G MKR NF G A HG R+ GS G R+ PGRV KKMAG+ G +VTV+N Sbjct: 102 GRGFTGVMKRWNFAGGPAAHGHRFKRRT-GSIGNREWPGRVQPGKKMAGQYGNEKVTVQN 160 Query: 177 LEVVSVDDKRGLILVKGCVPG 197 E+VS D + ++++KG +PG Sbjct: 161 -EIVSFDAENKILVLKGSIPG 180 >gi|221503775|gb|EEE29459.1| 50S ribosomal protein L3, putative [Toxoplasma gondii VEG] Length = 383 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 93/204 (45%), Gaps = 28/204 (13%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ARK+ MT ++ +G+ PVT+L + +V + G V + V +P Sbjct: 135 LLARKIDMTACFSPDGQAEPVTLLQVLPATIV---QFLEYGKAVVSYDLPRRRRLFVKRP 191 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMT--------- 115 G V + FE +V P+ F +GQ++DV+ + Sbjct: 192 TLGKLQRVGAT----GFETATV---------TVRPPNEFVLGQILDVSSLLGAKRVHVRA 238 Query: 116 --IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 GKGF G + R F THG S HR GS G DPGRV +MAGR T Sbjct: 239 VKKGKGFQGTVSRFGFHRGPMTHG-STHHRGPGSVGAGTDPGRVLPGTRMAGRDKAKVAT 297 Query: 174 VKNLEVVSVDDKRGLILVKGCVPG 197 V+NL V+ + K+ L++V+G VPG Sbjct: 298 VRNLRVLGFNPKQNLLIVRGSVPG 321 >gi|152993893|ref|YP_001359614.1| 50S ribosomal protein L3 [Sulfurovum sp. NBC37-1] gi|151425754|dbj|BAF73257.1| 50S ribosomal protein L3 [Sulfurovum sp. NBC37-1] Length = 193 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 64/192 (33%), Positives = 102/192 (53%), Gaps = 14/192 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ ++ +PVT+L + + +V + ++G V + K ++K + Sbjct: 4 IVEKIGMSRTVDVP--SVPVTLLKVVDTKVC---EVKEDGKALVAYNSS----KKLNKSI 54 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G + VS K+ +F + + G + +P+ V + T G+GFSG MK Sbjct: 55 EGQQTKFGVS--KEFNKFMTIEVAEGTEAGDL-NPAALAEAAAVKTSLNTKGRGFSGGMK 111 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 RHNFGG +HG R GS G + PGRV K KKM G+ G +VTVKN +VVS D + Sbjct: 112 RHNFGGGPGSHGHRFGRRI-GSIGNAEWPGRVQKGKKMPGQYGNTKVTVKN-DVVSFDAE 169 Query: 186 RGLILVKGCVPG 197 G++++KG +PG Sbjct: 170 NGILVLKGSIPG 181 >gi|15645932|ref|NP_208111.1| 50S ribosomal protein L3 [Helicobacter pylori 26695] gi|108563689|ref|YP_628005.1| 50S ribosomal protein L3 [Helicobacter pylori HPAG1] gi|208435216|ref|YP_002266882.1| ribosomal protein L3 [Helicobacter pylori G27] gi|210135476|ref|YP_002301915.1| 50S ribosomal protein L3 [Helicobacter pylori P12] gi|217032072|ref|ZP_03437572.1| hypothetical protein HPB128_16g32 [Helicobacter pylori B128] gi|298735656|ref|YP_003728181.1| 50S ribosomal protein L3 [Helicobacter pylori B8] gi|2500226|sp|P56031|RL3_HELPY RecName: Full=50S ribosomal protein L3 gi|2314481|gb|AAD08358.1| ribosomal protein L3 (rpl3) [Helicobacter pylori 26695] gi|107837462|gb|ABF85331.1| ribosomal protein L3 [Helicobacter pylori HPAG1] gi|208433145|gb|ACI28016.1| ribosomal protein L3 [Helicobacter pylori G27] gi|210133444|gb|ACJ08435.1| 50S ribosomal protein L3 [Helicobacter pylori P12] gi|216946220|gb|EEC24828.1| hypothetical protein HPB128_16g32 [Helicobacter pylori B128] gi|298354845|emb|CBI65717.1| large subunit ribosomal protein L3 [Helicobacter pylori B8] gi|317010002|gb|ADU80582.1| 50S ribosomal protein L3 [Helicobacter pylori India7] gi|317178058|dbj|BAJ55847.1| 50S ribosomal protein L3 [Helicobacter pylori F16] Length = 191 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 100/200 (50%), Gaps = 31/200 (15%) Query: 6 VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57 + +K+GM+ I+ PVT+L L+N + +V + K A++ G+ K Sbjct: 4 LVQKIGMS--RTIDANSTPVTLLKVLQAKVCQLENGKALVAYAMHKKHNKAIE---GQQK 58 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 +SK F+++ S +K+L + + + L V + F T G Sbjct: 59 KYQLSKEF-NHFATLKASQQKELGDLDLSALETLKRVKASFK---------------TKG 102 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 +GF+G MKR NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N Sbjct: 103 RGFAGVMKRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN- 160 Query: 178 EVVSVDDKRGLILVKGCVPG 197 EV+S D + ++++KG V G Sbjct: 161 EVLSFDKESMVLVLKGSVAG 180 >gi|207091947|ref|ZP_03239734.1| 50S ribosomal protein L3 [Helicobacter pylori HPKX_438_AG0C1] Length = 191 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 100/200 (50%), Gaps = 31/200 (15%) Query: 6 VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57 + +K+GM+ I+ PVT+L L+N + +V + K A++ G+ K Sbjct: 4 LVQKIGMS--RTIDANSTPVTLLKVLQAKVCQLENGKALVAYAMHKKHNKAIE---GQQK 58 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 +SK F+++ S +K+L + + + L V + F T G Sbjct: 59 KYQLSKEF-NHFATLKASQQKELGDLDLSALETLKRVKASFK---------------TKG 102 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 +GF+G MKR NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N Sbjct: 103 RGFAGVMKRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN- 160 Query: 178 EVVSVDDKRGLILVKGCVPG 197 EV+S D + ++++KG V G Sbjct: 161 EVLSFDKESMVLVLKGSVAG 180 >gi|254779861|ref|YP_003057967.1| 50S ribosomal protein L3 [Helicobacter pylori B38] gi|254001773|emb|CAX30004.1| 50S ribosomal subunit protein L3 [Helicobacter pylori B38] Length = 191 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 100/200 (50%), Gaps = 31/200 (15%) Query: 6 VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57 + +K+GM+ I+ PVT+L L+N + +V + K A++ G+ K Sbjct: 4 LVQKIGMS--RTIDANSTPVTLLKVLQAKVCQLENGKALVAYAMHKKHNKAIE---GQQK 58 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 +SK F+++ S +K+L + + + L V + F T G Sbjct: 59 KYQLSKEF-NHFATLKASQQKELGDLDLSTLETLKRVKASFK---------------TKG 102 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 +GF+G MKR NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N Sbjct: 103 RGFAGVMKRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN- 160 Query: 178 EVVSVDDKRGLILVKGCVPG 197 EV+S D + ++++KG V G Sbjct: 161 EVLSFDKESMVLVLKGSVAG 180 >gi|109946759|ref|YP_663987.1| 50S ribosomal protein L3 [Helicobacter acinonychis str. Sheeba] gi|109713980|emb|CAJ98988.1| 50S ribosomal protein L3 [Helicobacter acinonychis str. Sheeba] gi|317011519|gb|ADU85266.1| 50S ribosomal protein L3 [Helicobacter pylori SouthAfrica7] Length = 191 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 100/200 (50%), Gaps = 31/200 (15%) Query: 6 VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57 + +K+GM+ I+ PVT+L L+N + +V + K A++ G+ K Sbjct: 4 LVQKIGMS--RTIDANSTPVTLLKVLQAKVCQLENGKALVAYAMHKKHNKAIE---GQQK 58 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 +SK F+++ S +K+L + + + L V + F T G Sbjct: 59 KYQLSKEF-NHFATLKASQQKELGDLDLSALETLKRVKASFK---------------TKG 102 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 +GF+G MKR NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N Sbjct: 103 RGFAGVMKRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN- 160 Query: 178 EVVSVDDKRGLILVKGCVPG 197 EV+S D + ++++KG V G Sbjct: 161 EVLSFDKESMVLVLKGSVAG 180 >gi|255017007|ref|ZP_05289133.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL F2-515] Length = 122 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 1/122 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGRKVGMTQVFTENGELIPVTVIEAAQNVVLQKKTVETDGYEAVQIGFEDKRAIL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EFR + D +G+ F G ++D TG++ GKGF Sbjct: 61 SNKPEQGHVAKANTTPKRFIREFR-DVNLDEYEIGAEVKVDVFAEGDIIDATGVSKGKGF 119 Query: 121 SG 122 G Sbjct: 120 QG 121 >gi|291277268|ref|YP_003517040.1| 50S ribosomal protein L3 [Helicobacter mustelae 12198] gi|290964462|emb|CBG40312.1| 50S ribosomal protein L3 [Helicobacter mustelae 12198] Length = 192 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 68/196 (34%), Positives = 97/196 (49%), Gaps = 23/196 (11%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ I+ + I VT+L + + +V + +N + G+A K ++ Sbjct: 4 LVEKIGMSRT--IDTKSIAVTLLRVIDAKVC---EIYENKKALIAYAKGKASNKAIAGQQ 58 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV----FSPSYFTVGQLVDVTGMTIGKGFS 121 + + N+S + F L VG+ S Q + VT T G+GFS Sbjct: 59 KKY----NLSKEFNRFA--------TLQVGNAEVGDLDKSALENAQRLKVTFKTKGRGFS 106 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 GAMKR NF G A HG S HR GS G R+ PGRV KKMAG G VT +N EVVS Sbjct: 107 GAMKRWNFQGGPAAHG-SRFHRRLGSIGNREWPGRVQPGKKMAGHYGNETVTAQN-EVVS 164 Query: 182 VDDKRGLILVKGCVPG 197 D + ++++KG V G Sbjct: 165 FDKESNILVLKGSVAG 180 >gi|94993442|ref|YP_601540.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10750] gi|94546950|gb|ABF36996.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10750] Length = 78 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 46/79 (58%), Positives = 57/79 (72%), Gaps = 3/79 (3%) Query: 135 THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGC 194 HG S HR GS G P RVFKNK++AGRMGGNRVTV+NLE+V V ++ +ILVKG Sbjct: 2 AHG-SRYHRRPGSMGP-VAPNRVFKNKRLAGRMGGNRVTVQNLEIVQVIPEKNVILVKGN 59 Query: 195 VPGAKKNSWILVRDSFKSA 213 VPGAKK S I ++ + K+A Sbjct: 60 VPGAKK-SLITIKSAVKAA 77 >gi|15612304|ref|NP_223957.1| 50S ribosomal protein L3 [Helicobacter pylori J99] gi|7674309|sp|Q9ZJR4|RL3_HELPJ RecName: Full=50S ribosomal protein L3 gi|4155816|gb|AAD06790.1| 50S RIBOSOMAL PROTEIN L3 [Helicobacter pylori J99] Length = 191 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 100/200 (50%), Gaps = 31/200 (15%) Query: 6 VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57 + +K+GM+ I+ PVT+L L+N + +V + K A++ G+ K Sbjct: 4 LVQKIGMS--RTIDANSTPVTLLKVLQAKVCQLENGKALVAYAMHKKYNKAIE---GQQK 58 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 +SK F+++ S +K+L + + + L V + F T G Sbjct: 59 KYQLSKEF-NHFATLKASQQKELGDLDLSALETLKRVKASFK---------------TKG 102 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 +GF+G MKR NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N Sbjct: 103 RGFAGVMKRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN- 160 Query: 178 EVVSVDDKRGLILVKGCVPG 197 EV+S D + ++++KG V G Sbjct: 161 EVLSFDKESMVLVLKGSVAG 180 >gi|242309319|ref|ZP_04808474.1| 50s ribosomal protein L3 [Helicobacter pullorum MIT 98-5489] gi|239523890|gb|EEQ63756.1| 50s ribosomal protein L3 [Helicobacter pullorum MIT 98-5489] Length = 192 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 44/83 (53%), Positives = 56/83 (67%), Gaps = 2/83 (2%) Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 T G+GFSG MKR NF G HG S HR+ GS G R+ PGRV KKMAG G +VTV Sbjct: 100 TKGRGFSGVMKRWNFQGGPGAHG-SRFHRAPGSIGNREWPGRVQPGKKMAGHYGNEKVTV 158 Query: 175 KNLEVVSVDDKRGLILVKGCVPG 197 +N E++S D + G++++KG VPG Sbjct: 159 QN-EIISFDKEHGVLVLKGSVPG 180 >gi|170596208|ref|XP_001902682.1| Mitochondrial 39S ribosomal protein L3 [Brugia malayi] gi|158589507|gb|EDP28470.1| Mitochondrial 39S ribosomal protein L3, putative [Brugia malayi] Length = 424 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 69/241 (28%), Positives = 107/241 (44%), Gaps = 38/241 (15%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGY--------------- 46 R G++ARK+GM + ++G R T+L V+ +D Y Sbjct: 111 RIGMLARKIGMFPQWAVDGTRFLCTLLEFPKNLVI--SAIDPETYYRISMVGRRKAYGRY 168 Query: 47 ---MAVQVGAGEAKVKNVSKPMRGFFSSVNVS-------------P-KKKLFEFRVQKDD 89 V VGA + + R F V+ P KK + F V +D Sbjct: 169 GARWRVTVGAVDGDPTKFTARYRATFERHGVNFVAVFIFLILSGFPVKKHIASFLVTEDA 228 Query: 90 DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTG 149 + P G+ +F VGQ + +TG TI GF G M R F G+ A G + SHR G+ G Sbjct: 229 VVQP-GTELHVCHFKVGQYITITGHTIDWGFQGGMHRWGFKGMPA-RGTTKSHRRIGAIG 286 Query: 150 CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 + D RV K+M G MG ++ LEV+ ++ ++ ++ V G VPG + +L++D Sbjct: 287 SKGD-ARVRPGKRMPGHMGYEWRSIPGLEVLRINPEKQVMYVNGSVPG-ETGEILLIKDC 344 Query: 210 F 210 + Sbjct: 345 Y 345 >gi|188528107|ref|YP_001910794.1| 50S ribosomal protein L3 [Helicobacter pylori Shi470] gi|308183429|ref|YP_003927556.1| 50S ribosomal protein L3 [Helicobacter pylori PeCan4] gi|188144347|gb|ACD48764.1| 50S ribosomal protein L3 [Helicobacter pylori Shi470] gi|308065614|gb|ADO07506.1| 50S ribosomal protein L3 [Helicobacter pylori PeCan4] Length = 191 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 31/200 (15%) Query: 6 VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57 + +K+GM+ I+ PVT+L L+N + +V + K A++ G+ K Sbjct: 4 LVQKIGMS--RTIDANSTPVTLLKVLQAKVCQLENGKALVAYAMHKKHNKAIE---GQQK 58 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 +SK F+++ S +K+L + + + L V + F T G Sbjct: 59 KYQLSKEF-NHFATLKASQQKELGDLDLSALETLKRVKASFK---------------TKG 102 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 +GF+G MKR NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N Sbjct: 103 RGFAGVMKRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN- 160 Query: 178 EVVSVDDKRGLILVKGCVPG 197 EV+S D + ++ +KG V G Sbjct: 161 EVLSFDKESMVLALKGSVAG 180 >gi|71027797|ref|XP_763542.1| 50S ribosomal protein L3 [Theileria parva strain Muguga] gi|68350495|gb|EAN31259.1| 50S ribosomal protein L3, putative [Theileria parva] Length = 161 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 13/132 (9%) Query: 88 DDDLLPVGSVFSPSYFTVGQLVDV-----------TGMTIGKGFSGAMKRHNFGGLRATH 136 + + PV + P + +GQLVDV TG+T GKGF G +KRH F +H Sbjct: 22 EAETFPV-KLQPPQDYVLGQLVDVSSFVGCTHAKVTGITKGKGFQGTIKRHGFKRGPMSH 80 Query: 137 GVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP 196 G S HR GS G PG V K+MAGRMGG R T + L+++ ++ + L+ +KG V Sbjct: 81 G-SKHHRGPGSIGASTTPGCVKPGKRMAGRMGGKRCTFRKLKILGLNPETSLLYLKGLVA 139 Query: 197 GAKKNSWILVRD 208 G K + + D Sbjct: 140 GPKGSYVTVTSD 151 >gi|317014710|gb|ADU82146.1| 50S ribosomal protein L3 [Helicobacter pylori Gambia94/24] Length = 191 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 31/200 (15%) Query: 6 VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57 + +K+GM+ I+ PVT+L L+N + +V + K A++ G+ K Sbjct: 4 LVQKIGMS--RTIDANSTPVTLLKVLQAKVCQLENGKALVAYAMHKKHNKAIE---GQQK 58 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 +SK F+++ S +++L + + + L V + F T G Sbjct: 59 KYQLSKEF-NHFATLKASQQQELGDLDLSALETLKRVKASFK---------------TKG 102 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 +GF+G MKR NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N Sbjct: 103 RGFAGVMKRWNFQGGPAAHG-SRFHRHPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN- 160 Query: 178 EVVSVDDKRGLILVKGCVPG 197 EV+S D + ++++KG V G Sbjct: 161 EVLSFDKESMVLVLKGSVAG 180 >gi|217033636|ref|ZP_03439064.1| hypothetical protein HP9810_899g72 [Helicobacter pylori 98-10] gi|216943982|gb|EEC23416.1| hypothetical protein HP9810_899g72 [Helicobacter pylori 98-10] gi|261840034|gb|ACX99799.1| 50S ribosomal protein L3 [Helicobacter pylori 52] gi|307637990|gb|ADN80440.1| LSU ribosomal protein L3p:L3e [Helicobacter pylori 908] gi|308062604|gb|ADO04492.1| 50S ribosomal protein L3 [Helicobacter pylori Cuz20] gi|315587208|gb|ADU41589.1| 50S ribosomal protein L3 [Helicobacter pylori 35A] gi|317013106|gb|ADU83714.1| 50S ribosomal protein L3 [Helicobacter pylori Lithuania75] gi|317178390|dbj|BAJ56178.1| 50S ribosomal protein L3 [Helicobacter pylori F30] gi|317181041|dbj|BAJ58827.1| 50S ribosomal protein L3 [Helicobacter pylori F32] gi|317182565|dbj|BAJ60349.1| 50S ribosomal protein L3 [Helicobacter pylori F57] gi|325996595|gb|ADZ52000.1| 50S ribosomal protein L3 [Helicobacter pylori 2018] gi|325998185|gb|ADZ50393.1| 50S ribosomal protein L3 [Helicobacter pylori 2017] Length = 191 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 31/200 (15%) Query: 6 VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57 + +K+GM+ I+ PVT+L L+N + +V + K A++ G+ K Sbjct: 4 LVQKIGMS--RTIDANSTPVTLLKVLQAKVCQLENGKALVAYAMHKKHNKAIE---GQQK 58 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 +SK F+++ S +++L + + + L V + F T G Sbjct: 59 KYQLSKEF-NHFATLKASQQQELGDLDLSALETLKRVKASFK---------------TKG 102 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 +GF+G MKR NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N Sbjct: 103 RGFAGVMKRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN- 160 Query: 178 EVVSVDDKRGLILVKGCVPG 197 EV+S D + ++++KG V G Sbjct: 161 EVLSFDKESMVLVLKGSVAG 180 >gi|115749008|ref|XP_001195229.1| PREDICTED: similar to mitochondrial ribosomal protein L3 [Strongylocentrotus purpuratus] gi|115922520|ref|XP_001179143.1| PREDICTED: similar to mitochondrial ribosomal protein L3 [Strongylocentrotus purpuratus] Length = 343 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 4/145 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYM---AVQVGAGEAKV 58 R+GV+A KLGM ++ EG+R+P T+L + C V+ NG V V A A Sbjct: 114 RAGVIAIKLGMQPLWTKEGKRVPTTLLQVLECNVIDFHPQGLNGSDRPGTVLVAAKNAPP 173 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 + F SV + K+ + F V + L P G+ ++F G VD+ TI K Sbjct: 174 YYKDEEYADLFKSVCLPVKEHITSFNVTDNAALQP-GTPLYAAHFRPGMYVDIAAKTIDK 232 Query: 119 GFSGAMKRHNFGGLRATHGVSISHR 143 GF G MKR G A+HG + +HR Sbjct: 233 GFQGVMKRWGMKGQPASHGATKTHR 257 >gi|308185071|ref|YP_003929204.1| 50S ribosomal protein L3 [Helicobacter pylori SJM180] gi|308060991|gb|ADO02887.1| 50S ribosomal protein L3 [Helicobacter pylori SJM180] Length = 191 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 31/200 (15%) Query: 6 VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57 + +K+GM+ I+ PVT+L L+N + +V + K A++ G+ K Sbjct: 4 LVQKIGMS--RTIDANSTPVTLLKVLQAKVCQLENGKALVAYAMHKKYNKAIE---GQQK 58 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 +SK F+++ S +++L + + + L V + F T G Sbjct: 59 KYQLSKEF-NHFATLKASQQQELGDLDLSALETLKRVKASFK---------------TKG 102 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 +GF+G MKR NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N Sbjct: 103 RGFAGVMKRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN- 160 Query: 178 EVVSVDDKRGLILVKGCVPG 197 EV+S D + ++++KG V G Sbjct: 161 EVLSFDKESMVLVLKGSVAG 180 >gi|261838638|gb|ACX98404.1| ribosomal protein L3 [Helicobacter pylori 51] Length = 191 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 31/200 (15%) Query: 6 VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57 + +K+GM+ I+ PVT+L L+N + +V + K A++ G+ K Sbjct: 4 LVQKIGMS--RTIDANSTPVTLLKVLQAKVCQLENGKALVAYAMHKKYNKAIE---GQQK 58 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 +SK F+++ S +++L + + + L V + F T G Sbjct: 59 KYQLSKEF-NHFATLKASQQQELGDLDLSTLETLKRVKASFK---------------TKG 102 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 +GF+G MKR NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N Sbjct: 103 RGFAGVMKRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN- 160 Query: 178 EVVSVDDKRGLILVKGCVPG 197 EV+S D + ++++KG V G Sbjct: 161 EVLSFDKESMVLVLKGSVAG 180 >gi|297380500|gb|ADI35387.1| 50S ribosomal protein L3 [Helicobacter pylori v225d] Length = 191 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 65/200 (32%), Positives = 99/200 (49%), Gaps = 31/200 (15%) Query: 6 VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57 + +K+GM+ I+ PVT+L L+N + +V + K A++ G+ K Sbjct: 4 LVQKIGMS--RTIDANSTPVTLLKVLQAKVCQLENGKALVAYAMHKKHNKAIE---GQQK 58 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 +SK F+++ S +++L + + + L V + F T G Sbjct: 59 KYQLSKEF-NHFATLKASQQQELGDLDLSALETLKKVKASFK---------------TKG 102 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 +GF+G MKR NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N Sbjct: 103 RGFAGVMKRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN- 160 Query: 178 EVVSVDDKRGLILVKGCVPG 197 EV+S D + ++ +KG V G Sbjct: 161 EVLSFDKESMVLALKGSVAG 180 >gi|308064096|gb|ADO05983.1| 50S ribosomal protein L3 [Helicobacter pylori Sat464] Length = 191 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 65/200 (32%), Positives = 99/200 (49%), Gaps = 31/200 (15%) Query: 6 VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57 + +K+GM+ I+ PVT+L L+N + +V + K A++ G+ K Sbjct: 4 LVQKIGMS--RTIDANSTPVTLLKVLQAKVCQLENGKALVAYAMHKKHNKAIE---GQQK 58 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 +SK F+++ S +++L + + + L V + F T G Sbjct: 59 KYQLSKEF-NHFATLKASQQQELGDLDLSALETLKRVKASFK---------------TKG 102 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 +GF+G MKR NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N Sbjct: 103 RGFAGVMKRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN- 160 Query: 178 EVVSVDDKRGLILVKGCVPG 197 EV+S D + ++ +KG V G Sbjct: 161 EVLSFDKESMVLALKGSVAG 180 >gi|313681319|ref|YP_004059057.1| LSU ribosomal protein l3p [Sulfuricurvum kujiense DSM 16994] gi|313154179|gb|ADR32857.1| LSU ribosomal protein L3P [Sulfuricurvum kujiense DSM 16994] Length = 191 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 54/145 (37%), Positives = 79/145 (54%), Gaps = 16/145 (11%) Query: 59 KNVSKPMRGFFSSVNVSPK-KKLFEFRVQK----DDDLLPVGSVFSPSYFTVGQLVDVTG 113 K+ +KP+ G N+S + K V D D+ P+ + + V + Sbjct: 47 KSTNKPVEGQQKKYNLSAEFNKFATLEVANTEAGDLDMAPLANATT---------VKSSF 97 Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 T G+GF+G MKR NF G HG HR+ GS G R+ PG+V K +KM+G+ G +VT Sbjct: 98 NTKGRGFTGVMKRWNFAGGPGAHGHRF-HRTGGSIGNREWPGKVQKGRKMSGQYGDEQVT 156 Query: 174 VKNLEVVSVDDKRGLILVKGCVPGA 198 VKN EV+S D + G+++V G +PGA Sbjct: 157 VKN-EVMSYDAENGVLVVVGSIPGA 180 >gi|85000981|ref|XP_955209.1| 50S ribosomal protein L3 [Theileria annulata strain Ankara] gi|65303355|emb|CAI75733.1| 50S ribosomal protein L3, putative [Theileria annulata] Length = 328 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 48/111 (43%), Positives = 61/111 (54%), Gaps = 12/111 (10%) Query: 100 PSYFTVGQLVDV-----------TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148 P + +GQLVDV TG+T GKGF G +KRH F +HG S HR GS Sbjct: 200 PQDYVLGQLVDVSSFVGCTHAKVTGITKGKGFQGVIKRHGFKRGPMSHG-SKHHRRPGSI 258 Query: 149 GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAK 199 G PG V KKM GRMGG R T + L+++ ++ + L+ VKG V G K Sbjct: 259 GASTTPGCVKPGKKMPGRMGGKRCTFRKLKILGLNPETSLLYVKGHVAGPK 309 >gi|237751236|ref|ZP_04581716.1| 50S ribosomal protein L3 [Helicobacter bilis ATCC 43879] gi|229372602|gb|EEO22993.1| 50S ribosomal protein L3 [Helicobacter bilis ATCC 43879] Length = 197 Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 70/192 (36%), Positives = 101/192 (52%), Gaps = 15/192 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + +K+GM+ + I VT+L + N +V L++NG V G K +K + Sbjct: 4 IVQKVGMSRI--IATPSQAVTLLKVLNAKVC---KLEENGKALVAYSKG----KTCNKSI 54 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G N+S K+ F K + VG + S + G++V T G+GFSGAMK Sbjct: 55 EGNQKKYNLS--KEFNRFATLKVANT-EVGDL-DMSSLSDGKVVKAGFKTKGRGFSGAMK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF G A HG S HR GS G R+ PGRV KKMAG G V+V++ E++S D + Sbjct: 111 RWNFQGGPAAHG-SRFHRRLGSIGNREWPGRVQPGKKMAGHYGDEIVSVRS-EIISFDTQ 168 Query: 186 RGLILVKGCVPG 197 G++++KG V G Sbjct: 169 SGILVLKGSVAG 180 >gi|224417885|ref|ZP_03655891.1| 50S ribosomal protein L3 [Helicobacter canadensis MIT 98-5491] gi|253827224|ref|ZP_04870109.1| 50S ribosomal protein L3 [Helicobacter canadensis MIT 98-5491] gi|313141427|ref|ZP_07803620.1| 50S ribosomal protein L3 [Helicobacter canadensis MIT 98-5491] gi|253510630|gb|EES89289.1| 50S ribosomal protein L3 [Helicobacter canadensis MIT 98-5491] gi|313130458|gb|EFR48075.1| 50S ribosomal protein L3 [Helicobacter canadensis MIT 98-5491] Length = 192 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/83 (51%), Positives = 55/83 (66%), Gaps = 2/83 (2%) Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 T G+GFSG MKR NF G HG S HR+ GS G R+ PGRV KKMAG G +VTV Sbjct: 100 TKGRGFSGVMKRWNFQGGPGAHG-SRFHRAPGSIGNREWPGRVQPGKKMAGHYGNEKVTV 158 Query: 175 KNLEVVSVDDKRGLILVKGCVPG 197 +N E++S D + ++++KG VPG Sbjct: 159 QN-EIISFDKENNVLVLKGSVPG 180 >gi|322378779|ref|ZP_08053208.1| 50S ribosomal protein L3 [Helicobacter suis HS1] gi|322380628|ref|ZP_08054780.1| 50S ribosomal protein L3 [Helicobacter suis HS5] gi|321146950|gb|EFX41698.1| 50S ribosomal protein L3 [Helicobacter suis HS5] gi|321148809|gb|EFX43280.1| 50S ribosomal protein L3 [Helicobacter suis HS1] Length = 194 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 67/202 (33%), Positives = 97/202 (48%), Gaps = 36/202 (17%) Query: 6 VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57 + +K+GM+ + + +PVT+L + Q++V L K A+ AG+ K Sbjct: 4 LVQKIGMSRI--VGASSVPVTLLKVLDSKVCEIKEGQLLVAYALHKKHNKAI---AGQQK 58 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMT 115 +S+ F + + V+ DL P+ V Q + T T Sbjct: 59 KYQLSQEFNHFAT----------LKGHVEAVGDLSIEPLEGV---------QYIKATFYT 99 Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175 G+GFSGAMKR NF G A HG S HR GS G R+ PGRV K KKMAG G +VT Sbjct: 100 KGRGFSGAMKRWNFQGGPAAHG-SRFHRRLGSIGNREWPGRVQKGKKMAGHYGNEKVTCH 158 Query: 176 NLEVVSVDDKRGLILVKGCVPG 197 N +V+S D + ++++KG G Sbjct: 159 N-QVLSFDKENKILVLKGSTAG 179 >gi|156083276|ref|XP_001609122.1| ribosomal protein L3 domain containing protein [Babesia bovis T2Bo] gi|154796372|gb|EDO05554.1| ribosomal protein L3 domain containing protein [Babesia bovis] Length = 323 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 2/115 (1%) Query: 84 RVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHR 143 ++Q D + +G + S F V VTG+T GKGF+G +KRH F +HG S HR Sbjct: 190 KLQPPQDYV-LGQILDVSAFAGCTHVKVTGITKGKGFAGVIKRHGFARGPMSHG-SKHHR 247 Query: 144 SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGA 198 GS G PG V K+M GRMG R T + L V+ ++ + L+ VK V GA Sbjct: 248 KPGSIGASTTPGCVKPGKRMPGRMGNKRCTFRKLRVLGINPETSLMYVKALVAGA 302 >gi|161616466|ref|YP_001590431.1| hypothetical protein SPAB_04281 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161365830|gb|ABX69598.1| hypothetical protein SPAB_04281 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 72 Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 38/59 (64%), Positives = 46/59 (77%) Query: 140 ISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGA 198 +SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV VD +R L+LVKG VPGA Sbjct: 1 MSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAERNLLLVKGGVPGA 59 >gi|152989972|ref|YP_001355694.1| 50S ribosomal protein L3 [Nitratiruptor sp. SB155-2] gi|151421833|dbj|BAF69337.1| 50S ribosomal protein L3 [Nitratiruptor sp. SB155-2] Length = 192 Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 25/197 (12%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ ++ +PVT+L + +V L + G V G+ + +K + Sbjct: 4 IVEKIGMSRTISVPS--VPVTLLKVKEAKVC---ELLEGGKAIVAYSQGKKR----NKAI 54 Query: 66 RGFFSSVNVSPK-KKLFEFRVQK----DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 G +SP+ + + +V D D+ P+ + + + + G+GF Sbjct: 55 EGQQKKYGLSPEFNRFIKLKVTNTEAGDLDVTPLSEA---------KRIKTSFNSKGRGF 105 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG +KR NFGG +HG S HR+ GS G + PGR+ +KM G+ G +VTV+N EVV Sbjct: 106 SGVVKRWNFGGGPDSHG-SRFHRAPGSVGMCEWPGRIMPGQKMPGQYGNKKVTVQN-EVV 163 Query: 181 SVDDKRGLILVKGCVPG 197 S D + +++VKG +PG Sbjct: 164 SFDPENMILVVKGSIPG 180 >gi|307720136|ref|YP_003891276.1| 50S ribosomal protein L3P [Sulfurimonas autotrophica DSM 16294] gi|306978229|gb|ADN08264.1| LSU ribosomal protein L3P [Sulfurimonas autotrophica DSM 16294] Length = 191 Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 50/111 (45%), Positives = 62/111 (55%), Gaps = 11/111 (9%) Query: 88 DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGS 147 D DL P+ + V T T G+GFSGAMKR NFGG A+HG R+ GS Sbjct: 81 DLDLAPLADASA---------VKTTFNTKGRGFSGAMKRWNFGGGPASHGHRFGRRT-GS 130 Query: 148 TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGA 198 G + PGRV K KKM G+ G + +VKN E+VS D + +I V G V GA Sbjct: 131 IGNAEWPGRVMKGKKMPGQYGNTQNSVKN-EIVSFDAENKIIAVLGSVSGA 180 >gi|118474609|ref|YP_891244.1| 50S ribosomal protein L3 [Campylobacter fetus subsp. fetus 82-40] gi|118413835|gb|ABK82255.1| ribosomal protein L3 [Campylobacter fetus subsp. fetus 82-40] Length = 192 Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 44/91 (48%), Positives = 58/91 (63%), Gaps = 2/91 (2%) Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166 +++ V+ T G+GF G +KRH F G A+HG S HR GS G + PGRV +KMAG Sbjct: 92 KVLKVSFNTKGRGFQGVIKRHGFSGGPASHG-SRFHRRPGSIGNCEWPGRVQPGRKMAGH 150 Query: 167 MGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197 G + TVKN EVVS D G++++KG VPG Sbjct: 151 YGNEKTTVKN-EVVSFDSANGILVLKGSVPG 180 >gi|86152355|ref|ZP_01070565.1| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 260.94] gi|85840652|gb|EAQ57904.1| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 260.94] Length = 170 Score = 74.7 bits (182), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 43/77 (55%), Positives = 52/77 (67%), Gaps = 2/77 (2%) Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166 +++ V+ T G+G+SG MKRHNF G A+HG S HR HGS G R+ PGRV KMAG Sbjct: 91 KILKVSFNTKGRGYSGVMKRHNFAGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGH 149 Query: 167 MGGNRVTVKNLEVVSVD 183 G +VTVKN EVVS D Sbjct: 150 YGNTKVTVKN-EVVSYD 165 >gi|42559687|sp|Q9AIN8|RL3_CARRU RecName: Full=50S ribosomal protein L3 gi|13310845|gb|AAK18637.1|AF250389_3 ribosomal protein L3 [Candidatus Carsonella ruddii] Length = 136 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/125 (40%), Positives = 69/125 (55%), Gaps = 13/125 (10%) Query: 77 KKKLFEFRVQKDDDLLPVGSVFSPSY--FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRA 134 KKKL+ F V K S F+ Y F + +++ + + GKGF G +KR NF Sbjct: 14 KKKLYIFNVIKF-------SKFNKFYLNFIINKILLIC-YSKGKGFQGVVKRWNFKTKDK 65 Query: 135 THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGC 194 +HG S+S+R+ GSTG QDPGRVFK KKM GRMG + + L V K+ +K Sbjct: 66 SHGNSLSYRTLGSTGQCQDPGRVFKKKKMPGRMGNKKFS---LFVNIFFRKKNYFFLKKI 122 Query: 195 VPGAK 199 +PG K Sbjct: 123 LPGVK 127 >gi|157737003|ref|YP_001489686.1| 50S ribosomal protein L3 [Arcobacter butzleri RM4018] gi|315636195|ref|ZP_07891449.1| 50S ribosomal protein L3 [Arcobacter butzleri JV22] gi|157698857|gb|ABV67017.1| 50S ribosomal protein L3 [Arcobacter butzleri RM4018] gi|315479556|gb|EFU70235.1| 50S ribosomal protein L3 [Arcobacter butzleri JV22] Length = 191 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 44/92 (47%), Positives = 61/92 (66%), Gaps = 2/92 (2%) Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166 ++V T T G+GFSGA+KR NF G RA+HG + R+ GS G + PGRV KKM G+ Sbjct: 91 KVVKSTFKTKGRGFSGAVKRWNFAGGRASHGHRMGKRT-GSIGNCEWPGRVQPGKKMPGQ 149 Query: 167 MGGNRVTVKNLEVVSVDDKRGLILVKGCVPGA 198 G V+VKN E++S D + G++++KG V GA Sbjct: 150 YGNTNVSVKN-EIISFDAETGILVLKGSVSGA 180 >gi|296272640|ref|YP_003655271.1| 50S ribosomal protein L3 [Arcobacter nitrofigilis DSM 7299] gi|296096814|gb|ADG92764.1| 50S ribosomal protein L3 [Arcobacter nitrofigilis DSM 7299] Length = 191 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 95/197 (48%), Gaps = 26/197 (13%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLH-LDN--CQVV--VHRTLDKNGYMAVQVGAGEAKVKN 60 + K+GM+ ++ +PVT+L LD C+V V NG + G+ K N Sbjct: 4 IVEKIGMSRTVSVPA--VPVTLLKVLDTKVCEVTDGVAIVSYSNGKKFNKTIEGQQKKYN 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SK F + E + DL S +++ T T G+GF Sbjct: 62 LSKEFNRFAT----------MEVANSEAGDL-------DVSGLAEAKILKTTFKTKGRGF 104 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SGA+KR NF G RA+HG + R+ GS G + PGRV KKM G+ G V+VKN E+ Sbjct: 105 SGAVKRWNFAGGRASHGHRMGKRT-GSIGNAEWPGRVQPGKKMPGQYGNTNVSVKN-EIF 162 Query: 181 SVDDKRGLILVKGCVPG 197 S D + G++ VKG V G Sbjct: 163 SFDAETGILAVKGSVSG 179 >gi|13310854|gb|AAK18645.1|AF250390_3 ribosomal protein L3 [Candidatus Carsonella ruddii] Length = 136 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/91 (40%), Positives = 56/91 (61%), Gaps = 3/91 (3%) Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168 + ++ ++ GKGF+G +K+ NF +HG S+S+R+ GS G QDPGRVFK KKM G+MG Sbjct: 40 LKISSISKGKGFAGVIKKWNFKTKDKSHGCSLSYRTLGSVGQCQDPGRVFKGKKMPGKMG 99 Query: 169 GNRVTVKNLEVVSVDDKRGLILVKGCVPGAK 199 ++T V K + +K +PG+K Sbjct: 100 NKKIT---FFVNIFLRKNDIFFIKTIIPGSK 127 >gi|146319921|ref|YP_001199632.1| ribosomal protein L3 [Streptococcus suis 98HAH33] gi|145690727|gb|ABP91232.1| Ribosomal protein L3 [Streptococcus suis 98HAH33] Length = 78 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/78 (55%), Positives = 54/78 (69%), Gaps = 3/78 (3%) Query: 135 THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGC 194 HG S HR GS G P RVFK K +AGRMGGNRVT++NLEVV V ++ +IL+KG Sbjct: 2 AHG-SRYHRRPGSMGP-VAPNRVFKGKNLAGRMGGNRVTIQNLEVVQVVPEKNVILIKGN 59 Query: 195 VPGAKKNSWILVRDSFKS 212 VPGAKK S I ++ + K+ Sbjct: 60 VPGAKK-SLITIKSAVKA 76 >gi|169929958|gb|ACB05656.1| 50S ribosomal protein L3 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 94 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 42/84 (50%), Positives = 50/84 (59%), Gaps = 1/84 (1%) Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 GKG G +KRH F G A HG S R GS G PGRVFK KM GRMG + TV+N Sbjct: 3 GKGTQGVVKRHGFAGGPAGHG-SRFQRHPGSIGSNTTPGRVFKGLKMGGRMGSEQTTVRN 61 Query: 177 LEVVSVDDKRGLILVKGCVPGAKK 200 L+VV +D L+ V G VPG ++ Sbjct: 62 LKVVKIDADANLVFVSGPVPGRER 85 >gi|154148794|ref|YP_001405697.1| 50S ribosomal protein L3 [Campylobacter hominis ATCC BAA-381] gi|153804803|gb|ABS51810.1| ribosomal protein L3 [Campylobacter hominis ATCC BAA-381] Length = 191 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 65/195 (33%), Positives = 96/195 (49%), Gaps = 22/195 (11%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDN---CQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 + K+GM+ I+ IPVT+L + N C+V +G V G+A + Sbjct: 4 IVEKIGMS--RTIDNPSIPVTLLRVVNAKICEV-------NDGKAVVAYANGKA----FN 50 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K + G N+S + F ++ + VG S F + V + + G+G+ G Sbjct: 51 KAIAGIQKKYNLSKEFNKFATLCVENAE---VGDQ-SIEIFNNAKFVKSSFTSKGRGYQG 106 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G +HG S HR HGS G + PGRV +MAG MG +VTVKN E+V Sbjct: 107 VMKRHGFAGGPKSHG-SRFHRRHGSIGNCEWPGRVQPGMRMAGHMGNVKVTVKN-EIVKF 164 Query: 183 DDKRGLILVKGCVPG 197 D + ++++KG V G Sbjct: 165 DAENRILVLKGAVAG 179 >gi|124487970|gb|ABN12068.1| mitochondrial ribosomal protein L3-llike protein [Maconellicoccus hirsutus] Length = 170 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 1/109 (0%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 +F VG VDV G+TI +GF G MKR F G ATHG + +HR G+ G +D +V Sbjct: 6 PHFKVGDYVDVRGLTIQRGFQGVMKRWGFHGQPATHGQTKTHRRPGTIGRGRD-KKVQIG 64 Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 KK+ G MG T++ L+++ ++ K +I V+G NS + V D+ Sbjct: 65 KKLPGHMGYRYRTLRGLQILRMNTKYNVIWVQGQAIAGDTNSIVYVYDT 113 >gi|78776487|ref|YP_392802.1| 50S ribosomal protein L3 [Sulfurimonas denitrificans DSM 1251] gi|78497027|gb|ABB43567.1| LSU ribosomal protein L3P [Sulfurimonas denitrificans DSM 1251] Length = 191 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 96/198 (48%), Gaps = 26/198 (13%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ + + PVT+L + + +V + + +A + G K ++K + Sbjct: 4 IVEKIGMSRTITVPSK--PVTLLRVLDAKVC--EVNENSAIVAYKSG------KKMNKAI 53 Query: 66 RGFFSSVNVSPK-KKLFEFRVQK----DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 G ++S + + V D DL P+ +++ T T G+GF Sbjct: 54 EGQQKKYSISSEFNRFVTLEVANSEAGDIDLTPLAEA---------KVIKATFTTKGRGF 104 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NF G A HG R+ GS G + PGRV K KKM G+ G + +VKN E++ Sbjct: 105 TGAMKRWNFSGGPAEHGHRFGRRT-GSIGNAEWPGRVMKGKKMPGQYGNTQNSVKN-EII 162 Query: 181 SVDDKRGLILVKGCVPGA 198 S D + +I V G V GA Sbjct: 163 SFDAENKIIAVVGSVSGA 180 >gi|116335057|ref|YP_802552.1| ribosomal protein L3 [Candidatus Carsonella ruddii PV] gi|13272299|gb|AAK17082.1|AF274444_12 ribosomal protein L3 [Candidatus Carsonella ruddii] gi|116235338|dbj|BAF35186.1| ribosomal protein L3 [Candidatus Carsonella ruddii PV] Length = 136 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 39/100 (39%), Positives = 60/100 (60%), Gaps = 4/100 (4%) Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166 + + + ++ GKGF+G +K+ NF +HG S+S+R+ GS G QDPGRVFK KKM G+ Sbjct: 38 KTLKIISISKGKGFAGVIKKWNFKTKDKSHGCSLSYRTLGSVGQCQDPGRVFKGKKMPGK 97 Query: 167 MGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206 MG + T V K+ + +K +PG+ KN ++ V Sbjct: 98 MGNKKNT---FFVDVFLRKKNIFFIKKIIPGS-KNDYLYV 133 >gi|313631759|gb|EFR98952.1| ribosomal protein L3 [Listeria seeligeri FSL N1-067] Length = 93 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 2/81 (2%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G ++D TG++ GKGF G +KRH HG S HR GS G P RVFKNK Sbjct: 8 FAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKL 65 Query: 163 MAGRMGGNRVTVKNLEVVSVD 183 + GRMGG ++T++NLE+V VD Sbjct: 66 LPGRMGGEQITIQNLEIVKVD 86 >gi|32262929|gb|AAP77975.1| ribosomal protein L3 [Helicobacter hepaticus ATCC 51449] Length = 183 Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 43/89 (48%), Positives = 55/89 (61%), Gaps = 2/89 (2%) Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168 V V+ T G+GFSGAMKR NF G HG S HR GS G R+ PGRV KKMAG G Sbjct: 85 VQVSFKTKGRGFSGAMKRWNFQGGPGAHG-SRFHRRLGSIGNREWPGRVQPGKKMAGHYG 143 Query: 169 GNRVTVKNLEVVSVDDKRGLILVKGCVPG 197 V+ KN +++S D + ++++KG V G Sbjct: 144 NELVSAKN-DIMSFDKQSAILVLKGSVAG 171 >gi|161546624|ref|NP_860909.2| 50S ribosomal protein L3 [Helicobacter hepaticus ATCC 51449] gi|42559601|sp|Q7VGE4|RL3_HELHP RecName: Full=50S ribosomal protein L3 Length = 192 Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 43/89 (48%), Positives = 55/89 (61%), Gaps = 2/89 (2%) Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168 V V+ T G+GFSGAMKR NF G HG S HR GS G R+ PGRV KKMAG G Sbjct: 94 VQVSFKTKGRGFSGAMKRWNFQGGPGAHG-SRFHRRLGSIGNREWPGRVQPGKKMAGHYG 152 Query: 169 GNRVTVKNLEVVSVDDKRGLILVKGCVPG 197 V+ KN +++S D + ++++KG V G Sbjct: 153 NELVSAKN-DIMSFDKQSAILVLKGSVAG 180 >gi|257458708|ref|ZP_05623832.1| 50S ribosomal protein L3 [Campylobacter gracilis RM3268] gi|257443897|gb|EEV19016.1| 50S ribosomal protein L3 [Campylobacter gracilis RM3268] Length = 192 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 15/192 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ I+ PVT+L L N ++ D+ + V G+A K ++ Sbjct: 4 IVEKIGMS--RTIDTSSTPVTLLRLINTKIC--EVCDEKKAI-VAYADGKAYNKAIAGIQ 58 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 + + S + L + D L V + ++V V+ + GKG+ G +K Sbjct: 59 KKYSLSKEFNKFATLSLENAELGDQNLDV--------LSEAKIVKVSFRSKGKGYQGVIK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 RH F G A HG S HR GS G + PGRV +MAG G +T KN EVVS D + Sbjct: 111 RHGFAGGPAAHG-SRFHRRPGSIGNCEWPGRVQPGMRMAGHTGNETITAKN-EVVSFDAE 168 Query: 186 RGLILVKGCVPG 197 ++++KG VPG Sbjct: 169 NKILVLKGSVPG 180 >gi|66766345|dbj|BAD99041.1| ribosomal protein L3 [Desulfovibrio vulgaris] Length = 115 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 1/110 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT ++ +G + VTV+ C V+ R + +GY AVQ+ EAK K+V+K Sbjct: 6 GILGRKVGMTRIFASDGSAVAVTVIQAGPCPVIQVRNGETDGYDAVQIAFEEAKEKHVTK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113 P RG F+ + L E R++ + VG + S F G+ V VTG Sbjct: 66 PARGHFAKAGKGLFRNLREIRLEAPAE-FEVGQELTVSLFAAGEKVKVTG 114 >gi|153803653|ref|ZP_01958239.1| ribosomal protein L3 [Vibrio cholerae MZO-3] gi|124120812|gb|EAY39555.1| ribosomal protein L3 [Vibrio cholerae MZO-3] Length = 93 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/88 (37%), Positives = 54/88 (61%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV G K V+K Sbjct: 3 GLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGSKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL 91 P G F+ V + L+EFR++ ++ Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLENGEEF 90 >gi|224437283|ref|ZP_03658255.1| 50S ribosomal protein L3 [Helicobacter cinaedi CCUG 18818] gi|313143738|ref|ZP_07805931.1| 50S ribosomal protein L3 [Helicobacter cinaedi CCUG 18818] gi|313128769|gb|EFR46386.1| 50S ribosomal protein L3 [Helicobacter cinaedi CCUG 18818] Length = 192 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/89 (50%), Positives = 55/89 (61%), Gaps = 2/89 (2%) Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168 V V T G+GFSGAMKR NF G A HG S HR GS G R+ PGRV KKMAG G Sbjct: 94 VQVRFKTKGRGFSGAMKRWNFQGGPAAHG-SRFHRRLGSIGNREWPGRVQPGKKMAGHYG 152 Query: 169 GNRVTVKNLEVVSVDDKRGLILVKGCVPG 197 V+ KN +V+S D + ++++KG V G Sbjct: 153 NELVSGKN-DVMSFDKESAILVLKGSVAG 180 >gi|146319920|ref|YP_001199631.1| 50S ribosomal protein L3 [Streptococcus suis 98HAH33] gi|145690726|gb|ABP91231.1| 50S ribosomal protein L3 [Streptococcus suis 98HAH33] Length = 112 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/113 (35%), Positives = 64/113 (56%), Gaps = 3/113 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYAAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113 +KP +G + N +PK+ + EF K+ + L VG + F G +VDVTG Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGQEITVETFAAGDVVDVTG 110 >gi|581341|emb|CAA78677.1| ribosomal protein L3 [Mycobacterium leprae] Length = 100 Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 35/88 (39%), Positives = 54/88 (61%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ R +PVTV+ V RTL+++GY AVQ+ GE + V Sbjct: 4 RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTLERDGYSAVQLAYGEISPRKV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDD 89 +KP+ G ++S V+P++ L E R+ D Sbjct: 64 NKPVTGQYNSAGVNPRRYLAELRLDHPD 91 >gi|255017639|ref|ZP_05289765.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL F2-515] Length = 79 Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 38/78 (48%), Positives = 54/78 (69%), Gaps = 3/78 (3%) Query: 135 THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGC 194 HG S HR GS G P RVFKNK + GRMGG ++T++NLE+V VD ++ ++LVKG Sbjct: 4 AHG-SRYHRRPGSMGP-VAPNRVFKNKLLPGRMGGEQITIQNLEIVKVDVEKNVLLVKGN 61 Query: 195 VPGAKKNSWILVRDSFKS 212 VPGAKK + + ++ + K+ Sbjct: 62 VPGAKK-ALVQIKTATKA 78 >gi|70951495|ref|XP_744983.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56525155|emb|CAH78805.1| hypothetical protein PC001313.02.0 [Plasmodium chabaudi chabaudi] Length = 185 Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 4/139 (2%) Query: 79 KLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGV 138 K+ EF+ D LPV FS +F+ GQ + ++ KGF GAM++ NF G +HG Sbjct: 1 KIREFKCT-SDCFLPVQHKFSARHFSPGQNLFISSSIKNKGFCGAMQKWNFSGKNQSHGT 59 Query: 139 -SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEVVSVDDKRGLILVKGCVP 196 S +HRS GS + VF+NKKM +G V N ++ ++ + L+ +KG + Sbjct: 60 ESKAHRSLGSVSMGKTINIVFRNKKMNTHIGEKSLVKCSNNKLFRINSLKNLLFIKGTI- 118 Query: 197 GAKKNSWILVRDSFKSAVN 215 G KN I + D+ A N Sbjct: 119 GGYKNKIIKISDAKGRAFN 137 >gi|314984921|gb|EFT29013.1| 50S ribosomal protein L3 domain protein [Propionibacterium acnes HL005PA1] Length = 89 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/75 (44%), Positives = 46/75 (61%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ KLGMT +++ R +PVTV+ C V RT + +GY AVQ+G G K KNV+K Sbjct: 14 GVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKNVTK 73 Query: 64 PMRGFFSSVNVSPKK 78 P G F V+P++ Sbjct: 74 PEAGHFEKAGVTPRR 88 >gi|182418827|ref|ZP_02950092.1| 50S ribosomal protein L3 [Clostridium butyricum 5521] gi|182377324|gb|EDT74885.1| 50S ribosomal protein L3 [Clostridium butyricum 5521] Length = 77 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 1/71 (1%) Query: 135 THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGC 194 THG S HR+ GS G DP R FKNK+M G MG TV NL+VV V ++ LIL+KG Sbjct: 2 THG-SKFHRAPGSMGASSDPSRTFKNKRMPGHMGSVNTTVLNLQVVKVIAEKNLILIKGG 60 Query: 195 VPGAKKNSWIL 205 +PG K + ++ Sbjct: 61 IPGPNKGTVVI 71 >gi|213416462|ref|ZP_03349606.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 97 Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 12/106 (11%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109 P G F+ V + L+EFR+ + ++ +TVGQ + Sbjct: 63 PEAGHFAKAGVEAGRGLWEFRLAEGEE------------YTVGQSI 96 >gi|227871804|ref|ZP_03990207.1| possible ribosomal protein L3 [Oribacterium sinus F0268] gi|227842340|gb|EEJ52567.1| possible ribosomal protein L3 [Oribacterium sinus F0268] Length = 81 Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/80 (43%), Positives = 50/80 (62%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT +++ G IPVTVL C V +TL+ +GY AVQVG E + K Sbjct: 1 MKKAILATKVGMTQIWDENGVLIPVTVLQAGPCVVTQVKTLENDGYKAVQVGFLEKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKL 80 V+KP++G F VS K+ L Sbjct: 61 VNKPLKGQFDKAGVSYKRFL 80 >gi|212724032|ref|NP_001132440.1| hypothetical protein LOC100193892 [Zea mays] gi|194694386|gb|ACF81277.1| unknown [Zea mays] Length = 232 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 3/123 (2%) Query: 4 GVVARKLGMTCVYNIE-GRRIPVTVLHL-DNCQVVVH-RTLDKNGYMAVQVGAGEAKVKN 60 GV+A K+GM ++ E G+ +PVTV+ + VV +T +GY AVQVG + Sbjct: 46 GVMATKVGMMTYFDPETGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVREDK 105 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G P + L EFR+ D P + F G L+DV+G +IGKGF Sbjct: 106 LTRPELGHLGKAGAPPLRHLQEFRLTAVDAFEPGQPLDFADLFKEGDLIDVSGNSIGKGF 165 Query: 121 SGA 123 G+ Sbjct: 166 QGS 168 >gi|209528359|ref|ZP_03276810.1| 50S ribosomal protein L3 [Arthrospira maxima CS-328] gi|209491212|gb|EDZ91616.1| 50S ribosomal protein L3 [Arthrospira maxima CS-328] Length = 79 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 1/63 (1%) Query: 135 THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGC 194 HG S +HR GS G PGRV+ KKMAGR GG ++T + L +V +D +R L+L+KG Sbjct: 1 AHG-SKNHRLPGSIGPGTTPGRVYPGKKMAGRYGGKQITTRKLTIVRIDLERNLLLIKGS 59 Query: 195 VPG 197 +PG Sbjct: 60 IPG 62 >gi|149195353|ref|ZP_01872439.1| 50S ribosomal protein L3 [Caminibacter mediatlanticus TB-2] gi|149134485|gb|EDM22975.1| 50S ribosomal protein L3 [Caminibacter mediatlanticus TB-2] Length = 192 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 62/194 (31%), Positives = 94/194 (48%), Gaps = 17/194 (8%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ + + IPVT+L + +V + ++G V G K V+KP+ Sbjct: 4 IVEKIGMS--RTVGEKSIPVTLLKIVPAKVC---EVKEDGKALVAYPKG----KKVNKPI 54 Query: 66 RGFFSSVNVSPK-KKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G +S + + E +V + S + V +T + G+GF G + Sbjct: 55 EGMQKKYGLSKEFNRFVELKVANTE-----AGDLSLEPLNEAKKVKITFKSKGRGFQGVV 109 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR+ FGG +H S HR+ GS G + PGRV KKM G G VTV N EVV + Sbjct: 110 KRYGFGGGPGSH-GSRFHRAPGSIGNCEFPGRVMPGKKMPGHYGNKNVTV-NAEVVEFNP 167 Query: 185 KRGLILVKGCVPGA 198 G++++KG VPGA Sbjct: 168 DMGVLVIKGSVPGA 181 >gi|154340798|ref|XP_001566352.1| ribosomal protein L3-like protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134063675|emb|CAM39860.1| ribosomal protein L3-like protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 467 Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 60/219 (27%), Positives = 93/219 (42%), Gaps = 8/219 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKVK 59 +R G+V K+ Y+ G + T + Q+V H T + + G V VGA V+ Sbjct: 129 VRFGMVGVKVFTCKDYDDLGNQFDCTAFWFPDNQIVKHSTRNGDVGTDKVYVGAMNVPVE 188 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + F+ + V K F V D PVG+ +F GQ V +T G Sbjct: 189 FHKPHVAAFYKAAGVPVKHVSAGFPVTPDA-YAPVGTKLDVRHFKPGQEVTITFQNTDYG 247 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 + G M RH F G G S R G G + R++ +MAG+ G + T + + V Sbjct: 248 YQGVMFRHGFDGGYVWLGDSKWQRRPGCMGA-EGQKRIYPGHRMAGQTGASAETYQGVPV 306 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +D K LI + + A +++ RD+ +N KG Sbjct: 307 WRIDYKNSLIYLPTLI-DADVGTYVKFRDT----INTKG 340 >gi|296090209|emb|CBI40028.3| unnamed protein product [Vitis vinifera] Length = 99 Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 37/78 (47%), Positives = 44/78 (56%), Gaps = 1/78 (1%) Query: 78 KKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHG 137 + L EFR+ D P + F G LVDV+G+TIGKGF G +KRHNF THG Sbjct: 2 RHLQEFRLVSVDGFEPNQKLVFEELFKEGDLVDVSGITIGKGFQGGIKRHNFRRGPMTHG 61 Query: 138 VSISHRSHGSTGCRQDPG 155 S SHR+ GS G PG Sbjct: 62 -SKSHRALGSIGAGTTPG 78 >gi|207108256|ref|ZP_03242418.1| 50S ribosomal protein L3 [Helicobacter pylori HPKX_438_CA4C1] Length = 128 Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 2/76 (2%) Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N EV+S Sbjct: 44 GVMKRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLS 101 Query: 182 VDDKRGLILVKGCVPG 197 D + ++++KG V G Sbjct: 102 FDKESMVLVLKGSVAG 117 >gi|146092753|ref|XP_001466509.1| ribosomal protein L3-like protein [Leishmania infantum] gi|134070872|emb|CAM69548.1| ribosomal protein L3-like protein [Leishmania infantum JPCM5] Length = 467 Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 93/220 (42%), Gaps = 10/220 (4%) Query: 1 MRSGVVARKLGMTCV-YNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKV 58 +R G++ K TC Y+ G + T + Q+V H T + + G V VGA V Sbjct: 129 VRFGMIGVK-AFTCKDYDDLGNQFDCTAFWFPDNQIVKHSTRNGDVGTDKVYVGAMNVPV 187 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 + + F+ + V K F V D PVG+ +F GQ V +T Sbjct: 188 EFHKPHVAAFYKAAGVPVKHVSAGFPVTPDA-YAPVGTKLDVRHFKPGQEVTITFQNTDY 246 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G+ G M RH F G G S R G G + R++ +MAG+ G + T + Sbjct: 247 GYQGVMFRHGFDGGYVWLGDSKWQRRPGCMGA-EGQKRIYPGHRMAGQTGASAETYDGVP 305 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 V +D K LI + + A +++ RD+ +N KG Sbjct: 306 VWRIDYKNSLIYLPTLI-DADVGTYVKFRDT----INTKG 340 >gi|73536476|ref|XP_847662.1| ribosomal protein L3-like protein [Leishmania major strain Friedlin] gi|321438575|emb|CBZ12334.1| ribosomal protein L3-like protein [Leishmania major strain Friedlin] Length = 467 Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 93/220 (42%), Gaps = 10/220 (4%) Query: 1 MRSGVVARKLGMTCV-YNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKV 58 +R G++ K TC Y+ G + T + Q+V H T + + G V VGA V Sbjct: 129 VRFGMIGVK-AFTCKDYDDLGNQFDCTAFWFPDNQIVKHSTRNGDVGTDKVYVGAMNVPV 187 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 + + F+ + V K F V D PVG+ +F GQ V +T Sbjct: 188 EFHKPHVAAFYKAAGVPVKHVSAGFPVTPDA-YAPVGTKLDVRHFKPGQEVTITFQNTDY 246 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G+ G M RH F G G S R G G + R++ +MAG+ G + T + Sbjct: 247 GYQGVMFRHGFDGGYVWLGDSKWQRRPGCMGA-EGQKRIYPGHRMAGQTGASAETYDGVP 305 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 V +D K LI + + A +++ RD+ +N KG Sbjct: 306 VWRIDYKNSLIYLPTLI-DADVGTYVKFRDT----INTKG 340 >gi|322500651|emb|CBZ35728.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 467 Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 93/220 (42%), Gaps = 10/220 (4%) Query: 1 MRSGVVARKLGMTCV-YNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKV 58 +R G++ K TC Y+ G + T + Q+V H T + + G V VGA V Sbjct: 129 VRFGMIGVK-AFTCKDYDELGNQFDCTAFWFPDNQIVKHSTRNGDVGTDKVYVGAMNVPV 187 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 + + F+ + V K F V D PVG+ +F GQ V +T Sbjct: 188 EFHKPHVAAFYKAAGVPVKHVSAGFPVTPDA-YAPVGTKLDVRHFKPGQEVTITFQNTDY 246 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G+ G M RH F G G S R G G + R++ +MAG+ G + T + Sbjct: 247 GYQGVMFRHGFDGGYVWLGDSKWQRRPGCMGA-EGQKRIYPGHRMAGQTGASAETYDGVP 305 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 V +D K LI + + A +++ RD+ +N KG Sbjct: 306 VWRIDYKNSLIYLPTLI-DADVGTYVKFRDT----INTKG 340 >gi|322488784|emb|CBZ24031.1| ribosomal protein L3-like protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 467 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 93/220 (42%), Gaps = 10/220 (4%) Query: 1 MRSGVVARKLGMTCV-YNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKV 58 +R G++ K TC Y+ G + T + Q+V H T + + G V VGA V Sbjct: 129 VRFGLIGVK-AFTCKDYDDLGNQFDCTAFWFPDNQIVKHSTRNGDVGTDKVYVGAMNVPV 187 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 + + F+ + V K F + D PVG+ +F GQ V +T Sbjct: 188 EFHKPHVAAFYKAAGVPVKHVSAGFPITPDA-YAPVGTKLDVRHFKPGQEVTITFQNTDY 246 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G+ G M RH F G G S R G G + R++ +MAG+ G + T + Sbjct: 247 GYQGVMFRHGFDGGYVWLGDSKWQRRPGCMGA-EGQKRIYPGHRMAGQTGASAETYDGVP 305 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 V +D K LI + + A +++ RD+ +N KG Sbjct: 306 VWRIDYKNSLIYLPTLI-DADVGTYVKFRDT----INTKG 340 >gi|169929919|gb|ACB05630.1| 50S ribosomal protein L3 [Leptospira borgpetersenii serovar Hardjo-bovis] gi|169929922|gb|ACB05632.1| 50S ribosomal protein L3 [Leptospira borgpetersenii serovar Hardjo-bovis] gi|169929955|gb|ACB05654.1| 50S ribosomal protein L3 [Leptospira meyeri serovar Ranarum] Length = 93 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 1/82 (1%) Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 G+GF G +KRH G H S HR GS G P RVFK K+ GR G + TV+N Sbjct: 3 GRGFQGVVKRHGHAGGPGGH-GSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQQTTVRN 61 Query: 177 LEVVSVDDKRGLILVKGCVPGA 198 L+VV +++++ L+ V G VPG Sbjct: 62 LKVVRINEEKNLVFVSGAVPGT 83 >gi|224373649|ref|YP_002608021.1| 50S ribosomal protein L3 [Nautilia profundicola AmH] gi|223589482|gb|ACM93218.1| ribosomal protein L3 [Nautilia profundicola AmH] Length = 191 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/90 (44%), Positives = 54/90 (60%), Gaps = 2/90 (2%) Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168 V +T + G+GF G +KRH F G H S HR+ GS G + PGRV +KM G+ G Sbjct: 93 VKLTFKSKGRGFQGVVKRHGFAGGPGGH-GSRFHRAPGSIGNCEWPGRVMPGRKMPGQYG 151 Query: 169 GNRVTVKNLEVVSVDDKRGLILVKGCVPGA 198 VTV N EV+ D+ G++++KG VPGA Sbjct: 152 NKNVTV-NAEVLEYDENMGVLVIKGSVPGA 180 >gi|71411062|ref|XP_807797.1| mitochondrial ribosomal protein L3 [Trypanosoma cruzi strain CL Brener] gi|70871872|gb|EAN85946.1| mitochondrial ribosomal protein L3, putative [Trypanosoma cruzi] Length = 473 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 92/220 (41%), Gaps = 10/220 (4%) Query: 1 MRSGVVARKLGMTCV-YNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKV 58 +R G+V K TC Y+ G + T + Q+V H T + + G V VGA V Sbjct: 136 VRFGMVGVK-AFTCKDYDELGNQFDCTAFWFPDNQIVRHSTRNGDVGTDRVYVGAMNVPV 194 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 + + F+ + V K F + D PVG+ +F GQ V +T Sbjct: 195 EFHKPHVAAFYKAAGVPVKHVCAGFPITPDA-YAPVGTKLDVRHFKPGQEVTITFQNTDY 253 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G M RH F G G S R G G + R++ +MAG+ G + T + + Sbjct: 254 GFRGVMFRHGFDGGYVWLGDSKWQRRPGCMGT-EGQKRIYPGHRMAGQTGASAETYQGVP 312 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 V +D K LI + + A +++ F +N KG Sbjct: 313 VWRIDYKNALIYLPTLI-DADVGTYV----KFSDTINTKG 347 >gi|322821701|gb|EFZ27955.1| mitochondrial ribosomal protein L3, putative [Trypanosoma cruzi] Length = 425 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 92/220 (41%), Gaps = 10/220 (4%) Query: 1 MRSGVVARKLGMTCV-YNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKV 58 +R G+V K TC Y+ G + T + Q+V H T + + G V VGA V Sbjct: 88 VRFGMVGVK-AFTCKDYDELGNQFDCTAFWFPDNQIVRHSTRNGDVGTDRVYVGAMNVPV 146 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 + + F+ + V K F + D PVG+ +F GQ V +T Sbjct: 147 EFHKPHVAAFYKAAGVPVKHVCAGFPITPDA-YAPVGTKLDVRHFKPGQEVTITFQNTDY 205 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G M RH F G G S R G G + R++ +MAG+ G + T + + Sbjct: 206 GFRGVMFRHGFDGGYVWLGDSKWQRRPGCMGT-EGQKRIYPGHRMAGQTGASAETYQGVP 264 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 V +D K LI + + A +++ F +N KG Sbjct: 265 VWRIDYKNALIYLPTLI-DADVGTYV----KFSDTINTKG 299 >gi|242052021|ref|XP_002455156.1| hypothetical protein SORBIDRAFT_03g005220 [Sorghum bicolor] gi|241927131|gb|EES00276.1| hypothetical protein SORBIDRAFT_03g005220 [Sorghum bicolor] Length = 144 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/68 (39%), Positives = 46/68 (67%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GV+ K GM+ +++ G ++P+TVL +D+ V +T +K G+ A+Q+GAG+ K K++ Sbjct: 71 RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVTQVKTAEKEGFFALQLGAGQKKEKHL 130 Query: 62 SKPMRGFF 69 KP G F Sbjct: 131 PKPEVGHF 138 >gi|169929907|gb|ACB05622.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Lai] gi|169929910|gb|ACB05624.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Icterohaemorrhagiae] gi|169929913|gb|ACB05626.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Hardjo-prajitno] gi|169929916|gb|ACB05628.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Malaya] gi|169929943|gb|ACB05646.1| 50S ribosomal protein L3 [Leptospira kirschneri serovar Mozdok] gi|169929946|gb|ACB05648.1| 50S ribosomal protein L3 [Leptospira kirschneri serovar Bim] Length = 93 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 1/82 (1%) Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 G+G+ G +KRH G H S HR GS G P RVFK K+ GR G + TV+N Sbjct: 3 GRGYQGVVKRHGHAGGPGAH-GSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQKTTVRN 61 Query: 177 LEVVSVDDKRGLILVKGCVPGA 198 L+VV +++++ L+ V G VPG Sbjct: 62 LKVVRINEEKNLLFVSGAVPGT 83 >gi|169929931|gb|ACB05638.1| 50S ribosomal protein L3 [Leptospira noguchii serovar Proechymis] gi|169929934|gb|ACB05640.1| 50S ribosomal protein L3 [Leptospira noguchii serovar Panama] Length = 93 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 1/82 (1%) Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 G+G+ G +KRH G H S HR GS G P RVFK K+ GR G + TV+N Sbjct: 3 GRGYQGVVKRHGHAGGPGAH-GSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQQTTVRN 61 Query: 177 LEVVSVDDKRGLILVKGCVPGA 198 L+VV +++++ L+ V G VPG Sbjct: 62 LKVVRINEEKNLLFVSGAVPGT 83 >gi|72387453|ref|XP_844151.1| ribosomal protein L3 mitochondrial [Trypanosoma brucei TREU927] gi|62360659|gb|AAX81070.1| ribosomal protein L3 mitochondrial, putative [Trypanosoma brucei] gi|70800683|gb|AAZ10592.1| ribosomal protein L3 mitochondrial, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] gi|261327312|emb|CBH10288.1| ribosomal protein L3 mitochondrial, putative [Trypanosoma brucei gambiense DAL972] Length = 473 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 93/222 (41%), Gaps = 14/222 (6%) Query: 1 MRSGVVARKLGMTCV-YNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMA---VQVGAGEA 56 +R G+V K TC Y+ G + T + QVV H T +NG + V VGA Sbjct: 136 VRFGMVGVK-AFTCKDYDELGNQFDCTAFWFPDNQVVKHST--RNGEVGTDKVYVGAMNV 192 Query: 57 KVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116 V+ + F+ + V K F + D PVG+ +F GQ V +T Sbjct: 193 PVEFHKPHVAAFYKAAGVPVKHVCAGFPITPDA-YAPVGTKLDVRHFKPGQEVTITFQNT 251 Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 GF G M RH F G G S R G+ G + R++ +MAG+ G T + Sbjct: 252 DYGFRGVMFRHGFDGGYVWLGDSRWQRRPGAMGT-EGQKRIYPGHRMAGQTGAAAETYQG 310 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 + V +D K LI + + A +++ F +N KG Sbjct: 311 VPVWRIDYKNSLIYLPTLL-DADVGTYV----RFSDTINTKG 347 >gi|330899737|gb|EGH31156.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. japonica str. M301072PT] Length = 77 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 31/75 (41%), Positives = 44/75 (58%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVS 75 V+ G F+ NV+ Sbjct: 61 VTAAQAGHFAKANVA 75 >gi|169929937|gb|ACB05642.1| 50S ribosomal protein L3 [Leptospira weilii serovar Sarmin] gi|169929940|gb|ACB05644.1| 50S ribosomal protein L3 [Leptospira weilii serovar Celledoni] Length = 93 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 1/82 (1%) Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 G+GF G +KRH G H S HR GS G P RVFK K+ GR G + TV+N Sbjct: 3 GRGFQGVVKRHGHAGGPGGH-GSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSLQTTVRN 61 Query: 177 LEVVSVDDKRGLILVKGCVPGA 198 L+VV +++++ L+ V G VPG Sbjct: 62 LKVVRINEEKNLVFVSGAVPGT 83 >gi|169929949|gb|ACB05650.1| 50S ribosomal protein L3 [Leptospira alexanderi serovar Mengla] gi|169929952|gb|ACB05652.1| 50S ribosomal protein L3 [Leptospira alexanderi serovar Manzhuang] Length = 93 Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 1/82 (1%) Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 G+GF G +KRH G H S HR GS G P RVFK K+ GR G + TV+N Sbjct: 3 GRGFQGVVKRHGHAGGPGGH-GSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSLQTTVRN 61 Query: 177 LEVVSVDDKRGLILVKGCVPGA 198 L+VV +++++ L+ V G VPG Sbjct: 62 LKVVRINEEKNLVFVSGSVPGT 83 >gi|169929925|gb|ACB05634.1| 50S ribosomal protein L3 [Leptospira santarosai serovar Tropica] gi|169929928|gb|ACB05636.1| 50S ribosomal protein L3 [Leptospira santarosai serovar Shermani] Length = 93 Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%) Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 G+G+ G +KRH G H S HR GS G P RVFK K+ GR G + T++N Sbjct: 3 GRGYQGVVKRHGHAGGPGGH-GSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQQTTIRN 61 Query: 177 LEVVSVDDKRGLILVKGCVPGAK 199 L+VV +++++ L+ V G +PG + Sbjct: 62 LKVVRINEEKNLLFVSGSIPGTE 84 >gi|260222805|emb|CBA32730.1| hypothetical protein Csp_D33610 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 65 Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 1/59 (1%) Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 PGRVF K+M G +G VT +NL+V+ VD+ R L+L+KG +PG+ K ++ VR + K+ Sbjct: 1 PGRVFPGKRMTGHLGDATVTTQNLDVIRVDEARQLLLIKGAIPGS-KGGFVTVRPAVKA 58 >gi|94993441|ref|YP_601539.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10750] gi|94546949|gb|ABF36995.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10750] Length = 88 Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 50/84 (59%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFR 84 +KP +G + N +PK+ + EF+ Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFK 84 >gi|293556601|ref|ZP_06675169.1| ribosomal protein L3 [Enterococcus faecium E1039] gi|291601277|gb|EFF31561.1| ribosomal protein L3 [Enterococcus faecium E1039] Length = 101 Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 50/84 (59%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQVKTMETDGYEAIQVGYQDMREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFR 84 +KP +G + N +PK+ + EF+ Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFK 84 >gi|171185278|ref|YP_001794197.1| 50S ribosomal protein L3P [Thermoproteus neutrophilus V24Sta] gi|212288414|sp|B1YD88|RL3_THENV RecName: Full=50S ribosomal protein L3P gi|170934490|gb|ACB39751.1| ribosomal protein L3 [Thermoproteus neutrophilus V24Sta] Length = 338 Score = 58.2 bits (139), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 47/130 (36%), Positives = 61/130 (46%), Gaps = 20/130 (15%) Query: 94 VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G SP FT GQLVDV +T GKG+ G +KR L H HR G+ G Q Sbjct: 185 LGKTVSPKEVFTAGQLVDVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIGP-Q 243 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK----------------RG-LILVKGCV 195 P +F + G+MG ++ T N VV + D RG IL++G V Sbjct: 244 APALMFTQPR-PGQMGFHQRTEYNKRVVKIGDNGAEITPKSGFLHYGVIRGPYILIQGTV 302 Query: 196 PGAKKNSWIL 205 PGAKK +L Sbjct: 303 PGAKKRLVVL 312 >gi|41615218|ref|NP_963716.1| 50S ribosomal protein L3P [Nanoarchaeum equitans Kin4-M] gi|42559579|sp|P60458|RL3_NANEQ RecName: Full=50S ribosomal protein L3P gi|40068942|gb|AAR39277.1| NEQ433 [Nanoarchaeum equitans Kin4-M] Length = 321 Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 18/125 (14%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F GQ VDV +T GKGF G +KR F R H R G+ G R PGR+F Sbjct: 183 FKEGQYVDVIAVTKGKGFQGVIKR--FHVHRRQHKSEKGVRKVGAIGSR-GPGRIFPTVP 239 Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGL--------------ILVKGCVPGAKKNSWILVRD 208 M G+MG +R T N ++ + + + IL+KG VPG +K I++R+ Sbjct: 240 MPGQMGYHRRTEYNKLIIKIGEPLNVEGGWVRYGQVIGPTILLKGSVPGPRKRL-IILRE 298 Query: 209 SFKSA 213 + + Sbjct: 299 AIRPP 303 >gi|313111417|ref|ZP_07797222.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa 39016] gi|310883724|gb|EFQ42318.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa 39016] Length = 57 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/56 (51%), Positives = 41/56 (73%), Gaps = 1/56 (1%) Query: 157 VFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +FK KKM+G +G RVTV++LE+V VD +R L+LVKG VPGA ++VR + K+ Sbjct: 1 MFKGKKMSGHLGAERVTVQSLEIVRVDAERNLLLVKGAVPGATGGD-VIVRPAAKA 55 >gi|119873281|ref|YP_931288.1| 50S ribosomal protein L3P [Pyrobaculum islandicum DSM 4184] gi|212288410|sp|A1RVG3|RL3_PYRIL RecName: Full=50S ribosomal protein L3P gi|119674689|gb|ABL88945.1| LSU ribosomal protein L3P [Pyrobaculum islandicum DSM 4184] Length = 342 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 67/148 (45%), Gaps = 23/148 (15%) Query: 94 VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G SP FT GQLVDV +T GKG+ G +KR L H HR G+ G Q Sbjct: 189 LGKTVSPKEVFTAGQLVDVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIGP-Q 247 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCV 195 P +F + G+MG ++ T N ++ + D K IL++G V Sbjct: 248 APAVMFTQPR-PGQMGFHQRTEYNKRIIKIGDNGAEITPKSGFLHYGVVKGPYILIQGTV 306 Query: 196 PGAKKNSWIL---VRDSFKSAVNCKGKV 220 PGA+K +L VR K+ + +V Sbjct: 307 PGARKRLVVLRYPVRPPKKAPPAAEPQV 334 >gi|42858|emb|CAA23634.1| ribosomal protein L3 [Escherichia coli] Length = 80 Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 45/78 (57%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V+K Sbjct: 3 GLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLF 81 P G F+ V + L+ Sbjct: 63 PEAGHFAKAGVEAGRGLW 80 >gi|301500983|ref|YP_003795448.1| ribosomal protein L3 [Alveolata sp. CCMP3155] gi|300069529|gb|ADJ66636.1| ribosomal protein L3 [Chromerida sp. RM11] Length = 209 Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 11/114 (9%) Query: 88 DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGS 147 + LLP G +LV + G+ G GF+G + R+ F T G S HR+ GS Sbjct: 100 ESALLPTGP----------RLVCIRGVGKGHGFAGVVSRYGFSRGPMTRG-SKHHRAPGS 148 Query: 148 TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKN 201 G P RV+ KKM GR +R + + +D + L+ ++G VPG N Sbjct: 149 AGAGTFPSRVYPRKKMPGRWKTSRRKYNRVRPLKLDVRHSLLWLQGSVPGKTGN 202 >gi|198477055|ref|XP_002136783.1| GA27952 [Drosophila pseudoobscura pseudoobscura] gi|198145102|gb|EDY71806.1| GA27952 [Drosophila pseudoobscura pseudoobscura] Length = 229 Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 14/127 (11%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVV-------------VHRTLDKNGYMA 48 R GV+ARK+G ++ G+++ T+L + + V+ + R + N Y Sbjct: 104 RCGVIARKIGQYPLWLKNGKKVRTTLLQIADNHVIKYMPHEECRPQKNLSRVHNSNQYGC 163 Query: 49 VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQL 108 + VGA ++K G F V PKK + F V D L P G+ + S F VG+ Sbjct: 164 LLVGAESTNPSMLTKEYCGIFRDAGVVPKKNIMRFMVSPDGALAP-GTPLNISRFRVGEY 222 Query: 109 VDVTGMT 115 VDV G T Sbjct: 223 VDVRGKT 229 >gi|126460189|ref|YP_001056467.1| 50S ribosomal protein L3P [Pyrobaculum calidifontis JCM 11548] gi|212288409|sp|A3MWI4|RL3_PYRCJ RecName: Full=50S ribosomal protein L3P gi|126249910|gb|ABO09001.1| LSU ribosomal protein L3P [Pyrobaculum calidifontis JCM 11548] Length = 338 Score = 55.1 bits (131), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 67/148 (45%), Gaps = 23/148 (15%) Query: 94 VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G SP FT GQLVDV +T GKG+ G +KR L H HR G+ G Q Sbjct: 185 LGKTVSPKDVFTPGQLVDVIAVTKGKGYQGVVKRFGVTILPRWHKHRKGHRRTGTIGP-Q 243 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCV 195 P +F + G+MG ++ T N ++ + D K IL++G V Sbjct: 244 APALMFTQPR-PGQMGFHQRTEYNKRILKIGDNGAEITPKSGFPHYGVIKGPYILLQGSV 302 Query: 196 PGAKKNSWIL---VRDSFKSAVNCKGKV 220 PGA+K +L VR K+ + +V Sbjct: 303 PGARKRLVVLRYPVRPPKKAPPAAEPQV 330 >gi|86154135|ref|ZP_01072334.1| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni HB93-13] gi|85842375|gb|EAQ59591.1| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni HB93-13] Length = 144 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/51 (54%), Positives = 36/51 (70%), Gaps = 1/51 (1%) Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRV 157 +++ V+ T G+G+SG MKRHNF G A+HG S HR HGS G R+ PGRV Sbjct: 91 KILKVSFNTKGRGYSGVMKRHNFAGGPASHG-SRFHRRHGSIGNREWPGRV 140 >gi|328725484|ref|XP_003248496.1| PREDICTED: 50S ribosomal protein L4-like [Acyrthosiphon pisum] Length = 267 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/49 (57%), Positives = 34/49 (69%), Gaps = 1/49 (2%) Query: 135 THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +HG S HR GS G D +VFK K++ GRMGGN VT++NLEVV VD Sbjct: 2 SHG-SRYHRGSGSMGMASDASKVFKGKELPGRMGGNTVTMQNLEVVKVD 49 >gi|18313001|ref|NP_559668.1| 50S ribosomal protein L3P [Pyrobaculum aerophilum str. IM2] gi|42559672|sp|Q8ZW52|RL3_PYRAE RecName: Full=50S ribosomal protein L3P gi|18160502|gb|AAL63850.1| ribosomal protein L3 [Pyrobaculum aerophilum str. IM2] Length = 338 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/148 (31%), Positives = 67/148 (45%), Gaps = 23/148 (15%) Query: 94 VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G SP FT GQLVDV +T GKG+ G +KR L H HR G+ G Q Sbjct: 185 LGKTVSPKDVFTPGQLVDVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIGP-Q 243 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCV 195 P +F + G+MG ++ T N ++ + + K IL++G V Sbjct: 244 APAVMFTQPR-PGQMGFHQRTEYNKRLLKIGENGAEITPKSGFPHYGVVKGPYILIQGSV 302 Query: 196 PGAKKNSWIL---VRDSFKSAVNCKGKV 220 PGA+K +L VR K+ + +V Sbjct: 303 PGARKRLVVLRHPVRPPRKAPPAAEPQV 330 >gi|198462074|ref|XP_001352331.2| GA20958 [Drosophila pseudoobscura pseudoobscura] gi|198139691|gb|EAL29374.2| GA20958 [Drosophila pseudoobscura pseudoobscura] Length = 233 Score = 52.0 bits (123), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 1/85 (1%) Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 +++ GF G +KRH + G+ A+HGV+ +HR G+ G + GRV+ KM G MG Sbjct: 93 VSVDHGFQGVVKRHGYKGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKMPGHMGNRWRV 152 Query: 174 VKNLEVVSVDDKRGLILVKG-CVPG 197 +K L + + K ++ V+G VPG Sbjct: 153 LKGLRIWRTNAKYNVMWVQGSSVPG 177 >gi|305662572|ref|YP_003858860.1| LSU ribosomal protein L3P [Ignisphaera aggregans DSM 17230] gi|304377141|gb|ADM26980.1| LSU ribosomal protein L3P [Ignisphaera aggregans DSM 17230] Length = 340 Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 40/111 (36%), Positives = 53/111 (47%), Gaps = 9/111 (8%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGS--TGCRQDPGRVFKN 160 F VGQ +D+ G+T GKGF G +KR L H HR GS G R Sbjct: 197 FNVGQFIDIIGVTKGKGFQGVIKRFGVKELPRWH----KHRK-GSRRIGSRSPTIGAMSE 251 Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDS 209 AG+MG +R T N ++++ DK I G P G K+ WI+V+ S Sbjct: 252 TPQAGQMGFHRRTEYNKRILAMGDKGEEITPSGGFPHYGIVKSMWIMVQGS 302 >gi|145628333|ref|ZP_01784134.1| 50S ribosomal protein L4 [Haemophilus influenzae 22.1-21] gi|145640871|ref|ZP_01796453.1| 50S ribosomal protein L3 [Haemophilus influenzae R3021] gi|144980108|gb|EDJ89767.1| 50S ribosomal protein L4 [Haemophilus influenzae 22.1-21] gi|145274385|gb|EDK14249.1| 50S ribosomal protein L3 [Haemophilus influenzae 22.4-21] Length = 49 Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 1/50 (2%) Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 MAG +G RVTV++LEVV VD +R L+LVKG VPGA N ++V+ + K+ Sbjct: 1 MAGHLGAERVTVQSLEVVRVDAERKLLLVKGSVPGA-INGDVIVKPAVKA 49 >gi|195175671|ref|XP_002028552.1| GL21036 [Drosophila persimilis] gi|194104882|gb|EDW26925.1| GL21036 [Drosophila persimilis] Length = 712 Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 1/84 (1%) Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 ++ GF G +KRH + G+ A+HGV+ +HR G+ G + GRV+ KM G MG + Sbjct: 503 SVDHGFQGVVKRHGYMGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKMPGHMGNRWRVL 562 Query: 175 KNLEVVSVDDKRGLILVKG-CVPG 197 K L + K ++ V+G VPG Sbjct: 563 KGLRIWRTKAKYNVMWVQGSSVPG 586 >gi|145592242|ref|YP_001154244.1| 50S ribosomal protein L3P [Pyrobaculum arsenaticum DSM 13514] gi|212288408|sp|A4WMH5|RL3_PYRAR RecName: Full=50S ribosomal protein L3P gi|145284010|gb|ABP51592.1| LSU ribosomal protein L3P [Pyrobaculum arsenaticum DSM 13514] Length = 338 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 5/123 (4%) Query: 94 VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G SP F+ GQLVDV +T GKG+ G +KR L H HR G+ G Q Sbjct: 185 LGKTVSPKDVFSPGQLVDVIAVTKGKGWQGVVKRFGVTILPRWHKHRKGHRRTGTIGP-Q 243 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDSF 210 P +F + G+MG ++ T N ++ + + I K P G K +IL++ S Sbjct: 244 APALMFTQPR-PGQMGFHQRTEYNKRLLKIGENGAEITPKSGFPHYGVIKGPYILIQGSL 302 Query: 211 KSA 213 A Sbjct: 303 PGA 305 >gi|284162460|ref|YP_003401083.1| ribosomal protein L3 [Archaeoglobus profundus DSM 5631] gi|284012457|gb|ADB58410.1| ribosomal protein L3 [Archaeoglobus profundus DSM 5631] Length = 332 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 19/128 (14%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G +DV +T GKGF G +KR L A H S HR G+ G P RV Sbjct: 187 FQEGAFIDVIAITKGKGFQGPVKRWGVITLDAKHARSSKHRRVGTLGP-WTPHRVRWTVP 245 Query: 163 MAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCVPGAKKNSWIL 205 AG+MG ++ T N ++ + + + +LV G VPG K I Sbjct: 246 QAGQMGFHQRTEYNKRIIKIGENGEEITPEGGFVHYGVIRSDYVLVSGSVPGPVKRL-IR 304 Query: 206 VRDSFKSA 213 +RD+ + Sbjct: 305 MRDAIRPP 312 >gi|115675312|ref|XP_001202265.1| PREDICTED: similar to Mitochondrial ribosomal protein L3, partial [Strongylocentrotus purpuratus] gi|115711825|ref|XP_780771.2| PREDICTED: similar to Mitochondrial ribosomal protein L3, partial [Strongylocentrotus purpuratus] Length = 98 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 1/76 (1%) Query: 68 FFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRH 127 F SV + K+ + F V + L P G+ ++F G VD+ TI KGF G MKR Sbjct: 8 LFKSVCLPVKEHITSFNVTDNAALQP-GTPLYAAHFRPGMYVDIAAKTIDKGFQGVMKRW 66 Query: 128 NFGGLRATHGVSISHR 143 G A+HG + +HR Sbjct: 67 GMKGQPASHGATKTHR 82 >gi|115641910|ref|XP_001204299.1| PREDICTED: similar to Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3), partial [Strongylocentrotus purpuratus] gi|115660375|ref|XP_001200456.1| PREDICTED: similar to Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3), partial [Strongylocentrotus purpuratus] Length = 83 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 31/68 (45%), Positives = 40/68 (58%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 ++F G VD+ TI KGF G MKR G A+HG + +HR G +G DPGR++ Sbjct: 6 AHFRPGMYVDIAAKTIDKGFQGVMKRWGMKGQPASHGATKTHRKMGGSGGGGDPGRIWPG 65 Query: 161 KKMAGRMG 168 KKM G MG Sbjct: 66 KKMPGFMG 73 >gi|11499509|ref|NP_070750.1| 50S ribosomal protein L3P [Archaeoglobus fulgidus DSM 4304] gi|3914742|sp|O28354|RL3_ARCFU RecName: Full=50S ribosomal protein L3P gi|2648621|gb|AAB89331.1| LSU ribosomal protein L3P (rpl3P) [Archaeoglobus fulgidus DSM 4304] Length = 331 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 71/280 (25%), Positives = 103/280 (36%), Gaps = 77/280 (27%) Query: 3 SGVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGY------ 46 G K GMT V I+ R+ +PVTV+ +V R K Y Sbjct: 38 QGFAGYKAGMTHVVMIDDRKNSPTYGEEVVVPVTVIETPPMKVAAVRVYKKTQYGMQIAA 97 Query: 47 ----------------------------MAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKK 78 AV+ GA E +V ++P + V PKK Sbjct: 98 EVWSNNLDDFLDRRLNLPKKEPDVEKLKAAVENGASEVRVVTYTQPY--LITGV---PKK 152 Query: 79 --KLFEFRV------QKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNF 129 + E R+ D + +G S S F G ++DV +T GKGF G +KR Sbjct: 153 VPDVMEHRIGGNVEEALDYAISKLGKEISVSEVFDEGAIIDVIAVTKGKGFQGPVKRWGV 212 Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD----- 184 L A H S HR G+ G +P V AG+MG ++ T N ++ + + Sbjct: 213 ITLDAKHARSSKHRRVGNLGP-WNPHHVRWTVPQAGQMGFHQRTEYNKRLIKIGENGEEI 271 Query: 185 ------------KRGLILVKGCVPGAKKNSWILVRDSFKS 212 + +LV G VPG K I +RD+ + Sbjct: 272 TPKGGFLHYGVIRTQYVLVTGSVPGPVKRL-IRMRDAIRP 310 >gi|327311641|ref|YP_004338538.1| 50S ribosomal protein L3P [Thermoproteus uzoniensis 768-20] gi|326948120|gb|AEA13226.1| 50S ribosomal protein L3P [Thermoproteus uzoniensis 768-20] Length = 337 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 2/94 (2%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F+ GQLVDV +T GKG+ G +KR L H HR G+ G Q P +F + Sbjct: 196 FSAGQLVDVLAITRGKGWQGVIKRFGVKILPRWHKHRKGHRRTGTIGP-QSPALMFTQPR 254 Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP 196 G+MG ++ T N ++ + + I KG P Sbjct: 255 -PGQMGFHQRTEYNKRILKIGNNPAEINPKGGWP 287 >gi|14600545|ref|NP_147062.1| 50S ribosomal protein L3P [Aeropyrum pernix K1] gi|6685859|sp|Q9YFM2|RL3_AERPE RecName: Full=50S ribosomal protein L3P gi|5103618|dbj|BAA79139.1| 50S ribosomal protein L3P [Aeropyrum pernix K1] Length = 344 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 63/154 (40%), Gaps = 35/154 (22%) Query: 74 VSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLR 133 VS KLF++ +L+ V VF GQLVDV +T GKGF G +KR L Sbjct: 173 VSDVTKLFDYAKDVLGNLIAVNDVFE-----EGQLVDVIAVTKGKGFQGVIKRWGVKELP 227 Query: 134 ATH-----GVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD---- 184 H I RSHG + + P AG+ G +R T N ++ +DD Sbjct: 228 RWHKHRKGSRRIGARSHGRSTFWETP--------QAGQTGFHRRTEYNKRILMIDDDGYK 279 Query: 185 -------------KRGLILVKGCVPGAKKNSWIL 205 + +++ G +PG K ++ Sbjct: 280 VTPAGGFLRYGVVRSTFVMLSGSIPGTPKRPIVM 313 >gi|302774326|ref|XP_002970580.1| hypothetical protein SELMODRAFT_411279 [Selaginella moellendorffii] gi|300162096|gb|EFJ28710.1| hypothetical protein SELMODRAFT_411279 [Selaginella moellendorffii] Length = 115 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 6/58 (10%) Query: 5 VVARKLGMTC------VYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEA 56 ++AR+ G+ C V++ GRRIP+TVL D+ QVV +T+D + A+QVG +A Sbjct: 57 LMARRTGVKCGMTSTAVWDKWGRRIPITVLWADDNQVVQVKTVDHETFKALQVGCAQA 114 >gi|288931510|ref|YP_003435570.1| ribosomal protein L3 [Ferroglobus placidus DSM 10642] gi|288893758|gb|ADC65295.1| ribosomal protein L3 [Ferroglobus placidus DSM 10642] Length = 329 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 19/128 (14%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G +DV +T GKGF G +KR L A H S HR G+ G P RV Sbjct: 184 FKEGAFIDVLSITKGKGFQGPVKRWGVITLDAKHARSSKHRRVGTLGPWH-PHRVRWTVP 242 Query: 163 MAGRMGGNRVTVKNLEVVSV----DD-------------KRGLILVKGCVPGAKKNSWIL 205 AG+MG ++ T N ++ + +D + +LV G VPG+ K + Sbjct: 243 QAGQMGFHQRTEYNKRILKIGTNGEDINPEGGFLHYGLVRSDYVLVSGSVPGSVKRL-VR 301 Query: 206 VRDSFKSA 213 +RD+ + Sbjct: 302 MRDAIRPP 309 >gi|313233372|emb|CBY24487.1| unnamed protein product [Oikopleura dioica] Length = 303 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 7/114 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVV----VHRTLDKNGYMAVQVGAGEAK 57 R+G+V +K+G+ ++ +G R+ T+L + NC V+ H + G + V G G+ Sbjct: 165 RTGMVMKKIGVEPMWLRDGTRVVSTILQVQNCHVIKYFPKHEFNGRTGAVIVGAGTGKPF 224 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDV 111 +KN + + ++PK L F + ++ L P G+ +F VGQ VDV Sbjct: 225 LKNEN--YTQYCLDAGLTPKAHLARFPITENARLQP-GTPLHVQHFHVGQYVDV 275 >gi|124484910|ref|YP_001029526.1| 50S ribosomal protein L3P [Methanocorpusculum labreanum Z] gi|212288407|sp|A2SPK3|RL3_METLZ RecName: Full=50S ribosomal protein L3P gi|124362451|gb|ABN06259.1| LSU ribosomal protein L3P [Methanocorpusculum labreanum Z] Length = 333 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 18/117 (15%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S + GQ D+TG+T GKGF GA+KR + H + R G+ G P V Sbjct: 187 SLLSEGQFADITGITKGKGFQGAVKRFGITLRKRKHARTKKERHIGTLGP-WTPHHVRWQ 245 Query: 161 KKMAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCVPGAKK 200 M G+MG + T N ++ + + + +L+KG +PG K Sbjct: 246 VPMPGQMGFQQRTEFNKRIIKIGENADEINPAGGFLHYGLVRNNYVLIKGSIPGPAK 302 >gi|291533622|emb|CBL06735.1| hypothetical protein MHY_20500 [Megamonas hypermegale ART12/1] Length = 60 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 37/59 (62%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M ++ +KLGMT ++ EG+ +PVTV+ V+ +T++ +GY AVQ+G G K K Sbjct: 1 MAKVILGKKLGMTQIFTEEGKVVPVTVVESGKNVVLQSKTVETDGYNAVQIGFGTVKEK 59 >gi|327400872|ref|YP_004341711.1| 50S ribosomal protein L3 [Archaeoglobus veneficus SNP6] gi|327316380|gb|AEA46996.1| ribosomal protein L3 [Archaeoglobus veneficus SNP6] Length = 329 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 3/114 (2%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 ++ G ++DV +T GKGF G +KR L A H S HR G G +P + Sbjct: 184 YSEGAIIDVLSITKGKGFQGPVKRWGVITLDAKHARSSKHRRVGCLGP-WNPHHIRWTVP 242 Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDSFKSAV 214 AG+MG ++ T N ++ + + + G P G ++ ++L+ S +V Sbjct: 243 QAGQMGFHQRTEFNKRIIKIGEDGSEVTPNGGFPHYGVVRSDYVLISGSVPGSV 296 >gi|325958531|ref|YP_004289997.1| 50S ribosomal protein L3 [Methanobacterium sp. AL-21] gi|325329963|gb|ADZ09025.1| ribosomal protein L3 [Methanobacterium sp. AL-21] Length = 337 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 26/125 (20%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGV---SISHRSHGSTGCRQDPGRVFK 159 F+ G+ VD +T GKGF G +KR G+R +G S R GS G P R Sbjct: 190 FSDGEHVDTIAVTKGKGFQGPVKRF---GVRIQYGKAARSSKARHVGSIGP-WTPARTMW 245 Query: 160 NKKMAGRMGGNRVTVKNLEVVSVDD-------------------KRGLILVKGCVPGAKK 200 MAG+MG ++ T N +++ + D K G +++KG +PG K Sbjct: 246 TVAMAGQMGYHKRTEFNKKILRIADESQVDEVNPKGGFVKYGLIKNGYVMIKGSIPGPSK 305 Query: 201 NSWIL 205 IL Sbjct: 306 RLVIL 310 >gi|159040903|ref|YP_001540155.1| 50S ribosomal protein L3P [Caldivirga maquilingensis IC-167] gi|212288253|sp|A8MB75|RL3_CALMQ RecName: Full=50S ribosomal protein L3P gi|157919738|gb|ABW01165.1| ribosomal protein L3 [Caldivirga maquilingensis IC-167] Length = 347 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 20/115 (17%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F GQLVDV G+T GKG G +KR L H R G+ G + P ++ + Sbjct: 199 FKPGQLVDVIGVTKGKGTQGVIKRFGVKELPRWHKHRKGSRRTGTVGPK--PAVMYTQPR 256 Query: 163 MAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCVPGAKK 200 M G+MG +R T N ++ + D + G +L++G PG K Sbjct: 257 M-GQMGFHRRTEYNKRILKISDNGSEITPKGGFKHYGIVRSGYMLIEGSTPGVVK 310 >gi|29027489|gb|AAO61962.1| ribosomal protein L3 [Aster yellows phytoplasma] Length = 81 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 36/60 (60%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 + SG++ + +GMT +Y+ G +P +++ C V+ +T +K+GY + Q+G E K N Sbjct: 2 IMSGIIGKNIGMTSIYDESGFNVPCSIIEAGPCIVLQIKTKEKDGYNSCQLGFDEKKNTN 61 >gi|149928577|ref|ZP_01916799.1| ribosomal protein L3 [Limnobacter sp. MED105] gi|149822702|gb|EDM81967.1| ribosomal protein L3 [Limnobacter sp. MED105] Length = 60 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 36/57 (63%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57 M G++ RK+GM ++ G IPVTV+ + + +V +TL+++GY AVQ+ G + Sbjct: 1 MSLGLIGRKIGMMRIFTDAGVSIPVTVVDVSSNRVAQLKTLEQDGYTAVQLAYGSKR 57 >gi|146302876|ref|YP_001190192.1| 50S ribosomal protein L3P [Metallosphaera sedula DSM 5348] gi|172046889|sp|A4YCW6|RL3_METS5 RecName: Full=50S ribosomal protein L3P gi|145701126|gb|ABP94268.1| LSU ribosomal protein L3P [Metallosphaera sedula DSM 5348] Length = 341 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 7/110 (6%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNK 161 F GQL+D+ G+T G GF G +KR+ L H R G+ G P V Sbjct: 199 FKEGQLMDIIGVTKGHGFQGVIKRYGVQELPRWHKHRKGSRKVGTKGPSLGTPSYV---- 254 Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--PGAKKNSWILVRDS 209 G+MG +R T N ++ + D LI KG G KN+++LV+ S Sbjct: 255 PQPGQMGFHRRTEYNKRILKISDDTKLINPKGGFVRYGLVKNTYLLVQGS 304 >gi|159463060|ref|XP_001689760.1| predicted protein [Chlamydomonas reinhardtii] gi|158283748|gb|EDP09498.1| predicted protein [Chlamydomonas reinhardtii] Length = 264 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 16/84 (19%) Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 +G +G +KR + THG S SHR HGS G P RV+ KMAG+ Sbjct: 114 RGPAGTIKRWHHKRGAMTHG-SKSHREHGSIGSATTPSRVYPGLKMAGQ----------- 161 Query: 178 EVVSVDDKRGLILVKGCVPGAKKN 201 VD +R ++VKG VPG N Sbjct: 162 ----VDTERRALVVKGSVPGKVGN 181 >gi|304314253|ref|YP_003849400.1| 50S ribosomal protein L3P [Methanothermobacter marburgensis str. Marburg] gi|302587712|gb|ADL58087.1| 50S ribosomal protein L3P [Methanothermobacter marburgensis str. Marburg] Length = 337 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 27/133 (20%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGV---SISHRSHGSTGCRQDPGRVFK 159 F+ G VD +T GKGF G +KR G+R +G S R GS G P R Sbjct: 190 FSEGAFVDAIAVTKGKGFQGPVKRW---GIRIQYGKAARSSKGRHIGSLGP-WTPSRTMW 245 Query: 160 NKKMAGRMGGNRVTVKNLEVVSVDD--------------KRGL-----ILVKGCVPGAKK 200 AG+MG +R T N +++ + D + GL ++VKG VPG K Sbjct: 246 TVPQAGQMGYHRRTEYNKQILKIGDASEADQVNPSGGFVRYGLVRNDYVMVKGSVPGPTK 305 Query: 201 NSWILVRDSFKSA 213 +++R + ++A Sbjct: 306 R-LVVLRKAIRAA 317 >gi|261884192|ref|ZP_06008231.1| 50S ribosomal protein L3 [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 153 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 1/62 (1%) Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166 +++ V+ T G+GF G +KRH F A+HG S HR GS G + PGRV +KMAG Sbjct: 92 KVLKVSFNTKGRGFQGVIKRHGFLCGPASHG-SRFHRRPGSIGNCEWPGRVQPGRKMAGH 150 Query: 167 MG 168 G Sbjct: 151 YG 152 >gi|303244465|ref|ZP_07330800.1| ribosomal protein L3 [Methanothermococcus okinawensis IH1] gi|302485163|gb|EFL48092.1| ribosomal protein L3 [Methanothermococcus okinawensis IH1] Length = 333 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 40/115 (34%), Positives = 57/115 (49%), Gaps = 11/115 (9%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRH----NFGGLRATHGVSISHRSHGSTGCRQDPGRVF 158 FT G+ +D +T GKGF G +KR FG R GV R GS G P RV Sbjct: 188 FTDGEFIDTIAITKGKGFQGPVKRWGIKIQFGKHR-NKGVG---RHTGSIGP-WTPKRVM 242 Query: 159 KNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--PGAKKNSWILVRDSFK 211 MAG+MG ++ T N ++ + + I+ KG G KN+++LV+ S + Sbjct: 243 WTVPMAGQMGYHQRTEYNKRILKIGNNGEEIVPKGGFLHYGDVKNNYVLVKGSVQ 297 >gi|15678033|ref|NP_275147.1| 50S ribosomal protein L3P [Methanothermobacter thermautotrophicus str. Delta H] gi|3122720|sp|O26110|RL3_METTH RecName: Full=50S ribosomal protein L3P gi|2621048|gb|AAB84521.1| ribosomal protein L3 (E.coli ) [Methanothermobacter thermautotrophicus str. Delta H] Length = 337 Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 27/133 (20%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGV---SISHRSHGSTGCRQDPGRVFK 159 F+ G VD +T GKGF G +KR G+R +G S R GS G P R Sbjct: 190 FSEGAFVDAIAVTKGKGFQGPVKRW---GIRIQYGKAARSSKGRHIGSLGP-WTPSRTMW 245 Query: 160 NKKMAGRMGGNRVTVKNLEVVSVDD--------------KRGL-----ILVKGCVPGAKK 200 AG+MG +R T N +++ + D + GL +++KG VPG K Sbjct: 246 TVPQAGQMGYHRRTEYNKQILKIGDASEADLVNPDGGFVRYGLVRNDYVMIKGSVPGPTK 305 Query: 201 NSWILVRDSFKSA 213 +++R + ++A Sbjct: 306 R-LVVLRKAIRAA 317 >gi|167945157|ref|ZP_02532231.1| Ribosomal protein L3 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 61 Score = 44.3 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 23/54 (42%), Positives = 34/54 (62%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG 54 M GV+ RK+GMT V+ EG +PVTV+ + +V ++ D +GY A+QV G Sbjct: 1 MAIGVIGRKIGMTRVFTEEGASVPVTVIEVAPNRVSQLKSEDTDGYRAIQVTTG 54 >gi|330835825|ref|YP_004410553.1| 50S ribosomal protein L3P [Metallosphaera cuprina Ar-4] gi|329567964|gb|AEB96069.1| 50S ribosomal protein L3P [Metallosphaera cuprina Ar-4] Length = 341 Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 7/110 (6%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNK 161 F GQL+D+ G+T G GF G +KR+ L H R G+ G P V Sbjct: 199 FNEGQLIDILGVTTGYGFQGVIKRYGVQELPRWHKHRKGSRKVGTKGPSLGTPSYV---- 254 Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--PGAKKNSWILVRDS 209 G+MG +R T N ++ + D+ I KG G +N+++LV+ S Sbjct: 255 PQPGQMGYHRRTEYNKRILRISDEINQINPKGGFVRYGLVRNTYLLVQGS 304 >gi|288560108|ref|YP_003423594.1| ribosomal protein L3P Rpl3p [Methanobrevibacter ruminantium M1] gi|288542818|gb|ADC46702.1| ribosomal protein L3P Rpl3p [Methanobrevibacter ruminantium M1] Length = 336 Score = 43.9 bits (102), Expect = 0.017, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 53/125 (42%), Gaps = 26/125 (20%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISH---RSHGSTGCRQDPGRVFK 159 F+ GQ VD T GKG G +KR N +R +G ++ R GS G P R Sbjct: 189 FSEGQYVDAIATTKGKGVQGVVKRWN---IRIQYGKAMRSGKGRHVGSIGP-WSPERTMW 244 Query: 160 NKKMAGRMGGNRVTVKNLEVVSVDD-------------------KRGLILVKGCVPGAKK 200 AG+MG ++ T N +V+ + D K +LVKG VPG K Sbjct: 245 TVAQAGQMGYHKRTEFNKKVIKIGDVSEVDAVNPAGGFIRYGLVKNDYVLVKGSVPGPTK 304 Query: 201 NSWIL 205 IL Sbjct: 305 RLVIL 309 >gi|20089942|ref|NP_616017.1| 50S ribosomal protein L3P [Methanosarcina acetivorans C2A] gi|42559661|sp|Q8TRU7|RL3_METAC RecName: Full=50S ribosomal protein L3P gi|19914903|gb|AAM04497.1| ribosomal protein L3p [Methanosarcina acetivorans C2A] Length = 337 Score = 43.5 bits (101), Expect = 0.021, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 55/127 (43%), Gaps = 19/127 (14%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G LVD +TIGKG G +KR ++ H S R G+ G +P RV Sbjct: 193 FKNGTLVDTAAITIGKGTQGPVKRWGIQLMKGKHSRQGSLRQVGTLGAF-NPSRVSWRVP 251 Query: 163 MAGRMGGNRVTVKNLEVVSVDDK----------------RG-LILVKGCVPGAKKNSWIL 205 G+MG ++ T N ++ + RG IL+KG VPG K I Sbjct: 252 QMGQMGYHQRTEFNKRILKIGSDGEEVTPEGGFINYGLVRGDYILIKGSVPGPSKR-LIR 310 Query: 206 VRDSFKS 212 +RD ++ Sbjct: 311 LRDPIRA 317 >gi|301500876|ref|YP_003795288.1| ribosomal protein L3 [Chromera velia] gi|300069422|gb|ADJ66530.1| ribosomal protein L3 [Chromera velia] Length = 193 Score = 43.5 bits (101), Expect = 0.021, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 5/85 (5%) Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR--MGGNRVTVK 175 KGF G + R+ F THG S H + GS G PGRV KK+ GR + + Sbjct: 105 KGFLGVVARYKFTKGPKTHGSS-HHAAPGSIGAGTSPGRVLPGKKLPGRRPLAKRNYMIN 163 Query: 176 NLEVVSVDDKRGLILVKGCVPGAKK 200 ++SV + + V G +PG +K Sbjct: 164 TYRLLSVQQNK--VEVPGTLPGRRK 186 >gi|150401236|ref|YP_001325002.1| 50S ribosomal protein L3P [Methanococcus aeolicus Nankai-3] gi|166233154|sp|A6UV68|RL3_META3 RecName: Full=50S ribosomal protein L3P gi|150013939|gb|ABR56390.1| ribosomal protein L3 [Methanococcus aeolicus Nankai-3] Length = 333 Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 3/111 (2%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 FT G+ +D +T GKGF G +KR H R GS G P R+ Sbjct: 188 FTGGEFIDTVAITKGKGFQGPVKRWGIKIQFGKHQNKGVGRHTGSIGP-WTPKRIMWTVP 246 Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--PGAKKNSWILVRDSFK 211 MAG++G ++ T N ++ + + I+ KG G KN+++LV+ S + Sbjct: 247 MAGQVGFHQRTEYNKRILKIGENGSEIVPKGGFLNYGVVKNNYVLVKGSVQ 297 >gi|307595041|ref|YP_003901358.1| 50S ribosomal protein L3 [Vulcanisaeta distributa DSM 14429] gi|307550242|gb|ADN50307.1| ribosomal protein L3 [Vulcanisaeta distributa DSM 14429] Length = 342 Score = 43.1 bits (100), Expect = 0.025, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F+ GQ VDV +T GKG+ G +KR N L H +R G+ G Q+P F + Sbjct: 196 FSEGQYVDVAAITKGKGWQGVVKRFNVKILPKWHKHRKGYRRIGAIGP-QNPALTFTTPR 254 Query: 163 MAGRMGGNRVTVKNLEVVSV 182 G+MG ++ T N ++ + Sbjct: 255 -PGQMGLHKRTEYNKRILRI 273 >gi|148642822|ref|YP_001273335.1| 50S ribosomal protein L3P [Methanobrevibacter smithii ATCC 35061] gi|222445053|ref|ZP_03607568.1| hypothetical protein METSMIALI_00670 [Methanobrevibacter smithii DSM 2375] gi|261350378|ref|ZP_05975795.1| ribosomal protein L3 [Methanobrevibacter smithii DSM 2374] gi|166233159|sp|A5UL89|RL3_METS3 RecName: Full=50S ribosomal protein L3P gi|148551839|gb|ABQ86967.1| ribosomal protein L3p [Methanobrevibacter smithii ATCC 35061] gi|222434618|gb|EEE41783.1| hypothetical protein METSMIALI_00670 [Methanobrevibacter smithii DSM 2375] gi|288861161|gb|EFC93459.1| ribosomal protein L3 [Methanobrevibacter smithii DSM 2374] Length = 336 Score = 43.1 bits (100), Expect = 0.025, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 53/122 (43%), Gaps = 26/122 (21%) Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISH---RSHGSTGCRQDPGRVFKNKK 162 GQ VD T GKGF G +KR G+R +G ++ R GS G P R Sbjct: 192 GQFVDAIATTKGKGFQGVVKRW---GIRIQYGKAVRAGKGRHVGSIGP-WTPSRTMWTVA 247 Query: 163 MAGRMGGNRVTVKN---LEVVSVDD----------------KRGLILVKGCVPGAKKNSW 203 AG+MG ++ T N L++ S D+ K +LVKG +PG K Sbjct: 248 QAGQMGYHKRTEFNKKILKIASADEVDQINPDGGFVKYGLVKNDYVLVKGSLPGPSKRLV 307 Query: 204 IL 205 IL Sbjct: 308 IL 309 >gi|15920641|ref|NP_376310.1| 50S ribosomal protein L3P [Sulfolobus tokodaii str. 7] gi|42559677|sp|Q975I1|RL3_SULTO RecName: Full=50S ribosomal protein L3P gi|15621424|dbj|BAB65419.1| 343aa long hypothetical 50S ribosomal protein L3 [Sulfolobus tokodaii str. 7] Length = 343 Score = 43.1 bits (100), Expect = 0.025, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 7/114 (6%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR-QDPGRVFKNK 161 F GQL+D+ G+T GKGF G +KR+ L H R G+ G P V Sbjct: 201 FKEGQLIDIIGVTKGKGFQGVVKRYGVVELPRWHKHRKGSRKVGARGPSFSTPSYV---- 256 Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--PGAKKNSWILVRDSFKSA 213 G+MG +R T N ++ + D I KG G +N+++++ S A Sbjct: 257 PQPGQMGYHRRTEYNKRILKISDDPNEINPKGGFVNYGIVRNTYLIIEGSIIGA 310 >gi|1644227|dbj|BAA11007.1| ribosomal protein L3 [Bacillus subtilis] Length = 60 Score = 43.1 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 35/59 (59%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQLGFDDKREK 59 >gi|296109263|ref|YP_003616212.1| ribosomal protein L3 [Methanocaldococcus infernus ME] gi|295434077|gb|ADG13248.1| ribosomal protein L3 [Methanocaldococcus infernus ME] Length = 333 Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 21/120 (17%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH---------GSTGCRQD 153 F G+LVD G+T GKGF G +KR GV I R H GS G Q Sbjct: 188 FQEGELVDTIGVTKGKGFQGVVKR---------WGVKIQPRKHRRQGVGRHVGSIGPWQ- 237 Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDSFK 211 P + G+MG ++ T N ++ + + I +G P G KN++++++ S + Sbjct: 238 PKMIMWTVPRPGQMGYHQRTEYNKRILKIGNNGEEITPEGGFPHYGVIKNNYVILKGSVQ 297 >gi|119719148|ref|YP_919643.1| 50S ribosomal protein L3P [Thermofilum pendens Hrk 5] gi|119524268|gb|ABL77640.1| LSU ribosomal protein L3P [Thermofilum pendens Hrk 5] Length = 334 Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 21/118 (17%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G +DV +T GKGF G++KR + H H GS G Q P +F Sbjct: 188 FKEGDYIDVIAVTKGKGFQGSVKRFGVEEMPRWHKHRKGHSRIGSVGP-QKPAIMFYT-P 245 Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGL-------------------ILVKGCVPGAKKN 201 G++G ++ T N ++ V D L I+V+G VPGA K Sbjct: 246 FPGQLGFHQRTEYNKRILKVGDAESLKEINPPGGWPHYGLVRSQFIIVEGSVPGAVKR 303 >gi|255513436|gb|EET89702.1| ribosomal protein L3 [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 322 Score = 42.7 bits (99), Expect = 0.032, Method: Compositional matrix adjust. Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 29/153 (18%) Query: 68 FFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKR 126 + S+V ++ F+F Q VG P+ F G+ +DV +T GKG++G +KR Sbjct: 151 YESTVTGGNAEQRFDFAAQL------VGKEVKPADVFKGGEFIDVVSVTKGKGWAGVIKR 204 Query: 127 HNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV------ 180 H G R H + R G+ G PG++ G++G N T N ++ Sbjct: 205 H--GVRRLDHKATQKIRHIGALGAFT-PGKIMYTVPRPGQLGFNYRTEHNKRILVLGAAS 261 Query: 181 ---SVDDKRGL----------ILVKGCVPGAKK 200 V+ K G+ IL++G VPG K Sbjct: 262 DTEKVNIKSGIKNYGLVKSDYILIEGSVPGPAK 294 >gi|312137075|ref|YP_004004412.1| lsu ribosomal protein l3p [Methanothermus fervidus DSM 2088] gi|311224794|gb|ADP77650.1| LSU ribosomal protein L3P [Methanothermus fervidus DSM 2088] Length = 333 Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 54/131 (41%), Gaps = 21/131 (16%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F+ G+ VD +T GKGF G +KR A S R GS G P R Sbjct: 190 FSEGEYVDTIAVTKGKGFQGPVKRWGIKIQNAKTARSGKGRHIGSLGP-WTPSRTMWRVP 248 Query: 163 MAGRMGGNRVTVKNL---------EVVSVDDKRGLI----------LVKGCVPGAKKNSW 203 AG+ G +R T N EV ++ K G I LVKG VPG K Sbjct: 249 QAGQTGYHRRTEYNKMIMKIGTSDEVEKINPKGGFIRYGLVRNDYLLVKGSVPGPTKR-L 307 Query: 204 ILVRDSFKSAV 214 I++R + + V Sbjct: 308 IMLRKAIRPKV 318 >gi|302348734|ref|YP_003816372.1| 50S ribosomal protein L3P [Acidilobus saccharovorans 345-15] gi|302329146|gb|ADL19341.1| 50S ribosomal protein L3P [Acidilobus saccharovorans 345-15] Length = 329 Score = 42.4 bits (98), Expect = 0.042, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 58/145 (40%), Gaps = 35/145 (24%) Query: 78 KKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATH- 136 K F++ L VG VF P G +VDV +T GKGF G +KR L H Sbjct: 162 KAAFDYATSILGKTLSVGEVFQP-----GLMVDVIAVTKGKGFQGDVKRFGVKVLPRWHK 216 Query: 137 ----GVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD-------- 184 I RSHG + P G++G +R T N ++ + D Sbjct: 217 HRKKARGIGARSHGKGTWWEIPN--------PGQLGFHRRTEYNKRILDITDDWAAYTPA 268 Query: 185 ---------KRGLILVKGCVPGAKK 200 + L++++G +PGA K Sbjct: 269 GGFLHYGIPRSTLVVLEGTIPGAVK 293 >gi|229584895|ref|YP_002843397.1| 50S ribosomal protein L3P [Sulfolobus islandicus M.16.27] gi|259709736|sp|C3N5S7|RL3_SULIA RecName: Full=50S ribosomal protein L3P gi|228019945|gb|ACP55352.1| ribosomal protein L3 [Sulfolobus islandicus M.16.27] Length = 351 Score = 42.4 bits (98), Expect = 0.046, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 5/109 (4%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F GQL+DV G+T GKGF+G +KR++ L H R G+ G Sbjct: 209 FKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGPSLG---TPSYTP 265 Query: 163 MAGRMGGNRVTVKNLEVVSV-DDKRGLILVKGCV-PGAKKNSWILVRDS 209 G++G +R T N ++ + DD + + G V G +N++IL+ S Sbjct: 266 QPGQLGFHRRTEYNKRIIKIGDDPKEINPAGGFVRYGIVRNTYILLEGS 314 >gi|227827691|ref|YP_002829471.1| 50S ribosomal protein L3P [Sulfolobus islandicus M.14.25] gi|238619862|ref|YP_002914688.1| 50S ribosomal protein L3P [Sulfolobus islandicus M.16.4] gi|259709737|sp|C4KHF6|RL3_SULIK RecName: Full=50S ribosomal protein L3P gi|259709739|sp|C3MVH8|RL3_SULIM RecName: Full=50S ribosomal protein L3P gi|227459487|gb|ACP38173.1| ribosomal protein L3 [Sulfolobus islandicus M.14.25] gi|238380932|gb|ACR42020.1| ribosomal protein L3 [Sulfolobus islandicus M.16.4] gi|323474749|gb|ADX85355.1| ribosomal protein L3 [Sulfolobus islandicus REY15A] gi|323477477|gb|ADX82715.1| ribosomal protein L3 [Sulfolobus islandicus HVE10/4] Length = 351 Score = 42.4 bits (98), Expect = 0.046, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 5/109 (4%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F GQL+DV G+T GKGF+G +KR++ L H R G+ G Sbjct: 209 FKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGPSLG---TPSYTP 265 Query: 163 MAGRMGGNRVTVKNLEVVSV-DDKRGLILVKGCV-PGAKKNSWILVRDS 209 G++G +R T N ++ + DD + + G V G +N++IL+ S Sbjct: 266 QPGQLGFHRRTEYNKRIIKIGDDPKEINPAGGFVRYGIVRNTYILLEGS 314 >gi|325969277|ref|YP_004245469.1| 50S ribosomal protein L3P [Vulcanisaeta moutnovskia 768-28] gi|323708480|gb|ADY01967.1| 50S ribosomal protein L3P [Vulcanisaeta moutnovskia 768-28] Length = 342 Score = 42.4 bits (98), Expect = 0.047, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 2/80 (2%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F GQ VDV +T GKG G +KR N L H +R G+ G Q+P F + Sbjct: 196 FNEGQYVDVAAITKGKGLQGVVKRFNVKILPKWHKHRKGYRRIGAIGP-QNPALAFTTPR 254 Query: 163 MAGRMGGNRVTVKNLEVVSV 182 G+MG ++ T N ++ + Sbjct: 255 -PGQMGLHKRTEYNKRILKI 273 >gi|227830387|ref|YP_002832167.1| 50S ribosomal protein L3P [Sulfolobus islandicus L.S.2.15] gi|229579206|ref|YP_002837604.1| 50S ribosomal protein L3P [Sulfolobus islandicus Y.G.57.14] gi|229582042|ref|YP_002840441.1| 50S ribosomal protein L3P [Sulfolobus islandicus Y.N.15.51] gi|284997894|ref|YP_003419661.1| ribosomal protein L3 [Sulfolobus islandicus L.D.8.5] gi|259709738|sp|C3MQ59|RL3_SULIL RecName: Full=50S ribosomal protein L3P gi|259709740|sp|C3NHA9|RL3_SULIN RecName: Full=50S ribosomal protein L3P gi|259709741|sp|C3NEE3|RL3_SULIY RecName: Full=50S ribosomal protein L3P gi|227456835|gb|ACP35522.1| ribosomal protein L3 [Sulfolobus islandicus L.S.2.15] gi|228009920|gb|ACP45682.1| ribosomal protein L3 [Sulfolobus islandicus Y.G.57.14] gi|228012758|gb|ACP48519.1| ribosomal protein L3 [Sulfolobus islandicus Y.N.15.51] gi|284445789|gb|ADB87291.1| ribosomal protein L3 [Sulfolobus islandicus L.D.8.5] Length = 351 Score = 42.4 bits (98), Expect = 0.047, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 5/110 (4%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F GQL+DV G+T GKGF+G +KR++ L H R G+ G Sbjct: 209 FKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGPSLG---TPSYTP 265 Query: 163 MAGRMGGNRVTVKNLEVVSV-DDKRGLILVKGCV-PGAKKNSWILVRDSF 210 G++G +R T N ++ + DD + + G V G +N++IL+ S Sbjct: 266 QPGQLGFHRRTEYNKRIIKIGDDPKEINPAGGFVRYGIVRNTYILLEGSI 315 >gi|282164890|ref|YP_003357275.1| 50S ribosomal protein L3P [Methanocella paludicola SANAE] gi|282157204|dbj|BAI62292.1| 50S ribosomal protein L3P [Methanocella paludicola SANAE] Length = 341 Score = 42.4 bits (98), Expect = 0.049, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 19/122 (15%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ--------DP 154 F G+LVDV+ +T GKG G +KR G++I R H TG ++ +P Sbjct: 192 FVPGELVDVSAITKGKGTQGPVKR---------WGIAIQKRKHARTGKKRHVGNLGPWNP 242 Query: 155 GRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKG--CVPGAKKNSWILVRDSFKS 212 RV G+ G ++ T N ++ + +K + +G G +N +I+V+ S Sbjct: 243 HRVRWQVPQLGQTGYHQRTEYNKRIIKLGEKAEEVTPEGGFLHYGVLRNPYIVVKGSIPG 302 Query: 213 AV 214 V Sbjct: 303 PV 304 >gi|170291100|ref|YP_001737916.1| 50S ribosomal protein L3P [Candidatus Korarchaeum cryptofilum OPF8] gi|170175180|gb|ACB08233.1| ribosomal protein L3 [Candidatus Korarchaeum cryptofilum OPF8] Length = 332 Score = 42.4 bits (98), Expect = 0.051, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 24/133 (18%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F VGQLVDVT +T G G+ G ++R LR H GS G R P ++ Sbjct: 184 SVFKVGQLVDVTAVTKGHGWQGVVRRFGIELLR--HKAGKGRWRVGSLGSRHPPYVTWRV 241 Query: 161 KKMAGRMGGNRVTVKNLEVVSVDD--------------------KRGLILVKGCVPGAKK 200 + AG+ G ++ T N ++ + D + IL+ G VPG K Sbjct: 242 PR-AGQTGYHKRTEYNKRILMMGDLTKGDLDLSPKGGFKNYGILRSQYILLSGSVPGPAK 300 Query: 201 NSWILVRDSFKSA 213 ++ +R + + Sbjct: 301 R-FVFIRHPIRPS 312 >gi|298674802|ref|YP_003726552.1| 50S ribosomal protein L3 [Methanohalobium evestigatum Z-7303] gi|298287790|gb|ADI73756.1| ribosomal protein L3 [Methanohalobium evestigatum Z-7303] Length = 337 Score = 42.0 bits (97), Expect = 0.064, Method: Compositional matrix adjust. Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 24/156 (15%) Query: 78 KKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHG 137 K+ FE+ + + VF+P G +VD+ +T GKG G +KR + H Sbjct: 173 KEKFEYAKSILGTKISITDVFNP-----GGIVDIAAITTGKGTQGPVKRWGIQIAKHKHN 227 Query: 138 VSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK------------ 185 + S R G+ G P + G+MG ++ T N ++ V ++ Sbjct: 228 RAGSARQVGTLGPWH-PAHISWRVPQMGQMGYHQRTEYNKRIIKVSNEGSEINPDGGFLN 286 Query: 186 ----RG-LILVKGCVPGAKKNSWILVRDSFKSAVNC 216 RG +L+KG VPG K + RD +S V+ Sbjct: 287 YGLVRGNYVLIKGSVPGPSKR-LVRFRDPIRSKVSS 321 >gi|91772083|ref|YP_564775.1| 50S ribosomal protein L3P [Methanococcoides burtonii DSM 6242] gi|121689445|sp|Q12ZV1|RL3_METBU RecName: Full=50S ribosomal protein L3P gi|91711098|gb|ABE51025.1| LSU ribosomal protein L3P [Methanococcoides burtonii DSM 6242] Length = 337 Score = 42.0 bits (97), Expect = 0.066, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 19/134 (14%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G++VDV +T G G G +KR ++ H S R G+ G P V Sbjct: 193 FDNGKIVDVAAITTGHGTQGPVKRWGINLMKNKHSRQGSLRQVGTLGP-WTPAHVSWRVP 251 Query: 163 MAGRMGGNRVTVKNLEVV----SVDD-------------KRGLILVKGCVPGAKKNSWIL 205 AG+MG ++ T N ++ VD+ + IL+KG VPG K I Sbjct: 252 QAGQMGYHQRTDYNKRILKMSSDVDEVNPAGGFVNYGLVRGNYILIKGSVPGPSKR-LIR 310 Query: 206 VRDSFKSAVNCKGK 219 +R+ +S V+ G+ Sbjct: 311 LREPTRSKVSSIGE 324 >gi|20093853|ref|NP_613700.1| 50S ribosomal protein L3P [Methanopyrus kandleri AV19] gi|42559662|sp|Q8TY90|RL3_METKA RecName: Full=50S ribosomal protein L3P gi|19886782|gb|AAM01630.1| Ribosomal protein L3 [Methanopyrus kandleri AV19] Length = 361 Score = 42.0 bits (97), Expect = 0.066, Method: Compositional matrix adjust. Identities = 42/140 (30%), Positives = 60/140 (42%), Gaps = 37/140 (26%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH---------GSTGCRQD 153 F G++VDV+ +T GKGF G +KR GV+I R GS G Sbjct: 196 FDEGEIVDVSAITKGKGFQGVVKR---------WGVTIQDRKTQRKQKGRHIGSIGP-IT 245 Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD------KRG-----------LILVKGCVP 196 P RV MAG++G ++ T N ++ + + RG I++ G VP Sbjct: 246 PSRVRWTVPMAGQVGYHQRTEHNKRILKIGEDGEEVTPRGGFVNYGVVRGDYIMIHGTVP 305 Query: 197 GAKKNSWILVRDSFKSAVNC 216 G KK I VR + + N Sbjct: 306 GPKKRL-IRVRPAVRPPKNA 324 >gi|297619637|ref|YP_003707742.1| ribosomal protein L3 [Methanococcus voltae A3] gi|297378614|gb|ADI36769.1| ribosomal protein L3 [Methanococcus voltae A3] Length = 333 Score = 41.6 bits (96), Expect = 0.083, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 19/130 (14%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G+++D +T GKGF G++KR H R GS G + P RV + Sbjct: 188 FEAGEIIDTVAVTKGKGFQGSVKRWGIKIQFGKHQRKGVGRHTGSIGPWR-PRRVMWSVP 246 Query: 163 MAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCVPGAKKNSWIL 205 + G+MG ++ T N + + K G +LVKG V G K ++ Sbjct: 247 LPGQMGFHQRTEYNKRIFKIGAEGTEVTPKGGFLNYGVLKNGYVLVKGTVQGPAKRL-VM 305 Query: 206 VRDSFKSAVN 215 +R + ++ V+ Sbjct: 306 IRGAIRAPVD 315 >gi|124028157|ref|YP_001013477.1| 50S ribosomal protein L3P [Hyperthermus butylicus DSM 5456] gi|123978851|gb|ABM81132.1| 50S ribosomal protein L3P [Hyperthermus butylicus DSM 5456] Length = 319 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 48/127 (37%), Gaps = 32/127 (25%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGR------ 156 F GQ VDV +T GKGF G +KR L H HR G R PG Sbjct: 174 FREGQFVDVIAVTKGKGFQGVIKRFGVKELPRWH----KHRK----GSRSGPGTRGPATS 225 Query: 157 -VFKNKKMAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCVPGA 198 + G+MG +R T N ++ + D + IL+ G +PG Sbjct: 226 FSWSEVPQPGQMGFHRRTEYNKRILKIGDNGLEITPAGGFLHYGIVRSTYILLAGSIPGT 285 Query: 199 KKNSWIL 205 K +L Sbjct: 286 PKRPIVL 292 >gi|150399607|ref|YP_001323374.1| 50S ribosomal protein L3P [Methanococcus vannielii SB] gi|9910844|sp|Q9UWG2|RL3_METVA RecName: Full=50S ribosomal protein L3P gi|166233160|sp|A6UQJ0|RL3_METVS RecName: Full=50S ribosomal protein L3P gi|150012310|gb|ABR54762.1| ribosomal protein L3 [Methanococcus vannielii SB] Length = 334 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 3/111 (2%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G+ +D +T GKGF G +KR H R GS G + P RV Sbjct: 189 FETGEFIDTLAVTKGKGFQGPVKRWGVKIQFGKHQRKGVGRQTGSIGPWR-PKRVMWTVP 247 Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--PGAKKNSWILVRDSFK 211 +AG+MG ++ T N ++ + + I KG GA KN +++V+ + + Sbjct: 248 LAGQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGAVKNGYVVVKGTVQ 298 >gi|15897623|ref|NP_342228.1| 50S ribosomal protein L3P [Sulfolobus solfataricus P2] gi|284174948|ref|ZP_06388917.1| 50S ribosomal protein L3P [Sulfolobus solfataricus 98/2] gi|9910845|sp|Q9UXA8|RL3_SULSO RecName: Full=50S ribosomal protein L3P gi|6015757|emb|CAB57584.1| ribosomal protein L3 (HMAL3) [Sulfolobus solfataricus P2] gi|13813888|gb|AAK41018.1| LSU ribosomal protein L3AB (rpl3AB) [Sulfolobus solfataricus P2] gi|261602391|gb|ACX91994.1| ribosomal protein L3 [Sulfolobus solfataricus 98/2] Length = 351 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 21/128 (16%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F GQL+DV G+T GKGF+G +KR++ L H R G+ G Sbjct: 209 FKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGPSLG---TPSYTP 265 Query: 163 MAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCVPGAKKNSWIL 205 G++G +R T N ++ + D + +L++G + G+KK I Sbjct: 266 QPGQLGFHRRTEYNKRIIKIGDEPKEINPAGGFVRYGIVRNTYVLLEGSILGSKKRP-IF 324 Query: 206 VRDSFKSA 213 +R+ + + Sbjct: 325 LREPVRPS 332 >gi|293372119|ref|ZP_06618510.1| 50S ribosomal protein L3 domain protein [Bacteroides ovatus SD CMC 3f] gi|292632911|gb|EFF51498.1| 50S ribosomal protein L3 domain protein [Bacteroides ovatus SD CMC 3f] Length = 53 Score = 40.8 bits (94), Expect = 0.14, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 30/46 (65%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57 MT V++ +G+ +P TV+ C V +T++K+GY AVQ+G + K Sbjct: 1 MTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKK 46 >gi|15668348|ref|NP_247144.1| 50S ribosomal protein L3P [Methanocaldococcus jannaschii DSM 2661] gi|1710558|sp|P54014|RL3_METJA RecName: Full=50S ribosomal protein L3P gi|1590928|gb|AAB98161.1| LSU ribosomal protein L3P (rplC) [Methanocaldococcus jannaschii DSM 2661] Length = 335 Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 1/91 (1%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G+LVD G+T GKGF G +KR H R GS G Q P V + Sbjct: 190 FQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQ-PKMVMWSVP 248 Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKG 193 M G+MG ++ T N ++ + + I KG Sbjct: 249 MPGQMGYHQRTEYNKRILKIGNNGDEITPKG 279 >gi|118389862|ref|XP_001027976.1| ribosomal protein L3 containing protein [Tetrahymena thermophila] gi|3861468|emb|CAA10068.1| ribosomal protein L3 [Tetrahymena thermophila] gi|89309746|gb|EAS07734.1| ribosomal protein L3 containing protein [Tetrahymena thermophila SB210] Length = 391 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 55/137 (40%), Gaps = 37/137 (27%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVF 158 S F +++DV G+T GKGF+G +KR FG H +HR + GC P R+ Sbjct: 205 SIFAENEMLDVLGVTKGKGFAGVIKR--FG---VKHLQKKTHRGYRKVGCIGAWHPSRIR 259 Query: 159 KNKKMAGRMGGNRVTVKNLEVVSV---DD---------------------------KRGL 188 AG++G + T N +V V DD K Sbjct: 260 FTVPRAGQLGYHHRTETNKKVYRVGKGDDASNASTAGDVTDKAITPLGGFPHYGVVKNDF 319 Query: 189 ILVKGCVPGAKKNSWIL 205 I++KGC G KK L Sbjct: 320 IMIKGCCVGPKKRVLTL 336 >gi|289191591|ref|YP_003457532.1| ribosomal protein L3 [Methanocaldococcus sp. FS406-22] gi|288938041|gb|ADC68796.1| ribosomal protein L3 [Methanocaldococcus sp. FS406-22] Length = 335 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 1/91 (1%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G+LVD G+T GKGF G +KR H R GS G Q P V + Sbjct: 190 FQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQ-PKMVMWSVP 248 Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKG 193 M G+MG ++ T N ++ + + I KG Sbjct: 249 MPGQMGYHQRTEYNKRILKIGNNGDEITPKG 279 >gi|14520558|ref|NP_126033.1| 50S ribosomal protein L3P [Pyrococcus abyssi GE5] gi|9910846|sp|Q9V1T5|RL3_PYRAB RecName: Full=50S ribosomal protein L3P gi|5457774|emb|CAB49264.1| rpl3P LSU ribosomal protein L3P [Pyrococcus abyssi GE5] Length = 361 Score = 40.4 bits (93), Expect = 0.17, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 3/85 (3%) Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165 G+L+DV +T GKG G +KR LRA H S R GS G P RV MAG Sbjct: 213 GELLDVIAVTKGKGTQGPVKRWGI-KLRA-HKDSKGRRKVGSIGP-WHPARVMWTVPMAG 269 Query: 166 RMGGNRVTVKNLEVVSVDDKRGLIL 190 +MG + T N ++++ + L++ Sbjct: 270 QMGFHHRTELNKRLIAIGENGKLVI 294 >gi|332158024|ref|YP_004423303.1| 50S ribosomal protein L3P [Pyrococcus sp. NA2] gi|331033487|gb|AEC51299.1| 50S ribosomal protein L3P [Pyrococcus sp. NA2] Length = 362 Score = 40.4 bits (93), Expect = 0.18, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 3/85 (3%) Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165 G+L+DV +T GKG G +KR LRA H S R GS G P RV MAG Sbjct: 214 GELLDVIAVTKGKGTQGPVKRWGI-KLRA-HKDSKGRRKVGSIGP-WHPARVMWTVPMAG 270 Query: 166 RMGGNRVTVKNLEVVSVDDKRGLIL 190 +MG + T N ++++ + L++ Sbjct: 271 QMGFHHRTELNKRLIAIGENGKLVI 295 >gi|256810689|ref|YP_003128058.1| ribosomal protein L3 [Methanocaldococcus fervens AG86] gi|256793889|gb|ACV24558.1| ribosomal protein L3 [Methanocaldococcus fervens AG86] Length = 335 Score = 40.4 bits (93), Expect = 0.18, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 3/111 (2%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G+LVD G+T GKGF G +KR H R GS G Q P V Sbjct: 190 FQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQ-PKMVMWTVP 248 Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--PGAKKNSWILVRDSFK 211 M G+MG ++ T N ++ + + I KG G +N++++++ S + Sbjct: 249 MPGQMGYHQRTEYNKRILKIGNNGEEITPKGGFLHYGVIRNNYVVLKGSVQ 299 >gi|14591535|ref|NP_143617.1| 50S ribosomal protein L3P [Pyrococcus horikoshii OT3] gi|6094075|sp|O59418|RL3_PYRHO RecName: Full=50S ribosomal protein L3P gi|3258212|dbj|BAA30895.1| 362aa long hypothetical 50S ribosomal protein L3 [Pyrococcus horikoshii OT3] Length = 362 Score = 40.4 bits (93), Expect = 0.19, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 3/85 (3%) Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165 G+L+DV +T GKG G +KR LRA H S R GS G P RV MAG Sbjct: 214 GELLDVIAVTKGKGTQGPVKRWGI-KLRA-HKDSKGRRKVGSIGP-WHPARVMWTVPMAG 270 Query: 166 RMGGNRVTVKNLEVVSVDDKRGLIL 190 +MG + T N ++++ + L++ Sbjct: 271 QMGFHHRTELNKRLIAIGENGKLVI 295 >gi|159905511|ref|YP_001549173.1| 50S ribosomal protein L3P [Methanococcus maripaludis C6] gi|226730533|sp|A9A9B8|RL3_METM6 RecName: Full=50S ribosomal protein L3P gi|159887004|gb|ABX01941.1| ribosomal protein L3 [Methanococcus maripaludis C6] Length = 334 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 3/111 (2%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G+++D +T GKGF G++KR H R GS G + P RV Sbjct: 189 FEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGPWR-PRRVMWTVP 247 Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--PGAKKNSWILVRDSFK 211 + G+MG ++ T N ++ + + I KG GA KN +++V+ + + Sbjct: 248 LPGQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGAVKNGYVVVKGTVQ 298 >gi|134045079|ref|YP_001096565.1| 50S ribosomal protein L3P [Methanococcus maripaludis C5] gi|166233156|sp|A4FVY2|RL3_METM5 RecName: Full=50S ribosomal protein L3P gi|132662704|gb|ABO34350.1| LSU ribosomal protein L3P [Methanococcus maripaludis C5] Length = 334 Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 3/111 (2%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G+++D +T GKGF G++KR H R GS G + P RV Sbjct: 189 FEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGPWR-PRRVMWTVP 247 Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--PGAKKNSWILVRDSFK 211 + G+MG ++ T N ++ + + I KG GA KN +++V+ + + Sbjct: 248 LPGQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGAVKNGYVVVKGTVQ 298 >gi|150402715|ref|YP_001330009.1| 50S ribosomal protein L3P [Methanococcus maripaludis C7] gi|166233157|sp|A6VHD2|RL3_METM7 RecName: Full=50S ribosomal protein L3P gi|150033745|gb|ABR65858.1| ribosomal protein L3 [Methanococcus maripaludis C7] Length = 334 Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 3/111 (2%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G+++D +T GKGF G++KR H R GS G + P RV Sbjct: 189 FEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGPWR-PRRVMWTVP 247 Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--PGAKKNSWILVRDSFK 211 + G+MG ++ T N ++ + + I KG GA KN +++V+ + + Sbjct: 248 LPGQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGAVKNGYVVVKGTVQ 298 >gi|45359106|ref|NP_988663.1| 50S ribosomal protein L3P [Methanococcus maripaludis S2] gi|74553576|sp|Q6LX10|RL3_METMP RecName: Full=50S ribosomal protein L3P gi|45047981|emb|CAF31099.1| LSU Ribosomal protein L3P [Methanococcus maripaludis S2] Length = 334 Score = 40.0 bits (92), Expect = 0.22, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 3/111 (2%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G+++D +T GKGF G++KR H R GS G + P RV Sbjct: 189 FEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGPWR-PRRVMWTVP 247 Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--PGAKKNSWILVRDSFK 211 + G+MG ++ T N ++ + + I KG GA KN +++V+ + + Sbjct: 248 LPGQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGAVKNGYVVVKGTVQ 298 >gi|88603499|ref|YP_503677.1| 50S ribosomal protein L3P [Methanospirillum hungatei JF-1] gi|109893522|sp|Q2FU91|RL3_METHJ RecName: Full=50S ribosomal protein L3P gi|88188961|gb|ABD41958.1| LSU ribosomal protein L3P [Methanospirillum hungatei JF-1] Length = 337 Score = 40.0 bits (92), Expect = 0.22, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 48/117 (41%), Gaps = 18/117 (15%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F VGQ DVT +T GKG G +KR + H R G+ G P V Sbjct: 191 SLFKVGQYTDVTAITKGKGTQGPVKRWGVHLRKRKHSRGKKERHVGTLGP-WTPHHVRWQ 249 Query: 161 KKMAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCVPGAKK 200 M G+MG ++ T N ++ + + + +L+KG VPG K Sbjct: 250 VPMMGQMGYHQRTEFNKRLLKIGEDGAEITPEGGFINYGEVRARYVLIKGSVPGPSK 306 >gi|18978197|ref|NP_579554.1| 50S ribosomal protein L3P [Pyrococcus furiosus DSM 3638] gi|42559663|sp|Q8TZZ8|RL3_PYRFU RecName: Full=50S ribosomal protein L3P gi|18894006|gb|AAL81949.1| LSU ribosomal protein L3P [Pyrococcus furiosus DSM 3638] Length = 365 Score = 39.7 bits (91), Expect = 0.28, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 3/79 (3%) Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165 G+L+DV +T GKG G +KR LRA H S R GS G P RV MAG Sbjct: 216 GELLDVIAVTKGKGTQGPVKRWGI-KLRA-HKDSKGRRKVGSIGP-WHPARVMWTVPMAG 272 Query: 166 RMGGNRVTVKNLEVVSVDD 184 +MG + T N ++++ + Sbjct: 273 QMGFHHRTELNKRLIAIGE 291 >gi|261403779|ref|YP_003248003.1| ribosomal protein L3 [Methanocaldococcus vulcanius M7] gi|261370772|gb|ACX73521.1| ribosomal protein L3 [Methanocaldococcus vulcanius M7] Length = 335 Score = 39.7 bits (91), Expect = 0.29, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 3/111 (2%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G+L D G+T GKGF G +KR H R GS G Q P + Sbjct: 190 FQEGELADTIGITKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQ-PKMIMWTVP 248 Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--PGAKKNSWILVRDSFK 211 M G+MG ++ T N ++ + + I KG G KN++++++ S + Sbjct: 249 MPGQMGYHQRTEYNKRILKIGNNGEEITPKGGFLHYGVIKNNYVVLKGSVQ 299 >gi|322372168|ref|ZP_08046709.1| 50S ribosomal protein L3P [Haladaptatus paucihalophilus DX253] gi|320548177|gb|EFW89850.1| 50S ribosomal protein L3P [Haladaptatus paucihalophilus DX253] Length = 338 Score = 39.7 bits (91), Expect = 0.31, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 22/128 (17%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G+ +D +G+T GKG G +KR + H R G+ G +P RV Sbjct: 195 FRAGEYLDTSGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 253 Query: 163 MAGRMGGNRVTVKNLEVVSV-DDKRGLI---------------LVKGCVPGAKKNSWILV 206 G+ G ++ T N ++S+ DD + L+KG VPG K LV Sbjct: 254 QLGQTGYHQRTELNKRLISLGDDDEASVDGGFVNYGEVDGPYALIKGSVPGPNKR---LV 310 Query: 207 RDSFKSAV 214 R F+ AV Sbjct: 311 R--FRPAV 316 >gi|21228226|ref|NP_634148.1| 50S ribosomal protein L3P [Methanosarcina mazei Go1] gi|42559655|sp|Q8PV50|RL3_METMA RecName: Full=50S ribosomal protein L3P gi|20906682|gb|AAM31820.1| LSU ribosomal protein L3P [Methanosarcina mazei Go1] Length = 337 Score = 39.3 bits (90), Expect = 0.36, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 19/127 (14%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G +VD +TIGKG G +KR + H S R G+ G +P RV Sbjct: 193 FKNGTVVDTAAITIGKGTQGPVKRWGIQLQKGKHSRQGSLRQIGTLGSF-NPSRVSWRVP 251 Query: 163 MAGRMGGNRVTVKNLEVVSVDDK----------------RG-LILVKGCVPGAKKNSWIL 205 G+MG ++ T N ++ + RG +L+KG VPG K I Sbjct: 252 QMGQMGYHQRTEFNKRILKIGSDGEEVTPEGGFINYGLVRGDYVLIKGSVPGPSKR-LIR 310 Query: 206 VRDSFKS 212 +RD ++ Sbjct: 311 LRDPIRA 317 >gi|76803057|ref|YP_331152.1| 50S ribosomal protein L3P [Natronomonas pharaonis DSM 2160] gi|109893528|sp|Q3IMY8|RL3_NATPD RecName: Full=50S ribosomal protein L3P gi|76558922|emb|CAI50518.1| ribosomal protein L3 [Natronomonas pharaonis DSM 2160] Length = 336 Score = 39.3 bits (90), Expect = 0.40, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 53/127 (41%), Gaps = 21/127 (16%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G+ DV G+T GKG G +KR + H R G+ G +P RV Sbjct: 194 FRAGEYTDVAGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 252 Query: 163 MAGRMGGNRVTVKNLEVVSVDDKR-----GLI----------LVKGCVPGAKKNSWILVR 207 G+ G ++ T N ++ + D G + LVKG VPG K LVR Sbjct: 253 QQGQTGYHQRTELNKRLIDLGDDDVSPDGGFVNYGEVDGPYALVKGSVPGPDKR---LVR 309 Query: 208 DSFKSAV 214 F+ AV Sbjct: 310 --FRPAV 314 >gi|16082270|ref|NP_394728.1| 50S ribosomal protein L3P [Thermoplasma acidophilum DSM 1728] gi|42559694|sp|Q9HIQ9|RL3_THEAC RecName: Full=50S ribosomal protein L3P gi|10640617|emb|CAC12395.1| 50S ribosomal protein L3 related protein [Thermoplasma acidophilum] Length = 331 Score = 38.9 bits (89), Expect = 0.46, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 23/128 (17%) Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165 G+ VDV +T GKGF+G +KR G++ + HR T P V AG Sbjct: 189 GKFVDVVSITKGKGFTGHVKRF---GVKLLPRKNRKHRRMIGTLGPWHPDWVRNTVPQAG 245 Query: 166 RMGGNRVTVKNLEVVSVDDK--------RG-----------LILVKGCVPGAKKNSWILV 206 +MG + T+ N+ V+ +K RG +L+ G +PGA K I + Sbjct: 246 QMGFQQRTISNVRVIKYGNKEEVDSINVRGGFLHYGFVKNDYVLLFGSIPGASKR-LIKM 304 Query: 207 RDSFKSAV 214 RD + V Sbjct: 305 RDPARQKV 312 >gi|307564672|ref|ZP_07627202.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [Prevotella amnii CRIS 21A-A] gi|307346600|gb|EFN91907.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [Prevotella amnii CRIS 21A-A] Length = 485 Score = 38.9 bits (89), Expect = 0.55, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 7/97 (7%) Query: 121 SGAMKRHNFGGLRATHGVSIS-HRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 S A+ +H GGL T G+ + R H D + F+N + A +M + + K + Sbjct: 181 SHAIHQHRIGGLYFTGGIFTNLTRDH------LDYHKTFENYRNAKKMFFDSLPKKAFAI 234 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 + DDK G+I+V+ C K S + D + C Sbjct: 235 TNADDKNGMIMVQNCKANIKTYSIQRMADFRARIIEC 271 >gi|70606412|ref|YP_255282.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius DSM 639] gi|76363364|sp|Q4JB40|RL3_SULAC RecName: Full=50S ribosomal protein L3P gi|68567060|gb|AAY79989.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius DSM 639] Length = 342 Score = 38.9 bits (89), Expect = 0.56, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 7/110 (6%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR-QDPGRVFKNK 161 F GQL D+ G+T GKGF G +KR++ H R G+ G P V Sbjct: 200 FREGQLTDIIGVTKGKGFQGVIKRYSVVEFPRWHKHRKGSRKIGARGPSISTPSYV---- 255 Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--PGAKKNSWILVRDS 209 G++G +R T N ++ + D I G + G KN+++++ S Sbjct: 256 PQPGQLGFHRRTEYNKRIIKIGDNVNEINPAGGIVNYGLVKNTYLVIEGS 305 >gi|218884488|ref|YP_002428870.1| 50S ribosomal protein L3P [Desulfurococcus kamchatkensis 1221n] gi|218766104|gb|ACL11503.1| 50S ribosomal protein L3P [Desulfurococcus kamchatkensis 1221n] Length = 396 Score = 38.5 bits (88), Expect = 0.60, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 39/89 (43%), Gaps = 5/89 (5%) Query: 95 GSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP 154 G V + F GQ VDV G+T GKGF G +KR L H HR + P Sbjct: 243 GYVRASDVFMEGQFVDVIGVTKGKGFQGVVKRFGVKELPRWH----KHRKGSRKIGARSP 298 Query: 155 GR-VFKNKKMAGRMGGNRVTVKNLEVVSV 182 G AG+MG +R T N ++ + Sbjct: 299 GFGTMSEPPQAGQMGFHRRTEYNKRILKM 327 >gi|320101368|ref|YP_004176960.1| 50S ribosomal protein L3P [Desulfurococcus mucosus DSM 2162] gi|319753720|gb|ADV65478.1| LSU ribosomal protein L3P [Desulfurococcus mucosus DSM 2162] Length = 396 Score = 38.5 bits (88), Expect = 0.64, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 5/89 (5%) Query: 95 GSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP 154 G V + F GQ +DV G+T GKGF G +KR L H HR + P Sbjct: 243 GYVKAADVFMEGQFIDVIGVTKGKGFQGVVKRFGVKELPRWH----KHRKGSRKIGARSP 298 Query: 155 GR-VFKNKKMAGRMGGNRVTVKNLEVVSV 182 G AG+MG +R T N ++ + Sbjct: 299 GFGTMSEPPQAGQMGFHRRTEYNKRILRI 327 >gi|289579898|ref|YP_003478364.1| ribosomal protein L3 [Natrialba magadii ATCC 43099] gi|289529451|gb|ADD03802.1| ribosomal protein L3 [Natrialba magadii ATCC 43099] Length = 340 Score = 38.5 bits (88), Expect = 0.67, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 22/128 (17%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G+ VD +G+T GKG G +KR + H R G+ G +P RV Sbjct: 197 FRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 255 Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGL----------------ILVKGCVPGAKKNSWILV 206 G+ G ++ T N +V + D +L+KG +PG K LV Sbjct: 256 QQGQTGYHQRTELNKRLVDIGDGADATVDGGFVNYGEVDGPHVLIKGSLPGPNKR---LV 312 Query: 207 RDSFKSAV 214 R F+ A+ Sbjct: 313 R--FRPAI 318 >gi|291333648|gb|ADD93339.1| ribosomal protein L3 [uncultured archaeon MedDCM-OCT-S11-C441] Length = 348 Score = 38.5 bits (88), Expect = 0.74, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 3/82 (3%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 + VGQ VDV G+T GKG+ G++KR FG +H S R G+ G G V K + Sbjct: 205 YDVGQEVDVVGVTKGKGWQGSIKR--FGLKLLSHKNSKRRRQGGNMGDFGT-GYVRKTIR 261 Query: 163 MAGRMGGNRVTVKNLEVVSVDD 184 AG++G ++ T N +++ + + Sbjct: 262 QAGQVGYHKRTELNKKILRISN 283 >gi|15790632|ref|NP_280456.1| 50S ribosomal protein L3P [Halobacterium sp. NRC-1] gi|169236371|ref|YP_001689571.1| 50S ribosomal protein L3P [Halobacterium salinarum R1] gi|42559695|sp|Q9HPD4|RL3_HALSA RecName: Full=50S ribosomal protein L3P gi|226725182|sp|B0R656|RL3_HALS3 RecName: Full=50S ribosomal protein L3P gi|10581159|gb|AAG19936.1| 50S ribosomal protein L13P [Halobacterium sp. NRC-1] gi|167727437|emb|CAP14225.1| ribosomal protein L3 [Halobacterium salinarum R1] Length = 335 Score = 38.1 bits (87), Expect = 0.79, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 52/128 (40%), Gaps = 22/128 (17%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G+ D G+T GKG G +KR + H R G+ G +P RV Sbjct: 192 FRAGEFTDAAGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 250 Query: 163 MAGRMGGNRVTVKNLEVVSVDD----------------KRGLILVKGCVPGAKKNSWILV 206 G+ G ++ T N ++ ++D LVKG VPG ++ LV Sbjct: 251 QQGQTGYHQRTELNKRLIDINDGDEPTPDGGFPNYGEVDGPYTLVKGSVPGPEQR---LV 307 Query: 207 RDSFKSAV 214 R F+ AV Sbjct: 308 R--FRPAV 313 >gi|84489708|ref|YP_447940.1| 50S ribosomal protein L3P [Methanosphaera stadtmanae DSM 3091] gi|109893523|sp|Q2NFV6|RL3_METST RecName: Full=50S ribosomal protein L3P gi|84373027|gb|ABC57297.1| 50S ribosomal protein L3P [Methanosphaera stadtmanae DSM 3091] Length = 337 Score = 38.1 bits (87), Expect = 0.85, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 50/125 (40%), Gaps = 26/125 (20%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSIS---HRSHGSTGCRQDPGRVFK 159 F G+ D T GKG G +KR G+R +G + R GS G P R Sbjct: 190 FQEGEYTDAIATTKGKGVQGPVKRF---GVRIQYGKAARSGIERHVGSIGP-WTPNRTMW 245 Query: 160 NKKMAGRMGGNRVTVKNLEVVSVDD-------------------KRGLILVKGCVPGAKK 200 M G+MG ++ T N +++ + D K ILVKG +PG K Sbjct: 246 TVAMQGQMGYHKRTEYNKKLLKIGDESEVDLINPDGGFVKYGFVKNNYILVKGSLPGPSK 305 Query: 201 NSWIL 205 +L Sbjct: 306 RLVVL 310 >gi|53802756|ref|YP_115479.1| uracil-DNA glycosylase [Methylococcus capsulatus str. Bath] gi|53756517|gb|AAU90808.1| uracil-DNA glycosylase [Methylococcus capsulatus str. Bath] Length = 184 Score = 38.1 bits (87), Expect = 0.91, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 14/84 (16%) Query: 82 EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRH--NFGGLRATHGVS 139 E + + ++PVG + + + T GQL DV G KRH GG+R T + Sbjct: 95 ELDLLRPALIIPVGKLAASRFLTFGQLGDVVG-----------KRHRVELGGVR-TDLIP 142 Query: 140 ISHRSHGSTGCRQDPGRVFKNKKM 163 + H S ST R++PGR + + Sbjct: 143 LPHPSGASTWHRREPGRSLLEQAL 166 >gi|255098787|gb|ACU00734.1| 60S ribosomal protein L3 [Nosema bombycis] gi|326573816|gb|ADZ95674.1| 60S ribosomal protein L3 [Nosema bombycis] Length = 384 Score = 38.1 bits (87), Expect = 0.92, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 30/125 (24%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-------DPG 155 F V + +D G+T GKGF G +KR GV+I R G R+ P Sbjct: 205 FEVNENLDTIGVTKGKGFQGVVKR---------FGVTIQPRK-SRKGIRKVACIGAWHPS 254 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVK-----------GCVP--GAKKNS 202 RV AG+MG +R T N +V + + LI + G +P G+ KN Sbjct: 255 RVMTTVARAGQMGFHRRTETNKKVYMIGNGNELIKTEFDLTEKPITPLGGIPHYGSIKND 314 Query: 203 WILVR 207 +I+V+ Sbjct: 315 YIMVK 319 >gi|193083866|gb|ACF09547.1| ribosomal protein L3 [uncultured marine group II euryarchaeote KM3-85-F5] Length = 350 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 21/116 (18%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 + GQ VDV G+T GKG+ G++KR FG TH S R G+ G G V K + Sbjct: 207 YQAGQEVDVVGVTKGKGWQGSIKR--FGLKLLTHKNSKRRRQGGNMGDF-GTGYVRKTIR 263 Query: 163 MAGRMGGNRVTVKNLEVVSVDD------------------KRGLILVKGCVPGAKK 200 AG++G ++ T N ++ + + + ++V+G +PG K Sbjct: 264 QAGQVGYHKRTELNKRILRISNPDESEITPAGGFLNYGEVRNPYMIVQGSLPGPAK 319 >gi|126465913|ref|YP_001041022.1| 50S ribosomal protein L3P [Staphylothermus marinus F1] gi|212288413|sp|A3DNA4|RL3_STAMF RecName: Full=50S ribosomal protein L3P gi|126014736|gb|ABN70114.1| LSU ribosomal protein L3P [Staphylothermus marinus F1] Length = 395 Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 5/81 (6%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGR-VFKNK 161 F GQ +D+ G+T GKGF G +KR L H HR + PG Sbjct: 251 FREGQFIDIIGVTKGKGFQGVIKRFGVKELPRWH----KHRKGSRKIGSRSPGFGTMSET 306 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 G+MG +R T N ++ + Sbjct: 307 PQPGQMGFHRRTEYNKRIIKI 327 >gi|222480857|ref|YP_002567094.1| ribosomal protein L3 [Halorubrum lacusprofundi ATCC 49239] gi|222453759|gb|ACM58024.1| ribosomal protein L3 [Halorubrum lacusprofundi ATCC 49239] Length = 338 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 54/128 (42%), Gaps = 22/128 (17%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F GQ DV+G+T GKG G +KR + H R G+ G +P RV Sbjct: 195 FRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 253 Query: 163 MAGRMGGNRVTVKNLEVVSV---DDKR---GLI----------LVKGCVPGAKKNSWILV 206 G+ G ++ T N ++ DD G + L+KG +PG K L+ Sbjct: 254 QQGQTGYHQRTELNKRLIDFGEGDDASVDGGFVNYGEVDGEYALIKGSLPGPDKR---LI 310 Query: 207 RDSFKSAV 214 R F+ A+ Sbjct: 311 R--FRPAI 316 >gi|284165492|ref|YP_003403771.1| ribosomal protein L3 [Haloterrigena turkmenica DSM 5511] gi|284015147|gb|ADB61098.1| ribosomal protein L3 [Haloterrigena turkmenica DSM 5511] Length = 339 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 22/128 (17%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G+ VD +G+T GKG G +KR + H R G+ G +P RV Sbjct: 196 FRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 254 Query: 163 MAGRMGGNRVTVKNLEVVSVDD------KRGLI----------LVKGCVPGAKKNSWILV 206 G+ G ++ T N +V + D G + L+KG +PG ++ LV Sbjct: 255 QQGQTGYHQRTELNKRLVDIGDGADATVDGGFVNYGEVDGPHALIKGSLPGPQQR---LV 311 Query: 207 RDSFKSAV 214 R F+ A+ Sbjct: 312 R--FRPAI 317 >gi|282859042|ref|ZP_06268178.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [Prevotella bivia JCVIHMP010] gi|282588210|gb|EFB93379.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [Prevotella bivia JCVIHMP010] Length = 485 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 7/97 (7%) Query: 121 SGAMKRHNFGGLRATHGVSIS-HRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 S A+ +H GGL GV + R H D + F+N + A +M + ++ + Sbjct: 181 SHAIHQHRIGGLHFEGGVFTNLTRDH------LDYHKTFENYRNAKKMFFDSLSKNAFAI 234 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 + DDK G+I+V+ C K S + D + C Sbjct: 235 TNADDKNGMIMVQNCKANIKTYSMQRMADFRAKIIEC 271 >gi|300710375|ref|YP_003736189.1| 50S ribosomal protein L3P [Halalkalicoccus jeotgali B3] gi|299124058|gb|ADJ14397.1| 50S ribosomal protein L3P [Halalkalicoccus jeotgali B3] Length = 337 Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust. Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 17/114 (14%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G+ +DV+G+T GKG G +KR + H R G+ G +P RV Sbjct: 194 FRAGEYLDVSGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 252 Query: 163 MAGRMGGNRVTVKNLEVVSVDDKR------GLI----------LVKGCVPGAKK 200 G+ G ++ T N ++++ ++ GL+ L+KG +PG K Sbjct: 253 QQGQTGYHQRTELNKRLLALGEEDDVNPDGGLVNYGEVSGPYTLIKGSLPGPDK 306 >gi|41179042|ref|NP_958398.1| RNA polymerase beta subunit I [Chlamydomonas reinhardtii] gi|41017747|sp|Q8HTL6|RPOB1_CHLRE RecName: Full=DNA-directed RNA polymerase subunit beta N-terminal section; AltName: Full=PEP; AltName: Full=Plastid-encoded RNA polymerase subunit beta N-terminal section; Short=RNA polymerase subunit beta N-terminal section gi|24209933|gb|AAN41266.1| RNA polymerase beta' subunit [Chlamydomonas reinhardtii] gi|28269765|tpg|DAA00943.1| TPA_inf: RNA polymerase beta subunit I [Chlamydomonas reinhardtii] gi|213517423|gb|ACJ50129.1| RNA polymerase beta subunit I [Chlamydomonas reinhardtii] Length = 822 Score = 37.0 bits (84), Expect = 2.1, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 9/102 (8%) Query: 30 LDNCQVVVHRTLDKNG-YMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKD 88 LD+ + +R + +G + +Q+G G +++ + + S ++ P +K F FR K Sbjct: 496 LDDIDHLKNRRVRTSGELIQIQIGVGLVRLEKTIREKMTYASGLSSLPSQK-FAFRSSKQ 554 Query: 89 DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130 + PVG + + T+G L++ K F+GA+ R FG Sbjct: 555 RNQSPVGDAENATQLTIGNLINT------KPFNGAL-REFFG 589 >gi|15825944|pdb|1JJ2|B Chain B, Fully Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution gi|20150989|pdb|1KQS|B Chain B, The Haloarcula Marismortui 50s Complexed With A Pretranslocational Intermediate In Protein Synthesis gi|22218923|pdb|1K8A|D Chain D, Co-Crystal Structure Of Carbomycin A Bound To The 50s Ribosomal Subunit Of Haloarcula Marismortui gi|22218957|pdb|1K9M|D Chain D, Co-Crystal Structure Of Tylosin Bound To The 50s Ribosomal Subunit Of Haloarcula Marismortui gi|22219000|pdb|1KD1|D Chain D, Co-Crystal Structure Of Spiramycin Bound To The 50s Ribosomal Subunit Of Haloarcula Marismortui gi|22219327|pdb|1M1K|D Chain D, Co-Crystal Structure Of Azithromycin Bound To The 50s Ribosomal Subunit Of Haloarcula Marismortui gi|24159022|pdb|1M90|D Chain D, Co-Crystal Structure Of Cca-Phe-Caproic Acid-Biotin And Sparsomycin Bound To The 50s Ribosomal Subunit gi|34811119|pdb|1K73|D Chain D, Co-Crystal Structure Of Anisomycin Bound To The 50s Ribosomal Subunit gi|34811149|pdb|1KC8|D Chain D, Co-Crystal Structure Of Blasticidin S Bound To The 50s Ribosomal Subunit gi|34811188|pdb|1N8R|D Chain D, Structure Of Large Ribosomal Subunit In Complex With Virginiamycin M gi|34811218|pdb|1NJI|D Chain D, Structure Of Chloramphenicol Bound To The 50s Ribosomal Subunit gi|37927902|pdb|1Q7Y|D Chain D, Crystal Structure Of Ccdap-Puromycin Bound At The Peptidyl Transferase Center Of The 50s Ribosomal Subunit gi|37927937|pdb|1Q81|D Chain D, Crystal Structure Of Minihelix With 3' Puromycin Bound To A- Site Of The 50s Ribosomal Subunit. gi|37927973|pdb|1Q82|D Chain D, Crystal Structure Of Cc-Puromycin Bound To The A-Site Of The 50s Ribosomal Subunit gi|37928009|pdb|1Q86|D Chain D, Crystal Structure Of Cca-Phe-Cap-Biotin Bound Simultaneously At Half Occupancy To Both The A-Site And P- Site Of The The 50s Ribosomal Subunit. gi|39654674|pdb|1QVF|B Chain B, Structure Of A Deacylated Trna Minihelix Bound To The E Site Of The Large Ribosomal Subunit Of Haloarcula Marismortui gi|39654707|pdb|1QVG|B Chain B, Structure Of Cca Oligonucleotide Bound To The Trna Binding Sites Of The Large Ribosomal Subunit Of Haloarcula Marismortui gi|55670537|pdb|1W2B|B Chain B, Trigger Factor Ribosome Binding Domain In Complex With 50s gi|145580205|pdb|2OTL|B Chain B, Girodazole Bound To The Large Subunit Of Haloarcula Marismortui gi|228311913|pdb|3CXC|B Chain B, The Structure Of An Enhanced Oxazolidinone Inhibitor Bound To The 50s Ribosomal Subunit Of H. Marismortui gi|228312143|pdb|3G4S|B Chain B, Co-Crystal Structure Of Tiamulin Bound To The Large Ribosomal Subunit gi|228312199|pdb|3G6E|B Chain B, Co-Crystal Structure Of Homoharringtonine Bound To The Large Ribosomal Subunit gi|228312235|pdb|3G71|B Chain B, Co-Crystal Structure Of Bruceantin Bound To The Large Ribosomal Subunit Length = 337 Score = 37.0 bits (84), Expect = 2.1, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 51/128 (39%), Gaps = 22/128 (17%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G+ DV G+T GKG G +KR + H R G+ G +P RV Sbjct: 194 FRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 252 Query: 163 MAGRMGGNRVTVKNLEVVSVDD----------------KRGLILVKGCVPGAKKNSWILV 206 G+ G ++ T N ++ + + LVKG VPG K LV Sbjct: 253 QQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKR---LV 309 Query: 207 RDSFKSAV 214 R F+ AV Sbjct: 310 R--FRPAV 315 >gi|48477712|ref|YP_023418.1| 50S ribosomal protein L3P [Picrophilus torridus DSM 9790] gi|74567866|sp|Q6L1C7|RL3_PICTO RecName: Full=50S ribosomal protein L3P gi|48430360|gb|AAT43225.1| large subunit ribosomal protein L3P [Picrophilus torridus DSM 9790] Length = 329 Score = 37.0 bits (84), Expect = 2.1, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 4/93 (4%) Query: 94 VGSVFSPSYFT-VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +GS S S F+ G VDV +T GKGF G +KR G++ + HR T Sbjct: 174 LGSNISFSDFSKPGNFVDVIAVTKGKGFQGVVKRF---GVKLLPRKNRKHRRMIGTLGPW 230 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 P V AG++G ++ T+ N+ ++ D K Sbjct: 231 HPDWVRNTVPQAGQVGFHQRTIHNIRIIKFDTK 263 >gi|296242583|ref|YP_003650070.1| 50S ribosomal protein L3P [Thermosphaera aggregans DSM 11486] gi|296095167|gb|ADG91118.1| LSU ribosomal protein L3P [Thermosphaera aggregans DSM 11486] Length = 395 Score = 37.0 bits (84), Expect = 2.1, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 5/81 (6%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG-STGCRQDPGRVFKNK 161 FT GQ +DV G+T GKGF G +KR L H HR G R Sbjct: 251 FTEGQFIDVIGVTKGKGFQGVVKRFGVKVLPRWH----KHRKGARKIGSRSPAFGTMSEP 306 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G +R T N ++ + Sbjct: 307 PQAGQTGFHRRTDYNKRILRI 327 >gi|55378384|ref|YP_136234.1| 50S ribosomal protein L3P [Haloarcula marismortui ATCC 43049] gi|57015335|sp|P20279|RL3_HALMA RecName: Full=50S ribosomal protein L3P; AltName: Full=Hl1; AltName: Full=Hmal3 gi|50513471|pdb|1S72|B Chain B, Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution gi|66360785|pdb|1YHQ|B Chain B, Crystal Structure Of Azithromycin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui gi|66360818|pdb|1YI2|B Chain B, Crystal Structure Of Erythromycin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui gi|66360851|pdb|1YIJ|B Chain B, Crystal Structure Of Telithromycin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui gi|66360884|pdb|1YIT|B Chain B, Crystal Structure Of Virginiamycin M And S Bound To The 50s Ribosomal Subunit Of Haloarcula Marismortui gi|66360917|pdb|1YJ9|B Chain B, Crystal Structure Of The Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui Containing A Three Residue Deletion In L22 gi|66360950|pdb|1YJN|B Chain B, Crystal Structure Of Clindamycin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui gi|66360983|pdb|1YJW|B Chain B, Crystal Structure Of Quinupristin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui gi|83753127|pdb|1VQ4|B Chain B, The Structure Of The Transition State Analogue "daa" Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui gi|83753159|pdb|1VQ5|B Chain B, The Structure Of The Transition State Analogue "raa" Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui gi|83753191|pdb|1VQ6|B Chain B, The Structure Of C-Hpmn And Cca-Phe-Cap-Bio Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui gi|83753223|pdb|1VQ7|B Chain B, The Structure Of The Transition State Analogue "dca" Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui gi|83753254|pdb|1VQ8|B Chain B, The Structure Of Ccda-Phe-Cap-Bio And The Antibiotic Sparsomycin Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui gi|83753286|pdb|1VQ9|B Chain B, The Structure Of Cca-Phe-Cap-Bio And The Antibiotic Sparsomycin Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui gi|83753317|pdb|1VQK|B Chain B, The Structure Of Ccda-Phe-Cap-Bio Bound To The A Site Of The Ribosomal Subunit Of Haloarcula Marismortui gi|83753348|pdb|1VQL|B Chain B, The Structure Of The Transition State Analogue "dcsn" Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui gi|83753379|pdb|1VQM|B Chain B, The Structure Of The Transition State Analogue "dan" Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui gi|83753411|pdb|1VQN|B Chain B, The Structure Of Cc-Hpmn And Cca-Phe-Cap-Bio Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui gi|83753442|pdb|1VQO|B Chain B, The Structure Of Ccpmn Bound To The Large Ribosomal Subunit Haloarcula Marismortui gi|83753474|pdb|1VQP|B Chain B, The Structure Of The Transition State Analogue "rap" Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui gi|145580174|pdb|2OTJ|B Chain B, 13-Deoxytedanolide Bound To The Large Subunit Of Haloarcula Marismortui gi|171848838|pdb|2QA4|B Chain B, A More Complete Structure Of The The L7L12 STALK OF THE Haloarcula Marismortui 50s Large Ribosomal Subunit gi|188596003|pdb|3CC2|B Chain B, The Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution With Rrna Sequence For The 23s Rrna And Genome-Derived Sequences For R-Proteins gi|188596034|pdb|3CC4|B Chain B, Co-Crystal Structure Of Anisomycin Bound To The 50s Ribosomal Subunit gi|188596065|pdb|3CC7|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation C2487u gi|188596096|pdb|3CCE|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation U2535a gi|188596127|pdb|3CCJ|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation C2534u gi|188596158|pdb|3CCL|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation U2535c. Density For Anisomycin Is Visible But Not Included In Model. gi|188596189|pdb|3CCM|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2611u gi|188596220|pdb|3CCQ|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation A2488u gi|188596251|pdb|3CCR|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation A2488c. Density For Anisomycin Is Visible But Not Included In The Model. gi|188596282|pdb|3CCS|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2482a gi|188596313|pdb|3CCU|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2482c gi|188596344|pdb|3CCV|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2616a gi|188596375|pdb|3CD6|B Chain B, Co-Cystal Of Large Ribosomal Subunit Mutant G2616a With Cc- Puromycin gi|194368706|pdb|3CPW|B Chain B, The Structure Of The Antibiotic Linezolid Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui gi|206581909|pdb|3CMA|B Chain B, The Structure Of Cca And Cca-Phe-Cap-Bio Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui gi|206581942|pdb|3CME|B Chain B, The Structure Of Ca And Cca-Phe-Cap-Bio Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui gi|208435496|pdb|2QEX|B Chain B, Negamycin Binds To The Wall Of The Nascent Chain Exit Tunnel Of The 50s Ribosomal Subunit gi|290790037|pdb|3I55|B Chain B, Co-Crystal Structure Of Mycalamide A Bound To The Large Ribosomal Subunit gi|290790068|pdb|3I56|B Chain B, Co-Crystal Structure Of Triacetyloleandomcyin Bound To The Large Ribosomal Subunit gi|55231109|gb|AAV46528.1| 50S ribosomal protein L3 [Haloarcula marismortui ATCC 43049] Length = 338 Score = 37.0 bits (84), Expect = 2.2, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 51/128 (39%), Gaps = 22/128 (17%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G+ DV G+T GKG G +KR + H R G+ G +P RV Sbjct: 195 FRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 253 Query: 163 MAGRMGGNRVTVKNLEVVSVDD----------------KRGLILVKGCVPGAKKNSWILV 206 G+ G ++ T N ++ + + LVKG VPG K LV Sbjct: 254 QQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKR---LV 310 Query: 207 RDSFKSAV 214 R F+ AV Sbjct: 311 R--FRPAV 316 >gi|207109616|ref|ZP_03243778.1| 50S ribosomal protein L3 [Helicobacter pylori HPKX_438_CA4C1] Length = 116 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 29/134 (21%) Query: 6 VARKLGMTCVYNIEGRRIPVTVL--------HLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57 + +K+GM+ I+ PVT+L L+N + +V + K A++ G+ K Sbjct: 4 LVQKIGMS--RTIDANSTPVTLLKVLQAKVCQLENGKALVAYAMHKKHNKAIE---GQQK 58 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 +SK F+++ S +K+L + + + L V + F T G Sbjct: 59 KYQLSKEF-NHFATLKASQQKELGDLDLSALETLKRVKASFK---------------TKG 102 Query: 118 KGFSGAMKRHNFGG 131 +GF+G MKR NF G Sbjct: 103 RGFAGVMKRWNFQG 116 >gi|330508498|ref|YP_004384926.1| 50S ribosomal protein L3 [Methanosaeta concilii GP-6] gi|328929306|gb|AEB69108.1| ribosomal protein L3 [Methanosaeta concilii GP-6] Length = 334 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 24/133 (18%) Query: 92 LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTG-- 149 +P+ SVF +G L+D + +T GKG G ++R G++++ R H TG Sbjct: 183 VPISSVFE-----LGDLMDTSAVTKGKGTQGPVRR---------WGIAMAKRKHARTGKV 228 Query: 150 ------CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKN 201 P + G+MG ++ T N ++ + I G P G KN Sbjct: 229 RHVGNLGPWHPAHISWRVPQLGQMGYHQRTEYNKRLMFIGTDGSKITPDGGFPGYGVIKN 288 Query: 202 SWILVRDSFKSAV 214 +IL++ S + Sbjct: 289 QYILIKGSVPGPI 301 >gi|154150075|ref|YP_001403693.1| 50S ribosomal protein L3P [Candidatus Methanoregula boonei 6A8] gi|166233155|sp|A7I5N9|RL3_METB6 RecName: Full=50S ribosomal protein L3P gi|153998627|gb|ABS55050.1| ribosomal protein L3 [Methanoregula boonei 6A8] Length = 337 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 18/113 (15%) Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G D+T +TIGKG G +KR + H V R G+ G +P V + Sbjct: 195 TGAYADITAITIGKGTQGPVKRWGVTLRKRKHSVGGKERHVGTLGP-WNPHHVRWEVPQS 253 Query: 165 GRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCVPGAKK 200 G+MG + T N ++ + + + +++KG +PG K Sbjct: 254 GQMGYQQRTEFNKRILKIGENGAEITPAGGFLNYGVIRNAYVVIKGSIPGPAK 306 >gi|315425680|dbj|BAJ47337.1| large subunit ribosomal protein L3 [Candidatus Caldiarchaeum subterraneum] gi|315427562|dbj|BAJ49161.1| large subunit ribosomal protein L3 [Candidatus Caldiarchaeum subterraneum] Length = 320 Score = 36.6 bits (83), Expect = 2.8, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 15/88 (17%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTG------CRQDPGR 156 F GQ VDV +T GKGF G +KR +GVSI R T +P Sbjct: 184 FKEGQFVDVIAVTKGKGFQGVVKR---------YGVSILQRKSRKTRRGVAAIGPWNPHY 234 Query: 157 VFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 V +G+MG +R T N ++ + D Sbjct: 235 VMYTVPRSGQMGYHRRTEFNKRILRIGD 262 >gi|315425735|dbj|BAJ47391.1| large subunit ribosomal protein L3 [Candidatus Caldiarchaeum subterraneum] Length = 289 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 15/88 (17%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTG------CRQDPGR 156 F GQ VDV +T GKGF G +KR +GVSI R T +P Sbjct: 184 FKEGQFVDVIAVTKGKGFQGVVKR---------YGVSILQRKSRKTRRGVAAIGPWNPHY 234 Query: 157 VFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 V +G+MG +R T N ++ + D Sbjct: 235 VMYTVPRSGQMGYHRRTEFNKRILRIGD 262 >gi|294496017|ref|YP_003542510.1| 50S ribosomal protein L3P [Methanohalophilus mahii DSM 5219] gi|292667016|gb|ADE36865.1| LSU ribosomal protein L3P [Methanohalophilus mahii DSM 5219] Length = 337 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 18/115 (15%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F+ G ++DV +T G G G +KR + H S R G+ G P ++ + Sbjct: 193 FSEGNIIDVAAITRGYGTEGPVKRWGIQLAKNKHSRQSSLRQVGTLGPWNPPHVSWRVPQ 252 Query: 163 MAGRMGGNRVTVKNLEVVSVDD------------KRGL-----ILVKGCVPGAKK 200 M G+ G ++ T N ++ V GL ILVKG VPG K Sbjct: 253 M-GQAGYHQRTEYNKRILKVSSDVDEVNPAGGFVNYGLVGGDYILVKGTVPGPSK 306 >gi|307354323|ref|YP_003895374.1| 50S ribosomal protein L3 [Methanoplanus petrolearius DSM 11571] gi|307157556|gb|ADN36936.1| ribosomal protein L3 [Methanoplanus petrolearius DSM 11571] Length = 337 Score = 36.2 bits (82), Expect = 3.2, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 18/113 (15%) Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 GQ +DVT +T GKG GA+KR + H R G+ G P V Sbjct: 195 AGQYIDVTAVTTGKGTQGAVKRWGIQVRKRKHSRGKKKRHIGNLGP-WTPHHVRWQVPQM 253 Query: 165 GRMGGNRVTVKNLEVVSVDDK----------------RG-LILVKGCVPGAKK 200 G+MG + T N ++ + + RG +L+KG +PG K Sbjct: 254 GQMGYQQRTEFNKRILRIGNNPEEINPDGGFLHYGLVRGKYVLIKGSIPGPTK 306 >gi|2425176|dbj|BAA22270.1| ribosomal protein L3 [Halobacterium salinarum] Length = 330 Score = 36.2 bits (82), Expect = 3.4, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 18/114 (15%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G+ D G+T GKG G +KR + H ++ R G+ G +P RV Sbjct: 188 FRAGEFADAAGITKGKGTQGPVKRWGVQKRKGKHARHVARRI-GNLGP-WNPSRVRSTVP 245 Query: 163 MAGRMGGNRVTVKNLEVVSVDD----------------KRGLILVKGCVPGAKK 200 G+ G ++ T N ++ ++D LVKG VPG ++ Sbjct: 246 QQGQTGYHQRTELNKRLIDINDGDEPSPDGGFPNYGEVDGPYTLVKGSVPGPEQ 299 >gi|289597193|ref|YP_003483889.1| ribosomal protein L3 [Aciduliprofundum boonei T469] gi|289534980|gb|ADD09327.1| ribosomal protein L3 [Aciduliprofundum boonei T469] Length = 340 Score = 36.2 bits (82), Expect = 3.5, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 14/115 (12%) Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165 G+ VDV +T GKGF G +KR G++ + + HR T P V AG Sbjct: 191 GKFVDVIAITKGKGFQGHVKRF---GVKLLNQKNRKHRRMIGTLGPWHPDWVRYTVPQAG 247 Query: 166 RMGGNRVTVKNLEVVSVDD-------KRGLILV--KGCVP--GAKKNSWILVRDS 209 +MG ++ T N +V D KR I + KG P G KN+++L+ S Sbjct: 248 QMGYHQRTEYNKRIVKYVDFIEENGEKRLAIDITPKGGFPHYGEVKNAYVLIHGS 302 >gi|322374619|ref|ZP_08049133.1| beta-galactosidase [Streptococcus sp. C300] gi|321280119|gb|EFX57158.1| beta-galactosidase [Streptococcus sp. C300] Length = 645 Score = 35.8 bits (81), Expect = 4.1, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 4/83 (4%) Query: 93 PVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF---GGLRATHGVSISHRSHGSTG 149 P V + GQLVDVT T G + + F G HGVSI H +G+ G Sbjct: 451 PQLYVLKTKVYKEGQLVDVTEDTFGYRYFNWTAKEGFSLNGERMKFHGVSI-HHDNGALG 509 Query: 150 CRQDPGRVFKNKKMAGRMGGNRV 172 ++ ++ K+ MG N + Sbjct: 510 AEENYKATYRKLKLLKDMGVNSI 532 >gi|147919334|ref|YP_686930.1| 50S ribosomal protein L3P [uncultured methanogenic archaeon RC-I] gi|121685298|sp|Q0W1Y9|RL3_UNCMA RecName: Full=50S ribosomal protein L3P gi|110622326|emb|CAJ37604.1| 50S ribosomal protein L3P [uncultured methanogenic archaeon RC-I] Length = 337 Score = 35.8 bits (81), Expect = 4.4, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 8/138 (5%) Query: 79 KLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGV 138 K FEF + + VF+P G+LVDV+ +T G G G + R + H Sbjct: 174 KRFEFAKSLMGKAVGIKDVFAP-----GELVDVSAITKGYGTQGPVVRWGIATQKRKHAR 228 Query: 139 SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCV--P 196 + R G+ G +P R+ G+ G ++ T N ++ + DK I G Sbjct: 229 TGKKRHVGNLGP-WNPHRIRWQVPQLGQTGYHQRTEYNKRILKMGDKAEEITPAGGFLHY 287 Query: 197 GAKKNSWILVRDSFKSAV 214 G +N +I+++ S V Sbjct: 288 GLIRNDYIMLKGSIPGPV 305 >gi|170516812|gb|ACB15214.1| ribosomal protein L3 [uncultured marine group II euryarchaeote DeepAnt-15E7] Length = 358 Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 3/90 (3%) Query: 95 GSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP 154 G++ + GQ +DV G+T GKG+ GA+KR L +H S R G+ G Sbjct: 207 GAITLDDVYETGQEIDVVGVTKGKGWQGAIKRWGIKLL--SHKNSKRRRQGGNMGDFGT- 263 Query: 155 GRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 G V K + AG++G + T N ++ V + Sbjct: 264 GYVRKTIRQAGQVGYHNRTELNKRILRVSN 293 >gi|303388761|ref|XP_003072614.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506] gi|303301755|gb|ADM11254.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506] Length = 383 Score = 35.4 bits (80), Expect = 5.4, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 8/103 (7%) Query: 82 EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSIS 141 E+ +++ + + + VF + + +DV G+T GKGF G +KR FG + Sbjct: 189 EWALERLEKEIQIAEVFGEN-----ENIDVIGVTKGKGFQGTVKR--FGVRKQPRKSRKG 241 Query: 142 HRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 R G P RV + AG+MG +R T KN V + + Sbjct: 242 IRKVACIGA-WHPSRVMYSVARAGQMGFHRRTEKNKRVYMIGN 283 >gi|19173079|ref|NP_597630.1| 60S RIBOSOMAL PROTEIN L3 [Encephalitozoon cuniculi GB-M1] gi|85014317|ref|XP_955654.1| 60S ribosomal protein L3 [Encephalitozoon cuniculi GB-M1] gi|51701710|sp|Q8SQI3|RL3_ENCCU RecName: Full=60S ribosomal protein L3 gi|19168746|emb|CAD26265.1| 60S RIBOSOMAL PROTEIN L3 [Encephalitozoon cuniculi GB-M1] gi|19171348|emb|CAD27073.1| 60S RIBOSOMAL PROTEIN L3 [Encephalitozoon cuniculi GB-M1] Length = 383 Score = 35.4 bits (80), Expect = 5.5, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 8/103 (7%) Query: 82 EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSIS 141 E+ + + + + +G VF V + +D G+T GKGF G +KR FG + Sbjct: 189 EWALGRLEKEIAIGEVFG-----VNENIDTIGVTKGKGFQGTVKR--FGVRKQPRKSRKG 241 Query: 142 HRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 R G P RV + AG+MG +R T KN V + + Sbjct: 242 IRKVACIGA-WHPSRVMYSIARAGQMGFHRRTEKNKRVYMIGN 283 >gi|303390711|ref|XP_003073586.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506] gi|303302733|gb|ADM12226.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506] Length = 383 Score = 35.4 bits (80), Expect = 5.6, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 8/103 (7%) Query: 82 EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSIS 141 E+ +++ + + + VF + + +DV G+T GKGF G +KR FG + Sbjct: 189 EWALERLEKEIQIAEVFGEN-----ENIDVIGVTKGKGFQGTVKR--FGVRKQPRKSRKG 241 Query: 142 HRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 R G P RV + AG+MG +R T KN V + + Sbjct: 242 IRKVACIGA-WHPSRVMYSVARAGQMGFHRRTEKNKRVYMIGN 283 >gi|300121321|emb|CBK21701.2| unnamed protein product [Blastocystis hominis] gi|300123206|emb|CBK24479.2| unnamed protein product [Blastocystis hominis] gi|300176312|emb|CBK23623.2| unnamed protein product [Blastocystis hominis] gi|300176758|emb|CBK25327.2| unnamed protein product [Blastocystis hominis] Length = 387 Score = 35.4 bits (80), Expect = 5.6, Method: Compositional matrix adjust. Identities = 51/195 (26%), Positives = 74/195 (37%), Gaps = 38/195 (19%) Query: 30 LDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD 89 +D CQVV R L +++G +A + + + G V+ K L E V+ Sbjct: 154 VDYCQVV--RVLAHTQIQKLKIGQKKAHLMEIQ--VNGGNMEEKVAFAKSLLEKEVK--- 206 Query: 90 DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTG 149 V VF PS +++D G+T GKGF G R +G R +HR Sbjct: 207 ----VSDVFEPS-----EMIDTIGVTKGKGFEGVTTR--WGTTRLPRK---THRGLRKVA 252 Query: 150 C--RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-------------DDKRGLILVKGC 194 C P RV AG+ G + T N ++ + D I G Sbjct: 253 CIGAWHPSRVHFTVPRAGQNGYHHRTDVNKKIYRIGAAGDAKSASTEADLTEKSITPMGG 312 Query: 195 VP--GAKKNSWILVR 207 P G N WI+V+ Sbjct: 313 FPHYGEVNNDWIMVK 327 >gi|257076559|ref|ZP_05570920.1| 50S ribosomal protein L3P [Ferroplasma acidarmanus fer1] Length = 319 Score = 35.4 bits (80), Expect = 5.7, Method: Compositional matrix adjust. Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 23/140 (16%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + + G VDV +T GKGF G +KR G++ + HR T P V Sbjct: 172 DFNSTGSFVDVISVTKGKGFQGVVKRF---GVKLLPRSNRKHRRMIGTLGPWHPDWVRNT 228 Query: 161 KKMAGRMGGNRVTVKNLEVV------SVDD--------KRGL-----ILVKGCVPGAKKN 201 AG++G ++ T+ N+ ++ VD+ K GL IL+ G + G K Sbjct: 229 VPQAGQVGLHQRTIHNIRIMKTATKEQVDEINVKGGFLKYGLVRNDYILLYGSISGPSKR 288 Query: 202 SWILVRDSFKSAVNCKGKVS 221 I +RD + AV KV Sbjct: 289 -LIKMRDPARQAVPNTDKVD 307 >gi|330805639|ref|XP_003290787.1| 60S ribosomal protein L3 [Dictyostelium purpureum] gi|325079065|gb|EGC32684.1| 60S ribosomal protein L3 [Dictyostelium purpureum] Length = 399 Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 63/155 (40%), Gaps = 37/155 (23%) Query: 83 FRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKR--------HNFGGLRA 134 F V + + V VFS + +++DV G+T GKGF+G +KR GLR Sbjct: 197 FAVANFEKTVSVSGVFSEN-----EMIDVIGVTKGKGFNGVIKRWGVRKLPRKTHKGLRK 251 Query: 135 THGVSISHRSHGST-----GCRQDPGRVFKNKKM-----AGRMGGNRVTVKNLEVVSVDD 184 + H S ST G RV +NKK+ A + G +++ E + Sbjct: 252 VACIGAWHPSRVSTTVPRAGQLGYHHRVERNKKIYRIGQAQPVEGKQISTGKTEFDLTEK 311 Query: 185 K--------------RGLILVKGCVPGAKKNSWIL 205 + I+VKGCV G +K + L Sbjct: 312 TINPMGGFTHYGVVDQDFIMVKGCVAGPRKRALTL 346 >gi|14278035|pdb|1GIY|E Chain E, Crystal Structure Of The Ribosome At 5.5 A Resolution. This File, 1giy, Contains The 50s Ribosome Subunit. The 30s Ribosome Subunit, Three Trna, And Mrna Molecules Are In The File 1gix gi|28373724|pdb|1ML5|EE Chain e, Structure Of The E. Coli Ribosomal Termination Complex With Release Factor 2 gi|66361021|pdb|1YL3|E Chain E, Crystal Structure Of 70s Ribosome With Thrs Operator And Trnas. Large Subunit. The Coordinates For The Small Subunit Are In The Pdb Entry 1yl4. gi|88192261|pdb|2B66|E Chain E, 50s Ribosomal Subunit From A Crystal Structure Of Release Factor Rf1, Trnas And Mrna Bound To The Ribosome. This File Contains The 50s Subunit From A Crystal Structure Of Release Factor Rf1, Trnas And Mrna Bound To The Ribosome And Is Described In Remark 400 gi|88192324|pdb|2B9N|E Chain E, 50s Ribosomal Subunit From A Crystal Structure Of Release Factor Rf2, Trnas And Mrna Bound To The Ribosome. This File Contains The 50s Subunit From A Crystal Structure Of Release Factor Rf1, Trnas And Mrna Bound To The Ribosome And Is Described In Remark 400. gi|88192379|pdb|2B9P|E Chain E, 50s Ribosomal Subunit From A Crystal Structure Of The Ribosome In Complex With Trnas And Mrna With A Stop Codon In The A-Site. This File Contains The 50s Subunit From A Crystal Structure Of The Ribosome In Complex With Trnas And Mrna With A Stop Codon In The A-Site And Is Described In Remark 400 Length = 338 Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust. Identities = 31/114 (27%), Positives = 44/114 (38%), Gaps = 17/114 (14%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G+ DV G+T GKG G +KR + H R G+ G +P RV Sbjct: 194 FRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 252 Query: 163 MAGRMGGNRVTVKNLEVVSVDD----------------KRGLILVKGCVPGAKK 200 G+ G ++ T N ++ + + LVKG VPG K Sbjct: 253 QQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDK 306 >gi|27066406|pdb|1FFK|B Chain B, Crystal Structure Of The Large Ribosomal Subunit From Haloarcula Marismortui At 2.4 Angstrom Resolution Length = 337 Score = 35.0 bits (79), Expect = 6.7, Method: Compositional matrix adjust. Identities = 31/114 (27%), Positives = 44/114 (38%), Gaps = 17/114 (14%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G+ DV G+T GKG G +KR + H R G+ G +P RV Sbjct: 193 FRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 251 Query: 163 MAGRMGGNRVTVKNLEVVSVDD----------------KRGLILVKGCVPGAKK 200 G+ G ++ T N ++ + + LVKG VPG K Sbjct: 252 QQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDK 305 >gi|148801|gb|AAA86859.1| ribosomal protein L3 [Haloarcula marismortui] Length = 338 Score = 35.0 bits (79), Expect = 7.0, Method: Compositional matrix adjust. Identities = 31/114 (27%), Positives = 44/114 (38%), Gaps = 17/114 (14%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G+ DV G+T GKG G +KR + H R G+ G +P RV Sbjct: 195 FRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 253 Query: 163 MAGRMGGNRVTVKNLEVVSVDD----------------KRGLILVKGCVPGAKK 200 G+ G ++ T N ++ + + LVKG VPG K Sbjct: 254 QQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDK 307 >gi|297527410|ref|YP_003669434.1| ribosomal protein L3 [Staphylothermus hellenicus DSM 12710] gi|297256326|gb|ADI32535.1| ribosomal protein L3 [Staphylothermus hellenicus DSM 12710] Length = 395 Score = 35.0 bits (79), Expect = 7.1, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 5/81 (6%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGR-VFKNK 161 F GQ +D+ G+T GKGF G +KR L H HR + PG Sbjct: 251 FREGQFIDIIGVTKGKGFQGVIKRFGVKELPRWH----KHRKGSRKIGSRSPGFGTMSET 306 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 G+ G +R T N ++ + Sbjct: 307 PQPGQTGFHRRTEYNKRIIKI 327 >gi|322388193|ref|ZP_08061797.1| beta-galactosidase [Streptococcus infantis ATCC 700779] gi|321140865|gb|EFX36366.1| beta-galactosidase [Streptococcus infantis ATCC 700779] Length = 2419 Score = 35.0 bits (79), Expect = 7.3, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 16/85 (18%) Query: 97 VFSPSYFTVGQLVDVTGMTIG---------KGFSGAMKRHNFGGLRATHGVSISHRSHGS 147 V + GQLVDVT T G +GFS +R F HGVSI H +G+ Sbjct: 434 VLKTKVYNEGQLVDVTEDTFGYRYFNWTAKEGFSLNGERMKF------HGVSI-HHDNGA 486 Query: 148 TGCRQDPGRVFKNKKMAGRMGGNRV 172 G ++ ++ K+ MG N + Sbjct: 487 LGAEENYKATYRKLKLLKDMGVNSI 511 >gi|257053359|ref|YP_003131192.1| 50S ribosomal protein L3P [Halorhabdus utahensis DSM 12940] gi|256692122|gb|ACV12459.1| ribosomal protein L3 [Halorhabdus utahensis DSM 12940] Length = 338 Score = 35.0 bits (79), Expect = 7.3, Method: Compositional matrix adjust. Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 17/112 (15%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G+ DV G+T GKG G +KR + H R G+ G +P RV Sbjct: 195 FRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 253 Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLI----------------LVKGCVPGA 198 G+ G ++ T N ++ D+ + L+KG +PG Sbjct: 254 QQGQTGYHQRTELNKRLIDFGDEDDVTPDGGFVNYGEVEGNYALIKGSIPGP 305 >gi|320107975|ref|YP_004183565.1| beta-lactamase [Terriglobus saanensis SP1PR4] gi|319926496|gb|ADV83571.1| beta-lactamase [Terriglobus saanensis SP1PR4] Length = 484 Score = 35.0 bits (79), Expect = 7.3, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 52/141 (36%), Gaps = 24/141 (17%) Query: 15 VYNIEGRRIPVTVLHLDNCQVV-VHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVN 73 +YN+E V LHLD V R +D G AV G G P N Sbjct: 358 IYNVEENPFGVKALHLDTSPAVCTFRLIDNEGEYAVTAGIGNWLEGETDMPGARLHHGYN 417 Query: 74 VSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLR 133 ++P + + R D D L + +F + F + F G R Sbjct: 418 LTPLRVVAGGR-WLDSDTLELNWIFPETTFRDTVVC------------------RFAGDR 458 Query: 134 ATHGVSISHRSHGSTGCRQDP 154 +++S R + ++G RQDP Sbjct: 459 ----ITVSRRVNVNSGARQDP 475 >gi|327466795|gb|EGF12319.1| hypothetical protein HMPREF9386_2380 [Streptococcus sanguinis SK330] Length = 629 Score = 35.0 bits (79), Expect = 8.2, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Query: 61 VSKPMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103 + KP+ GF S + V K KLF R+ K D++ VG V SP YF Sbjct: 139 IVKPVEGFSDSKIKVGDKIKLFSSRLLKTDEVTIVGIVNSPEYF 182 >gi|257387876|ref|YP_003177649.1| 50S ribosomal protein L3P [Halomicrobium mukohataei DSM 12286] gi|257170183|gb|ACV47942.1| ribosomal protein L3 [Halomicrobium mukohataei DSM 12286] Length = 338 Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 50/128 (39%), Gaps = 22/128 (17%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F G+ D+ +T GKG G +KR + H R G+ G +P RV Sbjct: 195 FRAGEYADIAAVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVP 253 Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRG----------------LILVKGCVPGAKKNSWILV 206 G+ G ++ T N ++ + D LVKG VPG + LV Sbjct: 254 QQGQTGYHQRTELNKRLIDIGDGDDASVDGGFVNYGEVDGPYTLVKGSVPGPDQR---LV 310 Query: 207 RDSFKSAV 214 R F+ AV Sbjct: 311 R--FRPAV 316 >gi|308798657|ref|XP_003074108.1| ribosomal protein L3.e, cytosolic-rice sp|P35684|RL3_ORYSA 60S ribosomal p (ISS) [Ostreococcus tauri] gi|116000280|emb|CAL49960.1| ribosomal protein L3.e, cytosolic-rice sp|P35684|RL3_ORYSA 60S ribosomal p (ISS) [Ostreococcus tauri] Length = 421 Score = 34.7 bits (78), Expect = 8.9, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 12/96 (12%) Query: 89 DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148 + +PV SVF +++D+ G+T GKGF G + R L +HR Sbjct: 234 EKTVPVDSVFQQD-----EMIDLIGVTKGKGFQGVVTRWGVTKLPRK-----THRGLRKV 283 Query: 149 GC--RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 GC P RV AG+MG + T N +V + Sbjct: 284 GCIGAWHPSRVSYTVARAGQMGYHHRTELNKKVYKI 319 >gi|13541155|ref|NP_110843.1| 50S ribosomal protein L3P [Thermoplasma volcanium GSS1] gi|42559678|sp|Q97BX7|RL3_THEVO RecName: Full=50S ribosomal protein L3P gi|14324543|dbj|BAB59470.1| ribosomal protein large subunit L3 [Thermoplasma volcanium GSS1] Length = 331 Score = 34.7 bits (78), Expect = 8.9, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 52/128 (40%), Gaps = 23/128 (17%) Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165 G+ VDV +T GKGF+G ++R G++ + HR T P V AG Sbjct: 189 GKFVDVLSVTKGKGFTGHVQRF---GVKLLPRKNRKHRRMIGTLGPWHPDWVRNTVPQAG 245 Query: 166 RMGGNRVTVKNLEVVSVDD-------------------KRGLILVKGCVPGAKKNSWILV 206 +MG + T+ N+ V+ K +L+ G VPG K I + Sbjct: 246 QMGYQQRTISNVRVLKYSKGEDADTINVRGGFLHYGLVKNDYVLLFGSVPGPAKR-LIKM 304 Query: 207 RDSFKSAV 214 RD + V Sbjct: 305 RDPARQKV 312 >gi|300521620|gb|ADK26021.1| r-protein L3p [Candidatus Nitrososphaera gargensis] Length = 332 Score = 34.7 bits (78), Expect = 9.0, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 51/119 (42%), Gaps = 24/119 (20%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 F VGQ +DV G+T GKG G + R FG R H S R+ G+ G P V Sbjct: 190 FQVGQNIDVFGITRGKGIEGPVTR--FGIKRKQHKSRKSVRAVGTLGP-ISPAVVMYTVA 246 Query: 163 MAGRMGGNRVTVKN--LEVVSVDDKRG-------------------LILVKGCVPGAKK 200 G+ G ++ T N + V+S +K G I+V+G VPG K Sbjct: 247 RQGQRGFHQRTEYNKRILVMSNTEKDGQNSINPSGGFKHFGLVKGDYIIVRGSVPGVPK 305 >gi|156937755|ref|YP_001435551.1| 50S ribosomal protein L3P [Ignicoccus hospitalis KIN4/I] gi|156566739|gb|ABU82144.1| LSU ribosomal protein L3P [Ignicoccus hospitalis KIN4/I] Length = 358 Score = 34.7 bits (78), Expect = 9.6, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 40/93 (43%), Gaps = 7/93 (7%) Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGS--TGCRQDPGRVFKN 160 G+ VDV G+T GKGF G +KR L H HR GS G R Sbjct: 214 IEAGKFVDVIGVTKGKGFQGVIKRFGVKELPKWH----KHRK-GSRRVGARSWGKGTSSY 268 Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKG 193 G+MG +R T N V+ + D I V+G Sbjct: 269 VPQPGQMGYHRRTDYNKRVLMISDDPSKINVEG 301 Searching..................................................done Results from round 2 >gi|85709057|ref|ZP_01040123.1| 50S ribosomal protein L3 [Erythrobacter sp. NAP1] gi|85690591|gb|EAQ30594.1| 50S ribosomal protein L3 [Erythrobacter sp. NAP1] Length = 273 Score = 288 bits (739), Expect = 3e-76, Method: Composition-based stats. Identities = 132/211 (62%), Positives = 162/211 (76%), Gaps = 1/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR +PVTVL L++CQVV HRT D +GY AVQ+GAGEAK KN Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHVPVTVLALEDCQVVSHRTADNDGYFAVQLGAGEAKQKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP R F V K+++ EFRV+ ++ L+PVGS+ S +F GQ VD+TG T GKGF Sbjct: 61 VAKPQREHFGKAGVGLKQRVAEFRVENEEGLVPVGSLISADHFVAGQKVDITGHTQGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR FGGLRATHGVSISHRSHGSTG RQDPGRVFK KKMAG MG + T NLEVV Sbjct: 121 AGAMKRWGFGGLRATHGVSISHRSHGSTGNRQDPGRVFKGKKMAGHMGDRQRTQMNLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RGL+ +KG VPG+ KN W+LVRD+ K Sbjct: 181 RTDADRGLLFIKGSVPGS-KNGWLLVRDAIK 210 >gi|254780261|ref|YP_003064674.1| 50S ribosomal protein L3 [Candidatus Liberibacter asiaticus str. psy62] gi|254039938|gb|ACT56734.1| 50S ribosomal protein L3 [Candidatus Liberibacter asiaticus str. psy62] Length = 221 Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats. Identities = 221/221 (100%), Positives = 221/221 (100%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN Sbjct: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF Sbjct: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV Sbjct: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS Sbjct: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 >gi|149184311|ref|ZP_01862629.1| 50S ribosomal protein L3 [Erythrobacter sp. SD-21] gi|148831631|gb|EDL50064.1| 50S ribosomal protein L3 [Erythrobacter sp. SD-21] Length = 285 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 131/211 (62%), Positives = 161/211 (76%), Gaps = 1/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR +PVTVL L++CQV HRT D++GY VQVG+GEAK KN Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHVPVTVLSLEDCQVTAHRTEDRDGYYGVQVGSGEAKQKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP R F+ V+ K K+ EFRV ++ LLPVG+ S +F GQ VD+TG T GKGF Sbjct: 61 VNKPQREAFAKAEVALKMKVGEFRVDSEEALLPVGARISAEHFVAGQKVDITGHTQGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR FGGLRATHGVSISHRSHGSTG RQDPGRVFK KKMAG MG + T +NLE+V Sbjct: 121 AGAMKRWGFGGLRATHGVSISHRSHGSTGNRQDPGRVFKGKKMAGHMGDRQRTQQNLEIV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D RGL+ VKG VPGA KN W++VRD+ K Sbjct: 181 RTDADRGLLFVKGSVPGA-KNGWLMVRDAVK 210 >gi|85374465|ref|YP_458527.1| 50S ribosomal protein L3 [Erythrobacter litoralis HTCC2594] gi|123293706|sp|Q2N9B1|RL3_ERYLH RecName: Full=50S ribosomal protein L3 gi|84787548|gb|ABC63730.1| ribosomal protein L3 [Erythrobacter litoralis HTCC2594] Length = 289 Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 132/215 (61%), Positives = 163/215 (75%), Gaps = 1/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR +PVTVL L++CQVV RT +++GY A+QVG+G AK KN Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHVPVTVLALEDCQVVSQRTQERDGYFALQVGSGVAKQKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP R F+ V K K+ EFRV+ +D LLPVG+ S +F GQ VD+TG T GKGF Sbjct: 61 VAKPQREAFAKAEVGLKMKVAEFRVEGEDGLLPVGAAISAEHFIAGQKVDITGYTQGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR FGGLRATHGVSISHRSHGSTG RQDPGRVFK KKMAG MG + T +NLEVV Sbjct: 121 AGAMKRWGFGGLRATHGVSISHRSHGSTGNRQDPGRVFKGKKMAGHMGDRQRTQQNLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D +RGLI VKG VPG KNSW+L+RD+ K + Sbjct: 181 RTDPERGLIFVKGSVPG-TKNSWMLIRDAVKLPLP 214 >gi|295109477|emb|CBL23430.1| 50S ribosomal protein L3, bacterial [Ruminococcus obeum A2-162] Length = 210 Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 126/212 (59%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G+ IPVTVL C V +T + +GY AVQVG GE + K Sbjct: 1 MKKAILATKVGMTQIFNEDGQLIPVTVLQAGPCVVTQVKTEENDGYAAVQVGYGEIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G F V+ ++ + EFR + + VG F G +D T ++ GKGF Sbjct: 61 VNKPEKGHFDKAGVAAQRFVKEFRFENAAE-YTVGQEIKADIFADGDHIDATAISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G DP +VFK K M G MG +VTV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKHMPGHMGNVQVTVQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + L+LVKG VPG KK S + ++++ KS Sbjct: 179 RVDTENNLLLVKGAVPGPKK-SLVTIKETVKS 209 >gi|253580619|ref|ZP_04857883.1| 50S ribosomal protein L3 [Ruminococcus sp. 5_1_39B_FAA] gi|251847990|gb|EES75956.1| 50S ribosomal protein L3 [Ruminococcus sp. 5_1_39BFAA] Length = 210 Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats. Identities = 90/212 (42%), Positives = 124/212 (58%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G+ IPVTVL C V +T + +GY AVQVG G+ + Sbjct: 1 MKKAILATKVGMTQIFNEDGQLIPVTVLQAGPCVVTQVKTEENDGYEAVQVGFGDIRESL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G F V+ K+ + EFR + VG F G +D T ++ GKGF Sbjct: 61 VNKPEKGHFDKAGVAVKRFVKEFRFDNAAE-YTVGQEIKADIFADGDHIDATAVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G DP +VFK K M G MG +VTV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKHMPGHMGNVQVTVQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + L+LVKG VPG KK S + ++++ KS Sbjct: 179 RVDTENNLLLVKGAVPGPKK-SLVTIKETVKS 209 >gi|296282582|ref|ZP_06860580.1| 50S ribosomal protein L3 [Citromicrobium bathyomarinum JL354] Length = 278 Score = 284 bits (728), Expect = 5e-75, Method: Composition-based stats. Identities = 131/219 (59%), Positives = 163/219 (74%), Gaps = 1/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR +PVTVL L+ CQV +RT D++GY +VQVG+GEAK KN Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHVPVTVLALEGCQVTANRTADRDGYWSVQVGSGEAKQKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP R F+ V K K+ EFRV+ +D LLPVG+ + +F GQ VDV G T GKGF Sbjct: 61 VNKPQREAFAKAEVGLKMKVAEFRVEGEDALLPVGATITADHFIAGQKVDVQGYTQGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR FGGLRATHGVS+SHRSHGSTG RQDPGRVFKNKKMAG MG + T +NLE+V Sbjct: 121 AGAMKRWGFGGLRATHGVSLSHRSHGSTGNRQDPGRVFKNKKMAGHMGDRQRTQQNLEIV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 D +RGL+ VKG VPGA KNSW+LV D+ K + Sbjct: 181 RTDSERGLLFVKGSVPGA-KNSWMLVADAVKLPMPADAP 218 >gi|119947126|ref|YP_944806.1| ribosomal protein L3 [Psychromonas ingrahamii 37] gi|166233184|sp|A1T0E2|RL3_PSYIN RecName: Full=50S ribosomal protein L3 gi|119865730|gb|ABM05207.1| LSU ribosomal protein L3P [Psychromonas ingrahamii 37] Length = 212 Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats. Identities = 102/213 (47%), Positives = 132/213 (61%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ +G IPVTVL +V +TLD +GY A+QV AG K Sbjct: 1 MTIGLIGRKVGMTRVFTEDGVSIPVTVLECSPNRVTQVKTLDTDGYQALQVTAGSKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP G F+ V + L+EF + + + VG+ S F VDVTG + GKG Sbjct: 61 VNKPEAGHFAKAGVEAGRGLWEFTLADNEGADIKVGAELSVELFNEINKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F GA+KR NF ATHG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLEV Sbjct: 121 FQGAIKRWNFSMQDATHGNSVSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LVKG V GA KN ++++ + K+ Sbjct: 181 VRVDIERNLLLVKGAVAGA-KNGDVIIKPAVKA 212 >gi|87199270|ref|YP_496527.1| 50S ribosomal protein L3 [Novosphingobium aromaticivorans DSM 12444] gi|109893532|sp|Q2G8Y0|RL3_NOVAD RecName: Full=50S ribosomal protein L3 gi|87134951|gb|ABD25693.1| LSU ribosomal protein L3P [Novosphingobium aromaticivorans DSM 12444] Length = 251 Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 134/219 (61%), Positives = 168/219 (76%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR +PVTVL L+NCQVV RT +++GY+A+Q+GAGEAK KN Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHVPVTVLSLENCQVVSVRTAERDGYVALQLGAGEAKQKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP R F+ V K ++ EFRV DD LL VGS + S+F GQ VD+TG T GKGF Sbjct: 61 VAKPQREHFAKAEVPLKMEVAEFRV-ADDALLDVGSTIAASHFVPGQYVDITGQTQGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GAMKR FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG + T +NLEVV Sbjct: 120 QGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRQRTQQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 DD+RGLI VKG VPG+ KN+W+LVRD+ K + + + Sbjct: 180 RTDDERGLIFVKGSVPGS-KNAWLLVRDAVKVSRHAEAP 217 >gi|254418121|ref|ZP_05031845.1| ribosomal protein L3 [Brevundimonas sp. BAL3] gi|196184298|gb|EDX79274.1| ribosomal protein L3 [Brevundimonas sp. BAL3] Length = 249 Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 126/219 (57%), Positives = 153/219 (69%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+KLGMT V+ +G +PVTVL LD CQVV RT +++GY+A+Q+GAG K KN Sbjct: 1 MRTGVIAKKLGMTRVFADDGAHVPVTVLQLDGCQVVGQRTQERDGYVALQLGAGTKKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +K R F+ V PK + EFRV + LL VG+ S +F VGQ VD+ G TIGKGF Sbjct: 61 TNKAQRETFAKAEVEPKAYVTEFRVDAE-GLLDVGAELSAEHFVVGQKVDIQGETIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F KKMAG G VT +NL VV Sbjct: 120 AGAMKRWNFGGLRATHGVSLSHRSHGSTGNRQDPGRTFPGKKMAGHYGAETVTTQNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 VD +RGLIL+KG VPG S++ VRD+ K A Sbjct: 180 RVDAERGLILIKGAVPG-HDGSYVKVRDAIKKARPADAP 217 >gi|220930965|ref|YP_002507873.1| ribosomal protein L3 [Halothermothrix orenii H 168] gi|254803676|sp|B8D0C4|RL3_HALOH RecName: Full=50S ribosomal protein L3 gi|219992275|gb|ACL68878.1| ribosomal protein L3 [Halothermothrix orenii H 168] Length = 211 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 92/216 (42%), Positives = 133/216 (61%), Gaps = 5/216 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT +++ +G IPVTV+ C V+ + +++GY A+QVG + Sbjct: 1 MAKGIIGKKLGMTQIFDDDGNVIPVTVVQAGPCVVIQKKVEERDGYNALQVGFEDVPEHR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F V PKK + EF +D L G + F G+LVDVTG++ GKGF Sbjct: 61 VNKPLKGHFERAGVKPKKHVKEFMDFPED--LNEGDEITVDIFEEGELVDVTGISKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF +HG S HR+ GS G D RVFK +K+ GRMG +RVT++NLEVV Sbjct: 119 AGTIKRWNFSRGPMSHG-SRFHRAPGSIGAV-DASRVFKGQKLPGRMGHDRVTIQNLEVV 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 VD ++ L+L+KG VPG K + +R++ K A N Sbjct: 177 RVDSEKNLLLIKGSVPGPNKG-ILTIREAVKKASNA 211 >gi|153812865|ref|ZP_01965533.1| hypothetical protein RUMOBE_03272 [Ruminococcus obeum ATCC 29174] gi|149831077|gb|EDM86166.1| hypothetical protein RUMOBE_03272 [Ruminococcus obeum ATCC 29174] Length = 210 Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats. Identities = 93/212 (43%), Positives = 127/212 (59%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G+ IPVTVL C V +T + +GY AVQVG GE + K Sbjct: 1 MKKAILATKVGMTQIFNEDGQLIPVTVLQAGPCVVTQVKTEENDGYAAVQVGYGEIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G F V+ K+ + EFR + + VG F G +DVT ++ GKGF Sbjct: 61 VNKPEKGHFDKAGVAAKRFVKEFRFENAAE-YTVGQEIKTDIFADGDHIDVTAVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G DP +VFK K M G MG +VTV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKHMPGHMGNVQVTVQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + L+LVKG VPG KK S + ++++ KS Sbjct: 179 RVDTENNLLLVKGAVPGPKK-SLVTIKETVKS 209 >gi|225574700|ref|ZP_03783310.1| hypothetical protein RUMHYD_02777 [Blautia hydrogenotrophica DSM 10507] gi|225038090|gb|EEG48336.1| hypothetical protein RUMHYD_02777 [Blautia hydrogenotrophica DSM 10507] Length = 224 Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats. Identities = 88/212 (41%), Positives = 126/212 (59%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G IPVTVL C V +T + +GY AVQVG + + Sbjct: 15 MKKAILATKVGMTQIFNEDGVLIPVTVLQAGPCVVTQVKTEENDGYSAVQVGYADKRENL 74 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+G F VS K+ + EF++ + +G F G +D T ++ GKG+ Sbjct: 75 VNKPMKGHFEKAGVSCKRFVKEFKLDNAAE-YELGQEIKVDVFEAGDHIDATAISKGKGY 133 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G DP +VFK KKM G+MG ++T++NLEVV Sbjct: 134 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGAASDPSKVFKGKKMPGQMGNKQITIQNLEVV 192 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + L+LVKG VPG KK S + ++++ KS Sbjct: 193 RVDAENNLLLVKGAVPGPKK-SLVTIKETVKS 223 >gi|84685437|ref|ZP_01013335.1| 50S ribosomal protein L3 [Maritimibacter alkaliphilus HTCC2654] gi|84666594|gb|EAQ13066.1| 50S ribosomal protein L3 [Rhodobacterales bacterium HTCC2654] Length = 290 Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats. Identities = 127/215 (59%), Positives = 164/215 (76%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT ++ +G+++PVTVL LD QVV RT +K+GY AVQ+GAG AK K Sbjct: 2 MRSGVIAKKVGMTRLFLEDGKQVPVTVLQLDGLQVVAQRTTEKDGYTAVQLGAGSAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F++ NV+PK+K+ EFRV + +L+ VG + ++ GQ VDV+G +IGKGF Sbjct: 62 TSKAMRGHFATANVAPKRKVAEFRVDAE-NLINVGEEITADHYFAGQFVDVSGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPGRVFK KKMAG MG RVT +NL+VV Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGRVFKGKKMAGHMGAARVTTQNLQVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D +RGLI++KG VPG+ K W+ ++D+ K Sbjct: 181 KTDSERGLIMIKGAVPGS-KGGWVTIKDAVKKPFP 214 >gi|89076770|ref|ZP_01163043.1| 50S ribosomal protein L3 [Photobacterium sp. SKA34] gi|90581758|ref|ZP_01237542.1| 50S ribosomal protein L3 [Vibrio angustum S14] gi|89047583|gb|EAR53197.1| 50S ribosomal protein L3 [Photobacterium sp. SKA34] gi|90437056|gb|EAS62263.1| 50S ribosomal protein L3 [Vibrio angustum S14] Length = 209 Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats. Identities = 94/210 (44%), Positives = 136/210 (64%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT ++ +G IPVTV+ ++N +V ++++ +GY A+QV AG K VS Sbjct: 2 IGLIGRKVGMTRIFTEDGISIPVTVVEVENNRVTQVKSVETDGYNAIQVTAGTKKASRVS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLENSEEF-AVGAELNVELFNDIKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPG+ + ++V+ + K+ Sbjct: 181 DAERNLLLIKGAVPGSTGGN-VIVKPAVKA 209 >gi|260432429|ref|ZP_05786400.1| 50S ribosomal protein L3 [Silicibacter lacuscaerulensis ITI-1157] gi|260416257|gb|EEX09516.1| 50S ribosomal protein L3 [Silicibacter lacuscaerulensis ITI-1157] Length = 242 Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats. Identities = 134/215 (62%), Positives = 164/215 (76%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ +GR+IPVTVLHLDN QVV RT DK+GY AVQ+GAG AK K Sbjct: 2 MRSGIIAKKVGMTRLFMEDGRQIPVTVLHLDNLQVVAQRTADKDGYTAVQLGAGAAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F++ V PK+KL EFRV +D L+ VG+ S +F GQ VDV+G +IGKGF Sbjct: 62 TSKAMRGHFAAAKVEPKRKLAEFRVSED-ALIEVGAEISADHFVEGQKVDVSGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D +RGL+ +KG VPG K+ W+ V+D+ K Sbjct: 181 KTDAERGLVFIKGAVPGP-KSGWVTVKDAVKKKAP 214 >gi|149192608|ref|ZP_01870762.1| 50S ribosomal protein L3 [Vibrio shilonii AK1] gi|148833557|gb|EDL50640.1| 50S ribosomal protein L3 [Vibrio shilonii AK1] Length = 209 Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats. Identities = 101/210 (48%), Positives = 136/210 (64%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V RK+GMT ++ EG IPVTV+ ++ +V RTLD +GY A+QV AGE K VS Sbjct: 2 IGLVGRKVGMTRIFTEEGVSIPVTVVEVEANRVTQVRTLDTDGYAAIQVTAGEKKASRVS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELNVELFNDVKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 AVKRWNFATQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPGA + ++V+ + K+ Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAIKA 209 >gi|260770913|ref|ZP_05879842.1| LSU ribosomal protein L3p (L3e) [Vibrio furnissii CIP 102972] gi|260614150|gb|EEX39340.1| LSU ribosomal protein L3p (L3e) [Vibrio furnissii CIP 102972] gi|315178959|gb|ADT85873.1| 50S ribosomal protein L3 [Vibrio furnissii NCTC 11218] Length = 209 Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats. Identities = 96/210 (45%), Positives = 134/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV AG K V+ Sbjct: 2 IGLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF G Sbjct: 62 KAEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGSELTVELFNETKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPGA + ++V+ + K+ Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|258625740|ref|ZP_05720619.1| 50S ribosomal protein L3 [Vibrio mimicus VM603] gi|258581978|gb|EEW06848.1| 50S ribosomal protein L3 [Vibrio mimicus VM603] Length = 209 Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats. Identities = 97/210 (46%), Positives = 136/210 (64%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV AG K V+ Sbjct: 2 IGLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR++ ++ VGS + F+ + VDVTG + GKGF G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFSEVKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPGA + ++V+ + K+ Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|89070557|ref|ZP_01157846.1| 50S ribosomal protein L3 [Oceanicola granulosus HTCC2516] gi|89043864|gb|EAR50062.1| 50S ribosomal protein L3 [Oceanicola granulosus HTCC2516] Length = 292 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 127/213 (59%), Positives = 161/213 (75%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSG++A+K+GMT ++ +G++IPVTVL LD QVV RT++ +GY AVQ+GAG AK K Sbjct: 2 LRSGIIAKKVGMTRIFQEDGKQIPVTVLQLDKLQVVAKRTVETDGYSAVQLGAGIAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S PMRG F+ NV PK+K+ EFRV ++L+ VG + ++ GQ VDV+G +IGKGF Sbjct: 62 TSAPMRGHFAKANVEPKRKIAEFRV-AAENLIEVGEEITADHYFEGQYVDVSGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D RGLI+VKG VPG+ K W+ V+D+ K Sbjct: 181 RTDADRGLIMVKGAVPGS-KGGWVTVKDAVKKP 212 >gi|261211151|ref|ZP_05925440.1| LSU ribosomal protein L3p (L3e) [Vibrio sp. RC341] gi|262166617|ref|ZP_06034354.1| LSU ribosomal protein L3p (L3e) [Vibrio mimicus VM223] gi|262170467|ref|ZP_06038145.1| LSU ribosomal protein L3p (L3e) [Vibrio mimicus MB-451] gi|262401883|ref|ZP_06078448.1| LSU ribosomal protein L3p (L3e) [Vibrio sp. RC586] gi|260839652|gb|EEX66263.1| LSU ribosomal protein L3p (L3e) [Vibrio sp. RC341] gi|261891543|gb|EEY37529.1| LSU ribosomal protein L3p (L3e) [Vibrio mimicus MB-451] gi|262026333|gb|EEY45001.1| LSU ribosomal protein L3p (L3e) [Vibrio mimicus VM223] gi|262351855|gb|EEZ00986.1| LSU ribosomal protein L3p (L3e) [Vibrio sp. RC586] Length = 209 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 97/210 (46%), Positives = 135/210 (64%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV AG K V+ Sbjct: 2 IGLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPGA + ++V+ + K+ Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|163796919|ref|ZP_02190876.1| Ribosomal protein L3 [alpha proteobacterium BAL199] gi|159177908|gb|EDP62457.1| Ribosomal protein L3 [alpha proteobacterium BAL199] Length = 249 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 130/215 (60%), Positives = 161/215 (74%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT V+ EG +PVTVL +D CQVV RT DK+GY AVQ+G G K K+ Sbjct: 1 MRSGMIAQKVGMTRVFTDEGTHVPVTVLKVDGCQVVSVRTQDKDGYTAVQLGVGVRKPKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KPMRG F+ V PK+KL EFRV +D LL VG+ S +F GQ VDVTG +IGKGF Sbjct: 61 TTKPMRGHFAKAGVEPKRKLVEFRVTED-ALLDVGAELSVEHFVAGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNF GLRA+HGVS+SHRSHGSTG QDPGRV+K KKMAG MG RVT +NL +V Sbjct: 120 AGAMKRHNFSGLRASHGVSLSHRSHGSTGNNQDPGRVWKGKKMAGHMGDVRVTTQNLVIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 S D +RGLILV+G VPG+ W+L+ D+ K+ + Sbjct: 180 STDAERGLILVRGAVPGSD-GGWVLLSDAVKAKLP 213 >gi|260779503|ref|ZP_05888393.1| LSU ribosomal protein L3p (L3e) [Vibrio coralliilyticus ATCC BAA-450] gi|260604312|gb|EEX30616.1| LSU ribosomal protein L3p (L3e) [Vibrio coralliilyticus ATCC BAA-450] Length = 209 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 98/210 (46%), Positives = 134/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+ EG IPVTV+ ++ +V RTL+ +GY A+QV G K VS Sbjct: 2 IGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVRTLETDGYAAIQVTTGAKKANRVS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELTVELFNETKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 AVKRWNFSTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPGA + ++V+ + K+ Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|15642591|ref|NP_232224.1| 50S ribosomal protein L3 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|147673700|ref|YP_001218090.1| 50S ribosomal protein L3 [Vibrio cholerae O395] gi|153827414|ref|ZP_01980081.1| ribosomal protein L3 [Vibrio cholerae MZO-2] gi|153831409|ref|ZP_01984076.1| ribosomal protein L3 [Vibrio cholerae 623-39] gi|227082713|ref|YP_002811264.1| ribosomal protein L3 [Vibrio cholerae M66-2] gi|229507352|ref|ZP_04396857.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae BX 330286] gi|229509725|ref|ZP_04399206.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae B33] gi|229513519|ref|ZP_04402983.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae TMA 21] gi|229516849|ref|ZP_04406295.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae RC9] gi|229521662|ref|ZP_04411080.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae TM 11079-80] gi|229524577|ref|ZP_04413982.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae bv. albensis VL426] gi|229527474|ref|ZP_04416866.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae 12129(1)] gi|229606858|ref|YP_002877506.1| 50S ribosomal protein L3 [Vibrio cholerae MJ-1236] gi|254292178|ref|ZP_04962948.1| ribosomal protein L3 [Vibrio cholerae AM-19226] gi|254851136|ref|ZP_05240486.1| ribosomal protein L3 [Vibrio cholerae MO10] gi|255744435|ref|ZP_05418387.1| LSU ribosomal protein L3p (L3e) [Vibrio cholera CIRS 101] gi|262170153|ref|ZP_06037842.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae RC27] gi|42559699|sp|Q9KNY4|RL3_VIBCH RecName: Full=50S ribosomal protein L3 gi|172047551|sp|A5F549|RL3_VIBC3 RecName: Full=50S ribosomal protein L3 gi|254803701|sp|C3LRQ8|RL3_VIBCM RecName: Full=50S ribosomal protein L3 gi|9657183|gb|AAF95737.1| ribosomal protein L3 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|146315583|gb|ABQ20122.1| ribosomal protein L3 [Vibrio cholerae O395] gi|148873110|gb|EDL71245.1| ribosomal protein L3 [Vibrio cholerae 623-39] gi|149738687|gb|EDM53029.1| ribosomal protein L3 [Vibrio cholerae MZO-2] gi|150421907|gb|EDN13884.1| ribosomal protein L3 [Vibrio cholerae AM-19226] gi|227010601|gb|ACP06813.1| ribosomal protein L3 [Vibrio cholerae M66-2] gi|227014485|gb|ACP10695.1| ribosomal protein L3 [Vibrio cholerae O395] gi|229335106|gb|EEO00591.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae 12129(1)] gi|229338158|gb|EEO03175.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae bv. albensis VL426] gi|229341256|gb|EEO06260.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae TM 11079-80] gi|229345912|gb|EEO10884.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae RC9] gi|229349396|gb|EEO14352.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae TMA 21] gi|229353199|gb|EEO18138.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae B33] gi|229354857|gb|EEO19778.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae BX 330286] gi|229369513|gb|ACQ59936.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae MJ-1236] gi|254846841|gb|EET25255.1| ribosomal protein L3 [Vibrio cholerae MO10] gi|255737960|gb|EET93353.1| LSU ribosomal protein L3p (L3e) [Vibrio cholera CIRS 101] gi|262021561|gb|EEY40273.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae RC27] gi|327485078|gb|AEA79485.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae LMA3894-4] Length = 209 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 96/210 (45%), Positives = 134/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV G K V+ Sbjct: 2 IGLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGSKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPGA + ++V+ + K+ Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|88860959|ref|ZP_01135595.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas tunicata D2] gi|88817172|gb|EAR26991.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas tunicata D2] Length = 211 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 97/212 (45%), Positives = 129/212 (60%), Gaps = 1/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ ++ +T +GY A+QV AG K Sbjct: 1 MALGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRIAQIKTDANDGYNALQVTAGTKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ V + L+EFR+ D+ VGS + F VDVTG + GKGF Sbjct: 61 VNKAQAGHFAKAGVEAGRGLWEFRLSGDEGSFEVGSEITVELFNDVTKVDVTGTSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG MG RVT +NLEVV Sbjct: 121 QGGVKRWNFRTQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGHMGAERVTTQNLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPG+ N ++V+ + K+ Sbjct: 181 RVDVERNLLLVKGAVPGSI-NGDVIVKPAVKA 211 >gi|91229293|ref|ZP_01262910.1| 50S ribosomal protein L3 [Vibrio alginolyticus 12G01] gi|262392516|ref|YP_003284370.1| 50S ribosomal protein L3p [Vibrio sp. Ex25] gi|269964734|ref|ZP_06178972.1| 50S ribosomal protein L3 [Vibrio alginolyticus 40B] gi|91187418|gb|EAS73766.1| 50S ribosomal protein L3 [Vibrio alginolyticus 12G01] gi|262336110|gb|ACY49905.1| LSU ribosomal protein L3p (L3e) [Vibrio sp. Ex25] gi|269830633|gb|EEZ84854.1| 50S ribosomal protein L3 [Vibrio alginolyticus 40B] Length = 209 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 97/210 (46%), Positives = 134/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+ EG IPVTV+ ++ +V +TL+ +GY A+QV AG K V+ Sbjct: 2 IGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF G Sbjct: 62 KAEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGSELTVELFNETKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPGA + ++V+ + K+ Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|323495504|ref|ZP_08100578.1| 50S ribosomal protein L3 [Vibrio sinaloensis DSM 21326] gi|323319385|gb|EGA72322.1| 50S ribosomal protein L3 [Vibrio sinaloensis DSM 21326] Length = 209 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 97/210 (46%), Positives = 135/210 (64%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+ EG IPVTV+ ++ +V +TL+ +GY A+QV G K VS Sbjct: 2 IGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGAKKANRVS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR++ D++ VG+ + F + VDVTG + GKGF G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLENDEEF-AVGAELTVELFNDTKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPG+ + ++V+ + K+ Sbjct: 181 DAERNLLLIKGAVPGSTGGN-VIVKPAVKA 209 >gi|330447037|ref|ZP_08310687.1| 50S ribosomal subunit protein L3 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491228|dbj|GAA05184.1| 50S ribosomal subunit protein L3 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 209 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 93/210 (44%), Positives = 134/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT ++ +G IPVTV+ ++ +V ++++ +GY A+QV G K VS Sbjct: 2 IGLIGRKVGMTRIFTEDGVSIPVTVVEVEANRVTQVKSVETDGYNAIQVTTGSKKANRVS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLENSEEF-AVGAELNVELFNDIKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPGA + ++V+ + K+ Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|83858566|ref|ZP_00952088.1| 50S ribosomal protein L3 [Oceanicaulis alexandrii HTCC2633] gi|83853389|gb|EAP91241.1| 50S ribosomal protein L3 [Oceanicaulis alexandrii HTCC2633] Length = 246 Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 129/212 (60%), Positives = 163/212 (76%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+KLGMT V+ +G +PVTVLHLD QVV RT + +GY AVQ+GAG+AK K Sbjct: 1 MRTGLLAKKLGMTRVFTEDGDHVPVTVLHLDGLQVVAQRTSENDGYTAVQLGAGKAKAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ +V PK+KL EFRV +D L+ G+ S +F VGQ VDV+G +IGKGF Sbjct: 61 TSKAMRGHFAKASVEPKRKLVEFRV-PEDALIEAGAELSAEHFVVGQKVDVSGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG +G RVT+++LE+V Sbjct: 120 AGGMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHLGSERVTIQSLEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +RGL+LVKG VPG+ K SW+ +RD+ K Sbjct: 180 RVDAERGLVLVKGAVPGS-KESWVEIRDAVKG 210 >gi|163739437|ref|ZP_02146847.1| 50S ribosomal protein L3 [Phaeobacter gallaeciensis BS107] gi|163740231|ref|ZP_02147625.1| 50S ribosomal protein L3 [Phaeobacter gallaeciensis 2.10] gi|161386089|gb|EDQ10464.1| 50S ribosomal protein L3 [Phaeobacter gallaeciensis 2.10] gi|161387190|gb|EDQ11549.1| 50S ribosomal protein L3 [Phaeobacter gallaeciensis BS107] Length = 237 Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats. Identities = 131/215 (60%), Positives = 161/215 (74%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ +G+++PVTVL LD QV RT +K+GY AVQ+GAG AKVK Sbjct: 1 MRSGIIAKKVGMTRLFLEDGKQVPVTVLQLDGLQVTAQRTEEKDGYTAVQLGAGSAKVKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK MRG F++ V PK+KL EFRV D L+ VG+ S +F GQ VDVTG +IGKGF Sbjct: 61 VSKAMRGHFAAAKVEPKRKLVEFRV-PADALIEVGAEISAEHFLEGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D RGLI++KG VPG+ K W+ V+D+ K Sbjct: 180 KTDADRGLIMIKGAVPGS-KGGWVTVKDAVKKKAP 213 >gi|28897031|ref|NP_796636.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus RIMD 2210633] gi|153840341|ref|ZP_01993008.1| ribosomal protein L3 [Vibrio parahaemolyticus AQ3810] gi|260877949|ref|ZP_05890304.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus AN-5034] gi|260897591|ref|ZP_05906087.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus Peru-466] gi|260899521|ref|ZP_05907916.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus AQ4037] gi|42559620|sp|Q87T13|RL3_VIBPA RecName: Full=50S ribosomal protein L3 gi|28805239|dbj|BAC58520.1| ribosomal protein L3 [Vibrio parahaemolyticus RIMD 2210633] gi|149745999|gb|EDM57129.1| ribosomal protein L3 [Vibrio parahaemolyticus AQ3810] gi|308087536|gb|EFO37231.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus Peru-466] gi|308089929|gb|EFO39624.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus AN-5034] gi|308108784|gb|EFO46324.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus AQ4037] gi|328471834|gb|EGF42711.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus 10329] Length = 209 Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats. Identities = 96/210 (45%), Positives = 134/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+ EG IPVTV+ ++ +V +TL+ +GY A+QV AG K V+ Sbjct: 2 IGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF G Sbjct: 62 KAEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELTVELFNETKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPGA + ++V+ + K+ Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|192360421|ref|YP_001981208.1| 50S ribosomal protein L3 [Cellvibrio japonicus Ueda107] gi|226725144|sp|B3PK37|RL3_CELJU RecName: Full=50S ribosomal protein L3 gi|190686586|gb|ACE84264.1| ribosomal protein L3 [Cellvibrio japonicus Ueda107] Length = 214 Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats. Identities = 100/216 (46%), Positives = 134/216 (62%), Gaps = 2/216 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT V+ +G IPVTV+ ++ +V +T D +GY AVQ+ GE + Sbjct: 1 MTIGIVGRKTGMTRVFTDDGVSIPVTVIEVEPNRVTQVKTADTDGYSAVQITVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ NV + ++E R + VG+ + F+ GQ +DVTG + GKG+ Sbjct: 61 VTKSEAGHFAKANVEAGRSVWELR-NNSQEAFEVGASLTVEAFSAGQFIDVTGTSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NFG ATHG S SHR GSTG Q PGRVFKNKKM G MG RVTV+NLE+V Sbjct: 120 AGTVKRWNFGMQDATHGNSRSHRVPGSTGQCQSPGRVFKNKKMTGHMGAERVTVQNLEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 VD +R L+LVKG +PGA ++VR + K+ N Sbjct: 180 RVDAERNLLLVKGAIPGAPGGD-VIVRPAVKARTNA 214 >gi|56698636|ref|YP_169013.1| 50S ribosomal protein L3 [Ruegeria pomeroyi DSS-3] gi|81819888|sp|Q5LLU6|RL3_SILPO RecName: Full=50S ribosomal protein L3 gi|56680373|gb|AAV97039.1| ribosomal protein L3 [Ruegeria pomeroyi DSS-3] Length = 241 Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats. Identities = 132/215 (61%), Positives = 164/215 (76%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ +G++IPVTVL LDN QVV RT +K+GY AVQ+GAG K+K Sbjct: 1 MRSGIIAKKVGMTRLFMEDGKQIPVTVLQLDNLQVVAQRTTEKDGYTAVQLGAGTPKIKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK MRG F++ V PK+KL EFRV +D L+ VG+ S +F GQ VDV+G +IGKGF Sbjct: 61 VSKAMRGHFAAQKVEPKRKLAEFRVSED-ALIEVGAEISAEHFLTGQKVDVSGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPGRVFK KKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGRVFKGKKMAGHMGAARVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D +RGL+ +KG VPG K+ W+ V+D+ K Sbjct: 180 KTDAERGLVFIKGAVPGP-KSGWVTVKDAVKKKAP 213 >gi|312793939|ref|YP_004026862.1| 50S ribosomal protein l3 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312877365|ref|ZP_07737330.1| 50S ribosomal protein L3 [Caldicellulosiruptor lactoaceticus 6A] gi|311795839|gb|EFR12203.1| 50S ribosomal protein L3 [Caldicellulosiruptor lactoaceticus 6A] gi|312181079|gb|ADQ41249.1| 50S ribosomal protein L3 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 210 Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats. Identities = 102/212 (48%), Positives = 133/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V++ GR IPVTV+ C VV +T++K+GY A+QVG + K Sbjct: 1 MTKGILGKKIGMTQVFDEAGRAIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+RG F+ V PK+ L E R+ KD D VG F G+ VDVTG++ KGF Sbjct: 61 LNKPLRGHFAKHGVKPKRFLRELRL-KDADKYEVGQEIRVDIFQPGERVDVTGISKAKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH +HG S+ HR GS G P R F KKM GRMGG RVTV NL+VV Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPG KNS +++RDS KS Sbjct: 179 KVDPERNLLLVKGSVPG-NKNSLLIIRDSVKS 209 >gi|312135496|ref|YP_004002834.1| 50S ribosomal protein l3 [Caldicellulosiruptor owensensis OL] gi|311775547|gb|ADQ05034.1| 50S ribosomal protein L3 [Caldicellulosiruptor owensensis OL] Length = 210 Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats. Identities = 102/212 (48%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V++ EGR IPVTV+ C VV +T++K+GY A+QVG + K Sbjct: 1 MTKGILGKKIGMTQVFDEEGRVIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP++G F+ V PK+ L E R+ KD D VG F G+ VDVTG++ KGF Sbjct: 61 LNKPLKGHFAKHGVKPKRYLRELRL-KDADKYEVGQEIRVDIFQPGERVDVTGISKAKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH +HG S+ HR GS G P R F KKM GRMGG RVTV NL+VV Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPG KNS +++RDS KS Sbjct: 179 KVDPERNLLLVKGSVPG-NKNSLLIIRDSVKS 209 >gi|114764144|ref|ZP_01443382.1| 50S ribosomal protein L3 [Pelagibaca bermudensis HTCC2601] gi|114543296|gb|EAU46312.1| 50S ribosomal protein L3 [Roseovarius sp. HTCC2601] Length = 280 Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats. Identities = 131/215 (60%), Positives = 163/215 (75%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT ++ +G+++PVTVL LD CQVV RT DK+GY AVQ+GAG K KN Sbjct: 2 MRSGVIAKKVGMTRLFLEDGKQVPVTVLQLDGCQVVAQRTSDKDGYTAVQLGAGSVKAKN 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKPMRG F+ V PK+K+ EFRV + +L+ VG + ++ GQ VDV+G TIGKGF Sbjct: 62 VSKPMRGHFAIAKVEPKRKIAEFRVDAE-NLIGVGEEITADHYFEGQFVDVSGTTIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D RGLI++KG VPG+ K W+ ++D+ K Sbjct: 181 KTDASRGLIMIKGAVPGS-KGGWVTIKDAVKKPFP 214 >gi|84503642|ref|ZP_01001680.1| 50S ribosomal protein L3 [Oceanicola batsensis HTCC2597] gi|84387939|gb|EAQ00991.1| 50S ribosomal protein L3 [Oceanicola batsensis HTCC2597] Length = 290 Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats. Identities = 125/215 (58%), Positives = 161/215 (74%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSG++A+K+GMT ++ +G+++PVTVL LD QVV RT + +GY AVQ+GAG AK K Sbjct: 2 LRSGIIAKKIGMTRLFMEDGKQVPVTVLQLDKLQVVAQRTAEAHGYTAVQLGAGTAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F++ +V PK+K+ EFRV D +L+ VG + ++ GQ VDV G +IGKGF Sbjct: 62 TSKAMRGHFAAASVEPKRKIAEFRVDPD-NLIKVGEEITADHYFEGQFVDVCGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D +RGLI++KG VPG+ K W+ V+D+ K Sbjct: 181 KTDSERGLIMIKGAVPGS-KGGWVTVKDAVKKPFP 214 >gi|220935492|ref|YP_002514391.1| ribosomal protein L3 [Thioalkalivibrio sp. HL-EbGR7] gi|254803700|sp|B8GV58|RL3_THISH RecName: Full=50S ribosomal protein L3 gi|219996802|gb|ACL73404.1| ribosomal protein L3 [Thioalkalivibrio sp. HL-EbGR7] Length = 214 Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats. Identities = 102/213 (47%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RKLGMT V+ +G +PVTV+ +D +V +T +++GY A+QV G K Sbjct: 1 MAIGLVGRKLGMTRVFTEDGASLPVTVIEVDPNRVTQVKTEERDGYRALQVTTGARKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP G F+ V + L+EFR+ D + G+ F GQ+VDVTG++ GKG Sbjct: 61 VTKPRAGHFAKAGVEAGRGLWEFRLDGDQGAEIETGAELKVDIFEAGQIVDVTGISKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KRHNF ATHG S+SHR+ GS G Q PGRVFK KKMAG MG R TV+NLEV Sbjct: 121 FQGVIKRHNFSMQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHMGNERCTVQNLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+L+KG VPG+ + +LVR K+ Sbjct: 181 VRVDVERNLLLIKGAVPGSTGGN-VLVRPGVKA 212 >gi|291547982|emb|CBL21090.1| 50S ribosomal protein L3, bacterial [Ruminococcus sp. SR1/5] Length = 210 Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 124/212 (58%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G IPVTVL C V +T + +GY +VQVG GE + K Sbjct: 1 MKKAILATKVGMTQIFNEDGMLIPVTVLQAGPCVVTQVKTEENDGYTSVQVGFGEIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G F V+ K+ + EFR + VG F G +D T ++ GKGF Sbjct: 61 VNKPEKGHFDKAGVAVKRFVKEFRFDNAGE-YEVGQEIKADIFAAGDHIDATAVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G DP +VFK K M G MG +VTV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKHMPGHMGHVQVTVQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + L+LVKG VPG KK S + ++++ KS Sbjct: 179 RVDTENNLLLVKGAVPGPKK-SLVTIKETVKS 209 >gi|315497973|ref|YP_004086777.1| 50S ribosomal protein l3 [Asticcacaulis excentricus CB 48] gi|315415985|gb|ADU12626.1| 50S ribosomal protein L3 [Asticcacaulis excentricus CB 48] Length = 243 Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats. Identities = 124/215 (57%), Positives = 157/215 (73%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+KLGMT ++ +G+ +PVTVL L+ CQVV RT DK+GY A+Q+GAG K KN Sbjct: 1 MRTGLLAKKLGMTRYFDAQGQHVPVTVLSLEGCQVVAQRTKDKDGYTALQLGAGTRKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKP R F+ V PK L EFRV +D L+ VG+ FS +F GQ VD+ G TIGKGF Sbjct: 61 VSKPERERFAKAQVEPKAILSEFRVSED-ALVEVGAEFSADHFVEGQRVDIQGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGG+RATHGVS+SHR+HGSTG RQDPGR F KKMAG G VT NLEVV Sbjct: 120 AGAMKRWNFGGMRATHGVSVSHRAHGSTGNRQDPGRTFPGKKMAGHYGVETVTTLNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +D +RGLI ++G VPGA+ S++ +RD+ K + Sbjct: 180 RIDAERGLIFIRGAVPGAE-GSFVKIRDAVKKSAP 213 >gi|269104012|ref|ZP_06156709.1| LSU ribosomal protein L3p (L3e) [Photobacterium damselae subsp. damselae CIP 102761] gi|268163910|gb|EEZ42406.1| LSU ribosomal protein L3p (L3e) [Photobacterium damselae subsp. damselae CIP 102761] Length = 209 Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats. Identities = 92/210 (43%), Positives = 134/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT ++ G IPVTV+ ++ +V +T++ +GY A+Q+ G K V+ Sbjct: 2 IGLIGRKVGMTRIFTEAGVSIPVTVVEVEANRVSQVKTVETDGYNAIQITTGSKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR++ +++ VG+ + F + VDVTG + GKGF G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLENNEEF-AVGAELTVELFNEVKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPGA + ++V+ + K+ Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|77462259|ref|YP_351763.1| 50S ribosomal protein L3 [Rhodobacter sphaeroides 2.4.1] gi|126461135|ref|YP_001042249.1| 50S ribosomal protein L3 [Rhodobacter sphaeroides ATCC 17029] gi|221638113|ref|YP_002524375.1| 50S ribosomal protein L3 [Rhodobacter sphaeroides KD131] gi|109893550|sp|Q3J5S2|RL3_RHOS4 RecName: Full=50S ribosomal protein L3 gi|77386677|gb|ABA77862.1| LSU ribosomal protein L3P [Rhodobacter sphaeroides 2.4.1] gi|126102799|gb|ABN75477.1| LSU ribosomal protein L3P [Rhodobacter sphaeroides ATCC 17029] gi|221158894|gb|ACL99873.1| 50S ribosomal protein L3 [Rhodobacter sphaeroides KD131] Length = 240 Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats. Identities = 127/217 (58%), Positives = 161/217 (74%), Gaps = 2/217 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT ++ +G+++PVTVL LD+ QVV RT +K+GY AVQ+GAG AK K Sbjct: 1 MRSGVIAKKLGMTRLFLEDGKQVPVTVLQLDSLQVVAQRTTEKDGYTAVQLGAGAAKAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS RG F+ NV PK+K+ EFRV D L+ VG+ + ++ GQ VD+ G +IGKGF Sbjct: 61 VSAAQRGHFAKANVEPKRKIAEFRVTPDC-LIDVGAEITADHYFAGQFVDIAGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 D RGLI+VKG VPG+ K W+ ++D+ K + Sbjct: 180 RTDSDRGLIMVKGAVPGS-KGGWVTIKDAVKKPAPEQ 215 >gi|254474359|ref|ZP_05087745.1| ribosomal protein L3 [Ruegeria sp. R11] gi|214028602|gb|EEB69437.1| ribosomal protein L3 [Ruegeria sp. R11] Length = 239 Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats. Identities = 131/215 (60%), Positives = 161/215 (74%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ +G+++PVTVL LD QV RT +K+GY AVQ+GAG AKVK Sbjct: 3 MRSGIIAKKVGMTRLFLEDGKQVPVTVLQLDGLQVTAQRTEEKDGYTAVQLGAGSAKVKR 62 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK MRG F++ V PK+KL EFRV D L+ VG+ S +F GQ VDVTG +IGKGF Sbjct: 63 VSKAMRGHFAAAKVEPKRKLVEFRV-PADGLIEVGAEISAEHFLEGQKVDVTGTSIGKGF 121 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 122 AGAMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 181 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D RGLI++KG VPG+ K W+ V+D+ K Sbjct: 182 KTDADRGLIMIKGAVPGS-KGGWVTVKDAVKKKAP 215 >gi|326388197|ref|ZP_08209800.1| 50S ribosomal protein L3 [Novosphingobium nitrogenifigens DSM 19370] gi|326207363|gb|EGD58177.1| 50S ribosomal protein L3 [Novosphingobium nitrogenifigens DSM 19370] Length = 241 Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats. Identities = 132/219 (60%), Positives = 168/219 (76%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR +PVTVL L++CQVV RT +++GY+A+Q+GAGEAK KN Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHVPVTVLSLEDCQVVSVRTAERDGYVALQLGAGEAKQKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP R F+ V K ++ EFRV DD +L VGS + S+F +GQLVD+TG T GKGF Sbjct: 61 VAKPQREHFAKAEVPLKAEVAEFRV-ADDAVLEVGSTIAASHFAIGQLVDITGHTQGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG + T +NLE+V Sbjct: 120 AGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRQRTQQNLEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 DD RGLI VKG VPG+ KN W+LVRD+ K + + Sbjct: 180 RTDDARGLIFVKGSVPGS-KNGWLLVRDAVKVNRHAEAP 217 >gi|110634030|ref|YP_674238.1| 50S ribosomal protein L3 [Mesorhizobium sp. BNC1] gi|122965958|sp|Q11HQ2|RL3_MESSB RecName: Full=50S ribosomal protein L3 gi|110285014|gb|ABG63073.1| LSU ribosomal protein L3P [Chelativorans sp. BNC1] Length = 242 Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats. Identities = 137/220 (62%), Positives = 168/220 (76%), Gaps = 2/220 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G IPVTVL ++NCQVV RT +KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKIGMTRVYNETGEHIPVTVLRMENCQVVAQRTEEKNGYTAVQLGVGLAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK +RG F++ +V PK K+ EFRV + +LL VG+ + +F GQ VDVTG +IGKGF Sbjct: 61 TSKALRGHFAAASVEPKAKVAEFRVSPE-NLLDVGAEITADHFVPGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G MKRHNFGG RATHG S+SHR+HGSTG RQDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 120 QGVMKRHNFGGGRATHGNSVSHRTHGSTGQRQDPGKVFKGKKMAGHMGDRRVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220 S D +RGLILV+G VPG+ K SWI+VRD+ K+ + + + Sbjct: 180 STDTERGLILVRGAVPGS-KGSWIMVRDAVKAPLPKEAPL 218 >gi|90409445|ref|ZP_01217509.1| ribosomal protein L3 [Psychromonas sp. CNPT3] gi|90309447|gb|EAS37668.1| ribosomal protein L3 [Psychromonas sp. CNPT3] Length = 212 Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats. Identities = 103/213 (48%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTVL +V +TLD +GY A+QV G K Sbjct: 1 MTIGLVGRKIGMTRIFTEDGVSIPVTVLECTPNRVTQVKTLDTDGYQAIQVTTGAKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP G F+ V + L+EFR+++++ + VG+ S F VDVTG + GKG Sbjct: 61 VTKPEAGHFAKAGVEAGRGLWEFRLEENEGTDIKVGAELSVELFNDITKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHRS+GS G Q PGRVFK KKM+G MG RVT +NLEV Sbjct: 121 FQGGIKRWNFSMQDATHGNSLSHRSNGSIGMCQTPGRVFKGKKMSGHMGAERVTTQNLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD KR L+LVKG VPGA KN + ++ + K+ Sbjct: 181 VRVDVKRNLLLVKGAVPGA-KNGNVFIKPAVKA 212 >gi|260772096|ref|ZP_05881013.1| LSU ribosomal protein L3p (L3e) [Vibrio metschnikovii CIP 69.14] gi|260612963|gb|EEX38165.1| LSU ribosomal protein L3p (L3e) [Vibrio metschnikovii CIP 69.14] Length = 209 Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats. Identities = 98/210 (46%), Positives = 135/210 (64%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V RK+GMT V+ EG IPVTV+ ++ +V +TL+ +GY A+QV AG K V+ Sbjct: 2 IGLVGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGTKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELTVELFNEIKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPGA + ++V+ + K+ Sbjct: 181 DAERNLLLIKGAVPGA-TGANVIVKPAIKA 209 >gi|156973051|ref|YP_001443958.1| 50S ribosomal protein L3 [Vibrio harveyi ATCC BAA-1116] gi|269959691|ref|ZP_06174071.1| 50S ribosomal protein L3 [Vibrio harveyi 1DA3] gi|166234607|sp|A7MWI3|RL3_VIBHB RecName: Full=50S ribosomal protein L3 gi|156524645|gb|ABU69731.1| hypothetical protein VIBHAR_00730 [Vibrio harveyi ATCC BAA-1116] gi|269835614|gb|EEZ89693.1| 50S ribosomal protein L3 [Vibrio harveyi 1DA3] Length = 209 Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats. Identities = 94/210 (44%), Positives = 134/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV AG K V+ Sbjct: 2 IGLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF G Sbjct: 62 KAEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGAELTVELFNETKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPG+ + ++V+ + K+ Sbjct: 181 DAERNLLLIKGAVPGSTGGN-VIVKPAVKA 209 >gi|222529730|ref|YP_002573612.1| 50S ribosomal protein L3 [Caldicellulosiruptor bescii DSM 6725] gi|254803649|sp|B9MKI1|RL3_ANATD RecName: Full=50S ribosomal protein L3 gi|222456577|gb|ACM60839.1| ribosomal protein L3 [Caldicellulosiruptor bescii DSM 6725] Length = 210 Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats. Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT +++ GR IPVTV+ C VV +T++K+GY A+QVG + K Sbjct: 1 MTKGILGKKIGMTQIFDEAGRAIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+RG F+ V PK+ L E R+ KD D VG F G+ VDVTG++ KGF Sbjct: 61 LNKPLRGHFAKHGVKPKRFLRELRL-KDADKYEVGQEIRVDIFQPGEKVDVTGISKAKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH +HG S+ HR GS G P R F KKM GRMGG RVTV NL+VV Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD R L+LVKG VPG KNS +++RDS KS Sbjct: 179 KVDPDRNLLLVKGSVPG-NKNSLLIIRDSVKS 209 >gi|312622045|ref|YP_004023658.1| 50S ribosomal protein l3 [Caldicellulosiruptor kronotskyensis 2002] gi|312202512|gb|ADQ45839.1| 50S ribosomal protein L3 [Caldicellulosiruptor kronotskyensis 2002] Length = 210 Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats. Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT +++ GR IPVTV+ C VV +T++K+GY A+QVG + K Sbjct: 1 MTKGILGKKIGMTQIFDEAGRAIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+RG F+ V PK+ L E R+ KD D VG F G+ VDVTG++ KGF Sbjct: 61 LNKPLRGHFAKHGVKPKRFLRELRL-KDADKYEVGQEIRVDIFQPGERVDVTGISKAKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH +HG S+ HR GS G P R F KKM GRMGG RVTV NL+VV Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD R L+LVKG VPG KNS +++RDS KS Sbjct: 179 KVDPDRNLLLVKGSVPG-NKNSLLIIRDSVKS 209 >gi|298500580|ref|ZP_07010384.1| LSU ribosomal protein L3 [Vibrio cholerae MAK 757] gi|297540749|gb|EFH76806.1| LSU ribosomal protein L3 [Vibrio cholerae MAK 757] Length = 209 Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats. Identities = 95/208 (45%), Positives = 133/208 (63%), Gaps = 2/208 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV G K V+KP Sbjct: 4 LIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGSKKANRVTKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF GA+ Sbjct: 64 EAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQGAV 122 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD Sbjct: 123 KRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVDA 182 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPGA + ++V+ + K+ Sbjct: 183 ERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|159042832|ref|YP_001531626.1| 50S ribosomal protein L3 [Dinoroseobacter shibae DFL 12] gi|226725165|sp|A8LM48|RL3_DINSH RecName: Full=50S ribosomal protein L3 gi|157910592|gb|ABV92025.1| 50S ribosomal protein L3 [Dinoroseobacter shibae DFL 12] Length = 279 Score = 277 bits (710), Expect = 5e-73, Method: Composition-based stats. Identities = 125/215 (58%), Positives = 163/215 (75%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT ++ +G+++PVTVL LD QVV RT +K+GY AVQ+GAG AK K Sbjct: 1 MRSGVIAKKVGMTRLFMEDGKQVPVTVLQLDKLQVVAQRTAEKDGYSAVQLGAGTAKAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +K MRG F++ +V PK+K+ EFRV + +L+ VG + ++ GQ VDV+G +IGKGF Sbjct: 61 TTKAMRGHFAAASVEPKRKVAEFRVAPE-NLINVGEEITADHYFEGQYVDVSGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D RGLI++KG VPG+ K W+ ++D+ K V Sbjct: 180 RTDADRGLIMIKGAVPGS-KGGWVTIKDAVKKPVP 213 >gi|302871498|ref|YP_003840134.1| 50S ribosomal protein L3 [Caldicellulosiruptor obsidiansis OB47] gi|302574357|gb|ADL42148.1| 50S ribosomal protein L3 [Caldicellulosiruptor obsidiansis OB47] Length = 210 Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats. Identities = 103/212 (48%), Positives = 133/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V++ EGR IPVTV+ C VV +T++K+GY A+QVG + K Sbjct: 1 MTKGILGKKIGMTQVFDEEGRVIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+RG F+ V PK+ L E R+ KD D VG F G+ VDVTG++ KGF Sbjct: 61 LNKPLRGHFAKHGVKPKRYLRELRL-KDADKYEVGQEIRVDIFQPGERVDVTGISKAKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH +HG S+ HR GS G P R F KKM GRMGG RVTV NL+VV Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD R L+LVKG VPG KNS +++RDS KS Sbjct: 179 KVDPDRNLLLVKGSVPG-NKNSLLIIRDSVKS 209 >gi|312127226|ref|YP_003992100.1| 50S ribosomal protein l3 [Caldicellulosiruptor hydrothermalis 108] gi|311777245|gb|ADQ06731.1| 50S ribosomal protein L3 [Caldicellulosiruptor hydrothermalis 108] Length = 210 Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats. Identities = 102/212 (48%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V++ GR IPVTV+ C VV +T++K+GY A+QVG + K Sbjct: 1 MTKGILGKKIGMTQVFDEAGRAIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+RG F+ V PK+ L E R+ KD D VG F G+ VDVTG++ KGF Sbjct: 61 LNKPLRGHFAKHGVKPKRFLRELRL-KDADKYEVGQEIRVDIFQPGERVDVTGISKAKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH +HG S+ HR GS G P R F KKM GRMGG RVTV NL+VV Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD R L+LVKG VPG KNS +++RDS KS Sbjct: 179 KVDPDRNLLLVKGSVPG-NKNSLLIIRDSVKS 209 >gi|312884703|ref|ZP_07744404.1| 50S ribosomal protein L3 [Vibrio caribbenthicus ATCC BAA-2122] gi|309367616|gb|EFP95167.1| 50S ribosomal protein L3 [Vibrio caribbenthicus ATCC BAA-2122] Length = 209 Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats. Identities = 96/210 (45%), Positives = 134/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+ EG IPVTV+ ++ +V +TL+ +GY A+QV G K V+ Sbjct: 2 IGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNDTKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPG+ + ++V+ + K+ Sbjct: 181 DAERNLLLIKGAVPGSTGGN-VIVKPAVKA 209 >gi|148554274|ref|YP_001261856.1| 50S ribosomal protein L3 [Sphingomonas wittichii RW1] gi|148499464|gb|ABQ67718.1| LSU ribosomal protein L3P [Sphingomonas wittichii RW1] Length = 317 Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats. Identities = 125/215 (58%), Positives = 156/215 (72%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR +PVTVL L+N QVV R D++GY+AVQ+GAG AK KN Sbjct: 67 MRTGVIAKKMGMTRLFQEDGRHVPVTVLALENVQVVARREQDRDGYVAVQLGAGSAKPKN 126 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP RG F V PK + EFRV +D LL VG+ S ++ GQ VD+ G T GKGF Sbjct: 127 LTKPERGHFGKAEVEPKAFVAEFRVSED-GLLDVGAEISADHYVAGQFVDIQGSTQGKGF 185 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR FGGLRATHGVS+SHRS GSTG RQDPG+VFKNKKMAG MG T +NLE+V Sbjct: 186 AGGMKRWGFGGLRATHGVSVSHRSLGSTGQRQDPGKVFKNKKMAGHMGDKNRTQQNLEIV 245 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D +RGL+ VKG VPG+ K W+LV+DS K A Sbjct: 246 QTDAERGLLFVKGSVPGS-KGGWLLVKDSVKIAAP 279 >gi|254506374|ref|ZP_05118516.1| ribosomal protein L3 [Vibrio parahaemolyticus 16] gi|219550548|gb|EED27531.1| ribosomal protein L3 [Vibrio parahaemolyticus 16] Length = 209 Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats. Identities = 98/210 (46%), Positives = 135/210 (64%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+ EG IPVTV+ ++ +V +TL+ +GY A+QV G K VS Sbjct: 2 IGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGAKKANRVS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGAELTVELFNETKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF ATHG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 AVKRWNFRTQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPGA + ++V+ + K+ Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|209693924|ref|YP_002261852.1| 50S ribosomal protein L3 [Aliivibrio salmonicida LFI1238] gi|226725124|sp|B6EPS5|RL3_ALISL RecName: Full=50S ribosomal protein L3 gi|208007875|emb|CAQ78005.1| 50S ribosomal protein L3 [Aliivibrio salmonicida LFI1238] Length = 209 Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V RK+GMT ++ EG IPVTV+ ++ +V +T++ +GY A+QV G K VS Sbjct: 2 IGLVGRKVGMTRIFTEEGVSIPVTVVEVEVNRVSQVKTVETDGYNAIQVTCGSKKANRVS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR++ ++ VG+ S F + VDVTG + GKGF G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLENGEEFT-VGAELSVEIFNEIKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG R T +NLE+V V Sbjct: 121 AIKRWNFATQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERCTTQNLEIVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPG+ + ++V+ + K+ Sbjct: 181 DAERNLLLIKGAVPGSTGGN-VIVKPAVKA 209 >gi|90415162|ref|ZP_01223111.1| 50S ribosomal protein L3 [Photobacterium profundum 3TCK] gi|90323709|gb|EAS40341.1| 50S ribosomal protein L3 [Photobacterium profundum 3TCK] Length = 209 Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats. Identities = 93/210 (44%), Positives = 134/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT ++ EG IPVTV+ ++ +V ++L+ +GY A+Q+ G K VS Sbjct: 2 IGLIGRKVGMTRIFTEEGISIPVTVVEVEANRVTQVKSLETDGYNAIQITTGTKKANRVS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF G Sbjct: 62 KPAAGHFAKAGVEAGRGLWEFRLENGEEFT-VGAELNVELFNEVKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 AIKRWNFSTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPG+ + ++V+ + K+ Sbjct: 181 DAERNLLLIKGAVPGSIGGN-VIVKPAVKA 209 >gi|152998271|ref|YP_001343106.1| 50S ribosomal protein L3 [Marinomonas sp. MWYL1] gi|189042850|sp|A6W392|RL3_MARMS RecName: Full=50S ribosomal protein L3 gi|150839195|gb|ABR73171.1| ribosomal protein L3 [Marinomonas sp. MWYL1] Length = 212 Score = 277 bits (708), Expect = 9e-73, Method: Composition-based stats. Identities = 96/212 (45%), Positives = 135/212 (63%), Gaps = 1/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M +V RK GMT ++ +G +PVTV+ ++ +V +T + +GY AVQV G + Sbjct: 1 MAIQLVGRKAGMTRIFTEDGVSVPVTVIEVEPNRVTQVKTAETDGYQAVQVTVGSRRSSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G ++ NV + L+EFR+ D+ + VG + + F Q+VDVTG + GKGF Sbjct: 61 VNKAAAGHYAKANVEAGRGLWEFRLAGDEKEINVGDELTVADFESIQMVDVTGQSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRHNF ATHG S+SHR+ GS G Q PGRV+K KKMAG MG +VT ++LEVV Sbjct: 121 QGAIKRHNFSMQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGHMGAAQVTTQSLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R LILVKG VPGA N ++++ + K+ Sbjct: 181 RVDTERNLILVKGAVPGAV-NGDVILQSAVKA 211 >gi|84394648|ref|ZP_00993340.1| 50S ribosomal protein L3 [Vibrio splendidus 12B01] gi|86148881|ref|ZP_01067133.1| 50S ribosomal protein L3 [Vibrio sp. MED222] gi|218710749|ref|YP_002418370.1| 50S ribosomal protein L3 [Vibrio splendidus LGP32] gi|254803702|sp|B7VLF7|RL3_VIBSL RecName: Full=50S ribosomal protein L3 gi|84374730|gb|EAP91685.1| 50S ribosomal protein L3 [Vibrio splendidus 12B01] gi|85833333|gb|EAQ51539.1| 50S ribosomal protein L3 [Vibrio sp. MED222] gi|218323768|emb|CAV20125.1| 50S ribosomal protein L3 [Vibrio splendidus LGP32] Length = 209 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 134/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V RK+GMT V+ EG IPVTV+ ++ ++ +TL+ +GY A+QV G K V+ Sbjct: 2 IGLVGRKVGMTRVFTEEGVSIPVTVVEVEANRISQVKTLETDGYAAIQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELNVELFNEIKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 AIKRWNFSTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPG+ + ++V+ + K+ Sbjct: 181 DAERNLLLIKGAVPGSTGGN-VIVKPAVKA 209 >gi|90417569|ref|ZP_01225487.1| Ribosomal protein L3 [marine gamma proteobacterium HTCC2207] gi|90330590|gb|EAS45886.1| Ribosomal protein L3 [marine gamma proteobacterium HTCC2207] Length = 211 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 94/212 (44%), Positives = 128/212 (60%), Gaps = 1/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT V+ +G IPVTV+ V ++++ +GY A+Q+ G K Sbjct: 1 MSIGIVGRKCGMTRVFTEDGVSIPVTVVEATPNHVTQIKSVETDGYSAIQITTGSRKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK G ++ V + +EFR + D VG + F GQ+VDVTG + GKGF Sbjct: 61 VSKAQAGHYAKAGVEAGRGQWEFRTEGSSDDFAVGGSLTVERFEAGQMVDVTGTSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG+MG +VT +NLE+V Sbjct: 121 QGGVKRWNFAMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNAQVTTQNLEIV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA + + VR + K+ Sbjct: 181 RVDAERNLLLIKGAVPGAPGGNVV-VRPAVKA 211 >gi|254512299|ref|ZP_05124366.1| ribosomal protein L3 [Rhodobacteraceae bacterium KLH11] gi|221536010|gb|EEE38998.1| ribosomal protein L3 [Rhodobacteraceae bacterium KLH11] Length = 241 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 130/215 (60%), Positives = 161/215 (74%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ +G++IPVTVLHLDN QVV RT DK+GY AVQ+GAG AK K Sbjct: 1 MRSGIIAKKVGMTRLFMEDGKQIPVTVLHLDNLQVVAQRTADKDGYTAVQLGAGAAKAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG +++ V PK+KL EFRV +D L+ VG+ S +F GQ VDV+G +IGKGF Sbjct: 61 TSKAMRGHYAAAKVEPKRKLAEFRVSED-GLIDVGAEISAEHFLEGQKVDVSGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D R L+ +KG VPG K+ W+ V+D+ K Sbjct: 180 KTDADRNLVFIKGAVPGP-KSGWVTVKDAVKKKAP 213 >gi|323492119|ref|ZP_08097281.1| 50S ribosomal protein L3 [Vibrio brasiliensis LMG 20546] gi|323313680|gb|EGA66782.1| 50S ribosomal protein L3 [Vibrio brasiliensis LMG 20546] Length = 209 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 96/210 (45%), Positives = 134/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+ EG IPVTV+ ++ +V +TL+ +GY A+QV G K VS Sbjct: 2 IGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGAKKANRVS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGAELTVELFNDTKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPG+ + ++V+ + K+ Sbjct: 181 DAERNLLLIKGAVPGSTGGN-VIVKPAVKA 209 >gi|88801219|ref|ZP_01116760.1| 50S ribosomal protein L3 [Reinekea sp. MED297] gi|88776057|gb|EAR07291.1| 50S ribosomal protein L3 [Reinekea sp. MED297] Length = 210 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 98/212 (46%), Positives = 128/212 (60%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK GMT V+ +G +PVTVL ++ +V +T+D +GY AVQ+ AG + Sbjct: 1 MSIGLIGRKAGMTRVFTEDGVSVPVTVLEIEPNRVAQVKTVDTDGYAAVQLTAGNKRANK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SK G F+ NV EF V D G + F GQ VDVTG + GKGF Sbjct: 61 LSKSQAGHFAKANVEAGVLTREFPV-ADVSEYETGKELTVELFEAGQKVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GA+KRHNF ATHG S+SHR+ GS G Q PGRV+K KKMAG MG R T ++LEVV Sbjct: 120 AGAIKRHNFRTQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGHMGAERHTTQSLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD R L+L+KG VPGA S ++V+ + K Sbjct: 180 RVDTDRNLLLIKGAVPGA-TGSHVVVQSAVKG 210 >gi|261250417|ref|ZP_05942992.1| LSU ribosomal protein L3p (L3e) [Vibrio orientalis CIP 102891] gi|260938986|gb|EEX94973.1| LSU ribosomal protein L3p (L3e) [Vibrio orientalis CIP 102891] Length = 209 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 98/210 (46%), Positives = 134/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+ EG IPVTV+ ++ +V +TLD +GY A+QV G K VS Sbjct: 2 IGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLDTDGYAAIQVTTGAKKANRVS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGAELTVELFNDTKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPGA + ++V+ + K+ Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|254492312|ref|ZP_05105485.1| ribosomal protein L3 [Methylophaga thiooxidans DMS010] gi|224462484|gb|EEF78760.1| ribosomal protein L3 [Methylophaga thiooxydans DMS010] Length = 210 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 96/212 (45%), Positives = 137/212 (64%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK GMT V++ +G PVTV+ ++ +V +T+D +GY A+QV GE K Sbjct: 1 MTIGLIGRKRGMTRVFSEDGVSTPVTVIEVEPNRVSQLKTVDTDGYNAIQVTVGERKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP G F+ + +K+ EFRV++ L VG+ F GQ +DV+G+T GKGF Sbjct: 61 VTKPEAGHFAKAQAAAGRKVAEFRVEE-VSELEVGAELKVDLFENGQQIDVSGITKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR+ F G ATHG S+SHR+ GS G Q PGRVFK KKMAG MG + T++NL +V Sbjct: 120 AGVVKRYGFRGGDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGDKKRTLQNLSIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA S +++R + K+ Sbjct: 180 KVDAERNLLLIKGSVPGA-TGSDVIIRPAVKA 210 >gi|27364215|ref|NP_759743.1| 50S ribosomal protein L3 [Vibrio vulnificus CMCP6] gi|320157601|ref|YP_004189980.1| 50S ribosomal protein L3p (L3e) [Vibrio vulnificus MO6-24/O] gi|42559633|sp|Q8DE39|RL3_VIBVU RecName: Full=50S ribosomal protein L3 gi|27360333|gb|AAO09270.1| LSU ribosomal protein L3p (L3e) [Vibrio vulnificus CMCP6] gi|319932913|gb|ADV87777.1| LSU ribosomal protein L3p (L3e) [Vibrio vulnificus MO6-24/O] Length = 209 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 96/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+ EG IPVTV+ ++ +V +TL+ +GY A+QV AG K V+ Sbjct: 2 IGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVAQVKTLETDGYAAIQVTAGTKKANRVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF G Sbjct: 62 KAEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 TVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPGA + ++V+ + K+ Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|260425273|ref|ZP_05779253.1| 50S ribosomal protein L3 [Citreicella sp. SE45] gi|260423213|gb|EEX16463.1| 50S ribosomal protein L3 [Citreicella sp. SE45] Length = 280 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 128/215 (59%), Positives = 162/215 (75%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSGV+A+K+GMT ++ +G++IPVTVL LD CQVV RT DK+GY AVQ+GAG K KN Sbjct: 2 LRSGVIAKKVGMTRLFMEDGKQIPVTVLQLDGCQVVAQRTADKDGYTAVQLGAGSIKAKN 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS PMRG F+ V PK+K+ EFRV + +L+ VG + ++ GQ VDV+G TIGKGF Sbjct: 62 VSNPMRGHFAVAKVEPKRKIAEFRVDAE-NLIRVGEEITADHYFEGQFVDVSGTTIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D RG+I++KG VPG+ K W+ ++D+ K Sbjct: 181 KTDADRGIIMIKGAVPGS-KGGWVTIKDAVKKPFP 214 >gi|94500993|ref|ZP_01307518.1| 50S ribosomal protein L3 [Oceanobacter sp. RED65] gi|94426933|gb|EAT11916.1| 50S ribosomal protein L3 [Oceanobacter sp. RED65] Length = 212 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 98/212 (46%), Positives = 129/212 (60%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V +K GMT V+ +G +PVTV+ + +V +T + +GY AVQV AG K Sbjct: 1 MALGLVGKKAGMTRVFTEDGASVPVTVIEVTPNRVTQVKTTETDGYNAVQVTAGSRKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK G F+ NV L EFR+++ D +G + F GQ+VDVTG + GKGF Sbjct: 61 VSKAEAGHFAKANVEAGDSLLEFRIEEVADF-NIGDELTVERFEAGQVVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF ATHG S+SHR+ GS G Q PGRV+K KKMAG MG RVT +NLE+V Sbjct: 120 QGGVKRWNFSTQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGHMGAARVTTQNLEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + LILVKG +PGA I ++ + K+ Sbjct: 180 RVDAESNLILVKGALPGATGGQLI-IKPAVKA 210 >gi|20808660|ref|NP_623831.1| 50S ribosomal protein L3 [Thermoanaerobacter tengcongensis MB4] gi|42559656|sp|Q8R7V4|RL3_THETN RecName: Full=50S ribosomal protein L3 gi|20517294|gb|AAM25435.1| Ribosomal protein L3 [Thermoanaerobacter tengcongensis MB4] Length = 210 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 99/212 (46%), Positives = 135/212 (63%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +K GMT +++ +G IPVTV+ C VV +T++K+GY A+QVG G+ K Sbjct: 1 MKKGILGKKHGMTQIFDEKGEVIPVTVIEAGPCVVVQKKTVEKDGYNAIQVGFGDVSEKK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+ G F VSPK+ L EFR+ D VG+ F G VDVTG++ GKGF Sbjct: 61 LNKPLLGHFKKAGVSPKRYLREFRLD-DISGYEVGTEIKVDIFKPGDRVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR+ +HG S HR GS G DPGR FK KKM GRMG +RVT++NLEVV Sbjct: 120 AGVIKRYGARRGPMSHG-SKYHRRVGSMGATTDPGRTFKGKKMPGRMGSDRVTIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + L++VKG VPG K S +++RDS KS Sbjct: 179 KVDPELNLLVVKGSVPGP-KGSLLIIRDSVKS 209 >gi|54307541|ref|YP_128561.1| 50S ribosomal protein L3 [Photobacterium profundum SS9] gi|81828878|sp|Q6LVB6|RL3_PHOPR RecName: Full=50S ribosomal protein L3 gi|46911961|emb|CAG18759.1| putative ribosomal protein L3 [Photobacterium profundum SS9] Length = 209 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 92/210 (43%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT ++ EG IPVTV+ ++ +V ++L+ +GY A+Q+ G K VS Sbjct: 2 IGLIGRKVGMTRIFTEEGISIPVTVVEVEANRVTQVKSLETDGYNAIQITTGTKKANRVS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF G Sbjct: 62 KPAAGHFAKAGVEAGRGLWEFRLENGEEF-AVGAELNVELFNEVKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 VIKRWNFSTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPG+ + ++V+ + K+ Sbjct: 181 DAERNLLLIKGAVPGSIGGN-VIVKPAVKA 209 >gi|315122818|ref|YP_004063307.1| 50S ribosomal protein L3 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496220|gb|ADR52819.1| 50S ribosomal protein L3 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 221 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 188/221 (85%), Positives = 206/221 (93%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR GVVARKLGMTCVYN+EG+R+PVTVLHLDNCQVV HRTL KNGYMAVQVGAG+AK+KN Sbjct: 1 MRPGVVARKLGMTCVYNLEGKRLPVTVLHLDNCQVVAHRTLQKNGYMAVQVGAGDAKIKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKPMRGFFSSVN SPKK+L EFRVQK+D+LL +GSV SPS+F VGQLVDVTG+TIGKGF Sbjct: 61 VSKPMRGFFSSVNASPKKRLSEFRVQKEDELLQIGSVLSPSHFNVGQLVDVTGVTIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNF GLRA+HGVSISHRS GSTGCRQDPGRVFKNKKMAG MGGNR+TVKNLEV+ Sbjct: 121 AGAMKRHNFAGLRASHGVSISHRSAGSTGCRQDPGRVFKNKKMAGHMGGNRITVKNLEVI 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 S+DDKRGLI VKGCVPGAK +SWILVRDSFKSA N KGKV+ Sbjct: 181 SIDDKRGLIFVKGCVPGAKNDSWILVRDSFKSAANYKGKVA 221 >gi|302388088|ref|YP_003823910.1| 50S ribosomal protein L3 [Clostridium saccharolyticum WM1] gi|302198716|gb|ADL06287.1| 50S ribosomal protein L3 [Clostridium saccharolyticum WM1] Length = 211 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 91/213 (42%), Positives = 128/213 (60%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++A K+GMT ++N G PVTVL C V +T++ +GY AVQVG + + K Sbjct: 1 MKKGILATKVGMTQIFNENGVLTPVTVLQAGPCVVTQVKTVENDGYSAVQVGYVDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKP++G F VS K+ + EF+++ D V F G +D T ++ GKGF Sbjct: 61 VSKPIKGHFDKAGVSYKRYVREFKLEN-ADQYSVKDEIKAEIFAAGDKIDATAISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G DP +VFK KKM G+MG +VT++NLE+V Sbjct: 120 QGAIKRHGQSRGPMAHG-SKFHRHAGSNGACSDPSKVFKGKKMPGQMGNKKVTIQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + LILVKG VPG KK S + ++++ K++ Sbjct: 179 RVDAENNLILVKGAVPGPKK-SLVTIKETVKAS 210 >gi|172087649|ref|YP_203618.2| 50S ribosomal subunit protein L3 [Vibrio fischeri ES114] gi|197333952|ref|YP_002154996.1| 50S ribosomal protein L3 [Vibrio fischeri MJ11] gi|226730588|sp|B5FG09|RL3_VIBFM RecName: Full=50S ribosomal protein L3 gi|171902244|gb|AAW84730.2| 50S ribosomal subunit protein L3 [Vibrio fischeri ES114] gi|197315442|gb|ACH64889.1| 50S ribosomal protein L3 [Vibrio fischeri MJ11] Length = 209 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 134/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V RK+GMT ++ EG IPVTV+ ++ +V +T++ +GY A+QV G K VS Sbjct: 2 IGLVGRKVGMTRIFTEEGVSIPVTVVEVEANRVSQVKTVETDGYNAIQVTCGSKKANRVS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGAELTVEVFNEIKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPG+ + ++V+ + K+ Sbjct: 181 DAERNLLLIKGAVPGSTGGN-VIVKPAVKA 209 >gi|254516911|ref|ZP_05128969.1| ribosomal protein L3 [gamma proteobacterium NOR5-3] gi|219674416|gb|EED30784.1| ribosomal protein L3 [gamma proteobacterium NOR5-3] Length = 231 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 97/212 (45%), Positives = 128/212 (60%), Gaps = 1/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT V+ +G IPVTV+ + +V + D +GY ++QV AG K Sbjct: 21 MTIGLVGRKSGMTRVFTEDGASIPVTVVEVSPNRVTQIKENDSDGYRSIQVTAGSRKAAK 80 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK G F+ V + L+EFR+ +D+ VG+ + F GQ VDV G + GKGF Sbjct: 81 VSKSEAGLFAKAGVEAGRGLWEFRLSAEDESFEVGAELTVERFEEGQKVDVAGKSKGKGF 140 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF ATHG S+SHR+ GS G Q PGRVFK KKM+G+MG VTV+ LE+V Sbjct: 141 QGVIKRWNFSMQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMSGQMGNANVTVQGLEIV 200 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA + VR + K Sbjct: 201 RVDAERNLLLIKGAVPGAPGGD-VFVRPAVKG 231 >gi|255282605|ref|ZP_05347160.1| 50S ribosomal protein L3 [Bryantella formatexigens DSM 14469] gi|255266898|gb|EET60103.1| 50S ribosomal protein L3 [Bryantella formatexigens DSM 14469] Length = 211 Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 90/213 (42%), Positives = 127/213 (59%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G PVTVL C V +T++ +GY AVQVG + + K Sbjct: 1 MKKAILATKVGMTQIFNDDGVLTPVTVLQAGPCVVTQIKTVENDGYSAVQVGYVDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F VS K+ L EF++ ++ V F G +D T ++ GKGF Sbjct: 61 VNKPLKGHFDKAGVSYKRYLREFKLDNAEE-YQVAQEIKADIFAAGDKIDATAISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G DP +VF+ KKMAG MG RVT++NLEVV Sbjct: 120 QGAIKRHGLHRGPMAHG-SKYHRHAGSNGACSDPSKVFRGKKMAGHMGHKRVTIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + L+LVKG VPG KK S + ++++ K+ Sbjct: 179 RVDAENNLLLVKGAVPGPKK-SLVSIKETVKAG 210 >gi|148982483|ref|ZP_01816779.1| 50S ribosomal protein L3 [Vibrionales bacterium SWAT-3] gi|145960448|gb|EDK25827.1| 50S ribosomal protein L3 [Vibrionales bacterium SWAT-3] Length = 209 Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 134/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V RK+GMT V+ EG IPVTV+ ++ ++ +TL+ +GY A+QV G K V+ Sbjct: 2 IGLVGRKVGMTRVFTEEGVSIPVTVVEVEANRISQVKTLENDGYAAIQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELNVELFNEIKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 AVKRWNFSTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPG+ + ++V+ + K+ Sbjct: 181 DAERNLLLIKGAVPGSTGGN-VIVKPAVKA 209 >gi|24981833|gb|AAN66084.1|AE016238_2 ribosomal protein L3 [Pseudomonas putida KT2440] Length = 222 Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 100/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GV+ RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 12 MTIGVIGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 71 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + ++EFR+++ D G + FT GQLVDVTG + GKGF Sbjct: 72 VTAAQAGHFAKANVAAGRGVWEFRLEEGD--FQAGDLIKAELFTAGQLVDVTGQSKGKGF 129 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 130 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 189 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA + VR + K+ Sbjct: 190 RVDAERNLLLIKGAVPGATGGDVV-VRPAVKA 220 >gi|146278568|ref|YP_001168727.1| 50S ribosomal protein L3 [Rhodobacter sphaeroides ATCC 17025] gi|145556809|gb|ABP71422.1| LSU ribosomal protein L3P [Rhodobacter sphaeroides ATCC 17025] Length = 239 Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 128/218 (58%), Positives = 162/218 (74%), Gaps = 2/218 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT ++ +G+++PVTVL LD+ QVV RT +K+GY AVQ+GAG AK K Sbjct: 1 MRSGVIAKKLGMTRLFLEDGKQVPVTVLQLDSLQVVAQRTAEKDGYTAVQLGAGAAKAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S MRG F+ NV PK+K+ EFRV D L+ VG+ + ++ GQ VD+ G +IGKGF Sbjct: 61 TSAGMRGHFAKANVEPKRKIAEFRVTPDC-LIDVGAEITADHYFAGQFVDIAGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 D RGLI+VKG VPG+ K W+ ++D+ K V + Sbjct: 180 RTDSDRGLIMVKGAVPGS-KGGWVTIKDAVKKPVPEQA 216 >gi|37678559|ref|NP_933168.1| 50S ribosomal protein L3 [Vibrio vulnificus YJ016] gi|42559591|sp|Q7MPI8|RL3_VIBVY RecName: Full=50S ribosomal protein L3 gi|37197299|dbj|BAC93139.1| ribosomal protein L3 [Vibrio vulnificus YJ016] Length = 209 Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+ EG IPVTV+ ++ ++ +TL+ +GY A+QV AG K V+ Sbjct: 2 IGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRIAQVKTLETDGYAAIQVTAGTKKANRVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF G Sbjct: 62 KAEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 TVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPGA + ++V+ + K+ Sbjct: 181 DAERNLLLIKGAVPGATGGN-VIVKPAVKA 209 >gi|149203511|ref|ZP_01880481.1| 50S ribosomal protein L3 [Roseovarius sp. TM1035] gi|149143344|gb|EDM31383.1| 50S ribosomal protein L3 [Roseovarius sp. TM1035] Length = 280 Score = 275 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 122/215 (56%), Positives = 160/215 (74%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSGV+A+K+GMT ++ +G+++PVTVL LD QVV RT +K+GY AVQ+GAG AK K Sbjct: 2 LRSGVIAKKVGMTRLFLEDGKQVPVTVLQLDKLQVVAQRTPEKDGYTAVQLGAGTAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++ MRG F++ V PK+K+ EFRV + L+ VG + ++ GQ VDV+G +IGKGF Sbjct: 62 TTQAMRGHFAAAKVEPKRKIAEFRVAPE-ALINVGEEITADHYFEGQFVDVSGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D RGLI++KG VPG+ K W+ ++D+ K Sbjct: 181 KTDADRGLIMIKGAVPGS-KGGWVTIKDAVKKPFP 214 >gi|103488295|ref|YP_617856.1| 50S ribosomal protein L3 [Sphingopyxis alaskensis RB2256] gi|123078063|sp|Q1GP99|RL3_SPHAL RecName: Full=50S ribosomal protein L3 gi|98978372|gb|ABF54523.1| LSU ribosomal protein L3P [Sphingopyxis alaskensis RB2256] Length = 257 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 128/219 (58%), Positives = 161/219 (73%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR +PVTVL L+ CQVV R +++GY+AVQ+GAG AK KN Sbjct: 1 MRTGVIAKKMGMTRLFQDDGRHVPVTVLSLEGCQVVSVRDKERDGYVAVQLGAGTAKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP RG + V PK KL EFRV DD L VG+ S +F GQ+VD+ G+T GKGF Sbjct: 61 VAKPQRGAYGKAEVEPKAKLVEFRV-ADDATLDVGAELSADHFVAGQMVDIQGVTQGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG T +NLE+V Sbjct: 120 AGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGARNRTQQNLEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 D +RGL+ VKG VPG+ K W+LVRD+ K + + Sbjct: 180 RTDAERGLLFVKGSVPGS-KGGWLLVRDAVKLPRHPEAP 217 >gi|313904952|ref|ZP_07838323.1| 50S ribosomal protein L3 [Eubacterium cellulosolvens 6] gi|313470209|gb|EFR65540.1| 50S ribosomal protein L3 [Eubacterium cellulosolvens 6] Length = 211 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 92/212 (43%), Positives = 121/212 (57%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT +++ G IPVTVL C V +T + +GY AVQVG GE + K Sbjct: 1 MKKAILATKVGMTQIFDETGASIPVTVLQAGPCVVTQVKTEENDGYAAVQVGFGEIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G F V K+ L EFR + V F G +D T ++ GKGF Sbjct: 61 VNKPKKGQFDKAEVPVKRYLQEFRFDNAAE-YEVKQEIKADIFADGDHIDATAISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G DP +VFK K M G MG +VTV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGSCSDPSKVFKGKHMPGHMGHVKVTVQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + L+LVKG VPG KK S I +++S K+ Sbjct: 179 KVDAENNLLLVKGSVPGPKK-SLITIKESVKA 209 >gi|254237126|ref|ZP_04930449.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa C3719] gi|126169057|gb|EAZ54568.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa C3719] Length = 211 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 100/212 (47%), Positives = 136/212 (64%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV AGE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEVEPNRVTQFKTEETDGYRAVQVTAGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ NV+ + ++EFR+ ++ VG + F GQ+VDVTG + GKGF Sbjct: 61 VTKAQAGHFAKANVAAGRGVWEFRL--GEEQYAVGDQITVDLFQAGQMVDVTGESKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G +G RVTV++LE+V Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHLGAERVTVQSLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA ++VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGD-VIVRPAAKA 209 >gi|294675856|ref|YP_003576471.1| 50S ribosomal protein L3 [Rhodobacter capsulatus SB 1003] gi|294474676|gb|ADE84064.1| 50S ribosomal protein L3 [Rhodobacter capsulatus SB 1003] Length = 238 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 128/216 (59%), Positives = 164/216 (75%), Gaps = 2/216 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT ++ +G+++PVTVL LDN QVV RT++ +GY AVQ+GAGEAK K Sbjct: 1 MRSGVIAKKLGMTRLFLEDGKQVPVTVLLLDNLQVVAQRTVETDGYTAVQLGAGEAKAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + MRG F+ NV+PK+KL EFRV + +L+ VG+ S ++ GQ VD+ G +IGKGF Sbjct: 61 TTAAMRGHFAKANVAPKRKLCEFRVSPE-NLIDVGAEISAEHYLAGQHVDIAGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVS+SHRSHGSTG QDPG+VFK KKMAG +G RVT +NL+VV Sbjct: 120 AGAMKRHNFGGLRASHGVSVSHRSHGSTGQCQDPGKVFKGKKMAGHLGAARVTTQNLQVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D RGLI+VKG VPGA K W+ ++D+ K A Sbjct: 180 RTDAARGLIMVKGSVPGA-KGGWVTIKDAVKKAAPA 214 >gi|288957422|ref|YP_003447763.1| large subunit ribosomal protein L3 [Azospirillum sp. B510] gi|288909730|dbj|BAI71219.1| large subunit ribosomal protein L3 [Azospirillum sp. B510] Length = 236 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 134/215 (62%), Positives = 168/215 (78%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT V+ +G+ +PVTVL +D+CQVV RT +K+GY AVQ+GAG KVKN Sbjct: 1 MRSGLIAQKVGMTRVFTDDGQHVPVTVLKVDSCQVVAVRTEEKDGYTAVQLGAGAIKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP RG F+ V PK+KL EFRV D L+ VG+ S ++F GQ VDVTG +IGKGF Sbjct: 61 VNKPERGHFAKARVEPKRKLVEFRVDAD-ALIEVGAELSVTHFVAGQYVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG +G RVTV NL+VV Sbjct: 120 AGAMKRWNFGGLRATHGVSVSHRSHGSTGNRQDPGKVFKNKKMAGHLGDERVTVLNLQVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +VD+ RGLI++KG VPGA+ W+ +RD+ K Sbjct: 180 AVDEARGLIMLKGAVPGAE-GGWLRIRDAVKKKAP 213 >gi|239995000|ref|ZP_04715524.1| 50S ribosomal subunit protein L3 [Alteromonas macleodii ATCC 27126] Length = 212 Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats. Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ +V RT + +GY A+QV AG K Sbjct: 1 MAIGLVGRKVGMTRIFTEDGTSIPVTVIEATPNRVTQLRTEETDGYRALQVTAGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++K G F+ V + L EFR+++++ + VGS + F + +DVTG + GKG Sbjct: 61 INKAEAGHFAKAGVEAGRTLVEFRLEENEGADIEVGSEITVEIFNDTKKIDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F GA+KR NF R THG S+SHR+ GS G Q PG+VFK KKMAG++G +VT ++LEV Sbjct: 121 FQGAIKRWNFSSQRMTHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQLGNKQVTTQSLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD + GLILVKG VPGA N ++V+ + K+ Sbjct: 181 VRVDVENGLILVKGAVPGATGND-VIVKPAVKA 212 >gi|146297285|ref|YP_001181056.1| 50S ribosomal protein L3 [Caldicellulosiruptor saccharolyticus DSM 8903] gi|166233129|sp|A4XLT0|RL3_CALS8 RecName: Full=50S ribosomal protein L3 gi|145410861|gb|ABP67865.1| LSU ribosomal protein L3P [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 210 Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats. Identities = 100/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V++ G+ +PVTV+ C VV +T++K+GY A+QVG + K Sbjct: 1 MTKGILGKKIGMTQVFDEAGKVVPVTVIEAGPCVVVQKKTVEKDGYAAIQVGFEDIKETK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+RG F+ V PK+ L E R+ KD D VG F+ G+ VDVTG++ KGF Sbjct: 61 LNKPLRGHFAKHGVKPKRYLRELRL-KDADKYEVGQEIRVDIFSPGERVDVTGISKAKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH +HG S+ HR GS G P R F KKM GRMGG RVTV NL+VV Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGQRVTVLNLQVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPG KNS +++RDS KS Sbjct: 179 KVDPERNLLLVKGSVPG-NKNSLLIIRDSVKS 209 >gi|167036801|ref|YP_001664379.1| 50S ribosomal protein L3 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256752632|ref|ZP_05493484.1| ribosomal protein L3 [Thermoanaerobacter ethanolicus CCSD1] gi|320115223|ref|YP_004185382.1| 50S ribosomal protein L3 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|226730582|sp|B0KCK0|RL3_THEP3 RecName: Full=50S ribosomal protein L3 gi|166855635|gb|ABY94043.1| ribosomal protein L3 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256748452|gb|EEU61504.1| ribosomal protein L3 [Thermoanaerobacter ethanolicus CCSD1] gi|319928314|gb|ADV78999.1| 50S ribosomal protein L3 [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 210 Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats. Identities = 97/212 (45%), Positives = 130/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ RK GMT +++ +G IPVTV+ C VV +T++ +GY A+QVG G+ K K Sbjct: 1 MKKGILGRKHGMTQIFDEKGEVIPVTVIEAGPCVVVQKKTVETDGYNAIQVGFGDVKEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+ G F V K+ L EFR+ D VGS F G VDVTG++ GKGF Sbjct: 61 LTKPLIGHFKKAGVPFKRYLREFRLD-DISGYEVGSEIKVDIFKPGDRVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR+ +HG S HR GS G DPGR FK K M G MG RVT++NLEVV Sbjct: 120 AGVVKRYGANRGPMSHG-SKYHRRVGSMGATTDPGRTFKGKIMPGHMGHERVTIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + L+LVKG VPG K S ++++DS KS Sbjct: 179 KVDPELNLLLVKGSVPGP-KGSLLIIKDSVKS 209 >gi|89053074|ref|YP_508525.1| 50S ribosomal protein L3 [Jannaschia sp. CCS1] gi|109893433|sp|Q28UW2|RL3_JANSC RecName: Full=50S ribosomal protein L3 gi|88862623|gb|ABD53500.1| LSU ribosomal protein L3P [Jannaschia sp. CCS1] Length = 290 Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats. Identities = 128/215 (59%), Positives = 158/215 (73%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSGV+A+K+GMT ++ +G++IPVTVL LD QVV +T D +GY AVQ+GAG AK K Sbjct: 2 LRSGVIAKKVGMTRLFMEDGKQIPVTVLQLDKLQVVAKKTSDSDGYSAVQLGAGTAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S PMRG F+ +V PK+KL EFRV D +L+ VG ++ GQ VDVTG +IGKGF Sbjct: 62 TSAPMRGVFAKASVEPKRKLVEFRVDAD-NLIEVGEEIIADHYFEGQFVDVTGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPGRVFK KKMAG MG RVT +NL++V Sbjct: 121 QGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGRVFKGKKMAGHMGAARVTTQNLQIV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D RGLI++KG VPG+ K W+ V+D+ K Sbjct: 181 RTDTDRGLIMIKGAVPGS-KGGWVTVKDAVKKPFP 214 >gi|332139848|ref|YP_004425586.1| 50S ribosomal protein L3 [Alteromonas macleodii str. 'Deep ecotype'] gi|332139861|ref|YP_004425599.1| 50S ribosomal protein L3 [Alteromonas macleodii str. 'Deep ecotype'] gi|226725125|sp|B4RZN2|RL3_ALTMD RecName: Full=50S ribosomal protein L3 gi|327549870|gb|AEA96588.1| 50S ribosomal protein L3 [Alteromonas macleodii str. 'Deep ecotype'] gi|327549883|gb|AEA96601.1| 50S ribosomal protein L3 [Alteromonas macleodii str. 'Deep ecotype'] Length = 212 Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats. Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ +V RT + +GY A+QV AG K Sbjct: 1 MAIGLVGRKVGMTRIFTEDGTSIPVTVIEATPNRVTQLRTEESDGYRALQVTAGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++K G F+ V + L EFR+++++ + VGS + F + +DVTG + GKG Sbjct: 61 INKAEAGHFAKAGVEAGRTLVEFRLEENEGADIEVGSEITVEIFNDTKKIDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F GA+KR NF R THG S+SHR+ GS G Q PG+VFK KKMAG++G +VT ++LEV Sbjct: 121 FQGAIKRWNFSSQRMTHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQLGNKQVTTQSLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD + GLILVKG VPGA N ++V+ + K+ Sbjct: 181 VRVDVENGLILVKGAVPGATGND-VIVKPAVKA 212 >gi|145300935|ref|YP_001143776.1| 50S ribosomal protein L3 [Aeromonas salmonicida subsp. salmonicida A449] gi|166233113|sp|A4ST06|RL3_AERS4 RecName: Full=50S ribosomal protein L3 gi|142853707|gb|ABO92028.1| ribosomal protein L3 [Aeromonas salmonicida subsp. salmonicida A449] Length = 210 Score = 274 bits (702), Expect = 4e-72, Method: Composition-based stats. Identities = 95/212 (44%), Positives = 133/212 (62%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ ++ +V ++++ +GY A+QV G K Sbjct: 1 MTIGLVGRKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKSVETDGYNAIQVTTGAKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP G F+ V + L+EFR+ + VGS ++VDVTG + GKGF Sbjct: 61 VTKPEAGHFAKAGVEAGRGLWEFRLNNG-ETFTVGSELKVDLLADVKMVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V Sbjct: 120 AGTVKRHNFRTQDMTHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHMGAERVTTQNLELV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA N ++V+ + K+ Sbjct: 180 RVDAERNLLLIKGAVPGA-TNGNVIVKPAVKA 210 >gi|330505207|ref|YP_004382076.1| 50S ribosomal protein L3 [Pseudomonas mendocina NK-01] gi|328919493|gb|AEB60324.1| 50S ribosomal protein L3 [Pseudomonas mendocina NK-01] Length = 209 Score = 274 bits (702), Expect = 4e-72, Method: Composition-based stats. Identities = 102/212 (48%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V + + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKNEESDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK G F+ NV+ + + EFR+++ D G + + F GQLVDVTG + GKGF Sbjct: 61 VSKAQAGHFAKANVAAGRTVLEFRLEEGD--YQAGDLINAEIFQAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA ++VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGD-VIVRPAVKA 209 >gi|312115687|ref|YP_004013283.1| 50S ribosomal protein L3 [Rhodomicrobium vannielii ATCC 17100] gi|311220816|gb|ADP72184.1| 50S ribosomal protein L3 [Rhodomicrobium vannielii ATCC 17100] Length = 236 Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats. Identities = 125/215 (58%), Positives = 161/215 (74%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ G +PVTVL LD CQV+ HRT + NGY A+QVGAG KVKN Sbjct: 1 MRSGLLAQKVGMTRIFTEAGEHVPVTVLKLDQCQVIAHRTQEANGYTAIQVGAGSRKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++ RG F+ V PK K+ EFRV + +++ VG+ + +F GQ VDV G +IGKGF Sbjct: 61 VTRAERGHFAKAQVEPKAKVVEFRVTPE-NVIEVGAELTADHFLAGQFVDVIGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRATHGVSISHRSHGSTG RQDPG+ FK KKMAG MG +RVT +NL+VV Sbjct: 120 AGAMKRWNFGGLRATHGVSISHRSHGSTGNRQDPGKTFKGKKMAGHMGVDRVTTQNLQVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D +RGL+L++G VPGA K W++V+D+ K + Sbjct: 180 RTDVERGLLLIRGAVPGA-KGGWVMVKDAVKKPLP 213 >gi|117619475|ref|YP_854839.1| ribosomal protein L3 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166233112|sp|A0KF21|RL3_AERHH RecName: Full=50S ribosomal protein L3 gi|117560882|gb|ABK37830.1| ribosomal protein L3 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 210 Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats. Identities = 95/212 (44%), Positives = 131/212 (61%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ ++ +V ++++ +GY A+QV G K Sbjct: 1 MTIGLVGRKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKSVETDGYNAIQVTTGAKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP G F+ V + L+EFR+ + VGS +LVDVTG + GKGF Sbjct: 61 VTKPEAGHFAKAGVEAGRGLWEFRLNNG-ETFTVGSELKVDLLADVKLVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF THG S+SHR GS G Q PGRVFK KKMAG MG RVT +NLE+V Sbjct: 120 AGTVKRWNFRTQDMTHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGHMGAERVTTQNLELV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA N ++V+ + K+ Sbjct: 180 RVDAERNLLLIKGAVPGA-TNGNVIVKPAVKA 210 >gi|262273379|ref|ZP_06051193.1| LSU ribosomal protein L3p (L3e) [Grimontia hollisae CIP 101886] gi|262222357|gb|EEY73668.1| LSU ribosomal protein L3p (L3e) [Grimontia hollisae CIP 101886] Length = 209 Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats. Identities = 96/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V RK+GMT ++ EG IPVTV+ ++ +V RT + +GY A+QV G K ++ Sbjct: 2 IGLVGRKVGMTRIFTEEGVSIPVTVVEVETNRVTQVRTPEVDGYSAIQVTTGVKKASRIT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELNVDLFADIKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPGA S ++V+ + K+ Sbjct: 181 DAERKLLLIKGAVPGA-TGSNVIVKPAVKA 209 >gi|266620263|ref|ZP_06113198.1| 50S ribosomal protein L3 [Clostridium hathewayi DSM 13479] gi|288868166|gb|EFD00465.1| 50S ribosomal protein L3 [Clostridium hathewayi DSM 13479] Length = 211 Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats. Identities = 93/214 (43%), Positives = 128/214 (59%), Gaps = 3/214 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++A K+GMT ++N +G PVTVL C V +T + +GY AVQVG + + K Sbjct: 1 MKKGILATKVGMTQIFNEDGVLTPVTVLLAGPCVVTQVKTAENDGYDAVQVGFVDKRAKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKP++G F VS K+ + EF+ + + V F G +D T ++ GKGF Sbjct: 61 VSKPVKGHFDKAGVSYKRYVREFKFENASE-YSVKDEIKADIFAAGDKIDATAISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G DP +VFK KKM G+MG RVT++NLE+V Sbjct: 120 QGAIKRHGQSRGPMAHG-SKFHRHAGSNGSCSDPSKVFKGKKMPGQMGNKRVTIQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 VD + LILVKG VPG KK S + ++++ K+AV Sbjct: 179 KVDAENNLILVKGAVPGPKK-SLVTIKETVKAAV 211 >gi|221133614|ref|ZP_03559919.1| 50S ribosomal subunit protein L3 [Glaciecola sp. HTCC2999] Length = 212 Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats. Identities = 95/213 (44%), Positives = 129/213 (60%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ +V RT + +GY A+QV AG K Sbjct: 1 MAIGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRVTQLRTEETDGYRALQVTAGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQK-DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V L+EFR+ + + + VGS + F VDV G + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGSGLWEFRLDDSEGENIEVGSEITVELFNDTNKVDVVGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F GA+KR NF R THG S+SHR+ GS G Q PG+VFK KKMAG++G RVT +LE+ Sbjct: 121 FQGAIKRWNFSSQRMTHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQLGNKRVTTISLEL 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD + L+L+KG VPGA S ++VR + K+ Sbjct: 181 VRVDVENNLLLIKGAVPGA-TGSDVIVRPAVKA 212 >gi|149915844|ref|ZP_01904368.1| 30S ribosomal protein S10 [Roseobacter sp. AzwK-3b] gi|149810167|gb|EDM70013.1| 30S ribosomal protein S10 [Roseobacter sp. AzwK-3b] Length = 276 Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats. Identities = 124/215 (57%), Positives = 158/215 (73%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSGV+A+K+GMT ++ +GR++PVTVL LD QVV RT +K+GY AVQ+GAG K K Sbjct: 2 LRSGVIAKKVGMTRLFMEDGRQVPVTVLQLDKLQVVAQRTPEKDGYTAVQLGAGSIKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS+PMRG F+S V PK+K+ EFRV + +++ VG + ++ GQ VDV G +IGKGF Sbjct: 62 VSQPMRGHFASAKVEPKRKIAEFRVAPE-NMINVGEEITADHYFAGQYVDVCGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNF GL THGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV Sbjct: 121 AGAMKRHNFKGLEMTHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D RGLI+VKG VPG+ K W+ ++D+ K Sbjct: 181 KTDADRGLIMVKGAVPGS-KGGWVTIKDAVKKPFP 214 >gi|126739691|ref|ZP_01755383.1| 50S ribosomal protein L3 [Roseobacter sp. SK209-2-6] gi|126719337|gb|EBA16047.1| 50S ribosomal protein L3 [Roseobacter sp. SK209-2-6] Length = 234 Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats. Identities = 135/215 (62%), Positives = 164/215 (76%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ +G++IPVTVLHLD QVV RT DK+GY AVQ+GAG AKVK Sbjct: 1 MRSGIIAKKVGMTRLFMEDGQQIPVTVLHLDGLQVVSQRTEDKDGYTAVQLGAGSAKVKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK MRG F++ V PK+KL EFRV D L+ VG+ S +F GQ VDVTG +IGKGF Sbjct: 61 VSKAMRGHFAASKVEPKRKLVEFRV-PADALIEVGAEISAEHFLEGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D +RGL+ +KG VPG K+ W+ V+D+ K Sbjct: 180 KTDAERGLVFIKGAVPGP-KSGWVTVKDAVKKKAP 213 >gi|146308923|ref|YP_001189388.1| 50S ribosomal protein L3 [Pseudomonas mendocina ymp] gi|166233181|sp|A4XZ90|RL3_PSEMY RecName: Full=50S ribosomal protein L3 gi|145577124|gb|ABP86656.1| LSU ribosomal protein L3P [Pseudomonas mendocina ymp] Length = 209 Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats. Identities = 102/212 (48%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V + + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKNEESDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK G F+ NV+ + + EFR+++ D G + + F GQLVDVTG + GKGF Sbjct: 61 VSKAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDLINAEIFQAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA ++VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGD-VIVRPAVKA 209 >gi|332172249|gb|AEE21503.1| 50S ribosomal protein L3 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 212 Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats. Identities = 92/213 (43%), Positives = 134/213 (62%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G IPVTV+ +V RT + +GY A+QV AG+ K Sbjct: 1 MAIGLIGRKVGMTRIFTEDGVSIPVTVIEATPNRVTQLRTDETDGYTALQVTAGDKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQK-DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L+EFR+ + + + VGS + F ++VDV G + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLWEFRLDGTEGEGIEVGSEITVEIFAETKMVDVAGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F GA+KR NF R +HG S+SHR+ GS G Q PG+VFK KKMAG+MG RVTV++L+V Sbjct: 121 FQGAIKRWNFSHQRNSHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNKRVTVQSLDV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD + L+LV+G VPGA ++++ + K+ Sbjct: 181 VRVDAENNLLLVRGNVPGAPGGD-VIIKAAVKA 212 >gi|289579145|ref|YP_003477772.1| 50S ribosomal protein L3 [Thermoanaerobacter italicus Ab9] gi|297545329|ref|YP_003677631.1| 50S ribosomal protein L3 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|289528858|gb|ADD03210.1| 50S ribosomal protein L3 [Thermoanaerobacter italicus Ab9] gi|296843104|gb|ADH61620.1| 50S ribosomal protein L3 [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 210 Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats. Identities = 97/212 (45%), Positives = 129/212 (60%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ RK GMT +++ +G IPVTV+ C VV +T + +GY A+QVG G+ K K Sbjct: 1 MKKGILGRKHGMTQIFDEKGEVIPVTVIEAGPCVVVQKKTTETDGYNAIQVGFGDVKEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+ G F V K+ L EFR+ D VGS F G VDVTG++ GKGF Sbjct: 61 LTKPLIGHFKKAGVPFKRYLREFRLD-DVSGYEVGSEIKVDIFKPGDRVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR+ +HG S HR GS G DPGR FK K M G MG RVT++NLEVV Sbjct: 120 AGVVKRYGASRGPMSHG-SKYHRRVGSMGATTDPGRTFKGKIMPGHMGHKRVTIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + L+LVKG VPG K S ++++DS KS Sbjct: 179 KVDPELNLLLVKGSVPGP-KGSLLIIKDSVKS 209 >gi|15599459|ref|NP_252953.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa PAO1] gi|116052298|ref|YP_788856.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa UCBPP-PA14] gi|152989623|ref|YP_001346223.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa PA7] gi|218889409|ref|YP_002438273.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa LESB58] gi|296387180|ref|ZP_06876679.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa PAb1] gi|42559696|sp|Q9HWD5|RL3_PSEAE RecName: Full=50S ribosomal protein L3 gi|122261447|sp|Q02T80|RL3_PSEAB RecName: Full=50S ribosomal protein L3 gi|166233180|sp|A6UZI8|RL3_PSEA7 RecName: Full=50S ribosomal protein L3 gi|226730551|sp|B7V644|RL3_PSEA8 RecName: Full=50S ribosomal protein L3 gi|9950480|gb|AAG07651.1|AE004841_29 50S ribosomal protein L3 [Pseudomonas aeruginosa PAO1] gi|115587519|gb|ABJ13534.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa UCBPP-PA14] gi|150964781|gb|ABR86806.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa PA7] gi|218769632|emb|CAW25392.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa LESB58] Length = 211 Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats. Identities = 99/212 (46%), Positives = 135/212 (63%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV AGE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEVEPNRVTQFKTEETDGYRAVQVTAGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ NV+ + ++EFR+ ++ G + F GQ+VDVTG + GKGF Sbjct: 61 VTKAQAGHFAKANVAAGRGVWEFRL--GEEQYAAGDQITVDLFQAGQMVDVTGESKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G +G RVTV++LE+V Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHLGAERVTVQSLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA ++VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGD-VIVRPAAKA 209 >gi|260577181|ref|ZP_05845158.1| ribosomal protein L3 [Rhodobacter sp. SW2] gi|259020655|gb|EEW23974.1| ribosomal protein L3 [Rhodobacter sp. SW2] Length = 241 Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats. Identities = 123/216 (56%), Positives = 161/216 (74%), Gaps = 2/216 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT ++ +G+++PVTVL LD QVV RT +++GY AVQ+GAG AK K Sbjct: 1 MRSGVIAKKLGMTRLFLEDGKQVPVTVLQLDALQVVAQRTAERDGYTAVQLGAGAAKAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + MRG F++ NV+PK+K+ EFRV D +L+ VG+ + ++ GQ VD+ G +IGKGF Sbjct: 61 TTAGMRGHFAAANVAPKRKIAEFRVSPD-NLIDVGAEITADHYLAGQFVDIAGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GAMKRHNFGGLRA+HGVS+SHRSHGSTG QDPG+VFK KKMAG MG R T +NL+VV Sbjct: 120 QGAMKRHNFGGLRASHGVSVSHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRCTTQNLQVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D RGLI++KG VPG+ K W+ ++D+ K A Sbjct: 180 RTDADRGLIMIKGAVPGS-KGGWVTIKDAVKKAAPA 214 >gi|146281170|ref|YP_001171323.1| 50S ribosomal protein L3 [Pseudomonas stutzeri A1501] gi|166233183|sp|A4VHN0|RL3_PSEU5 RecName: Full=50S ribosomal protein L3 gi|145569375|gb|ABP78481.1| ribosomal protein L3 [Pseudomonas stutzeri A1501] gi|327479323|gb|AEA82633.1| 50S ribosomal protein L3 [Pseudomonas stutzeri DSM 4166] Length = 211 Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats. Identities = 100/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT V+ +G IPVTV+ ++ +V + + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRVFTEDGVSIPVTVIEIEPNRVTQFKNEESDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ NV+ + ++EFR++ ++ VG + F GQLVDVTG + GKGF Sbjct: 61 VTKAQAGHFAKANVAAGRGVWEFRLEGEE--FQVGDQINAEIFQAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LE+V Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGD-VFVRPAVKA 209 >gi|148545739|ref|YP_001265841.1| 50S ribosomal protein L3 [Pseudomonas putida F1] gi|161378147|ref|NP_742620.2| 50S ribosomal protein L3 [Pseudomonas putida KT2440] gi|167031500|ref|YP_001666731.1| 50S ribosomal protein L3 [Pseudomonas putida GB-1] gi|325272044|ref|ZP_08138485.1| 50S ribosomal protein L3 [Pseudomonas sp. TJI-51] gi|42559622|sp|Q88QN5|RL3_PSEPK RecName: Full=50S ribosomal protein L3 gi|166233182|sp|A5VXP7|RL3_PSEP1 RecName: Full=50S ribosomal protein L3 gi|189042858|sp|B0KK67|RL3_PSEPG RecName: Full=50S ribosomal protein L3 gi|148509797|gb|ABQ76657.1| LSU ribosomal protein L3P [Pseudomonas putida F1] gi|166857988|gb|ABY96395.1| ribosomal protein L3 [Pseudomonas putida GB-1] gi|313496819|gb|ADR58185.1| RplC [Pseudomonas putida BIRD-1] gi|324102821|gb|EGC00227.1| 50S ribosomal protein L3 [Pseudomonas sp. TJI-51] Length = 211 Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats. Identities = 100/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GV+ RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVIGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + ++EFR+++ D G + FT GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRGVWEFRLEEGD--FQAGDLIKAELFTAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA + VR + K+ Sbjct: 179 RVDAERNLLLIKGAVPGATGGDVV-VRPAVKA 209 >gi|330827883|ref|YP_004390835.1| 50S ribosomal protein L3 [Aeromonas veronii B565] gi|328803019|gb|AEB48218.1| 50S ribosomal protein L3 [Aeromonas veronii B565] Length = 210 Score = 273 bits (700), Expect = 8e-72, Method: Composition-based stats. Identities = 96/212 (45%), Positives = 132/212 (62%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ ++ +V ++++ +GY A+QV G K Sbjct: 1 MTIGLVGRKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKSVETDGYNAIQVTTGAKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP G F+ V + L+EFR+ + VGS +LVDVTG + GKGF Sbjct: 61 VTKPEAGHFAKAGVEAGRGLWEFRLNNG-ETFTVGSELKVDLLADVKLVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNF THG S+SHR GS G Q PGRVFK KKMAG MG RVT +NLE+V Sbjct: 120 AGTVKRHNFRTQDMTHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGHMGAERVTTQNLELV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA N ++V+ + K+ Sbjct: 180 RVDAERNLLLIKGAVPGA-TNGNVIVKPAVKA 210 >gi|77359116|ref|YP_338691.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas haloplanktis TAC125] gi|109893540|sp|Q3IF25|RL3_PSEHT RecName: Full=50S ribosomal protein L3 gi|76874027|emb|CAI85248.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas haloplanktis TAC125] Length = 211 Score = 273 bits (700), Expect = 9e-72, Method: Composition-based stats. Identities = 93/212 (43%), Positives = 127/212 (59%), Gaps = 1/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ ++ ++ +GY A+QV AG K Sbjct: 1 MALGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRIAQIKSEATDGYNALQVTAGTKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ V + L+EFR+ + VG+ + F VDVTG + GKGF Sbjct: 61 VNKASAGHFAKAGVEAGRGLWEFRLNGGEGDFEVGAELTVELFNEINKVDVTGTSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG MG RVT +NLE+V Sbjct: 121 QGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGHMGAERVTTQNLELV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA ++V+ + K+ Sbjct: 181 RVDAERNLLLVKGAVPGAIGGD-VIVKPAVKA 211 >gi|58038855|ref|YP_190819.1| 50S ribosomal protein L3 [Gluconobacter oxydans 621H] gi|81819160|sp|Q5FTY3|RL3_GLUOX RecName: Full=50S ribosomal protein L3 gi|58001269|gb|AAW60163.1| LSU ribosomal protein L3P [Gluconobacter oxydans 621H] Length = 227 Score = 273 bits (700), Expect = 9e-72, Method: Composition-based stats. Identities = 127/219 (57%), Positives = 163/219 (74%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+KLGMT ++ +G +PVTVLHLDN +VV RT +++GY A+Q+G G AKVKN Sbjct: 1 MRTGLIAKKLGMTRLFKEDGTHVPVTVLHLDNVEVVDARTNERDGYTAIQLGLGNAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K RG F+ V PK+ L EFRV +D LL G+ S ++F VGQ VDVTG + GKGF Sbjct: 61 VTKANRGHFARTKVEPKRHLAEFRVSED-ALLEAGTKLSAAHFVVGQKVDVTGQSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG RVT NLE+ Sbjct: 120 AGVMKRHNFAGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGDERVTTLNLEIA 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 +VD++R LI+V+G +PGA KN +L+RD+ K A + Sbjct: 180 AVDEERNLIMVRGAIPGA-KNGLVLIRDAIKKARHADAP 217 >gi|70732882|ref|YP_262650.1| 50S ribosomal protein L3 [Pseudomonas fluorescens Pf-5] gi|109893539|sp|Q4K533|RL3_PSEF5 RecName: Full=50S ribosomal protein L3 gi|68347181|gb|AAY94787.1| ribosomal protein L3 [Pseudomonas fluorescens Pf-5] Length = 211 Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 100/212 (47%), Positives = 135/212 (63%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + ++EFR+++ + G + + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRGVWEFRLEEGE--YQAGDLINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + + VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209 >gi|330962525|gb|EGH62785.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 211 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 101/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR+++ D G + + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDLINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + + VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209 >gi|254466883|ref|ZP_05080294.1| ribosomal protein L3 [Rhodobacterales bacterium Y4I] gi|206687791|gb|EDZ48273.1| ribosomal protein L3 [Rhodobacterales bacterium Y4I] Length = 234 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 132/215 (61%), Positives = 162/215 (75%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ +G++IPVTVLHLD QVV RT DK+GY AVQ+GAG AK K Sbjct: 1 MRSGIIAKKVGMTRLFMEDGKQIPVTVLHLDGLQVVAQRTEDKDGYTAVQLGAGTAKAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ MRG F++ V PK+KL EFRV D L+ VG+ S +F GQ VDVTG +IGKGF Sbjct: 61 TSQAMRGHFAAAKVEPKRKLVEFRV-PADALIEVGAEISAEHFLAGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D +RGL+ +KG VPG K+ W+ V+D+ K Sbjct: 180 KTDAERGLVFIKGAVPGP-KSGWVTVKDAVKKKAP 213 >gi|307543825|ref|YP_003896304.1| 50S ribosomal protein L3 [Halomonas elongata DSM 2581] gi|307215849|emb|CBV41119.1| 50S ribosomal protein L3 [Halomonas elongata DSM 2581] Length = 212 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 96/213 (45%), Positives = 134/213 (62%), Gaps = 1/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V +K GMT V+ +G +PVTV+ ++ +V ++++ +GY AVQV G K K+ Sbjct: 1 MTIGLVGKKAGMTRVFTEDGASVPVTVIEVEPNRVTRVKSVESDGYAAVQVTTGSRKAKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SK G F+ V + L EFR+ + + VG + S F GQ VDVTG + GKG+ Sbjct: 61 LSKAQAGEFAKAGVEAGRSLMEFRLDEGAEAPEVGGELTVSLFEAGQRVDVTGTSKGKGY 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR NF +HG S++HR+ GS G Q PGRVFK KKMAG+MG R TV+ LEVV Sbjct: 121 QGAVKRWNFRTQDNSHGNSLAHRAPGSIGMCQTPGRVFKGKKMAGQMGNARCTVQTLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD +R L+L+KG VPGA S ++VR + K+ Sbjct: 181 RVDAERNLLLIKGAVPGA-TGSDVIVRSAVKAG 212 >gi|109896798|ref|YP_660053.1| ribosomal protein L3 [Pseudoalteromonas atlantica T6c] gi|123171764|sp|Q15YN9|RL3_PSEA6 RecName: Full=50S ribosomal protein L3 gi|109699079|gb|ABG38999.1| LSU ribosomal protein L3P [Pseudoalteromonas atlantica T6c] Length = 212 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 92/213 (43%), Positives = 134/213 (62%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G IPVTV+ +V RT + +GY A+QV AG+ K Sbjct: 1 MAIGLIGRKVGMTRIFTEDGVSIPVTVIEATPNRVTQLRTDETDGYTALQVTAGDKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQ-KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L+EFR+ + + + VGS + F ++VDV G + GKG Sbjct: 61 VNKAAAGHFAKAGVEAGRGLWEFRLDGNEGEGIEVGSEITVEIFAETKMVDVAGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F GA+KR NF R +HG S+SHR+ GS G Q PG+VFK KKMAG+MG RVTV++L+V Sbjct: 121 FQGAIKRWNFSHQRNSHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNKRVTVQSLDV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD + L+LV+G VPGA ++++ + K+ Sbjct: 181 VRVDAENNLLLVRGNVPGAPGGD-VIIKAAVKA 212 >gi|254294440|ref|YP_003060463.1| ribosomal protein L3 [Hirschia baltica ATCC 49814] gi|254042971|gb|ACT59766.1| ribosomal protein L3 [Hirschia baltica ATCC 49814] Length = 243 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 128/215 (59%), Positives = 160/215 (74%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+KLGMT V+ +G IPVTVL LD CQVV RT +++GY+A+Q+GAG K KN Sbjct: 1 MRTGLLAKKLGMTRVFGEDGAHIPVTVLQLDGCQVVGQRTKERDGYVALQLGAGSRKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPMRG F++ V PK L EFRV +D L+ VG+ FS +F GQ VD+ G GKGF Sbjct: 61 VTKPMRGQFAAAKVEPKAVLREFRVDEDM-LVDVGAEFSAEHFVPGQKVDIAGTAKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRA+HGVSISHR+ GSTG QDPG+VFK KKMAG+ G R+T +N+EVV Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRALGSTGQCQDPGKVFKGKKMAGQYGNVRITTQNIEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 VD RGL+LVKG VP + KN W+ VRD+ K A Sbjct: 180 RVDADRGLVLVKGAVP-SAKNGWVEVRDAVKKAAP 213 >gi|229592903|ref|YP_002875022.1| 50S ribosomal protein L3 [Pseudomonas fluorescens SBW25] gi|259709731|sp|C3K2X6|RL3_PSEFS RecName: Full=50S ribosomal protein L3 gi|229364769|emb|CAY52766.1| 50S ribosomal protein L3 [Pseudomonas fluorescens SBW25] Length = 211 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR++ D G + + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEDGD--YQAGDLINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + + VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209 >gi|329889129|ref|ZP_08267472.1| 50S ribosomal protein L3 [Brevundimonas diminuta ATCC 11568] gi|328844430|gb|EGF93994.1| 50S ribosomal protein L3 [Brevundimonas diminuta ATCC 11568] Length = 247 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 124/219 (56%), Positives = 155/219 (70%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+KLGMT V+ +G +PVTVL LD CQVV RT +++GY+A+Q+GAG K KN Sbjct: 1 MRTGVIAKKLGMTRVFADDGAHVPVTVLQLDGCQVVGQRTKERDGYVALQLGAGVKKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +K R F+ V PK + EFRV +D LL VG+ S +F GQ VD+ G TIGKGF Sbjct: 61 TAKAQREVFAKAEVEPKAYVTEFRV-GEDALLDVGAELSADHFLAGQKVDIQGHTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRA+HGVSISHRSHGSTG RQDPG+VFK KKMAG +G VT +NL VV Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHLGQEVVTTQNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 VD +RGLIL+KG VPG +++ + D+ K A Sbjct: 180 RVDAERGLILIKGAVPG-HDGAYVKISDAIKKARPADAP 217 >gi|170729009|ref|YP_001763035.1| 50S ribosomal protein L3 [Shewanella woodyi ATCC 51908] gi|226730568|sp|B1KMY3|RL3_SHEWM RecName: Full=50S ribosomal protein L3 gi|169814356|gb|ACA88940.1| ribosomal protein L3 [Shewanella woodyi ATCC 51908] Length = 212 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 94/213 (44%), Positives = 132/213 (61%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G IPVTV+ + +V RTL+ +GY A+QV G K Sbjct: 1 MAIGLIGRKVGMTRIFTEDGASIPVTVIEIAANRVTQVRTLETDGYRALQVTTGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G F+ V + L+E R+ D+ + + VG+ + F VDVTG + GKG Sbjct: 61 ITKPEAGHFAKAGVEAGRGLWEVRLADDEGEGIEVGAELNVDIFADVAKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF THG S++HRS+GS G Q PGRVFK KKM+G MG RVT +NL+V Sbjct: 121 FQGGIKRWNFHAQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LVKG VPGA + I ++ + K+ Sbjct: 181 VRVDAERNLLLVKGAVPGATNGNLI-IKPAVKA 212 >gi|66047775|ref|YP_237616.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. syringae B728a] gi|257483185|ref|ZP_05637226.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289648942|ref|ZP_06480285.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. aesculi str. 2250] gi|289675488|ref|ZP_06496378.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. syringae FF5] gi|298489097|ref|ZP_07007119.1| LSU ribosomal protein L3p (L3e) [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|81307859|sp|Q4ZMP4|RL3_PSEU2 RecName: Full=50S ribosomal protein L3 gi|63258482|gb|AAY39578.1| Ribosomal protein L3 [Pseudomonas syringae pv. syringae B728a] gi|298156409|gb|EFH97507.1| LSU ribosomal protein L3p (L3e) [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330891931|gb|EGH24592.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. mori str. 301020] gi|330953197|gb|EGH53457.1| 50S ribosomal protein L3 [Pseudomonas syringae Cit 7] gi|330969821|gb|EGH69887.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. aceris str. M302273PT] gi|330976640|gb|EGH76684.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. aptata str. DSM 50252] gi|331012413|gb|EGH92469.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 211 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR+++ D G + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + + VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209 >gi|86135762|ref|ZP_01054341.1| 50S ribosomal protein L3 [Roseobacter sp. MED193] gi|85826636|gb|EAQ46832.1| 50S ribosomal protein L3 [Roseobacter sp. MED193] Length = 236 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 133/215 (61%), Positives = 160/215 (74%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ +G++IPVTVLHLD QVV RT DK+GY AVQ+GAG AK K Sbjct: 1 MRSGIIAKKVGMTRLFMEDGQQIPVTVLHLDGLQVVSQRTDDKDGYTAVQLGAGSAKAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F++ V PK+KL EFRV D L+ VG+ S +F GQ VDVTG +IGKGF Sbjct: 61 TSKAMRGHFAASKVEPKRKLVEFRV-PADALIEVGAEISAEHFLEGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRWNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D RGL+ +KG VPG K+ W+ V+D+ K Sbjct: 180 KTDADRGLVFIKGAVPGP-KSGWVTVKDAVKKKAP 213 >gi|119383511|ref|YP_914567.1| 50S ribosomal protein L3 [Paracoccus denitrificans PD1222] gi|166233172|sp|A1B027|RL3_PARDP RecName: Full=50S ribosomal protein L3 gi|119373278|gb|ABL68871.1| LSU ribosomal protein L3P [Paracoccus denitrificans PD1222] Length = 245 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 121/214 (56%), Positives = 165/214 (77%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+GV+A+KLGMT ++ +GR++PVTVLH+DN QV+ RT +++GY+A+Q+GAGEAK K Sbjct: 2 LRTGVIAKKLGMTRLFLEDGRQVPVTVLHVDNVQVIAQRTAEQDGYVALQLGAGEAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + +RG F+ NV+PK+K+ EFRV + +L+ VG ++ GQ VD+ G +IGKGF Sbjct: 62 TTAALRGHFAKANVAPKRKIAEFRVSPE-NLVEVGEEIVADHYFEGQYVDIAGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG +G RVT +NL+VV Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHLGAVRVTTQNLQVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D +RGLI+VKG VPG+ K W+ ++D+ K + Sbjct: 181 KTDAERGLIMVKGSVPGS-KGGWVTIKDAVKKPL 213 >gi|330812075|ref|YP_004356537.1| 50S ribosomal protein L3 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380183|gb|AEA71533.1| 50S ribosomal protein L3 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 211 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 100/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR+++ + G + + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGE--YQAGDLINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + + VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209 >gi|297181138|gb|ADI17335.1| hypothetical protein [uncultured Oceanospirillales bacterium HF0070_21F08] Length = 211 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 98/214 (45%), Positives = 130/214 (60%), Gaps = 3/214 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GV+ RK GMT V+ EG +PVTV+ + +V +T + +GY AVQV GE + Sbjct: 1 MAIGVIGRKCGMTRVFTEEGISVPVTVIEVTPNRVSQVKTEETDGYEAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP G F+ V + EFR + L GS + F GQ VDVTG + GKGF Sbjct: 61 VTKPQAGHFAKAGVEAGRSAGEFR--SEVGELQAGSEITLEVFEAGQSVDVTGTSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF ATHG S+SHR+ GS G Q PGRVFK KKM+G +G RVTV+NLE+V Sbjct: 119 AGTVKRWNFRTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMSGHLGAERVTVQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 VD ++ L+LVKG +PGA ++VR + K+ Sbjct: 179 RVDAEKNLLLVKGAIPGAAGGD-VIVRPAVKAKA 211 >gi|260589279|ref|ZP_05855192.1| 50S ribosomal protein L3 [Blautia hansenii DSM 20583] gi|331082685|ref|ZP_08331808.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 6_1_63FAA] gi|260540360|gb|EEX20929.1| 50S ribosomal protein L3 [Blautia hansenii DSM 20583] gi|330400304|gb|EGG79946.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 6_1_63FAA] Length = 209 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 91/211 (43%), Positives = 125/211 (59%), Gaps = 5/211 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G PVTVL C V +T+D +GY AVQVG G+ + Sbjct: 1 MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTMDNDGYEAVQVGFGDKRENI 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+G F VS K+ + E +++ + +G F G +DVT + GKGF Sbjct: 61 VNKPMKGHFEKAGVSCKRFVRELKLEGE---YTLGQEIKADIFAAGDKIDVTATSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G DP +VFK K+M G MG RVTV+NLEVV Sbjct: 118 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKRMPGHMGHVRVTVQNLEVV 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + L+LVKG VPG KK S + ++++ K Sbjct: 177 RVDAENNLLLVKGAVPGPKK-SLVTIKETVK 206 >gi|296447530|ref|ZP_06889452.1| 50S ribosomal protein L3 [Methylosinus trichosporium OB3b] gi|296254918|gb|EFH02023.1| 50S ribosomal protein L3 [Methylosinus trichosporium OB3b] Length = 237 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 137/219 (62%), Positives = 165/219 (75%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G +PVTVL LD CQVV HRT+++NGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKVGMTRVFTEAGEHVPVTVLKLDGCQVVAHRTMEQNGYTAVQLGIGRAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK RG F+ V PK KL EFRV + +LLPVG+ + +F VGQ VDVTG ++GKGF Sbjct: 61 VSKAERGRFAIAKVEPKLKLAEFRV-AESELLPVGAEITADHFVVGQFVDVTGTSLGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPG+ FKNKKMAG MG +RVT +NL VV Sbjct: 120 AGAMKRWNFGGLRATHGVSVSHRSHGSTGGRQDPGKTFKNKKMAGHMGVDRVTTQNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 D +RGL+LV+G VPG WI VRD+ K A+ + Sbjct: 180 QTDVERGLLLVEGSVPG-HAGGWIFVRDAVKRALPAEAP 217 >gi|119468280|ref|ZP_01611406.1| 50S ribosomal subunit protein L3 [Alteromonadales bacterium TW-7] gi|119448273|gb|EAW29537.1| 50S ribosomal subunit protein L3 [Alteromonadales bacterium TW-7] Length = 211 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 92/212 (43%), Positives = 127/212 (59%), Gaps = 1/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ ++ ++ +GY A+QV AG K Sbjct: 1 MALGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRIAQIKSDATDGYNALQVTAGTKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ V + L+EFR+ + VG+ + F VDVTG + GKGF Sbjct: 61 VNKASAGHFAKAGVEAGRGLWEFRLNGGEGDFEVGAELTVELFNEINKVDVTGTSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG MG RVT +NLE+V Sbjct: 121 QGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGHMGAERVTTQNLELV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPG+ ++V+ + K+ Sbjct: 181 RVDAERNLLLVKGAVPGSIGGD-VIVKPAVKA 211 >gi|168018029|ref|XP_001761549.1| predicted protein [Physcomitrella patens subsp. patens] gi|162687233|gb|EDQ73617.1| predicted protein [Physcomitrella patens subsp. patens] Length = 258 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 101/209 (48%), Positives = 143/209 (68%), Gaps = 2/209 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R+GV+A K GMT +++ G R+P+TVL +++ VV +T + +G+ A+Q+GAG+ K K Sbjct: 13 FRTGVIAVKCGMTAIWDKWGARVPMTVLWVNDNHVVQVKTEETDGHFALQIGAGQRKPKQ 72 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP G F + V K+ L EF V +D LLP+G+ S +F GQ VD+ G+T GKGF Sbjct: 73 LTKPELGHFRAAGVPLKQHLAEFPVTED-ALLPLGTELSVRHFRPGQYVDIAGITTGKGF 131 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G MKR F G+ A+HG S+SHRS GSTG RQDPG+VFK KKMAG MG R TVKN+ + Sbjct: 132 QGGMKRWGFAGMPASHGASLSHRSLGSTGGRQDPGKVFKGKKMAGHMGAVRRTVKNVWIY 191 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 ++ +R LI V+G VPG K +++ +RD+ Sbjct: 192 KIEPERDLIWVRGQVPG-HKGNFVYIRDA 219 >gi|315125262|ref|YP_004067265.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas sp. SM9913] gi|315013775|gb|ADT67113.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas sp. SM9913] Length = 211 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 92/212 (43%), Positives = 128/212 (60%), Gaps = 1/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ ++ ++ +GY A+QV AG K Sbjct: 1 MALGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRIAQIKSDATDGYNALQVTAGTKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ V + L+EFR+ + VG+ + F VDVTG + GKGF Sbjct: 61 VNKATAGHFAKAGVEAGRGLWEFRLNGGEGDFEVGAELTVELFNEINKVDVTGTSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG+MG +VT +NLE+V Sbjct: 121 QGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNEQVTTQNLELV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA ++V+ + K+ Sbjct: 181 RVDAERNLLLVKGAVPGAIGGD-VIVKPAVKA 211 >gi|28867854|ref|NP_790473.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tomato str. DC3000] gi|213969214|ref|ZP_03397352.1| ribosomal protein L3 [Pseudomonas syringae pv. tomato T1] gi|301381721|ref|ZP_07230139.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tomato Max13] gi|302061079|ref|ZP_07252620.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tomato K40] gi|302130780|ref|ZP_07256770.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|42559621|sp|Q889X1|RL3_PSESM RecName: Full=50S ribosomal protein L3 gi|28851090|gb|AAO54168.1| ribosomal protein L3 [Pseudomonas syringae pv. tomato str. DC3000] gi|213925892|gb|EEB59449.1| ribosomal protein L3 [Pseudomonas syringae pv. tomato T1] gi|330879442|gb|EGH13591.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330966911|gb|EGH67171.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. actinidiae str. M302091] Length = 211 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 100/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR+++ + G + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGE--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + + VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209 >gi|237797432|ref|ZP_04585893.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. oryzae str. 1_6] gi|302189277|ref|ZP_07265950.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. syringae 642] gi|331020282|gb|EGI00339.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 211 Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR+++ D G + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQTGDQINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + + VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209 >gi|254438817|ref|ZP_05052311.1| ribosomal protein L3 [Octadecabacter antarcticus 307] gi|198254263|gb|EDY78577.1| ribosomal protein L3 [Octadecabacter antarcticus 307] Length = 278 Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 126/215 (58%), Positives = 162/215 (75%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSG++A+K+GMT ++ +GR+IPVTVL LD QVV RT +K+GY AVQ+GAG AK K Sbjct: 4 LRSGIIAKKVGMTRLFQEDGRQIPVTVLQLDKLQVVAQRTAEKDGYTAVQLGAGTAKAKR 63 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S PMRG F++ V PK+K+ EFRV ++ +L+PVG S++ GQ VDV+G +IGKGF Sbjct: 64 TSAPMRGHFAAAKVEPKRKVCEFRVSEE-NLIPVGEEIIASHYFEGQFVDVSGTSIGKGF 122 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNF GLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG ++T +NL V+ Sbjct: 123 AGAMKRHNFSGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAAKITTQNLVVI 182 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D RGLI+VKG VPG+ K W+ V+D+ K + Sbjct: 183 KTDPDRGLIMVKGAVPGS-KGGWVTVKDAVKKPAS 216 >gi|71736464|ref|YP_276706.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. phaseolicola 1448A] gi|109893538|sp|Q48D36|RL3_PSE14 RecName: Full=50S ribosomal protein L3 gi|71557017|gb|AAZ36228.1| ribosomal protein L3 [Pseudomonas syringae pv. phaseolicola 1448A] Length = 211 Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 100/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR+++ D G + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LE+V Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLELV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + + VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209 >gi|312963368|ref|ZP_07777851.1| 50S ribosomal protein L3 [Pseudomonas fluorescens WH6] gi|311282448|gb|EFQ61046.1| 50S ribosomal protein L3 [Pseudomonas fluorescens WH6] Length = 211 Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR++ D G + + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEDGD--YKAGDLINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + + VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209 >gi|332038837|gb|EGI75279.1| 50S ribosomal protein L3 [Pseudoalteromonas haloplanktis ANT/505] Length = 211 Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 93/212 (43%), Positives = 127/212 (59%), Gaps = 1/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ ++ ++ +GY A+QV AG K Sbjct: 1 MALGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRIAQIKSDATDGYNALQVTAGTKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ V + L+EFR+ + VG+ + F VDVTG + GKGF Sbjct: 61 VNKAKAGHFAKAGVEAGRGLWEFRLNGGEGDFEVGAELTVELFNEINKVDVTGTSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG MG RVT +NLE+V Sbjct: 121 QGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGHMGAERVTTQNLELV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA ++V+ + K+ Sbjct: 181 RVDAERNLLLVKGAVPGAIGGD-VIVKPAVKA 211 >gi|320322322|gb|EFW78416.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. glycinea str. B076] gi|320331980|gb|EFW87916.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. glycinea str. race 4] gi|330879369|gb|EGH13518.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. glycinea str. race 4] Length = 211 Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 101/212 (47%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR+++ D G + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV+ LEVV Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQALEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + + VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209 >gi|254283460|ref|ZP_04958428.1| ribosomal protein L3 [gamma proteobacterium NOR51-B] gi|219679663|gb|EED36012.1| ribosomal protein L3 [gamma proteobacterium NOR51-B] Length = 211 Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 99/212 (46%), Positives = 129/212 (60%), Gaps = 1/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT V+ EG +PVTV+ + +V + LD +GY A+QV AG+ K Sbjct: 1 MTIGVVGRKSGMTRVFTDEGVSVPVTVVEIAPNRVTQLKDLDTDGYRAIQVTAGDRKASK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS+ G F+ V+ L+EFR+ ++ +G+ + F GQ VDV G + GKGF Sbjct: 61 VSRAEAGHFAKAGVAAGNGLWEFRLDGSEEQFEIGAELTVERFEQGQKVDVCGQSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR NF ATHG S+SHR+ GS G Q PGRVFK KKMAG MG RVT + LEVV Sbjct: 121 QGAVKRWNFRMQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQGLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA ++V + K Sbjct: 181 RVDVERNLLLIKGAVPGAPGGD-VIVLPAVKG 211 >gi|126724861|ref|ZP_01740704.1| 50S ribosomal protein L3 [Rhodobacterales bacterium HTCC2150] gi|126706025|gb|EBA05115.1| 50S ribosomal protein L3 [Rhodobacterales bacterium HTCC2150] Length = 244 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 126/220 (57%), Positives = 165/220 (75%), Gaps = 2/220 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT ++ +GR++PVTVL LDN QVV RT +++GY AVQ+G G AK K Sbjct: 1 MRSGVIAKKVGMTRLFMEDGRQVPVTVLQLDNLQVVSQRTAERDGYTAVQLGTGLAKAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ MRG F++ V PK+K+ EFRV + +++ VG + ++ GQ+VDV+G +IGKGF Sbjct: 61 TSQAMRGHFAAAKVEPKRKVAEFRVAPE-NMINVGEEITADHYFEGQIVDVSGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV Sbjct: 120 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220 S D RGLI++KG VPG+ K W+ ++D+ K K+ Sbjct: 180 STDTDRGLIMIKGAVPGS-KGGWVTIKDAAKKPTPENVKL 218 >gi|39997949|ref|NP_953900.1| 50S ribosomal protein L3 [Geobacter sulfurreducens PCA] gi|42559575|sp|P60454|RL3_GEOSL RecName: Full=50S ribosomal protein L3 gi|39984894|gb|AAR36250.1| ribosomal protein L3 [Geobacter sulfurreducens PCA] gi|298506888|gb|ADI85611.1| ribosomal protein L3 [Geobacter sulfurreducens KN400] Length = 210 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 96/212 (45%), Positives = 133/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++A+KLGMT ++ +G+RIPVTV+ C V+ +T +GY A+QVG + + Sbjct: 1 MKKGLIAKKLGMTQIFAEDGKRIPVTVVQAGPCVVLQKKTSATDGYDAIQVGFLSQEARK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM G + + EFR+ D D VG V S F VG+ +DVTG +IGKGF Sbjct: 61 VTKPMLGHIKAAGQGAFAHIREFRLD-DVDRYNVGDVISADAFEVGEYIDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR F G R++HG S HR+ GS G P RVFKNKKM G++G RVTV+ L+VV Sbjct: 120 QGVIKRWGFRGGRSSHG-SCFHRAPGSIGSSAYPSRVFKNKKMPGQLGNERVTVQRLQVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++L+KG +PGA KN +LV+D+ K Sbjct: 179 RVDAADNILLIKGAIPGA-KNGIVLVKDTVKP 209 >gi|23014088|ref|ZP_00053925.1| COG0087: Ribosomal protein L3 [Magnetospirillum magnetotacticum MS-1] gi|83312229|ref|YP_422493.1| 50S ribosomal protein L3 [Magnetospirillum magneticum AMB-1] gi|109893435|sp|Q2W2J1|RL3_MAGMM RecName: Full=50S ribosomal protein L3 gi|82947070|dbj|BAE51934.1| Ribosomal protein L3 [Magnetospirillum magneticum AMB-1] Length = 229 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 134/215 (62%), Positives = 164/215 (76%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ +G +PVTVL +D CQVV R+++K+GY+AVQ+GAG AKVKN Sbjct: 1 MRSGLIAQKVGMTRIFTEDGTHVPVTVLKVDTCQVVSTRSVEKDGYVAVQLGAGTAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKP R F+ V PKKKL EFRV + +LL VG+ S ++F GQ VDVTG TIGKGF Sbjct: 61 VSKPARANFAKAKVEPKKKLVEFRVAPE-NLLEVGTELSAAHFIPGQYVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NF GL ATHGVS+SHRSHGSTG RQDPG+VFK KKMAG MG +VT +NL VV Sbjct: 120 AGGMKRWNFRGLEATHGVSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDEQVTTQNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 S D RGLILVKG VPG + SW+LVRD+ K + Sbjct: 180 STDADRGLILVKGSVPG-HEGSWVLVRDAVKRKLP 213 >gi|330988282|gb|EGH86385.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. lachrymans str. M301315] Length = 211 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEEADGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR+++ D G + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + + VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209 >gi|217976767|ref|YP_002360914.1| 50S ribosomal protein L3 [Methylocella silvestris BL2] gi|254803683|sp|B8ELG3|RL3_METSB RecName: Full=50S ribosomal protein L3 gi|217502143|gb|ACK49552.1| ribosomal protein L3 [Methylocella silvestris BL2] Length = 245 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 140/215 (65%), Positives = 164/215 (76%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT V+N G +PVTVL LD CQVV HRT ++NGY A+Q+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRVFNDGGEHVPVTVLKLDGCQVVAHRTKERNGYTALQLGIGRAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK RG F+ V PK KL EFRV++ DLLPVG+ + +F VGQ VDVTG +IGKGF Sbjct: 61 VSKAERGRFAIAEVEPKLKLAEFRVEE-SDLLPVGAEITADHFVVGQFVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVS+SHRSHGSTG RQDPG+ FKNKKMAG MG RVT NL+VV Sbjct: 120 AGPMKRWNFGGLRATHGVSLSHRSHGSTGGRQDPGKTFKNKKMAGHMGAERVTTLNLKVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +D +RGLILV+G VPG WI VRD+ K A+ Sbjct: 180 QLDIERGLILVEGAVPGVA-GGWIQVRDAIKRALP 213 >gi|89095538|ref|ZP_01168443.1| 50S ribosomal protein L3 [Oceanospirillum sp. MED92] gi|89080213|gb|EAR59480.1| 50S ribosomal protein L3 [Oceanospirillum sp. MED92] Length = 212 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 99/214 (46%), Positives = 135/214 (63%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK GMT V+N +G +PVTV+ ++ +V +T + +GY AVQV G K Sbjct: 1 MTVGLIGRKAGMTRVFNEDGVSVPVTVIEVEPNRVTAVKTEETDGYAAVQVTTGGKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SKP G F+ V + L+EFR+ D+ + VG + + F GQ VDVTG + GKGF Sbjct: 61 LSKPEAGNFAKAGVEAGRGLWEFRLSGGDE-VNVGEELTVARFEAGQKVDVTGQSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF ATHG S+SHR+ GS G Q PGRV+K KKMAG+MG RVTV+ LEVV Sbjct: 120 QGGVKRWNFSMQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGQMGNERVTVQTLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 VD +R L+L+KG VPGA ++V+ + K+ Sbjct: 180 RVDAERNLLLIKGAVPGATGGD-VIVKPAVKAGA 212 >gi|326793558|ref|YP_004311378.1| 50S ribosomal protein L3 [Marinomonas mediterranea MMB-1] gi|326544322|gb|ADZ89542.1| 50S ribosomal protein L3 [Marinomonas mediterranea MMB-1] Length = 212 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 96/212 (45%), Positives = 133/212 (62%), Gaps = 1/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M +V RK GMT ++N +G +PVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MAIQLVGRKAGMTRIFNEDGVSVPVTVIEVEPNRVTQVKTAETDGYSAVQVTVGERRANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ NV + L+EFR+ + + VG + + F VDVTG + GKGF Sbjct: 61 VNKAAAGHFAKANVEAGRGLWEFRLAGGEKEINVGDELTVADFESVTTVDVTGQSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRHNF ATHG S+SHR+ GS G Q PGRV+K KKMAG MG +VT ++LEVV Sbjct: 121 QGGIKRHNFSMQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGHMGAAQVTTQSLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R LILVKG VPGA N ++++ + K+ Sbjct: 181 RVDAERNLILVKGAVPGA-TNGDVVLQPAVKA 211 >gi|212634829|ref|YP_002311354.1| 50S ribosomal protein L3 [Shewanella piezotolerans WP3] gi|226730567|sp|B8CND3|RL3_SHEPW RecName: Full=50S ribosomal protein L3 gi|212556313|gb|ACJ28767.1| Ribosomal protein L3 [Shewanella piezotolerans WP3] Length = 212 Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats. Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++N +G +PVTV+ + +V +TLD +GY A+QV G K Sbjct: 1 MAIGLIGRKVGMTRIFNEDGASVPVTVIEIAANRVTQVKTLDTDGYRALQVTTGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G F+ V + L+E R+ D + + VG+ + F VDVTG + GKG Sbjct: 61 ITKPEAGHFAKAGVEAGRGLWELRLADGDGEGIEVGAELNVDIFADIAKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF THG S++HRS+GS G Q PGRVFK KKM+G MG RVT +NL++ Sbjct: 121 FQGGIKRWNFHAQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LVKG VPGA I ++ + K+ Sbjct: 181 VRVDAERNLLLVKGAVPGATNGDLI-IKPAVKA 212 >gi|331018160|gb|EGH98216.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 211 Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats. Identities = 99/212 (46%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR+++ + G + F GQLVDV G + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGE--YQAGDQINAEIFAAGQLVDVAGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + + VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209 >gi|290477192|ref|YP_003470107.1| 50S ribosomal subunit protein L3 [Xenorhabdus bovienii SS-2004] gi|289176540|emb|CBJ83349.1| 50S ribosomal subunit protein L3 [Xenorhabdus bovienii SS-2004] Length = 210 Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats. Identities = 94/210 (44%), Positives = 132/210 (62%), Gaps = 1/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPV+V+ ++ ++ + + +GY A+QV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVSVIEIEENRITQVKDQESDGYRAIQVTTGSKKANRVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L EFR+ DD+ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRTLREFRLSLDDEEYTVGQSISVEIFANVKKVDVTGTSKGKGFAG 121 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV V Sbjct: 122 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRV 181 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 182 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 210 >gi|85703987|ref|ZP_01035090.1| 50S ribosomal protein L3 [Roseovarius sp. 217] gi|85671307|gb|EAQ26165.1| 50S ribosomal protein L3 [Roseovarius sp. 217] Length = 280 Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats. Identities = 119/215 (55%), Positives = 161/215 (74%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSGV+A+K+GMT ++ +G+++PVTVL LD QVV RT +K+GY AVQ+GAG AK K Sbjct: 2 LRSGVIAKKVGMTRLFLEDGKQVPVTVLQLDKLQVVAQRTPEKDGYTAVQLGAGTAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++ MRG F++ V PK+K+ EFRV + +++ VG + ++ GQ VDV+G +IGKGF Sbjct: 62 TTQAMRGHFAAAKVEPKRKIAEFRVAPE-NMINVGEEITADHYFEGQFVDVSGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG +VT +NL+V+ Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAAKVTTQNLQVI 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D RGLI++KG VPG+ K W+ ++D+ K Sbjct: 181 KTDADRGLIMIKGAVPGS-KGGWVTIKDAVKKPFP 214 >gi|170723906|ref|YP_001751594.1| 50S ribosomal protein L3 [Pseudomonas putida W619] gi|226730552|sp|B1JDW4|RL3_PSEPW RecName: Full=50S ribosomal protein L3 gi|169761909|gb|ACA75225.1| ribosomal protein L3 [Pseudomonas putida W619] Length = 211 Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats. Identities = 101/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + ++EFR+++ + G FT GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRGVWEFRLEEGE--FQAGDSIKAELFTAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGDVV-VRPAVKA 209 >gi|162149174|ref|YP_001603635.1| 50S ribosomal protein L3 [Gluconacetobacter diazotrophicus PAl 5] gi|209545082|ref|YP_002277311.1| 50S ribosomal protein L3 [Gluconacetobacter diazotrophicus PAl 5] gi|189042847|sp|A9H3R5|RL3_GLUDA RecName: Full=50S ribosomal protein L3 gi|161787751|emb|CAP57347.1| 50S ribosomal protein L3 [Gluconacetobacter diazotrophicus PAl 5] gi|209532759|gb|ACI52696.1| ribosomal protein L3 [Gluconacetobacter diazotrophicus PAl 5] Length = 227 Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats. Identities = 132/219 (60%), Positives = 164/219 (74%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+KLGMT ++ +G +PVTVLH+DN QVV RT D++GY AVQ+G G AKVKN Sbjct: 1 MRTGLIAKKLGMTRLFKEDGTHVPVTVLHVDNLQVVDVRTQDRDGYTAVQLGFGNAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKP RG F+ V V PKKKL EFRV DD +L G+ S ++F VGQ VDVT + GKGF Sbjct: 61 VSKPNRGHFARVKVEPKKKLAEFRV-ADDAVLEAGATLSAAHFVVGQKVDVTSTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NF GL A+HGVSISHRSHGSTG RQDPG+ FKNKKMAG +G RVT NLEV Sbjct: 120 AGAMKRWNFAGLEASHGVSISHRSHGSTGNRQDPGKTFKNKKMAGHLGSERVTTLNLEVA 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 +VD ++ L++V+G VPG KN +LVRD+ K A + + Sbjct: 180 AVDAEKNLLMVRGSVPGG-KNELVLVRDAIKKARHAEAP 217 >gi|254488658|ref|ZP_05101863.1| ribosomal protein L3 [Roseobacter sp. GAI101] gi|214045527|gb|EEB86165.1| ribosomal protein L3 [Roseobacter sp. GAI101] Length = 294 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 128/215 (59%), Positives = 159/215 (73%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSGV+A+K+GMT ++ +G++IPVTVL LD QVV RT +++GY AVQ+GAG AKVK Sbjct: 2 LRSGVIAKKMGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTTERDGYTAVQLGAGTAKVKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S PMRG F++ V PK+K+ EFRV + +L VG ++ GQ VDV G +IGKGF Sbjct: 62 TSAPMRGHFAAAKVEPKRKVAEFRVDPE-AMLNVGEEIIADHYFAGQYVDVAGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRATHGVS+SHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 121 AGAMKRHNFGGLRATHGVSVSHRSHGSTGQCQDPGKVFKGKKMAGHMGSARVTTQNLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D RGLI+VKG VPG+ K W+ V+D+ K Sbjct: 181 KTDTVRGLIMVKGAVPGS-KGGWVTVKDAVKKPFP 214 >gi|157960014|ref|YP_001500048.1| 50S ribosomal protein L3 [Shewanella pealeana ATCC 700345] gi|189029481|sp|A8GYX6|RL3_SHEPA RecName: Full=50S ribosomal protein L3 gi|157845014|gb|ABV85513.1| ribosomal protein L3 [Shewanella pealeana ATCC 700345] Length = 212 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 94/213 (44%), Positives = 132/213 (61%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++N +G +PVTV+ + +V RTLD +GY A+QV G K Sbjct: 1 MAIGLIGRKVGMTRIFNEDGASVPVTVIEIAANRVTQVRTLDTDGYRALQVTTGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G F+ V + L+E R+ + + + VG+ + F VDVTG + GKG Sbjct: 61 ITKPEAGHFAKAGVEAGRGLWEMRLADGEGEGIEVGAELNVDIFADIAKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S++HR++GS G Q PGRVFK KKM+G MG RVT +NLEV Sbjct: 121 FQGGIKRWNFATQDATHGNSLAHRANGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + VD +R L+LVKG VPGA I ++ + K+ Sbjct: 181 IRVDAERNLLLVKGAVPGATNGDLI-IKPAVKA 212 >gi|260752974|ref|YP_003225867.1| 50S ribosomal protein L3 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552337|gb|ACV75283.1| ribosomal protein L3 [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 242 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 126/219 (57%), Positives = 164/219 (74%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR +PVTVL L++ QVV + D++GY+AVQ+GAG AK KN Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHVPVTVLKLEDVQVVAVKNKDQDGYVAVQLGAGSAKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP+RG F+ V K KL EF V +D +L VG+ S +F GQLVD++G T GKGF Sbjct: 61 VTKPVRGHFAKAEVELKAKLVEFPVSED-AVLEVGTSISADHFIAGQLVDISGQTQGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR FGGLRATHGVS+SHRSHGSTG RQDPGRVFKNKKMAG MG + T +NLEV+ Sbjct: 120 AGAMKRWGFGGLRATHGVSLSHRSHGSTGNRQDPGRVFKNKKMAGHMGARQRTQQNLEVI 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 S D +R LI V+G VPG+ K +W+++RD+ K A + Sbjct: 180 STDAERDLIFVRGSVPGS-KGAWLIIRDAVKVARPTEAP 217 >gi|83854978|ref|ZP_00948508.1| 50S ribosomal protein L3 [Sulfitobacter sp. NAS-14.1] gi|83842821|gb|EAP81988.1| 50S ribosomal protein L3 [Sulfitobacter sp. NAS-14.1] Length = 280 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 128/218 (58%), Positives = 158/218 (72%), Gaps = 2/218 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSGV+A+K+GMT ++ +G++IPVTVL LD QVV RT +K+GY AVQ+GAG AK K Sbjct: 2 LRSGVIAKKMGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTPEKDGYTAVQLGAGTAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ MRG F++ V PK+K+ EFRV + +L VG ++ GQ VDV G +IGKGF Sbjct: 62 TSQAMRGHFAAAKVEPKRKVAEFRVDPE-AMLNVGEEIIADHYFAGQYVDVAGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 D RGLI+VKG VPG+ K W+ V+D+ K Sbjct: 181 KTDSARGLIMVKGAVPGS-KGGWVTVKDAVKKPFPADA 217 >gi|83941500|ref|ZP_00953962.1| 50S ribosomal protein L3 [Sulfitobacter sp. EE-36] gi|83847320|gb|EAP85195.1| 50S ribosomal protein L3 [Sulfitobacter sp. EE-36] Length = 280 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 128/218 (58%), Positives = 158/218 (72%), Gaps = 2/218 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSGV+A+K+GMT ++ +G++IPVTVL LD QVV RT +K+GY AVQ+GAG AK K Sbjct: 2 LRSGVIAKKMGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTPEKDGYTAVQLGAGTAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ MRG F++ V PK+K+ EFRV + +L VG ++ GQ VDV G +IGKGF Sbjct: 62 TSQAMRGHFAAAKVEPKRKVAEFRVDPE-AMLNVGEEIIADHYFAGQYVDVAGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 D RGLI+VKG VPG+ K W+ V+D+ K Sbjct: 181 KTDSARGLIMVKGAVPGS-KGGWVTVKDAVKKPFPADA 217 >gi|289209329|ref|YP_003461395.1| 50S ribosomal protein L3 [Thioalkalivibrio sp. K90mix] gi|288944960|gb|ADC72659.1| 50S ribosomal protein L3 [Thioalkalivibrio sp. K90mix] Length = 214 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 102/213 (47%), Positives = 142/213 (66%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RKLGM+ V+ +G +PVTVL +DN +VV + + +GY AVQV AG K Sbjct: 1 MAIGLIGRKLGMSRVFTDDGVSVPVTVLQVDNNRVVQIKRSEGDGYNAVQVTAGARKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 VSKP G +++ +V P + L+EFRV+ D+ + L G + F GQ+VDVT + GKG Sbjct: 61 VSKPEAGHYAAASVEPGRGLWEFRVEADELEGLAPGDAITVDRFEEGQVVDVTSQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F GA+KRHNF ATHG S++HR+ GS G Q PGRVFK KKMAG MG R T++NL+V Sbjct: 121 FQGAVKRHNFRTQDATHGNSLAHRAPGSIGQNQSPGRVFKGKKMAGHMGAERKTIQNLKV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD R L+L++G VPGA ++ +++R + K+ Sbjct: 181 VRVDADRSLVLIQGAVPGAP-STDVMIRPAVKA 212 >gi|254461019|ref|ZP_05074435.1| ribosomal protein L3 [Rhodobacterales bacterium HTCC2083] gi|206677608|gb|EDZ42095.1| ribosomal protein L3 [Rhodobacteraceae bacterium HTCC2083] Length = 241 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 130/215 (60%), Positives = 162/215 (75%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ +G+ IPVTVL LD QVV RT DK+GY AVQ+GAG AK K Sbjct: 1 MRSGIIAKKVGMTRLFMEDGKAIPVTVLQLDALQVVAQRTSDKDGYTAVQLGAGTAKAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ MRG F++ V+PK+K+ EFRV +D +L+ VG S ++ GQ VDV+G +IGKGF Sbjct: 61 TSQAMRGHFAAAKVAPKRKVAEFRVSED-NLINVGEEISAEHYLEGQKVDVSGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 120 QGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D RGLI++KG VPG+ K W+ V+D+ K + Sbjct: 180 KTDADRGLIMIKGAVPGS-KGGWVTVKDAVKKKMP 213 >gi|167626039|ref|YP_001676333.1| 50S ribosomal protein L3 [Shewanella halifaxensis HAW-EB4] gi|189029480|sp|B0TM12|RL3_SHEHH RecName: Full=50S ribosomal protein L3 gi|167356061|gb|ABZ78674.1| ribosomal protein L3 [Shewanella halifaxensis HAW-EB4] Length = 212 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 95/213 (44%), Positives = 132/213 (61%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++N +G +PVTV+ + +V RTLD +GY A+QV G K Sbjct: 1 MAIGLIGRKVGMTRIFNEDGASVPVTVIEIAANRVTQVRTLDTDGYRALQVTTGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G F+ V + L+E R+ + + + VG+ + F VDVTG + GKG Sbjct: 61 ITKPEAGHFAKAGVEAGRGLWEMRLADGEGEGIEVGAELNVDIFADIAKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S++HRS+GS G Q PGRVFK KKM+G MG RVT +NLEV Sbjct: 121 FQGGIKRWNFAMQDATHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + VD +R L+LVKG VPGA I ++ + K+ Sbjct: 181 IRVDAERNLLLVKGAVPGATNGDLI-IKPAVKA 212 >gi|77461300|ref|YP_350807.1| 50S ribosomal protein L3 [Pseudomonas fluorescens Pf0-1] gi|109893541|sp|Q3K5Y8|RL3_PSEPF RecName: Full=50S ribosomal protein L3 gi|77385303|gb|ABA76816.1| 50S ribosomal protein L3 [Pseudomonas fluorescens Pf0-1] Length = 211 Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats. Identities = 100/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKAGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR+++ + G + + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGE--YQAGDLINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + + VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209 >gi|92112554|ref|YP_572482.1| 50S ribosomal protein L3P [Chromohalobacter salexigens DSM 3043] gi|123387627|sp|Q1R0H5|RL3_CHRSD RecName: Full=50S ribosomal protein L3 gi|91795644|gb|ABE57783.1| LSU ribosomal protein L3P [Chromohalobacter salexigens DSM 3043] Length = 212 Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats. Identities = 94/212 (44%), Positives = 136/212 (64%), Gaps = 1/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V +K GMT ++ G +PVTV+ ++ +V +T++ +GY AVQV +G K K+ Sbjct: 1 MTIGLVGKKSGMTRIFTENGASVPVTVIEVEPNRVTRVKTVESDGYSAVQVTSGSRKAKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++K G ++ V + L EFR+ + ++ VG + S F GQ VDVTG + GKGF Sbjct: 61 LTKAAAGQYAKSGVEAGRSLMEFRLAEGEEAPEVGGNITVSLFEAGQKVDVTGTSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR NF HG S++HR+ GS G Q PGRVFK KKMAG++G RVTV++LE+V Sbjct: 121 QGAVKRWNFRTQDNGHGNSLAHRAPGSIGQCQTPGRVFKGKKMAGQLGNERVTVQSLEIV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + ++VR + K+ Sbjct: 181 RVDAERNLLLVKGAVPGA-TDCEVIVRSAVKA 211 >gi|300721365|ref|YP_003710636.1| 50S ribosomal subunit protein L3 [Xenorhabdus nematophila ATCC 19061] gi|297627853|emb|CBJ88399.1| 50S ribosomal subunit protein L3 [Xenorhabdus nematophila ATCC 19061] Length = 210 Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 132/210 (62%), Gaps = 1/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++N +V + + +GY A+QV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKNDETDGYRAIQVTTGSKKANRVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F+ V + L EFR+ + D VG S F + VDVTG + GKGF+G Sbjct: 62 KSEAGHFAKAGVEAGRILREFRLSEGDAEFTVGQSISVEIFADVKKVDVTGTSKGKGFAG 121 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 122 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 181 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA NS ++V+ + K+ Sbjct: 182 DAERNLLLVKGAVPGA-TNSNLIVKPAVKA 210 >gi|167039520|ref|YP_001662505.1| 50S ribosomal protein L3 [Thermoanaerobacter sp. X514] gi|300915229|ref|ZP_07132544.1| 50S ribosomal protein L3 [Thermoanaerobacter sp. X561] gi|307725153|ref|YP_003904904.1| 50S ribosomal protein L3 [Thermoanaerobacter sp. X513] gi|226730583|sp|B0K5P3|RL3_THEPX RecName: Full=50S ribosomal protein L3 gi|166853760|gb|ABY92169.1| ribosomal protein L3 [Thermoanaerobacter sp. X514] gi|300888953|gb|EFK84100.1| 50S ribosomal protein L3 [Thermoanaerobacter sp. X561] gi|307582214|gb|ADN55613.1| 50S ribosomal protein L3 [Thermoanaerobacter sp. X513] Length = 210 Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats. Identities = 95/212 (44%), Positives = 129/212 (60%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ RK GMT +++ +G IPVTV+ C VV +T++ +GY A+QVG G+ K K Sbjct: 1 MKKGILGRKHGMTQIFDEKGEVIPVTVIEAGPCVVVQKKTVETDGYNAIQVGFGDVKEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+ G F V K+ L EFR+ D VGS F G V+VTG++ GKGF Sbjct: 61 LTKPLIGHFKKAGVPFKRYLREFRLD-DISGYEVGSEIKVDIFKPGDRVNVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR+ +HG S HR GS DPGR FK K M G MG RVT++NLEVV Sbjct: 120 AGVVKRYGANRGPMSHG-SKYHRRVGSMSATTDPGRTFKGKIMPGHMGHERVTIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + L+LVKG VPG K S ++++DS KS Sbjct: 179 KVDPELNLLLVKGSVPGP-KGSLLIIKDSVKS 209 >gi|170738703|ref|YP_001767358.1| 50S ribosomal protein L3 [Methylobacterium sp. 4-46] gi|226730536|sp|B0UHW9|RL3_METS4 RecName: Full=50S ribosomal protein L3 gi|168192977|gb|ACA14924.1| ribosomal protein L3 [Methylobacterium sp. 4-46] Length = 246 Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats. Identities = 133/220 (60%), Positives = 162/220 (73%), Gaps = 2/220 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G +PVTVL +D CQVV HRT++KNGY+A+QVG G+AKVKN Sbjct: 1 MRSGVIAQKVGMTRVFTDAGEHVPVTVLKVDQCQVVAHRTVEKNGYVALQVGVGKAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK RG F+ V PK+KL EFRV +D L+PVG+ + +F GQ VDVTG T GKGF Sbjct: 61 VSKAERGRFAIAKVEPKRKLAEFRVTED-ALIPVGAEITADHFIPGQFVDVTGTTTGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G RVT +NL VV Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220 D +RGLILV+G VPG WI +RD+ K + + + Sbjct: 180 RTDPERGLILVEGAVPGVA-GGWIQIRDAVKRKLPAEAPM 218 >gi|167645578|ref|YP_001683241.1| 50S ribosomal protein L3 [Caulobacter sp. K31] gi|189042835|sp|B0T2C2|RL3_CAUSK RecName: Full=50S ribosomal protein L3 gi|167348008|gb|ABZ70743.1| ribosomal protein L3 [Caulobacter sp. K31] Length = 256 Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats. Identities = 120/215 (55%), Positives = 155/215 (72%), Gaps = 2/215 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GV+A+KLGMT ++ G+ +PVTVL LD CQV RT++K+GY A+Q+GAG K KN Sbjct: 7 RTGVIAKKLGMTRFFDETGQHVPVTVLSLDGCQVTAQRTVEKDGYTALQLGAGAKKPKNT 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 MRG F+ +V PK+ + EFRV + L+ VG+ F+ ++ GQ VD+ G+T+GKGF+ Sbjct: 67 PNAMRGHFAKNSVEPKRIVAEFRVDE-AALIEVGAEFTADHYVAGQKVDIQGITVGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 GAMKR NF GLRATHGVS+SHRSHGSTG RQDPGR FK KKMAG +G VT N+ V Sbjct: 126 GAMKRWNFSGLRATHGVSVSHRSHGSTGQRQDPGRTFKGKKMAGHLGQETVTTLNVTVWK 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 VD +RGLILVKG VPG++ S++ VRD+ K A Sbjct: 186 VDVERGLILVKGAVPGSE-GSYVKVRDAIKKAAPA 219 >gi|114771269|ref|ZP_01448689.1| 50S ribosomal protein L3 [alpha proteobacterium HTCC2255] gi|114548194|gb|EAU51081.1| 50S ribosomal protein L3 [alpha proteobacterium HTCC2255] Length = 247 Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats. Identities = 126/215 (58%), Positives = 159/215 (73%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT ++ +G+++PVTVL ++N QVV RT + +GY AVQ+GAG AK K Sbjct: 1 MRSGVIAKKIGMTRLFMEDGKQVPVTVLQMENLQVVSQRTNETDGYTAVQLGAGVAKAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S MRG F+ V PK+K+ EFRV D +L+ VG ++F GQ VDV+G +IGKGF Sbjct: 61 QSAAMRGHFAKAKVEPKRKIAEFRVSAD-NLIEVGEEIVANHFLDGQKVDVSGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRATHGVS+SHRSHGSTG Q+PG+VFK KKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRHNFGGLRATHGVSVSHRSHGSTGQCQEPGKVFKGKKMAGHMGSARVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D RGLI++KG VPG+ K W+ V+DS K Sbjct: 180 RTDIDRGLIMIKGAVPGS-KGGWVTVKDSVKKKAP 213 >gi|157377449|ref|YP_001476049.1| 50S ribosomal protein L3 [Shewanella sediminis HAW-EB3] gi|189029482|sp|A8G1E8|RL3_SHESH RecName: Full=50S ribosomal protein L3 gi|157319823|gb|ABV38921.1| ribosomal protein L3 [Shewanella sediminis HAW-EB3] Length = 212 Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats. Identities = 92/213 (43%), Positives = 132/213 (61%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G IPVTV+ + + +V +TL+ +GY A+QV G K Sbjct: 1 MAIGLIGRKVGMTRIFAEDGVSIPVTVIEIASNRVTQVKTLETDGYRALQVTTGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G F+ V + L+E R+ + + + VG+ + F VDVTG + GKG Sbjct: 61 ITKPEAGHFAKAGVEAGRGLWEVRLADGEGESIEVGAELNVDIFADVAKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF THG S++HRS+GS G Q PGRVFK KKM+G MG RVT +NL+V Sbjct: 121 FQGGIKRWNFHAQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LVKG VPGA + I ++ + K+ Sbjct: 181 VRVDAERNLLLVKGAVPGATNGNLI-IKPAVKA 212 >gi|87122971|ref|ZP_01078832.1| 50S ribosomal subunit protein L3 [Marinomonas sp. MED121] gi|86161739|gb|EAQ63043.1| 50S ribosomal subunit protein L3 [Marinomonas sp. MED121] Length = 212 Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats. Identities = 95/212 (44%), Positives = 132/212 (62%), Gaps = 1/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M +V RK GMT ++N +G +PVTV+ ++ +V +T D +GY AVQV G + Sbjct: 1 MAIQLVGRKAGMTRIFNEDGVSVPVTVIEVEPNRVTQVKTADTDGYTAVQVTVGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ V + L+EFR+ D+ + VG + + F VDV G + GKGF Sbjct: 61 VNKAAAGHFAKAKVEAGRGLWEFRLSGDEKEINVGDELTVADFESIATVDVIGQSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRHNF ATHG S+SHR+ GS G Q PGRV+K KKMAG MG +VT ++LEVV Sbjct: 121 QGAIKRHNFSMQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGHMGAAQVTTQSLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R LI+VKG VPGA N ++++ + K+ Sbjct: 181 RVDLERNLIIVKGAVPGA-TNGDVILQPAVKA 211 >gi|104779755|ref|YP_606253.1| 50S ribosomal protein L3 [Pseudomonas entomophila L48] gi|123079277|sp|Q1IFW6|RL3_PSEE4 RecName: Full=50S ribosomal protein L3 gi|95108742|emb|CAK13436.1| 50S ribosomal subunit protein L3 [Pseudomonas entomophila L48] Length = 211 Score = 270 bits (692), Expect = 7e-71, Method: Composition-based stats. Identities = 101/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKAGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + ++EFR+++ D G + FT GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRGVWEFRLEEGD--FQAGDLIKAELFTAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA + VR + K+ Sbjct: 179 RVDAERNLLLIKGAVPGATGGDVV-VRPAVKA 209 >gi|289623849|ref|ZP_06456803.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330869431|gb|EGH04140.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 211 Score = 270 bits (692), Expect = 7e-71, Method: Composition-based stats. Identities = 101/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ +++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIESNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR+++ D G + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + + VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209 >gi|56551413|ref|YP_162252.1| 50S ribosomal protein L3 [Zymomonas mobilis subsp. mobilis ZM4] gi|241761060|ref|ZP_04759149.1| ribosomal protein L3 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|81820917|sp|Q5NQ64|RL3_ZYMMO RecName: Full=50S ribosomal protein L3 gi|56542987|gb|AAV89141.1| ribosomal protein L3 [Zymomonas mobilis subsp. mobilis ZM4] gi|241374679|gb|EER64140.1| ribosomal protein L3 [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 242 Score = 270 bits (692), Expect = 7e-71, Method: Composition-based stats. Identities = 126/219 (57%), Positives = 163/219 (74%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR +PVTVL L++ QVV + D++GY+AVQ+GAG AK KN Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHVPVTVLKLEDVQVVAVKNKDQDGYVAVQLGAGSAKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP+RG F+ V K KL EF V +D +L VG+ S +F GQLVD++G T GKGF Sbjct: 61 VTKPVRGHFAKAEVELKAKLVEFPVSED-AVLEVGTSISADHFIAGQLVDISGQTQGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR FGGLRATHGVS+SHRSHGSTG RQDPGRVFKNKKMAG MG + T +NLEV+ Sbjct: 120 AGAMKRWGFGGLRATHGVSLSHRSHGSTGNRQDPGRVFKNKKMAGHMGARQRTQQNLEVI 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 S D +R LI V+G VPG+ K +W+++RD+ K A Sbjct: 180 STDAERDLIFVRGSVPGS-KGAWLIIRDAVKVARPTDAP 217 >gi|99080087|ref|YP_612241.1| 50S ribosomal protein L3 [Ruegeria sp. TM1040] gi|123077810|sp|Q1GK37|RL3_SILST RecName: Full=50S ribosomal protein L3 gi|99036367|gb|ABF62979.1| LSU ribosomal protein L3P [Ruegeria sp. TM1040] Length = 239 Score = 270 bits (692), Expect = 7e-71, Method: Composition-based stats. Identities = 133/215 (61%), Positives = 161/215 (74%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ +G++IPVTVL LD QVV RT DK+GY AVQ+GAG AKVK Sbjct: 1 MRSGIIAKKVGMTRLFMEDGKQIPVTVLSLDGLQVVAQRTEDKDGYTAVQLGAGSAKVKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK MRG F++ V PK+KL EFRV D L+ VG+ S +F GQ VDVTG +IGKGF Sbjct: 61 VSKAMRGHFAASKVEPKRKLVEFRV-PADGLIEVGAEISAEHFLEGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D RGL+ +KG VPG K+ W+ V+D+ K Sbjct: 180 KTDADRGLVFIKGAVPGP-KSGWVTVKDAVKKKAP 213 >gi|197104696|ref|YP_002130073.1| 50S ribosomal protein L3 [Phenylobacterium zucineum HLK1] gi|226730544|sp|B4R8L7|RL3_PHEZH RecName: Full=50S ribosomal protein L3 gi|196478116|gb|ACG77644.1| 50S ribosomal protein L3 [Phenylobacterium zucineum HLK1] Length = 261 Score = 270 bits (692), Expect = 7e-71, Method: Composition-based stats. Identities = 125/219 (57%), Positives = 158/219 (72%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+KLGM ++ G +PVTVL L+ CQVV HRT DK+GY+A+Q+GAG K KN Sbjct: 1 MRTGVIAKKLGMARFFDEAGVHVPVTVLSLEGCQVVAHRTKDKDGYVALQLGAGSKKPKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK +RG F+ V PK KL EF+V +D +L+ VG+ + +F GQ VD+TG T+GKGF Sbjct: 61 TSKGLRGHFAKGQVEPKAKLVEFKVSED-NLIDVGAELTADHFVPGQKVDITGTTVGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F KKMAG G VT NL V Sbjct: 120 AGAMKRWNFGGLRATHGVSVSHRSHGSTGQRQDPGRTFPGKKMAGHYGQETVTTLNLTVW 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 VD +RGLILVKG VPG + +++ +RD+ K+A+ Sbjct: 180 RVDAERGLILVKGAVPGTE-GTFVKIRDAVKAALPADAP 217 >gi|254483423|ref|ZP_05096652.1| ribosomal protein L3 [marine gamma proteobacterium HTCC2148] gi|214036297|gb|EEB76975.1| ribosomal protein L3 [marine gamma proteobacterium HTCC2148] Length = 211 Score = 270 bits (692), Expect = 7e-71, Method: Composition-based stats. Identities = 100/212 (47%), Positives = 130/212 (61%), Gaps = 1/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT V+ +G IPVTV+ + +V + L+ +GY A+QV G K Sbjct: 1 MAIGLVGRKSGMTRVFTEDGASIPVTVVEVSPNRVTQIKELETDGYRAIQVTTGNRKASK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK G F+ V KL EFR++ D+ VG + F VGQ+VDVTG + GKGF Sbjct: 61 VSKSEAGHFAKAGVEAGTKLSEFRLEASDEAPEVGVELTVERFEVGQIVDVTGKSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF ATHG SISHR++GS G Q PGRVFK KKM+G MG +VT + LEV+ Sbjct: 121 QGGIKRWNFTMQDATHGNSISHRANGSIGQCQTPGRVFKGKKMSGHMGSEQVTTQGLEVI 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA + VR + K+ Sbjct: 181 RVDAERNLLLIKGAVPGAPGGDVV-VRPTVKA 211 >gi|163752594|ref|ZP_02159773.1| ribosomal protein L3 [Shewanella benthica KT99] gi|161327506|gb|EDP98713.1| ribosomal protein L3 [Shewanella benthica KT99] Length = 212 Score = 270 bits (692), Expect = 7e-71, Method: Composition-based stats. Identities = 92/213 (43%), Positives = 133/213 (62%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G +PVTV+ + + +V +TL+ +GY A+QV G K Sbjct: 1 MAIGLIGRKVGMTRIFCEDGVSVPVTVIEITSNRVTQVKTLETDGYRALQVTTGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G F+ V + L+E R+ D+ + + VG+ + F VDVTG + GKG Sbjct: 61 ITKPEAGHFAKAGVEAGRGLWEVRLADDEGEGIEVGAELNVDIFADIAKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF THG S+SHRS+GS G Q PGRVFK KKM+G MG RVT +NL+V Sbjct: 121 FQGGIKRWNFHAQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + VD +R L+LVKG VPGA + I ++ + K+ Sbjct: 181 IRVDAERNLLLVKGAVPGAINGNLI-IKPAVKA 212 >gi|294085958|ref|YP_003552718.1| 50S ribosomal protein L3 [Candidatus Puniceispirillum marinum IMCC1322] gi|292665533|gb|ADE40634.1| 50S ribosomal protein L3 [Candidatus Puniceispirillum marinum IMCC1322] Length = 275 Score = 270 bits (692), Expect = 7e-71, Method: Composition-based stats. Identities = 134/212 (63%), Positives = 160/212 (75%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++ARKLGMT V+N G +PVTVL +D+ QVV R +GY AVQ+GAG AK KN Sbjct: 1 MRSGIIARKLGMTRVFNEAGHHVPVTVLKMDDVQVVSVRNKQVDGYTAVQLGAGMAKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKPMRG F+ NV PK KL EFRV DD +L VG+ PS+F GQ VDV G T GKGF Sbjct: 61 VSKPMRGHFAKANVLPKSKLVEFRVS-DDAVLDVGATLVPSHFVAGQKVDVVGTTQGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNF GLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG R T +N+EVV Sbjct: 120 AGAMKRHNFAGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRNTTQNIEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +VDD+ G++L+ G VPG KN W+L+ D+ K+ Sbjct: 180 AVDDEEGVVLLCGAVPGP-KNGWVLISDAIKA 210 >gi|49475794|ref|YP_033835.1| 50S ribosomal protein L3 [Bartonella henselae str. Houston-1] gi|81827700|sp|Q6G2W5|RL3_BARHE RecName: Full=50S ribosomal protein L3 gi|49238601|emb|CAF27842.1| 50S ribosomal protein l3 [Bartonella henselae str. Houston-1] Length = 246 Score = 270 bits (692), Expect = 8e-71, Method: Composition-based stats. Identities = 133/219 (60%), Positives = 164/219 (74%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT +YN G +PVTVL L+NCQVV RT++KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLENCQVVAQRTVEKNGYTAVQLGVGFAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ +RG F+ +V PK K+ EFRV D +LL +G+ + +F GQ VDVTG TIGKGF Sbjct: 61 TSQALRGHFAKASVEPKAKIAEFRVSPD-NLLDIGTEITAEHFVPGQRVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNIEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 S D +RGLILV+G V G+ K +WILVRD+ K + Sbjct: 180 STDVERGLILVRGAVSGS-KGAWILVRDAIKKPLPDNAP 217 >gi|212288598|sp|A5V602|RL3_SPHWW RecName: Full=50S ribosomal protein L3 Length = 251 Score = 270 bits (692), Expect = 8e-71, Method: Composition-based stats. Identities = 125/215 (58%), Positives = 156/215 (72%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR +PVTVL L+N QVV R D++GY+AVQ+GAG AK KN Sbjct: 1 MRTGVIAKKMGMTRLFQEDGRHVPVTVLALENVQVVARREQDRDGYVAVQLGAGSAKPKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP RG F V PK + EFRV +D LL VG+ S ++ GQ VD+ G T GKGF Sbjct: 61 LTKPERGHFGKAEVEPKAFVAEFRVSED-GLLDVGAEISADHYVAGQFVDIQGSTQGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR FGGLRATHGVS+SHRS GSTG RQDPG+VFKNKKMAG MG T +NLE+V Sbjct: 120 AGGMKRWGFGGLRATHGVSVSHRSLGSTGQRQDPGKVFKNKKMAGHMGDKNRTQQNLEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D +RGL+ VKG VPG+ K W+LV+DS K A Sbjct: 180 QTDAERGLLFVKGSVPGS-KGGWLLVKDSVKIAAP 213 >gi|225024790|ref|ZP_03713982.1| hypothetical protein EIKCOROL_01677 [Eikenella corrodens ATCC 23834] gi|224942497|gb|EEG23706.1| hypothetical protein EIKCOROL_01677 [Eikenella corrodens ATCC 23834] Length = 214 Score = 270 bits (692), Expect = 8e-71, Method: Composition-based stats. Identities = 101/212 (47%), Positives = 131/212 (61%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V+ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFTEQGVSVPVTVLEMSPNRVTQVKSKDTDGYAAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ L VG + + F GQ VDVTG + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLHEFALTEEKLAELKVGDEVTVAIFEAGQFVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRHNFG RA+HG S SHR GS G QDPGRVF K+MAG+ G TV+ LEV Sbjct: 121 FAGTIKRHNFGAQRASHGNSRSHRVPGSIGMNQDPGRVFPGKRMAGQYGNTTATVQRLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPGA N ++VR S K Sbjct: 181 VRVDAERNLLLVKGAVPGAA-NGDVVVRPSVK 211 >gi|330940885|gb|EGH43842.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. pisi str. 1704B] Length = 211 Score = 270 bits (692), Expect = 8e-71, Method: Composition-based stats. Identities = 100/212 (47%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG I VTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIAVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ G F+ NV+ + + EFR+++ D G + F GQLVDVTG + GKGF Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA + + VR + K+ Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209 >gi|127511092|ref|YP_001092289.1| 50S ribosomal protein L3 [Shewanella loihica PV-4] gi|166234593|sp|A3Q982|RL3_SHELP RecName: Full=50S ribosomal protein L3 gi|126636387|gb|ABO22030.1| LSU ribosomal protein L3P [Shewanella loihica PV-4] Length = 212 Score = 270 bits (692), Expect = 8e-71, Method: Composition-based stats. Identities = 91/213 (42%), Positives = 131/213 (61%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G IPVTV+ + +V +TL+ +GY A+Q+ G K Sbjct: 1 MAIGLIGRKVGMTRIFTEDGASIPVTVIEIAANRVAQVKTLETDGYRALQITTGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G F+ V + L+E R+ + + + VG+ + F VDVTG + GKG Sbjct: 61 ITKPEAGHFAKAGVEAGRGLWEMRLADGEGEGIEVGAELNVDIFADVAKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S++HR++GS G Q PGRVFK KKM+G MG RVT +NL+V Sbjct: 121 FQGGIKRWNFRTQDATHGNSLAHRANGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LVKG VPGA I ++ + K+ Sbjct: 181 VRVDAERNLLLVKGAVPGATNGDLI-IKPAVKA 212 >gi|212288260|sp|A8IAS6|RL3_AZOC5 RecName: Full=50S ribosomal protein L3 Length = 241 Score = 270 bits (692), Expect = 8e-71, Method: Composition-based stats. Identities = 133/219 (60%), Positives = 162/219 (73%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT ++ G +PVTVL +++CQVV HRTLDKNGY+AVQ+GAG+ K KN Sbjct: 1 MRSGVIAQKLGMTRIFTDAGEHLPVTVLKVESCQVVAHRTLDKNGYVAVQLGAGKRKPKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +K RG F+ V PK+KL EFRV D L+PVG+ + +F VGQ VDVTG TIGKGF Sbjct: 61 TNKAERGQFARAEVEPKRKLAEFRVDAD-ALIPVGAEITADHFVVGQYVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGGLRA+HGVSISHRS GSTG RQDPG+ FKNKKM G MG VT +NL+VV Sbjct: 120 AGGMKRHNFGGLRASHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGDVTVTTQNLKVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 D +RGLI V+G VPG WI+VRD+ K + + Sbjct: 180 MTDVERGLIAVEGAVPG-HAGGWIMVRDAVKKRLPSEAP 217 >gi|158424178|ref|YP_001525470.1| 50S ribosomal protein L3 [Azorhizobium caulinodans ORS 571] gi|158331067|dbj|BAF88552.1| ribosomal protein L3 [Azorhizobium caulinodans ORS 571] Length = 248 Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats. Identities = 133/219 (60%), Positives = 162/219 (73%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT ++ G +PVTVL +++CQVV HRTLDKNGY+AVQ+GAG+ K KN Sbjct: 8 MRSGVIAQKLGMTRIFTDAGEHLPVTVLKVESCQVVAHRTLDKNGYVAVQLGAGKRKPKN 67 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +K RG F+ V PK+KL EFRV D L+PVG+ + +F VGQ VDVTG TIGKGF Sbjct: 68 TNKAERGQFARAEVEPKRKLAEFRVDAD-ALIPVGAEITADHFVVGQYVDVTGTTIGKGF 126 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGGLRA+HGVSISHRS GSTG RQDPG+ FKNKKM G MG VT +NL+VV Sbjct: 127 AGGMKRHNFGGLRASHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGDVTVTTQNLKVV 186 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 D +RGLI V+G VPG WI+VRD+ K + + Sbjct: 187 MTDVERGLIAVEGAVPG-HAGGWIMVRDAVKKRLPSEAP 224 >gi|85713373|ref|ZP_01044382.1| Ribosomal protein L3 [Idiomarina baltica OS145] gi|85692801|gb|EAQ30790.1| Ribosomal protein L3 [Idiomarina baltica OS145] Length = 212 Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats. Identities = 95/213 (44%), Positives = 136/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V+ +G +PVTV+ + +V +T + +GY A+QV GE K Sbjct: 1 MAIGLVGRKVGMTRVFQEDGASVPVTVIEVLANRVTQVKTEETDGYRALQVTTGEKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP G F+ + + L+EFR++ + D VGS + F+ + VDVTG + GKG Sbjct: 61 VNKPSAGHFAKASSEAGRGLWEFRLEDGEGDDFAVGSEITVEVFSEIKKVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG+MG RVT ++LE+ Sbjct: 121 FAGTVKRWNFRTQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNERVTTQSLEL 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+L+KG VPGA ++V+ + K+ Sbjct: 181 VRVDAERNLLLIKGAVPGATGGD-VIVKPAVKA 212 >gi|218530394|ref|YP_002421210.1| 50S ribosomal protein L3 [Methylobacterium chloromethanicum CM4] gi|254803680|sp|B7L0R1|RL3_METC4 RecName: Full=50S ribosomal protein L3 gi|218522697|gb|ACK83282.1| ribosomal protein L3 [Methylobacterium chloromethanicum CM4] Length = 246 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 134/216 (62%), Positives = 160/216 (74%), Gaps = 2/216 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+ARK+GMT V+ G +PVTVL +D CQVV HRT +K+GY+A+QVG G+AKVKN Sbjct: 1 MRSGVIARKVGMTRVFTDAGEHVPVTVLQIDQCQVVAHRTTEKDGYVALQVGVGKAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS+ RG F+ V PKKKL EFRV +D L+PVG+ + +F GQ VDVTG + GKGF Sbjct: 61 VSQAERGRFAVAKVEPKKKLAEFRVSED-ALIPVGAEITADHFIPGQFVDVTGTSTGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G RVT +NL+VV Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLKVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D +RGLILV+G VPG WI VRDS K + Sbjct: 180 RTDPERGLILVEGAVPGVA-GGWIQVRDSVKRKLPA 214 >gi|300702780|ref|YP_003744381.1| 50S ribosomal protein L3 [Ralstonia solanacearum CFBP2957] gi|299070442|emb|CBJ41737.1| 50S ribosomal subunit protein L3 [Ralstonia solanacearum CFBP2957] Length = 220 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 93/213 (43%), Positives = 127/213 (59%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V+ +G IPVTVL + +V +T + +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + + EFR+ L +G F GQ +DV G TIGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEIIAEFRIDAAKAAELKLGDTIDVDLFAAGQKIDVQGTTIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG TV+NL + Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LVKG VPGA K+ +++V + K+ Sbjct: 181 VRVDAERKLLLVKGAVPGA-KSGFVVVSPAVKA 212 >gi|90020607|ref|YP_526434.1| 50S ribosomal protein L3 [Saccharophagus degradans 2-40] gi|109893552|sp|Q21M57|RL3_SACD2 RecName: Full=50S ribosomal protein L3 gi|89950207|gb|ABD80222.1| LSU ribosomal protein L3P [Saccharophagus degradans 2-40] Length = 214 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 97/215 (45%), Positives = 133/215 (61%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ +G +PVTV+ +D ++ ++++ +GY AVQV G + Sbjct: 1 MTIGIVGRKSGMTRIFTDDGLSVPVTVVEVDPNRITQVKSVETDGYAAVQVTVGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKP G F+ V + + E R + + VG + + F GQ VDVTG + GKGF Sbjct: 61 VSKPEAGHFAKAEVEAGRTVLELRNESG-EQFEVGGLLTVEAFEAGQKVDVTGASKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR+NF ATHG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLEVV Sbjct: 120 AGVIKRYNFRMQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAARVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 VD +R L+L+KG VPGA +++R + KS N Sbjct: 180 RVDVERNLLLIKGAVPGAPGGD-VIIRPAVKSRNN 213 >gi|83748149|ref|ZP_00945176.1| LSU ribosomal protein L3P [Ralstonia solanacearum UW551] gi|83725117|gb|EAP72268.1| LSU ribosomal protein L3P [Ralstonia solanacearum UW551] Length = 220 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 93/213 (43%), Positives = 128/213 (60%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V+ +G IPVTVL + +V +T + +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + + EFR+ L +G F+ GQ +DV G TIGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEIIAEFRIDAAKAAELKLGDTIDVDLFSAGQKIDVQGTTIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG TV+NL + Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LVKG VPGA K+ +++V + K+ Sbjct: 181 VRVDAERKLLLVKGAVPGA-KSGFVVVSPAVKA 212 >gi|154245623|ref|YP_001416581.1| 50S ribosomal protein L3 [Xanthobacter autotrophicus Py2] gi|226730590|sp|A7IFY1|RL3_XANP2 RecName: Full=50S ribosomal protein L3 gi|154159708|gb|ABS66924.1| ribosomal protein L3 [Xanthobacter autotrophicus Py2] Length = 241 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 132/219 (60%), Positives = 161/219 (73%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT ++ G +PVTVL +++CQVV HRTLDKNGY+AVQ+GAG K KN Sbjct: 1 MRSGVIAQKVGMTRIFTDAGEHVPVTVLKVESCQVVAHRTLDKNGYVAVQLGAGRRKPKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++ RG F+ V PK KL EFRV ++ L+PVG+ + +F VGQ VDVTG TIGKGF Sbjct: 61 VTRAERGHFAVAQVEPKHKLAEFRV-PEEALIPVGAEITADHFVVGQYVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G MG VT +NL+VV Sbjct: 120 AGGMKRHNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGDVTVTTQNLKVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 D +RGLI V+G VPG WI VRD+ K + + Sbjct: 180 MTDVERGLIAVEGAVPG-HAGGWITVRDAVKKKLPAEAP 217 >gi|298291438|ref|YP_003693377.1| 50S ribosomal protein L3 [Starkeya novella DSM 506] gi|296927949|gb|ADH88758.1| 50S ribosomal protein L3 [Starkeya novella DSM 506] Length = 251 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 129/219 (58%), Positives = 165/219 (75%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT ++N G +PVTVL +DNCQVV HRT++KNGY AVQ+G G+AK +N Sbjct: 1 MRSGVIAQKVGMTRIFNDAGEHVPVTVLKVDNCQVVAHRTVEKNGYTAVQLGVGQAKPQN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++ +RG F+ V PK+K+ EFRV++ DL+PVG+ + +F VGQ VDVTG +IGKGF Sbjct: 61 TTRALRGHFAVAKVEPKRKMAEFRVEE-SDLIPVGAELTVDHFVVGQFVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G VT +NL+VV Sbjct: 120 AGGMKRHNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGAETVTTQNLKVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 D +RGLI V+G VPG K WI+V D+ K + + Sbjct: 180 LTDVERGLIAVEGAVPG-NKGGWIIVADAVKKKLPAEAP 217 >gi|225627703|ref|ZP_03785740.1| 50S ribosomal protein L3 [Brucella ceti str. Cudo] gi|225617708|gb|EEH14753.1| 50S ribosomal protein L3 [Brucella ceti str. Cudo] Length = 245 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 138/219 (63%), Positives = 164/219 (74%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT VYN G +PVTVL ++NC VV RT++KNGY AVQ+G G AKVKN Sbjct: 9 MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 68 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ V PK KL EFRV D +LL VG + +F GQ VDVTG +IGKGF Sbjct: 69 TSKAMRGHFAKAEVEPKAKLAEFRVSPD-NLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 127 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 128 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 187 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 S D RGLILV+G VPG+ K +WILVRD+ K+++ Sbjct: 188 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASLPENAP 225 >gi|326390661|ref|ZP_08212216.1| 50S ribosomal protein L3 [Thermoanaerobacter ethanolicus JW 200] gi|325993339|gb|EGD51776.1| 50S ribosomal protein L3 [Thermoanaerobacter ethanolicus JW 200] Length = 210 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 97/212 (45%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +K GMT ++N +G IPVTV+ C VV +T++ +GY A+QVG G+ K K Sbjct: 1 MKKGILGKKHGMTQIFNEKGEVIPVTVIEAGPCVVVQKKTVETDGYNAIQVGFGDVKEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+ G F V V K+ L EF++ D VGS F G VDVTG++ GKGF Sbjct: 61 LTKPLIGHFKKVGVPFKRYLREFKLD-DISGYEVGSEIKVDIFKPGDRVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR+ +HG S HR GS G DPGR FK K M G MG RVT++NLEVV Sbjct: 120 AGVVKRYGANRGPMSHG-SKYHRRVGSMGATTDPGRTFKGKIMPGHMGHERVTIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + L+LVKG VPG K S ++++DS KS Sbjct: 179 KVDPELNLLLVKGSVPGP-KGSLLIIKDSVKS 209 >gi|317123097|ref|YP_004103100.1| 50S ribosomal protein L3P [Thermaerobacter marianensis DSM 12885] gi|315593077|gb|ADU52373.1| LSU ribosomal protein L3P [Thermaerobacter marianensis DSM 12885] Length = 217 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 102/210 (48%), Positives = 133/210 (63%), Gaps = 3/210 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RKLGMT +++ EGR +PVTV+ C VV RT +++GY AVQ+G GE K Sbjct: 1 MGVGLLGRKLGMTQIFDDEGRAVPVTVIQAGPCVVVQTRTEERDGYRAVQLGFGEVKPSK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP-VGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KPM G F V+P K L EFR++ DD+ LP VG + F G+ VDVTG + GKG Sbjct: 61 VNKPMAGHFRKAGVAPVKVLREFRLEGDDEPLPEVGQQLTVELFKAGEYVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G + RH FG +HG S HR GS G P RVFK ++MAGR G RVTV+ L+V Sbjct: 121 FLGPIARHGFGRGPMSHG-SKYHRGPGSLGPSTYPARVFKGRRMAGRTGAERVTVRGLQV 179 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 V VD +R L+LVKG VPG + S + +R + Sbjct: 180 VRVDPERNLLLVKGAVPGP-RGSVVAIRKT 208 >gi|163851585|ref|YP_001639628.1| 50S ribosomal protein L3 [Methylobacterium extorquens PA1] gi|240138753|ref|YP_002963225.1| 50S ribosomal subunit protein L3 [Methylobacterium extorquens AM1] gi|254561353|ref|YP_003068448.1| 50S ribosomal subunit protein L3 [Methylobacterium extorquens DM4] gi|226730532|sp|A9W4Q1|RL3_METEP RecName: Full=50S ribosomal protein L3 gi|163663190|gb|ABY30557.1| ribosomal protein L3 [Methylobacterium extorquens PA1] gi|240008722|gb|ACS39948.1| 50S ribosomal subunit protein L3 [Methylobacterium extorquens AM1] gi|254268631|emb|CAX24590.1| 50S ribosomal subunit protein L3 [Methylobacterium extorquens DM4] Length = 246 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 134/216 (62%), Positives = 160/216 (74%), Gaps = 2/216 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+ARK+GMT V+ G +PVTVL +D CQVV HRT +K+GY+A+QVG G+AKVKN Sbjct: 1 MRSGVIARKVGMTRVFTDAGEHVPVTVLQIDQCQVVAHRTTEKDGYVALQVGVGKAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS+ RG F+ V PKKKL EFRV +D L+PVG+ + +F GQ VDVTG + GKGF Sbjct: 61 VSQAERGRFAVAKVEPKKKLAEFRVSED-ALIPVGAEITADHFIPGQFVDVTGTSTGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G RVT +NL+VV Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLKVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D +RGLILV+G VPG WI VRDS K + Sbjct: 180 RTDPERGLILVEGAVPGVA-GGWIQVRDSVKRKLPA 214 >gi|163868650|ref|YP_001609859.1| 50S ribosomal protein L3 [Bartonella tribocorum CIP 105476] gi|189042832|sp|A9IW27|RL3_BART1 RecName: Full=50S ribosomal protein L3 gi|161018306|emb|CAK01864.1| 50S ribosomal protein L3 [Bartonella tribocorum CIP 105476] Length = 245 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 133/219 (60%), Positives = 164/219 (74%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT +YN G +PVTVL L+NCQVV RT++KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLENCQVVAQRTVEKNGYTAVQLGVGFAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ +RG F+ +V PK K+ EFRV D +LL +G+ + +F GQ VDVTG +IGKGF Sbjct: 61 TSQALRGHFAKASVEPKAKIAEFRVSPD-NLLDIGTEITVEHFVPGQRVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNIEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 S D +RGLILV+G V G+ K SWILVRD+ K + Sbjct: 180 STDIERGLILVRGAVSGS-KGSWILVRDAVKKPLPDNAP 217 >gi|167748430|ref|ZP_02420557.1| hypothetical protein ANACAC_03174 [Anaerostipes caccae DSM 14662] gi|317472037|ref|ZP_07931369.1| 50S ribosomal protein L3 [Anaerostipes sp. 3_2_56FAA] gi|167652422|gb|EDR96551.1| hypothetical protein ANACAC_03174 [Anaerostipes caccae DSM 14662] gi|316900441|gb|EFV22423.1| 50S ribosomal protein L3 [Anaerostipes sp. 3_2_56FAA] Length = 209 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 127/212 (59%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ K+GMT ++N +G PVTVL C V +T + +GY AVQVG + K K+ Sbjct: 1 MKKAILTTKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTEENDGYEAVQVGFADKKEKS 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G F V+PKK + EF+ + + VG F G +D T + GKG+ Sbjct: 61 VNKPEKGHFDKAGVAPKKFVREFKFENASE-YTVGQEIKADIFEAGDKIDATATSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH THG S HR GS G DP +VFK KKM G+MG RVT++NLEVV Sbjct: 120 AGGIKRHGLSTGPKTHG-SKYHRHAGSNGMASDPSKVFKGKKMPGQMGSERVTIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + +ILVKG VPG KK S +++++S K+ Sbjct: 179 KVDAENNIILVKGAVPGPKK-SLVMLKESVKA 209 >gi|237815652|ref|ZP_04594649.1| 50S ribosomal protein L3 [Brucella abortus str. 2308 A] gi|17982696|gb|AAL51938.1| lsu ribosomal protein l3p [Brucella melitensis bv. 1 str. 16M] gi|237788950|gb|EEP63161.1| 50S ribosomal protein L3 [Brucella abortus str. 2308 A] Length = 245 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 138/219 (63%), Positives = 164/219 (74%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT VYN G +PVTVL ++NC VV RT++KNGY AVQ+G G AKVKN Sbjct: 9 MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 68 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ V PK KL EFRV D +LL VG + +F GQ VDVTG +IGKGF Sbjct: 69 TSKAMRGHFAKAEVEPKAKLAEFRVSPD-NLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 127 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 128 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 187 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 S D RGLILV+G VPG+ K +WILVRD+ K+++ Sbjct: 188 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASLPENAP 225 >gi|154253177|ref|YP_001414001.1| 50S ribosomal protein L3 [Parvibaculum lavamentivorans DS-1] gi|171769627|sp|A7HWR1|RL3_PARL1 RecName: Full=50S ribosomal protein L3 gi|154157127|gb|ABS64344.1| ribosomal protein L3 [Parvibaculum lavamentivorans DS-1] Length = 251 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 132/215 (61%), Positives = 161/215 (74%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+ +K+GMT ++ +GR +PVTVL LDNCQVV RT +KNGY AVQ+G G AK KN Sbjct: 1 MRSGVIVKKVGMTRLFMEDGRHVPVTVLKLDNCQVVSQRTDEKNGYTAVQLGTGRAKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ RG F+ +V PK +L EFRV D +LL VG + +F GQ VDV+G +IGKGF Sbjct: 61 VANAQRGQFARASVEPKLELVEFRVSPD-NLLDVGVEITADHFIAGQYVDVSGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGGLRATHGVS+SHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 120 AGVMKRHNFGGLRATHGVSVSHRSHGSTGQNQDPGKVFKGKKMAGHMGATRVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D +GLI+VKG VPG+ K W+LVRD+ K+ + Sbjct: 180 RTDADKGLIMVKGAVPGS-KGGWVLVRDAVKTKLP 213 >gi|302382618|ref|YP_003818441.1| 50S ribosomal protein L3 [Brevundimonas subvibrioides ATCC 15264] gi|302193246|gb|ADL00818.1| 50S ribosomal protein L3 [Brevundimonas subvibrioides ATCC 15264] Length = 250 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 123/212 (58%), Positives = 157/212 (74%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+KLGMT V+ +G+ +PVTVL LD+CQVV RT +++GY+A+Q+GAG K KN Sbjct: 1 MRTGVIAKKLGMTRVFADDGQHVPVTVLQLDDCQVVGQRTQERDGYVALQLGAGTKKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +K R F++ V PK + EFRV DD ++ VG+ S +F VGQ VD+ G TIGKGF Sbjct: 61 TNKAQRTTFATAEVEPKHVVMEFRVT-DDAMIDVGATLSADHFVVGQKVDIQGETIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FK KKMAG++G +T +NL +V Sbjct: 120 QGGMKRWNFGGLRATHGVSVSHRSLGSTGQRQDPGKTFKGKKMAGQLGNETITTQNLTIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +RGLILVKG VPG + SW+ VRD+ K Sbjct: 180 RVDAERGLILVKGAVPG-HEGSWVKVRDAHKK 210 >gi|188581375|ref|YP_001924820.1| 50S ribosomal protein L3 [Methylobacterium populi BJ001] gi|226730534|sp|B1ZLK4|RL3_METPB RecName: Full=50S ribosomal protein L3 gi|179344873|gb|ACB80285.1| ribosomal protein L3 [Methylobacterium populi BJ001] Length = 246 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 135/216 (62%), Positives = 160/216 (74%), Gaps = 2/216 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+ARK+GMT V+ G +PVTVL +D CQVV HRT +K+GY+A+QVG G+AKVKN Sbjct: 1 MRSGVIARKVGMTRVFTDAGEHVPVTVLQIDQCQVVAHRTTEKDGYVALQVGVGKAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS+ RG F+ V PKKKL EFRV +D L+PVG+ + +F GQ VDVTG T GKGF Sbjct: 61 VSQAERGRFAVAKVEPKKKLAEFRVSED-ALIPVGAEITADHFIPGQFVDVTGTTTGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G RVT +NL+VV Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLKVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D +RGLILV+G VPG WI VRDS K + Sbjct: 180 RTDPERGLILVEGAVPGVA-GGWIQVRDSVKRKLPA 214 >gi|307267014|ref|ZP_07548530.1| 50S ribosomal protein L3 [Thermoanaerobacter wiegelii Rt8.B1] gi|306917999|gb|EFN48257.1| 50S ribosomal protein L3 [Thermoanaerobacter wiegelii Rt8.B1] Length = 210 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 97/212 (45%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +K GMT ++N +G IPVTV+ C VV +T++ +GY A+QVG G+ K K Sbjct: 1 MKKGILGKKHGMTQIFNEKGEVIPVTVIEAGPCVVVQKKTVETDGYNAIQVGFGDVKEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+ G F V V K+ L EF++ D + VGS F G VDVTG++ GKGF Sbjct: 61 LTKPLIGHFKKVGVPFKRYLREFKLD-DINGYEVGSEIKVDIFKPGDRVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR+ +HG S HR GS G DPGR FK K M G MG RVT++NLEVV Sbjct: 120 AGVVKRYGANRGPMSHG-SKYHRRVGSMGATTDPGRTFKGKIMPGHMGHERVTIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + L+LVKG VPG K S ++++DS KS Sbjct: 179 KVDPELNLLLVKGSVPGP-KGSLLIIKDSVKS 209 >gi|254785079|ref|YP_003072507.1| 50S ribosomal protein L3 [Teredinibacter turnerae T7901] gi|259709742|sp|C5BQ61|RL3_TERTT RecName: Full=50S ribosomal protein L3 gi|237683501|gb|ACR10765.1| ribosomal protein L3 [Teredinibacter turnerae T7901] Length = 214 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 90/211 (42%), Positives = 126/211 (59%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ +G +PVTV+ +D ++ ++++ +GY AVQV G + Sbjct: 1 MTIGIVGRKSGMTRIFTDDGLSVPVTVIEVDPNRITQVKSVETDGYAAVQVTVGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ + ++E R + + VG + F GQ VDVTG + GKGF Sbjct: 61 VTKAEAGHFAKAQTEAGRGVWELR-NEAGEAFEVGGQLTVEAFEAGQKVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF ATHG S+SHR+ GS G Q PGRV K KKM+G MG RVT +NLEVV Sbjct: 120 AGTVKRWNFRTQDATHGNSLSHRAPGSIGQCQTPGRVMKGKKMSGHMGAERVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L+L+KG VPGA + +R + K Sbjct: 180 RVDVERNLLLIKGAVPGAPGGD-VFIRPAVK 209 >gi|237806875|ref|YP_002891315.1| 50S ribosomal protein L3 [Tolumonas auensis DSM 9187] gi|259709745|sp|C4L7T0|RL3_TOLAT RecName: Full=50S ribosomal protein L3 gi|237499136|gb|ACQ91729.1| ribosomal protein L3 [Tolumonas auensis DSM 9187] Length = 212 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 95/213 (44%), Positives = 131/213 (61%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RKLGMT V+ +G IPVTV+ ++ +V +TL+ +GY AVQV G K Sbjct: 1 MTLGLVGRKLGMTRVFTEDGVSIPVTVIEVEANRVTQLKTLETDGYTAVQVTTGVKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++K G F+ V + L+EFR+ + L VGS F + DVTG++ GKG Sbjct: 61 LTKAEAGHFAKAEVEAGRGLWEFRLNDGEGADLTVGSELKVDIFADVKKADVTGISKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KR NF THG S SHR GS G Q PG+VFK KKMAG +G RVTV++L++ Sbjct: 121 FAGVVKRWNFRTQDMTHGNSRSHRVPGSIGQNQSPGKVFKGKKMAGHLGCERVTVQSLDI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+L+KG VPGA N ++V+ + K+ Sbjct: 181 VRVDVERNLLLIKGAVPGA-TNGDVIVKPAVKA 212 >gi|90417763|ref|ZP_01225675.1| ribosomal protein L3 [Aurantimonas manganoxydans SI85-9A1] gi|90337435|gb|EAS51086.1| ribosomal protein L3 [Aurantimonas manganoxydans SI85-9A1] Length = 241 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 140/219 (63%), Positives = 173/219 (78%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G +PVTVL ++N QVV RT +KNGY AVQVGAG AKVKN Sbjct: 1 MRSGVIAQKVGMTRVYNDVGEHVPVTVLKVENLQVVAQRTKEKNGYTAVQVGAGLAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SKPMRG F+ +V PK+KL EFRV DD+++ VG+ + +F GQ+VDVTG +IGKGF Sbjct: 61 TSKPMRGVFAQASVEPKRKLVEFRVS-DDNMIDVGAEITAEHFVPGQMVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG RVT +NL+VV Sbjct: 120 AGAMKRHNFGGLRATHGVSVSHRSHGSTGQRQDPGKVFKNKKMAGHMGDVRVTTQNLQVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 +D ++GLILV+G VPG+ K WI +RD+ K+++ Sbjct: 180 RIDPEKGLILVRGAVPGS-KGGWIEIRDAVKASLPDNAP 217 >gi|223041817|ref|ZP_03612007.1| 50S ribosomal protein L3 [Actinobacillus minor 202] gi|240947884|ref|ZP_04752324.1| 50S ribosomal protein L3 [Actinobacillus minor NM305] gi|223017386|gb|EEF15807.1| 50S ribosomal protein L3 [Actinobacillus minor 202] gi|240297846|gb|EER48282.1| 50S ribosomal protein L3 [Actinobacillus minor NM305] Length = 210 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 98/210 (46%), Positives = 132/210 (62%), Gaps = 1/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV G K V+ Sbjct: 2 IGLIGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDGYSAIQVTTGTKKASRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V + L+EFR + + +G + FT + VDVTG + GKGF G Sbjct: 62 KPEAGHFVKAGVEAGRGLWEFRTEGETQEFTLGQEINVDIFTDVKKVDVTGTSKGKGFQG 121 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV V Sbjct: 122 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 181 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA NS ++V+ + K+ Sbjct: 182 DAERKLLLVKGAVPGA-TNSDVIVKPAVKA 210 >gi|240850835|ref|YP_002972235.1| 50S ribosomal protein L3 [Bartonella grahamii as4aup] gi|240267958|gb|ACS51546.1| 50S ribosomal protein L3 [Bartonella grahamii as4aup] Length = 245 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 133/219 (60%), Positives = 164/219 (74%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT +YN G +PVTVL L+NCQVV RT++KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLENCQVVAQRTVEKNGYTAVQLGVGFAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ +RG F+ +V PK K+ EFRV D +LL VG+ + +F GQ VDVTG +IGKGF Sbjct: 61 TSQALRGHFAKASVEPKAKIAEFRVSPD-NLLDVGTEITVEHFVPGQRVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EV+ Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNIEVI 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 S D +RGLILV+G V G+ K SWILVRD+ K + Sbjct: 180 STDSERGLILVRGAVSGS-KGSWILVRDAVKKRLPDNAP 217 >gi|148560391|ref|YP_001259153.1| 50S ribosomal protein L3 [Brucella ovis ATCC 25840] gi|161619189|ref|YP_001593076.1| 50S ribosomal protein L3 [Brucella canis ATCC 23365] gi|163843499|ref|YP_001627903.1| 50S ribosomal protein L3 [Brucella suis ATCC 23445] gi|254701974|ref|ZP_05163802.1| 50S ribosomal protein L3 [Brucella suis bv. 5 str. 513] gi|254704518|ref|ZP_05166346.1| 50S ribosomal protein L3 [Brucella suis bv. 3 str. 686] gi|254706586|ref|ZP_05168414.1| 50S ribosomal protein L3 [Brucella pinnipedialis M163/99/10] gi|254710304|ref|ZP_05172115.1| 50S ribosomal protein L3 [Brucella pinnipedialis B2/94] gi|254719291|ref|ZP_05181102.1| 50S ribosomal protein L3 [Brucella sp. 83/13] gi|256031798|ref|ZP_05445412.1| 50S ribosomal protein L3 [Brucella pinnipedialis M292/94/1] gi|256061313|ref|ZP_05451463.1| 50S ribosomal protein L3 [Brucella neotomae 5K33] gi|256369657|ref|YP_003107167.1| 50S ribosomal protein L3 [Brucella microti CCM 4915] gi|260168932|ref|ZP_05755743.1| 50S ribosomal protein L3 [Brucella sp. F5/99] gi|260566238|ref|ZP_05836708.1| ribosomal protein L3 [Brucella suis bv. 4 str. 40] gi|261314046|ref|ZP_05953243.1| 50S ribosomal protein L3 [Brucella pinnipedialis M163/99/10] gi|261317867|ref|ZP_05957064.1| 50S ribosomal protein L3 [Brucella pinnipedialis B2/94] gi|261325320|ref|ZP_05964517.1| 50S ribosomal protein L3 [Brucella neotomae 5K33] gi|261752542|ref|ZP_05996251.1| 50S ribosomal protein L3 [Brucella suis bv. 5 str. 513] gi|261755201|ref|ZP_05998910.1| 50S ribosomal protein L3 [Brucella suis bv. 3 str. 686] gi|261758425|ref|ZP_06002134.1| ribosomal protein L3 [Brucella sp. F5/99] gi|265984291|ref|ZP_06097026.1| 50S ribosomal protein L3 [Brucella sp. 83/13] gi|265988896|ref|ZP_06101453.1| 50S ribosomal protein L3 [Brucella pinnipedialis M292/94/1] gi|294852570|ref|ZP_06793243.1| 50S ribosomal protein L3 [Brucella sp. NVSL 07-0026] gi|306838043|ref|ZP_07470901.1| 50S ribosomal protein L3 [Brucella sp. NF 2653] gi|306840301|ref|ZP_07473073.1| 50S ribosomal protein L3 [Brucella sp. BO2] gi|306844137|ref|ZP_07476731.1| 50S ribosomal protein L3 [Brucella sp. BO1] gi|166233122|sp|A5VR06|RL3_BRUO2 RecName: Full=50S ribosomal protein L3 gi|189042833|sp|A9M5Q0|RL3_BRUC2 RecName: Full=50S ribosomal protein L3 gi|189042834|sp|B0CH32|RL3_BRUSI RecName: Full=50S ribosomal protein L3 gi|148371648|gb|ABQ61627.1| ribosomal protein L3 [Brucella ovis ATCC 25840] gi|161336000|gb|ABX62305.1| 50S ribosomal protein L3 [Brucella canis ATCC 23365] gi|163674222|gb|ABY38333.1| 50S ribosomal protein L3 [Brucella suis ATCC 23445] gi|255999819|gb|ACU48218.1| 50S ribosomal protein L3 [Brucella microti CCM 4915] gi|260155756|gb|EEW90836.1| ribosomal protein L3 [Brucella suis bv. 4 str. 40] gi|261297090|gb|EEY00587.1| 50S ribosomal protein L3 [Brucella pinnipedialis B2/94] gi|261301300|gb|EEY04797.1| 50S ribosomal protein L3 [Brucella neotomae 5K33] gi|261303072|gb|EEY06569.1| 50S ribosomal protein L3 [Brucella pinnipedialis M163/99/10] gi|261738409|gb|EEY26405.1| ribosomal protein L3 [Brucella sp. F5/99] gi|261742295|gb|EEY30221.1| 50S ribosomal protein L3 [Brucella suis bv. 5 str. 513] gi|261744954|gb|EEY32880.1| 50S ribosomal protein L3 [Brucella suis bv. 3 str. 686] gi|264661093|gb|EEZ31354.1| 50S ribosomal protein L3 [Brucella pinnipedialis M292/94/1] gi|264662883|gb|EEZ33144.1| 50S ribosomal protein L3 [Brucella sp. 83/13] gi|294821159|gb|EFG38158.1| 50S ribosomal protein L3 [Brucella sp. NVSL 07-0026] gi|306275580|gb|EFM57312.1| 50S ribosomal protein L3 [Brucella sp. BO1] gi|306289700|gb|EFM60889.1| 50S ribosomal protein L3 [Brucella sp. BO2] gi|306406967|gb|EFM63188.1| 50S ribosomal protein L3 [Brucella sp. NF 2653] Length = 237 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 138/219 (63%), Positives = 164/219 (74%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT VYN G +PVTVL ++NC VV RT++KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ V PK KL EFRV D +LL VG + +F GQ VDVTG +IGKGF Sbjct: 61 TSKAMRGHFAKAEVEPKAKLAEFRVSPD-NLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 S D RGLILV+G VPG+ K +WILVRD+ K+++ Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASLPENAP 217 >gi|56461024|ref|YP_156305.1| ribosomal protein L3 [Idiomarina loihiensis L2TR] gi|81821713|sp|Q5QXZ0|RL3_IDILO RecName: Full=50S ribosomal protein L3 gi|56180034|gb|AAV82756.1| Ribosomal protein L3 [Idiomarina loihiensis L2TR] Length = 212 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 95/213 (44%), Positives = 134/213 (62%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V+ +G +PVTV+ + +V ++ D +GY A+QV GE K Sbjct: 1 MAIGLVGRKVGMTRVFQEDGASVPVTVIEVLANRVTQVKSDDTDGYRALQVTTGEKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G F+ + L+EFR+Q + VGS + F VDVTG + GKG Sbjct: 61 VTKPLAGHFAKAGTEAGRGLWEFRLQNGEGEDYAVGSELTVDIFAEVNKVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG+MG +VT ++LE+ Sbjct: 121 FAGTVKRWNFSMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNEQVTTQSLEL 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+L+KG VPGA S ++V+ + K+ Sbjct: 181 VRVDAERSLLLIKGAVPGA-TGSDVIVKPAVKA 212 >gi|310817008|ref|YP_003964972.1| 50S ribosomal protein L3 [Ketogulonicigenium vulgare Y25] gi|308755743|gb|ADO43672.1| 50S ribosomal protein L3 [Ketogulonicigenium vulgare Y25] Length = 237 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 121/212 (57%), Positives = 162/212 (76%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSG +A+K+GMT ++ +GR++PVTVL +N QVV RT++K+GY AVQ+GAG AK KN Sbjct: 4 LRSGTIAKKIGMTRLFLEDGRQVPVTVLQFENLQVVAQRTVEKDGYTAVQLGAGTAKAKN 63 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++PMRG F++ V PK+KL EFRV + +L+PVG+ ++ GQ VD++G +IGKGF Sbjct: 64 VTQPMRGHFAAAKVEPKRKLAEFRVTPE-NLIPVGAEIIADHYVAGQFVDISGTSIGKGF 122 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGGLRA+HGVS+SHRSHGS G QDPGR+FK KKMAG MG RVT +NL+V+ Sbjct: 123 AGVMKRHNFGGLRASHGVSVSHRSHGSVGQCQDPGRIFKGKKMAGHMGSARVTTQNLQVI 182 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D RGL++VKG VPG K W+ ++D+ K Sbjct: 183 RTDSTRGLVMVKGAVPG-NKGGWVTIKDAVKK 213 >gi|295688906|ref|YP_003592599.1| 50S ribosomal protein L3 [Caulobacter segnis ATCC 21756] gi|295430809|gb|ADG09981.1| 50S ribosomal protein L3 [Caulobacter segnis ATCC 21756] Length = 254 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 121/218 (55%), Positives = 157/218 (72%), Gaps = 2/218 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GV+A+KLGMT ++ G+ +PVTVL LD CQV RT++K+GY A+Q+GAG K KN Sbjct: 7 RTGVLAKKLGMTRFFDEAGQHVPVTVLSLDGCQVTGVRTVEKDGYTALQLGAGAKKAKNT 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SK +RG F+ V PK+ + EFRV+++ L+ VG+ + +F GQ VD+ G+T+GKGF+ Sbjct: 67 SKALRGHFAKAAVEPKRVVAEFRVEEN-ALIEVGAELTADHFVAGQKVDIQGVTVGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F KKMAG +G VT N+ V Sbjct: 126 GAMKRWNFGGLRATHGVSVSHRSHGSTGNRQDPGRTFPGKKMAGHLGQETVTTLNVTVWK 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 VD +RGLILVKG VPG + S++ VRD+ K A+ Sbjct: 186 VDVERGLILVKGAVPG-HEGSYVKVRDAVKKALPADAP 222 >gi|183600753|ref|ZP_02962246.1| hypothetical protein PROSTU_04347 [Providencia stuartii ATCC 25827] gi|188019731|gb|EDU57771.1| hypothetical protein PROSTU_04347 [Providencia stuartii ATCC 25827] Length = 209 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 96/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++N +V +T + +GY A+QV G K VS Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKTAETDGYNAIQVTTGSKKANRVS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L EFR ++ + VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRILREFRTEEGAEF-NVGQSISVEIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|225027478|ref|ZP_03716670.1| hypothetical protein EUBHAL_01734 [Eubacterium hallii DSM 3353] gi|224955213|gb|EEG36422.1| hypothetical protein EUBHAL_01734 [Eubacterium hallii DSM 3353] Length = 209 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 88/212 (41%), Positives = 128/212 (60%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++ +G IPVTVL C+V +T++ +GY AVQVG + + K Sbjct: 1 MKKAILATKIGMTQIFAEDGELIPVTVLQAGPCEVTQVKTVENDGYSAVQVGFQDMREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KPM+G F VS K+ + EF++ D + +G + F G VD T ++ GKGF Sbjct: 61 STKPMKGHFEKAGVSVKRFVREFKLD-DAENYELGQKITVDVFEAGDKVDATAISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH THG S HR GS G DP +V K KKM G+MG ++T++NLEVV Sbjct: 120 QGAIKRHGQHTGPKTHG-SKYHRHAGSNGMASDPSKVMKGKKMPGQMGHVQITIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D + +ILVKG VPG KK S + ++ + K+ Sbjct: 179 KIDAENNVILVKGSVPGPKK-SLVTLKAAVKA 209 >gi|62290144|ref|YP_221937.1| 50S ribosomal protein L3 [Brucella abortus bv. 1 str. 9-941] gi|82700067|ref|YP_414641.1| 50S ribosomal protein L3 [Brucella melitensis biovar Abortus 2308] gi|161511150|ref|NP_539674.2| 50S ribosomal protein L3 [Brucella melitensis bv. 1 str. 16M] gi|189024382|ref|YP_001935150.1| Ribosomal protein L3 [Brucella abortus S19] gi|225852730|ref|YP_002732963.1| 50S ribosomal protein L3 [Brucella melitensis ATCC 23457] gi|254689453|ref|ZP_05152707.1| 50S ribosomal protein L3 [Brucella abortus bv. 6 str. 870] gi|254693938|ref|ZP_05155766.1| 50S ribosomal protein L3 [Brucella abortus bv. 3 str. Tulya] gi|254697588|ref|ZP_05159416.1| 50S ribosomal protein L3 [Brucella abortus bv. 2 str. 86/8/59] gi|254730482|ref|ZP_05189060.1| 50S ribosomal protein L3 [Brucella abortus bv. 4 str. 292] gi|256044883|ref|ZP_05447787.1| 50S ribosomal protein L3 [Brucella melitensis bv. 1 str. Rev.1] gi|256113787|ref|ZP_05454591.1| 50S ribosomal protein L3 [Brucella melitensis bv. 3 str. Ether] gi|256257699|ref|ZP_05463235.1| 50S ribosomal protein L3 [Brucella abortus bv. 9 str. C68] gi|256263780|ref|ZP_05466312.1| ribosomal protein L3 [Brucella melitensis bv. 2 str. 63/9] gi|260546692|ref|ZP_05822431.1| ribosomal protein L3 [Brucella abortus NCTC 8038] gi|260565515|ref|ZP_05835999.1| ribosomal protein L3 [Brucella melitensis bv. 1 str. 16M] gi|260754976|ref|ZP_05867324.1| 50S ribosomal protein L3 [Brucella abortus bv. 6 str. 870] gi|260758192|ref|ZP_05870540.1| 50S ribosomal protein L3 [Brucella abortus bv. 4 str. 292] gi|260762018|ref|ZP_05874361.1| 50S ribosomal protein L3 [Brucella abortus bv. 2 str. 86/8/59] gi|260883985|ref|ZP_05895599.1| 50S ribosomal protein L3 [Brucella abortus bv. 9 str. C68] gi|261214230|ref|ZP_05928511.1| 50S ribosomal protein L3 [Brucella abortus bv. 3 str. Tulya] gi|265991310|ref|ZP_06103867.1| 50S ribosomal protein L3 [Brucella melitensis bv. 1 str. Rev.1] gi|265995147|ref|ZP_06107704.1| 50S ribosomal protein L3 [Brucella melitensis bv. 3 str. Ether] gi|297248539|ref|ZP_06932257.1| 50S ribosomal protein L3 [Brucella abortus bv. 5 str. B3196] gi|42559669|sp|Q8YHP0|RL3_BRUME RecName: Full=50S ribosomal protein L3 gi|81309408|sp|Q57CQ8|RL3_BRUAB RecName: Full=50S ribosomal protein L3 gi|109893414|sp|Q2YM03|RL3_BRUA2 RecName: Full=50S ribosomal protein L3 gi|226725140|sp|B2S679|RL3_BRUA1 RecName: Full=50S ribosomal protein L3 gi|254803659|sp|C0RJK1|RL3_BRUMB RecName: Full=50S ribosomal protein L3 gi|62196276|gb|AAX74576.1| RplC, ribosomal protein L3 [Brucella abortus bv. 1 str. 9-941] gi|82616168|emb|CAJ11211.1| Ribosomal protein L3 [Brucella melitensis biovar Abortus 2308] gi|189019954|gb|ACD72676.1| Ribosomal protein L3 [Brucella abortus S19] gi|225641095|gb|ACO01009.1| 50S ribosomal protein L3 [Brucella melitensis ATCC 23457] gi|260095742|gb|EEW79619.1| ribosomal protein L3 [Brucella abortus NCTC 8038] gi|260151583|gb|EEW86677.1| ribosomal protein L3 [Brucella melitensis bv. 1 str. 16M] gi|260668510|gb|EEX55450.1| 50S ribosomal protein L3 [Brucella abortus bv. 4 str. 292] gi|260672450|gb|EEX59271.1| 50S ribosomal protein L3 [Brucella abortus bv. 2 str. 86/8/59] gi|260675084|gb|EEX61905.1| 50S ribosomal protein L3 [Brucella abortus bv. 6 str. 870] gi|260873513|gb|EEX80582.1| 50S ribosomal protein L3 [Brucella abortus bv. 9 str. C68] gi|260915837|gb|EEX82698.1| 50S ribosomal protein L3 [Brucella abortus bv. 3 str. Tulya] gi|262766260|gb|EEZ12049.1| 50S ribosomal protein L3 [Brucella melitensis bv. 3 str. Ether] gi|263002094|gb|EEZ14669.1| 50S ribosomal protein L3 [Brucella melitensis bv. 1 str. Rev.1] gi|263093908|gb|EEZ17842.1| ribosomal protein L3 [Brucella melitensis bv. 2 str. 63/9] gi|297175708|gb|EFH35055.1| 50S ribosomal protein L3 [Brucella abortus bv. 5 str. B3196] gi|326409255|gb|ADZ66320.1| Ribosomal protein L3 [Brucella melitensis M28] gi|326538963|gb|ADZ87178.1| 50S ribosomal protein L3 [Brucella melitensis M5-90] Length = 237 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 138/219 (63%), Positives = 164/219 (74%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT VYN G +PVTVL ++NC VV RT++KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ V PK KL EFRV D +LL VG + +F GQ VDVTG +IGKGF Sbjct: 61 TSKAMRGHFAKAEVEPKAKLAEFRVSPD-NLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 S D RGLILV+G VPG+ K +WILVRD+ K+++ Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASLPENAP 217 >gi|268593541|ref|ZP_06127762.1| 50S ribosomal protein L3 [Providencia rettgeri DSM 1131] gi|291310819|gb|EFE51272.1| 50S ribosomal protein L3 [Providencia rettgeri DSM 1131] Length = 209 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 96/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++N +V +T + +GY A+QV G K V+ Sbjct: 2 KGLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKTAETDGYNAIQVTTGSKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L EFR+ +D VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRILREFRI-EDSAEYTVGQSISVEIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSNLIVKPAVKA 209 >gi|126732274|ref|ZP_01748074.1| ribosomal protein L3 [Sagittula stellata E-37] gi|126707143|gb|EBA06209.1| ribosomal protein L3 [Sagittula stellata E-37] Length = 279 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 126/215 (58%), Positives = 158/215 (73%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ +G++IPVTVL LDN QVV RT + NGY AV +G G AK K Sbjct: 1 MRSGVIAKKIGMTRVFMEDGKQIPVTVLQLDNLQVVAQRTDETNGYSAVALGCGTAKAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ MR FS+ V PK+K+ EFRV + +L+ VG ++ GQ VDV+G+TIGKGF Sbjct: 61 TSQAMRKVFSNAGVEPKRKIVEFRVAPE-NLIEVGEEIIADHYFEGQFVDVSGITIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGGLRATHGVSISHRSHGSTG Q+PG+VFK KKMAG MG RVT +NL+VV Sbjct: 120 AGGMKRHNFGGLRATHGVSISHRSHGSTGQCQNPGKVFKGKKMAGHMGSVRVTTQNLQVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D RG+I++KG VPG K SW+ ++D+ K V Sbjct: 180 RTDSDRGVIMIKGAVPGP-KGSWVTIKDAVKKPVP 213 >gi|153952861|ref|YP_001393626.1| 50S ribosomal protein L3 [Clostridium kluyveri DSM 555] gi|219853526|ref|YP_002470648.1| hypothetical protein CKR_0183 [Clostridium kluyveri NBRC 12016] gi|189042838|sp|A5N4P7|RL3_CLOK5 RecName: Full=50S ribosomal protein L3 gi|254803666|sp|B9DYA9|RL3_CLOK1 RecName: Full=50S ribosomal protein L3 gi|146345742|gb|EDK32278.1| RplC [Clostridium kluyveri DSM 555] gi|219567250|dbj|BAH05234.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 209 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 89/212 (41%), Positives = 130/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +KLGMT ++N GR IPVTV+ C VV +T +K+GY ++Q+G G+ + K Sbjct: 1 MKKAILGKKLGMTQIFNENGRVIPVTVIEAGPCVVVQKKTEEKDGYKSIQIGFGDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F+ VS K+ L EF+V D+ VG F G +DV+G++ GKGF Sbjct: 61 VNKPLKGHFAKSGVSLKRFLKEFKVDNIDE-YEVGQEIKADIFAEGDRIDVSGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G ++R N +HG S HR+ GS G DP R FKNKKM G MG TV NL+V Sbjct: 120 QGVIRRWNAQRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKKMPGHMGNKNTTVLNLQVA 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ +IL+KG VPG K S++ ++D+ K+ Sbjct: 179 KVIPEKNIILIKGGVPGPNK-SFVSIKDTVKA 209 >gi|259047555|ref|ZP_05737956.1| 50S ribosomal protein L3 [Granulicatella adiacens ATCC 49175] gi|259035746|gb|EEW37001.1| 50S ribosomal protein L3 [Granulicatella adiacens ATCC 49175] Length = 210 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 85/212 (40%), Positives = 126/212 (59%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT + G IPVTV+ + V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGKKVGMTQYFTEAGELIPVTVVEVTPNVVLQLKTIENDGYEAVQLGFDDLREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++P +G + N +PK+ + EF + VG + F G +VDVTG + GKGF Sbjct: 61 SNRPAKGHVAKANATPKRFIREFN-NVELSEYEVGQEITVDVFKAGDIVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G P RVFK K + G+MGG+R+T++NLEVV Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGGASFPSRVFKGKALPGQMGGDRITIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R +IL+KG VPG+KK S + ++ + KS Sbjct: 179 KVDAERNVILIKGNVPGSKK-SLVEIKTAIKS 209 >gi|221234243|ref|YP_002516679.1| 50S ribosomal protein L3 [Caulobacter crescentus NA1000] gi|13422579|gb|AAK23229.1| ribosomal protein L3 [Caulobacter crescentus CB15] gi|220963415|gb|ACL94771.1| LSU ribosomal protein L3P [Caulobacter crescentus NA1000] Length = 267 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 121/218 (55%), Positives = 156/218 (71%), Gaps = 2/218 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GV+A+KLGMT ++ G+ +PVTVL LD CQV RT++K+GY A+Q+GAG K KN Sbjct: 19 RTGVIAKKLGMTRFFDEAGQHVPVTVLSLDGCQVTGVRTVEKDGYTALQLGAGAKKAKNT 78 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 S MRG F+ V PK+ + EFRV+++ L+ VG+ + +F GQ VD+ G+T+GKGF+ Sbjct: 79 SNAMRGHFAKAAVEPKRVVAEFRVEEN-ALIEVGAELTADHFVAGQKVDIQGVTVGKGFA 137 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F KKMAG +G VT N+ V Sbjct: 138 GAMKRWNFGGLRATHGVSVSHRSHGSTGNRQDPGRTFPGKKMAGHLGQETVTTLNVTVWK 197 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 VD +RGLILVKG VPG + S++ VRD+ K A+ Sbjct: 198 VDVERGLILVKGAVPG-HEGSYVKVRDAVKKALPADAP 234 >gi|259415840|ref|ZP_05739760.1| 50S ribosomal protein L3 [Silicibacter sp. TrichCH4B] gi|259347279|gb|EEW59056.1| 50S ribosomal protein L3 [Silicibacter sp. TrichCH4B] Length = 239 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 133/215 (61%), Positives = 161/215 (74%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ +G++IPVTVL LD QVV RT DK+GY AVQ+GAG AKVK Sbjct: 1 MRSGIIAKKVGMTRLFMEDGKQIPVTVLSLDGLQVVAQRTEDKDGYTAVQLGAGSAKVKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK MRG F++ V PK+KL EFRV D L+ VG+ S +F GQ VDVTG +IGKGF Sbjct: 61 VSKAMRGHFAASKVEPKRKLVEFRV-PADGLIEVGAEISAEHFLTGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D RGL+ +KG VPG K+ W+ V+D+ K Sbjct: 180 KTDADRGLVFIKGAVPGP-KSGWVTVKDAVKKKAP 213 >gi|91774635|ref|YP_544391.1| 50S ribosomal protein L3P [Methylobacillus flagellatus KT] gi|122985649|sp|Q1H4N7|RL3_METFK RecName: Full=50S ribosomal protein L3 gi|91708622|gb|ABE48550.1| LSU ribosomal protein L3P [Methylobacillus flagellatus KT] Length = 214 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 95/212 (44%), Positives = 129/212 (60%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ EG +PVTVL + +V +T +GY ++QV GE + Sbjct: 1 MSLGLIGRKVGMTRIFTDEGESVPVTVLEVVPNRVTQIKTAASDGYTSLQVAYGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + K + G ++ VS + EF V D VG + F GQLVDVTG ++GKG Sbjct: 61 IGKALAGHYAKAGVSAGAGIKEFPVSDDVLANYSVGGQITVELFQPGQLVDVTGTSLGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSGA+KRHNF RA+HG S SH GS G QDPGRVF K+M G +G + TV+NLE+ Sbjct: 121 FSGAIKRHNFSSNRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMPGHLGAVKTTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+L+KG VPG+ K ++VR S K Sbjct: 181 VRVDAERNLLLIKGAVPGS-KGGDVVVRPSVK 211 >gi|209964040|ref|YP_002296955.1| ribosomal protein L3 [Rhodospirillum centenum SW] gi|226730556|sp|B6IRQ6|RL3_RHOCS RecName: Full=50S ribosomal protein L3 gi|209957506|gb|ACI98142.1| ribosomal protein L3 [Rhodospirillum centenum SW] Length = 235 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 131/219 (59%), Positives = 162/219 (73%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+KLGMT V+ EG +PVTVL LD QVV RT D++GY A+Q+GAG+AKVKN Sbjct: 1 MRSGLIAQKLGMTRVFTDEGEHVPVTVLKLDQVQVVAQRTEDRDGYTALQLGAGKAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K R F+ V PKKKL EFRV D L+ VG+ + +F GQ VDVTG TIG+GF Sbjct: 61 VAKAQREQFARAKVEPKKKLVEFRVTPD-ALIEVGAEITADHFVPGQFVDVTGTTIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G M+R NFGGLRATHGVS+SHRSHGSTG RQDPG+ FKNKKMAG G +VTV+NL+VV Sbjct: 120 TGPMRRWNFGGLRATHGVSVSHRSHGSTGGRQDPGKTFKNKKMAGHYGVEKVTVQNLKVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 VD +RGLILVKG +PG + W+L+RD+ K + Sbjct: 180 QVDVERGLILVKGAIPG-HEGGWVLIRDAVKKKLPDGAP 217 >gi|197287068|ref|YP_002152940.1| 50S ribosomal protein L3 [Proteus mirabilis HI4320] gi|227354934|ref|ZP_03839348.1| 50S ribosomal protein L3 [Proteus mirabilis ATCC 29906] gi|226730550|sp|B4F1I4|RL3_PROMH RecName: Full=50S ribosomal protein L3 gi|194684555|emb|CAR46379.1| 50S ribosomal protein L3 [Proteus mirabilis HI4320] gi|227165016|gb|EEI49855.1| 50S ribosomal protein L3 [Proteus mirabilis ATCC 29906] Length = 209 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 97/210 (46%), Positives = 134/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++N +V + L+K+GY A+QV G K V Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKDLEKDGYRAIQVTTGSKKANRVL 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRLLREFRLNEGEE-YTVGQSISVEIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG++G +VTV++LEVV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGQLGNEQVTVQSLEVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|153009286|ref|YP_001370501.1| 50S ribosomal protein L3 [Ochrobactrum anthropi ATCC 49188] gi|166233170|sp|A6X0B8|RL3_OCHA4 RecName: Full=50S ribosomal protein L3 gi|151561174|gb|ABS14672.1| ribosomal protein L3 [Ochrobactrum anthropi ATCC 49188] Length = 238 Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 134/219 (61%), Positives = 163/219 (74%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT VYN G +PVTVL ++NC VV RT++KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGLAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ V PK K+ EFRV D +LL VG+ + +F GQ VDVTG +IGKGF Sbjct: 61 TSKAMRGHFAKAEVEPKAKVAEFRVSPD-NLLEVGAEITAEHFVAGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNF G RA+HG SI+HR+HGSTG RQDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 120 AGVMKRHNFAGHRASHGNSITHRAHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 S D RGLILV+G VPG+ K +WI+VRD+ K ++ Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWIIVRDAVKVSLPENAP 217 >gi|294142933|ref|YP_003558911.1| 50S ribosomal protein L3 [Shewanella violacea DSS12] gi|293329402|dbj|BAJ04133.1| ribosomal protein L3 [Shewanella violacea DSS12] Length = 212 Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 91/213 (42%), Positives = 132/213 (61%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G +PVTV+ + + +V +TL+ +GY A+QV G K Sbjct: 1 MAIGLIGRKVGMTRIFCEDGVSVPVTVIEITSNRVTQVKTLETDGYRALQVTTGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G F+ V + L+E R+ D+ + + VG+ + F VDVTG + GKG Sbjct: 61 ITKPEAGHFAKAGVEAGRGLWEVRLANDEGEGIEVGAELNVDIFADIAKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF THG S++HRS+GS G Q PGRVFK KKM+G MG RVT +NL V Sbjct: 121 FQGGIKRWNFHAQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLNV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + VD +R L+LVKG VPGA + I ++ + K+ Sbjct: 181 IRVDAERNLLLVKGAVPGAINGNLI-IKPAVKA 212 >gi|300114736|ref|YP_003761311.1| 50S ribosomal protein L3 [Nitrosococcus watsonii C-113] gi|299540673|gb|ADJ28990.1| 50S ribosomal protein L3 [Nitrosococcus watsonii C-113] Length = 213 Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 100/213 (46%), Positives = 142/213 (66%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ EG IPVTV+ ++ +TL+++GY A QV GE + Sbjct: 1 MAIGLIGRKIGMTRVFTDEGASIPVTVIEATPNRISQVKTLERDGYQAAQVTVGERRPAR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP++G F+ V P +KL EFR + + + VG S F VGQ VDV G+T G+G Sbjct: 61 VTKPLKGHFAKAKVEPGRKLREFRFEIQKEKNIEVGDELKVSLFEVGQRVDVIGVTRGRG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G ++R++FGG A+HG S+SHR+ GS G Q PGRVFK KKMAG+MG R TV+NLE+ Sbjct: 121 FAGVVRRYHFGGGDASHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGQMGNVRRTVQNLEL 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD++R L+L+KG +PGA ++V+ + KS Sbjct: 181 VRVDEERQLLLIKGAIPGAPGGD-VIVKPAVKS 212 >gi|23502110|ref|NP_698237.1| 50S ribosomal protein L3 [Brucella suis 1330] gi|42559647|sp|Q8G076|RL3_BRUSU RecName: Full=50S ribosomal protein L3 gi|23348070|gb|AAN30152.1| ribosomal protein L3 [Brucella suis 1330] Length = 237 Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 138/219 (63%), Positives = 164/219 (74%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT VYN G +PVTVL ++NC VV RT++KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGVAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ V PK KL EFRV D +LL VG + +F GQ VDVTG +IGKGF Sbjct: 61 TSKAMRGHFAKAEVEPKAKLAEFRVSPD-NLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 S D RGLILV+G VPG+ K +WILVRD+ K+++ Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASLPENAP 217 >gi|114570345|ref|YP_757025.1| 50S ribosomal protein L3P [Maricaulis maris MCS10] gi|122315784|sp|Q0ANQ0|RL3_MARMM RecName: Full=50S ribosomal protein L3 gi|114340807|gb|ABI66087.1| LSU ribosomal protein L3P [Maricaulis maris MCS10] Length = 268 Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 130/211 (61%), Positives = 162/211 (76%), Gaps = 2/211 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GVVARKLGMT ++ +G +P TVLH+DN QVV H+T D++GY+A+Q+GAGEAK K Sbjct: 7 RTGVVARKLGMTRIFAEDGSHVPCTVLHMDNVQVVSHKTADRDGYVALQLGAGEAKAKRT 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 K MRG F+ V+PK+KL EFRV +D L+ VGS + +F GQ VDV G++IGKGF+ Sbjct: 67 PKAMRGHFAKAKVAPKRKLVEFRVAED-ALIEVGSELTADHFVPGQKVDVAGISIGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 GAMKRH FGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 126 GAMKRHGFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNIEVVR 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +RG++LVKG VPG+ W+ +RD+ K Sbjct: 186 VDVERGIVLVKGAVPGSA-GGWVELRDAIKG 215 >gi|300690160|ref|YP_003751155.1| 50S ribosomal subunit protein L3 [Ralstonia solanacearum PSI07] gi|299077220|emb|CBJ49846.2| 50S ribosomal subunit protein L3 [Ralstonia solanacearum PSI07] Length = 220 Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 94/213 (44%), Positives = 128/213 (60%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V+ +G IPVTVL + +V +T + +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + + EFR+ L +G F VGQ +DV G TIGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEIIVEFRIDAAKAAELKLGDTIDVDLFAVGQKIDVQGTTIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG TV+NL + Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LVKG VPGA K+ +++V + K+ Sbjct: 181 VRVDAERKLLLVKGAVPGA-KSGFVVVSPAVKA 212 >gi|304321440|ref|YP_003855083.1| 50S ribosomal protein L3 [Parvularcula bermudensis HTCC2503] gi|303300342|gb|ADM09941.1| 50S ribosomal protein L3 [Parvularcula bermudensis HTCC2503] Length = 309 Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 131/226 (57%), Positives = 165/226 (73%), Gaps = 9/226 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE------ 55 R+GV+A+KLGMT VY EG +P TV+ L+NCQVV HRT +++GY A+Q+GAGE Sbjct: 24 RTGVIAKKLGMTRVYTAEGTHVPCTVVSLENCQVVSHRTEERDGYSALQLGAGEYLNRKG 83 Query: 56 -AKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGM 114 AK+ VSK RG F+ NV+PK+KL EFRV+ D L+ +G+ + ++ GQ VDV G Sbjct: 84 EAKLGRVSKAARGHFAKANVTPKRKLAEFRVETDY-LIEIGASLTAEHYVPGQRVDVVGT 142 Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 +IGKGF+G MKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT Sbjct: 143 SIGKGFAGGMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGDVRVTT 202 Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220 +NLEV+ D RGLIL+KG VPG+ K SWIL+RD+ K + + Sbjct: 203 QNLEVIRTDVARGLILLKGAVPGS-KGSWILIRDAVKRVRPEEAPM 247 >gi|256159968|ref|ZP_05457686.1| 50S ribosomal protein L3 [Brucella ceti M490/95/1] gi|256255199|ref|ZP_05460735.1| 50S ribosomal protein L3 [Brucella ceti B1/94] gi|261222395|ref|ZP_05936676.1| 50S ribosomal protein L3 [Brucella ceti B1/94] gi|265998360|ref|ZP_06110917.1| 50S ribosomal protein L3 [Brucella ceti M490/95/1] gi|260920979|gb|EEX87632.1| 50S ribosomal protein L3 [Brucella ceti B1/94] gi|262552828|gb|EEZ08818.1| 50S ribosomal protein L3 [Brucella ceti M490/95/1] Length = 237 Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 137/219 (62%), Positives = 163/219 (74%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT VYN G +PVTVL ++NC VV RT++KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ V PK KL EFRV D +LL VG + +F GQ VDVTG +IGKGF Sbjct: 61 TSKAMRGHFAKAEVEPKAKLAEFRVSPD-NLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG A+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 120 AGVMKRHNFGGHHASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 S D RGLILV+G VPG+ K +WILVRD+ K+++ Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASLPENAP 217 >gi|160932201|ref|ZP_02079592.1| hypothetical protein CLOLEP_01036 [Clostridium leptum DSM 753] gi|156868803|gb|EDO62175.1| hypothetical protein CLOLEP_01036 [Clostridium leptum DSM 753] Length = 210 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 90/212 (42%), Positives = 129/212 (60%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +K+GMT +++ G+ +PVTV+ C V +T++ +GY AVQ+G G+ K Sbjct: 1 MQKGIIGKKIGMTQIFDENGKVVPVTVVEAGPCVVSQKKTVENDGYAAVQIGFGDLKAHK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V KPM G F+ NV+PK+ L EFR D D VG + F G VDVTG + GKG+ Sbjct: 61 VKKPMAGHFAKANVAPKRTLREFRFD-DIDAYNVGDLVKADVFAAGDKVDVTGTSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF L+ +HG R GS G DP RV+ KKMAG +G RVTV+NL+VV Sbjct: 120 AGVIKRWNFQRLKESHGSGPVARHGGSIGSCSDPSRVYPGKKMAGHLGSERVTVQNLQVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + LI +KG +PG + + + D+ K+ Sbjct: 180 KVDAENNLIAIKGAIPGPNGGTVV-IHDTVKA 210 >gi|218135281|ref|ZP_03464085.1| hypothetical protein BACPEC_03186 [Bacteroides pectinophilus ATCC 43243] gi|217990666|gb|EEC56677.1| hypothetical protein BACPEC_03186 [Bacteroides pectinophilus ATCC 43243] Length = 211 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 91/211 (43%), Positives = 124/211 (58%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G PVTVL C V +TL+ +GY AVQVG + + K Sbjct: 1 MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTLENDGYEAVQVGFADKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+G F VS K+ + EFR + + V F G +D T ++ GKGF Sbjct: 61 VNKPMKGHFDKAGVSYKRFVREFRFENASE-YNVKDEIKADIFAAGDKIDATAISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G PGRVFK K M G+MG R+T++NLEVV Sbjct: 120 QGAIKRHGQSRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGQMGAKRITIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + +ILVKG VPG KK S + ++++ K Sbjct: 179 RVDAENNIILVKGAVPGPKK-SLVTLKETVK 208 >gi|254714301|ref|ZP_05176112.1| 50S ribosomal protein L3 [Brucella ceti M644/93/1] gi|254717738|ref|ZP_05179549.1| 50S ribosomal protein L3 [Brucella ceti M13/05/1] gi|261219581|ref|ZP_05933862.1| 50S ribosomal protein L3 [Brucella ceti M13/05/1] gi|261322076|ref|ZP_05961273.1| 50S ribosomal protein L3 [Brucella ceti M644/93/1] gi|260924670|gb|EEX91238.1| 50S ribosomal protein L3 [Brucella ceti M13/05/1] gi|261294766|gb|EEX98262.1| 50S ribosomal protein L3 [Brucella ceti M644/93/1] Length = 237 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 137/219 (62%), Positives = 164/219 (74%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT VYN G +PVT+L ++NC VV RT++KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRVYNDAGEHVPVTILRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ V PK KL EFRV D +LL VG + +F GQ VDVTG +IGKGF Sbjct: 61 TSKAMRGHFAKAEVEPKAKLAEFRVSPD-NLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 S D RGLILV+G VPG+ K +WILVRD+ K+++ Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASLPENAP 217 >gi|187776576|ref|ZP_02993049.1| hypothetical protein CLOSPO_00090 [Clostridium sporogenes ATCC 15579] gi|187775235|gb|EDU39037.1| hypothetical protein CLOSPO_00090 [Clostridium sporogenes ATCC 15579] Length = 216 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 87/212 (41%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +KLGMT ++N G+ IPVTV+ C V+ +T++K+GY A+QV G+ + K Sbjct: 8 MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 67 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP++G F+ VS K+ + EF++ +D + L VG F G+ VD++G++ GKGF Sbjct: 68 RNKPVKGHFAKAGVSVKRHIKEFKL-EDSNSLEVGQEIKADVFEAGERVDISGVSKGKGF 126 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G ++R N THG S HR+ GS G DP R FKNK+M G MG TV NLEVV Sbjct: 127 QGTIRRWNAHRGPMTHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 185 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + ++ LIL+KG VPG K + +R++ K+ Sbjct: 186 RIIPEKNLILIKGGVPGPNKG-LVQIRNTVKA 216 >gi|161485649|ref|NP_420061.2| 50S ribosomal protein L3 [Caulobacter crescentus CB15] gi|42559686|sp|Q9A8V3|RL3_CAUCR RecName: Full=50S ribosomal protein L3 Length = 255 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 121/218 (55%), Positives = 156/218 (71%), Gaps = 2/218 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GV+A+KLGMT ++ G+ +PVTVL LD CQV RT++K+GY A+Q+GAG K KN Sbjct: 7 RTGVIAKKLGMTRFFDEAGQHVPVTVLSLDGCQVTGVRTVEKDGYTALQLGAGAKKAKNT 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 S MRG F+ V PK+ + EFRV+++ L+ VG+ + +F GQ VD+ G+T+GKGF+ Sbjct: 67 SNAMRGHFAKAAVEPKRVVAEFRVEEN-ALIEVGAELTADHFVAGQKVDIQGVTVGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F KKMAG +G VT N+ V Sbjct: 126 GAMKRWNFGGLRATHGVSVSHRSHGSTGNRQDPGRTFPGKKMAGHLGQETVTTLNVTVWK 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 VD +RGLILVKG VPG + S++ VRD+ K A+ Sbjct: 186 VDVERGLILVKGAVPG-HEGSYVKVRDAVKKALPADAP 222 >gi|332187797|ref|ZP_08389531.1| 50S ribosomal protein L3 [Sphingomonas sp. S17] gi|332012147|gb|EGI54218.1| 50S ribosomal protein L3 [Sphingomonas sp. S17] Length = 244 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 130/219 (59%), Positives = 161/219 (73%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+KLGMT ++ +GR +PVTVL L+ QVV R +D++GY AVQ+GAG AK KN Sbjct: 1 MRTGVIAKKLGMTRLFQDDGRHVPVTVLALEGVQVVARREMDRDGYTAVQLGAGVAKTKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP RG F V PK+ L EFRV +D LL VG+ + +F GQ VD+ G T GKGF Sbjct: 61 VAKPQRGHFGKAEVEPKQVLVEFRV-NEDGLLDVGAEIAADHFVPGQYVDIQGRTQGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGRVFKNKKMAG MG T +NLE+V Sbjct: 120 AGAMKRWNFGGLRATHGVSVSHRSHGSTGNRQDPGRVFKNKKMAGHMGDKNRTQQNLEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 S D +RGLI VKG VPG+ K W++V+D+ K + + Sbjct: 180 STDVERGLIFVKGSVPGS-KGGWLIVKDAVKVSRHADAP 217 >gi|239832122|ref|ZP_04680451.1| 50S ribosomal protein L3 [Ochrobactrum intermedium LMG 3301] gi|239824389|gb|EEQ95957.1| 50S ribosomal protein L3 [Ochrobactrum intermedium LMG 3301] Length = 246 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 135/219 (61%), Positives = 164/219 (74%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT VYN G +PVTVL ++NC VV RT++KNGY AVQ+G G AKVKN Sbjct: 9 MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGIAKVKN 68 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ V PK K+ EFRV D +LL VG+ + +F GQ VDVTG +IGKGF Sbjct: 69 TSKAMRGHFAKAEVEPKAKVAEFRVSPD-NLLEVGAEITAEHFVAGQKVDVTGTSIGKGF 127 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HR+HGSTG RQDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 128 AGVMKRHNFGGHRASHGNSITHRAHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 187 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 S D RGLILV+G VPG+ K +WI+VRD+ K ++ Sbjct: 188 STDSDRGLILVRGAVPGS-KGAWIIVRDAVKVSLPENAP 225 >gi|260584416|ref|ZP_05852163.1| 50S ribosomal protein L3 [Granulicatella elegans ATCC 700633] gi|260157934|gb|EEW93003.1| 50S ribosomal protein L3 [Granulicatella elegans ATCC 700633] Length = 210 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 86/212 (40%), Positives = 126/212 (59%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT + G IPVTV+ + V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGKKVGMTQYFTEAGELIPVTVVEVTPNVVLQLKTIENDGYEAVQLGFDDLREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++P +G + N +PK+ + EF + VG + F G +VDVTG + GKGF Sbjct: 61 SNRPAKGHVAKANATPKRFIREFN-NVELSEYEVGQEITVDVFKAGDIVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G P RVFK K + G+MGGNR+T++NLEVV Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGGASFPSRVFKGKALPGQMGGNRITIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R +IL+KG VPG+KK S + ++ + KS Sbjct: 179 KVDAERNVILIKGNVPGSKK-SLVEIKTAIKS 209 >gi|187476539|ref|YP_784563.1| 50S ribosomal protein L3 [Bordetella avium 197N] gi|109893413|sp|Q2L2G0|RL3_BORA1 RecName: Full=50S ribosomal protein L3 gi|115421125|emb|CAJ47609.1| 50S ribosomal protein L3 [Bordetella avium 197N] Length = 233 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 100/216 (46%), Positives = 130/216 (60%), Gaps = 3/216 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+V RK+GMT ++ EG IPVTVL + N +V ++L+ +GY A+QV G + V Sbjct: 16 RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQVKSLESDGYAAIQVTYGNRRASRV 75 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119 +K G F+ L EFR+ GSV + F GQ VDVTG TIGKG Sbjct: 76 TKAEAGHFAKAGAEAGSILKEFRLDPTRAAEFTAGSVIAVESVFEAGQQVDVTGTTIGKG 135 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRHNFG RA+HG S SHR GS G QDPGR+F K+MAG +G TV+NL+V Sbjct: 136 FAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMAGHLGDVTRTVQNLDV 195 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 V VD +RGL+LVKG VPG ++VR + K+ Sbjct: 196 VRVDVERGLLLVKGAVPG-HAGGDVIVRPAVKAPAK 230 >gi|300718705|ref|YP_003743508.1| 50S ribosomal protein L3 [Erwinia billingiae Eb661] gi|299064541|emb|CAX61661.1| 50S ribosomal protein L3 [Erwinia billingiae Eb661] Length = 209 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 135/210 (64%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V ++L+ +GY A+QV AG K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYTAIQVTAGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR + D+ VG + F+ + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRTVEGDEF-AVGQSINVDIFSDVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGCDLIVKPAVKA 209 >gi|238792938|ref|ZP_04636568.1| 50S ribosomal protein L3 [Yersinia intermedia ATCC 29909] gi|238727792|gb|EEQ19316.1| 50S ribosomal protein L3 [Yersinia intermedia ATCC 29909] Length = 209 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 132/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V ++L+ +GY AVQV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYRAVQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ + + G S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLPEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG MG RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGHMGDERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA + I V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGATGGNLI-VKPAVKA 209 >gi|163745537|ref|ZP_02152897.1| ribosomal protein L3 [Oceanibulbus indolifex HEL-45] gi|161382355|gb|EDQ06764.1| ribosomal protein L3 [Oceanibulbus indolifex HEL-45] Length = 292 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 128/215 (59%), Positives = 158/215 (73%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSGV+A+K+GMT ++ +G++IPVTVL LD QVV RT D++GY AVQ+GAG AK K Sbjct: 2 LRSGVIAKKVGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTADRDGYTAVQLGAGSAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ MRG F++ V PK+K+ EFRV + +L VG ++ GQ VDV G +IGKGF Sbjct: 62 TSQAMRGHFAAAKVEPKRKVAEFRVDAE-AMLEVGEEIIADHYFAGQYVDVAGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D RGLI+VKG VPG+ K W+ V+D+ K Sbjct: 181 KTDSARGLIMVKGAVPGS-KGGWVTVKDAVKKPFP 214 >gi|307946286|ref|ZP_07661621.1| 50S ribosomal protein L3 [Roseibium sp. TrichSKD4] gi|307769950|gb|EFO29176.1| 50S ribosomal protein L3 [Roseibium sp. TrichSKD4] Length = 240 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 132/215 (61%), Positives = 161/215 (74%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT +YN G +PVTVL L+ CQVV HRT +KNGY A+QVG G AKV+N Sbjct: 1 MRSGVIAQKVGMTRIYNDAGANVPVTVLRLEKCQVVAHRTEEKNGYTALQVGVGLAKVRN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 K MRG ++ V PK+KL EFRV D +++ VG+ + ++ GQ VDVTG +IGKGF Sbjct: 61 TPKAMRGHYAVAKVEPKRKLAEFRVSAD-NMIDVGAEITADHYVEGQFVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SISHRSHGSTG QDPGRVFK KKMAG MG RVT +NL+VV Sbjct: 120 AGVMKRHNFGGGRASHGNSISHRSHGSTGQCQDPGRVFKGKKMAGHMGDARVTTQNLKVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D +RGLI+V+G VPG K WILVRD+ K A+ Sbjct: 180 RTDVERGLIMVEGSVPG-TKGGWILVRDAIKKALP 213 >gi|212708981|ref|ZP_03317109.1| hypothetical protein PROVALCAL_00013 [Providencia alcalifaciens DSM 30120] gi|212688347|gb|EEB47875.1| hypothetical protein PROVALCAL_00013 [Providencia alcalifaciens DSM 30120] Length = 209 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++N +V +T + +GY A+QV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKTAETDGYNAIQVTTGSKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L EFR ++ + VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRILREFRTEEGAEF-NVGQSISVEIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSNLIVKPAVKA 209 >gi|296268550|ref|YP_003651182.1| 50S ribosomal protein L3 [Thermobispora bispora DSM 43833] gi|296091337|gb|ADG87289.1| ribosomal protein L3 [Thermobispora bispora DSM 43833] Length = 218 Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 128/215 (59%), Gaps = 2/215 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ +KLGMT V++ R +PVTV+ C V RT +K+GY A+Q+G G+ + V+ Sbjct: 6 KGVLGKKLGMTQVFDEANRVVPVTVVEAGPCVVTRVRTPEKDGYSAIQLGYGQIDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ + N++P++ E R D +G + F G VDVTG + GKGF+G Sbjct: 66 KPLGDYLRKHNITPRRYFAEIRTD-DASEYTLGQEITVDIFQPGDYVDVTGRSKGKGFAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F GL +HG HRS GS G PGRVFK +MAGRMG R TV+NL+V +V Sbjct: 125 VMKRHGFRGLGGSHGTQRKHRSPGSIGACATPGRVFKGLRMAGRMGNARTTVQNLKVQAV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 D ++ LILVKG +PGA S +L+R + K K Sbjct: 185 DAEKNLILVKGAIPGAN-GSLVLIRTAVKKGAAAK 218 >gi|163733828|ref|ZP_02141270.1| ribosomal protein L3 [Roseobacter litoralis Och 149] gi|161392939|gb|EDQ17266.1| ribosomal protein L3 [Roseobacter litoralis Och 149] Length = 286 Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats. Identities = 128/215 (59%), Positives = 161/215 (74%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSGV+A+K+GMT ++ +G++IPVTVL LD QVV RT DK+GY AVQ+GAG AK K Sbjct: 2 LRSGVIAKKVGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTSDKDGYSAVQLGAGTAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ MRG F++ V PK+K+ EFRV + +L+ VG + +++ GQ VDV G +IGKGF Sbjct: 62 TSQAMRGHFAAAKVEPKRKVAEFRVDAE-NLIGVGEEITANHYFEGQFVDVAGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D RGLI+VKG VPG+ K W+ V+D+ K Sbjct: 181 RTDADRGLIMVKGAVPGS-KGGWVTVKDAVKKPFP 214 >gi|37528543|ref|NP_931888.1| 50S ribosomal protein L3 [Photorhabdus luminescens subsp. laumondii TTO1] gi|42559593|sp|Q7MYF1|RL3_PHOLL RecName: Full=50S ribosomal protein L3 gi|36787981|emb|CAE17098.1| 50S ribosomal protein L3 [Photorhabdus luminescens subsp. laumondii TTO1] Length = 209 Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats. Identities = 93/210 (44%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ +++ +V + LD +GY A+QV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIEDNRVTQVKELDNDGYRAIQVTTGSKKASRVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRILREFRLSEGEE-YAVGQSISVEIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF A+HG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDASHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPG+ + I V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGSTGGNLI-VKPAVKA 209 >gi|284006163|emb|CBA71405.1| 50S ribosomal protein L3 [Arsenophonus nasoniae] Length = 209 Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 135/210 (64%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++N +V ++L+ +GY A+QV G K V Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKSLETDGYNAIQVTTGSKKANRVK 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L EFR+ ++++ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRILREFRLSENEEFT-VGQSISVEIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSNLIVKPAVKA 209 >gi|319899099|ref|YP_004159192.1| 50S ribosomal protein L3 [Bartonella clarridgeiae 73] gi|319403063|emb|CBI76618.1| 50S ribosomal protein L3 [Bartonella clarridgeiae 73] Length = 246 Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats. Identities = 133/219 (60%), Positives = 161/219 (73%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT +YN G +PVTVL LD CQVV RT++KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLDKCQVVAQRTVEKNGYTAVQLGVGLAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ +RG F+ V PK K+ EFRV D +LL VG+ + +F GQ VDVTG +IGKGF Sbjct: 61 TSRALRGHFAKAAVEPKAKIAEFRVSPD-NLLDVGTEITVEHFVPGQRVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EV+ Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNVEVI 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 S D RGLILV+G V G+ K SWILVRD+ K + Sbjct: 180 STDVDRGLILVRGSVSGS-KGSWILVRDAVKKRLPDNAP 217 >gi|320094580|ref|ZP_08026346.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 178 str. F0338] gi|319978495|gb|EFW10072.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 178 str. F0338] Length = 221 Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats. Identities = 95/209 (45%), Positives = 135/209 (64%), Gaps = 2/209 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RK+GMT V++ +GR +P+TV+ + V RT + +GY A+Q+G GE + V+KP Sbjct: 15 LLGRKIGMTQVWDADGRLVPLTVVQVGTNVVTQVRTEEVDGYSAIQLGFGEIDPRKVTKP 74 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 ++G F+ V+P++ L E R + D VG S F GQ VDV+G T GKGF+G M Sbjct: 75 LQGHFAKAGVAPRRHLAEVRTSEHDS-YEVGQELDASTFEAGQSVDVSGNTKGKGFAGVM 133 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH F G+ A+HG +HR GS G PGR+FK +MAGRMGGNR TV+NL + +VD Sbjct: 134 KRHGFAGVSASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGGNRRTVQNLRIQAVDT 193 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++GL+L+ G +PG KN +LVR + K A Sbjct: 194 EKGLLLISGAIPGP-KNGVVLVRSAVKGA 221 >gi|317049840|ref|YP_004117488.1| 50S ribosomal protein L3 [Pantoea sp. At-9b] gi|316951457|gb|ADU70932.1| 50S ribosomal protein L3 [Pantoea sp. At-9b] Length = 208 Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats. Identities = 97/210 (46%), Positives = 134/210 (63%), Gaps = 3/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG+V +K+GMT ++ +G IPVTV+ ++ +V +TL+ +GY A+QV G K V+ Sbjct: 2 SGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKTLENDGYQAIQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR + + VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRTEG--EEYSVGQNISVEIFAEVKKVDVTGTSKGKGFAG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++LEVV V Sbjct: 120 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLEVVRV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 180 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 208 >gi|110678718|ref|YP_681725.1| ribosomal protein L3 [Roseobacter denitrificans OCh 114] gi|123362126|sp|Q16AF4|RL3_ROSDO RecName: Full=50S ribosomal protein L3 gi|109454834|gb|ABG31039.1| ribosomal protein L3 [Roseobacter denitrificans OCh 114] Length = 286 Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats. Identities = 126/215 (58%), Positives = 161/215 (74%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSGV+A+K+GMT ++ +G++IPVTVL LD QVV RT +K+GY AVQ+GAG AK K Sbjct: 2 LRSGVIAKKVGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTSEKDGYSAVQLGAGTAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ MRG F++ V PK+K+ EFRV + +L+ VG + +++ GQ VDV G +IGKGF Sbjct: 62 TSQAMRGHFAAAKVEPKRKVAEFRVDPE-NLIGVGEEITANHYFEGQFVDVAGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D RGLI+VKG VPG+ K W+ V+D+ K Sbjct: 181 RTDANRGLIMVKGAVPGS-KGGWVTVKDAVKKPFP 214 >gi|110833258|ref|YP_692117.1| 50S ribosomal protein L3 [Alcanivorax borkumensis SK2] gi|123149718|sp|Q0VSK3|RL3_ALCBS RecName: Full=50S ribosomal protein L3 gi|110646369|emb|CAL15845.1| 50S ribosomal protein L3 [Alcanivorax borkumensis SK2] Length = 211 Score = 267 bits (684), Expect = 5e-70, Method: Composition-based stats. Identities = 98/214 (45%), Positives = 130/214 (60%), Gaps = 3/214 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GV+ RK GMT V+ EG +PVTV+ + +V +T + +GY AVQV GE + Sbjct: 1 MAIGVIGRKCGMTRVFTEEGVSVPVTVIEVGPNRVSQVKTEESDGYQAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ V + ++EFR + GS + F GQ++DVTG + GKGF Sbjct: 61 VTKAQAGHFAKAGVEAGRGVWEFR--AEAGEFEAGSSVTVEGFEAGQMIDVTGTSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF ATHG S+SHR+ GS G Q PGRVFK KKMAG +G RVTV+NLEVV Sbjct: 119 AGGVKRWNFSTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHLGAERVTVQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 VD + L+LVKG VPGA ++VR + K+ Sbjct: 179 RVDADKNLLLVKGAVPGATGGD-VIVRLAVKAKA 211 >gi|222148366|ref|YP_002549323.1| 50S ribosomal protein L3 [Agrobacterium vitis S4] gi|254803647|sp|B9JVN7|RL3_AGRVS RecName: Full=50S ribosomal protein L3 gi|221735354|gb|ACM36317.1| 50S ribosomal protein L3 [Agrobacterium vitis S4] Length = 213 Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats. Identities = 148/215 (68%), Positives = 173/215 (80%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G +PVTVL LDNCQV+ RT+DK+GY AVQ+GAG+AKVKN Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHVPVTVLRLDNCQVLAQRTVDKHGYTAVQLGAGQAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F++ NV PK KL EFRV +D +L+ VGS +F GQLVDVTG TIGKGF Sbjct: 61 TSKAMRGNFAAANVEPKAKLVEFRVSED-NLMDVGSELKAGHFEAGQLVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRATHGVS+SHRSHGSTG QDPG+V+K K+MAG MG RVT +NLEVV Sbjct: 120 AGAMKRHNFGGLRATHGVSVSHRSHGSTGSNQDPGKVWKGKRMAGHMGQTRVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 S D+ RGLILVKG VPG+ K SWI+VRD+ KSA Sbjct: 180 STDEDRGLILVKGAVPGS-KGSWIIVRDAVKSAAK 213 >gi|307294974|ref|ZP_07574816.1| 50S ribosomal protein L3 [Sphingobium chlorophenolicum L-1] gi|306879448|gb|EFN10666.1| 50S ribosomal protein L3 [Sphingobium chlorophenolicum L-1] Length = 251 Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats. Identities = 128/219 (58%), Positives = 160/219 (73%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR IPVTVL L+ QVV + ++++GY+AVQ+GAG AKVKN Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHIPVTVLALEGNQVVARKEVERDGYVAVQLGAGVAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP RG F+ V PK +L EFRV +D LL VG+ + +F GQLVDV G T GKGF Sbjct: 61 VAKPQRGHFAKAEVEPKARLVEFRVAED-ALLDVGAEIAADHFIAGQLVDVAGHTQGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG T +NLE+V Sbjct: 120 AGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRERTQQNLEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 D +RGL+ VKG VPGA K +W+ V D+ K Sbjct: 180 RTDVERGLLFVKGSVPGA-KGTWLTVSDAVKVKRPADAP 217 >gi|292492421|ref|YP_003527860.1| ribosomal protein L3 [Nitrosococcus halophilus Nc4] gi|291581016|gb|ADE15473.1| ribosomal protein L3 [Nitrosococcus halophilus Nc4] Length = 216 Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats. Identities = 101/215 (46%), Positives = 140/215 (65%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RKLGMT V+ EG IPVTV+ ++ +TL+++ Y A+QV GE + Sbjct: 1 MAIGLVGRKLGMTRVFTDEGESIPVTVIEATPNRISQIKTLERDSYRALQVTLGEKRPSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP++G F+ V P +KL EFR+ + + GS F GQ VDVTG T G+G Sbjct: 61 VTKPLKGHFAKAGVEPGRKLHEFRLAEGEGADAEAGSELKVGLFEAGQKVDVTGTTRGRG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G ++R+ FGG A+HG S+SHR+ GS G Q PGRVFK KKMAG+MG + TV+NLE+ Sbjct: 121 FAGVVRRYRFGGGDASHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGQMGNVQRTVQNLEL 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 V VD++R L+LVKG +PGA + V+ + K+AV Sbjct: 181 VRVDEERHLLLVKGAIPGAPGGDVV-VKPAAKAAV 214 >gi|309782834|ref|ZP_07677554.1| 50S ribosomal protein L3 [Ralstonia sp. 5_7_47FAA] gi|308918258|gb|EFP63935.1| 50S ribosomal protein L3 [Ralstonia sp. 5_7_47FAA] Length = 221 Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats. Identities = 92/216 (42%), Positives = 128/216 (59%), Gaps = 2/216 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTVL + + +V +T + +GY AVQV G + Sbjct: 5 MSLGLVGRKVGMTRIFTDDGDSIPVTVLEVGDNRVTQIKTDETDGYTAVQVTFGTRRASR 64 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + + EFRV G+ S F VGQ +DV G+TIGKG Sbjct: 65 VTKPLAGHLAKAGVEAGEVIKEFRVDAARAAEFQPGANISVDLFEVGQKIDVQGVTIGKG 124 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG TV+NLE+ Sbjct: 125 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLEI 184 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +D +R L+LVKG +PGA K ++V + K+ Sbjct: 185 AKIDAERKLLLVKGAIPGA-KGGQVIVTPAVKARAK 219 >gi|307132839|ref|YP_003884855.1| 50S ribosomal subunit protein L3 [Dickeya dadantii 3937] gi|306530368|gb|ADN00299.1| 50S ribosomal subunit protein L3 [Dickeya dadantii 3937] Length = 209 Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats. Identities = 97/210 (46%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V +TL+ +GY AVQV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKTLENDGYSAVQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L EFR+ D + VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRVLREFRL-ADGEEFAVGQDISVEIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|94498476|ref|ZP_01305032.1| ribosomal protein L3 [Sphingomonas sp. SKA58] gi|94422019|gb|EAT07064.1| ribosomal protein L3 [Sphingomonas sp. SKA58] Length = 252 Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats. Identities = 128/219 (58%), Positives = 161/219 (73%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR +PVTVL L+ QVV + D++GY+AVQ+GAG AKVKN Sbjct: 2 MRTGVIAKKVGMTRLFQEDGRHVPVTVLALEGNQVVARKETDRDGYIAVQLGAGVAKVKN 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP RG F+ V PK +L EFRV +D LL VG+ + +F GQLVDV G T GKGF Sbjct: 62 VAKPQRGQFAKAEVEPKARLVEFRVAED-ALLDVGAEIAADHFVAGQLVDVAGHTQGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG T +NLE+V Sbjct: 121 AGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRERTQQNLEIV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 D +RGL+ VKG VPGA K +W+ V+D+ K + Sbjct: 181 RTDVERGLLFVKGSVPGA-KGTWLTVKDAVKVPRHADAP 218 >gi|15889242|ref|NP_354923.1| 50S ribosomal protein L3 [Agrobacterium tumefaciens str. C58] gi|42559664|sp|Q8UE18|RL3_AGRT5 RecName: Full=50S ribosomal protein L3 gi|15157069|gb|AAK87708.1| 50S ribosomal protein L3 [Agrobacterium tumefaciens str. C58] Length = 213 Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats. Identities = 141/215 (65%), Positives = 170/215 (79%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G IPVTVL LDN QVV RT DKNGY AVQ+GAG++KVKN Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHIPVTVLRLDNVQVVAQRTEDKNGYTAVQLGAGQSKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +K +RG F++ NV PK KL EFRV + +L+ +G+ + ++F GQLVDVTG TIGKGF Sbjct: 61 TTKALRGHFAAANVEPKAKLVEFRVSPE-NLIDIGATLTANHFQSGQLVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGG RA+HG S+SHR+HGSTG QDPGRV+K K+MAG MG RVT +NLEVV Sbjct: 120 AGAMKRHNFGGGRASHGNSVSHRAHGSTGNNQDPGRVWKGKRMAGHMGQTRVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 S D+ RGLILVKG VPG+ K SWI+VRD+ KSA Sbjct: 180 STDEDRGLILVKGAVPGS-KGSWIIVRDAVKSAAK 213 >gi|301104340|ref|XP_002901255.1| 50S ribosomal protein L3-2 [Phytophthora infestans T30-4] gi|262101189|gb|EEY59241.1| 50S ribosomal protein L3-2 [Phytophthora infestans T30-4] Length = 285 Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats. Identities = 105/211 (49%), Positives = 135/211 (63%), Gaps = 2/211 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K+GM V++ G R TVL ++ CQV +T D++G+ A+Q+G G K KNV Sbjct: 39 RTGLLAVKIGMMPVWDNFGYRHNCTVLQVEECQVTQVKTADRHGFNALQLGVGLRKPKNV 98 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SKP+ G S V K++L EFRV +D LLP+G+ S +F GQ VDV G++ GKGF Sbjct: 99 SKPVLGHLSKAGVPAKRQLQEFRVSED-ALLPLGTTLSALHFNAGQYVDVCGISKGKGFQ 157 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MK HNF G A+HG S + R GSTG QDPG+VFK KKM GRMGGNRVT NL + Sbjct: 158 GVMKLHNFAGQPASHGNSKTQRHMGSTGQCQDPGKVFKGKKMPGRMGGNRVTRDNLWIAK 217 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D R LI VKG VPG + V D+ K Sbjct: 218 IDVDRNLIYVKGSVPG-NNGGIVRVTDARKK 247 >gi|225387237|ref|ZP_03757001.1| hypothetical protein CLOSTASPAR_00989 [Clostridium asparagiforme DSM 15981] gi|225046655|gb|EEG56901.1| hypothetical protein CLOSTASPAR_00989 [Clostridium asparagiforme DSM 15981] Length = 211 Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats. Identities = 86/211 (40%), Positives = 124/211 (58%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT +++ G IPVTVL C V +T+D +GY AVQVG + + K Sbjct: 1 MKKAILATKVGMTQIFDENGVLIPVTVLQAGPCVVTQVKTVDNDGYKAVQVGFVDKRDKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G F VS K+ + E R++ ++ V F G +D T ++ GKGF Sbjct: 61 VNKPQKGHFDKAGVSYKRYVRELRLENAEE-YSVKDEIKADIFAQGDKIDATAISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR+ HG S HR GS G PGRVFK K M G+MG ++T++NLEVV Sbjct: 120 QGAIKRYGQSRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGQMGNKQITIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + L+L+KG VPG KK S + ++++ K Sbjct: 179 KVDTENNLLLIKGAVPGPKK-SLVTIKETVK 208 >gi|167463902|ref|ZP_02328991.1| Ribosomal protein L3 [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381126|ref|ZP_08055129.1| 50S ribosomal protein L3-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154702|gb|EFX46973.1| 50S ribosomal protein L3-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 208 Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats. Identities = 88/212 (41%), Positives = 121/212 (57%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT V+ EG +PVTV+ C V+ + + +GY A+QVG + K K Sbjct: 1 MTKGILGKKLGMTQVFTPEGLVVPVTVIQAGPCVVLQKKDSENDGYEAIQVGFEDKKEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G N +PK+ + EFR + D VG F G+ VDVTG + GKGF Sbjct: 61 ANKPEIGHAKKANTTPKRYVQEFRGVQLSD-YEVGQELKADLFAEGEFVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRHN +HG S HR GS G RVFK K + G MG VT++NL+V+ Sbjct: 120 QGVIKRHNQSRGPMSHG-SRYHRGPGSMGSIA-ANRVFKGKNLPGHMGHETVTLQNLQVI 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R +ILVKG +PG KNS++ V+ + K Sbjct: 178 KVDAERNVILVKGSIPGP-KNSYVKVQSAVKK 208 >gi|317494342|ref|ZP_07952756.1| 50S ribosomal protein L3 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917592|gb|EFV38937.1| 50S ribosomal protein L3 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 209 Score = 267 bits (684), Expect = 7e-70, Method: Composition-based stats. Identities = 98/210 (46%), Positives = 132/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V +TLD +GY AVQV G K VS Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKTLDNDGYCAVQVTTGAKKANRVS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRTLREFRLNEGEEFT-VGQSISVEIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA I V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGATGGDLI-VKPAVKA 209 >gi|291521898|emb|CBK80191.1| 50S ribosomal protein L3, bacterial [Coprococcus catus GD/7] Length = 209 Score = 267 bits (684), Expect = 7e-70, Method: Composition-based stats. Identities = 96/212 (45%), Positives = 129/212 (60%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ K+GMT V++ +G PVTVL C V +T++ +GY AVQVG G+ + K Sbjct: 1 MKKAILTTKVGMTQVFSEDGVLTPVTVLQAGPCVVTQVKTVENDGYSAVQVGFGDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G F+ V+ K+ L EFR+ +D + +G F G VD T + GKGF Sbjct: 61 VNKPKKGHFAKAGVTAKRFLKEFRL-EDAESYTLGQEIKADVFVAGDKVDATAKSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G PGRVFK K M G MG RVTV+NLEVV Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGSATTPGRVFKGKHMPGHMGAVRVTVQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 SVD ++ LILVKG VPG KK S +++++S K+ Sbjct: 179 SVDAEKNLILVKGAVPGPKK-SLVMLKESVKA 209 >gi|83594020|ref|YP_427772.1| 50S ribosomal protein L3 [Rhodospirillum rubrum ATCC 11170] gi|109893549|sp|Q2RQW0|RL3_RHORT RecName: Full=50S ribosomal protein L3 gi|83576934|gb|ABC23485.1| LSU ribosomal protein L3P [Rhodospirillum rubrum ATCC 11170] Length = 235 Score = 267 bits (684), Expect = 7e-70, Method: Composition-based stats. Identities = 129/215 (60%), Positives = 159/215 (73%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ EG +PVTVL ++ CQVV RT + +GY AVQ+GAG AKVK Sbjct: 1 MRSGLIAQKVGMTRLFTDEGTHVPVTVLKVEACQVVAVRTSETDGYTAVQLGAGVAKVKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F++ V PKKK+ EFRV +D LL G+ S ++F GQ VD+ G TIGKGF Sbjct: 61 TSKAMRGHFAAAKVEPKKKVVEFRVSEDC-LLEPGAELSAAHFVAGQKVDIAGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNF GL ATHGVS+SHRSHGSTG QDPGRVFK KKMAG MG R+T ++L VV Sbjct: 120 AGAMKRHNFRGLEATHGVSVSHRSHGSTGQCQDPGRVFKGKKMAGHMGDTRITQQSLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 + D RGLILVKG VPGA +W+ VRD+ K + Sbjct: 180 ATDADRGLILVKGSVPGAD-GAWLEVRDAVKKKLP 213 >gi|307136201|gb|ADN34039.1| 50S ribosomal protein l3 [Cucumis melo subsp. melo] Length = 328 Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats. Identities = 105/214 (49%), Positives = 146/214 (68%), Gaps = 2/214 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GV+A K GM+ +++ G RIP+TVL +D+ V +T++K G A+Q+G G+ K K++ Sbjct: 79 RTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKEGITALQIGCGQKKEKHL 138 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SKP G F + V K+KL EF V +D LLPVG+ +F GQ VDVTG++ GKGF Sbjct: 139 SKPELGHFRAQGVPLKRKLKEFPVSQD-ALLPVGTEIGARHFVPGQYVDVTGISRGKGFQ 197 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F G+ A+HG S+SHRS GSTG R PG+VFK +KMAGRMGG + TVKN+ + Sbjct: 198 GVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGGKQRTVKNVWIYK 257 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +D R LI VKG +PGA+ S++ ++D+ +N Sbjct: 258 IDPARNLIWVKGPIPGAE-GSFVFIKDAMYKRLN 290 >gi|78221846|ref|YP_383593.1| 50S ribosomal protein L3 [Geobacter metallireducens GS-15] gi|109893431|sp|Q39Y06|RL3_GEOMG RecName: Full=50S ribosomal protein L3 gi|78193101|gb|ABB30868.1| LSU ribosomal protein L3P [Geobacter metallireducens GS-15] Length = 210 Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats. Identities = 92/212 (43%), Positives = 129/212 (60%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++A+KLGMT ++ +GRRIPVTV+ C V+ +T++ +GY A+QVG Sbjct: 1 MKKGLIAKKLGMTQIFADDGRRIPVTVVEAGPCIVLQKKTVETDGYNAIQVGFLAKDADK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + + G S + EFRV +D D +G + F G VDVTG +IGKGF Sbjct: 61 SGRALVGHCKSAGQGVFTYIREFRV-EDVDRYTIGDSITAEIFAPGDYVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR F G R++HG S HR+ GS G P RVFKNKKM G++G RVTV+ L+VV Sbjct: 120 QGVIKRWGFRGGRSSHG-SCFHRAPGSIGSSAWPSRVFKNKKMPGQLGNERVTVQRLQVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD L+L++G +PGA KN +L++DS K+ Sbjct: 179 RVDTADNLLLIRGAIPGA-KNGILLLKDSVKA 209 >gi|229594830|ref|XP_001032401.3| ribosomal protein L3 containing protein [Tetrahymena thermophila] gi|225566556|gb|EAR84738.3| ribosomal protein L3 containing protein [Tetrahymena thermophila SB210] Length = 439 Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats. Identities = 99/216 (45%), Positives = 144/216 (66%), Gaps = 2/216 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++ KLGMT +++ G+ +TV+ +D CQVV +T +K+G A+Q+G GE +K + Sbjct: 185 RTGILGYKLGMTSIWDKWGKLHALTVIQIDRCQVVQVKTEEKDGVNALQLGVGEKSLKRI 244 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G ++ PK+ L EF+V D LP G + S +F GQ VD+ G+++GKGF+ Sbjct: 245 NKPTIGHLMKNDIPPKRHLKEFKVSPDC-FLPAGYMLSARHFVPGQYVDIQGISVGKGFA 303 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR NF ATHG S+SHR+ GSTG RQDPGRVFKNKKMAG MG +VT+ +L+V Sbjct: 304 GTVKRWNFKMQDATHGNSLSHRAPGSTGQRQDPGRVFKNKKMAGHMGCEKVTIMDLQVYK 363 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 +D +R L+ ++G VPG S + +RD+FK V + Sbjct: 364 IDVERSLVYIRGHVPGKP-GSLVQIRDAFKKQVQNE 398 >gi|15612697|ref|NP_241000.1| 50S ribosomal protein L3 [Bacillus halodurans C-125] gi|7674305|sp|Q9Z9L4|RL3_BACHD RecName: Full=50S ribosomal protein L3 gi|4512404|dbj|BAA75271.1| rplC homologue (identity of 81% to B. subtilis ) [Bacillus halodurans] gi|10172746|dbj|BAB03853.1| 50S ribosomal protein L3 [Bacillus halodurans C-125] Length = 209 Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats. Identities = 96/212 (45%), Positives = 130/212 (61%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ G IPVTV+ V+ +T+D +GY AVQ+G + K N Sbjct: 1 MSKGILGKKVGMTQVFAENGDVIPVTVIEAAPNVVLQKKTVDSDGYEAVQLGFDDQKQNN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +PK+ + E R D+ VG F G +VDVTG + GKGF Sbjct: 61 ANKPEKGHAAKAETAPKRFIKEIRGVNLDE-FEVGQEIKVDAFAEGDIVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GA+KRHN +HG S HR GS G DP RVFK K + GRMGG +VTV+NLE++ Sbjct: 120 AGAIKRHNQARGPMSHG-SRYHRRPGSMGPV-DPNRVFKGKALPGRMGGEQVTVQNLEII 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGAKK S++ VR + KS Sbjct: 178 KVDAERNLLLVKGNVPGAKK-SYVTVRSAIKS 208 >gi|330432124|gb|AEC17183.1| 50S ribosomal protein L3 [Gallibacterium anatis UMN179] Length = 209 Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats. Identities = 96/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT ++N +G IPVTV+ ++ +V +TL+ +GY AVQV G K +V+ Sbjct: 2 IGLIGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTLETDGYCAVQVTTGSKKASHVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V + L+EFRV + ++ +G + F + VDVTG + GKG++G Sbjct: 62 KPEAGHFVKAGVEAGRGLWEFRVAEGEEFT-LGQEINVDIFADVKKVDVTGTSKGKGYAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PGRVFK KKM+G +G RVTV++LEVV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGRVFKGKKMSGHLGNERVTVQSLEVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA I V+ + K+ Sbjct: 181 DAERKLLLVKGAVPGATGGDLI-VKPAVKA 209 >gi|329898794|ref|ZP_08272466.1| LSU ribosomal protein L3p (L3e) [gamma proteobacterium IMCC3088] gi|328920746|gb|EGG28208.1| LSU ribosomal protein L3p (L3e) [gamma proteobacterium IMCC3088] Length = 211 Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats. Identities = 98/212 (46%), Positives = 128/212 (60%), Gaps = 1/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT V+ +G IPVTV+ + +V + LD +GY A+QV G K Sbjct: 1 MTIGLVGRKTGMTRVFTEDGVSIPVTVVEVSPNRVTQIKELDADGYRAIQVTTGTRKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G ++ V L+EFR++ +D VG+ + F VGQ VDV G + GKGF Sbjct: 61 VNKSAAGHYAKAGVEAGVGLWEFRLEAGEDAPEVGAELTVGRFEVGQKVDVAGKSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF ATHG S+SHR+ GS G Q PGRVFK KKMAG+MG VT + LEVV Sbjct: 121 QGGVKRWNFKMQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGQMGNVAVTTQGLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA + VR + K+ Sbjct: 181 RVDAERNLLLIKGAVPGAPGGDVV-VRPAVKA 211 >gi|251787971|ref|YP_003002692.1| 50S ribosomal protein L3 [Dickeya zeae Ech1591] gi|247536592|gb|ACT05213.1| ribosomal protein L3 [Dickeya zeae Ech1591] Length = 209 Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats. Identities = 99/210 (47%), Positives = 134/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ EG IPVTV+ ++ +V +TL+ +GY AVQV AG K V+ Sbjct: 2 IGLVGKKVGMTRIFTEEGVSIPVTVIEIEANRVTQVKTLENDGYRAVQVTAGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L EFR+ D + VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRVLREFRL-ADSEEFAVGQDISVEIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|323173956|gb|EFZ59584.1| ribosomal protein L3 family protein [Escherichia coli LT-68] Length = 209 Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats. Identities = 96/210 (45%), Positives = 134/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ + ++ PVG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLAEGEEF-PVGQSISVELFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|239825693|ref|YP_002948317.1| 50S ribosomal protein L3 [Geobacillus sp. WCH70] gi|259646548|sp|C5D3R7|RL3_GEOSW RecName: Full=50S ribosomal protein L3 gi|239805986|gb|ACS23051.1| ribosomal protein L3 [Geobacillus sp. WCH70] Length = 211 Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats. Identities = 88/215 (40%), Positives = 127/215 (59%), Gaps = 4/215 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T++K+GY A+Q+G + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTIEKDGYEAIQLGFEDISEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G + N +PK+ + E R D+ VG F G +VDVTG++ GKGF Sbjct: 61 ANKPQIGHAAKANTAPKRFIREIRGANIDE-YEVGQEVKVDIFAEGDIVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G P RVFK+K++ GRMGG RVT++NL++V Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGAIA-PNRVFKSKELPGRMGGQRVTIQNLKIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 VD +R L+L+KG VPG +K ++V+ + K+ Sbjct: 178 KVDPERNLLLIKGNVPGPRKG-LVIVKSAVKAKAK 211 >gi|253998014|ref|YP_003050077.1| 50S ribosomal protein L3 [Methylovorus sp. SIP3-4] gi|313200081|ref|YP_004038739.1| 50S ribosomal protein L3 [Methylovorus sp. MP688] gi|253984693|gb|ACT49550.1| ribosomal protein L3 [Methylovorus sp. SIP3-4] gi|312439397|gb|ADQ83503.1| ribosomal protein L3 [Methylovorus sp. MP688] Length = 214 Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 131/215 (60%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ EG IPVTVL + +V +T +GY +QV GE + Sbjct: 1 MSLGLIGRKVGMTRVFTDEGESIPVTVLEVVPNRVTQVKTPSSDGYAGLQVAHGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K + G ++ V+ + EF V +D VG + F GQ VDVTG+++GKG Sbjct: 61 VTKALAGHYAKAGVAAGSGIKEFAVAEDVLANYAVGGQITVELFQAGQYVDVTGVSLGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+GA+KRHNF RA+HG S SH GS G QDPGRVF K+M G +G + TV+NL++ Sbjct: 121 FAGAIKRHNFSSNRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMPGHLGAVKTTVQNLQI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 V VD +R L+L+KG VPG+ K ++VR + K+ Sbjct: 181 VRVDAERNLLLIKGAVPGS-KGGDVVVRPAVKAGA 214 >gi|167767803|ref|ZP_02439856.1| hypothetical protein CLOSS21_02338 [Clostridium sp. SS2/1] gi|317497095|ref|ZP_07955422.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 5_1_63FAA] gi|167710542|gb|EDS21121.1| hypothetical protein CLOSS21_02338 [Clostridium sp. SS2/1] gi|291558860|emb|CBL37660.1| LSU ribosomal protein L3P [butyrate-producing bacterium SSC/2] gi|316895640|gb|EFV17795.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 5_1_63FAA] Length = 209 Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats. Identities = 88/212 (41%), Positives = 127/212 (59%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ K+GMT ++N +G PVTVL C V +T + +GY AVQVG + K K Sbjct: 1 MKKAILTTKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTEENDGYSAVQVGFVDKKEKG 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G F V+PK+ + EFR + ++ VG F G +D T + GKG+ Sbjct: 61 INKPQKGHFDKAGVAPKRFVREFRFENAEE-YTVGQEIKADIFAAGDKIDATATSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH + HG S HR GS G DP +VFK KKM G+MG RVT++NLE+V Sbjct: 120 AGGIKRHGLKSGPSAHG-SKYHRHAGSNGMASDPSKVFKGKKMPGQMGAERVTIQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + +ILVKG VPG KK S +++++S K+ Sbjct: 179 KVDADQNIILVKGAVPGPKK-SLVMLKESVKA 209 >gi|256821662|ref|YP_003145625.1| 50S ribosomal protein L3 [Kangiella koreensis DSM 16069] gi|256795201|gb|ACV25857.1| ribosomal protein L3 [Kangiella koreensis DSM 16069] Length = 210 Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats. Identities = 99/212 (46%), Positives = 128/212 (60%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V K GMT V+ +G IPVTV+ D ++ +T D +GY AVQ+ G K Sbjct: 1 MAIGIVGIKRGMTRVFTEDGVSIPVTVVEADPNRIAQLKTTDVDGYEAVQITTGSRKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SK G + V + L+EFRV D VG V F GQ VDVTG + GKG+ Sbjct: 61 ISKAEAGHYKKAGVEAGRSLWEFRV-NSLDGFEVGGVVKVDIFEAGQKVDVTGTSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF G +THG S+SHR+ GS G Q PGRVFK KKM+G MG RVTV+ LEVV Sbjct: 120 AGVIKRWNFRGQDSTHGNSLSHRAPGSIGQNQTPGRVFKGKKMSGHMGAERVTVQTLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA ++VR + K+ Sbjct: 180 RVDAERNLLLIKGAVPGATGGD-VIVRPAEKA 210 >gi|254427943|ref|ZP_05041650.1| ribosomal protein L3 [Alcanivorax sp. DG881] gi|196194112|gb|EDX89071.1| ribosomal protein L3 [Alcanivorax sp. DG881] Length = 211 Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats. Identities = 98/214 (45%), Positives = 130/214 (60%), Gaps = 3/214 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GV+ RK GMT V+ EG +PVTV+ + +V +T + +GY AVQV GE + Sbjct: 1 MAIGVIGRKCGMTRVFTEEGVSVPVTVIEVSPNRVSQVKTEESDGYQAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ V + ++EFR + GS + F GQ++DVTG + GKGF Sbjct: 61 VTKAQAGHFAKAGVEAGRGVWEFR--AEAGEFEAGSAVTVEGFEAGQMIDVTGSSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF ATHG S+SHR+ GS G Q PGRVFK KKMAG +G RVTV+NLEVV Sbjct: 119 AGGVKRWNFSTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHLGAERVTVQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 VD + L+LVKG VPGA ++VR + K+ Sbjct: 179 RVDADKNLLLVKGAVPGATGGD-VIVRLAVKAKA 211 >gi|294010613|ref|YP_003544073.1| ribosomal protein L3 [Sphingobium japonicum UT26S] gi|292673943|dbj|BAI95461.1| ribosomal protein L3 [Sphingobium japonicum UT26S] Length = 251 Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats. Identities = 128/219 (58%), Positives = 160/219 (73%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+GV+A+K+GMT ++ +GR IPVTVL L+ QVV + ++++GY+AVQ+GAG AKVKN Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHIPVTVLALEGNQVVARKEVERDGYVAVQLGAGVAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP RG F+ V PK +L EFRV +D LL VG+ + +F GQLVDV G T GKGF Sbjct: 61 VAKPQRGHFAKAEVEPKARLVEFRVAED-ALLDVGAEIAADHFIAGQLVDVAGHTQGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG T +NLE+V Sbjct: 120 AGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRERTQQNLEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 D +RGL+ VKG VPGA K +W+ V D+ K Sbjct: 180 RTDVERGLLFVKGSVPGA-KGTWLTVCDAVKVKRPADAP 217 >gi|148381421|ref|YP_001255962.1| ribosomal protein L3 [Clostridium botulinum A str. ATCC 3502] gi|153932935|ref|YP_001385796.1| 50S ribosomal protein L3 [Clostridium botulinum A str. ATCC 19397] gi|153937726|ref|YP_001389203.1| 50S ribosomal protein L3 [Clostridium botulinum A str. Hall] gi|166233132|sp|A7FZ69|RL3_CLOB1 RecName: Full=50S ribosomal protein L3 gi|166233133|sp|A5I7K6|RL3_CLOBH RecName: Full=50S ribosomal protein L3 gi|148290905|emb|CAL85041.1| 50S ribosomal protein L3 [Clostridium botulinum A str. ATCC 3502] gi|152928979|gb|ABS34479.1| 50S ribosomal protein L3 [Clostridium botulinum A str. ATCC 19397] gi|152933640|gb|ABS39139.1| 50S ribosomal protein L3 [Clostridium botulinum A str. Hall] Length = 209 Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats. Identities = 85/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +KLGMT ++N G+ IPVTV+ C V+ +T++K+GY A+QV G+ + K Sbjct: 1 MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP++G F+ VS K+ + EF++ +D + L +G F G+ VD++G++ GKGF Sbjct: 61 RNKPIKGHFAKAGVSVKRHIKEFKL-EDSNSLEIGQEIKADVFEAGERVDISGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G ++R N +HG S HR+ GS G DP R FKNK+M G MG TV NLEVV Sbjct: 120 QGTIRRWNAHRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + ++ LIL+KG VPG K + +R++ K+ Sbjct: 179 RIIPEKNLILIKGGVPGPNKG-LVQIRNTVKA 209 >gi|311109612|ref|YP_003982465.1| 50S ribosomal protein L3 [Achromobacter xylosoxidans A8] gi|310764301|gb|ADP19750.1| ribosomal protein L3 [Achromobacter xylosoxidans A8] Length = 229 Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats. Identities = 100/216 (46%), Positives = 132/216 (61%), Gaps = 3/216 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+V RK+GMT ++ EG IPVTVL + N +V ++L+ +GY A+QV G + V Sbjct: 12 RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQVKSLETDGYAAIQVAYGTRRASRV 71 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119 ++P G ++ L EFR+ GSV + F GQ VDVTG TIGKG Sbjct: 72 AQPQTGHYAKAGAEAGSILKEFRLDPARAAEFAAGSVIAVESVFEAGQQVDVTGTTIGKG 131 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRHNFG RA+HG S SHR GS G QDPGR+F K+MAG +G TV+NL+V Sbjct: 132 FAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMAGHLGDVTRTVQNLDV 191 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 V VD +RGL+LVKG VPG + I+VR + K+ Sbjct: 192 VRVDVERGLLLVKGAVPG-HAGADIIVRPAIKAPAK 226 >gi|302390958|ref|YP_003826778.1| 50S ribosomal protein L3P [Acetohalobium arabaticum DSM 5501] gi|302203035|gb|ADL11713.1| LSU ribosomal protein L3P [Acetohalobium arabaticum DSM 5501] Length = 209 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 92/212 (43%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ +K+GMT +++ EG IPVTV+ C +V +T +K+GY A+Q+G GEAK Sbjct: 1 MTREILGKKVGMTQIFDDEGEVIPVTVIEAGPCSIVQKKTEEKDGYKAIQLGFGEAKESK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP++G F V PK+ + E R+ ++D+ VG F VG VDVTG + GKGF Sbjct: 61 LNKPLKGHFDKYGVEPKEYIREVRINEEDE-YEVGDEIKADIFAVGDRVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF THG S ++R GS G DP RVFK KKM GRMG +VT++NL+V Sbjct: 120 AGTVKRWNFNLGPKTHG-SRNYRLPGSIGASADPARVFKGKKMPGRMGREQVTIQNLKVA 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++ ++ VKG VPG KK + + +++S K Sbjct: 179 KVDPEKNILAVKGAVPGPKK-ALVRIKESVKG 209 >gi|295401920|ref|ZP_06811883.1| 50S ribosomal protein L3 [Geobacillus thermoglucosidasius C56-YS93] gi|312109261|ref|YP_003987577.1| 50S ribosomal protein L3 [Geobacillus sp. Y4.1MC1] gi|294976050|gb|EFG51665.1| 50S ribosomal protein L3 [Geobacillus thermoglucosidasius C56-YS93] gi|311214362|gb|ADP72966.1| 50S ribosomal protein L3 [Geobacillus sp. Y4.1MC1] Length = 211 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 88/215 (40%), Positives = 128/215 (59%), Gaps = 4/215 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T++K+GY A+Q+G + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTIEKDGYEAIQLGFEDLSEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G + N +PK+ + E R D+ VG F+ G +VDVTG++ GKGF Sbjct: 61 ANKPQIGHAAKANTAPKRFIREIRGANIDE-YEVGQEVKVDIFSEGDIVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G P RVFK+K++ GRMGG RVT++NL++V Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGAIA-PNRVFKSKELPGRMGGQRVTIQNLKIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 VD +R L+L+KG VPG +K ++V+ + K+ Sbjct: 178 KVDPERNLLLIKGNVPGPRKG-LVIVKSAVKAKAK 211 >gi|227821756|ref|YP_002825726.1| 50S ribosomal protein L3 [Sinorhizobium fredii NGR234] gi|227340755|gb|ACP24973.1| 50S ribosomal protein L3 [Sinorhizobium fredii NGR234] Length = 257 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 141/213 (66%), Positives = 171/213 (80%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G IPVTVL L+NCQVV RT +KNGY AVQ+GAG +KVKN Sbjct: 30 MRSGVIAQKVGMTRVYNDAGEHIPVTVLRLENCQVVAQRTEEKNGYTAVQLGAGRSKVKN 89 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +K +RG F++ +V PK K+ EFRV D +L+ +G+ + S+F GQLVDVTG TIGKGF Sbjct: 90 TTKALRGHFAAASVEPKAKVVEFRVTAD-NLIDIGAELTASHFVAGQLVDVTGTTIGKGF 148 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GA+KRHNFGGLRATHGVS+SHRSHGSTG QDPGRV+K K+MAG MG RVT +NLEVV Sbjct: 149 AGAIKRHNFGGLRATHGVSVSHRSHGSTGSNQDPGRVWKGKRMAGHMGQTRVTTQNLEVV 208 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 S D+ RGLILVKG VPG+ K +WI+VRD+ KS Sbjct: 209 STDEDRGLILVKGAVPGS-KGAWIVVRDAIKSG 240 >gi|222085675|ref|YP_002544205.1| 50S ribosomal protein L3 [Agrobacterium radiobacter K84] gi|221723123|gb|ACM26279.1| 50S ribosomal protein L3 [Agrobacterium radiobacter K84] Length = 219 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 147/215 (68%), Positives = 174/215 (80%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G +PVTVL ++ CQVV RT++KNGY AVQ+GAG+AKVKN Sbjct: 7 MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMEGCQVVAQRTVEKNGYTAVQLGAGQAKVKN 66 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK +RG F+ +V PK KL EFRV DD+LL VG+ ++F+ GQLVDVTG TIGKGF Sbjct: 67 TSKALRGHFAVASVEPKAKLVEFRVS-DDNLLEVGTEIKAAHFSAGQLVDVTGTTIGKGF 125 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG RVT +NLEVV Sbjct: 126 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 185 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 S D+ RGLILVKG VPG+ K +WI+VRD+ KSA Sbjct: 186 STDEDRGLILVKGAVPGS-KGAWIIVRDAVKSAAK 219 >gi|299473316|emb|CBN77715.1| Ribosomal protein L3 [Ectocarpus siliculosus] Length = 369 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 107/213 (50%), Positives = 139/213 (65%), Gaps = 2/213 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 RSG +A K+G +++ G R PVTVL LD C+VV +T + +GY ++Q+G GE K KNV Sbjct: 117 RSGALAMKVGSMAIFDSWGVRHPVTVLQLDECEVVQVKTTETDGYTSLQLGVGERKTKNV 176 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP F V+PK+KL EFRV + LLPVG +F GQ VDV G + GKGF Sbjct: 177 NKPDAERFRRAGVNPKRKLMEFRVSAE-ALLPVGFQLRAQHFVAGQKVDVCGTSKGKGFQ 235 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR F G RA+HGVS + R GSTG QDPGRVFK KKM GRMG +RVTV+NL+++ Sbjct: 236 GGMKRWGFKGQRASHGVSKTPRHIGSTGQCQDPGRVFKGKKMPGRMGTDRVTVQNLKILK 295 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 +D R L+ V+G VPG + ++ V D+ K A Sbjct: 296 MDPVRELLFVRGHVPG-QNGGFVRVTDAIKGAA 327 >gi|71278595|ref|YP_267622.1| 50S ribosomal protein L3 [Colwellia psychrerythraea 34H] gi|109893422|sp|Q487Z3|RL3_COLP3 RecName: Full=50S ribosomal protein L3 gi|71144335|gb|AAZ24808.1| ribosomal protein L3 [Colwellia psychrerythraea 34H] Length = 212 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 96/213 (45%), Positives = 136/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V+ +G PVTV+ ++ +V +T+D +GY A+QV G+ K Sbjct: 1 MTIGLVGRKVGMTRVFTEDGVSTPVTVIEVEANRVAQVKTVDNDGYSALQVTTGKRKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP G F+ + + L+EFR+ + + + GS + F +LVDVTG + GKG Sbjct: 61 VTKPAAGHFAKAGIEAGRGLWEFRLNENEGSDIEAGSEITVEVFNDTKLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHGVS+SHRS+GS G Q PGRVFK KKM+G MG R T +NLE+ Sbjct: 121 FQGGIKRWNFTMQHATHGVSLSHRSNGSLGQCQTPGRVFKGKKMSGHMGAVRCTTQNLEL 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+L+KG VPGA N ++++ + K+ Sbjct: 181 VRVDAERNLLLIKGAVPGAI-NGNVIIKPAVKA 212 >gi|22127860|ref|NP_671283.1| 50S ribosomal protein L3 [Yersinia pestis KIM 10] gi|45440067|ref|NP_991606.1| 50S ribosomal protein L3 [Yersinia pestis biovar Microtus str. 91001] gi|51597988|ref|YP_072179.1| 50S ribosomal protein L3 [Yersinia pseudotuberculosis IP 32953] gi|108809254|ref|YP_653170.1| 50S ribosomal protein L3 [Yersinia pestis Antiqua] gi|108814019|ref|YP_649786.1| 50S ribosomal protein L3 [Yersinia pestis Nepal516] gi|145597452|ref|YP_001161527.1| 50S ribosomal protein L3 [Yersinia pestis Pestoides F] gi|150260743|ref|ZP_01917471.1| 50S ribosomal protein L3 [Yersinia pestis CA88-4125] gi|153948634|ref|YP_001402863.1| 50S ribosomal protein L3 [Yersinia pseudotuberculosis IP 31758] gi|162419265|ref|YP_001605175.1| 50S ribosomal protein L3 [Yersinia pestis Angola] gi|165927910|ref|ZP_02223742.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str. F1991016] gi|165939998|ref|ZP_02228534.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str. IP275] gi|166010464|ref|ZP_02231362.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str. E1979001] gi|166213230|ref|ZP_02239265.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str. B42003004] gi|167398599|ref|ZP_02304123.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167418747|ref|ZP_02310500.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425639|ref|ZP_02317392.1| ribosomal protein L3 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170022544|ref|YP_001719049.1| 50S ribosomal protein L3 [Yersinia pseudotuberculosis YPIII] gi|186897184|ref|YP_001874296.1| 50S ribosomal protein L3 [Yersinia pseudotuberculosis PB1/+] gi|218927415|ref|YP_002345290.1| 50S ribosomal protein L3 [Yersinia pestis CO92] gi|229836309|ref|ZP_04456476.1| 50S ribosomal subunit protein L3 [Yersinia pestis Pestoides A] gi|229840067|ref|ZP_04460226.1| 50S ribosomal subunit protein L3 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842149|ref|ZP_04462304.1| 50S ribosomal subunit protein L3 [Yersinia pestis biovar Orientalis str. India 195] gi|229904551|ref|ZP_04519662.1| 50S ribosomal subunit protein L3 [Yersinia pestis Nepal516] gi|270488233|ref|ZP_06205307.1| 50S ribosomal protein L3 [Yersinia pestis KIM D27] gi|294502289|ref|YP_003566351.1| 50S ribosomal protein L3 [Yersinia pestis Z176003] gi|42559671|sp|Q8ZJA9|RL3_YERPE RecName: Full=50S ribosomal protein L3 gi|55977743|sp|P11252|RL3_YERPS RecName: Full=50S ribosomal protein L3 gi|123073062|sp|Q1CCU4|RL3_YERPN RecName: Full=50S ribosomal protein L3 gi|123245521|sp|Q1C2U7|RL3_YERPA RecName: Full=50S ribosomal protein L3 gi|166234609|sp|A4TGZ2|RL3_YERPP RecName: Full=50S ribosomal protein L3 gi|166990943|sp|A7FNN5|RL3_YERP3 RecName: Full=50S ribosomal protein L3 gi|226730592|sp|B2K5N0|RL3_YERPB RecName: Full=50S ribosomal protein L3 gi|226730593|sp|A9R8Z6|RL3_YERPG RecName: Full=50S ribosomal protein L3 gi|226730594|sp|B1JIW1|RL3_YERPY RecName: Full=50S ribosomal protein L3 gi|21960995|gb|AAM87534.1|AE014002_7 50S ribosomal subunit protein L3 [Yersinia pestis KIM 10] gi|45434922|gb|AAS60483.1| 50S ribosomal protein L3 [Yersinia pestis biovar Microtus str. 91001] gi|51591270|emb|CAH22936.1| 50S ribosomal protein L3 [Yersinia pseudotuberculosis IP 32953] gi|108777667|gb|ABG20186.1| LSU ribosomal protein L3P [Yersinia pestis Nepal516] gi|108781167|gb|ABG15225.1| LSU ribosomal protein L3P [Yersinia pestis Antiqua] gi|115346026|emb|CAL18892.1| 50S ribosomal protein L3 [Yersinia pestis CO92] gi|145209148|gb|ABP38555.1| LSU ribosomal protein L3P [Yersinia pestis Pestoides F] gi|149290151|gb|EDM40228.1| 50S ribosomal protein L3 [Yersinia pestis CA88-4125] gi|152960129|gb|ABS47590.1| ribosomal protein L3 [Yersinia pseudotuberculosis IP 31758] gi|162352080|gb|ABX86028.1| ribosomal protein L3 [Yersinia pestis Angola] gi|165912038|gb|EDR30679.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str. IP275] gi|165920186|gb|EDR37487.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str. F1991016] gi|165990554|gb|EDR42855.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str. E1979001] gi|166205528|gb|EDR50008.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str. B42003004] gi|166962741|gb|EDR58762.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051103|gb|EDR62511.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055329|gb|EDR65123.1| ribosomal protein L3 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749078|gb|ACA66596.1| ribosomal protein L3 [Yersinia pseudotuberculosis YPIII] gi|186700210|gb|ACC90839.1| ribosomal protein L3 [Yersinia pseudotuberculosis PB1/+] gi|229678669|gb|EEO74774.1| 50S ribosomal subunit protein L3 [Yersinia pestis Nepal516] gi|229690459|gb|EEO82513.1| 50S ribosomal subunit protein L3 [Yersinia pestis biovar Orientalis str. India 195] gi|229696433|gb|EEO86480.1| 50S ribosomal subunit protein L3 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706377|gb|EEO92384.1| 50S ribosomal subunit protein L3 [Yersinia pestis Pestoides A] gi|262360369|gb|ACY57090.1| 50S ribosomal protein L3 [Yersinia pestis D106004] gi|262364321|gb|ACY60878.1| 50S ribosomal protein L3 [Yersinia pestis D182038] gi|270336737|gb|EFA47514.1| 50S ribosomal protein L3 [Yersinia pestis KIM D27] gi|294352748|gb|ADE63089.1| 50S ribosomal protein L3 [Yersinia pestis Z176003] gi|320013342|gb|ADV96913.1| 50S ribosomal subunit protein L3 [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 209 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 131/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V ++L+ +GY AVQV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYRAVQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ + + G S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLPEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG MG RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHMGDERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA + I V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGATGGNLI-VKPAVKA 209 >gi|283796559|ref|ZP_06345712.1| 50S ribosomal protein L3 [Clostridium sp. M62/1] gi|291075973|gb|EFE13337.1| 50S ribosomal protein L3 [Clostridium sp. M62/1] gi|295092547|emb|CBK78654.1| 50S ribosomal protein L3, bacterial [Clostridium cf. saccharolyticum K10] gi|295115275|emb|CBL36122.1| 50S ribosomal protein L3, bacterial [butyrate-producing bacterium SM4/1] Length = 211 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 89/211 (42%), Positives = 123/211 (58%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G PVTVL C V +T + +GY AVQVG + + K Sbjct: 1 MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTAENDGYEAVQVGFVDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKP++G F VS K+ + EFR + + V F G +D T ++ GKGF Sbjct: 61 VSKPVKGHFDKAGVSYKRYVREFRFENASE-YSVKDEIKADIFAAGDKIDATAISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G PGRVFK K M G+MG +VT++NLE+V Sbjct: 120 QGAIKRHGQHRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGQMGHVKVTIQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + L+LVKG VPG KK S + ++++ K Sbjct: 179 KVDAENNLLLVKGAVPGPKK-SLVTIKETVK 208 >gi|187930364|ref|YP_001900851.1| 50S ribosomal protein L3 [Ralstonia pickettii 12J] gi|241664532|ref|YP_002982892.1| 50S ribosomal protein L3 [Ralstonia pickettii 12D] gi|226730553|sp|B2UEL9|RL3_RALPJ RecName: Full=50S ribosomal protein L3 gi|187727254|gb|ACD28419.1| ribosomal protein L3 [Ralstonia pickettii 12J] gi|240866559|gb|ACS64220.1| ribosomal protein L3 [Ralstonia pickettii 12D] Length = 217 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 92/216 (42%), Positives = 128/216 (59%), Gaps = 2/216 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTVL + + +V +T + +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTDDGDSIPVTVLEVGDNRVTQIKTDETDGYTAVQVTFGTRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + + EFRV G+ S F VGQ +DV G+TIGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEVIKEFRVDAARAAEFQPGANISVDLFEVGQKIDVQGVTIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG TV+NLE+ Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +D +R L+LVKG +PGA K ++V + K+ Sbjct: 181 AKIDAERKLLLVKGAIPGA-KGGQVIVTPAVKARAK 215 >gi|255556584|ref|XP_002519326.1| 50S ribosomal protein L3, putative [Ricinus communis] gi|223541641|gb|EEF43190.1| 50S ribosomal protein L3, putative [Ricinus communis] Length = 311 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 102/209 (48%), Positives = 143/209 (68%), Gaps = 2/209 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K GMT +++ G R+P+TVL +D+ V +T++K G A+Q+G G K K++ Sbjct: 65 RTGIIALKCGMTALWDKWGERVPITVLWVDDNIVTQVKTVEKEGIFALQIGYGHKKAKHL 124 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F + NV K+KL EF V +D L+PVG+ +F GQ VD+TG+T GKGF Sbjct: 125 TKPEVGHFRAHNVPLKRKLREFPVTED-ALIPVGTSLGVRHFVPGQFVDITGITRGKGFQ 183 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F G+ ATHG S+SHRS GSTG R PG+VFK KKM GRMGG + TVKN+ V Sbjct: 184 GGMKRHGFKGMPATHGASLSHRSGGSTGQRDAPGKVFKGKKMPGRMGGVQRTVKNVWVYK 243 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 +D R ++ V+G VPGA+ N ++ ++D+ Sbjct: 244 IDPTRNMMWVRGQVPGAEGN-FVFIKDAV 271 >gi|126736644|ref|ZP_01752384.1| ribosomal protein L3 [Roseobacter sp. CCS2] gi|126713957|gb|EBA10828.1| ribosomal protein L3 [Roseobacter sp. CCS2] Length = 283 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 123/213 (57%), Positives = 161/213 (75%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+G++A+K+GMT ++ +G++IPVTVL L+N QVV RT D NGY AVQ+GAG AK K Sbjct: 2 LRTGLIAKKVGMTRLFMEDGKQIPVTVLSLENLQVVAQRTADTNGYTAVQLGAGNAKAKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F++ V PK+K+ EFRV + +++ VG + +++ GQ VDV G +IGKGF Sbjct: 62 TSKAMRGHFAAAKVEPKRKVAEFRVAPE-NMINVGETLTANHYFEGQYVDVCGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG +VT +NL+VV Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAAKVTTQNLQVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D RG+I+VKG VPG+ K W+ ++D+ K Sbjct: 181 KTDADRGVIMVKGAVPGS-KGGWVTIKDAVKKP 212 >gi|258513640|ref|YP_003189862.1| 50S ribosomal protein L3 [Desulfotomaculum acetoxidans DSM 771] gi|257777345|gb|ACV61239.1| ribosomal protein L3 [Desulfotomaculum acetoxidans DSM 771] Length = 209 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 131/212 (61%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ +GR +PVTV+ C VV +T +++GY AVQ+G GE + + Sbjct: 1 MPKGILGKKVGMTQIFTEDGRALPVTVIEAGPCVVVQKKTPEQDGYAAVQLGFGEKRERL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP++G F V+P + L E RV +D D VG F+ G VDV G++ GKGF Sbjct: 61 FNKPLKGHFKKYGVTPMRYLKELRV-EDIDSYEVGQEIKADLFSKGDKVDVVGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNF HG S HR GS G + P RVFK +K+ G MG RVTV+NLE+V Sbjct: 120 AGGIKRHNFHRGPMAHG-SKYHRRPGSLGAKG-PARVFKGRKLPGHMGVERVTVQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R ++ VKG +PG KN +++ S K+ Sbjct: 178 KVDAERNILAVKGAIPG-NKNGLVMILTSKKA 208 >gi|325191529|emb|CCA25903.1| 50S ribosomal protein L32 putative [Albugo laibachii Nc14] Length = 280 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 102/215 (47%), Positives = 132/215 (61%), Gaps = 2/215 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K+GM V++ G TVL ++ CQV +T D +G+ A+Q+G G K +NV Sbjct: 38 RTGLLAVKIGMISVWDYYGVAHGCTVLQVEKCQVTQVKTSDIHGFNALQLGVGLRKPRNV 97 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP+ G + V PK++L EFRV +D LL G+ + +F GQ VDV G + GKGF Sbjct: 98 VKPLMGHLNKAGVPPKRQLQEFRVSED-ALLAAGTTLTAMHFVPGQYVDVCGTSKGKGFQ 156 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MK HNF G A+HG S +HR GSTG QDPGRVFK KKM GRMG RVT NL +V Sbjct: 157 GVMKLHNFAGQPASHGNSKTHRHMGSTGQCQDPGRVFKGKKMPGRMGNKRVTRDNLWIVK 216 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 +D R L+ VKG VPG K S + V D+ K Sbjct: 217 IDTVRNLLYVKGSVPG-TKGSIVRVTDARKKTPTA 250 >gi|323136086|ref|ZP_08071169.1| 50S ribosomal protein L3 [Methylocystis sp. ATCC 49242] gi|322399177|gb|EFY01696.1| 50S ribosomal protein L3 [Methylocystis sp. ATCC 49242] Length = 240 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 135/215 (62%), Positives = 159/215 (73%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G +PVTVL LD CQVV RT +KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKVGMTRVFTEAGEHVPVTVLKLDGCQVVAQRTKEKNGYTAVQLGIGRAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK R F++ V PK KL EFRV +++LLPVG+ + +F VGQ VDVTG T GKGF Sbjct: 61 VSKAERTRFAAAKVEPKMKLAEFRV-NEEELLPVGAEITADHFVVGQFVDVTGTTTGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR FGGLRA+HGVSISHRSHGSTG RQDPG+ FKNKKMAG MG RVT +NL VV Sbjct: 120 AGPMKRWGFGGLRASHGVSISHRSHGSTGGRQDPGKTFKNKKMAGHMGVERVTTQNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D +RGL+LV+G VPG WI VRD+ K A+ Sbjct: 180 QTDVERGLVLVEGAVPGTA-GGWIFVRDAVKRALP 213 >gi|153940129|ref|YP_001392834.1| 50S ribosomal protein L3 [Clostridium botulinum F str. Langeland] gi|168178832|ref|ZP_02613496.1| ribosomal protein L3 [Clostridium botulinum NCTC 2916] gi|170758623|ref|YP_001788821.1| 50S ribosomal protein L3 [Clostridium botulinum A3 str. Loch Maree] gi|166233134|sp|A7GJ74|RL3_CLOBL RecName: Full=50S ribosomal protein L3 gi|226725154|sp|B1KSM5|RL3_CLOBM RecName: Full=50S ribosomal protein L3 gi|152936025|gb|ABS41523.1| 50S ribosomal protein L3 [Clostridium botulinum F str. Langeland] gi|169405612|gb|ACA54023.1| 50S ribosomal protein L3 [Clostridium botulinum A3 str. Loch Maree] gi|182670248|gb|EDT82224.1| ribosomal protein L3 [Clostridium botulinum NCTC 2916] gi|295320814|gb|ADG01192.1| 50S ribosomal protein L3 [Clostridium botulinum F str. 230613] Length = 209 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 85/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +KLGMT ++N G+ IPVTV+ C V+ +T++K+GY A+QV G+ + K Sbjct: 1 MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP++G F+ VS K+ + EF++ +D + L +G F G+ VD++G++ GKGF Sbjct: 61 RNKPVKGHFAKAGVSVKRHIKEFKL-EDSNSLEIGQEIKADVFEAGERVDISGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G ++R N +HG S HR+ GS G DP R FKNK+M G MG TV NLEVV Sbjct: 120 QGTIRRWNAHRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + ++ LIL+KG VPG K + +R++ K+ Sbjct: 179 RIIPEKNLILIKGGVPGPNKG-LVQIRNTVKA 209 >gi|18146071|dbj|BAB82111.1| 50S ribosomal protein L3 [Clostridium perfringens str. 13] Length = 216 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 89/212 (41%), Positives = 129/212 (60%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT +++ GR IPVTV+ C VV +T++ +GY A+QVG GE + K Sbjct: 8 MKKAIIGKKVGMTQIFDENGRVIPVTVVEAGPCVVVQKKTVETDGYDAIQVGFGELREKL 67 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G F+ VS ++ L EFR +D VG F +G VDV+G++ GKGF Sbjct: 68 VNKPRKGHFAKAGVSLRRTLKEFR-MEDVANYNVGDEIKVDTFEIGDKVDVSGVSKGKGF 126 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR N +HG S HR+ GS G DP R FKNK+M G MG TV NLEVV Sbjct: 127 QGTIKRWNASRGPMSHG-SKFHRAPGSMGAASDPSRTFKNKRMPGHMGAKNTTVLNLEVV 185 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + ++ +IL+KG +PG K + + +R+S K+ Sbjct: 186 KIMPEKNIILIKGGIPGPNKGTVV-IRNSVKA 216 >gi|242237859|ref|YP_002986040.1| ribosomal protein L3 [Dickeya dadantii Ech703] gi|242129916|gb|ACS84218.1| ribosomal protein L3 [Dickeya dadantii Ech703] Length = 209 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 97/210 (46%), Positives = 134/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V +TL+ +GY AVQV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKTLENDGYRAVQVTTGAKKANRVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L EFR+ + +D VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRTLREFRLAEGEDF-AVGQNISVEIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|126176355|ref|YP_001052504.1| 50S ribosomal protein L3 [Shewanella baltica OS155] gi|152998749|ref|YP_001364430.1| 50S ribosomal protein L3 [Shewanella baltica OS185] gi|160873326|ref|YP_001552642.1| 50S ribosomal protein L3 [Shewanella baltica OS195] gi|217975201|ref|YP_002359952.1| 50S ribosomal protein L3 [Shewanella baltica OS223] gi|304412765|ref|ZP_07394367.1| 50S ribosomal protein L3 [Shewanella baltica OS183] gi|307307429|ref|ZP_07587164.1| 50S ribosomal protein L3 [Shewanella baltica BA175] gi|166234591|sp|A3DA72|RL3_SHEB5 RecName: Full=50S ribosomal protein L3 gi|166234592|sp|A6WHS8|RL3_SHEB8 RecName: Full=50S ribosomal protein L3 gi|189029479|sp|A9KWA2|RL3_SHEB9 RecName: Full=50S ribosomal protein L3 gi|254803689|sp|B8EBK5|RL3_SHEB2 RecName: Full=50S ribosomal protein L3 gi|125999560|gb|ABN63635.1| LSU ribosomal protein L3P [Shewanella baltica OS155] gi|151363367|gb|ABS06367.1| ribosomal protein L3 [Shewanella baltica OS185] gi|160858848|gb|ABX47382.1| ribosomal protein L3 [Shewanella baltica OS195] gi|217500336|gb|ACK48529.1| ribosomal protein L3 [Shewanella baltica OS223] gi|304348845|gb|EFM13261.1| 50S ribosomal protein L3 [Shewanella baltica OS183] gi|306910217|gb|EFN40650.1| 50S ribosomal protein L3 [Shewanella baltica BA175] gi|315265553|gb|ADT92406.1| 50S ribosomal protein L3 [Shewanella baltica OS678] Length = 212 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 93/213 (43%), Positives = 129/213 (60%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G IPVTV+ + +V +TL+ +GY A+QV G K Sbjct: 1 MAIGLIGRKVGMTRIFTEDGVSIPVTVIEVAGNRVTQVKTLETDGYRALQVTTGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFR-VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G F+ V + L+E R V + + + VG+ + F VDVTG + GKG Sbjct: 61 ITKPEAGHFAKSGVEAGRGLWEMRLVDGEGEGIEVGAELNVDIFADVAKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF THG S+SHRS+GS G Q PGRVFK KKM+G MG RVT +NL V Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLVV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LV+G VPGA I ++ + K+ Sbjct: 181 VRVDVERNLLLVRGAVPGATNGDLI-IKPAVKA 212 >gi|17547738|ref|NP_521140.1| 50S ribosomal protein L3 [Ralstonia solanacearum GMI1000] gi|42559667|sp|Q8XV12|RL3_RALSO RecName: Full=50S ribosomal protein L3 gi|17430043|emb|CAD16728.1| probable 50s ribosomal protein l3 [Ralstonia solanacearum GMI1000] Length = 220 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 91/213 (42%), Positives = 128/213 (60%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V+ +G IPVTVL + +V +T + +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGTRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + + EFR+ L +G F+V Q +DV G TIGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEIIVEFRIDATKAAELKLGDTIDVDLFSVDQKIDVQGTTIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR++F RA+HG S SH GS G QDPGRVF K+M G MG TV+NL + Sbjct: 121 YAGTIKRYHFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V +D +R L+LVKG VPGA K+ +++V + K+ Sbjct: 181 VRIDAERKLLLVKGAVPGA-KSGFVVVSPAVKA 212 >gi|110802837|ref|YP_699663.1| 50S ribosomal protein L3 [Clostridium perfringens SM101] gi|123341525|sp|Q0SQE4|RL3_CLOPS RecName: Full=50S ribosomal protein L3 gi|110683338|gb|ABG86708.1| 50S ribosomal protein L3 [Clostridium perfringens SM101] Length = 209 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 90/212 (42%), Positives = 129/212 (60%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT +++ GR IPVTV+ C VV +T++ +GY A+QVG GE + K Sbjct: 1 MKKAIIGKKVGMTQIFDENGRVIPVTVVEAGPCVVVQKKTVETDGYDAIQVGFGELREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP RG F+ VS ++ L EFR +D VG F +G VDV+G++ GKGF Sbjct: 61 VNKPRRGHFAKAGVSLRRTLKEFR-MEDVANYNVGDEIKVDTFEIGDKVDVSGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR N +HG S HR+ GS G DP R FKNK+M G MG TV NLEVV Sbjct: 120 QGTIKRWNASRGPMSHG-SKFHRAPGSMGAASDPSRTFKNKRMPGHMGAKNTTVLNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + ++ +IL+KG +PG K + + +R+S K+ Sbjct: 179 KIMPEKNIILIKGGIPGPNKGTIV-IRNSVKA 209 >gi|86357305|ref|YP_469197.1| 50S ribosomal protein L3 [Rhizobium etli CFN 42] gi|109893545|sp|Q2K9L6|RL3_RHIEC RecName: Full=50S ribosomal protein L3 gi|86281407|gb|ABC90470.1| 50S ribosomal protein L3 [Rhizobium etli CFN 42] Length = 213 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 147/215 (68%), Positives = 172/215 (80%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G +PVTVL +D CQVV RT++KNGY AVQ+GAG+AKVKN Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMDGCQVVATRTVEKNGYTAVQLGAGQAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ NV PK KL EFRV +D +LL +G+ +F GQLVDVTG TIGKGF Sbjct: 61 TSKAMRGNFAVANVEPKAKLAEFRVSED-NLLEIGTELKADHFAAGQLVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 S D+ RGLIL+KG VPG+ K +WI+VRD+ KSA Sbjct: 180 STDEDRGLILIKGAVPGS-KGAWIIVRDAVKSAAK 213 >gi|168181864|ref|ZP_02616528.1| 50S ribosomal protein L3 [Clostridium botulinum Bf] gi|237796942|ref|YP_002864494.1| 50S ribosomal protein L3 [Clostridium botulinum Ba4 str. 657] gi|259647405|sp|C3KVQ1|RL3_CLOB6 RecName: Full=50S ribosomal protein L3 gi|182674831|gb|EDT86792.1| 50S ribosomal protein L3 [Clostridium botulinum Bf] gi|229262333|gb|ACQ53366.1| 50S ribosomal protein L3 [Clostridium botulinum Ba4 str. 657] Length = 209 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 86/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +KLGMT ++N G+ IPVTV+ C V+ +T++K+GY A+QV G+ + K Sbjct: 1 MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP++G F+ VS K+ + EF++ +D + L +G F G+ VD++G++ GKGF Sbjct: 61 RNKPVKGHFAKAGVSVKRHIKEFKL-EDSNSLEIGQEIKADVFEAGERVDISGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G ++R N THG S HR+ GS G DP R FKNK+M G MG TV NLEVV Sbjct: 120 QGTIRRWNAHRGPMTHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + ++ LIL+KG VPG K + +R++ K+ Sbjct: 179 RIIPEKNLILIKGGVPGPNKG-LVQIRNTVKA 209 >gi|226950933|ref|YP_002806024.1| ribosomal protein L3 [Clostridium botulinum A2 str. Kyoto] gi|254803664|sp|C1FMV1|RL3_CLOBJ RecName: Full=50S ribosomal protein L3 gi|226840834|gb|ACO83500.1| ribosomal protein L3 [Clostridium botulinum A2 str. Kyoto] Length = 209 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 85/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +KLGMT ++N G+ IPVTV+ C V+ +T++K+GY A+QV G+ + K Sbjct: 1 MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP++G F+ VS K+ + EF++ +D + L +G F G+ VD++G++ GKGF Sbjct: 61 RNKPVKGHFAKAGVSVKRHIKEFKL-EDLNSLEIGQEIKADVFEAGERVDISGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G ++R N +HG S HR+ GS G DP R FKNK+M G MG TV NLEVV Sbjct: 120 QGTIRRWNAHRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + ++ LIL+KG VPG K + +R++ K+ Sbjct: 179 RIIPEKNLILIKGGVPGPNKG-LVQIRNTVKA 209 >gi|220921899|ref|YP_002497200.1| 50S ribosomal protein L3 [Methylobacterium nodulans ORS 2060] gi|254803681|sp|B8IS85|RL3_METNO RecName: Full=50S ribosomal protein L3 gi|219946505|gb|ACL56897.1| ribosomal protein L3 [Methylobacterium nodulans ORS 2060] Length = 251 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 133/220 (60%), Positives = 163/220 (74%), Gaps = 2/220 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G +PVTVL +D CQVV HRT++KNGY+A+QVG G+AKVKN Sbjct: 1 MRSGVIAQKVGMTRVFTDAGEHVPVTVLKVDQCQVVAHRTVEKNGYVALQVGVGKAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK RG F+ V PK+KL EFRV +D L+PVG+ + +F GQ VDVTG+T GKGF Sbjct: 61 VSKAERGRFAIAKVEPKRKLAEFRVSED-ALIPVGAEITADHFIPGQFVDVTGITTGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRA+HGVSISHRS GSTG RQDPG+ FKNKKM G +G RVT +NL VV Sbjct: 120 AGGMKRWNFGGLRASHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220 D +RGLILV+G VPG WI VRD+ K + + + Sbjct: 180 RTDPERGLILVEGAVPGVA-GGWIHVRDAVKRKLPAEAPM 218 >gi|255263954|ref|ZP_05343296.1| 50S ribosomal protein L3 [Thalassiobium sp. R2A62] gi|255106289|gb|EET48963.1| 50S ribosomal protein L3 [Thalassiobium sp. R2A62] Length = 292 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 125/215 (58%), Positives = 163/215 (75%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSG++A+K+GMT ++ +G++IPVTVL LD QVV RT + +GY AVQ+GAG AKVK Sbjct: 2 LRSGIIAKKVGMTRIFQEDGKQIPVTVLQLDKLQVVAQRTQETDGYTAVQLGAGTAKVKR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS+ MRG F++ V PK+++ EFRV ++L+ VG + +++ GQ VDV+G +IGKGF Sbjct: 62 VSQAMRGHFAAAKVEPKRRVAEFRV-AAENLINVGEEITANHYFEGQFVDVSGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG +VT +NL+VV Sbjct: 121 QGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAAKVTTQNLQVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D RGLI+VKG VPG+ K W+ V+D+ K + Sbjct: 181 KTDAGRGLIMVKGAVPGS-KGGWVTVKDAVKKPIP 214 >gi|49474404|ref|YP_032446.1| 50S ribosomal protein L3 [Bartonella quintana str. Toulouse] gi|81827601|sp|Q6FZC2|RL3_BARQU RecName: Full=50S ribosomal protein L3 gi|49239908|emb|CAF26306.1| 50s ribosomal protein l3 [Bartonella quintana str. Toulouse] Length = 246 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 133/215 (61%), Positives = 165/215 (76%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT VYN G +PVTVL L+NCQV+ RT++KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRVYNDAGEHVPVTVLRLENCQVIAQRTIEKNGYTAVQLGVGFAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ +RG F+ V+V PK K+ EFRV D +LL +G+ + +F GQ VDVTG +IGKGF Sbjct: 61 TSRALRGHFAKVSVEPKAKIAEFRVSPD-NLLDIGTEITAQHFVPGQRVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNIEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 S D +RGLILV+G V G+ K +WILVRD+ K + Sbjct: 180 STDVERGLILVRGAVSGS-KGAWILVRDAVKRPLP 213 >gi|242052463|ref|XP_002455377.1| hypothetical protein SORBIDRAFT_03g009550 [Sorghum bicolor] gi|241927352|gb|EES00497.1| hypothetical protein SORBIDRAFT_03g009550 [Sorghum bicolor] Length = 318 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 103/209 (49%), Positives = 144/209 (68%), Gaps = 2/209 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GV+ K GM+ +++ G ++P+TVL +D+ V +T +K G+ A+Q+GAG+ K K++ Sbjct: 71 RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVTQVKTAEKEGFFALQLGAGQKKEKHL 130 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F + V K+KL EF V +D LLPVG+ + +F GQ VDVTG+T GKGF+ Sbjct: 131 TKPEVGHFRAQGVPLKRKLREFPVTED-ALLPVGTTITVRHFLPGQFVDVTGITKGKGFA 189 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MK+H F G A+HG S+SHRS GSTG R PGRVFKN+KM GRMGG + TVKN+ V Sbjct: 190 GVMKKHGFSGGPASHGASLSHRSGGSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 249 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 +D R L+ +KG VPG + S++ V+DS Sbjct: 250 IDPARNLLYLKGQVPGPQ-GSFVFVKDSI 277 >gi|160881785|ref|YP_001560753.1| ribosomal protein L3 [Clostridium phytofermentans ISDg] gi|189042839|sp|A9KJJ4|RL3_CLOPH RecName: Full=50S ribosomal protein L3 gi|160430451|gb|ABX44014.1| ribosomal protein L3 [Clostridium phytofermentans ISDg] Length = 211 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 96/213 (45%), Positives = 126/213 (59%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N G PVTVL C V +T+D +GY AVQVG G+ + Sbjct: 1 MKKAILATKIGMTQIFNENGVLTPVTVLQAGPCAVTQVKTVDNDGYAAVQVGFGDIRETL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G F+ V+ K+ L EFR + D VG FT G +D TG + GKGF Sbjct: 61 VNKPQKGHFAKAGVANKRFLKEFRFENAAD-YTVGQEIKVDIFTAGDKIDATGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G PGRVFK K M G+MG +VTV+NLEVV Sbjct: 120 QGAIKRHGLSRGPMGHG-SKFHRHAGSNGAATTPGRVFKGKHMPGQMGNVKVTVQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +D LILVKG VPG KK + I+++++ KS Sbjct: 179 KIDVDNNLILVKGAVPGPKK-AMIMLKETVKSG 210 >gi|326490890|dbj|BAJ90112.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 313 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 105/209 (50%), Positives = 144/209 (68%), Gaps = 2/209 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GV+ K GM+ +++ G ++P+TVL +D+ V +T +K G+ A+Q+GAG+ K K++ Sbjct: 66 RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVCQVKTAEKEGFYALQLGAGQKKEKHL 125 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F S V K+KL EF V +D LLPVG+ S +F GQ VDV G+T GKGF+ Sbjct: 126 TKPEVGHFRSQGVPLKRKLKEFPVTED-ALLPVGTTISVRHFVPGQFVDVIGITKGKGFA 184 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F G+ A+HG S+SHRS GSTG R PGRVFKN+KM GRMGG + TVKN+ V Sbjct: 185 GGMKRHGFSGMPASHGASLSHRSIGSTGQRDSPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 244 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 +D R L+ +KG VPG + S++ V+DS Sbjct: 245 IDPARNLLYLKGQVPGPQ-GSFLFVKDSI 272 >gi|268609593|ref|ZP_06143320.1| 50S ribosomal protein L3 [Ruminococcus flavefaciens FD-1] Length = 210 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 90/212 (42%), Positives = 135/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +K+GMT +++ G+ +PVTV+ C VV +T++ +GY A+Q+G G+ KV+ Sbjct: 1 MQKGIIGKKIGMTQIFDEAGKVVPVTVVEAGPCVVVQKKTVENDGYAALQLGYGDVKVQR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KPM+G F +V+ KK L EFR+ +D D L VG + F VG +DV G + GKG+ Sbjct: 61 MNKPMKGHFDKADVACKKTLKEFRL-EDCDALNVGDIVKADTFAVGDAIDVVGTSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHN L+ THG HR GS G P R++K K MAG MG +VTV+NLE+V Sbjct: 120 AGPIKRHNQHRLKETHGTGPVHRQAGSMGACSSPSRIYKGKGMAGHMGAEQVTVQNLEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D + LI +KG +PG K + + DS K+ Sbjct: 180 KIDVENNLIAIKGAIPGP-KGGIVYIVDSVKA 210 >gi|148260939|ref|YP_001235066.1| 50S ribosomal protein L3 [Acidiphilium cryptum JF-5] gi|212288245|sp|A5FZW5|RL3_ACICJ RecName: Full=50S ribosomal protein L3 gi|146402620|gb|ABQ31147.1| LSU ribosomal protein L3P [Acidiphilium cryptum JF-5] Length = 227 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 124/218 (56%), Positives = 164/218 (75%), Gaps = 2/218 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+KLGMT ++ +G +PVTVLH+D+ +VV RT +++GY AVQ+G G AK KN Sbjct: 4 MRTGIIAKKLGMTRLFREDGTHVPVTVLHMDDVRVVAARTKERDGYAAVQLGFGHAKTKN 63 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+G F++ V P +L EFRV DD +L G V S ++FTVGQ VDV G++ GKGF Sbjct: 64 VTKPMKGHFAAAKVEPANRLVEFRV-ADDAVLEAGQVLSAAHFTVGQKVDVAGISKGKGF 122 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NF GL A+HGVSISHRS GSTG RQDPG+ FKNKKMAG +GG R+T NLEV Sbjct: 123 AGGMKRWNFRGLEASHGVSISHRSLGSTGNRQDPGKTFKNKKMAGHLGGERITTLNLEVA 182 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 ++D+ R LI++KG VPGA K+ ++LVRD+ K+A Sbjct: 183 AIDEARNLIMIKGAVPGA-KDGYVLVRDAVKTARPADA 219 >gi|120596989|ref|YP_961563.1| 50S ribosomal protein L3 [Shewanella sp. W3-18-1] gi|146294841|ref|YP_001185265.1| 50S ribosomal protein L3 [Shewanella putrefaciens CN-32] gi|166234594|sp|A4YBY3|RL3_SHEPC RecName: Full=50S ribosomal protein L3 gi|166234596|sp|A1REB4|RL3_SHESW RecName: Full=50S ribosomal protein L3 gi|120557082|gb|ABM23009.1| LSU ribosomal protein L3P [Shewanella sp. W3-18-1] gi|145566531|gb|ABP77466.1| LSU ribosomal protein L3P [Shewanella putrefaciens CN-32] gi|319424580|gb|ADV52654.1| 50S ribosomal protein L3 [Shewanella putrefaciens 200] Length = 212 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 92/213 (43%), Positives = 130/213 (61%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G IPVTV+ + +V +TL+ +GY A+QV G K Sbjct: 1 MAIGLIGRKVGMTRIFTEDGVSIPVTVIEVAGNRVTQVKTLETDGYRALQVTTGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G F+ V + L+E R++ + + + VG+ + F VDVTG + GKG Sbjct: 61 ITKPEAGHFAKSGVEAGRGLWEVRLEDGEGEGIEVGAELNVDIFADVAKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF THG S+SHRS+GS G Q PGRVFK KKM+G MG RVT +NL V Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLVV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LV+G VPGA I ++ + K+ Sbjct: 181 VRVDVERNLLLVRGAVPGATNGDLI-IKPAVKA 212 >gi|126666813|ref|ZP_01737790.1| Ribosomal protein L3 [Marinobacter sp. ELB17] gi|126628858|gb|EAZ99478.1| Ribosomal protein L3 [Marinobacter sp. ELB17] Length = 212 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 91/213 (42%), Positives = 133/213 (62%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ +G+ +PVTV+ +D+ ++ +TL+ +GY AVQ+ G + Sbjct: 1 MAIGIVGRKAGMTRIFTEDGQALPVTVIEVDSNRITQLKTLENDGYRAVQITVGSRRSSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + ++EFR+ + + L G + S F GQ VD TG + GKG Sbjct: 61 VNKSAAGHFAKAGVEAGRSVWEFRLADGEGEDLVAGGEITASVFEDGQAVDATGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG+MG +VTV+NL++ Sbjct: 121 FQGGVKRWNFAMQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQMGNAQVTVQNLKI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LV G VPGA + ++ + K+ Sbjct: 181 VRVDAERNLLLVSGAVPGATGGDVV-IKPAVKA 212 >gi|50122951|ref|YP_052118.1| 50S ribosomal protein L3 [Pectobacterium atrosepticum SCRI1043] gi|81826993|sp|Q6CZX0|RL3_ERWCT RecName: Full=50S ribosomal protein L3 gi|49613477|emb|CAG76928.1| 50S ribosomal subunit protein L3 [Pectobacterium atrosepticum SCRI1043] Length = 209 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 96/210 (45%), Positives = 134/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV AG K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTAGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRTLREFRLSEGEEFT-VGQSISVEIFADIKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|13470551|ref|NP_102120.1| 50S ribosomal protein L3 [Mesorhizobium loti MAFF303099] gi|42559683|sp|Q98N57|RL3_RHILO RecName: Full=50S ribosomal protein L3 gi|14021293|dbj|BAB47906.1| 50S ribosomal protein L3 [Mesorhizobium loti MAFF303099] Length = 237 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 131/219 (59%), Positives = 164/219 (74%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT +YN G +PVTVL ++NCQVV RT +KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAKKVGMTRIYNDAGEHVPVTVLQMENCQVVAQRTQEKNGYTAVQLGVGLAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F++ +V PK K+ EFRV D +++ VG+ + +F GQ VDVTG TIGKGF Sbjct: 61 TSKAMRGHFATASVEPKAKVAEFRVSAD-NMIDVGAEITVEHFVAGQKVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH+ GG RATHG S+SHR+HGSTG RQDPG+VFK KKMAG MG RVT +N+E+V Sbjct: 120 QGVIKRHHMGGGRATHGNSVSHRTHGSTGQRQDPGKVFKGKKMAGHMGDTRVTTQNVEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 S D RGLIL++G VPG+ K +WILVRD+ K A+ Sbjct: 180 STDADRGLILIRGAVPGS-KGAWILVRDAAKVALPANAP 217 >gi|15965109|ref|NP_385462.1| 50S ribosomal protein L3 [Sinorhizobium meliloti 1021] gi|307314359|ref|ZP_07593965.1| 50S ribosomal protein L3 [Sinorhizobium meliloti BL225C] gi|307322071|ref|ZP_07601447.1| 50S ribosomal protein L3 [Sinorhizobium meliloti AK83] gi|42559675|sp|Q92QH0|RL3_RHIME RecName: Full=50S ribosomal protein L3 gi|15074289|emb|CAC45935.1| Probable 50S ribosomal protein L3 [Sinorhizobium meliloti 1021] gi|306892253|gb|EFN23063.1| 50S ribosomal protein L3 [Sinorhizobium meliloti AK83] gi|306899057|gb|EFN29699.1| 50S ribosomal protein L3 [Sinorhizobium meliloti BL225C] Length = 228 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 144/213 (67%), Positives = 170/213 (79%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G IPVTVL L+NCQVV HRT +KNGY AVQ+GAG +KVKN Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHIPVTVLRLENCQVVSHRTEEKNGYTAVQLGAGRSKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 K MRG F++ +V PK KL EFRV D +L+ +G+ + +F GQLVDVTG TIGKGF Sbjct: 61 TPKAMRGHFAAASVEPKAKLVEFRVSAD-NLIDIGAELTAGHFVAGQLVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GA+KRHNFGGLRATHGVS+SHRSHGSTG QDPGRV+K K+MAG MG RVT +NLEVV Sbjct: 120 AGAIKRHNFGGLRATHGVSVSHRSHGSTGSNQDPGRVWKGKRMAGHMGQTRVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 S D+ RGLILVKG VPG+ K SWI+VRD+ KS Sbjct: 180 STDEDRGLILVKGAVPGS-KGSWIVVRDAIKSG 211 >gi|237786395|ref|YP_002907100.1| 50S ribosomal protein L3 [Corynebacterium kroppenstedtii DSM 44385] gi|259647406|sp|C4LL52|RL3_CORK4 RecName: Full=50S ribosomal protein L3 gi|237759307|gb|ACR18557.1| 50S ribosomal protein L3 [Corynebacterium kroppenstedtii DSM 44385] Length = 219 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 87/214 (40%), Positives = 122/214 (57%), Gaps = 1/214 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ + R +PVTV+ C V RT +K+GY A+Q+ G+ + V+ Sbjct: 7 KGILGTKLGMTQVFDEDNRVVPVTVVEAGPCVVTQIRTEEKDGYSAIQIAYGDIDPRKVN 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V+P++ + E R+ VG + F + VDVTG T G GF+G Sbjct: 67 KPQSGHFAKAGVTPRRYVTEIRMDDVLSDYEVGQDVTVELFGDVKFVDVTGTTRGHGFAG 126 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRH F G A HG +HR G G PGRVFK +MAGRMG NRVT +NL++ V Sbjct: 127 AMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGNNRVTTQNLKLFKV 186 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D L+L+KG VPG + + V+ + K + Sbjct: 187 DADSNLLLIKGAVPG-IRGGLVTVKTAVKGGAHA 219 >gi|271502246|ref|YP_003335272.1| 50S ribosomal protein L3 [Dickeya dadantii Ech586] gi|270345801|gb|ACZ78566.1| 50S ribosomal protein L3 [Dickeya dadantii Ech586] Length = 209 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 98/210 (46%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ EG IPVTV+ ++ +V +TL+ +GY AVQV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEEGVSIPVTVIEIEANRVTQVKTLENDGYRAVQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L EFR+ D + VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRVLREFRL-ADSEEFAVGQDISVEVFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|269128516|ref|YP_003301886.1| 50S ribosomal protein L3 [Thermomonospora curvata DSM 43183] gi|268313474|gb|ACY99848.1| ribosomal protein L3 [Thermomonospora curvata DSM 43183] Length = 216 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 101/212 (47%), Positives = 131/212 (61%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R GV+ KLGMT V++ EGR +PVTV+ C V RT +K+GY AVQ+G G+ + V Sbjct: 5 RKGVLGEKLGMTQVFDDEGRIVPVTVVQAGPCVVTQIRTPEKDGYSAVQIGYGQVNPRKV 64 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F+ V+P++ L E R D +G + F G+ VDVTG T GKG + Sbjct: 65 NKPRMGHFAKAGVTPRRYLTEVRTD-DASEYTLGQEITVEIFKAGEKVDVTGTTKGKGTA 123 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH FGGL A+HG HRS GS G PGRVFK +MAGRMG R TV+NL + + Sbjct: 124 GVMKRHGFGGLGASHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNVRKTVQNLTIHA 183 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD +GL+L+KG +PG +LVRD+ K A Sbjct: 184 VDPDKGLLLIKGAIPGPN-GGLVLVRDAVKGA 214 >gi|310659502|ref|YP_003937223.1| 50S ribosomal protein L3 [Clostridium sticklandii DSM 519] gi|308826280|emb|CBH22318.1| 50S ribosomal subunit protein L3 [Clostridium sticklandii] Length = 208 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 94/210 (44%), Positives = 123/210 (58%), Gaps = 3/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 V+ RKLGMT V+ +GR +PVTV+ V + + +GY AVQV GE K K V+ Sbjct: 2 KAVLGRKLGMTQVFAEDGRLVPVTVIEAGPMVVTQIKNKETDGYEAVQVAFGEVKEKRVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+RG F+ V KK + EF+V +D + F G+ VD G + GKGF G Sbjct: 62 KPLRGHFAKAGVGFKKFVREFKV-EDLSAYSLAQEIKVDVFEAGEKVDAIGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHN THG S HR GS G DP RVFK KK+AG MG RVT++NLEVV V Sbjct: 121 PIKRHNQSRGPMTHG-SRYHRGPGSMGAASDPSRVFKGKKLAGHMGAERVTIQNLEVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D ++ LIL+KG VPG KK ++++ + K Sbjct: 180 DVEKNLILIKGAVPGPKKG-LVVIKKAIKG 208 >gi|253991688|ref|YP_003043044.1| 50S ribosomal protein L3 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253783138|emb|CAQ86303.1| 50s ribosomal protein l3 [Photorhabdus asymbiotica] Length = 209 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 94/210 (44%), Positives = 134/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++N +V + L+ +GY A+QV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKDLNNDGYRAIQVTTGSKKASRVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRILREFRLSEGEE-YAVGQSISVEIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF A+HG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDASHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSNLIVKPAVKA 209 >gi|311693271|gb|ADP96144.1| 50S ribosomal protein L3 [marine bacterium HP15] Length = 212 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 91/213 (42%), Positives = 132/213 (61%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ +G+ +PVTV+ ++ ++ +TL+ +GY AVQV G + Sbjct: 1 MAIGVVGRKAGMTRIFTEDGQALPVTVIEVEPNRITQLKTLESDGYRAVQVTVGTRRSSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + ++EFR+ + + L G + S F GQ+VD G + GKG Sbjct: 61 VTKSEAGHFAKAGVEAGRGMWEFRLADGEGEDLAAGGEITASVFEDGQVVDAIGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG+MG +VTV+NL++ Sbjct: 121 FQGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQMGNAQVTVQNLKI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LV G VPGA + ++ + K+ Sbjct: 181 VRVDAERNLLLVSGAVPGATGGDVV-IKPAVKA 212 >gi|28212175|ref|NP_783119.1| 50S ribosomal protein L3 [Clostridium tetani E88] gi|42559625|sp|Q890N9|RL3_CLOTE RecName: Full=50S ribosomal protein L3 gi|28204619|gb|AAO37056.1| LSU ribosomal protein L3P [Clostridium tetani E88] Length = 209 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 86/212 (40%), Positives = 127/212 (59%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ RKLGMT +++ R +PVTV+ C VV ++++K+GY A+QVG GE + K Sbjct: 1 MKKAIIGRKLGMTQIFDENNRVVPVTVVEAGPCTVVQKKSVEKDGYEAIQVGYGEIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F V + L EF+++ VG F G+ +DVTG + GKG+ Sbjct: 61 VNKPLKGHFEKAGVGLSRMLREFKLEN-VSEYQVGQEIKVDIFEAGEKIDVTGTSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR N +HG S HR+ GS G P R FKNK+MAG MG + TV NLEVV Sbjct: 120 QGIIKRWNAHRGPMSHG-SKFHRAVGSMGAASYPARTFKNKRMAGHMGNVKSTVLNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 ++ LIL+KG +PG K ++++R+S K+ Sbjct: 179 KTIPEKNLILIKGGIPGPNKG-YVIIRNSIKA 209 >gi|150396207|ref|YP_001326674.1| 50S ribosomal protein L3 [Sinorhizobium medicae WSM419] gi|166234597|sp|A6U859|RL3_SINMW RecName: Full=50S ribosomal protein L3 gi|150027722|gb|ABR59839.1| ribosomal protein L3 [Sinorhizobium medicae WSM419] Length = 228 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 144/213 (67%), Positives = 169/213 (79%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G IPVTVL L+NCQVV RT +KNGY AVQ+GAG +KVKN Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHIPVTVLRLENCQVVAQRTEEKNGYTAVQLGAGRSKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 K MRG F++ +V PK KL EFRV D +L+ +GS + +F GQLVDVTG TIGKGF Sbjct: 61 TPKAMRGHFAAASVEPKAKLVEFRVSAD-NLIDIGSELTAGHFVAGQLVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GA+KRHNFGGLRATHGVS+SHRSHGSTG QDPGRV+K K+MAG MG RVT +NLEVV Sbjct: 120 AGAIKRHNFGGLRATHGVSVSHRSHGSTGSNQDPGRVWKGKRMAGHMGQTRVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 S D+ RGLILVKG VPG+ K SWI+VRD+ KS Sbjct: 180 STDEDRGLILVKGAVPGS-KGSWIVVRDAIKSG 211 >gi|121601833|ref|YP_988997.1| 50S ribosomal protein L3 [Bartonella bacilliformis KC583] gi|121602668|ref|YP_988967.1| 50S ribosomal protein L3 [Bartonella bacilliformis KC583] gi|212288247|sp|A1USL4|RL3_BARBK RecName: Full=50S ribosomal protein L3 gi|120614010|gb|ABM44611.1| ribosomal protein L3 [Bartonella bacilliformis KC583] gi|120614845|gb|ABM45446.1| ribosomal protein L3 [Bartonella bacilliformis KC583] Length = 246 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 130/219 (59%), Positives = 161/219 (73%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+ +KLGMT +YN G R+PVTVL L+NCQV+ RT++KNGY AVQ+G G AK + Sbjct: 1 MRSGVITQKLGMTSIYNDTGERVPVTVLRLENCQVIAQRTVEKNGYTAVQLGVGLAKFEK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK +RG FS V PK K+ EFRV D +LL VG+ + +F GQ VDVTG +IGKGF Sbjct: 61 TSKALRGHFSKALVEPKAKIVEFRVSSD-NLLDVGTEITVEHFVPGQRVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNVEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 S+D RGLILV+G V G+ K +W+LVRD+ K + Sbjct: 180 SIDVDRGLILVRGAVSGS-KGAWVLVRDAVKKRLPDNAP 217 >gi|319408765|emb|CBI82422.1| 50S ribosomal protein L3 [Bartonella schoenbuchensis R1] Length = 246 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 133/215 (61%), Positives = 163/215 (75%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT +YN G +PVTVL L+NCQV+ RT++KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRIYNEAGEHVPVTVLRLENCQVIAQRTVEKNGYTAVQLGVGFAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS+ +RG F+ V PK K+ EFRV D +LL VG+ + +F GQ VDVTG +IGKGF Sbjct: 61 VSRALRGHFAKAVVEPKAKVAEFRVSPD-NLLDVGTEITVEHFIPGQRVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNIEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 S D RGLILV+G V G+ K +WILVRD+ K + Sbjct: 180 STDIDRGLILVRGAVSGS-KGAWILVRDAVKKRLP 213 >gi|240167703|ref|ZP_04746362.1| 50S ribosomal protein L3 [Mycobacterium kansasii ATCC 12478] Length = 217 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 91/214 (42%), Positives = 125/214 (58%), Gaps = 3/214 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ R +PVTV+ V RT +++GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP+ G +++ V+P++ L E R+ D VG + F G VDVTG + GKG Sbjct: 63 TKPLTGQYTAAGVNPRRHLAELRLDDPDAVAEYEVGQELTAEIFADGSYVDVTGTSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKRH F G A HG HR GS G P RVFK +MAGRMG +RVTV+NL V Sbjct: 123 FAGTMKRHGFRGQGAAHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + G++L+KG VPG + ++VR + K Sbjct: 183 HKVDAENGVLLIKGAVPG-RTGGLVMVRSAIKRG 215 >gi|254517470|ref|ZP_05129526.1| ribosomal protein L3 [Clostridium sp. 7_2_43FAA] gi|226911219|gb|EEH96420.1| ribosomal protein L3 [Clostridium sp. 7_2_43FAA] Length = 209 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 89/212 (41%), Positives = 130/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT +++ G+ +PVTV+ C VV +T++K+GY A+QVG G+ + K Sbjct: 1 MKKAILGKKIGMTQIFDANGKVVPVTVVEAGPCVVVQKKTIEKDGYEAIQVGFGDVREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G ++ VS K+KL EFR+ +D VG F G +DV+G++ GKGF Sbjct: 61 VNKPKKGHYAKAGVSLKRKLKEFRL-EDCSAYEVGQEIKADLFEAGDKIDVSGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR N THG S HR+ GS G DP R FKNK M G MG TV NLEVV Sbjct: 120 QGVIKRWNANRGPMTHG-SKFHRAVGSMGASSDPSRTFKNKNMPGHMGAVNTTVLNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ LIL+KG +PG K + + +R++ K+ Sbjct: 179 KVIAEKNLILIKGGIPGPNKGTVV-IRNAVKA 209 >gi|322807806|emb|CBZ05381.1| LSU ribosomal protein L3p (L3e) [Clostridium botulinum H04402 065] Length = 209 Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 85/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +KLGMT ++N G+ IPVTV+ C V+ +T++K+GY A+QV G+ + K Sbjct: 1 MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP++G F+ VS K+ + EF++ +D + L +G F G+ VD++G++ GKGF Sbjct: 61 RNKPVKGHFAKAGVSVKRHIKEFKL-EDSNSLKIGQEIKADIFEAGERVDISGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G ++R N +HG S HR+ GS G DP R FKNK+M G MG TV NLEVV Sbjct: 120 QGTIRRWNAHRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + ++ LIL+KG VPG K + +R++ K+ Sbjct: 179 RIIPEKNLILIKGGVPGPNKG-LVQIRNTVKA 209 >gi|330993846|ref|ZP_08317778.1| 50S ribosomal protein L3 [Gluconacetobacter sp. SXCC-1] gi|329759114|gb|EGG75626.1| 50S ribosomal protein L3 [Gluconacetobacter sp. SXCC-1] Length = 223 Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 128/215 (59%), Positives = 162/215 (75%), Gaps = 2/215 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++A+KLGMT ++ +G +PVTVL +D+ QVV RT +++GY AVQ+GAG+AKVKNVSKP Sbjct: 1 MIAKKLGMTRLFKEDGTHVPVTVLQVDDLQVVDVRTTERDGYTAVQLGAGKAKVKNVSKP 60 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 RG F+ V PKKKL EFRV DD +L VG+ S ++F GQ VDVTG + GKGF+GAM Sbjct: 61 NRGHFAKAKVEPKKKLAEFRV-ADDSVLEVGASLSAAHFVAGQKVDVTGTSKGKGFAGAM 119 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR NF GL ATHGVSISHRSHGSTG RQDPG+VFKNKKMAG +G RVT NLE+ +VD Sbjct: 120 KRWNFAGLEATHGVSISHRSHGSTGNRQDPGKVFKNKKMAGHLGSERVTTLNLEIAAVDA 179 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 ++ LI+++G VPG KN +LVRD+ K A + + Sbjct: 180 EKNLIMIRGSVPGG-KNETVLVRDAIKKARHAEAP 213 >gi|261346935|ref|ZP_05974579.1| 50S ribosomal protein L3 [Providencia rustigianii DSM 4541] gi|282565000|gb|EFB70535.1| 50S ribosomal protein L3 [Providencia rustigianii DSM 4541] Length = 209 Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 94/210 (44%), Positives = 132/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++N +V +T + +GY A+QV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKTAETDGYNAIQVTTGSKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L EFR ++ + G S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRILREFRTEEGTEF-KAGESISVEIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSNLIVKPAVKA 209 >gi|170757219|ref|YP_001783121.1| 50S ribosomal protein L3 [Clostridium botulinum B1 str. Okra] gi|226725153|sp|B1IGF4|RL3_CLOBK RecName: Full=50S ribosomal protein L3 gi|169122431|gb|ACA46267.1| 50S ribosomal protein L3 [Clostridium botulinum B1 str. Okra] Length = 209 Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 85/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +KLGMT ++N G+ IPVTV+ C V+ +T++K+GY A+QV G+ + K Sbjct: 1 MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP++G F+ VS K+ + EF++ +D + L +G F G+ VD++G++ GKGF Sbjct: 61 RNKPVKGHFAKAGVSVKRHIKEFKL-EDSNSLEIGQEIKADVFEAGERVDISGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G ++R N +HG S HR+ GS G DP R FKNK+M G MG TV NLEVV Sbjct: 120 QGTIRRWNAHRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + ++ LIL+KG VPG K + +R++ K+ Sbjct: 179 KIIPEKNLILIKGGVPGPNKG-LVQIRNTVKA 209 >gi|296131836|ref|YP_003639083.1| 50S ribosomal protein L3 [Thermincola sp. JR] gi|296030414|gb|ADG81182.1| 50S ribosomal protein L3 [Thermincola potens JR] Length = 209 Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 88/212 (41%), Positives = 130/212 (61%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++N +G +PVTV+ C VV +T++ +GY ++Q+G GE + Sbjct: 1 MSKGILGKKIGMTQIFNEQGEVLPVTVVEAGPCVVVQKKTVETDGYNSIQLGFGEKRESL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP++G F+ V P K L EF+V DD +G F G+ VDV G + GKGF Sbjct: 61 LTKPLKGHFAKAGVKPMKYLKEFKVVNIDD-YQLGQEIKVDIFEAGERVDVEGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR+NF HG S SHR GS G + P RVFK K G +G +VT++NLE+V Sbjct: 120 AGTIKRYNFQRGPMAHG-SKSHRRVGSAGAKG-PARVFKGTKRPGHLGAEKVTIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG +PG K S + V+ S K+ Sbjct: 178 KVDPERNLLLIKGAIPGP-KGSLVAVKSSVKA 208 >gi|239623347|ref|ZP_04666378.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239522313|gb|EEQ62179.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 226 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 90/211 (42%), Positives = 122/211 (57%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N G +PVTVL C V +T + +GY AVQVG + + K Sbjct: 16 MKKAILATKVGMTQIFNENGALVPVTVLQAGPCVVTQVKTAENDGYKAVQVGFVDKREKL 75 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKP+RG F VS K+ + EF+ + ++ V F G +D T ++ GKGF Sbjct: 76 VSKPLRGHFDKAGVSYKRYVREFKFENAEE-YSVKDEIKADIFAAGDKIDATAISKGKGF 134 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR+ HG S HR GS G PGRVFK K M G MG ++TV+NLEVV Sbjct: 135 QGAIKRYGQHRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGHMGSKKITVQNLEVV 193 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD LILVKG VPG KK S + ++++ K Sbjct: 194 KVDTDNNLILVKGAVPGPKK-SLVTIKETVK 223 >gi|323164885|gb|EFZ50676.1| ribosomal L3 family protein [Shigella sonnei 53G] Length = 209 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFAEVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|114704484|ref|ZP_01437392.1| 50S ribosomal protein L3 [Fulvimarina pelagi HTCC2506] gi|114539269|gb|EAU42389.1| 50S ribosomal protein L3 [Fulvimarina pelagi HTCC2506] Length = 241 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 133/219 (60%), Positives = 167/219 (76%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT +Y G +PVTVL ++N QVV RT DKNGY AVQVGAG AKVKN Sbjct: 1 MRSGVIAQKVGMTRIYTDAGEHVPVTVLKVENLQVVGQRTQDKNGYTAVQVGAGLAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ V PK+KL EFRV +D +++ +G+ + +F GQ+VDVTG +IGKGF Sbjct: 61 TSKAMRGVFAQAKVEPKRKLVEFRVTED-NMIDIGAEITADHFVEGQMVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGG+RATHGVSISHR+HGSTG QDPG+VFK KKMAG MG RVT +NL++V Sbjct: 120 AGAMKRHNFGGMRATHGVSISHRAHGSTGQNQDPGKVFKGKKMAGHMGQERVTTQNLQIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 D ++GLILV+G VPGA K WI +RD+ K+++ Sbjct: 180 RTDAEKGLILVRGAVPGA-KGGWIEIRDAVKASLPDNAP 217 >gi|294055221|ref|YP_003548879.1| 50S ribosomal protein L3 [Coraliomargarita akajimensis DSM 45221] gi|293614554|gb|ADE54709.1| 50S ribosomal protein L3 [Coraliomargarita akajimensis DSM 45221] Length = 214 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 90/212 (42%), Positives = 122/212 (57%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT V++ R +PVTV+ C V +T +K+GY AVQ+G K Sbjct: 1 MKVALLGKKIGMTQVFDENNRLVPVTVIEAGPCPVTQVKTSEKDGYSAVQIGYRAQKEHR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SK G F V P +L EFRV + + L VG V + F GQ +DV G T G+GF Sbjct: 61 LSKAALGHFKKAGVEPLAELREFRVAAEGE-LNVGDVLTVEKFEAGQKIDVIGTTKGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR F G A+HG S+ HR GS G Q PG V K KKM G MG + TV+NL VV Sbjct: 120 QGVVKRWGFHGGPASHG-SMFHRRGGSYGMCQWPGHVIKGKKMPGHMGDKQRTVQNLTVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V + LILVKG +PG+ + + VR + K+ Sbjct: 179 KVLADKNLILVKGSIPGS-RGGLVTVRTAIKN 209 >gi|262203624|ref|YP_003274832.1| 50S ribosomal protein L3 [Gordonia bronchialis DSM 43247] gi|262086971|gb|ACY22939.1| 50S ribosomal protein L3 [Gordonia bronchialis DSM 43247] Length = 219 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 94/215 (43%), Positives = 128/215 (59%), Gaps = 2/215 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 G++ KLGMT V++ R +PVTV+ + RT D++GY AVQ+ G + V Sbjct: 7 TKGILGTKLGMTQVFDENNRVVPVTVIQAGPNVITQLRTADRDGYTAVQLAYGAIDPRKV 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G +S V+P++ L E RV D VG + F G LVDVTG + GKGF+ Sbjct: 67 TKPVAGQYSKAGVTPRRHLAEIRV-NDVSEFEVGQELTAEVFAEGSLVDVTGTSKGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F GL A+HG HR+ GS G PGRVFK +MAGRMG ++VT +NL V Sbjct: 126 GVMKRHGFSGLGASHGAHRVHRAPGSIGGCATPGRVFKGMRMAGRMGNDKVTTQNLTVHK 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 VD + GL+L+KG +PG +K ++VRD+ K Sbjct: 186 VDAEAGLLLIKGAIPG-RKGGIVVVRDAVKGGAKA 219 >gi|218187896|gb|EEC70323.1| hypothetical protein OsI_01192 [Oryza sativa Indica Group] Length = 319 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 102/209 (48%), Positives = 145/209 (69%), Gaps = 2/209 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GV+ K GM+ +++ G ++P+TVL +D+ V +T +K G+ A+Q+GAG+ K K++ Sbjct: 74 RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVCQVKTAEKEGFFALQLGAGQKKEKHL 133 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F + V K+KL EF V +D L+P+G+ + +F GQ VDVTG+T GKGF+ Sbjct: 134 TKPEVGHFRAQGVPLKRKLREFPVTED-ALIPLGTTITVRHFVPGQFVDVTGITKGKGFA 192 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F G+ A+HG S+SHRS GSTG R PGRVFKN+KM GRMGG + TVKN+ V Sbjct: 193 GGMKRHGFSGMPASHGASLSHRSIGSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 252 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 +D R L+ +KG VPG + S++ V+DS Sbjct: 253 IDPARNLLYLKGQVPGPQ-GSFVFVKDSI 280 >gi|115435682|ref|NP_001042599.1| Os01g0251100 [Oryza sativa Japonica Group] gi|7106521|dbj|BAA92206.1| putative ribosomal protein L3 [Oryza sativa Japonica Group] gi|113532130|dbj|BAF04513.1| Os01g0251100 [Oryza sativa Japonica Group] gi|215678787|dbj|BAG95224.1| unnamed protein product [Oryza sativa Japonica Group] gi|215707174|dbj|BAG93634.1| unnamed protein product [Oryza sativa Japonica Group] gi|222618109|gb|EEE54241.1| hypothetical protein OsJ_01115 [Oryza sativa Japonica Group] Length = 319 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 102/209 (48%), Positives = 145/209 (69%), Gaps = 2/209 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GV+ K GM+ +++ G ++P+TVL +D+ V +T +K G+ A+Q+GAG+ K K++ Sbjct: 74 RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVCQVKTAEKEGFFALQLGAGQKKEKHL 133 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F + V K+KL EF V +D L+P+G+ + +F GQ VDVTG+T GKGF+ Sbjct: 134 TKPEVGHFRAQGVPLKRKLREFPVTED-ALIPLGTTITVRHFVPGQFVDVTGITKGKGFA 192 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F G+ A+HG S+SHRS GSTG R PGRVFKN+KM GRMGG + TVKN+ V Sbjct: 193 GGMKRHGFSGMPASHGASLSHRSIGSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 252 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 +D R L+ +KG VPG + S++ V+DS Sbjct: 253 IDPARNLLYLKGQVPGPQ-GSFVFVKDSI 280 >gi|326404337|ref|YP_004284419.1| 50S ribosomal protein L3 [Acidiphilium multivorum AIU301] gi|325051199|dbj|BAJ81537.1| 50S ribosomal protein L3 [Acidiphilium multivorum AIU301] Length = 225 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 123/218 (56%), Positives = 164/218 (75%), Gaps = 2/218 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+KLGMT ++ +G +PVTVLH+D+ +VV RT +++GY AVQ+G G AK KN Sbjct: 2 MRTGIIAKKLGMTRLFREDGTHVPVTVLHMDDVRVVAARTKERDGYAAVQLGFGHAKTKN 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+G F++ V P +L EFRV DD +L G V S ++FTVGQ VDV G++ GKGF Sbjct: 62 VTKPMKGHFAAAKVEPANRLVEFRV-ADDAVLEAGQVLSAAHFTVGQKVDVAGISKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NF GL A+HGVSISHRS GSTG RQDPG+ F+NKKMAG +GG R+T NLEV Sbjct: 121 AGGMKRWNFRGLEASHGVSISHRSLGSTGNRQDPGKTFRNKKMAGHLGGERITTLNLEVA 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 ++D+ R LI++KG VPGA K+ ++LVRD+ K+A Sbjct: 181 AIDEARNLIMIKGAVPGA-KDGYVLVRDAVKTARPADA 217 >gi|293393311|ref|ZP_06637625.1| 50S ribosomal protein L3 [Serratia odorifera DSM 4582] gi|291424221|gb|EFE97436.1| 50S ribosomal protein L3 [Serratia odorifera DSM 4582] Length = 209 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 94/210 (44%), Positives = 131/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + LD +GY A+QV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLDNDGYRAIQVTTGSKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+++ + G S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLEEGQEF-AAGQEISVEIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG +G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA + I V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGATGGNLI-VKPAVKA 209 >gi|71905961|ref|YP_283548.1| 50S ribosomal protein L3 [Dechloromonas aromatica RCB] gi|109893424|sp|Q47JA3|RL3_DECAR RecName: Full=50S ribosomal protein L3 gi|71845582|gb|AAZ45078.1| LSU ribosomal protein L3P [Dechloromonas aromatica RCB] Length = 212 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 96/213 (45%), Positives = 132/213 (61%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTVL + N +V +T + +GY A+QV G+ + Sbjct: 1 MSLGLVGRKVGMTRIFAEDGASIPVTVLDVSNNRVTQVKTPEIDGYAAIQVAFGKRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 VSKP+ G + V L EF+++ D G + + F GQ VDVTG +IGKG Sbjct: 61 VSKPLAGHLAKAGVEAGHVLKEFQIEADQLASFKAGDQVAVTIFAEGQKVDVTGTSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KRHNF RA+HG S+SH + GS G QDPGRVF K+MAG +G + T++ L + Sbjct: 121 FQGGIKRHNFSSNRASHGNSLSHNAPGSIGMAQDPGRVFPGKRMAGHLGDVQSTMQGLTI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD R L+LVKG VPGA K S ++VR + K+ Sbjct: 181 VRVDADRQLLLVKGAVPGA-KGSDVVVRPAVKA 212 >gi|255526578|ref|ZP_05393485.1| ribosomal protein L3 [Clostridium carboxidivorans P7] gi|296187266|ref|ZP_06855662.1| 50S ribosomal protein L3 [Clostridium carboxidivorans P7] gi|255509686|gb|EET86019.1| ribosomal protein L3 [Clostridium carboxidivorans P7] gi|296048137|gb|EFG87575.1| 50S ribosomal protein L3 [Clostridium carboxidivorans P7] Length = 209 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 83/212 (39%), Positives = 127/212 (59%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +KLGMT +++ G+ +PVTV+ C V +T +K+GY A+Q+G + + K Sbjct: 1 MKKAILGKKLGMTQIFDENGKIVPVTVIEAGPCVVFQKKTTEKDGYEAIQLGFDDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+G F+ + K+ + E RV +D VG F G+ +DV+G++ GKGF Sbjct: 61 VNKPMKGHFAKAGAALKRFVKEIRV-EDISAYEVGQEIKADVFAAGEKIDVSGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR N +HG S HR+ GS G DP R FKNKK+ G MG TV NLEV Sbjct: 120 QGTIKRWNAQRGPMSHG-SKFHRAPGSMGASSDPSRTFKNKKLPGHMGNVNTTVLNLEVA 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ +IL+KG VPG K ++++R++ K+ Sbjct: 179 KVMPEKNIILIKGGVPGPNKG-FVVIRNTVKA 209 >gi|15803847|ref|NP_289881.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 EDL933] gi|15833439|ref|NP_312212.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 str. Sakai] gi|16131199|ref|NP_417779.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12 substr. MG1655] gi|24114598|ref|NP_709108.1| 50S ribosomal protein L3 [Shigella flexneri 2a str. 301] gi|26249915|ref|NP_755955.1| 50S ribosomal protein L3 [Escherichia coli CFT073] gi|30065379|ref|NP_839550.1| 50S ribosomal protein L3 [Shigella flexneri 2a str. 2457T] gi|82545683|ref|YP_409630.1| 50S ribosomal protein L3 [Shigella boydii Sb227] gi|82778616|ref|YP_404965.1| 50S ribosomal protein L3 [Shigella dysenteriae Sd197] gi|89110690|ref|AP_004470.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12 substr. W3110] gi|91212757|ref|YP_542743.1| 50S ribosomal protein L3 [Escherichia coli UTI89] gi|110643559|ref|YP_671289.1| 50S ribosomal protein L3 [Escherichia coli 536] gi|110807167|ref|YP_690687.1| 50S ribosomal protein L3 [Shigella flexneri 5 str. 8401] gi|117625598|ref|YP_858921.1| 50S ribosomal protein L3 [Escherichia coli APEC O1] gi|157156606|ref|YP_001464788.1| 50S ribosomal protein L3 [Escherichia coli E24377A] gi|157162794|ref|YP_001460112.1| 50S ribosomal protein L3 [Escherichia coli HS] gi|168752799|ref|ZP_02777821.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4113] gi|168753088|ref|ZP_02778095.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4401] gi|168769186|ref|ZP_02794193.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4486] gi|168785139|ref|ZP_02810146.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC869] gi|170018444|ref|YP_001723398.1| 50S ribosomal protein L3 [Escherichia coli ATCC 8739] gi|170082839|ref|YP_001732159.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12 substr. DH10B] gi|170680319|ref|YP_001745582.1| 50S ribosomal protein L3 [Escherichia coli SMS-3-5] gi|187733677|ref|YP_001882004.1| 50S ribosomal protein L3 [Shigella boydii CDC 3083-94] gi|188495143|ref|ZP_03002413.1| ribosomal protein L3 [Escherichia coli 53638] gi|191171516|ref|ZP_03033064.1| ribosomal protein L3 [Escherichia coli F11] gi|195939869|ref|ZP_03085251.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 str. EC4024] gi|208806486|ref|ZP_03248823.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4206] gi|208812110|ref|ZP_03253439.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4045] gi|208818332|ref|ZP_03258652.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4042] gi|209398982|ref|YP_002272776.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4115] gi|209920786|ref|YP_002294870.1| 50S ribosomal protein L3 [Escherichia coli SE11] gi|215488620|ref|YP_002331051.1| 50S ribosomal protein L3 [Escherichia coli O127:H6 str. E2348/69] gi|217325713|ref|ZP_03441797.1| ribosomal protein L3 [Escherichia coli O157:H7 str. TW14588] gi|218550595|ref|YP_002384386.1| 50S ribosomal protein L3 [Escherichia fergusonii ATCC 35469] gi|218555877|ref|YP_002388790.1| 50S ribosomal protein L3 [Escherichia coli IAI1] gi|218560381|ref|YP_002393294.1| 50S ribosomal protein L3 [Escherichia coli S88] gi|218691606|ref|YP_002399818.1| 50S ribosomal protein L3 [Escherichia coli ED1a] gi|218697012|ref|YP_002404679.1| 50S ribosomal protein L3 [Escherichia coli 55989] gi|218702082|ref|YP_002409711.1| 50S ribosomal protein L3 [Escherichia coli IAI39] gi|218706927|ref|YP_002414446.1| 50S ribosomal protein L3 [Escherichia coli UMN026] gi|227883451|ref|ZP_04001256.1| 50S ribosomal protein L3 [Escherichia coli 83972] gi|237703050|ref|ZP_04533531.1| ribosomal protein L3 [Escherichia sp. 3_2_53FAA] gi|238902411|ref|YP_002928207.1| 50S ribosomal subunit protein L3 [Escherichia coli BW2952] gi|253771856|ref|YP_003034687.1| 50S ribosomal protein L3 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254038481|ref|ZP_04872537.1| 50S ribosomal protein L3 [Escherichia sp. 1_1_43] gi|254163248|ref|YP_003046356.1| 50S ribosomal protein L3 [Escherichia coli B str. REL606] gi|254795257|ref|YP_003080094.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 str. TW14359] gi|256020679|ref|ZP_05434544.1| 50S ribosomal protein L3 [Shigella sp. D9] gi|260846118|ref|YP_003223896.1| 50S ribosomal subunit protein L3 [Escherichia coli O103:H2 str. 12009] gi|260857441|ref|YP_003231332.1| 50S ribosomal subunit protein L3 [Escherichia coli O26:H11 str. 11368] gi|260870063|ref|YP_003236465.1| 50S ribosomal subunit protein L3 [Escherichia coli O111:H- str. 11128] gi|261224625|ref|ZP_05938906.1| 50S ribosomal subunit protein L3 [Escherichia coli O157:H7 str. FRIK2000] gi|261254481|ref|ZP_05947014.1| 50S ribosomal subunit protein L3 [Escherichia coli O157:H7 str. FRIK966] gi|291284678|ref|YP_003501496.1| 50S ribosomal protein L3 [Escherichia coli O55:H7 str. CB9615] gi|293406917|ref|ZP_06650841.1| 50S ribosomal protein L3 [Escherichia coli FVEC1412] gi|293412739|ref|ZP_06655407.1| 50S ribosomal protein L3 [Escherichia coli B354] gi|293416737|ref|ZP_06659374.1| 50S ribosomal protein L3 [Escherichia coli B185] gi|293453638|ref|ZP_06664057.1| 50S ribosomal protein L3 [Escherichia coli B088] gi|297516596|ref|ZP_06934982.1| 50S ribosomal protein L3 [Escherichia coli OP50] gi|298382657|ref|ZP_06992252.1| 50S ribosomal protein L3 [Escherichia coli FVEC1302] gi|300815470|ref|ZP_07095695.1| 50S ribosomal protein L3 [Escherichia coli MS 107-1] gi|300822877|ref|ZP_07103013.1| 50S ribosomal protein L3 [Escherichia coli MS 119-7] gi|300896668|ref|ZP_07115184.1| 50S ribosomal protein L3 [Escherichia coli MS 198-1] gi|300903568|ref|ZP_07121490.1| 50S ribosomal protein L3 [Escherichia coli MS 84-1] gi|300918293|ref|ZP_07134897.1| 50S ribosomal protein L3 [Escherichia coli MS 115-1] gi|300921871|ref|ZP_07138027.1| 50S ribosomal protein L3 [Escherichia coli MS 182-1] gi|300932213|ref|ZP_07147492.1| 50S ribosomal protein L3 [Escherichia coli MS 187-1] gi|300935318|ref|ZP_07150328.1| 50S ribosomal protein L3 [Escherichia coli MS 21-1] gi|300946542|ref|ZP_07160807.1| 50S ribosomal protein L3 [Escherichia coli MS 116-1] gi|300954805|ref|ZP_07167232.1| 50S ribosomal protein L3 [Escherichia coli MS 175-1] gi|300973999|ref|ZP_07172406.1| 50S ribosomal protein L3 [Escherichia coli MS 200-1] gi|300979891|ref|ZP_07174767.1| 50S ribosomal protein L3 [Escherichia coli MS 45-1] gi|301018816|ref|ZP_07183060.1| 50S ribosomal protein L3 [Escherichia coli MS 69-1] gi|301021130|ref|ZP_07185170.1| 50S ribosomal protein L3 [Escherichia coli MS 196-1] gi|301046091|ref|ZP_07193269.1| 50S ribosomal protein L3 [Escherichia coli MS 185-1] gi|301305529|ref|ZP_07211621.1| 50S ribosomal protein L3 [Escherichia coli MS 124-1] gi|301325113|ref|ZP_07218647.1| 50S ribosomal protein L3 [Escherichia coli MS 78-1] gi|301643860|ref|ZP_07243891.1| 50S ribosomal protein L3 [Escherichia coli MS 146-1] gi|306816337|ref|ZP_07450475.1| 50S ribosomal protein L3 [Escherichia coli NC101] gi|307140003|ref|ZP_07499359.1| 50S ribosomal protein L3 [Escherichia coli H736] gi|307315101|ref|ZP_07594684.1| 50S ribosomal protein L3 [Escherichia coli W] gi|309785642|ref|ZP_07680273.1| ribosomal L3 family protein [Shigella dysenteriae 1617] gi|309794595|ref|ZP_07689017.1| 50S ribosomal protein L3 [Escherichia coli MS 145-7] gi|312968355|ref|ZP_07782565.1| ribosomal L3 family protein [Escherichia coli 2362-75] gi|312972419|ref|ZP_07786593.1| ribosomal L3 family protein [Escherichia coli 1827-70] gi|331644016|ref|ZP_08345145.1| 50S ribosomal protein L3 [Escherichia coli H736] gi|331649117|ref|ZP_08350203.1| 50S ribosomal protein L3 [Escherichia coli M605] gi|331654913|ref|ZP_08355912.1| 50S ribosomal protein L3 [Escherichia coli M718] gi|331659610|ref|ZP_08360548.1| 50S ribosomal protein L3 [Escherichia coli TA206] gi|331664933|ref|ZP_08365834.1| 50S ribosomal protein L3 [Escherichia coli TA143] gi|331670149|ref|ZP_08370988.1| 50S ribosomal protein L3 [Escherichia coli TA271] gi|331679389|ref|ZP_08380059.1| 50S ribosomal protein L3 [Escherichia coli H591] gi|331684962|ref|ZP_08385548.1| 50S ribosomal protein L3 [Escherichia coli H299] gi|42560216|sp|P60438|RL3_ECOLI RecName: Full=50S ribosomal protein L3 gi|42560217|sp|P60439|RL3_ECOL6 RecName: Full=50S ribosomal protein L3 gi|42560218|sp|P60440|RL3_ECO57 RecName: Full=50S ribosomal protein L3 gi|42560221|sp|P60447|RL3_SHIFL RecName: Full=50S ribosomal protein L3 gi|109893554|sp|Q31VV6|RL3_SHIBS RecName: Full=50S ribosomal protein L3 gi|109893555|sp|Q32B31|RL3_SHIDS RecName: Full=50S ribosomal protein L3 gi|123048781|sp|Q0TCE1|RL3_ECOL5 RecName: Full=50S ribosomal protein L3 gi|123084373|sp|Q1R602|RL3_ECOUT RecName: Full=50S ribosomal protein L3 gi|123342427|sp|Q0SZY3|RL3_SHIF8 RecName: Full=50S ribosomal protein L3 gi|166233140|sp|A1AGK7|RL3_ECOK1 RecName: Full=50S ribosomal protein L3 gi|166990934|sp|A7ZSK9|RL3_ECO24 RecName: Full=50S ribosomal protein L3 gi|166990935|sp|A8A5C5|RL3_ECOHS RecName: Full=50S ribosomal protein L3 gi|189042843|sp|B1IPX9|RL3_ECOLC RecName: Full=50S ribosomal protein L3 gi|226725166|sp|B7MCT5|RL3_ECO45 RecName: Full=50S ribosomal protein L3 gi|226725167|sp|B5YTP1|RL3_ECO5E RecName: Full=50S ribosomal protein L3 gi|226725168|sp|B7NLN9|RL3_ECO7I RecName: Full=50S ribosomal protein L3 gi|226725169|sp|B7M1N4|RL3_ECO8A RecName: Full=50S ribosomal protein L3 gi|226725170|sp|B1X6H1|RL3_ECODH RecName: Full=50S ribosomal protein L3 gi|226725171|sp|B7NDU1|RL3_ECOLU RecName: Full=50S ribosomal protein L3 gi|226725172|sp|B6I234|RL3_ECOSE RecName: Full=50S ribosomal protein L3 gi|226725173|sp|B1LHD4|RL3_ECOSM RecName: Full=50S ribosomal protein L3 gi|226725175|sp|B7LS40|RL3_ESCF3 RecName: Full=50S ribosomal protein L3 gi|226730569|sp|B2U2T8|RL3_SHIB3 RecName: Full=50S ribosomal protein L3 gi|254803671|sp|B7UK44|RL3_ECO27 RecName: Full=50S ribosomal protein L3 gi|254803672|sp|B7L4K9|RL3_ECO55 RecName: Full=50S ribosomal protein L3 gi|254803673|sp|B7N0W0|RL3_ECO81 RecName: Full=50S ribosomal protein L3 gi|259647744|sp|C4ZUH5|RL3_ECOBW RecName: Full=50S ribosomal protein L3 gi|33357903|pdb|1P85|B Chain B, Real Space Refined Coordinates Of The 50s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp State Of E. Coli 70s Ribosome gi|33357931|pdb|1P86|B Chain B, Real Space Refined Coordinates Of The 50s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Initiation-Like State Of E. Coli 70s Ribosome gi|83754065|pdb|2AW4|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|83754121|pdb|2AWB|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|116666574|pdb|1VS6|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|116666626|pdb|1VS8|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|116667436|pdb|2GYA|B Chain B, Structure Of The 50s Subunit Of A Pre-Translocational E. Coli Ribosome Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1056 gi|116667488|pdb|2GYC|B Chain B, Structure Of The 50s Subunit Of A Secm-Stalled E. Coli Ribosome Complex Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1143 gi|118138094|pdb|2I2T|D Chain D, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|118138148|pdb|2I2V|D Chain D, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|119390348|pdb|2J28|D Chain D, Model Of E. Coli Srp Bound To 70s Rncs gi|157836049|pdb|2QOV|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 50s Subunit Of The First 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836101|pdb|2QOX|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836153|pdb|2QOZ|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836205|pdb|2QP1|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|158429724|pdb|2QAM|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429776|pdb|2QAO|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429834|pdb|2QBA|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 50s Subunit Of The First 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429886|pdb|2QBC|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 50s Subunit Of The Second 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429938|pdb|2QBE|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429991|pdb|2QBG|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430044|pdb|2QBI|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Gentamicin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430097|pdb|2QBK|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Gentamicin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158431397|pdb|2Z4L|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The First 70s Ribosome, With Paromomycin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158431450|pdb|2Z4N|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 50s Subunit Of The Second 70s Ribosome, With Paromomycin And Rrf Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|168988734|pdb|2VHM|D Chain D, Structure Of Pdf Binding Helix In Complex With The Ribosome (Part 1 Of 4) gi|168988765|pdb|2VHN|D Chain D, Structure Of Pdf Binding Helix In Complex With The Ribosome. (Part 2 Of 4) gi|169404606|pdb|2RDO|D Chain D, 50s Subunit With Ef-G(Gdpnp) And Rrf Bound gi|197107304|pdb|3DF2|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 50s Subunit Of The First 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|197107356|pdb|3DF4|D Chain D, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|209870357|pdb|3BBX|D Chain D, The Hsp15 Protein Fitted Into The Low Resolution Cryo-Em Map 50s.Nc-Trna.Hsp15 Complex gi|224510762|pdb|3FIK|D Chain D, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry Consists Of The 50s Subunit. gi|251837155|pdb|3IY9|C Chain C, Leishmania Tarentolae Mitochondrial Large Ribosomal Subunit Model gi|256032397|pdb|3E1B|Y Chain Y, Structure Of The 50s Subunit Of E. Coli Ribosome In Pre- Accommodation State gi|256032454|pdb|3E1D|Y Chain Y, Structure Of The 50s Subunit Of E. Coli Ribosome In Post- Accommodation State gi|257097345|pdb|3I1N|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097397|pdb|3I1P|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097451|pdb|3I1R|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097505|pdb|3I1T|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097560|pdb|3I20|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097615|pdb|3I22|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|290560335|pdb|3KCR|D Chain D, Ribosome-Secy Complex. This Entry 3kcr Contains 50s Ribosomal Subnit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 3kc4 gi|294662253|pdb|2WWQ|D Chain D, E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. This File Contains The 50s, The P-Site Trna And The Tnac Leader Peptide (Part 2 Of 2). gi|308198358|pdb|1VT2|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|308198732|pdb|3ORB|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 50s Subunit Of The First 70s Ribosome Bound To Cem-101. gi|308388010|pdb|3OFQ|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|308388041|pdb|3OFR|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 50s Subunit Of The First 70s Ribosome With Erthromycin Bound. gi|309320068|pdb|3OFC|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 50s Subunit Of The First 70s Ribosome With Chloramphenicol Bound. gi|309320099|pdb|3OFD|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|309320172|pdb|3OFZ|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 50s Subunit Of The First 70s Ribosome Bound To Clindamycin. gi|309320203|pdb|3OG0|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|315113657|pdb|3OAS|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|315113688|pdb|3OAT|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 50s Subunit Of The First 70s Ribosome With Telithromycin Bound. gi|326634213|pdb|3IZT|E Chain E, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Large Subunit Of A Ribosome Programmed With A Near-Cognate Codon. gi|326634246|pdb|3IZU|E Chain E, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Large Subunit Of A Ribosome Programmed With A Cognate Codon gi|329666019|pdb|3J01|D Chain D, Structure Of The Ribosome-Secye Complex In The Membrane Environment gi|12517952|gb|AAG58441.1|AE005557_10 50S ribosomal subunit protein L3 [Escherichia coli O157:H7 str. EDL933] gi|26110343|gb|AAN82529.1|AE016767_289 50S ribosomal protein L3 [Escherichia coli CFT073] gi|42827|emb|CAA26460.1| unnamed protein product [Escherichia coli] gi|606254|gb|AAA58117.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12 substr. MG1655] gi|1789716|gb|AAC76345.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12 substr. MG1655] gi|13363658|dbj|BAB37608.1| 50S ribosomal subunit protein L3 [Escherichia coli O157:H7 str. Sakai] gi|24053796|gb|AAN44815.1| 50S ribosomal subunit protein L3 [Shigella flexneri 2a str. 301] gi|30043641|gb|AAP19361.1| 50S ribosomal subunit protein L3 [Shigella flexneri 2a str. 2457T] gi|81242764|gb|ABB63474.1| 50S ribosomal subunit protein L3 [Shigella dysenteriae Sd197] gi|81247094|gb|ABB67802.1| 50S ribosomal subunit protein L3 [Shigella boydii Sb227] gi|85676721|dbj|BAE77971.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K12 substr. W3110] gi|91074331|gb|ABE09212.1| 50S ribosomal subunit protein L3 [Escherichia coli UTI89] gi|110345151|gb|ABG71388.1| 50S ribosomal protein L3 [Escherichia coli 536] gi|110616715|gb|ABF05382.1| 50S ribosomal subunit protein L3 [Shigella flexneri 5 str. 8401] gi|115514722|gb|ABJ02797.1| 50S ribosomal subunit protein L3 [Escherichia coli APEC O1] gi|157068474|gb|ABV07729.1| ribosomal protein L3 [Escherichia coli HS] gi|157078636|gb|ABV18344.1| ribosomal protein L3 [Escherichia coli E24377A] gi|169753372|gb|ACA76071.1| ribosomal protein L3 [Escherichia coli ATCC 8739] gi|169890674|gb|ACB04381.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12 substr. DH10B] gi|170518037|gb|ACB16215.1| ribosomal protein L3 [Escherichia coli SMS-3-5] gi|187430669|gb|ACD09943.1| ribosomal protein L3 [Shigella boydii CDC 3083-94] gi|188013518|gb|EDU51640.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4113] gi|188490342|gb|EDU65445.1| ribosomal protein L3 [Escherichia coli 53638] gi|189359274|gb|EDU77693.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4401] gi|189361771|gb|EDU80190.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4486] gi|189374499|gb|EDU92915.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC869] gi|190908143|gb|EDV67734.1| ribosomal protein L3 [Escherichia coli F11] gi|208726287|gb|EDZ75888.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4206] gi|208733387|gb|EDZ82074.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4045] gi|208738455|gb|EDZ86137.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4042] gi|209160382|gb|ACI37815.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4115] gi|209757038|gb|ACI76831.1| 50S ribosomal subunit protein L3 [Escherichia coli] gi|209757040|gb|ACI76832.1| 50S ribosomal subunit protein L3 [Escherichia coli] gi|209757042|gb|ACI76833.1| 50S ribosomal subunit protein L3 [Escherichia coli] gi|209757044|gb|ACI76834.1| 50S ribosomal subunit protein L3 [Escherichia coli] gi|209757046|gb|ACI76835.1| 50S ribosomal subunit protein L3 [Escherichia coli] gi|209914045|dbj|BAG79119.1| 50S ribosomal protein L3 [Escherichia coli SE11] gi|215266692|emb|CAS11131.1| 50S ribosomal subunit protein L3 [Escherichia coli O127:H6 str. E2348/69] gi|217321934|gb|EEC30358.1| ribosomal protein L3 [Escherichia coli O157:H7 str. TW14588] gi|218353744|emb|CAV00038.1| 50S ribosomal subunit protein L3 [Escherichia coli 55989] gi|218358136|emb|CAQ90783.1| 50S ribosomal subunit protein L3 [Escherichia fergusonii ATCC 35469] gi|218362645|emb|CAR00271.1| 50S ribosomal subunit protein L3 [Escherichia coli IAI1] gi|218367150|emb|CAR04924.1| 50S ribosomal subunit protein L3 [Escherichia coli S88] gi|218372068|emb|CAR19928.1| 50S ribosomal subunit protein L3 [Escherichia coli IAI39] gi|218429170|emb|CAR09978.1| 50S ribosomal subunit protein L3 [Escherichia coli ED1a] gi|218434024|emb|CAR14941.1| 50S ribosomal subunit protein L3 [Escherichia coli UMN026] gi|222035029|emb|CAP77772.1| 50S ribosomal protein L3 [Escherichia coli LF82] gi|226838987|gb|EEH71010.1| 50S ribosomal protein L3 [Escherichia sp. 1_1_43] gi|226902314|gb|EEH88573.1| ribosomal protein L3 [Escherichia sp. 3_2_53FAA] gi|227839595|gb|EEJ50061.1| 50S ribosomal protein L3 [Escherichia coli 83972] gi|238859868|gb|ACR61866.1| 50S ribosomal subunit protein L3 [Escherichia coli BW2952] gi|242378847|emb|CAQ33639.1| 50S ribosomal subunit protein L3, subunit of 50S ribosomal subunit and ribosome [Escherichia coli BL21(DE3)] gi|253322900|gb|ACT27502.1| ribosomal protein L3 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975149|gb|ACT40820.1| 50S ribosomal protein L3 [Escherichia coli B str. REL606] gi|253979305|gb|ACT44975.1| 50S ribosomal protein L3 [Escherichia coli BL21(DE3)] gi|254594657|gb|ACT74018.1| 50S ribosomal subunit protein L3 [Escherichia coli O157:H7 str. TW14359] gi|257756090|dbj|BAI27592.1| 50S ribosomal subunit protein L3 [Escherichia coli O26:H11 str. 11368] gi|257761265|dbj|BAI32762.1| 50S ribosomal subunit protein L3 [Escherichia coli O103:H2 str. 12009] gi|257766419|dbj|BAI37914.1| 50S ribosomal subunit protein L3 [Escherichia coli O111:H- str. 11128] gi|260447661|gb|ACX38083.1| ribosomal protein L3 [Escherichia coli DH1] gi|281180355|dbj|BAI56685.1| 50S ribosomal protein L3 [Escherichia coli SE15] gi|281602685|gb|ADA75669.1| 50S ribosomal protein L3 [Shigella flexneri 2002017] gi|290764551|gb|ADD58512.1| 50S ribosomal protein L3 [Escherichia coli O55:H7 str. CB9615] gi|291321764|gb|EFE61195.1| 50S ribosomal protein L3 [Escherichia coli B088] gi|291425728|gb|EFE98762.1| 50S ribosomal protein L3 [Escherichia coli FVEC1412] gi|291431313|gb|EFF04298.1| 50S ribosomal protein L3 [Escherichia coli B185] gi|291468386|gb|EFF10879.1| 50S ribosomal protein L3 [Escherichia coli B354] gi|294489959|gb|ADE88715.1| ribosomal protein L3 [Escherichia coli IHE3034] gi|298276493|gb|EFI18011.1| 50S ribosomal protein L3 [Escherichia coli FVEC1302] gi|299881660|gb|EFI89871.1| 50S ribosomal protein L3 [Escherichia coli MS 196-1] gi|300301917|gb|EFJ58302.1| 50S ribosomal protein L3 [Escherichia coli MS 185-1] gi|300309009|gb|EFJ63529.1| 50S ribosomal protein L3 [Escherichia coli MS 200-1] gi|300318234|gb|EFJ68018.1| 50S ribosomal protein L3 [Escherichia coli MS 175-1] gi|300359499|gb|EFJ75369.1| 50S ribosomal protein L3 [Escherichia coli MS 198-1] gi|300399526|gb|EFJ83064.1| 50S ribosomal protein L3 [Escherichia coli MS 69-1] gi|300404441|gb|EFJ87979.1| 50S ribosomal protein L3 [Escherichia coli MS 84-1] gi|300409402|gb|EFJ92940.1| 50S ribosomal protein L3 [Escherichia coli MS 45-1] gi|300414554|gb|EFJ97864.1| 50S ribosomal protein L3 [Escherichia coli MS 115-1] gi|300421719|gb|EFK05030.1| 50S ribosomal protein L3 [Escherichia coli MS 182-1] gi|300453788|gb|EFK17408.1| 50S ribosomal protein L3 [Escherichia coli MS 116-1] gi|300459474|gb|EFK22967.1| 50S ribosomal protein L3 [Escherichia coli MS 21-1] gi|300460037|gb|EFK23530.1| 50S ribosomal protein L3 [Escherichia coli MS 187-1] gi|300524643|gb|EFK45712.1| 50S ribosomal protein L3 [Escherichia coli MS 119-7] gi|300532362|gb|EFK53424.1| 50S ribosomal protein L3 [Escherichia coli MS 107-1] gi|300839224|gb|EFK66984.1| 50S ribosomal protein L3 [Escherichia coli MS 124-1] gi|300847992|gb|EFK75752.1| 50S ribosomal protein L3 [Escherichia coli MS 78-1] gi|301077763|gb|EFK92569.1| 50S ribosomal protein L3 [Escherichia coli MS 146-1] gi|305850733|gb|EFM51190.1| 50S ribosomal protein L3 [Escherichia coli NC101] gi|306905450|gb|EFN35985.1| 50S ribosomal protein L3 [Escherichia coli W] gi|307555407|gb|ADN48182.1| 50S ribosomal subunit protein L3 [Escherichia coli ABU 83972] gi|308121645|gb|EFO58907.1| 50S ribosomal protein L3 [Escherichia coli MS 145-7] gi|308926762|gb|EFP72238.1| ribosomal L3 family protein [Shigella dysenteriae 1617] gi|309703732|emb|CBJ03073.1| 50S ribosomal subunit protein L3 [Escherichia coli ETEC H10407] gi|310334796|gb|EFQ01001.1| ribosomal L3 family protein [Escherichia coli 1827-70] gi|312287180|gb|EFR15090.1| ribosomal L3 family protein [Escherichia coli 2362-75] gi|312947871|gb|ADR28698.1| 50S ribosomal protein L3 [Escherichia coli O83:H1 str. NRG 857C] gi|313647370|gb|EFS11822.1| ribosomal L3 family protein [Shigella flexneri 2a str. 2457T] gi|315062612|gb|ADT76939.1| 50S ribosomal subunit protein L3 [Escherichia coli W] gi|315137895|dbj|BAJ45054.1| 50S ribosomal protein L3 [Escherichia coli DH1] gi|315255903|gb|EFU35871.1| 50S ribosomal protein L3 [Escherichia coli MS 85-1] gi|315284605|gb|EFU44050.1| 50S ribosomal protein L3 [Escherichia coli MS 110-3] gi|315292363|gb|EFU51715.1| 50S ribosomal protein L3 [Escherichia coli MS 153-1] gi|315298618|gb|EFU57873.1| 50S ribosomal protein L3 [Escherichia coli MS 16-3] gi|315616997|gb|EFU97609.1| ribosomal L3 family protein [Escherichia coli 3431] gi|320173961|gb|EFW49137.1| LSU ribosomal protein L3p (L3e) [Shigella dysenteriae CDC 74-1112] gi|320180154|gb|EFW55093.1| LSU ribosomal protein L3p (L3e) [Shigella boydii ATCC 9905] gi|320187038|gb|EFW61750.1| LSU ribosomal protein L3p (L3e) [Shigella flexneri CDC 796-83] gi|320191649|gb|EFW66299.1| LSU ribosomal protein L3p (L3e) [Escherichia coli O157:H7 str. EC1212] gi|320639625|gb|EFX09219.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 str. G5101] gi|320645123|gb|EFX14139.1| 50S ribosomal protein L3 [Escherichia coli O157:H- str. 493-89] gi|320650434|gb|EFX18900.1| 50S ribosomal protein L3 [Escherichia coli O157:H- str. H 2687] gi|320655959|gb|EFX23879.1| 50S ribosomal protein L3 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661411|gb|EFX28826.1| 50S ribosomal protein L3 [Escherichia coli O55:H7 str. USDA 5905] gi|320666433|gb|EFX33416.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 str. LSU-61] gi|323154158|gb|EFZ40361.1| ribosomal L3 family protein [Escherichia coli EPECa14] gi|323162999|gb|EFZ48834.1| ribosomal protein L3 family protein [Escherichia coli E128010] gi|323179144|gb|EFZ64718.1| ribosomal protein L3 family protein [Escherichia coli 1180] gi|323182798|gb|EFZ68199.1| ribosomal protein L3 family protein [Escherichia coli 1357] gi|323189075|gb|EFZ74359.1| ribosomal protein L3 family protein [Escherichia coli RN587/1] gi|323376801|gb|ADX49069.1| 50S ribosomal protein L3 [Escherichia coli KO11] gi|323934482|gb|EGB30890.1| 50S ribosomal protein L3 [Escherichia coli E1520] gi|323939258|gb|EGB35470.1| 50S ribosomal protein L3 [Escherichia coli E482] gi|323944259|gb|EGB40335.1| 50S ribosomal protein L3 [Escherichia coli H120] gi|323950234|gb|EGB46116.1| 50S ribosomal protein L3 [Escherichia coli H252] gi|323954557|gb|EGB50340.1| 50S ribosomal protein L3 [Escherichia coli H263] gi|323959529|gb|EGB55182.1| 50S ribosomal protein L3 [Escherichia coli H489] gi|323970124|gb|EGB65398.1| 50S ribosomal protein L3 [Escherichia coli TA007] gi|323974727|gb|EGB69840.1| 50S ribosomal protein L3 [Escherichia coli TW10509] gi|324009011|gb|EGB78230.1| 50S ribosomal protein L3 [Escherichia coli MS 57-2] gi|324014936|gb|EGB84155.1| 50S ribosomal protein L3 [Escherichia coli MS 60-1] gi|324017862|gb|EGB87081.1| 50S ribosomal protein L3 [Escherichia coli MS 117-3] gi|324111999|gb|EGC05978.1| 50S ribosomal protein L3 [Escherichia fergusonii B253] gi|324116290|gb|EGC10210.1| 50S ribosomal protein L3 [Escherichia coli E1167] gi|325498885|gb|EGC96744.1| 50S ribosomal protein L3 [Escherichia fergusonii ECD227] gi|326344552|gb|EGD68301.1| LSU ribosomal protein L3p (L3e) [Escherichia coli O157:H7 str. 1125] gi|327250968|gb|EGE62661.1| ribosomal protein L3 family protein [Escherichia coli STEC_7v] gi|330909362|gb|EGH37876.1| LSU ribosomal protein L3p (L3e) [Escherichia coli AA86] gi|331036310|gb|EGI08536.1| 50S ribosomal protein L3 [Escherichia coli H736] gi|331041615|gb|EGI13759.1| 50S ribosomal protein L3 [Escherichia coli M605] gi|331046928|gb|EGI19006.1| 50S ribosomal protein L3 [Escherichia coli M718] gi|331052825|gb|EGI24858.1| 50S ribosomal protein L3 [Escherichia coli TA206] gi|331057443|gb|EGI29429.1| 50S ribosomal protein L3 [Escherichia coli TA143] gi|331062211|gb|EGI34131.1| 50S ribosomal protein L3 [Escherichia coli TA271] gi|331072561|gb|EGI43886.1| 50S ribosomal protein L3 [Escherichia coli H591] gi|331077333|gb|EGI48545.1| 50S ribosomal protein L3 [Escherichia coli H299] gi|332085471|gb|EGI90637.1| ribosomal protein L3 family protein [Shigella boydii 5216-82] gi|332086009|gb|EGI91173.1| ribosomal protein L3 family protein [Shigella dysenteriae 155-74] gi|332090310|gb|EGI95408.1| ribosomal protein L3 family protein [Shigella boydii 3594-74] gi|332104227|gb|EGJ07573.1| 50S ribosomal subunit protein L3 [Shigella sp. D9] gi|223116|prf||0509226A protein L3 Length = 209 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|52078609|ref|YP_077400.1| 50S ribosomal protein L3 [Bacillus licheniformis ATCC 14580] gi|52783971|ref|YP_089800.1| 50S ribosomal protein L3 [Bacillus licheniformis ATCC 14580] gi|319649116|ref|ZP_08003324.1| 50S ribosomal protein L3 [Bacillus sp. BT1B_CT2] gi|81825438|sp|Q65PA7|RL3_BACLD RecName: Full=50S ribosomal protein L3 gi|52001820|gb|AAU21762.1| ribosomal protein L3 (BL3) [Bacillus licheniformis ATCC 14580] gi|52346473|gb|AAU39107.1| RplC [Bacillus licheniformis ATCC 14580] gi|317388816|gb|EFV69635.1| 50S ribosomal protein L3 [Bacillus sp. BT1B_CT2] Length = 209 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 93/212 (43%), Positives = 128/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTSENDGYEAIQIGFDDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +PK+ + E R D D VG F+ G++VDVTG + GKGF Sbjct: 61 ANKPEKGHVAKAETAPKRFVKELRGV-DMDAYEVGQEVKVDIFSNGEIVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH +HG S HR GS G DP RVFK K + GRMGG ++TV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPV-DPNRVFKGKLLPGRMGGEQITVQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGAKK S + V+ + KS Sbjct: 178 KVDAERNLLLVKGNVPGAKK-SLVTVKSAVKS 208 >gi|254501408|ref|ZP_05113559.1| ribosomal protein L3 [Labrenzia alexandrii DFL-11] gi|222437479|gb|EEE44158.1| ribosomal protein L3 [Labrenzia alexandrii DFL-11] Length = 232 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 125/211 (59%), Positives = 157/211 (74%), Gaps = 2/211 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++A+K+GMT +YN G +PVTVL L+NCQVV HRT +KNGY A+Q+GAG KVKN K Sbjct: 1 MIAQKVGMTRIYNDAGEHVPVTVLRLENCQVVAHRTDEKNGYNALQLGAGTRKVKNTPKA 60 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +RG F+ V PK+ + EFRV + +++ VG+ + ++ GQ VDVTG +IGKGF+G M Sbjct: 61 LRGHFAVAKVEPKRTVVEFRVSAE-NMIDVGAEITADHYVEGQFVDVTGTSIGKGFAGVM 119 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHNFGG RA+HG SISHRSHGSTG QDPGRVFK KKMAG MG RVT +NL+VV D Sbjct: 120 KRHNFGGGRASHGNSISHRSHGSTGQCQDPGRVFKGKKMAGHMGDARVTTQNLKVVRTDV 179 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +RGLI+V+G VPGA K WI VRD+ K A+ Sbjct: 180 ERGLIMVEGSVPGA-KGGWIQVRDAIKKALP 209 >gi|311277725|ref|YP_003939956.1| 50S ribosomal protein L3 [Enterobacter cloacae SCF1] gi|308746920|gb|ADO46672.1| 50S ribosomal protein L3 [Enterobacter cloacae SCF1] Length = 209 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 93/210 (44%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V+ Sbjct: 2 IGLIGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFAEVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|293602635|ref|ZP_06685078.1| 50S ribosomal protein L3 [Achromobacter piechaudii ATCC 43553] gi|292819007|gb|EFF78045.1| 50S ribosomal protein L3 [Achromobacter piechaudii ATCC 43553] Length = 233 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 99/216 (45%), Positives = 132/216 (61%), Gaps = 3/216 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+V RK+GMT ++ EG IPVTVL + N +V ++L+ +GY A+QV G + V Sbjct: 16 RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQVKSLETDGYAAIQVAYGTRRASRV 75 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119 ++P G ++ L EFR+ GSV + F GQ VDVTG TIGKG Sbjct: 76 AQPQTGHYAKAGTEAGSILKEFRLDPARAAEFAAGSVIAVESVFEAGQQVDVTGTTIGKG 135 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRH+FG RA+HG S SHR GS G QDPGR+F K+MAG +G TV+NL+V Sbjct: 136 FAGTIKRHHFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMAGHLGDVTRTVQNLDV 195 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 V VD +RGL+LVKG VPG + I+VR + K+ Sbjct: 196 VRVDVERGLLLVKGAVPG-HAGADIVVRPAIKAPAK 230 >gi|319407426|emb|CBI81077.1| 50S ribosomal protein L3 [Bartonella sp. 1-1C] Length = 254 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 133/219 (60%), Positives = 162/219 (73%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT +YN G +PVTVL LD CQV+ RT++KNGY AVQ+G G AK+KN Sbjct: 9 MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLDKCQVIAQRTVEKNGYTAVQLGVGFAKIKN 68 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK +RG F+ V PK K+ EFRV D +LL VG+ + +F GQ VDVTG++IGKGF Sbjct: 69 TSKALRGHFAKAVVEPKAKIAEFRVSPD-NLLDVGTEITVEHFVPGQRVDVTGVSIGKGF 127 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 128 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGRVRVTTQNIEVV 187 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 S D RGLILV+G V G+ K SWILVRD+ K + Sbjct: 188 STDVDRGLILVRGSVSGS-KGSWILVRDAVKRRLPSNAP 225 >gi|123444098|ref|YP_001008068.1| 50S ribosomal protein L3 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|238752687|ref|ZP_04614158.1| 50S ribosomal protein L3 [Yersinia rohdei ATCC 43380] gi|238783169|ref|ZP_04627195.1| 50S ribosomal protein L3 [Yersinia bercovieri ATCC 43970] gi|238788910|ref|ZP_04632700.1| 50S ribosomal protein L3 [Yersinia frederiksenii ATCC 33641] gi|238797238|ref|ZP_04640739.1| 50S ribosomal protein L3 [Yersinia mollaretii ATCC 43969] gi|332163259|ref|YP_004299836.1| 50S ribosomal protein L3 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|166234608|sp|A1JS47|RL3_YERE8 RecName: Full=50S ribosomal protein L3 gi|122091059|emb|CAL13942.1| 50S ribosomal protein L3 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|238709114|gb|EEQ01361.1| 50S ribosomal protein L3 [Yersinia rohdei ATCC 43380] gi|238715965|gb|EEQ07951.1| 50S ribosomal protein L3 [Yersinia bercovieri ATCC 43970] gi|238718875|gb|EEQ10690.1| 50S ribosomal protein L3 [Yersinia mollaretii ATCC 43969] gi|238722937|gb|EEQ14587.1| 50S ribosomal protein L3 [Yersinia frederiksenii ATCC 33641] gi|318607744|emb|CBY29242.1| LSU ribosomal protein L3p (L3e) [Yersinia enterocolitica subsp. palearctica Y11] gi|325667489|gb|ADZ44133.1| 50S ribosomal protein L3 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330861855|emb|CBX72026.1| 50S ribosomal protein L3 [Yersinia enterocolitica W22703] Length = 209 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 94/210 (44%), Positives = 131/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V ++L+ +GY AVQV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYRAVQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ + + G S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLPEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG +G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA + I V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGATGGNLI-VKPAVKA 209 >gi|118443770|ref|YP_877198.1| 50S ribosomal protein L3 [Clostridium novyi NT] gi|166233135|sp|A0PXU6|RL3_CLONN RecName: Full=50S ribosomal protein L3 gi|118134226|gb|ABK61270.1| ribosomal protein L3 [Clostridium novyi NT] Length = 209 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 86/212 (40%), Positives = 130/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ RK+GMT +++ G+ IPVTV+ C V+ +T +K+GY A+QVG + + K Sbjct: 1 MKKAIIGRKIGMTQIFDENGKVIPVTVVEAGPCAVLQKKTEEKDGYNAIQVGFEDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G F+ VS K+ + EFR++ D+ VG+ F G VDVTG++ GKGF Sbjct: 61 ANKPKKGHFAKAGVSLKRIVREFRLENIDE-YEVGTEIKADVFAAGDKVDVTGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF HG S HR+ GS G DP R FKNKKM G MG + T+ N+EVV Sbjct: 120 QGTIKRWNFHRGPMAHG-SKYHRAVGSMGAASDPSRTFKNKKMPGHMGNKKSTILNIEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V + ++L+KG +PG K +++++D+ K+ Sbjct: 179 KVMADKNVLLIKGGIPGPNKG-YVVIKDTVKA 209 >gi|325293336|ref|YP_004279200.1| 50S ribosomal protein L3 [Agrobacterium sp. H13-3] gi|325061189|gb|ADY64880.1| 50S ribosomal protein L3 [Agrobacterium sp. H13-3] Length = 213 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 139/215 (64%), Positives = 170/215 (79%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G IPVTVL +DN QVV RT DKNGY AVQ+GAG++KVKN Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHIPVTVLRMDNVQVVSQRTEDKNGYTAVQLGAGQSKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +K +RG F++ NV PK KL EFRV + +L+ +G+ + ++F GQLVDVTG TIGKGF Sbjct: 61 TTKALRGHFAAANVEPKAKLVEFRVSPE-NLIDIGATLTATHFQAGQLVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGG RA+HG S+SHR+HGSTG QDPGRV+K K+MAG MG RVT +NLEVV Sbjct: 120 AGAMKRHNFGGGRASHGNSVSHRAHGSTGNNQDPGRVWKGKRMAGHMGQTRVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 S D+ RGLILVKG VPG+ K +WI+VRD+ KSA Sbjct: 180 STDEDRGLILVKGAVPGS-KGAWIIVRDAVKSAAK 213 >gi|24371829|ref|NP_715871.1| 50S ribosomal protein L3 [Shewanella oneidensis MR-1] gi|113968544|ref|YP_732337.1| 50S ribosomal protein L3 [Shewanella sp. MR-4] gi|114045707|ref|YP_736257.1| 50S ribosomal protein L3 [Shewanella sp. MR-7] gi|117918657|ref|YP_867849.1| 50S ribosomal protein L3 [Shewanella sp. ANA-3] gi|42559642|sp|Q8EK68|RL3_SHEON RecName: Full=50S ribosomal protein L3 gi|122945060|sp|Q0I0A5|RL3_SHESR RecName: Full=50S ribosomal protein L3 gi|123325489|sp|Q0HNT7|RL3_SHESM RecName: Full=50S ribosomal protein L3 gi|166234595|sp|A0KRM4|RL3_SHESA RecName: Full=50S ribosomal protein L3 gi|24345642|gb|AAN53316.1|AE015473_3 ribosomal protein L3 [Shewanella oneidensis MR-1] gi|113883228|gb|ABI37280.1| LSU ribosomal protein L3P [Shewanella sp. MR-4] gi|113887149|gb|ABI41200.1| LSU ribosomal protein L3P [Shewanella sp. MR-7] gi|117610989|gb|ABK46443.1| LSU ribosomal protein L3P [Shewanella sp. ANA-3] Length = 212 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 93/213 (43%), Positives = 130/213 (61%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G IPVTV+ + +V +TL+ +GY A+QV G K Sbjct: 1 MAIGLIGRKVGMTRIFTEDGVSIPVTVIEVAGNRVTQVKTLETDGYRALQVTTGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G F+ V + L+E R+ + + + VG+ + F VDVTG + GKG Sbjct: 61 ITKPEAGHFAKSGVEAGRGLWELRLADGEGEGIEVGAELNVGIFADVAKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF THG S+SHRS+GS G Q PGRVFK KKM+G MG RVT +NL+V Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LVKG VPGA I ++ + K+ Sbjct: 181 VRVDVERNLLLVKGAVPGATNGDLI-IKPAVKA 212 >gi|238754175|ref|ZP_04615533.1| 50S ribosomal protein L3 [Yersinia ruckeri ATCC 29473] gi|238707671|gb|EEQ00031.1| 50S ribosomal protein L3 [Yersinia ruckeri ATCC 29473] Length = 209 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 94/210 (44%), Positives = 131/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V ++L+ +GY AVQV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYRAVQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ + + G S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLAEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG +G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA + I V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGATGGNLI-VKPAVKA 209 >gi|110800321|ref|YP_697094.1| 50S ribosomal protein L3 [Clostridium perfringens ATCC 13124] gi|161485641|ref|NP_563321.2| 50S ribosomal protein L3 [Clostridium perfringens str. 13] gi|182626914|ref|ZP_02954647.1| ribosomal protein L3 [Clostridium perfringens D str. JGS1721] gi|42559666|sp|Q8XHS3|RL3_CLOPE RecName: Full=50S ribosomal protein L3 gi|123049583|sp|Q0TMP6|RL3_CLOP1 RecName: Full=50S ribosomal protein L3 gi|110674968|gb|ABG83955.1| 50S ribosomal protein L3 [Clostridium perfringens ATCC 13124] gi|177907704|gb|EDT70319.1| ribosomal protein L3 [Clostridium perfringens D str. JGS1721] Length = 209 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 89/212 (41%), Positives = 129/212 (60%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT +++ GR IPVTV+ C VV +T++ +GY A+QVG GE + K Sbjct: 1 MKKAIIGKKVGMTQIFDENGRVIPVTVVEAGPCVVVQKKTVETDGYDAIQVGFGELREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G F+ VS ++ L EFR +D VG F +G VDV+G++ GKGF Sbjct: 61 VNKPRKGHFAKAGVSLRRTLKEFR-MEDVANYNVGDEIKVDTFEIGDKVDVSGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR N +HG S HR+ GS G DP R FKNK+M G MG TV NLEVV Sbjct: 120 QGTIKRWNASRGPMSHG-SKFHRAPGSMGAASDPSRTFKNKRMPGHMGAKNTTVLNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + ++ +IL+KG +PG K + + +R+S K+ Sbjct: 179 KIMPEKNIILIKGGIPGPNKGTVV-IRNSVKA 209 >gi|323706450|ref|ZP_08118011.1| 50S ribosomal protein L3 [Thermoanaerobacterium xylanolyticum LX-11] gi|323534170|gb|EGB23960.1| 50S ribosomal protein L3 [Thermoanaerobacterium xylanolyticum LX-11] Length = 209 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 94/212 (44%), Positives = 129/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K GMT ++ + IPVTV+ C VV +T + +GY A+QVG G+ K K Sbjct: 1 MKKAILGKKHGMTQIF-VGNEMIPVTVVEAGPCVVVQKKTKENDGYDAIQVGFGDVKEKR 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + KP++G F+ NV KK L EFR+ D VGS F+VG VDV G + GKGF Sbjct: 60 LIKPLKGHFAKANVPFKKYLREFRLD-DISSYEVGSEIKADIFSVGDRVDVIGTSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR+N HG S HR GS G DP R FK K++ G MG RVT++NLEVV Sbjct: 119 AGVVKRYNANRGPMAHG-SKYHRRPGSMGASSDPSRTFKGKRLPGHMGNERVTIQNLEVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++ L+L+KG VPG K S +++RD+ KS Sbjct: 178 KVDPEKNLLLIKGSVPGV-KGSLLMIRDTVKS 208 >gi|149376686|ref|ZP_01894445.1| 50S ribosomal protein L3 [Marinobacter algicola DG893] gi|149359059|gb|EDM47524.1| 50S ribosomal protein L3 [Marinobacter algicola DG893] Length = 212 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 89/213 (41%), Positives = 134/213 (62%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ +G+ + VTV+ ++ ++ +TL+ +GY AVQV G+ + Sbjct: 1 MAIGIVGRKAGMTRIFTEDGQAVSVTVIEVEPNRITQLKTLESDGYRAVQVTVGKRRSSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G ++ V + L+EFR+ + + L G + S F GQ+VD G + GKG Sbjct: 61 VTKSEAGHYAKAGVEAGRGLWEFRLADGEGEELAAGGEITASIFEDGQVVDAVGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG+MG +VTV+NL+V Sbjct: 121 FQGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQMGNAQVTVQNLQV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+L++G VPGA + + ++ + K+ Sbjct: 181 VRVDAERNLLLIRGAVPGATGGNVV-IKPAVKA 212 >gi|308047991|ref|YP_003911557.1| 50S ribosomal protein L3P [Ferrimonas balearica DSM 9799] gi|307630181|gb|ADN74483.1| LSU ribosomal protein L3P [Ferrimonas balearica DSM 9799] Length = 212 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 96/213 (45%), Positives = 130/213 (61%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTV+ ++ +V +TLD +GY A+QV AG K Sbjct: 1 MAIGLVGRKVGMTRIFTPEGVSIPVTVIEVEPNRVTQVKTLDTDGYSALQVTAGAKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV-FSPSYFTVGQLVDVTGMTIGKG 119 V+KP G F+ V + +EFR+ + + FT VDVTG + GKG Sbjct: 61 VTKPEAGHFAKAGVEAGRGTWEFRLGEGEGEGIELGAELKVDIFTDVAKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F GA+KR NF THG S+SHR+ GS G Q PG+VFK KKMAG MG RVT +NL+V Sbjct: 121 FQGAIKRWNFRSQDMTHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGHMGAERVTTQNLDV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LVKG +PGA + ++V+ + K+ Sbjct: 181 VRVDVERNLLLVKGAIPGANGGN-VIVKPAVKA 212 >gi|307628355|gb|ADN72659.1| 50S ribosomal protein L3 [Escherichia coli UM146] Length = 209 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 94/210 (44%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+V+ V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVIRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|146313385|ref|YP_001178459.1| 50S ribosomal protein L3 [Enterobacter sp. 638] gi|166990936|sp|A4WFC8|RL3_ENT38 RecName: Full=50S ribosomal protein L3 gi|145320261|gb|ABP62408.1| LSU ribosomal protein L3P [Enterobacter sp. 638] Length = 209 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 96/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGSKKASRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQDISVELFAEVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSNLIVKPAVKA 209 >gi|224110272|ref|XP_002315468.1| predicted protein [Populus trichocarpa] gi|222864508|gb|EEF01639.1| predicted protein [Populus trichocarpa] Length = 320 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 106/209 (50%), Positives = 143/209 (68%), Gaps = 2/209 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GV+A K GMT +++ G RIP+TVL +D+ V +T++K G+ A+QVG G+ K K++ Sbjct: 74 RTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTVEKEGFFALQVGCGQKKEKHL 133 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F + V K+KL EF V ++ LLPVG+ +F GQ VDV G+T+GKGF Sbjct: 134 TKPEVGHFRAQGVPMKRKLREFPVTEN-ALLPVGTCIGVRHFVPGQFVDVAGITMGKGFQ 192 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F G A+HG S+SHRS GSTG R PG+VFK KKM GRMGG + TVKN+ V Sbjct: 193 GGMKRHGFKGGPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGVQRTVKNVWVYK 252 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 +D R L+ VKG VPGA+ N ++ ++DS Sbjct: 253 IDPARNLMWVKGQVPGAEGN-FVFIKDSV 280 >gi|237749515|ref|ZP_04579995.1| large subunit ribosomal protein L3 [Oxalobacter formigenes OXCC13] gi|229380877|gb|EEO30968.1| large subunit ribosomal protein L3 [Oxalobacter formigenes OXCC13] Length = 222 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 94/216 (43%), Positives = 132/216 (61%), Gaps = 2/216 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GM ++ EG IPVTV+ + + +V +T + +GY AVQV G+ + Sbjct: 5 MSLGLIGRKVGMMRIFTDEGDSIPVTVVDVSDNRVTQVKTTETDGYTAVQVAFGKRRPSR 64 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V L EF V + + G V + F GQ +DV G++IGKG Sbjct: 65 VNKAAAGHFAKAGVEAGTVLREFTVDESKAAEVKAGDVLPATMFEAGQKIDVQGVSIGKG 124 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KRHNF RATHG S+SH GS G QDPGRVF KKM G MG T++NLE+ Sbjct: 125 YAGTIKRHNFASGRATHGNSLSHNVPGSIGMNQDPGRVFPGKKMTGHMGDVTKTIQNLEI 184 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +D +R L+LVKG VPGA KN+ ++VR + K+ V+ Sbjct: 185 ARIDAERNLLLVKGAVPGA-KNAEVIVRPAVKTKVS 219 >gi|329850207|ref|ZP_08265052.1| 50S ribosomal protein L3 [Asticcacaulis biprosthecum C19] gi|328840522|gb|EGF90093.1| 50S ribosomal protein L3 [Asticcacaulis biprosthecum C19] Length = 242 Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 122/219 (55%), Positives = 155/219 (70%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+KLGMT ++ EG +PVTVL LD CQVV RT K+GY+A+Q+GAG K KN Sbjct: 1 MRTGLIAKKLGMTRFFDSEGLHVPVTVLALDGCQVVAQRTQGKDGYVALQLGAGTKKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S P R F+ V PK L EFRV ++ +L+ VG+ F+ +F GQ VD+ G+TIGKGF Sbjct: 61 TSNPERVRFAKAQVEPKAILTEFRVSEE-NLIDVGAEFTADHFVEGQRVDIQGVTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F KKMAG G VT NL V Sbjct: 120 AGAMKRWNFGGLRATHGVSVSHRSHGSTGQRQDPGRTFPGKKMAGHYGVETVTTLNLTVA 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 +D +RGL+ ++G VPGA+ S++ +RD+ K A K Sbjct: 180 RIDAERGLVFIRGAVPGAE-GSYVKIRDAVKKAAPAGLK 217 >gi|15603280|ref|NP_246354.1| 50S ribosomal protein L3 [Pasteurella multocida subsp. multocida str. Pm70] gi|42559689|sp|Q9CL32|RL3_PASMU RecName: Full=50S ribosomal protein L3 gi|12721790|gb|AAK03499.1| RpL3 [Pasteurella multocida subsp. multocida str. Pm70] Length = 209 Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 96/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V RK+GMT ++N +G IPVTV+ ++ +V +T++ +GY A+QV G K V+ Sbjct: 2 IGLVGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTVETDGYSAIQVTTGSKKASRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V + L+EFR + ++ +G + F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFVKAGVEAGRGLWEFRTTEGEEFT-LGQEINVDIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV V Sbjct: 121 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGNERVTVQSLEVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA N ++V+ + K+ Sbjct: 181 DAERKLLLVKGAVPGA-TNGDVIVKPAVKA 209 >gi|118616571|ref|YP_904903.1| 50S ribosomal protein L3 [Mycobacterium ulcerans Agy99] gi|166233167|sp|A0PM63|RL3_MYCUA RecName: Full=50S ribosomal protein L3 gi|118568681|gb|ABL03432.1| 50S ribosomal protein L3 RplC [Mycobacterium ulcerans Agy99] Length = 217 Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 88/214 (41%), Positives = 125/214 (58%), Gaps = 3/214 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ + +PVTV+ V RT +++GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP+ G +++ V+P++ L E R+ + VG + F G VDVTG + GKG Sbjct: 63 NKPVTGQYTAAGVNPRRHLAELRLDDAEAVTEYEVGQELTAEIFADGSYVDVTGTSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV+NL V Sbjct: 123 FAGTMKRHGFSGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD ++ ++L+KG VPG + + VR + K Sbjct: 183 HKVDAEQSVLLIKGAVPG-RTGGLVTVRSAIKRG 215 >gi|313884599|ref|ZP_07818360.1| 50S ribosomal protein L3 [Eremococcus coleocola ACS-139-V-Col8] gi|312620383|gb|EFR31811.1| 50S ribosomal protein L3 [Eremococcus coleocola ACS-139-V-Col8] Length = 210 Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 122/212 (57%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT + G IPVTV+ V+ ++L+ +GY AVQ+G + + Sbjct: 1 MTKGILGKKVGMTQYFTENGELIPVTVVEATPNVVLQVKSLENDGYEAVQLGYQDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EFR + VG + F G ++DVTG + GKGF Sbjct: 61 ATKPHKGHVAKANATPKRFIREFR-NVELGSFEVGQEITVETFEAGDIIDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G D +VFK K + G+ GG +VT++NLEVV Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGMASDASKVFKGKNLPGQTGGEQVTIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +V + LIL+KG VPG KK S + +R + KS Sbjct: 179 AVVAEDNLILIKGNVPGPKK-SLVEIRTAVKS 209 >gi|238916265|ref|YP_002929782.1| large subunit ribosomal protein L3 [Eubacterium eligens ATCC 27750] gi|259647745|sp|C4Z2T0|RL3_EUBE2 RecName: Full=50S ribosomal protein L3 gi|238871625|gb|ACR71335.1| large subunit ribosomal protein L3 [Eubacterium eligens ATCC 27750] Length = 211 Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 89/213 (41%), Positives = 123/213 (57%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G PVTVL C V +T++ +GY AVQVG + + K Sbjct: 1 MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTVENDGYDAVQVGFADIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F V K+ L EF+ + + V F G VD T ++ GKGF Sbjct: 61 VNKPVKGHFDKAEVPYKRFLREFKFENASE-YSVKDEIKADIFAAGDKVDATAISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR HG S HR GS G PGRVFK K M G MG R+T++NLEVV Sbjct: 120 QGAIKRLGQSRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGHMGSKRITIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + +ILVKG VPG KK S + ++++ K+A Sbjct: 179 RVDVENNVILVKGAVPGPKK-SLVTLKETVKAA 210 >gi|163859273|ref|YP_001633571.1| 50S ribosomal protein L3 [Bordetella petrii DSM 12804] gi|212288248|sp|A9IJ01|RL3_BORPD RecName: Full=50S ribosomal protein L3 gi|163263001|emb|CAP45304.1| 50S ribosomal protein L3 [Bordetella petrii] Length = 233 Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 97/216 (44%), Positives = 131/216 (60%), Gaps = 3/216 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+V RK+GMT ++ EG IPVTVL + N +V ++L+ +GY AVQV G + V Sbjct: 16 RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQIKSLEADGYAAVQVAYGTRRASRV 75 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119 ++P G ++ L EFR+ G+V + F GQ VDVTG TIGKG Sbjct: 76 AQPQTGHYAKAGTEAGSILKEFRLDPARLAEFTPGAVIAVESVFEAGQQVDVTGTTIGKG 135 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRH+FG RA+HG S SHR GS G QDPGR+F K+M+G +G TV+NL+V Sbjct: 136 FAGTIKRHHFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMSGHLGDVTRTVQNLDV 195 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 V VD +RGL+LVKG VPG ++VR + K+ Sbjct: 196 VRVDAERGLLLVKGAVPG-HAGGDVVVRPAIKAPAK 230 >gi|260468554|ref|ZP_05813721.1| ribosomal protein L3 [Mesorhizobium opportunistum WSM2075] gi|259028710|gb|EEW30019.1| ribosomal protein L3 [Mesorhizobium opportunistum WSM2075] Length = 237 Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 129/219 (58%), Positives = 163/219 (74%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT +YN G +PVTVL ++NCQVV RT +KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAKKVGMTRIYNDAGEHVPVTVLQMENCQVVAQRTQEKNGYTAVQLGVGLAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK +RG F++ +V PK K+ EFRV D +++ VG+ + +F GQ VDVTG TIGKGF Sbjct: 61 TSKALRGHFATASVEPKAKVAEFRVSAD-NMIDVGAEITVEHFVAGQKVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH+ GG RATHG S+SHR+HGSTG RQDPG+VFK K MAG MG RVT +N+E+V Sbjct: 120 QGVIKRHHMGGGRATHGNSVSHRTHGSTGQRQDPGKVFKGKHMAGHMGDTRVTTQNVEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 S D RGLIL++G VPG+ K +WILVRD+ K A+ Sbjct: 180 STDADRGLILIRGAVPGS-KGAWILVRDAAKVALPANAP 217 >gi|183981053|ref|YP_001849344.1| 50S ribosomal protein L3 RplC [Mycobacterium marinum M] gi|226730539|sp|B2HSN1|RL3_MYCMM RecName: Full=50S ribosomal protein L3 gi|183174379|gb|ACC39489.1| 50S ribosomal protein L3 RplC [Mycobacterium marinum M] Length = 217 Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 89/214 (41%), Positives = 127/214 (59%), Gaps = 3/214 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ + +PVTV+ V RT +++GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP+ G +++ V+P++ L E R+ + VG + F G VDVTG + GKG Sbjct: 63 NKPVTGQYTAAGVNPRRHLAELRLDDAEAVTEYEVGQELTAEIFADGSYVDVTGTSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV+NL V Sbjct: 123 FAGTMKRHGFSGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD ++G++L+KG VPG + ++VR + K Sbjct: 183 HKVDAEQGVLLIKGAVPG-RTGGLVMVRSAIKRG 215 >gi|238758764|ref|ZP_04619938.1| 50S ribosomal protein L3 [Yersinia aldovae ATCC 35236] gi|238703061|gb|EEP95604.1| 50S ribosomal protein L3 [Yersinia aldovae ATCC 35236] Length = 209 Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 129/210 (61%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTTGSKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ + + G S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLAEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG MG RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHMGDERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA + I V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGATGGNLI-VKPAVKA 209 >gi|256025952|ref|ZP_05439817.1| 50S ribosomal protein L3 [Escherichia sp. 4_1_40B] Length = 209 Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLTNDGYRAIQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|330430101|gb|AEC21435.1| 50S ribosomal protein L3 [Pusillimonas sp. T7-7] Length = 229 Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats. Identities = 100/216 (46%), Positives = 135/216 (62%), Gaps = 3/216 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+V RK+GMT ++ EG IPVTVL + N +V ++ + +GY AVQV G + V Sbjct: 12 RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQVKSPETDGYAAVQVAYGTRRASRV 71 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119 +KP G ++ L EFR+ G+V + F GQ VDVTG TIGKG Sbjct: 72 TKPQAGHYAKAGAEAGSILKEFRLDPAKAAEFTAGAVVAVESVFEAGQKVDVTGTTIGKG 131 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KRH+F G R +HG S+SHR+ GSTG QDPGRVF KKM+G +G TV+NL++ Sbjct: 132 YAGTIKRHHFAGQRNSHGNSVSHRAPGSTGMAQDPGRVFPGKKMSGHLGDATRTVQNLDI 191 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 V VD +RGL+LVKG VPG KN+ I+VR + K + Sbjct: 192 VRVDAERGLLLVKGAVPG-HKNADIVVRPAIKMSAK 226 >gi|120402316|ref|YP_952145.1| 50S ribosomal protein L3 [Mycobacterium vanbaalenii PYR-1] gi|166233168|sp|A1T4N9|RL3_MYCVP RecName: Full=50S ribosomal protein L3 gi|119955134|gb|ABM12139.1| LSU ribosomal protein L3P [Mycobacterium vanbaalenii PYR-1] Length = 218 Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats. Identities = 87/217 (40%), Positives = 127/217 (58%), Gaps = 3/217 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ + +PVTV+ V RT +++GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP+ G +++ V+P++ L E R+ + VG + F G VDVTG + GKG Sbjct: 63 NKPVTGQYAAAGVNPRRHLAELRLDDEAAAAEYEVGQELTAEIFADGAYVDVTGTSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKRH F G A+HG HR GS G PGRVFK +M+GRMG +RVT +NL+V Sbjct: 123 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGSDRVTTQNLKV 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 VD + G++L+KG +PG + ++VR + K Sbjct: 183 HKVDAENGVLLIKGAIPG-RNGGLVVVRSAIKRGEKA 218 >gi|41410259|ref|NP_963095.1| 50S ribosomal protein L3 [Mycobacterium avium subsp. paratuberculosis K-10] gi|118463063|ref|YP_883606.1| 50S ribosomal protein L3 [Mycobacterium avium 104] gi|254776907|ref|ZP_05218423.1| 50S ribosomal protein L3 [Mycobacterium avium subsp. avium ATCC 25291] gi|81831570|sp|Q73SB3|RL3_MYCPA RecName: Full=50S ribosomal protein L3 gi|166233161|sp|A0QL18|RL3_MYCA1 RecName: Full=50S ribosomal protein L3 gi|41399093|gb|AAS06711.1| RplC [Mycobacterium avium subsp. paratuberculosis K-10] gi|118164350|gb|ABK65247.1| ribosomal protein L3 [Mycobacterium avium 104] Length = 217 Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats. Identities = 91/214 (42%), Positives = 127/214 (59%), Gaps = 3/214 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ R +PVTV+ V RT +++GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTPEQDGYSAVQLAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP+ G +++ ++P++ L E R+ D VG + FT G VDVTG + GKG Sbjct: 63 NKPVTGQYAAAGINPRRFLAELRLDNPDAAAEYQVGQELTAEIFTDGSYVDVTGTSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV+NL V Sbjct: 123 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + G++L+KG VPG + ++VR + K Sbjct: 183 HKVDTENGVLLIKGAVPG-RTGGLVMVRSAVKRG 215 >gi|317401537|gb|EFV82166.1| 50S ribosomal protein L3 [Achromobacter xylosoxidans C54] Length = 229 Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats. Identities = 98/216 (45%), Positives = 130/216 (60%), Gaps = 3/216 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+V RK+GMT ++ EG IPVTVL + N +V ++L+ +GY A+QV G + V Sbjct: 12 RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQVKSLETDGYAAIQVAYGTRRASRV 71 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119 + G ++ L EFR+ G+V + F GQ VDVTG TIGKG Sbjct: 72 PQAQTGHYAKAGAEAGSILKEFRLDPARAAEFSAGAVIAVESVFEAGQQVDVTGTTIGKG 131 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRHNFG RA+HG S SHR GS G QDPGR+F K+MAG +G TV+NL+V Sbjct: 132 FAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMAGHLGDVTRTVQNLDV 191 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 V VD +RGL+LVKG VPG + I+VR + K+ Sbjct: 192 VRVDVERGLLLVKGAVPG-HAGADIVVRPAIKAPAK 226 >gi|304399291|ref|ZP_07381157.1| 50S ribosomal protein L3 [Pantoea sp. aB] gi|308188357|ref|YP_003932488.1| 50S ribosomal protein L3 [Pantoea vagans C9-1] gi|304353217|gb|EFM17598.1| 50S ribosomal protein L3 [Pantoea sp. aB] gi|308058867|gb|ADO11039.1| 50S ribosomal protein L3 [Pantoea vagans C9-1] Length = 209 Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats. Identities = 94/210 (44%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L+ +GY A+QV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKGLENDGYQAIQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR + ++ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRTAEGEE-YSVGQSISVEIFAEVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|308376477|ref|ZP_07438983.2| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu008] gi|308350981|gb|EFP39832.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu008] Length = 221 Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats. Identities = 91/214 (42%), Positives = 125/214 (58%), Gaps = 3/214 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ R +PVTV+ V RT +++GY AVQ+ GE + V Sbjct: 7 RKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP+ G +++ V+P++ L E R+ D VG + F G VDVTG + GKG Sbjct: 67 NKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKG 126 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV NL V Sbjct: 127 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLV 186 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + G++L+KG VPG + ++VR + K Sbjct: 187 HKVDAENGVLLIKGAVPG-RTGGLVMVRSAIKRG 219 >gi|113869431|ref|YP_727920.1| 50S ribosomal protein L3 [Ralstonia eutropha H16] gi|194291022|ref|YP_002006929.1| 50S ribosomal protein l3 [Cupriavidus taiwanensis LMG 19424] gi|123133539|sp|Q0K619|RL3_RALEH RecName: Full=50S ribosomal protein L3 gi|226725158|sp|B3R7S3|RL3_CUPTR RecName: Full=50S ribosomal protein L3 gi|113528207|emb|CAJ94552.1| LSU ribosomal protein L3 [Ralstonia eutropha H16] gi|193224857|emb|CAQ70868.1| 50S ribosomal subunit protein L3 [Cupriavidus taiwanensis LMG 19424] Length = 216 Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats. Identities = 90/217 (41%), Positives = 129/217 (59%), Gaps = 2/217 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ + + +V +T + +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTDDGEAIPVTVVEVGDNRVTQIKTDETDGYTAVQVTFGARRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + + EFR+ L G S F VGQ +DV G+TIGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEIIREFRIDAAKAAELQAGGSLSVDLFEVGQKIDVQGVTIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR++F RATHG S SH GS G QDPGRVF K+M G +G TV+NLE+ Sbjct: 121 YAGTIKRYHFASGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTRTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 +D +R L+LVKG +PG+ KN ++V + K+ Sbjct: 181 AKIDAERKLLLVKGAIPGS-KNGKVIVTPAVKAKAKA 216 >gi|52426103|ref|YP_089240.1| 50S ribosomal protein L3 [Mannheimia succiniciproducens MBEL55E] gi|81825476|sp|Q65QV5|RL3_MANSM RecName: Full=50S ribosomal protein L3 gi|52308155|gb|AAU38655.1| RplC protein [Mannheimia succiniciproducens MBEL55E] Length = 208 Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats. Identities = 99/210 (47%), Positives = 131/210 (62%), Gaps = 3/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V RK+GMT ++ EG IPVTV+ ++ +V +TL+ +GY AVQV G K V+ Sbjct: 2 IGLVGRKVGMTRIFTEEGVSIPVTVIEIEANRVTQVKTLENDGYSAVQVTTGSKKASRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V + L+EFR + + +G + F + VDVTG + GKGF G Sbjct: 62 KPEAGHFVKAGVEAGRGLWEFRTEG--EEFTLGQEINVDIFADVKKVDVTGTSKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV V Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA NS ++V+ + K+ Sbjct: 180 DAERKLLLVKGAVPGA-TNSDVIVKPAVKA 208 >gi|152978141|ref|YP_001343770.1| 50S ribosomal protein L3 [Actinobacillus succinogenes 130Z] gi|171472958|sp|A6VLI8|RL3_ACTSZ RecName: Full=50S ribosomal protein L3 gi|150839864|gb|ABR73835.1| ribosomal protein L3 [Actinobacillus succinogenes 130Z] Length = 208 Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats. Identities = 99/210 (47%), Positives = 131/210 (62%), Gaps = 3/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY AVQV G K V+ Sbjct: 2 IGLVGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKASRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V + L+EFR + + +G + F + VDVTG + GKGF G Sbjct: 62 KPEAGHFVKAGVEAGRGLWEFRTEG--EEFTLGQEINVDIFADVKKVDVTGTSKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV V Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA NS ++V+ + K+ Sbjct: 180 DAERKLLLVKGAVPGA-TNSDVIVKPAVKA 208 >gi|284923326|emb|CBG36420.1| 50S ribosomal subunit protein L3 [Escherichia coli 042] Length = 209 Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 134/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K +V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANSVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|227505216|ref|ZP_03935265.1| 50S ribosomal protein L3 [Corynebacterium striatum ATCC 6940] gi|227198190|gb|EEI78238.1| 50S ribosomal protein L3 [Corynebacterium striatum ATCC 6940] Length = 218 Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats. Identities = 82/214 (38%), Positives = 121/214 (56%), Gaps = 2/214 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +KLGMT +++ + R +PVTV+ C V RT + +GY A+Q+ GE + + Sbjct: 7 KGILGKKLGMTQIFDEDNRVVPVTVVEAGPCVVTQIRTAETDGYNAIQIAFGEIDPRKAN 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P++ + E R+ D VG + F VDVTG T G G++G Sbjct: 67 KPAAGHFKKAGVTPRRHVAEIRMD-DTSAYEVGQEVTADIFEGITFVDVTGTTKGHGYAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRH F G A HG +HR G G P RVFK +MAGRMG +RVT +NL++ + Sbjct: 126 AMKRHGFAGQGAAHGNQAAHRRVGGIGACATPARVFKGTRMAGRMGQDRVTTQNLKIQKI 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D + L+L+KG +PGA + + V+ + K + Sbjct: 186 DAESNLLLIKGAIPGA-RGGLVTVKTAVKGGAHA 218 >gi|229825321|ref|ZP_04451390.1| hypothetical protein GCWU000182_00675 [Abiotrophia defectiva ATCC 49176] gi|229790693|gb|EEP26807.1| hypothetical protein GCWU000182_00675 [Abiotrophia defectiva ATCC 49176] Length = 211 Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats. Identities = 91/211 (43%), Positives = 126/211 (59%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++ +G IPVTVL D V +T++ +GY AVQVG G+ + Sbjct: 1 MKKAILATKIGMTQIFAEDGSLIPVTVLKADPAVVTQVKTVENDGYSAVQVGFGDIRENL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G F+ V K+ L EF++ +D + G F G VD T + GKGF Sbjct: 61 VNKPKKGHFAKAGVPVKRFLREFKL-EDAENYKAGDEIKSDVFAAGDKVDATATSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+ RH HG S HR GS G DP +VFK KKMAG MG +VTV+NLEVV Sbjct: 120 QGAIHRHGLHRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKKMAGHMGHVKVTVQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD ++ LILVKG VPGAKK + ++++ + + Sbjct: 179 RVDAEKNLILVKGAVPGAKK-ALVMLKSTTR 208 >gi|74313839|ref|YP_312258.1| 50S ribosomal protein L3 [Shigella sonnei Ss046] gi|109893556|sp|Q3YWT9|RL3_SHISS RecName: Full=50S ribosomal protein L3 gi|73857316|gb|AAZ90023.1| 50S ribosomal subunit protein L3 [Shigella sonnei Ss046] Length = 209 Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 132/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V+ Sbjct: 2 IGLVGKKAGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFAEVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|212274775|ref|NP_001130722.1| hypothetical protein LOC100191826 [Zea mays] gi|195627984|gb|ACG35822.1| 50S ribosomal protein L3-2 [Zea mays] Length = 318 Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats. Identities = 104/209 (49%), Positives = 145/209 (69%), Gaps = 2/209 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GV+ K GM+ +++ G ++P+TVL +D+ V +T +K G+ A+Q+GAG+ K K++ Sbjct: 71 RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVTQVKTAEKEGFFALQLGAGQKKEKHL 130 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F + V K+KL EF V +D LLPVG+ + +F GQ VDVTG+T GKGF+ Sbjct: 131 TKPEVGHFRAQGVPLKRKLREFPVTED-ALLPVGTSITVRHFVPGQFVDVTGITKGKGFA 189 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR+ FGG A+HG S++HRS GSTG R PGRVFKN+KM GRMGG + TVKN+ V Sbjct: 190 GVMKRYGFGGXPASHGTSLAHRSGGSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 249 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 +D R L+ +KG VPG + S+I V+DS Sbjct: 250 IDPARNLLYLKGQVPGPQ-GSFIFVKDSI 277 >gi|255067458|ref|ZP_05319313.1| 50S ribosomal protein L3 [Neisseria sicca ATCC 29256] gi|255048253|gb|EET43717.1| 50S ribosomal protein L3 [Neisseria sicca ATCC 29256] Length = 238 Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats. Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 25 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 84 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG Sbjct: 85 VNKAEAGHFAKAGVEAGRGLIEFALAEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 144 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 145 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 204 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPGA NS ++VR S K Sbjct: 205 VRVDAERQLLLVKGAVPGAV-NSDVVVRPSVK 235 >gi|294638052|ref|ZP_06716312.1| 50S ribosomal protein L3 [Edwardsiella tarda ATCC 23685] gi|291088844|gb|EFE21405.1| 50S ribosomal protein L3 [Edwardsiella tarda ATCC 23685] Length = 209 Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats. Identities = 94/210 (44%), Positives = 131/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + LD +GY A+QV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLDNDGYRAIQVTTGSKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L EFR+ + ++ +G S F + VDVTG++ GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRVLREFRLSEGEEFT-IGQNISVEIFADVKKVDVTGISKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG +G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA I V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGATGGDLI-VKPAVKA 209 >gi|78044555|ref|YP_361118.1| 50S ribosomal protein L3 [Carboxydothermus hydrogenoformans Z-2901] gi|109893418|sp|Q3A9R6|RL3_CARHZ RecName: Full=50S ribosomal protein L3 gi|77996670|gb|ABB15569.1| ribosomal protein L3 [Carboxydothermus hydrogenoformans Z-2901] Length = 209 Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats. Identities = 94/212 (44%), Positives = 134/212 (63%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +GR IPVTV+ C VV +T+ +GY A+Q+G GE K Sbjct: 1 MPKGILGRKVGMTQIFTEDGRAIPVTVIEAGPCVVVQKKTIANDGYNAIQLGFGEIKESK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F+ NV P + L E RV+ D VG FTVG+ VDVTG++ GKGF Sbjct: 61 VNKPLKGHFNRANVKPMRYLREIRVENIDA-YEVGQEIKVDIFTVGEKVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH F HG S HR GS G + P RVF +K+ GR+G RVT++NLEVV Sbjct: 120 AGGIKRHGFHRGPMAHG-SKYHRRPGSLGAKG-PARVFLGRKLPGRLGMERVTIQNLEVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+++KG VPG + S ++++++ K Sbjct: 178 KVDPERNLLVIKGSVPG-IRGSLLIIKEAVKG 208 >gi|160941069|ref|ZP_02088407.1| hypothetical protein CLOBOL_05962 [Clostridium bolteae ATCC BAA-613] gi|158436018|gb|EDP13785.1| hypothetical protein CLOBOL_05962 [Clostridium bolteae ATCC BAA-613] Length = 226 Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats. Identities = 89/211 (42%), Positives = 121/211 (57%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N G +PVTVL C V +T + +GY AVQVG + + K Sbjct: 16 MKKAILATKVGMTQIFNENGALVPVTVLQAGPCVVTQVKTAENDGYKAVQVGFVDKRDKL 75 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKP +G F VS K+ + EF+ + ++ V F G +D T ++ GKGF Sbjct: 76 VSKPQKGHFDKAGVSYKRYVREFKFENAEE-YSVKDEIKADIFAAGDKIDATAISKGKGF 134 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR+ HG S HR GS G PGRVFK K M G MG ++TV+NLEVV Sbjct: 135 QGAIKRYGQHRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGHMGSKQITVQNLEVV 193 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD LILVKG VPG KK S + ++++ K Sbjct: 194 KVDVDNNLILVKGAVPGPKK-SLVTIKETVK 223 >gi|50843318|ref|YP_056545.1| 50S ribosomal protein L3 [Propionibacterium acnes KPA171202] gi|289427657|ref|ZP_06429369.1| 50S ribosomal protein L3 [Propionibacterium acnes J165] gi|295131387|ref|YP_003582050.1| 50S ribosomal protein L3 [Propionibacterium acnes SK137] gi|81826389|sp|Q6A6M6|RL3_PROAC RecName: Full=50S ribosomal protein L3 gi|50840920|gb|AAT83587.1| 50S ribosomal protein L3 [Propionibacterium acnes KPA171202] gi|289159148|gb|EFD07340.1| 50S ribosomal protein L3 [Propionibacterium acnes J165] gi|291377388|gb|ADE01243.1| 50S ribosomal protein L3 [Propionibacterium acnes SK137] gi|313773097|gb|EFS39063.1| 50S ribosomal protein L3 [Propionibacterium acnes HL074PA1] gi|313808839|gb|EFS47293.1| 50S ribosomal protein L3 [Propionibacterium acnes HL087PA2] gi|313810367|gb|EFS48081.1| 50S ribosomal protein L3 [Propionibacterium acnes HL083PA1] gi|313812297|gb|EFS50011.1| 50S ribosomal protein L3 [Propionibacterium acnes HL025PA1] gi|313818019|gb|EFS55733.1| 50S ribosomal protein L3 [Propionibacterium acnes HL046PA2] gi|313819932|gb|EFS57646.1| 50S ribosomal protein L3 [Propionibacterium acnes HL036PA1] gi|313823422|gb|EFS61136.1| 50S ribosomal protein L3 [Propionibacterium acnes HL036PA2] gi|313824894|gb|EFS62608.1| 50S ribosomal protein L3 [Propionibacterium acnes HL063PA1] gi|313830136|gb|EFS67850.1| 50S ribosomal protein L3 [Propionibacterium acnes HL007PA1] gi|313832593|gb|EFS70307.1| 50S ribosomal protein L3 [Propionibacterium acnes HL056PA1] gi|314925788|gb|EFS89619.1| 50S ribosomal protein L3 [Propionibacterium acnes HL036PA3] gi|314960868|gb|EFT04969.1| 50S ribosomal protein L3 [Propionibacterium acnes HL002PA2] gi|314973015|gb|EFT17111.1| 50S ribosomal protein L3 [Propionibacterium acnes HL053PA1] gi|314975511|gb|EFT19606.1| 50S ribosomal protein L3 [Propionibacterium acnes HL045PA1] gi|314979747|gb|EFT23841.1| 50S ribosomal protein L3 [Propionibacterium acnes HL072PA2] gi|314986053|gb|EFT30145.1| 50S ribosomal protein L3 [Propionibacterium acnes HL005PA2] gi|314988669|gb|EFT32760.1| 50S ribosomal protein L3 [Propionibacterium acnes HL005PA3] gi|315079850|gb|EFT51826.1| 50S ribosomal protein L3 [Propionibacterium acnes HL078PA1] gi|315083218|gb|EFT55194.1| 50S ribosomal protein L3 [Propionibacterium acnes HL027PA2] gi|315086828|gb|EFT58804.1| 50S ribosomal protein L3 [Propionibacterium acnes HL002PA3] gi|315089921|gb|EFT61897.1| 50S ribosomal protein L3 [Propionibacterium acnes HL072PA1] gi|315096757|gb|EFT68733.1| 50S ribosomal protein L3 [Propionibacterium acnes HL038PA1] gi|315106073|gb|EFT78049.1| 50S ribosomal protein L3 [Propionibacterium acnes HL030PA1] gi|327325171|gb|EGE66977.1| 50S ribosomal protein L3 [Propionibacterium acnes HL096PA3] gi|327325199|gb|EGE67004.1| 50S ribosomal protein L3 [Propionibacterium acnes HL096PA2] gi|327444000|gb|EGE90654.1| 50S ribosomal protein L3 [Propionibacterium acnes HL043PA1] gi|327449372|gb|EGE96026.1| 50S ribosomal protein L3 [Propionibacterium acnes HL013PA2] gi|327449400|gb|EGE96054.1| 50S ribosomal protein L3 [Propionibacterium acnes HL043PA2] gi|328756283|gb|EGF69899.1| 50S ribosomal protein L3 [Propionibacterium acnes HL020PA1] gi|328761383|gb|EGF74910.1| 50S ribosomal protein L3 [Propionibacterium acnes HL099PA1] Length = 223 Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats. Identities = 102/213 (47%), Positives = 131/213 (61%), Gaps = 2/213 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGMT +++ R +PVTV+ C V RT + +GY AVQ+G G K KNV+ Sbjct: 8 KGVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKNVT 67 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P++ L E R D +G + F+ VDVTG + GKG +G Sbjct: 68 KPEAGHFEKAGVTPRRHLVELR-TADASEYTLGQEIAADVFSESDFVDVTGTSKGKGTAG 126 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGGLRATHGV HRS GS G PG+V K +MAGRMG RVTV+NL+V SV Sbjct: 127 VMKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQNLQVHSV 186 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D +RG++LV+G VPG K S ++VR + K A Sbjct: 187 DAERGIMLVRGAVPGP-KGSLLVVRSAAKKAAK 218 >gi|257866529|ref|ZP_05646182.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC30] gi|257870517|ref|ZP_05650170.1| 50S ribosomal protein L3 [Enterococcus gallinarum EG2] gi|257872956|ref|ZP_05652609.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC10] gi|257876133|ref|ZP_05655786.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC20] gi|325567376|ref|ZP_08144043.1| 50S ribosomal protein L3 [Enterococcus casseliflavus ATCC 12755] gi|257800487|gb|EEV29515.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC30] gi|257804681|gb|EEV33503.1| 50S ribosomal protein L3 [Enterococcus gallinarum EG2] gi|257807120|gb|EEV35942.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC10] gi|257810299|gb|EEV39119.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC20] gi|325158809|gb|EGC70955.1| 50S ribosomal protein L3 [Enterococcus casseliflavus ATCC 12755] Length = 209 Score = 263 bits (674), Expect = 8e-69, Method: Composition-based stats. Identities = 90/212 (42%), Positives = 131/212 (61%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQVKTIENDGYEAIQVGYQDMREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF+ + + L VGS F G ++DVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFK-NVELEGLEVGSEIKVDIFEAGDIIDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK++AGRMGGNR+T++NLE+V Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRITIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R +IL+KG VPGAKK S I ++ + K+ Sbjct: 178 RVDAERNVILIKGNVPGAKK-SLITIKSAVKA 208 >gi|254362074|ref|ZP_04978199.1| ribosomal protein L3 [Mannheimia haemolytica PHL213] gi|261493009|ref|ZP_05989551.1| ribosomal protein L3 [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495171|ref|ZP_05991634.1| ribosomal protein L3 [Mannheimia haemolytica serotype A2 str. OVINE] gi|153093630|gb|EDN74595.1| ribosomal protein L3 [Mannheimia haemolytica PHL213] gi|261309147|gb|EEY10387.1| ribosomal protein L3 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311353|gb|EEY12514.1| ribosomal protein L3 [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 209 Score = 263 bits (674), Expect = 8e-69, Method: Composition-based stats. Identities = 97/210 (46%), Positives = 132/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV G K V+ Sbjct: 2 IGLIGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDGYSAIQVTTGSKKASRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V + L+EFR + ++ +G + FT + VDVTG + GKGF G Sbjct: 62 KPEAGHFVKAGVEAGRGLWEFRTTEGEEFT-LGQEINVDIFTDVKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV V Sbjct: 121 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA N ++V+ + K+ Sbjct: 181 DVERKLLLVKGAVPGA-TNGDVIVKPAVKA 209 >gi|289424800|ref|ZP_06426582.1| 50S ribosomal protein L3 [Propionibacterium acnes SK187] gi|289154763|gb|EFD03446.1| 50S ribosomal protein L3 [Propionibacterium acnes SK187] gi|313763238|gb|EFS34602.1| 50S ribosomal protein L3 [Propionibacterium acnes HL013PA1] gi|313793258|gb|EFS41316.1| 50S ribosomal protein L3 [Propionibacterium acnes HL110PA1] gi|313801098|gb|EFS42366.1| 50S ribosomal protein L3 [Propionibacterium acnes HL110PA2] gi|313828364|gb|EFS66078.1| 50S ribosomal protein L3 [Propionibacterium acnes HL063PA2] gi|313837949|gb|EFS75663.1| 50S ribosomal protein L3 [Propionibacterium acnes HL086PA1] gi|314914332|gb|EFS78163.1| 50S ribosomal protein L3 [Propionibacterium acnes HL005PA4] gi|314917652|gb|EFS81483.1| 50S ribosomal protein L3 [Propionibacterium acnes HL050PA1] gi|314919616|gb|EFS83447.1| 50S ribosomal protein L3 [Propionibacterium acnes HL050PA3] gi|314930207|gb|EFS94038.1| 50S ribosomal protein L3 [Propionibacterium acnes HL067PA1] gi|314957186|gb|EFT01290.1| 50S ribosomal protein L3 [Propionibacterium acnes HL027PA1] gi|314957762|gb|EFT01865.1| 50S ribosomal protein L3 [Propionibacterium acnes HL002PA1] gi|314963542|gb|EFT07642.1| 50S ribosomal protein L3 [Propionibacterium acnes HL082PA1] gi|314969875|gb|EFT13973.1| 50S ribosomal protein L3 [Propionibacterium acnes HL037PA1] gi|315077165|gb|EFT49232.1| 50S ribosomal protein L3 [Propionibacterium acnes HL053PA2] gi|315100628|gb|EFT72604.1| 50S ribosomal protein L3 [Propionibacterium acnes HL046PA1] gi|315109232|gb|EFT81208.1| 50S ribosomal protein L3 [Propionibacterium acnes HL030PA2] gi|327451421|gb|EGE98075.1| 50S ribosomal protein L3 [Propionibacterium acnes HL087PA3] gi|327451604|gb|EGE98258.1| 50S ribosomal protein L3 [Propionibacterium acnes HL092PA1] gi|327451891|gb|EGE98545.1| 50S ribosomal protein L3 [Propionibacterium acnes HL083PA2] gi|328752105|gb|EGF65721.1| 50S ribosomal protein L3 [Propionibacterium acnes HL087PA1] gi|328755499|gb|EGF69115.1| 50S ribosomal protein L3 [Propionibacterium acnes HL025PA2] Length = 223 Score = 263 bits (674), Expect = 8e-69, Method: Composition-based stats. Identities = 101/213 (47%), Positives = 130/213 (61%), Gaps = 2/213 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGMT +++ R +PVTV+ C V RT + +GY AVQ+G G K KNV+ Sbjct: 8 KGVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKNVT 67 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P++ L E R D +G + F+ VDVT + GKG +G Sbjct: 68 KPEAGHFEKAGVTPRRHLVELR-TADASEYTLGQEIAADVFSESDFVDVTATSKGKGTAG 126 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGGLRATHGV HRS GS G PG+V K +MAGRMG RVTV+NL+V SV Sbjct: 127 VMKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQNLQVHSV 186 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D +RG++LV+G VPG K S ++VR + K A Sbjct: 187 DAERGIMLVRGAVPGP-KGSLLVVRSAAKKAAK 218 >gi|304315940|ref|YP_003851085.1| 50S ribosomal protein L3 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777442|gb|ADL68001.1| 50S ribosomal protein L3 [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 209 Score = 263 bits (674), Expect = 8e-69, Method: Composition-based stats. Identities = 94/212 (44%), Positives = 129/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K GMT ++ + IPVTV+ C VV +T + +GY A+QVG G+ K K Sbjct: 1 MKKAILGKKHGMTQIF-VGNEMIPVTVVEAGPCVVVQKKTKENDGYDAIQVGFGDVKEKR 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + KP++G F+ NV KK L EFR+ D VGS F+VG VDV G + GKGF Sbjct: 60 LIKPLKGHFTKANVPFKKYLREFRLD-DISSYEVGSEIKADIFSVGDRVDVIGTSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR+N HG S HR GS G DP R FK K++ G MG RVTV+NLEVV Sbjct: 119 AGVVKRYNANRGPMAHG-SKYHRRPGSMGASSDPSRTFKGKRLPGHMGNERVTVQNLEVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++ L+L+KG VPG + S +++RD+ KS Sbjct: 178 KVDPEKNLLLIKGSVPG-IRGSLLMIRDTVKS 208 >gi|182678337|ref|YP_001832483.1| 50S ribosomal protein L3 [Beijerinckia indica subsp. indica ATCC 9039] gi|226725134|sp|B2IK62|RL3_BEII9 RecName: Full=50S ribosomal protein L3 gi|182634220|gb|ACB94994.1| ribosomal protein L3 [Beijerinckia indica subsp. indica ATCC 9039] Length = 240 Score = 263 bits (674), Expect = 8e-69, Method: Composition-based stats. Identities = 139/220 (63%), Positives = 161/220 (73%), Gaps = 2/220 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT V+ G IPVTVL LD CQVV HRT ++NGY+AVQ+G G AKVKN Sbjct: 1 MRSGVIAQKLGMTRVFTDAGEHIPVTVLKLDGCQVVGHRTKEQNGYVAVQLGIGRAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK RG F+ V PK KL EFRV D LLP+G+ + +F VGQ VDVTG + GKGF Sbjct: 61 VSKAERGRFAVAKVEPKLKLAEFRVD-DATLLPIGAEITADHFVVGQFVDVTGTSTGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NFGGLRATHGVSISHRSHGSTG RQDPG+ FKNKKMAG +G RVT NL VV Sbjct: 120 AGAMKRWNFGGLRATHGVSISHRSHGSTGGRQDPGKTFKNKKMAGHLGTERVTTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220 D +RGLILV+G VPG WI VRD+ K + + + Sbjct: 180 QTDVERGLILVEGAVPGTA-GGWIYVRDAVKKHLPKEAPL 218 >gi|300857246|ref|YP_003782230.1| 50S ribosomal protein L3 [Clostridium ljungdahlii DSM 13528] gi|300437361|gb|ADK17128.1| 50S ribosomal protein L3 [Clostridium ljungdahlii DSM 13528] Length = 209 Score = 263 bits (674), Expect = 8e-69, Method: Composition-based stats. Identities = 89/212 (41%), Positives = 127/212 (59%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ RKLGMT ++N G+ IPVTV+ C V+ +T++K+GY AVQVG + + K Sbjct: 1 MKKAILGRKLGMTQIFNENGKVIPVTVIEAGPCAVIQKKTVEKDGYEAVQVGFSDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+G F V+ K+ + EF+++ + G FT G VDV+G++ GKGF Sbjct: 61 VNKPMKGHFEKAGVTLKRFIKEFKLENASEYKE-GQEIKADVFTAGDKVDVSGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR N +HG S HR+ GS G DP R FKN KMAG MG TV NLEV Sbjct: 120 QGTIKRWNAQRGPMSHG-SKFHRAPGSMGACSDPSRTFKNMKMAGHMGNRNTTVLNLEVA 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ +IL+KG VPG K + +R++ K+ Sbjct: 179 KVIPEKNIILIKGGVPGPNKG-LVAIRNTVKA 209 >gi|117927515|ref|YP_872066.1| 50S ribosomal protein L3P [Acidothermus cellulolyticus 11B] gi|212288244|sp|A0LRM0|RL3_ACIC1 RecName: Full=50S ribosomal protein L3 gi|117647978|gb|ABK52080.1| LSU ribosomal protein L3P [Acidothermus cellulolyticus 11B] Length = 222 Score = 263 bits (674), Expect = 8e-69, Method: Composition-based stats. Identities = 100/219 (45%), Positives = 130/219 (59%), Gaps = 2/219 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ GR IPVTV+ C V RT D++GY AVQ+G G + V+ Sbjct: 6 KGLLGEKLGMTQVFDESGRVIPVTVVRAGPCVVTQVRTPDRDGYSAVQLGYGAVDPRRVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F + V+P++ L E R D VG + FT GQ VDV G++ GKGF+G Sbjct: 66 KPLAGHFRAAGVTPRRYLAEVR-TGDAAEYTVGQEVTVEIFTPGQRVDVAGVSKGKGFAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF GL +HG HRS GS G PGRVFK +MAGRMGG RVTV+NL V +V Sbjct: 125 LMKRHNFRGLPDSHGTERKHRSPGSIGACATPGRVFKGLRMAGRMGGRRVTVQNLAVQAV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 + L+L++G VPG + VR + K N G + Sbjct: 185 KPEENLLLLQGAVPGPN-GGLVYVRTAAKGKANRDGGAA 222 >gi|229823535|ref|ZP_04449604.1| hypothetical protein GCWU000282_00833 [Catonella morbi ATCC 51271] gi|229786979|gb|EEP23093.1| hypothetical protein GCWU000282_00833 [Catonella morbi ATCC 51271] Length = 211 Score = 263 bits (674), Expect = 8e-69, Method: Composition-based stats. Identities = 85/211 (40%), Positives = 124/211 (58%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT + G +PVTV+ V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGKKVGMTQFFTENGELVPVTVIEATPNVVLQVKTMENDGYEAVQLGFQDLREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EFR + + VG + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANATPKRFIREFR-EVELGEYQVGQEITVETFAAGDIVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G P RVFK K + G+ GG RVT++NLEVV Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGGASFPSRVFKGKGLPGQTGGERVTIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +VD + +IL+KG VPGAKK S + ++ + K Sbjct: 179 AVDVENNVILIKGNVPGAKK-SLVEIKQAIK 208 >gi|34499641|ref|NP_903856.1| 50S ribosomal protein L3 [Chromobacterium violaceum ATCC 12472] gi|42559595|sp|Q7NQF2|RL3_CHRVO RecName: Full=50S ribosomal protein L3 gi|34105491|gb|AAQ61846.1| 50S ribosomal protein L3 [Chromobacterium violaceum ATCC 12472] Length = 214 Score = 263 bits (674), Expect = 8e-69, Method: Composition-based stats. Identities = 103/215 (47%), Positives = 131/215 (60%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTVL + + +V +T + +GY AVQV G K Sbjct: 1 MSLGLVGRKVGMTRIFAEDGATIPVTVLDMSSNRVTQIKTAETDGYNAVQVTYGSKKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V L EF + D G + FTVGQLVDVTG + GKG Sbjct: 61 VNKADAGHFAKAGVEAGLGLAEFALSADALSNFKPGDAIAVEIFTVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNF RA+HG S SH + GS G QDPGRVF K+MAG+ G + TV+ LE+ Sbjct: 121 FSGVIKRHNFSSNRASHGNSRSHNTPGSIGQAQDPGRVFPGKRMAGQYGNVKSTVQCLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 V VD +R LILVKG VPGA KN ++VR S K+ Sbjct: 181 VRVDAERQLILVKGAVPGA-KNGDVVVRPSVKAGA 214 >gi|300022541|ref|YP_003755152.1| 50S ribosomal protein L3 [Hyphomicrobium denitrificans ATCC 51888] gi|299524362|gb|ADJ22831.1| 50S ribosomal protein L3 [Hyphomicrobium denitrificans ATCC 51888] Length = 233 Score = 263 bits (674), Expect = 8e-69, Method: Composition-based stats. Identities = 121/216 (56%), Positives = 157/216 (72%), Gaps = 2/216 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT ++ G +PVTVL L+N QV+ HRT++KNGY A+QVG G K Sbjct: 1 MRSGVIAQKVGMTRIFTDAGEHVPVTVLRLENLQVLSHRTVEKNGYTAIQVGGGTRKPSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++K RG F+ V PK+K+ EFRV + +L+ VG+ + +F GQ VDVTG T GKGF Sbjct: 61 LTKADRGTFAKAEVEPKRKIAEFRVSPE-NLIDVGAEITADHFVPGQFVDVTGTTQGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GAMKR NFGGLRATHGVS++HR+HGSTG RQDPG+VFK KKMAG +G RVT +NL V Sbjct: 120 QGAMKRWNFGGLRATHGVSVTHRAHGSTGQRQDPGKVFKGKKMAGHLGDERVTTQNLVVA 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 +D RGL++V+G VPG+ K W++VRD+ K A Sbjct: 180 KIDKARGLVMVRGAVPGS-KGGWVIVRDAVKKAAPA 214 >gi|295398288|ref|ZP_06808330.1| 50S ribosomal protein L3 [Aerococcus viridans ATCC 11563] gi|294973427|gb|EFG49212.1| 50S ribosomal protein L3 [Aerococcus viridans ATCC 11563] Length = 211 Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 83/213 (38%), Positives = 123/213 (57%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT + G +PVTV+ V+ +T + +GY A+QVG + Sbjct: 1 MTKGILGKKVGMTQFFTETGELVPVTVIEAQPNVVLQAKTNETDGYEAIQVGFDNKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +PK+ + EF+ + VGS F G +VDVTG + GKGF Sbjct: 61 ANKPHKGHVAKAETTPKRFIKEFK-DVELGDYEVGSEIKVDIFQAGDIVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH +HG HRS GS G D +VFK K + G+ GG ++T++NLE+V Sbjct: 120 QGAIKRHGQSRGPMSHGSH-YHRSPGSMGMASDASKVFKGKNLPGQTGGTQITIQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD +R +IL+KG VPGAKK S + ++ + KSA Sbjct: 179 KVDAERNVILIKGNVPGAKK-SMVTIKSAVKSA 210 >gi|227328949|ref|ZP_03832973.1| 50S ribosomal protein L3 [Pectobacterium carotovorum subsp. carotovorum WPP14] gi|253690183|ref|YP_003019373.1| ribosomal protein L3 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259709730|sp|C6DG74|RL3_PECCP RecName: Full=50S ribosomal protein L3 gi|251756761|gb|ACT14837.1| ribosomal protein L3 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 209 Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 132/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRTLREFRLSEGEEFT-VGQSISVEIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|115525585|ref|YP_782496.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris BisA53] gi|122295408|sp|Q07KL8|RL3_RHOP5 RecName: Full=50S ribosomal protein L3 gi|115519532|gb|ABJ07516.1| LSU ribosomal protein L3P [Rhodopseudomonas palustris BisA53] Length = 240 Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 125/219 (57%), Positives = 159/219 (72%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G IPVTVL L NCQV+ HRT +KNGY A+Q+G+G K Sbjct: 1 MRSGVIAQKVGMTRVFTETGEHIPVTVLKLGNCQVLGHRTSEKNGYTALQLGSGSRKTVY 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + K RG F++ V PK+K+ EFRV +D ++P+G+ +F VGQ VDVTG ++GKGF Sbjct: 61 MPKAERGQFAAAKVEPKRKVAEFRVSED-SMIPIGAEIQADHFVVGQFVDVTGTSVGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T NL VV Sbjct: 120 AGGIKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 +D +RGLILV+G VPG+ K WI VRD+ K A+ Sbjct: 180 QLDVERGLILVEGAVPGS-KGGWIAVRDAVKKALPADAP 217 >gi|15828002|ref|NP_302265.1| 50S ribosomal protein L3 [Mycobacterium leprae TN] gi|221230479|ref|YP_002503895.1| 50S ribosomal protein L3 [Mycobacterium leprae Br4923] gi|13093555|emb|CAC30817.1| 50S ribosomal protein L3 [Mycobacterium leprae] gi|219933586|emb|CAR71959.1| 50S ribosomal protein L3 [Mycobacterium leprae Br4923] Length = 218 Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 93/214 (43%), Positives = 126/214 (58%), Gaps = 3/214 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ R +PVTV+ V RTL+++GY AVQ+ GE + V Sbjct: 4 RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTLERDGYSAVQLAYGEISPRKV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP+ G ++S V+P++ L E R+ D VG + F VDVTG + GKG Sbjct: 64 NKPVTGQYNSAGVNPRRYLAELRLDHPDAAAEYEVGQELTAEIFADATYVDVTGTSKGKG 123 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV+NL V Sbjct: 124 FSGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 183 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + G++L+KG VPG + ++VR + K Sbjct: 184 HKVDTENGVLLIKGAVPG-RTGGLVMVRSAIKRG 216 >gi|13432203|sp|P30762|RL3_MYCLE RecName: Full=50S ribosomal protein L3 Length = 217 Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 93/214 (43%), Positives = 126/214 (58%), Gaps = 3/214 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ R +PVTV+ V RTL+++GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTLERDGYSAVQLAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP+ G ++S V+P++ L E R+ D VG + F VDVTG + GKG Sbjct: 63 NKPVTGQYNSAGVNPRRYLAELRLDHPDAAAEYEVGQELTAEIFADATYVDVTGTSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV+NL V Sbjct: 123 FSGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + G++L+KG VPG + ++VR + K Sbjct: 183 HKVDTENGVLLIKGAVPG-RTGGLVMVRSAIKRG 215 >gi|114319619|ref|YP_741302.1| 50S ribosomal protein L3P [Alkalilimnicola ehrlichii MLHE-1] gi|122312456|sp|Q0ABH5|RL3_ALHEH RecName: Full=50S ribosomal protein L3 gi|114226013|gb|ABI55812.1| LSU ribosomal protein L3P [Alkalilimnicola ehrlichii MLHE-1] Length = 218 Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 102/210 (48%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT V+ +G +PVTV+ +V RT +++GY VQV AG + Sbjct: 1 MSIGIVGRKAGMTRVFTEDGASVPVTVIEASPNRVTQVRTPERDGYSGVQVTAGSRRPNR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDD-LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 VSKPM G F++ V + ++EFRV L G + F GQ+VD+TG + GKG Sbjct: 61 VSKPMAGHFAAAGVDAGRGVWEFRVSDGQAIELEAGKELTVETFEAGQVVDITGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRHNF ATHG S++HR+ GS G Q PGRVFK KKMAG+MG R TVKNLEV Sbjct: 121 FAGTVKRHNFRTQDATHGNSLAHRAPGSIGQNQTPGRVFKGKKMAGQMGNKRSTVKNLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 V VD +R L+LV+G VPGA S ++VR + Sbjct: 181 VRVDAERHLLLVRGSVPGAV-GSDVIVRPA 209 >gi|313816574|gb|EFS54288.1| 50S ribosomal protein L3 [Propionibacterium acnes HL059PA1] gi|315097985|gb|EFT69961.1| 50S ribosomal protein L3 [Propionibacterium acnes HL059PA2] Length = 223 Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 101/213 (47%), Positives = 130/213 (61%), Gaps = 2/213 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGMT +++ R +PVTV+ C V RT + +GY AVQ+G G K KNV+ Sbjct: 8 KGVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKNVT 67 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P++ L E R D +G + F+ VDVT + GKG +G Sbjct: 68 KPEAGHFEKAGVTPRRHLVELR-TADASEYALGQEIAADVFSESDFVDVTATSKGKGTAG 126 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGGLRATHGV HRS GS G PG+V K +MAGRMG RVTV+NL+V SV Sbjct: 127 VMKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQNLQVHSV 186 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D +RG++LV+G VPG K S ++VR + K A Sbjct: 187 DAERGIMLVRGAVPGP-KGSLLVVRSAAKKAAK 218 >gi|168187814|ref|ZP_02622449.1| ribosomal protein L3 [Clostridium botulinum C str. Eklund] gi|169294352|gb|EDS76485.1| ribosomal protein L3 [Clostridium botulinum C str. Eklund] Length = 209 Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 86/212 (40%), Positives = 130/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ RK+GMT +++ G+ IPVTV+ C V+ ++ +K+GY A+QVG + + K Sbjct: 1 MKKAIIGRKIGMTQIFDENGKVIPVTVVEAGPCAVLQKKSEEKDGYNAIQVGFEDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G F+ VS K+ + EFR++ D+ VG+ F G VDVTG++ GKGF Sbjct: 61 ANKPKKGHFAKAGVSLKRIVKEFRLENIDE-YEVGTEIKADVFEAGDKVDVTGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF HG S HR+ GS G DP R FKNKKM G MG + TV N+EVV Sbjct: 120 QGTIKRWNFHRGPMAHG-SKYHRAVGSMGAASDPSRTFKNKKMPGHMGNKKSTVLNIEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V + ++L+KG +PG K +++++D+ K+ Sbjct: 179 KVMADKNVLLIKGGIPGPNKG-YVVIKDTVKA 209 >gi|138893785|ref|YP_001124238.1| 50S ribosomal protein L3 [Geobacillus thermodenitrificans NG80-2] gi|196251024|ref|ZP_03149706.1| ribosomal protein L3 [Geobacillus sp. G11MC16] gi|166233146|sp|A4IJI9|RL3_GEOTN RecName: Full=50S ribosomal protein L3 gi|134265298|gb|ABO65493.1| Ribosomal protein L3 [Geobacillus thermodenitrificans NG80-2] gi|196209496|gb|EDY04273.1| ribosomal protein L3 [Geobacillus sp. G11MC16] Length = 211 Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 85/215 (39%), Positives = 124/215 (57%), Gaps = 4/215 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+Q+G + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTIENDGYEAIQLGFEDLSTKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G + N +PK+ + E R ++ VG F+ G +VDVTG++ GKGF Sbjct: 61 ANKPQIGHAAKANTAPKRFIREIRGANVNE-YEVGQEVKVDIFSEGDIVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFK K + GRMGG RVT++NL++V Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGAIA-PNRVFKTKNLPGRMGGERVTIQNLKIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 VD +R L+L+KG VPG +K ++V+ + K+ Sbjct: 178 KVDPERNLLLIKGNVPGPRKG-LVIVKSAVKAKAK 211 >gi|296168557|ref|ZP_06850361.1| 50S ribosomal protein L3 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896620|gb|EFG76259.1| 50S ribosomal protein L3 [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 217 Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 91/214 (42%), Positives = 126/214 (58%), Gaps = 3/214 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ R +PVTV+ V RT +++GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDENNRIVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP+ G +S+ V+P++ L E R+ + VG + F G VDVTG + GKG Sbjct: 63 NKPVTGQYSAAGVNPRRHLAELRLDDEAAAGEYEVGQELTAEIFADGSYVDVTGTSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV+NL V Sbjct: 123 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLVV 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + G++L+KG VPG + ++VR + K Sbjct: 183 HKVDTENGVLLIKGAVPG-RTGGLVMVRSAIKRG 215 >gi|164686527|ref|ZP_02210555.1| hypothetical protein CLOBAR_00094 [Clostridium bartlettii DSM 16795] gi|164604396|gb|EDQ97861.1| hypothetical protein CLOBAR_00094 [Clostridium bartlettii DSM 16795] Length = 209 Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 93/211 (44%), Positives = 129/211 (61%), Gaps = 4/211 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GMT ++ G IPVTV+ V +T + +GY A+QVG +AK K+++ Sbjct: 2 KGILGKKIGMTQIFTEHGEVIPVTVVEAGPVVVTQIKTTENDGYTAIQVGFQDAKEKSLN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP +G ++ N KK L EFRV + VG F G+L+DVTG++ GKGF G Sbjct: 62 KPQKGHLAAANT-LKKHLKEFRVDS-VEEYTVGQEIKADLFAAGELIDVTGISKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH THG S HR GS G PGRVFKNKK+AG MG +VTV+NLEVV V Sbjct: 120 PIKRHGQSRGPETHG-SRYHRRPGSMGACSYPGRVFKNKKLAGHMGSVKVTVQNLEVVRV 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + ILVKG +PGA K S + ++++ K++ Sbjct: 179 DADKNFILVKGAIPGA-KGSVVTIKEAVKAS 208 >gi|219871730|ref|YP_002476105.1| 50S ribosomal protein L3 [Haemophilus parasuis SH0165] gi|254803675|sp|B8F755|RL3_HAEPS RecName: Full=50S ribosomal protein L3 gi|219691934|gb|ACL33157.1| 50S ribosomal protein L3 [Haemophilus parasuis SH0165] Length = 208 Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 100/210 (47%), Positives = 133/210 (63%), Gaps = 3/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V RK+GMT ++N +G IPVTV+ ++ +V +TL+ +GY AVQV G K V+ Sbjct: 2 IGLVGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKASRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V + L+EFR + + +G + FT + VDVTG + GKGF G Sbjct: 62 KPEAGHFVKAGVEAGRGLWEFRTEG--EEFTLGQEINVDIFTDVKKVDVTGTSKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV V Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA NS ++V+ + K+ Sbjct: 180 DAERKLLLVKGSVPGA-TNSDVIVKPAVKA 208 >gi|16762843|ref|NP_458460.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16766729|ref|NP_462344.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29144330|ref|NP_807672.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56415359|ref|YP_152434.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62181944|ref|YP_218361.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|168260850|ref|ZP_02682823.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168468001|ref|ZP_02701838.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194445166|ref|YP_002042690.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194447875|ref|YP_002047463.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194472945|ref|ZP_03078929.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194737134|ref|YP_002116382.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197248367|ref|YP_002148359.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264223|ref|ZP_03164297.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197364289|ref|YP_002143926.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198243139|ref|YP_002217402.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200387538|ref|ZP_03214150.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205354932|ref|YP_002228733.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858682|ref|YP_002245333.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213052953|ref|ZP_03345831.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213583772|ref|ZP_03365598.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213613028|ref|ZP_03370854.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646335|ref|ZP_03376388.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213865564|ref|ZP_03387683.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224585235|ref|YP_002639034.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238913845|ref|ZP_04657682.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289806054|ref|ZP_06536683.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289824750|ref|ZP_06544215.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|42559567|sp|P60445|RL3_SALTI RecName: Full=50S ribosomal protein L3 gi|42559568|sp|P60446|RL3_SALTY RecName: Full=50S ribosomal protein L3 gi|81309571|sp|Q57J32|RL3_SALCH RecName: Full=50S ribosomal protein L3 gi|81821488|sp|Q5PIV2|RL3_SALPA RecName: Full=50S ribosomal protein L3 gi|226730559|sp|B5F8F2|RL3_SALA4 RecName: Full=50S ribosomal protein L3 gi|226730560|sp|B5FJL4|RL3_SALDC RecName: Full=50S ribosomal protein L3 gi|226730561|sp|B5R291|RL3_SALEP RecName: Full=50S ribosomal protein L3 gi|226730562|sp|B5RH15|RL3_SALG2 RecName: Full=50S ribosomal protein L3 gi|226730563|sp|B4TKL5|RL3_SALHS RecName: Full=50S ribosomal protein L3 gi|226730564|sp|B4SUU0|RL3_SALNS RecName: Full=50S ribosomal protein L3 gi|226730565|sp|B5BGY6|RL3_SALPK RecName: Full=50S ribosomal protein L3 gi|226730566|sp|B4TXE2|RL3_SALSV RecName: Full=50S ribosomal protein L3 gi|254803688|sp|C0Q0B6|RL3_SALPC RecName: Full=50S ribosomal protein L3 gi|25294952|pir||AI1005 50S ribosomal chain protein L3 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16421997|gb|AAL22303.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16505149|emb|CAD08173.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp. enterica serovar Typhi] gi|29139968|gb|AAO71532.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56129616|gb|AAV79122.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62129577|gb|AAX67280.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|194403829|gb|ACF64051.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194406179|gb|ACF66398.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194459309|gb|EDX48148.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194712636|gb|ACF91857.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195628908|gb|EDX48318.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197095766|emb|CAR61336.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197212070|gb|ACH49467.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197242478|gb|EDY25098.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197937655|gb|ACH74988.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199604636|gb|EDZ03181.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205274713|emb|CAR39769.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205350127|gb|EDZ36758.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206710485|emb|CAR34843.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224469763|gb|ACN47593.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261248596|emb|CBG26434.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995649|gb|ACY90534.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159983|emb|CBW19502.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914463|dbj|BAJ38437.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087885|emb|CBY97648.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321226487|gb|EFX51537.1| LSU ribosomal protein L3p (L3e) [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322615019|gb|EFY11943.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617306|gb|EFY14207.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625528|gb|EFY22353.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626370|gb|EFY23179.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632118|gb|EFY28871.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635003|gb|EFY31726.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643296|gb|EFY39863.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646620|gb|EFY43127.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649966|gb|EFY46385.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652683|gb|EFY49023.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659560|gb|EFY55804.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665498|gb|EFY61685.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670392|gb|EFY66531.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670465|gb|EFY66599.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675041|gb|EFY71124.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681578|gb|EFY77607.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685922|gb|EFY81911.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322716431|gb|EFZ08002.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323131798|gb|ADX19228.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323194030|gb|EFZ79230.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196452|gb|EFZ81603.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202309|gb|EFZ87354.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207342|gb|EFZ92292.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211222|gb|EFZ96067.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216069|gb|EGA00800.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223440|gb|EGA07768.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226830|gb|EGA11020.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231808|gb|EGA15918.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233239|gb|EGA17334.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237306|gb|EGA21371.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245541|gb|EGA29540.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249047|gb|EGA32969.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250670|gb|EGA34551.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256899|gb|EGA40613.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263048|gb|EGA46595.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266048|gb|EGA49543.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272805|gb|EGA56208.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326625183|gb|EGE31528.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326630081|gb|EGE36424.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 209 Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 132/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLAEGEE-YTVGQSISVELFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA ++V+ + K+ Sbjct: 181 DAERNLLLVKGGVPGA-TGCDLIVKPAVKA 209 >gi|261866795|ref|YP_003254717.1| 50S ribosomal protein L3 [Aggregatibacter actinomycetemcomitans D11S-1] gi|315633455|ref|ZP_07888745.1| 50S ribosomal protein L3 [Aggregatibacter segnis ATCC 33393] gi|261412127|gb|ACX81498.1| ribosomal protein L3 [Aggregatibacter actinomycetemcomitans D11S-1] gi|315477497|gb|EFU68239.1| 50S ribosomal protein L3 [Aggregatibacter segnis ATCC 33393] Length = 208 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 97/210 (46%), Positives = 132/210 (62%), Gaps = 3/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V RK+GMT ++N +G +PVTV+ ++ +V +TL+ +GY AVQV G K V+ Sbjct: 2 IGLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKASRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V + L+EFR + ++ +G + F + VDVTG + GKGF G Sbjct: 62 KPEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV V Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGNERVTVQSLEVVRV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 180 DAERKLLLVKGAVPGA-TGSDVIVKPAVKA 208 >gi|56707478|ref|YP_169374.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis SCHU S4] gi|110669949|ref|YP_666506.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis FSC198] gi|254370829|ref|ZP_04986834.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|81820815|sp|Q5NHW8|RL3_FRATT RecName: Full=50S ribosomal protein L3 gi|122971067|sp|Q14JC0|RL3_FRAT1 RecName: Full=50S ribosomal protein L3 gi|54112825|gb|AAV29046.1| NT02FT0098 [synthetic construct] gi|56603970|emb|CAG44958.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis SCHU S4] gi|110320282|emb|CAL08341.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis FSC198] gi|151569072|gb|EDN34726.1| hypothetical protein FTBG_00644 [Francisella tularensis subsp. tularensis FSC033] gi|282158622|gb|ADA78013.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis NE061598] Length = 211 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 103/212 (48%), Positives = 139/212 (65%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ +G IPVTV+ ++ +V +T++K+GY A+QV G K N Sbjct: 1 MSLGLVGRKCGMTRIFTEDGVSIPVTVVQVEPNKVTQVKTVEKDGYNAIQVTTGFKKRSN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM G ++ +V P + L+EF V + VGS F + F GQ VDV G++ GKGF Sbjct: 61 VNKPMAGHYAKASVEPGRGLWEFTVDAAAE-YQVGSSFDATMFEAGQKVDVRGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRHNF ATHG S+SHR HGSTG Q PGRVFKNKKMAG +G VT+++LEVV Sbjct: 120 QGGVKRHNFATQDATHGNSLSHRVHGSTGQNQTPGRVFKNKKMAGHLGNENVTIQSLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + GL+L+KG +PG+ I+V + KS Sbjct: 180 RVDAENGLLLLKGGIPGSVGGD-IIVTPAVKS 210 >gi|91977652|ref|YP_570311.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris BisB5] gi|123748930|sp|Q134S9|RL3_RHOPS RecName: Full=50S ribosomal protein L3 gi|91684108|gb|ABE40410.1| LSU ribosomal protein L3P [Rhodopseudomonas palustris BisB5] Length = 241 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 129/219 (58%), Positives = 157/219 (71%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G IPVTVL L NCQVV HRT +KNGY+A+Q+G+G K Sbjct: 1 MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLGNCQVVAHRTTEKNGYVALQLGSGARKTVY 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + K RG F+ V PK+K+ EFRV +D L+PVG+ +F VGQ VDVTG + GKGF Sbjct: 61 MPKAERGQFAVAKVEPKRKVAEFRVSED-ALIPVGAEIQADHFVVGQFVDVTGTSTGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T NL VV Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 D +RGLILV+G VPG+ K WI VRD+ K A+ Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWISVRDAVKKALPADAP 217 >gi|15607841|ref|NP_215215.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis H37Rv] gi|15840108|ref|NP_335145.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis CDC1551] gi|31791886|ref|NP_854379.1| 50S ribosomal protein L3 [Mycobacterium bovis AF2122/97] gi|121636623|ref|YP_976846.1| 50S ribosomal protein L3 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660476|ref|YP_001281999.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis H37Ra] gi|148821906|ref|YP_001286660.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis F11] gi|167967943|ref|ZP_02550220.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis H37Ra] gi|215402485|ref|ZP_03414666.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis 02_1987] gi|215410256|ref|ZP_03419064.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis 94_M4241A] gi|215425943|ref|ZP_03423862.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis T92] gi|215429541|ref|ZP_03427460.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis EAS054] gi|215444824|ref|ZP_03431576.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis T85] gi|218752351|ref|ZP_03531147.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis GM 1503] gi|219556550|ref|ZP_03535626.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis T17] gi|224989095|ref|YP_002643782.1| 50S ribosomal protein L3 [Mycobacterium bovis BCG str. Tokyo 172] gi|253797644|ref|YP_003030645.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis KZN 1435] gi|254231021|ref|ZP_04924348.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis C] gi|254363648|ref|ZP_04979694.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis str. Haarlem] gi|254549662|ref|ZP_05140109.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185583|ref|ZP_05763057.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis CPHL_A] gi|260199711|ref|ZP_05767202.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis T46] gi|260203872|ref|ZP_05771363.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis K85] gi|289442102|ref|ZP_06431846.1| LSU ribosomal protein L3 [Mycobacterium tuberculosis T46] gi|289446261|ref|ZP_06436005.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis CPHL_A] gi|289552958|ref|ZP_06442168.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis KZN 605] gi|289568645|ref|ZP_06448872.1| ribosomal protein L3 [Mycobacterium tuberculosis T17] gi|289573309|ref|ZP_06453536.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis K85] gi|289744425|ref|ZP_06503803.1| ribosomal protein L3 [Mycobacterium tuberculosis 02_1987] gi|289749208|ref|ZP_06508586.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis T92] gi|289752748|ref|ZP_06512126.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis EAS054] gi|289756789|ref|ZP_06516167.1| ribosomal protein L3 [Mycobacterium tuberculosis T85] gi|289760828|ref|ZP_06520206.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis GM 1503] gi|294996196|ref|ZP_06801887.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis 210] gi|297633200|ref|ZP_06950980.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis KZN 4207] gi|297730180|ref|ZP_06959298.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis KZN R506] gi|298524192|ref|ZP_07011601.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis 94_M4241A] gi|306774812|ref|ZP_07413149.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu001] gi|306781456|ref|ZP_07419793.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu002] gi|306783353|ref|ZP_07421675.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu003] gi|306787722|ref|ZP_07426044.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu004] gi|306794489|ref|ZP_07432791.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu005] gi|306796455|ref|ZP_07434757.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu006] gi|306806525|ref|ZP_07443193.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu007] gi|306966722|ref|ZP_07479383.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu009] gi|306970914|ref|ZP_07483575.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu010] gi|307078644|ref|ZP_07487814.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu011] gi|307083208|ref|ZP_07492321.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu012] gi|313657507|ref|ZP_07814387.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis KZN V2475] gi|42560219|sp|P60441|RL3_MYCBO RecName: Full=50S ribosomal protein L3 gi|42560220|sp|P60442|RL3_MYCTU RecName: Full=50S ribosomal protein L3 gi|166233162|sp|A1KGI2|RL3_MYCBP RecName: Full=50S ribosomal protein L3 gi|166233166|sp|A5U087|RL3_MYCTA RecName: Full=50S ribosomal protein L3 gi|254803684|sp|C1AL35|RL3_MYCBT RecName: Full=50S ribosomal protein L3 gi|1806169|emb|CAB06464.1| PROBABLE 50S RIBOSOMAL PROTEIN L3 RPLC [Mycobacterium tuberculosis H37Rv] gi|13880258|gb|AAK44959.1| ribosomal protein L3 [Mycobacterium tuberculosis CDC1551] gi|31617473|emb|CAD93583.1| PROBABLE 50S RIBOSOMAL PROTEIN L3 RPLC [Mycobacterium bovis AF2122/97] gi|121492270|emb|CAL70737.1| Probable 50S ribosomal protein L3 rplC [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600080|gb|EAY59090.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis C] gi|134149162|gb|EBA41207.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis str. Haarlem] gi|148504628|gb|ABQ72437.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis H37Ra] gi|148720433|gb|ABR05058.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis F11] gi|224772208|dbj|BAH25014.1| 50S ribosomal protein L3 [Mycobacterium bovis BCG str. Tokyo 172] gi|253319147|gb|ACT23750.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis KZN 1435] gi|289415021|gb|EFD12261.1| LSU ribosomal protein L3 [Mycobacterium tuberculosis T46] gi|289419219|gb|EFD16420.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis CPHL_A] gi|289437590|gb|EFD20083.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis KZN 605] gi|289537740|gb|EFD42318.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis K85] gi|289542399|gb|EFD46047.1| ribosomal protein L3 [Mycobacterium tuberculosis T17] gi|289684953|gb|EFD52441.1| ribosomal protein L3 [Mycobacterium tuberculosis 02_1987] gi|289689795|gb|EFD57224.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis T92] gi|289693335|gb|EFD60764.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis EAS054] gi|289708334|gb|EFD72350.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis GM 1503] gi|289712353|gb|EFD76365.1| ribosomal protein L3 [Mycobacterium tuberculosis T85] gi|298493986|gb|EFI29280.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis 94_M4241A] gi|308216702|gb|EFO76101.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu001] gi|308325756|gb|EFP14607.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu002] gi|308331847|gb|EFP20698.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu003] gi|308335634|gb|EFP24485.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu004] gi|308337249|gb|EFP26100.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu005] gi|308343115|gb|EFP31966.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu006] gi|308347002|gb|EFP35853.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu007] gi|308355577|gb|EFP44428.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu009] gi|308359535|gb|EFP48386.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu010] gi|308363440|gb|EFP52291.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu011] gi|308367078|gb|EFP55929.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu012] gi|323720925|gb|EGB29991.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis CDC1551A] gi|326905077|gb|EGE52010.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis W-148] gi|328457425|gb|AEB02848.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis KZN 4207] Length = 217 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 91/214 (42%), Positives = 125/214 (58%), Gaps = 3/214 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ R +PVTV+ V RT +++GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP+ G +++ V+P++ L E R+ D VG + F G VDVTG + GKG Sbjct: 63 NKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV NL V Sbjct: 123 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLV 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + G++L+KG VPG + ++VR + K Sbjct: 183 HKVDAENGVLLIKGAVPG-RTGGLVMVRSAIKRG 215 >gi|85060256|ref|YP_455958.1| 50S ribosomal protein L3 [Sodalis glossinidius str. 'morsitans'] gi|109893557|sp|Q2NQM2|RL3_SODGM RecName: Full=50S ribosomal protein L3 gi|84780776|dbj|BAE75553.1| 50S ribosomal protein L3 [Sodalis glossinidius str. 'morsitans'] Length = 209 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 96/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT ++ +G IPVTV+ ++ +V + L+ +GY A+QV AG K V Sbjct: 2 KGLIGRKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLENDGYRAIQVTAGTKKANRVI 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFRV +D + + VG + F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRV-EDGEEVTVGQSITVELFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA I V+ + K+ Sbjct: 181 DVERNLLLVKGAVPGATGGDLI-VKPAVKA 209 >gi|304391453|ref|ZP_07373395.1| 50S ribosomal protein L3 [Ahrensia sp. R2A130] gi|303295682|gb|EFL90040.1| 50S ribosomal protein L3 [Ahrensia sp. R2A130] Length = 277 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 134/218 (61%), Positives = 170/218 (77%), Gaps = 2/218 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT +Y EG +PVTVL +++ QV+ RT +K+GY AVQ+GAG+AKVKN Sbjct: 1 MRSGVIAQKVGMTRIYTDEGINVPVTVLRMEHVQVIAQRTEEKHGYTAVQLGAGKAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKPMRG F+ V PK+KL EFRV ++ +L+PVG+ +++ GQ VDVTG TIGKGF Sbjct: 61 VSKPMRGHFAVAKVEPKRKLAEFRVTEE-NLVPVGAEIIAAHYMPGQFVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRHNFGGLRA+HGVS+SHRSHGSTG QDPG+VFK K+MAG MG RVT +N++VV Sbjct: 120 AGAMKRHNFGGLRASHGVSVSHRSHGSTGQCQDPGKVFKGKRMAGHMGNTRVTTQNIQVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 SVD RGL+LVKG VPG K W+ +RD+ K V+ Sbjct: 180 SVDVDRGLVLVKGAVPGP-KGGWVTLRDAIKKPVHPDA 216 >gi|254822787|ref|ZP_05227788.1| 50S ribosomal protein L3 [Mycobacterium intracellulare ATCC 13950] Length = 217 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 92/214 (42%), Positives = 127/214 (59%), Gaps = 3/214 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ R +PVTV+ V RT +++GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDENNRIVPVTVVKAGPNVVTRIRTPEQDGYSAVQLAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP+ G +++ V+P++ L E R+ D VG + FT G VDVTG + GKG Sbjct: 63 NKPVTGQYAAAGVNPRRFLAELRLDNPDAAAEYQVGQELTAEIFTDGSYVDVTGTSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV+NL V Sbjct: 123 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + G++L+KG VPG + ++VR + K Sbjct: 183 HKVDTENGVLLIKGAVPG-RTGGLVVVRSAVKRG 215 >gi|261342790|ref|ZP_05970648.1| 50S ribosomal protein L3 [Enterobacter cancerogenus ATCC 35316] gi|288314968|gb|EFC53906.1| 50S ribosomal protein L3 [Enterobacter cancerogenus ATCC 35316] Length = 209 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQDISVELFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|53803548|ref|YP_114788.1| 50S ribosomal protein L3 [Methylococcus capsulatus str. Bath] gi|81823603|sp|Q605B2|RL3_METCA RecName: Full=50S ribosomal protein L3 gi|53757309|gb|AAU91600.1| ribosomal protein L3 [Methylococcus capsulatus str. Bath] Length = 211 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 95/212 (44%), Positives = 130/212 (61%), Gaps = 1/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+H++ +VV +TL+ +GY A+QV G K Sbjct: 1 MAIGLVGRKCGMTHIFTDAGAAVPVTVIHVEPNRVVQVKTLESDGYRAIQVTTGSKKRSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++K G +S V + L+EFR++ D VG+ F GQ VD +IGKGF Sbjct: 61 LTKADAGHYSKAGVEAGRGLWEFRLEDSDQDYTVGTELGVGVFAEGQFVDARARSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNF ATHG S+SHR+ GS G Q PGRVFK K+MAG MG +TV NL +V Sbjct: 121 AGVVKRHNFRTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKRMAGHMGDKNITVPNLRIV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D +R L+LVKG VPG K + ++VR + K Sbjct: 181 GIDAERSLLLVKGAVPG-TKGADVIVRPAAKK 211 >gi|33152958|ref|NP_874311.1| 50S ribosomal protein L3 [Haemophilus ducreyi 35000HP] gi|42559602|sp|Q7VKD2|RL3_HAEDU RecName: Full=50S ribosomal protein L3 gi|33149183|gb|AAP96700.1| 50S ribosomal protein L3 [Haemophilus ducreyi 35000HP] Length = 208 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 98/210 (46%), Positives = 133/210 (63%), Gaps = 3/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+N +G IPVTV+ ++ +V +TL+ +GY A+QV G K V+ Sbjct: 2 IGLIGRKVGMTRVFNEDGVSIPVTVIEIEANRVTQVKTLENDGYSAIQVTTGTKKASRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V + L+EFR + + +G + F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFVKAGVEAGRGLWEFRTEG--EEFTLGQEINVDIFADVKKVDVTGTSKGKGFAG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV V Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA NS ++V+ + K+ Sbjct: 180 DAERKLLLVKGAVPGA-TNSNVIVKPAVKA 208 >gi|293391695|ref|ZP_06636029.1| ribosomal protein L3 [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952229|gb|EFE02348.1| ribosomal protein L3 [Aggregatibacter actinomycetemcomitans D7S-1] Length = 208 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 97/210 (46%), Positives = 132/210 (62%), Gaps = 3/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V RK+GMT ++N +G +PVTV+ ++ +V +TL+ +GY AVQV G K V+ Sbjct: 2 IGLVGRKVGMTRIFNEDGVSVPVTVIEVEANRVTQVKTLENDGYTAVQVTTGSKKASRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V + L+EFR + ++ +G + F + VDVTG + GKGF G Sbjct: 62 KPEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV V Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGNERVTVQSLEVVRV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 180 DAERKLLLVKGAVPGA-TGSDVIVKPAVKA 208 >gi|156932231|ref|YP_001436147.1| 50S ribosomal protein L3 [Cronobacter sakazakii ATCC BAA-894] gi|166233141|sp|A7MPI7|RL3_ENTS8 RecName: Full=50S ribosomal protein L3 gi|156530485|gb|ABU75311.1| hypothetical protein ESA_00002 [Cronobacter sakazakii ATCC BAA-894] Length = 209 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 97/210 (46%), Positives = 132/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ EG IPVTV+ ++ +V + L +GY AVQV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEEGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ D + VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRL-ADGEEYTVGQSISVELFAEVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|327332709|gb|EGE74443.1| 50S ribosomal protein L3 [Propionibacterium acnes HL097PA1] Length = 223 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 102/213 (47%), Positives = 131/213 (61%), Gaps = 2/213 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGMT +++ R +PVTV+ C V RT + +GY AVQ+G G K KNV+ Sbjct: 8 KGVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTSETDGYSAVQLGYGAVKAKNVT 67 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P++ L E R D +G + F+ VDVTG + GKG +G Sbjct: 68 KPEAGHFEKAGVTPRRHLVELR-TADASEYTLGQEIAADVFSESDFVDVTGTSKGKGTAG 126 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGGLRATHGV HRS GS G PG+V K +MAGRMG RVTV+NL+V SV Sbjct: 127 VMKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQNLQVHSV 186 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D +RG++LV+G VPG K S ++VR + K A Sbjct: 187 DAERGIMLVRGAVPGP-KGSLLVVRSAAKKAAK 218 >gi|323703548|ref|ZP_08115194.1| 50S ribosomal protein L3 [Desulfotomaculum nigrificans DSM 574] gi|323531539|gb|EGB21432.1| 50S ribosomal protein L3 [Desulfotomaculum nigrificans DSM 574] Length = 209 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 89/212 (41%), Positives = 127/212 (59%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++N EG IPVTV+ C VV +T++ +GY A+Q+G GE + Sbjct: 1 MPVGILGKKVGMTQIFNKEGIAIPVTVVEAGPCVVVQKKTVETDGYNAIQLGFGEKREAL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + V P + L E RV +D + VG F GQ VDV G + G+GF Sbjct: 61 INKPTKGHLAKAGVRPVRFLRELRV-EDPNAYEVGQEIKADIFNEGQKVDVVGTSKGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNF HG S HR GS+ + P R FK +K+ G G RVTV+NLEVV Sbjct: 120 AGGIKRHNFHRGPMAHG-SKYHRRPGSS-AAKGPARTFKGRKLPGHYGVERVTVQNLEVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+ +KG VPG + +LV++S K+ Sbjct: 178 KVDPERNLLAIKGAVPGP-RGGLLLVKNSVKA 208 >gi|260914680|ref|ZP_05921146.1| 50S ribosomal protein L3 [Pasteurella dagmatis ATCC 43325] gi|260631279|gb|EEX49464.1| 50S ribosomal protein L3 [Pasteurella dagmatis ATCC 43325] Length = 209 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 96/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V RK+GMT ++N +G IPVTV+ ++ +V +T++ +GY A+QV G K V+ Sbjct: 2 IGLVGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTVETDGYSAIQVTTGSKKASRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V + L+EFR + ++ +G + F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFVKAGVEAGRGLWEFRTTEGEEFT-LGQEINVDIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV V Sbjct: 121 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA N ++V+ + K+ Sbjct: 181 DAERKLLLVKGAVPGA-TNGDVIVKPAVKA 209 >gi|170769506|ref|ZP_02903959.1| ribosomal protein L3 [Escherichia albertii TW07627] gi|170121563|gb|EDS90494.1| ribosomal protein L3 [Escherichia albertii TW07627] Length = 209 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 94/210 (44%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|117924155|ref|YP_864772.1| 50S ribosomal protein L3P [Magnetococcus sp. MC-1] gi|212288406|sp|A0L5X3|RL3_MAGSM RecName: Full=50S ribosomal protein L3 gi|117607911|gb|ABK43366.1| LSU ribosomal protein L3P [Magnetococcus sp. MC-1] Length = 214 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 105/213 (49%), Positives = 140/213 (65%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++ RKLGM+ ++ +G+RIPVT++ L C VV R+ +++GY AVQ+G EAK Sbjct: 1 MRSGLIGRKLGMSQMFTEDGQRIPVTLVQLGPCAVVAKRSDEQDGYNAVQLGFEEAKPSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SK +RG ++ NV+P++ L EFRV + VG + F V VDVTG T+GKGF Sbjct: 61 LSKTVRGQYAKANVTPRRVLREFRVSNPES-YEVGQELTAEQFAVDSFVDVTGKTVGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR F G RA+HG HRS GS G Q PGRV+KNKKMAG MG TV+NL+V Sbjct: 120 AGVMKRWGFRGGRASHGAHKVHRSGGSIGQCQTPGRVYKNKKMAGHMGQQTRTVQNLKVA 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + +I VKG +PG+ K S +LVRD+ K Sbjct: 180 YVDAVQSIIAVKGSIPGS-KGSLVLVRDALKKG 211 >gi|319778743|ref|YP_004129656.1| LSU ribosomal protein L3p (L3e) [Taylorella equigenitalis MCE9] gi|317108767|gb|ADU91513.1| LSU ribosomal protein L3p (L3e) [Taylorella equigenitalis MCE9] Length = 233 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 100/212 (47%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ RK+GM ++ EG IPVTVL + N +V ++++ +GY AVQV G + V Sbjct: 16 RLGLLGRKVGMMRIFTDEGESIPVTVLDVSNNRVTQVKSVETDGYAAVQVAYGTRRASRV 75 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119 +K G ++ V L EFR+ GSV + F VGQ VDV G TIGKG Sbjct: 76 NKAQTGHYAKAGVEAGSILKEFRLDPAKAAEFSAGSVVAVDSVFQVGQKVDVQGTTIGKG 135 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRHNFG RA+HG S SHR GS G QDPGR+F K+M+G MG TV+NL++ Sbjct: 136 FAGTIKRHNFGAQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMSGHMGDVTRTVQNLDI 195 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +RGL+LVKG VPG KNS I+V + K Sbjct: 196 VRVDAERGLLLVKGAVPG-HKNSDIVVLPAIK 226 >gi|296533987|ref|ZP_06896503.1| 50S ribosomal protein L3 [Roseomonas cervicalis ATCC 49957] gi|296265653|gb|EFH11762.1| 50S ribosomal protein L3 [Roseomonas cervicalis ATCC 49957] Length = 228 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 128/218 (58%), Positives = 160/218 (73%), Gaps = 2/218 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A+KLGMT ++N +G +PVTVLHLD +VV RT +K+GY AVQ+G G AK KNV Sbjct: 7 RTGLIAKKLGMTRLFNDDGSTVPVTVLHLDQVRVVAARTEEKDGYNAVQLGFGLAKPKNV 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SKP +G F+ V KK+ EFRV D L P G+ S ++F GQ+VDVTG + GKGF+ Sbjct: 67 SKPNKGHFAKAGVEAPKKVVEFRVAADAMLEP-GAKLSANHFVKGQIVDVTGTSKGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 GAMKR NF GL ATHGVSISHRSHGSTG RQDPG+ FKNKKMAG +G RVT +NLEV Sbjct: 126 GAMKRWNFSGLEATHGVSISHRSHGSTGNRQDPGKTFKNKKMAGHLGVERVTTQNLEVAG 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 D ++GL+LVKG VPGA K ++LVRD+ K+A + Sbjct: 186 FDLEKGLLLVKGAVPGA-KGGYVLVRDAVKTARHADAP 222 >gi|296105028|ref|YP_003615174.1| 50S ribosomal protein L3 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059487|gb|ADF64225.1| 50S ribosomal protein L3 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295096961|emb|CBK86051.1| LSU ribosomal protein L3P [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 209 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 94/210 (44%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQDISVELFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|32035713|ref|ZP_00135594.1| COG0087: Ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209224|ref|YP_001054449.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae L20] gi|165977196|ref|YP_001652789.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190151114|ref|YP_001969639.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303250012|ref|ZP_07336214.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253186|ref|ZP_07339335.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307246689|ref|ZP_07528759.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307248831|ref|ZP_07530844.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307251058|ref|ZP_07532982.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307253444|ref|ZP_07535315.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307255674|ref|ZP_07537478.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307257857|ref|ZP_07539614.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307260126|ref|ZP_07541836.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307262255|ref|ZP_07543904.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307264464|ref|ZP_07546049.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|166233111|sp|A3N358|RL3_ACTP2 RecName: Full=50S ribosomal protein L3 gi|226725121|sp|B3GZ11|RL3_ACTP7 RecName: Full=50S ribosomal protein L3 gi|226725122|sp|B0BST1|RL3_ACTPJ RecName: Full=50S ribosomal protein L3 gi|126098016|gb|ABN74844.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165877297|gb|ABY70345.1| ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189916245|gb|ACE62497.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302647868|gb|EFL78075.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302651075|gb|EFL81229.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306852389|gb|EFM84624.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306854758|gb|EFM86948.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306856888|gb|EFM89020.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306859123|gb|EFM91165.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306861351|gb|EFM93341.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306863763|gb|EFM95689.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306865772|gb|EFM97650.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306868018|gb|EFM99845.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306870161|gb|EFN01920.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 208 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 99/210 (47%), Positives = 132/210 (62%), Gaps = 3/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV G K V+ Sbjct: 2 IGLVGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDGYSAIQVTTGSKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V + L+EFR + + +G + FT + VDVTG + GKGF G Sbjct: 62 KPEAGHFVKAGVEAGRGLWEFRTEG--EEFTLGQEINVDIFTDVKKVDVTGTSKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV V Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA NS ++V+ + K+ Sbjct: 180 DAERKLLLVKGAVPGA-TNSDVIVKPAVKA 208 >gi|73542863|ref|YP_297383.1| 50S ribosomal protein L3 [Ralstonia eutropha JMP134] gi|109893544|sp|Q46WE4|RL3_RALEJ RecName: Full=50S ribosomal protein L3 gi|72120276|gb|AAZ62539.1| LSU ribosomal protein L3P [Ralstonia eutropha JMP134] Length = 216 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 90/217 (41%), Positives = 129/217 (59%), Gaps = 2/217 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ + + +V +T + +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTDDGDSIPVTVVEVGDNRVTQIKTDETDGYTAVQVTFGARRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + + EFR+ L G S F VGQ +DV G+TIGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEIIREFRIDAAKAAELQTGGSLSVDLFEVGQKIDVQGVTIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR++F RATHG S SH GS G QDPGRVF K+M G +G TV+NLE+ Sbjct: 121 YAGTIKRYHFASGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTRTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 +D +R L+LVKG +PG+ KN ++V + K+ Sbjct: 181 AKIDAERKLLLVKGAIPGS-KNGKVIVTPAVKAKAKA 216 >gi|39936313|ref|NP_948589.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris CGA009] gi|192292037|ref|YP_001992642.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris TIE-1] gi|316933527|ref|YP_004108509.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris DX-1] gi|42559577|sp|P60456|RL3_RHOPA RecName: Full=50S ribosomal protein L3; AltName: Full=RRP-L3 gi|226730557|sp|B3QBY0|RL3_RHOPT RecName: Full=50S ribosomal protein L3 gi|39650168|emb|CAE28691.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris CGA009] gi|192285786|gb|ACF02167.1| ribosomal protein L3 [Rhodopseudomonas palustris TIE-1] gi|315601241|gb|ADU43776.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris DX-1] Length = 241 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 131/219 (59%), Positives = 157/219 (71%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G IPVTVL L NCQV+ HRT +KNGY+A+QVG+G K Sbjct: 1 MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLGNCQVLGHRTKEKNGYVALQVGSGSRKTVY 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + K RG F++ V PK+K+ EFRV +D LLPVG+ +F VGQ VDVTG + GKGF Sbjct: 61 MPKAERGQFAAAKVEPKRKVEEFRVSED-ALLPVGAEIQADHFVVGQFVDVTGTSTGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +RVT NL VV Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRVTTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 D +RGLILV+G VPG K WI VRD+ K A+ Sbjct: 180 QTDVERGLILVEGAVPG-TKGGWIRVRDAVKKALPADAP 217 >gi|291619176|ref|YP_003521918.1| RplC [Pantoea ananatis LMG 20103] gi|291154206|gb|ADD78790.1| RplC [Pantoea ananatis LMG 20103] gi|327395506|dbj|BAK12928.1| 50S ribosomal protein L3 RplC [Pantoea ananatis AJ13355] Length = 209 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 133/210 (63%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L+ +GY A+QV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKGLENDGYQAIQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR + D+ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRTVEGDE-YAVGQSISVEIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|319654868|ref|ZP_08008943.1| 50S ribosomal protein L3 [Bacillus sp. 2_A_57_CT2] gi|317393431|gb|EFV74194.1| 50S ribosomal protein L3 [Bacillus sp. 2_A_57_CT2] Length = 208 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 87/212 (41%), Positives = 127/212 (59%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ ++++ +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVVEAAPNVVLQMKSVETDGYEAIQLGFEDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EFR D VG F G+ VDVTG++ GKGF Sbjct: 61 SNKPEKGHVAKANTAPKRFVREFRG-ADLGQYEVGQEVKVDIFAEGETVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G P RVFK K + GRMGG ++TV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGEQITVQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA+K + + ++ + K+ Sbjct: 178 KVDAERNLLLIKGNVPGARK-ALVKIKSAVKA 208 >gi|253682166|ref|ZP_04862963.1| 50S ribosomal protein L3 [Clostridium botulinum D str. 1873] gi|253561878|gb|EES91330.1| 50S ribosomal protein L3 [Clostridium botulinum D str. 1873] Length = 209 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 89/212 (41%), Positives = 130/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ RK+GMT +++ G+ IPVTV+ C V+ +T +K+GY A+QVG + + K Sbjct: 1 MKKAIIGRKVGMTQIFDENGKVIPVTVVEAGPCAVLQKKTEEKDGYNAIQVGFEDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G F+ VS K+ + EFR++ D+ VGS F G VDVTG++ GKGF Sbjct: 61 ANKPKKGHFAKAGVSLKRIVREFRLENIDE-YEVGSEIKADVFEAGDKVDVTGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF HG S HR+ GS G DP R FKNKKM G MG + TV NLEVV Sbjct: 120 QGTIKRWNFHRGPMAHG-SKYHRAVGSMGAASDPSRTFKNKKMPGHMGHKKSTVLNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V + +IL+KG +PG K +++++++ K+ Sbjct: 179 KVMADKNVILIKGGIPGPNKG-YVVIKNTVKA 209 >gi|54022700|ref|YP_116942.1| 50S ribosomal protein L3 [Nocardia farcinica IFM 10152] gi|81823259|sp|Q5Z1W3|RL3_NOCFA RecName: Full=50S ribosomal protein L3 gi|54014208|dbj|BAD55578.1| putative ribosomal protein L3 [Nocardia farcinica IFM 10152] Length = 221 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 90/213 (42%), Positives = 126/213 (59%), Gaps = 2/213 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ + R +PVTV+ V RT +++GY AVQV G + V+K Sbjct: 11 GILGTKLGMTQVFDEKNRVVPVTVIKAGPNVVTQIRTEERDGYSAVQVAFGAIDPRKVNK 70 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F+ V+P++ + E RV D VG + F G VDVTG + GKG++G Sbjct: 71 PVAGQFAKAGVTPRRHIAEIRV-ADASSFEVGQEINADVFEEGSYVDVTGTSKGKGYAGT 129 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G A+HG HR GS G PGRVFK +MAGRMG +RVT +NL V VD Sbjct: 130 MKRHGFRGQGASHGAQAVHRRPGSIGGCATPGRVFKGMRMAGRMGNDRVTTQNLSVHKVD 189 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 + GL+L+KG +PG +K ++V+ + K + Sbjct: 190 AENGLLLIKGAIPG-RKGGVVIVKSAVKGGAHA 221 >gi|2344833|emb|CAB11435.1| ribosomal protein L3 [Mycobacterium leprae] Length = 217 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 93/214 (43%), Positives = 125/214 (58%), Gaps = 3/214 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ R +PVTV+ V RTL+ +GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTLEPDGYSAVQLAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP+ G ++S V+P++ L E R+ D VG + F VDVTG + GKG Sbjct: 63 NKPVTGQYNSAGVNPRRYLAELRLDHPDAAAEYEVGQELTAEIFADATYVDVTGTSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV+NL V Sbjct: 123 FSGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + G++L+KG VPG + ++VR + K Sbjct: 183 HKVDTENGVLLIKGAVPG-RTGGLVMVRSAIKRG 215 >gi|320540609|ref|ZP_08040259.1| 50S ribosomal subunit protein L3 [Serratia symbiotica str. Tucson] gi|320029540|gb|EFW11569.1| 50S ribosomal subunit protein L3 [Serratia symbiotica str. Tucson] Length = 209 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 94/210 (44%), Positives = 131/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + LD +GY A+QV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKGLDTDGYRAIQVTTGSKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+++ + G S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLEEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG +G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA + I V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGATGGNLI-VKPAVKA 209 >gi|261823232|ref|YP_003261338.1| 50S ribosomal protein L3 [Pectobacterium wasabiae WPP163] gi|261607245|gb|ACX89731.1| 50S ribosomal protein L3 [Pectobacterium wasabiae WPP163] Length = 209 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 94/210 (44%), Positives = 132/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L EFR+ + ++ +G S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRTLREFRLSEGEEFT-IGQSISVEIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|167854921|ref|ZP_02477697.1| 50S ribosomal protein L3 [Haemophilus parasuis 29755] gi|167853988|gb|EDS25226.1| 50S ribosomal protein L3 [Haemophilus parasuis 29755] Length = 208 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 99/210 (47%), Positives = 133/210 (63%), Gaps = 3/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V RK+GMT ++N +G +PVTV+ ++ +V +TL+ +GY AVQV G K V+ Sbjct: 2 IGLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKASRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V + L+EFR + + +G + FT + VDVTG + GKGF G Sbjct: 62 KPEAGHFVKAGVEAGRGLWEFRTEG--EEFTLGQEINVDIFTDVKKVDVTGTSKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV V Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA NS ++V+ + K+ Sbjct: 180 DAERKLLLVKGSVPGA-TNSDVIVKPAVKA 208 >gi|315605899|ref|ZP_07880930.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 180 str. F0310] gi|315312181|gb|EFU60267.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 180 str. F0310] Length = 221 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 93/211 (44%), Positives = 133/211 (63%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 ++ RK+GMT V++ +G +P+TV+ + V RT++ +GY A+Q+G GE + V+ Sbjct: 13 KALLGRKIGMTQVWDADGHLVPLTVVQVGTNVVTQVRTVEVDGYSAIQLGFGEIDSRKVT 72 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F V+P++ L E R + D +G + F GQ VDV+G T GKGF+G Sbjct: 73 KPLLGHFEKAGVAPRRHLAEVRTSEHDS-YELGQELDATAFEAGQSVDVSGTTKGKGFAG 131 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G PGR+FK +MAGRMGGNR TV+NL + +V Sbjct: 132 VMKRHGFAGVSASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGGNRRTVQNLTIQAV 191 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+L+ G +PG KN +LVR S K A Sbjct: 192 DAEKGLLLISGAIPGP-KNGVVLVRSSVKGA 221 >gi|291562768|emb|CBL41584.1| 50S ribosomal protein L3, bacterial [butyrate-producing bacterium SS3/4] Length = 211 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N EG +PVTVL C V +T + +GY AVQVG + + K Sbjct: 1 MKKAILATKVGMTQIFNDEGVLVPVTVLQAGPCVVTQVKTEENDGYKAVQVGFVDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F VS K+ + EFR + ++ V F G VD T ++ GKGF Sbjct: 61 VNKPVKGHFDKAGVSYKRFVREFRFENSEE-YNVKDEIKADIFAAGDKVDATAISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR HG S HR GS G PGRVFK K M G+MG ++T +NLE+V Sbjct: 120 QGAIKRLGQSRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGQMGNKKITTQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + LILVKG VPG KK S + ++++ K+ Sbjct: 179 KVDVENNLILVKGAVPGPKK-SLVTLKETVKA 209 >gi|291166879|gb|EFE28925.1| 50S ribosomal protein L3 [Filifactor alocis ATCC 35896] Length = 210 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 85/208 (40%), Positives = 125/208 (60%), Gaps = 2/208 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT +++ G IPVTV+ V +T + +GY AVQVG GE K K+V+KP Sbjct: 4 IMGKKIGMTQIFDENGVMIPVTVVEAGPVVVTQIKTEETDGYNAVQVGFGEVKEKHVNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M+G F+ V+ KK + E R + + + F VG+ +DVTG++ GKGF G++ Sbjct: 64 MKGHFAKAGVALKKHVKELRPEDGVENYSLAQEIKVDIFEVGEKIDVTGISKGKGFQGSI 123 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH THG HR+ GS G DP +V K KK+ G MG RVT++NLEV VD Sbjct: 124 KRHGQSRGPETHGSH-YHRAPGSMGSASDPSKVRKGKKLPGHMGHTRVTIQNLEVARVDA 182 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212 ++ LIL+KG +PG KK ++++ + K Sbjct: 183 EKNLILIKGAIPGPKKG-LVVIKTAVKG 209 >gi|297537531|ref|YP_003673300.1| 50S ribosomal protein L3 [Methylotenera sp. 301] gi|297256878|gb|ADI28723.1| 50S ribosomal protein L3 [Methylotenera sp. 301] Length = 219 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 86/216 (39%), Positives = 130/216 (60%), Gaps = 2/216 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ +G IPVTVL + +V +T+ +GY +QV G + Sbjct: 1 MSLGLIGRKVGMTRVFTEDGASIPVTVLEVVPNRVTQIKTIASDGYTGLQVAYGTRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++ + G ++ + + EF V D G+ + F GQ+VDVTG+++GKG Sbjct: 61 INSALTGHYAKSGSAAGAGIHEFPVTSDVLANYTAGANITVDIFQAGQIVDVTGISLGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+GA+KRH+F RA+HG S SH GS G QDPGRVF K+M G +G +VT +NLE+ Sbjct: 121 FAGAIKRHHFKSNRASHGNSKSHNVPGSIGMAQDPGRVFPGKRMPGHLGATKVTTQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 V VD +R L+L+KG +PG+ K ++VR + K+ + Sbjct: 181 VRVDAERNLLLIKGAIPGS-KGGDVVVRPAIKAKLQ 215 >gi|16077184|ref|NP_387997.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. subtilis str. 168] gi|221307928|ref|ZP_03589775.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. subtilis str. 168] gi|221312249|ref|ZP_03594054.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317183|ref|ZP_03598477.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. subtilis str. JH642] gi|221321446|ref|ZP_03602740.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. subtilis str. SMY] gi|321313787|ref|YP_004206074.1| 50S ribosomal protein L3 [Bacillus subtilis BSn5] gi|1710556|sp|P42920|RL3_BACSU RecName: Full=50S ribosomal protein L3; Short=BL3 gi|1165303|gb|AAC45956.1| L3 [Bacillus subtilis] gi|2632383|emb|CAB11892.1| ribosomal protein L3 (BL3) [Bacillus subtilis subsp. subtilis str. 168] gi|291482489|dbj|BAI83564.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. natto BEST195] gi|320020061|gb|ADV95047.1| 50S ribosomal protein L3 [Bacillus subtilis BSn5] Length = 209 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 92/212 (43%), Positives = 129/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQLGFDDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +PK+ + E R + D VG F+ G++VDVTG++ GKGF Sbjct: 61 SNKPEKGHVAKAETAPKRFVKELRGVEMDA-YEVGQEVKVEIFSAGEIVDVTGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH +HG S HR GS G DP RVFK K + GRMGG ++TV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPV-DPNRVFKGKLLPGRMGGEQITVQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGAKK S I V+ + KS Sbjct: 178 KVDAERNLLLIKGNVPGAKK-SLITVKSAVKS 208 >gi|323966282|gb|EGB61717.1| 50S ribosomal protein L3 [Escherichia coli M863] Length = 209 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 132/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVI 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|161506006|ref|YP_001573118.1| 50S ribosomal protein L3 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189029478|sp|A9MN46|RL3_SALAR RecName: Full=50S ribosomal protein L3 gi|160867353|gb|ABX23976.1| hypothetical protein SARI_04187 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 209 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 132/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGVKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLAEGEE-YTVGQSISVELFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA ++V+ + K+ Sbjct: 181 DAERNLLLVKGGVPGA-TGCDLIVKPAVKA 209 >gi|319405898|emb|CBI79530.1| 50S ribosomal protein L3 [Bartonella sp. AR 15-3] Length = 246 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 133/219 (60%), Positives = 162/219 (73%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT +YN G +PVTVL LD CQVV RT++KNGY AVQ+G G AK+KN Sbjct: 1 MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLDKCQVVAQRTVEKNGYTAVQLGVGLAKIKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ +RG F+ V PK K+ EFRV D +LL VG+ + +F GQ VDVTG++IGKGF Sbjct: 61 TSQALRGHFAKAVVEPKAKIAEFRVSPD-NLLGVGTEITVEHFVPGQRVDVTGISIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGRVRVTTQNIEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 S D RGLILV+G V G+ K SWILVRD+ K + Sbjct: 180 STDVDRGLILVRGSVSGS-KGSWILVRDAIKKPLPDNAP 217 >gi|212637954|ref|YP_002314474.1| 50S ribosomal protein L3 [Anoxybacillus flavithermus WK1] gi|212559434|gb|ACJ32489.1| Ribosomal protein L3 [Anoxybacillus flavithermus WK1] Length = 208 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 86/210 (40%), Positives = 124/210 (59%), Gaps = 4/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+Q+G + + K + Sbjct: 2 KGILGRKIGMTQVFAENGDLIPVTVIQATPNVVLQKKTIENDGYEAIQLGFEDLREKLAN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP +G + N +PK+ + E R + VG F G++VDVTG + GKGF G Sbjct: 62 KPQKGHAAKANTTPKRFIREIRGVNLAE-YEVGQEVKVDIFNEGEIVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH HG S HR GS G P RVFK+K++ GRMGG RVTV+NL+VV V Sbjct: 121 VIKRHGQSRGPMAHG-SRYHRRPGSMGPIA-PNRVFKSKELPGRMGGERVTVQNLKVVKV 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R LIL+KG VPG K ++++ + K+ Sbjct: 179 DPERNLILIKGNVPGPNKG-LVIIKSAVKA 207 >gi|260599639|ref|YP_003212210.1| 50S ribosomal protein L3 [Cronobacter turicensis z3032] gi|260218816|emb|CBA34171.1| 50S ribosomal protein L3 [Cronobacter turicensis z3032] Length = 209 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 97/210 (46%), Positives = 132/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ EG IPVTV+ ++ +V + L +GY AVQV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEEGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ D + VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRL-ADGEEFTVGQSISVELFAEVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|229542203|ref|ZP_04431263.1| ribosomal protein L3 [Bacillus coagulans 36D1] gi|229326623|gb|EEN92298.1| ribosomal protein L3 [Bacillus coagulans 36D1] Length = 209 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 88/212 (41%), Positives = 123/212 (58%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+Q+G + + Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTVETDGYEAIQLGFADKPERL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G S N +PK+ + EF D VG F G +VDVTG+T GKGF Sbjct: 61 ANKPEKGHVSKANAAPKRFIREFSGVNTSD-FEVGQEVKVDIFAEGDIVDVTGVTKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFK K + GRMGG RVTV+NL++V Sbjct: 120 QGVIKRHGQHRGPMAHG-SRYHRRPGSMGPIA-PNRVFKQKALPGRMGGERVTVQNLQIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPG +K + + V+ + K+ Sbjct: 178 KVDAERNLLLIKGNVPGPRK-ALVTVKAAVKA 208 >gi|307244784|ref|ZP_07526885.1| 50S ribosomal protein L3 [Peptostreptococcus stomatis DSM 17678] gi|306491882|gb|EFM63934.1| 50S ribosomal protein L3 [Peptostreptococcus stomatis DSM 17678] Length = 209 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 91/211 (43%), Positives = 128/211 (60%), Gaps = 4/211 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GMT V+ G +PVTV+ + +T++ +GY A+QVG +AK K ++ Sbjct: 2 KGILGKKIGMTQVFTENGEVVPVTVVEAGPVSITQIKTVENDGYQAIQVGFVDAKEKALN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP +G + V K+KL EFRV + VG F G+ +DVTG++ GKGF G Sbjct: 62 KPQKGHLAKAGV-LKRKLKEFRVDSLEG-YEVGQELKADIFAEGEKIDVTGISKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH THG S HR GS G PGRVFKNKK+AG MG +VTV+NLEVV V Sbjct: 120 PIKRHGQSRGPETHG-SRYHRRPGSMGACSYPGRVFKNKKLAGHMGSVKVTVQNLEVVKV 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++ L+L+KG +PGA K S + V+ + K + Sbjct: 179 DAEKNLLLIKGAIPGA-KGSVVTVKAAIKGS 208 >gi|89255670|ref|YP_513031.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica LVS] gi|115314171|ref|YP_762894.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica OSU18] gi|118496852|ref|YP_897902.1| 50S ribosomal protein L3 [Francisella tularensis subsp. novicida U112] gi|134302585|ref|YP_001122556.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis WY96-3418] gi|156501620|ref|YP_001427685.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009889|ref|ZP_02274820.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica FSC200] gi|187932143|ref|YP_001892128.1| 50S ribosomal protein L3 [Francisella tularensis subsp. mediasiatica FSC147] gi|290953211|ref|ZP_06557832.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica URFT1] gi|295313579|ref|ZP_06804168.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica URFT1] gi|109893430|sp|Q2A5H0|RL3_FRATH RecName: Full=50S ribosomal protein L3 gi|122325787|sp|Q0BNS7|RL3_FRATO RecName: Full=50S ribosomal protein L3 gi|166233143|sp|A7N9S6|RL3_FRATF RecName: Full=50S ribosomal protein L3 gi|166233144|sp|A0Q4I3|RL3_FRATN RecName: Full=50S ribosomal protein L3 gi|166233145|sp|A4IZT4|RL3_FRATW RecName: Full=50S ribosomal protein L3 gi|226725179|sp|B2SDY5|RL3_FRATM RecName: Full=50S ribosomal protein L3 gi|89143501|emb|CAJ78677.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica LVS] gi|115129070|gb|ABI82257.1| ribosomal protein L3 [Francisella tularensis subsp. holarctica OSU18] gi|118422758|gb|ABK89148.1| 50S ribosomal protein L3 [Francisella novicida U112] gi|134050362|gb|ABO47433.1| ribosomal protein L3 [Francisella tularensis subsp. tularensis WY96-3418] gi|156252223|gb|ABU60729.1| ribosomal protein L3 [Francisella tularensis subsp. holarctica FTNF002-00] gi|187713052|gb|ACD31349.1| 50S ribosomal protein L3 [Francisella tularensis subsp. mediasiatica FSC147] gi|328676321|gb|AEB27191.1| LSU ribosomal protein L3p (L3e) [Francisella cf. novicida Fx1] Length = 210 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 103/212 (48%), Positives = 139/212 (65%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ +G IPVTV+ ++ +V +T++K+GY A+QV G K N Sbjct: 1 MSLGLVGRKCGMTRIFTEDGVSIPVTVVQVEPNKVTQVKTVEKDGYNAIQVTTGFKKRSN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM G ++ +V P + L+EF V + VGS F + F GQ VDV G++ GKGF Sbjct: 61 VNKPMAGHYAKASVEPGRGLWEFTVDAAAE-YQVGSSFDATMFEAGQKVDVRGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRHNF ATHG S+SHR HGSTG Q PGRVFKNKKMAG +G VT+++LEVV Sbjct: 120 QGGVKRHNFATQDATHGNSLSHRVHGSTGQNQTPGRVFKNKKMAGHLGNENVTIQSLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + GL+L+KG +PG+ I+V + KS Sbjct: 180 RVDAENGLLLLKGGIPGSVGGD-IIVTPAVKS 210 >gi|289423692|ref|ZP_06425491.1| 50S ribosomal protein L3 [Peptostreptococcus anaerobius 653-L] gi|289155942|gb|EFD04608.1| 50S ribosomal protein L3 [Peptostreptococcus anaerobius 653-L] Length = 209 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 92/211 (43%), Positives = 129/211 (61%), Gaps = 4/211 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GMT V+ EG IPVTV+ V +TL+ +GY A+QVG +AK K ++ Sbjct: 2 KGILGKKIGMTQVFTEEGLVIPVTVVEAGPVAVTQIKTLENDGYEAIQVGYVDAKEKALN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP +G + V K+ L EFRV + VG FT G+ +DVTG++ GKGF G Sbjct: 62 KPQKGHLAKAGV-LKRHLKEFRVD-TVEGYEVGQEIKADLFTAGEKIDVTGISKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH +HG S HR GS G PGRVFKNKK+AG MG ++T++NLEVV V Sbjct: 120 PIKRHGQSRGPESHG-SRYHRRPGSMGACSYPGRVFKNKKLAGHMGSVKITIQNLEVVRV 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++ L+L+KG +PGA K S + V+ + K + Sbjct: 179 DAEKNLLLIKGAIPGA-KGSVVTVKAAIKGS 208 >gi|237747365|ref|ZP_04577845.1| 50S ribosomal protein L3 [Oxalobacter formigenes HOxBLS] gi|229378716|gb|EEO28807.1| 50S ribosomal protein L3 [Oxalobacter formigenes HOxBLS] Length = 222 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 96/216 (44%), Positives = 133/216 (61%), Gaps = 2/216 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GM ++ EG IPVTV+ + + +V +T + +GY AVQV G+ + Sbjct: 5 MSLGLIGRKVGMMRIFTDEGDSIPVTVVDVSDNRVTQVKTTETDGYAAVQVAFGKRRPSR 64 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G ++ V L EFRV + G V + F VGQ +DV G++IGKG Sbjct: 65 VNKAAAGHYAKAGVEAGTVLREFRVDATKAAEMKAGDVVPVTLFEVGQKIDVQGVSIGKG 124 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KRHNFG RATHG S+SH GS G QDPGRVF KKM G MG TV+NLE+ Sbjct: 125 YAGTIKRHNFGSGRATHGNSLSHNVPGSIGMNQDPGRVFPGKKMTGHMGDETRTVQNLEI 184 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +D +R L+LVKG VPGA KN+ ++V + K+ V+ Sbjct: 185 ARIDAERNLLLVKGAVPGA-KNAQVVVCPAVKTKVS 219 >gi|288554725|ref|YP_003426660.1| 50S ribosomal protein L3 [Bacillus pseudofirmus OF4] gi|288545885|gb|ADC49768.1| 50S ribosomal protein L3 [Bacillus pseudofirmus OF4] Length = 208 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 95/212 (44%), Positives = 130/212 (61%), Gaps = 5/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ + V+ +T++ +GY A+Q+G + K N Sbjct: 1 MTKGILGRKIGMTQVFAENGEVIPVTVIEAEPNVVLQKKTVESDGYEAIQIGFADQKKSN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G + N +PK+ + E ++ D L VG+ FT G +VDVTG + GKGF Sbjct: 61 TNKPQEGHAAKANTAPKRFMKE--IRNFDASLEVGNEVKVDTFTAGDVVDVTGTSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRHN +HG S HR GS G P RVFK K + GRMGG VTV+NLE+V Sbjct: 119 QGAIKRHNQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGETVTVQNLEIV 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD R L+LVKG VPGAKK S++ V+ + K+ Sbjct: 177 KVDTDRNLLLVKGNVPGAKK-SYVSVQSAVKA 207 >gi|325267188|ref|ZP_08133855.1| 50S ribosomal protein L3 [Kingella denitrificans ATCC 33394] gi|324981351|gb|EGC16996.1| 50S ribosomal protein L3 [Kingella denitrificans ATCC 33394] Length = 215 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 104/214 (48%), Positives = 135/214 (63%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V+ +G IPVTVL + +V ++ + +GY AVQV GE K + Sbjct: 1 MTLGLVGRKVGMTRVFTEQGESIPVTVLEMSANRVTQVKSKETDGYTAVQVTFGEKKTSH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF V ++ L G + F+ GQLVDVTG + GKG Sbjct: 61 VNKAQAGHFAKAGVEAGRGLHEFVVSEEKAAELKAGDSVTVELFSAGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV++LE+ Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKSTVQHLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V VD +R L+LVKG VPGA NS ++VR S K A Sbjct: 181 VRVDVERNLLLVKGAVPGAV-NSDVVVRHSVKKA 213 >gi|294789223|ref|ZP_06754462.1| 50S ribosomal protein L3 [Simonsiella muelleri ATCC 29453] gi|294482964|gb|EFG30652.1| 50S ribosomal protein L3 [Simonsiella muelleri ATCC 29453] Length = 215 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 103/214 (48%), Positives = 135/214 (63%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTVL + +V ++ + +GY AVQV GE K Sbjct: 1 MTLGLVGRKVGMTRIFTEQGESIPVTVLEMSTNRVTQVKSKETDGYTAVQVTFGEKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP G F+ V + L EF V ++ L G+V + F GQLVDVTG + GKG Sbjct: 61 VTKPEAGHFAKAGVEAGRGLHEFVVSEEKAAELKAGNVLTVELFQAGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV++LE+ Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKSTVQHLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V VD +R L+LVKG VPG+ NS ++V S K A Sbjct: 181 VRVDVERNLLLVKGAVPGSV-NSDVVVCHSVKKA 213 >gi|158319543|ref|YP_001512050.1| ribosomal protein L3 [Alkaliphilus oremlandii OhILAs] gi|189042830|sp|A8MLE0|RL3_ALKOO RecName: Full=50S ribosomal protein L3 gi|158139742|gb|ABW18054.1| ribosomal protein L3 [Alkaliphilus oremlandii OhILAs] Length = 210 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 91/209 (43%), Positives = 126/209 (60%), Gaps = 3/209 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V RK+GMT +++ G IPVTV+ ++ V +T++K+GY A+QVG G+ +NV+ Sbjct: 2 KGLVGRKIGMTQMFDETGLVIPVTVIEVEANAVTQVKTIEKDGYNAIQVGYGQINERNVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP +G F V+PK+ L EFR++ + G F G VD++G++ GKGF G Sbjct: 62 KPSKGHFDKAGVTPKRSLQEFRLESTEG-FTAGQELKADLFKAGDKVDISGVSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHN HG S HR GS G P RVFK KK+AG MG VT++NLEVV V Sbjct: 121 VIKRHNQSRGPMAHG-SRYHRGPGSMGAASYPSRVFKGKKLAGHMGHENVTIQNLEVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D +R L++VKG VPG KK + + S K Sbjct: 180 DVERNLLIVKGAVPGPKKG-LLTINTSIK 207 >gi|319404425|emb|CBI78028.1| 50S ribosomal protein L3 [Bartonella rochalimae ATCC BAA-1498] Length = 254 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 133/219 (60%), Positives = 161/219 (73%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+KLGMT +YN G +PVTVL LD CQV+ RT+ KNGY AVQ+G G AK+KN Sbjct: 9 MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLDKCQVIAQRTVKKNGYTAVQLGVGFAKIKN 68 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK +RG F+ V PK K+ EFRV D +LL VG+ + +F GQ VDVTG++IGKGF Sbjct: 69 TSKALRGHFAKAVVEPKAKIAEFRVSPD-NLLDVGTEITVEHFVPGQRVDVTGVSIGKGF 127 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EVV Sbjct: 128 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQARVTTQNIEVV 187 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 S D RGLILV+G V G+ K SWILVRD+ K + Sbjct: 188 STDVDRGLILVRGSVSGS-KGSWILVRDAIKKRLPDNAP 225 >gi|260893372|ref|YP_003239469.1| 50S ribosomal protein L3 [Ammonifex degensii KC4] gi|260865513|gb|ACX52619.1| 50S ribosomal protein L3 [Ammonifex degensii KC4] Length = 209 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 88/210 (41%), Positives = 124/210 (59%), Gaps = 4/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +KLGMT + G + VTV+ C VV + + +GY A+QVG E V+ Sbjct: 2 KGILGKKLGMTQYFTPAGEAMAVTVIKAGPCVVVQTKNRETDGYEAIQVGFEEIPEHRVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+RG F+ + P + L EFRV D VG F+ G+ VDVTG++ GKGF+G Sbjct: 62 KPLRGHFARAGLKPLRYLREFRV-PDASAYTVGQEIKVDIFSPGEKVDVTGISKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH F +HG S HR GS G + P RVFK +K+ G MG RVTV+NLEVV V Sbjct: 121 GIKRHGFSRGPMSHG-SKYHRRPGSLGAKG-PARVFKGRKLPGHMGMERVTVQNLEVVKV 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L++VKG VPG + ++++ + K+ Sbjct: 179 DPERNLLVVKGAVPGP-RGGLLIIKQAVKA 207 >gi|190891355|ref|YP_001977897.1| 50S ribosomal protein L3 [Rhizobium etli CIAT 652] gi|226730554|sp|B3PWS1|RL3_RHIE6 RecName: Full=50S ribosomal protein L3 gi|190696634|gb|ACE90719.1| 50S ribosomal protein L3 [Rhizobium etli CIAT 652] gi|327191386|gb|EGE58412.1| 50S ribosomal protein L3 [Rhizobium etli CNPAF512] Length = 213 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 147/215 (68%), Positives = 172/215 (80%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G +PVTVL +D CQVV RT++KNGY AVQ+GAG+AKVKN Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMDGCQVVATRTVEKNGYTAVQLGAGQAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ NV PK KL EFRV +D +LL +G+ +F GQLVDVTG TIGKGF Sbjct: 61 TSKAMRGNFAVANVEPKAKLAEFRVSED-NLLEIGTELKAGHFAAGQLVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 S D+ RGLIL+KG VPG+ K +WI+VRD+ KSA Sbjct: 180 STDEDRGLILIKGAVPGS-KGAWIIVRDAVKSAAK 213 >gi|116251540|ref|YP_767378.1| 50S ribosomal protein L3 [Rhizobium leguminosarum bv. viciae 3841] gi|123261675|sp|Q1MIE1|RL3_RHIL3 RecName: Full=50S ribosomal protein L3 gi|115256188|emb|CAK07269.1| putative 50S ribosomal protein L3 [Rhizobium leguminosarum bv. viciae 3841] Length = 213 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 147/215 (68%), Positives = 171/215 (79%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G +PVTVL ++ CQVV RT++KNGY AVQ+GAG+AKVKN Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMEGCQVVATRTVEKNGYTAVQLGAGQAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ NV PK KL EFRV +D LL VG+ +F GQLVDVTG TIGKGF Sbjct: 61 TSKAMRGNFAIANVEPKAKLTEFRVSEDQ-LLEVGTEIKAGHFAAGQLVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 S D+ RGLIL+KG VPG+ K +WI+VRD+ KSA Sbjct: 180 STDEDRGLILIKGAVPGS-KGAWIIVRDAVKSAAK 213 >gi|42559604|sp|Q7VTD3|RL3_BORPE RecName: Full=50S ribosomal protein L3 gi|42559605|sp|Q7W2F6|RL3_BORPA RecName: Full=50S ribosomal protein L3 gi|42559606|sp|Q7WRC5|RL3_BORBR RecName: Full=50S ribosomal protein L3 gi|33564827|emb|CAE39770.1| 50S ribosomal protein L3 [Bordetella parapertussis] gi|33575068|emb|CAE30531.1| 50S ribosomal protein L3 [Bordetella bronchiseptica RB50] Length = 233 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 95/216 (43%), Positives = 127/216 (58%), Gaps = 3/216 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+V RK+GMT ++ +G IPVTVL + N +V ++L+ +GY A+QV G + V Sbjct: 16 RLGLVGRKVGMTRIFTEDGESIPVTVLDVSNNRVTQVKSLESDGYAAIQVTYGTRRATRV 75 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP--SYFTVGQLVDVTGMTIGKG 119 KP G ++ L EFR+ S F GQ VDVTG +IGKG Sbjct: 76 VKPQAGHYAKAGAEAGSILKEFRLDPARAAEFAAGAVIAVESVFEAGQQVDVTGTSIGKG 135 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRHNFG RA+HG S SHR GS G QDPGR+F K+M+G MG TV+NL+V Sbjct: 136 FAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMSGHMGDVTRTVQNLDV 195 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 V VD +RGL++VKG VPG ++VR + K+ Sbjct: 196 VRVDAERGLLMVKGAVPG-HAGGDVIVRPAVKAPAK 230 >gi|161609283|ref|NP_886582.2| 50S ribosomal protein L3 [Bordetella bronchiseptica RB50] gi|161610405|ref|NP_882394.2| 50S ribosomal protein L3 [Bordetella parapertussis 12822] gi|161610757|ref|NP_882123.2| 50S ribosomal protein L3 [Bordetella pertussis Tohama I] Length = 229 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 95/216 (43%), Positives = 127/216 (58%), Gaps = 3/216 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+V RK+GMT ++ +G IPVTVL + N +V ++L+ +GY A+QV G + V Sbjct: 12 RLGLVGRKVGMTRIFTEDGESIPVTVLDVSNNRVTQVKSLESDGYAAIQVTYGTRRATRV 71 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP--SYFTVGQLVDVTGMTIGKG 119 KP G ++ L EFR+ S F GQ VDVTG +IGKG Sbjct: 72 VKPQAGHYAKAGAEAGSILKEFRLDPARAAEFAAGAVIAVESVFEAGQQVDVTGTSIGKG 131 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRHNFG RA+HG S SHR GS G QDPGR+F K+M+G MG TV+NL+V Sbjct: 132 FAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMSGHMGDVTRTVQNLDV 191 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 V VD +RGL++VKG VPG ++VR + K+ Sbjct: 192 VRVDAERGLLMVKGAVPG-HAGGDVIVRPAVKAPAK 226 >gi|23097574|ref|NP_691040.1| 50S ribosomal protein L3 [Oceanobacillus iheyensis HTE831] gi|42559644|sp|Q8ETY2|RL3_OCEIH RecName: Full=50S ribosomal protein L3 gi|22775797|dbj|BAC12075.1| 50S ribosomal protein L3 [Oceanobacillus iheyensis HTE831] Length = 209 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 123/212 (58%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT +++ G IPVTV+ + V+ +TL+ +GY A+Q+G + K Sbjct: 1 MTKGILGRKIGMTQLFSDNGELIPVTVIQAEPNVVLQKKTLENDGYEALQIGFADKKESR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +K +G +PK+ + E R + + VG F G+ +DVTG + GKGF Sbjct: 61 TNKAEKGHAEKAGTAPKRYVREIRG-AEVNSFEVGQEIKVDIFESGEKIDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH THG HR+ G+ G DP RVFK KK+ G MG +VT++NLEVV Sbjct: 120 QGVIKRHGQQRGPTTHGSH-FHRAPGAMGVI-DPMRVFKGKKLPGHMGSEQVTIQNLEVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 SVD + L+L+KG VPGAKK S++ + + K Sbjct: 178 SVDTDKNLLLIKGNVPGAKK-SYVKITSAVKG 208 >gi|319783320|ref|YP_004142796.1| 50S ribosomal protein L3 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169208|gb|ADV12746.1| 50S ribosomal protein L3 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 242 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 130/219 (59%), Positives = 163/219 (74%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT +YN G +PVTVL ++NCQVV RT +KNGY AVQ+G G AKVKN Sbjct: 1 MRSGVIAKKVGMTRIYNDAGEHVPVTVLLMENCQVVAQRTQEKNGYTAVQLGVGLAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F++ +V PK K+ EFRV D +++ VG+ + +F GQ VDVTG TIGKGF Sbjct: 61 TSKAMRGHFATASVEPKAKVAEFRVSAD-NMIDVGAEITVEHFVAGQKVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH+ GG RATHG S+SHR+HGSTG RQDPG+VFK K MAG MG RVT +N+E+V Sbjct: 120 QGVIKRHHMGGGRATHGNSVSHRTHGSTGQRQDPGKVFKGKHMAGHMGDTRVTTQNVEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 S D RGLIL++G VPG+ K +WILVRD+ K A+ Sbjct: 180 STDADRGLILIRGAVPGS-KGAWILVRDAAKVALPANAP 217 >gi|152972227|ref|YP_001337373.1| 50S ribosomal protein L3 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206576036|ref|YP_002236281.1| ribosomal protein L3 [Klebsiella pneumoniae 342] gi|238896816|ref|YP_002921561.1| 50S ribosomal protein L3 [Klebsiella pneumoniae NTUH-K2044] gi|262045177|ref|ZP_06018204.1| 50S ribosomal protein L3 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288933266|ref|YP_003437325.1| 50S ribosomal protein L3 [Klebsiella variicola At-22] gi|290512069|ref|ZP_06551437.1| 50S ribosomal protein L3 [Klebsiella sp. 1_1_55] gi|330002294|ref|ZP_08304288.1| 50S ribosomal protein L3 [Klebsiella sp. MS 92-3] gi|166233150|sp|A6TEX2|RL3_KLEP7 RecName: Full=50S ribosomal protein L3 gi|226730525|sp|B5XN94|RL3_KLEP3 RecName: Full=50S ribosomal protein L3 gi|150957076|gb|ABR79106.1| 50S ribosomal protein L3 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206565094|gb|ACI06870.1| ribosomal protein L3 [Klebsiella pneumoniae 342] gi|238549143|dbj|BAH65494.1| 50S ribosomal protein L3 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259037497|gb|EEW38741.1| 50S ribosomal protein L3 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288887995|gb|ADC56313.1| 50S ribosomal protein L3 [Klebsiella variicola At-22] gi|289775859|gb|EFD83859.1| 50S ribosomal protein L3 [Klebsiella sp. 1_1_55] gi|328537367|gb|EGF63617.1| 50S ribosomal protein L3 [Klebsiella sp. MS 92-3] Length = 209 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 132/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ D + VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRL-ADGEEFTVGQNISVELFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|114561336|ref|YP_748849.1| 50S ribosomal protein L3 [Shewanella frigidimarina NCIMB 400] gi|122301115|sp|Q089Q4|RL3_SHEFN RecName: Full=50S ribosomal protein L3 gi|114332629|gb|ABI70011.1| LSU ribosomal protein L3P [Shewanella frigidimarina NCIMB 400] Length = 212 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 89/213 (41%), Positives = 128/213 (60%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G IPVTV+ + +V +TL+ +GY A+QV G K Sbjct: 1 MAIGLIGRKVGMTRIFTEDGTSIPVTVIEIAGNRVTQVKTLETDGYRALQVTTGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++K G F+ V + L+E R+ + + + VG+ + F VDVTG + GKG Sbjct: 61 ITKAEAGHFAKGGVEAGRGLWEMRLADGEGEGIEVGAEINVDIFADTVKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF THG S++HRS+GS G Q PGRVFK KKM+G MG +VT +NL V Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAEQVTTQNLHV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LV+G VPGA I ++ + K+ Sbjct: 181 VRVDAERNLLLVRGAVPGATNGDLI-IKPAVKA 212 >gi|297717842|gb|ADI50064.1| LSU ribosomal protein L3p [Candidatus Odyssella thessalonicensis L13] Length = 213 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 115/215 (53%), Positives = 155/215 (72%), Gaps = 3/215 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVK 59 MR+G++A K+GMT + +G +PVTVL + +C VV +T D K+GY AVQ+G+ +AK+ Sbjct: 1 MRTGLIAEKVGMTQFFAADGTLVPVTVLQVSDCVVVGKKTADSKDGYNAVQIGSNKAKIN 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV+KPMR FF+ + P+ L EFRV + +LL G+ +F GQ VDVTG +IGKG Sbjct: 61 NVTKPMREFFAKKEIEPRAHLKEFRVSSE-NLLEPGAELKADHFAAGQFVDVTGTSIGKG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+GAMKRHNFGGLRA+HGVS++HRSHGSTG RQDPG+VFKNKKMAG MG RVT NL + Sbjct: 120 FAGAMKRHNFGGLRASHGVSVTHRSHGSTGNRQDPGKVFKNKKMAGHMGARRVTKMNLTI 179 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 +D ++ LI ++G VPG++ + VRD+ K + Sbjct: 180 YGIDAEKNLIFIRGSVPGSQ-GGIVYVRDAIKKSA 213 >gi|113460208|ref|YP_718265.1| 50S ribosomal protein L3 [Haemophilus somnus 129PT] gi|170718246|ref|YP_001785266.1| 50S ribosomal protein L3 [Haemophilus somnus 2336] gi|122945127|sp|Q0I163|RL3_HAES1 RecName: Full=50S ribosomal protein L3 gi|189042848|sp|B0UX13|RL3_HAES2 RecName: Full=50S ribosomal protein L3 gi|112822251|gb|ABI24340.1| LSU ribosomal protein L3P [Haemophilus somnus 129PT] gi|168826375|gb|ACA31746.1| ribosomal protein L3 [Haemophilus somnus 2336] Length = 208 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 99/210 (47%), Positives = 133/210 (63%), Gaps = 3/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V RK+GMT ++N +G IPVTV+ ++ +V +TL+ +GY AVQV G K V+ Sbjct: 2 IGLVGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTLENDGYTAVQVTTGFKKASRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V + L+EFR + + +G + FT + VDVTG + GKGF G Sbjct: 62 KPEAGHFVKAGVEAGRGLWEFRTEG--EEFTLGQEINVDIFTDVKKVDVTGTSKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LE+V V Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEIVRV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA NS ++V+ + K+ Sbjct: 180 DVERKLLLVKGSVPGA-TNSDVIVKPAVKA 208 >gi|322831072|ref|YP_004211099.1| 50S ribosomal protein L3 [Rahnella sp. Y9602] gi|321166273|gb|ADW71972.1| 50S ribosomal protein L3 [Rahnella sp. Y9602] Length = 209 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 132/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + LD +GY AVQV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLDNDGYRAVQVTTGSKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ + ++ G S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-AGQNISVEIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA + I V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGATGGNLI-VKPAVKA 209 >gi|329122783|ref|ZP_08251355.1| 50S ribosomal protein L3 [Haemophilus aegyptius ATCC 11116] gi|327472047|gb|EGF17485.1| 50S ribosomal protein L3 [Haemophilus aegyptius ATCC 11116] Length = 208 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 97/210 (46%), Positives = 131/210 (62%), Gaps = 3/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V RK+GMT ++N +G +PVTV+ ++ +V +TL+ +GY AVQV G K V+ Sbjct: 2 IGLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSRKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V + L+EFR + + +G + F + VDVTG + GKGF G Sbjct: 62 KPEAGHFVKAGVEAGRGLWEFRTEG--EEFTLGQEINVDIFADVKKVDVTGTSKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV V Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA N ++V+ + K+ Sbjct: 180 DAERKLLLVKGSVPGAI-NGDVIVKPAVKA 208 >gi|311029049|ref|ZP_07707139.1| 50S ribosomal protein L3 [Bacillus sp. m3-13] Length = 206 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 90/212 (42%), Positives = 127/212 (59%), Gaps = 7/212 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+Q+G + + K Sbjct: 1 MTKGILGRKVGMTQVFAENGDLIPVTVIEATPNVVLQVKTVETDGYEAIQIGFADKRDKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP++G + N +PK+ + E L VG F G +VDVTG++ GKGF Sbjct: 61 ANKPLKGHVAKANTAPKRFIREISGAN----LEVGQEVKVDIFAEGDVVDVTGISKGKGF 116 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G++KRHN THG S HR GS G P RVFK K + GRMGG R+T++NLE+V Sbjct: 117 QGSIKRHNQSRGPMTHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGERITIQNLEIV 174 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPG KK S I ++ + K+ Sbjct: 175 KVDAERNLLLVKGNVPGPKK-SLITIKSAIKA 205 >gi|282855208|ref|ZP_06264540.1| 50S ribosomal protein L3 [Propionibacterium acnes J139] gi|282581796|gb|EFB87181.1| 50S ribosomal protein L3 [Propionibacterium acnes J139] gi|314924185|gb|EFS88016.1| 50S ribosomal protein L3 [Propionibacterium acnes HL001PA1] gi|314965095|gb|EFT09194.1| 50S ribosomal protein L3 [Propionibacterium acnes HL082PA2] gi|314982251|gb|EFT26344.1| 50S ribosomal protein L3 [Propionibacterium acnes HL110PA3] gi|315090438|gb|EFT62414.1| 50S ribosomal protein L3 [Propionibacterium acnes HL110PA4] gi|315093673|gb|EFT65649.1| 50S ribosomal protein L3 [Propionibacterium acnes HL060PA1] gi|315103967|gb|EFT75943.1| 50S ribosomal protein L3 [Propionibacterium acnes HL050PA2] gi|327326712|gb|EGE68498.1| 50S ribosomal protein L3 [Propionibacterium acnes HL103PA1] Length = 223 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 101/213 (47%), Positives = 130/213 (61%), Gaps = 2/213 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGMT +++ R +PVTV+ C V RT + +GY AVQ+G G K K V+ Sbjct: 8 KGVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKKVT 67 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P++ L E R D +G + F+ VDVTG + GKG +G Sbjct: 68 KPEAGHFEKAGVTPRRHLVELR-TADASEYTLGQEIAADVFSESDFVDVTGTSKGKGTAG 126 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGGLRATHGV HRS GS G PG+V K +MAGRMG RVTV+NL+V SV Sbjct: 127 VMKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQNLQVHSV 186 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D +RG++LV+G VPG K S ++VR + K A Sbjct: 187 DAERGIMLVRGAVPGP-KGSLLVVRSAAKKAAK 218 >gi|291544460|emb|CBL17569.1| LSU ribosomal protein L3P [Ruminococcus sp. 18P13] Length = 211 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 92/213 (43%), Positives = 133/213 (62%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M+ G++ +K+GMT +++ G+ IPVTV+ C VV +T++ +GY A+Q+G + K + Sbjct: 1 MQKGIIGKKIGMTQIFDQEAGKVIPVTVVEAGPCVVVQKKTVENDGYAALQIGFDDVKAQ 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KPM+G F V K+ L EFR+ D D L VG + F VG +VDV+G + GKG Sbjct: 61 RINKPMKGHFDKSEVGYKRVLKEFRLD-DCDALNVGDLLKADTFAVGDIVDVSGTSKGKG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+GA+KRHN L+ THG HR GS G P R++K K MAG MG +VTV+NLEV Sbjct: 120 FTGAIKRHNQHRLKETHGTGPVHRQAGSMGACSSPSRIYKGKGMAGHMGAEKVTVQNLEV 179 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V +D + LI +KG +PG K + + DS K+ Sbjct: 180 VKIDVENNLIALKGAIPGP-KGGVVCITDSVKA 211 >gi|237666933|ref|ZP_04526918.1| 50S ribosomal protein L3 [Clostridium butyricum E4 str. BoNT E BL5262] gi|237658132|gb|EEP55687.1| 50S ribosomal protein L3 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 209 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 126/212 (59%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT +++ G+ +PVTV+ C VV +TL+ +GY A+QVG E + K Sbjct: 1 MKKAIIGKKIGMTQIFDENGKVVPVTVVEAGPCVVVQKKTLENDGYEAIQVGFEEIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G F+ VS ++ L EFR+ +D VG F G VDV+ ++ GKGF Sbjct: 61 ANKPRKGQFAKAGVSIRRTLKEFRL-EDITSYEVGQEIKADVFEAGDKVDVSAVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR N THG S HR+ GS G DP R FKNK+M G MG TV NL+VV Sbjct: 120 QGCIKRWNQQRGPMTHG-SKFHRAPGSMGASSDPSRTFKNKRMPGHMGSVNTTVLNLQVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ LIL+KG +PG K + + ++++ ++ Sbjct: 179 KVIAEKNLILIKGGIPGPNKGTVV-IKNTVRA 209 >gi|144900884|emb|CAM77748.1| 50S ribosomal protein L3 [Magnetospirillum gryphiswaldense MSR-1] Length = 230 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 128/215 (59%), Positives = 164/215 (76%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GMT ++ +G +PVTVL +D QVV R+++K+GY AVQ+GAG AKVKN Sbjct: 1 MRSGLIAQKVGMTRIFTEDGTHVPVTVLKVDTVQVVSTRSVEKDGYTAVQLGAGTAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K R F++ V PKKKL EFRV + ++L VG S ++F GQ VD+TG TIGKGF Sbjct: 61 VAKAQRTTFANAKVEPKKKLVEFRVAPE-NVLEVGVELSAAHFIPGQFVDITGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NF GL ATHGVS+SHRSHGSTG RQDPG+VFK KKMAG MG +VT +NL+VV Sbjct: 120 AGGMKRWNFRGLEATHGVSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDEQVTTQNLKVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 S D +RGLILVKG VPG++ SW+LV+D+ K + Sbjct: 180 STDVERGLILVKGSVPGSE-GSWVLVKDAVKRKLP 213 >gi|224005591|ref|XP_002291756.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220972275|gb|EED90607.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 232 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 109/214 (50%), Positives = 136/214 (63%), Gaps = 4/214 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVKN 60 R G + KLGM +++ G R P TVL+LDN VV ++ D +GY AVQ+GAGE K KN Sbjct: 20 RCGALGIKLGMMPLWDKWGERHPCTVLYLDNNVVVRTKSKDSVDGYDAVQIGAGERKAKN 79 Query: 61 VSKPMRGFFSSVNVS--PKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 V+KP+ ++ V+ P + EFRV D + P GS +F GQ VD+ G + GK Sbjct: 80 VNKPLMCHYAKFGVNENPPYVVREFRVTTPDAMPPPGSKIHARHFVPGQNVDIAGTSKGK 139 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G MKRH F G+ ATHG S SHR+ GSTG QDPGRVFK KKM GRMGG RVT +NL Sbjct: 140 GFQGGMKRHGFKGMPATHGTSKSHRAIGSTGQCQDPGRVFKGKKMPGRMGGVRVTKQNLR 199 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VV +D R LI VKG VPG K ++ +RD+ K Sbjct: 200 VVKIDRGRNLIYVKGAVPG-NKGEFVEIRDAVKK 232 >gi|86749415|ref|YP_485911.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris HaA2] gi|109893547|sp|Q2IXR0|RL3_RHOP2 RecName: Full=50S ribosomal protein L3 gi|86572443|gb|ABD07000.1| LSU ribosomal protein L3P [Rhodopseudomonas palustris HaA2] Length = 241 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 128/219 (58%), Positives = 159/219 (72%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G IPVTVL L NCQV+ HRT +KNGY+A+Q+G+G K Sbjct: 1 MRSGVIAQKVGMTRVFTETGEHIPVTVLKLGNCQVLAHRTTEKNGYVALQLGSGARKTVY 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + K RG F+ V PK+K+ EFRV +D L+PVG+ +F VGQ VDVTG ++GKGF Sbjct: 61 MPKAERGQFAVAKVEPKRKVAEFRVSED-ALIPVGAEIQADHFVVGQFVDVTGTSVGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T NL VV Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 +D +RGLILV+G VPG+ K WI VRD+ K A+ Sbjct: 180 QLDVERGLILVEGAVPGS-KGGWISVRDAVKKALPADAP 217 >gi|294669824|ref|ZP_06734883.1| hypothetical protein NEIELOOT_01717 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308217|gb|EFE49460.1| hypothetical protein NEIELOOT_01717 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 214 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGASVPVTVLEMTPNRVTQLKSEDADGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF V + L G + + F GQLVDVTG + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLVEFAVSAEKAAELQAGGEVTVALFEAGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNF R +HG S SHR GS G QDPGRVF ++MAG+ G + TV+NLE+ Sbjct: 121 FSGTIKRHNFDSQRTSHGNSRSHRVPGSIGMAQDPGRVFPGQRMAGQYGNTKATVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPGA NS ++VR S K Sbjct: 181 VRVDVERHLLLVKGAVPGAV-NSDVIVRPSVK 211 >gi|291460718|ref|ZP_06600108.1| 50S ribosomal protein L3 [Oribacterium sp. oral taxon 078 str. F0262] gi|291416677|gb|EFE90396.1| 50S ribosomal protein L3 [Oribacterium sp. oral taxon 078 str. F0262] Length = 209 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 82/212 (38%), Positives = 118/212 (55%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT +++ G IPVTVL C V +TL+ +GY AVQVG + + + Sbjct: 1 MKKAILAIKVGMTQIWDENGILIPVTVLQAGPCVVTQVKTLENDGYKAVQVGFQDKRERL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++P +G F V K+ + EFR + ++ P F G VDVT ++ GKGF Sbjct: 61 VNRPEKGQFDKAGVPCKRFVREFRFENSEEYKP-KDEIKADIFAAGDKVDVTAVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 A++++ HG S HR GS G P RV K M MG RVT +NL VV Sbjct: 120 QSAIRKYGQHRGPMAHG-SKFHRHQGSNGTSATPSRVLPGKGMPSHMGAVRVTTQNLSVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + GLIL+KG VPG KK + + V+++ K+ Sbjct: 179 RVDAENGLILIKGAVPGPKK-ALVTVKEAVKA 209 >gi|16272718|ref|NP_438936.1| 50S ribosomal protein L3 [Haemophilus influenzae Rd KW20] gi|68249373|ref|YP_248485.1| 50S ribosomal protein L3 [Haemophilus influenzae 86-028NP] gi|145630522|ref|ZP_01786302.1| acetyl-CoA:acetoacetyl-CoA transferase subunit alpha [Haemophilus influenzae R3021] gi|145632130|ref|ZP_01787865.1| acetyl-CoA:acetoacetyl-CoA transferase subunit alpha [Haemophilus influenzae 3655] gi|145634812|ref|ZP_01790520.1| 50S ribosomal protein L3 [Haemophilus influenzae PittAA] gi|145636667|ref|ZP_01792334.1| 50S ribosomal protein L3 [Haemophilus influenzae PittHH] gi|145638423|ref|ZP_01794033.1| 50S ribosomal protein L3 [Haemophilus influenzae PittII] gi|229844644|ref|ZP_04464783.1| 50S ribosomal protein L3 [Haemophilus influenzae 6P18H1] gi|229845827|ref|ZP_04465939.1| 50S ribosomal protein L3 [Haemophilus influenzae 7P49H1] gi|260579868|ref|ZP_05847698.1| 50S ribosomal protein L3 [Haemophilus influenzae RdAW] gi|260581595|ref|ZP_05849392.1| 50S ribosomal protein L3 [Haemophilus influenzae NT127] gi|319775289|ref|YP_004137777.1| 50S ribosomal subunit protein L3 [Haemophilus influenzae F3047] gi|319897729|ref|YP_004135926.1| 50S ribosomal subunit protein l3 [Haemophilus influenzae F3031] gi|325577127|ref|ZP_08147611.1| 50S ribosomal protein L3 [Haemophilus parainfluenzae ATCC 33392] gi|1173047|sp|P44344|RL3_HAEIN RecName: Full=50S ribosomal protein L3 gi|81336200|sp|Q4QMC2|RL3_HAEI8 RecName: Full=50S ribosomal protein L3 gi|1573787|gb|AAC22436.1| ribosomal protein L3 (rpL3) [Haemophilus influenzae Rd KW20] gi|68057572|gb|AAX87825.1| 50S ribosomal protein L3 [Haemophilus influenzae 86-028NP] gi|144983912|gb|EDJ91354.1| acetyl-CoA:acetoacetyl-CoA transferase subunit alpha [Haemophilus influenzae R3021] gi|144987037|gb|EDJ93567.1| acetyl-CoA:acetoacetyl-CoA transferase subunit alpha [Haemophilus influenzae 3655] gi|145267978|gb|EDK07974.1| 50S ribosomal protein L3 [Haemophilus influenzae PittAA] gi|145270193|gb|EDK10129.1| 50S ribosomal protein L3 [Haemophilus influenzae PittHH] gi|145272752|gb|EDK12659.1| 50S ribosomal protein L3 [Haemophilus influenzae PittII] gi|229810831|gb|EEP46548.1| 50S ribosomal protein L3 [Haemophilus influenzae 7P49H1] gi|229812358|gb|EEP48048.1| 50S ribosomal protein L3 [Haemophilus influenzae 6P18H1] gi|260093152|gb|EEW77085.1| 50S ribosomal protein L3 [Haemophilus influenzae RdAW] gi|260095188|gb|EEW79079.1| 50S ribosomal protein L3 [Haemophilus influenzae NT127] gi|301155330|emb|CBW14796.1| 50S ribosomal subunit protein L3 [Haemophilus parainfluenzae T3T1] gi|301169494|emb|CBW29095.1| 50S ribosomal subunit protein L3 [Haemophilus influenzae 10810] gi|309751562|gb|ADO81546.1| 50S ribosomal protein L3 [Haemophilus influenzae R2866] gi|309973732|gb|ADO96933.1| 50S ribosomal protein L3 [Haemophilus influenzae R2846] gi|317433235|emb|CBY81610.1| 50S ribosomal subunit protein L3 [Haemophilus influenzae F3031] gi|317449880|emb|CBY86091.1| 50S ribosomal subunit protein L3 [Haemophilus influenzae F3047] gi|325160709|gb|EGC72830.1| 50S ribosomal protein L3 [Haemophilus parainfluenzae ATCC 33392] Length = 208 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 97/210 (46%), Positives = 132/210 (62%), Gaps = 3/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V RK+GMT ++N +G +PVTV+ ++ +V +TL+ +GY AVQV G K V+ Sbjct: 2 IGLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V + L+EFR + ++ +G + F + VDVTG + GKGF G Sbjct: 62 KPEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV V Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA N ++V+ + K+ Sbjct: 180 DAERKLLLVKGSVPGAI-NGDVIVKPAVKA 208 >gi|260579267|ref|ZP_05847151.1| 50S ribosomal protein L3 [Corynebacterium jeikeium ATCC 43734] gi|258602619|gb|EEW15912.1| 50S ribosomal protein L3 [Corynebacterium jeikeium ATCC 43734] Length = 218 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 91/214 (42%), Positives = 125/214 (58%), Gaps = 2/214 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +KLGMT +++ E R +PVTV+ C V RT + +GY AVQ+ GE + V+ Sbjct: 7 KGILGKKLGMTQIFDEENRVVPVTVVEAGPCVVTQVRTKETDGYEAVQIAFGEIDPRKVN 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P++ + E RV D VG + F + VDVTG T GKG++G Sbjct: 67 KPAAGHFKKAGVTPRRHVAEIRV-ADASSYEVGQDVTVDIFNDVKFVDVTGTTKGKGYAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G A HG +HR GS G PGRVFK K+MAGRMG +RVT +NL+V V Sbjct: 126 GMKRHGFAGQGAAHGNQAAHRRVGSIGQAATPGRVFKGKRMAGRMGNDRVTQQNLKVAKV 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D + L+L+KG VPG ++V+ + K + Sbjct: 186 DAESNLLLIKGAVPGVN-GGLVVVKTAVKGGAHA 218 >gi|227115272|ref|ZP_03828928.1| 50S ribosomal protein L3 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 209 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 94/210 (44%), Positives = 131/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A QV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAAQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRTLREFRLSEGEEFT-VGQSISVEIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|119773354|ref|YP_926094.1| 50S ribosomal protein L3 [Shewanella amazonensis SB2B] gi|166234590|sp|A1S218|RL3_SHEAM RecName: Full=50S ribosomal protein L3 gi|119765854|gb|ABL98424.1| LSU ribosomal protein L3P [Shewanella amazonensis SB2B] Length = 212 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 92/213 (43%), Positives = 128/213 (60%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G IPVTV+ ++ +V +TL+ +GY A+QV G K Sbjct: 1 MAIGLIGRKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKTLENDGYRALQVTTGAKKAHR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV-FSPSYFTVGQLVDVTGMTIGKG 119 V+KP G F+ V + L+E R+ + + + F Q VDVTG + GKG Sbjct: 61 VTKPEAGHFAKAGVEAGRGLWEMRLGEGEGEGIEVGAELNVEIFADVQKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF THG S+SHR++GS G Q PGRVFK KKM+G MG RVT +NL+V Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLSHRANGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LVKG VPGA I ++ + K+ Sbjct: 181 VRVDVERNLLLVKGAVPGATNGDLI-IKPAVKA 212 >gi|322515635|ref|ZP_08068613.1| 50S ribosomal protein L3 [Actinobacillus ureae ATCC 25976] gi|322118286|gb|EFX90569.1| 50S ribosomal protein L3 [Actinobacillus ureae ATCC 25976] Length = 208 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 99/210 (47%), Positives = 133/210 (63%), Gaps = 3/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV G K V+ Sbjct: 2 IGLVGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDGYSAIQVTTGTKKASRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V + L+EFR + + +G + FT + VDVTG + GKGF+G Sbjct: 62 KPEAGHFVKAGVEAGRGLWEFRTEG--EEFTLGQEINIDIFTDVKKVDVTGTSKGKGFAG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV V Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA NS ++V+ + K+ Sbjct: 180 DAERKLLLVKGAVPGA-TNSDVIVKPAVKA 208 >gi|303256450|ref|ZP_07342464.1| 50S ribosomal protein L3 [Burkholderiales bacterium 1_1_47] gi|331000644|ref|ZP_08324297.1| 50S ribosomal protein L3 [Parasutterella excrementihominis YIT 11859] gi|302859941|gb|EFL83018.1| 50S ribosomal protein L3 [Burkholderiales bacterium 1_1_47] gi|329570856|gb|EGG52567.1| 50S ribosomal protein L3 [Parasutterella excrementihominis YIT 11859] Length = 216 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 98/214 (45%), Positives = 134/214 (62%), Gaps = 2/214 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 + G+V RK+GMT ++ +G IPVTVL + N ++ +T++ +GY AVQV G K V Sbjct: 4 KLGLVGRKIGMTRIFTEDGVSIPVTVLEVSNNRITQVKTVETDGYNAVQVAFGSKKPSRV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SKP++G F V L EF V++D + VG S F+ GQ VDVTG TIGKGF Sbjct: 64 SKPLKGQFEKAGVEAGSMLKEFHVEEDKIGEMKVGQTLSIDMFSEGQKVDVTGTTIGKGF 123 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GA+KRH+F RA+HG S+S + GS G RQDPGRVF K+MAG +G + T +NL + Sbjct: 124 AGAIKRHHFSSNRASHGNSVSTNAPGSIGNRQDPGRVFPGKRMAGHLGDVQRTTQNLVIA 183 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 VD R LILV+G VPG N +++R + K+ Sbjct: 184 RVDADRQLILVRGAVPGCA-NGEVIIRPAVKAKA 216 >gi|319443065|ref|ZP_07992221.1| 50S ribosomal protein L3 [Corynebacterium variabile DSM 44702] Length = 218 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 87/214 (40%), Positives = 124/214 (57%), Gaps = 2/214 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +KLGMT +++ E R +PVTV+ C V RT D +GY AVQ+ G+ + V Sbjct: 7 KGILGKKLGMTQIFDEENRVVPVTVVEAGPCVVTQVRTKDTDGYEAVQIAFGDIDPRKVK 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P++ + E RV +D VG + F VDVTG + GKG++G Sbjct: 67 KPQAGHFKKAGVTPRRHVTEIRV-EDASAYEVGQDITAELFADVTFVDVTGTSKGKGYAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRH F G A+HG +HR G G PGRVFK +MAGRMG N+VT++NL++ V Sbjct: 126 AMKRHGFAGQGASHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGNNQVTLQNLKIARV 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D + L+L+KG +PG + V+ + K + Sbjct: 186 DAESNLVLIKGAIPG-INGGIVTVKTAVKGGAHA 218 >gi|291291685|gb|ADD91676.1| 50S ribosomal protein L3 [Enterococcus faecium] Length = 209 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 129/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQVKTMETDGYEAIQVGYQDMREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF+ + VG + F G ++DVTG T GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFK-NVELGEYEVGKEITVDVFQAGDIIDVTGTTKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVT++NLEVV Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPV-TPNRVFKNKRLAGRMGGNRVTIQNLEVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R +IL+KG VPGAKK S I ++ + K+ Sbjct: 178 RVDAERNVILIKGNVPGAKK-SLITIKSAVKA 208 >gi|152973956|ref|YP_001373473.1| 50S ribosomal protein L3 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189042831|sp|A7GK20|RL3_BACCN RecName: Full=50S ribosomal protein L3 gi|152022708|gb|ABS20478.1| ribosomal protein L3 [Bacillus cytotoxicus NVH 391-98] Length = 210 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 92/213 (43%), Positives = 133/213 (62%), Gaps = 4/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGELIPVTVIEATPNVVLQKKTTETDGYNAIQLGFEDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + + +PK+ + E R D D L VG F G+ VDVTG++ GKGF Sbjct: 61 ANKPEQGHVAKASTAPKRFIREIR-DADVDGLEVGQEVKVEVFAAGETVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH +HG S HR GS G P RVFK KK+AGRMGG+++T++NLE+V Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQITIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD +R L+L+KG VPGAKK S ++V+ + K++ Sbjct: 178 QVDVERNLLLIKGNVPGAKK-SLVVVQGAVKAS 209 >gi|312140918|ref|YP_004008254.1| 50S ribosomal protein l3 rplc [Rhodococcus equi 103S] gi|325675444|ref|ZP_08155128.1| 50S ribosomal protein L3 [Rhodococcus equi ATCC 33707] gi|311890257|emb|CBH49575.1| 50S ribosomal protein L3 RplC [Rhodococcus equi 103S] gi|325553415|gb|EGD23093.1| 50S ribosomal protein L3 [Rhodococcus equi ATCC 33707] Length = 217 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 88/214 (41%), Positives = 124/214 (57%), Gaps = 2/214 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ R +PVTV+ V RT +++GY AVQ+ G + V+ Sbjct: 6 KGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQIRTEERDGYSAVQLAFGAIDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V+P++ + E RV D VG + F G VDVTG + GKGF+G Sbjct: 66 KPTSGQFAKAGVTPRRHVVELRV-ADTSEYEVGQELTAEVFEDGAYVDVTGTSKGKGFAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G A+HG HR GS G PGRVFK +M+GRMG +R+T +NL V V Sbjct: 125 TMKRHGFAGQGASHGAQAVHRRPGSIGGCATPGRVFKGMRMSGRMGSDRITTQNLSVHKV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D + GL+L+KG +PG +K ++V+ + K + Sbjct: 185 DAENGLLLIKGAIPG-RKGGLVIVKTAVKGGASA 217 >gi|167749439|ref|ZP_02421566.1| hypothetical protein EUBSIR_00393 [Eubacterium siraeum DSM 15702] gi|167657611|gb|EDS01741.1| hypothetical protein EUBSIR_00393 [Eubacterium siraeum DSM 15702] gi|291532093|emb|CBK97678.1| LSU ribosomal protein L3P [Eubacterium siraeum 70/3] gi|291558166|emb|CBL35283.1| LSU ribosomal protein L3P [Eubacterium siraeum V10Sc8a] Length = 211 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 86/213 (40%), Positives = 125/213 (58%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT +++ G+ +PVTV+ C V +T + +GY AVQ+G G+ K+ Sbjct: 1 MTKGLIGKKIGMTQIFDEAGKVVPVTVIEAGPCVVTQLKTAENDGYEAVQLGFGDVSPKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KPM G F ++ K+ L EFR+ D + VG V F G ++DV+G++ GKGF Sbjct: 61 TNKPMTGHFKKNDLPFKRTLKEFRLD-DISNVNVGDVLKADVFAAGDVIDVSGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRHN L+ THG R GS G P R+FK K MAG MG VTV+NL +V Sbjct: 120 QGAIKRHNQHRLKETHGTGPVVRQAGSMGACSSPSRIFKGKGMAGHMGAENVTVQNLVIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +D + LI +KG +PG K + + D+ K A Sbjct: 180 KIDAENNLIAIKGAIPGP-KGGVVCITDAVKKA 211 >gi|120553652|ref|YP_958003.1| ribosomal protein L3 [Marinobacter aquaeolei VT8] gi|166233153|sp|A1TYJ7|RL3_MARAV RecName: Full=50S ribosomal protein L3 gi|120323501|gb|ABM17816.1| LSU ribosomal protein L3P [Marinobacter aquaeolei VT8] Length = 212 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 92/213 (43%), Positives = 132/213 (61%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG+ +PVTV+ ++ ++ +TL+ +GY AVQV G + Sbjct: 1 MAIGVVGRKAGMTRIFTDEGQALPVTVIEVEPNRITQLKTLESDGYRAVQVTVGSRRSSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + ++EFR+ + + L G + S F GQ+VD G + GKG Sbjct: 61 VNKAAAGHFAKAGVEAGRGVWEFRLADGEGEDLAAGGELTVSVFEDGQVVDAVGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG+MG +VTV+NL++ Sbjct: 121 FQGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQMGNAQVTVQNLKI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LV G VPGA + ++ + K+ Sbjct: 181 VRVDAERNLLLVSGAVPGATGGDVV-IKPAVKA 212 >gi|111023096|ref|YP_706068.1| 50S ribosomal protein L3 [Rhodococcus jostii RHA1] gi|226365595|ref|YP_002783378.1| 50S ribosomal protein L3 [Rhodococcus opacus B4] gi|123339772|sp|Q0S3H6|RL3_RHOSR RecName: Full=50S ribosomal protein L3 gi|254803687|sp|C1B012|RL3_RHOOB RecName: Full=50S ribosomal protein L3 gi|110822626|gb|ABG97910.1| 50S ribosomal protein L3 [Rhodococcus jostii RHA1] gi|226244085|dbj|BAH54433.1| 50S ribosomal protein L3 [Rhodococcus opacus B4] Length = 218 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 88/214 (41%), Positives = 123/214 (57%), Gaps = 2/214 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ R +PVTV+ V RT +++GY AVQ+ G + V+ Sbjct: 7 KGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQIRTEERDGYSAVQLAFGAIDPRKVN 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V+P++ + E RV D VG + F G VDVTG + GKGF+G Sbjct: 67 KPTSGQFAKAGVTPRRHVVELRV-ADTSEYEVGQELTAEVFEDGAYVDVTGTSKGKGFAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G A+HG HR GS G PGRVFK +M+GRMG +R+T +NL V V Sbjct: 126 TMKRHGFAGQGASHGAQAVHRRPGSIGGCATPGRVFKGMRMSGRMGSDRITTQNLSVHKV 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D + GL+L+KG +PG +K ++V+ + K Sbjct: 186 DAENGLLLIKGAIPG-RKGGLVIVKSAVKGGARA 218 >gi|284034002|ref|YP_003383933.1| 50S ribosomal protein L3 [Kribbella flavida DSM 17836] gi|283813295|gb|ADB35134.1| ribosomal protein L3 [Kribbella flavida DSM 17836] Length = 218 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 94/212 (44%), Positives = 128/212 (60%), Gaps = 2/212 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT ++ R +PVTV+ C V RT +GY VQ+ G+ + V+K Sbjct: 9 GLLGTKLGMTQTWDENNRVVPVTVIQAGPCVVTEVRTSASHGYDGVQIAFGDIDPRKVTK 68 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+RG F V+P++ L E R D +G F G++VDV+ + GKGF+G Sbjct: 69 PLRGHFEKAGVTPRRHLLELR-TADASEYTLGQEIKAEAFAAGEVVDVSATSKGKGFAGV 127 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GLRATHGV HRS GS G PGRVFK +MAGRMG +VT +N++V ++D Sbjct: 128 MKRHGFHGLRATHGVHKKHRSPGSIGGCATPGRVFKGLRMAGRMGNEQVTTQNVKVHAID 187 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +RGLIL+KG VPG K +L+R++ K A Sbjct: 188 AERGLILIKGAVPGP-KGGLVLIRNAAKGASK 218 >gi|170748636|ref|YP_001754896.1| 50S ribosomal protein L3 [Methylobacterium radiotolerans JCM 2831] gi|226730535|sp|B1LWS6|RL3_METRJ RecName: Full=50S ribosomal protein L3 gi|170655158|gb|ACB24213.1| ribosomal protein L3 [Methylobacterium radiotolerans JCM 2831] Length = 241 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 132/216 (61%), Positives = 159/216 (73%), Gaps = 2/216 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G +PVTVL +D CQVV HRT++KNGY+A+QVG G+AKVKN Sbjct: 1 MRSGVIAQKVGMTRVFTDAGEHVPVTVLKIDQCQVVAHRTVEKNGYVALQVGVGKAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS RG F+ V PKKKL EFRV +D L+PVG+ + +F GQ VDVTG T GKGF Sbjct: 61 VSAAERGRFAVAKVEPKKKLAEFRVTED-ALIPVGAEITADHFIPGQFVDVTGTTTGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G RVT +NL VV Sbjct: 120 AGGIKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D +RGLILV+G VPG WI +RD+ K + Sbjct: 180 RTDPERGLILVEGAVPGVA-GGWIQIRDAVKRKLPA 214 >gi|157148900|ref|YP_001456219.1| 50S ribosomal protein L3 [Citrobacter koseri ATCC BAA-895] gi|166233131|sp|A8AQM0|RL3_CITK8 RecName: Full=50S ribosomal protein L3 gi|157086105|gb|ABV15783.1| hypothetical protein CKO_04738 [Citrobacter koseri ATCC BAA-895] Length = 209 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 94/210 (44%), Positives = 132/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLAEGEE-YTVGQSISVELFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA ++V+ + K+ Sbjct: 181 DAERNLLLVKGGVPGA-TGCDLIVKPAVKA 209 >gi|167626806|ref|YP_001677306.1| 50S ribosomal protein L3 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241667387|ref|ZP_04754965.1| 50S ribosomal protein L3 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254875936|ref|ZP_05248646.1| 50S ribosomal protein L3 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|189042845|sp|B0U0Y9|RL3_FRAP2 RecName: Full=50S ribosomal protein L3 gi|167596807|gb|ABZ86805.1| 50S ribosomal protein L3 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254841957|gb|EET20371.1| 50S ribosomal protein L3 [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 210 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 99/212 (46%), Positives = 137/212 (64%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ +G IPVTV+ +++ +V +T + +GY A+QV G K N Sbjct: 1 MSLGLVGRKCGMTRIFTEDGVSIPVTVVQVESNKVTQIKTTETDGYNAIQVTTGFKKRSN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM G ++ +V P + L+EF + D VG+ + F GQ VDV G++ GKGF Sbjct: 61 VNKPMAGHYAKASVEPGRGLWEFAIDNASD-YEVGASIDATIFEAGQKVDVRGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRHNF ATHG S+SHR HGSTG Q PGRVFKNKKMAG +G VT+++LEVV Sbjct: 120 QGGVKRHNFATQDATHGNSLSHRVHGSTGQNQTPGRVFKNKKMAGHLGSENVTIQSLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + GL+L+KG +PG+ ++V + KS Sbjct: 180 RVDAENGLLLLKGGIPGSVGGD-VIVTPAVKS 210 >gi|312880372|ref|ZP_07740172.1| LSU ribosomal protein L3P [Aminomonas paucivorans DSM 12260] gi|310783663|gb|EFQ24061.1| LSU ribosomal protein L3P [Aminomonas paucivorans DSM 12260] Length = 209 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 99/209 (47%), Positives = 138/209 (66%), Gaps = 2/209 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V++ EG+ +PVTV+ C VV RT DKN Y AVQ+G G+ K + Sbjct: 1 MSMGILGRKVGMTQVFDAEGKAVPVTVIEAGPCPVVEVRTPDKNQYSAVQLGFGDVKPQR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+RG+++ +V+PK+ L EFRV++ G F G+ VDV G++ GKGF Sbjct: 61 LNKPVRGYYAKQDVAPKRWLREFRVEEGHGFDK-GQEVRADLFAEGETVDVIGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR +FGG A+HG S HR GS+G PG +FK K M GRMGG RVTVKNL V Sbjct: 120 AGVIKRFHFGGGPASHGASKFHRQPGSSGASSYPGHIFKGKTMPGRMGGERVTVKNLRVF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +VD + LIL++G VPGA K+ +L+R + Sbjct: 180 AVDVENNLILLRGAVPGA-KDGLVLIRKT 207 >gi|150015043|ref|YP_001307297.1| 50S ribosomal protein L3 [Clostridium beijerinckii NCIMB 8052] gi|189042837|sp|A6LPR1|RL3_CLOB8 RecName: Full=50S ribosomal protein L3 gi|149901508|gb|ABR32341.1| ribosomal protein L3 [Clostridium beijerinckii NCIMB 8052] Length = 209 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 86/212 (40%), Positives = 127/212 (59%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ RK+GMT +++ +G+ IPVTV+ C VV +TL+ +GY A+QVG E + K Sbjct: 1 MKKAIIGRKVGMTQIFDEKGKVIPVTVVEAGPCVVVQKKTLENDGYEAIQVGFDEIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G F+ + ++ L EFR+ D VG+ F G VDV+ ++ GKGF Sbjct: 61 ANKPRKGHFAKAGATLRRTLKEFRLD-DISQYEVGNEIKADVFGAGDKVDVSAVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G++KR N THG S HR+ GS G DP R FKNK+M G MG TV NLEVV Sbjct: 120 QGSIKRWNQQRGPMTHG-SKFHRAPGSMGASSDPSRTFKNKRMPGHMGSVNTTVLNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ LIL+KG +PG K + + ++D+ ++ Sbjct: 179 KVIAEKNLILIKGGIPGPNKGTVV-IKDTVRA 209 >gi|119478132|ref|ZP_01618211.1| 50S ribosomal protein L3 [marine gamma proteobacterium HTCC2143] gi|119448838|gb|EAW30081.1| 50S ribosomal protein L3 [marine gamma proteobacterium HTCC2143] Length = 214 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 103/211 (48%), Positives = 134/211 (63%), Gaps = 1/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT V+ +G IPVTV+ + +V +T + +GY A QV AG K Sbjct: 1 MTIGLVGRKSGMTRVFTDDGISIPVTVIEVSPNRVTSVKTGESDGYSAFQVTAGARKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK G F+ +V + L+EFR++ D+ VG+ + S F VGQ VDVTG + GKGF Sbjct: 61 VSKAEAGQFAKASVEAGRGLWEFRLEDGDEAPVVGAELTVSTFEVGQKVDVTGQSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF ATHG SISHRS+GS G Q PGRVFK KKM+G MG RVT++ LEVV Sbjct: 121 QGGIKRWNFQMQDATHGNSISHRSNGSIGQCQTPGRVFKGKKMSGHMGAERVTIQTLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD+ R L+L+KG +PGA ++VR + K Sbjct: 181 RVDEARNLLLIKGAIPGAPGGD-VIVRPATK 210 >gi|269837066|ref|YP_003319294.1| 50S ribosomal protein L3 [Sphaerobacter thermophilus DSM 20745] gi|269786329|gb|ACZ38472.1| ribosomal protein L3 [Sphaerobacter thermophilus DSM 20745] Length = 216 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 98/221 (44%), Positives = 131/221 (59%), Gaps = 5/221 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT ++N G+ IPVTVL + C V +T +++GY AVQ+G G K Sbjct: 1 MIHGLLGKKLGMTQIFNEAGQAIPVTVLEVGPCVVTQVKTRERDGYEAVQLGFGHKK--R 58 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P RG + P + L E + ++ VG V S F G+ VDVTG + G+GF Sbjct: 59 LNQPERGHLRASGAQP-RYLREVKADNIEE-YSVGQVIDCSVFKEGERVDVTGTSKGRGF 116 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRH FGG ATHG S R+ GS G PGRVFK +MAG MG RVTV+NLEVV Sbjct: 117 AGVMKRHGFGGGPATHGQSDRKRAPGSIGASATPGRVFKGLRMAGHMGNQRVTVQNLEVV 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 VD +R ++LV+G VPGA +LVR + K S Sbjct: 177 RVDPERNVVLVRGSVPGAN-GQLVLVRRAVKYRERAAAAAS 216 >gi|260362276|ref|ZP_05775243.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus K5030] gi|308111331|gb|EFO48871.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus K5030] Length = 200 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 89/190 (46%), Positives = 121/190 (63%), Gaps = 1/190 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+ EG IPVTV+ ++ +V +TL+ +GY A+QV AG K V+ Sbjct: 2 IGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF G Sbjct: 62 KAEAGHFAKAGVEAGRGLWEFRLENGEEF-EVGAELTVELFNETKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKRGLILVK 192 D +R L+L+K Sbjct: 181 DAERNLLLIK 190 >gi|74316423|ref|YP_314163.1| 50S ribosomal protein L3P [Thiobacillus denitrificans ATCC 25259] gi|109893570|sp|Q3SLP9|RL3_THIDA RecName: Full=50S ribosomal protein L3 gi|74055918|gb|AAZ96358.1| ribosomal protein L3 [Thiobacillus denitrificans ATCC 25259] Length = 214 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 99/215 (46%), Positives = 128/215 (59%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ G +PVTVL + N +V RT + +GY AVQV G + Sbjct: 1 MSIGLVGRKVGMTRIFTENGASVPVTVLEMSNNRVTQVRTPENDGYSAVQVAYGSRRNSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G ++ V + L EFRV D G+ S F GQ VDVTG+T GKG Sbjct: 61 VNKSEAGHYAKAGVDAGELLREFRVAADVAAQYQPGAAVSVEVFQAGQKVDVTGVTQGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRHNF RA+HG S SH GS G QDPGRVF K+M+G MG T +NLEV Sbjct: 121 FAGTIKRHNFKSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMSGHMGAVSCTKQNLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 V VD +RGL+L+KG VPG+ K ++VR + K Sbjct: 181 VRVDAERGLVLLKGAVPGS-KGGHVVVRPAVKGGA 214 >gi|331268413|ref|YP_004394905.1| 50S ribosomal protein L3 [Clostridium botulinum BKT015925] gi|329124963|gb|AEB74908.1| ribosomal protein L3 [Clostridium botulinum BKT015925] Length = 209 Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 87/212 (41%), Positives = 130/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ RK+GMT +++ G+ IPVTV+ C V+ +T +K+GY A+QVG + + K Sbjct: 1 MKKAIIGRKIGMTQIFDENGKVIPVTVVEAGPCAVLQKKTEEKDGYNAIQVGFEDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G F+ VS K+ + EFR++ D+ VG+ F G VDVTG++ GKGF Sbjct: 61 ANKPKKGHFAKAGVSLKRIVREFRLENIDE-YEVGNEIKADVFEAGDKVDVTGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF HG S HR+ GS G DP R FKNKKM G MG + TV NLEVV Sbjct: 120 QGTIKRWNFHRGPMAHG-SKYHRAVGSMGAASDPSRTFKNKKMPGHMGHKKSTVLNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V + ++L+KG +PG K +++++++ K+ Sbjct: 179 KVMADKNVVLIKGGIPGPNKG-YVVIKNTVKA 209 >gi|227550720|ref|ZP_03980769.1| 50S ribosomal protein L3 [Enterococcus faecium TX1330] gi|257878725|ref|ZP_05658378.1| ribosomal protein L3 [Enterococcus faecium 1,230,933] gi|257881366|ref|ZP_05661019.1| ribosomal protein L3 [Enterococcus faecium 1,231,502] gi|257885634|ref|ZP_05665287.1| ribosomal protein L3 [Enterococcus faecium 1,231,501] gi|257888021|ref|ZP_05667674.1| ribosomal protein L3 [Enterococcus faecium 1,141,733] gi|257890584|ref|ZP_05670237.1| ribosomal protein L3 [Enterococcus faecium 1,231,410] gi|257893174|ref|ZP_05672827.1| ribosomal protein L3 [Enterococcus faecium 1,231,408] gi|257896360|ref|ZP_05676013.1| ribosomal protein L3 [Enterococcus faecium Com12] gi|257899334|ref|ZP_05678987.1| ribosomal protein L3 [Enterococcus faecium Com15] gi|258615211|ref|ZP_05712981.1| 50S ribosomal protein L3 [Enterococcus faecium DO] gi|260558287|ref|ZP_05830483.1| ribosomal protein L3 [Enterococcus faecium C68] gi|261206993|ref|ZP_05921682.1| ribosomal protein L3 [Enterococcus faecium TC 6] gi|289565372|ref|ZP_06445822.1| 50S ribosomal protein L3 [Enterococcus faecium D344SRF] gi|293379446|ref|ZP_06625590.1| 50S ribosomal protein L3 [Enterococcus faecium PC4.1] gi|293562946|ref|ZP_06677413.1| ribosomal protein L3 [Enterococcus faecium E1162] gi|293567931|ref|ZP_06679272.1| ribosomal protein L3 [Enterococcus faecium E1071] gi|293570684|ref|ZP_06681734.1| ribosomal protein L3 [Enterococcus faecium E980] gi|294615393|ref|ZP_06695266.1| ribosomal protein L3 [Enterococcus faecium E1636] gi|294618320|ref|ZP_06697901.1| ribosomal protein L3 [Enterococcus faecium E1679] gi|294621078|ref|ZP_06700269.1| ribosomal protein L3 [Enterococcus faecium U0317] gi|314937608|ref|ZP_07844934.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133a04] gi|314942893|ref|ZP_07849706.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133C] gi|314947971|ref|ZP_07851375.1| 50S ribosomal protein L3 [Enterococcus faecium TX0082] gi|314950888|ref|ZP_07853957.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133A] gi|314991464|ref|ZP_07856941.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133B] gi|314995015|ref|ZP_07860135.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133a01] gi|227180181|gb|EEI61153.1| 50S ribosomal protein L3 [Enterococcus faecium TX1330] gi|257812953|gb|EEV41711.1| ribosomal protein L3 [Enterococcus faecium 1,230,933] gi|257817024|gb|EEV44352.1| ribosomal protein L3 [Enterococcus faecium 1,231,502] gi|257821490|gb|EEV48620.1| ribosomal protein L3 [Enterococcus faecium 1,231,501] gi|257824075|gb|EEV51007.1| ribosomal protein L3 [Enterococcus faecium 1,141,733] gi|257826944|gb|EEV53570.1| ribosomal protein L3 [Enterococcus faecium 1,231,410] gi|257829553|gb|EEV56160.1| ribosomal protein L3 [Enterococcus faecium 1,231,408] gi|257832925|gb|EEV59346.1| ribosomal protein L3 [Enterococcus faecium Com12] gi|257837246|gb|EEV62320.1| ribosomal protein L3 [Enterococcus faecium Com15] gi|260075461|gb|EEW63767.1| ribosomal protein L3 [Enterococcus faecium C68] gi|260078621|gb|EEW66323.1| ribosomal protein L3 [Enterococcus faecium TC 6] gi|289162862|gb|EFD10712.1| 50S ribosomal protein L3 [Enterococcus faecium D344SRF] gi|291589516|gb|EFF21323.1| ribosomal protein L3 [Enterococcus faecium E1071] gi|291591767|gb|EFF23403.1| ribosomal protein L3 [Enterococcus faecium E1636] gi|291595414|gb|EFF26726.1| ribosomal protein L3 [Enterococcus faecium E1679] gi|291599314|gb|EFF30340.1| ribosomal protein L3 [Enterococcus faecium U0317] gi|291605072|gb|EFF34539.1| ribosomal protein L3 [Enterococcus faecium E1162] gi|291609156|gb|EFF38428.1| ribosomal protein L3 [Enterococcus faecium E980] gi|292641969|gb|EFF60135.1| 50S ribosomal protein L3 [Enterococcus faecium PC4.1] gi|313590741|gb|EFR69586.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133a01] gi|313593944|gb|EFR72789.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133B] gi|313596897|gb|EFR75742.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133A] gi|313598365|gb|EFR77210.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133C] gi|313642985|gb|EFS07565.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133a04] gi|313645569|gb|EFS10149.1| 50S ribosomal protein L3 [Enterococcus faecium TX0082] Length = 209 Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 129/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQVKTMETDGYEAIQVGYQDMREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF+ + VG + F G ++DVTG T GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFK-NVELGEYEVGKEITVDVFQAGDIIDVTGTTKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVT++NLEVV Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTIQNLEVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R +IL+KG VPGAKK S I ++ + K+ Sbjct: 178 RVDAERNVILIKGNVPGAKK-SLITIKSAVKA 208 >gi|313836021|gb|EFS73735.1| 50S ribosomal protein L3 [Propionibacterium acnes HL037PA2] gi|314929560|gb|EFS93391.1| 50S ribosomal protein L3 [Propionibacterium acnes HL044PA1] gi|314970555|gb|EFT14653.1| 50S ribosomal protein L3 [Propionibacterium acnes HL037PA3] gi|328906230|gb|EGG26005.1| 50S ribosomal protein L3 [Propionibacterium sp. P08] Length = 223 Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 101/213 (47%), Positives = 132/213 (61%), Gaps = 2/213 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGMT +++ + +PVTV+ C V RT + +GY AVQ+G G K KNV+ Sbjct: 8 KGVLGTKLGMTQLWDEHNKLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKNVT 67 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P++ L E R D +G + F+ VDVTG + GKG +G Sbjct: 68 KPEAGHFEKAGVTPRRHLVELR-TADASEYTLGQEITAGVFSESDFVDVTGTSKGKGTAG 126 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGGLRATHGV HRS GS G PG+V K +MAGRMG +RVTV+NL+V SV Sbjct: 127 VMKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGTDRVTVQNLQVHSV 186 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D +RG++LV+G VPG K S ++VR + K A Sbjct: 187 DAERGIMLVRGAVPGP-KGSLLVVRSAAKKAAK 218 >gi|255020765|ref|ZP_05292823.1| LSU ribosomal protein L3p (L3e) [Acidithiobacillus caldus ATCC 51756] gi|254969761|gb|EET27265.1| LSU ribosomal protein L3p (L3e) [Acidithiobacillus caldus ATCC 51756] Length = 210 Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 95/212 (44%), Positives = 137/212 (64%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT + + +GR +PVTV+ +D + +T +++GY AVQV GE + + Sbjct: 1 MAIGLVGRKIGMTRIRSEDGRVVPVTVIQVDTNTITQIKTQERDGYTAVQVSTGERRPQR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ + G + P + L EFR + +G F GQ VDVTG++ GKGF Sbjct: 61 VTSALAGHYRRAGAQPGRVLREFR-DPGLEDPQLGQEIGLDIFNTGQRVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GA+KRHNF RA+HG S+SHR+ GS GCRQ PGRVFK KKMAG++G +VT NLE+V Sbjct: 120 AGAIKRHNFRSNRASHGNSLSHRAPGSIGCRQTPGRVFKGKKMAGQLGNEQVTTLNLELV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D +R L++VKG VPGA + ++VR + ++ Sbjct: 180 RIDAERRLLMVKGAVPGANQGD-VIVRPAVRA 210 >gi|315640161|ref|ZP_07895283.1| 50S ribosomal protein L3 [Enterococcus italicus DSM 15952] gi|315484138|gb|EFU74612.1| 50S ribosomal protein L3 [Enterococcus italicus DSM 15952] Length = 209 Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 94/212 (44%), Positives = 130/212 (61%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQLKTVENDGYEAVQVGYQDLREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF+ + + L VGS F G +VDVTG T GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFK-DVELEGLEVGSEIKVDAFQAGDIVDVTGTTKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+V Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R +IL+KG VPGAKK S I ++ + K+ Sbjct: 178 RVDAERNVILIKGNVPGAKK-SLITIKSAVKA 208 >gi|189424410|ref|YP_001951587.1| 50S ribosomal protein L3 [Geobacter lovleyi SZ] gi|226725181|sp|B3E7T5|RL3_GEOLS RecName: Full=50S ribosomal protein L3 gi|189420669|gb|ACD95067.1| ribosomal protein L3 [Geobacter lovleyi SZ] Length = 211 Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 131/212 (61%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT ++ +G R+PVTV+ C V+ +T + +GY AVQVG Sbjct: 1 MNKGIIGKKLGMTQIFLEDGTRVPVTVVQAGPCVVLQKKTAEVDGYSAVQVGFETVNAAK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + RG + L E +++++ + L +G + F G L+DVTG +IGKGF Sbjct: 61 ANSADRGHCVKAGKGVFRHLRELKLEQEAE-LNIGDELTVQQFEPGDLIDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRHNF G RA+HG S HR+ GS GC P RVFKNKKM G+MG RVTV+ L+VV Sbjct: 120 QGVIKRHNFKGGRASHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQMGNERVTVQRLQVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + LIL+KG +P + KN+ ++++DS K+ Sbjct: 179 RVDADQNLILIKGAIPDS-KNNVVVIKDSVKA 209 >gi|91791539|ref|YP_561190.1| 50S ribosomal protein L3 [Shewanella denitrificans OS217] gi|123061370|sp|Q12SV9|RL3_SHEDO RecName: Full=50S ribosomal protein L3 gi|91713541|gb|ABE53467.1| LSU ribosomal protein L3P [Shewanella denitrificans OS217] Length = 212 Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 90/213 (42%), Positives = 128/213 (60%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G IPVTV+ + +V +TL+ +GY A+QV G K Sbjct: 1 MAIGLIGRKVGMTRIFTEDGVSIPVTVIEVAGNRVTQVKTLETDGYRALQVTTGTKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++K G F+ V + L+E R+ + + + VG+ + F VDVTG + GKG Sbjct: 61 ITKAEAGHFAKGGVEAGRGLWEMRLADGEGEGIEVGAELNVDIFAETVKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF THG S++HRS+GS G Q PGRVFK KKM+G MG +VT +NL V Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAEQVTTQNLHV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R LILV+G VPGA I ++ + K+ Sbjct: 181 VRVDSERNLILVRGAVPGATNGDLI-IKPAVKA 212 >gi|94312248|ref|YP_585458.1| 50S ribosomal protein L3 [Cupriavidus metallidurans CH34] gi|122987810|sp|Q1LI37|RL3_RALME RecName: Full=50S ribosomal protein L3 gi|93356100|gb|ABF10189.1| 50S ribosomal subunit protein L3 [Cupriavidus metallidurans CH34] Length = 214 Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 90/215 (41%), Positives = 129/215 (60%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTV+ + + +V +T + +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTDDGDSIPVTVVEVGDNRVTQIKTDETDGYTAVQVTFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + + EFR+ L GS S F VGQ +DV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEVIKEFRIDAAKAAELQAGSSLSVDLFQVGQKIDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KRH+F RATHG S SH GS G QDPGRVF K+M G +G TV+NLE+ Sbjct: 121 YAGTIKRHHFASGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDATRTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 +D +R L+LVKG +PG+ K ++V + K+ Sbjct: 181 AKIDAERKLLLVKGAIPGS-KGGKVIVTPAVKAKA 214 >gi|293115547|ref|ZP_05792032.2| 50S ribosomal protein L3 [Butyrivibrio crossotus DSM 2876] gi|292809408|gb|EFF68613.1| 50S ribosomal protein L3 [Butyrivibrio crossotus DSM 2876] Length = 240 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 90/229 (39%), Positives = 121/229 (52%), Gaps = 19/229 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58 M+ ++A K+GMT ++N +G +PVTVL C V +T++ +GY AVQVG + K Sbjct: 14 MKKAILATKIGMTQIFNEDGVLVPVTVLQAGPCVVTQVKTVENDGYAAVQVGFVDKKEKI 73 Query: 59 --------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V+K +G F VS K+ + EFR + D V F Sbjct: 74 VNVDKNGSKEIRNRHGVTKAEKGHFDKAGVSYKRYVREFRFENAAD-YTVADEIKADIFA 132 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G +D T + GKGF GA+KRH HG S HR GS G DP RVFK K M Sbjct: 133 AGDKLDATAIAKGKGFQGAIKRHGQHRGPMAHG-SKFHRHQGSNGSSSDPSRVFKGKGMP 191 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 G MG ++TV+NLE+V VD + LILVKG VPG KK S + ++++ KS Sbjct: 192 GHMGAKKITVQNLEIVKVDVENNLILVKGAVPGPKK-SLVTLKETVKSG 239 >gi|296333113|ref|ZP_06875567.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305672815|ref|YP_003864486.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. spizizenii str. W23] gi|296149729|gb|EFG90624.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411058|gb|ADM36176.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. spizizenii str. W23] Length = 209 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 129/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ ++ + +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKSTENDGYEAIQLGFDDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +PK+ + E R + D VG F+ G++VDVTG++ GKGF Sbjct: 61 SNKPEKGHVAKAETAPKRFVKELRGVEMDA-YEVGQEVKVEIFSAGEIVDVTGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH +HG S HR GS G DP RVFK K + GRMGG ++TV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPV-DPNRVFKGKLLPGRMGGEQITVQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGAKK S I V+ + KS Sbjct: 178 KVDAERNLLLIKGNVPGAKK-SLITVKSAVKS 208 >gi|219849887|ref|YP_002464320.1| 50S ribosomal protein L3 [Chloroflexus aggregans DSM 9485] gi|254803662|sp|B8G6S5|RL3_CHLAD RecName: Full=50S ribosomal protein L3 gi|219544146|gb|ACL25884.1| ribosomal protein L3 [Chloroflexus aggregans DSM 9485] Length = 210 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 128/212 (60%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GM + EGR IPVTV+ C V RT +++GY AVQ+G E + + Sbjct: 1 MIHGLLGRKIGMMQYFTKEGRAIPVTVIAAGPCIVTQIRTPERDGYSAVQLGYEEVEARK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + + L EF P G V + F GQ VD++G + G+GF Sbjct: 61 LTKPQQGHLKASGGKMLRYLREFSADDPLAHKP-GEVVTVELFKPGQKVDISGTSKGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH F G THG S HR+ GS G PGRV+K ++MAGRMGG+RVT++NLEVV Sbjct: 120 AGVVKRHGFRGGPKTHGQSDRHRAPGSIGAGTTPGRVWKGQRMAGRMGGDRVTIQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ L+LVKG VPGA +N + +R + K Sbjct: 180 EVLPEQNLLLVKGSVPGA-RNGLLQIRKAVKG 210 >gi|283788044|ref|YP_003367909.1| 50S ribosomal subunit protein L3 [Citrobacter rodentium ICC168] gi|282951498|emb|CBG91197.1| 50S ribosomal subunit protein L3 [Citrobacter rodentium ICC168] Length = 209 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 94/210 (44%), Positives = 132/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L GY A+QV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANEGYRAIQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|118486756|gb|ABK95213.1| unknown [Populus trichocarpa] Length = 315 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 108/209 (51%), Positives = 143/209 (68%), Gaps = 2/209 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GVVA K GMT +++ G RIP+TVL +D+ V +T++K G+ A+QVG G+ K K++ Sbjct: 69 RTGVVAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTVEKEGFFALQVGCGQKKEKHL 128 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F + V K+KL EF V +D LLPVG+ +F GQ VDV G+T+GKGF Sbjct: 129 TKPEVGHFRAQGVPMKRKLREFPVTED-ALLPVGTYVGVRHFVPGQFVDVAGITMGKGFQ 187 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F G A+HG S+SHRS GSTG R PG+VFK KKM GRMGG + TVKN+ V Sbjct: 188 GGMKRHGFKGGPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGVQRTVKNVWVYK 247 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 +D R L+ VKG VPGA+ N ++ ++DS Sbjct: 248 IDPARNLMWVKGQVPGAEGN-FVFIKDSV 275 >gi|312795774|ref|YP_004028696.1| LSU ribosomal protein L3P [Burkholderia rhizoxinica HKI 454] gi|312167549|emb|CBW74552.1| LSU ribosomal protein L3P [Burkholderia rhizoxinica HKI 454] Length = 247 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 97/216 (44%), Positives = 132/216 (61%), Gaps = 2/216 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTVL + + +V +T++ +GY AVQV GE + Sbjct: 30 MSLGLVGRKVGMTRIFTADGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGERRASR 89 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR++ D L GSV F VGQ VDV G++IGKG Sbjct: 90 VTKPLAGHLAKAGVQAGEILKEFRIEADKAAELSPGSVVGVDLFEVGQKVDVQGVSIGKG 149 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G +G T +NLE+ Sbjct: 150 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTATTQNLEI 209 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +D +R LILVKG VPGA K + V + K+ Sbjct: 210 ARIDAQRKLILVKGAVPGA-KGGKVFVTPAVKARAK 244 >gi|300933010|ref|ZP_07148266.1| 50S ribosomal protein L3 [Corynebacterium resistens DSM 45100] Length = 218 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 90/214 (42%), Positives = 128/214 (59%), Gaps = 2/214 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +KLGMT +++ E R +PVTV+ C V RT + +GY AVQ+ GE + V+ Sbjct: 7 KGILGKKLGMTQIFDDENRVVPVTVVEAGPCVVTQVRTKETDGYEAVQIAFGEIDPRKVN 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P++ + E RV +D VG + F + VDVTG+T G G++G Sbjct: 67 KPAAGHFKKAGVTPRRHVTEIRV-EDASAYEVGQDVTVEIFNDVKFVDVTGITKGHGYAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRH F G A+HG +HR G G PGR+FK K+MAGRMG +RVT++NL+V V Sbjct: 126 AMKRHGFAGQGASHGNQAAHRRVGGIGACATPGRIFKGKRMAGRMGSDRVTLQNLKVAKV 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D + L+LVKG VPG ++V+ + K + Sbjct: 186 DAESNLLLVKGAVPG-NNGGIVVVKTAVKGGAHA 218 >gi|194017514|ref|ZP_03056125.1| ribosomal protein L3 [Bacillus pumilus ATCC 7061] gi|194010786|gb|EDW20357.1| ribosomal protein L3 [Bacillus pumilus ATCC 7061] Length = 209 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 93/212 (43%), Positives = 126/212 (59%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T D +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVVEAAANVVLQKKTADTDGYEAIQIGFDDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +PK+ + E R + D VG F G +VDVTG + GKGF Sbjct: 61 SNKPEKGHVAKAETAPKRFVKELRG-AELDAYEVGQEVKVDIFANGDIVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH THG S HR GS G DP RVFK K + GRMGG ++TV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMTHG-SRYHRRPGSMGPV-DPNRVFKGKLLPGRMGGEQITVQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGAKK S + V+ + KS Sbjct: 178 KVDAERNLLLIKGNVPGAKK-SLVTVKSAVKS 208 >gi|82701900|ref|YP_411466.1| ribosomal protein L3 [Nitrosospira multiformis ATCC 25196] gi|109893529|sp|Q2YAZ7|RL3_NITMU RecName: Full=50S ribosomal protein L3 gi|82409965|gb|ABB74074.1| LSU ribosomal protein L3P [Nitrosospira multiformis ATCC 25196] Length = 236 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 96/219 (43%), Positives = 132/219 (60%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG PVTVL + N +V +T +GY AVQV G+ + Sbjct: 1 MSLGLVGRKVGMTRIFTEEGDSQPVTVLDVSNNRVTQIKTPATDGYSAVQVTFGKRRAIR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP G F+ V + L EFRV ++ L G+V F GQ VDVTG +IGKG Sbjct: 61 VNKPSAGHFAKAAVEAGEILREFRVAEEILGTLSPGTVIGLDIFQPGQRVDVTGTSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++GA+KRH F RA+HG S SH GS G QDPGRVF K+M G +G R T++NLE+ Sbjct: 121 YAGAIKRHGFASNRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGNVRRTIQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 + +D +RGL+++KG +PG+ K + V S +SA Sbjct: 181 LRIDAERGLLIIKGAIPGS-KGGDVTVSPSIRSARPTNN 218 >gi|331005012|ref|ZP_08328419.1| LSU ribosomal protein L3p (L3e) [gamma proteobacterium IMCC1989] gi|330421178|gb|EGG95437.1| LSU ribosomal protein L3p (L3e) [gamma proteobacterium IMCC1989] Length = 212 Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 99/211 (46%), Positives = 130/211 (61%), Gaps = 2/211 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ +G IPVTV+ +D ++ ++ + +GY AVQV G K Sbjct: 1 MTIGLVGRKSGMTRIFAEDGASIPVTVIEVDPNRITQIKSTEVDGYNAVQVTVGSRKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK G FS N + ++E R + VG + + F VGQ VDVTG + GKGF Sbjct: 61 VSKSAAGHFSKANTEAGRGVWELRNDA-KEAFEVGGEITVAAFEVGQKVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF ATHG S+SHR+ GS G Q PGRVFKNKKMAG MG +VTV+ LEVV Sbjct: 120 AGGVKRWNFAMQDATHGNSLSHRAPGSIGQCQTPGRVFKNKKMAGHMGAEQVTVQTLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L+L+KG VPGA ++VR + K Sbjct: 180 RVDSERNLLLIKGAVPGAPGGD-VIVRPATK 209 >gi|288942072|ref|YP_003444312.1| 50S ribosomal protein L3 [Allochromatium vinosum DSM 180] gi|288897444|gb|ADC63280.1| 50S ribosomal protein L3 [Allochromatium vinosum DSM 180] Length = 216 Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 92/212 (43%), Positives = 128/212 (60%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GV+ RK GMT V+ G IPVTV+ + +V ++ + +GY A+QV G+ + Sbjct: 1 MSIGVIGRKAGMTRVFTEAGESIPVTVIEVTPNRVSQVKSEETDGYRAIQVAFGQRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KPM G ++ V + L EFR++ + L VG S S F GQ VDV G+T G+G Sbjct: 61 VTKPMAGHYAKAGVEAGEVLREFRLEGGEGADLQVGQEISVSIFEPGQKVDVRGVTKGRG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG ++RH+F G THG S+SHR+ GS G Q PGRV+K KKMAG +G +NLEV Sbjct: 121 FSGVIRRHHFAGQDRTHGNSLSHRAPGSIGQNQTPGRVWKGKKMAGHLGAANRCQQNLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V +D +R L+LV+G VPG +++ S K Sbjct: 181 VRIDAERNLLLVRGGVPGPTGGRLVVL-PSVK 211 >gi|188535279|ref|YP_001909076.1| 50S ribosomal protein L3 [Erwinia tasmaniensis Et1/99] gi|226725174|sp|B2VK65|RL3_ERWT9 RecName: Full=50S ribosomal protein L3 gi|188030321|emb|CAO98210.1| 50S ribosomal protein L3 [Erwinia tasmaniensis Et1/99] Length = 209 Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 93/210 (44%), Positives = 132/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L+ +GY A+QV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKGLENDGYTAIQVTTGAKKASRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR + + VG + F + VDVTG + GKGF+G Sbjct: 62 KPAAGHFAKAGVEAGRGLWEFRTAEGAEFT-VGQSINVDIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|154684634|ref|YP_001419795.1| 50S ribosomal protein L3 [Bacillus amyloliquefaciens FZB42] gi|166233116|sp|A7Z0N8|RL3_BACA2 RecName: Full=50S ribosomal protein L3 gi|154350485|gb|ABS72564.1| RplC [Bacillus amyloliquefaciens FZB42] Length = 209 Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 90/212 (42%), Positives = 130/212 (61%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQLGFDDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +PK+ + E R D D +G F+ G++VDVTG++ GKGF Sbjct: 61 SNKPEKGHVAKAETAPKRFVKELRGV-DMDAYEIGQEVKVEIFSAGEIVDVTGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH +HG S HR GS G DP RVFK K + GRMGG+++TV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPV-DPNRVFKGKLLPGRMGGDQITVQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA+K + I V+ + KS Sbjct: 178 KVDAERNLLLIKGNVPGARK-TLITVKSAVKS 208 >gi|326803033|ref|YP_004320851.1| 50S ribosomal protein L3 [Aerococcus urinae ACS-120-V-Col10a] gi|326651005|gb|AEA01188.1| 50S ribosomal protein L3 [Aerococcus urinae ACS-120-V-Col10a] Length = 211 Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 85/213 (39%), Positives = 124/213 (58%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT + G +PVTV+ V+ +TL+ +GY AVQ+G + + Sbjct: 1 MTKGILGKKVGMTQFFTESGELVPVTVIEAQANVVLQVKTLENDGYEAVQLGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +PK+ + EF+ + VGS F G +VDVTG + GKGF Sbjct: 61 ANKPEQGHVAKAETTPKRFIREFK-DVELGEYEVGSEVKVDIFQEGDIVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH +HG HR+ GS G D +VFK K + G+MGGN VT++NLE+V Sbjct: 120 QGAIKRHGQQRGPMSHGSH-YHRAAGSMGMASDASKVFKGKNLPGQMGGNTVTIQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V + +ILVKG VPGAKK S + ++ + KSA Sbjct: 179 KVMADKNVILVKGNVPGAKK-SLVEIKTAAKSA 210 >gi|323483301|ref|ZP_08088691.1| 50S ribosomal protein L3 [Clostridium symbiosum WAL-14163] gi|323691201|ref|ZP_08105477.1| 50S ribosomal protein L3 [Clostridium symbiosum WAL-14673] gi|323403399|gb|EGA95707.1| 50S ribosomal protein L3 [Clostridium symbiosum WAL-14163] gi|323504720|gb|EGB20506.1| 50S ribosomal protein L3 [Clostridium symbiosum WAL-14673] Length = 211 Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 90/213 (42%), Positives = 125/213 (58%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G PVTVL C V +T++ +GY AVQVG + + K Sbjct: 1 MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTVENDGYKAVQVGFVDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F V+ K+ + EFR + ++ V F G +DVT ++ GKGF Sbjct: 61 VTKPVKGHFDKAGVAYKRFVREFRFENAEE-YSVKDEIKAEIFAAGDKIDVTAVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR+ HG S HR GS G PGRVFK K M G MG +VT++NLEVV Sbjct: 120 QGAIKRYGQHRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGHMGSVKVTIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD LILVKG VPG KK S + V+++ K+ Sbjct: 179 RVDADSNLILVKGAVPGPKK-SLVTVKETVKAG 210 >gi|225571552|ref|ZP_03780548.1| hypothetical protein CLOHYLEM_07650 [Clostridium hylemonae DSM 15053] gi|225159629|gb|EEG72248.1| hypothetical protein CLOHYLEM_07650 [Clostridium hylemonae DSM 15053] Length = 226 Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 88/228 (38%), Positives = 125/228 (54%), Gaps = 19/228 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G PVTVL C V +T + +GY AVQVG + K K Sbjct: 1 MKKAILATKVGMTQIFNEDGTLTPVTVLQAGPCVVTQVKTAENDGYDAVQVGFVDKKEKT 60 Query: 61 VSK----------------PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V+K +G F+ VS K+ + EF+ + + + F Sbjct: 61 VNKDKSGKKEIVHRHGVTKAEQGHFAKAGVSGKRFVREFKFENASE-YELAQEIKADIFE 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G +D T ++ GKGF GA+KRHN THG S HR GS G DP +VFK KKM Sbjct: 120 AGDKIDATAVSKGKGFQGAIKRHNQHRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G MG ++T++NLEVV VD + L+LVKG VPG KK S + ++++ K+ Sbjct: 179 GHMGSKKITIQNLEVVRVDAENNLLLVKGSVPGPKK-SLVTIKEAVKA 225 >gi|157690900|ref|YP_001485362.1| 50S ribosomal protein L3 [Bacillus pumilus SAFR-032] gi|166989380|sp|A8F985|RL3_BACP2 RecName: Full=50S ribosomal protein L3 gi|157679658|gb|ABV60802.1| ribosomal protein L3 [Bacillus pumilus SAFR-032] Length = 209 Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 93/212 (43%), Positives = 126/212 (59%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T D +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVVEAAANVVLQKKTTDTDGYEAIQIGFDDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +PK+ + E R + D VG F G +VDVTG + GKGF Sbjct: 61 SNKPEKGHVAKAETAPKRFVKELRG-AELDAYEVGQEVKVDIFANGDIVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH THG S HR GS G DP RVFK K + GRMGG ++TV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMTHG-SRYHRRPGSMGPV-DPNRVFKGKLLPGRMGGEQITVQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGAKK S + V+ + KS Sbjct: 178 KVDAERNLLLIKGNVPGAKK-SLVTVKSAVKS 208 >gi|238763730|ref|ZP_04624689.1| 50S ribosomal protein L3 [Yersinia kristensenii ATCC 33638] gi|238698032|gb|EEP90790.1| 50S ribosomal protein L3 [Yersinia kristensenii ATCC 33638] Length = 209 Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 93/210 (44%), Positives = 130/210 (61%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V ++L+ +GY AVQV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYRAVQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+ FR+ + + G S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWGFRLPEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG +G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA + I V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGATGGNLI-VKPAVKA 209 >gi|209548935|ref|YP_002280852.1| 50S ribosomal protein L3 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|226730555|sp|B5ZYT5|RL3_RHILW RecName: Full=50S ribosomal protein L3 gi|209534691|gb|ACI54626.1| ribosomal protein L3 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 213 Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 146/215 (67%), Positives = 171/215 (79%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G +PVTVL +D CQVV RT++KNGY AVQ+GAG+AKVKN Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMDGCQVVATRTVEKNGYTAVQLGAGQAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ NV PK K+ EFRV +D LL +G+ +F GQLVDVTG TIGKGF Sbjct: 61 TSKAMRGNFAVANVEPKAKVAEFRVSEDQ-LLEIGTEIKAGHFAAGQLVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 S D+ RGLIL+KG VPG+ K +WI+VRD+ KSA Sbjct: 180 STDEDRGLILIKGAVPGS-KGAWIIVRDAVKSAAK 213 >gi|182436627|ref|YP_001824346.1| 50S ribosomal protein L3 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326777249|ref|ZP_08236514.1| 50S ribosomal protein L3 [Streptomyces cf. griseus XylebKG-1] gi|226730571|sp|B1W407|RL3_STRGG RecName: Full=50S ribosomal protein L3 gi|178465143|dbj|BAG19663.1| putative 50S ribosomal protein L3 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326657582|gb|EGE42428.1| 50S ribosomal protein L3 [Streptomyces cf. griseus XylebKG-1] Length = 214 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 98/211 (46%), Positives = 128/211 (60%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGMT V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+ Sbjct: 6 KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 66 KPLKGHFAKADVTPRRHLVELR-TPDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL + +V Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+L+KG VPG +LVR + K A Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214 >gi|313903151|ref|ZP_07836545.1| LSU ribosomal protein L3P [Thermaerobacter subterraneus DSM 13965] gi|313466653|gb|EFR62173.1| LSU ribosomal protein L3P [Thermaerobacter subterraneus DSM 13965] Length = 217 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 98/210 (46%), Positives = 134/210 (63%), Gaps = 3/210 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RKLGMT +++ EGR +PVTV+ C VV RT +++GY AVQ+G GE K + Sbjct: 1 MGVGLLGRKLGMTQIFDDEGRAVPVTVIQAGPCVVVQTRTQERDGYRAVQLGFGEIKPRK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP-VGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KPM G F+ V+P + L EFR++ + + +P VG + F G+ VDVTG + GKG Sbjct: 61 VNKPMAGHFARAGVNPVRVLREFRLEGEGEPMPEVGQQLTVELFKAGEYVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G + RH FG +HG S HR GS PGRVFK ++MAGR G RVTV+ L+V Sbjct: 121 FLGPVARHGFGRGPMSHG-SKYHRGPGSLAPSTFPGRVFKGRRMAGRTGNRRVTVRGLQV 179 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 V VD +R L+LVKG VPG + S + +R + Sbjct: 180 VRVDPERNLLLVKGAVPGP-RGSVVAIRKT 208 >gi|259909999|ref|YP_002650355.1| 50S ribosomal protein L3 [Erwinia pyrifoliae Ep1/96] gi|292489849|ref|YP_003532739.1| 50S ribosomal protein L3 [Erwinia amylovora CFBP1430] gi|292900891|ref|YP_003540260.1| 50S ribosomal protein L3 [Erwinia amylovora ATCC 49946] gi|224965621|emb|CAX57153.1| 50S ribosomal protein L3 [Erwinia pyrifoliae Ep1/96] gi|283480096|emb|CAY76012.1| 50S ribosomal protein L3 [Erwinia pyrifoliae DSM 12163] gi|291200739|emb|CBJ47872.1| 50S ribosomal subunit protein L3 [Erwinia amylovora ATCC 49946] gi|291555286|emb|CBA23589.1| 50S ribosomal protein L3 [Erwinia amylovora CFBP1430] gi|310765598|gb|ADP10548.1| 50S ribosomal protein L3 [Erwinia sp. Ejp617] gi|312174031|emb|CBX82284.1| 50S ribosomal protein L3 [Erwinia amylovora ATCC BAA-2158] Length = 209 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 93/210 (44%), Positives = 132/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L+ +GY A+QV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKGLENDGYTAIQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR + + VG + F + VDVTG + GKGF+G Sbjct: 62 KPAAGHFAKAGVEAGRGLWEFRTAEGAEFT-VGQSINVDIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209 >gi|119899706|ref|YP_934919.1| 50S ribosomal protein L3 [Azoarcus sp. BH72] gi|166233115|sp|A1KB27|RL3_AZOSB RecName: Full=50S ribosomal protein L3 gi|119672119|emb|CAL96033.1| 50S ribosomal protein L3 [Azoarcus sp. BH72] Length = 212 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 104/213 (48%), Positives = 137/213 (64%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +GR IPVTVL + + +V +T + +GY AVQV G+ + Sbjct: 1 MSLGLVGRKVGMTRIFADDGRSIPVTVLDVSDNKVTQIKTPEADGYSAVQVAFGKRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V KP+ G + V P + L EFRV+ + L G S F+VGQ VDVTG++IGKG Sbjct: 61 VVKPIAGHLAKAGVEPSRVLKEFRVEPEGLASLKAGDQVSVEIFSVGQKVDVTGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNF RA+HG S+SH S GS G QDPGRVF K+MAG+ G + T LEV Sbjct: 121 FSGPIKRHNFSSNRASHGNSVSHNSPGSIGMAQDPGRVFPGKRMAGQYGAVQRTTLGLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LVKG VPGA K ++VR + K+ Sbjct: 181 VRVDAERQLLLVKGAVPGA-KGGDVVVRPAIKA 212 >gi|308172007|ref|YP_003918712.1| 50S ribosomal protein L3 (BL3) [Bacillus amyloliquefaciens DSM 7] gi|307604871|emb|CBI41242.1| ribosomal protein L3 (BL3) [Bacillus amyloliquefaciens DSM 7] gi|328551817|gb|AEB22309.1| 50S ribosomal protein L3 [Bacillus amyloliquefaciens TA208] gi|328910077|gb|AEB61673.1| ribosomal protein L3 (BL3) [Bacillus amyloliquefaciens LL3] Length = 209 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 130/212 (61%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQLGFDDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +PK+ + E R D D +G F+ G++VDVTG++ GKGF Sbjct: 61 SNKPEKGHVAKAETAPKRFVKELRGV-DMDAYEIGQEVKVEIFSAGEIVDVTGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH +HG S HR GS G DP RVFK K + GRMGG+++TV+NLEVV Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPV-DPNRVFKGKLLPGRMGGDQITVQNLEVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA+K + I V+ + KS Sbjct: 178 KVDAERNLLLIKGNVPGARK-ALITVKSAVKS 208 >gi|157372776|ref|YP_001480765.1| 50S ribosomal protein L3 [Serratia proteamaculans 568] gi|166990940|sp|A8GKJ7|RL3_SERP5 RecName: Full=50S ribosomal protein L3 gi|157324540|gb|ABV43637.1| ribosomal protein L3 [Serratia proteamaculans 568] Length = 209 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 129/210 (61%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +KLGMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+ Sbjct: 2 IGLVGKKLGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTTGSKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR + ++ G S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRTAEGEEFT-AGQNISVEIFAEVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG +G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA + I V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGATGGNLI-VKPAVKA 209 >gi|2113866|emb|CAA73672.1| rplC [Mycobacterium bovis BCG] Length = 217 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 91/214 (42%), Positives = 124/214 (57%), Gaps = 3/214 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ R PVTV+ V RT +++GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDESNRVAPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP+ G +++ V+P++ L E R+ D VG + F G VDVTG + GKG Sbjct: 63 NKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV NL V Sbjct: 123 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLV 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + G++L+KG VPG + ++VR + K Sbjct: 183 HKVDAENGVLLIKGAVPG-RTGGLVMVRSAIKRG 215 >gi|251793827|ref|YP_003008559.1| 50S ribosomal protein L3 [Aggregatibacter aphrophilus NJ8700] gi|247535226|gb|ACS98472.1| ribosomal protein L3 [Aggregatibacter aphrophilus NJ8700] Length = 208 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 97/210 (46%), Positives = 132/210 (62%), Gaps = 3/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V RK+GMT ++N +G +PVTV+ ++ +V +TL+ +GY AVQV G K V+ Sbjct: 2 IGLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKASRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V + L+EFR + ++ +G + F + VDVTG + GKGF G Sbjct: 62 KPEVGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV V Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S ++V+ + K+ Sbjct: 180 DAERKLLLVKGAVPGA-TGSDVIVKPAVKA 208 >gi|307106714|gb|EFN54959.1| hypothetical protein CHLNCDRAFT_48876 [Chlorella variabilis] Length = 234 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 107/209 (51%), Positives = 141/209 (67%), Gaps = 2/209 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++ G R+P+TVL +D+CQVV +T DK GY A+Q+G+G + K + +RG F + Sbjct: 1 MTQEWDAWGVRVPLTVLWVDDCQVVQVKTDDKEGYTALQLGSGSKRPKQLRGTLRGHFDA 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 V+PK++L EFRV D LLPVG S+F GQ VDVTG +IGKGF G MKR F G Sbjct: 61 AGVAPKRRLAEFRVSPD-ALLPVGHELRASHFVAGQFVDVTGTSIGKGFQGVMKRWGFAG 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 A+HG S++HR+ GSTG QDPG+VFK KKM GRMGG RVTV+N +V VD R L+ V Sbjct: 120 QPASHGNSLAHRAAGSTGACQDPGKVFKGKKMPGRMGGERVTVQNNQVFRVDPLRNLLYV 179 Query: 192 KGCVPGAKKNSWILVRDSFKSAVNCKGKV 220 +G VPG K +++LVRDS K + + + Sbjct: 180 RGHVPG-HKGNFVLVRDSAKKTLEQQPPL 207 >gi|253995718|ref|YP_003047782.1| 50S ribosomal protein L3 [Methylotenera mobilis JLW8] gi|253982397|gb|ACT47255.1| ribosomal protein L3 [Methylotenera mobilis JLW8] Length = 216 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 86/212 (40%), Positives = 126/212 (59%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ +G +PVTVL + +V +T +GY +QV G + Sbjct: 1 MSLGLIGRKVGMTRVFTEDGASVPVTVLEVVPNRVTQIKTTASDGYTGLQVAYGTRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++K + G ++ + + EF V D G+ + F GQ VDVTG ++GKG Sbjct: 61 INKALTGHYAKSGSAAGAGIHEFSVGDDVLANYTPGANITVDIFQAGQKVDVTGTSLGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+GA+KRH+F RA+HG S SH GS G QDPGRVF K+M G +G +VT +NLE+ Sbjct: 121 FAGAIKRHHFSSNRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMPGHLGAVKVTTQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+L+KG +PG+ K ++VR + K Sbjct: 181 VRVDVERNLLLIKGAIPGS-KGGDVVVRPAIK 211 >gi|225016285|ref|ZP_03705477.1| hypothetical protein CLOSTMETH_00188 [Clostridium methylpentosum DSM 5476] gi|224950960|gb|EEG32169.1| hypothetical protein CLOSTMETH_00188 [Clostridium methylpentosum DSM 5476] Length = 211 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 84/213 (39%), Positives = 126/213 (59%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT +++ G+ IPVTV+ C VV +T++ +GY AVQVG + K Sbjct: 1 MKKAIIGKKVGMTQIFDENGKVIPVTVVEAGPCVVVQKKTVENDGYEAVQVGFSDLKPHK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP G F+ + +PK+ L EFR+ +D L +G + F G +VDV G + GKGF Sbjct: 61 VNKPTAGHFAKADAAPKRHLKEFRL-EDCASLNLGDLIKADVFAEGDIVDVCGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR+ L+A+HG R GS G DP R+ K KKM G+MG VT++NL VV Sbjct: 120 AGTIKRYGNASLKASHGTGPVGRHAGSMGAASDPSRIPKGKKMPGQMGNETVTIQNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + LI ++G +PG + + +S K A Sbjct: 180 KVDAENNLIALRGAIPGPN-GGIVTIANSVKKA 211 >gi|187934203|ref|YP_001884473.1| 50S ribosomal protein L3 [Clostridium botulinum B str. Eklund 17B] gi|188590013|ref|YP_001919672.1| 50S ribosomal protein L3 [Clostridium botulinum E3 str. Alaska E43] gi|251780648|ref|ZP_04823568.1| 50S ribosomal protein L3 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|226725151|sp|B2UYB0|RL3_CLOBA RecName: Full=50S ribosomal protein L3 gi|226725152|sp|B2TIH5|RL3_CLOBB RecName: Full=50S ribosomal protein L3 gi|187722356|gb|ACD23577.1| 50S ribosomal protein L3 [Clostridium botulinum B str. Eklund 17B] gi|188500294|gb|ACD53430.1| 50S ribosomal protein L3 [Clostridium botulinum E3 str. Alaska E43] gi|243084963|gb|EES50853.1| 50S ribosomal protein L3 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 209 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 88/212 (41%), Positives = 128/212 (60%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT ++N G+ IPVTV+ C VV +T++K+GY A+QVG G+ + K Sbjct: 1 MKKAIMGKKIGMTQIFNEAGKVIPVTVVEAGPCVVVQKKTVEKDGYEAIQVGFGDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G F V K+ L EFR+ +D VG F +G +DV+G++ GKGF Sbjct: 61 VNKPAKGHFEKAGVVLKRTLKEFRL-EDVSQYEVGQEIKADVFEIGDKIDVSGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR N THG S R+ GS G DP R FKNK+M G MG TV NLEVV Sbjct: 120 QGVIKRWNQQRGPMTHG-SKFKRAPGSMGASSDPSRTFKNKRMPGHMGCVNTTVMNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ L+L+KG +PG K + + +R++ K+ Sbjct: 179 KVIAEKNLLLIKGGIPGPNKGTVV-IRNAVKA 209 >gi|291542035|emb|CBL15145.1| LSU ribosomal protein L3P [Ruminococcus bromii L2-63] Length = 210 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 90/212 (42%), Positives = 130/212 (61%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT +++ +G IPVTV+ C V +T++ +GY +VQ+G G+ K Sbjct: 1 MQKAIIGKKIGMTQIFDEKGIMIPVTVVEAGPCVVTAKKTVENDGYASVQLGYGDVKPHK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+GFF V+PKK L EFR D D +G + FT G +DVTG + GKG Sbjct: 61 VNKPMKGFFDKAGVAPKKTLKEFRFT-DTDAYSIGDLVKADVFTPGDKIDVTGKSKGKGT 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF L+ +HG R GS G P RV+K K+MAG +G +VTV+NL VV Sbjct: 120 AGVIKRWNFHRLKESHGTGPCVRHGGSIGACSSPSRVWKGKRMAGHLGAEQVTVQNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + LI VKG +PG K ++++DS K+ Sbjct: 180 KVDAENNLIAVKGAIPGPNKG-IVVIKDSVKA 210 >gi|148827966|ref|YP_001292719.1| 50S ribosomal protein L3 [Haemophilus influenzae PittGG] gi|166233148|sp|A5UHT0|RL3_HAEIG RecName: Full=50S ribosomal protein L3 gi|148719208|gb|ABR00336.1| 50S ribosomal protein L3 [Haemophilus influenzae PittGG] Length = 208 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 97/210 (46%), Positives = 132/210 (62%), Gaps = 3/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V RK+GMT ++N +G +PVTV+ ++ +V +TL+ +GY AVQV G K V+ Sbjct: 2 IGLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V + L+EFR + ++ +G + F + VDVTG + GKGF G Sbjct: 62 KPEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV V Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA N ++V+ + K+ Sbjct: 180 DAERKLLLVKGSVPGAI-NGNVIVKPAVKA 208 >gi|186477588|ref|YP_001859058.1| 50S ribosomal protein L3 [Burkholderia phymatum STM815] gi|226725142|sp|B2JIG6|RL3_BURP8 RecName: Full=50S ribosomal protein L3 gi|184194047|gb|ACC72012.1| ribosomal protein L3 [Burkholderia phymatum STM815] Length = 219 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 95/212 (44%), Positives = 127/212 (59%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGTRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EF++ L G+V F VGQ VDV G +IGKG Sbjct: 61 VTKPLAGHLAKAGVQAGEILKEFQIDAAKAAELSSGAVIGVDLFEVGQKVDVQGTSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D R L+LVKG VPGA K + V + K Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211 >gi|56418641|ref|YP_145959.1| 50S ribosomal protein L3 [Geobacillus kaustophilus HTA426] gi|261417607|ref|YP_003251289.1| 50S ribosomal protein L3 [Geobacillus sp. Y412MC61] gi|297528482|ref|YP_003669757.1| 50S ribosomal protein L3 [Geobacillus sp. C56-T3] gi|319765265|ref|YP_004130766.1| 50S ribosomal protein L3 [Geobacillus sp. Y412MC52] gi|81819840|sp|Q5L3Z7|RL3_GEOKA RecName: Full=50S ribosomal protein L3 gi|56378483|dbj|BAD74391.1| 50S ribosomal protein L3 [Geobacillus kaustophilus HTA426] gi|261374064|gb|ACX76807.1| 50S ribosomal protein L3 [Geobacillus sp. Y412MC61] gi|297251734|gb|ADI25180.1| 50S ribosomal protein L3 [Geobacillus sp. C56-T3] gi|317110131|gb|ADU92623.1| 50S ribosomal protein L3 [Geobacillus sp. Y412MC52] Length = 213 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 86/204 (42%), Positives = 121/204 (59%), Gaps = 3/204 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ G IPVTV+H V+ +T++ +GY A+Q+G + K Sbjct: 1 MTKGILGRKIGMTQIFAENGDLIPVTVIHATPNVVLQKKTIENDGYEAIQLGFEDISEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G + N +PK+ + E R D+ VG F+ G++VDVTG++ GKGF Sbjct: 61 ANKPQIGHAAKANTAPKRFIREIRGANIDE-YEVGQEVKVDIFSEGEIVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G P RVFK K + GRMGG RVT++NL++V Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGSIA-PNRVFKTKNLPGRMGGERVTIQNLKIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWI 204 VD +R L+L+KG VPG +K I Sbjct: 178 KVDPERNLLLIKGNVPGPRKGLVI 201 >gi|325663062|ref|ZP_08151512.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 4_1_37FAA] gi|331086669|ref|ZP_08335746.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325470516|gb|EGC73746.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 4_1_37FAA] gi|330409835|gb|EGG89270.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 226 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 92/228 (40%), Positives = 126/228 (55%), Gaps = 19/228 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G PVTVL C V +T++ +GY AVQVG + K K Sbjct: 1 MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQIKTVENDGYSAVQVGFVDKKDKI 60 Query: 61 VS----------------KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V+ K +G F VS K+ + EF+ + D+ + F Sbjct: 61 VNVDKNGKKTIVHRHGTTKAEKGHFDKAGVSSKRFVREFKFENADEF-ELAQEIKADIFA 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G VD T ++ GKGF GA+KRHN THG S HR GS G DP +VFK KKM Sbjct: 120 AGDKVDATAISKGKGFQGAIKRHNQHRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G MG R+T++NLE+V VD + LILVKG VPG KK S + +++S K+ Sbjct: 179 GHMGSKRITIQNLEIVRVDAENNLILVKGSVPGPKK-SLVTIKESVKA 225 >gi|237728655|ref|ZP_04559136.1| 50S ribosomal protein L3 [Citrobacter sp. 30_2] gi|226909277|gb|EEH95195.1| 50S ribosomal protein L3 [Citrobacter sp. 30_2] Length = 209 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 131/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ D + VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRL-ADGEEYTVGQNISVELFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA ++V+ + K+ Sbjct: 181 DAERNLLLVKGGVPGA-TGCDLIVKPAVKA 209 >gi|225432181|ref|XP_002268657.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297736812|emb|CBI26013.3| unnamed protein product [Vitis vinifera] Length = 307 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 103/215 (47%), Positives = 141/215 (65%), Gaps = 2/215 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G +A K GM+ +++ G R+P+TVL LD+ V +T +K G A+QVG G+ K K++ Sbjct: 59 RTGAIAVKCGMSALWDKWGARVPITVLWLDDNIVSQVKTFEKEGLNALQVGCGQKKAKHL 118 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F + V K+KL EF V +D LLPVG+ +F GQ VDVTG+T GKGF Sbjct: 119 TKPEVGHFRAQGVPLKRKLREFPVTED-ALLPVGTTIGVRHFVPGQYVDVTGITRGKGFQ 177 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR F G+ A+HG S+SHRS GSTG R PG+VFK KKM GRMGG + TVKN+ V Sbjct: 178 GGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGKQRTVKNVWVYK 237 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 +D R L+ V+G VPGA+ N ++ ++D+ + Sbjct: 238 IDPTRNLMWVRGQVPGAEGN-FVFIKDAVYKKPDA 271 >gi|283835737|ref|ZP_06355478.1| hypothetical protein CIT292_10129 [Citrobacter youngae ATCC 29220] gi|291068416|gb|EFE06525.1| 50S ribosomal protein L3 [Citrobacter youngae ATCC 29220] Length = 209 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 131/210 (62%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ D + VG S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFTKAGVEAGRGLWEFRL-ADGEEYTVGQSISVELFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA ++V+ + K+ Sbjct: 181 DAERNLLLVKGGVPGA-TGCDLIVKPAVKA 209 >gi|237653996|ref|YP_002890310.1| 50S ribosomal protein L3 [Thauera sp. MZ1T] gi|237625243|gb|ACR01933.1| ribosomal protein L3 [Thauera sp. MZ1T] Length = 212 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 100/213 (46%), Positives = 138/213 (64%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G+ IPVTVL + + +V +T+D +GY AVQ+ G+ + Sbjct: 1 MSLGLVGRKVGMTRIFAEDGKTIPVTVLDVSDNRVSQIKTIDTDGYAAVQIAYGKRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQ-KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP+ G + V P + + EFRV+ + + G F VGQ VDVTG+TIGKG Sbjct: 61 ITKPVAGHLAKAGVEPCRGIKEFRVEAEQAGSMNAGDAVGADLFQVGQKVDVTGVTIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNF RA+HG SISH S GS G QDPGRVF K+MAG+ G + T + LE+ Sbjct: 121 FSGPIKRHNFSSNRASHGNSISHNSPGSIGMAQDPGRVFPGKRMAGQYGNVQRTTQGLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LVKG VPGA K ++VR + K+ Sbjct: 181 VRVDVERQLLLVKGAVPGA-KGGDVVVRPAVKA 212 >gi|121997649|ref|YP_001002436.1| ribosomal protein L3 [Halorhodospira halophila SL1] gi|166233149|sp|A1WVC2|RL3_HALHL RecName: Full=50S ribosomal protein L3 gi|121589054|gb|ABM61634.1| LSU ribosomal protein L3P [Halorhodospira halophila SL1] Length = 216 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 103/217 (47%), Positives = 134/217 (61%), Gaps = 6/217 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT V+ EG IPVTV+ D +V +T + +GY AVQV AG K + Sbjct: 1 MAIGIVGRKRGMTRVFTEEGGSIPVTVVEADPNRVTQVKTEESDGYRAVQVTAGRRKPQR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQK-----DDDLLPVGSVFSPSYFTVGQLVDVTGMT 115 V KP G F+ V + ++EFR+ K D+++ G F GQ VDVTG T Sbjct: 61 VRKPEAGHFARAGVEAGRGVWEFRLDKGQRASDEEMPETGGSIDVGGFEAGQKVDVTGTT 120 Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175 G+GF+G ++RHNF R THG S SHR GS G Q PGRVFK KKMAG+MG R T++ Sbjct: 121 KGRGFAGTVRRHNFRAQRNTHGNSKSHRVPGSIGQCQSPGRVFKGKKMAGQMGNRRATIQ 180 Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 NLEVV VD +R L+L++G VPGA S ++VR + K+ Sbjct: 181 NLEVVRVDSERNLLLIRGAVPGAV-GSDLIVRPASKA 216 >gi|300779845|ref|ZP_07089701.1| 50S ribosomal protein L3 [Corynebacterium genitalium ATCC 33030] gi|300533955|gb|EFK55014.1| 50S ribosomal protein L3 [Corynebacterium genitalium ATCC 33030] Length = 217 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 87/214 (40%), Positives = 123/214 (57%), Gaps = 2/214 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RKLGMT +++ E R IPVTV+ C V RT + +GY A+Q+ G+ + Sbjct: 6 KGILGRKLGMTQIFDEENRVIPVTVVEAGPCVVTQIRTEETDGYSAIQIAYGDIDPRKAK 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G + +P++ + E R+ D +G + + F VDV G T GKG++G Sbjct: 66 KPQAGHYQKAGQNPRRHVAEIRMD-DTSAYELGQEVTVNIFDGDTFVDVAGTTKGKGYAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRH F G A HG +HR GS G PGRVFK K+MAGRMG NRVT +NL++ + Sbjct: 125 AMKRHGFAGQGAAHGNQAAHRRVGSIGGCATPGRVFKGKRMAGRMGSNRVTTQNLKIQRI 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D L+L+KG +PGA K S + V+ + K + Sbjct: 185 DGDSNLLLIKGAIPGA-KGSLVTVKTAVKGGAHA 217 >gi|153210324|ref|ZP_01947604.1| ribosomal protein L3 [Coxiella burnetii 'MSU Goat Q177'] gi|212218074|ref|YP_002304861.1| 50S ribosomal protein L3 [Coxiella burnetii CbuK_Q154] gi|226725156|sp|B6J5D2|RL3_COXB1 RecName: Full=50S ribosomal protein L3 gi|120575146|gb|EAX31770.1| ribosomal protein L3 [Coxiella burnetii 'MSU Goat Q177'] gi|212012336|gb|ACJ19716.1| LSU ribosomal protein L3P [Coxiella burnetii CbuK_Q154] Length = 217 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 88/213 (41%), Positives = 126/213 (59%), Gaps = 1/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK GMT ++ G IPVTV+ + ++ +T++ +GY A QV G+ Sbjct: 1 MSIGLIGRKCGMTRIFTETGSSIPVTVVEVIPNRITQVKTVETDGYRAFQVAYGKKSSAR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G +S V L EFR+ ++ G F GQ+VDV G+T GKG Sbjct: 61 VNKPLAGHYSKAAVEAGNALREFRLGNEELTEAKAGDELKVDIFKEGQVVDVRGLTRGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRHNF ATHG S+SHR+ GS G Q PGRV+K KKMAG++G TV++ E+ Sbjct: 121 FAGTVKRHNFRTQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGQLGNVYCTVQSQEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + VD +R L+L+KG +PGA I+ + S K Sbjct: 181 IKVDVERNLLLIKGALPGAPGGEVIITQSSKKR 213 >gi|18401521|ref|NP_566579.1| RPL3P (RIBOSOMAL PROTEIN L3 PLASTID); structural constituent of ribosome [Arabidopsis thaliana] gi|42559534|sp|Q9LRN8|RK3B_ARATH RecName: Full=50S ribosomal protein L3-2, chloroplastic; Flags: Precursor gi|11994685|dbj|BAB02923.1| 50S ribosomal protein L3 [Arabidopsis thaliana] Length = 324 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 101/209 (48%), Positives = 146/209 (69%), Gaps = 2/209 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K GMT +++ G+RIP+++L +D+ V +T++K G A+Q+G G+ K K++ Sbjct: 76 RTGIIAVKCGMTALWDKWGKRIPISILWVDDNIVSQVKTVEKEGIFALQIGCGQKKPKHL 135 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SK + G F + V K+KL EF V +D LLPVG+ +F GQ VDVTG+T GKGF Sbjct: 136 SKAVVGHFRAQGVPLKRKLREFPVTED-ALLPVGTSLGVRHFVPGQYVDVTGITRGKGFQ 194 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F G+ A+HG S+SHRS GSTG R PG+VFK +KMAGRMG ++ TVKN+ V Sbjct: 195 GCMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGADQRTVKNVWVYK 254 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 +D R L+ V+G VPGA+ N ++ ++D++ Sbjct: 255 IDPARNLMWVRGQVPGAEGN-FVFIKDAW 282 >gi|83648852|ref|YP_437287.1| ribosomal protein L3 [Hahella chejuensis KCTC 2396] gi|109893432|sp|Q2S912|RL3_HAHCH RecName: Full=50S ribosomal protein L3 gi|83636895|gb|ABC32862.1| Ribosomal protein L3 [Hahella chejuensis KCTC 2396] Length = 212 Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats. Identities = 93/213 (43%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ +G +PVTV+ ++ + ++L+ +GY A+QV +G K Sbjct: 1 MAIGLVGRKAGMTRLFEDDGAAVPVTVIQVEKNVIAQVKSLEVDGYRAIQVTSGSVKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQK-DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KPM G F+ V + + EF + D VG S + F GQ VDV+G + GKG Sbjct: 61 VNKPMAGHFAKAGVEAGRVVCEFTLDATDSAEYKVGDEVSVTIFEAGQKVDVSGRSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KR NF ATHG S+SHR+ GS G Q PGRVFK KKMAG+MG VTV+ L+V Sbjct: 121 FAGVIKRWNFSTQDATHGNSLSHRAPGSIGQNQSPGRVFKGKKMAGQMGNKNVTVQTLKV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD+++GL+L+KG VPGA + ++++ + K+ Sbjct: 181 VRVDEEKGLLLIKGAVPGA-TGADVVIKPAVKA 212 >gi|270264373|ref|ZP_06192639.1| 50S ribosomal protein L3 [Serratia odorifera 4Rx13] gi|270041509|gb|EFA14607.1| 50S ribosomal protein L3 [Serratia odorifera 4Rx13] Length = 209 Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats. Identities = 94/210 (44%), Positives = 130/210 (61%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTTGSKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR+ + ++ G S F + VDVTG + GKGF+G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLAEGEEFT-AGQNISVEIFADVKKVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG +G RVTV++L+VV V Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVRV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA + I V+ + K+ Sbjct: 181 DAERNLLLVKGAVPGATGGNLI-VKPAVKA 209 >gi|238021591|ref|ZP_04602017.1| hypothetical protein GCWU000324_01491 [Kingella oralis ATCC 51147] gi|237866205|gb|EEP67247.1| hypothetical protein GCWU000324_01491 [Kingella oralis ATCC 51147] Length = 215 Score = 260 bits (666), Expect = 7e-68, Method: Composition-based stats. Identities = 106/214 (49%), Positives = 138/214 (64%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V+ +G +PVTVL + +V ++ + +GY AVQV GE K + Sbjct: 1 MALGLVGRKVGMTRVFTEQGASVPVTVLEMTANRVTQVKSKETDGYAAVQVTFGEKKANH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF V ++ L G V + S F VGQLVDVTG + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLHEFVVSEEKAAELKAGDVITVSLFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV++LE+ Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKSTVQHLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V VD++R L+LVKG VPGA NS ++VR S K A Sbjct: 181 VRVDEERNLLLVKGAVPGAV-NSNVVVRHSVKKA 213 >gi|329118598|ref|ZP_08247302.1| 50S ribosomal protein L3 [Neisseria bacilliformis ATCC BAA-1200] gi|327465333|gb|EGF11614.1| 50S ribosomal protein L3 [Neisseria bacilliformis ATCC BAA-1200] Length = 214 Score = 260 bits (666), Expect = 7e-68, Method: Composition-based stats. Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K K+ Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLEITPNRVTQLKSEDTDGYTAVQVTFGQKKAKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 K G F+ V + L EF + + L VG S S F VGQLVD+TG + GKG Sbjct: 61 TGKAEAGHFAKAGVEAGRGLVEFALSAEKLSELQVGGEISVSLFEVGQLVDITGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNF R +HG S SHR GS G QDPGRVF ++MAG+ G + T +NL+V Sbjct: 121 FSGTIKRHNFDSQRTSHGNSRSHRVPGSIGMAQDPGRVFPGQRMAGQYGNTKSTAQNLQV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPGA NS ++VR K Sbjct: 181 VRVDAERNLLLVKGAVPGAV-NSDVIVRPGVK 211 >gi|317126861|ref|YP_004093143.1| 50S ribosomal protein L3 [Bacillus cellulosilyticus DSM 2522] gi|315471809|gb|ADU28412.1| 50S ribosomal protein L3 [Bacillus cellulosilyticus DSM 2522] Length = 211 Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 86/214 (40%), Positives = 125/214 (58%), Gaps = 4/214 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G +PVTV+ V+ +T + GY A+Q+G + K Sbjct: 1 MAKGILGKKIGMTQIFAENGEVVPVTVIEATPNVVLQKKTTEGEGYEAIQLGFDDKKQIQ 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G +PK+ + EFR+ + +G F VG +VDVTG + GKGF Sbjct: 61 QTKPAKGHAEKAKTNPKRFVKEFRLSNVAE-YEIGQEVKVDTFAVGDIVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRHN +HG S HR GS G DP V K K + GRMGG +VT++NLE+V Sbjct: 120 QGAIKRHNQSRGPMSHG-SRYHRRPGSMGPV-DPNHVRKGKLLPGRMGGEQVTIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 VD +R L+LVKG VPGA+K S++ V+ + K+ Sbjct: 178 RVDTERNLLLVKGNVPGARK-SYVTVQSAVKATA 210 >gi|147676655|ref|YP_001210870.1| 50S ribosomal protein L3 [Pelotomaculum thermopropionicum SI] gi|189042854|sp|A5D5J0|RL3_PELTS RecName: Full=50S ribosomal protein L3 gi|146272752|dbj|BAF58501.1| ribosomal protein L3 [Pelotomaculum thermopropionicum SI] Length = 210 Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 88/212 (41%), Positives = 124/212 (58%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G +PVTV+ C VV +T +K+GY A+Q+G G K ++ Sbjct: 1 MPKGLLGKKVGMTQIFTDTGLAVPVTVIEAGPCIVVQKKTPEKDGYSAIQLGFGAKKERS 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KPM G F + V P + L E RV+ + VG F G+ VDV G T G+GF Sbjct: 61 FNKPMLGHFLAARVRPLRYLREVRVENP-ETYQVGQEIKADIFAPGEKVDVVGTTKGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH F HG S HR GS G + P RVFK +++ G +G RVTV+NLEVV Sbjct: 120 AGGIKRHGFHRGPMAHG-SKYHRRPGSLGAKG-PARVFKGRRLPGHLGMERVTVQNLEVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD R L+ VKG VPG K +L++ + K+ Sbjct: 178 KVDADRNLLAVKGAVPGP-KGGLVLIKQAAKA 208 >gi|328675407|gb|AEB28082.1| LSU ribosomal protein L3p (L3e) [Francisella cf. novicida 3523] Length = 210 Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 98/212 (46%), Positives = 134/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ +G IPVTV+ ++ +V +T + +GY A+QV G K N Sbjct: 1 MSLGLVGRKCGMTRIFTEDGVSIPVTVVQVEANKVTQVKTTETDGYNAIQVTTGFKKRSN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP G ++ V P + L+EF + + VG+ + F GQ VDV G++ GKGF Sbjct: 61 VNKPAAGHYAKAGVEPGRGLWEFTIDNASE-YEVGASIDATIFQAGQKVDVRGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRHNF ATHG S+SHR HGSTG Q PGRVFKNKKMAG +G VT+++LEVV Sbjct: 120 QGGVKRHNFATQDATHGNSLSHRVHGSTGQNQTPGRVFKNKKMAGHLGNENVTIQSLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + GL+L+KG +PG+ I+V + KS Sbjct: 180 RVDAENGLLLLKGGIPGSVGGD-IIVTPAVKS 210 >gi|145225625|ref|YP_001136303.1| 50S ribosomal protein L3 [Mycobacterium gilvum PYR-GCK] gi|315445978|ref|YP_004078857.1| 50S ribosomal protein L3P [Mycobacterium sp. Spyr1] gi|189042852|sp|A4T1U2|RL3_MYCGI RecName: Full=50S ribosomal protein L3 gi|145218111|gb|ABP47515.1| LSU ribosomal protein L3P [Mycobacterium gilvum PYR-GCK] gi|315264281|gb|ADU01023.1| LSU ribosomal protein L3P [Mycobacterium sp. Spyr1] Length = 218 Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 90/215 (41%), Positives = 130/215 (60%), Gaps = 4/215 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ + +PVTV+ V RT +++GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTTERDGYSAVQLAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD---LLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 +KP+ G F++ V+P++ L E R+ ++D L VG + F G VDVTG + GK Sbjct: 63 NKPVTGQFAAAGVNPRRHLAELRLADNEDAGALYEVGQELTAEIFADGAYVDVTGTSKGK 122 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF+G MKRH F G A+HG HR GS G PGRVFK +M+GRMG +RVT +NL+ Sbjct: 123 GFAGTMKRHGFKGQGASHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGSDRVTTQNLK 182 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V VD + G++L+KG +PG + ++VR + K Sbjct: 183 VHKVDAENGVLLIKGAIPG-RNGGLVVVRSAIKRG 216 >gi|148263140|ref|YP_001229846.1| 50S ribosomal protein L3 [Geobacter uraniireducens Rf4] gi|189042846|sp|A5GAW5|RL3_GEOUR RecName: Full=50S ribosomal protein L3 gi|146396640|gb|ABQ25273.1| LSU ribosomal protein L3P [Geobacter uraniireducens Rf4] Length = 211 Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats. Identities = 94/212 (44%), Positives = 126/212 (59%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT ++ +GRRIPVTV+ C V+ +T +K+GY A+QVG + Sbjct: 1 MNKGLIGKKLGMTQIFAEDGRRIPVTVVEAGPCVVIQKKTKEKDGYSAIQVGFNSQEAAK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + + G + L E RV D VG V S F G LVDVTG +IGKGF Sbjct: 61 ANSAVVGHCKTAGSGVFSFLRELRVDN-ADQYSVGDVLSAEIFAPGDLVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G MKR F G RA+HG S HR+ GS GC P RVFKNKKM G++G +VTV+ L++V Sbjct: 120 QGVMKRWGFKGGRASHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQLGNEKVTVQRLKIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD LIL+ G +PG+ N +L++DS K+ Sbjct: 179 RVDAADNLILLNGAIPGS-TNGLVLIKDSVKA 209 >gi|328884426|emb|CCA57665.1| LSU ribosomal protein L3p [Streptomyces venezuelae ATCC 10712] Length = 218 Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats. Identities = 93/210 (44%), Positives = 126/210 (60%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ GE + V+ Sbjct: 10 KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDIDGYESVQIAFGEIDPRKVN 69 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 70 KPLKGHFAKADVTPRRHLVELR-TADASEYTLGQEITAEVFEAGVKVDVTGKSKGKGFAG 128 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF G +A+HG HR GS G PGRVFK +MAGRMG RVT +NL V +V Sbjct: 129 VMKRHNFRGGKASHGAHRVHRKPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTVHAV 188 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D ++GL+L+KG VPG +LVR + K Sbjct: 189 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKG 217 >gi|89100349|ref|ZP_01173214.1| 50S ribosomal protein L3 [Bacillus sp. NRRL B-14911] gi|89084970|gb|EAR64106.1| 50S ribosomal protein L3 [Bacillus sp. NRRL B-14911] Length = 208 Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats. Identities = 86/212 (40%), Positives = 128/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +++D +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVVEATGNVVLQVKSVDTDGYEAIQLGFEDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + + +PK+ + EFR D VG F G VDVTG++ GKGF Sbjct: 61 SNKPEQGHVAKADTAPKRFVREFRGV-DLAAYEVGQEVKVDIFAEGDTVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G++KRH +HG S HR GS G P RVFK K + GRMGG+++TV+NLE+V Sbjct: 120 QGSIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKALPGRMGGDQITVQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D +R L+L+KG VPGAKK + + ++ + K+ Sbjct: 178 KIDAERNLLLIKGNVPGAKK-ALLKIKTAVKA 208 >gi|325954992|ref|YP_004238652.1| 50S ribosomal protein L3 [Weeksella virosa DSM 16922] gi|323437610|gb|ADX68074.1| 50S ribosomal protein L3 [Weeksella virosa DSM 16922] Length = 209 Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats. Identities = 94/206 (45%), Positives = 130/206 (63%), Gaps = 2/206 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+ MT +++ G+ IP T++ C V RT +K+GY +VQ+G +AK KN S Sbjct: 2 SGIIGKKVAMTSLFDENGKNIPCTIIQAGPCVVTQVRTEEKDGYKSVQLGFDDAKEKNTS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 ++G F +PK+KL EF K D L +G G+ V VTG + GKGF G Sbjct: 62 AALKGHFKKAGTTPKRKLVEFYGDKWVDTLNLGDEVKVDLIQEGEYVSVTGTSKGKGFQG 121 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG +ATHG R+ GS G DP RVFK +MAGRMGG +VTV+NLEV+ Sbjct: 122 VVKRHGFGGVGQATHGQHNRLRAPGSIGAGSDPSRVFKGMRMAGRMGGKQVTVQNLEVLK 181 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 VD ++ L++VKG VPG KNS+++VR Sbjct: 182 VDTEQNLLIVKGAVPGP-KNSYVIVR 206 >gi|167759862|ref|ZP_02431989.1| hypothetical protein CLOSCI_02225 [Clostridium scindens ATCC 35704] gi|167662481|gb|EDS06611.1| hypothetical protein CLOSCI_02225 [Clostridium scindens ATCC 35704] Length = 226 Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats. Identities = 85/228 (37%), Positives = 125/228 (54%), Gaps = 19/228 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58 M+ ++A K+GMT +++ +G PVTVL C V +T++ +GY AVQVG + K Sbjct: 1 MKKAILATKVGMTQIFSEDGTLTPVTVLQAGPCVVTQVKTVENDGYDAVQVGFVDKKDKI 60 Query: 59 --------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V+K +G F+ VS K+ + EF+++ + + F Sbjct: 61 VNKDKSGKKEIAHRHGVTKAEQGHFAKAGVSGKRFVREFKLENAGE-YELAQEIKADIFE 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G +D T ++ GKGF GA+KRH THG S HR GS G DP +VFK KKM Sbjct: 120 AGDKIDATAISKGKGFQGAIKRHGQHRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G MG ++T++NLE+V VD + LILVKG VPG KK S + ++++ K+ Sbjct: 179 GHMGSKKITIQNLEIVRVDAENNLILVKGSVPGPKK-SLVTIKEAVKA 225 >gi|15676069|ref|NP_273200.1| 50S ribosomal protein L3 [Neisseria meningitidis MC58] gi|59802160|ref|YP_208872.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae FA 1090] gi|121634016|ref|YP_974261.1| 50S ribosomal protein L3 [Neisseria meningitidis FAM18] gi|218767168|ref|YP_002341680.1| 50S ribosomal protein L3 [Neisseria meningitidis Z2491] gi|240015096|ref|ZP_04722009.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae DGI18] gi|240081688|ref|ZP_04726231.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae FA19] gi|240122168|ref|ZP_04735130.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID24-1] gi|240124460|ref|ZP_04737416.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID332] gi|240129136|ref|ZP_04741797.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-93-1035] gi|254805814|ref|YP_003084035.1| 50S ribosomal protein L3 [Neisseria meningitidis alpha14] gi|260439541|ref|ZP_05793357.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae DGI2] gi|268597785|ref|ZP_06131952.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae FA19] gi|268683089|ref|ZP_06149951.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID332] gi|268687519|ref|ZP_06154381.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-93-1035] gi|291042777|ref|ZP_06568518.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae DGI2] gi|293398202|ref|ZP_06642407.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae F62] gi|304388943|ref|ZP_07370990.1| 50S ribosomal protein L3 [Neisseria meningitidis ATCC 13091] gi|42559565|sp|P60443|RL3_NEIMA RecName: Full=50S ribosomal protein L3 gi|42559566|sp|P60444|RL3_NEIMB RecName: Full=50S ribosomal protein L3 gi|81311149|sp|Q5F5S7|RL3_NEIG1 RecName: Full=50S ribosomal protein L3 gi|166233169|sp|A1KRH3|RL3_NEIMF RecName: Full=50S ribosomal protein L3 gi|7225360|gb|AAF40600.1| 50S ribosomal protein L3 [Neisseria meningitidis MC58] gi|59719055|gb|AAW90460.1| putative 50S ribosomal protein L3 [Neisseria gonorrhoeae FA 1090] gi|120865722|emb|CAM09451.1| 50S ribosomal protein L3 [Neisseria meningitidis FAM18] gi|121051176|emb|CAM07447.1| 50S ribosomal protein L3 [Neisseria meningitidis Z2491] gi|254669356|emb|CBA08445.1| 50S ribosomal protein L3 [Neisseria meningitidis alpha14] gi|268551573|gb|EEZ46592.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae FA19] gi|268623373|gb|EEZ55773.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID332] gi|268627803|gb|EEZ60203.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-93-1035] gi|291013211|gb|EFE05177.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae DGI2] gi|291611465|gb|EFF40535.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae F62] gi|304337077|gb|EFM03264.1| 50S ribosomal protein L3 [Neisseria meningitidis ATCC 13091] gi|308388358|gb|ADO30678.1| 50S ribosomal protein L3 [Neisseria meningitidis alpha710] gi|316985672|gb|EFV64618.1| ribosomal L3 family protein [Neisseria meningitidis H44/76] gi|319411374|emb|CBY91785.1| 50S ribosomal protein L3 [Neisseria meningitidis WUE 2594] gi|325129061|gb|EGC51910.1| ribosomal protein L3 [Neisseria meningitidis N1568] gi|325131084|gb|EGC53807.1| ribosomal protein L3 [Neisseria meningitidis OX99.30304] gi|325133054|gb|EGC55726.1| ribosomal protein L3 [Neisseria meningitidis M6190] gi|325135148|gb|EGC57774.1| ribosomal protein L3 [Neisseria meningitidis M13399] gi|325137200|gb|EGC59795.1| ribosomal protein L3 [Neisseria meningitidis M0579] gi|325139032|gb|EGC61578.1| ribosomal protein L3 [Neisseria meningitidis ES14902] gi|325141156|gb|EGC63656.1| ribosomal protein L3 [Neisseria meningitidis CU385] gi|325143232|gb|EGC65571.1| ribosomal protein L3 [Neisseria meningitidis 961-5945] gi|325145339|gb|EGC67616.1| ribosomal protein L3 [Neisseria meningitidis M01-240013] gi|325197429|gb|ADY92885.1| ribosomal protein L3 [Neisseria meningitidis G2136] gi|325199355|gb|ADY94810.1| ribosomal protein L3 [Neisseria meningitidis H44/76] gi|325203023|gb|ADY98477.1| ribosomal protein L3 [Neisseria meningitidis M01-240149] gi|325203262|gb|ADY98715.1| ribosomal protein L3 [Neisseria meningitidis M01-240355] gi|325205235|gb|ADZ00688.1| ribosomal protein L3 [Neisseria meningitidis M04-240196] gi|325207178|gb|ADZ02630.1| ribosomal protein L3 [Neisseria meningitidis NZ-05/33] Length = 214 Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats. Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPGA NS ++VR S K Sbjct: 181 VRVDAERQLLLVKGAVPGAV-NSDVVVRPSVK 211 >gi|213964789|ref|ZP_03392988.1| 50S ribosomal protein L3 [Corynebacterium amycolatum SK46] gi|213952325|gb|EEB63708.1| 50S ribosomal protein L3 [Corynebacterium amycolatum SK46] Length = 218 Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats. Identities = 88/214 (41%), Positives = 120/214 (56%), Gaps = 2/214 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT +++ E R +PVTV+ C V RT + +GY AVQ+ GE + V+ Sbjct: 7 KGILGTKLGMTQIFDEENRVVPVTVVEAGPCVVTQVRTKETDGYDAVQIAYGEIDPRKVN 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P++ E R D VG F + VDVTG + G GF+G Sbjct: 67 KPEAGHFKKAGVTPRRHSVEIR-TPDASSYEVGQSVGVDIFGEIEYVDVTGTSKGHGFAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G A HG +HR G G PGRVFK K+MAGRMG +RVT +NL++ V Sbjct: 126 GMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGKRMAGRMGNDRVTTQNLKIQKV 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D L+L+KG VPGA + ++V+ + K + Sbjct: 186 DADANLLLIKGAVPGA-RGGLLVVKTATKGGAHA 218 >gi|210611125|ref|ZP_03288739.1| hypothetical protein CLONEX_00929 [Clostridium nexile DSM 1787] gi|210152112|gb|EEA83119.1| hypothetical protein CLONEX_00929 [Clostridium nexile DSM 1787] Length = 241 Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats. Identities = 91/228 (39%), Positives = 126/228 (55%), Gaps = 19/228 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G PVTVL C V +T++ +GY AVQVG + K K Sbjct: 16 MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQIKTVENDGYSAVQVGFVDKKDKI 75 Query: 61 VSK----------------PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V+K +G F VS K+ + EF+ + ++ + F Sbjct: 76 VNKDKNGKKEIVHRHGTTKAEKGHFDKAGVSSKRFVREFKFENAEEFT-LAQEIKADIFA 134 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G VD T ++ GKGF GA+KRHN THG S HR GS G DP +VFK KKM Sbjct: 135 AGDKVDATAISKGKGFQGAIKRHNQHRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKMP 193 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G MG R+T++NLE+V VD + LILVKG VPG KK S + +++S K+ Sbjct: 194 GHMGSKRITIQNLEIVRVDAENNLILVKGSVPGPKK-SLVTIKESVKA 240 >gi|311070763|ref|YP_003975686.1| 50S ribosomal protein L3 [Bacillus atrophaeus 1942] gi|310871280|gb|ADP34755.1| 50S ribosomal protein L3 [Bacillus atrophaeus 1942] Length = 209 Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 129/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEAAANVVLQKKTAENDGYEAIQLGFDDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +PK+ + E R + D VG F+ G++VDVTG++ GKGF Sbjct: 61 SNKPEKGHVAKAETAPKRFVKELRGVEMDA-YEVGQEVKVEIFSAGEIVDVTGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH +HG S HR GS G DP RVFK K + GRMGG ++TV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPV-DPNRVFKGKLLPGRMGGEQITVQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA+K S I V+ + KS Sbjct: 178 KVDAERNLLLIKGNVPGARK-SLITVKSAVKS 208 >gi|269792794|ref|YP_003317698.1| 50S ribosomal protein L3 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100429|gb|ACZ19416.1| ribosomal protein L3 [Thermanaerovibrio acidaminovorans DSM 6589] Length = 209 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 101/209 (48%), Positives = 137/209 (65%), Gaps = 2/209 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V++ EGR +PVTV+ CQVV RT +KNGY AVQ+G G K + Sbjct: 1 MSMGILGRKVGMTQVFDAEGRAVPVTVVEAGPCQVVEVRTPEKNGYSAVQLGFGSVKPGS 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++PM+G+F+ V PK+ L EFRV + G F+ G+ VDV G++ GKG+ Sbjct: 61 VNRPMKGYFAKNGVEPKRWLREFRVDEGHG-YEKGQYVKVDLFSEGETVDVVGVSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR FGG A+HG S HR GS+G PG +FK K M GRMGG RVTVKNL+V Sbjct: 120 AGVMKRFGFGGGPASHGSSKFHRQPGSSGANSYPGHIFKGKTMPGRMGGERVTVKNLKVF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +VD + LIL++G +PGA K+ +L+R + Sbjct: 180 AVDVENNLILLRGAIPGA-KDGLVLIRKA 207 >gi|30018380|ref|NP_830011.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 14579] gi|42559608|sp|Q81J42|RL3_BACCR RecName: Full=50S ribosomal protein L3 gi|29893920|gb|AAP07212.1| LSU ribosomal protein L3P [Bacillus cereus ATCC 14579] Length = 210 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 93/211 (44%), Positives = 132/211 (62%), Gaps = 4/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ + V+ +T + +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGELIPVTVIAANPNVVLQKKTTETDGYNAIQLGFEDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + + +PK+ + E R D D L VG F G++VDVTG++ GKGF Sbjct: 61 TNKPEQGHTAKASTTPKRFIREIR-DADVDGLEVGQEVKVDVFATGEIVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH +HG S HR GS G P RVFK KK+AGRMGG++VT++NLE+V Sbjct: 120 QGVIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L+LVKG VPGAKK S ++V+ + K Sbjct: 178 QVDTERNLLLVKGNVPGAKK-SLVVVQGAVK 207 >gi|68536923|ref|YP_251628.1| 50S ribosomal protein L3 [Corynebacterium jeikeium K411] gi|109893423|sp|Q4JT47|RL3_CORJK RecName: Full=50S ribosomal protein L3 gi|68264522|emb|CAI38010.1| 50S ribosomal protein L3 [Corynebacterium jeikeium K411] Length = 218 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 89/214 (41%), Positives = 125/214 (58%), Gaps = 2/214 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +KLGMT +++ E R +PVTV+ C V R+ + +GY AVQ+ GE + V+ Sbjct: 7 KGILGKKLGMTQIFDEENRVVPVTVVEAGPCVVTQVRSKETDGYEAVQIAFGEIDPRKVN 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P++ + E RV D VG + F + VDVTG T GKG++G Sbjct: 67 KPAAGHFKKAGVTPRRHVAEIRV-ADASSYEVGQDVTVDIFNDVKFVDVTGTTKGKGYAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G A HG +HR GS G PGRVFK K+MAGRMG +RVT +NL++ V Sbjct: 126 GMKRHGFAGQGAAHGNQAAHRRVGSIGQAATPGRVFKGKRMAGRMGNDRVTQQNLKLAKV 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D + L+L+KG VPG ++V+ + K + Sbjct: 186 DAESNLLLIKGAVPGVN-GGLVVVKTAVKGGAHA 218 >gi|146340057|ref|YP_001205105.1| 50S ribosomal protein L3 [Bradyrhizobium sp. ORS278] gi|166233121|sp|A4YSJ2|RL3_BRASO RecName: Full=50S ribosomal protein L3 gi|146192863|emb|CAL76868.1| 50S ribosomal subunit protein L3 [Bradyrhizobium sp. ORS278] Length = 239 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 129/219 (58%), Positives = 158/219 (72%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G IPVTVL L NCQVV HRT +KNGY+A+Q+G+G K Sbjct: 1 MRSGVIAQKVGMTRVFTETGEHIPVTVLKLGNCQVVGHRTTEKNGYVALQLGSGSRKTVY 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + K RG F+ V PK+KL EFRV +D L+PVG+ +F VGQ VDVTG ++GKGF Sbjct: 61 MPKAERGQFAVAKVEPKRKLAEFRVSED-SLIPVGAEIQADHFVVGQFVDVTGTSVGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ +KNKKM G MG +R+T NL VV Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTWKNKKMPGHMGVDRITTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 D +RGLILV+G VPG+ K WI VRD+ K + + Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWISVRDAVKKPLPKEAP 217 >gi|226305341|ref|YP_002765299.1| 50S ribosomal protein L3 [Rhodococcus erythropolis PR4] gi|229489469|ref|ZP_04383332.1| 50S ribosomal protein L3 [Rhodococcus erythropolis SK121] gi|259709732|sp|C0ZW25|RL3_RHOE4 RecName: Full=50S ribosomal protein L3 gi|226184456|dbj|BAH32560.1| 50S ribosomal protein L3 [Rhodococcus erythropolis PR4] gi|229323566|gb|EEN89324.1| 50S ribosomal protein L3 [Rhodococcus erythropolis SK121] Length = 218 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 88/214 (41%), Positives = 123/214 (57%), Gaps = 2/214 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ R +PVTV+ V RT +++GY AVQ+ G + V+ Sbjct: 7 KGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQIRTEERDGYSAVQLAFGAIDPRKVN 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V+P++ + E RV D VG + F G VDVTG + GKGF+G Sbjct: 67 KPTSGQFTKAGVTPRRHVVELRVADTSD-YEVGQELTAEVFEDGAYVDVTGTSKGKGFAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G A+HG HR GS G PGRVFK +M+GRMG +R+T +NL V V Sbjct: 126 TMKRHGFKGQGASHGTQAVHRRPGSIGGCATPGRVFKGMRMSGRMGSDRITTQNLSVHKV 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D + GL+L+KG +PG +K ++V+ + K Sbjct: 186 DAENGLLLIKGAIPG-RKGGLVIVKSAVKGGARA 218 >gi|194689948|gb|ACF79058.1| unknown [Zea mays] Length = 254 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 104/209 (49%), Positives = 146/209 (69%), Gaps = 2/209 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GV+ K GM+ +++ G ++P+TVL +D+ V +T +K G+ A+Q+GAG+ K K++ Sbjct: 7 RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVTQVKTAEKEGFFALQLGAGQKKEKHL 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F + V K+KL EF V +D LLPVG+ + +F GQ VDVTG+T GKGF+ Sbjct: 67 TKPEVGHFRAQGVPLKRKLREFPVTED-ALLPVGTSITVRHFVPGQFVDVTGITKGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR+ FGG+ A+HG S++HRS GSTG R PGRVFKN+KM GRMGG + TVKN+ V Sbjct: 126 GVMKRYGFGGMPASHGTSLAHRSGGSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 +D R L+ +KG VPG + S+I V+DS Sbjct: 186 IDPARNLLYLKGQVPGPQ-GSFIFVKDSI 213 >gi|295394348|ref|ZP_06804573.1| 50S ribosomal protein L3 [Brevibacterium mcbrellneri ATCC 49030] gi|294972806|gb|EFG48656.1| 50S ribosomal protein L3 [Brevibacterium mcbrellneri ATCC 49030] Length = 224 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 91/211 (43%), Positives = 122/211 (57%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ +PVTV+ + V R + +GY AVQ+G GE + V+ Sbjct: 16 KGLMGTKLGMTQVWDENNNLVPVTVISASSNVVTQIRNEEVDGYSAVQIGYGEIDPRKVN 75 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP +G F V+P++ L E R D +G S F G VDVT T GKGF+G Sbjct: 76 KPAKGHFEKAGVAPRRHLVELR-TADAGEYELGQELSTEVFEAGIKVDVTANTKGKGFAG 134 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G PGRVFK +MAGRMG R T +NL + S+ Sbjct: 135 VMKRHGFAGVGASHGQHRNHRKPGSIGGAATPGRVFKGMRMAGRMGNVRHTTQNLTIHSI 194 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + L+L+KG VPG K + +LVR + K A Sbjct: 195 DSENNLLLIKGAVPGP-KGAVVLVRSAAKGA 224 >gi|132952|sp|P28600|RL3_BACST RecName: Full=50S ribosomal protein L3 gi|40102|emb|CAA47402.1| ribosomal protein L3 [Geobacillus stearothermophilus] Length = 213 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 85/204 (41%), Positives = 120/204 (58%), Gaps = 3/204 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ G IPVTV+H V+ +T++ +GY A+Q+G + K Sbjct: 1 MTKGILGRKIGMTQIFAENGDLIPVTVIHATPNVVLQKKTIENDGYEAIQLGFEDISEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G + N +PK+ + E R ++ VG F+ G +VDVTG++ GKGF Sbjct: 61 ANKPQIGHAAKANTAPKRFIREIRGANINE-YEVGQEVKVDIFSEGDIVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G P RVFK K + GRMGG RVT++NL++V Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGAIA-PNRVFKTKNLPGRMGGERVTIQNLKIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWI 204 VD +R L+L+KG VPG +K I Sbjct: 178 KVDPERNLLLIKGNVPGPRKGLVI 201 >gi|166031659|ref|ZP_02234488.1| hypothetical protein DORFOR_01359 [Dorea formicigenerans ATCC 27755] gi|166028636|gb|EDR47393.1| hypothetical protein DORFOR_01359 [Dorea formicigenerans ATCC 27755] Length = 226 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 88/228 (38%), Positives = 125/228 (54%), Gaps = 19/228 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++N +G PVTVL C V +T++ +GY AVQVG + K K Sbjct: 1 MKKAILATKVGMTQIFNEDGTLTPVTVLQAGPCVVTQIKTVENDGYEAVQVGFVDKKDKT 60 Query: 61 VSK----------------PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V+K +G F+ V+ K+ + EF+ + D + F Sbjct: 61 VNKDKNGKKEIVHRHGVTKAEQGHFAKAGVTGKRFVKEFKFENAAD-YALAQEIKADIFE 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G +D T ++ GKGF GA+KRHN HG S HR GS G DP +VFK KKM Sbjct: 120 AGDKIDATAISKGKGFQGAIKRHNQHRGPMAHG-SKFHRHQGSNGAASDPSKVFKGKKMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G MG ++T++NLEVV VD + L+LVKG VPG KK S + +R++ K+ Sbjct: 179 GHMGSKKITIQNLEVVRVDAENNLLLVKGSVPGPKK-SLVTIREAVKA 225 >gi|331699176|ref|YP_004335415.1| 50S ribosomal protein L3 [Pseudonocardia dioxanivorans CB1190] gi|326953865|gb|AEA27562.1| 50S ribosomal protein L3 [Pseudonocardia dioxanivorans CB1190] Length = 217 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 89/213 (41%), Positives = 126/213 (59%), Gaps = 2/213 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 +G++ +KLGMT V++ R +PVTV+ V R+ + +GY+AVQ+ G + V+ Sbjct: 7 TGILGKKLGMTQVFDENNRVVPVTVVQAGPNVVTQIRSQETDGYVAVQLAFGAVDPRRVN 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V+P++ E R D +G + F G +VDV G + GKG++G Sbjct: 67 KPETGHFAKAGVTPRRYTVELRTT-DAGEYSLGQEITAEVFEPGAVVDVVGTSKGKGYAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF GL A+HG HRS GS G PGRVFK +MAGRMG RVT +NL V V Sbjct: 126 VMKRHNFKGLGASHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGSVRVTTQNLTVHRV 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D +RGL+L+KG VPG + + ++V+ + K Sbjct: 186 DAERGLLLIKGAVPGP-RGALVVVKTAAKGGAK 217 >gi|161870915|ref|YP_001600095.1| 50S ribosomal protein L3 [Neisseria meningitidis 053442] gi|189042853|sp|A9M3W6|RL3_NEIM0 RecName: Full=50S ribosomal protein L3 gi|161596468|gb|ABX74128.1| 50S ribosomal protein L3 [Neisseria meningitidis 053442] Length = 214 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 104/212 (49%), Positives = 135/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG++ GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGISKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPGA NS ++VR S K Sbjct: 181 VRVDAERQLLLVKGAVPGAV-NSDVVVRPSVK 211 >gi|225869536|ref|YP_002745483.1| 50S ribosomal protein L3 [Streptococcus equi subsp. equi 4047] gi|254803692|sp|C0M660|RL3_STRE4 RecName: Full=50S ribosomal protein L3 gi|225698940|emb|CAW91967.1| 50S ribosomal protein L3 [Streptococcus equi subsp. equi 4047] Length = 208 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 91/213 (42%), Positives = 130/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + + Sbjct: 1 MTKGILGEKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAIQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDIFAAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVS-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207 >gi|224827017|ref|ZP_03700114.1| ribosomal protein L3 [Lutiella nitroferrum 2002] gi|224600683|gb|EEG06869.1| ribosomal protein L3 [Lutiella nitroferrum 2002] Length = 214 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 97/215 (45%), Positives = 128/215 (59%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTVL + +V +T + +GY A+QV G K Sbjct: 1 MSLGLVGRKVGMTRIFAEDGASIPVTVLDMAANRVTQIKTAEVDGYEAIQVTYGSCKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + + G + F VGQLVDVTG + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLGEFVLNAEQLSQFKPGDAITVEIFQVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNF RA+HG S SH + GS G QDPGRV K+MAG+ G + TV+ LE+ Sbjct: 121 FSGVIKRHNFSSNRASHGNSRSHNTPGSIGQAQDPGRVLPGKRMAGQYGNVQSTVQRLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 V +D +R LILVKG VPGA N ++VR S K+ Sbjct: 181 VRIDTERQLILVKGAVPGA-TNGDVVVRPSVKAGA 214 >gi|163938118|ref|YP_001643002.1| 50S ribosomal protein L3 [Bacillus weihenstephanensis KBAB4] gi|218895245|ref|YP_002443656.1| ribosomal protein L3 [Bacillus cereus G9842] gi|228970299|ref|ZP_04130958.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|229053956|ref|ZP_04195390.1| 50S ribosomal protein L3 [Bacillus cereus AH603] gi|229131118|ref|ZP_04260030.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST196] gi|226725130|sp|B7IT19|RL3_BACC2 RecName: Full=50S ribosomal protein L3 gi|226725133|sp|A9VP77|RL3_BACWK RecName: Full=50S ribosomal protein L3 gi|163860315|gb|ABY41374.1| ribosomal protein L3 [Bacillus weihenstephanensis KBAB4] gi|218544022|gb|ACK96416.1| ribosomal protein L3 [Bacillus cereus G9842] gi|228652331|gb|EEL08256.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST196] gi|228721374|gb|EEL72895.1| 50S ribosomal protein L3 [Bacillus cereus AH603] gi|228789408|gb|EEM37328.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|326937905|gb|AEA13801.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar chinensis CT-43] Length = 210 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 93/211 (44%), Positives = 132/211 (62%), Gaps = 4/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ + V+ +T + +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGELIPVTVIAANPNVVLQKKTTETDGYNAIQLGFEDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + + +PK+ + E R D D L VG F G++VDVTG++ GKGF Sbjct: 61 TNKPEQGHTAKASTTPKRFIREIR-DADVDGLEVGQEVKVEVFAAGEIVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH +HG S HR GS G P RVFK KK+AGRMGG++VT++NLE+V Sbjct: 120 QGVIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L+LVKG VPGAKK S ++V+ + K Sbjct: 178 QVDTERNLLLVKGNVPGAKK-SLVVVQGAVK 207 >gi|114327218|ref|YP_744375.1| 50S ribosomal protein L3 [Granulibacter bethesdensis CGDNIH1] gi|122327802|sp|Q0BUQ0|RL3_GRABC RecName: Full=50S ribosomal protein L3 gi|114315392|gb|ABI61452.1| LSU ribosomal protein L3P [Granulibacter bethesdensis CGDNIH1] Length = 231 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 126/212 (59%), Positives = 160/212 (75%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++ARKLGMT ++ +G +PVTVLHLD QVV RT +++GY AVQ+G G+AK K+ Sbjct: 1 MRTGLIARKLGMTRLFKEDGTHVPVTVLHLDQVQVVDTRTKERDGYTAVQLGFGQAKPKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSK +G F+ V V PKKKL EFRV +D +L G+ S +F VGQ VDVTG + GKGF Sbjct: 61 VSKANKGHFARVKVEPKKKLVEFRVAED-AILEPGATLSAEHFLVGQKVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NF GL A+HGVSISHRSHGSTG RQDPG+ FKNKKMAG +G RVT +N+EV Sbjct: 120 AGAMKRWNFAGLEASHGVSISHRSHGSTGNRQDPGKTFKNKKMAGHLGDERVTTQNVEVA 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD RGL++++G +PGA K ++LVRD+ K Sbjct: 180 HVDAARGLLMIRGSIPGA-KGGYVLVRDAVKR 210 >gi|241759650|ref|ZP_04757751.1| 50S ribosomal protein L3 [Neisseria flavescens SK114] gi|241320022|gb|EER56403.1| 50S ribosomal protein L3 [Neisseria flavescens SK114] Length = 214 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 104/212 (49%), Positives = 135/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG Sbjct: 61 VNKTEAGHFAKAGVEAGRGLVEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG RA+HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 121 FSGTIKRHNFGAQRASHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPG+ NS ++VR S K Sbjct: 181 VRVDAERQLLLVKGAVPGSV-NSDVVVRPSVK 211 >gi|239943577|ref|ZP_04695514.1| 50S ribosomal protein L3 [Streptomyces roseosporus NRRL 15998] gi|239990030|ref|ZP_04710694.1| 50S ribosomal protein L3 [Streptomyces roseosporus NRRL 11379] gi|291447044|ref|ZP_06586434.1| 50S ribosomal protein L3 [Streptomyces roseosporus NRRL 15998] gi|291349991|gb|EFE76895.1| 50S ribosomal protein L3 [Streptomyces roseosporus NRRL 15998] Length = 214 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 98/211 (46%), Positives = 129/211 (61%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGMT V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+ Sbjct: 6 KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F+ +V+P++ L E R D +G + + F G VDVTG + GKGF+G Sbjct: 66 KPLKGHFAKADVTPRRHLVELR-TPDASEYTLGQEVTAAVFESGVKVDVTGKSKGKGFAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL + +V Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+L+KG VPG +LVR + K A Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214 >gi|289706533|ref|ZP_06502883.1| 50S ribosomal protein L3 [Micrococcus luteus SK58] gi|289556668|gb|EFD50009.1| 50S ribosomal protein L3 [Micrococcus luteus SK58] Length = 216 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 90/211 (42%), Positives = 124/211 (58%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ + + IPVTV+ D V R+ + +GY AVQ+ G+ + V+ Sbjct: 8 KGLLGTKLGMTQVWDEDNKLIPVTVVKADPNVVTQLRSEETDGYTAVQIAYGQIDPRRVT 67 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F V+P++ L E R D +G + F GQ VDV G T GKGF+G Sbjct: 68 KPLAGHFEKAGVTPRRHLVELR-TADAAEYELGQDVTVEVFEAGQKVDVVGTTKGKGFAG 126 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRH F G+ A+HG +HR GS G PGRVFK ++M GRMG R T NL + + Sbjct: 127 AMKRHGFAGVGASHGAHKNHRKPGSVGGASTPGRVFKGQRMPGRMGAVRQTTMNLTLHGI 186 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + L+L+KG VPG+ K +LVR + K A Sbjct: 187 DVENNLLLIKGAVPGS-KGQVVLVRSAVKGA 216 >gi|221069450|ref|ZP_03545555.1| ribosomal protein L3 [Comamonas testosteroni KF-1] gi|264676442|ref|YP_003276348.1| ribosomal protein L3 [Comamonas testosteroni CNB-2] gi|299531236|ref|ZP_07044647.1| 50S ribosomal protein L3 [Comamonas testosteroni S44] gi|220714473|gb|EED69841.1| ribosomal protein L3 [Comamonas testosteroni KF-1] gi|262206954|gb|ACY31052.1| ribosomal protein L3 [Comamonas testosteroni CNB-2] gi|298720819|gb|EFI61765.1| 50S ribosomal protein L3 [Comamonas testosteroni S44] Length = 224 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 90/214 (42%), Positives = 129/214 (60%), Gaps = 3/214 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G +PVTV+ + N +V +T + +GY+A+QV G K V+K Sbjct: 8 GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVALQVTFGARKASRVTK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121 P G + V + EFRV + G+V F+VGQ VDV G +IGKG++ Sbjct: 68 PQAGHLAKAGVEAGEVTREFRVTDETAGKYAAGAVLPVAELFSVGQKVDVQGTSIGKGYA 127 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNF RA+HG S SH GS G QDPGRVF K+M G MG VT +NL+VV Sbjct: 128 GTIKRHNFSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTTQNLDVVR 187 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +D+ R L+L+KG +PGA K ++ VR + K+ + Sbjct: 188 IDEARQLLLIKGAIPGA-KGGFVSVRPAIKAKAS 220 >gi|297834662|ref|XP_002885213.1| hypothetical protein ARALYDRAFT_479224 [Arabidopsis lyrata subsp. lyrata] gi|297331053|gb|EFH61472.1| hypothetical protein ARALYDRAFT_479224 [Arabidopsis lyrata subsp. lyrata] Length = 323 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 100/209 (47%), Positives = 144/209 (68%), Gaps = 2/209 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K GMT +++ G R+P+++L +D+ V +T++K G A+Q+G G+ K K++ Sbjct: 75 RTGIIAVKCGMTALWDKWGARVPISILWVDDNIVSQVKTVEKEGIFALQIGCGQKKPKHL 134 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SK + G F + V K+KL EF V +D LLPVG+ +F GQ VDVTG+T GKGF Sbjct: 135 SKAVVGHFRAQGVPLKRKLREFPVTED-ALLPVGTSLGVRHFVPGQYVDVTGITRGKGFQ 193 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F G+ +HG S+SHRS GSTG R PG+VFK KKMAGRMG ++ TVKN+ V Sbjct: 194 GCMKRHGFSGMPGSHGASLSHRSGGSTGQRDAPGKVFKGKKMAGRMGADQRTVKNVWVYK 253 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 +D R L+ V+G VPGA+ N ++ ++D++ Sbjct: 254 IDPARNLMWVRGQVPGAEGN-FVFIKDAW 281 >gi|55821905|ref|YP_140347.1| 50S ribosomal protein L3 [Streptococcus thermophilus LMG 18311] gi|55823821|ref|YP_142262.1| 50S ribosomal protein L3 [Streptococcus thermophilus CNRZ1066] gi|81820218|sp|Q5LXR1|RL3_STRT1 RecName: Full=50S ribosomal protein L3 gi|81820383|sp|Q5M2B3|RL3_STRT2 RecName: Full=50S ribosomal protein L3 gi|55737890|gb|AAV61532.1| 50S ribosomal protein L3 [Streptococcus thermophilus LMG 18311] gi|55739806|gb|AAV63447.1| 50S ribosomal protein L3 [Streptococcus thermophilus CNRZ1066] Length = 208 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VGS + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSEITVDIFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207 >gi|107103776|ref|ZP_01367694.1| hypothetical protein PaerPA_01004847 [Pseudomonas aeruginosa PACS2] Length = 200 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 92/201 (45%), Positives = 128/201 (63%), Gaps = 3/201 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++ EG IPVTV+ ++ +V +T + +GY AVQV AGE + V+K G F+ Sbjct: 1 MTRIFTEEGVSIPVTVIEVEPNRVTQFKTEETDGYRAVQVTAGERRASRVTKAQAGHFAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 NV+ + ++EFR+ ++ G + F GQ+VDVTG + GKGF+G +KR NF G Sbjct: 61 ANVAAGRGVWEFRL--GEEQYAAGDQITVDLFQAGQMVDVTGESKGKGFAGTIKRWNFRG 118 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 THG S+SHR GS G Q PGRVFK KKM+G +G RVTV++LE+V VD +R L+LV Sbjct: 119 QDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHLGAERVTVQSLEIVRVDAERNLLLV 178 Query: 192 KGCVPGAKKNSWILVRDSFKS 212 KG VPGA ++VR + K+ Sbjct: 179 KGAVPGATGGD-VIVRPAAKA 198 >gi|171778375|ref|ZP_02919554.1| hypothetical protein STRINF_00405 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282906|gb|EDT48330.1| hypothetical protein STRINF_00405 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 208 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 93/213 (43%), Positives = 130/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGQEITVDTFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLEVV Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207 >gi|95931442|ref|ZP_01314148.1| ribosomal protein L3 [Desulfuromonas acetoxidans DSM 684] gi|95132510|gb|EAT14203.1| ribosomal protein L3 [Desulfuromonas acetoxidans DSM 684] Length = 210 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 95/213 (44%), Positives = 126/213 (59%), Gaps = 5/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M +G++ +KLGMT ++ G RIPVTV+ C VV + +D +GY AVQ+G GE K Sbjct: 2 MVNGILGKKLGMTQIFTESGMRIPVTVIEAGPCTVVQKKVVDTDGYDAVQLGFGEQKAHR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119 ++KP G F L E + L VG+ F+ G +VDV G + GKG Sbjct: 62 INKPKMGHFKKAGKGVFASLREM--DGEIAELEVGAEIVCGDVFSAGDIVDVMGTSKGKG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR NF G R+THG S HR+ G+ GC P RVFK KKMAG+MG RVT++NLE+ Sbjct: 120 FQGVMKRWNFSGGRSTHG-SKFHRAPGAIGCSAWPSRVFKGKKMAGQMGNERVTIQNLEI 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V V + LILVKG +PG KN + +R + K+ Sbjct: 179 VDVRADQNLILVKGAIPGP-KNGLVTIRKAIKA 210 >gi|319639549|ref|ZP_07994296.1| 50S ribosomal protein L3 [Neisseria mucosa C102] gi|317399120|gb|EFV79794.1| 50S ribosomal protein L3 [Neisseria mucosa C102] Length = 214 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 103/212 (48%), Positives = 134/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLVEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPG+ NS ++VR S K Sbjct: 181 VRVDAERQLLLVKGAVPGSV-NSDVVVRPSVK 211 >gi|302536251|ref|ZP_07288593.1| 50S ribosomal protein L3 [Streptomyces sp. C] gi|302445146|gb|EFL16962.1| 50S ribosomal protein L3 [Streptomyces sp. C] Length = 214 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 98/211 (46%), Positives = 129/211 (61%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGMT V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+ Sbjct: 6 KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDIDGYESVQIAFGEIDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 66 KPLKGHFAKADVTPRRHLVELRTS-DASEYTLGQEITAEVFESGVKVDVTGNSKGKGFAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF GL A HGV HRS GS G PGRVFK +MAGRMG RVT +NL + +V Sbjct: 125 VMKRHNFRGLGAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+L+KG VPG +LVR + K A Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214 >gi|296313365|ref|ZP_06863306.1| 50S ribosomal protein L3 [Neisseria polysaccharea ATCC 43768] gi|296840076|gb|EFH24014.1| 50S ribosomal protein L3 [Neisseria polysaccharea ATCC 43768] Length = 214 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 104/212 (49%), Positives = 135/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY+AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYIAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPGA NS ++VR S K Sbjct: 181 VRVDAERQLLLVKGAVPGAV-NSDVVVRPSVK 211 >gi|30260301|ref|NP_842678.1| 50S ribosomal protein L3 [Bacillus anthracis str. Ames] gi|42779191|ref|NP_976438.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 10987] gi|47525366|ref|YP_016715.1| 50S ribosomal protein L3 [Bacillus anthracis str. 'Ames Ancestor'] gi|49183144|ref|YP_026396.1| 50S ribosomal protein L3 [Bacillus anthracis str. Sterne] gi|49479271|ref|YP_034462.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52145108|ref|YP_081721.1| 50S ribosomal protein L3 [Bacillus cereus E33L] gi|118475879|ref|YP_893030.1| 50S ribosomal protein L3 [Bacillus thuringiensis str. Al Hakam] gi|206972204|ref|ZP_03233151.1| 50S ribosomal protein L3 [Bacillus cereus AH1134] gi|217957685|ref|YP_002336229.1| 50S ribosomal protein L3 [Bacillus cereus AH187] gi|218230754|ref|YP_002364959.1| 50S ribosomal protein L3 [Bacillus cereus B4264] gi|218901314|ref|YP_002449148.1| ribosomal protein L3 [Bacillus cereus AH820] gi|222093880|ref|YP_002527930.1| 50S ribosomal protein l3 [Bacillus cereus Q1] gi|225862162|ref|YP_002747540.1| 50S ribosomal protein L3 [Bacillus cereus 03BB102] gi|227812783|ref|YP_002812792.1| 50S ribosomal protein L3 [Bacillus anthracis str. CDC 684] gi|228912849|ref|ZP_04076496.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228919060|ref|ZP_04082439.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228983365|ref|ZP_04143578.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229089241|ref|ZP_04220522.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-42] gi|229153888|ref|ZP_04282018.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 4342] gi|229182504|ref|ZP_04309755.1| 50S ribosomal protein L3 [Bacillus cereus BGSC 6E1] gi|229188395|ref|ZP_04315443.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 10876] gi|229194500|ref|ZP_04321303.1| 50S ribosomal protein L3 [Bacillus cereus m1293] gi|229603960|ref|YP_002864761.1| 50S ribosomal protein L3 [Bacillus anthracis str. A0248] gi|254684386|ref|ZP_05148246.1| 50S ribosomal protein L3 [Bacillus anthracis str. CNEVA-9066] gi|254720832|ref|ZP_05182624.1| 50S ribosomal protein L3 [Bacillus anthracis str. A1055] gi|254733589|ref|ZP_05191309.1| 50S ribosomal protein L3 [Bacillus anthracis str. Western North America USA6153] gi|254739507|ref|ZP_05197204.1| 50S ribosomal protein L3 [Bacillus anthracis str. Kruger B] gi|254751228|ref|ZP_05203266.1| 50S ribosomal protein L3 [Bacillus anthracis str. Vollum] gi|254756765|ref|ZP_05208794.1| 50S ribosomal protein L3 [Bacillus anthracis str. Australia 94] gi|296500944|ref|YP_003662644.1| 50S ribosomal protein L3 [Bacillus thuringiensis BMB171] gi|300119578|ref|ZP_07057122.1| 50S ribosomal protein L3 [Bacillus cereus SJ1] gi|301051847|ref|YP_003790058.1| 50S ribosomal protein L3 [Bacillus anthracis CI] gi|42559609|sp|Q81VT0|RL3_BACAN RecName: Full=50S ribosomal protein L3 gi|81824428|sp|Q63H90|RL3_BACCZ RecName: Full=50S ribosomal protein L3 gi|81828437|sp|Q6HPQ8|RL3_BACHK RecName: Full=50S ribosomal protein L3 gi|81831213|sp|Q73F96|RL3_BACC1 RecName: Full=50S ribosomal protein L3 gi|166233117|sp|A0R8I0|RL3_BACAH RecName: Full=50S ribosomal protein L3 gi|226725129|sp|B7JKB9|RL3_BACC0 RecName: Full=50S ribosomal protein L3 gi|226725131|sp|B7HJ48|RL3_BACC4 RecName: Full=50S ribosomal protein L3 gi|226725132|sp|B7HQU4|RL3_BACC7 RecName: Full=50S ribosomal protein L3 gi|254803651|sp|C3P9Q5|RL3_BACAA RecName: Full=50S ribosomal protein L3 gi|254803652|sp|C3LJ82|RL3_BACAC RecName: Full=50S ribosomal protein L3 gi|254803653|sp|C1ET39|RL3_BACC3 RecName: Full=50S ribosomal protein L3 gi|254803654|sp|B9IZJ4|RL3_BACCQ RecName: Full=50S ribosomal protein L3 gi|30253622|gb|AAP24164.1| 50S ribosomal protein L3 [Bacillus anthracis str. Ames] gi|42735106|gb|AAS39046.1| ribosomal protein L3 [Bacillus cereus ATCC 10987] gi|47500514|gb|AAT29190.1| ribosomal protein L3 [Bacillus anthracis str. 'Ames Ancestor'] gi|49177071|gb|AAT52447.1| ribosomal protein L3 [Bacillus anthracis str. Sterne] gi|49330827|gb|AAT61473.1| ribosomal protein L3 (50S ribosomal protein L3) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51978577|gb|AAU20127.1| ribosomal protein L3 (50S ribosomal protein L3) [Bacillus cereus E33L] gi|118415104|gb|ABK83523.1| LSU ribosomal protein L3P [Bacillus thuringiensis str. Al Hakam] gi|206732778|gb|EDZ49953.1| 50S ribosomal protein L3 [Bacillus cereus AH1134] gi|217067429|gb|ACJ81679.1| ribosomal protein L3 [Bacillus cereus AH187] gi|218158711|gb|ACK58703.1| ribosomal protein L3 [Bacillus cereus B4264] gi|218534762|gb|ACK87160.1| ribosomal protein L3 [Bacillus cereus AH820] gi|221237928|gb|ACM10638.1| ribosomal protein L3 (50S ribosomal protein L3) [Bacillus cereus Q1] gi|225787302|gb|ACO27519.1| 50S ribosomal protein L3 [Bacillus cereus 03BB102] gi|227007571|gb|ACP17314.1| 50S ribosomal protein L3 [Bacillus anthracis str. CDC 684] gi|228588966|gb|EEK46981.1| 50S ribosomal protein L3 [Bacillus cereus m1293] gi|228595069|gb|EEK52840.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 10876] gi|228600959|gb|EEK58528.1| 50S ribosomal protein L3 [Bacillus cereus BGSC 6E1] gi|228629569|gb|EEK86266.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 4342] gi|228694080|gb|EEL47762.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-42] gi|228776355|gb|EEM24708.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228840585|gb|EEM85847.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228846785|gb|EEM91790.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229268368|gb|ACQ50005.1| 50S ribosomal protein L3 [Bacillus anthracis str. A0248] gi|296321996|gb|ADH04924.1| 50S ribosomal protein L3 [Bacillus thuringiensis BMB171] gi|298723050|gb|EFI63948.1| 50S ribosomal protein L3 [Bacillus cereus SJ1] gi|300374016|gb|ADK02920.1| 50S ribosomal protein L3 [Bacillus cereus biovar anthracis str. CI] gi|324324101|gb|ADY19361.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar finitimus YBT-020] Length = 210 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 93/211 (44%), Positives = 132/211 (62%), Gaps = 4/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ + V+ +T + +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGELIPVTVIAANPNVVLQKKTTETDGYNAIQLGFEDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + + +PK+ + E R D D L VG F G++VDVTG++ GKGF Sbjct: 61 TNKPEQGHTAKASTTPKRFIREIR-DADVDGLEVGQEVKVDVFATGEIVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH +HG S HR GS G P RVFK KK+AGRMGG++VT++NLE+V Sbjct: 120 QGVIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L+LVKG VPGAKK S ++V+ + K Sbjct: 178 QVDTERNLLLVKGNVPGAKK-SLVVVQGAVK 207 >gi|148256392|ref|YP_001240977.1| 50S ribosomal protein L3 [Bradyrhizobium sp. BTAi1] gi|166233120|sp|A5ELM7|RL3_BRASB RecName: Full=50S ribosomal protein L3 gi|146408565|gb|ABQ37071.1| LSU ribosomal protein L3P [Bradyrhizobium sp. BTAi1] Length = 239 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 130/219 (59%), Positives = 158/219 (72%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G IPVTVL L NCQVV HRT +KNGY+A+Q+G+G K Sbjct: 1 MRSGVIAQKVGMTRVFTETGEHIPVTVLKLGNCQVVGHRTTEKNGYVALQLGSGSRKTVY 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + K RG F+ V PK+K+ EFRV +D L+PVG+ +F VGQ VDVTG T+GKGF Sbjct: 61 MPKAERGQFAVAKVEPKRKVAEFRVSED-SLIPVGAEILADHFVVGQFVDVTGTTVGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ +KNKKM G MG +RVT NL VV Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTWKNKKMPGHMGVDRVTTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 D +RGLILV+G VPG+ K WI VRD+ K + + Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWISVRDAVKKPLPKEAP 217 >gi|163847923|ref|YP_001635967.1| 50S ribosomal protein L3 [Chloroflexus aurantiacus J-10-fl] gi|222525803|ref|YP_002570274.1| 50S ribosomal protein L3 [Chloroflexus sp. Y-400-fl] gi|189042836|sp|A9WH66|RL3_CHLAA RecName: Full=50S ribosomal protein L3 gi|254803663|sp|B9LJD2|RL3_CHLSY RecName: Full=50S ribosomal protein L3 gi|163669212|gb|ABY35578.1| ribosomal protein L3 [Chloroflexus aurantiacus J-10-fl] gi|222449682|gb|ACM53948.1| ribosomal protein L3 [Chloroflexus sp. Y-400-fl] Length = 210 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 89/212 (41%), Positives = 126/212 (59%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GM + +G IPVTV+ C V RT +++GY AVQ+G E + + Sbjct: 1 MIHGLLGRKIGMMQYFTAQGMAIPVTVIAAGPCIVTQIRTPERDGYSAVQLGYEEVEPRK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + + L EF P G V + F GQ VD++G + G+GF Sbjct: 61 LTKPQQGHLKASGGKMLRYLREFSADDPQAHTP-GEVVTVELFRPGQKVDISGTSKGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH F G THG S HR+ GS G PGRV+K ++MAGRMGG RVT++NLEVV Sbjct: 120 AGVVKRHGFRGGPKTHGQSDRHRAPGSIGAGTTPGRVWKGQRMAGRMGGTRVTIQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ L+LVKG VPGA +N + +R + K Sbjct: 180 EVLPEQNLLLVKGSVPGA-RNGLLQIRKAVKG 210 >gi|126453776|ref|YP_001068034.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1106a] gi|134283182|ref|ZP_01769883.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 305] gi|217424706|ref|ZP_03456203.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 576] gi|237814145|ref|YP_002898596.1| 50S ribosomal protein L3 [Burkholderia pseudomallei MSHR346] gi|238563921|ref|ZP_00438031.2| 50S ribosomal protein L3 [Burkholderia mallei GB8 horse 4] gi|242314689|ref|ZP_04813705.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1106b] gi|251767493|ref|ZP_02267491.2| 50S ribosomal protein L3 [Burkholderia mallei PRL-20] gi|254174782|ref|ZP_04881443.1| 50S ribosomal protein L3 [Burkholderia mallei ATCC 10399] gi|254198510|ref|ZP_04904931.1| 50S ribosomal protein L3 [Burkholderia pseudomallei S13] gi|254201239|ref|ZP_04907603.1| 50S ribosomal protein L3 [Burkholderia mallei FMH] gi|254206580|ref|ZP_04912931.1| 50S ribosomal protein L3 [Burkholderia mallei JHU] gi|254260454|ref|ZP_04951508.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1710a] gi|254300578|ref|ZP_04968023.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 406e] gi|254357118|ref|ZP_04973392.1| 50S ribosomal protein L3 [Burkholderia mallei 2002721280] gi|212288252|sp|A3P0B3|RL3_BURP0 RecName: Full=50S ribosomal protein L3 gi|126227418|gb|ABN90958.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1106a] gi|134245377|gb|EBA45470.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 305] gi|147747133|gb|EDK54209.1| 50S ribosomal protein L3 [Burkholderia mallei FMH] gi|147752122|gb|EDK59188.1| 50S ribosomal protein L3 [Burkholderia mallei JHU] gi|148026182|gb|EDK84267.1| 50S ribosomal protein L3 [Burkholderia mallei 2002721280] gi|157810515|gb|EDO87685.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 406e] gi|160695827|gb|EDP85797.1| 50S ribosomal protein L3 [Burkholderia mallei ATCC 10399] gi|169655250|gb|EDS87943.1| 50S ribosomal protein L3 [Burkholderia pseudomallei S13] gi|217392162|gb|EEC32187.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 576] gi|237506368|gb|ACQ98686.1| 50S ribosomal protein L3 [Burkholderia pseudomallei MSHR346] gi|238519676|gb|EEP83145.1| 50S ribosomal protein L3 [Burkholderia mallei GB8 horse 4] gi|242137928|gb|EES24330.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1106b] gi|243062596|gb|EES44782.1| 50S ribosomal protein L3 [Burkholderia mallei PRL-20] gi|254219143|gb|EET08527.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1710a] Length = 223 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 99/212 (46%), Positives = 132/212 (62%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 5 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 64 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR++ D L G+V P F VGQ VDV G++IGKG Sbjct: 65 VTKPLAGHLAKAGVEAGEILKEFRIEADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKG 124 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 125 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 184 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D R L+LVKG VPGA K + V + K Sbjct: 185 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 215 >gi|53720821|ref|YP_109807.1| 50S ribosomal protein L3 [Burkholderia pseudomallei K96243] gi|53723854|ref|YP_104166.1| 50S ribosomal protein L3 [Burkholderia mallei ATCC 23344] gi|76808912|ref|YP_335140.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1710b] gi|121599817|ref|YP_994456.1| 50S ribosomal protein L3 [Burkholderia mallei SAVP1] gi|124384577|ref|YP_001027895.1| 50S ribosomal protein L3 [Burkholderia mallei NCTC 10229] gi|126441597|ref|YP_001060750.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 668] gi|126449489|ref|YP_001082990.1| 50S ribosomal protein L3 [Burkholderia mallei NCTC 10247] gi|167721577|ref|ZP_02404813.1| 50S ribosomal protein L3 [Burkholderia pseudomallei DM98] gi|167740551|ref|ZP_02413325.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 14] gi|167817756|ref|ZP_02449436.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 91] gi|167826153|ref|ZP_02457624.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 9] gi|167847665|ref|ZP_02473173.1| 50S ribosomal protein L3 [Burkholderia pseudomallei B7210] gi|167896237|ref|ZP_02483639.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 7894] gi|167904619|ref|ZP_02491824.1| 50S ribosomal protein L3 [Burkholderia pseudomallei NCTC 13177] gi|167912884|ref|ZP_02499975.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 112] gi|167920844|ref|ZP_02507935.1| 50S ribosomal protein L3 [Burkholderia pseudomallei BCC215] gi|254180339|ref|ZP_04886937.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1655] gi|254190302|ref|ZP_04896810.1| 50S ribosomal protein L3 [Burkholderia pseudomallei Pasteur 52237] gi|81823913|sp|Q62GK5|RL3_BURMA RecName: Full=50S ribosomal protein L3 gi|81824632|sp|Q63Q11|RL3_BURPS RecName: Full=50S ribosomal protein L3 gi|109893415|sp|Q3JMR3|RL3_BURP1 RecName: Full=50S ribosomal protein L3 gi|166233124|sp|A3MRV4|RL3_BURM7 RecName: Full=50S ribosomal protein L3 gi|166233125|sp|A2S7H6|RL3_BURM9 RecName: Full=50S ribosomal protein L3 gi|166233126|sp|A1V8A3|RL3_BURMS RecName: Full=50S ribosomal protein L3 gi|166233127|sp|A3NEH9|RL3_BURP6 RecName: Full=50S ribosomal protein L3 gi|52211235|emb|CAH37224.1| 50S ribosomal protein L3 [Burkholderia pseudomallei K96243] gi|52427277|gb|AAU47870.1| ribosomal protein L3 [Burkholderia mallei ATCC 23344] gi|76578365|gb|ABA47840.1| ribosomal protein L3 [Burkholderia pseudomallei 1710b] gi|121228627|gb|ABM51145.1| 50S ribosomal protein L3 [Burkholderia mallei SAVP1] gi|124292597|gb|ABN01866.1| 50S ribosomal protein L3 [Burkholderia mallei NCTC 10229] gi|126221090|gb|ABN84596.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 668] gi|126242359|gb|ABO05452.1| 50S ribosomal protein L3 [Burkholderia mallei NCTC 10247] gi|157937978|gb|EDO93648.1| 50S ribosomal protein L3 [Burkholderia pseudomallei Pasteur 52237] gi|184210878|gb|EDU07921.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1655] Length = 219 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 99/212 (46%), Positives = 132/212 (62%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR++ D L G+V P F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEILKEFRIEADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D R L+LVKG VPGA K + V + K Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211 >gi|300857762|ref|YP_003782745.1| 50S ribosomal protein L3 [Corynebacterium pseudotuberculosis FRC41] gi|300685216|gb|ADK28138.1| 50S ribosomal protein L3 [Corynebacterium pseudotuberculosis FRC41] gi|302205500|gb|ADL09842.1| 50S ribosomal protein L3 [Corynebacterium pseudotuberculosis C231] gi|302330055|gb|ADL20249.1| 50S ribosomal protein L3 [Corynebacterium pseudotuberculosis 1002] gi|308275736|gb|ADO25635.1| 50S ribosomal protein L3 [Corynebacterium pseudotuberculosis I19] Length = 218 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 84/214 (39%), Positives = 120/214 (56%), Gaps = 2/214 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT +++ + R IPVTV+ C V RT++ +GY A+Q+ G+ + + Sbjct: 7 KGILGTKLGMTQIFDEDNRVIPVTVVEAGPCVVTQIRTIETDGYNAIQIAYGDIDPRKAN 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P++ + E R D +G + F VDVTG T GKG++G Sbjct: 67 KPATGHFKKAGVTPRRHVAEIR-MNDVSAYELGQDVTVEIFEGITFVDVTGTTKGKGYAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRH F G A HG +HR G G PGRVFK +MAGRMG +RVT +NL+V + Sbjct: 126 AMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGNDRVTTQNLKVQKI 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D LIL+KG +PG + + V+ + K + Sbjct: 186 DADANLILIKGAIPG-NRGGIVTVKTAVKGGAHA 218 >gi|255536154|ref|YP_003096525.1| LSU ribosomal protein L3p (L3e) [Flavobacteriaceae bacterium 3519-10] gi|255342350|gb|ACU08463.1| LSU ribosomal protein L3p (L3e) [Flavobacteriaceae bacterium 3519-10] Length = 208 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 96/206 (46%), Positives = 136/206 (66%), Gaps = 3/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ +P TV+ C V+ RT++K+GY A Q+G + KNV Sbjct: 2 SGIIGKKIGMTSLFDENGKNMPCTVIQAGPCSVLQVRTIEKDGYKAAQLGFDDKSEKNVG 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K + G F +PK KL EF + D L VG F+ G+ VDVTG + GKGF G Sbjct: 62 KALIGHFKKAGSAPKAKLVEFY-HEFVDKLSVGDEVKVDLFSQGEFVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRHNFGG ++ATHG R+ GS G DP RVFK +MAGRMGG +VTV+NL+V+ Sbjct: 121 VVKRHNFGGVMQATHGQHNRLRAPGSIGAGSDPSRVFKGMRMAGRMGGKQVTVQNLQVLR 180 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 VD+++ L++VKG VPGA KNS++++R Sbjct: 181 VDEEQNLLVVKGAVPGA-KNSYVIIR 205 >gi|290581289|ref|YP_003485681.1| 50S ribosomal protein L3 [Streptococcus mutans NN2025] gi|254998188|dbj|BAH88789.1| 50S ribosomal protein L3 [Streptococcus mutans NN2025] Length = 208 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG + F G +VDVTG T GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGQEITVEQFEAGDVVDVTGTTKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G P RVFK K +AGRMGGNRVT++NLE+V Sbjct: 118 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGNRVTIQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I+++ + K+A Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLIIIKSAVKAA 207 >gi|310829585|ref|YP_003961942.1| ribosomal protein L3 [Eubacterium limosum KIST612] gi|308741319|gb|ADO38979.1| ribosomal protein L3 [Eubacterium limosum KIST612] Length = 209 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 82/212 (38%), Positives = 118/212 (55%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT ++ G +PVTV+ C VV + +D +GY AVQ+ G+ K K Sbjct: 1 MKKAIIGKKIGMTQIFTENGTVVPVTVVEAGPCVVVQKKNMDVDGYEAVQLAYGDVKEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G + V KK + EF++ D D G V F G VD++G + GKGF Sbjct: 61 VTKPLKGHYDKHGVEYKKVIREFKLD-DYDAFETGQVIKADMFEAGDKVDISGKSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HRS GS G P RV K K + G+MG VT NLEVV Sbjct: 120 QGVIKRHGQSRGPMAHG-SKYHRSPGSMGASAYPARVMKGKNLPGQMGNKNVTALNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V + ++L+KG VPG + S + ++ S K+ Sbjct: 179 QVSAEDNILLIKGAVPGP-RGSLVSIKSSVKA 209 >gi|226939186|ref|YP_002794257.1| 50S ribosomal protein L3 [Laribacter hongkongensis HLHK9] gi|254803677|sp|C1DAR7|RL3_LARHH RecName: Full=50S ribosomal protein L3 gi|226714110|gb|ACO73248.1| RplC [Laribacter hongkongensis HLHK9] Length = 214 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 98/215 (45%), Positives = 131/215 (60%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V+ +G+ IPVTVL + +V +T D +GY AVQV G K Sbjct: 1 MSLGLVGRKVGMTRVFAEDGQSIPVTVLDMSANRVTQIKTADTDGYNAVQVAYGSKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V K G F+ V + L EF L VG + F VGQLVDVTG + GKG Sbjct: 61 VLKAEAGHFAKAGVEAGRGLKEFTADAAKLAELKVGDTLTVELFQVGQLVDVTGTSQGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNF RA+HG S++ R+ GS G QDPGRVF K+MAG+ G + TV++LEV Sbjct: 121 FSGVIKRHNFSSNRASHGNSVTTRAPGSIGQAQDPGRVFPGKRMAGQYGNVKRTVQSLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 V +D +R L+L+KG VPG+K N +++ + K+ Sbjct: 181 VRIDAERQLLLIKGSVPGSKGNDVVVL-PAVKAGA 214 >gi|78064924|ref|YP_367693.1| 50S ribosomal protein L3 [Burkholderia sp. 383] gi|109893416|sp|Q39KG7|RL3_BURS3 RecName: Full=50S ribosomal protein L3 gi|77965669|gb|ABB07049.1| LSU ribosomal protein L3P [Burkholderia sp. 383] Length = 217 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 96/212 (45%), Positives = 129/212 (60%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 2 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR+ L G+V F VGQ VDV G++IGKG Sbjct: 62 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGVDLFEVGQKVDVQGVSIGKG 121 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RATHG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 122 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 181 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D +R L+LVKG +PGA K + V + K Sbjct: 182 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVK 212 >gi|297192703|ref|ZP_06910101.1| 50S ribosomal protein L3 [Streptomyces pristinaespiralis ATCC 25486] gi|197721642|gb|EDY65550.1| 50S ribosomal protein L3 [Streptomyces pristinaespiralis ATCC 25486] Length = 214 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 98/211 (46%), Positives = 128/211 (60%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGMT V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+ Sbjct: 6 KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDIDGYESVQIAFGEIDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 66 KPLKGHFAKADVTPRRHLVELR-TPDASEYTLGQEITAEVFESGVKVDVTGKSKGKGFAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+L+KG VPG +LVR + K A Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214 >gi|228989319|ref|ZP_04149310.1| 50S ribosomal protein L3 [Bacillus pseudomycoides DSM 12442] gi|228995501|ref|ZP_04155169.1| 50S ribosomal protein L3 [Bacillus mycoides Rock3-17] gi|229003126|ref|ZP_04160972.1| 50S ribosomal protein L3 [Bacillus mycoides Rock1-4] gi|228758089|gb|EEM07288.1| 50S ribosomal protein L3 [Bacillus mycoides Rock1-4] gi|228764230|gb|EEM13109.1| 50S ribosomal protein L3 [Bacillus mycoides Rock3-17] gi|228770397|gb|EEM18970.1| 50S ribosomal protein L3 [Bacillus pseudomycoides DSM 12442] Length = 210 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 94/211 (44%), Positives = 132/211 (62%), Gaps = 4/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGELIPVTVIAATPNVVLQKKTTETDGYNAIQLGFDDKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + + +PK+ + E R D D L VG FT G++VDVTG++ GKGF Sbjct: 61 TNKPEQGHTAKASTTPKRFIREIR-DADVDGLEVGQEVKVEVFTAGEIVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH +HG S HR GS G P RVFK KK+AGRMGG++VT++NLE+V Sbjct: 120 QGVIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L+LVKG VPGAKK S ++V+ + K Sbjct: 178 QVDAERNLLLVKGNVPGAKK-SLVVVQGAVK 207 >gi|288904273|ref|YP_003429494.1| ribosomal protein L3 [Streptococcus gallolyticus UCN34] gi|306830302|ref|ZP_07463473.1| 50S ribosomal protein L3 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|320548055|ref|ZP_08042335.1| 50S ribosomal protein L3 [Streptococcus equinus ATCC 9812] gi|325977252|ref|YP_004286968.1| 50S ribosomal protein L3 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288730998|emb|CBI12542.1| ribosomal protein L3 [Streptococcus gallolyticus UCN34] gi|304427549|gb|EFM30650.1| 50S ribosomal protein L3 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|320447297|gb|EFW88060.1| 50S ribosomal protein L3 [Streptococcus equinus ATCC 9812] gi|325177180|emb|CBZ47224.1| 50S ribosomal protein L3 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 208 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 93/213 (43%), Positives = 130/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGQEITVDTFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLEVV Sbjct: 118 QGVIKRHGQARGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207 >gi|222056705|ref|YP_002539067.1| ribosomal protein L3 [Geobacter sp. FRC-32] gi|254803674|sp|B9M6U5|RL3_GEOSF RecName: Full=50S ribosomal protein L3 gi|221565994|gb|ACM21966.1| ribosomal protein L3 [Geobacter sp. FRC-32] Length = 211 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 89/212 (41%), Positives = 123/212 (58%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ +GRRIPVTV+ C V+ +T +K+GY A+QVG + Sbjct: 1 MNKGLIGKKIGMTQIFADDGRRIPVTVVEAGPCVVIQKKTKEKDGYNAIQVGFDAKEAAK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + G + E RV D VG V + F G ++DVTG +IGKGF Sbjct: 61 ANSATVGHCKAAGSGAFSFFRELRVDNVDS-YNVGDVLNADLFAAGDVIDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR F G R++HG S HR+ GS GC P RVFKNKKM G++G RVTV+ L+VV Sbjct: 120 QGVIKRWGFKGGRSSHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQLGNERVTVQRLKVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD LILV G +PG+ N + ++DS K+ Sbjct: 179 RVDAADNLILVGGAIPGS-TNGLVFIKDSVKA 209 >gi|297201729|ref|ZP_06919126.1| 50S ribosomal protein L3 [Streptomyces sviceus ATCC 29083] gi|197710896|gb|EDY54930.1| 50S ribosomal protein L3 [Streptomyces sviceus ATCC 29083] Length = 214 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 96/211 (45%), Positives = 127/211 (60%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ GE + V+ Sbjct: 6 KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDADGYESVQIAFGEIDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 66 KPLKGHFAKADVTPRRHLVEIR-TADASEYTLGQEITAEVFEAGIKVDVTGKSKGKGFAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+L+KG VPG +LVR + K A Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214 >gi|116628598|ref|YP_821217.1| 50S ribosomal protein L3 [Streptococcus thermophilus LMD-9] gi|122266808|sp|Q03IF1|RL3_STRTD RecName: Full=50S ribosomal protein L3 gi|116101875|gb|ABJ67021.1| LSU ribosomal protein L3P [Streptococcus thermophilus LMD-9] gi|312279259|gb|ADQ63916.1| 50S ribosomal protein L3 [Streptococcus thermophilus ND03] Length = 208 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VGS + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSEITVDIFEAGDIVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKTA 207 >gi|29831469|ref|NP_826103.1| 50S ribosomal protein L3 [Streptomyces avermitilis MA-4680] gi|42559612|sp|Q82DP5|RL3_STRAW RecName: Full=50S ribosomal protein L3 gi|29608584|dbj|BAC72638.1| putative ribosomal protein L3 [Streptomyces avermitilis MA-4680] Length = 214 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 96/211 (45%), Positives = 127/211 (60%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ GE + V+ Sbjct: 6 KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDSDGYESVQIAFGEIDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 66 KPLKGHFAKADVTPRRHLVEIR-TADASEYTLGQEITAETFEAGVKVDVTGKSKGKGFAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+L+KG VPG +LVR + K A Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214 >gi|261364855|ref|ZP_05977738.1| 50S ribosomal protein L3 [Neisseria mucosa ATCC 25996] gi|261378041|ref|ZP_05982614.1| 50S ribosomal protein L3 [Neisseria cinerea ATCC 14685] gi|298370591|ref|ZP_06981906.1| 50S ribosomal protein L3 [Neisseria sp. oral taxon 014 str. F0314] gi|269145491|gb|EEZ71909.1| 50S ribosomal protein L3 [Neisseria cinerea ATCC 14685] gi|288566904|gb|EFC88464.1| 50S ribosomal protein L3 [Neisseria mucosa ATCC 25996] gi|298281201|gb|EFI22691.1| 50S ribosomal protein L3 [Neisseria sp. oral taxon 014 str. F0314] Length = 214 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDADGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPGA NS ++VR S K Sbjct: 181 VRVDAERQLLLVKGAVPGAV-NSDVVVRPSVK 211 >gi|154507864|ref|ZP_02043506.1| hypothetical protein ACTODO_00346 [Actinomyces odontolyticus ATCC 17982] gi|153797498|gb|EDN79918.1| hypothetical protein ACTODO_00346 [Actinomyces odontolyticus ATCC 17982] Length = 221 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 93/211 (44%), Positives = 133/211 (63%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 ++ RKLGMT V++ +G +P+TV+ + V RT + +GY A+Q+G GE + V+ Sbjct: 13 KALLGRKLGMTQVWDADGHLVPLTVVQVGTNVVTQVRTDEVDGYSAIQLGFGEIDSRKVT 72 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F V+P++ L E R + D +G + F G+ VDV+G T GKGF+G Sbjct: 73 KPLQGHFEKAGVAPRRHLVEVRTSEHDS-YELGQELDATTFEAGEGVDVSGTTKGKGFAG 131 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G PGR+FK +MAGRMGGNR TV+NL + +V Sbjct: 132 VMKRHGFAGVSASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGGNRRTVQNLTIQAV 191 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+L+ G +PG KN +LVR S K A Sbjct: 192 DAEKGLLLISGAIPGP-KNGVVLVRSSVKGA 221 >gi|291518045|emb|CBK73266.1| LSU ribosomal protein L3P [Butyrivibrio fibrisolvens 16/4] Length = 227 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 94/229 (41%), Positives = 122/229 (53%), Gaps = 19/229 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT V+N G IPVTVL C V +T++ +GY AVQVG + KVK Sbjct: 1 MKKAILATKVGMTQVFNEGGELIPVTVLSAGPCVVTQIKTVENDGYDAVQVGFVDKKVKL 60 Query: 61 VSK----------------PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V+K P +G F V PK+ + EFR D + F Sbjct: 61 VNKDANGRKEIIHRNGVNKPEKGHFDKAGVEPKRFVREFRFDNCAD-YALAQEIKADIFE 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G VD T + GKGF GA+KR HG S HR GS G P RVFK K M Sbjct: 120 AGDKVDATATSKGKGFQGAIKRLGQHRGPMAHG-SKFHRHQGSNGACSSPSRVFKGKGMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 G+MGG RVT++NLE+V VD + L+LVKG VPG KK S + +++S K+ Sbjct: 179 GQMGGTRVTIQNLEIVRVDVENNLLLVKGAVPGPKK-SLVTIKESVKAG 226 >gi|300775014|ref|ZP_07084877.1| 50S ribosomal protein L3 [Chryseobacterium gleum ATCC 35910] gi|300506829|gb|EFK37964.1| 50S ribosomal protein L3 [Chryseobacterium gleum ATCC 35910] Length = 208 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 99/206 (48%), Positives = 136/206 (66%), Gaps = 3/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT ++N EG+ IP TV+ C V+ RTL+K+GY AVQ+G + KNV Sbjct: 2 SGIIGKKIGMTSLFNEEGKNIPCTVIQAGPCSVLQVRTLEKDGYKAVQLGFDDKSEKNVG 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K + G F +PK KL EF ++ D + VG F G+ VDVTG + GKGF G Sbjct: 62 KALAGHFKKAGSAPKAKLVEFY-REFVDEVKVGEEVKVDLFAEGEYVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG ++ATHG R+ GS G DP RVFK +MAGRMGG +VTV+NL+V+ Sbjct: 121 VVKRHGFGGVMQATHGQHNRLRAPGSIGAGSDPSRVFKGMRMAGRMGGKQVTVQNLQVLK 180 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 VD ++ L++VKG VPGA KNS++++R Sbjct: 181 VDQEQNLLVVKGAVPGA-KNSYVIIR 205 >gi|195977208|ref|YP_002122452.1| 50S ribosomal protein L3 [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225867665|ref|YP_002743613.1| 50S ribosomal protein L3 [Streptococcus equi subsp. zooepidemicus] gi|226730570|sp|B4U500|RL3_STREM RecName: Full=50S ribosomal protein L3 gi|259709735|sp|C0MCB0|RL3_STRS7 RecName: Full=50S ribosomal protein L3 gi|195973913|gb|ACG61439.1| 50S ribosomal protein L3 [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225700941|emb|CAW97644.1| 50S ribosomal protein L3 [Streptococcus equi subsp. zooepidemicus] Length = 208 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 91/213 (42%), Positives = 131/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAIQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDIFAAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207 >gi|291451913|ref|ZP_06591303.1| 50S ribosomal protein L3 [Streptomyces albus J1074] gi|291354862|gb|EFE81764.1| 50S ribosomal protein L3 [Streptomyces albus J1074] Length = 214 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 97/211 (45%), Positives = 127/211 (60%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ R +PVTV+ V RT D +GY AVQ+ GE + V+ Sbjct: 6 KGILGEKLGMTQVWDENNRVVPVTVVKAGANVVTQVRTNDTDGYEAVQIAFGEIDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 66 KPLKGHFAKADVTPRRHLVEIR-TADASEYTLGQELNADTFEAGLKVDVTGKSKGKGFAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+L+KG VPG +LVR + K A Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214 >gi|294496983|ref|YP_003560683.1| 50S ribosomal protein L3 [Bacillus megaterium QM B1551] gi|294496985|ref|YP_003560685.1| 50S ribosomal protein L3 [Bacillus megaterium QM B1551] gi|295702350|ref|YP_003595425.1| 50S ribosomal protein L3 [Bacillus megaterium DSM 319] gi|294346920|gb|ADE67249.1| 50S ribosomal protein L3 [Bacillus megaterium QM B1551] gi|294346922|gb|ADE67251.1| 50S ribosomal protein L3 [Bacillus megaterium QM B1551] gi|294800009|gb|ADF37075.1| 50S ribosomal protein L3 [Bacillus megaterium DSM 319] Length = 209 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ + + +GY A+Q+G + + K Sbjct: 1 MAKGILGRKIGMTQVFAENGDLIPVTVIEASANVVLQVKNAETDGYEAIQLGFEDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + E R D VG F G ++DVTG++ GKGF Sbjct: 61 SNKPAKGHATKANTAPKRFIRELRGV-DASAYEVGQEVKVDIFAEGDVIDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH +HG S HR GS G P RVFK K + GRMGG R+TV+NL +V Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGERITVQNLSIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGA+K S + V+ + KS Sbjct: 178 KVDAERNLLLVKGNVPGARK-SLVTVKSAVKS 208 >gi|71902709|ref|YP_279512.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS6180] gi|94987675|ref|YP_595776.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS9429] gi|94989555|ref|YP_597655.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS10270] gi|94991544|ref|YP_599643.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS2096] gi|209558627|ref|YP_002285099.1| 50S ribosomal protein L3 [Streptococcus pyogenes NZ131] gi|109893561|sp|Q48VU9|RL3_STRPM RecName: Full=50S ribosomal protein L3 gi|122986963|sp|Q1JE59|RL3_STRPB RecName: Full=50S ribosomal protein L3 gi|123382464|sp|Q1JJ62|RL3_STRPD RecName: Full=50S ribosomal protein L3 gi|123382568|sp|Q1JP17|RL3_STRPC RecName: Full=50S ribosomal protein L3 gi|226730577|sp|B5XJ36|RL3_STRPZ RecName: Full=50S ribosomal protein L3 gi|71801804|gb|AAX71157.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS6180] gi|94541183|gb|ABF31232.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS9429] gi|94543063|gb|ABF33111.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10270] gi|94545052|gb|ABF35099.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS2096] gi|209539828|gb|ACI60404.1| LSU ribosomal protein L3p (L3e) [Streptococcus pyogenes NZ131] Length = 208 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 94/213 (44%), Positives = 132/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ S F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVTV+NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207 >gi|258512670|ref|YP_003186104.1| 50S ribosomal protein L3 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479396|gb|ACV59715.1| 50S ribosomal protein L3 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 211 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 91/213 (42%), Positives = 124/213 (58%), Gaps = 4/213 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RKLGMT V+ +G +PVTV+ C V+ R LDK+GY A+Q+G + K + Sbjct: 2 KGILGRKLGMTQVFTEDGDVVPVTVIEAGPCVVLQKRVLDKDGYEAIQLGFADKKASRAT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G + +PK+ + E R + VG F G +VDVTG++ GKGF+G Sbjct: 62 KPEIGHAAKAGTAPKRYIREIRGVN-VEEYEVGQQLKADIFAPGDMVDVTGVSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHN HG S HR GS G P R FK + MAGRMGG RVTV+NLEVV V Sbjct: 121 PIKRHNQHRGPMAHG-SKYHRGVGSLGSIA-PNRTFKGQTMAGRMGGERVTVQNLEVVKV 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D ++ +IL+KG VPG +NS++ +R + K Sbjct: 179 DPEKNVILIKGSVPGP-RNSFVTIRSAVKQPAK 210 >gi|150392160|ref|YP_001322209.1| ribosomal protein L3 [Alkaliphilus metalliredigens QYMF] gi|189042829|sp|A6TWI2|RL3_ALKMQ RecName: Full=50S ribosomal protein L3 gi|149952022|gb|ABR50550.1| ribosomal protein L3 [Alkaliphilus metalliredigens QYMF] Length = 210 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 86/209 (41%), Positives = 121/209 (57%), Gaps = 3/209 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT ++N +G PVTV+ + V ++ + +GY +VQVG GE K+KN Sbjct: 2 KGLMGRKVGMTQIFNEDGIVTPVTVIEVAENVVTQIKSDETDGYNSVQVGYGEKKIKNTI 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F +PK+ + EFRV + G F G VDVTG++ GKGF G Sbjct: 62 KPLQGHFEKAGTTPKRTMKEFRVDSTEG-FTAGQELKADLFQAGDKVDVTGISKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH HG S HR GS G PGRVFK K + G MG +VT +NLE+V V Sbjct: 121 VIKRHGQSRGPMAHG-SRYHRRPGSMGASAYPGRVFKGKNLPGHMGNVQVTAQNLEIVRV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D ++ L+L+KG VPG KK + ++ + K Sbjct: 180 DLEKNLLLIKGAVPGPKKGVLV-IQTTVK 207 >gi|254670741|emb|CBA06972.1| 50S ribosomal protein L3 [Neisseria meningitidis alpha153] gi|261391678|emb|CAX49127.1| 50S ribosomal protein L3 [Neisseria meningitidis 8013] Length = 214 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG Sbjct: 61 VNKTEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPGA NS ++VR S K Sbjct: 181 VRVDAERQLLLVKGAVPGAV-NSDVVVRPSVK 211 >gi|118473190|ref|YP_885819.1| 50S ribosomal protein L3 [Mycobacterium smegmatis str. MC2 155] gi|166233163|sp|A0QSD1|RL3_MYCS2 RecName: Full=50S ribosomal protein L3 gi|118174477|gb|ABK75373.1| ribosomal protein L3 [Mycobacterium smegmatis str. MC2 155] Length = 217 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 87/214 (40%), Positives = 126/214 (58%), Gaps = 3/214 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ + +PVTV+ V RT +++GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTTERDGYSAVQLAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 KP+ G F++ V+P++ + E R+ + VG + F+ G VDVTG + GKG Sbjct: 63 IKPVAGQFAAAGVNPRRHVAELRLDDEAAVAEYEVGQELTAEIFSDGAYVDVTGTSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKRH F G A HG HR GS G PGRVFK +M+GRMG +RVT +NL+V Sbjct: 123 FAGTMKRHGFRGQGAAHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGNDRVTTQNLKV 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + G++L+KG +PG + ++VR + K Sbjct: 183 HKVDAENGVLLIKGAIPG-RNGGLVVVRSAIKRG 215 >gi|21223082|ref|NP_628861.1| 50S ribosomal protein L3 [Streptomyces coelicolor A3(2)] gi|256785823|ref|ZP_05524254.1| 50S ribosomal protein L3 [Streptomyces lividans TK24] gi|289769715|ref|ZP_06529093.1| 50S ribosomal protein L3 [Streptomyces lividans TK24] gi|42559700|sp|Q9L0E0|RL3_STRCO RecName: Full=50S ribosomal protein L3 gi|7321292|emb|CAB82070.1| 50S ribosomal protein L3 [Streptomyces coelicolor A3(2)] gi|289699914|gb|EFD67343.1| 50S ribosomal protein L3 [Streptomyces lividans TK24] Length = 214 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 92/211 (43%), Positives = 125/211 (59%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ GE + V+ Sbjct: 6 KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F+ +V+P++ L E R +G + F G VDVT + GKGF+G Sbjct: 66 KPLKGHFAKADVTPRRHLVEIR-TAAASEYTLGQEITAEAFESGVKVDVTAKSKGKGFAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF G +A+HG HR GS G PGRVFK +MAGRMG RVT +NL V +V Sbjct: 125 VMKRHNFKGGKASHGAHRVHRMPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTVHAV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+L+KG VPG +LVR + K A Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214 >gi|315925256|ref|ZP_07921470.1| 50S ribosomal protein L3 [Pseudoramibacter alactolyticus ATCC 23263] gi|315621490|gb|EFV01457.1| 50S ribosomal protein L3 [Pseudoramibacter alactolyticus ATCC 23263] Length = 211 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 86/213 (40%), Positives = 121/213 (56%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT ++ +G +PVTV+ C VV +TL+ +GY AVQ+ G+ K KN Sbjct: 1 MKKAIIGKKIGMTQIFQEDGTVVPVTVVQAGPCTVVQKKTLENDGYEAVQLAYGDIKEKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V KP++G F V + L EFR+ D L G F G VDV+G + GKG+ Sbjct: 61 VVKPVKGHFDKYGVDYARTLREFRLD-DCASLEAGQKIKADVFEAGDKVDVSGKSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GA+KR HG S HRS GS G P RV K K +AG+MG VT NLE++ Sbjct: 120 AGAIKRWGQQRGPMAHG-SKYHRSAGSMGASAYPARVPKGKHLAGQMGNKNVTALNLEII 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + L+L+KG VPG + + V+ S K+A Sbjct: 179 QVDAENNLLLIKGAVPGP-RGGVVSVKSSVKAA 210 >gi|167582623|ref|ZP_02375497.1| 50S ribosomal protein L3 [Burkholderia thailandensis TXDOH] gi|167620737|ref|ZP_02389368.1| 50S ribosomal protein L3 [Burkholderia thailandensis Bt4] Length = 219 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 99/212 (46%), Positives = 132/212 (62%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR++ D L G+V P F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVQAGEILKEFRIEADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D R L+LVKG VPGA K + V + K Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211 >gi|327438278|dbj|BAK14643.1| ribosomal protein L3 [Solibacillus silvestris StLB046] Length = 209 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 89/212 (41%), Positives = 128/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ ++++ +GY A+Q+G + +VK Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKSVETDGYEAIQLGFEDKRVKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EFR + VG F G ++DVTG+T GKGF Sbjct: 61 SNKPEQGHVAKANTAPKRFIREFR-NLEAATYEVGQEVKVEIFAEGDVIDVTGVTKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH +HG S HR GS G P RVFK KK+ G+MGG VT++NLE+V Sbjct: 120 QGVIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKQKKLPGQMGGTVVTIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPG+KK + + V+ + KS Sbjct: 178 KVDVERNLLLVKGNVPGSKK-ALVTVKTAIKS 208 >gi|29374851|ref|NP_814004.1| 50S ribosomal protein L3 [Enterococcus faecalis V583] gi|227519992|ref|ZP_03950041.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0104] gi|227555853|ref|ZP_03985900.1| 50S ribosomal protein L3 [Enterococcus faecalis HH22] gi|229546964|ref|ZP_04435689.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1322] gi|229550553|ref|ZP_04439278.1| 50S ribosomal protein L3 [Enterococcus faecalis ATCC 29200] gi|255971709|ref|ZP_05422295.1| 50S ribosomal protein L3 [Enterococcus faecalis T1] gi|255974709|ref|ZP_05425295.1| 50S ribosomal protein L3 [Enterococcus faecalis T2] gi|256618380|ref|ZP_05475226.1| 50S ribosomal protein L3 [Enterococcus faecalis ATCC 4200] gi|256762003|ref|ZP_05502583.1| 50S ribosomal protein L3 [Enterococcus faecalis T3] gi|256855163|ref|ZP_05560524.1| ribosomal protein L3 [Enterococcus faecalis T8] gi|256956862|ref|ZP_05561033.1| 50S ribosomal protein L3 [Enterococcus faecalis DS5] gi|256960669|ref|ZP_05564840.1| 50S ribosomal protein L3 [Enterococcus faecalis Merz96] gi|256964132|ref|ZP_05568303.1| 50S ribosomal protein L3 [Enterococcus faecalis HIP11704] gi|257078532|ref|ZP_05572893.1| 50S ribosomal protein L3 [Enterococcus faecalis JH1] gi|257081497|ref|ZP_05575858.1| 50S ribosomal protein L3 [Enterococcus faecalis E1Sol] gi|257084145|ref|ZP_05578506.1| 50S ribosomal protein L3 [Enterococcus faecalis Fly1] gi|257087972|ref|ZP_05582333.1| 50S ribosomal protein L3 [Enterococcus faecalis D6] gi|257088649|ref|ZP_05583010.1| 50S ribosomal protein L3 [Enterococcus faecalis CH188] gi|257417576|ref|ZP_05594570.1| 50S ribosomal protein L3 [Enterococcus faecalis AR01/DG] gi|257418699|ref|ZP_05595693.1| 50S ribosomal protein L3 [Enterococcus faecalis T11] gi|257421500|ref|ZP_05598490.1| 50S ribosomal protein L3 [Enterococcus faecalis X98] gi|293382758|ref|ZP_06628683.1| 50S ribosomal protein L3 [Enterococcus faecalis R712] gi|293388059|ref|ZP_06632587.1| 50S ribosomal protein L3 [Enterococcus faecalis S613] gi|294781051|ref|ZP_06746402.1| 50S ribosomal protein L3 [Enterococcus faecalis PC1.1] gi|300862213|ref|ZP_07108293.1| 50S ribosomal protein L3 [Enterococcus faecalis TUSoD Ef11] gi|307269087|ref|ZP_07550448.1| 50S ribosomal protein L3 [Enterococcus faecalis TX4248] gi|307274171|ref|ZP_07555379.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0855] gi|307276396|ref|ZP_07557519.1| 50S ribosomal protein L3 [Enterococcus faecalis TX2134] gi|307278606|ref|ZP_07559676.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0860] gi|307287014|ref|ZP_07567089.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0109] gi|307291645|ref|ZP_07571520.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0411] gi|312901122|ref|ZP_07760410.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0470] gi|312904684|ref|ZP_07763839.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0635] gi|312908653|ref|ZP_07767595.1| 50S ribosomal protein L3 [Enterococcus faecalis DAPTO 512] gi|312909199|ref|ZP_07768056.1| 50S ribosomal protein L3 [Enterococcus faecalis DAPTO 516] gi|312952607|ref|ZP_07771471.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0102] gi|42559615|sp|Q839G4|RL3_ENTFA RecName: Full=50S ribosomal protein L3 gi|29342309|gb|AAO80075.1| ribosomal protein L3 [Enterococcus faecalis V583] gi|227072540|gb|EEI10503.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0104] gi|227175020|gb|EEI55992.1| 50S ribosomal protein L3 [Enterococcus faecalis HH22] gi|229304272|gb|EEN70268.1| 50S ribosomal protein L3 [Enterococcus faecalis ATCC 29200] gi|229307892|gb|EEN73879.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1322] gi|255962727|gb|EET95203.1| 50S ribosomal protein L3 [Enterococcus faecalis T1] gi|255967581|gb|EET98203.1| 50S ribosomal protein L3 [Enterococcus faecalis T2] gi|256597907|gb|EEU17083.1| 50S ribosomal protein L3 [Enterococcus faecalis ATCC 4200] gi|256683254|gb|EEU22949.1| 50S ribosomal protein L3 [Enterococcus faecalis T3] gi|256709676|gb|EEU24723.1| ribosomal protein L3 [Enterococcus faecalis T8] gi|256947358|gb|EEU63990.1| 50S ribosomal protein L3 [Enterococcus faecalis DS5] gi|256951165|gb|EEU67797.1| 50S ribosomal protein L3 [Enterococcus faecalis Merz96] gi|256954628|gb|EEU71260.1| 50S ribosomal protein L3 [Enterococcus faecalis HIP11704] gi|256986562|gb|EEU73864.1| 50S ribosomal protein L3 [Enterococcus faecalis JH1] gi|256989527|gb|EEU76829.1| 50S ribosomal protein L3 [Enterococcus faecalis E1Sol] gi|256992175|gb|EEU79477.1| 50S ribosomal protein L3 [Enterococcus faecalis Fly1] gi|256996002|gb|EEU83304.1| 50S ribosomal protein L3 [Enterococcus faecalis D6] gi|256997461|gb|EEU83981.1| 50S ribosomal protein L3 [Enterococcus faecalis CH188] gi|257159404|gb|EEU89364.1| 50S ribosomal protein L3 [Enterococcus faecalis ARO1/DG] gi|257160527|gb|EEU90487.1| 50S ribosomal protein L3 [Enterococcus faecalis T11] gi|257163324|gb|EEU93284.1| 50S ribosomal protein L3 [Enterococcus faecalis X98] gi|291079918|gb|EFE17282.1| 50S ribosomal protein L3 [Enterococcus faecalis R712] gi|291082510|gb|EFE19473.1| 50S ribosomal protein L3 [Enterococcus faecalis S613] gi|294451854|gb|EFG20305.1| 50S ribosomal protein L3 [Enterococcus faecalis PC1.1] gi|295112506|emb|CBL31143.1| LSU ribosomal protein L3P [Enterococcus sp. 7L76] gi|300848738|gb|EFK76495.1| 50S ribosomal protein L3 [Enterococcus faecalis TUSoD Ef11] gi|306497264|gb|EFM66806.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0411] gi|306501960|gb|EFM71249.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0109] gi|306504666|gb|EFM73866.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0860] gi|306506876|gb|EFM76023.1| 50S ribosomal protein L3 [Enterococcus faecalis TX2134] gi|306509133|gb|EFM78195.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0855] gi|306514567|gb|EFM83121.1| 50S ribosomal protein L3 [Enterococcus faecalis TX4248] gi|310625440|gb|EFQ08723.1| 50S ribosomal protein L3 [Enterococcus faecalis DAPTO 512] gi|310629395|gb|EFQ12678.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0102] gi|310632036|gb|EFQ15319.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0635] gi|311290441|gb|EFQ68997.1| 50S ribosomal protein L3 [Enterococcus faecalis DAPTO 516] gi|311291794|gb|EFQ70350.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0470] gi|315026835|gb|EFT38767.1| 50S ribosomal protein L3 [Enterococcus faecalis TX2137] gi|315028875|gb|EFT40807.1| 50S ribosomal protein L3 [Enterococcus faecalis TX4000] gi|315031139|gb|EFT43071.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0017] gi|315036015|gb|EFT47947.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0027] gi|315145336|gb|EFT89352.1| 50S ribosomal protein L3 [Enterococcus faecalis TX2141] gi|315147171|gb|EFT91187.1| 50S ribosomal protein L3 [Enterococcus faecalis TX4244] gi|315151071|gb|EFT95087.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0012] gi|315153609|gb|EFT97625.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0031] gi|315156211|gb|EFU00228.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0043] gi|315158644|gb|EFU02661.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0312] gi|315160728|gb|EFU04745.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0645] gi|315165901|gb|EFU09918.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1302] gi|315168100|gb|EFU12117.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1341] gi|315171460|gb|EFU15477.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1342] gi|315172694|gb|EFU16711.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1346] gi|315573514|gb|EFU85705.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0309B] gi|315579326|gb|EFU91517.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0630] gi|315582138|gb|EFU94329.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0309A] gi|323479422|gb|ADX78861.1| 50S ribosomal protein L3 [Enterococcus faecalis 62] gi|327534004|gb|AEA92838.1| 50S ribosomal protein L3 [Enterococcus faecalis OG1RF] gi|329577749|gb|EGG59175.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1467] Length = 209 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 130/212 (61%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQVKTVETDGYEAIQVGYQDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF+ + VG F G +VDVTG T GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIKEFK-NVELGEYEVGKEIKVDVFQAGDVVDVTGTTKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH +HG S HR GS G P RVFKNK++AGRMGG+RVT++NLEVV Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGDRVTIQNLEVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R +IL+KG +PGAKK S I ++ + K+ Sbjct: 178 KVDVERNVILIKGNIPGAKK-SLITIKSAVKA 208 >gi|319942173|ref|ZP_08016489.1| 50S ribosomal protein L3 [Sutterella wadsworthensis 3_1_45B] gi|319804226|gb|EFW01118.1| 50S ribosomal protein L3 [Sutterella wadsworthensis 3_1_45B] Length = 214 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 100/212 (47%), Positives = 134/212 (63%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 + G+V RK+GMT ++ +G +PVTVL + N +V + +T D +GY AVQV G K V Sbjct: 4 KLGLVGRKIGMTRIFTDDGVSVPVTVLDVSNNRVTMVKTQDTDGYTAVQVAFGTKKPSRV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SKP+ G F+ V L EFR+ + G S FT GQ VDVTG TIGKGF Sbjct: 64 SKPLAGQFAKAGVEAACTLKEFRIDAEKAAEFKPGQTISVEIFTEGQKVDVTGTTIGKGF 123 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GA+KRH+F RA+HG S++ R+ GS G RQDPGRVF K+MAG +G + T +NL V Sbjct: 124 AGAIKRHHFSSNRASHGNSVTTRAPGSIGNRQDPGRVFPGKRMAGHLGDVQRTTQNLVVA 183 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LV+G VPGA K ++VR + K+ Sbjct: 184 RVDKERQLLLVRGAVPGA-KGGEVIVRPAVKA 214 >gi|313667441|ref|YP_004047725.1| 50S ribosomal protein L3 [Neisseria lactamica ST-640] gi|313004903|emb|CBN86329.1| 50S ribosomal protein L3 [Neisseria lactamica 020-06] Length = 214 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDD-LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLIEFALTEEKPVELKAGDEITVSMFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPGA NS ++VR S K Sbjct: 181 VRVDAERQLLLVKGAVPGAV-NSDVVVRPSVK 211 >gi|329298533|ref|ZP_08255869.1| 50S ribosomal protein L3 [Plautia stali symbiont] Length = 208 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 129/210 (61%), Gaps = 3/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ EG IPVTV+ ++ +V + L+ +GY A+QV G K V Sbjct: 2 IGLVGKKVGMTRIFTEEGVSIPVTVIEVEANRVTQVKGLENDGYQAIQVTTGAKKANRVG 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR + + VG S F + VDVTG + GKGF G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRTEG--EEYSVGQSISVEIFADVKKVDVTGTSKGKGFVG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++LE+V V Sbjct: 120 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLEIVRV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+LVKG VPGA S + V+ + K+ Sbjct: 180 DAERNLLLVKGAVPGA-TGSDLFVKPAVKA 208 >gi|261400052|ref|ZP_05986177.1| 50S ribosomal protein L3 [Neisseria lactamica ATCC 23970] gi|269210278|gb|EEZ76733.1| 50S ribosomal protein L3 [Neisseria lactamica ATCC 23970] Length = 214 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 105/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPGA NS I+VR S K Sbjct: 181 VRVDAERQLLLVKGAVPGAV-NSNIVVRPSVK 211 >gi|315649699|ref|ZP_07902783.1| 50S ribosomal protein L3 [Paenibacillus vortex V453] gi|315274887|gb|EFU38263.1| 50S ribosomal protein L3 [Paenibacillus vortex V453] Length = 207 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 85/210 (40%), Positives = 118/210 (56%), Gaps = 4/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RKLGMT V+ EG IPVTV+ C V+ + L+ +GY A+QVG + K + Sbjct: 2 KGILGRKLGMTQVFTPEGIVIPVTVIEAGPCVVLQKKDLENDGYEAIQVGFSDKKENRSN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G N +PK+ + E R D + VG F G+ VDVTG++ GKGF G Sbjct: 62 KPEAGHAKKANTAPKRYVREIRGV-DLASVEVGQELKADVFAEGEFVDVTGISKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR +HG S HR GS G Q RV K K++ G MG VT++ LEVV V Sbjct: 121 VIKRWGQSRGPMSHG-SRYHRRPGSMGSIQ-ANRVPKGKRLPGHMGNETVTIQKLEVVRV 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R +ILVKG +PG KK ++ ++++ K Sbjct: 179 DAERNVILVKGSIPGPKKG-FVQIKETVKK 207 >gi|19745241|ref|NP_606377.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS8232] gi|21909576|ref|NP_663844.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS315] gi|28894954|ref|NP_801304.1| 50S ribosomal protein L3 [Streptococcus pyogenes SSI-1] gi|71909858|ref|YP_281408.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS5005] gi|139472927|ref|YP_001127642.1| 50S ribosomal protein L3 [Streptococcus pyogenes str. Manfredo] gi|251781515|ref|YP_002995816.1| 50S ribosomal protein L3 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|306828260|ref|ZP_07461520.1| 50S ribosomal protein L3 [Streptococcus pyogenes ATCC 10782] gi|42559572|sp|P60451|RL3_STRP3 RecName: Full=50S ribosomal protein L3 gi|42559573|sp|P60452|RL3_STRP8 RecName: Full=50S ribosomal protein L3 gi|166234599|sp|A2RC14|RL3_STRPG RecName: Full=50S ribosomal protein L3 gi|19747335|gb|AAL96876.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS8232] gi|21903757|gb|AAM78647.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS315] gi|28810199|dbj|BAC63137.1| 50S ribosomal protein L3 [Streptococcus pyogenes SSI-1] gi|71852640|gb|AAZ50663.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS5005] gi|134271173|emb|CAM29386.1| 50S ribosomal protein L3 [Streptococcus pyogenes str. Manfredo] gi|242390143|dbj|BAH80602.1| 50S ribosomal protein L3 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|304429571|gb|EFM32620.1| 50S ribosomal protein L3 [Streptococcus pyogenes ATCC 10782] gi|323126311|gb|ADX23608.1| 50S ribosomal protein L3 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 208 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 95/213 (44%), Positives = 132/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ S F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVTV+NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +ILVKG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILVKGNVPGAKK-SLITIKSAVKAA 207 >gi|254470259|ref|ZP_05083663.1| ribosomal protein L3 [Pseudovibrio sp. JE062] gi|211960570|gb|EEA95766.1| ribosomal protein L3 [Pseudovibrio sp. JE062] Length = 227 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 125/209 (59%), Positives = 157/209 (75%), Gaps = 2/209 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT +YN G +PVTVL LDNCQVV HRT +KNGY A+Q+G G AKVKN ++ MRG F+ Sbjct: 1 MTRIYNEAGEHVPVTVLRLDNCQVVAHRTAEKNGYTALQLGVGAAKVKNTNRAMRGHFAV 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 V PK+KL EFRV ++ +++ VG+ + +F GQ VDVTG +IGKGF+GAMKRHNFGG Sbjct: 61 AKVEPKRKLAEFRVSEE-NMIEVGAELTADHFLNGQFVDVTGTSIGKGFAGAMKRHNFGG 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 RA+HGVSISHR+HGSTG QDPG+VFK KKMAG +G RVT +NL+VV D +RGLI+V Sbjct: 120 GRASHGVSISHRAHGSTGQCQDPGKVFKGKKMAGHLGAERVTTQNLKVVRTDVERGLIMV 179 Query: 192 KGCVPGAKKNSWILVRDSFKSAVNCKGKV 220 +G VPG+ K WILVRD+ K ++ V Sbjct: 180 EGSVPGS-KGGWILVRDAIKKSLPENAPV 207 >gi|239997926|ref|ZP_04717850.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae 35/02] gi|240017545|ref|ZP_04724085.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae FA6140] gi|240113966|ref|ZP_04728456.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae MS11] gi|240116700|ref|ZP_04730762.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID18] gi|240118922|ref|ZP_04732984.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID1] gi|240124671|ref|ZP_04737557.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-92-679] gi|254494721|ref|ZP_05107892.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae 1291] gi|268593776|ref|ZP_06127943.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae 35/02] gi|268600030|ref|ZP_06134197.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae MS11] gi|268602368|ref|ZP_06136535.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID18] gi|268604631|ref|ZP_06138798.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID1] gi|268683245|ref|ZP_06150107.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-92-679] gi|226513761|gb|EEH63106.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae 1291] gi|268547165|gb|EEZ42583.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae 35/02] gi|268584161|gb|EEZ48837.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae MS11] gi|268586499|gb|EEZ51175.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID18] gi|268588762|gb|EEZ53438.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID1] gi|268623529|gb|EEZ55929.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-92-679] Length = 214 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGVAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPGA NS ++VR S K Sbjct: 181 VRVDAERQLLLVKGAVPGAV-NSDVVVRPSVK 211 >gi|313889584|ref|ZP_07823229.1| 50S ribosomal protein L3 [Streptococcus pseudoporcinus SPIN 20026] gi|313122093|gb|EFR45187.1| 50S ribosomal protein L3 [Streptococcus pseudoporcinus SPIN 20026] Length = 208 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 92/213 (43%), Positives = 131/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207 >gi|293190259|ref|ZP_06608755.1| 50S ribosomal protein L3 [Actinomyces odontolyticus F0309] gi|292821075|gb|EFF80028.1| 50S ribosomal protein L3 [Actinomyces odontolyticus F0309] Length = 221 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 93/211 (44%), Positives = 133/211 (63%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 ++ RKLGMT V++ +G +P+TV+ + V RT + +GY A+Q+G GE + V+ Sbjct: 13 KALLGRKLGMTQVWDADGHLVPLTVVQVGTNVVTQVRTDEVDGYSAIQLGFGEIDSRKVT 72 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F V+P++ L E R + D +G + F G+ VDV+G T GKGF+G Sbjct: 73 KPLQGHFEKAGVAPRRHLVEVRTSEQDSF-ELGQELDATTFEAGEGVDVSGTTKGKGFAG 131 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G PGR+FK +MAGRMGGNR TV+NL + +V Sbjct: 132 VMKRHGFAGVSASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGGNRRTVQNLTIQAV 191 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+L+ G +PG KN +LVR S K A Sbjct: 192 DAEKGLLLISGAIPGP-KNGVVLVRSSVKGA 221 >gi|239918199|ref|YP_002957757.1| LSU ribosomal protein L3P [Micrococcus luteus NCTC 2665] gi|281415610|ref|ZP_06247352.1| 50S ribosomal protein L3 [Micrococcus luteus NCTC 2665] gi|239839406|gb|ACS31203.1| LSU ribosomal protein L3P [Micrococcus luteus NCTC 2665] Length = 216 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 90/211 (42%), Positives = 124/211 (58%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ + + IPVTV+ D V R+ + +GY AVQ+ G+ + V+ Sbjct: 8 KGLLGTKLGMTQVWDEDNKLIPVTVVKADPNVVTQLRSEETDGYTAVQIAYGQIDPRRVT 67 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F V+P++ L E R D +G + F GQ VDV G T GKGF+G Sbjct: 68 KPLAGHFEKAGVTPRRHLVELR-TADAAEYSLGQDVTVEVFEAGQKVDVVGTTKGKGFAG 126 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRH F G+ A+HG +HR GS G PGRVFK ++M GRMG R T NL + + Sbjct: 127 AMKRHGFAGVGASHGAHKNHRKPGSVGGASTPGRVFKGQRMPGRMGAVRQTTMNLTLHGI 186 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + L+L+KG VPG+ K +LVR + K A Sbjct: 187 DVENNLLLIKGAVPGS-KGQVVLVRSAVKGA 216 >gi|295838404|ref|ZP_06825337.1| 50S ribosomal protein L3 [Streptomyces sp. SPB74] gi|302519661|ref|ZP_07272003.1| 50S ribosomal protein L3 [Streptomyces sp. SPB78] gi|318058128|ref|ZP_07976851.1| 50S ribosomal protein L3 [Streptomyces sp. SA3_actG] gi|318076019|ref|ZP_07983351.1| 50S ribosomal protein L3 [Streptomyces sp. SA3_actF] gi|197695799|gb|EDY42732.1| 50S ribosomal protein L3 [Streptomyces sp. SPB74] gi|302428556|gb|EFL00372.1| 50S ribosomal protein L3 [Streptomyces sp. SPB78] Length = 214 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 97/211 (45%), Positives = 128/211 (60%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+ Sbjct: 6 KGILGEKLGMTQVWDDNNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 66 KPLKGHFAKADVTPRRHLVEIRTS-DSSEYTLGQEVTAETFESGVKVDVTGKSKGKGFAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+L+KG VPG +LVR + K A Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214 >gi|24380367|ref|NP_722322.1| 50S ribosomal protein L3 [Streptococcus mutans UA159] gi|42559636|sp|Q8DS16|RL3_STRMU RecName: Full=50S ribosomal protein L3 gi|24378386|gb|AAN59628.1|AE015024_20 50S ribosomal protein L3 [Streptococcus mutans UA159] Length = 208 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 94/213 (44%), Positives = 131/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + + +PK+ + EF K+ + L VG + F G +VDVTG T GKGF Sbjct: 61 SNKPAKGHVAKADTAPKRFIREF---KNIEGLEVGQEITVEQFEAGDVVDVTGTTKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G P RVFK K +AGRMGGNRVTV+NLEVV Sbjct: 118 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGNRVTVQNLEVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I+++ + K+A Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLIIIKSAVKAA 207 >gi|299541932|ref|ZP_07052255.1| 50S ribosomal protein L3 [Lysinibacillus fusiformis ZC1] gi|298725670|gb|EFI66311.1| 50S ribosomal protein L3 [Lysinibacillus fusiformis ZC1] Length = 209 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 128/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+QVG + +VK Sbjct: 1 MAKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTVETDGYEAIQVGFEDKRVKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EFR + + VG F G ++DVTG+T GKGF Sbjct: 61 SNKPEQGHVAKANTAPKRFIREFR-NVNVEEYEVGQEVKVEIFAEGDVIDVTGVTKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFK KK+ G+MGGN VT++NLE+V Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKQKKLPGQMGGNVVTIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD R L+LVKG VPG+KK + + V+ + K+ Sbjct: 178 KVDTDRNLLLVKGNVPGSKK-ALVTVKTAIKA 208 >gi|261380559|ref|ZP_05985132.1| 50S ribosomal protein L3 [Neisseria subflava NJ9703] gi|284796527|gb|EFC51874.1| 50S ribosomal protein L3 [Neisseria subflava NJ9703] Length = 214 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 104/212 (49%), Positives = 136/212 (64%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ +V + L EF + ++ L VG + S F VGQLVDVTG + GKG Sbjct: 61 VNKTEAGHFAKASVEAGRGLVEFALTEEKLAELKVGDEITVSMFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPG+ NS ++VR S K Sbjct: 181 VRVDAERQLLLVKGAVPGSV-NSDVVVRPSVK 211 >gi|299135257|ref|ZP_07028448.1| 50S ribosomal protein L3 [Afipia sp. 1NLS2] gi|298590234|gb|EFI50438.1| 50S ribosomal protein L3 [Afipia sp. 1NLS2] Length = 243 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 127/218 (58%), Positives = 157/218 (72%), Gaps = 2/218 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G IPVTVL L NCQVV HRT DKNGY A+Q+G+G K Sbjct: 1 MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLGNCQVVGHRTKDKNGYTALQLGSGARKSVY 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + K RG F+ V PK+K+ EFRV DD ++PVG+ + +F GQ VDVTG ++GKGF Sbjct: 61 MPKAERGQFAVAKVEPKRKVVEFRVS-DDAVIPVGAEITADHFVAGQFVDVTGTSVGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T NL VV Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 D +RGL+LV+G VPG+ K WI VRD+ K + + Sbjct: 180 QTDVERGLLLVEGAVPGS-KGGWITVRDAVKKPLPKEA 216 >gi|322390660|ref|ZP_08064174.1| 50S ribosomal protein L3 [Streptococcus parasanguinis ATCC 903] gi|321142633|gb|EFX38097.1| 50S ribosomal protein L3 [Streptococcus parasanguinis ATCC 903] Length = 208 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 89/213 (41%), Positives = 128/213 (60%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNVEGLEVGDEITVDTFEAGDIVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFK K +AGRMGG+RVT++NLEVV Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+ Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAG 207 >gi|317131369|ref|YP_004090683.1| 50S ribosomal protein L3 [Ethanoligenens harbinense YUAN-3] gi|315469348|gb|ADU25952.1| 50S ribosomal protein L3 [Ethanoligenens harbinense YUAN-3] Length = 211 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 89/213 (41%), Positives = 128/213 (60%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +K+GMT +++ G IPVTV+ C VV +T++ +GY +VQ+G E + K Sbjct: 1 MQKGIIGKKIGMTQLFDERGNVIPVTVIEAGPCVVVQKKTVEVDGYESVQLGFEEVREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G F V+ K+ L EFR+ +D L VG + F G VDV G + GKG+ Sbjct: 61 LNKPEKGHFEKAGVASKRVLREFRL-EDMSALNVGDIVKADVFAAGDRVDVAGTSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR L+ THG HR GS G + RV K KKMAG+MG RVTV+NL+VV Sbjct: 120 AGVIKRWGHHRLKMTHGTGPVHREVGSMGASTNMSRVPKGKKMAGQMGNERVTVQNLDVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + LI +KG +PG K +++ DS K A Sbjct: 180 KVDAENNLIALKGAIPGP-KGGIVILADSVKKA 211 >gi|328955914|ref|YP_004373247.1| LSU ribosomal protein L3P [Coriobacterium glomerans PW2] gi|328456238|gb|AEB07432.1| LSU ribosomal protein L3P [Coriobacterium glomerans PW2] Length = 206 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 88/209 (42%), Positives = 119/209 (56%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M S ++ RK+GMT V++ +PVTV+ C V +T +GY AVQ+G G+ + K+ Sbjct: 1 MVSMILGRKIGMTQVWDENDNVVPVTVIQAGPCYVSQVKTEATDGYDAVQIGFGDIRAKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++PM G F+ V P + L E RV + VG + + F + VDV G + GKGF Sbjct: 61 VNRPMAGHFAKAGVEPVRYLREVRV-PAGEQHSVGDPVTVADFEGTEKVDVIGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR THG HR GS G P RV K KMAG MG +RVTVKNL VV Sbjct: 120 QGRIKRWGQHRGPMTHGSH-FHRHPGSIGQCAYPSRVLKGLKMAGHMGNDRVTVKNLSVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +D ++ LILVKG VPGA K+ + +R + Sbjct: 179 RIDAEQNLILVKGAVPGA-KSGLVCIRMA 206 >gi|171060669|ref|YP_001793018.1| 50S ribosomal protein L3 [Leptothrix cholodnii SP-6] gi|212288405|sp|B1Y8I7|RL3_LEPCP RecName: Full=50S ribosomal protein L3 gi|170778114|gb|ACB36253.1| ribosomal protein L3 [Leptothrix cholodnii SP-6] Length = 226 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 97/215 (45%), Positives = 130/215 (60%), Gaps = 2/215 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ RK+GM ++ +G +PVTVL + N +V +T++ +GY AVQV G K V Sbjct: 9 RLGLLGRKVGMMRIFTDDGDAVPVTVLDVSNNRVAQIKTVETDGYSAVQVAFGARKASRV 68 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLL-PVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G + V + L EFRV + GS + F GQ VDV G TIGKGF Sbjct: 69 TKPEAGHLAKAGVESGELLQEFRVSAEVAAECKPGSQLPIAMFQAGQQVDVQGTTIGKGF 128 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH+FG RA+HG S SH GS QDPGRVF KKM+G +G + VT +NL+VV Sbjct: 129 AGTIKRHHFGSQRASHGNSRSHNVPGSISMAQDPGRVFPGKKMSGHLGDDTVTTQNLDVV 188 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 VD+ R L+LVKG VPGA K ++ VR + K + Sbjct: 189 RVDEARQLLLVKGAVPGA-KGGFVTVRPAVKVKLK 222 >gi|293375389|ref|ZP_06621670.1| 50S ribosomal protein L3 [Turicibacter sanguinis PC909] gi|325844417|ref|ZP_08168144.1| 50S ribosomal protein L3 [Turicibacter sp. HGF1] gi|292645942|gb|EFF63971.1| 50S ribosomal protein L3 [Turicibacter sanguinis PC909] gi|325489091|gb|EGC91475.1| 50S ribosomal protein L3 [Turicibacter sp. HGF1] Length = 209 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 124/212 (58%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT +++ EG+ IPVTV+ V+ +T + +GY AVQVG + K Sbjct: 1 MAKGILGRKIGMTQIFSEEGKLIPVTVVQATPNVVLQVKTNETDGYEAVQVGFETKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G + +PK+ + EFR D VG F G++VDVTG T GKGF Sbjct: 61 ANKPEMGHVAKAETAPKRFIREFR-NLDVAEYQVGQEIKVDTFAEGEIVDVTGKTKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G RV K KK+ G+ GGN VTV+NLE+V Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGSIA-ANRVLKGKKLPGQTGGNIVTVQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R ++L+KG VPGAKK S ++VR + K+ Sbjct: 178 KVDTERNVLLIKGNVPGAKK-SLVMVRSAVKA 208 >gi|302876534|ref|YP_003845167.1| 50S ribosomal protein L3 [Clostridium cellulovorans 743B] gi|307687207|ref|ZP_07629653.1| 50S ribosomal protein L3 [Clostridium cellulovorans 743B] gi|302579391|gb|ADL53403.1| 50S ribosomal protein L3 [Clostridium cellulovorans 743B] Length = 209 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 82/212 (38%), Positives = 125/212 (58%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT +++ + IPVTV+ C V+ +T+DK+GY A+QVG G+ + Sbjct: 1 MKKAILGKKIGMTQIFDENRKLIPVTVVEAGPCVVIQKKTIDKDGYEAIQVGFGDKRENL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KPM+G F++ V K+ + E R+ +D V F F G+ VDV+G++ GKGF Sbjct: 61 FNKPMKGHFAAAGVPVKRYVKELRL-EDVSGYNVKDEFKVDIFEAGEKVDVSGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR +HG S HR+ GS G DP R FKNKK+ G MG TV NL V Sbjct: 120 QGTIKRWGAHRGPMSHG-SKFHRAPGSMGASSDPSRTFKNKKLPGHMGAKNTTVMNLTVA 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V + +IL+KG VPG K ++++R++ K+ Sbjct: 179 KVMVDKNIILIKGAVPGPNKG-FVVIRNAVKA 209 >gi|92117098|ref|YP_576827.1| 50S ribosomal protein L3 [Nitrobacter hamburgensis X14] gi|123083705|sp|Q1QN30|RL3_NITHX RecName: Full=50S ribosomal protein L3 gi|91799992|gb|ABE62367.1| LSU ribosomal protein L3P [Nitrobacter hamburgensis X14] Length = 241 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 128/215 (59%), Positives = 157/215 (73%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G IPVTVL L NCQV+ HRT +KNGY+A+Q+G+G K Sbjct: 1 MRSGVIAQKVGMTRVFTDAGEHIPVTVLRLSNCQVLGHRTSEKNGYVALQLGSGARKTVY 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + K RG F+ V PK+K+ EFRV +D L+PVG+ +F VGQ VDVTG ++GKGF Sbjct: 61 LPKAERGQFAVAKVEPKRKVAEFRVSED-SLIPVGAEIQADHFVVGQFVDVTGTSVGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +RVT NL VV Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRVTTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D +RGLILV+G VPG+ K WI VRD+ K + Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWIAVRDAVKKPLP 213 >gi|294630893|ref|ZP_06709453.1| 50S ribosomal protein L3 [Streptomyces sp. e14] gi|292834226|gb|EFF92575.1| 50S ribosomal protein L3 [Streptomyces sp. e14] Length = 214 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 97/211 (45%), Positives = 128/211 (60%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ GE + V+ Sbjct: 6 KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 66 KPLKGHFAKADVTPRRHLVEIR-TADAAEYTLGQEITAEVFEAGVKVDVTGKSKGKGFAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNFGGL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V Sbjct: 125 VMKRHNFGGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+L+KG VPG +LVR + K A Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214 >gi|15674287|ref|NP_268460.1| 50S ribosomal protein L3 [Streptococcus pyogenes M1 GAS] gi|42559685|sp|Q9A1X4|RL3_STRP1 RecName: Full=50S ribosomal protein L3 gi|13621367|gb|AAK33182.1| 50S ribosomal protein L3 [Streptococcus pyogenes M1 GAS] Length = 208 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 95/213 (44%), Positives = 133/213 (62%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ S F G +VDVTG++ GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFEAGDVVDVTGISKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVTV+NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +ILVKG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILVKGNVPGAKK-SLITIKSAVKAA 207 >gi|83591276|ref|YP_431285.1| 50S ribosomal protein L3 [Moorella thermoacetica ATCC 39073] gi|109893524|sp|Q2RFP7|RL3_MOOTA RecName: Full=50S ribosomal protein L3 gi|83574190|gb|ABC20742.1| LSU ribosomal protein L3P [Moorella thermoacetica ATCC 39073] Length = 209 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 86/213 (40%), Positives = 128/213 (60%), Gaps = 4/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR G++ +K+GMT V++ GR IPVTV+ C V+ + +GY AVQVG K + Sbjct: 1 MRKGILGKKIGMTQVFDETGRAIPVTVIQAGPCVVIRKKETSTDGYDAVQVGFEPVKERK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP+ G+F+ V+P + + EFR++ VG F+ G+ VDVTG++ GKGF Sbjct: 61 VNKPLLGYFNKAGVTPFRYIREFRLEN-SGEYQVGQEIKADVFSPGEKVDVTGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH F HG S HR GS + P RVFK +++ G +G RVTV+ LEVV Sbjct: 120 AGGIKRHGFHRGPMEHG-SKYHRRPGSL-AAKGPARVFKGRRLPGHLGAVRVTVQGLEVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D +R L+L+KG VPG ++ +++++S K Sbjct: 178 RNDPERNLLLIKGSVPGP-RHGLLVIKNSVKGG 209 >gi|134298093|ref|YP_001111589.1| 50S ribosomal protein L3 [Desulfotomaculum reducens MI-1] gi|172044219|sp|A4J111|RL3_DESRM RecName: Full=50S ribosomal protein L3 gi|134050793|gb|ABO48764.1| LSU ribosomal protein L3P [Desulfotomaculum reducens MI-1] Length = 209 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 86/211 (40%), Positives = 122/211 (57%), Gaps = 4/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++N G IPVTV+ C VV RT + +GY A+Q+G G + Sbjct: 1 MPKGILGKKIGMTQIFNEAGVAIPVTVVEAGPCLVVQKRTPENDGYSAIQLGFGVKRENL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + V P + L E +V D + VG F G+ VDV G + GKGF Sbjct: 61 LNKPTKGHLNKAGVRPVRFLRELKVD-DLEAFQVGQEIKADIFAEGEKVDVVGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNF HG S HR GS+ + P R FK +K+ G G RVTV+NL+VV Sbjct: 120 AGGIKRHNFHRGPMAHG-SKYHRRPGSS-AAKGPARTFKGRKLPGHYGVERVTVQNLQVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L+ +KG VPG + +LV++S K Sbjct: 178 KVDPERNLLAIKGAVPGP-RGGLLLVKNSVK 207 >gi|75675556|ref|YP_317977.1| 50S ribosomal protein L3 [Nitrobacter winogradskyi Nb-255] gi|109893531|sp|Q3SSW6|RL3_NITWN RecName: Full=50S ribosomal protein L3 gi|74420426|gb|ABA04625.1| LSU ribosomal protein L3P [Nitrobacter winogradskyi Nb-255] Length = 247 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 127/219 (57%), Positives = 159/219 (72%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G IPVTVL L NCQV+ HRT +KNGY+A+Q+G+G K Sbjct: 1 MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLSNCQVLGHRTSEKNGYVALQLGSGARKTVY 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + K RG F+ V+PK+K+ EFRV +D L+PVG+ +F VGQ VDVTG ++GKG+ Sbjct: 61 MPKAERGQFAVAKVAPKRKVAEFRVSED-SLIPVGAEIQADHFVVGQFVDVTGTSVGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G MG +R+T NL VV Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 D +RGLILV+G VPG+ K WI VRD+ K + + Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWIAVRDAVKKPLPKEAP 217 >gi|225076395|ref|ZP_03719594.1| hypothetical protein NEIFLAOT_01440 [Neisseria flavescens NRL30031/H210] gi|224952243|gb|EEG33452.1| hypothetical protein NEIFLAOT_01440 [Neisseria flavescens NRL30031/H210] Length = 214 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 103/212 (48%), Positives = 134/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG Sbjct: 61 VNKTEAGHFAKAGVEAGRGLVEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPG+ NS ++VR S K Sbjct: 181 VRVDAERQLLLVKGAVPGSV-NSDVVVRPSVK 211 >gi|158337810|ref|YP_001518986.1| 50S ribosomal protein L3 [Acaryochloris marina MBIC11017] gi|189042827|sp|B0C1D3|RL3_ACAM1 RecName: Full=50S ribosomal protein L3 gi|158308051|gb|ABW29668.1| 50S ribosomal protein L3 [Acaryochloris marina MBIC11017] Length = 212 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 82/209 (39%), Positives = 123/209 (58%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT V++ GR IPVTV+ C V +T +GY A+Q+G G K Sbjct: 1 MSVGILGTKLGMTQVFDEAGRAIPVTVVQAGPCPVTQIKTAQTDGYTAIQIGYGSTTEKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G +P + L E+R+ D +G S F+ GQLVD++G +IG+GF Sbjct: 61 LTRPELGHLKKSGSTPVRHLQEYRL-ADVSEYELGQSISADLFSEGQLVDISGTSIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRHNF HG S +HR+ GSTG PGR++ K+MAG+MG + T++ L VV Sbjct: 120 AGYQKRHNFRRGPMGHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGQMGNVKKTIRKLTVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VD +R ++L+KG VPG + + ++ + Sbjct: 179 RVDAERNVLLIKGSVPGKP-GALLNIQPA 206 >gi|289641166|ref|ZP_06473334.1| ribosomal protein L3 [Frankia symbiont of Datisca glomerata] gi|289509107|gb|EFD30038.1| ribosomal protein L3 [Frankia symbiont of Datisca glomerata] Length = 244 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 97/213 (45%), Positives = 125/213 (58%), Gaps = 2/213 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R IPVTV+ V RT D++GY AVQ+G GE + V++ Sbjct: 8 GLLGTKLGMTQVWDANNRVIPVTVIKAGPNVVTQVRTSDRDGYSAVQLGYGEIDPRRVTQ 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+RG F+ V P++ L E R + P G + F+ G +VDVTG + GKGF+G Sbjct: 68 PLRGHFARAGVPPRRHLVELRTADATNYRP-GQELTGEIFSAGSIVDVTGTSKGKGFAGV 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GL A HGV HRS GS G PGRVFK +MAGRMG RVT L + +VD Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGHERVTTAGLTIHAVD 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 +RG +LVKG VPG +LVR + K Sbjct: 187 TERGFLLVKGAVPGPD-GGLVLVRSAAKRPAPA 218 >gi|228478031|ref|ZP_04062642.1| 50S ribosomal protein L3 [Streptococcus salivarius SK126] gi|312862472|ref|ZP_07722715.1| 50S ribosomal protein L3 [Streptococcus vestibularis F0396] gi|322374045|ref|ZP_08048579.1| 50S ribosomal protein L3 [Streptococcus sp. C150] gi|322515867|ref|ZP_08068809.1| 50S ribosomal protein L3 [Streptococcus vestibularis ATCC 49124] gi|228250211|gb|EEK09464.1| 50S ribosomal protein L3 [Streptococcus salivarius SK126] gi|311102115|gb|EFQ60315.1| 50S ribosomal protein L3 [Streptococcus vestibularis F0396] gi|321277011|gb|EFX54082.1| 50S ribosomal protein L3 [Streptococcus sp. C150] gi|322125654|gb|EFX96981.1| 50S ribosomal protein L3 [Streptococcus vestibularis ATCC 49124] Length = 208 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 94/213 (44%), Positives = 131/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VGS + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSEITVDTFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLEVV Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207 >gi|320009102|gb|ADW03952.1| 50S ribosomal protein L3 [Streptomyces flavogriseus ATCC 33331] Length = 214 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 98/211 (46%), Positives = 129/211 (61%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGMT V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+ Sbjct: 6 KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 66 KPLKGHFAKADVTPRRHLVELR-TPDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF GL A HGV HRS GS G PGRVFK +MAGRMG RVT +NL + +V Sbjct: 125 VMKRHNFKGLGAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+L+KG VPG +LVR + K A Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214 >gi|107024303|ref|YP_622630.1| 50S ribosomal protein L3 [Burkholderia cenocepacia AU 1054] gi|116688372|ref|YP_833995.1| 50S ribosomal protein L3 [Burkholderia cenocepacia HI2424] gi|123244306|sp|Q1BRU8|RL3_BURCA RecName: Full=50S ribosomal protein L3 gi|166233123|sp|A0K3M5|RL3_BURCH RecName: Full=50S ribosomal protein L3 gi|105894492|gb|ABF77657.1| LSU ribosomal protein L3P [Burkholderia cenocepacia AU 1054] gi|116646461|gb|ABK07102.1| LSU ribosomal protein L3P [Burkholderia cenocepacia HI2424] Length = 217 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 96/212 (45%), Positives = 129/212 (60%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 2 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR+ L G+V F VGQ VDV G++IGKG Sbjct: 62 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGADLFEVGQKVDVQGVSIGKG 121 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RATHG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 122 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 181 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D +R L+LVKG +PGA K + V + K Sbjct: 182 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVK 212 >gi|331091667|ref|ZP_08340501.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 2_1_46FAA] gi|330403424|gb|EGG82983.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 2_1_46FAA] Length = 226 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 90/228 (39%), Positives = 125/228 (54%), Gaps = 19/228 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58 M+ ++A K+GMT ++N +G PVTVL C V +T++ +GY AVQVG + K Sbjct: 1 MKKAILATKVGMTQIFNEDGALTPVTVLQAGPCVVTQIKTVENDGYSAVQVGFVDKKDKI 60 Query: 59 --------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V+K +G F VS K+ + EF+ + D+ + F Sbjct: 61 VNVDKNGKKEIVHRHGVTKAEKGHFDKAGVSGKRFVREFKFENADE-YTLAQEIKADIFA 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G VD T ++ GKGF GA+KRHN THG S HR GS G DP +VFK KKM Sbjct: 120 AGDKVDATAISKGKGFQGAIKRHNQHRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G MG ++T++NLE+V VD + LILVKG VPG KK S + +++S K+ Sbjct: 179 GHMGSKKITIQNLEIVRVDAENNLILVKGSVPGPKK-SLVTIKESVKA 225 >gi|325282640|ref|YP_004255181.1| 50S ribosomal protein L3 [Deinococcus proteolyticus MRP] gi|324314449|gb|ADY25564.1| 50S ribosomal protein L3 [Deinococcus proteolyticus MRP] Length = 206 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 95/211 (45%), Positives = 124/211 (58%), Gaps = 7/211 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ K+GMT ++ + R +PVTV+ C VV +T + +GY AVQ+G G+ K K ++ Sbjct: 2 KGILGTKIGMTQIW-KDDRAVPVTVILAGPCPVVQRKTNEVDGYEAVQIGFGDRKEKGLN 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G ++SP + L EFR D P G F G+ +DVTG + GKGF G Sbjct: 61 KPQLGHLKKADISPVRYLREFR-----DFSPEGDEVRVDVFGEGEKIDVTGTSKGKGFQG 115 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKR NF G A+HG HR GS G R+ PGRV+K KKMAG MG RVTV+NLEVV V Sbjct: 116 VMKRWNFAGGPASHGAKKWHRRPGSIGQRKTPGRVYKGKKMAGHMGDERVTVQNLEVVEV 175 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 LILVKG VPGA +++R + K Sbjct: 176 RPDENLILVKGAVPGAN-GGLVILRGAVKGG 205 >gi|197303812|ref|ZP_03168848.1| hypothetical protein RUMLAC_02551 [Ruminococcus lactaris ATCC 29176] gi|197297105|gb|EDY31669.1| hypothetical protein RUMLAC_02551 [Ruminococcus lactaris ATCC 29176] Length = 242 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 88/229 (38%), Positives = 125/229 (54%), Gaps = 20/229 (8%) Query: 1 MRSGVVARKLGMTCVYNI-EGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV- 58 M+ ++A K+GMT ++N +G IPVTVL C V +T++ +GY AVQVG + K Sbjct: 16 MKKAILATKVGMTQIFNEEDGVLIPVTVLQAGPCVVTQVKTVENDGYSAVQVGYVDKKEK 75 Query: 59 ---------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103 V+K +G F VS K+ + EFR + ++ + F Sbjct: 76 IVTKDNSGKKSIAHRNGVTKAEKGHFDKAGVSGKRYVKEFRFENAEE-YTLAQEIKADIF 134 Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 G +D T ++ GKGF GA+KRH THG S HR GS G DP +VFK KKM Sbjct: 135 AAGDKIDATAISKGKGFQGAIKRHGQSRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKM 193 Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G+MG ++TV+NLEVV VD + L+LVKG VPG KK + ++++ K+ Sbjct: 194 PGQMGNKKITVQNLEVVRVDAENNLLLVKGSVPGPKK-CLVTIKETVKA 241 >gi|308178136|ref|YP_003917542.1| 50S ribosomal protein L3 [Arthrobacter arilaitensis Re117] gi|307745599|emb|CBT76571.1| 50S ribosomal protein L3 [Arthrobacter arilaitensis Re117] Length = 216 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 92/211 (43%), Positives = 129/211 (61%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ IPVTV+ D+ V +++GY AVQ+G G+ + V+ Sbjct: 8 KGLLGTKLGMTQVWDSNNNLIPVTVVQADSNVVTKLINEERDGYTAVQIGYGQIDPRKVT 67 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F + V+P++ L E R D G S F GQ VDV G + GKGF+G Sbjct: 68 KPLAGHFEAAGVTPRRHLVELR-TADAAEYTAGQELSVEVFEAGQKVDVVGTSKGKGFAG 126 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF G+ A+HG +HR GS G PGRVF+ +KMAGRMG RVT +NL + ++ Sbjct: 127 VMKRHNFHGVGASHGAHKNHRKPGSIGGASTPGRVFRGQKMAGRMGAERVTTQNLTIHAI 186 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++ L+L+KG VPGA + +LVR++ K A Sbjct: 187 DAEKNLLLIKGAVPGA-RGRVVLVRNAVKGA 216 >gi|227832219|ref|YP_002833926.1| 50S ribosomal protein L3 [Corynebacterium aurimucosum ATCC 700975] gi|262183926|ref|ZP_06043347.1| 50S ribosomal protein L3 [Corynebacterium aurimucosum ATCC 700975] gi|254803667|sp|C3PKQ2|RL3_CORA7 RecName: Full=50S ribosomal protein L3 gi|227453235|gb|ACP31988.1| 50S ribosomal protein L3 [Corynebacterium aurimucosum ATCC 700975] Length = 218 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 87/214 (40%), Positives = 122/214 (57%), Gaps = 2/214 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ E R +PVTV+ C V RT + +GY A+Q+ GE + V+ Sbjct: 7 KGILGTKLGMTQVFDEENRVVPVTVVEAGPCVVTQIRTKETDGYNAIQIAFGEKDPRKVN 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P++ + E R+ D VG F VDVTG T G G++G Sbjct: 67 KPATGHFKKAGVTPRRYVAEIRMD-DTSAYEVGQEVKVDIFEGVSFVDVTGTTKGHGYAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRH F G A HG +HR G G PGRVFK K+MAGRMG +RVT +NL++ + Sbjct: 126 AMKRHGFAGQGAAHGNQAAHRRVGGIGGASFPGRVFKGKRMAGRMGQDRVTTQNLKIQKI 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D + L+L+KG +PGA + + V+ + K + Sbjct: 186 DAESNLLLIKGAIPGA-RGGLVTVKTAVKGGAHA 218 >gi|292669860|ref|ZP_06603286.1| 50S ribosomal protein L3 [Selenomonas noxia ATCC 43541] gi|292648657|gb|EFF66629.1| 50S ribosomal protein L3 [Selenomonas noxia ATCC 43541] Length = 220 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 98/219 (44%), Positives = 131/219 (59%), Gaps = 5/219 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 + ++ RKLGMT ++ EGR +PVTV+ N V+ ++T + +GY AVQ+G GE K KN Sbjct: 4 LAKAILGRKLGMTQIFTEEGRVVPVTVVESGNNFVLQNKTDETDGYNAVQIGFGEVKEKN 63 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F V + + E R+ + VG F G LVDV G + GKGF Sbjct: 64 VNKPLKGHFEKAGVKAVRFIREMRLSAPSE-YNVGDTIGVDIFAAGDLVDVVGTSKGKGF 122 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KRHNF HG S SHR GSTG GRV K KK+ GRMGG RVTV+ L Sbjct: 123 AGGIKRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLT 181 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 VV VD R LIL+KG +PG KK +++++D+ K A K Sbjct: 182 VVRVDADRNLILIKGAIPGPKKG-FVVIKDTVKPAKAAK 219 >gi|297582450|ref|YP_003698230.1| 50S ribosomal protein L3 [Bacillus selenitireducens MLS10] gi|297140907|gb|ADH97664.1| 50S ribosomal protein L3 [Bacillus selenitireducens MLS10] Length = 208 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 82/212 (38%), Positives = 119/212 (56%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT +++ G ++PVTV+ V+ +T + GY A+Q+G + K Sbjct: 1 MTKGILGKKLGMTQIFSENGEQVPVTVIEASPNVVLQKKTAEGEGYEAIQIGYDDKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + P +G +PK+ + E R D +G F G +DVTG + GKGF Sbjct: 61 QNSPEKGHAEKAKTAPKRFVKEIRDVNTAD-YEIGQEIKVDIFAEGDAIDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRHN +HG S HR GS G DP V K + G+MGG VT++NLEVV Sbjct: 120 QGAIKRHNQSRGPMSHG-SRYHRRPGSMGPV-DPNHVRPGKLLPGQMGGETVTIQNLEVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R +ILVKG VPGA+K S++ + + K+ Sbjct: 178 KVDTERNVILVKGNVPGARK-SFVTITSATKA 208 >gi|254246597|ref|ZP_04939918.1| Ribosomal protein L3 [Burkholderia cenocepacia PC184] gi|124871373|gb|EAY63089.1| Ribosomal protein L3 [Burkholderia cenocepacia PC184] Length = 220 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 96/212 (45%), Positives = 129/212 (60%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 5 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 64 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR+ L G+V F VGQ VDV G++IGKG Sbjct: 65 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGADLFEVGQKVDVQGVSIGKG 124 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RATHG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 125 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 184 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D +R L+LVKG +PGA K + V + K Sbjct: 185 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVK 215 >gi|170731682|ref|YP_001763629.1| 50S ribosomal protein L3 [Burkholderia cenocepacia MC0-3] gi|206558641|ref|YP_002229401.1| 50S ribosomal protein L3 [Burkholderia cenocepacia J2315] gi|212288250|sp|B1JU22|RL3_BURCC RecName: Full=50S ribosomal protein L3 gi|212288251|sp|B4E5C0|RL3_BURCJ RecName: Full=50S ribosomal protein L3 gi|169814924|gb|ACA89507.1| ribosomal protein L3 [Burkholderia cenocepacia MC0-3] gi|198034678|emb|CAR50545.1| 50S ribosomal protein L3 [Burkholderia cenocepacia J2315] Length = 216 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 96/212 (45%), Positives = 129/212 (60%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR+ L G+V F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGADLFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RATHG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 121 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D +R L+LVKG +PGA K + V + K Sbjct: 181 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVK 211 >gi|77165787|ref|YP_344312.1| ribosomal protein L3 [Nitrosococcus oceani ATCC 19707] gi|254434228|ref|ZP_05047736.1| ribosomal protein L3 [Nitrosococcus oceani AFC27] gi|109893530|sp|Q3J8R4|RL3_NITOC RecName: Full=50S ribosomal protein L3 gi|76884101|gb|ABA58782.1| LSU ribosomal protein L3P [Nitrosococcus oceani ATCC 19707] gi|207090561|gb|EDZ67832.1| ribosomal protein L3 [Nitrosococcus oceani AFC27] Length = 215 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 97/216 (44%), Positives = 140/216 (64%), Gaps = 2/216 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ EG IPVTV+ ++ +TL+++GY AVQV GE + Sbjct: 1 MAIGLIGRKVGMTRVFTDEGASIPVTVIEATPNRISQVKTLEQDGYQAVQVTVGERRPAR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDD-LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ ++G F+ NV P +KL EFR ++ + F VGQ VDVTG+T G+G Sbjct: 61 VTSSLKGHFAKANVEPGRKLQEFRFGAEEGRDIKASGELKVDLFEVGQKVDVTGITRGRG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G ++R++FGG A+HG S+SHR+ GS G Q PGRVFK KKMAG+MG R TV+NLE+ Sbjct: 121 FAGVVRRYHFGGGDASHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGQMGNVRRTVQNLEL 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 V +D+ R L+L+KG +PGA ++V+ + K+ V Sbjct: 181 VRIDEGRQLLLIKGAIPGAPGGD-VIVKPAVKTVVK 215 >gi|302877801|ref|YP_003846365.1| 50S ribosomal protein L3 [Gallionella capsiferriformans ES-2] gi|302580590|gb|ADL54601.1| 50S ribosomal protein L3 [Gallionella capsiferriformans ES-2] Length = 214 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 100/215 (46%), Positives = 131/215 (60%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V+ +G +PVTVL + N +V +++ +GY AVQV G + Sbjct: 1 MSLGLVGRKIGMTRVFTEDGSSLPVTVLEVSNNRVTQVKSVAVDGYTAVQVAHGVRRATR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 VSK G ++ V L EF V + D L +GS S F VGQLVDVTG T GKG Sbjct: 61 VSKAAAGHYAKAGVEAGSALKEFIVTPEQLDGLALGSSISVEIFQVGQLVDVTGTTKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KRH+F RA+HG S SH GS G QDPGRVF K+M G +G + TV+NL++ Sbjct: 121 YAGTIKRHHFKSGRASHGNSKSHNVPGSIGMAQDPGRVFPGKRMTGHLGDEQRTVQNLQI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 V VD R L+LVKG VPG NS I+VR + K+ Sbjct: 181 VRVDVARQLLLVKGAVPGC-TNSKIIVRPAVKAGA 214 >gi|160895840|ref|YP_001561422.1| 50S ribosomal protein L3 [Delftia acidovorans SPH-1] gi|226725161|sp|A9BPR8|RL3_DELAS RecName: Full=50S ribosomal protein L3 gi|160361424|gb|ABX33037.1| ribosomal protein L3 [Delftia acidovorans SPH-1] Length = 224 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 91/214 (42%), Positives = 130/214 (60%), Gaps = 3/214 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G +PVTV+ + N +V +T + +GY+A+QV G K V+K Sbjct: 8 GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVALQVTFGSRKASRVTK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121 P G + V + + EFRV ++ GSV F+VGQ VDV G +IGKGF+ Sbjct: 68 PEAGHLAKAGVEAGEVMGEFRVTEETAGKYAAGSVLPVAELFSVGQKVDVQGTSIGKGFA 127 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNF RA+HG S SH GS QDPGRVF KKM G MG +T +NL+VV Sbjct: 128 GTIKRHNFRSQRASHGNSRSHNVPGSISMAQDPGRVFPGKKMTGHMGDETITTQNLDVVR 187 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +D+ R L+L+KG VPG+ K ++ VR + K+ + Sbjct: 188 IDEARQLLLIKGAVPGS-KGGFVTVRPAIKAKAS 220 >gi|315655881|ref|ZP_07908779.1| 50S ribosomal protein L3 [Mobiluncus curtisii ATCC 51333] gi|315656193|ref|ZP_07909084.1| 50S ribosomal protein L3 [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315489945|gb|EFU79572.1| 50S ribosomal protein L3 [Mobiluncus curtisii ATCC 51333] gi|315493195|gb|EFU82795.1| 50S ribosomal protein L3 [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 218 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 93/211 (44%), Positives = 130/211 (61%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 ++ RKLGMT V++ +G+ IPVTV+ ++ V RT + +GY AVQ+G G+ + V+ Sbjct: 10 KALLGRKLGMTQVWDEDGKLIPVTVVQVEKNVVTQIRTNETDGYDAVQLGFGKMDERKVT 69 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KPM G F+ V P++ L E R D +G F G LVDV+G T GKGF+G Sbjct: 70 KPMAGHFAKAGVEPRRHLAEIR-TGDASSYELGQELGAEVFEAGTLVDVSGNTKGKGFAG 128 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G PGRVFK MAGRMGGNR T+ NL+V +V Sbjct: 129 VMKRHGFQGVSASHGAHRNHRKPGSIGACATPGRVFKGLNMAGRMGGNRRTIMNLKVQAV 188 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+++ G +PG K +++R + K A Sbjct: 189 DAEKGLVVLTGAIPGP-KGGIVMIRSAVKGA 218 >gi|154706152|ref|YP_001425182.1| 50S ribosomal protein L3 [Coxiella burnetii Dugway 5J108-111] gi|189042840|sp|A9KD31|RL3_COXBN RecName: Full=50S ribosomal protein L3 gi|154355438|gb|ABS76900.1| LSU ribosomal protein L3P [Coxiella burnetii Dugway 5J108-111] Length = 217 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 1/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK GMT ++ G IPVTV+ + ++ +T++ +GY A QV G+ Sbjct: 1 MSIGLIGRKCGMTRIFTETGSSIPVTVVEVIPNRITQVKTVETDGYRAFQVAYGKKSSAR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G +S V L EFR+ ++ G F GQ+VDV G+T GKG Sbjct: 61 VNKPLAGHYSKAAVEAGNALREFRLGNEELTEAKAGDELKVDIFKEGQVVDVRGLTRGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +K HNF ATHG S+SHR+ GS G Q PGRV+K KKMAG++G TV++ E+ Sbjct: 121 FAGTVKHHNFRTQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGQLGNVYCTVQSQEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + VD +R L+L+KG +PGA I+ + S K Sbjct: 181 IKVDVERNLLLIKGALPGAPGGEVIITQSSKKR 213 >gi|261409521|ref|YP_003245762.1| 50S ribosomal protein L3 [Paenibacillus sp. Y412MC10] gi|329922035|ref|ZP_08277828.1| 50S ribosomal protein L3 [Paenibacillus sp. HGF5] gi|261285984|gb|ACX67955.1| 50S ribosomal protein L3 [Paenibacillus sp. Y412MC10] gi|328942418|gb|EGG38682.1| 50S ribosomal protein L3 [Paenibacillus sp. HGF5] Length = 207 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 85/210 (40%), Positives = 118/210 (56%), Gaps = 4/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RKLGMT V+ EG IPVTV+ C V+ + L+ +GY A+QVG + K + Sbjct: 2 KGILGRKLGMTQVFTPEGVVIPVTVIEAGPCVVLQKKDLENDGYEAIQVGFSDKKENRSN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G N +PK+ + E R D + VG F G+ VDVTG++ GKGF G Sbjct: 62 KPEAGHAKKANTAPKRYVREIRGV-DLASVEVGQELKADVFAEGEFVDVTGISKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR +HG S HR GS G Q RV K K++ G MG VT++ LEVV V Sbjct: 121 VIKRWGQSRGPMSHG-SRYHRRPGSMGSIQ-ANRVPKGKRLPGHMGNETVTIQKLEVVKV 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R +ILVKG +PG KK ++ ++++ K Sbjct: 179 DAERNVILVKGSIPGPKKG-FVQIKETVKK 207 >gi|282860810|ref|ZP_06269876.1| ribosomal protein L3 [Streptomyces sp. ACTE] gi|282564546|gb|EFB70082.1| ribosomal protein L3 [Streptomyces sp. ACTE] Length = 214 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 98/211 (46%), Positives = 129/211 (61%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGMT V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+ Sbjct: 6 KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 66 KPLKGHFAKADVTPRRHLVELR-TPDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF GL A HGV HRS GS G PGRVFK +MAGRMG RVT +NL + +V Sbjct: 125 VMKRHNFKGLGAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+L+KG VPG +LVR + K A Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214 >gi|319787925|ref|YP_004147400.1| 50S ribosomal protein L3 [Pseudoxanthomonas suwonensis 11-1] gi|317466437|gb|ADV28169.1| 50S ribosomal protein L3 [Pseudoxanthomonas suwonensis 11-1] Length = 216 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 97/210 (46%), Positives = 131/210 (62%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK GM+ V+ +GR IPVT++ ++ +T++ +GY AVQV G + V+K Sbjct: 8 GLVGRKAGMSRVFTEDGRSIPVTLIEATPNRITQIKTVEADGYSAVQVTTGARRASLVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P+ G ++ V + L+EFRV + VG F VGQ+VDV G+T GKGF G Sbjct: 68 PLAGHYAKAKVEAGRGLWEFRVADEKIGDFAVGGEIKADIFEVGQIVDVQGVTKGKGFQG 127 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHNF ATHG S+SHR+ GS G RQ PGRVF KKMAG MG + + +NLEVV V Sbjct: 128 TIKRHNFTMGDATHGNSLSHRAPGSIGQRQTPGRVFPGKKMAGHMGAEQQSTQNLEVVRV 187 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +RGLI V+G VPGA ++VR + K+ Sbjct: 188 DAERGLIAVRGAVPGAPGGD-VIVRPASKA 216 >gi|309789667|ref|ZP_07684248.1| ribosomal protein L3 [Oscillochloris trichoides DG6] gi|308228403|gb|EFO82050.1| ribosomal protein L3 [Oscillochloris trichoides DG6] Length = 209 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 93/212 (43%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M SG++ RKLGM V++ +G IPVTV+ C V RT++++GY AVQ+G + + + Sbjct: 1 MISGMLGRKLGMMQVFSDKGEVIPVTVIAAGPCIVTQVRTVERDGYAAVQIGYEQVEPRK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + N + L EF + P G V + F GQ +DV+G + G+GF Sbjct: 61 LTKPQQGHLKAANAML-RYLREFPADNPQEHTP-GEVINVELFKPGQKIDVSGTSKGRGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH F G THG S HR+ GS G PGRV+K +KMAGRMGG RVT++NLEVV Sbjct: 119 AGVVKRHGFRGGPKTHGQSDRHRAPGSIGAGTTPGRVWKGQKMAGRMGGKRVTIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ LILVKG VPGA+ + +R + K+ Sbjct: 179 EVLPEKNLILVKGSVPGARTG-LLEIRRAVKA 209 >gi|290958151|ref|YP_003489333.1| 50S ribosomal protein L3 [Streptomyces scabiei 87.22] gi|260647677|emb|CBG70782.1| 50S ribosomal protein L3 [Streptomyces scabiei 87.22] Length = 214 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 97/211 (45%), Positives = 127/211 (60%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ GE + V+ Sbjct: 6 KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F+ +V+P++ L E R D +G S F G VDVTG + GKGF+G Sbjct: 66 KPLKGHFAKADVTPRRHLVEIR-TADASEYTLGQEISAEVFEAGVKVDVTGKSKGKGFAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+L+KG VPG +LVR + K A Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214 >gi|256825886|ref|YP_003149846.1| 50S ribosomal protein L3P [Kytococcus sedentarius DSM 20547] gi|256689279|gb|ACV07081.1| LSU ribosomal protein L3P [Kytococcus sedentarius DSM 20547] Length = 219 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 94/210 (44%), Positives = 127/210 (60%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ KLGMT V++ + R +PVTV+ + V RT D +GY AVQ+ G+ + VS Sbjct: 12 GVLGTKLGMTQVWDEDNRLVPVTVVQVAPNVVTQIRTQDTDGYGAVQIATGDIDPRKVSN 71 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+RG F V+P++ + E R D +G + F G VDVTG T GKGF+G Sbjct: 72 PLRGHFEKAGVTPRRHVTELR-TADSGSYELGQELTVETFENGATVDVTGTTKGKGFAGV 130 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G+ A+HG +HR GS G PGRVF+ +MAGRMGG R T +NL + +VD Sbjct: 131 MKRHGFAGVSASHGAHRNHRKPGSIGGCATPGRVFRGTRMAGRMGGERQTTQNLTIHAVD 190 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +GL+L+KG VPGA + +LVR + K A Sbjct: 191 ADKGLLLIKGAVPGA-RGGLVLVRSAAKGA 219 >gi|323357372|ref|YP_004223768.1| ribosomal protein L3 [Microbacterium testaceum StLB037] gi|323273743|dbj|BAJ73888.1| ribosomal protein L3 [Microbacterium testaceum StLB037] Length = 219 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 96/214 (44%), Positives = 133/214 (62%), Gaps = 3/214 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 + G++ KLGMT V++ G+ +PVTV+ + V R+L+K+GY AVQ+G G+ + Sbjct: 8 ISKGLLGTKLGMTQVWDENGKLVPVTVIEVAPNVVTQLRSLEKDGYNAVQIGYGQIDPRK 67 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119 V+KP+ F + V+P++ L E R D +G + F GQLVDV G + GKG Sbjct: 68 VNKPLTAHFDAAGVTPRRHLTEVR-TADAADYTLGQELTVDGLFEAGQLVDVVGTSKGKG 126 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 +G MKRHNF G+ A+HG +HR GS G P RVFK +MAGRMGG RVTV NL V Sbjct: 127 TAGVMKRHNFKGVSASHGAHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGERVTVLNLTV 186 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +VD ++GL+LVKG VPGA + + VR++ K A Sbjct: 187 HAVDAEKGLMLVKGAVPGA-RGRIVYVRNAVKGA 219 >gi|85858146|ref|YP_460348.1| 50S ribosomal protein L3P [Syntrophus aciditrophicus SB] gi|109893562|sp|Q2LQA1|RL3_SYNAS RecName: Full=50S ribosomal protein L3 gi|85721237|gb|ABC76180.1| LSU ribosomal protein L3P [Syntrophus aciditrophicus SB] Length = 218 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 83/212 (39%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ RK+GMT V+ +G IPVT + ++ + +T++K+GY A+Q+G G K Sbjct: 10 MKKMIIGRKIGMTQVFAEDGAAIPVTAIEVEPSVITQKKTVEKDGYDAIQLGYGRIKQNK 69 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP++G F+ + + L E R + + +G + F G++VD+TG T GKGF Sbjct: 70 ATKPLQGHFAKADKGCFRILKEMRCDQIQE-YELGQEITLDIFESGEMVDITGTTKGKGF 128 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH F G R++HG S+ HR+ GS G P RVFK KK+ G+MG + TVKNL + Sbjct: 129 AGVIKRHGFRGGRSSHG-SMFHRAPGSIGASAYPSRVFKGKKLPGQMGNKQKTVKNLMIW 187 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 S+ +R LIL++G VPGA +N ++ ++ S K+ Sbjct: 188 SLRPERNLILIRGAVPGA-RNGYLFIKQSAKA 218 >gi|298345472|ref|YP_003718159.1| 50S ribosomal protein L3 [Mobiluncus curtisii ATCC 43063] gi|304391028|ref|ZP_07372980.1| 50S ribosomal protein L3 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|298235533|gb|ADI66665.1| 50S ribosomal protein L3 [Mobiluncus curtisii ATCC 43063] gi|304325911|gb|EFL93157.1| 50S ribosomal protein L3 [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 217 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 93/211 (44%), Positives = 130/211 (61%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 ++ RKLGMT V++ +G+ IPVTV+ ++ V RT + +GY AVQ+G G+ + V+ Sbjct: 9 KALLGRKLGMTQVWDEDGKLIPVTVVQVEKNVVTQIRTNETDGYDAVQLGFGKMDERKVT 68 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KPM G F+ V P++ L E R D +G F G LVDV+G T GKGF+G Sbjct: 69 KPMAGHFAKAGVEPRRHLAEIR-TGDASSYELGQELGAEVFEAGTLVDVSGNTKGKGFAG 127 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G PGRVFK MAGRMGGNR T+ NL+V +V Sbjct: 128 VMKRHGFQGVSASHGAHRNHRKPGSIGACATPGRVFKGLNMAGRMGGNRRTIMNLKVQAV 187 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+++ G +PG K +++R + K A Sbjct: 188 DAEKGLVVLTGAIPGP-KGGIVMIRSAVKGA 217 >gi|16804670|ref|NP_466155.1| 50S ribosomal protein L3 [Listeria monocytogenes EGD-e] gi|46908804|ref|YP_015193.1| 50S ribosomal protein L3 [Listeria monocytogenes str. 4b F2365] gi|47094372|ref|ZP_00232066.1| ribosomal protein L3 [Listeria monocytogenes str. 4b H7858] gi|217966169|ref|YP_002351847.1| ribosomal protein L3 [Listeria monocytogenes HCC23] gi|224499305|ref|ZP_03667654.1| 50S ribosomal protein L3 [Listeria monocytogenes Finland 1988] gi|224503574|ref|ZP_03671881.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL R2-561] gi|226225177|ref|YP_002759284.1| ribosomal protein L3 [Listeria monocytogenes Clip81459] gi|254825007|ref|ZP_05230008.1| ribosomal protein L3 [Listeria monocytogenes FSL J1-194] gi|254829081|ref|ZP_05233768.1| ribosomal protein L3 [Listeria monocytogenes FSL N3-165] gi|254830936|ref|ZP_05235591.1| 50S ribosomal protein L3 [Listeria monocytogenes 10403S] gi|254854162|ref|ZP_05243510.1| ribosomal protein L3 [Listeria monocytogenes FSL R2-503] gi|254899917|ref|ZP_05259841.1| 50S ribosomal protein L3 [Listeria monocytogenes J0161] gi|254912877|ref|ZP_05262889.1| 50S ribosomal protein L3 [Listeria monocytogenes J2818] gi|254931098|ref|ZP_05264457.1| ribosomal protein L3 [Listeria monocytogenes HPB2262] gi|254937257|ref|ZP_05268954.1| ribosomal protein L3 [Listeria monocytogenes F6900] gi|254991854|ref|ZP_05274044.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL J2-064] gi|255027144|ref|ZP_05299130.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL J2-003] gi|255029693|ref|ZP_05301644.1| 50S ribosomal protein L3 [Listeria monocytogenes LO28] gi|255519640|ref|ZP_05386877.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL J1-175] gi|284800482|ref|YP_003412347.1| 50S ribosomal protein L3 [Listeria monocytogenes 08-5578] gi|284993668|ref|YP_003415436.1| 50S ribosomal protein L3 [Listeria monocytogenes 08-5923] gi|290891817|ref|ZP_06554814.1| ribosomal protein L3 [Listeria monocytogenes FSL J2-071] gi|300763617|ref|ZP_07073615.1| ribosomal protein L3 [Listeria monocytogenes FSL N1-017] gi|42559668|sp|Q8Y440|RL3_LISMO RecName: Full=50S ribosomal protein L3 gi|67461150|sp|Q71WE6|RL3_LISMF RecName: Full=50S ribosomal protein L3 gi|254803678|sp|B8DB08|RL3_LISMH RecName: Full=50S ribosomal protein L3 gi|259709728|sp|C1KZI0|RL3_LISMC RecName: Full=50S ribosomal protein L3 gi|16412120|emb|CAD00710.1| ribosomal protein L3 [Listeria monocytogenes EGD-e] gi|46882077|gb|AAT05370.1| ribosomal protein L3 [Listeria monocytogenes serotype 4b str. F2365] gi|47017254|gb|EAL08093.1| ribosomal protein L3 [Listeria monocytogenes str. 4b H7858] gi|217335439|gb|ACK41233.1| ribosomal protein L3 [Listeria monocytogenes HCC23] gi|225877639|emb|CAS06353.1| ribosomal protein L3 [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258601491|gb|EEW14816.1| ribosomal protein L3 [Listeria monocytogenes FSL N3-165] gi|258607554|gb|EEW20162.1| ribosomal protein L3 [Listeria monocytogenes FSL R2-503] gi|258609863|gb|EEW22471.1| ribosomal protein L3 [Listeria monocytogenes F6900] gi|284056044|gb|ADB66985.1| 50S ribosomal protein L3 [Listeria monocytogenes 08-5578] gi|284059135|gb|ADB70074.1| 50S ribosomal protein L3 [Listeria monocytogenes 08-5923] gi|290558411|gb|EFD91928.1| ribosomal protein L3 [Listeria monocytogenes FSL J2-071] gi|293582645|gb|EFF94677.1| ribosomal protein L3 [Listeria monocytogenes HPB2262] gi|293590876|gb|EFF99210.1| 50S ribosomal protein L3 [Listeria monocytogenes J2818] gi|293594248|gb|EFG02009.1| ribosomal protein L3 [Listeria monocytogenes FSL J1-194] gi|300515894|gb|EFK42943.1| ribosomal protein L3 [Listeria monocytogenes FSL N1-017] gi|307572221|emb|CAR85400.1| rplC [Listeria monocytogenes L99] gi|328468116|gb|EGF39122.1| 50S ribosomal protein L3 [Listeria monocytogenes 1816] gi|328469805|gb|EGF40722.1| 50S ribosomal protein L3 [Listeria monocytogenes 220] Length = 209 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 127/212 (59%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGRKVGMTQVFTENGELIPVTVIEAAQNVVLQKKTVETDGYEAVQIGFEDKRAIL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EFR + D +G+ F G ++D TG++ GKGF Sbjct: 61 SNKPEQGHVAKANTTPKRFIREFR-DVNLDEYEIGAEVKVDVFAEGDIIDATGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK + GRMGG ++T++NLE+V Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQITIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++ ++LVKG VPGAKK + + ++ + K+ Sbjct: 178 KVDVEKNVLLVKGNVPGAKK-ALVQIKTATKA 208 >gi|254391393|ref|ZP_05006596.1| 50S ribosomal protein L3 [Streptomyces clavuligerus ATCC 27064] gi|294814467|ref|ZP_06773110.1| 50S ribosomal protein L3 [Streptomyces clavuligerus ATCC 27064] gi|326442856|ref|ZP_08217590.1| 50S ribosomal protein L3 [Streptomyces clavuligerus ATCC 27064] gi|197705083|gb|EDY50895.1| 50S ribosomal protein L3 [Streptomyces clavuligerus ATCC 27064] gi|294327066|gb|EFG08709.1| 50S ribosomal protein L3 [Streptomyces clavuligerus ATCC 27064] Length = 214 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 98/211 (46%), Positives = 129/211 (61%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGMT V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+ Sbjct: 6 KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDVDGYESVQIAFGEIDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F+ +V+P++ L E R D +G + + F G VDVTG + GKGF+G Sbjct: 66 KPLKGHFAKADVTPRRHLVELRTS-DASEYTLGQEITAAVFESGVKVDVTGKSKGKGFAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V Sbjct: 125 VMKRHNFRGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+L+KG VPG +LVR + K A Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214 >gi|94676516|ref|YP_588776.1| ribosomal protein L3 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|123260557|sp|Q1LTD8|RL3_BAUCH RecName: Full=50S ribosomal protein L3 gi|94219666|gb|ABF13825.1| ribosomal protein L3 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 212 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 84/209 (40%), Positives = 131/209 (62%), Gaps = 1/209 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT ++ EG IP+T++ ++ + +++ +GY A QV G K V Sbjct: 2 KGLIGRKIGMTRIFTDEGISIPITIIQVEPNIITQVKSIQTDGYYAYQVTTGTKKPNLVI 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ + L+EFR++ ++ + +G + + YFT + VD+TG + GKGFSG Sbjct: 62 KPEAGHFAKAGTKAGRSLWEFRLKHEEKPINIGEILTLEYFTNIKKVDITGTSKGKGFSG 121 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF A+HG S+SHR GS G Q PG+VFK KKMAG MG RVT++NL+++ + Sbjct: 122 TVKRWNFHMQDASHGNSLSHRVTGSIGQNQTPGKVFKGKKMAGHMGNKRVTIQNLDIIRI 181 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D ++ L+L+KG +PGA N I ++ + K Sbjct: 182 DLRKNLLLIKGAIPGAPGNDLI-IKPAIK 209 >gi|167838212|ref|ZP_02465071.1| 50S ribosomal protein L3 [Burkholderia thailandensis MSMB43] Length = 219 Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats. Identities = 99/212 (46%), Positives = 131/212 (61%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR+ D L G+V P F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVQAGEILKEFRIAADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D R L+LVKG VPGA K + V + K Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211 >gi|332107866|gb|EGJ09090.1| 50S ribosomal protein L3 [Rubrivivax benzoatilyticus JA2] Length = 223 Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 97/217 (44%), Positives = 130/217 (59%), Gaps = 2/217 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G IPVTVL + N +V +T+ +GY A+QV G K V+K Sbjct: 8 GLLGRKVGMMRIFTDDGDAIPVTVLDVSNNRVTQVKTVATDGYSALQVAFGARKASRVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P G + V + L EFRV + G+V S F GQLVDV G +IGKG++G Sbjct: 68 PEAGHLAKAGVEAGEVLKEFRVTAEIAGQYQPGAVVPVSLFAAGQLVDVQGTSIGKGYAG 127 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHNFG RA+HG S SH GS QDPGRVF KKM G MG VT +NL++V V Sbjct: 128 TIKRHNFGSQRASHGNSRSHNVPGSISMAQDPGRVFPGKKMTGHMGDETVTTQNLDIVRV 187 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 D+ R L+LV+G VPGA KN ++VR + K + + Sbjct: 188 DEARSLLLVRGAVPGA-KNGHVVVRPAVKVKLKKGAQ 223 >gi|229818240|ref|ZP_04448522.1| hypothetical protein BIFANG_03538 [Bifidobacterium angulatum DSM 20098] gi|229784491|gb|EEP20605.1| hypothetical protein BIFANG_03538 [Bifidobacterium angulatum DSM 20098] Length = 216 Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 83/212 (39%), Positives = 120/212 (56%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R ++ RKLGM+ V++ G +PVT++ + V +T + +GY AVQ+G G+ V Sbjct: 7 RKALLGRKLGMSQVWDENGFFVPVTLVDVSTNVVTAIKTEETDGYTAVQIGYGQIDPTKV 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G F+ V+P++ L E R + +G + F G VDVTG T GKGF+ Sbjct: 67 TKPLAGHFAKAGVTPRRHLVEVREDNATE-YELGQELTAEVFEEGAEVDVTGTTKGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F R THG + R GS G P R+ K K+MAGRMG TV+NL +VS Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTSTVQNLTIVS 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + G++ +KG +PG K +LVR + K A Sbjct: 186 ADVENGVLAIKGAIPGP-KGGIVLVRSAVKGA 216 >gi|254383172|ref|ZP_04998526.1| 50S ribosomal protein L3 [Streptomyces sp. Mg1] gi|194342071|gb|EDX23037.1| 50S ribosomal protein L3 [Streptomyces sp. Mg1] Length = 214 Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 98/211 (46%), Positives = 129/211 (61%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGMT V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+ Sbjct: 6 KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDIDGYESVQIAFGEIDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 66 KPLKGHFAKADVTPRRHLVELRTS-DASEYTLGQEITAQVFESGVKVDVTGNSKGKGFAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF GL A HGV HRS GS G PGRVFK +MAGRMG RVT +NL + +V Sbjct: 125 VMKRHNFRGLGAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+L+KG VPG +LVR + K A Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214 >gi|322410858|gb|EFY01766.1| 50S ribosomal protein L3 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 208 Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 93/213 (43%), Positives = 132/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTETGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VGS + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSEITVDTFVAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVT++NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTIQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207 >gi|139438580|ref|ZP_01772096.1| Hypothetical protein COLAER_01094 [Collinsella aerofaciens ATCC 25986] gi|133776119|gb|EBA39939.1| Hypothetical protein COLAER_01094 [Collinsella aerofaciens ATCC 25986] Length = 203 Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 90/205 (43%), Positives = 119/205 (58%), Gaps = 3/205 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RK+GMT V++ + +PVTV+ C V +T +GY AVQ+G G+ K KNV+KP Sbjct: 2 ILGRKIGMTQVWDEDDNVVPVTVIQAGPCAVSQVKTQATDGYDAVQIGFGDIKAKNVNKP 61 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M G F+ V P + L E RV+ ++ VG V + + F + VDV G + GKGF G + Sbjct: 62 MAGHFAKAGVEPVRFLREVRVENGEEH-KVGEVVTVADFADVEKVDVIGTSKGKGFQGRI 120 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR THG R GS G P RV K KMAG MG RVTVKNL VV +D Sbjct: 121 KRWGQRRGPMTHGSH-FQRHPGSIGQCAYPARVLKGVKMAGHMGNERVTVKNLSVVRIDA 179 Query: 185 KRGLILVKGCVPGAKKNSWILVRDS 209 ++ LILVKG VPGA KN + +R + Sbjct: 180 EQNLILVKGAVPGA-KNGLVAIRMA 203 >gi|325261494|ref|ZP_08128232.1| 50S ribosomal protein L3 [Clostridium sp. D5] gi|324032948|gb|EGB94225.1| 50S ribosomal protein L3 [Clostridium sp. D5] Length = 226 Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 89/228 (39%), Positives = 124/228 (54%), Gaps = 19/228 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58 M+ ++A K+GMT ++N +G PVTVL C V +T D +GY AVQVG + K Sbjct: 1 MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTADNDGYSAVQVGFADKKEKI 60 Query: 59 --------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V+K +G F VS K+ + EFR + ++ + F Sbjct: 61 VTKDKSGKKEIAHRNGVTKAEKGHFDKAGVSGKRYVKEFRFENAEE-YTLAQEIKADIFE 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G +D T ++ GKGF GA+KRHN THG S HR GS G DP +VFK KKM Sbjct: 120 AGDKIDATAVSKGKGFQGAIKRHNQSRGPMTHG-SKFHRHAGSNGSASDPSKVFKGKKMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G+MG ++TV+NLEVV VD + L+LVKG VPG KK + ++++ K+ Sbjct: 179 GQMGNKKITVQNLEVVRVDAENNLLLVKGSVPGPKK-CLVTLKETVKA 225 >gi|326792607|ref|YP_004310428.1| 50S ribosomal protein L3 [Clostridium lentocellum DSM 5427] gi|326543371|gb|ADZ85230.1| 50S ribosomal protein L3 [Clostridium lentocellum DSM 5427] Length = 209 Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 90/212 (42%), Positives = 123/212 (58%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT +++ IPVTVL C V +T++ +GY A+QVG GE K K+ Sbjct: 1 MKKAILGKKIGMTQIFDENANLIPVTVLEAGPCVVTQKKTMENDGYEAIQVGFGEVKSKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V KP+ G F+ V KK L EFR+ +D VG+ F G VDV G + GKG+ Sbjct: 61 VIKPVAGHFAKAGVEAKKFLKEFRL-EDTSAYEVGTEIKADAFAAGDKVDVVGTSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+K++ HG S SHR GS G PGRV K K + MG +VTV+NLEV Sbjct: 120 QGAIKKYGQSRGPMGHG-SKSHRVAGSMGAATSPGRVMKGKGLPSHMGCVQVTVQNLEVA 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + LIL+KG VPG K + I ++DS K+ Sbjct: 179 RVDADKNLILIKGAVPGP-KGTIITIKDSCKA 209 >gi|222152265|ref|YP_002561440.1| 50S ribosomal protein L3 [Streptococcus uberis 0140J] gi|254803695|sp|B9DSV0|RL3_STRU0 RecName: Full=50S ribosomal protein L3 gi|222113076|emb|CAR40439.1| 50S ribosomal protein L3 [Streptococcus uberis 0140J] Length = 208 Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 93/213 (43%), Positives = 132/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VGS + F+ G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSEITVESFSAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207 >gi|83720557|ref|YP_443572.1| 50S ribosomal protein L3 [Burkholderia thailandensis E264] gi|257137645|ref|ZP_05585907.1| 50S ribosomal protein L3 [Burkholderia thailandensis E264] gi|109893417|sp|Q2SU27|RL3_BURTA RecName: Full=50S ribosomal protein L3 gi|83654382|gb|ABC38445.1| ribosomal protein L3 [Burkholderia thailandensis E264] Length = 219 Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 99/212 (46%), Positives = 132/212 (62%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR++ D L G+V P F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVQTGEILKEFRIEADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D R L+LVKG VPGA K + V + K Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211 >gi|239929514|ref|ZP_04686467.1| 50S ribosomal protein L3 [Streptomyces ghanaensis ATCC 14672] gi|291437839|ref|ZP_06577229.1| 50S ribosomal protein L3 [Streptomyces ghanaensis ATCC 14672] gi|291340734|gb|EFE67690.1| 50S ribosomal protein L3 [Streptomyces ghanaensis ATCC 14672] Length = 214 Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 97/211 (45%), Positives = 128/211 (60%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ GE + V+ Sbjct: 6 KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 66 KPLKGHFAKADVTPRRHLVEIRTS-DASEYTLGQEVTAEVFEAGVKVDVTGKSKGKGFAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNFGGL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V Sbjct: 125 VMKRHNFGGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+L+KG VPG +LVR + K A Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214 >gi|297159597|gb|ADI09309.1| 50S ribosomal protein L3 [Streptomyces bingchenggensis BCW-1] Length = 214 Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 97/211 (45%), Positives = 126/211 (59%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGMT V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+ Sbjct: 6 KGVLGEKLGMTQVWDENNRIVPVTVVKAGPCVVTQVRTADSDGYDAVQIAFGEIDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKG +G Sbjct: 66 KPLKGHFAKADVTPRRHLVELR-TADASEYALGQEVTAEVFESGVKVDVTGTSKGKGTAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V Sbjct: 125 VMKRHGFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+L+KG VPG +LVR + K A Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214 >gi|218290005|ref|ZP_03494182.1| ribosomal protein L3 [Alicyclobacillus acidocaldarius LAA1] gi|218239990|gb|EED07177.1| ribosomal protein L3 [Alicyclobacillus acidocaldarius LAA1] Length = 211 Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 91/213 (42%), Positives = 124/213 (58%), Gaps = 4/213 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RKLGMT V+ +G +PVTV+ C V+ R LDK+GY A+Q+G + K + Sbjct: 2 KGILGRKLGMTQVFTEDGDVVPVTVIEAGPCVVLQKRVLDKDGYEAIQLGFADKKASRAT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G + +PK+ + E R + VG F G +VDVTG++ GKGF+G Sbjct: 62 KPEIGHAAKAGTAPKRYIREIRGVN-VEEYEVGQQVKADIFAPGDIVDVTGVSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHN HG S HR GS G P R FK + MAGRMGG RVTV+NLEVV V Sbjct: 121 PIKRHNQHRGPMAHG-SKYHRGVGSLGSIA-PNRTFKGQTMAGRMGGERVTVQNLEVVKV 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D ++ +IL+KG VPG +NS++ +R + K Sbjct: 179 DPEKNVILIKGSVPGP-RNSFVTIRSAVKQPAK 210 >gi|241204165|ref|YP_002975261.1| 50S ribosomal protein L3 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858055|gb|ACS55722.1| ribosomal protein L3 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 213 Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 144/215 (66%), Positives = 171/215 (79%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G +PVTVL ++ QVV RT++KNGY AVQ+GAG+AKVKN Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMEAVQVVATRTVEKNGYTAVQLGAGQAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ NV PK K+ EFRV +D +LL +G+ +F GQLVDVTG TIGKGF Sbjct: 61 TSKAMRGNFAIANVEPKAKVTEFRVSED-NLLEIGTEIKAGHFAAGQLVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG RVT +NLEVV Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 S D+ RGLIL+KG VPG+ K +WI+VRD+ KSA Sbjct: 180 STDEDRGLILIKGAVPGS-KGAWIIVRDAVKSAAK 213 >gi|317054766|ref|YP_004103233.1| 50S ribosomal protein L3 [Ruminococcus albus 7] gi|315447035|gb|ADU20599.1| 50S ribosomal protein L3 [Ruminococcus albus 7] Length = 212 Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 92/214 (42%), Positives = 133/214 (62%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +K+GMT +++ G+ +PVTV+ C VV +T++K+GY AVQ+G GE + K Sbjct: 1 MQKGIIGKKIGMTQIFDEAGKIVPVTVVEAGPCVVVQKKTVEKDGYEAVQLGYGEIRAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F +V+ K+ L EFR+ D + VG + F G +VDV+G + G GF Sbjct: 61 VNKPLQGHFKKADVAIKRTLKEFRL-ADISAVNVGDIVKADVFAEGDVVDVSGTSKGHGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG +KRHN L+ THG HR GS G DP R++K KKM G+ G +VTV+NL VV Sbjct: 120 SGTIKRHNGHRLKETHGTGPVHRHAGSYGACSDPSRIYKGKKMPGQYGNVKVTVQNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 VD + LI +KG +PG KN + + DS K Sbjct: 180 KVDAENNLIAIKGAIPGP-KNGTVTICDSVKKKA 212 >gi|238025932|ref|YP_002910163.1| 50S ribosomal protein L3 [Burkholderia glumae BGR1] gi|237875126|gb|ACR27459.1| Ribosomal protein L3 [Burkholderia glumae BGR1] Length = 220 Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 94/212 (44%), Positives = 129/212 (60%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 5 MSLGLVGRKVGMTRIFTADGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 64 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR+ L G++ P F VGQ VDV G++IGKG Sbjct: 65 VTKPLAGHLAKAGVEAGEILKEFRIDATKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 124 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RATHG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 125 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 184 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D +R L+LVKG +PG K + V + K Sbjct: 185 ARIDAERKLLLVKGAIPG-TKGGKVFVTPAVK 215 >gi|332041523|gb|EGI77883.1| 50S ribosomal protein L3 [Hylemonella gracilis ATCC 19624] Length = 224 Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 88/212 (41%), Positives = 125/212 (58%), Gaps = 3/212 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ RK+GM ++ +G +PVTV+ + + +V +T D +GY+A+QV G + V Sbjct: 6 RLGLLGRKVGMMRLFTDDGDAVPVTVVDVSDNRVTQVKTQDNDGYVALQVTFGSRRASRV 65 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119 +KP G + V + + EFRV D G+ F VGQ VDV G +IGKG Sbjct: 66 TKPQAGHLAKAGVEAGEIIQEFRVAADTAAKYQAGAKLPVTEIFAVGQKVDVQGTSIGKG 125 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRHNF RA+HG S SH GS QDPGRVF K+M G MG VT +NL+V Sbjct: 126 FAGTIKRHNFSSQRASHGNSRSHNVPGSISMAQDPGRVFPGKRMTGHMGDETVTTQNLDV 185 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 + +D+ R L+L+KG VPG+ ++ VR + K Sbjct: 186 IRIDEARQLLLIKGAVPGSA-GGFVTVRPAVK 216 >gi|323144964|ref|ZP_08079524.1| 50S ribosomal protein L3 [Succinatimonas hippei YIT 12066] gi|322415243|gb|EFY06017.1| 50S ribosomal protein L3 [Succinatimonas hippei YIT 12066] Length = 212 Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 97/213 (45%), Positives = 132/213 (61%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RKLGMT V+N +G+ +PVTV+ ++ +V + ++ +GY A+QV GE K Sbjct: 1 MSIGLIGRKLGMTRVFNQDGKSVPVTVIQVEANRVTQIKNIETDGYCAIQVTTGERKTSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++K G F+ V+ + L+EFR++ + + VGS F + VDVTG + GKG Sbjct: 61 MTKAEIGHFAKTGVAAGRGLWEFRLEPSELEAYQVGSEIKVDAFKDVKKVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 +G +KR+NF THG S SHR GSTG Q PGRVFK KKM GRMG RVTV L++ Sbjct: 121 TAGTVKRYNFRTQDFTHGNSRSHRVPGSTGQNQTPGRVFKGKKMVGRMGNERVTVMCLDL 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LVKG VPGA I VR S K+ Sbjct: 181 VRVDSERNLLLVKGAVPGANNGDLI-VRPSVKA 212 >gi|29653590|ref|NP_819282.1| LSU ribosomal protein L3P [Coxiella burnetii RSA 493] gi|161830671|ref|YP_001596185.1| 50S ribosomal protein L3 [Coxiella burnetii RSA 331] gi|212213250|ref|YP_002304186.1| 50S ribosomal protein L3 [Coxiella burnetii CbuG_Q212] gi|42559616|sp|Q83ES4|RL3_COXBU RecName: Full=50S ribosomal protein L3 gi|189042841|sp|A9NAM4|RL3_COXBR RecName: Full=50S ribosomal protein L3 gi|226725157|sp|B6J263|RL3_COXB2 RecName: Full=50S ribosomal protein L3 gi|29540852|gb|AAO89796.1| LSU ribosomal protein L3P [Coxiella burnetii RSA 493] gi|161762538|gb|ABX78180.1| ribosomal protein L3 [Coxiella burnetii RSA 331] gi|212011660|gb|ACJ19041.1| LSU ribosomal protein L3P [Coxiella burnetii CbuG_Q212] Length = 217 Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 88/213 (41%), Positives = 126/213 (59%), Gaps = 1/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK GMT ++ G IPVTV+ + ++ +T++ +GY A QV G+ Sbjct: 1 MSIGLIGRKCGMTRIFTETGSSIPVTVVEVILNRITQVKTVETDGYRAFQVAYGKKSSAR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G +S V L EFR+ ++ G F GQ+VDV G+T GKG Sbjct: 61 VNKPLAGHYSKAAVEAGNALREFRLGNEELTEAKAGDELKVDIFKEGQVVDVRGLTRGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRHNF ATHG S+SHR+ GS G Q PGRV+K KKMAG++G TV++ E+ Sbjct: 121 FAGTVKRHNFRTQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGQLGNVYCTVQSQEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + VD +R L+L+KG +PGA I+ + S K Sbjct: 181 IKVDVERNLLLIKGALPGAPGGEVIITQSSKKR 213 >gi|306832547|ref|ZP_07465687.1| 50S ribosomal protein L3 [Streptococcus bovis ATCC 700338] gi|304425305|gb|EFM28431.1| 50S ribosomal protein L3 [Streptococcus bovis ATCC 700338] Length = 208 Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG + + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGQEITVNTFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLEVV Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAA 207 >gi|50913439|ref|YP_059411.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS10394] gi|73917496|sp|Q5XED5|RL3_STRP6 RecName: Full=50S ribosomal protein L3 gi|50902513|gb|AAT86228.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10394] Length = 208 Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 95/213 (44%), Positives = 132/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ S F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVTV+NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +ILVKG VPGAKK S I ++ + K+A Sbjct: 176 QVILEKNVILVKGNVPGAKK-SLITIKSAVKAA 207 >gi|88854682|ref|ZP_01129348.1| 50S ribosomal protein L3 [marine actinobacterium PHSC20C1] gi|88815843|gb|EAR25699.1| 50S ribosomal protein L3 [marine actinobacterium PHSC20C1] Length = 216 Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 92/212 (43%), Positives = 130/212 (61%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 G++ +KLGMT V++ + +PVTV+ + V RT + +GY AVQ+ G+ + V Sbjct: 7 TKGLLGKKLGMTQVWDENNKLVPVTVVEITPNVVTQLRTPEVDGYSAVQIAYGQIDPRKV 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G F V+P++ + E R D VG + FT G VDV G + GKGF+ Sbjct: 67 NKPLTGHFDKAGVTPRRHITEIRTSDAAD-YTVGQELAVDIFTPGSKVDVVGTSKGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF G+ A+HG +HR GS G P RVFK +MAGRMGG+RVTV NL V + Sbjct: 126 GVMKRHNFKGVSASHGSHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGDRVTVMNLAVHA 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +D ++GL+L+KG VPGA + + VR++ K A Sbjct: 186 IDLEKGLVLIKGAVPGA-RGRIVFVRNAVKGA 216 >gi|323141356|ref|ZP_08076247.1| 50S ribosomal protein L3 [Phascolarctobacterium sp. YIT 12067] gi|322414105|gb|EFY04933.1| 50S ribosomal protein L3 [Phascolarctobacterium sp. YIT 12067] Length = 213 Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 93/214 (43%), Positives = 132/214 (61%), Gaps = 5/214 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT ++ +GR IPVTV+ C V+ ++T + +GY AVQ+G GE K K+ Sbjct: 1 MAKGILGKKLGMTQIFEADGRLIPVTVVEAGPCVVLQNKTEETDGYNAVQLGFGEIKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KPM+G F V+P K + E R+ + VG + F G+L+D +G++ GKGF Sbjct: 61 TTKPMKGHFDKAGVTPVKFVRELRLAAPSE-YAVGDKIAADIFAAGELIDASGVSRGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KRHNF HG S SHR GS G GRV K KK+ GRMG VTV+ L Sbjct: 120 AGTIKRHNFSRGPMKHG-SKSHREPGSMGPMHSGPGGRVIKGKKLPGRMGNANVTVQRLT 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VV VD +R LILVKG +PGA S+++++++ K Sbjct: 179 VVKVDAERNLILVKGAIPGA-TGSYVVLKETVKP 211 >gi|56477594|ref|YP_159183.1| 50S ribosomal protein L3 [Aromatoleum aromaticum EbN1] gi|81821104|sp|Q5P332|RL3_AZOSE RecName: Full=50S ribosomal protein L3 gi|56313637|emb|CAI08282.1| 50S ribosomal protein L3 [Aromatoleum aromaticum EbN1] Length = 214 Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 100/213 (46%), Positives = 131/213 (61%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +GR +PVTVL + N +V +T + +GY AVQV G+ + Sbjct: 1 MSLGLVGRKVGMTRIFAEDGRSVPVTVLDVSNNRVTQIKTPESDGYAAVQVTFGKRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQ-KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V KP+ G + V L EFRV+ + G V F VGQ VDVTG +IGKG Sbjct: 61 VGKPLAGHLAKAGVEAGHMLKEFRVETEQVAGFKAGDVVGVDLFAVGQKVDVTGTSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG KRHNF RA+HG S+SH + GS G QDPGRVF K+MAG+ G T + LEV Sbjct: 121 FSGVGKRHNFSSNRASHGNSVSHNAPGSIGMAQDPGRVFPGKRMAGQYGNTTCTTQGLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LVKG VPG+ K ++VR + K+ Sbjct: 181 VRVDVERQLLLVKGAVPGS-KGGDVIVRPAVKA 212 >gi|159901426|ref|YP_001547673.1| 50S ribosomal protein L3 [Herpetosiphon aurantiacus ATCC 23779] gi|226726278|sp|A9B412|RL3_HERA2 RecName: Full=50S ribosomal protein L3 gi|159894465|gb|ABX07545.1| ribosomal protein L3 [Herpetosiphon aurantiacus ATCC 23779] Length = 212 Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats. Identities = 96/215 (44%), Positives = 133/215 (61%), Gaps = 3/215 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M +G++ RK+GMT ++ +G IPVTV+ C V RT DK+GY AVQ+G GE K + Sbjct: 1 MLNGILGRKIGMTQIFTEKGETIPVTVIEAGPCVVTQLRTKDKDGYEAVQLGFGEIKPRK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G + + D + VG V + F +G+ +DV G + G+GF Sbjct: 61 VTKPIQGHLKAAGRLVRFMRE--VKTTDLNAHNVGDVVNVDIFQIGEKIDVVGTSKGRGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH F G ATHG S HR+ GS G PGRV+KN +MAGRMG +RVTV+NLEVV Sbjct: 119 AGVVKRHGFRGGPATHGQSDRHRAPGSIGSGTTPGRVWKNMRMAGRMGNDRVTVQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +D +R +ILVKG VPGA KN ++V + K+ Sbjct: 179 KIDLERHVILVKGSVPGA-KNGLVMVSRAAKATKK 212 >gi|311744809|ref|ZP_07718605.1| 50S ribosomal protein L3 [Aeromicrobium marinum DSM 15272] gi|311311926|gb|EFQ81847.1| 50S ribosomal protein L3 [Aeromicrobium marinum DSM 15272] Length = 222 Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats. Identities = 93/212 (43%), Positives = 130/212 (61%), Gaps = 2/212 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT V++ + R +PVTV+ D V RT + +GY AVQ+G GE + V+K Sbjct: 11 GLLGRKLGMTQVWDADNRVVPVTVIAADTNVVTQIRTRETDGYSAVQLGFGEIDGRKVNK 70 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ + E R + D +G SP F G +VDVTG + GKGF+G Sbjct: 71 PQSGHFDKAGVTPRRHVVEIRTEAIAD-YTLGQEISPEIFAAGDVVDVTGTSKGKGFAGV 129 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G+ A+HG +HR GS G PGRVFK +MAG MG ++VT +NL V +VD Sbjct: 130 MKRHGFHGVGASHGAHRNHRKPGSIGGCATPGRVFKGLRMAGHMGTDQVTTQNLTVHAVD 189 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++G+IL+KG VPG K +++R + K Sbjct: 190 LEKGVILIKGAVPGP-KGQLVVIRSAAKRIAK 220 >gi|118595335|ref|ZP_01552682.1| 50S ribosomal protein L3 [Methylophilales bacterium HTCC2181] gi|118441113|gb|EAV47740.1| 50S ribosomal protein L3 [Methylophilales bacterium HTCC2181] Length = 216 Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats. Identities = 100/212 (47%), Positives = 135/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ EG IPVTVL + +V + ++ +GY ++Q+ G +K Sbjct: 1 MSLGLIGRKVGMTRVFTDEGASIPVTVLEVVPNRVTQIKKINSDGYSSLQLAYGRSKSTK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++K + G ++ +V L E R+ +++ S S F VGQ VDVTG TIGKG Sbjct: 61 LNKSLVGHYAKASVEAGLGLHELRLSEEEISNYTNESSLSVEIFQVGQKVDVTGTTIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KRH+F RATHGVSISH SHGSTG QDPGRVF KKMAG +G + T +NLEV Sbjct: 121 FQGPIKRHHFSSNRATHGVSISHNSHGSTGQCQDPGRVFPGKKMAGHLGDKKRTTQNLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V +D R LIL+KG VPG+ K S +L+R + K Sbjct: 181 VRIDSPRNLILIKGAVPGS-KGSDVLIRPAVK 211 >gi|22297625|ref|NP_680872.1| 50S ribosomal protein L3 [Thermosynechococcus elongatus BP-1] gi|42559634|sp|Q8DMN1|RL3_THEEB RecName: Full=50S ribosomal protein L3 gi|22293802|dbj|BAC07634.1| 50S ribosomal protein L3 [Thermosynechococcus elongatus BP-1] Length = 212 Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats. Identities = 87/210 (41%), Positives = 125/210 (59%), Gaps = 3/210 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT +++ GR +P+TV+ C + +T +GY A+QV GE + KN Sbjct: 1 MTVGILGTKLGMTQIFDEAGRSVPITVVQAGPCPITQIKTPQTDGYTAIQVAYGEVREKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +S+P RG + P + L EFR+ +D +G + F+ GQLVDV G +IG+GF Sbjct: 61 LSRPERGHLNKSQTPPMRHLREFRL-EDVSAYQLGQAITVDIFSPGQLVDVRGTSIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRHNF HG S +HR GSTG PGRVF K+MAGRMG VT++ L+V+ Sbjct: 120 AGYQKRHNFKRGPMAHG-SKNHRLPGSTGAGTTPGRVFPGKRMAGRMGNTAVTIRKLQVM 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 VD +R LIL+KG +PG + + + + Sbjct: 179 RVDPERNLILIKGALPGKP-GALVSITPAK 207 >gi|118591184|ref|ZP_01548583.1| 50S ribosomal protein L3 [Stappia aggregata IAM 12614] gi|118436260|gb|EAV42902.1| 50S ribosomal protein L3 [Stappia aggregata IAM 12614] Length = 225 Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats. Identities = 124/204 (60%), Positives = 152/204 (74%), Gaps = 2/204 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT +YN G +PVTVL L+NCQVV HRT +KNGY A+Q+GAG KVKN K +RG F+ Sbjct: 1 MTRIYNDAGEHVPVTVLRLENCQVVAHRTDEKNGYTALQLGAGTRKVKNTPKALRGHFAV 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 V PK+ + EFRV + +L+ VG+ + ++ GQ VDVTG +IGKGF+GAMKRHNFGG Sbjct: 61 AKVEPKRTVAEFRVSAE-NLIDVGAELTADHYVEGQFVDVTGTSIGKGFAGAMKRHNFGG 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 RA+HG S+SHRSHGSTG QDPGRVFK KKMAG MG RVT +NL+VV D +RGLI+V Sbjct: 120 GRASHGNSVSHRSHGSTGQCQDPGRVFKGKKMAGHMGDARVTTQNLKVVRTDVERGLIMV 179 Query: 192 KGCVPGAKKNSWILVRDSFKSAVN 215 +G VPGA K WILVRD+ K A+ Sbjct: 180 EGSVPGA-KGGWILVRDAIKKALP 202 >gi|227549826|ref|ZP_03979875.1| 50S ribosomal protein L3 [Corynebacterium lipophiloflavum DSM 44291] gi|227078081|gb|EEI16044.1| 50S ribosomal protein L3 [Corynebacterium lipophiloflavum DSM 44291] Length = 218 Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats. Identities = 87/214 (40%), Positives = 122/214 (57%), Gaps = 2/214 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT +++ + R IPVTV+ V RT + +GY A+Q+ G+ + Sbjct: 7 KGILGTKLGMTQIFDEDNRVIPVTVVEAGPVVVTQIRTAETDGYSAIQIAYGDIDPRKTK 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P++ + E R+ D VG F+ + F VDV G T GKG++G Sbjct: 67 KPQAGHFKKAGVNPRRHVAEIRMD-DTSAYEVGQEFNATIFDGDTYVDVVGTTKGKGYAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRH F G A+HG +HR GS G PGRVFK +MAGRMG NRVT +NL++ + Sbjct: 126 AMKRHGFAGQGASHGNQAAHRRVGSIGACATPGRVFKGTRMAGRMGSNRVTTQNLKIQRI 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D LIL+KG +PG K S + V+ + K + Sbjct: 186 DGDNNLILIKGAIPGV-KGSIVTVKTAVKGGAHA 218 >gi|325510539|gb|ADZ22175.1| 50S ribosomal protein L3 [Clostridium acetobutylicum EA 2018] Length = 210 Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats. Identities = 89/212 (41%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +KLGMT ++N EG+ +PVTV+ C V+ +T +K GY A+QVG G + K Sbjct: 2 MKKGILGKKLGMTQIFNEEGKVVPVTVIEAGPCVVIQKKTSEKEGYDAIQVGFGTIREKL 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F+ NV K+ + EFR+ +D VG+ F G+ VDV+G++ GKGF Sbjct: 62 VNKPLKGHFAKGNVELKRFVKEFRL-EDTSSYEVGAEIKADIFAAGEKVDVSGVSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G ++R +HG S HR+ GS G DP R FK+KKM G MG TV N+EV Sbjct: 121 QGTIRRWGAHRGPMSHG-SKFHRAVGSMGGSSDPSRTFKSKKMPGHMGHVNTTVLNVEVA 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ LIL+KG VPG K S++++++S K+ Sbjct: 180 KVIPEKNLILIKGGVPGPNK-SFVVIKNSVKA 210 >gi|167564417|ref|ZP_02357333.1| 50S ribosomal protein L3 [Burkholderia oklahomensis EO147] gi|167571563|ref|ZP_02364437.1| 50S ribosomal protein L3 [Burkholderia oklahomensis C6786] Length = 219 Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats. Identities = 97/212 (45%), Positives = 130/212 (61%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR+ L G++ P F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D R L+LVKG VPGA K + V + K Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211 >gi|119963305|ref|YP_948657.1| 50S ribosomal protein L3 [Arthrobacter aurescens TC1] gi|171704615|sp|A1R8U5|RL3_ARTAT RecName: Full=50S ribosomal protein L3 gi|119950164|gb|ABM09075.1| ribosomal protein L3 [Arthrobacter aurescens TC1] Length = 216 Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats. Identities = 89/211 (42%), Positives = 125/211 (59%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ + IPVTV+ D+ + R + +GY+AVQ+G G+ + V+ Sbjct: 8 KGLLGTKLGMTQVWDENNKLIPVTVVQADSNVITQLRNAEVDGYVAVQIGYGQIDPRKVT 67 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F V+P++ + E R D +G S F GQ +DV G + GKGF+G Sbjct: 68 KPLAGHFEKAGVTPRRHVVELR-TADAASYELGQELSVEIFEAGQKIDVVGTSKGKGFAG 126 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G P RVFK KMAGRMG R T NL V ++ Sbjct: 127 VMKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGLKMAGRMGAERHTTLNLTVHAI 186 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++ L+L+KG VPGA + +LVR + K A Sbjct: 187 DAEKSLLLIKGAVPGA-RGQVVLVRTAVKGA 216 >gi|50955566|ref|YP_062854.1| 50S ribosomal protein L3 [Leifsonia xyli subsp. xyli str. CTCB07] gi|81826588|sp|Q6ACZ5|RL3_LEIXX RecName: Full=50S ribosomal protein L3 gi|50952048|gb|AAT89749.1| 50S ribosomal protein L3 [Leifsonia xyli subsp. xyli str. CTCB07] Length = 219 Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats. Identities = 94/211 (44%), Positives = 127/211 (60%), Gaps = 3/211 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT V++ IPVTV+ + V RT + +GY AVQ+ G+ + V+K Sbjct: 11 GLLGKKLGMTQVWDENDTLIPVTVIEITPNVVTQVRTPEADGYNAVQIAYGQIDRRKVNK 70 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSG 122 P G F V+P++ L E R D G + F GQLVDV G + KGF+G Sbjct: 71 PSAGHFDKAGVTPRRHLTEVR-TADAAEYSAGQELTVDGTFEAGQLVDVVGTSKSKGFAG 129 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF G+ A+HG +HR GS G P RVFK +MAGRMGG RVTV NL+V ++ Sbjct: 130 VMKRHNFQGVSASHGAHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGERVTVLNLKVQAI 189 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+LVKG VPGA + + VR++ K A Sbjct: 190 DAEKGLLLVKGAVPGA-RGRIVFVRNAVKGA 219 >gi|22536243|ref|NP_687094.1| 50S ribosomal protein L3 [Streptococcus agalactiae 2603V/R] gi|25010133|ref|NP_734528.1| 50S ribosomal protein L3 [Streptococcus agalactiae NEM316] gi|76786764|ref|YP_328784.1| 50S ribosomal protein L3 [Streptococcus agalactiae A909] gi|76798231|ref|ZP_00780481.1| ribosomal protein L3 [Streptococcus agalactiae 18RS21] gi|77406990|ref|ZP_00784005.1| ribosomal protein L3 [Streptococcus agalactiae H36B] gi|77412293|ref|ZP_00788609.1| ribosomal protein L3 [Streptococcus agalactiae CJB111] gi|42559639|sp|Q8E2D1|RL3_STRA5 RecName: Full=50S ribosomal protein L3 gi|42559641|sp|Q8E7T8|RL3_STRA3 RecName: Full=50S ribosomal protein L3 gi|109893560|sp|Q3K3W9|RL3_STRA1 RecName: Full=50S ribosomal protein L3 gi|22533063|gb|AAM98966.1|AE014194_11 ribosomal protein L3 [Streptococcus agalactiae 2603V/R] gi|23094484|emb|CAD45703.1| ribosomal protein L3 [Streptococcus agalactiae NEM316] gi|76561821|gb|ABA44405.1| ribosomal protein L3 [Streptococcus agalactiae A909] gi|76586440|gb|EAO62948.1| ribosomal protein L3 [Streptococcus agalactiae 18RS21] gi|77161683|gb|EAO72678.1| ribosomal protein L3 [Streptococcus agalactiae CJB111] gi|77174395|gb|EAO77249.1| ribosomal protein L3 [Streptococcus agalactiae H36B] gi|319743995|gb|EFV96375.1| 50S ribosomal protein L3 [Streptococcus agalactiae ATCC 13813] Length = 208 Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats. Identities = 93/213 (43%), Positives = 132/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ S F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVTV+NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ ++L+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVVLIKGNVPGAKK-SLITIKSAVKAA 207 >gi|294101628|ref|YP_003553486.1| 50S ribosomal protein L3 [Aminobacterium colombiense DSM 12261] gi|293616608|gb|ADE56762.1| 50S ribosomal protein L3 [Aminobacterium colombiense DSM 12261] Length = 208 Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats. Identities = 105/206 (50%), Positives = 135/206 (65%), Gaps = 2/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RKLGMT +YN G+ +PVTV+ C VV +T +KNGY AVQ+G GE K Sbjct: 1 MSIGILGRKLGMTQIYNEAGQAVPVTVIQAGPCPVVSLKTPEKNGYSAVQLGFGEIKPHK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP++G F +V P++ L EFR+ VG + S F G+ ++V GM+ GKGF Sbjct: 61 LTKPVKGQFDKASVEPQRYLREFRLDNVKG-YEVGQAITVSLFEEGEKINVVGMSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGG ATHGVS +HR GS+G PG++FK K M GRMGG RVTVKNL VV Sbjct: 120 AGVMKRFNFGGTFATHGVSKTHRHGGSSGASSYPGKIFKGKAMPGRMGGERVTVKNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 +VD L+LVKG VPGA KN + V Sbjct: 180 AVDTDNNLLLVKGAVPGA-KNDIVTV 204 >gi|289435898|ref|YP_003465770.1| hypothetical protein lse_2537 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172142|emb|CBH28688.1| rplC [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 209 Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats. Identities = 85/212 (40%), Positives = 128/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY AVQ+G + + K Sbjct: 1 MTKGILGRKVGMTQVFTENGELIPVTVIEAAQNVVLQKKTVETDGYEAVQIGFEDKRAKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EFR + D +G+ F G ++D TG++ GKGF Sbjct: 61 SNKPEQGHVAKANTTPKRFIREFR-DVNLDEYEIGAEVKVDVFAEGDIIDATGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK + GRMGG ++T++NLE+V Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQITIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++ ++LVKG VPGAKK + + ++ + K+ Sbjct: 178 KVDVEKNVLLVKGNVPGAKK-ALVQIKTATKA 208 >gi|15896383|ref|NP_349732.1| 50S ribosomal protein L3 [Clostridium acetobutylicum ATCC 824] gi|42559679|sp|Q97EH8|RL3_CLOAB RecName: Full=50S ribosomal protein L3 gi|15026199|gb|AAK81072.1|AE007808_25 Ribosomal protein L3 [Clostridium acetobutylicum ATCC 824] Length = 209 Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats. Identities = 89/212 (41%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +KLGMT ++N EG+ +PVTV+ C V+ +T +K GY A+QVG G + K Sbjct: 1 MKKGILGKKLGMTQIFNEEGKVVPVTVIEAGPCVVIQKKTSEKEGYDAIQVGFGTIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F+ NV K+ + EFR+ +D VG+ F G+ VDV+G++ GKGF Sbjct: 61 VNKPLKGHFAKGNVELKRFVKEFRL-EDTSSYEVGAEIKADIFAAGEKVDVSGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G ++R +HG S HR+ GS G DP R FK+KKM G MG TV N+EV Sbjct: 120 QGTIRRWGAHRGPMSHG-SKFHRAVGSMGGSSDPSRTFKSKKMPGHMGHVNTTVLNVEVA 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ LIL+KG VPG K S++++++S K+ Sbjct: 179 KVIPEKNLILIKGGVPGPNK-SFVVIKNSVKA 209 >gi|308446847|ref|XP_003087274.1| hypothetical protein CRE_26933 [Caenorhabditis remanei] gi|308258134|gb|EFP02087.1| hypothetical protein CRE_26933 [Caenorhabditis remanei] Length = 218 Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats. Identities = 95/212 (44%), Positives = 133/212 (62%), Gaps = 3/212 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ G+ +PVTV+ + V RT + +GY AVQ+ AG+ + V+ Sbjct: 9 KGLLGTKLGMTQVWDENGKVVPVTVIEVAPNVVTQIRTAEVDGYSAVQIAAGQIDPRKVN 68 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFS 121 +P G F+ V+P++ L E R D +G + F GQ +DV G + GKGF+ Sbjct: 69 QPTAGHFAKAGVTPRRHLTEVR-TADAADYSLGQELTIDGTFEAGQKIDVVGTSKGKGFA 127 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF G+ A+HG +HR GS G PGRVFK ++MAGRMGG RVTV+NL V + Sbjct: 128 GVMKRHNFSGVSASHGAHRNHRKPGSIGGAATPGRVFKGQRMAGRMGGERVTVQNLTVHA 187 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD ++GLIL+KG VPGA + + VR++ K A Sbjct: 188 VDAEKGLILIKGAVPGA-RGRLVFVRNAVKGA 218 >gi|295677932|ref|YP_003606456.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1002] gi|295437775|gb|ADG16945.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1002] Length = 219 Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats. Identities = 96/212 (45%), Positives = 130/212 (61%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EF++ L G+V P F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVQAGEILKEFQIDAAKAAELSSGTVVGPELFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG +VTV+NLE+ Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDEKVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D R L+LVKG VPGA K + V + K Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211 >gi|254468609|ref|ZP_05082015.1| ribosomal protein L3 [beta proteobacterium KB13] gi|207087419|gb|EDZ64702.1| ribosomal protein L3 [beta proteobacterium KB13] Length = 216 Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats. Identities = 98/213 (46%), Positives = 133/213 (62%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G +PVTVL + +V + +D NGY +QV G +K Sbjct: 1 MSLGLVGRKVGMTRLFTEDGNSVPVTVLEVVPNKVTQIKKIDDNGYNGLQVSYGNSKSSK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++K ++G + V L EFRV D+ + +G S F GQ VD+TG TIGKG Sbjct: 61 LNKSIKGHLAKAGVDSIDGLKEFRVTGDELNNFQLGGELKVSIFEAGQKVDITGTTIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KRH+FG RATHG SISH + GSTG QDPGRVFK KKMAG MG T +NLEV Sbjct: 121 FQGGIKRHHFGSQRATHGNSISHNAPGSTGMCQDPGRVFKGKKMAGHMGAVTRTTQNLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + VD+ R LI++KG VPG+ S + ++ + K+ Sbjct: 181 IRVDENRNLIMIKGAVPGSS-GSNVTIKPAVKA 212 >gi|167587772|ref|ZP_02380160.1| ribosomal protein L3 [Burkholderia ubonensis Bu] gi|325529678|gb|EGD06541.1| 50S ribosomal protein L3 [Burkholderia sp. TJI49] Length = 216 Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats. Identities = 96/212 (45%), Positives = 131/212 (61%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR+ L G++ P F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D +R L+LVKG +PGA K + V + K Sbjct: 181 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVK 211 >gi|83949796|ref|ZP_00958529.1| Ribosomal protein L3 [Roseovarius nubinhibens ISM] gi|83837695|gb|EAP76991.1| Ribosomal protein L3 [Roseovarius nubinhibens ISM] Length = 268 Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats. Identities = 122/204 (59%), Positives = 148/204 (72%), Gaps = 2/204 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++ +G++IPVTVL LD QVV RT + +GY AVQ+GAG K K VSK MRG FS Sbjct: 1 MTRLFMEDGKQIPVTVLQLDKLQVVAQRTPEAHGYSAVQLGAGSIKAKRVSKAMRGHFSI 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 V PK+K+ EFRV + +L+ VG + ++ GQ VDV+G +IGKGF+GAMKRHNFGG Sbjct: 61 AKVEPKRKIAEFRVAPE-NLINVGEEITADHYFEGQFVDVSGTSIGKGFAGAMKRHNFGG 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 LRATHGVSISHRSHGSTG QDPGRVFK KKMAG MG RVT +NL+VV D RGLI+V Sbjct: 120 LRATHGVSISHRSHGSTGQCQDPGRVFKGKKMAGHMGAARVTTQNLQVVKTDADRGLIMV 179 Query: 192 KGCVPGAKKNSWILVRDSFKSAVN 215 KG VPG+ K W+ V+D+ K Sbjct: 180 KGAVPGS-KGGWVTVKDAVKKPFP 202 >gi|156743948|ref|YP_001434077.1| 50S ribosomal protein L3 [Roseiflexus castenholzii DSM 13941] gi|189029477|sp|A7NR63|RL3_ROSCS RecName: Full=50S ribosomal protein L3 gi|156235276|gb|ABU60059.1| ribosomal protein L3 [Roseiflexus castenholzii DSM 13941] Length = 210 Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats. Identities = 94/213 (44%), Positives = 129/213 (60%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V++ G+ IPVT++ + C V RT +++GY AVQ+G E + K+ Sbjct: 1 MIEGLLGRKIGMTQVFDPTGQVIPVTIIEVGPCVVTQIRTKERDGYEAVQIGYQEVRAKS 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + L EFR D VG V + F GQ VDV G + G+GF Sbjct: 61 LTKPEQGHLRGAG-KLLRHLREFRTDNIADH-KVGDVLTVEMFAPGQRVDVIGTSKGRGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH FGG THG S R+ GS G DPG ++KN +MAGRMG RVTV+NL VV Sbjct: 119 QGVVKRHGFGGGPRTHGQSDRLRAPGSIGAGTDPGHLWKNTRMAGRMGNQRVTVQNLTVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V +R L+LV+G VPGA N ++VR + K + Sbjct: 179 DVVPERNLLLVRGSVPGAN-NGLVMVRRAIKGS 210 >gi|169335629|ref|ZP_02862822.1| hypothetical protein ANASTE_02049 [Anaerofustis stercorihominis DSM 17244] gi|169258367|gb|EDS72333.1| hypothetical protein ANASTE_02049 [Anaerofustis stercorihominis DSM 17244] Length = 216 Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats. Identities = 91/213 (42%), Positives = 127/213 (59%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A+K+GMT V++ G IPVTVL C V+ +T++K+GY AVQ+G GE KN Sbjct: 6 MKKAIMAKKVGMTQVFSETGEVIPVTVLQAGPCYVLQVKTVEKDGYEAVQLGYGEINEKN 65 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F V P +K+ EFR D G+ F G +D+TG++ GKGF Sbjct: 66 VNKPLKGHFEKAGVKPVRKIKEFRFD-DCSGYETGNEIKADVFEAGDKIDITGVSKGKGF 124 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S SHR G+ PGRV K K M G MG +VTV+NL VV Sbjct: 125 QGAIKRHGQSRGPMGHG-SKSHRVVGAMSGASYPGRVMKGKNMPGHMGSEKVTVQNLTVV 183 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D++ ++LVKG VPG+ S + + DS K++ Sbjct: 184 KADNENNMLLVKGAVPGSN-GSIVTITDSIKAS 215 >gi|153816252|ref|ZP_01968920.1| hypothetical protein RUMTOR_02501 [Ruminococcus torques ATCC 27756] gi|145846435|gb|EDK23353.1| hypothetical protein RUMTOR_02501 [Ruminococcus torques ATCC 27756] Length = 242 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 87/229 (37%), Positives = 123/229 (53%), Gaps = 20/229 (8%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV- 58 M+ ++A K+GMT ++N +G IPVTVL C V +T++ +GY AVQVG + K Sbjct: 16 MKKAILATKVGMTQIFNHEDGVLIPVTVLQAGPCVVTQVKTVENDGYSAVQVGYVDKKDK 75 Query: 59 ---------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103 V+K +G F VS K+ + EFR ++ + F Sbjct: 76 IVTKDGSGRKAIAHRNGVTKAEKGHFDKAGVSGKRYVKEFRFDNAEE-YALAQEIKADIF 134 Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 G +D T ++ GKGF GA+KRH THG S HR GS G DP +VFK KKM Sbjct: 135 AEGDHIDATAISKGKGFQGAIKRHGQSRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKM 193 Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G+MG ++TV+NLE+V VD + L+LVKG VPG KK + ++++ K Sbjct: 194 PGQMGNKKITVQNLEIVRVDAENNLLLVKGSVPGPKK-CLVTIKETVKG 241 >gi|169830030|ref|YP_001700188.1| 50S ribosomal protein L3 [Lysinibacillus sphaericus C3-41] gi|226730531|sp|B1HMY0|RL3_LYSSC RecName: Full=50S ribosomal protein L3 gi|168994518|gb|ACA42058.1| 50S ribosomal protein L3 [Lysinibacillus sphaericus C3-41] Length = 209 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 128/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+QVG + +VK Sbjct: 1 MAKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTVETDGYEAIQVGFEDKRVKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EFR + + VG F G ++DVTG+T GKGF Sbjct: 61 SNKPQQGHVAKANTAPKRFIREFR-NVNVEEYEVGQEVKVEIFAEGDVIDVTGVTKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFK KK+ G+MGGN VT++NLE+V Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKQKKLPGQMGGNVVTIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD R L+LVKG VPG+KK + + V+ + K+ Sbjct: 178 KVDTDRNLLLVKGNVPGSKK-ALVTVKTASKA 208 >gi|296875404|ref|ZP_06899478.1| 50S ribosomal protein L3 [Streptococcus parasanguinis ATCC 15912] gi|312866990|ref|ZP_07727201.1| 50S ribosomal protein L3 [Streptococcus parasanguinis F0405] gi|319945835|ref|ZP_08020085.1| 50S ribosomal protein L3 [Streptococcus australis ATCC 700641] gi|296433597|gb|EFH19370.1| 50S ribosomal protein L3 [Streptococcus parasanguinis ATCC 15912] gi|311097472|gb|EFQ55705.1| 50S ribosomal protein L3 [Streptococcus parasanguinis F0405] gi|319747900|gb|EFW00144.1| 50S ribosomal protein L3 [Streptococcus australis ATCC 700641] Length = 208 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 89/213 (41%), Positives = 129/213 (60%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNVEGLEVGAEITVDTFEAGDIVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFK K +AGRMGG+RVT++NLEVV Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+ Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAG 207 >gi|330815249|ref|YP_004358954.1| 50S ribosomal protein L3 [Burkholderia gladioli BSR3] gi|327367642|gb|AEA58998.1| 50S ribosomal protein L3 [Burkholderia gladioli BSR3] Length = 216 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 96/212 (45%), Positives = 130/212 (61%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR+ L G++ P F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEVLKEFRIDAAKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RATHG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 121 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D +R L+LVKG +PGA K + V + K Sbjct: 181 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVK 211 >gi|297571935|ref|YP_003697709.1| 50S ribosomal protein L3 [Arcanobacterium haemolyticum DSM 20595] gi|296932282|gb|ADH93090.1| 50S ribosomal protein L3 [Arcanobacterium haemolyticum DSM 20595] Length = 222 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 87/211 (41%), Positives = 125/211 (59%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 ++ KLGMT V++ + +PVTV+ + V RT + +GY AVQ+ +GE K KNV+ Sbjct: 14 KALLGIKLGMTQVWDENAKLVPVTVVRVGKNVVTQVRTPEIDGYSAVQIASGELKAKNVT 73 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F V P++ + E R D + +G F GQ +DV G + GKGF+G Sbjct: 74 KPLKGHFEKAGVEPRRHVAEIR-TVDAEDYTLGQELGVETFEAGQTIDVIGKSKGKGFAG 132 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G P RVF+ +MAGRMG RVTV+NL + ++ Sbjct: 133 VMKRHGFAGVSASHGAHRNHRKPGSIGACSTPSRVFRGMRMAGRMGNARVTVQNLTIHAI 192 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + LILV G +PG K +++R + K A Sbjct: 193 DTENNLILVSGAIPG-NKGGVVVIRTAVKGA 222 >gi|229829429|ref|ZP_04455498.1| hypothetical protein GCWU000342_01519 [Shuttleworthia satelles DSM 14600] gi|229791860|gb|EEP27974.1| hypothetical protein GCWU000342_01519 [Shuttleworthia satelles DSM 14600] Length = 227 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 89/229 (38%), Positives = 122/229 (53%), Gaps = 19/229 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58 M ++A K+GMT ++N +G IPVTVL C V +TL+ +GY AVQVG + K Sbjct: 1 MNKAILATKVGMTQIFNEDGVLIPVTVLQAGPCAVTQVKTLENDGYEAVQVGFVDKKDKI 60 Query: 59 --------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V+KP++G F+ V KK + EFR + + +G F Sbjct: 61 NTKDAAGRKEVHHRHGVNKPLKGHFAKAGVEGKKYVREFRFENASE-YKLGDEIKADIFA 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G VD T ++ GKGF GA+KR HG S HR GS G DP +VFK K M Sbjct: 120 EGDKVDATAISKGKGFQGAIKRLGQHRGPMAHG-SKFHRHQGSNGAASDPSKVFKGKGMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 G MG +VT++NLEVV VD + L+L+KG VPG K S + +++S K+ Sbjct: 179 GHMGSVKVTIQNLEVVKVDAENNLLLIKGAVPGP-KRSLVTIKESVKAG 226 >gi|302558994|ref|ZP_07311336.1| 50S ribosomal protein L3 [Streptomyces griseoflavus Tu4000] gi|302476612|gb|EFL39705.1| 50S ribosomal protein L3 [Streptomyces griseoflavus Tu4000] Length = 214 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 96/211 (45%), Positives = 127/211 (60%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ GE + V+ Sbjct: 6 KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 66 KPLKGHFAKADVTPRRHLVEIRTS-DASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+L+KG VPG +LVR + K A Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214 >gi|261367803|ref|ZP_05980686.1| 50S ribosomal protein L3 [Subdoligranulum variabile DSM 15176] gi|282570601|gb|EFB76136.1| 50S ribosomal protein L3 [Subdoligranulum variabile DSM 15176] Length = 210 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +KLGMT +++ G+ +PVT++ C VV +T++ +GY AVQ+G GE K Sbjct: 1 MQKGIIGKKLGMTQLFDANGKVVPVTIIEAGPCTVVQKKTVESDGYQAVQMGYGEVSAKK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K +G F +V+PK+ L EFR D L VG + F G VDV G + GKG+ Sbjct: 61 VNKAAKGHFDKADVAPKRTLREFRFD-DIASLNVGDILKADVFAEGDKVDVVGTSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR LR +HG R GS G P RVFK K++ G MG RVTV+NL VV Sbjct: 120 QGVIKRFGQHRLRESHGTGPVARHAGSNGSTSTPSRVFKGKRLPGHMGAVRVTVQNLSVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + LI +KG +PG K S + + DS K+ Sbjct: 180 KVDAENNLIAIKGAIPGP-KGSVVTIHDSVKA 210 >gi|209884813|ref|YP_002288670.1| ribosomal protein L3 [Oligotropha carboxidovorans OM5] gi|226730542|sp|B6JET3|RL3_OLICO RecName: Full=50S ribosomal protein L3 gi|209873009|gb|ACI92805.1| ribosomal protein L3 [Oligotropha carboxidovorans OM5] Length = 243 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 127/218 (58%), Positives = 156/218 (71%), Gaps = 2/218 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GM V+ G IPVTVL L NCQVV HRT DKNGY A+Q+GAG K Sbjct: 1 MRSGVIAQKVGMMRVFTEAGEHIPVTVLKLGNCQVVGHRTKDKNGYTALQLGAGARKSVY 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + K RG F+ V PK+K+ EFRV +D ++PVG+ +F VGQ VDVTG +IGKG+ Sbjct: 61 MPKAERGQFAVAKVEPKRKVAEFRVSED-AIIPVGAEIQADHFVVGQFVDVTGTSIGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T NL VV Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 D +RGL+LV+G VPG+ K WI VRD+ K + + Sbjct: 180 QTDVERGLLLVEGAVPGS-KGGWITVRDAVKKPLPKEA 216 >gi|307731255|ref|YP_003908479.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1003] gi|323527602|ref|YP_004229755.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1001] gi|307585790|gb|ADN59188.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1003] gi|323384604|gb|ADX56695.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1001] Length = 219 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 96/212 (45%), Positives = 129/212 (60%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGTRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EF++ L G+V P F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVQAGEILKEFQIDAAKAAELSNGAVVGPDLFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 121 YAGTIKRYNFASGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D R L+LVKG VPGA K + V + K Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211 >gi|38233085|ref|NP_938852.1| 50S ribosomal protein L3 [Corynebacterium diphtheriae NCTC 13129] gi|42559574|sp|P60453|RL3_CORDI RecName: Full=50S ribosomal protein L3 gi|38199344|emb|CAE48977.1| 50S ribosomal protein L3 [Corynebacterium diphtheriae] Length = 218 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 85/214 (39%), Positives = 121/214 (56%), Gaps = 2/214 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT +++ + R IPVTV+ C V RT++ +GY A+Q+ GE + + Sbjct: 7 KGILGTKLGMTQIFDEDNRVIPVTVVEAGPCVVTQIRTVETDGYNAIQIAYGEIDPRKAN 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P++ + E R+ D +G + F VDVTG T GKG++G Sbjct: 67 KPAAGHFKKAGVTPRRHVAEIRMD-DVSGYELGQDVTVEIFEGINFVDVTGTTKGKGYAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRH F G A HG +HR G G PGRVFK +MAGRMG +RVT +NL+V + Sbjct: 126 AMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGSDRVTTQNLKVQKI 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D LIL+KG +PG + + V+ + K + Sbjct: 186 DADANLILIKGAIPGV-RGGIVTVKTAVKGGAHA 218 >gi|91785465|ref|YP_560671.1| 50S ribosomal protein L3 [Burkholderia xenovorans LB400] gi|187925616|ref|YP_001897258.1| 50S ribosomal protein L3 [Burkholderia phytofirmans PsJN] gi|296163321|ref|ZP_06846082.1| 50S ribosomal protein L3 [Burkholderia sp. Ch1-1] gi|123062494|sp|Q13TH0|RL3_BURXL RecName: Full=50S ribosomal protein L3 gi|226725143|sp|B2T751|RL3_BURPP RecName: Full=50S ribosomal protein L3 gi|91689419|gb|ABE32619.1| LSU ribosomal protein L3P [Burkholderia xenovorans LB400] gi|187716810|gb|ACD18034.1| ribosomal protein L3 [Burkholderia phytofirmans PsJN] gi|295886460|gb|EFG66317.1| 50S ribosomal protein L3 [Burkholderia sp. Ch1-1] Length = 219 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 96/212 (45%), Positives = 130/212 (61%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGTRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EF++ L G+V P F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVQAGEILKEFQIDAAKAAELSNGTVVGPDLFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG + VTV+NLE+ Sbjct: 121 YAGTIKRYNFASGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDDTVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D R L+LVKG VPGA K + V + K Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211 >gi|302769378|ref|XP_002968108.1| hypothetical protein SELMODRAFT_145395 [Selaginella moellendorffii] gi|300163752|gb|EFJ30362.1| hypothetical protein SELMODRAFT_145395 [Selaginella moellendorffii] Length = 255 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 110/212 (51%), Positives = 147/212 (69%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K GMT V++ GRRIP+TVL D+ QVV +T+D G+ A+QVG G+ K K + Sbjct: 7 RTGLIAVKCGMTAVWDKWGRRIPITVLWADDNQVVQVKTVDHEGFNALQVGCGQKKPKQL 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 S P G F S V K+KL EF+V +D LLPVG+ + +F GQ +DVTG++IGKGF Sbjct: 67 SIPELGHFRSKGVPIKRKLKEFQVSED-ALLPVGTALTVRHFVPGQFLDVTGVSIGKGFQ 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR F G+ A+HG S+SHRSHG+TG R+ PG+VFKNKKMAG+MG + TV + V Sbjct: 126 GPMKRWGFAGMPASHGASLSHRSHGATGGRKSPGKVFKNKKMAGQMGNRKATVFCVWVYK 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V+ +R LI VKG VPG K N ++ +RDS+ Sbjct: 186 VEPQRDLIWVKGQVPGCKGN-FVYIRDSWNKP 216 >gi|326773963|ref|ZP_08233245.1| 50S ribosomal protein L3 [Actinomyces viscosus C505] gi|326636102|gb|EGE37006.1| 50S ribosomal protein L3 [Actinomyces viscosus C505] Length = 222 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 89/209 (42%), Positives = 127/209 (60%), Gaps = 2/209 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ KLGMT +++ G PVTV+ +D V RT++ +GY AVQ+ G+ V+KP Sbjct: 16 LLGTKLGMTQIWDENGVLRPVTVVRVDTNVVTQVRTIETDGYEAVQLAFGDIDASKVTKP 75 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + G F+ V P++ + E R + P G + F VGQLVDVTG + GKGF+G M Sbjct: 76 LAGHFAKAGVEPRRHVAEIRTSLASEFTP-GQELAADTFEVGQLVDVTGTSKGKGFAGVM 134 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH F G+ A+HG +HR GS G PGR+FK +MAGRMG R TV+NL++ +D Sbjct: 135 KRHGFAGVGASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGHARRTVQNLKIRGIDV 194 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +G++LV G +PG K S ++VR + K A Sbjct: 195 DKGVLLVNGAIPGP-KGSVVVVRTAVKGA 222 >gi|16801842|ref|NP_472110.1| 50S ribosomal protein L3 [Listeria innocua Clip11262] gi|116873998|ref|YP_850779.1| 50S ribosomal protein L3 [Listeria welshimeri serovar 6b str. SLCC5334] gi|42559673|sp|Q927K7|RL3_LISIN RecName: Full=50S ribosomal protein L3 gi|123466648|sp|A0ALW8|RL3_LISW6 RecName: Full=50S ribosomal protein L3 gi|16415317|emb|CAC98007.1| ribosomal protein L3 [Listeria innocua Clip11262] gi|116742876|emb|CAK22000.1| ribosomal protein L3 [Listeria welshimeri serovar 6b str. SLCC5334] Length = 209 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 128/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY AVQ+G + + K Sbjct: 1 MTKGILGRKVGMTQVFTENGELIPVTVIEAAQNVVLQKKTVETDGYEAVQIGFEDKRAKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + + +PK+ + EFR + D +G+ F G ++D TG++ GKGF Sbjct: 61 SNKPEQGHVAKADTTPKRFIREFR-DVNLDEYEIGAEVKVDVFAEGDIIDATGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK + GRMGG ++T++NLE+V Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQITIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++ ++LVKG VPGAKK + + ++ + K+ Sbjct: 178 KVDVEKNVLLVKGNVPGAKK-ALVQIKTATKA 208 >gi|25027078|ref|NP_737132.1| 50S ribosomal protein L3 [Corynebacterium efficiens YS-314] gi|259506793|ref|ZP_05749693.1| 50S ribosomal protein L3 [Corynebacterium efficiens YS-314] gi|42559646|sp|Q8FS80|RL3_COREF RecName: Full=50S ribosomal protein L3 gi|23492358|dbj|BAC17332.1| putative 50S ribosomal protein L3 [Corynebacterium efficiens YS-314] gi|259165664|gb|EEW50218.1| 50S ribosomal protein L3 [Corynebacterium efficiens YS-314] Length = 218 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 86/214 (40%), Positives = 125/214 (58%), Gaps = 2/214 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT +++ E R IPVTV+ C V RT++ +GY A+Q+ GE + V+ Sbjct: 7 KGILGTKLGMTQIFDEENRVIPVTVVEAGPCVVSQIRTVETDGYNAIQIAYGEIDPRKVN 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 +P+ G F V+P++ + E R+ D VG + F + VDVTG + GKG++G Sbjct: 67 QPLTGHFKKAGVTPRRHVTEIRMD-DVSGYEVGQDVTVEIFNDVKFVDVTGTSKGKGYAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRH F G A HG +HR G G PGR+FK K+MAGRMG +RVT +NL+V + Sbjct: 126 AMKRHGFAGQGAGHGNQAAHRRVGGIGAAATPGRIFKGKRMAGRMGNDRVTTQNLKVQKI 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D LIL+KG +PG + + V+ + K + Sbjct: 186 DADANLILIKGAIPG-NRGGIVTVKTAVKGGAHA 218 >gi|84494786|ref|ZP_00993905.1| putative ribosomal protein L3 [Janibacter sp. HTCC2649] gi|84384279|gb|EAQ00159.1| putative ribosomal protein L3 [Janibacter sp. HTCC2649] Length = 218 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 92/211 (43%), Positives = 126/211 (59%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ +KLGMT V++ E R IPVTV+ C V R + +GY AVQ+ G + V+ Sbjct: 10 KGVLGKKLGMTQVWDAENRLIPVTVIEAGPCVVTQVRNAETDGYAAVQIAFGAIDPRKVT 69 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F V+P++ L E R D +G + F GQ VD++ T GKGF+G Sbjct: 70 KPLTGHFEKAGVTPRRHLVELR-TADAAEYSLGQELTAETFEAGQAVDISATTKGKGFAG 128 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ ++HG +HR GS G PGRVFK +MAGRMGG R T +NL + +V Sbjct: 129 VMKRHGFHGVSSSHGSHKNHRKPGSIGGCATPGRVFKGMRMAGRMGGVRQTTQNLTIHAV 188 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +GL+LVKG VPG + + +LVR++ K A Sbjct: 189 VADKGLLLVKGAVPGP-RGAVVLVRNAVKGA 218 >gi|329938232|ref|ZP_08287683.1| 50S ribosomal protein L3 [Streptomyces griseoaurantiacus M045] gi|329302721|gb|EGG46611.1| 50S ribosomal protein L3 [Streptomyces griseoaurantiacus M045] Length = 214 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 95/211 (45%), Positives = 127/211 (60%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ G+ + V+ Sbjct: 6 KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDADGYESVQIAFGDIDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 66 KPLKGHFAKADVTPRRHLVEIR-TADAAEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+L+KG VPG +LVR + K A Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214 >gi|291549416|emb|CBL25678.1| LSU ribosomal protein L3P [Ruminococcus torques L2-14] Length = 227 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 90/229 (39%), Positives = 126/229 (55%), Gaps = 20/229 (8%) Query: 1 MRSGVVARKLGMTCVYNI-EGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV- 58 M+ ++A K+GMT ++N +G IPVTVL C V +T++ +GY AVQVG + K Sbjct: 1 MKKAILATKVGMTQIFNEEDGVLIPVTVLQAGPCVVTQVKTVENDGYSAVQVGYVDKKEK 60 Query: 59 ---------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103 V+K +G F VS K+ + EFR + ++ + F Sbjct: 61 IVTKDNSGKKSIAHRNGVTKAEKGHFDKAGVSGKRYVKEFRFENAEE-YTLAQEIKADIF 119 Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 G +D T ++ GKGF GA+KRHN THG S HR GS G DP +VFK KKM Sbjct: 120 AAGDKIDATAVSKGKGFQGAIKRHNQSRGPMTHG-SKFHRHAGSNGSASDPSKVFKGKKM 178 Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G+MG ++TV+NLEVV VD + LILVKG VPG KK + ++++ K+ Sbjct: 179 PGQMGNKKITVQNLEVVRVDAENNLILVKGSVPGPKK-CLVTIKETVKA 226 >gi|205372069|ref|ZP_03224886.1| 50S ribosomal protein L3 [Bacillus coahuilensis m4-4] Length = 209 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 90/212 (42%), Positives = 124/212 (58%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T D +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTADTDGYSAIQLGFEDMRAKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G + +PK+ + E R + VG F G +VDVTG++ GKGF Sbjct: 61 ANKPRTGHAAKAETAPKRFIREIR-DANVAEYEVGQEVKVDTFAAGDVVDVTGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH +HG S HR GS G P RVFK K + GRMGG+ VTV+NLE+V Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGDIVTVQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPGAKK + + V+ + K+ Sbjct: 178 KVDVERNLLLVKGNVPGAKK-ALVKVQSAVKA 208 >gi|85715131|ref|ZP_01046115.1| 50S ribosomal protein L3 [Nitrobacter sp. Nb-311A] gi|85698046|gb|EAQ35919.1| 50S ribosomal protein L3 [Nitrobacter sp. Nb-311A] Length = 247 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 127/219 (57%), Positives = 158/219 (72%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G IPVTVL L NCQV+ HRT +KNGY+A+Q+G+G K Sbjct: 1 MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLSNCQVLGHRTSEKNGYVALQLGSGARKTVY 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + K RG F+ V PK+K+ EFRV +D L+PVG+ +F VGQ VDVTG ++GKG+ Sbjct: 61 MPKAERGQFAVAKVEPKRKVAEFRVSQD-SLIPVGAEIQADHFVVGQFVDVTGTSVGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G MG +R+T NL VV Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 D +RGLILV+G VPG+ K WI VRD+ K + + Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWIAVRDAVKKPLPKEAP 217 >gi|255659503|ref|ZP_05404912.1| 50S ribosomal protein L3 [Mitsuokella multacida DSM 20544] gi|260848055|gb|EEX68062.1| 50S ribosomal protein L3 [Mitsuokella multacida DSM 20544] Length = 214 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 100/217 (46%), Positives = 135/217 (62%), Gaps = 5/217 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ RKLGMT ++ EG+ +PVTV+ N V+ ++T++ +GY AVQ+G GE K Sbjct: 1 MSKAILGRKLGMTQIFTEEGKVVPVTVVESGNNVVIQNKTVESDGYNAVQLGFGEVKENK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F VSP K + E R+ D VG F+ G+LVDVTG + GKGF Sbjct: 61 VNKPLKGHFEKAGVSPVKFIREMRL-ADASEYKVGDTIGVDIFSAGELVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KRHNF HG S SHR GSTG GRV K KK+ GRMGG RVTV+ L Sbjct: 120 AGGIKRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLT 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 VV VD R LIL+KG +PG KK S+++++++ K N Sbjct: 179 VVRVDADRNLILIKGAIPGPKK-SFVVIKNTVKPGKN 214 >gi|115350322|ref|YP_772161.1| 50S ribosomal protein L3 [Burkholderia ambifaria AMMD] gi|134294443|ref|YP_001118178.1| 50S ribosomal protein L3 [Burkholderia vietnamiensis G4] gi|122324266|sp|Q0BJ46|RL3_BURCM RecName: Full=50S ribosomal protein L3 gi|166233128|sp|A4JAP0|RL3_BURVG RecName: Full=50S ribosomal protein L3 gi|115280310|gb|ABI85827.1| LSU ribosomal protein L3P [Burkholderia ambifaria AMMD] gi|134137600|gb|ABO53343.1| LSU ribosomal protein L3P [Burkholderia vietnamiensis G4] Length = 217 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 95/212 (44%), Positives = 129/212 (60%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 2 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR+ L G+V F VGQ VDV G++IGKG Sbjct: 62 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGADLFEVGQKVDVQGVSIGKG 121 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RATHG S SH GS G QDPGRVF K+M G +G VTV+NLE+ Sbjct: 122 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTVTVQNLEI 181 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D +R L+LVKG +PGA K + V + K Sbjct: 182 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVK 212 >gi|170700694|ref|ZP_02891689.1| ribosomal protein L3 [Burkholderia ambifaria IOP40-10] gi|171318348|ref|ZP_02907506.1| ribosomal protein L3 [Burkholderia ambifaria MEX-5] gi|172059341|ref|YP_001806993.1| 50S ribosomal protein L3 [Burkholderia ambifaria MC40-6] gi|212288249|sp|B1YRD0|RL3_BURA4 RecName: Full=50S ribosomal protein L3 gi|170134364|gb|EDT02697.1| ribosomal protein L3 [Burkholderia ambifaria IOP40-10] gi|171096426|gb|EDT41325.1| ribosomal protein L3 [Burkholderia ambifaria MEX-5] gi|171991858|gb|ACB62777.1| ribosomal protein L3 [Burkholderia ambifaria MC40-6] Length = 216 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 95/212 (44%), Positives = 129/212 (60%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR+ L G+V F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGADLFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RATHG S SH GS G QDPGRVF K+M G +G VTV+NLE+ Sbjct: 121 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D +R L+LVKG +PGA K + V + K Sbjct: 181 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVK 211 >gi|27380511|ref|NP_772040.1| 50S ribosomal protein L3 [Bradyrhizobium japonicum USDA 110] gi|42559627|sp|Q89J84|RL3_BRAJA RecName: Full=50S ribosomal protein L3 gi|27353675|dbj|BAC50665.1| 50S ribosomal protein L3 [Bradyrhizobium japonicum USDA 110] Length = 238 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 126/219 (57%), Positives = 158/219 (72%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G IPVTVL L NCQVV HRT +KNGY+A+Q+G+G K Sbjct: 1 MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLGNCQVVGHRTEEKNGYVALQLGSGSRKTVY 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + K RG F+ V PK+++ EFRV D ++PVG+ +F VGQ VDVTG ++GKGF Sbjct: 61 MPKAERGQFAVAKVEPKRRVEEFRVTAD-AMIPVGAEIQADHFVVGQFVDVTGTSVGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ +KNKKM G MG +R+T NL VV Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTWKNKKMPGHMGVDRITTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 +D +RGLILV+G VPG+ K WI VRD+ K + + Sbjct: 180 QLDVERGLILVEGAVPGS-KGGWIRVRDAVKKPLPKEAP 217 >gi|289523369|ref|ZP_06440223.1| 50S ribosomal protein L3 [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503061|gb|EFD24225.1| 50S ribosomal protein L3 [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 209 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 92/206 (44%), Positives = 129/206 (62%), Gaps = 2/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT +++ EG+ +PVTV+ C+VV R + Y A+ +G G+ K Sbjct: 1 MSLGILGVKVGMTQIFDEEGQAVPVTVVEAGPCKVVALRRPEVEMYSAIVLGFGKVKAHR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KPM G + + PK+ L EFR+ D VG + F VG++VDVTG + GKGF Sbjct: 61 LNKPMLGVYKKAGIEPKRWLREFRLD-DVTGYEVGQTIDVTIFEVGEVVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRH FGG A+HG S+ HR GS+G P VFK K M GRMG RVTVKNL+VV Sbjct: 120 AGVMKRHGFGGGPASHGASLFHRRAGSSGASSFPSHVFKGKTMPGRMGNERVTVKNLKVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 +VD + L+L+KG +PG +N ++V Sbjct: 180 AVDKENNLLLIKGAIPGP-RNGLVMV 204 >gi|307328030|ref|ZP_07607211.1| 50S ribosomal protein L3 [Streptomyces violaceusniger Tu 4113] gi|306886335|gb|EFN17340.1| 50S ribosomal protein L3 [Streptomyces violaceusniger Tu 4113] Length = 214 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 97/211 (45%), Positives = 126/211 (59%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGMT V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+ Sbjct: 6 KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTDDADGYSAVQIAFGEIDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKG +G Sbjct: 66 KPLKGHFAKADVTPRRHLVELRTT-DAGEYTLGQEVTAEVFESGVRVDVTGTSKGKGTAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V Sbjct: 125 VMKRHGFAGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+L+KG VPG +LVR + K A Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214 >gi|209521385|ref|ZP_03270098.1| ribosomal protein L3 [Burkholderia sp. H160] gi|209498205|gb|EDZ98347.1| ribosomal protein L3 [Burkholderia sp. H160] Length = 219 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 96/212 (45%), Positives = 130/212 (61%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVTFGTRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EF++ L G+V P F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVQAGEILKEFQIDAAKAAELSNGTVVGPELFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG +VTV+NLE+ Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDEKVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D R L+LVKG VPGA K + V + K Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211 >gi|309812372|ref|ZP_07706127.1| 50S ribosomal protein L3 [Dermacoccus sp. Ellin185] gi|308433677|gb|EFP57554.1| 50S ribosomal protein L3 [Dermacoccus sp. Ellin185] Length = 210 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 94/211 (44%), Positives = 129/211 (61%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ + R IPVTV+ + C V R+ +GY AVQ+G G+ + V+ Sbjct: 2 KGLLGEKLGMTQVWDADNRLIPVTVVAVGPCVVTQLRSEGVDGYNAVQIGYGQIDPRKVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F V+P++ L E R D +G + F GQ VDV G T GKGF+G Sbjct: 62 KPLTGHFEKAGVTPRRHLAELRTS-DAGEYSLGQELTAEAFEAGQKVDVVGRTKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G PGRVFK +MAGRMGG R T +NL++ +V Sbjct: 121 VMKRHGFAGVSASHGAHRNHRKPGSIGGCATPGRVFKGMRMAGRMGGVRQTTQNLQIHAV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+L+KG VPG + +LVR + K A Sbjct: 181 DAEKGLLLIKGAVPGPA-GAVVLVRTAIKGA 210 >gi|325068030|ref|ZP_08126703.1| 50S ribosomal protein L3 [Actinomyces oris K20] Length = 222 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 89/209 (42%), Positives = 128/209 (61%), Gaps = 2/209 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ KLGMT +++ G PVTV+ +D V RT++ +GY AVQ+ G+ + V+KP Sbjct: 16 LLGTKLGMTQIWDENGVLRPVTVVRVDTNVVTQVRTIETDGYEAVQLAFGDIDARKVTKP 75 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + G F+ V P++ + E R + P G + F VGQLVDVTG + GKGF+G M Sbjct: 76 LAGHFAKAGVEPRRHVAEIRTSLASEFTP-GQELAADTFEVGQLVDVTGTSKGKGFAGVM 134 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH F G+ A+HG +HR GS G PGR+FK +MAGRMG R TV+NL++ +D Sbjct: 135 KRHGFAGVGASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGHARRTVQNLKIRGIDV 194 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +G++LV G +PG K S ++VR + K A Sbjct: 195 DKGVLLVNGAIPGP-KGSVVVVRTAVKGA 222 >gi|51894210|ref|YP_076901.1| 50S ribosomal protein L3 [Symbiobacterium thermophilum IAM 14863] gi|81826004|sp|Q67JU3|RL3_SYMTH RecName: Full=50S ribosomal protein L3 gi|51857899|dbj|BAD42057.1| 50S ribosomal protein L3 [Symbiobacterium thermophilum IAM 14863] Length = 216 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 98/210 (46%), Positives = 132/210 (62%), Gaps = 4/210 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +KLGMT ++ +G+ IPVTV+ C VV +T +GY AVQ+G GE + Sbjct: 1 MQKGILGKKLGMTQIFAPDGKIIPVTVVEAGPCVVVQKKTTATDGYNAVQLGFGEIRETL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F V + L EFR+ D + L VG V F G+LVDVTG++ GKGF Sbjct: 61 VNKPLKGHFEKHQVKATRYLREFRLD-DVESLNVGDVIKADIFAEGELVDVTGISRGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NF ++HG S HR GS G R+ RV K +K+ GR+GG RVTV L VV Sbjct: 120 AGGVKRWNFNRGPSSHG-SKYHRRPGSLGQRRW-ARVPKGRKLPGRLGGERVTVLGLRVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 VD ++ LIL+KG VPGA K S I +RDS Sbjct: 178 KVDPEKNLILIKGAVPGA-KGSLITIRDSV 206 >gi|304310016|ref|YP_003809614.1| 50S ribosomal protein L3 [gamma proteobacterium HdN1] gi|301795749|emb|CBL43948.1| 50S ribosomal protein L3 [gamma proteobacterium HdN1] Length = 212 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 100/213 (46%), Positives = 136/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V +K GMT ++N +G VTV+ +D +V + +++D++GY AVQV G K Sbjct: 1 MAIGLVGKKCGMTRIFNEDGSSTSVTVIEVDPNRVTLIKSVDRDGYSAVQVTTGVRKAST 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G FS V L+EFR D + L VG S F GQ VDVTG++ GKG Sbjct: 61 VNKAEAGLFSKAGVEAGSGLWEFRFPDDAAITLSVGDSVGVSIFEAGQAVDVTGVSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KR NF ATHG S+SHR+ GS G RQ PGRVFK KKM+G +G +VTV++L++ Sbjct: 121 FAGVVKRWNFRTQDATHGNSLSHRAPGSIGQRQTPGRVFKGKKMSGHLGDAQVTVQSLQL 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LVKG VPGA N+ ++VR + K Sbjct: 181 VRVDVERNLLLVKGAVPGAAGNN-VIVRPALKG 212 >gi|325678624|ref|ZP_08158234.1| 50S ribosomal protein L3 [Ruminococcus albus 8] gi|324109674|gb|EGC03880.1| 50S ribosomal protein L3 [Ruminococcus albus 8] Length = 212 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 91/214 (42%), Positives = 133/214 (62%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +K+GMT +++ G+ +PVTV+ C VV +T++ +GY AVQ+G GE + K Sbjct: 1 MQKGIIGKKIGMTQIFDETGKVVPVTVVEAGPCVVVQKKTVENDGYEAVQLGYGEIRAKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F +V+ K+ L EF++ D + VG + FT G +VDV+G + G GF Sbjct: 61 VNKPLQGHFKKADVAMKRTLKEFKL-ADAANMNVGDIVKAEVFTEGDVVDVSGTSKGHGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG +KRHN L+ THG HR GS G DP R++K KKM G+ G +VTV+NL VV Sbjct: 120 SGTIKRHNGHRLKETHGTGPVHRHAGSYGACSDPSRIYKGKKMPGQYGNVKVTVQNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 VD + LI +KG +PG KN + + DS K Sbjct: 180 KVDAENNLIAIKGAIPGP-KNGTVTICDSVKKKA 212 >gi|90424937|ref|YP_533307.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris BisB18] gi|109893548|sp|Q211E8|RL3_RHOPB RecName: Full=50S ribosomal protein L3 gi|90106951|gb|ABD88988.1| LSU ribosomal protein L3P [Rhodopseudomonas palustris BisB18] Length = 243 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 126/219 (57%), Positives = 156/219 (71%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT V+ G IPVTVL L NCQV+ HRT +KNGY+A+Q+G+G K Sbjct: 1 MRSGVIAQKVGMTRVFTETGEHIPVTVLKLGNCQVLGHRTTEKNGYVAMQLGSGTRKTVY 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + K RG F+ V PK+K+ EFRV +D L+PVG+ +F VGQ VDVTG ++GKGF Sbjct: 61 LPKAERGQFAVAKVEPKRKVAEFRVSED-ALIPVGAEIQADHFVVGQFVDVTGTSVGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T NL VV Sbjct: 120 AGGIKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 D RGLILV+G VPG+ K WI VRD+ K + Sbjct: 180 QTDVARGLILVEGAVPGS-KGGWIAVRDAVKKVLPADAP 217 >gi|255326842|ref|ZP_05367918.1| 50S ribosomal protein L3 [Rothia mucilaginosa ATCC 25296] gi|283457543|ref|YP_003362126.1| 50S ribosomal protein L3 [Rothia mucilaginosa DY-18] gi|255296059|gb|EET75400.1| 50S ribosomal protein L3 [Rothia mucilaginosa ATCC 25296] gi|283133541|dbj|BAI64306.1| ribosomal protein L3 [Rothia mucilaginosa DY-18] Length = 218 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 88/211 (41%), Positives = 122/211 (57%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ +G+ +PVTV+ D+ V R + +GY AVQ+G G + V+ Sbjct: 10 KGLLGTKLGMTQVWDEDGKFVPVTVVKADSNVVTQIRNQETDGYEAVQIGFGAIDSRKVT 69 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F V+P++ + E R D +G + F GQ VDV G T GKGF+G Sbjct: 70 KPLAGHFEKAGVTPRRHIVELR-TADASEYSLGQELTVELFEAGQKVDVVGKTKGKGFAG 128 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G P RVFK +MAGRMG R T NL + V Sbjct: 129 VMKRHGFKGVGASHGQHKNHRKPGSIGGASYPARVFKGMRMAGRMGAARHTTLNLTIQGV 188 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + ++L+KG +PG K +LVR + K A Sbjct: 189 DAENNVLLIKGAIPGP-KGGVVLVRTAVKGA 218 >gi|309799058|ref|ZP_07693311.1| ribosomal protein L3 [Streptococcus infantis SK1302] gi|308117293|gb|EFO54716.1| ribosomal protein L3 [Streptococcus infantis SK1302] Length = 208 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 89/213 (41%), Positives = 129/213 (60%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNVEGLEVGAEITVETFAAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFK K +AGRMGG+RVT++NLEVV Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+ Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAG 207 >gi|283782758|ref|YP_003373512.1| 50S ribosomal protein L3 [Gardnerella vaginalis 409-05] gi|297242968|ref|ZP_06926906.1| ribosomal protein L3 [Gardnerella vaginalis AMD] gi|298253073|ref|ZP_06976865.1| ribosomal protein L3 [Gardnerella vaginalis 5-1] gi|283442144|gb|ADB14610.1| 50S ribosomal protein L3 [Gardnerella vaginalis 409-05] gi|296889179|gb|EFH27913.1| ribosomal protein L3 [Gardnerella vaginalis AMD] gi|297532468|gb|EFH71354.1| ribosomal protein L3 [Gardnerella vaginalis 5-1] Length = 216 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 85/212 (40%), Positives = 122/212 (57%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+ ++ RKLGM+ V++ G +PVT++ + V +T++ +GY AVQ+G G+ V Sbjct: 7 RTALLGRKLGMSQVWDENGFFVPVTLVEVATNVVTAVKTVESDGYCAVQLGYGQIDPTKV 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G F+ V+P++ L E R + D P G + F G VDVTG T GKGF+ Sbjct: 67 TKPLAGHFAKAGVTPRRHLAEVRTENAADYQP-GQELTAELFAEGSEVDVTGTTKGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F R THG + R GS G P R+ K K+MAGRMG T NL +VS Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTSTALNLTIVS 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + G++ +KG VPG K + +LVR + K A Sbjct: 186 SDVENGILAIKGAVPGP-KGAIVLVRSAVKGA 216 >gi|153854970|ref|ZP_01996183.1| hypothetical protein DORLON_02189 [Dorea longicatena DSM 13814] gi|149752467|gb|EDM62398.1| hypothetical protein DORLON_02189 [Dorea longicatena DSM 13814] Length = 226 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 86/228 (37%), Positives = 123/228 (53%), Gaps = 19/228 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53 M+ ++A K+GMT ++N +G PVTVL C V +T++ +GY AVQVG Sbjct: 1 MKKAILATKVGMTQIFNEDGTLTPVTVLQAGPCAVTQIKTVENDGYEAVQVGFVDKKDKI 60 Query: 54 -----GEAKV----KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 G K V+K +G F+ V+ K+ + EF+ + + +G F Sbjct: 61 INKDKGGKKEIVHRHGVTKAEQGHFAKAGVTGKRYVREFKFENASE-YELGQEIKADIFA 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G +D T ++ GKGF GA+KRHN HG S HR GS G DP +VFK K M Sbjct: 120 AGDKIDATAISKGKGFQGAIKRHNQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKHMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G MG ++TV+NL VV VD + L+LVKG VPG KK S + ++++ K+ Sbjct: 179 GHMGSKKITVQNLVVVRVDAENNLLLVKGSVPGPKK-SLVTIKEAVKA 225 >gi|108797986|ref|YP_638183.1| 50S ribosomal protein L3 [Mycobacterium sp. MCS] gi|119867082|ref|YP_937034.1| 50S ribosomal protein L3 [Mycobacterium sp. KMS] gi|126433648|ref|YP_001069339.1| 50S ribosomal protein L3 [Mycobacterium sp. JLS] gi|123070590|sp|Q1BDA7|RL3_MYCSS RecName: Full=50S ribosomal protein L3 gi|166233164|sp|A3PVC1|RL3_MYCSJ RecName: Full=50S ribosomal protein L3 gi|166233165|sp|A1UBN6|RL3_MYCSK RecName: Full=50S ribosomal protein L3 gi|108768405|gb|ABG07127.1| LSU ribosomal protein L3P [Mycobacterium sp. MCS] gi|119693171|gb|ABL90244.1| LSU ribosomal protein L3P [Mycobacterium sp. KMS] gi|126233448|gb|ABN96848.1| LSU ribosomal protein L3P [Mycobacterium sp. JLS] Length = 217 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 88/214 (41%), Positives = 125/214 (58%), Gaps = 3/214 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ + +PVTV+ V RT +++GY AVQ+ GE + V Sbjct: 3 RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTPERDGYSAVQIAYGEISPRKV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP+ G F++ V+P++ L E R+ + VG + F+ G VDVTG + GKG Sbjct: 63 NKPVTGQFAAAGVNPRRHLAELRLDDESAAADYEVGQELTAEVFSDGAYVDVTGTSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKRH F G A HG HR GS G PGRVFK +M+GRMG +RVT +NL V Sbjct: 123 FAGTMKRHGFKGQGAAHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGSDRVTTQNLVV 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD G++L+KG +PG + ++VR + K Sbjct: 183 HKVDAANGVLLIKGAIPG-RNGGLVMVRSAIKRG 215 >gi|271962632|ref|YP_003336828.1| 50S ribosomal protein L3P [Streptosporangium roseum DSM 43021] gi|270505807|gb|ACZ84085.1| LSU ribosomal protein L3P [Streptosporangium roseum DSM 43021] Length = 217 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 96/212 (45%), Positives = 132/212 (62%), Gaps = 2/212 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ +KLGMT V++ + R +PVTV+ C V RT +K+GY AVQ+G G+ + V+ Sbjct: 6 KGVLGKKLGMTQVFDADNRMVPVTVVEAGPCVVTRVRTPEKDGYSAVQLGFGQVDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ + +++P++ E R +D +G S F GQ VDVTG + GKGF+G Sbjct: 66 KPLGDYLRKHDITPRRYFAEIR-TEDAGDYTLGQELSADTFEAGQFVDVTGKSKGKGFAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F GL A+HG HRS GS G PGRVFK +MAGRMG R TV++L+V +V Sbjct: 125 VMKRHGFKGLSASHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNVRTTVQSLKVHAV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D ++GLIL+KG +PGA S +LVR + K Sbjct: 185 DAEKGLILIKGAIPGAN-GSLVLVRTAAKKGA 215 >gi|325689231|gb|EGD31237.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK115] Length = 208 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 91/213 (42%), Positives = 131/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVIEAAPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVT++NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTIQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+ Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAG 207 >gi|226323010|ref|ZP_03798528.1| hypothetical protein COPCOM_00782 [Coprococcus comes ATCC 27758] gi|225208577|gb|EEG90931.1| hypothetical protein COPCOM_00782 [Coprococcus comes ATCC 27758] Length = 226 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 88/228 (38%), Positives = 124/228 (54%), Gaps = 19/228 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58 M+ ++A K+GMT ++N +G PVTVL C V +T++ +GY AVQVG + K Sbjct: 1 MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQIKTVENDGYSAVQVGFVDKKDKI 60 Query: 59 --------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V+K +G F V+ K+ + EF+ + D+ + F Sbjct: 61 VNVDKNGKKEIVHRHGVTKAEKGHFDKAGVTGKRFVKEFKFENADE-YQLAQEIKADIFE 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G VD T ++ GKGF GA+KRHN HG S HR GS G DP +VFK KKM Sbjct: 120 AGDKVDATAISKGKGFQGAIKRHNQHRGPMAHG-SKFHRHAGSNGAASDPSKVFKGKKMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G MG ++T++NLE+V VD + L+LVKG VPG KK S + +++S KS Sbjct: 179 GHMGAKKITIQNLEIVRVDVENNLLLVKGAVPGPKK-SLVTIKESVKS 225 >gi|302553542|ref|ZP_07305884.1| 50S ribosomal protein L3 [Streptomyces viridochromogenes DSM 40736] gi|302471160|gb|EFL34253.1| 50S ribosomal protein L3 [Streptomyces viridochromogenes DSM 40736] Length = 214 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 97/211 (45%), Positives = 127/211 (60%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ GE + V+ Sbjct: 6 KGILGEKLGMTQVWDANNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G FS +V+P++ L E R D +G + F G VDVTG + GKGF+G Sbjct: 66 KPLKGHFSKADVTPRRHLVEIR-TADASEYTLGQEITAEVFEAGVKVDVTGKSKGKGFAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V Sbjct: 125 VMKRHNFRGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+L+KG VPG +LVR + K A Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214 >gi|325123604|gb|ADY83127.1| 50S ribosomal protein L3 [Acinetobacter calcoaceticus PHEA-2] Length = 212 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 96/213 (45%), Positives = 134/213 (62%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY AVQV GE + Sbjct: 1 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFRV + + + VG F VGQ+VDVTG + GKG Sbjct: 61 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFAVGQIVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+ Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VS+D +R +++VKG +PGA ++VR + K+ Sbjct: 181 VSIDAERSVLVVKGAIPGATGGD-VIVRPTIKA 212 >gi|307823442|ref|ZP_07653671.1| 50S ribosomal protein L3 [Methylobacter tundripaludum SV96] gi|307735427|gb|EFO06275.1| 50S ribosomal protein L3 [Methylobacter tundripaludum SV96] Length = 216 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 100/212 (47%), Positives = 138/212 (65%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK GMT V+ +G +PVTVL +D+ +V + ++ +GY ++QV AG+ K Sbjct: 1 MSIGLIGRKCGMTRVFCEDGSSVPVTVLQIDSNRVTQVKGIEVDGYRSIQVAAGDKKSSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K M G +++ NV+ + L+EFR++ + L VGS S F+ GQ+VDV G +IGKG Sbjct: 61 VNKAMAGHYAAANVTAGRGLWEFRLEDGEGEDLSVGSQLSLDVFSAGQVVDVQGKSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRHNF ATHG S SHR GS G Q PGRVFK KKM G MG +VTV+NL + Sbjct: 121 FAGGIKRHNFSMQDATHGNSRSHRVLGSIGMCQTPGRVFKGKKMEGHMGAEKVTVQNLTI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 S+D R LILVKG VPGA K +++ + K Sbjct: 181 HSIDTARNLILVKGAVPGA-KGGDVVITPAMK 211 >gi|227497181|ref|ZP_03927429.1| ribosomal protein L3 [Actinomyces urogenitalis DSM 15434] gi|226833312|gb|EEH65695.1| ribosomal protein L3 [Actinomyces urogenitalis DSM 15434] Length = 222 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 88/209 (42%), Positives = 126/209 (60%), Gaps = 2/209 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ KLGMT +++ G PVTV+ +D V RT++ +GY AVQ+ GE + V+KP Sbjct: 16 LLGTKLGMTQIWDENGVLRPVTVVRVDTNVVTQVRTIETDGYEAVQLAFGEIAERKVTKP 75 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + G F+ V+P++ + E R + G + F VGQ VDV G + GKGF+G M Sbjct: 76 LAGHFAKAGVAPRRHVAEVRTSLASEF-EAGQELTADLFEVGQKVDVQGTSKGKGFAGVM 134 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH F G+ A+HG +HR GS G PGR+FK +MAGRMG TV+NL+V VD Sbjct: 135 KRHGFAGVSASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGHETTTVQNLKVRGVDV 194 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++G++LV G +PG K S ++VR + K A Sbjct: 195 EKGVLLVNGAIPGP-KGSVVVVRTAVKGA 222 >gi|148652238|ref|YP_001279331.1| 50S ribosomal protein L3 [Psychrobacter sp. PRwf-1] gi|172048471|sp|A5WCJ0|RL3_PSYWF RecName: Full=50S ribosomal protein L3 gi|148571322|gb|ABQ93381.1| LSU ribosomal protein L3P [Psychrobacter sp. PRwf-1] Length = 212 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 98/213 (46%), Positives = 136/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V +K GMT V+ G IPVTV+ +D ++ +T D +GY A+Q+ GE + Sbjct: 1 MAIGLVGKKCGMTRVFTETGASIPVTVVEVDANRITQIKTNDTDGYQAIQITTGERRDSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V + ++EFRV +++ + GS + F GQLVDVTG + GKG Sbjct: 61 VTAAQKGHFAKAGVKAGRGVWEFRVTEEELEGREAGSEIAADLFEAGQLVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KRHNF ATHG S+SHR GSTG Q PG+VFK KKM G+MG RVTV+ LEV Sbjct: 121 FQGGVKRHNFSMQDATHGNSVSHRVLGSTGQNQSPGKVFKGKKMPGQMGNKRVTVQGLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VSVD ++GL+++KG +PGA ++VR S K+ Sbjct: 181 VSVDAEKGLLVIKGAIPGANGGD-VIVRPSIKA 212 >gi|257453271|ref|ZP_05618570.1| 50S ribosomal protein L3P [Fusobacterium sp. 3_1_5R] gi|257467134|ref|ZP_05631445.1| 50S ribosomal protein L3P [Fusobacterium gonidiaformans ATCC 25563] gi|315918265|ref|ZP_07914505.1| LSU ribosomal protein L3P [Fusobacterium gonidiaformans ATCC 25563] gi|317059805|ref|ZP_07924290.1| LSU ribosomal protein L3P [Fusobacterium sp. 3_1_5R] gi|313685481|gb|EFS22316.1| LSU ribosomal protein L3P [Fusobacterium sp. 3_1_5R] gi|313692140|gb|EFS28975.1| LSU ribosomal protein L3P [Fusobacterium gonidiaformans ATCC 25563] Length = 208 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 89/210 (42%), Positives = 133/210 (63%), Gaps = 3/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++A+K+GMT ++ +G+ +PVTV+ V+ +T + +GY A+Q+G E K KN + Sbjct: 2 SGILAKKIGMTQIF-EDGKFVPVTVVEAGPNYVLQKKTEESDGYTALQLGFDEKKEKNTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ V P++ + E +V + +G F+ + VD+TG + GKG +G Sbjct: 61 KPLMGIFNKAGVKPQRFVRELKVDS-VEGYELGQEIKVDVFSEVEYVDITGTSKGKGTAG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGG RATHGVS +HR GS G PG+V K +MAGR G VTV+NL+VV V Sbjct: 120 VMKRHGFGGNRATHGVSRNHRLGGSIGQSSWPGKVLKGLRMAGRHGNATVTVQNLKVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D + L+L+KG VPGA KN +++++ + K Sbjct: 180 DAENNLLLIKGAVPGA-KNGYLVIKPAIKK 208 >gi|77409988|ref|ZP_00786570.1| ribosomal protein L3 [Streptococcus agalactiae COH1] gi|77171404|gb|EAO74691.1| ribosomal protein L3 [Streptococcus agalactiae COH1] Length = 208 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGIFGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ S F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVTV+NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ ++L+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNVVLIKGNVPGAKK-SLITIKSAVKAA 207 >gi|227502654|ref|ZP_03932703.1| 50S ribosomal protein L3 [Corynebacterium accolens ATCC 49725] gi|306835219|ref|ZP_07468253.1| 50S ribosomal protein L3 [Corynebacterium accolens ATCC 49726] gi|227076384|gb|EEI14347.1| 50S ribosomal protein L3 [Corynebacterium accolens ATCC 49725] gi|304568899|gb|EFM44430.1| 50S ribosomal protein L3 [Corynebacterium accolens ATCC 49726] Length = 218 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 87/214 (40%), Positives = 122/214 (57%), Gaps = 2/214 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +KLGMT V++ E R +PVTV+ C V RT + +GY A+Q+ GE + + Sbjct: 7 KGILGKKLGMTQVFDDENRVVPVTVVEAGPCVVTQIRTPETDGYSAIQIAFGEIDPRKAN 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P++ + E R+ D VG F VDVTG T G G++G Sbjct: 67 KPESGHFKKAGVTPRRHVAEIRMD-DTSAYEVGQEVKVDIFEGITFVDVTGQTKGHGYAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRH F G A HG +HR G G PGRVFK K+MAGRMG +RVT +NL++ V Sbjct: 126 AMKRHGFQGQGAAHGNQAAHRRVGGIGGAATPGRVFKGKRMAGRMGHDRVTTQNLKIQKV 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D + L+L+KG +PGA + + V+ + K + Sbjct: 186 DVESNLLLIKGAIPGA-RGGLVTVKTAVKGGAHA 218 >gi|322388401|ref|ZP_08062004.1| 50S ribosomal protein L3 [Streptococcus infantis ATCC 700779] gi|321140714|gb|EFX36216.1| 50S ribosomal protein L3 [Streptococcus infantis ATCC 700779] Length = 208 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 89/213 (41%), Positives = 129/213 (60%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNVEGLEVGAEITVETFAAGDIVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFK K +AGRMGG+RVT++NLEVV Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+ Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAG 207 >gi|257470826|ref|ZP_05634916.1| 50S ribosomal protein L3P [Fusobacterium ulcerans ATCC 49185] Length = 208 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 91/210 (43%), Positives = 134/210 (63%), Gaps = 3/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++A+K+GMT ++ +G+ IPVTV+ V+ +T++ +GY A+Q+G E K KN + Sbjct: 2 SGILAKKIGMTQIF-EDGKFIPVTVVEAGPNYVLQKKTVENDGYTALQLGFDEKKEKNTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F V+P++ + E RV + +G + VD+TG + GKG +G Sbjct: 61 KPIMGIFKKAGVNPQRFVKELRVDS-VEGFELGQEIKADVLAEVEYVDITGTSKGKGTAG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF G RA+HGVS +HR GS G PG+V + KKMAG+ G VTV+NL+VV V Sbjct: 120 VMKRHNFAGNRASHGVSRNHRLGGSIGMSSWPGKVLRGKKMAGQYGNATVTVQNLKVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D + L+L+KG VPG+ KNS+I+V+ + K Sbjct: 180 DVENNLLLIKGAVPGS-KNSYIVVKPAVKK 208 >gi|253581392|ref|ZP_04858618.1| ribosomal protein L3 [Fusobacterium varium ATCC 27725] gi|251836756|gb|EES65290.1| ribosomal protein L3 [Fusobacterium varium ATCC 27725] Length = 213 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 92/210 (43%), Positives = 135/210 (64%), Gaps = 3/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++A+K+GMT ++ +G+ IPVTV+ V+ +T++ +GY A+Q+G E K KN + Sbjct: 7 SGILAKKIGMTQIF-EDGKFIPVTVVEAGPNYVLQKKTVENDGYTALQLGFDEKKEKNTT 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F V+P++ + E RV + +G + VD+TG + GKG +G Sbjct: 66 KPIMGIFKKAGVNPQRFVKELRVDS-VEGFELGQEIKADVLAEVEYVDITGTSKGKGTAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNFGG RA+HGVS +HR GS G PG+V K K+MAG+ G VTV+NL+VV V Sbjct: 125 VMKRHNFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQYGNATVTVQNLKVVKV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D + L+L+KG VPG+ KNS+I+V+ + K Sbjct: 185 DVENNLLLIKGAVPGS-KNSYIVVKPAVKK 213 >gi|317050528|ref|YP_004111644.1| 50S ribosomal protein L3 [Desulfurispirillum indicum S5] gi|316945612|gb|ADU65088.1| 50S ribosomal protein L3 [Desulfurispirillum indicum S5] Length = 209 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 101/209 (48%), Positives = 131/209 (62%), Gaps = 4/209 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEA-KVKNVSK 63 ++ +K+GMT ++ +G IPVTV+ C VV +T+D +GY AVQVG EA K K VSK Sbjct: 4 LIGKKIGMTQIFCEDGTVIPVTVVEAGPCTVVQVKTVDSDGYAAVQVGFEEALKEKRVSK 63 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F+ V+P++ L EFRV +D VG + F G +DVTG + GKGF G Sbjct: 64 PLKGHFAKSGVAPQRHLKEFRV-EDPAGFSVGQQLTAEVFAAGDKIDVTGTSKGKGFQGV 122 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KRH FGG RATHG S HR+ GS G P R FKNKKM GRMGG TV+ LEVV V Sbjct: 123 IKRHGFGGGRATHG-STFHRAPGSIGMCATPSRTFKNKKMPGRMGGKTTTVQCLEVVKVM 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + L+LVKG +PG+ K I + S K+ Sbjct: 182 ADQNLLLVKGAIPGS-KGGIIEISQSQKA 209 >gi|262377312|ref|ZP_06070536.1| 50S ribosomal protein L3 [Acinetobacter lwoffii SH145] gi|262307765|gb|EEY88904.1| 50S ribosomal protein L3 [Acinetobacter lwoffii SH145] Length = 214 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 93/213 (43%), Positives = 133/213 (62%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY A+Q+ GE + Sbjct: 3 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAIQITTGERRESR 62 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFR-VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFR + D + VG + F VGQ+VDVTG + GKG Sbjct: 63 VTNAQKGHFAKAGVAAGRLVQEFRATEADLEGREVGGTLTVELFQVGQVVDVTGQSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVT + LE+ Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGAERVTTQGLEI 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V++D +R +++VKG VPGA ++VR + K+ Sbjct: 183 VAIDTERSVLVVKGAVPGATGGD-VIVRPTIKA 214 >gi|221201565|ref|ZP_03574603.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD2M] gi|221207360|ref|ZP_03580370.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD2] gi|221213498|ref|ZP_03586473.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD1] gi|254253517|ref|ZP_04946835.1| Ribosomal protein L3 [Burkholderia dolosa AUO158] gi|124896126|gb|EAY70006.1| Ribosomal protein L3 [Burkholderia dolosa AUO158] gi|221166950|gb|EED99421.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD1] gi|221172948|gb|EEE05385.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD2] gi|221178381|gb|EEE10790.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD2M] Length = 220 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 95/212 (44%), Positives = 131/212 (61%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTV+ + + +V +T++ +GY AVQV G + Sbjct: 5 MSLGLVGRKVGMTRIFTAEGDSIPVTVVDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 64 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR+ L G++ P F VGQ VDV G++IGKG Sbjct: 65 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 124 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 125 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 184 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D +R L+LVKG +PGA K + V + K Sbjct: 185 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVK 215 >gi|161523429|ref|YP_001578441.1| 50S ribosomal protein L3 [Burkholderia multivorans ATCC 17616] gi|189351798|ref|YP_001947426.1| 50S ribosomal protein L3 [Burkholderia multivorans ATCC 17616] gi|226725141|sp|A9ADJ3|RL3_BURM1 RecName: Full=50S ribosomal protein L3 gi|160340858|gb|ABX13944.1| ribosomal protein L3 [Burkholderia multivorans ATCC 17616] gi|189335820|dbj|BAG44890.1| large subunit ribosomal protein L3 [Burkholderia multivorans ATCC 17616] Length = 216 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 95/212 (44%), Positives = 131/212 (61%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ EG IPVTV+ + + +V +T++ +GY AVQV G + Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVVDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP+ G + V + L EFR+ L G++ P F VGQ VDV G++IGKG Sbjct: 61 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+ Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D +R L+LVKG +PGA K + V + K Sbjct: 181 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVK 211 >gi|326332191|ref|ZP_08198471.1| 50S ribosomal protein L3 [Nocardioidaceae bacterium Broad-1] gi|325949897|gb|EGD41957.1| 50S ribosomal protein L3 [Nocardioidaceae bacterium Broad-1] Length = 218 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 89/210 (42%), Positives = 123/210 (58%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT +++ +PVTV+ + V RT + +GY AVQ+G GE + V+ Sbjct: 8 KGLLGTKLGMTQLWDENNVVVPVTVIAANTNVVTQVRTPEVDGYNAVQIGYGEIDGRKVN 67 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F +P++ L E R D G S F VG+ +DVTG + GKGF+G Sbjct: 68 KPGAGQFEKAGTTPRRHLAEIR-TADAASYSAGQELSVDTFAVGEEIDVTGTSKGKGFAG 126 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G PGRVFK +MAG MG + VT +NL V +V Sbjct: 127 TMKRHGFAGVSASHGAHRNHRKPGSIGACATPGRVFKGVRMAGHMGTDTVTTQNLTVHAV 186 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D ++GLILVKG +PG K +++R + K Sbjct: 187 DTEKGLILVKGAIPGP-KGGLVVLRSAAKK 215 >gi|169632350|ref|YP_001706086.1| 50S ribosomal protein L3 [Acinetobacter baumannii SDF] gi|226725117|sp|B0VQR8|RL3_ACIBS RecName: Full=50S ribosomal protein L3 gi|169151142|emb|CAO99814.1| 50S ribosomal protein L3 [Acinetobacter baumannii] Length = 212 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 98/213 (46%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY AVQV GE + Sbjct: 1 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFRV + + + VG FTVGQ+VDVTG + GKG Sbjct: 61 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+ Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VSVD +R +++VKG +PGA ++VR + K+ Sbjct: 181 VSVDTERSVLVVKGAIPGATGGD-VIVRPAIKA 212 >gi|311740077|ref|ZP_07713911.1| 50S ribosomal protein L3 [Corynebacterium pseudogenitalium ATCC 33035] gi|311305150|gb|EFQ81219.1| 50S ribosomal protein L3 [Corynebacterium pseudogenitalium ATCC 33035] Length = 218 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 85/214 (39%), Positives = 123/214 (57%), Gaps = 2/214 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +KLGMT V++ + R +PVTV+ C V RT + +GY A+Q+ GE + + Sbjct: 7 KGILGKKLGMTQVFDEDNRVVPVTVVEAGPCVVTQIRTPETDGYSAIQIAFGEIDPRKAN 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F V+P++ + E R+ D VG F VDVTG T G G++G Sbjct: 67 KPVGGHFKKAGVTPRRHVAEIRMD-DTSAYEVGQEVKVDIFEGITFVDVTGKTKGHGYAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRH F G A HG +HR G G PGRVFK K+MAGRMG +RVT +NL++ + Sbjct: 126 AMKRHGFAGQGAAHGNQAAHRRVGGIGGAATPGRVFKGKRMAGRMGHDRVTTQNLKIQKI 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D + L+L+KG +PGA + + V+ + K + Sbjct: 186 DAESNLLLIKGAIPGA-RGGLVTVKTAVKGGAHA 218 >gi|313206395|ref|YP_004045572.1| LSU ribosomal protein l3p [Riemerella anatipestifer DSM 15868] gi|312445711|gb|ADQ82066.1| LSU ribosomal protein L3P [Riemerella anatipestifer DSM 15868] gi|315023664|gb|EFT36668.1| LSU ribosomal protein L3p (L3e) [Riemerella anatipestifer RA-YM] gi|325336160|gb|ADZ12434.1| Ribosomal protein L3 [Riemerella anatipestifer RA-GD] Length = 207 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 95/206 (46%), Positives = 135/206 (65%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C V+ RT++K+GY+ Q+G + KNV Sbjct: 2 SGIIGKKIGMTSLFDESGKNIPCTVIQAGPCSVLQVRTVEKDGYVGYQLGFDDKSEKNVG 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K + G F +PK KL EF D L VG + F+ G+ VDVTG + GKGF G Sbjct: 62 KALAGHFKKAGSTPKAKLHEFH--HGFDNLQVGDEVTVKLFSEGEYVDVTGTSKGKGFQG 119 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG ++ATHG R+ GS G DP RVFK +MAGRMGG +VTV+NL+V+ Sbjct: 120 VVKRHGFGGVMQATHGQHNRLRAPGSIGAGSDPSRVFKGLRMAGRMGGKQVTVQNLQVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 VD+++ L++VKG VPGA KNS++++R Sbjct: 180 VDEEQNLLVVKGAVPGA-KNSYVIIR 204 >gi|255319815|ref|ZP_05361020.1| 50S ribosomal protein L3 [Acinetobacter radioresistens SK82] gi|262380348|ref|ZP_06073502.1| 50S ribosomal protein L3 [Acinetobacter radioresistens SH164] gi|255303134|gb|EET82346.1| 50S ribosomal protein L3 [Acinetobacter radioresistens SK82] gi|262297794|gb|EEY85709.1| 50S ribosomal protein L3 [Acinetobacter radioresistens SH164] Length = 212 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 95/213 (44%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY A+QV GE + Sbjct: 1 MAIGLVGRKCGMTRIFTEAGVSVPVTVIEVDPNRITQIKTLETDGYQAIQVTTGERRESR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFRV + + + VG+ F VGQ+VDVTG + GKG Sbjct: 61 VTNGQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGASIGVDLFAVGQIVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+ Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VS+D +R +++VKG +PGA ++VR + K+ Sbjct: 181 VSIDAERSVLVVKGAIPGATGGD-VIVRPTIKA 212 >gi|317065030|ref|ZP_07929515.1| LSU ribosomal protein L3P [Fusobacterium ulcerans ATCC 49185] gi|313690706|gb|EFS27541.1| LSU ribosomal protein L3P [Fusobacterium ulcerans ATCC 49185] Length = 213 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 91/210 (43%), Positives = 134/210 (63%), Gaps = 3/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++A+K+GMT ++ +G+ IPVTV+ V+ +T++ +GY A+Q+G E K KN + Sbjct: 7 SGILAKKIGMTQIF-EDGKFIPVTVVEAGPNYVLQKKTVENDGYTALQLGFDEKKEKNTT 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F V+P++ + E RV + +G + VD+TG + GKG +G Sbjct: 66 KPIMGIFKKAGVNPQRFVKELRVDS-VEGFELGQEIKADVLAEVEYVDITGTSKGKGTAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF G RA+HGVS +HR GS G PG+V + KKMAG+ G VTV+NL+VV V Sbjct: 125 VMKRHNFAGNRASHGVSRNHRLGGSIGMSSWPGKVLRGKKMAGQYGNATVTVQNLKVVKV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D + L+L+KG VPG+ KNS+I+V+ + K Sbjct: 185 DVENNLLLIKGAVPGS-KNSYIVVKPAVKK 213 >gi|220913432|ref|YP_002488741.1| 50S ribosomal protein L3 [Arthrobacter chlorophenolicus A6] gi|254803650|sp|B8HD06|RL3_ARTCA RecName: Full=50S ribosomal protein L3 gi|219860310|gb|ACL40652.1| ribosomal protein L3 [Arthrobacter chlorophenolicus A6] Length = 216 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 90/211 (42%), Positives = 124/211 (58%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ + IPVTV+ D+ + R + +GY+AVQ+G G+ + V+ Sbjct: 8 KGLLGTKLGMTQVWDENNKLIPVTVVQADSNVITQLRNAEVDGYVAVQIGYGQIDPRKVT 67 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F V+P++ + E R D +G S F GQ +DV G T GKGF+G Sbjct: 68 KPLAGHFEKAGVTPRRHVVELR-TADAAEYELGQELSVELFAAGQKIDVIGTTKGKGFAG 126 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G P RVFK KMAGRMG R T NL V +V Sbjct: 127 VMKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGMKMAGRMGAVRHTTLNLTVHAV 186 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++ L+L+KG VPGA + + VR + K A Sbjct: 187 DAEKSLLLIKGAVPGA-RGQVVFVRTAVKGA 216 >gi|300120599|emb|CBK20153.2| unnamed protein product [Blastocystis hominis] gi|300176505|emb|CBK24170.2| unnamed protein product [Blastocystis hominis] Length = 250 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 107/207 (51%), Positives = 141/207 (68%), Gaps = 2/207 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GVVA K+GM +++ RIP TVL ++NCQVV +T +K ++QVGAG KVKNV Sbjct: 7 RTGVVALKIGMMPLWDKWCTRIPCTVLQIENCQVVQVKTKEKENTNSLQVGAGPVKVKNV 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G + SV V PK+ L EF+V +D LPVG+ + +F GQ V++ G+T GKGF Sbjct: 67 NKPLFGHYKSVGVEPKRYLTEFKVTED-AFLPVGTELTCKHFVPGQRVNIQGITQGKGFQ 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G M+R F GL A+HGVS+SHRS GSTG R+DPG+ FK KKM GRMG TV+NL V Sbjct: 126 GVMRRWGFKGLGASHGVSVSHRSLGSTGQREDPGKTFKGKKMPGRMGNKNCTVQNLLVYK 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRD 208 +D KR L+ VKGCVPG ++ + D Sbjct: 186 IDPKRNLVYVKGCVPG-NDGEYVKITD 211 >gi|320582593|gb|EFW96810.1| Mitochondrial ribosomal protein of the large subunit [Pichia angusta DL-1] Length = 272 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 108/211 (51%), Positives = 140/211 (66%), Gaps = 2/211 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ K GMT Y+ G R+P TVL +D +VV ++T+DKNGY AVQVG G K+KN Sbjct: 55 RPGLIGVKRGMTQFYSRNGDRVPATVLEIDQVEVVYNKTVDKNGYYAVQVGYGH-KLKNQ 113 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +K M G + + VSPK+ LFEF V+ ++ L+PVGS +F GQ VDV T GKGFS Sbjct: 114 TKAMLGHYRNAKVSPKETLFEFEVKDENGLVPVGSQLKADHFKPGQFVDVISKTKGKGFS 173 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR NF GL ATHG S++HRS GSTG P RV KKMAG +G T+ NLEV+ Sbjct: 174 GVMKRWNFSGLPATHGTSLAHRSAGSTGMNTTPARVLPGKKMAGHLGDEWNTIFNLEVLD 233 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V+ ++G ILVKGCV G+ S++ +RD+ K Sbjct: 234 VNAEKGYILVKGCVSGSN-GSYVQIRDALKK 263 >gi|255324736|ref|ZP_05365850.1| 50S ribosomal protein L3 [Corynebacterium tuberculostearicum SK141] gi|255298211|gb|EET77514.1| 50S ribosomal protein L3 [Corynebacterium tuberculostearicum SK141] Length = 218 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 85/214 (39%), Positives = 123/214 (57%), Gaps = 2/214 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +KLGMT V++ + R +PVTV+ C V RT + +GY A+Q+ GE + + Sbjct: 7 KGILGKKLGMTQVFDEDNRVVPVTVVEAGPCVVTQIRTPETDGYSAIQIAFGEIDPRKAN 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F V+P++ + E R+ D VG F VDVTG T G G++G Sbjct: 67 KPVGGHFKKAGVTPRRHVAEIRMD-DTSAYEVGQEVKVDIFEGTTFVDVTGKTKGHGYAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRH F G A HG +HR G G PGRVFK K+MAGRMG +RVT +NL++ + Sbjct: 126 AMKRHGFAGQGAAHGNQAAHRRVGGIGGAATPGRVFKGKRMAGRMGHDRVTTQNLKIQKI 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D + L+L+KG +PGA + + V+ + K + Sbjct: 186 DAESNLLLIKGAIPGA-RGGLVTVKTAVKGGAHA 218 >gi|296392585|ref|YP_003657469.1| 50S ribosomal protein L3 [Segniliparus rotundus DSM 44985] gi|296179732|gb|ADG96638.1| 50S ribosomal protein L3 [Segniliparus rotundus DSM 44985] Length = 221 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 89/213 (41%), Positives = 123/213 (57%), Gaps = 2/213 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ R +PVTV+ V RT +++ Y A+Q+ G + V Sbjct: 9 RVGLLGAKLGMTQVFDERNRVVPVTVIRTGVNVVTQVRTPERDKYSAIQLAFGHIDPRKV 68 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G F V+P++ L EFR+ D VG + F+ G LVDVTG + GKGF+ Sbjct: 69 NKPLAGQFEKAGVTPRRHLAEFRLD-DVSGYEVGQQIDATVFSAGDLVDVTGTSKGKGFA 127 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F G A+HG HR GS G PGRVFK +MAGRMG + T +NL V Sbjct: 128 GTMKRHGFKGQGASHGAHKVHRRPGSIGACAFPGRVFKGTRMAGRMGNAKTTTQNLTVFR 187 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 VD + G++L+KG VPG + + +R + K V Sbjct: 188 VDPEAGVLLIKGAVPG-RDGGLVFIRSAVKKGV 219 >gi|257054470|ref|YP_003132302.1| 50S ribosomal protein L3P [Saccharomonospora viridis DSM 43017] gi|256584342|gb|ACU95475.1| LSU ribosomal protein L3P [Saccharomonospora viridis DSM 43017] Length = 213 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 92/212 (43%), Positives = 123/212 (58%), Gaps = 2/212 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ R +PVTV+ V R+ +K+GY AVQ+ G + V+ Sbjct: 2 KGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQVRSKEKDGYSAVQLAFGNIDPRRVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P++ L E R D D VG + F+ G +VDVTG + GKGF+G Sbjct: 62 KPQAGHFEKAGVTPRRYLAELRTS-DADSYEVGQEITADVFSDGAVVDVTGTSKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G A+HG +HR+ GS G PGRVFK K+MAGR G RVT + L + SV Sbjct: 121 VMKRHGFAGQGASHGNQATHRAPGSIGGAATPGRVFKGKRMAGRAGNKRVTTQGLTIHSV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 + GL+L+KG VPG K + VR + K V Sbjct: 181 RAEEGLLLIKGAVPGP-KGGLVFVRSAAKGGV 211 >gi|309379159|emb|CBX22290.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 214 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 103/212 (48%), Positives = 132/212 (62%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDD-LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V EF + ++ L G + S F VGQLVDVTG + GKG Sbjct: 61 VNKAEAGHFAKAGVEGGSGSIEFALTEEKPVELKAGDEITVSMFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGTTKATVQKLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+LVKG VPGA NS ++VR S K Sbjct: 181 VRVDAERQLLLVKGAVPGAV-NSDVVVRPSVK 211 >gi|260549840|ref|ZP_05824056.1| 50S ribosomal protein L3 [Acinetobacter sp. RUH2624] gi|260407090|gb|EEX00567.1| 50S ribosomal protein L3 [Acinetobacter sp. RUH2624] Length = 214 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 97/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY AVQV GE + Sbjct: 3 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 62 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFRV + + + VG FTVGQ+VDVTG + GKG Sbjct: 63 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+ Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VS+D +R +++VKG +PGA ++VR + K+ Sbjct: 183 VSIDAERSVLVVKGAIPGATGGD-VIVRPTIKA 214 >gi|313895368|ref|ZP_07828925.1| 50S ribosomal protein L3 [Selenomonas sp. oral taxon 137 str. F0430] gi|312976263|gb|EFR41721.1| 50S ribosomal protein L3 [Selenomonas sp. oral taxon 137 str. F0430] Length = 217 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 98/219 (44%), Positives = 131/219 (59%), Gaps = 5/219 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ RKLGMT ++ EGR +PVTV+ N V+ ++T + +GY AVQ+G G+ K KN Sbjct: 1 MAKAILGRKLGMTQIFTEEGRVVPVTVVESGNNLVLRNKTNETDGYNAVQIGFGDVKEKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F V + + E R+ + VG F G LVDV G + GKGF Sbjct: 61 VTKPLKGQFEKAGVKAVRFIREMRLSAPSE-YNVGDTIGVDIFAEGDLVDVVGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KRHNF HG S SHR GSTG GRV K KK+ GRMGG RVTV+ L Sbjct: 120 AGGIKRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLT 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 VV VD R LIL+KG +PG KK +++++D+ K A K Sbjct: 179 VVRVDTDRNLILIKGAIPGPKKG-FVVIKDTVKPAKAAK 216 >gi|253577179|ref|ZP_04854499.1| 50S ribosomal protein L3 [Paenibacillus sp. oral taxon 786 str. D14] gi|251843423|gb|EES71451.1| 50S ribosomal protein L3 [Paenibacillus sp. oral taxon 786 str. D14] Length = 207 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 83/210 (39%), Positives = 115/210 (54%), Gaps = 4/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +KLGMT V+ EG IPVTV+ + V+ + L+ +GY A+Q+G + K + Sbjct: 2 KGILGKKLGMTQVFTPEGNVIPVTVIEASSNVVLQKKDLENDGYEAIQLGYSDKKEARAN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G +PK+ + E R D VG F G+ VDVTG++ GKGF G Sbjct: 62 KPEVGHAKKAGTTPKRYVREIRGV-DLAGYEVGQEVKVDIFAEGEFVDVTGISKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR HG S HR GS G RVFK K + G MG VT++NLEVV V Sbjct: 121 VIKRWGQSRGPMAHG-SRYHRRPGSMGSIA-ANRVFKGKNLPGHMGHETVTIQNLEVVKV 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R ++LVKG +PG KNS++ V+ + K Sbjct: 179 DAERNVLLVKGSIPGP-KNSFVKVKQTTKK 207 >gi|19551746|ref|NP_599748.1| 50S ribosomal protein L3 [Corynebacterium glutamicum ATCC 13032] gi|62389401|ref|YP_224803.1| 50S ribosomal protein L3 [Corynebacterium glutamicum ATCC 13032] gi|145294657|ref|YP_001137478.1| 50S ribosomal protein L3 [Corynebacterium glutamicum R] gi|42559652|sp|Q8NT09|RL3_CORGL RecName: Full=50S ribosomal protein L3 gi|166233137|sp|A4QBH9|RL3_CORGB RecName: Full=50S ribosomal protein L3 gi|21323271|dbj|BAB97899.1| Ribosomal protein L3 [Corynebacterium glutamicum ATCC 13032] gi|41324735|emb|CAF19217.1| 50S RIBOSOMAL PROTEIN L3 [Corynebacterium glutamicum ATCC 13032] gi|140844577|dbj|BAF53576.1| hypothetical protein [Corynebacterium glutamicum R] Length = 218 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 86/214 (40%), Positives = 125/214 (58%), Gaps = 2/214 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT +++ E R IPVTV+ C V RT++ +GY A+Q+ GE + V+ Sbjct: 7 KGILGTKLGMTQIFDEENRVIPVTVVEAGPCVVSQIRTVETDGYNAIQIAYGEIDPRKVN 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 +P+ G F V+P++ + E R+ D VG + F + VDVTG T GKG++G Sbjct: 67 QPLTGHFKKAGVTPRRHVTEIRMD-DVSGYEVGQDVTVEIFNDIKFVDVTGTTKGKGYAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRH F G A HG +HR G G PGR+FK K+MAGRMG +RVT +NL+V + Sbjct: 126 AMKRHGFAGQGAGHGNQAAHRRVGGIGAAATPGRIFKGKRMAGRMGNDRVTTQNLKVQKI 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D +IL+KG +PG + + V+ + K + Sbjct: 186 DADANIILIKGAIPG-NRGGIVTVKTAVKGGAHA 218 >gi|184200262|ref|YP_001854469.1| 50S ribosomal protein L3 [Kocuria rhizophila DC2201] gi|212288402|sp|B2GIL4|RL3_KOCRD RecName: Full=50S ribosomal protein L3 gi|183580492|dbj|BAG28963.1| 50S ribosomal protein L3 [Kocuria rhizophila DC2201] Length = 218 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 92/211 (43%), Positives = 124/211 (58%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ G+ +PVTV+ D+ V R DK+GY AVQ+G G + V+ Sbjct: 10 KGLLGTKLGMTQVWDENGKFVPVTVVKADSNVVTQLRNTDKDGYNAVQIGFGAIDPRKVT 69 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F++ V+P++ + E R D +G S F G VDV G T GKG +G Sbjct: 70 KPLAGHFAAAGVTPRRHVVELRTS-DAAEYELGQELSVELFEAGAKVDVVGTTKGKGTAG 128 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G P RVFK +MAGRMG R T NL V +V Sbjct: 129 VMKRHGFSGVGASHGAHKNHRKPGSIGGASYPARVFKGMRMAGRMGNARHTTMNLTVHAV 188 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + L+L+KG +PG K S +LVR + K A Sbjct: 189 DAENSLLLIKGALPGP-KGSVVLVRSTVKGA 218 >gi|257463961|ref|ZP_05628346.1| 50S ribosomal protein L3P [Fusobacterium sp. D12] gi|317061484|ref|ZP_07925969.1| LSU ribosomal protein L3P [Fusobacterium sp. D12] gi|313687160|gb|EFS23995.1| LSU ribosomal protein L3P [Fusobacterium sp. D12] Length = 208 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 90/210 (42%), Positives = 132/210 (62%), Gaps = 3/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++A+K+GMT ++ +G+ +PVTV+ V+ +T + +GY A+Q+G E K KN + Sbjct: 2 SGILAKKIGMTQIF-EDGKFVPVTVVEAGPNYVLQKKTEETDGYTALQLGFDEKKEKNTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ V P++ + E +V + +G F+ + VD+TG + GKG SG Sbjct: 61 KPLMGIFNKAGVKPQRFVRELKVDS-VEGYELGQEIKVDVFSEVEYVDITGTSKGKGTSG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGG RATHGVS +HR GS G PG+V K +MAGR G VTV+NL+VV V Sbjct: 120 VMKRHGFGGNRATHGVSRNHRLGGSIGQSSWPGKVLKGLRMAGRHGNATVTVQNLKVVRV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D L+L+KG VPGA KN +++++ + K Sbjct: 180 DADNNLLLIKGAVPGA-KNGYLVIKPAIKK 208 >gi|119511179|ref|ZP_01630296.1| 50S ribosomal protein L3 [Nodularia spumigena CCY9414] gi|119464167|gb|EAW45087.1| 50S ribosomal protein L3 [Nodularia spumigena CCY9414] Length = 211 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 85/211 (40%), Positives = 124/211 (58%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT V++ G IPVTV+ C V +T +GY A+Q+G GE K K Sbjct: 1 MSVGILGTKLGMTQVFDEAGVSIPVTVVQAGPCTVTQVKTKQTDGYSAIQLGYGEVKPKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P+ G + + + L E+ D +G F+ GQ+VDV G +IG+GF Sbjct: 61 LNRPLLGHLAKSSAPALRHLNEYHTDSPSD-YALGQELKADIFSEGQIVDVVGTSIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KR+NFG +HG S +HR+ GS G PGRV+ K+MAGR+GG RVT++ L VV Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGTRVTIRKLTVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L+L+KG +PG S + + + K Sbjct: 179 RVDLERNLLLIKGAIPGKP-GSLVNILPAKK 208 >gi|302336382|ref|YP_003801589.1| LSU ribosomal protein L3P [Olsenella uli DSM 7084] gi|301320222|gb|ADK68709.1| LSU ribosomal protein L3P [Olsenella uli DSM 7084] Length = 206 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 91/209 (43%), Positives = 123/209 (58%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M S ++ RK+GMT V++ + +PVTV+ C V +T +GY AVQ+G G+ K+ Sbjct: 1 MVSTILGRKIGMTQVWDEDDNVVPVTVIQAGPCTVSQVKTKATDGYDAVQIGFGDITAKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM G F+ V P + L E RV +D + G S + F + VDVTG + GKGF Sbjct: 61 VNKPMAGHFAKAGVEPMRYLREVRV-EDGEEHSCGDQVSVADFAEVKSVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF THG S + R GS G P RV K MAG MG RVTVKNL++V Sbjct: 120 QGTIKRWNFSRGPMTHG-SRNQRKPGSIGQCAYPARVRKGLHMAGHMGDERVTVKNLKLV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VD ++ L+LVKG VPG KN+ + +R + Sbjct: 179 RVDVEQNLMLVKGAVPGG-KNALVSIRMA 206 >gi|163840906|ref|YP_001625311.1| 50S ribosomal protein L3 [Renibacterium salmoninarum ATCC 33209] gi|189029475|sp|A9WSV9|RL3_RENSM RecName: Full=50S ribosomal protein L3 gi|162954382|gb|ABY23897.1| LSU ribosomal protein L3P [Renibacterium salmoninarum ATCC 33209] Length = 220 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 92/213 (43%), Positives = 127/213 (59%), Gaps = 2/213 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ + +PVTV+ D+ V R K+GY AVQ+G G+ + V+ Sbjct: 8 KGILGTKLGMTQVWDENNKLVPVTVVQADSNVVTQLRDAAKDGYTAVQIGYGQIDPRKVT 67 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F V+P++ + E R D D +G S F GQ VDV G + GKGF+G Sbjct: 68 KPLAGHFEKAGVTPRRHVVELR-TNDSDAYSLGQELSVEIFEAGQKVDVVGTSKGKGFAG 126 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G P RVFK KMAGRMGG R T NL V ++ Sbjct: 127 VMKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGLKMAGRMGGERHTTLNLTVHAI 186 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D ++ L+L+KG +PGA + +LVR + K+ V Sbjct: 187 DAEKSLLLIKGAIPGA-RGRVVLVRTAVKTTVK 218 >gi|124268627|ref|YP_001022631.1| 50S ribosomal protein L3 [Methylibium petroleiphilum PM1] gi|124261402|gb|ABM96396.1| LSU ribosomal protein L3P [Methylibium petroleiphilum PM1] Length = 247 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 92/215 (42%), Positives = 124/215 (57%), Gaps = 2/215 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ RK+GM ++ +G +PVTVL + N +V +T++ +GY A+QV G K V Sbjct: 30 RLGLLGRKVGMMRIFTDDGDAVPVTVLDVSNNRVTQVKTVETDGYSAIQVTFGARKASRV 89 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G + V + L EF V + G F GQ VDV G +IGKGF Sbjct: 90 TKPEAGHLAKAGVEAGEILREFAVSAEVAAEYKPGGTLPVGLFAAGQKVDVQGTSIGKGF 149 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNFG RA+HG S SH GS QDPGRVF KKM+G G T +NL++V Sbjct: 150 TGTIKRHNFGSQRASHGNSRSHNVPGSISMAQDPGRVFPGKKMSGHRGDVTKTTQNLDIV 209 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 VD+ R L+LV+G VPGA KN ++ VR + K Sbjct: 210 RVDEARQLLLVRGAVPGA-KNGFVTVRPAVKVKAK 243 >gi|302773854|ref|XP_002970344.1| hypothetical protein SELMODRAFT_267426 [Selaginella moellendorffii] gi|300161860|gb|EFJ28474.1| hypothetical protein SELMODRAFT_267426 [Selaginella moellendorffii] Length = 279 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 110/212 (51%), Positives = 147/212 (69%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K GMT V++ GRRIP+TVL D+ QVV +T+D G+ A+QVG G+ K K + Sbjct: 28 RTGLIAVKCGMTAVWDKWGRRIPITVLWADDNQVVQVKTVDHEGFNALQVGCGQKKPKQL 87 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 S P G F S V K+KL EF+V +D LLPVG+ + +F GQ +DVTG++IGKGF Sbjct: 88 SIPELGHFRSKGVPIKRKLKEFQVSED-ALLPVGTPLTVRHFVPGQFLDVTGVSIGKGFQ 146 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR F G+ A+HG S+SHRSHG+TG R+ PG+VFKNKKMAG+MG + TV + V Sbjct: 147 GPMKRWGFAGMPASHGASLSHRSHGATGGRKSPGKVFKNKKMAGQMGNRKATVFCVWVYK 206 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V+ +R LI VKG VPG K N ++ +RDS+ Sbjct: 207 VEPQRDLIWVKGQVPGCKGN-FVYIRDSWNKP 237 >gi|261338279|ref|ZP_05966163.1| 50S ribosomal protein L3 [Bifidobacterium gallicum DSM 20093] gi|270276934|gb|EFA22788.1| 50S ribosomal protein L3 [Bifidobacterium gallicum DSM 20093] Length = 216 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 86/212 (40%), Positives = 123/212 (58%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+ ++ +KLGM+ V++ G IPVT++ + V +T + +GY AVQ+G G+A + Sbjct: 7 RTALLGKKLGMSQVWDENGFFIPVTLIDVSTNVVTAVKTEETDGYNAVQLGYGQADPTKI 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KPM G F+ V+P++ L E R + + P G + F G VDVTG T GKGF+ Sbjct: 67 TKPMAGHFAKAGVTPRRHLAEVRTENVAEFEP-GQELTAELFPEGVQVDVTGTTKGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F R THG + R GS G P R+ K K+MAGRMG + TV NL ++S Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHDTNTVLNLTIMS 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + G+I VKG +PG K +LVR + K A Sbjct: 186 SDVENGIIAVKGAIPGP-KGGIVLVRSAVKGA 216 >gi|146317731|ref|YP_001197443.1| 50S ribosomal protein L3 [Streptococcus suis 05ZYH33] gi|253750987|ref|YP_003024128.1| 50S ribosomal protein L3 [Streptococcus suis SC84] gi|253752887|ref|YP_003026027.1| 50S ribosomal protein L3 [Streptococcus suis P1/7] gi|253754712|ref|YP_003027852.1| 50S ribosomal protein L3 [Streptococcus suis BM407] gi|330831920|ref|YP_004400745.1| 50S ribosomal protein L3 [Streptococcus suis ST3] gi|166234601|sp|A4VSF4|RL3_STRSY RecName: Full=50S ribosomal protein L3 gi|145688537|gb|ABP89043.1| Ribosomal protein L3 [Streptococcus suis 05ZYH33] gi|251815276|emb|CAZ50842.1| 50S ribosomal protein L3 [Streptococcus suis SC84] gi|251817176|emb|CAZ54898.1| 50S ribosomal protein L3 [Streptococcus suis BM407] gi|251819132|emb|CAR44223.1| 50S ribosomal protein L3 [Streptococcus suis P1/7] gi|292557531|gb|ADE30532.1| ribosomal protein L3 [Streptococcus suis GZ1] gi|319757241|gb|ADV69183.1| 50S ribosomal protein L3 [Streptococcus suis JS14] gi|329306143|gb|AEB80559.1| 50S ribosomal protein L3 [Streptococcus suis ST3] Length = 208 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 91/213 (42%), Positives = 128/213 (60%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYAAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGQEITVETFAAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFK K +AGRMGGNRVT++NLEVV Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGNRVTIQNLEVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+ Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAG 207 >gi|15900145|ref|NP_344749.1| 50S ribosomal protein L3 [Streptococcus pneumoniae TIGR4] gi|15902232|ref|NP_357782.1| 50S ribosomal protein L3 [Streptococcus pneumoniae R6] gi|111658801|ref|ZP_01409432.1| hypothetical protein SpneT_02000098 [Streptococcus pneumoniae TIGR4] gi|116516725|ref|YP_815712.1| 50S ribosomal protein L3 [Streptococcus pneumoniae D39] gi|148983607|ref|ZP_01816926.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP3-BS71] gi|148987945|ref|ZP_01819408.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP6-BS73] gi|148992785|ref|ZP_01822428.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP9-BS68] gi|148996630|ref|ZP_01824348.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP11-BS70] gi|149001686|ref|ZP_01826659.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP14-BS69] gi|149005958|ref|ZP_01829687.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP18-BS74] gi|149011077|ref|ZP_01832382.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP19-BS75] gi|149017897|ref|ZP_01834356.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP23-BS72] gi|168483845|ref|ZP_02708797.1| ribosomal protein L3 [Streptococcus pneumoniae CDC1873-00] gi|168486024|ref|ZP_02710532.1| ribosomal protein L3 [Streptococcus pneumoniae CDC1087-00] gi|168489686|ref|ZP_02713885.1| ribosomal protein L3 [Streptococcus pneumoniae SP195] gi|168492162|ref|ZP_02716305.1| ribosomal protein L3 [Streptococcus pneumoniae CDC0288-04] gi|168493902|ref|ZP_02718045.1| ribosomal protein L3 [Streptococcus pneumoniae CDC3059-06] gi|168576364|ref|ZP_02722247.1| ribosomal protein L3 [Streptococcus pneumoniae MLV-016] gi|169833378|ref|YP_001693741.1| 50S ribosomal protein L3 [Streptococcus pneumoniae Hungary19A-6] gi|182683188|ref|YP_001834935.1| 50S ribosomal protein L3 [Streptococcus pneumoniae CGSP14] gi|194397396|ref|YP_002036910.1| 50S ribosomal protein L3 [Streptococcus pneumoniae G54] gi|221231113|ref|YP_002510265.1| 50S ribosomal protein L3 [Streptococcus pneumoniae ATCC 700669] gi|225853815|ref|YP_002735327.1| 50S ribosomal protein L3 [Streptococcus pneumoniae JJA] gi|225855974|ref|YP_002737485.1| 50S ribosomal protein L3 [Streptococcus pneumoniae P1031] gi|225858063|ref|YP_002739573.1| 50S ribosomal protein L3 [Streptococcus pneumoniae 70585] gi|225860251|ref|YP_002741760.1| 50S ribosomal protein L3 [Streptococcus pneumoniae Taiwan19F-14] gi|237649723|ref|ZP_04523975.1| 50S ribosomal protein L3 [Streptococcus pneumoniae CCRI 1974] gi|237821421|ref|ZP_04597266.1| 50S ribosomal protein L3 [Streptococcus pneumoniae CCRI 1974M2] gi|270292000|ref|ZP_06198215.1| ribosomal protein L3 [Streptococcus sp. M143] gi|289168732|ref|YP_003447001.1| 50S ribosomal protein L3 [Streptococcus mitis B6] gi|293364347|ref|ZP_06611073.1| 50S ribosomal protein L3 [Streptococcus oralis ATCC 35037] gi|298230366|ref|ZP_06964047.1| 50S ribosomal protein L3 [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255987|ref|ZP_06979573.1| 50S ribosomal protein L3 [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502023|ref|YP_003723963.1| 50S ribosomal protein L3 [Streptococcus pneumoniae TCH8431/19A] gi|303255095|ref|ZP_07341171.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS455] gi|303259261|ref|ZP_07345239.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP-BS293] gi|303261016|ref|ZP_07346965.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP14-BS292] gi|303263344|ref|ZP_07349267.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS397] gi|303265509|ref|ZP_07351409.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS457] gi|303267933|ref|ZP_07353735.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS458] gi|306825986|ref|ZP_07459322.1| 50S ribosomal protein L3 [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|306828783|ref|ZP_07461975.1| 50S ribosomal protein L3 [Streptococcus mitis ATCC 6249] gi|307066886|ref|YP_003875852.1| hypothetical protein SPAP_0257 [Streptococcus pneumoniae AP200] gi|307126429|ref|YP_003878460.1| 50S ribosomal protein L3 [Streptococcus pneumoniae 670-6B] gi|307702686|ref|ZP_07639638.1| 50S ribosomal protein L3 (BL3) [Streptococcus oralis ATCC 35037] gi|307704065|ref|ZP_07640994.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK597] gi|307709910|ref|ZP_07646357.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK564] gi|307711054|ref|ZP_07647476.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK321] gi|315612332|ref|ZP_07887245.1| 50S ribosomal protein L3 [Streptococcus sanguinis ATCC 49296] gi|322375039|ref|ZP_08049553.1| 50S ribosomal protein L3 [Streptococcus sp. C300] gi|322377230|ref|ZP_08051722.1| 50S ribosomal protein L3 [Streptococcus sp. M334] gi|322391199|ref|ZP_08064671.1| 50S ribosomal protein L3 [Streptococcus peroris ATCC 700780] gi|331267136|ref|YP_004326766.1| 50S ribosomal protein L3 [Streptococcus oralis Uo5] gi|42559631|sp|Q8CWV8|RL3_STRR6 RecName: Full=50S ribosomal protein L3 gi|42559682|sp|Q97SV5|RL3_STRPN RecName: Full=50S ribosomal protein L3 gi|122279402|sp|Q04MN6|RL3_STRP2 RecName: Full=50S ribosomal protein L3 gi|226730574|sp|B5E6F5|RL3_STRP4 RecName: Full=50S ribosomal protein L3 gi|226730575|sp|B1I8J8|RL3_STRPI RecName: Full=50S ribosomal protein L3 gi|226730576|sp|B2IS40|RL3_STRPS RecName: Full=50S ribosomal protein L3 gi|254803693|sp|C1CAL2|RL3_STRP7 RecName: Full=50S ribosomal protein L3 gi|254803694|sp|B8ZKF7|RL3_STRPJ RecName: Full=50S ribosomal protein L3 gi|254803696|sp|C1CC06|RL3_STRZJ RecName: Full=50S ribosomal protein L3 gi|254803697|sp|C1CI97|RL3_STRZP RecName: Full=50S ribosomal protein L3 gi|254803698|sp|C1CP88|RL3_STRZT RecName: Full=50S ribosomal protein L3 gi|14971677|gb|AAK74389.1| ribosomal protein L3 [Streptococcus pneumoniae TIGR4] gi|15457732|gb|AAK98992.1| 50S Ribosomal protein L3 [Streptococcus pneumoniae R6] gi|116077301|gb|ABJ55021.1| ribosomal protein L3 [Streptococcus pneumoniae D39] gi|147757205|gb|EDK64244.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP11-BS70] gi|147760144|gb|EDK67133.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP14-BS69] gi|147762314|gb|EDK69275.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP18-BS74] gi|147764713|gb|EDK71643.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP19-BS75] gi|147923754|gb|EDK74866.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP3-BS71] gi|147926409|gb|EDK77482.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP6-BS73] gi|147928511|gb|EDK79526.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP9-BS68] gi|147931461|gb|EDK82439.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP23-BS72] gi|168995880|gb|ACA36492.1| ribosomal protein L3 [Streptococcus pneumoniae Hungary19A-6] gi|172042867|gb|EDT50913.1| ribosomal protein L3 [Streptococcus pneumoniae CDC1873-00] gi|182628522|gb|ACB89470.1| 50S ribosomal protein L3 [Streptococcus pneumoniae CGSP14] gi|183570883|gb|EDT91411.1| ribosomal protein L3 [Streptococcus pneumoniae CDC1087-00] gi|183571866|gb|EDT92394.1| ribosomal protein L3 [Streptococcus pneumoniae SP195] gi|183573583|gb|EDT94111.1| ribosomal protein L3 [Streptococcus pneumoniae CDC0288-04] gi|183576220|gb|EDT96748.1| ribosomal protein L3 [Streptococcus pneumoniae CDC3059-06] gi|183577906|gb|EDT98434.1| ribosomal protein L3 [Streptococcus pneumoniae MLV-016] gi|194357063|gb|ACF55511.1| 50S ribosomal protein L3 [Streptococcus pneumoniae G54] gi|220673573|emb|CAR68059.1| 50S ribosomal protein L3 [Streptococcus pneumoniae ATCC 700669] gi|225720422|gb|ACO16276.1| ribosomal protein L3 [Streptococcus pneumoniae 70585] gi|225722972|gb|ACO18825.1| ribosomal protein L3 [Streptococcus pneumoniae JJA] gi|225725081|gb|ACO20933.1| ribosomal protein L3 [Streptococcus pneumoniae P1031] gi|225726716|gb|ACO22567.1| ribosomal protein L3 [Streptococcus pneumoniae Taiwan19F-14] gi|270279528|gb|EFA25370.1| ribosomal protein L3 [Streptococcus sp. M143] gi|288908299|emb|CBJ23141.1| 50S ribosomal protein L3 [Streptococcus mitis B6] gi|291317193|gb|EFE57620.1| 50S ribosomal protein L3 [Streptococcus oralis ATCC 35037] gi|298237618|gb|ADI68749.1| 50S ribosomal protein L3 [Streptococcus pneumoniae TCH8431/19A] gi|301793482|emb|CBW35855.1| 50S ribosomal protein L3 [Streptococcus pneumoniae INV104] gi|301799358|emb|CBW31893.1| 50S ribosomal protein L3 [Streptococcus pneumoniae OXC141] gi|301801153|emb|CBW33826.1| 50S ribosomal protein L3 [Streptococcus pneumoniae INV200] gi|302597925|gb|EFL64995.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS455] gi|302637853|gb|EFL68339.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP14-BS292] gi|302639679|gb|EFL70136.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP-BS293] gi|302642629|gb|EFL72974.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS458] gi|302644949|gb|EFL75196.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS457] gi|302647117|gb|EFL77341.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS397] gi|304428961|gb|EFM32049.1| 50S ribosomal protein L3 [Streptococcus mitis ATCC 6249] gi|304431702|gb|EFM34682.1| 50S ribosomal protein L3 [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|306408423|gb|ADM83850.1| hypothetical protein SPAP_0257 [Streptococcus pneumoniae AP200] gi|306483491|gb|ADM90360.1| ribosomal protein L3 [Streptococcus pneumoniae 670-6B] gi|307617016|gb|EFN96194.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK321] gi|307619281|gb|EFN98410.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK564] gi|307622355|gb|EFO01363.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK597] gi|307623802|gb|EFO02787.1| 50S ribosomal protein L3 (BL3) [Streptococcus oralis ATCC 35037] gi|315315313|gb|EFU63352.1| 50S ribosomal protein L3 [Streptococcus sanguinis ATCC 49296] gi|321145952|gb|EFX41341.1| 50S ribosomal protein L3 [Streptococcus peroris ATCC 700780] gi|321280539|gb|EFX57578.1| 50S ribosomal protein L3 [Streptococcus sp. C300] gi|321281943|gb|EFX58951.1| 50S ribosomal protein L3 [Streptococcus sp. M334] gi|326683808|emb|CBZ01426.1| 50S ribosomal protein L3 [Streptococcus oralis Uo5] gi|327390628|gb|EGE88968.1| 50S ribosomal protein L3 [Streptococcus pneumoniae GA04375] gi|332075874|gb|EGI86341.1| 50S ribosomal protein L3 [Streptococcus pneumoniae GA17570] gi|332076655|gb|EGI87117.1| 50S ribosomal protein L3 [Streptococcus pneumoniae GA17545] gi|332077510|gb|EGI87971.1| 50S ribosomal protein L3 [Streptococcus pneumoniae GA41301] Length = 208 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 89/213 (41%), Positives = 129/213 (60%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNVEGLEVGAEITVETFAAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFK K +AGRMGG+RVT++NLEVV Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+ Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAG 207 >gi|242278658|ref|YP_002990787.1| ribosomal protein L3 [Desulfovibrio salexigens DSM 2638] gi|259647407|sp|C6C185|RL3_DESAD RecName: Full=50S ribosomal protein L3 gi|242121552|gb|ACS79248.1| ribosomal protein L3 [Desulfovibrio salexigens DSM 2638] Length = 210 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 87/208 (41%), Positives = 120/208 (57%), Gaps = 2/208 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 G++ +KLGMT V+ +G +PVTVL + C V+ +T +K GY A+Q+G + V Sbjct: 4 TIGLLGKKLGMTRVFADDGSVVPVTVLEVGPCPVMQVKTEEKEGYNAIQIGYDALPERKV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP +G + L EF ++ D +G S F G+ V VTG + GKGF Sbjct: 64 NKPAKGHQEKAGKGYFRHLREFPLESVAD-YELGQEISVDIFAAGEKVKVTGTSKGKGFQ 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR NF G RA+HG HRS GS G PG+VFK KKM G+MG RVTV N+E+V Sbjct: 123 GVMKRWNFAGSRASHGAEKVHRSPGSIGHATFPGKVFKGKKMPGQMGNERVTVSNIEIVD 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209 V +++VKG VPG KN +++R + Sbjct: 183 VRADENVLVVKGQVPGP-KNGLVMIRKT 209 >gi|167771267|ref|ZP_02443320.1| hypothetical protein ANACOL_02625 [Anaerotruncus colihominis DSM 17241] gi|167666518|gb|EDS10648.1| hypothetical protein ANACOL_02625 [Anaerotruncus colihominis DSM 17241] Length = 210 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 86/212 (40%), Positives = 125/212 (58%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ +V +K+GMT +++ G+ IPVTV+ C VV +T + +GY AVQ+G G+ K Sbjct: 1 MQKCIVGKKIGMTQLFDESGKMIPVTVVEAGPCVVVQKKTTENDGYEAVQLGFGDISEKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F+ V+ K+ L EFR+ D L VG + F VG VDV G++ GKG+ Sbjct: 61 VNKPLKGHFAKAGVALKRVLREFRLD-DCSALSVGDIIKADTFAVGDAVDVAGVSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR L+ THG R GS G P RVFK K + G MG VTV+NL +V Sbjct: 120 AGTIKRFGNHRLKETHGSGPVARHAGSNGACSSPSRVFKGKGLPGHMGAENVTVQNLSIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D + LI ++G +PGA K + + DS K+ Sbjct: 180 KIDAENNLIAIRGAIPGA-KGGVVFITDSVKA 210 >gi|307708060|ref|ZP_07644528.1| ribosomal protein L3 [Streptococcus mitis NCTC 12261] gi|307615845|gb|EFN95050.1| ribosomal protein L3 [Streptococcus mitis NCTC 12261] Length = 208 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 89/213 (41%), Positives = 129/213 (60%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVIEAAPNVVLQVKTVETDGYNAIQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNVEGLEVGAEITVETFAAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFK K +AGRMGG+RVT++NLEVV Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+ Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAG 207 >gi|262373521|ref|ZP_06066799.1| 50S ribosomal protein L3 [Acinetobacter junii SH205] gi|262311274|gb|EEY92360.1| 50S ribosomal protein L3 [Acinetobacter junii SH205] Length = 214 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 95/213 (44%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY A+QV GE + Sbjct: 3 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAIQVTTGERRESR 62 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFRV + + + VG FTVGQ+VDVTG + GKG Sbjct: 63 VTSAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGSIGVDLFTVGQIVDVTGQSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+ Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VS+D +R +++VKG +PG+ ++VR + K+ Sbjct: 183 VSIDAERSVLVVKGAIPGSTGGD-VIVRPTIKA 214 >gi|212288599|sp|A2SLF7|RL3_METPP RecName: Full=50S ribosomal protein L3 Length = 226 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 92/215 (42%), Positives = 124/215 (57%), Gaps = 2/215 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ RK+GM ++ +G +PVTVL + N +V +T++ +GY A+QV G K V Sbjct: 9 RLGLLGRKVGMMRIFTDDGDAVPVTVLDVSNNRVTQVKTVETDGYSAIQVTFGARKASRV 68 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G + V + L EF V + G F GQ VDV G +IGKGF Sbjct: 69 TKPEAGHLAKAGVEAGEILREFAVSAEVAAEYKPGGTLPVGLFAAGQKVDVQGTSIGKGF 128 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNFG RA+HG S SH GS QDPGRVF KKM+G G T +NL++V Sbjct: 129 TGTIKRHNFGSQRASHGNSRSHNVPGSISMAQDPGRVFPGKKMSGHRGDVTKTTQNLDIV 188 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 VD+ R L+LV+G VPGA KN ++ VR + K Sbjct: 189 RVDEARQLLLVRGAVPGA-KNGFVTVRPAVKVKAK 222 >gi|312866521|ref|ZP_07726738.1| 50S ribosomal protein L3 [Streptococcus downei F0415] gi|311097952|gb|EFQ56179.1| 50S ribosomal protein L3 [Streptococcus downei F0415] Length = 208 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 94/213 (44%), Positives = 130/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VGS + F G +VDVTG T GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSELTVEQFEAGDVVDVTGTTKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+ Sbjct: 118 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIA 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V + +IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVVPEMNVILIKGNVPGAKK-SLITIKTAVKAA 207 >gi|114797091|ref|YP_761529.1| 50S ribosomal protein L3 [Hyphomonas neptunium ATCC 15444] gi|123322946|sp|Q0BYB4|RL3_HYPNA RecName: Full=50S ribosomal protein L3 gi|114737265|gb|ABI75390.1| ribosomal protein L3 [Hyphomonas neptunium ATCC 15444] Length = 252 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 126/234 (53%), Positives = 159/234 (67%), Gaps = 17/234 (7%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK--------------NGYM 47 R+GV+ARK+GMT ++ +GR +PVTVL LD CQVV R+ ++ +GY Sbjct: 7 RTGVLARKVGMTRIFAADGRHVPVTVLSLDGCQVVGVRSEEERSVTTKKGGQVTRTDGYK 66 Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107 AV +G+G+ K KN +K +RG F+ V+PK KL EFRV D L VGS +F GQ Sbjct: 67 AVIMGSGDKKAKNTTKALRGQFAKAGVAPKAKLKEFRVSGD--LPEVGSTVQADHFAEGQ 124 Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167 LVDV+ M+IGKGF+GAMKR NF GLRA+HGVSISHR+HGSTG QDPGRVFKNKKMAG + Sbjct: 125 LVDVSAMSIGKGFAGAMKRWNFSGLRASHGVSISHRAHGSTGMNQDPGRVFKNKKMAGHL 184 Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 G RVT +NL VV D +RGLILVKG VPG +++ VRD+ K A+ + Sbjct: 185 GDERVTTQNLVVVRTDVERGLILVKGSVPG-HDGTFVEVRDAVKKALPADAPAA 237 >gi|319761138|ref|YP_004125075.1| 50S ribosomal protein l3 [Alicycliphilus denitrificans BC] gi|330822996|ref|YP_004386299.1| 50S ribosomal protein L3 [Alicycliphilus denitrificans K601] gi|317115699|gb|ADU98187.1| 50S ribosomal protein L3 [Alicycliphilus denitrificans BC] gi|329308368|gb|AEB82783.1| 50S ribosomal protein L3 [Alicycliphilus denitrificans K601] Length = 224 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 88/214 (41%), Positives = 128/214 (59%), Gaps = 3/214 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G +PVTV+ + N +V +T + +GY+A+QV G K V+K Sbjct: 8 GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVALQVTFGSRKASRVTK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121 P G + V + + EF V + G+ F VGQ VDV G +IGKG++ Sbjct: 68 PEAGHLAKAGVEAGEIIREFPVTAEVAGKYAAGATVPVADVFAVGQKVDVQGTSIGKGYA 127 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNFG RA+HG S SH GS G QDPGR+F KKM G +G VT +NL+VV Sbjct: 128 GTIKRHNFGSQRASHGNSRSHNVPGSIGMAQDPGRIFPGKKMTGHLGDATVTTQNLDVVR 187 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +D+ R L+L+KG VPG+ K ++ VR + K+ + Sbjct: 188 IDEARQLLLIKGAVPGS-KGGFVTVRPAVKAKAS 220 >gi|308235496|ref|ZP_07666233.1| 50S ribosomal protein L3 [Gardnerella vaginalis ATCC 14018] gi|311115167|ref|YP_003986388.1| 50S ribosomal protein L3 [Gardnerella vaginalis ATCC 14019] gi|310946661|gb|ADP39365.1| 50S ribosomal protein L3 [Gardnerella vaginalis ATCC 14019] Length = 216 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 121/212 (57%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+ ++ RKLGM+ V++ G +PVT++ + V +T + +GY AVQ+G G+ V Sbjct: 7 RTALLGRKLGMSQVWDENGLFVPVTLVEVATNVVTAVKTEETDGYCAVQLGYGQIDPTKV 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G F+ V+P++ L E R + D P G + F G VDVTG T GKGF+ Sbjct: 67 TKPLAGHFAKAGVTPRRHLAEVRTENAADYKP-GQELTAEVFAEGAEVDVTGTTKGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F R THG + R GS G P R+ K K+MAGRMG T NL +VS Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTSTALNLTIVS 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + G++ +KG +PG K + +LVR + K A Sbjct: 186 SDVENGILAIKGAIPGP-KGAIVLVRSAVKGA 216 >gi|210631082|ref|ZP_03296738.1| hypothetical protein COLSTE_00623 [Collinsella stercoris DSM 13279] gi|210160170|gb|EEA91141.1| hypothetical protein COLSTE_00623 [Collinsella stercoris DSM 13279] Length = 206 Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats. Identities = 90/209 (43%), Positives = 121/209 (57%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M + ++ RK+GMT V++ + +PVTV+ C V +T +GY AVQ+G G+ K K+ Sbjct: 1 MINMILGRKIGMTQVWDEDDNVVPVTVIQAGPCTVSQVKTEATDGYNAVQIGFGDIKSKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM G F+ V P + L E RV+ ++ VG V + + F VDV G + GKGF Sbjct: 61 VNKPMAGHFAKAGVEPVRYLREVRVENGEEH-KVGDVVTVADFESVAKVDVIGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR N +HG I R GS G P RV K KMAG MG RVTVKNL VV Sbjct: 120 QGRIKRWNQHRGPMSHGSHI-QRHPGSIGQCAYPARVLKGVKMAGHMGNARVTVKNLSVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +D ++ LILVKG VPG KN + +R + Sbjct: 179 RIDAEQNLILVKGAVPGG-KNGLVAIRMA 206 >gi|167629467|ref|YP_001679966.1| 50S ribosomal protein l3 [Heliobacterium modesticaldum Ice1] gi|212288399|sp|B0TC56|RL3_HELMI RecName: Full=50S ribosomal protein L3 gi|167592207|gb|ABZ83955.1| 50S ribosomal protein l3 [Heliobacterium modesticaldum Ice1] Length = 210 Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats. Identities = 91/211 (43%), Positives = 129/211 (61%), Gaps = 4/211 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 + G++ RK+GMT V+ G +PVTV+ C VV +T++K+GY AVQ+G G+ + K + Sbjct: 3 KKGLLGRKIGMTQVFADNGVAVPVTVVQAGPCVVVQKKTVEKDGYEAVQIGFGDVREKLL 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP RG + V + L E +V D+ VG F+ G+ VDV G + GKGF+ Sbjct: 63 NKPKRGHLKNAGVRLVRVLREIKVDSMDE-YKVGQELKADVFSAGEYVDVVGTSKGKGFA 121 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNF HG S HR GS G + P R+FK +KM GRMG RVTV+ L+VV Sbjct: 122 GGIKRHNFKRGPMKHG-SKYHRRPGSAGAKG-PARIFKGRKMPGRMGNERVTVQKLQVVR 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPG K+ +L++ S K+ Sbjct: 180 VDAERNLLLIKGAVPGPKRG-LLLIKSSIKA 209 >gi|125716985|ref|YP_001034118.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK36] gi|323350940|ref|ZP_08086598.1| 50S ribosomal protein L3 [Streptococcus sanguinis VMC66] gi|166234600|sp|A3CK63|RL3_STRSV RecName: Full=50S ribosomal protein L3 gi|125496902|gb|ABN43568.1| 50S ribosomal protein L3, putative [Streptococcus sanguinis SK36] gi|322122922|gb|EFX94628.1| 50S ribosomal protein L3 [Streptococcus sanguinis VMC66] gi|324990002|gb|EGC21943.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK353] gi|324991815|gb|EGC23740.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK405] gi|324996295|gb|EGC28203.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK678] gi|325686405|gb|EGD28435.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK72] gi|325695810|gb|EGD37707.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK150] gi|325697976|gb|EGD39859.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK160] gi|327458431|gb|EGF04787.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK1] gi|327463723|gb|EGF10039.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK1057] gi|327467335|gb|EGF12835.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK330] gi|327471742|gb|EGF17183.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK408] gi|327490463|gb|EGF22245.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK1058] gi|328945217|gb|EGG39371.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK1087] Length = 208 Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats. Identities = 91/213 (42%), Positives = 131/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVVEAAPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVT++NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTIQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+ Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAG 207 >gi|226942778|ref|YP_002797851.1| 50S ribosomal protein L3 [Azotobacter vinelandii DJ] gi|226717705|gb|ACO76876.1| 50S ribosomal protein L3 [Azotobacter vinelandii DJ] Length = 200 Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats. Identities = 89/201 (44%), Positives = 128/201 (63%), Gaps = 3/201 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++ EG +PVTV+ ++ +V + + +GY+AVQV GE + V+K G F+ Sbjct: 1 MTRIFTEEGVSVPVTVIEIEPNRVTQFKNAESDGYLAVQVTVGERRASRVTKAQAGHFAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 NV+ + ++EFR+++ + G + F GQLVDVTG + GKG++G +KR NF G Sbjct: 61 ANVAAGRGVWEFRLEEGE--YQSGDQITVEIFQAGQLVDVTGQSKGKGYAGTIKRWNFRG 118 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 THG S+SHR GS G Q PGRVFK KKM+G +G RVTV++LEVV VD +R L+LV Sbjct: 119 QDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHLGAERVTVQSLEVVRVDSERNLLLV 178 Query: 192 KGCVPGAKKNSWILVRDSFKS 212 KG +PGA ++VR + K+ Sbjct: 179 KGAIPGATGGD-VIVRPAAKA 198 >gi|326385099|ref|ZP_08206769.1| 50S ribosomal protein L3 [Gordonia neofelifaecis NRRL B-59395] gi|326196184|gb|EGD53388.1| 50S ribosomal protein L3 [Gordonia neofelifaecis NRRL B-59395] Length = 218 Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats. Identities = 93/214 (43%), Positives = 127/214 (59%), Gaps = 2/214 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 G++ KLGMT V++ R +PVTV+ + V RT D++GY A+Q+ G + V Sbjct: 7 TKGILGTKLGMTQVFDENNRVVPVTVIATGSNVVTQLRTADRDGYTAIQLAYGAIDPRKV 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G F+ V+P++ L E R+ D VG F G VDVTG + GKGF+ Sbjct: 67 NKPVAGQFAKAGVTPRRHLTEIRI-NDISEFEVGQELGADIFAEGVKVDVTGTSKGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F GL A+HG HRS GS G PGRVFK +MAGRMG ++VT +NL V Sbjct: 126 GVMKRHGFAGLGASHGAHRVHRSPGSIGGCATPGRVFKGTRMAGRMGSDKVTTQNLTVHK 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 VD + GL+L+KG +PG +K ++VRD+ K Sbjct: 186 VDAEAGLLLIKGAIPG-RKGGIVVVRDAVKGGAK 218 >gi|299820955|ref|ZP_07052844.1| 50S ribosomal protein L3 [Listeria grayi DSM 20601] gi|299817976|gb|EFI85211.1| 50S ribosomal protein L3 [Listeria grayi DSM 20601] Length = 209 Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats. Identities = 88/212 (41%), Positives = 124/212 (58%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T+D +GY AVQ+G + K Sbjct: 1 MTKGILGRKVGMTQVFTENGELIPVTVIEAAENVVLQKKTVDTDGYEAVQIGFENKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G N +PK+ + E R + D +G+ F G +VD TG++ GKGF Sbjct: 61 SNKPEKGHVVKANTTPKRFIREIR-DVNLDEYEIGAEVKVDVFAEGDIVDATGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK + GRMGG +VT++NLE+V Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQVTIQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + ++LVKG VPGAKK S + ++ + K+ Sbjct: 178 KVDVDKNILLVKGNVPGAKK-SLVQIKTAVKA 208 >gi|126643095|ref|YP_001086079.1| 50S ribosomal protein L3 [Acinetobacter baumannii ATCC 17978] gi|184159598|ref|YP_001847937.1| 50S ribosomal protein L3 [Acinetobacter baumannii ACICU] gi|260557027|ref|ZP_05829244.1| 50S ribosomal protein L3 [Acinetobacter baumannii ATCC 19606] gi|212288243|sp|B2HZM2|RL3_ACIBC RecName: Full=50S ribosomal protein L3 gi|183211192|gb|ACC58590.1| 50S ribosomal protein L3 [Acinetobacter baumannii ACICU] gi|260409633|gb|EEX02934.1| 50S ribosomal protein L3 [Acinetobacter baumannii ATCC 19606] Length = 214 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 98/213 (46%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY AVQV GE + Sbjct: 3 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 62 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFRV + + + VG FTVGQ+VDVTG + GKG Sbjct: 63 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+ Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VSVD +R +++VKG +PGA ++VR + K+ Sbjct: 183 VSVDTERSVLVVKGAIPGATGGD-VIVRPTIKA 214 >gi|325964166|ref|YP_004242072.1| 50S ribosomal protein L3P [Arthrobacter phenanthrenivorans Sphe3] gi|323470253|gb|ADX73938.1| LSU ribosomal protein L3P [Arthrobacter phenanthrenivorans Sphe3] Length = 216 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 91/211 (43%), Positives = 125/211 (59%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ + IPVTV+ D+ + R + +GY+AVQ+G G+ + V+ Sbjct: 8 KGLLGTKLGMTQVWDENNKLIPVTVVQADSNVITQLRNAEADGYVAVQIGYGQIDPRKVT 67 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F V+P++ + E R D +G S F GQ +DV G T GKGF+G Sbjct: 68 KPLAGHFEKAGVTPRRHVVELR-TADAAEYELGQELSVEVFEAGQKIDVIGTTKGKGFAG 126 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G P RVFK KMAGRMG R T NL V +V Sbjct: 127 VMKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGMKMAGRMGAVRHTTLNLTVHAV 186 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++ L+L+KG VPGA + +LVR + K A Sbjct: 187 DVEKSLLLIKGAVPGA-RGQVVLVRTAVKGA 216 >gi|317501774|ref|ZP_07959960.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 8_1_57FAA] gi|331088705|ref|ZP_08337615.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 3_1_46FAA] gi|316896807|gb|EFV18892.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 8_1_57FAA] gi|330407228|gb|EGG86731.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 3_1_46FAA] Length = 227 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 87/229 (37%), Positives = 123/229 (53%), Gaps = 20/229 (8%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV- 58 M+ ++A K+GMT ++N +G IPVTVL C V +T++ +GY AVQVG + K Sbjct: 1 MKKAILATKVGMTQIFNHEDGVLIPVTVLQAGPCVVTQVKTVENDGYSAVQVGYVDKKDK 60 Query: 59 ---------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103 V+K +G F VS K+ + EFR ++ + F Sbjct: 61 IVTKDGSGRKAIAHRNGVTKAEKGHFDKAGVSGKRYVKEFRFDNAEE-YALAQEIKADIF 119 Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 G +D T ++ GKGF GA+KRH THG S HR GS G DP +VFK KKM Sbjct: 120 AEGDHIDATAISKGKGFQGAIKRHGQSRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKM 178 Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G+MG ++TV+NLE+V VD + L+LVKG VPG KK + ++++ K Sbjct: 179 PGQMGNKKITVQNLEIVRVDAENNLLLVKGSVPGPKK-CLVTIKETVKG 226 >gi|154483187|ref|ZP_02025635.1| hypothetical protein EUBVEN_00888 [Eubacterium ventriosum ATCC 27560] gi|149735995|gb|EDM51881.1| hypothetical protein EUBVEN_00888 [Eubacterium ventriosum ATCC 27560] Length = 198 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 86/202 (42%), Positives = 117/202 (57%), Gaps = 5/202 (2%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++N G +PVTVL C V +T++ +GY AVQVG + + K V+KP++G F Sbjct: 1 MTQIFNEAGELVPVTVLQAGPCVVTQVKTIENDGYEAVQVGFEDIREKLVNKPVKGMFDK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 VS K+ + EF+++ + V F G +D T + GKGF GA+KRH Sbjct: 61 AGVSYKRYVREFKLEGE---YSVKDEIKVDVFEAGDKIDATAIAKGKGFQGAIKRHGQSR 117 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 HG S HR GS G P RVFK KKM G MGG +VT +NLEVV VD ++ L+LV Sbjct: 118 GPMAHG-SKYHRHAGSNGSCSTPSRVFKGKKMPGHMGGKKVTTQNLEVVRVDAEKNLLLV 176 Query: 192 KGCVPGAKKNSWILVRDSFKSA 213 KG VPG KK S + +++S K+ Sbjct: 177 KGAVPGPKK-SLVTIKESVKAG 197 >gi|329945684|ref|ZP_08293414.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 170 str. F0386] gi|328528492|gb|EGF55466.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 170 str. F0386] Length = 222 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 90/209 (43%), Positives = 128/209 (61%), Gaps = 2/209 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ KLGMT +++ G PVTV+ +D V RT++ +GY AVQ+ G+ + V+KP Sbjct: 16 LLGTKLGMTQIWDENGVLRPVTVVRVDTNVVTQVRTIETDGYEAVQLAFGDINARKVTKP 75 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + G F+ V P++ + E R + P G + F VGQLVDVTG + GKGF+G M Sbjct: 76 LAGHFAKAGVEPRRHVAEVRTSLASEFTP-GQELAADTFEVGQLVDVTGTSKGKGFAGVM 134 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH F G+ A+HG +HR GS G PGR+FK +MAGRMG R TV+NL++ VD Sbjct: 135 KRHGFAGVGASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGHARRTVQNLKIRGVDV 194 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +G++LV G +PG K S ++VR + K A Sbjct: 195 DKGVLLVNGAIPGP-KGSVVVVRTAVKGA 222 >gi|169794594|ref|YP_001712387.1| 50S ribosomal protein L3 [Acinetobacter baumannii AYE] gi|213158835|ref|YP_002320833.1| ribosomal protein L3 [Acinetobacter baumannii AB0057] gi|215482183|ref|YP_002324365.1| Ribosomal protein L3 family protein [Acinetobacter baumannii AB307-0294] gi|239503234|ref|ZP_04662544.1| 50S ribosomal protein L3 [Acinetobacter baumannii AB900] gi|294839747|ref|ZP_06784430.1| 50S ribosomal protein L3 [Acinetobacter sp. 6013113] gi|294842653|ref|ZP_06787336.1| 50S ribosomal protein L3 [Acinetobacter sp. 6014059] gi|294860425|ref|ZP_06798194.1| 50S ribosomal protein L3 [Acinetobacter sp. 6013150] gi|301345010|ref|ZP_07225751.1| 50S ribosomal protein L3 [Acinetobacter baumannii AB056] gi|301512059|ref|ZP_07237296.1| 50S ribosomal protein L3 [Acinetobacter baumannii AB058] gi|301596104|ref|ZP_07241112.1| 50S ribosomal protein L3 [Acinetobacter baumannii AB059] gi|226725115|sp|B7GW02|RL3_ACIB3 RecName: Full=50S ribosomal protein L3 gi|226725116|sp|B7IA39|RL3_ACIB5 RecName: Full=50S ribosomal protein L3 gi|226725118|sp|B0V6W8|RL3_ACIBY RecName: Full=50S ribosomal protein L3 gi|226725207|sp|A3M983|RL3_ACIBT RecName: Full=50S ribosomal protein L3 gi|169147521|emb|CAM85382.1| 50S ribosomal protein L3 [Acinetobacter baumannii AYE] gi|193078477|gb|ABO13477.2| 50S ribosomal protein L3 [Acinetobacter baumannii ATCC 17978] gi|213057995|gb|ACJ42897.1| ribosomal protein L3 [Acinetobacter baumannii AB0057] gi|213985898|gb|ACJ56197.1| Ribosomal protein L3 family protein [Acinetobacter baumannii AB307-0294] gi|322509508|gb|ADX04962.1| 50S ribosomal protein L3 [Acinetobacter baumannii 1656-2] gi|323519528|gb|ADX93909.1| 50S ribosomal protein L3 [Acinetobacter baumannii TCDC-AB0715] Length = 212 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 98/213 (46%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY AVQV GE + Sbjct: 1 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFRV + + + VG FTVGQ+VDVTG + GKG Sbjct: 61 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+ Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VSVD +R +++VKG +PGA ++VR + K+ Sbjct: 181 VSVDTERSVLVVKGAIPGATGGD-VIVRPTIKA 212 >gi|152980599|ref|YP_001355101.1| large subunit ribosomal protein L3 [Janthinobacterium sp. Marseille] gi|212288401|sp|A6T3K4|RL3_JANMA RecName: Full=50S ribosomal protein L3 gi|151280676|gb|ABR89086.1| large subunit ribosomal protein L3 [Janthinobacterium sp. Marseille] Length = 224 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 97/213 (45%), Positives = 126/213 (59%), Gaps = 2/213 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G IPVTVL + N +V +T + +GY AVQV G + V+K Sbjct: 10 GLLGRKVGMMRIFTDDGDSIPVTVLDVSNNRVTQIKTSEVDGYSAVQVAFGSRRASRVNK 69 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQK-DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 G F+ V L EFRV L VG V + S F VGQ VDV G+TIGKG++G Sbjct: 70 ASAGHFAKAGVEAGTVLKEFRVAATAASELKVGDVIAASLFEVGQKVDVQGVTIGKGYAG 129 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR+NFG RATHG S SH GS G QDPGRVF K+M G +G T +NLE+ + Sbjct: 130 VIKRYNFGSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTRTTQNLEIARI 189 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D R L+LVKG VPGA KN ++V + K Sbjct: 190 DADRQLLLVKGAVPGA-KNGQVIVSPAVKVKAK 221 >gi|23336501|ref|ZP_00121715.1| COG0087: Ribosomal protein L3 [Bifidobacterium longum DJO10A] gi|23466130|ref|NP_696733.1| 50S ribosomal protein L3 [Bifidobacterium longum NCC2705] gi|189440569|ref|YP_001955650.1| 50S ribosomal protein L3 [Bifidobacterium longum DJO10A] gi|227546476|ref|ZP_03976525.1| ribosomal protein L3 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239621010|ref|ZP_04664041.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|296454870|ref|YP_003662014.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. longum JDM301] gi|312133874|ref|YP_004001213.1| rplc [Bifidobacterium longum subsp. longum BBMN68] gi|317483450|ref|ZP_07942440.1| 50S ribosomal protein L3 [Bifidobacterium sp. 12_1_47BFAA] gi|322689929|ref|YP_004209663.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. infantis 157F] gi|322691870|ref|YP_004221440.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. longum JCM 1217] gi|42559648|sp|Q8G417|RL3_BIFLO RecName: Full=50S ribosomal protein L3 gi|226725135|sp|B3DQ13|RL3_BIFLD RecName: Full=50S ribosomal protein L3 gi|23326866|gb|AAN25369.1| 50S ribosomal protein L3 [Bifidobacterium longum NCC2705] gi|189429004|gb|ACD99152.1| Ribosomal protein L3 [Bifidobacterium longum DJO10A] gi|227213025|gb|EEI80904.1| ribosomal protein L3 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239516111|gb|EEQ55978.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|291516469|emb|CBK70085.1| LSU ribosomal protein L3P [Bifidobacterium longum subsp. longum F8] gi|296184302|gb|ADH01184.1| ribosomal protein L3 [Bifidobacterium longum subsp. longum JDM301] gi|311773167|gb|ADQ02655.1| RplC [Bifidobacterium longum subsp. longum BBMN68] gi|316915136|gb|EFV36568.1| 50S ribosomal protein L3 [Bifidobacterium sp. 12_1_47BFAA] gi|320456726|dbj|BAJ67348.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. longum JCM 1217] gi|320461265|dbj|BAJ71885.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. infantis 157F] Length = 213 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 118/212 (55%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R ++ +KLGM+ V++ G +PVT++ + V +T + +GY AVQ+G G V Sbjct: 4 RKALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKTEESDGYKAVQLGYGAIDPTKV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G F+ V+P++ L E R D D G + F G VDVTG T GKGF+ Sbjct: 64 TKPLAGHFAKAGVTPRRHLVEVRTD-DVDQFEAGQELAADLFEEGAEVDVTGTTKGKGFA 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F R THG + R GS G P R+ K K+MAGRMG T +NL VVS Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTATTQNLTVVS 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + G++ +KG +PG K +LVR + K A Sbjct: 183 ADVENGILAIKGAIPGP-KGGIVLVRSAVKGA 213 >gi|256380598|ref|YP_003104258.1| ribosomal protein L3 [Actinosynnema mirum DSM 43827] gi|255924901|gb|ACU40412.1| ribosomal protein L3 [Actinosynnema mirum DSM 43827] Length = 216 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 122/212 (57%), Gaps = 2/212 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ R +PVTV+ + V RT + +GY AVQ+ G + V Sbjct: 7 KGLLGTKLGMTQVFDENNRVVPVTVVKAEPNVVTQVRTQENDGYSAVQLAFGAIDPRKVI 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ V+P++ L E R D VG + F G +VDV G + GKG++G Sbjct: 67 KPVAGHFAKAGVTPRRHLAELRTT-DASEYQVGQEITAEVFEAGAVVDVVGTSRGKGYAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F GL A+HG HRS GS G PGRVFK +MAGRMG RVT +NL+V V Sbjct: 126 VMKRHGFAGLGASHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGHARVTTQNLKVFRV 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D + GL+L+KG VPG K + V+ + K Sbjct: 186 DAESGLLLIKGAVPGP-KGGTVFVKTAAKGGA 216 >gi|171741273|ref|ZP_02917080.1| hypothetical protein BIFDEN_00348 [Bifidobacterium dentium ATCC 27678] gi|283455366|ref|YP_003359930.1| 50S ribosomal protein L3 [Bifidobacterium dentium Bd1] gi|306823568|ref|ZP_07456943.1| 50S ribosomal protein L3 [Bifidobacterium dentium ATCC 27679] gi|309802910|ref|ZP_07697011.1| 50S ribosomal protein L3 [Bifidobacterium dentium JCVIHMP022] gi|171276887|gb|EDT44548.1| hypothetical protein BIFDEN_00348 [Bifidobacterium dentium ATCC 27678] gi|283102000|gb|ADB09106.1| rplC 50S ribosomal protein L3 [Bifidobacterium dentium Bd1] gi|304553275|gb|EFM41187.1| 50S ribosomal protein L3 [Bifidobacterium dentium ATCC 27679] gi|308220377|gb|EFO76688.1| 50S ribosomal protein L3 [Bifidobacterium dentium JCVIHMP022] Length = 213 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 82/212 (38%), Positives = 122/212 (57%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+ ++ +KLGM+ V++ G +PVT++ + V ++ + +GY AVQ+G G+ V Sbjct: 4 RTALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKSEESDGYKAVQLGYGQVDPTKV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G F+ V+P++ L E R ++ P G + F G LVDVTG T GKGF+ Sbjct: 64 TKPLAGHFAKAGVTPRRHLAEVRTDNAEEFEP-GQELTAELFPEGTLVDVTGTTKGKGFA 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F R THG + R GS G P R+ K K+MAGRMG T +NL +VS Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTNTAQNLTIVS 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + G++ +KG +PG K +LVR + K A Sbjct: 183 SDVENGVLAIKGAIPGP-KGGIVLVRSAVKGA 213 >gi|293610824|ref|ZP_06693124.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827168|gb|EFF85533.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 212 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 97/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY AVQV GE + Sbjct: 1 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFRV + + + VG FTVGQ+VDVTG + GKG Sbjct: 61 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQVVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+ Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VS+D +R +++VKG +PGA ++VR + K+ Sbjct: 181 VSIDAERSVLVVKGAIPGATGGD-VIVRPTIKA 212 >gi|329116829|ref|ZP_08245546.1| 50S ribosomal protein L3 [Streptococcus parauberis NCFD 2020] gi|326907234|gb|EGE54148.1| 50S ribosomal protein L3 [Streptococcus parauberis NCFD 2020] Length = 208 Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 93/213 (43%), Positives = 130/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTETGEFIPVTVIEAAANVVLQVKTIETDGYEAVQVGFDDKREIL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VGS + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGSEITVDTFVAGDIVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ IL+KG VPGAKK S I ++ + K+A Sbjct: 176 QVIPEKNAILIKGNVPGAKK-SLITIKSAVKAA 207 >gi|302388712|ref|YP_003824533.1| LSU ribosomal protein L3P [Thermosediminibacter oceani DSM 16646] gi|302199340|gb|ADL06910.1| LSU ribosomal protein L3P [Thermosediminibacter oceani DSM 16646] Length = 209 Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 89/210 (42%), Positives = 129/210 (61%), Gaps = 4/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 ++ KLGMT +++ G+ +PVTV+ C V+ +T + +GY A++VG + K ++ Sbjct: 4 KAILGIKLGMTQIFDEAGQAVPVTVVEAGPCVVMQKKTPEIDGYSALKVGFVDVKEHRLT 63 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F + PKK + E ++ + D VG F G+ VDVTG++IGKGF+G Sbjct: 64 KPVLGQFRKYQLKPKKYIRELKIDE-VDKYNVGDEIKVDIFKPGERVDVTGISIGKGFAG 122 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF +HG S+ HR GS G DP RVFK KKM G +G RVTV+NLE+V V Sbjct: 123 GVKRWNFNRGPMSHG-SMYHRRPGSGGA-TDPERVFKGKKMPGHLGHERVTVQNLEIVKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPG KK S + ++ + KS Sbjct: 181 DPERNLLLIKGSVPGTKK-SLLYIKSTVKS 209 >gi|56751874|ref|YP_172575.1| 50S ribosomal protein L3 [Synechococcus elongatus PCC 6301] gi|81301041|ref|YP_401249.1| 50S ribosomal protein L3 [Synechococcus elongatus PCC 7942] gi|3122742|sp|O24689|RL3_SYNP6 RecName: Full=50S ribosomal protein L3 gi|109893565|sp|Q31L07|RL3_SYNE7 RecName: Full=50S ribosomal protein L3 gi|2446890|dbj|BAA22449.1| 50S ribosomal protein L3 [Synechococcus elongatus PCC 6301] gi|56686833|dbj|BAD80055.1| 50S ribosomal protein L3 [Synechococcus elongatus PCC 6301] gi|81169922|gb|ABB58262.1| LSU ribosomal protein L3P [Synechococcus elongatus PCC 7942] Length = 213 Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 85/209 (40%), Positives = 120/209 (57%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT +++ G+ +PVTV+ C + +T+ +GY A+Q+G E + K Sbjct: 1 MSIGILGTKLGMTQIFDESGKAVPVTVIQAGPCPITQIKTVATDGYNAIQIGFLEVREKQ 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SKP G S P + L E+RV D L +G + F GQ VDV G TIG+GF Sbjct: 61 LSKPELGHLSKAGAPPLRHLLEYRV-PSTDGLELGQALTADRFEAGQKVDVQGHTIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F +HG S +HR GSTG PGRV+ K+MAGR G ++ T++ L VV Sbjct: 120 TGYQKRHGFARGPMSHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGRSGNDKTTIRGLTVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VD R L+LVKG VPG + + + + Sbjct: 179 RVDADRNLLLVKGSVPGKP-GALLNITPA 206 >gi|225376409|ref|ZP_03753630.1| hypothetical protein ROSEINA2194_02051 [Roseburia inulinivorans DSM 16841] gi|225211785|gb|EEG94139.1| hypothetical protein ROSEINA2194_02051 [Roseburia inulinivorans DSM 16841] Length = 227 Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 85/229 (37%), Positives = 120/229 (52%), Gaps = 19/229 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58 M+ ++A K+GMT ++N +G +PVTVL C V +T++ +GY AVQV + K Sbjct: 1 MKKAILATKVGMTQIFNADGVLVPVTVLEAGPCSVTQIKTVENDGYSAVQVAFADKKERI 60 Query: 59 --------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V+K G F+ VS K+ + EF+ + + +G V F Sbjct: 61 VNKDANGKKEIRNRHGVNKAQMGHFAKAGVSGKRFVKEFKFENAAE-YNLGDVIKADIFA 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G +D T ++ GKGF GA+KR HG S HR GS G P RVFK K M Sbjct: 120 EGDKIDATAISKGKGFQGAIKRFGQHRGPMAHG-SKFHRHQGSNGACSSPSRVFKGKGMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 G MG +VT +NLEVV VD + L+LVKG VPGAKK + ++++ K+ Sbjct: 179 GHMGSVKVTTQNLEVVRVDAENNLLLVKGAVPGAKK-CLVTIKETVKAG 226 >gi|260886876|ref|ZP_05898139.1| 50S ribosomal protein L3 [Selenomonas sputigena ATCC 35185] gi|330839326|ref|YP_004413906.1| 50S ribosomal protein L3 [Selenomonas sputigena ATCC 35185] gi|260863475|gb|EEX77975.1| 50S ribosomal protein L3 [Selenomonas sputigena ATCC 35185] gi|329747090|gb|AEC00447.1| 50S ribosomal protein L3 [Selenomonas sputigena ATCC 35185] Length = 219 Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 98/221 (44%), Positives = 133/221 (60%), Gaps = 5/221 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ RKLGMT ++ EG +PVTV+ N V++++T++ +GY AVQ+G GE K K Sbjct: 1 MSKAILGRKLGMTQIFTEEGTVVPVTVVESGNNVVIMNKTVENDGYNAVQIGFGEVKEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F+ V+P + + E R+ D VG F G LVDVTG + GKGF Sbjct: 61 VTKPLKGHFAKAGVAPVRFIREMRLT-DASEYNVGDTIGVDIFAAGDLVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KRHNF HG S SHR GSTG GRV K KK+ G+MG RVTV+ L Sbjct: 120 AGTIKRHNFARGPMGHG-SKSHREPGSTGAMISGHGGRVLKGKKLPGQMGHARVTVQRLS 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 VV VD +R LIL+KG +PG KK ++VR + K K + Sbjct: 179 VVRVDAERNLILIKGAIPGPKKG-LVVVRATVKPDKPKKAE 218 >gi|300742057|ref|ZP_07072078.1| 50S ribosomal protein L3 [Rothia dentocariosa M567] gi|311111973|ref|YP_003983195.1| 50S ribosomal protein L3 [Rothia dentocariosa ATCC 17931] gi|300381242|gb|EFJ77804.1| 50S ribosomal protein L3 [Rothia dentocariosa M567] gi|310943467|gb|ADP39761.1| 50S ribosomal protein L3 [Rothia dentocariosa ATCC 17931] Length = 218 Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 88/211 (41%), Positives = 122/211 (57%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ +G+ +PVTV+ D+ + R + +GY AVQ+G G + V+ Sbjct: 10 KGLLGTKLGMTQVWDEDGKVVPVTVVKADSNVITQIRNQETDGYHAVQIGFGSIDSRKVT 69 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F V+P++ L E R D +G + F GQ VDV G T GKGF+G Sbjct: 70 KPLAGHFEKAGVTPRRHLVELR-TADAAEYSLGQELTVEMFEPGQKVDVVGKTKGKGFAG 128 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G P RVFK +MAGRMG R T NL + V Sbjct: 129 VMKRHGFKGVGASHGQHKNHRKPGSIGGASYPARVFKGMRMAGRMGAARHTTLNLTIQGV 188 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + ++L+KG +PG K +LVR + K A Sbjct: 189 DAENNVLLIKGAIPGP-KGGVVLVRTAVKGA 218 >gi|212716611|ref|ZP_03324739.1| hypothetical protein BIFCAT_01540 [Bifidobacterium catenulatum DSM 16992] gi|225351045|ref|ZP_03742068.1| hypothetical protein BIFPSEUDO_02627 [Bifidobacterium pseudocatenulatum DSM 20438] gi|212660315|gb|EEB20890.1| hypothetical protein BIFCAT_01540 [Bifidobacterium catenulatum DSM 16992] gi|225158501|gb|EEG71743.1| hypothetical protein BIFPSEUDO_02627 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 213 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 83/212 (39%), Positives = 122/212 (57%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+ ++ +KLGM+ V++ G +PVT++ + V ++ + +GY AVQ+G G+ V Sbjct: 4 RTALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKSEESDGYKAVQLGYGQVDPTKV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G F+ V+P++ L E R ++ P G + F G LVDVTG T GKGF+ Sbjct: 64 TKPLAGHFAKAGVTPRRHLAEVRTDNAEEFEP-GQELTAELFPEGTLVDVTGTTKGKGFA 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F R THG + R GS G P R+ K K+MAGRMG T NL +VS Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTNTTLNLTIVS 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + G++ +KG +PG K S +LVR + K A Sbjct: 183 SDVENGVLAIKGAIPGP-KGSIVLVRSAVKGA 213 >gi|121592712|ref|YP_984608.1| 50S ribosomal protein L3 [Acidovorax sp. JS42] gi|222109493|ref|YP_002551757.1| 50S ribosomal protein l3 [Acidovorax ebreus TPSY] gi|166233110|sp|A1W2Q7|RL3_ACISJ RecName: Full=50S ribosomal protein L3 gi|254803670|sp|B9MB73|RL3_DIAST RecName: Full=50S ribosomal protein L3 gi|120604792|gb|ABM40532.1| LSU ribosomal protein L3P [Acidovorax sp. JS42] gi|221728937|gb|ACM31757.1| ribosomal protein L3 [Acidovorax ebreus TPSY] Length = 224 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 90/214 (42%), Positives = 129/214 (60%), Gaps = 3/214 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G +PVTV+ + N +V +T + +GY+++QV G K V+K Sbjct: 8 GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVSLQVTFGSRKASRVTK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121 P G + V + + EFRV + G+ F VGQ VDV G +IGKGF+ Sbjct: 68 PEAGHLAKAGVEAGEIIREFRVTPEVAGKYAAGAAVPVADVFAVGQKVDVQGTSIGKGFA 127 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNFG RA+HG S SH GS G QDPGRVF KKM G +G VT +NL+VV Sbjct: 128 GTIKRHNFGSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKKMTGHLGDVTVTTQNLDVVR 187 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +D+ R L+L+KG VPG+ K ++ VR + K+ + Sbjct: 188 IDEARQLLLIKGAVPGS-KGGFVTVRPAVKAQAS 220 >gi|78484640|ref|YP_390565.1| ribosomal protein L3 [Thiomicrospira crunogena XCL-2] gi|109893569|sp|Q31IY2|RL3_THICR RecName: Full=50S ribosomal protein L3 gi|78362926|gb|ABB40891.1| LSU ribosomal protein L3P [Thiomicrospira crunogena XCL-2] Length = 212 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 93/213 (43%), Positives = 127/213 (59%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GV+ K+GMT V+N +G PVTV+ + ++ + + +GY A+QV G Sbjct: 1 MGIGVIGTKVGMTRVFNEDGVSTPVTVVEVSPNRITQIKNNETDGYDAIQVTFGSKHAGR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQK--DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 VSKP G ++ V + L+EFR+ + + L GS + F +VDV+G T GK Sbjct: 61 VSKPEAGHYAKAGVEAGQGLWEFRLDDVSEVEGLEPGSEITVEKFNDVAVVDVSGTTKGK 120 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G +KRHNF ATHG S+SHR+ GS G Q PGRVFK KKMAG MG + T NLE Sbjct: 121 GFQGGVKRHNFKMQDATHGNSVSHRAPGSIGQNQTPGRVFKGKKMAGHMGNVKQTTLNLE 180 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +V VD + L+L+KG +PGA K S ++VR + K Sbjct: 181 LVKVDVENSLLLIKGALPGA-KGSTVIVRKAIK 212 >gi|88812757|ref|ZP_01128003.1| 50S ribosomal protein L3 [Nitrococcus mobilis Nb-231] gi|88789995|gb|EAR21116.1| 50S ribosomal protein L3 [Nitrococcus mobilis Nb-231] Length = 219 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 94/212 (44%), Positives = 130/212 (61%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ +G +PVTV+ ++ HR DK+GY A+QV G + Sbjct: 1 MAIGIVGRKCGMTRLFAEDGTSVPVTVVEAAPNRITQHRREDKDGYSAIQVTTGTRRPAR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGS-VFSPSYFTVGQLVDVTGMTIGKG 119 V+KP G + V V + L+EFR+ + + + F VGQ VDVT T GKG Sbjct: 61 VNKPQAGHVAKVGVEMGRGLWEFRLPRGVETESSDNNELRVDQFVVGQRVDVTSRTKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRH+F ATHG S+SHR+ GS G QDPGRVFK K MAG +G R TV+NLE+ Sbjct: 121 FAGTVKRHHFRTQDATHGNSLSHRAPGSIGQNQDPGRVFKGKAMAGHLGAVRRTVQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R L+++KG VPG+ + ++VR + K Sbjct: 181 VRVDTERNLLIIKGAVPGSP-GADVVVRPAIK 211 >gi|291457202|ref|ZP_06596592.1| 50S ribosomal protein L3 [Bifidobacterium breve DSM 20213] gi|291381037|gb|EFE88555.1| 50S ribosomal protein L3 [Bifidobacterium breve DSM 20213] Length = 213 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 85/212 (40%), Positives = 118/212 (55%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R ++ +KLGM+ V++ G +PVT++ + V +T + +GY AVQ+G G V Sbjct: 4 RKALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKTEESDGYKAVQLGYGAIDPTKV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G F+ V+P++ L E R D D G + F G VDVTG T GKGF+ Sbjct: 64 TKPLAGHFAKAGVTPRRHLVEVRTD-DVDQFEAGQELAADLFEEGTEVDVTGTTKGKGFA 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F R THG + R GS G P R+ K K+MAGRMG T +NL VVS Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTATTQNLTVVS 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + G+I +KG +PG K +LVR + K A Sbjct: 183 ADVENGIIAIKGAIPGP-KGGIVLVRSAVKGA 213 >gi|37519654|ref|NP_923031.1| 50S ribosomal protein L3 [Gloeobacter violaceus PCC 7421] gi|42559594|sp|Q7NPH0|RL3_GLOVI RecName: Full=50S ribosomal protein L3 gi|35210645|dbj|BAC88026.1| 50S ribosomal protein L3 [Gloeobacter violaceus PCC 7421] Length = 215 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 87/218 (39%), Positives = 121/218 (55%), Gaps = 3/218 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RKLGMT +++ EGR IPVTV+ C V ++ +GY AVQ+G G A+ K Sbjct: 1 MSLGILGRKLGMTQIFDEEGRAIPVTVVEAGPCPVTQVKSEATDGYTAVQLGFGTAREKV 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G + + D G + F GQLVDV G +IGKGF Sbjct: 61 LTRPEVGHCKKAGLEAPVRHLREFRLPDSSQYTPGQQITVDLFAAGQLVDVVGTSIGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH+FG HG S +HR+ GS G PGRVF K+M GRMG RVTV+ L VV Sbjct: 121 AGGQKRHHFGRGPMAHG-SKNHRAPGSIGAGTTPGRVFPGKRMPGRMGNERVTVRKLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 V +R +IL++G +PG + +++ + KS KG Sbjct: 180 RVIPERNVILIQGGLPGVE-GGLLMISPA-KSVGRAKG 215 >gi|299143194|ref|ZP_07036274.1| 50S ribosomal protein L3 [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517679|gb|EFI41418.1| 50S ribosomal protein L3 [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 210 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 90/208 (43%), Positives = 133/208 (63%), Gaps = 3/208 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT +++ EG+ PVTV+ + VV +T++ +GY AVQV G K + V+KP Sbjct: 4 LIGKKIGMTQIFDEEGKVTPVTVIEAEPNVVVQKKTVEVDGYNAVQVATGFVKERRVNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 ++G F+ V KK L EFR ++ + +G F+VG+ +DVTG + GKG G + Sbjct: 64 LKGHFAKAGVECKKNLREFR-TEEVENYNIGDEIKVDLFSVGEFIDVTGTSKGKGTQGVI 122 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 +RH FG R THG S HR G G PG+VFKN +MAG+MG +VTV+NLEVV VD Sbjct: 123 RRHGFGRGRETHG-SKFHRMPGGMGAATYPGKVFKNHRMAGKMGNEQVTVQNLEVVRVDL 181 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212 ++ LILVKG +PG KK + ++++ K+ Sbjct: 182 EKNLILVKGAIPGPKKG-IVTLKETVKA 208 >gi|262280225|ref|ZP_06058009.1| 50S ribosomal protein L3 [Acinetobacter calcoaceticus RUH2202] gi|262258003|gb|EEY76737.1| 50S ribosomal protein L3 [Acinetobacter calcoaceticus RUH2202] Length = 214 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY AVQV GE + Sbjct: 3 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 62 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFRV + + + VG FTVGQ+VDVTG + GKG Sbjct: 63 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQVVDVTGQSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+ Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VS+D +R +++VKG +PG+ ++VR + K+ Sbjct: 183 VSIDAERSVLVVKGAIPGSTGGD-VIVRPTIKA 214 >gi|325981805|ref|YP_004294207.1| 50S ribosomal protein L3 [Nitrosomonas sp. AL212] gi|325531324|gb|ADZ26045.1| 50S ribosomal protein L3 [Nitrosomonas sp. AL212] Length = 215 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 88/213 (41%), Positives = 128/213 (60%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GM ++ G PVTV+ + + ++ + NGY A QV G+ K+ Sbjct: 1 MSLGLIGRKIGMMRIFTENGDAFPVTVIDVASNRITQIKKTSSNGYCAAQVSFGQKKISR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 V+KP G + V + EFRV+ D G F VGQ VD++G+TIGK Sbjct: 61 VNKPTAGHCAKAGVIAGSIIREFRVKDDSILSSFQNGMEIKSDIFKVGQKVDISGITIGK 120 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GFSGA+K HNF RA+HG S +H+ GS G QDPGR+F K+MA MG + T++NLE Sbjct: 121 GFSGAIKLHNFSSNRASHGNSKAHKKTGSIGMAQDPGRIFPGKRMAAHMGNVKRTIQNLE 180 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 ++ +D +R L+LVKG +PG+ K+ +++VR S K Sbjct: 181 ILRIDSERNLLLVKGAIPGS-KDGYVVVRSSVK 212 >gi|319893200|ref|YP_004150075.1| LSU ribosomal protein L3p (L3e) [Staphylococcus pseudintermedius HKU10-03] gi|317162896|gb|ADV06439.1| LSU ribosomal protein L3p (L3e) [Staphylococcus pseudintermedius HKU10-03] gi|323463752|gb|ADX75905.1| ribosomal protein L3 [Staphylococcus pseudintermedius ED99] Length = 219 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 92/220 (41%), Positives = 126/220 (57%), Gaps = 11/220 (5%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+Q+G Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQIGFENKEAYK 60 Query: 54 -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 G K +K G + +PK+ + EFR DD VG S F VG ++DVT Sbjct: 61 KGRKTNKYATKAAEGHAKKADAAPKRFIREFRNVNVDD-YEVGQEVSVDTFEVGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G + GKGF GA+KRHN +HG HR+ GS G D RVFK +K+ GRMGGN V Sbjct: 120 GTSKGKGFQGAIKRHNQSRGPMSHGSH-FHRAPGSIGMASDASRVFKGQKLPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 TV+NLEVV VD + +ILVKG VPG KK ++ ++ + K+ Sbjct: 179 TVQNLEVVQVDTENNVILVKGNVPGPKKG-FVQIQSAIKA 217 >gi|299768666|ref|YP_003730692.1| 50S ribosomal protein L3 [Acinetobacter sp. DR1] gi|298698754|gb|ADI89319.1| 50S ribosomal protein L3 [Acinetobacter sp. DR1] Length = 212 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY AVQV GE + Sbjct: 1 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFRV + + + VG FTVGQ+VDVTG + GKG Sbjct: 61 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQVVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+ Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VS+D +R +++VKG +PG+ ++VR + K+ Sbjct: 181 VSIDAERSVLVVKGAIPGSTGGD-VIVRPTIKA 212 >gi|322386354|ref|ZP_08059984.1| 50S ribosomal protein L3 [Streptococcus cristatus ATCC 51100] gi|321269578|gb|EFX52508.1| 50S ribosomal protein L3 [Streptococcus cristatus ATCC 51100] Length = 208 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 90/213 (42%), Positives = 130/213 (61%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVVEAAPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+V Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S + ++ + K+ Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLVTIKSAVKAG 207 >gi|328543358|ref|YP_004303467.1| 50S ribosomal protein L3 [Polymorphum gilvum SL003B-26A1] gi|326413103|gb|ADZ70166.1| 50S ribosomal protein L3 [Polymorphum gilvum SL003B-26A1] Length = 227 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 127/205 (61%), Positives = 154/205 (75%), Gaps = 2/205 (0%) Query: 11 GMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFS 70 GMT +YN G +PVTVL L+ CQVV HRT +KNGY A+Q+GAG AKVKN K MRG F+ Sbjct: 2 GMTRIYNDAGEHVPVTVLRLEKCQVVAHRTEEKNGYTALQLGAGAAKVKNTPKAMRGHFA 61 Query: 71 SVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130 V PK+ + EFRV +D +L+ VG+ + ++ GQ VDVTG +IGKGF+G MKRHNFG Sbjct: 62 VAKVEPKRTIAEFRVSQD-NLIDVGAEITADHYVAGQYVDVTGTSIGKGFAGVMKRHNFG 120 Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190 G RATHG S+SHRSHGSTG RQDPG+VFK KKMAG MG RVT +NL+VV D +RGLI+ Sbjct: 121 GGRATHGNSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDVRVTTQNLKVVRTDVERGLIM 180 Query: 191 VKGCVPGAKKNSWILVRDSFKSAVN 215 V+G VPGA K WILVRD+ K A+ Sbjct: 181 VEGSVPGA-KGGWILVRDAVKKALP 204 >gi|207723095|ref|YP_002253500.1| 50s ribosomal protein l3 [Ralstonia solanacearum IPO1609] gi|206588288|emb|CAQ18986.1| 50s ribosomal protein l3 [Ralstonia solanacearum IPO1609] Length = 209 Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats. Identities = 87/202 (43%), Positives = 120/202 (59%), Gaps = 2/202 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V+ +G IPVTVL + +V +T + +GY AVQV G + V+KP+ G + Sbjct: 1 MTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGSRRASRVTKPLAGHLAK 60 Query: 72 VNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130 V + + EFR+ L +G F+ GQ +DV G TIGKG++G +KR+NF Sbjct: 61 AGVEAGEIIAEFRIDAAKAAELKLGDTIDVDLFSAGQKIDVQGTTIGKGYAGTIKRYNFS 120 Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190 RA+HG S SH GS G QDPGRVF K+M G MG TV+NL +V VD +R L+L Sbjct: 121 SGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVIVRVDAERKLLL 180 Query: 191 VKGCVPGAKKNSWILVRDSFKS 212 VKG VPGA K+ +++V + K+ Sbjct: 181 VKGAVPGA-KSGFVVVSPAVKA 201 >gi|33564555|emb|CAE43871.1| 50S ribosomal protein L3 [Bordetella pertussis Tohama I] Length = 214 Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats. Identities = 92/212 (43%), Positives = 124/212 (58%), Gaps = 3/212 (1%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + RK+GMT ++ +G IPVTVL + N +V ++L+ +GY A+QV G + V KP Sbjct: 1 MGRKVGMTRIFTEDGESIPVTVLDVSNNRVTQVKSLESDGYAAIQVTYGTRRATRVVKPQ 60 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP--SYFTVGQLVDVTGMTIGKGFSGA 123 G ++ L EFR+ S F GQ VDVTG +IGKGF+G Sbjct: 61 AGHYAKAGAEAGSILKEFRLDPARAAEFAAGAVIAVESVFEAGQQVDVTGTSIGKGFAGT 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KRHNFG RA+HG S SHR GS G QDPGR+F K+M+G MG TV+NL+VV VD Sbjct: 121 IKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMSGHMGDVTRTVQNLDVVRVD 180 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +RGL++VKG VPG ++VR + K+ Sbjct: 181 AERGLLMVKGAVPG-HAGGDVIVRPAVKAPAK 211 >gi|254303420|ref|ZP_04970778.1| ribosomal protein L3 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323612|gb|EDK88862.1| ribosomal protein L3 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 211 Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT ++ +G+ +PVTV+ V+ +T +K+GY+A+Q+G E K KN + Sbjct: 2 SGILGKKIGMTQIF-EDGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ V P++ + E V+ D +G Q VD+TG + GKG SG Sbjct: 61 KPLMGIFNKAGVKPQRFVKELEVESVDG-YELGQEIKVDVLAEVQYVDITGTSKGKGTSG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGG RA+HGVS +HR GS G PG+V K K+MAG+ G VTV+NL+VV V Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D + L+L+KG VPGA KN ++++R + K + Sbjct: 180 DAEHNLLLIKGAVPGA-KNGYLVIRPAVKKVI 210 >gi|50086215|ref|YP_047725.1| 50S ribosomal protein L3 [Acinetobacter sp. ADP1] gi|81827372|sp|Q6F7R2|RL3_ACIAD RecName: Full=50S ribosomal protein L3 gi|49532191|emb|CAG69903.1| 50S ribosomal protein L3 [Acinetobacter sp. ADP1] Length = 212 Score = 253 bits (648), Expect = 8e-66, Method: Composition-based stats. Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY AVQV GE + Sbjct: 1 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFRV + + + +G FTVGQ+VDVTG + GKG Sbjct: 61 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+ Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VS+D +R +++VKG +PGA ++VR + K+ Sbjct: 181 VSIDAERSVLVVKGAIPGATGGD-VIVRPTIKA 212 >gi|296137306|ref|YP_003644548.1| 50S ribosomal protein L3 [Thiomonas intermedia K12] gi|295797428|gb|ADG32218.1| 50S ribosomal protein L3 [Thiomonas intermedia K12] Length = 220 Score = 253 bits (648), Expect = 8e-66, Method: Composition-based stats. Identities = 98/213 (46%), Positives = 134/213 (62%), Gaps = 2/213 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 G+V RK+GMT V+ +G I VTVL +V RT D +GY AVQV G K + Sbjct: 5 SMGLVTRKVGMTRVFTDDGASIAVTVLDASGNRVSQVRTQDVDGYSAVQVAYGSRKPSRL 64 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +K G + V P + L EF + + +G+ S F VGQ+VD G++IGKGF Sbjct: 65 TKGQAGHLAKAGVEPAEILKEFDLPAEKAADYALGATVPASLFQVGQMVDAQGVSIGKGF 124 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G++KRHNF RA+HG S++ R+ GS G QDPGRVF K+MAG+MG VTV+NLEVV Sbjct: 125 AGSIKRHNFSSNRASHGNSVTTRAPGSIGMAQDPGRVFPGKRMAGQMGNETVTVQNLEVV 184 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +D+ R LILVKG VPG+ ++ ++ +R + KSA Sbjct: 185 RIDEARQLILVKGAVPGS-RSGFVFLRPAVKSA 216 >gi|311896570|dbj|BAJ28978.1| putative ribosomal protein L3 [Kitasatospora setae KM-6054] Length = 215 Score = 253 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 95/211 (45%), Positives = 124/211 (58%), Gaps = 3/211 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVKNV 61 G++ KLGMT V++ R +PVTV+ V T D GY AVQ+G GE + V Sbjct: 6 KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVHTADSPAGYDAVQIGFGEIDPRKV 65 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP++G F+ V+P++ L E R D +G + F G VDVTG + GKGF+ Sbjct: 66 NKPLQGHFAKAGVTPRRHLVELR-TADASEYTLGQEITAELFEAGVKVDVTGTSKGKGFA 124 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V + Sbjct: 125 GVMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGHERVTTQNLTVHA 184 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++GL+L+KG +PG +LVR + K Sbjct: 185 VDAEKGLLLIKGAIPGPN-GGLVLVRTAAKG 214 >gi|225621028|ref|YP_002722286.1| 50S ribosomal protein L3 [Brachyspira hyodysenteriae WA1] gi|254803657|sp|C0QVZ6|RL3_BRAHW RecName: Full=50S ribosomal protein L3 gi|225215848|gb|ACN84582.1| 50S ribosomal protein L3 [Brachyspira hyodysenteriae WA1] Length = 217 Score = 253 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 86/219 (39%), Positives = 122/219 (55%), Gaps = 3/219 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +KLGMT V++ G I VTV+ C V+ R +K+GY A+Q+G G K K++ Sbjct: 2 VGIIGKKLGMTTVFDETGNAIAVTVVEAGPCTVMQIRDNEKDGYSAIQLGYGAVKEKHLK 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F N+ PKK L EFR+ D VG F G +DV+ ++ G+GF+G Sbjct: 62 KPQIGQFKKANLEPKKYLKEFRMD-DASSYTVGQELKADIFQAGDFIDVSSLSKGRGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHN+ G +HG S R GS GC P RV+K K M G MG T++NL+VV + Sbjct: 121 VMKRHNYDGGPMSHG-SNFRRRAGSIGCNSYPARVWKGKGMPGHMGNTLTTIQNLKVVEI 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 LI++KG +PGA NS + + + K K ++ Sbjct: 180 RPDDNLIMIKGAIPGAI-NSIVKLTSAVKKRNKKKNSMN 217 >gi|237736170|ref|ZP_04566651.1| LSU ribosomal protein L3P [Fusobacterium mortiferum ATCC 9817] gi|229421723|gb|EEO36770.1| LSU ribosomal protein L3P [Fusobacterium mortiferum ATCC 9817] Length = 208 Score = 253 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 92/210 (43%), Positives = 134/210 (63%), Gaps = 3/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++A+K+GMT ++ +G+ IPVTV+ V+ +T++ +GY A+Q+G E K KN + Sbjct: 2 SGILAKKIGMTQIF-EDGKFIPVTVVEAGPNFVLQKKTVENDGYTALQLGFDEKKEKNTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F V+P++ + E RV + +G + VD+TG + GKG SG Sbjct: 61 KPVMGIFKKAGVNPQRFVKELRVDS-VEGYELGQEIKVDVLAGVEFVDITGTSKGKGTSG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGG RA+HGVS +HR GS G PG+V K K+MAG+ G VTV+NL+VV V Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSTWPGKVLKGKRMAGQYGNETVTVQNLKVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D + L+L+KG VPG+ KNS+I+V+ + K Sbjct: 180 DAENNLLLIKGAVPGS-KNSYIVVKPAVKK 208 >gi|145256427|ref|XP_001401384.1| 54S ribosomal protein L9 [Aspergillus niger CBS 513.88] gi|134058285|emb|CAK38476.1| unnamed protein product [Aspergillus niger] Length = 305 Score = 253 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 98/215 (45%), Positives = 139/215 (64%), Gaps = 3/215 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G + K GMT +Y+ G+R+P TVL LD +VV H+T K+GY AVQ+GAG + Sbjct: 79 LRTGAITFKKGMTALYDPETGKRVPCTVLQLDRVEVVSHKTRQKHGYYAVQLGAGWRRPD 138 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 N++K + G F++ +SPK+ ++EFRV+ + LLPVG S +F GQ VD T GKG Sbjct: 139 NLTKSLLGHFTANGISPKRHVYEFRVKDESGLLPVGQTVSADWFQEGQFVDARSDTKGKG 198 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKRH FGG +HGVS++HRS GS G Q G RV+ KKMAG MG + TV+NL Sbjct: 199 FAGVMKRHGFGGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLR 258 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++ VD + G+++V G V G K + ++D+ K Sbjct: 259 ILKVDAENGIVVVNGSVSGP-KGCVVRIQDAIKKP 292 >gi|219666490|ref|YP_002456925.1| 50S ribosomal protein L3 [Desulfitobacterium hafniense DCB-2] gi|219536750|gb|ACL18489.1| ribosomal protein L3 [Desulfitobacterium hafniense DCB-2] Length = 209 Score = 253 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 93/212 (43%), Positives = 129/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ EG IPVTV+ C V+ +T +GY A+QVG G + + Sbjct: 1 MSKGILGKKVGMTQVFTEEGHLIPVTVVEAGPCYVIQKKTKATDGYNAIQVGFGALRERL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +V P + + EFRV D D +G + F G VDV G++ GKGF Sbjct: 61 ANKPQKGHVAKASVKPMRYIREFRVD-DVDAYEIGQEITAEVFAAGDAVDVVGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH G HG S HR GS G + P RVFK + + GRMGG RVTV+NL+VV Sbjct: 120 AGMIKRHGAGRGPMKHG-SKYHRRTGSLGAKG-PARVFKGRNLPGRMGGERVTVQNLKVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + +ILVKG VPGAKK S ++++ S K+ Sbjct: 178 RVDADKNMILVKGAVPGAKK-SLLILKPSVKA 208 >gi|269976879|ref|ZP_06183853.1| 50S ribosomal protein L3 [Mobiluncus mulieris 28-1] gi|306819491|ref|ZP_07453198.1| 50S ribosomal protein L3 [Mobiluncus mulieris ATCC 35239] gi|269934710|gb|EEZ91270.1| 50S ribosomal protein L3 [Mobiluncus mulieris 28-1] gi|304647783|gb|EFM45101.1| 50S ribosomal protein L3 [Mobiluncus mulieris ATCC 35239] Length = 218 Score = 253 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 89/210 (42%), Positives = 130/210 (61%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 ++ RKLGMT V++ EG+ +PVTV+ ++ V RT +++GY A+Q+G G+ + V+ Sbjct: 10 KALLGRKLGMTQVWDEEGKLVPVTVVEVEKNVVTDIRTPERDGYTALQLGFGQLDERKVT 69 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KPM G F+ V+P++ L E R D D +G F G LVDVTG T GKGF+G Sbjct: 70 KPMAGHFAKSGVTPRRHLAEVRTT-DADSYELGQELGADLFETGALVDVTGNTKGKGFAG 128 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ ++HG +HR GS G PGRVF+ MAGRMGG R T+ NL+V ++ Sbjct: 129 VMKRHGFQGVSSSHGAHRNHRKPGSIGACATPGRVFRGLNMAGRMGGERRTIMNLKVQAI 188 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +GL+++ G +PG K +++R + K Sbjct: 189 DADKGLVVIAGAIPGP-KGGIVMIRSAVKG 217 >gi|329114217|ref|ZP_08242979.1| 50S ribosomal protein L3 [Acetobacter pomorum DM001] gi|326696293|gb|EGE47972.1| 50S ribosomal protein L3 [Acetobacter pomorum DM001] Length = 238 Score = 253 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 128/219 (58%), Positives = 165/219 (75%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+KLGM+ ++ +G +PVTVLH+D+ QVV R +++GY+AVQ+G G+AKVKN Sbjct: 12 MRTGLIAKKLGMSRLFKEDGTHVPVTVLHVDDVQVVDVRNQERDGYVAVQLGMGKAKVKN 71 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP RG F+ V PK+ L EFRV DD L VG+ S S+F VGQ VDVTG++ GKGF Sbjct: 72 VTKPNRGHFARTKVEPKQALREFRV-ADDAALEVGATLSASHFVVGQKVDVTGVSKGKGF 130 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NF GL ATHGVSISHRSHGSTG RQDPG+ FKNKKMAG +G RVT NLE+ Sbjct: 131 AGAMKRWNFAGLEATHGVSISHRSHGSTGNRQDPGKTFKNKKMAGHLGDERVTTLNLEIA 190 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 +VD ++ LI+V+G VPGA KN +L+RD+ K A + Sbjct: 191 AVDPEKNLIMVRGSVPGA-KNGVVLIRDAIKKARHDDAP 228 >gi|320531960|ref|ZP_08032861.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 171 str. F0337] gi|320135827|gb|EFW27874.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 171 str. F0337] Length = 222 Score = 253 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 91/209 (43%), Positives = 129/209 (61%), Gaps = 2/209 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ KLGMT +++ G PVTV+ +D V RT++ +GY AVQ+ G+ + V+KP Sbjct: 16 LLGTKLGMTQIWDENGVLRPVTVVRVDTNVVTQVRTIETDGYEAVQLAFGDIDARKVTKP 75 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + G F+ V V P++ + E R + P G + F VGQLVDVTG + GKGF+G M Sbjct: 76 LAGHFAKVGVEPRRHVAEIRTSLASEFTP-GQELAADTFEVGQLVDVTGTSKGKGFAGVM 134 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH F G+ A+HG +HR GS G PGR+FK +MAGRMG R TV+NL++ VD Sbjct: 135 KRHGFAGVGASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGHARRTVQNLKIRGVDV 194 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +G++LV G +PG K S ++VR + K A Sbjct: 195 DKGVLLVNGAIPGP-KGSVVVVRTAVKGA 222 >gi|262370578|ref|ZP_06063903.1| 50S ribosomal protein L3 [Acinetobacter johnsonii SH046] gi|262314378|gb|EEY95420.1| 50S ribosomal protein L3 [Acinetobacter johnsonii SH046] Length = 214 Score = 253 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 95/213 (44%), Positives = 133/213 (62%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY A+Q+ GE + Sbjct: 3 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAIQITTGERRESR 62 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFR-VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFR + D + VG FTVGQ+VDVTG + GKG Sbjct: 63 VTNAQKGHFAKAGVAAGRLVQEFRATEADLEGREVGGTIGVDMFTVGQVVDVTGQSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+ Sbjct: 123 FQGGVKRWNFRTQDATHGNSLSHRVLGSTGQNQTPGRVFKGKKMAGHLGAERVTVQGLEI 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VS+D +R +++VKG +PGA + VR + K+ Sbjct: 183 VSIDAERSVLVVKGAIPGATGGD-VTVRPTIKA 214 >gi|226953871|ref|ZP_03824335.1| 50S ribosomal protein L3 [Acinetobacter sp. ATCC 27244] gi|294651634|ref|ZP_06728938.1| 50S ribosomal protein L3 [Acinetobacter haemolyticus ATCC 19194] gi|226835354|gb|EEH67737.1| 50S ribosomal protein L3 [Acinetobacter sp. ATCC 27244] gi|292822483|gb|EFF81382.1| 50S ribosomal protein L3 [Acinetobacter haemolyticus ATCC 19194] Length = 214 Score = 253 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT V+ G +PVTV+ +D ++ +TL+ +GY A+QV GE + Sbjct: 3 MAIGLVGRKCGMTRVFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAIQVTTGERRESR 62 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + + EFRV + + + VG FTVGQ+VDVTG + GKG Sbjct: 63 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGSIGVDLFTVGQIVDVTGQSKGKG 122 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+ Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VS+D +R +++VKG +PG+ ++VR + K+ Sbjct: 183 VSIDAERSVLVVKGAIPGSTGGD-VIVRPTIKA 214 >gi|119502924|ref|ZP_01625009.1| 50S ribosomal protein L3 [marine gamma proteobacterium HTCC2080] gi|119461270|gb|EAW42360.1| 50S ribosomal protein L3 [marine gamma proteobacterium HTCC2080] Length = 211 Score = 253 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 98/212 (46%), Positives = 129/212 (60%), Gaps = 1/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK GMT V+ EG +PVTV+ + +V + L+ +GY A+QV G+ K Sbjct: 1 MTIGIVGRKSGMTRVFTDEGVSVPVTVVEVLPNRVTQIKDLETDGYRAIQVTTGDRKASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKP G ++ + L+EFR+ ++ VGS + F GQ VDV G + GKGF Sbjct: 61 VSKPAAGHYAKAGTAAGDGLWEFRLDGSEETFEVGSELTVERFEQGQKVDVAGRSKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR NF ATHG S+SHR+ GS G Q PGRVFK KKMAG MG RVT + LEVV Sbjct: 121 QGAVKRWNFSMQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQGLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D +R L+L+KG VPGA ++VR + K Sbjct: 181 RIDSERNLLLIKGAVPGAP-GGHVIVRPTVKG 211 >gi|254412263|ref|ZP_05026038.1| ribosomal protein L3 [Microcoleus chthonoplastes PCC 7420] gi|196181229|gb|EDX76218.1| ribosomal protein L3 [Microcoleus chthonoplastes PCC 7420] Length = 211 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 93/211 (44%), Positives = 128/211 (60%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT V++ EGR +PVTV+ C+V +T +GY AVQ+G E K K Sbjct: 1 MSVGILGTKLGMTQVFDEEGRALPVTVVQAGPCRVTQIKTKQTDGYSAVQLGYHEVKEKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G + P + L E+R+ D+ +G V + F+ GQLVDV+G TIG+GF Sbjct: 61 VNKPEKGHLAKSEAPPLRHLREYRLDNTDE-FQLGQVINAEIFSAGQLVDVSGNTIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRHNF HG S +HR GSTG PGR F KKMAGR GG R T++ L+VV Sbjct: 120 AGYQKRHNFKRGPMAHG-SKNHRLPGSTGAGTTPGRTFPGKKMAGRYGGKRQTIRKLQVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L+++KG VPG + + + + K Sbjct: 179 RVDTERNLLIIKGAVPGKP-GALLNIAPTNK 208 >gi|303240971|ref|ZP_07327482.1| 50S ribosomal protein L3 [Acetivibrio cellulolyticus CD2] gi|302591557|gb|EFL61294.1| 50S ribosomal protein L3 [Acetivibrio cellulolyticus CD2] Length = 212 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 94/214 (43%), Positives = 132/214 (61%), Gaps = 4/214 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ K+GMT ++N G IPVTV+ C V+ +T++ +GY AV+VG +A K Sbjct: 1 MKKFILGTKIGMTQIFNEAGLAIPVTVIQAGPCTVIQKKTVETDGYGAVKVGFADANEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119 ++KP +G FS + V+PKK + EFR D D G F G+ +DVTG++ GKG Sbjct: 61 LNKPQKGQFSKLKVAPKKYIREFRAD-DFDKYEAGQEIKVADMFENGEKIDVTGISKGKG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKRH THG S+ HR GS G P RVFK KK+ G MG RVTV+NL++ Sbjct: 120 FAGVMKRHGHKTGPLTHG-SMYHRRVGSMGANTSPARVFKGKKLPGHMGVERVTVQNLDI 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V VD +R L+LVKG VPGA K ++++++ KS Sbjct: 179 VRVDAERNLLLVKGAVPGA-KGGLVIIKNTVKSG 211 >gi|306821620|ref|ZP_07455218.1| 50S ribosomal protein L3 [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550365|gb|EFM38358.1| 50S ribosomal protein L3 [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 207 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 91/209 (43%), Positives = 119/209 (56%), Gaps = 3/209 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 ++ +KLGMT ++ +GR IPVTV+ V +T + +GY AVQ GE K KNV+ Sbjct: 2 KAIMGKKLGMTQIFAEDGRLIPVTVIEAGPMVVTQIKTKENDGYEAVQCAYGEIKEKNVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F V K+ L EF+V D G + F VG VD + GKGF G Sbjct: 62 KPLKGHFKKAGVGSKRHLREFKVANIADYQLAG-EINVDVFAVGDKVDAVATSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH THG HR GS G DP RVFK KK+AG MG R T+KNLEVV V Sbjct: 121 PIKRHGQSRGPETHGSH-YHRGPGSMGMCSDPSRVFKGKKLAGHMGFERTTIKNLEVVLV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D + L+LVKG VPG KK ++++++ K Sbjct: 180 DKDKNLVLVKGSVPGPKKG-LVILKEAHK 207 >gi|163752917|ref|ZP_02160041.1| 50S ribosomal protein L3 [Kordia algicida OT-1] gi|161326649|gb|EDP97974.1| 50S ribosomal protein L3 [Kordia algicida OT-1] Length = 205 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 86/206 (41%), Positives = 125/206 (60%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G + K S Sbjct: 2 SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTNEVDGYEALQLGFDDKAEKRAS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F SPK K+ EF+ + + +G + +F G+ VDV G + GKGF G Sbjct: 62 KAANGHFKKAGTSPKYKVVEFQGFE--EEYKLGDSITVEHFEEGEFVDVAGTSKGKGFQG 119 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG +ATHG R+ GS G P RVFK +MAGRMGG +V V+NL V+ Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGEKVKVQNLRVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L++VKGCVPG KN++++V+ Sbjct: 180 VVPEKNLLVVKGCVPG-HKNAYVIVQ 204 >gi|163815975|ref|ZP_02207345.1| hypothetical protein COPEUT_02155 [Coprococcus eutactus ATCC 27759] gi|158448785|gb|EDP25780.1| hypothetical protein COPEUT_02155 [Coprococcus eutactus ATCC 27759] Length = 227 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 87/229 (37%), Positives = 124/229 (54%), Gaps = 19/229 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A+K+GMT +++ G PVTVL C V +T++ +GY A+QVG GE K + Sbjct: 1 MKKAILAKKVGMTQIFDENGVLTPVTVLQAGPCVVTQIKTVENDGYDAIQVGFGEKKERV 60 Query: 61 VSK----------------PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 +K G +PK EFR++ + +G+ F Sbjct: 61 TTKDVSGKKVIRNPHGAGKAEVGHAKKAGTTPKTFYREFRLENTAE-YELGAEIKADVFA 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G +DVT + GKG++G +KRH + HG S HR GS G PGRVFK KKM Sbjct: 120 AGDKIDVTAKSKGKGYAGGLKRHGLKSGPSGHG-SKYHRHAGSNGSATTPGRVFKGKKMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 G MG RVT++NLEVV +D + +ILVKG VPG KK S ++++D+ KS Sbjct: 179 GHMGNVRVTIQNLEVVKIDVENNVILVKGAVPGPKK-SLVMIKDTVKSG 226 >gi|119025339|ref|YP_909184.1| 50S ribosomal protein L3 [Bifidobacterium adolescentis ATCC 15703] gi|154486747|ref|ZP_02028154.1| hypothetical protein BIFADO_00572 [Bifidobacterium adolescentis L2-32] gi|166233119|sp|A1A069|RL3_BIFAA RecName: Full=50S ribosomal protein L3 gi|118764923|dbj|BAF39102.1| 50S ribosomal protein L3 [Bifidobacterium adolescentis ATCC 15703] gi|154084610|gb|EDN83655.1| hypothetical protein BIFADO_00572 [Bifidobacterium adolescentis L2-32] Length = 213 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 83/212 (39%), Positives = 122/212 (57%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+ ++ +KLGM+ V++ G +PVT++ + V ++ + +GY AVQ+G G+ V Sbjct: 4 RTALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKSEESDGYKAVQLGYGQVDPTKV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G F+ V+P++ L E R ++ P G + F G LVDVTG T GKGF+ Sbjct: 64 TKPLAGHFAKAGVTPRRHLAEVRTDNAEEFEP-GQELTAELFPEGTLVDVTGTTKGKGFA 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F R THG + R GS G P R+ K K+MAGRMG T NL +VS Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTNTALNLTIVS 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + G++ +KG +PG K S +LVR + K A Sbjct: 183 SDVENGVLAIKGAIPGP-KGSIVLVRSAVKGA 213 >gi|320199504|gb|EFW74094.1| LSU ribosomal protein L3p (L3e) [Escherichia coli EC4100B] Length = 199 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 91/201 (45%), Positives = 126/201 (62%), Gaps = 2/201 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V+KP G F+ Sbjct: 1 MTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTKPEAGHFAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G +KR NF Sbjct: 61 AGVEAGRGLWEFRLAEGEEFT-VGQSISVELFADVKKVDVTGTSKGKGFAGTVKRWNFRT 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV VD +R L+LV Sbjct: 120 QDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAERNLLLV 179 Query: 192 KGCVPGAKKNSWILVRDSFKS 212 KG VPGA S ++V+ + K+ Sbjct: 180 KGAVPGA-TGSDLIVKPAVKA 199 >gi|288917230|ref|ZP_06411599.1| ribosomal protein L3 [Frankia sp. EUN1f] gi|288351421|gb|EFC85629.1| ribosomal protein L3 [Frankia sp. EUN1f] Length = 237 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 95/212 (44%), Positives = 124/212 (58%), Gaps = 2/212 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ V +T D +GY AVQ+G GE + ++K Sbjct: 8 GLLGTKLGMTQVWDANNRVVPVTVIQAGPNVVTQVKTTDNDGYSAVQLGFGEIDPRRINK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+RG F + V+P++ L E R D G + F GQ+VDVTG + GKGF+G Sbjct: 68 PLRGHFETSGVTPRRHLVELR-TADAGNYRAGQELTGELFDAGQVVDVTGTSKGKGFAGV 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GL A HGV HRS GS G PGRVFK +MAGRMG RVTV L + +VD Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGHARVTVAGLTIHAVD 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +RG +L+KG VPG + VR + K Sbjct: 187 TERGFLLIKGAVPGPD-GGLVFVRSAAKRPAP 217 >gi|221632978|ref|YP_002522201.1| 50S ribosomal protein L3 [Thermomicrobium roseum DSM 5159] gi|254803699|sp|B9KZY7|RL3_THERP RecName: Full=50S ribosomal protein L3 gi|221155754|gb|ACM04881.1| ribosomal protein L3 [Thermomicrobium roseum DSM 5159] Length = 214 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 102/211 (48%), Positives = 129/211 (61%), Gaps = 5/211 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RKLGMT +++ EGR IPVTVL + C V +T D++GY AVQ+G G K Sbjct: 1 MIEGLLGRKLGMTQIFDDEGRAIPVTVLEVGPCVVTQVKTSDRDGYQAVQLGFGHRK--R 58 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++PM+G + SP + L E RV D VG V + F GQLVDV G G+GF Sbjct: 59 QNRPMQGHLRASGASP-RYLKEVRVD-DATRFQVGQVIDCTIFQPGQLVDVIGWRKGRGF 116 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH F G THG S HR+ GS G DPGRV K K+MAGRMG RVTV+NL V Sbjct: 117 QGGVKRHGFAGGPKTHGQSDRHRAPGSIGPTTDPGRVHKGKRMAGRMGPVRVTVQNLRVE 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L+LV+G VPG N ++VR + K Sbjct: 177 RVDPQRNLVLVRGAVPG-HPNGLVIVRYAVK 206 >gi|238928155|ref|ZP_04659915.1| ribosomal protein L3 [Selenomonas flueggei ATCC 43531] gi|238884115|gb|EEQ47753.1| ribosomal protein L3 [Selenomonas flueggei ATCC 43531] Length = 220 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 97/219 (44%), Positives = 131/219 (59%), Gaps = 5/219 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 + ++ RKLGMT ++ EGR +PVTV+ N V+ +T++ +GY AVQ+G G+ K KN Sbjct: 4 LAKAILGRKLGMTQIFTEEGRVVPVTVVESGNNFVLRSKTVESDGYNAVQIGFGDIKEKN 63 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F V + + E R+ + VG F G LVDV G + GKGF Sbjct: 64 VTKPLKGQFEKAGVKAVRFIREMRLSAPSE-YNVGDTIGVDIFAAGDLVDVVGTSKGKGF 122 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KRHNF HG S SHR GSTG GRV K KK+ GRMGG RVTV+ L Sbjct: 123 AGGIKRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLT 181 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 VV VD R LIL+KG +PG KK +++++D+ K A K Sbjct: 182 VVRVDADRNLILIKGAIPGPKKG-FVVIKDTVKPAKAAK 219 >gi|328958728|ref|YP_004376114.1| 50S ribosomal protein L3 [Carnobacterium sp. 17-4] gi|328675052|gb|AEB31098.1| 50S ribosomal protein L3 [Carnobacterium sp. 17-4] Length = 210 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 90/213 (42%), Positives = 125/213 (58%), Gaps = 4/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ G IPVTV+ V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGKKVGMTQVFTESGELIPVTVIEATPNVVLQVKTIETDGYEAVQLGYQDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G + N +PK+ + EF + VG F G +V+VTG T GKGF Sbjct: 61 SNKPAMGHVAKANATPKRFIREFD-DVELGDYEVGQEVKVDAFKAGDIVNVTGTTKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH +HG S HR GS G DP RVFK + GRMGGNRVT+KNLEVV Sbjct: 120 QGVIKRHGHSRGPMSHG-SRHHRRPGSMGPV-DPNRVFKRTLLPGRMGGNRVTIKNLEVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD ++ +IL+KG VPG+KK S I ++ +F+ A Sbjct: 178 RVDVEKNVILIKGNVPGSKK-SLIQIKSAFQKA 209 >gi|295694837|ref|YP_003588075.1| 50S ribosomal protein L3 [Bacillus tusciae DSM 2912] gi|295410439|gb|ADG04931.1| 50S ribosomal protein L3 [Bacillus tusciae DSM 2912] Length = 210 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 91/213 (42%), Positives = 130/213 (61%), Gaps = 4/213 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RKLGMT V+ +GR +PVTV+ C V+ +T++ +GY+A+Q+G + K + + Sbjct: 2 KGILGRKLGMTQVFREDGRVVPVTVIEAGPCIVLQKKTVETDGYVAIQLGFADKKGRRAN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 +P G + +PKK + E R D VG F G+LVDVTG + GKG++G Sbjct: 62 RPETGHAAKSGATPKKYIREIR-NVDIAKYEVGQELRADVFAPGELVDVTGTSKGKGYAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHN HG S HR GS G P RVFK + + GRMGG RVTV+NLEV+ Sbjct: 121 TIKRHNQARGPMAHG-SKYHRGVGSLGSIA-PNRVFKGQTLPGRMGGERVTVQNLEVIQA 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D +R L+LVKG VPG +NS+++V+ + K+AV Sbjct: 179 DPERNLLLVKGAVPGP-RNSYVIVKSAVKAAVK 210 >gi|160942901|ref|ZP_02090140.1| hypothetical protein FAEPRAM212_00377 [Faecalibacterium prausnitzii M21/2] gi|158445802|gb|EDP22805.1| hypothetical protein FAEPRAM212_00377 [Faecalibacterium prausnitzii M21/2] gi|295103925|emb|CBL01469.1| LSU ribosomal protein L3P [Faecalibacterium prausnitzii SL3/3] Length = 210 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 125/212 (58%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT +++ G+ IPVTV+ C VV +T++ +GY AVQ+G GE K Sbjct: 1 MVKGIIGKKVGMTQLFDESGKVIPVTVIEAGPCTVVQKKTVESDGYQAVQLGFGEVSAKK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F NV+PKK L EFR+ D + VG + F G VDV G++ GKG+ Sbjct: 61 VNKAAAGHFKKANVAPKKTLREFRLD-DVSAMNVGDILKADVFAAGDKVDVAGVSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR LR +HG R GS G +P RVF K++ G MG RVTV+NL VV Sbjct: 120 QGVIKRFGQHRLRESHGTGPVARHAGSMGAISNPSRVFPGKRLPGHMGCVRVTVQNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + LI VKG VPG+ K + I + +S K+ Sbjct: 180 KVDTENNLIAVKGAVPGS-KGTIITLANSVKA 210 >gi|116671521|ref|YP_832454.1| 50S ribosomal protein L3 [Arthrobacter sp. FB24] gi|171855202|sp|A0JZ84|RL3_ARTS2 RecName: Full=50S ribosomal protein L3 gi|116611630|gb|ABK04354.1| LSU ribosomal protein L3P [Arthrobacter sp. FB24] Length = 216 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 92/211 (43%), Positives = 125/211 (59%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ + IPVTV+ D+ + R D +GY+AVQ+G G+ + V+ Sbjct: 8 KGLLGTKLGMTQVWDENNKLIPVTVVQADSNVITQLRNADVDGYVAVQIGYGQIDPRKVT 67 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F V+P++ + E R D +G S F GQ +DV G T GKGF+G Sbjct: 68 KPLAGHFEKAGVTPRRHVVELR-TADAAEYELGQELSVEVFEAGQKIDVVGTTKGKGFAG 126 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G P RVFK KMAGRMG R T NL V +V Sbjct: 127 VMKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGMKMAGRMGAVRHTTLNLTVHAV 186 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++ L+L+KG VPGA + +LVR + K A Sbjct: 187 DVEKSLLLIKGAVPGA-RGQVVLVRTAVKGA 216 >gi|329901062|ref|ZP_08272688.1| LSU ribosomal protein L3p (L3e) [Oxalobacteraceae bacterium IMCC9480] gi|327549262|gb|EGF33840.1| LSU ribosomal protein L3p (L3e) [Oxalobacteraceae bacterium IMCC9480] Length = 218 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 90/212 (42%), Positives = 126/212 (59%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GM ++ +G IPVTV+ + N +V +T + +GY +VQV G+ + Sbjct: 1 MSLGLVGRKVGMMRIFTDDGDSIPVTVVDVSNNRVTQIKTPETDGYTSVQVAFGQRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQK-DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V++ G + V L EFR+ + G + + S F VGQ VDV G++IGKG Sbjct: 61 VNQATAGHHAKAGVEAGTVLKEFRIDAVKASEMKAGDIVAASLFEVGQKVDVQGISIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RATHG S SH GS G QDPGRVF K+M G MG VT +NLE+ Sbjct: 121 YAGVIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTTQNLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D R L+L+KG VPGA KN ++V + K Sbjct: 181 ARIDADRQLLLIKGAVPGA-KNGKVVVSPAVK 211 >gi|319948723|ref|ZP_08022844.1| 50S ribosomal protein L3 [Dietzia cinnamea P4] gi|319437625|gb|EFV92624.1| 50S ribosomal protein L3 [Dietzia cinnamea P4] Length = 221 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 88/216 (40%), Positives = 120/216 (55%), Gaps = 3/216 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ R +PVTV+ C V RT + +GY AVQ+ G + V+ Sbjct: 7 KGILGAKLGMTQVFDENNRVVPVTVVKAGPCVVTGIRTEENDGYNAVQIAFGAVDPRKVT 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 KP+ G F V+P++ + E R+ + +G F G VDVTG + GKGF Sbjct: 67 KPVAGQFEKAGVTPRRHIAEIRLDNAEQAAGYEIGQEIGADVFEDGAFVDVTGTSKGKGF 126 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRH F G A+HG HR GS G PGRVFK K MAGRMG RVT NL+V Sbjct: 127 AGTMKRHGFAGQGASHGTQAVHRKPGSIGGASTPGRVFKGKAMAGRMGNERVTTMNLKVH 186 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 VD + G++L+KG +PG + ++VR + K Sbjct: 187 KVDAEAGVLLIKGAIPG-RNGGLVMVRSAVKGGARA 221 >gi|172039995|ref|YP_001799709.1| 50S ribosomal protein L3 [Corynebacterium urealyticum DSM 7109] gi|226725155|sp|B1VET6|RL3_CORU7 RecName: Full=50S ribosomal protein L3 gi|171851299|emb|CAQ04275.1| 50S ribosomal protein L3 [Corynebacterium urealyticum DSM 7109] Length = 218 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 91/214 (42%), Positives = 121/214 (56%), Gaps = 2/214 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +KLGMT +++ E R +PVTV+ C V RT D +GY AVQ+ GE + V+ Sbjct: 7 KGILGKKLGMTQIFDDENRVVPVTVVEAGPCVVTQVRTKDIDGYEAVQIAFGEIDPRKVN 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P++ + E RV D VG + F VDVTG + G GF+G Sbjct: 67 KPESGHFKKAGVTPRRHVAEIRV-ADASGYEVGQDVTVEIFNEVDFVDVTGTSKGHGFAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G A HG +HR G G PGRVFK K+MAGRMG NRVT++NL+V V Sbjct: 126 GMKRHGFAGQGAAHGNQAAHRRVGGIGGAATPGRVFKGKRMAGRMGNNRVTMQNLKVAKV 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D L+L+KG VPG ++V+ + K Sbjct: 186 DTDSNLLLIKGAVPG-INGGIVVVKTAVKGGAKA 218 >gi|304438362|ref|ZP_07398303.1| 50S ribosomal protein L3 [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368728|gb|EFM22412.1| 50S ribosomal protein L3 [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 220 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 97/219 (44%), Positives = 131/219 (59%), Gaps = 5/219 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 + ++ RKLGMT ++ EGR +PVTV+ N V+ +T++ +GY AVQ+G G+ K KN Sbjct: 4 LAKAILGRKLGMTQIFTEEGRVVPVTVVESGNNFVLRSKTVESDGYNAVQIGFGDIKEKN 63 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F V + + E R+ + VG F G LVDV G + GKGF Sbjct: 64 VTKPLKGQFEKAGVKAVRFIREMRLAAPSE-YNVGDTIGVDIFAEGDLVDVVGTSKGKGF 122 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KRHNF HG S SHR GSTG GRV K KK+ GRMGG RVTV+ L Sbjct: 123 AGGIKRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLT 181 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 VV VD R LIL+KG +PG KK +++++D+ K A K Sbjct: 182 VVRVDADRNLILIKGAIPGPKKG-FVVIKDTVKPAKAAK 219 >gi|72163045|ref|YP_290702.1| 50S ribosomal protein L3 [Thermobifida fusca YX] gi|109893568|sp|Q47LJ3|RL3_THEFY RecName: Full=50S ribosomal protein L3 gi|71916777|gb|AAZ56679.1| LSU ribosomal protein L3P [Thermobifida fusca YX] Length = 216 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 96/211 (45%), Positives = 125/211 (59%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGMT V++ G+ +PVTVL V RT + +GY A+Q+G G + V+ Sbjct: 7 KGVLGEKLGMTQVFDESGKVVPVTVLKAGPAVVTRVRTPETDGYSAIQLGYGHINPRKVN 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ + N++P++ E R D VG + F G+ VDVTG T GKG++G Sbjct: 67 KPLGDYLRKHNLTPRRHYVEVRTS-DASEYTVGQEITADVFQPGEKVDVTGKTKGKGYAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGGL A+HG HRS GS G PGRVFK +MAGRMG R TV+NL V SV Sbjct: 126 VMKRHGFGGLGASHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNVRRTVQNLTVHSV 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+LVKG VPG +LVR + K Sbjct: 186 DAEKGLLLVKGAVPGPN-GGLVLVRTAVKGG 215 >gi|325299132|ref|YP_004259049.1| 50S ribosomal protein L3 [Bacteroides salanitronis DSM 18170] gi|324318685|gb|ADY36576.1| 50S ribosomal protein L3 [Bacteroides salanitronis DSM 18170] Length = 205 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 80/204 (39%), Positives = 121/204 (59%), Gaps = 4/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V ++++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQLGFQDMKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PK+ L EF+ + L +G + F VDV G + GKG+ G Sbjct: 63 PLMGHFKKAGVTPKRHLAEFK--DFSEELNLGDTITVELFNDAPYVDVIGTSKGKGYQGV 120 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG + THG R GS G P +VFK +MAG MG +RVT NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMAGHMGCDRVTTHNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 + L+L+KG VPG K S +++ Sbjct: 181 IPEHNLLLIKGSVPG-YKGSIVII 203 >gi|213693088|ref|YP_002323674.1| ribosomal protein L3 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|254803655|sp|B7GNE0|RL3_BIFLI RecName: Full=50S ribosomal protein L3 gi|213524549|gb|ACJ53296.1| ribosomal protein L3 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320459266|dbj|BAJ69887.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 213 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 83/212 (39%), Positives = 118/212 (55%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R ++ +KLGM+ V++ G +PVT++ + V +T + +GY AVQ+G G V Sbjct: 4 RKALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKTEESDGYKAVQLGYGAIDPTKV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G F+ V+P++ L E R D D G + F G VDVTG T GKGF+ Sbjct: 64 TKPLAGHFAKAGVTPRRHLVEVRTD-DVDQFEAGQELAADLFEEGAEVDVTGTTKGKGFA 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F R THG + R GS G P R+ K K+MAGRMG T +NL +VS Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTATTQNLIIVS 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + G++ +KG +PG K +LVR + K A Sbjct: 183 ADVENGILAIKGAIPGP-KGGIVLVRSAVKGA 213 >gi|154505169|ref|ZP_02041907.1| hypothetical protein RUMGNA_02682 [Ruminococcus gnavus ATCC 29149] gi|153794648|gb|EDN77068.1| hypothetical protein RUMGNA_02682 [Ruminococcus gnavus ATCC 29149] Length = 242 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 94/229 (41%), Positives = 128/229 (55%), Gaps = 20/229 (8%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV- 58 M+ ++A K+GMT ++N E G IPVTVL C V +T++ +GY AVQVG + K Sbjct: 16 MKKAILATKVGMTQIFNEETGVLIPVTVLQAGPCVVTQVKTVENDGYKAVQVGFVDKKEK 75 Query: 59 ---------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103 V+K +G F VS K+ + EFR + ++ + F Sbjct: 76 IVTKDKSGKKEIAHRNGVTKAEKGHFDKAGVSGKRYVKEFRFENAEE-YTLAQEIKADIF 134 Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 G VD T ++ GKGF GA+KRHN THG S HR GS G DP +VFK KKM Sbjct: 135 AAGDKVDATAISKGKGFQGAIKRHNQSRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKM 193 Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 G+MGG ++TV+NLEVV VD + L+LVKG VPG KK S I ++++ K+ Sbjct: 194 PGQMGGKKITVQNLEVVRVDAENNLLLVKGSVPGPKK-SLITIKETVKA 241 >gi|288801098|ref|ZP_06406554.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 299 str. F0039] gi|288332032|gb|EFC70514.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 299 str. F0039] Length = 204 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 85/205 (41%), Positives = 124/205 (60%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V++ +G+ IP TV+ C V +T++K+GY AVQ+G GEAK N +K Sbjct: 3 GLIGRKIGMTSVFSADGKNIPCTVIEAGPCVVTQVKTIEKDGYKAVQLGFGEAKESNTNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 PM G F +PKK L EF+ ++ +G + F VDV G + GKGF G Sbjct: 63 PMMGTFKKAGTTPKKHLAEFKFDEE---YNLGDTITVELFNDANFVDVVGTSKGKGFQGV 119 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG ++THG R GS G P +VFK +MAG+MGG+RVT +NL+V+ V Sbjct: 120 IKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLKVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + ++LVKG V G ++ ++ + Sbjct: 180 IPEHNILLVKGSVAGCNGSTLLIEK 204 >gi|328951236|ref|YP_004368571.1| 50S ribosomal protein L3 [Marinithermus hydrothermalis DSM 14884] gi|328451560|gb|AEB12461.1| 50S ribosomal protein L3 [Marinithermus hydrothermalis DSM 14884] Length = 206 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 98/211 (46%), Positives = 128/211 (60%), Gaps = 7/211 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ K+GMT ++ + R IPVTV+ C VV RT++K+GY AVQ+G K + V+ Sbjct: 2 KGILGAKIGMTQIW-KDDRAIPVTVILAGPCPVVQRRTVEKDGYEAVQLGFLPQKPQRVN 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KPM+G F V P + L E R P G V + S F G+ VDVTG++ G+GF+G Sbjct: 61 KPMKGHFEKAGVEPVRYLREIRGFN-----PEGDVVTVSIFQPGERVDVTGISKGRGFTG 115 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKR F G +HG HR GS G R+ PGRV+K KKMAGR G RVTV+NLEVV V Sbjct: 116 VMKRWGFAGGPDSHGAHRIHRHPGSIGQRKTPGRVYKGKKMAGRYGAERVTVQNLEVVDV 175 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + LILVKG VPG +++R+S K A Sbjct: 176 IAEENLILVKGAVPGPN-GGLVILRESVKGA 205 >gi|134096321|ref|YP_001101396.1| 50S ribosomal protein L3 [Herminiimonas arsenicoxydans] gi|212288400|sp|A4G9T8|RL3_HERAR RecName: Full=50S ribosomal protein L3 gi|133740224|emb|CAL63275.1| 50S ribosomal subunit protein L3 [Herminiimonas arsenicoxydans] Length = 224 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 96/213 (45%), Positives = 125/213 (58%), Gaps = 2/213 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G IPVTVL + N +V +T D +GY AVQV G + V+K Sbjct: 10 GLLGRKVGMMRIFTDDGDSIPVTVLDVSNNRVTQIKTPDVDGYSAVQVAFGSRRASRVNK 69 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQK-DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 G + V L EFRV L VG V + S F VGQ VDV G+TIGKG++G Sbjct: 70 ASAGHHAKAGVEAGTVLKEFRVAATAASELKVGDVIAASLFEVGQKVDVQGVTIGKGYAG 129 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH+F RATHG S SH GS G QDPGRVF K+M G +G T++NLE+ + Sbjct: 130 TIKRHHFASGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVARTMQNLEIARI 189 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D R L+LVKG VPGA KN ++V + K Sbjct: 190 DADRQLLLVKGAVPGA-KNGQVIVSPAVKVKAK 221 >gi|291613236|ref|YP_003523393.1| 50S ribosomal protein L3 [Sideroxydans lithotrophicus ES-1] gi|291583348|gb|ADE11006.1| 50S ribosomal protein L3 [Sideroxydans lithotrophicus ES-1] Length = 214 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 92/215 (42%), Positives = 125/215 (58%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G +PVTVL + N +V +T +GY AVQV G + Sbjct: 1 MSLGLVGRKIGMTRIFTDDGTSLPVTVLDVSNNRVTQIKTAATDGYSAVQVAYGTRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V L EF + L +G F VGQ VDVTG+TIGKG Sbjct: 61 VTKAAAGHFAKAGVEAGSVLKEFTATPEQLSSLTLGGKVGVDMFQVGQKVDVTGVTIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR++F RATHG S SH GS G QDPGRVF K+M G +G + TV+NL++ Sbjct: 121 YAGTIKRYHFKSGRATHGNSKSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVQRTVQNLKI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 V +D R L+LV G VPGA ++VR + K+ Sbjct: 181 VRIDADRQLLLVMGAVPGAPGGD-VIVRPAVKAGA 214 >gi|225020386|ref|ZP_03709578.1| hypothetical protein CORMATOL_00393 [Corynebacterium matruchotii ATCC 33806] gi|305680123|ref|ZP_07402933.1| 50S ribosomal protein L3 [Corynebacterium matruchotii ATCC 14266] gi|224946775|gb|EEG27984.1| hypothetical protein CORMATOL_00393 [Corynebacterium matruchotii ATCC 33806] gi|305660743|gb|EFM50240.1| 50S ribosomal protein L3 [Corynebacterium matruchotii ATCC 14266] Length = 218 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 83/214 (38%), Positives = 121/214 (56%), Gaps = 2/214 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +KLGMT +++ +PVTV+ C + RT + +GY A+Q+ G+ + V Sbjct: 7 KGLLGKKLGMTQIFDENNHVVPVTVVEAGPCVITQIRTQETDGYTAIQIAYGDIDPRKVK 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V+P++ + E R+ D +G + + F VDVTG+T GKGF+G Sbjct: 67 KPQAGHFNKAGVTPRRHVAEIRMD-DVSGYELGQEITANIFDGITFVDVTGITKGKGFAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G A HG SHR G G PGRVFK K+MAGRMG +RVT +NL++ + Sbjct: 126 GMKRHGFAGQGAGHGNQASHRRVGGIGACATPGRVFKGKRMAGRMGQDRVTTQNLKIQKI 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D LIL+KG +PG + + V+ + K Sbjct: 186 DADANLILIKGAIPG-NRGGIVTVKTAVKGGNRA 218 >gi|56961932|ref|YP_173654.1| 50S ribosomal protein L3 [Bacillus clausii KSM-K16] gi|81822272|sp|Q5WLR2|RL3_BACSK RecName: Full=50S ribosomal protein L3 gi|56908166|dbj|BAD62693.1| 50S ribosomal protein L3 [Bacillus clausii KSM-K16] Length = 206 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 92/212 (43%), Positives = 132/212 (62%), Gaps = 6/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ + V+ +T++ +GY A+Q+G +AK Sbjct: 1 MTKGILGRKIGMTQVFAENGEVIPVTVIEAEPNIVLQKKTVESDGYEAIQIGFADAKKP- 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G + +PK+ + E R D+ + VG + + F G LVDVTG + GKGF Sbjct: 60 -NKPATGHAAKAETAPKRFIKEIRGVNLDE-VEVGQAINVTTFAAGDLVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRHN +HG S HR GS G P RVFK K + GRMGG ++T++NLE+V Sbjct: 118 QGAIKRHNQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKALPGRMGGEQITMQNLEIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD++R L+LVKG VPGAKK S++ V+ + K+ Sbjct: 176 RVDEERNLLLVKGNVPGAKK-SYVTVQSAVKA 206 >gi|237742672|ref|ZP_04573153.1| LSU ribosomal protein L3P [Fusobacterium sp. 4_1_13] gi|256846067|ref|ZP_05551525.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_36A2] gi|294784802|ref|ZP_06750090.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_27] gi|229430320|gb|EEO40532.1| LSU ribosomal protein L3P [Fusobacterium sp. 4_1_13] gi|256719626|gb|EEU33181.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_36A2] gi|294486516|gb|EFG33878.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_27] Length = 211 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 90/212 (42%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT ++ +G+ +PVTV+ V+ +T +K+GY+A+Q+G E K KN + Sbjct: 2 SGILGKKIGMTQIF-EDGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ V P++ + E V+ D +G + VD+TG + GKG SG Sbjct: 61 KPLMGIFNKAGVKPQRFVKELAVESVDG-YELGQEIKVDVLAEVEYVDITGTSKGKGTSG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGG RA+HGVS +HR GS G PG+V K K+MAG+ G VTV+NL+VV V Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D + L+L+KG VPGA KN ++++R + K + Sbjct: 180 DAEHNLLLIKGAVPGA-KNGYLVIRPAVKKVI 210 >gi|313673467|ref|YP_004051578.1| LSU ribosomal protein l3p [Calditerrivibrio nitroreducens DSM 19672] gi|312940223|gb|ADR19415.1| LSU ribosomal protein L3P [Calditerrivibrio nitroreducens DSM 19672] Length = 212 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 94/213 (44%), Positives = 129/213 (60%), Gaps = 4/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEA-KVK 59 M ++ RK+GMT ++ EG IPVTV+ CQVV +T +K+GY A+Q+G + K Sbjct: 1 MLKALIGRKIGMTQIFTSEGNVIPVTVVQAGPCQVVQKKTTEKDGYNALQLGFDKILKEN 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KPM G F V K L EF+V+ D+ VG + S F G +VDV G++IGKG Sbjct: 61 KINKPMGGHFKKHGVDAHKTLKEFKVENPDE-YQVGQEINVSVFAEGDIVDVQGVSIGKG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KRH F G A HG S HR+ GS G R+ PG K KK+ GRMGG VTV+ LEV Sbjct: 120 FQGVIKRHGFAGGPAAHG-SDFHRAPGSIGMREWPGETLKGKKLPGRMGGKTVTVQKLEV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V V + L+L+KG +PG NS + ++++ K Sbjct: 179 VKVLPDKNLLLIKGAIPG-HDNSIVFIKETTKK 210 >gi|300870647|ref|YP_003785518.1| 50S ribosomal protein L3 [Brachyspira pilosicoli 95/1000] gi|42559690|sp|Q9FA04|RL3_BRAPL RecName: Full=50S ribosomal protein L3 gi|11036693|gb|AAG27264.1| putative L3 ribosomal protein [Brachyspira pilosicoli] gi|300688346|gb|ADK31017.1| 50S ribosomal protein L3 [Brachyspira pilosicoli 95/1000] Length = 218 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 84/207 (40%), Positives = 118/207 (57%), Gaps = 3/207 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RKLGMT V++ G I VTV+ C V+ R +K+GY A+Q+G G K K++ Sbjct: 2 VGIIGRKLGMTTVFDETGNAIAVTVVEAGPCTVMQVRDNEKDGYNAIQLGYGAVKEKHLK 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F N+ PKK L EFR+ D VG F G +DV+ ++ G+GF+G Sbjct: 62 KPQIGQFKKANLEPKKYLKEFRLD-DSSAYTVGQELKVDIFQAGDFIDVSSLSKGRGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHN+ G +HG S R GS GC P RV+K K M G MG T++NL+VV + Sbjct: 121 VMKRHNYDGGPMSHG-SNFRRRAGSIGCNSYPARVWKGKGMPGHMGNTLTTIQNLKVVEI 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDS 209 + LI++KG +PGA N + + + Sbjct: 180 RPEDNLIMIKGSIPGAI-NGIVKITQA 205 >gi|326334545|ref|ZP_08200756.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325693314|gb|EGD35242.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 205 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 84/205 (40%), Positives = 128/205 (62%), Gaps = 4/205 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP T++ C V RT + +GY A+Q+G + K K+ + Sbjct: 2 SGLIGKKVGMTSIFDENGKNIPCTIIEAGPCVVTQVRTKEVDGYEALQLGFDDKKEKHTN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F+ +SPKKKL EF+ + +G + +F G+ VDVTG + GKGF G Sbjct: 62 KAAAGHFAKAGISPKKKLIEFQGFE--STYKLGDTITAEFFVEGEFVDVTGTSKGKGFQG 119 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 ++RH FGG ++THG R+ GS G P RVFK +MAGRMG +VTV+NL V+ Sbjct: 120 VVRRHGFGGVGQSTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLRVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 V ++ L+++KGCVPG KN+++ + Sbjct: 180 VIPEKNLLILKGCVPG-HKNAYVTI 203 >gi|229815775|ref|ZP_04446100.1| hypothetical protein COLINT_02824 [Collinsella intestinalis DSM 13280] gi|229808691|gb|EEP44468.1| hypothetical protein COLINT_02824 [Collinsella intestinalis DSM 13280] Length = 206 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 90/209 (43%), Positives = 121/209 (57%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M + ++ RK+GMT V++ + +PVTV+ C V +T +GY AVQ+G G+ K K+ Sbjct: 1 MINMILGRKIGMTQVWDEDDNVVPVTVIQAGPCTVSQVKTEATDGYNAVQIGFGDIKSKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM G F+ V P + L E RV+ ++ VG V + + F VDV G + GKGF Sbjct: 61 VNKPMAGHFAKAGVEPVRYLREVRVENGEEH-KVGDVVTVADFENVAKVDVIGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR N THG I R GS G P RV K KMAG MG RVTVKNL VV Sbjct: 120 QGRIKRWNQRRGPMTHGSHI-QRHPGSIGQCAYPARVLKGVKMAGHMGNARVTVKNLSVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +D ++ L+LVKG VPG KN + +R + Sbjct: 179 RIDAEQNLMLVKGAVPGG-KNGLVAIRMA 206 >gi|146329256|ref|YP_001210151.1| 50S ribosomal protein L3 [Dichelobacter nodosus VCS1703A] gi|166233139|sp|A5EX82|RL3_DICNV RecName: Full=50S ribosomal protein L3 gi|146232726|gb|ABQ13704.1| 50S ribosomal protein L3 [Dichelobacter nodosus VCS1703A] Length = 212 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V +K+GMT +++ EG VTV+ + + +T + +GY AVQV G K Sbjct: 1 MTMGLVGQKVGMTRIFDEEGTASAVTVIEIQPNIISQIKTDETDGYHAVQVSVGHRKSSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +K + G F+ N+S + EFRV ++ VG + F GQ VDV +IGKG Sbjct: 61 TTKALAGHFAKANISAAALVKEFRVDSEEIAKYEVGKPVELAIFEQGQRVDVRARSIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KRHNF G R THG S+SHR GS G Q PGRVFK KKM+G MG +V+N+E+ Sbjct: 121 YAGTIKRHNFRGQRKTHGNSVSHRVPGSIGQNQTPGRVFKGKKMSGHMGNKMCSVQNIEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D +R L+L+KG VPGA K ++++R S K+ Sbjct: 181 ARIDVERNLLLLKGSVPGA-KGGYVVIRPSVKA 212 >gi|331214855|ref|XP_003320108.1| 50S ribosomal protein L3 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309299098|gb|EFP75689.1| 50S ribosomal protein L3 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 367 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 95/212 (44%), Positives = 134/212 (63%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN- 60 R+GV+ARK GMT ++ +G RIPVTVL L++ QVV H+ +++ Y A+Q+G + +N Sbjct: 96 RTGVLARKRGMTSFWDSDGIRIPVTVLELEDVQVVGHKYKERDNYDAIQIGCTDKFSRNS 155 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + ++ ++++PK+K+ EF V P+G+ S ++F GQ VDV + GKGF Sbjct: 156 IHNAQLKYYKHLDLTPKQKVTEFVVSNHQCFSPIGTSISAAHFVPGQFVDVKSNSKGKGF 215 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR F G A+HG + HR GSTG QDPGRV+ KKMAGRMG VTV+NL V Sbjct: 216 AGVMKRWGFSGGNASHGSTKHHRKAGSTGQHQDPGRVWPGKKMAGRMGNQPVTVRNLLVA 275 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D LI VKG VPG KK +++ V D+ K Sbjct: 276 RIDTDMNLIYVKGQVPGPKK-AFVRVTDAEKG 306 >gi|148655337|ref|YP_001275542.1| 50S ribosomal protein L3 [Roseiflexus sp. RS-1] gi|166234588|sp|A5USI9|RL3_ROSS1 RecName: Full=50S ribosomal protein L3 gi|148567447|gb|ABQ89592.1| LSU ribosomal protein L3P [Roseiflexus sp. RS-1] Length = 210 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 96/213 (45%), Positives = 130/213 (61%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V++ G+ IPVT++ + C V RT +++GY AVQ+G E K K+ Sbjct: 1 MIEGLLGRKIGMTQVFDATGQVIPVTIIEVGPCVVTQIRTKERDGYEAVQIGYQEVKAKS 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P +G + L EFR D VG V + FT GQ VDV G + G+GF Sbjct: 61 LTRPEQGHLRGAG-KLLRHLREFRADNIADH-KVGDVLTVEMFTPGQRVDVIGTSKGRGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH FGG THG S R+ GS G DPG V KN +MAGRMG RVTV+NL VV Sbjct: 119 QGVVKRHGFGGGPRTHGQSDRLRAPGSIGAGTDPGHVLKNTRMAGRMGNQRVTVQNLTVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V +R L+LV+G +PGA KN ++VR + K + Sbjct: 179 DVVPERNLLLVRGSIPGA-KNGLVMVRRAIKGS 210 >gi|160894756|ref|ZP_02075531.1| hypothetical protein CLOL250_02307 [Clostridium sp. L2-50] gi|156863690|gb|EDO57121.1| hypothetical protein CLOL250_02307 [Clostridium sp. L2-50] Length = 227 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 89/227 (39%), Positives = 123/227 (54%), Gaps = 19/227 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT +++ G +PVTVL C V +T++ +GY A+QVG GE K + Sbjct: 1 MKKAILATKVGMTQIFDENGVLVPVTVLQAGPCVVTQVKTVENDGYDAIQVGFGEKKERI 60 Query: 61 VS----------------KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 + K G N +PK EFR+ D +G+ F Sbjct: 61 TTKDVSGKKVIRNPHGAGKAEVGHAKKANTTPKTFYREFRLD-DCAQYELGAEIKADVFA 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G +DVT T GKG++G +KRH + HG S HR GS G PGRVFK KKM Sbjct: 120 EGDKIDVTAKTKGKGYAGGLKRHGLKSGPSGHG-SKYHRHAGSNGSATTPGRVFKGKKMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 G MG RVT++NLEVV +D + +ILVKG VPG KK S ++++D+ K Sbjct: 179 GHMGSVRVTIQNLEVVKIDVENDVILVKGAVPGPKK-SLVMIKDTVK 224 >gi|269140570|ref|YP_003297271.1| 50S ribosomal protein L3 [Edwardsiella tarda EIB202] gi|267986231|gb|ACY86060.1| 50S ribosomal protein L3 [Edwardsiella tarda EIB202] gi|304560359|gb|ADM43023.1| LSU ribosomal protein L3p (L3e) [Edwardsiella tarda FL6-60] Length = 199 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 90/201 (44%), Positives = 126/201 (62%), Gaps = 2/201 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++ +G IPVTV+ ++ +V + LD +GY A+QV G K V+KP G F+ Sbjct: 1 MTRIFTEDGVSIPVTVIEIEANRVTQVKDLDNDGYRAIQVTTGSKKANRVTKPEAGHFAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 V + L EFR+ + ++ +G S F + VDVTG++ GKGF+G +KR NF Sbjct: 61 AGVEAGRVLREFRLSEGEEFT-IGQNISVEIFADVKKVDVTGISKGKGFAGTVKRWNFRT 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 ATHG S+SHR+ GS G Q PG+VFK KKMAG++G RVTV++L+VV VD +R L+LV Sbjct: 120 QDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVDAERNLLLV 179 Query: 192 KGCVPGAKKNSWILVRDSFKS 212 KG VPGA I V+ + K+ Sbjct: 180 KGAVPGATGGDLI-VKPAVKA 199 >gi|257440269|ref|ZP_05616024.1| 50S ribosomal protein L3 [Faecalibacterium prausnitzii A2-165] gi|257197303|gb|EEU95587.1| 50S ribosomal protein L3 [Faecalibacterium prausnitzii A2-165] Length = 210 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 126/212 (59%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT +++ G+ IPVTV+ C VV +T++ +GY AVQ+G GE K Sbjct: 1 MVKGIIGKKVGMTQLFDESGKVIPVTVIEAGPCTVVQKKTVESDGYQAVQLGFGEVSAKK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F NV+PKK L EFR+ +D + VG V F G VDV G++ GKG+ Sbjct: 61 VNKAAAGHFKKANVAPKKTLREFRL-EDVSAMNVGDVLKADVFAAGDKVDVAGVSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR LR +HG R GS G +P RVF K++ G MG RVTV+NL VV Sbjct: 120 QGVIKRFGQHRLRESHGTGPVARHAGSMGAISNPSRVFPGKRLPGHMGFVRVTVQNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + LI VKG VPG+ K + + + +S K+ Sbjct: 180 KVDTENNLIAVKGAVPGS-KGTIVTLANSVKA 210 >gi|67528204|ref|XP_661912.1| hypothetical protein AN4308.2 [Aspergillus nidulans FGSC A4] gi|40741279|gb|EAA60469.1| hypothetical protein AN4308.2 [Aspergillus nidulans FGSC A4] gi|259482889|tpe|CBF77796.1| TPA: 50S ribosomal protein L3 (AFU_orthologue; AFUA_4G06000) [Aspergillus nidulans FGSC A4] Length = 296 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 104/214 (48%), Positives = 140/214 (65%), Gaps = 3/214 (1%) Query: 2 RSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R+G +A K GMT +++ G+RI TVL LD QV+ H+T+D +GY AVQ+GAG N Sbjct: 72 RTGAIAIKKGMTAIFDPETGKRISCTVLQLDRVQVIAHKTVDVHGYYAVQMGAGWKHPNN 131 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K + G FS VSPK+ ++EFRV+ +D LLPVG + + +F GQ VD T GKGF Sbjct: 132 VTKSLLGHFSEQGVSPKRHVYEFRVKDEDGLLPVGQLVNADWFHEGQYVDARSNTKGKGF 191 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179 +G MKRH FGG +HGVS++HRS GS G Q G RV+ KKMAG MG + TV+NL+V Sbjct: 192 AGVMKRHGFGGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLKV 251 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + VD + GL+LV G V G K + ++D+ K Sbjct: 252 LKVDAENGLVLVNGSVSGP-KGCVVRIQDAIKKP 284 >gi|156312295|ref|XP_001617804.1| hypothetical protein NEMVEDRAFT_v1g225779 [Nematostella vectensis] gi|156195878|gb|EDO25704.1| predicted protein [Nematostella vectensis] Length = 205 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 83/206 (40%), Positives = 127/206 (61%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ RK+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G + K K+ + Sbjct: 2 SGLIGRKIGMTSLFDENGKNIPCTVIEAGPCVVTQVRTEEVDGYNALQLGFDDKKAKSSN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K + G F + K+K+ EF+ + + +G + +F G+ VDV+G++ GKGF G Sbjct: 62 KALDGHFKKAGATAKRKVVEFQGFE--EEYKLGDSITVEHFEEGEFVDVSGISKGKGFQG 119 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG +ATHG R+ GS G P RVFK +MAGRMGG +V V+NL V+ Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGEKVKVQNLRVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V + L++VKG +PG KNS++ ++ Sbjct: 180 VVADKNLLVVKGAIPG-HKNSYVTIQ 204 >gi|240145878|ref|ZP_04744479.1| 50S ribosomal protein L3 [Roseburia intestinalis L1-82] gi|257202027|gb|EEV00312.1| 50S ribosomal protein L3 [Roseburia intestinalis L1-82] gi|291535430|emb|CBL08542.1| LSU ribosomal protein L3P [Roseburia intestinalis M50/1] gi|291537926|emb|CBL11037.1| LSU ribosomal protein L3P [Roseburia intestinalis XB6B4] Length = 227 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 86/229 (37%), Positives = 121/229 (52%), Gaps = 19/229 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58 M+ ++A K+GMT ++N +G +PVTVL C V +T++ +GY AVQV + K Sbjct: 1 MKKAILATKVGMTQIFNADGVLVPVTVLEAGPCSVTQIKTVENDGYSAVQVAYADKKEKV 60 Query: 59 --------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V+K G F+ VS K+ + EF+ + D+ +G V F Sbjct: 61 VSKDANGKKEIRNRHGVNKAQMGHFAKAGVSGKRYVREFKFENADE-YKLGDVIKADIFA 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G +D T ++ GKGF GA+KR HG S HR GS G P RVFK K M Sbjct: 120 EGDKIDATAISKGKGFQGAIKRLGQHRGPMAHG-SKFHRHQGSNGACSSPSRVFKGKGMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 G MG +VT +NLEVV VD + L+LVKG VPGAKK + ++++ K+ Sbjct: 179 GHMGSVKVTTQNLEVVRVDAENNLLLVKGAVPGAKK-CMVTIKETVKAG 226 >gi|157151310|ref|YP_001451235.1| 50S ribosomal protein L3 [Streptococcus gordonii str. Challis substr. CH1] gi|262283583|ref|ZP_06061348.1| ribosomal protein L3 [Streptococcus sp. 2_1_36FAA] gi|189029485|sp|A8AZM5|RL3_STRGC RecName: Full=50S ribosomal protein L3 gi|157076104|gb|ABV10787.1| ribosomal protein L3 [Streptococcus gordonii str. Challis substr. CH1] gi|262260640|gb|EEY79341.1| ribosomal protein L3 [Streptococcus sp. 2_1_36FAA] Length = 208 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFAAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+ Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIA 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+ Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAG 207 >gi|282857362|ref|ZP_06266599.1| 50S ribosomal protein L3 [Pyramidobacter piscolens W5455] gi|282584862|gb|EFB90193.1| 50S ribosomal protein L3 [Pyramidobacter piscolens W5455] Length = 208 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 96/206 (46%), Positives = 133/206 (64%), Gaps = 2/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT V+N G+ +PVTV+ C VV RT +KNGY A+ +G GE K + Sbjct: 1 MSLGILGQKLGMTRVFNEAGQSVPVTVIAAGPCPVVDVRTPEKNGYSAILLGLGERKPRK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G + V P + L EFR++ + G + + F G+ V VTG + GKGF Sbjct: 61 VTKPLQGMYDRCGVRPCRWLREFRIENSAE-YKAGQIVDVAVFAEGETVSVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGL+A+HGVS+SHR S+G P +FK K M G +G RVT+KNL VV Sbjct: 120 AGVMKRWNFGGLQASHGVSVSHRKPASSGASSYPSHIFKGKAMPGHLGNERVTIKNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 +VD + L+L+KG VPGA KN +L+ Sbjct: 180 AVDKENNLLLIKGAVPGA-KNGLVLI 204 >gi|227487123|ref|ZP_03917439.1| 50S ribosomal protein L3 [Corynebacterium glucuronolyticum ATCC 51867] gi|227541710|ref|ZP_03971759.1| 50S ribosomal protein L3 [Corynebacterium glucuronolyticum ATCC 51866] gi|227092781|gb|EEI28093.1| 50S ribosomal protein L3 [Corynebacterium glucuronolyticum ATCC 51867] gi|227182525|gb|EEI63497.1| 50S ribosomal protein L3 [Corynebacterium glucuronolyticum ATCC 51866] Length = 216 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 119/212 (56%), Gaps = 2/212 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ + R +PVTV+ C V RT++ +GY A+Q+ GE + Sbjct: 7 KGILGTKLGMTQVFDEDNRVVPVTVVEAGPCVVTQIRTVETDGYNAIQIAYGEIDPRKAK 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G +P++ + E R+ D +G + F LVDVTG T GKG++G Sbjct: 67 KPQVGHAKKAGATPRRHVAEIRMD-DVSGYELGQDVTVDIFEGVNLVDVTGTTKGKGYAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRH F G A HG +HR G G PGRVFK +MAGRMG +RVT +NL+V + Sbjct: 126 AMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGQDRVTTQNLKVQRI 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D + LIL+KG +PG + + V+ + K Sbjct: 186 DAEANLILIKGAIPG-NRGGLVTVKTAVKGGA 216 >gi|300782608|ref|YP_003762899.1| 50S ribosomal protein L3 [Amycolatopsis mediterranei U32] gi|299792122|gb|ADJ42497.1| large subunit ribosomal protein L3 [Amycolatopsis mediterranei U32] Length = 218 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 92/211 (43%), Positives = 120/211 (56%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ + R +PVTV+ V RT DK+GY AVQ+ G + V+ Sbjct: 7 KGILGTKLGMTQVFDEQNRVVPVTVVKAGPNVVTQVRTQDKDGYTAVQLAFGAVDPRKVN 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P++ L E R D + VG + F G VDVTG + GKG++G Sbjct: 67 KPRTGHFDKAGVTPRRFLAELRTT-DAETYEVGQEITAEVFAAGVEVDVTGTSKGKGYAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G A+HG HR GS G PGRVFK +MAGRMG +RVT +NL V +V Sbjct: 126 VMKRHGFKGQGASHGAQAVHRKPGSIGGCATPGRVFKGLRMAGRMGNDRVTTQNLTVHAV 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 GL+L+KG VPG K + VR + K Sbjct: 186 RADDGLLLIKGAVPGP-KGGVLFVRSAAKGG 215 >gi|328851231|gb|EGG00388.1| hypothetical protein MELLADRAFT_73188 [Melampsora larici-populina 98AG31] Length = 336 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 94/212 (44%), Positives = 132/212 (62%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK-VKN 60 R+GV+ARK GMT ++ +G R+PVTVL L++ QV+ H+ ++ Y AVQVG N Sbjct: 65 RTGVIARKRGMTSFWDADGVRVPVTVLELEDVQVIGHKYHARDSYCAVQVGCSNRNTRNN 124 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++ R +F V+PK ++ EF+V + L+PVG+ S ++F GQ VDV + GKGF Sbjct: 125 LNSSQRKWFEHAGVNPKHRVAEFQVTDETSLVPVGTEISSAHFVPGQFVDVKANSKGKGF 184 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR F G A+HG + HR GSTG QDPGRV+ KKMAGRMG +TV+NL V Sbjct: 185 AGVMKRWGFSGGNASHGSTKHHRKAGSTGQHQDPGRVWPGKKMAGRMGNQPITVRNLLVA 244 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D ++ VKG VPG K ++ + D+ K Sbjct: 245 RIDTALNVVYVKGQVPGPTKG-YVKISDAEKG 275 >gi|323490623|ref|ZP_08095828.1| 50S ribosomal protein L3 [Planococcus donghaensis MPA1U2] gi|323395715|gb|EGA88556.1| 50S ribosomal protein L3 [Planococcus donghaensis MPA1U2] Length = 209 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 87/212 (41%), Positives = 124/212 (58%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEASPNVVLQKKTVEVDGYEAIQLGFEDKRDKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + E R D +G F G +VDVTG T GKGF Sbjct: 61 SNKPSKGHVAKANTAPKRFIRELRNVNLAD-YEIGQEVKVDVFAEGDVVDVTGTTKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH THG S HR GS G P RVFK KK+ G+MGG +T++NL +V Sbjct: 120 QGVIKRHGQSRGPMTHG-SRYHRRPGSMGPVA-PNRVFKQKKLPGQMGGTTITIQNLSIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPG++K + I V+ + K+ Sbjct: 178 KVDLERNLLLVKGNVPGSRK-ALIRVKSATKA 208 >gi|183601944|ref|ZP_02963313.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis HN019] gi|219682857|ref|YP_002469240.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis AD011] gi|241190433|ref|YP_002967827.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195839|ref|YP_002969394.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218829|gb|EDT89471.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis HN019] gi|219620507|gb|ACL28664.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis AD011] gi|240248825|gb|ACS45765.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250393|gb|ACS47332.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289178157|gb|ADC85403.1| LSU ribosomal protein L3P [Bifidobacterium animalis subsp. lactis BB-12] gi|295793420|gb|ADG32955.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis V9] Length = 216 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 85/212 (40%), Positives = 123/212 (58%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+ ++ +KLGM+ V++ G +PVT++ + V + + +GY AVQ+G G+ + V Sbjct: 7 RNALLGKKLGMSQVWDENGFFVPVTLVEVSTNVVTAVKNEETDGYKAVQLGYGQVDPRKV 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KPM G F+ V+P++ L E R + +D P G + F G VDVTG T GKGF+ Sbjct: 67 TKPMAGHFAKAGVTPRRHLAEVRTENVEDFEP-GQELTAEVFPEGVQVDVTGTTKGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F R THG + R GS G P R+ K K+MAGRMG TV+NL VVS Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTNTVQNLTVVS 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + G++ +KG +PG K +LVR + K A Sbjct: 186 SDVENGILAIKGAIPGP-KGGIVLVRSAVKGA 216 >gi|258568440|ref|XP_002584964.1| 60S ribosomal protein L9 [Uncinocarpus reesii 1704] gi|237906410|gb|EEP80811.1| 60S ribosomal protein L9 [Uncinocarpus reesii 1704] Length = 301 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 98/216 (45%), Positives = 141/216 (65%), Gaps = 3/216 (1%) Query: 2 RSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R+G +A K GM+ +++ G+R P T+L LD QV+ H+T +K+GY AVQVG G N Sbjct: 73 RTGAIAIKKGMSAIFDPETGKRTPCTILQLDRVQVISHKTREKHGYFAVQVGFGWKNPSN 132 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++PM G F++ VSPK+ + EFRV+ + LLP+G + + +F GQ VDV + G GF Sbjct: 133 VTRPMLGHFAANEVSPKRYVHEFRVRDEVGLLPIGQMINADWFQEGQFVDVRSHSRGMGF 192 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179 +G MKR FGG +HGVS++HRS GSTG Q G RV+ KKM G MG +VT +NL+V Sbjct: 193 TGVMKRWGFGGQDRSHGVSLTHRSLGSTGPSQGGGSRVYPGKKMPGNMGNEQVTTQNLKV 252 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 + VD ++GL++VKG V G K + ++D+ K + Sbjct: 253 LKVDPEKGLVVVKGSVSGPKGRC-VKIQDAIKKPLQ 287 >gi|256390140|ref|YP_003111704.1| 50S ribosomal protein L3 [Catenulispora acidiphila DSM 44928] gi|256356366|gb|ACU69863.1| ribosomal protein L3 [Catenulispora acidiphila DSM 44928] Length = 215 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 98/212 (46%), Positives = 125/212 (58%), Gaps = 2/212 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGMT V++ R +PVTV+ C V R + +GY AVQ+ G K V+ Sbjct: 6 KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQIRKQEIDGYEAVQIAYGAVKPTKVT 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V+P++ E R D +G + FT GQ+VDV+G + G GF+G Sbjct: 66 KPEAGHFAKAGVTPRRYTVEIRTT-DAAEYSLGQEITAETFTQGQIVDVSGTSKGHGFAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF GL A HGV HRS GS G PGRVFK +MAGRMG RVTV+NL V +V Sbjct: 125 VMKRHNFKGLGAGHGVQRKHRSPGSIGACATPGRVFKGVRMAGRMGSARVTVQNLTVQAV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D ++GLILVKG +PG +LV+ S K Sbjct: 185 DAEKGLILVKGAIPGPN-GGLVLVKTSVKKGA 215 >gi|126697640|ref|YP_001086537.1| 50S ribosomal protein L3 [Clostridium difficile 630] gi|254973731|ref|ZP_05270203.1| 50S ribosomal protein L3 [Clostridium difficile QCD-66c26] gi|255091120|ref|ZP_05320598.1| 50S ribosomal protein L3 [Clostridium difficile CIP 107932] gi|255099232|ref|ZP_05328209.1| 50S ribosomal protein L3 [Clostridium difficile QCD-63q42] gi|255305015|ref|ZP_05349187.1| 50S ribosomal protein L3 [Clostridium difficile ATCC 43255] gi|255312775|ref|ZP_05354358.1| 50S ribosomal protein L3 [Clostridium difficile QCD-76w55] gi|255515534|ref|ZP_05383210.1| 50S ribosomal protein L3 [Clostridium difficile QCD-97b34] gi|255648629|ref|ZP_05395531.1| 50S ribosomal protein L3 [Clostridium difficile QCD-37x79] gi|255654162|ref|ZP_05399571.1| 50S ribosomal protein L3 [Clostridium difficile QCD-23m63] gi|260681846|ref|YP_003213131.1| 50S ribosomal protein L3 [Clostridium difficile CD196] gi|260685444|ref|YP_003216577.1| 50S ribosomal protein L3 [Clostridium difficile R20291] gi|296449799|ref|ZP_06891568.1| 50S ribosomal protein L3 [Clostridium difficile NAP08] gi|296877863|ref|ZP_06901885.1| 50S ribosomal protein L3 [Clostridium difficile NAP07] gi|306518752|ref|ZP_07405099.1| 50S ribosomal protein L3 [Clostridium difficile QCD-32g58] gi|123174670|sp|Q18CG0|RL3_CLOD6 RecName: Full=50S ribosomal protein L3 gi|115249077|emb|CAJ66888.1| 50S ribosomal protein L3 [Clostridium difficile] gi|260208009|emb|CBA60186.1| 50S ribosomal protein L3 [Clostridium difficile CD196] gi|260211460|emb|CBE01579.1| 50S ribosomal protein L3 [Clostridium difficile R20291] gi|296261397|gb|EFH08223.1| 50S ribosomal protein L3 [Clostridium difficile NAP08] gi|296431163|gb|EFH16988.1| 50S ribosomal protein L3 [Clostridium difficile NAP07] Length = 209 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 94/209 (44%), Positives = 128/209 (61%), Gaps = 4/209 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GMT ++ +G IPVT + V +T+DK+GY A+Q+G +AK K ++ Sbjct: 2 KGILGKKVGMTQIFTDKGVVIPVTAVEAGPMVVTQIKTVDKDGYNAIQIGFEDAKEKALN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP +G ++ NV KK L EFRV + VG F G +DVTG++ GKGF G Sbjct: 62 KPKKGHLAAANV-LKKHLKEFRVDS-VEGYTVGQEIKADVFEAGAKIDVTGISKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH THG S HR GS G PGRVFKNKK+AG MG +VTV+NLEVV V Sbjct: 120 PIKRHGQSRGPETHG-SRYHRRPGSMGACSYPGRVFKNKKLAGHMGSVKVTVQNLEVVKV 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D + LILVKG +PGA K S + ++++ K Sbjct: 179 DADKNLILVKGAIPGA-KGSVVTIKEAIK 206 >gi|257095040|ref|YP_003168681.1| 50S ribosomal protein L3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047564|gb|ACV36752.1| ribosomal protein L3 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 214 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 101/215 (46%), Positives = 132/215 (61%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT ++ +G +PVTVL + N +V +T +GY VQV G+ + Sbjct: 1 MSLGLVGRKVGMTRIFTDDGISVPVTVLDVSNNRVAQIKTPQNDGYSVVQVAFGKRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQ-KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 VSKP+ G + V L EF V + L G S + F VGQ VDVTG TIGKG Sbjct: 61 VSKPLAGHLAKAGVEAGHVLKEFPVSVAELATLKPGDQISVTIFAVGQKVDVTGKTIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRH+F A HG S+SH++ GSTG QDPGRVF KKMAG +G + T +NLEV Sbjct: 121 FSGGIKRHHFSSQGAAHGNSVSHQALGSTGMAQDPGRVFPGKKMAGHLGAVKRTQQNLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 V VD R L+L+KG VPG+ K S ++VR + K+ Sbjct: 181 VRVDVDRQLLLLKGAVPGS-KGSDVIVRPAVKAGA 214 >gi|75906914|ref|YP_321210.1| 50S ribosomal protein L3 [Anabaena variabilis ATCC 29413] gi|109893410|sp|Q3MFC1|RL3_ANAVT RecName: Full=50S ribosomal protein L3 gi|75700639|gb|ABA20315.1| LSU ribosomal protein L3P [Anabaena variabilis ATCC 29413] Length = 211 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 84/211 (39%), Positives = 125/211 (59%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT +++ G IPVTV+ + C V ++ +GY A+QVG GE K K Sbjct: 1 MSVGILGTKLGMTQIFDEAGVAIPVTVVQVGPCVVTQVKSKQTDGYAAIQVGYGEVKPKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P+ G + + + L E+ D +G F+ G+LVDV G +IG+GF Sbjct: 61 LNRPLLGHLAKSSAPALRHLKEYHTDSSSD-YALGQEIKADIFSAGELVDVIGTSIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KR+NFG +HG S +HR+ GS G PGRV+ K+MAGR+GG RVT++ L V+ Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGTRVTIRKLTVI 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L+L+KG VPG S + + + K Sbjct: 179 RVDAERNLLLIKGAVPGKP-GSLLSIVPAKK 208 >gi|239787563|emb|CAX84031.1| 50S ribosomal protein L3 [uncultured bacterium] Length = 213 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 98/212 (46%), Positives = 135/212 (63%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++ RKLGM+ ++ +G+ + VT++ + C +V + + +GY AVQ+G +AK Sbjct: 1 MRAGLIGRKLGMSRIFTADGKSVAVTLVKVGPCPIVGVKRGEPDGYEAVQLGYEDAKPSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V KP RG F+ NV P++ L EFRV P G + F VG VDVTG ++GKGF Sbjct: 61 VKKPERGVFAKANVPPQRILKEFRVDDASGYQP-GESLGLNLFEVGGRVDVTGRSVGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR F G RA+HG ++HRS GS G Q PGRVFKNKKMAG MG VT L V Sbjct: 120 AGGMKRWGFRGGRASHGAHLTHRSPGSIGQCQTPGRVFKNKKMAGHMGDVNVTAMGLTVA 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+++KG VPG+ K S + +RD+ K+ Sbjct: 180 MVDLERNLLVLKGSVPGS-KGSVVFIRDAVKA 210 >gi|34764925|ref|ZP_00145270.1| LSU ribosomal protein L3P [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27885736|gb|EAA23133.1| LSU ribosomal protein L3P [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 211 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 135/212 (63%), Gaps = 3/212 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT ++ +G+ +PVTV+ V+ +T +K+GY+A+Q+G E K KN + Sbjct: 2 SGILGKKIGMTQIF-EDGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ V P++ + E V+ D +G T + VD+TG + GKG SG Sbjct: 61 KPLMGIFNKAGVKPQRFVKELAVESVDG-YELGQEIKVDVLTEVEYVDITGTSKGKGTSG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGG RA+HGVS +HR GS G PG+V K K+MAG+ G VTV+NL+VV V Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D + L+L+KG VPGA KN ++++R + K + Sbjct: 180 DAEHNLLLIKGAVPGA-KNGYLVIRPAVKKVI 210 >gi|319940060|ref|ZP_08014414.1| 50S ribosomal protein L3 [Streptococcus anginosus 1_2_62CV] gi|319810774|gb|EFW07101.1| 50S ribosomal protein L3 [Streptococcus anginosus 1_2_62CV] Length = 208 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVVEATPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFEAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+ Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIA 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+ Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAG 207 >gi|213425750|ref|ZP_03358500.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 199 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 91/201 (45%), Positives = 125/201 (62%), Gaps = 2/201 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+KP G F+ Sbjct: 1 MTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVTKPEAGHFAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G +KR NF Sbjct: 61 AGVEAGRGLWEFRLAEGEE-YTVGQSISVELFADVKKVDVTGTSKGKGFAGTVKRWNFRT 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV VD +R L+LV Sbjct: 120 QDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAERNLLLV 179 Query: 192 KGCVPGAKKNSWILVRDSFKS 212 KG VPGA ++V+ + K+ Sbjct: 180 KGGVPGA-TGCDLIVKPAVKA 199 >gi|170780733|ref|YP_001709065.1| 50S ribosomal protein L3 [Clavibacter michiganensis subsp. sepedonicus] gi|212288255|sp|B0RB39|RL3_CLAMS RecName: Full=50S ribosomal protein L3 gi|169155301|emb|CAQ00404.1| 50S ribosomal protein L3 [Clavibacter michiganensis subsp. sepedonicus] Length = 217 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 92/210 (43%), Positives = 124/210 (59%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 +G++ KLGMT V++ + IPVTV+ + V RT + +GY A+Q+ G+ + Sbjct: 9 TGLLGTKLGMTQVWDENNKLIPVTVVQITPNVVTQVRTPEVDGYGAIQIAYGQIDPRKAD 68 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P++ L E R D +G + F G VDV G + GKGF+G Sbjct: 69 KPSTGHFDKAGVTPRRHLTEVR-TADFAEYTLGQEITVGAFEPGTKVDVVGTSKGKGFAG 127 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF G+ A+HG +HR GS G P RVFK +MAGRMGG RVTV NL V SV Sbjct: 128 VMKRHNFKGVSASHGSHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGERVTVLNLVVHSV 187 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D ++GL+LVKG VPGA + + VR++ K Sbjct: 188 DAEKGLLLVKGAVPGA-RGRIVFVRNAVKG 216 >gi|320529796|ref|ZP_08030873.1| 50S ribosomal protein L3 [Selenomonas artemidis F0399] gi|320137814|gb|EFW29719.1| 50S ribosomal protein L3 [Selenomonas artemidis F0399] Length = 220 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 97/219 (44%), Positives = 130/219 (59%), Gaps = 5/219 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 + ++ RKLGMT ++ EGR +PVTV+ N V+ ++T + +GY AVQ+G G+ K KN Sbjct: 4 LAKAILGRKLGMTQIFTEEGRVVPVTVVESGNNLVLRNKTNETDGYNAVQIGFGDVKEKN 63 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++G F V + + E R+ VG F G LVDV G + GKGF Sbjct: 64 VTKPLKGQFEKAGVKAVRFIREMRLSAP-SKYNVGDTIGVDIFAEGDLVDVVGTSKGKGF 122 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KRHNF HG S SHR GSTG GRV K KK+ GRMGG RVTV+ L Sbjct: 123 AGGIKRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLT 181 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 VV VD R LIL+KG +PG KK +++++D+ K A K Sbjct: 182 VVRVDTDRNLILIKGAIPGPKKG-FVVIKDTVKPAKAAK 219 >gi|295093643|emb|CBK82734.1| LSU ribosomal protein L3P [Coprococcus sp. ART55/1] Length = 227 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 87/229 (37%), Positives = 123/229 (53%), Gaps = 19/229 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT +++ G PVTVL C V +T++ +GY A+QVG GE K + Sbjct: 1 MKKAILATKVGMTQIFDENGVLTPVTVLQAGPCVVTQIKTVENDGYDAIQVGFGEKKERV 60 Query: 61 VSK----------------PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 +K G +PK EFR++ + +G+ F Sbjct: 61 TTKDVSGKKVIRNPHGAGKAEVGHAKKAGTTPKAFYREFRLENTAE-YELGAEIKADVFA 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G +DVT + GKG++G +KRH + HG S HR GS G PGRVFK KKM Sbjct: 120 AGDKIDVTAKSKGKGYAGGLKRHGLKSGPSGHG-SKYHRHAGSNGSATTPGRVFKGKKMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 G MG RVT++NLEVV +D + +ILVKG VPG KK S ++++D+ KS Sbjct: 179 GHMGSVRVTIQNLEVVKIDVENNVILVKGAVPGPKK-SLVMIKDTVKSG 226 >gi|77918315|ref|YP_356130.1| 50S ribosomal protein L3 [Pelobacter carbinolicus DSM 2380] gi|109893533|sp|Q3A6P7|RL3_PELCD RecName: Full=50S ribosomal protein L3 gi|77544398|gb|ABA87960.1| LSU ribosomal protein L3P [Pelobacter carbinolicus DSM 2380] Length = 210 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 93/212 (43%), Positives = 128/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT V+ ++G+ IPVTV+ C V+ +T +K+GY A+Q+G G K ++ Sbjct: 1 MTKGILGKKLGMTQVFAVDGKCIPVTVVEAGPCVVLQKKTEEKDGYNALQLGFGAKKTQS 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119 V+KP G F + L E + DD VG + +F G ++DVTG + GKG Sbjct: 61 VNKPAMGHFKKSGKGAFEFLREVECENIDDH-AVGDEITCDGFFATGDVIDVTGTSKGKG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR NF G RA+HG S+ HR G G P RVFK KKMAG+MG RVT + LEV Sbjct: 120 FQGVIKRWNFAGGRASHG-SMFHRRPGGIGASAWPSRVFKGKKMAGQMGNKRVTTQGLEV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V V ++ L+L+KG VPG N +L+R S K Sbjct: 179 VDVRPEKSLVLIKGAVPGPV-NGLLLIRKSRK 209 >gi|34541541|ref|NP_906020.1| 50S ribosomal protein L3 [Porphyromonas gingivalis W83] gi|188995732|ref|YP_001929984.1| 50S ribosomal protein L3 [Porphyromonas gingivalis ATCC 33277] gi|42559592|sp|Q7MTL3|RL3_PORGI RecName: Full=50S ribosomal protein L3 gi|226730547|sp|B2RLZ2|RL3_PORG3 RecName: Full=50S ribosomal protein L3 gi|34397858|gb|AAQ66919.1| ribosomal protein L3 [Porphyromonas gingivalis W83] gi|188595412|dbj|BAG34387.1| 50S ribosomal protein L3 [Porphyromonas gingivalis ATCC 33277] Length = 205 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 90/204 (44%), Positives = 131/204 (64%), Gaps = 4/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EG+ +P TV+ + C V +TL+K+GY A+Q+G +AK K+ +K Sbjct: 3 GLLGKKIGMTSVFSAEGKNLPCTVIEVGPCVVTQVKTLEKDGYSALQLGFVDAKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F NV+PK+ L EF+ + +G V + +F+ VDV G + GKGF G Sbjct: 63 PLAGHFKKANVAPKRHLAEFK--NFEGEHKLGDVLNVEFFSDADFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG +ATHG R+ G+ G P +VFK +MAG+MG RVTV+NLEV+ V Sbjct: 121 VKRHGFGGVGQATHGQHNRLRAPGAVGACSYPAKVFKGTRMAGQMGNERVTVQNLEVIKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 + L+LVKG VPGA K S +L+ Sbjct: 181 MPEHNLLLVKGSVPGA-KGSILLI 203 >gi|224510783|pdb|3FIN|E Chain E, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas And Ef-Tu.Gdp.Kirromycin Ternary Complex, Fitted To A 6.4 A Cryo-Em Map. This File Contains The 50s Subunit Length = 205 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 93/211 (44%), Positives = 125/211 (59%), Gaps = 7/211 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ K+GMT ++ + R +PVTV+ C VV RT +K+GY AVQ+G K V+ Sbjct: 2 KGILGVKVGMTRIFRDD-RAVPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLPQNPKRVN 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 +P++G F+ V P + L E R D P G + F G+ VDVTG + G+GF+G Sbjct: 61 RPLKGHFAKAGVEPVRILREIR-----DFNPEGDTVTVEIFKPGERVDVTGTSKGRGFAG 115 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKR NF G +HG HR GS G R+ PGRV+K KKMAG G RVTV NLEVV V Sbjct: 116 VMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGHYGAERVTVMNLEVVDV 175 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + L+LVKG VPG ++VR++ K+A Sbjct: 176 IPEENLLLVKGAVPGPN-GGLVIVRETKKAA 205 >gi|300868356|ref|ZP_07112982.1| 50S ribosomal protein L3 [Oscillatoria sp. PCC 6506] gi|300333649|emb|CBN58170.1| 50S ribosomal protein L3 [Oscillatoria sp. PCC 6506] Length = 211 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 90/211 (42%), Positives = 125/211 (59%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT V++ +GR IPVTV+ C V +T +GY A+QVG G+ K K Sbjct: 1 MSVGILGTKLGMTQVFDEQGRAIPVTVIQAGPCTVTQIKTKQTDGYAAIQVGYGDVKAKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP G + +P + L E+R+ +D +G FT GQ+VDV G +IGKGF Sbjct: 61 LNKPELGHLAKSGATPVRHLQEYRL-EDIGEFQLGQQVKADLFTPGQIVDVIGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRHNF HG S +HR GS G PGRV+ K+MAGR+G ++TV+ L V+ Sbjct: 120 AGFQKRHNFKRGPMAHG-SKNHRQPGSIGPGTTPGRVYPGKRMAGRLGNVQITVRKLTVL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L+L+KG VPG K + + V K Sbjct: 179 RVDTERNLLLIKGAVPG-KAGALVNVVPEKK 208 >gi|296119209|ref|ZP_06837779.1| 50S ribosomal protein L3 [Corynebacterium ammoniagenes DSM 20306] gi|295967835|gb|EFG81090.1| 50S ribosomal protein L3 [Corynebacterium ammoniagenes DSM 20306] Length = 217 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 84/214 (39%), Positives = 123/214 (57%), Gaps = 2/214 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +KLGMT V++ E R +PVTV+ C V RT++ +GY A+Q+ GE + + Sbjct: 6 KGILGKKLGMTQVFDEENRVVPVTVVEAGPCVVTQIRTVENDGYNAIQIAYGEIDPRKAN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P++ + E R+ D VG + F VDVTG + G G++G Sbjct: 66 KPASGHFKKAGVTPRRHVAEIRMD-DVTAYEVGQDVTVEVFEGITFVDVTGTSKGHGYAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRH F G A HG +HR G G PGRVFK K+MAGRMG +RVT +NL++ + Sbjct: 125 AMKRHGFAGQGAAHGNQAAHRRVGGIGGAATPGRVFKGKRMAGRMGSDRVTTQNLKIQKI 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D + L+L+KG +PG + + V+ + K + Sbjct: 185 DAESNLLLIKGAIPGV-RGGLVTVKTAVKGGAHA 217 >gi|258542027|ref|YP_003187460.1| 50S ribosomal protein L3 [Acetobacter pasteurianus IFO 3283-01] gi|256633105|dbj|BAH99080.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-01] gi|256636162|dbj|BAI02131.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-03] gi|256639217|dbj|BAI05179.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-07] gi|256642271|dbj|BAI08226.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-22] gi|256645326|dbj|BAI11274.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-26] gi|256648381|dbj|BAI14322.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-32] gi|256651434|dbj|BAI17368.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654425|dbj|BAI20352.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-12] Length = 227 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 128/219 (58%), Positives = 165/219 (75%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+KLGM+ ++ +G +PVTVLH+D+ QVV R +++GY+AVQ+G G+AKVKN Sbjct: 1 MRTGLIAKKLGMSRLFKEDGTHVPVTVLHVDDVQVVDVRNQERDGYVAVQLGMGKAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP RG F+ V PK+ L EFRV DD L VG+ S S+F VGQ VDVTG++ GKGF Sbjct: 61 VTKPNRGHFARTKVEPKQALREFRV-ADDAALEVGATLSASHFVVGQKVDVTGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GAMKR NF GL ATHGVSISHRSHGSTG RQDPG+ FKNKKMAG +G RVT NLE+ Sbjct: 120 AGAMKRWNFAGLEATHGVSISHRSHGSTGNRQDPGKTFKNKKMAGHLGDERVTTLNLEIA 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 +VD ++ LI+V+G VPGA KN +L+RD+ K A + Sbjct: 180 AVDPEKNLIMVRGSVPGA-KNGVVLIRDAIKKARHGDAP 217 >gi|148273801|ref|YP_001223362.1| 50S ribosomal protein L3 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|212288254|sp|A5CUB3|RL3_CLAM3 RecName: Full=50S ribosomal protein L3 gi|147831731|emb|CAN02700.1| 50S ribosomal protein L3 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 217 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 92/210 (43%), Positives = 124/210 (59%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 +G++ KLGMT V++ + IPVTV+ + V RT + +GY A+Q+ G+ + Sbjct: 9 TGLLGTKLGMTQVWDENNKLIPVTVVQITPNVVTQVRTPEVDGYGAIQIAYGQIDPRKAD 68 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P++ L E R D +G + F G VDV G + GKGF+G Sbjct: 69 KPSTGHFDKAGVTPRRHLTEVR-TADFAEYALGQEITVGAFEPGTKVDVVGTSKGKGFAG 127 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNF G+ A+HG +HR GS G P RVFK +MAGRMGG RVTV NL V SV Sbjct: 128 VMKRHNFKGVSASHGSHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGERVTVLNLVVHSV 187 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D ++GL+LVKG VPGA + + VR++ K Sbjct: 188 DAEKGLLLVKGAVPGA-RGRIVFVRNAVKG 216 >gi|257454047|ref|ZP_05619321.1| 50S ribosomal protein L3 [Enhydrobacter aerosaccus SK60] gi|257448525|gb|EEV23494.1| 50S ribosomal protein L3 [Enhydrobacter aerosaccus SK60] Length = 212 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 94/213 (44%), Positives = 133/213 (62%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V +K GMT ++ G IPVTV+ + ++ +T D +GY A+QV GE + Sbjct: 1 MAIGLVGKKCGMTRIFTEAGVSIPVTVVEVTANRISQIKTQDTDGYQAIQVTTGERRDSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + +EFRV+ + + GS + F VGQ+VDV G + GKG Sbjct: 61 VNAAQKGHFAKAGVAAGRGTWEFRVEDSELEGREAGSEIAADLFQVGQIVDVIGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KRHNF THG S+SHR GSTG Q PGRVFK KKM G+MG RVTV+ LEV Sbjct: 121 FQGGIKRHNFRSQDWTHGNSVSHRVVGSTGQNQTPGRVFKGKKMPGQMGNKRVTVQGLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +SVD ++G++++KG +PGA ++VR S K+ Sbjct: 181 ISVDAEKGILVIKGAIPGANGGD-VIVRPSVKA 212 >gi|94985967|ref|YP_605331.1| 50S ribosomal protein L3 [Deinococcus geothermalis DSM 11300] gi|122986549|sp|Q1IX72|RL3_DEIGD RecName: Full=50S ribosomal protein L3 gi|94556248|gb|ABF46162.1| ribosomal protein L3 [Deinococcus geothermalis DSM 11300] Length = 207 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 91/213 (42%), Positives = 120/213 (56%), Gaps = 7/213 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT ++ + R +PVTV+ C VV +T +GY AVQ+G K Sbjct: 1 MTKGILGTKIGMTQIWKGD-RAVPVTVVLAGPCPVVQRKTKLTDGYEAVQLGFAPKSEKR 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++P G F V+P + L EFR D P G + F G+ +D TG + GKG Sbjct: 60 VNRPELGHFKKAGVAPMRFLREFR-----DFAPEGDTVNVDIFAEGEKIDATGTSKGKGT 114 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G MKR NF G A+HG HR GS G R+ PGRV+K K+MAG MG RVTV+NLEVV Sbjct: 115 QGVMKRWNFAGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGHMGMERVTVQNLEVV 174 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V LILVKG +PGA +++R + K Sbjct: 175 EVRADENLILVKGAIPGAN-GGLVMLRQAAKGG 206 >gi|227876215|ref|ZP_03994331.1| ribosomal protein L3 [Mobiluncus mulieris ATCC 35243] gi|307701180|ref|ZP_07638202.1| 50S ribosomal protein L3 [Mobiluncus mulieris FB024-16] gi|227843176|gb|EEJ53369.1| ribosomal protein L3 [Mobiluncus mulieris ATCC 35243] gi|307613574|gb|EFN92821.1| 50S ribosomal protein L3 [Mobiluncus mulieris FB024-16] Length = 218 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 88/210 (41%), Positives = 129/210 (61%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 ++ RKLGMT V++ EG+ +PVTV+ ++ V RT +++GY A+Q+G G+ + V+ Sbjct: 10 KALLGRKLGMTQVWDEEGKLVPVTVVEVEKNVVTDIRTPERDGYTALQLGFGQLDERKVT 69 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KPM G F+ V+P++ L E R D +G F G LVDVTG T GKGF+G Sbjct: 70 KPMAGHFAKSGVTPRRHLAEVRTT-DAGSYELGQELGADLFETGALVDVTGNTKGKGFAG 128 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ ++HG +HR GS G PGRVF+ MAGRMGG R T+ NL+V ++ Sbjct: 129 VMKRHGFQGVSSSHGAHRNHRKPGSIGACATPGRVFRGLNMAGRMGGERRTIMNLKVQAI 188 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +GL+++ G +PG K +++R + K Sbjct: 189 DADKGLVVIAGAIPGP-KGGIVMIRSAVKG 217 >gi|254579248|ref|XP_002495610.1| ZYRO0B15444p [Zygosaccharomyces rouxii] gi|238938500|emb|CAR26677.1| ZYRO0B15444p [Zygosaccharomyces rouxii] Length = 273 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 99/218 (45%), Positives = 148/218 (67%), Gaps = 2/218 (0%) Query: 1 MRSGVVARKLGMTCVYNI-EGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R G + +K GM ++ G+R+ TVL +DN +V++HRT+++NGY A QVG G + Sbjct: 56 LRCGALTKKEGMMPFFDEATGKRVACTVLKMDNVEVLMHRTMEENGYFACQVGYGSKHPQ 115 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 VS+ M G F+S V+PK+++ EFRV+ +D LLP+G++ PS+F GQ VD+ + GKG Sbjct: 116 KVSRQMLGHFASKLVNPKERVSEFRVKNEDGLLPLGTLIKPSFFNNGQYVDLKSICKGKG 175 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MK+++F GLRA+HG SI HR GS G QDPGRV KKM G MG + VT++N +V Sbjct: 176 FAGVMKKYHFAGLRASHGTSIMHRHGGSYGQNQDPGRVLPGKKMPGHMGNHHVTIQNAQV 235 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 + VDD+ G+IL+KG V G +++ ++D+ K A + Sbjct: 236 LKVDDELGVILIKGSVAGP-TGAFVKIQDAIKKAPASE 272 >gi|58267640|ref|XP_570976.1| ribosomal large subunit assembly and maintenance-related protein [Cryptococcus neoformans var. neoformans JEC21] gi|134112043|ref|XP_775557.1| hypothetical protein CNBE2710 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258216|gb|EAL20910.1| hypothetical protein CNBE2710 [Cryptococcus neoformans var. neoformans B-3501A] gi|57227210|gb|AAW43669.1| ribosomal large subunit assembly and maintenance-related protein, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 308 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 103/222 (46%), Positives = 140/222 (63%), Gaps = 4/222 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVK 59 +R+G++ARK GMT +++ +GRR PVTVL +D QVV H + Y +Q+GA + K Sbjct: 43 LRTGLIARKRGMTALWDADGRRWPVTVLQVDANQVVRHSPPPPTSPYHTLQIGASPRREK 102 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +K G F V PK +L EF+V +D ++PVG+ S +F GQ VDV G+TIGKG Sbjct: 103 TTTKQQLGHFKKAGVEPKYRLKEFQVSED-AVVPVGTELSAGHFVPGQFVDVQGVTIGKG 161 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKRH F GL+A+HG S+ HRS GS G QDPGRV KKM G MG T +NL + Sbjct: 162 FQGVMKRHGFRGLKASHGTSVKHRSPGSIGQNQDPGRVIPGKKMPGHMGNVTRTTQNLLI 221 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 VD L+ V+GCVPG+ +S++ V+DS K V K +++ Sbjct: 222 HRVDHVLNLLYVRGCVPGSD-DSFLYVKDS-KKLVKSKAQLA 261 >gi|255083651|ref|XP_002508400.1| predicted protein [Micromonas sp. RCC299] gi|226523677|gb|ACO69658.1| predicted protein [Micromonas sp. RCC299] Length = 259 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 102/215 (47%), Positives = 137/215 (63%), Gaps = 2/215 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 RSG +A K GMT +N G R+P+TVL +D+C+V +T +K GY A+Q+GAG K K + Sbjct: 14 RSGAIAVKCGMTAEWNEHGVRVPLTVLWIDDCRVTQVKTQEKEGYTALQLGAGSKKAKRL 73 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 ++ RG F + +V +L EFRV D +LPVG+ S+F+ GQ VD+ G TIGKGF Sbjct: 74 NRSERGHFIAGDVPFSAELTEFRVSPD-AILPVGTAIGASHFSAGQYVDIQGRTIGKGFQ 132 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR F GL A+HG + HR+HGS G QDPGRV+K KKMAGRMG TV+++ V Sbjct: 133 GPMKRWGFSGLPASHGTTKKHRAHGSIGNSQDPGRVWKGKKMAGRMGNRTRTVQSVFVYK 192 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 VD R L+ VKG VPG K ++ + D+ + Sbjct: 193 VDADRNLLYVKGQVPG-KAGRFLKITDALRKPPET 226 >gi|295101414|emb|CBK98959.1| LSU ribosomal protein L3P [Faecalibacterium prausnitzii L2-6] Length = 210 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 126/212 (59%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT +++ G+ IPVTV+ C VV +T++ +GY AVQ+G GE K Sbjct: 1 MVKGIIGKKVGMTQLFDESGKVIPVTVIEAGPCTVVQKKTVESDGYQAVQLGFGEVSAKK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F NV+PKK L EFR+ +D + VG V F G VDV G++ GKG+ Sbjct: 61 VNKAAAGHFKKANVAPKKTLREFRL-EDVSAMNVGDVLKADVFAAGDKVDVVGVSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR+ LR +HG R GS G P RVF K++ G MG RVTV+NL VV Sbjct: 120 QGVIKRYGQHRLRESHGTGPVARHAGSNGSTSTPSRVFPGKRLPGHMGFVRVTVQNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + LI VKG VPG+ K + + + +S K+ Sbjct: 180 KVDTENNLIAVKGAVPGS-KGTIVTLANSVKA 210 >gi|294341610|emb|CAZ90027.1| 50S ribosomal protein L3 [Thiomonas sp. 3As] Length = 215 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 98/212 (46%), Positives = 133/212 (62%), Gaps = 2/212 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V RK+GMT V+ +G I VTVL +V RT D +GY AVQV G K ++ Sbjct: 1 MGLVTRKVGMTRVFTDDGASIAVTVLDASGNRVSQVRTQDVDGYSAVQVAYGSRKPSRLT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 K G + V P + L EF + + G+ S F VGQ+VD G++IGKGF+ Sbjct: 61 KGQAGHLAKAGVEPAEILKEFDLPAEKAADYAPGATVPASLFQVGQMVDAQGVSIGKGFA 120 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G++KRHNF RA+HG S++ R+ GS G QDPGRVF K+MAG+MG VTV+NLEVV Sbjct: 121 GSIKRHNFSSNRASHGNSVTTRAPGSIGMAQDPGRVFPGKRMAGQMGNETVTVQNLEVVR 180 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +D+ R LILVKG VPG+ ++ ++ +R + KSA Sbjct: 181 IDEARQLILVKGAVPGS-RSGFVFLRPAVKSA 211 >gi|288574662|ref|ZP_06393019.1| ribosomal protein L3 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570403|gb|EFC91960.1| ribosomal protein L3 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 208 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 95/206 (46%), Positives = 133/206 (64%), Gaps = 2/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT +YN G+ +PVTV+ C V+ RT +KNGY A+ +G G+ K + Sbjct: 1 MSLGILGQKLGMTQIYNENGQAVPVTVVEAGPCPVLAVRTEEKNGYDAILLGFGKVKPRK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP++GFF K+ L EFR+ D VG+ + F G+ VD TG++ GKGF Sbjct: 61 VTKPLKGFFDKAQSEAKRWLKEFRISNASD-YEVGNAVDVTIFEAGEKVDATGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR+NFGG A+HGVS +HR S+G P VFK K M G++G +VTVKNL VV Sbjct: 120 AGVIKRYNFGGAPASHGVSKTHRKPNSSGASSYPSHVFKGKTMPGQLGNEQVTVKNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 +VD + L+LVKG +PGA KN +L+ Sbjct: 180 AVDVENNLVLVKGAIPGA-KNGLVLL 204 >gi|325269535|ref|ZP_08136151.1| 50S ribosomal protein L3 [Prevotella multiformis DSM 16608] gi|324988154|gb|EGC20121.1| 50S ribosomal protein L3 [Prevotella multiformis DSM 16608] Length = 204 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 84/205 (40%), Positives = 125/205 (60%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G GEAK K SK Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKTVEKDGYKAVQLGFGEAKEKRTSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G F +PKK L EF+ ++ +G + F + VD+ G + GKGF G Sbjct: 63 PQQGHFKKAGTTPKKHLAEFKFDEE---YNLGDTITVELFNDAKFVDIVGTSKGKGFQGV 119 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG ++THG R GS G P +VFK +MAG+MGG+RVT +NL+V+ V Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLQVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + L+LVKG V G ++ I+ + Sbjct: 180 IPEHNLLLVKGSVAGCNGSTVIIKK 204 >gi|308070975|ref|YP_003872580.1| 50S ribosomal protein L3 [Paenibacillus polymyxa E681] gi|310644202|ref|YP_003948961.1| 50S ribosomal protein l3 [Paenibacillus polymyxa SC2] gi|305860254|gb|ADM72042.1| 50S ribosomal protein L3 [Paenibacillus polymyxa E681] gi|309249153|gb|ADO58720.1| 50S ribosomal protein L3 [Paenibacillus polymyxa SC2] Length = 207 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 83/210 (39%), Positives = 117/210 (55%), Gaps = 4/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +KLGMT V+ EG + VTV+ C V+ + L+ +GY A+Q+G + K K + Sbjct: 2 KGILGKKLGMTQVFTPEGNVLAVTVIEAGPCVVLQKKDLENDGYEAIQLGFSDKKEKRSN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G N +PK+ + E R D VG FT G+ VDVTG++ GKGF+G Sbjct: 62 KPEAGHAKKANTAPKRYVRELRG-IDLAAYEVGQELKADVFTEGEFVDVTGISKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR HG S HR GS G Q RV K K + G MG VT++ LEVV + Sbjct: 121 VIKRWGQSRGPMAHG-SRYHRGPGSMGSIQ-ANRVPKGKHLPGHMGHETVTIQRLEVVKI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R ++LVKG +PG KNS++ V ++ K Sbjct: 179 DTERNVLLVKGSIPGP-KNSFVKVLETVKK 207 >gi|157826063|ref|YP_001493783.1| 50S ribosomal protein L3 [Rickettsia akari str. Hartford] gi|166234584|sp|A8GPF0|RL3_RICAH RecName: Full=50S ribosomal protein L3 gi|157800021|gb|ABV75275.1| 50S ribosomal protein L3 [Rickettsia akari str. Hartford] Length = 215 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 111/212 (52%), Positives = 163/212 (76%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+K+GMT V+N +G RIP+T++ +D+CQVV H+TL+K+GY A+ +G + K+ Sbjct: 1 MRTGIIAQKIGMTSVFNDKGERIPLTLVKVDDCQVVGHKTLEKHGYNALVIGIKDKKISR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+ F++ +SPK KL EFR+ + + + + + +F GQ VD+T TIGKGF Sbjct: 61 VTKPMKQVFANAKISPKTKLKEFRISEG-NFIDIAANLEVDHFMAGQFVDITATTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +VD +R LI+++G +PG KNS++ ++D+ K Sbjct: 180 AVDRERKLIMIRGSIPG-HKNSYLSIKDAVKK 210 >gi|315222820|ref|ZP_07864706.1| 50S ribosomal protein L3 [Streptococcus anginosus F0211] gi|315188123|gb|EFU21852.1| 50S ribosomal protein L3 [Streptococcus anginosus F0211] Length = 208 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 6/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVVEAAPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAEITVDTFAAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+ Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIA 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ +IL+KG VPGAKK S I ++ + K+ Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAG 207 >gi|225175674|ref|ZP_03729668.1| ribosomal protein L3 [Dethiobacter alkaliphilus AHT 1] gi|225169003|gb|EEG77803.1| ribosomal protein L3 [Dethiobacter alkaliphilus AHT 1] Length = 213 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 92/217 (42%), Positives = 128/217 (58%), Gaps = 4/217 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT V+ EG+ IPVTV+ C VV +T + +GY AVQ G G K K+ Sbjct: 1 MQKAILGKKVGMTQVFTEEGKVIPVTVIEAGPCVVVQKKTKEVDGYDAVQFGYGAIKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP+ G F PKK + E R+ +D VG F G VD++G+T GKGF Sbjct: 61 VTKPLAGHFKKAEQEPKKYIREMRL-EDTASYEVGQEVKADVFAEGDWVDISGVTRGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GA+KRH FG THG HR GS G D RVFK +K+ GRMGG +VTV+ L+VV Sbjct: 120 AGAIKRHGFGRGPTTHGSH-YHRGPGSLGAV-DAARVFKGRKLPGRMGGVKVTVQKLKVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 VD R L+L+ G VPG + + ++++ K+ K Sbjct: 178 KVDTDRNLLLIHGAVPGP-RGGLVTLKNTVKNVKEAK 213 >gi|228474733|ref|ZP_04059464.1| 50S ribosomal protein L3 [Staphylococcus hominis SK119] gi|314935832|ref|ZP_07843184.1| 50S ribosomal protein L3 [Staphylococcus hominis subsp. hominis C80] gi|228271396|gb|EEK12764.1| 50S ribosomal protein L3 [Staphylococcus hominis SK119] gi|313656397|gb|EFS20137.1| 50S ribosomal protein L3 [Staphylococcus hominis subsp. hominis C80] Length = 220 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 91/221 (41%), Positives = 122/221 (55%), Gaps = 11/221 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ + V+ +T + +GY A+QVG + + Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEANQNVVLQKKTEEVDGYNAIQVGFADKQAYK 60 Query: 61 V--------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 +KP G +PK+ + EFR D+ VG + F G ++DVT Sbjct: 61 KDAKSNKYANKPAEGHAKKAGAAPKRFIREFRNVNVDE-YEVGQEVTVDTFEAGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G + GKGF GA+KRH G HG HR+ GS G D RVFK +KM GRMGGN V Sbjct: 120 GTSKGKGFQGAIKRHGQGRGPMAHGSH-FHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 TV+NLEVV VD +ILVKG VPG KK ++ ++ S K Sbjct: 179 TVQNLEVVQVDTDNNVILVKGNVPGPKKG-FVEIKSSIKKG 218 >gi|118579119|ref|YP_900369.1| 50S ribosomal protein L3 [Pelobacter propionicus DSM 2379] gi|166233173|sp|A1ALU1|RL3_PELPD RecName: Full=50S ribosomal protein L3 gi|118501829|gb|ABK98311.1| LSU ribosomal protein L3P [Pelobacter propionicus DSM 2379] Length = 209 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 85/201 (42%), Positives = 121/201 (60%), Gaps = 3/201 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++ +G R+PVTV+ C V +T +GY AVQVG N SKPM G + Sbjct: 12 MTQIFTEDGTRVPVTVIQAGPCVVTQKKTASIDGYSAVQVGFDSTPAANASKPMLGHCTK 71 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 + L EF+ ++ +G V + FT G VDVTG +IGKGF G +KR+NF G Sbjct: 72 SGQGVFRYLREFKFDAASEM-NLGDVLTVEQFTAGDFVDVTGTSIGKGFQGVIKRYNFRG 130 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 RA+HG S HR+ GS G P RVFKNKKM G++G +VT++ L+V+ VD L+L+ Sbjct: 131 GRASHG-SRFHRAPGSIGASATPSRVFKNKKMPGQLGNTQVTMQCLQVIRVDADDNLLLI 189 Query: 192 KGCVPGAKKNSWILVRDSFKS 212 KG +PG +N+ +L+++S K+ Sbjct: 190 KGAIPG-HRNNIVLIKNSVKA 209 >gi|297564037|ref|YP_003683010.1| 50S ribosomal protein L3 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848486|gb|ADH70504.1| 50S ribosomal protein L3 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 216 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 97/210 (46%), Positives = 127/210 (60%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGMT V++ G+ +PVTVL C V RT D +GY A+Q+G G+ + V+ Sbjct: 7 KGVLGEKLGMTQVFDDAGKMVPVTVLKAGPCVVSRIRTPDTDGYSAIQLGYGQINPRKVN 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ + + +++P++ E R D +G + F GQ VDVTG + GKGF+G Sbjct: 67 KPLGDYLRAHDLTPRRHYVEVRTT-DATEYTLGQEVTADSFETGQKVDVTGKSKGKGFAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F GL A+HG HRS GS G PGRVFK +MAGRMG R TV+NL V SV Sbjct: 126 VMKRHGFRGLSASHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNVRKTVQNLTVHSV 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D ++GLILVKG VPG +LVR + K Sbjct: 186 DAEKGLILVKGAVPGPN-GGLVLVRTAVKG 214 >gi|146323695|ref|XP_752224.2| 50S ribosomal protein L3 [Aspergillus fumigatus Af293] gi|129557582|gb|EAL90186.2| 50S ribosomal protein L3 [Aspergillus fumigatus Af293] gi|159124862|gb|EDP49979.1| 50S ribosomal protein L3 [Aspergillus fumigatus A1163] Length = 317 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 102/215 (47%), Positives = 136/215 (63%), Gaps = 3/215 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GMT VY+ G+RI TVL LD QVV H+T +GY AVQVGAG Sbjct: 92 LRTGAIAIKKGMTAVYDAETGKRIACTVLQLDRVQVVSHKTRQTHGYNAVQVGAGWKHPS 151 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV+K + G FS+ VSPK+ ++EFRV+ + LLPVG + +F GQ VD + GKG Sbjct: 152 NVTKSLLGHFSTNGVSPKRHVYEFRVKDESGLLPVGQTINADWFQEGQYVDARSYSKGKG 211 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKRH F G +HGVS++HRS GS G Q G RV+ KKMAG MG + TV+NL+ Sbjct: 212 FAGVMKRHGFHGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLK 271 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V+ VD G+++V G V G K + ++D+ K Sbjct: 272 VLKVDADNGIVVVNGSVSGP-KGCVVRIQDAIKKP 305 >gi|325287048|ref|YP_004262838.1| 50S ribosomal protein L3 [Cellulophaga lytica DSM 7489] gi|324322502|gb|ADY29967.1| 50S ribosomal protein L3 [Cellulophaga lytica DSM 7489] Length = 205 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 89/206 (43%), Positives = 122/206 (59%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ RK+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G + K + Sbjct: 2 SGLIGRKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTEEVDGYNALQLGFDDKAEKRAN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F SPKKK+ EF+ + +G F G+ VDV G + GKGF G Sbjct: 62 KAQMGHFKKAGTSPKKKVVEFQ--DFEGEYKLGDTVGVDQFVEGEFVDVVGTSKGKGFQG 119 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG +ATHG R+ GS G P RVFK KMAGRMGG RVTV+NL V Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGRMGGERVTVQNLRVYK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L++VKGCVPG KN+++ ++ Sbjct: 180 VVPEKNLLVVKGCVPG-HKNAYVTIQ 204 >gi|238921442|ref|YP_002934957.1| hypothetical protein NT01EI_3594 [Edwardsiella ictaluri 93-146] gi|238871011|gb|ACR70722.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 199 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 90/201 (44%), Positives = 125/201 (62%), Gaps = 2/201 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++ +G IPVTV+ ++ +V + LD +GY A+QV G K V+KP G F+ Sbjct: 1 MTRIFTEDGVSIPVTVIEIEANRVTQVKDLDNDGYRAIQVTTGSKKANRVTKPEAGHFAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 V + L EFR+ + ++ +G S F + VDVTG++ GKGF+G +KR NF Sbjct: 61 AGVEAGRVLREFRLSEGEEFT-IGQNISVEIFADVKKVDVTGISKGKGFAGTVKRWNFRT 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD +R L+LV Sbjct: 120 QDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVDAERNLLLV 179 Query: 192 KGCVPGAKKNSWILVRDSFKS 212 KG VPGA I V+ + K+ Sbjct: 180 KGAVPGATGGDLI-VKPAVKA 199 >gi|296141115|ref|YP_003648358.1| 50S ribosomal protein L3 [Tsukamurella paurometabola DSM 20162] gi|296029249|gb|ADG80019.1| 50S ribosomal protein L3 [Tsukamurella paurometabola DSM 20162] Length = 218 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 88/214 (41%), Positives = 125/214 (58%), Gaps = 2/214 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ R +PVTV+ V RT +GY AVQ+ G + V+ Sbjct: 7 KGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQIRTEATDGYDAVQIAFGAIDPRKVN 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ V+P++ + E R+ D VG F+ G+ VDVTG++ GKG++G Sbjct: 67 KPVSGQFAKAGVTPRRHIAELRI-ADTSEYEVGQELGADVFSGGEFVDVTGISKGKGYAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F GL A+HG HR+ GS G PGRVFK +MAGRMG ++VT +NL V V Sbjct: 126 VMKRHGFAGLGASHGAQAVHRAPGSIGGCATPGRVFKGVRMAGRMGSDKVTTQNLTVFKV 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 D G++L+KG +PG +K ++VR + K Sbjct: 186 DADAGVLLIKGAIPG-RKGGLVMVRTAVKGGARA 218 >gi|186684510|ref|YP_001867706.1| 50S ribosomal protein L3 [Nostoc punctiforme PCC 73102] gi|226730541|sp|B2ITQ5|RL3_NOSP7 RecName: Full=50S ribosomal protein L3 gi|186466962|gb|ACC82763.1| ribosomal protein L3 [Nostoc punctiforme PCC 73102] Length = 210 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 82/210 (39%), Positives = 123/210 (58%), Gaps = 3/210 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT +++ G IPVTV+ C V +T +GY A+QVG GE K K Sbjct: 1 MSVGILGTKLGMTQIFDEAGVAIPVTVIQAGPCTVTQVKTKQTDGYFAIQVGFGEVKPKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P+ G + + + L E+ D +G F+ GQ+VDV G +IG+GF Sbjct: 61 LNRPLLGHLAKSSAPALRHLNEYHTDSSSD-YALGQQIKADIFSEGQIVDVVGTSIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KR+NFG +HG S +HR+ GS G PGRV+ K+MAGR+GG R+T++ L +V Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGKRITIRKLTIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 VD +R L+L+KG +PG + + V + Sbjct: 179 RVDAERNLLLIKGAIPGKP-GALVSVVPAK 207 >gi|163760799|ref|ZP_02167878.1| 50S ribosomal protein L3 [Hoeflea phototrophica DFL-43] gi|162281843|gb|EDQ32135.1| 50S ribosomal protein L3 [Hoeflea phototrophica DFL-43] Length = 223 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 136/209 (65%), Positives = 159/209 (76%), Gaps = 2/209 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT VYN G +PVTVL L+NCQVV RT +KNGY AVQ+GAG AKVKN SK MRG F+ Sbjct: 1 MTRVYNDAGEHVPVTVLRLENCQVVAQRTEEKNGYTAVQLGAGVAKVKNTSKAMRGNFAI 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 NV PK KL EFRV D +L+ VG+ S S+F GQLVDV+G+T GKGF+GAMKRH FGG Sbjct: 61 ANVEPKAKLVEFRVSSD-NLIDVGAEISASHFVAGQLVDVSGVTQGKGFAGAMKRHGFGG 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 LRATHGVS+SHRSHGSTG QDPG+V+K KKMAG MG RVT +NLE+VS D RGLIL+ Sbjct: 120 LRATHGVSVSHRSHGSTGSNQDPGKVWKGKKMAGHMGQTRVTTQNLEIVSTDADRGLILI 179 Query: 192 KGCVPGAKKNSWILVRDSFKSAVNCKGKV 220 KG VPG+ K SWI+VRD+ KS + + Sbjct: 180 KGAVPGS-KGSWIVVRDAIKSGIPADAPL 207 >gi|46199630|ref|YP_005297.1| 50S ribosomal protein L3 [Thermus thermophilus HB27] gi|55981661|ref|YP_144958.1| 50S ribosomal protein L3 [Thermus thermophilus HB8] gi|1710559|sp|P52860|RL3_THETH RecName: Full=50S ribosomal protein L3 gi|62287202|sp|Q5SHN8|RL3_THET8 RecName: Full=50S ribosomal protein L3 gi|81830573|sp|Q72I04|RL3_THET2 RecName: Full=50S ribosomal protein L3 gi|116668236|pdb|2J01|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 2 Of 4). This File Contains The 50s Subunit From Molecule I. gi|116668297|pdb|2J03|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 4 Of 4). This File Contains The 50s Subunit From Molecule Ii. gi|119389737|pdb|2HGJ|E Chain E, Crystal Structure Of The 70s Thermus Thermophilus Ribosome Showing How The 16s 3'-End Mimicks Mrna E And P Codons. This Entry 2hgj Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 2hgi. gi|119389794|pdb|2HGQ|E Chain E, Crystal Structure Of The 70s Thermus Thermophilus Ribosome With Translocated And Rotated Shine-Dalgarno Duplex. This Entry 2hgq Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 2hgp. gi|119389850|pdb|2HGU|E Chain E, 70s T.Th. Ribosome Functional Complex With Mrna And E- And P-Site Trnas At 4.5a. This Entry 2hgu Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 2hgr. gi|149240888|pdb|1VSA|C Chain C, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals Functional Interactions And Rearrangements. This File, 1vsa, Contains The 50s Ribosome Subunit. 30s Ribosome Subunit Is In The File 2ow8 gi|157836523|pdb|2V47|E Chain E, Structure Of The Ribosome Recycling Factor Bound To The Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And Trna-Fmet (Part 2 Of 4). This File Contains The 50s Subunit For Molecule 1. gi|157836579|pdb|2V49|E Chain E, Structure Of The Ribosome Recycling Factor Bound To The Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And Trna-Fmet (Part 4 Of 4). This File Contains The 50s Subunit Of Molecule 2. gi|160285430|pdb|1VSP|C Chain C, Interactions And Dynamics Of The Shine-Dalgarno Helix In The 70s Ribosome. This File, 1vsp, Contains The 50s Ribosome Subunit. 30s Ribosome Subunit Is In The File 2qnh gi|209156521|pdb|3D5B|E Chain E, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|209156575|pdb|3D5D|E Chain E, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|211938857|pdb|2JL6|E Chain E, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 2 Of 4). This File Contains The 50s Subunit. gi|211938915|pdb|2JL8|E Chain E, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 4 Of 4). This File Contains The 50s Subunit. gi|218766798|pdb|3F1F|E Chain E, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|218766854|pdb|3F1H|E Chain E, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|226887438|pdb|2WDI|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A-Site Trna, Deacylated P-Site Trna, And E-Site Trna. This File Contains The 50s Subunit For Molecule I. gi|226887470|pdb|2WDJ|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A-Site Trna, Deacylated P-Site Trna, And E-Site Trna. This File Contains The 50s Subunit For Molecule Ii. gi|226887527|pdb|2WDL|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A- And P-Site Trnas, And E-Site Trna. This File Contains The 50s Subunit For Molecule I. gi|226887584|pdb|2WDN|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A- And P-Site Trnas, And E-Site Trna. This File Contains The 50s Subunit For Molecule Ii. gi|237823568|pdb|2WH2|E Chain E, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome gi|237823627|pdb|2WH4|E Chain E, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome gi|260100014|pdb|3HUX|E Chain E, Structure Of Ef-P Bound To The 70s Ribosome; This File Contains The 50s Subunit For Molecule I. gi|260100070|pdb|3HUZ|E Chain E, Structure Of Ef-P Bound To The 70s Ribosome; This File Contains The 50s Subunit For Molecule Ii. gi|261824523|pdb|2WRJ|E Chain E, The Structure Of The Ribosome With Elongation Factor G Trapped In The Post-Translocational State (Part 2 Of 4). gi|261824585|pdb|2WRL|E Chain E, The Structure Of The Ribosome With Elongation Factor G Trapped In The Post-Translocational State. (Part 4 Of 4). gi|261824648|pdb|2WRO|E Chain E, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu And Trna (Part 2 Of 4). gi|261824707|pdb|2WRR|E Chain E, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu And Trna (Part 4 Of 4). gi|281307195|pdb|3KIR|E Chain E, Structure Of Rele Nuclease Bound To The 70s Ribosome (Precleavage State; Part 2 Of 4) gi|281307253|pdb|3KIT|E Chain E, Structure Of Rele Nuclease Bound To The 70s Ribosome (Precleavage State; Part 4 Of 4) gi|281307311|pdb|3KIW|E Chain E, Structure Of Rele Nuclease Bound To The 70s Ribosome (Postcleavage State; Part 2 Of 4) gi|281307369|pdb|3KIY|E Chain E, Structure Of Rele Nuclease Bound To The 70s Ribosome (Postcleavage State; Part 4 Of 4) gi|288965633|pdb|3KNI|E Chain E, The Structures Of Viomycin Bound To The 70s Ribosome. This File Contains The 50s Subunit For Molecule I gi|288965665|pdb|3KNK|E Chain E, The Structures Of Viomycin Bound To The 70s Ribosome. This File Contains The 50s Subunit For Molecule Ii. gi|288965697|pdb|3KNM|E Chain E, The Structures Of Capreomycin Bound To The 70s Ribosome. Thi Contains The 50s Subunit For Molecule I. gi|288965729|pdb|3KNO|E Chain E, The Structures Of Capreomycin Bound To The 70s Ribosome. Thi Contains The 50s Subunit For Molecule Ii gi|294979477|pdb|3I8F|E Chain E, Elongation Complex Of The 70s Ribosome With Three Trnas And Entry 3i8f Contains 50s Ribosomal Subunit. The 30s Ribosoma Can Be Found In Pdb Entry 3i8g. Molecule B In The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f (50s). gi|294979557|pdb|3I8I|E Chain E, Elongation Complex Of The 70s Ribosome With Three Trnas And Entry 3i8i Contains 50s Ribosomal Subnit. The 30s Ribosomal Can Be Found In Pdb Entry 3i8h. Molecule A In The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g (30s). gi|294979615|pdb|3I9C|E Chain E, Initiation Complex Of 70s Ribosome With Two Trnas And Mrna. 3i9c Contains 50s Ribosomal Subunit Of Molecule B. The 30s Subunit Can Be Found In Pdb Entry 3i9b. Molecule A In The S Asymmetric Unit Is Deposited As 3i9d (30s) And 3i9e (50s) gi|294979669|pdb|3I9E|E Chain E, Initiation Complex Of 70s Ribosome With Two Trnas And Mrna. 3i9e Contains 50s Ribosomal Subunit Of Molecule A. The 30s Subunit Can Be Found In Pdb Entry 3i9d. Molecule B In The S Asymmetric Unit Is Deposited As 3i9b (30s) And 3i9c (50s) gi|295982114|pdb|2X9S|E Chain E, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release gi|295982173|pdb|2X9U|E Chain E, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release gi|300508632|pdb|3MRZ|D Chain D, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3mrz Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 3ms0. Molecule A In The Same Asymmetric Unit Is Deposited As 3mr8 (50s) And 3ms1 (30s). gi|300508687|pdb|3MS1|D Chain D, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3ms1 Contains 50s Ribosomal Subunit. The 30s Ribosomal Subunit Can Be Found In Pdb Entry 3mr8. Molecule B In The Same Asymmetric Unit Is Deposited As 3mrz (50s) And 3ms0 (30s). gi|307568001|pdb|2XG0|E Chain E, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The 70s Ribosome (Part 2 Of 4) gi|307568059|pdb|2XG2|E Chain E, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The 70s Ribosome (Part 4 Of 4) gi|309320289|pdb|3OH5|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Chloramphenicol. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320319|pdb|3OH7|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Chloramphenicol. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320391|pdb|3OHJ|E Chain E, Structure Of The Thermus Thermophilus Ribosome Complexed With Erythromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320421|pdb|3OHK|E Chain E, Structure Of The Thermus Thermophilus Ribosome Complexed With Erythromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320472|pdb|3OHZ|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Azithromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320523|pdb|3OI1|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Azithromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320574|pdb|3OI3|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Telithromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320625|pdb|3OI5|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Telithromycin. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|312207713|pdb|2XQE|E Chain E, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s Ribosome With A Gtp Analog gi|313754037|pdb|2XTG|E Chain E, Trna Tranlocation On The 70s Ribosome: The Pre- Translocational Translocation Intermediate Ti(Pre) gi|313754095|pdb|2XUX|E Chain E, Trna Tranlocation On The 70s Ribosome: The Post- Translocational Translocation Intermediate Ti(Post) gi|325533442|pdb|2Y0V|E Chain E, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533501|pdb|2Y0X|E Chain E, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533560|pdb|2Y0Z|E Chain E, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533619|pdb|2Y11|E Chain E, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533678|pdb|2Y13|E Chain E, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533737|pdb|2Y15|E Chain E, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533796|pdb|2Y17|E Chain E, Ef-Tu Complex 3 gi|325533855|pdb|2Y19|E Chain E, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|1143612|emb|CAA86408.1| ribosomal protein L3 [Thermus thermophilus] gi|46197256|gb|AAS81670.1| LSU ribosomal protein L3P [Thermus thermophilus HB27] gi|55773074|dbj|BAD71515.1| 50S ribosomal protein L3 [Thermus thermophilus HB8] Length = 206 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 93/211 (44%), Positives = 125/211 (59%), Gaps = 7/211 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ K+GMT ++ + R +PVTV+ C VV RT +K+GY AVQ+G K V+ Sbjct: 2 KGILGVKVGMTRIFRDD-RAVPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLPQNPKRVN 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 +P++G F+ V P + L E R D P G + F G+ VDVTG + G+GF+G Sbjct: 61 RPLKGHFAKAGVEPVRILREIR-----DFNPEGDTVTVEIFKPGERVDVTGTSKGRGFAG 115 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKR NF G +HG HR GS G R+ PGRV+K KKMAG G RVTV NLEVV V Sbjct: 116 VMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGHYGAERVTVMNLEVVDV 175 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + L+LVKG VPG ++VR++ K+A Sbjct: 176 IPEENLLLVKGAVPGPN-GGLVIVRETKKAA 205 >gi|224283709|ref|ZP_03647031.1| Ribosomal protein L3 [Bifidobacterium bifidum NCIMB 41171] gi|310288024|ref|YP_003939283.1| 50S ribosomal protein L3 [Bifidobacterium bifidum S17] gi|311064897|ref|YP_003971623.1| 50S ribosomal protein L3 RplC [Bifidobacterium bifidum PRL2010] gi|313140865|ref|ZP_07803058.1| 50S ribosomal protein L3 [Bifidobacterium bifidum NCIMB 41171] gi|309251961|gb|ADO53709.1| 50S ribosomal protein L3 [Bifidobacterium bifidum S17] gi|310867217|gb|ADP36586.1| RplC 50S ribosomal protein L3 [Bifidobacterium bifidum PRL2010] gi|313133375|gb|EFR50992.1| 50S ribosomal protein L3 [Bifidobacterium bifidum NCIMB 41171] Length = 217 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 118/211 (55%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 ++ RKLGMT V++ G +PVT++ + V ++ + +GY A+Q+G G+ V+ Sbjct: 9 KALLGRKLGMTQVWDENGFFVPVTLVDVSTNVVTAVKSEETDGYKAIQIGYGQIDPTKVT 68 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ V+P++ L E R +D G S F G VDVTG T GKGF+G Sbjct: 69 KPLAGHFAKAGVTPRRHLVEVR-TEDAAEYEPGQELSIDAFAEGSEVDVTGTTKGKGFAG 127 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR F R THG + R GS G P R+ K K+MAGRMG TV++L V+S Sbjct: 128 TIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTATVQSLTVMSA 187 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + ++ +KG +PG K +LVR + K A Sbjct: 188 DAENNVLAIKGAIPGP-KGGIVLVRTAVKGA 217 >gi|156848338|ref|XP_001647051.1| hypothetical protein Kpol_1050p50 [Vanderwaltozyma polyspora DSM 70294] gi|156117734|gb|EDO19193.1| hypothetical protein Kpol_1050p50 [Vanderwaltozyma polyspora DSM 70294] Length = 271 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 103/216 (47%), Positives = 143/216 (66%), Gaps = 2/216 (0%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R GV+A+K GM ++ G R TVL L+N +V++HRTL NGY A QVG G+ Sbjct: 54 LRCGVIAQKKGMMPYFDENTGERTAATVLQLNNVEVLMHRTLKDNGYYACQVGFGDKDPS 113 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +VS+ M G F+S V+PK+ + EFRV+ + LLP+G++ PS+F GQ VD+ + GKG Sbjct: 114 HVSRQMLGHFASKIVNPKETVAEFRVKNESGLLPLGTLLKPSFFKPGQFVDLKSTSKGKG 173 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR +F GLRA+HG S+ HR GS G QDPGR+ KKM GRMGG VT++N+++ Sbjct: 174 FQGVMKRFHFAGLRASHGTSVMHRHGGSFGQNQDPGRILPGKKMPGRMGGKNVTIQNVQI 233 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 + VDD+ +I+VKG V G K S+I ++DS K Sbjct: 234 LKVDDENNVIIVKGSVAGP-KGSYIKLQDSIKKPPK 268 >gi|269219006|ref|ZP_06162860.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 848 str. F0332] gi|269212117|gb|EEZ78457.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 848 str. F0332] Length = 221 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 93/211 (44%), Positives = 130/211 (61%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 ++ KLGMT +++ GR +P+TV+ + V RT + +GY AVQ+ +GE K KNV+ Sbjct: 13 KALLGTKLGMTQLWDEAGRVVPITVVRVGTNVVTQIRTPETDGYSAVQLASGELKTKNVT 72 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F V+P++KL E R D +G + F GQ VDV G + GKGF+G Sbjct: 73 KPLQGHFDKAGVAPRRKLAEIRTS-DAAEYELGQELTADLFEAGQKVDVIGTSKGKGFAG 131 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G P RVF+ +MAGRMG +RVTV NL V +V Sbjct: 132 VMKRHGFSGVSASHGAHRNHRKPGSIGACATPSRVFRGLRMAGRMGKDRVTVLNLPVHAV 191 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++G+IL+ G VPG K ++VR + K A Sbjct: 192 DVEKGIILLAGAVPG-NKGGTVVVRTAVKGA 221 >gi|89893217|ref|YP_516704.1| 50S ribosomal protein L3 [Desulfitobacterium hafniense Y51] gi|123397902|sp|Q250N2|RL3_DESHY RecName: Full=50S ribosomal protein L3 gi|89332665|dbj|BAE82260.1| 50S ribosomal protein L3 [Desulfitobacterium hafniense Y51] Length = 212 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 129/212 (60%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 + G++ +K+GMT V+ EG IPVTV+ C V+ +T +GY A+QVG G + + Sbjct: 4 VSKGILGKKVGMTQVFTEEGHLIPVTVVEAGPCYVIQKKTKATDGYNAIQVGFGALRERL 63 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +V P + + EFRV D + +G V + F G VDV G++ GKGF Sbjct: 64 ANKPQKGHVAKASVKPMRYIREFRVD-DVEAYEIGQVITAELFAAGDAVDVVGISKGKGF 122 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH HG S HR GS G + P RVFK + + GRMGG RVTV+NL+VV Sbjct: 123 AGMIKRHGASRGPMKHG-SKYHRRTGSLGAKG-PARVFKGRNLPGRMGGERVTVQNLKVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + +ILVKG VPGAKK S ++++ S K+ Sbjct: 181 RVDADKNMILVKGAVPGAKK-SLLILKPSVKA 211 >gi|154498883|ref|ZP_02037261.1| hypothetical protein BACCAP_02875 [Bacteroides capillosus ATCC 29799] gi|150271723|gb|EDM98949.1| hypothetical protein BACCAP_02875 [Bacteroides capillosus ATCC 29799] Length = 240 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 81/210 (38%), Positives = 119/210 (56%), Gaps = 2/210 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ +K+GMT +++ G+ IPVTV+ C V +T++K+GY AVQ+G + + Sbjct: 1 MEKAIIGKKVGMTQIFDEAGKVIPVTVIEAGPCVVTQKKTVEKDGYTAVQLGFEDVPERK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP G VS K+ L EF + + + L +G F G VDVTG++ GKG+ Sbjct: 61 LTKPELGHLKKAGVSAKRVLKEFAL-NNAESLNIGDEVKADAFAAGDRVDVTGISKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH L+ +HG HR GS DP R+FK K AG+MG +VTV NL+VV Sbjct: 120 AGVIKRHGAHRLKESHGTGPVHRHAGSMSANSDPSRIFKGKIGAGQMGNEQVTVLNLDVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 VD + LI V G +PG K + +R S Sbjct: 180 KVDPELNLIAVCGAIPGP-KGGIVCLRSSV 208 >gi|119718125|ref|YP_925090.1| 50S ribosomal protein L3P [Nocardioides sp. JS614] gi|166990937|sp|A1SNL8|RL3_NOCSJ RecName: Full=50S ribosomal protein L3 gi|119538786|gb|ABL83403.1| LSU ribosomal protein L3P [Nocardioides sp. JS614] Length = 223 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 92/218 (42%), Positives = 127/218 (58%), Gaps = 2/218 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ R +PVTV+ V RT +GY A+QVG GE + V+ Sbjct: 8 KGLLGTKLGMTQVWDENNRVVPVTVIAAGTNVVTQVRTPATDGYNAIQVGYGEIDGRKVT 67 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F +P++ L E R D VG + F G+ +DVTG + GKGF+G Sbjct: 68 KPQAGHFGKAGTTPRRHLVEIRTALAAD-YTVGQELAVDTFAAGEEIDVTGTSKGKGFAG 126 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G PGRVFK +MAGRMG + VT +N+ V +V Sbjct: 127 TMKRHGFAGVSASHGAHRNHRKPGSIGACATPGRVFKGVRMAGRMGTDTVTTQNVTVHAV 186 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220 D +GLIL+KG VPG K +++R + KS++ +V Sbjct: 187 DTAKGLILLKGAVPGP-KGGLVVLRSAAKSSLTSGKEV 223 >gi|303233143|ref|ZP_07319816.1| 50S ribosomal protein L3 [Atopobium vaginae PB189-T1-4] gi|302480728|gb|EFL43815.1| 50S ribosomal protein L3 [Atopobium vaginae PB189-T1-4] Length = 221 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 87/209 (41%), Positives = 123/209 (58%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M + ++ RK+GMT V++ +PVTV+ C V +T +GY A+Q+G GE K+ Sbjct: 16 MVTTILGRKIGMTQVWDENDNVVPVTVIQAGPCVVSQVKTKSSDGYDAIQIGFGEVSSKH 75 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM G F + NV P + L E RV+ ++ G + F VDVTG++ GKGF Sbjct: 76 VNKPMEGHFKAHNVEPLRHLCEVRVENGEEH-ACGDTITVKDFADATAVDVTGVSKGKGF 134 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF HG S + R GS G PGRV K MAG MG R+TVKNL++V Sbjct: 135 QGTIKRWNFSSGPKAHG-SRNQREPGSIGQCAYPGRVRKGLHMAGHMGDERITVKNLKLV 193 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +D+++ L+LVKG VPG KN+ + +R + Sbjct: 194 RIDEEQNLLLVKGAVPGG-KNALLTIRMA 221 >gi|237743899|ref|ZP_04574380.1| LSU ribosomal protein L3P [Fusobacterium sp. 7_1] gi|229432930|gb|EEO43142.1| LSU ribosomal protein L3P [Fusobacterium sp. 7_1] Length = 211 Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT ++ +G+ IPVTV+ V+ +T +K+GY+A+Q+G E K KN + Sbjct: 2 SGILGKKIGMTQIF-EDGKFIPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ V P++ + E V+ D +G VD+TG + GKG SG Sbjct: 61 KPLMGIFNKAGVKPQRFVKELAVESVDG-YELGQEIKVDVLAEVGYVDITGTSKGKGTSG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGG RA+HGVS +HR GS G PG+V K K+MAG+ G VTV+NL+VV V Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D + L+L+KG VPGA KNS+++++ + K + Sbjct: 180 DAEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210 >gi|228472276|ref|ZP_04057042.1| 50S ribosomal protein L3 [Capnocytophaga gingivalis ATCC 33624] gi|228276479|gb|EEK15203.1| 50S ribosomal protein L3 [Capnocytophaga gingivalis ATCC 33624] Length = 205 Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats. Identities = 86/205 (41%), Positives = 129/205 (62%), Gaps = 4/205 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP T++ C V RT + +GY A+Q+G + K K+ S Sbjct: 2 SGLIGKKVGMTSIFDENGKNIPCTIIEAGPCVVTQVRTKEVDGYEALQLGFDDKKEKHTS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F+ V+PKKKL EF+ + +G + +F G+ VDVTG + GKGF G Sbjct: 62 KAAAGHFAKAGVTPKKKLVEFQGFE--STYKLGDTITAEFFVEGEFVDVTGTSKGKGFQG 119 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 ++RH FGG ++THG R+ GS G P RVFK +MAGRMG +VTV+NL+V+ Sbjct: 120 VVRRHGFGGVGQSTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 V ++ LI++KGCVPG KN+++ + Sbjct: 180 VIPEKNLIILKGCVPG-HKNAYVTI 203 >gi|269796255|ref|YP_003315710.1| 50S ribosomal protein L3P [Sanguibacter keddieii DSM 10542] gi|269098440|gb|ACZ22876.1| LSU ribosomal protein L3P [Sanguibacter keddieii DSM 10542] Length = 219 Score = 250 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 92/211 (43%), Positives = 127/211 (60%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 + V+ KLGMT V++ GR +PVTV+ + V RT + +GY AVQ+ G+ + VS Sbjct: 11 TAVLGTKLGMTQVWDEAGRLVPVTVVQVGTNVVTQVRTAELDGYAAVQLAYGQIDPRKVS 70 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 +P++G F V+P++ + E R D +G + F G +VDV G T GKGF+G Sbjct: 71 QPLKGHFEKAGVTPRRHVTEIRTS-DAGEFTLGQELTAEAFASGSVVDVIGTTKGKGFAG 129 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G P RVFK +MAGRMG +R T +NL V +V Sbjct: 130 VMKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGVRMAGRMGVDRQTTQNLTVHAV 189 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+LVKG VPG K +LVR + K A Sbjct: 190 DAEKGLLLVKGAVPGP-KGGVVLVRSAAKGA 219 >gi|119501322|ref|XP_001267418.1| 50S ribosomal protein L3 [Neosartorya fischeri NRRL 181] gi|119415583|gb|EAW25521.1| 50S ribosomal protein L3 [Neosartorya fischeri NRRL 181] Length = 297 Score = 250 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 102/215 (47%), Positives = 137/215 (63%), Gaps = 3/215 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GMT VY+ G+RI TVL LD QVV H+T +GY AVQVGAG Sbjct: 72 LRTGAIAIKKGMTAVYDAETGKRIACTVLQLDRVQVVSHKTRQTHGYNAVQVGAGWKHPS 131 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV+K + G FS+ VSPK+ ++EFRV+ + LLPVG + +F GQ VD + GKG Sbjct: 132 NVTKSLLGHFSTNGVSPKRHIYEFRVKDESGLLPVGQTINADWFQEGQYVDARSNSKGKG 191 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKRH F G +HGVS++HRS GS G Q G RV+ KKMAG MG + TV+NL+ Sbjct: 192 FAGVMKRHGFHGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLK 251 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V+ VD + G+++V G V G K + ++D+ K Sbjct: 252 VLKVDAENGIVVVNGSVSGP-KGCVVRIQDAIKKP 285 >gi|163791666|ref|ZP_02186061.1| 50S ribosomal protein L3 [Carnobacterium sp. AT7] gi|159873045|gb|EDP67154.1| 50S ribosomal protein L3 [Carnobacterium sp. AT7] Length = 210 Score = 250 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 91/213 (42%), Positives = 126/213 (59%), Gaps = 4/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ G IPVTV+ V+ +T++ +GY AVQ+G E + Sbjct: 1 MTKGILGKKVGMTQVFTESGELIPVTVIEATPNVVLQVKTMETDGYEAVQLGYQEKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G + N +PK+ + EF VG F VG +V+VTG T GKGF Sbjct: 61 SNKPAMGHVAKANATPKRFIREFN-DVVLGEYEVGQEVKVDTFAVGDIVNVTGTTKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH +HG S HR GS G DP RVFK + GRMGGNRVT+KNLE+V Sbjct: 120 QGVIKRHGHSRGPMSHG-SRHHRRPGSMGPV-DPNRVFKRTLLPGRMGGNRVTIKNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 SVD ++ ++L+KG VPG+KK S I ++ +F+ A Sbjct: 178 SVDVEKNVLLIKGNVPGSKK-SLIQIKSAFQKA 209 >gi|70725803|ref|YP_252717.1| 50S ribosomal protein L3 [Staphylococcus haemolyticus JCSC1435] gi|82581592|sp|Q4L8B4|RL3_STAHJ RecName: Full=50S ribosomal protein L3 gi|68446527|dbj|BAE04111.1| 50S ribosomal protein L3 [Staphylococcus haemolyticus JCSC1435] Length = 220 Score = 250 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 91/221 (41%), Positives = 120/221 (54%), Gaps = 11/221 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKKAYK 60 Query: 54 -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 K +KP G +PK+ + EFR D+ VG + F G ++DVT Sbjct: 61 KDAKSNKYANKPAEGHAKKAGAAPKRFIREFRNVNVDE-YEVGQEVTVDTFEAGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G + GKGF GA+KRH HG HR+ GS G D RVFK +KM GRMGGN V Sbjct: 120 GTSKGKGFQGAIKRHGQARGPMAHGSH-FHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 TV+NLEVV VD + +ILVKG VPG KK ++ ++ S K Sbjct: 179 TVQNLEVVQVDTENNVILVKGNVPGPKKG-FVEIQTSIKKG 218 >gi|124026708|ref|YP_001015823.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. NATL1A] gi|166233176|sp|A2C4Z9|RL3_PROM1 RecName: Full=50S ribosomal protein L3 gi|123961776|gb|ABM76559.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. NATL1A] Length = 218 Score = 250 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 79/217 (36%), Positives = 129/217 (59%), Gaps = 3/217 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +GR +PVT++ C++ ++ D +GY AVQ+G + K Sbjct: 1 MSLGILGKKLGMSQLFDDQGRAVPVTLIEAGPCRITQLKSADTDGYAAVQIGFQLIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + + L E+RV+ + +G+ + F GQ VDV+G T+G+GF Sbjct: 61 INKPSKGHLAKSGNDLLRHLREYRVENSSE-FELGASITVDDFEKGQKVDVSGDTMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F +HG S +HR GS G PGRV+ K+MAGRMGG +VT + LE++ Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHRLPGSIGAGTTPGRVYPGKRMAGRMGGKKVTTRALEIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 +D L++VKG VPG S + +R + + V+ + Sbjct: 179 KIDTNHNLLVVKGSVPGKP-GSLLNIRPAKRVGVSIQ 214 >gi|303287272|ref|XP_003062925.1| predicted protein [Micromonas pusilla CCMP1545] gi|226455561|gb|EEH52864.1| predicted protein [Micromonas pusilla CCMP1545] Length = 221 Score = 250 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 104/212 (49%), Positives = 138/212 (65%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G +A K+GMT +N G R+P+TVL +D C+VV +T +K GY A+Q+GAG K K + Sbjct: 5 RVGALAVKVGMTQEWNEHGARVPLTVLWIDECEVVQAKTPEKEGYAALQMGAGSKKRKQI 64 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 + G F++ V K++L EFRV D +LPVG+V S+F GQ VD+ G TIGKGF Sbjct: 65 TGAEYGHFAARGVQIKRELSEFRVTPD-AILPVGTVVDASHFLAGQYVDIQGKTIGKGFQ 123 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR F GL A+HG + HR+HGS G QDPGRV+K KKMAG+MG TV+N V Sbjct: 124 GPMKRWGFAGLPASHGTTKKHRAHGSIGNSQDPGRVWKGKKMAGQMGNRTRTVQNCFVYR 183 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD +R LI V G VPG + N ++ V+D+ + Sbjct: 184 VDPERNLIYVVGQVPGKRGN-FVRVKDALRKG 214 >gi|302669961|ref|YP_003829921.1| ribosomal protein L3 RplC [Butyrivibrio proteoclasticus B316] gi|302394434|gb|ADL33339.1| ribosomal protein L3 RplC [Butyrivibrio proteoclasticus B316] Length = 227 Score = 250 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 86/227 (37%), Positives = 123/227 (54%), Gaps = 19/227 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT ++ +G +PVTVL C V +T++ +GY AVQVG + K K Sbjct: 1 MKKAILATKVGMTQIFKEDGSLVPVTVLQAGPCVVTQIKTVENDGYSAVQVGFVDKKEKV 60 Query: 61 VSK----------------PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V+K +G F VS K+ + EF+++ D +G+ F Sbjct: 61 VNKDKNGNKTIYHRHGATKAEQGHFKKAGVSCKRYVREFKLENAAD-YALGAEIKADVFA 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G +D T ++ GKGF GA+K++ HG S HR GS G DP RVFK K M Sbjct: 120 EGDKIDATAISKGKGFQGAIKKNGQHRGPMAHG-SKFHRHQGSNGSSSDPSRVFKGKGMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 G MG +VTV+NLEVV VD + LILVKG +PG KK + ++++ K Sbjct: 179 GHMGSVKVTVQNLEVVRVDADKNLILVKGAIPGPKKG-LVTIKETVK 224 >gi|257069508|ref|YP_003155763.1| 50S ribosomal protein L3P [Brachybacterium faecium DSM 4810] gi|256560326|gb|ACU86173.1| LSU ribosomal protein L3P [Brachybacterium faecium DSM 4810] Length = 226 Score = 250 bits (640), Expect = 9e-65, Method: Composition-based stats. Identities = 96/213 (45%), Positives = 132/213 (61%), Gaps = 2/213 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SGV+ KLGMT V++ G+ +PVTV+ V R+++ +GY AVQ+ G+ + VS Sbjct: 14 SGVLGTKLGMTQVWDENGKLVPVTVVQTGANVVTQIRSVETDGYDAVQIAFGQIDPRKVS 73 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 +P+RG F V+P++ L E R + +G S F GQ VDV G + GKG +G Sbjct: 74 QPLRGHFEKAGVTPRRHLVELRTVNAAE-YTLGQEIDASVFEAGQKVDVVGTSKGKGTAG 132 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G PGRVFK ++MAGRMGG+R +V+NL V +V Sbjct: 133 VMKRHGFAGVGASHGQHRNHRKPGSIGGASTPGRVFKGQRMAGRMGGDRTSVQNLTVHAV 192 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D ++GL+LVKG VPGA K +LVR + KS Sbjct: 193 DVEKGLVLVKGAVPGA-KGGLVLVRSAVKSPAK 224 >gi|30248418|ref|NP_840488.1| ribosomal protein L3 [Nitrosomonas europaea ATCC 19718] gi|42559613|sp|Q82X88|RL3_NITEU RecName: Full=50S ribosomal protein L3 gi|30138304|emb|CAD84312.1| Ribosomal protein L3 [Nitrosomonas europaea ATCC 19718] Length = 215 Score = 250 bits (640), Expect = 9e-65, Method: Composition-based stats. Identities = 96/216 (44%), Positives = 130/216 (60%), Gaps = 2/216 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +K+GMT V+ G IPVTVL + +VV +T +K+GY AVQ+ G + Sbjct: 1 MKLGLIGKKIGMTRVFTESGNSIPVTVLDVSGNRVVQVKTEEKDGYSAVQLTQGYRRKNR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++K + G FS V + EFRV D + +GS S F VG VDV G++IGKG Sbjct: 61 ITKALSGHFSQAGVEAGTVIKEFRVDHDIGSDIKIGSEISVELFEVGSKVDVCGISIGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KRHNF RA+HG S SH GS G QDPGRVF KKM G +G + TV+N+EV Sbjct: 121 YAGTIKRHNFSSSRASHGNSRSHNVPGSIGMAQDPGRVFPGKKMTGHLGNAQCTVQNIEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 V VD RGL+ +KG VPG+K N + +R K Sbjct: 181 VRVDAGRGLLFLKGSVPGSKGNG-VFIRPGVKQPSK 215 >gi|225011647|ref|ZP_03702085.1| ribosomal protein L3 [Flavobacteria bacterium MS024-2A] gi|225004150|gb|EEG42122.1| ribosomal protein L3 [Flavobacteria bacterium MS024-2A] Length = 205 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 89/206 (43%), Positives = 128/206 (62%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ +G+ IP TVL L C V RT +GY A+Q+G + K V+ Sbjct: 2 SGLIGKKIGMTSLFDEKGKNIPCTVLELGPCVVTQVRTTAVDGYEALQLGFDDKAEKKVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F N PKKKL EF+ ++ L +G + +F G+ VDV+G + GKGF G Sbjct: 62 KAAAGHFKKANSVPKKKLVEFQ--NFEEELNLGDTITVEHFNEGEFVDVSGTSKGKGFQG 119 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH F G +ATHG R+ GS G P RVFK +MAG+MG +V V+NL VV Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGQMGNVKVKVQNLRVVK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L++VKGCVPG KN++++V+ Sbjct: 180 VVPEKNLLVVKGCVPG-HKNAYVIVQ 204 >gi|282899952|ref|ZP_06307913.1| Ribosomal protein L3 [Cylindrospermopsis raciborskii CS-505] gi|281195222|gb|EFA70158.1| Ribosomal protein L3 [Cylindrospermopsis raciborskii CS-505] Length = 212 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 91/211 (43%), Positives = 126/211 (59%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT +++ G IPVTV+ C V +T +GY A+QVG GE K K Sbjct: 1 MSVGILGTKLGMTQIFDEAGVSIPVTVIQAGPCTVTQVKTQPTDGYCAIQVGYGEVKPKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP G + + P + L E+R D +G F+VGQ+VDV G +IG+GF Sbjct: 61 LNKPKLGHLAKSSAGPVRYLNEYRTDAAGD-YALGQEIKADIFSVGQIVDVIGTSIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KR+NFG +HG S +HR+ GS G PGRV+ K+MAGR+GG+RVTV+ L VV Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGSRVTVRKLTVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R LIL+KG +PG + V + K Sbjct: 179 KVDAERNLILIKGAIPGKP-GGLVNVVPTTK 208 >gi|73661972|ref|YP_300753.1| 50S ribosomal protein L3 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|82581593|sp|Q49ZG8|RL3_STAS1 RecName: Full=50S ribosomal protein L3 gi|72494487|dbj|BAE17808.1| 50S ribosomal protein L3 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 219 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 89/220 (40%), Positives = 124/220 (56%), Gaps = 11/220 (5%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ ++ ++ + +GY A+QVG + + Sbjct: 1 MTKGILGRKIGMTQVFGENGDLIPVTVVEASQNVILQKKSEEIDGYNAIQVGYEDKQAYK 60 Query: 61 V--------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 +KP G +PK+ + EFR D+ VG S + F G ++DVT Sbjct: 61 KDSRSSKYANKPAEGHAKKAGTAPKRFIREFRNVNVDE-YEVGQEVSVNTFEAGDVIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRHN +HG HR+ GS G D RVFK +KM GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHNQARGPMSHGSH-FHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 TV+NLEVV +D + +ILVKG VPG KK ++ + S K Sbjct: 179 TVQNLEVVQIDAENNVILVKGNVPGPKKG-FVEITSSIKG 217 >gi|72382967|ref|YP_292322.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. NATL2A] gi|109893537|sp|Q46IQ9|RL3_PROMT RecName: Full=50S ribosomal protein L3 gi|72002817|gb|AAZ58619.1| LSU ribosomal protein L3P [Prochlorococcus marinus str. NATL2A] Length = 218 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 77/217 (35%), Positives = 127/217 (58%), Gaps = 3/217 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +GR +PVT++ C++ ++ D +GY AVQ+G + K Sbjct: 1 MSLGILGKKLGMSQLFDDQGRAVPVTLIEAGPCRITQLKSADTDGYAAVQIGFQLIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + + L E+RV+ + +G+ + F GQ VD++G T+G+GF Sbjct: 61 INKPSKGHLAKSGNDLLRHLREYRVENSSE-FELGASITVDDFEKGQKVDISGDTMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F +HG S +HR GS G PGRV+ K+MAGRMGG +VT + LE++ Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHRLPGSIGAGTTPGRVYPGKRMAGRMGGKKVTTRALEIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 +D L++VKG VPG S + +R + + + Sbjct: 179 KIDTNHNLLVVKGSVPGKP-GSLLNIRPAKRVGAPTQ 214 >gi|305665137|ref|YP_003861424.1| 50S ribosomal protein L3 [Maribacter sp. HTCC2170] gi|88709889|gb|EAR02121.1| 50S ribosomal protein L3 [Maribacter sp. HTCC2170] Length = 207 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 83/206 (40%), Positives = 123/206 (59%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ +P TV+ C V RT + +GY A+Q+G + K + Sbjct: 2 SGLIGKKVGMTSIFDENGKNVPCTVIEAGPCVVTQVRTEEVDGYSALQLGFDDKAEKRAN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F SPKKK+ EF+ + + +G F G+ VDV G + GKGF G Sbjct: 62 KAESGHFKKAGASPKKKVVEFQGFEGE--YKLGDTIGVDVFVEGEFVDVVGTSKGKGFQG 119 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH F G +ATHG R+ GS G P RVFK +MAGRMGG+R TV+NL V+ Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGDRTTVQNLRVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 + ++ L++VKGCVPG KN+++ ++ Sbjct: 180 IVPEKNLLVVKGCVPG-HKNAYVTIK 204 >gi|154494380|ref|ZP_02033700.1| hypothetical protein PARMER_03735 [Parabacteroides merdae ATCC 43184] gi|218262297|ref|ZP_03476811.1| hypothetical protein PRABACTJOHN_02485 [Parabacteroides johnsonii DSM 18315] gi|154085824|gb|EDN84869.1| hypothetical protein PARMER_03735 [Parabacteroides merdae ATCC 43184] gi|218223448|gb|EEC96098.1| hypothetical protein PRABACTJOHN_02485 [Parabacteroides johnsonii DSM 18315] Length = 205 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 87/204 (42%), Positives = 124/204 (60%), Gaps = 4/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EG+ +P TV+ + C V +TL+K+GY AVQ+G E K K+ ++ Sbjct: 3 GLLGKKIGMTSVFSAEGKNLPCTVIEVGPCVVTQIKTLEKDGYEAVQLGFEEKKEKHTTQ 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+PK+ L EF+ + +G V + Y VDV G + GKGF G Sbjct: 63 PEMGHFKKAGVTPKRYLAEFK--NFETEYKLGDVITVDYLEDAGFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG + THG R+ G G P +VFK +MAG+MG RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRLRAPGGIGACSYPAKVFKGMRMAGQMGNERVTVQNLQVIKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 + L+LVKG VPGA K S +L+ Sbjct: 181 MPEHNLLLVKGSVPGA-KGSILLI 203 >gi|294786411|ref|ZP_06751665.1| 50S ribosomal protein L3 [Parascardovia denticolens F0305] gi|315225973|ref|ZP_07867761.1| 50S ribosomal protein L3 [Parascardovia denticolens DSM 10105] gi|294485244|gb|EFG32878.1| 50S ribosomal protein L3 [Parascardovia denticolens F0305] gi|315120105|gb|EFT83237.1| 50S ribosomal protein L3 [Parascardovia denticolens DSM 10105] Length = 217 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 85/212 (40%), Positives = 121/212 (57%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+ +V +KLGM+ +++ G +PVT++ + V ++ D++GY AVQ+G G V Sbjct: 7 RTALVGKKLGMSQIWDENGFFVPVTLVDVSTNVVTAVKSEDRDGYKAVQLGYGAIDPTKV 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G F+ V+P++ L E R + P G + F+ G VDVTG T GKGF+ Sbjct: 67 TKPLAGHFAKAGVTPRRHLVEVRTEDAGSYQP-GQELAADTFSDGDQVDVTGTTKGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F R THG + R GS G P RV K K+MAGRMG T + L VVS Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSIGACATPSRVLKGKRMAGRMGHVTHTTQGLTVVS 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + GLI +KG +PG K + +LVR + K A Sbjct: 186 ADVENGLIAIKGAIPGP-KGAIVLVRSAVKGA 216 >gi|256027490|ref|ZP_05441324.1| 50S ribosomal protein L3P [Fusobacterium sp. D11] gi|260495203|ref|ZP_05815331.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_33] gi|289765452|ref|ZP_06524830.1| LSU ribosomal protein L3P [Fusobacterium sp. D11] gi|260197260|gb|EEW94779.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_33] gi|289717007|gb|EFD81019.1| LSU ribosomal protein L3P [Fusobacterium sp. D11] Length = 211 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 90/212 (42%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT ++ +G+ +PVTV+ V+ +T +K+GY+A+Q+G E K KN + Sbjct: 2 SGILGKKIGMTQIF-EDGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ V P++ + E V+ D +G VD+TG + GKG SG Sbjct: 61 KPLMGIFNKAGVKPQRFVKELAVESVDG-YELGQEIKVDVLAEVGYVDITGTSKGKGTSG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGG RA+HGVS +HR GS G PG+V K K+MAG+ G VTV+NL+VV V Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D + L+L+KG VPGA KNS+++++ + K + Sbjct: 180 DAEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210 >gi|322812575|pdb|3PYO|D Chain D, Crystal Structure Of A Complex Containing Domain 3 From The Psiv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 50s Subunit Of The First 70s Ribosome. gi|322812628|pdb|3PYR|D Chain D, Crystal Structure Of A Complex Containing Domain 3 From The Psiv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 50s Subunit Of The Second 70s Ribosome. gi|322812681|pdb|3PYT|D Chain D, Crystal Structure Of A Complex Containing Domain 3 Of Crpv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 50s Subunit Of The First 70s Ribosome. gi|322812734|pdb|3PYV|D Chain D, Crystal Structure Of A Complex Containing Domain 3 Of Crpv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 50s Subunit Of The Second 70s Ribosome Length = 204 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 92/210 (43%), Positives = 124/210 (59%), Gaps = 7/210 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ K+GMT ++ + R +PVTV+ C VV RT +K+GY AVQ+G K V+ Sbjct: 2 KGILGVKVGMTRIFRDD-RAVPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLPQNPKRVN 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 +P++G F+ V P + L E R D P G + F G+ VDVTG + G+GF+G Sbjct: 61 RPLKGHFAKAGVEPVRILREIR-----DFNPEGDTVTVEIFKPGERVDVTGTSKGRGFAG 115 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKR NF G +HG HR GS G R+ PGRV+K KKMAG G RVTV NLEVV V Sbjct: 116 VMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGHYGAERVTVMNLEVVDV 175 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + L+LVKG VPG ++VR++ K+ Sbjct: 176 IPEENLLLVKGAVPGPN-GGLVIVRETKKA 204 >gi|87300913|ref|ZP_01083755.1| 50S ribosomal protein L3 [Synechococcus sp. WH 5701] gi|87284784|gb|EAQ76736.1| 50S ribosomal protein L3 [Synechococcus sp. WH 5701] Length = 215 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 82/216 (37%), Positives = 125/216 (57%), Gaps = 3/216 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ G+ IPVTV+ C++ +T +GY A Q+G GE + K Sbjct: 1 MSFGILGKKLGMSQFFDPNGKSIPVTVIEAGPCRITQLKTPATDGYSAAQIGFGETRDKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP G + + L E+R++ D L +G+ + F GQ VDV+G T+G+GF Sbjct: 61 VNKPAAGHLAKSGDELLRHLQEYRLESLDG-LELGASITVEAFEAGQKVDVSGDTVGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRH F +HG S +HR GSTG PGRV+ K+MAGR GG ++T + L ++ Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHREPGSTGAGTTPGRVYPGKRMAGRYGGKQITTRGLTIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 VD +R L++VKG VPG + + +R + + Sbjct: 179 KVDHERNLLVVKGSVPGKP-GALLSIRPALRVGAKA 213 >gi|120609041|ref|YP_968719.1| 50S ribosomal protein L3 [Acidovorax citrulli AAC00-1] gi|326315224|ref|YP_004232896.1| 50S ribosomal protein L3 [Acidovorax avenae subsp. avenae ATCC 19860] gi|166233109|sp|A1TJ07|RL3_ACIAC RecName: Full=50S ribosomal protein L3 gi|120587505|gb|ABM30945.1| LSU ribosomal protein L3P [Acidovorax citrulli AAC00-1] gi|323372060|gb|ADX44329.1| 50S ribosomal protein L3 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 224 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 85/214 (39%), Positives = 127/214 (59%), Gaps = 3/214 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G +PVTV+ + N +V +T + +GY+A+QV G K V+K Sbjct: 8 GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVALQVTFGSRKASRVTK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121 P G + V + + EFRV + G+ F+VGQ VDV G +IGKG++ Sbjct: 68 PEAGHLAKAGVEAGEIIREFRVTAETAGKYATGAAVPVADVFSVGQKVDVQGTSIGKGYA 127 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHN RA+HG S SH GS G QDPGRVF K+M G +G T +NL+V+ Sbjct: 128 GTIKRHNMASQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDATTTTQNLDVIR 187 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 VD+ R L+L+KG +PG+ K ++ VR + K+ + Sbjct: 188 VDEARQLLLIKGAIPGS-KGGFVTVRPAVKAKAS 220 >gi|320160414|ref|YP_004173638.1| 50S ribosomal protein L3 [Anaerolinea thermophila UNI-1] gi|319994267|dbj|BAJ63038.1| 50S ribosomal protein L3 [Anaerolinea thermophila UNI-1] Length = 209 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 86/211 (40%), Positives = 123/211 (58%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT +++ G IPVTV+ C V RT + +GY AVQ+G E K K Sbjct: 1 MLKGLIGKKIGMTQIFDENGVAIPVTVIEAGPCYVTQVRTPENDGYSAVQLGFEEVKPKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++ G N+ P + L EFRV+ + + G + F VG+ VDV G + GKGF Sbjct: 61 LTGGELGHLKRNNLPPLRFLREFRVKNPE--VKEGDKVTVECFAVGERVDVVGTSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR++F G THG S HR+ GS PGRV+K + G MG +RVT + L+VV Sbjct: 119 QGGVKRYHFRGGPKTHGQSDRHRAPGSRSSGTTPGRVYKGSRGPGHMGNDRVTAQGLKVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R LI VKG VPGA K ++++++ K Sbjct: 179 LVDTERNLIGVKGSVPGA-KGGLVVIKEARK 208 >gi|299065415|emb|CBJ36584.1| 50S ribosomal subunit protein L3 [Ralstonia solanacearum CMR15] Length = 209 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 86/202 (42%), Positives = 120/202 (59%), Gaps = 2/202 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V+ +G IPVTVL + +V +T + +GY AVQV G + V+KP+ G + Sbjct: 1 MTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGTRRASRVTKPLAGHLAK 60 Query: 72 VNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130 V + + EFR+ L +G F+VGQ +DV G TIGKG++G +KR++F Sbjct: 61 AGVEAGEIIVEFRIDATKAAELKLGDTIDVDLFSVGQKIDVQGTTIGKGYAGTIKRYHFS 120 Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190 RA+HG S SH GS G QDPGRVF K+M G MG TV+NL +V VD +R L+ Sbjct: 121 SGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVIVRVDAERKLLF 180 Query: 191 VKGCVPGAKKNSWILVRDSFKS 212 VKG VPGA K+ +++V + K+ Sbjct: 181 VKGAVPGA-KSGFVVVSPAVKA 201 >gi|170077685|ref|YP_001734323.1| 50S ribosomal protein L3 [Synechococcus sp. PCC 7002] gi|226730579|sp|B1XJT9|RL3_SYNP2 RecName: Full=50S ribosomal protein L3 gi|169885354|gb|ACA99067.1| ribosomal protein L3 [Synechococcus sp. PCC 7002] Length = 213 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 88/204 (43%), Positives = 126/204 (61%), Gaps = 3/204 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT +++ G IPVTV+ C V +T + +GY +VQ+G G+ K K Sbjct: 1 MSLGILGTKLGMTQIFDNETGTAIPVTVVQAGPCTVTQIKTSETDGYTSVQIGYGDVKEK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 N++KP G + +P + L E+R+ D +G + + F GQ+VDV+G TIG+G Sbjct: 61 NLTKPQLGHLKKADAAPLRHLKEYRLD-DVSGYELGQAITANIFEAGQVVDVSGNTIGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G KRHNF THG S +HR GSTG PGRV+ K+MAGR GG ++TV+ LEV Sbjct: 120 FAGYQKRHNFKRGNMTHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGRYGGTKITVRKLEV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSW 203 V VD+++ L+L+KG +PG N Sbjct: 179 VRVDEEKNLLLIKGAIPGKAGNLL 202 >gi|168334352|ref|ZP_02692539.1| 50S ribosomal protein L3 [Epulopiscium sp. 'N.t. morphotype B'] Length = 211 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 90/211 (42%), Positives = 122/211 (57%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A+K+GMT +++ IPVTVL C VV +T + +GY A+QVG K K Sbjct: 1 MKKAIMAKKIGMTQIFDENANLIPVTVLEAGPCTVVQKKTKENDGYEAIQVGFINKKEKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V KP G F V PKK L EFR D VG F G VDV G+T GKG+ Sbjct: 61 VIKPEAGHFEKAGVEPKKYLKEFRFD-DCSAFEVGGEIKAEVFVKGDKVDVAGVTKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 + ++K++ + HG S HR GS G +PGRV K K + RMGG+ VT++NLE+V Sbjct: 120 TSSIKKYGYSRGPMAHG-SKYHRHAGSMGAATNPGRVMKGKGLPSRMGGDNVTIQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD + LIL+KGCVPG K + + V++S K Sbjct: 179 RVDADKNLILIKGCVPGP-KGTVVTVKNSVK 208 >gi|145517081|ref|XP_001444429.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124411840|emb|CAK77032.1| unnamed protein product [Paramecium tetraurelia] Length = 409 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 96/216 (44%), Positives = 136/216 (62%), Gaps = 4/216 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K+GMT ++ G R +TVL LDN QVV + + Y +Q+GAG +K + Sbjct: 150 RAGLIAVKVGMTAQWDKWGYRHALTVLQLDNNQVVQV--VKNDTYTGLQIGAGRVNIKTL 207 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP G F N+ PKK + EF + + + LPVG + + +FT GQ +D+ G++ GKGF Sbjct: 208 KKPQIGHFLKANIPPKKYIKEFPITPE-NTLPVGFMLTARHFTPGQYIDIQGISTGKGFG 266 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNF ATHG S+ HR GSTG RQDPGRVFK KKM G +G ++VT + +++ Sbjct: 267 GTVKRHNFKTQPATHGNSLCHRQLGSTGQRQDPGRVFKGKKMPGHLGNDKVTCEGIQIYR 326 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 +D R LI +KG VPG S + +RDS+K+ K Sbjct: 327 IDAVRQLIYIKGSVPGKP-GSIVYLRDSWKAQKKNK 361 >gi|302523993|ref|ZP_07276335.1| 50S ribosomal protein L3 [Streptomyces sp. AA4] gi|302432888|gb|EFL04704.1| 50S ribosomal protein L3 [Streptomyces sp. AA4] Length = 216 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 91/211 (43%), Positives = 120/211 (56%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ + R +PVTV+ V RT DK+GY AVQ+ G + V+ Sbjct: 7 KGILGTKLGMTQVFDEQNRVVPVTVVKAGPNVVTQVRTTDKDGYAAVQLAFGAVDPRKVN 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P++ L E R D + VG + F G VDVTG + GKG++G Sbjct: 67 KPRTGHFDKAGVTPRRHLAELRTT-DAETYEVGQEITAEVFEAGTTVDVTGTSKGKGYAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G A+HG HR GS G PGRVFK +MAGRMG +RVT + L V +V Sbjct: 126 VMKRHGFKGQGASHGAQAVHRKPGSIGGCATPGRVFKGLRMAGRMGSDRVTTQGLTVHAV 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + GL+L+KG VPG K + VR + K Sbjct: 186 RAEDGLLLIKGAVPGP-KGGLLFVRSAAKGG 215 >gi|115400825|ref|XP_001216001.1| 60S ribosomal protein L9, mitochondrial precursor [Aspergillus terreus NIH2624] gi|114191667|gb|EAU33367.1| 60S ribosomal protein L9, mitochondrial precursor [Aspergillus terreus NIH2624] Length = 335 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 108/215 (50%), Positives = 140/215 (65%), Gaps = 3/215 (1%) Query: 1 MRSGVVARKLGMTCVYNI-EGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G VA K GMT VY+ GRRI TVL LD QVV H+T ++GY AVQVGAG Sbjct: 113 LRTGAVAIKKGMTGVYDAATGRRIACTVLQLDRVQVVAHKTRPQHGYYAVQVGAGWKHPS 172 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV+K + G FS+ VSPK+ +FEFRV+ + LLPVG S+F GQ VD T GKG Sbjct: 173 NVTKSLLGHFSAHGVSPKRHVFEFRVRDEAGLLPVGRDIPASWFREGQFVDARSTTKGKG 232 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKRH FGG +HGVS++HRS GS G Q G RV+ KKMAG MG + TV+NL+ Sbjct: 233 FAGVMKRHGFGGQDRSHGVSLTHRSMGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLK 292 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V+ VD + G+++V+G V G K + ++D+ K Sbjct: 293 VLKVDPENGIVVVQGAVSGP-KGCVVRIQDAIKKP 326 >gi|313112880|ref|ZP_07798526.1| 50S ribosomal protein L3 [Faecalibacterium cf. prausnitzii KLE1255] gi|310624785|gb|EFQ08094.1| 50S ribosomal protein L3 [Faecalibacterium cf. prausnitzii KLE1255] Length = 210 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 126/212 (59%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT +++ G+ +PVTV+ C VV +T++ +GY AVQ+G GE K Sbjct: 1 MVKGIIGKKVGMTQLFDANGKVVPVTVIEAGPCTVVQKKTVESDGYQAVQLGFGEVSAKK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F NV+PKK L EFR+ +D + VG V F G VDV G++ GKG+ Sbjct: 61 VNKAAAGHFKKANVAPKKTLREFRL-EDVSAMNVGDVLKADVFAEGDKVDVVGVSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR+ LR +HG R GS G P RVF K++ G MG RVTV+NL VV Sbjct: 120 QGVIKRYGQHRLRESHGTGPVARHAGSNGSTSTPARVFPGKRLPGHMGFVRVTVQNLTVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + LI VKG VPG+ K + I + +S K+ Sbjct: 180 KVDTENNLIAVKGAVPGS-KGTIITLANSVKA 210 >gi|226309808|ref|YP_002769702.1| 50S ribosomal protein L3 [Brevibacillus brevis NBRC 100599] gi|254803658|sp|C0ZII0|RL3_BREBN RecName: Full=50S ribosomal protein L3 gi|226092756|dbj|BAH41198.1| 50S ribosomal protein L3 [Brevibacillus brevis NBRC 100599] Length = 209 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 86/212 (40%), Positives = 124/212 (58%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT V+ G VTV+ + + V+ + ++ +GY A+Q+G + K + Sbjct: 1 MTKGILGKKLGMTQVFGPNGTATAVTVIEVGSNVVLQKKDVETDGYEAIQIGFEDKKEQR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + E R D VG F G++VDV G++ GKGF Sbjct: 61 ANKPEKGHAAKANTAPKRFIREIRGVNLAD-YEVGQELKADIFAEGEMVDVAGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRHN HG S HR GS G P RVFK + + G+MGG+ VT++NLEV+ Sbjct: 120 QGAIKRHNQSRGPMAHG-SRYHRGPGSMGAVA-PNRVFKGQTLPGQMGGDNVTIQNLEVI 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+LVKG VPG KNS +LV + K Sbjct: 178 KVDTERNLVLVKGSVPGP-KNSCVLVSTAVKK 208 >gi|296113797|ref|YP_003627735.1| 50S ribosomal protein L3 [Moraxella catarrhalis RH4] gi|295921491|gb|ADG61842.1| 50S ribosomal protein L3 [Moraxella catarrhalis RH4] gi|326562142|gb|EGE12470.1| 50S ribosomal protein L3 [Moraxella catarrhalis 7169] gi|326564493|gb|EGE14719.1| 50S ribosomal protein L3 [Moraxella catarrhalis 46P47B1] gi|326565676|gb|EGE15839.1| 50S ribosomal protein L3 [Moraxella catarrhalis 12P80B1] gi|326566245|gb|EGE16397.1| 50S ribosomal protein L3 [Moraxella catarrhalis 103P14B1] gi|326567103|gb|EGE17225.1| 50S ribosomal protein L3 [Moraxella catarrhalis BC1] gi|326568367|gb|EGE18447.1| 50S ribosomal protein L3 [Moraxella catarrhalis BC7] gi|326572268|gb|EGE22263.1| 50S ribosomal protein L3 [Moraxella catarrhalis BC8] gi|326574610|gb|EGE24550.1| 50S ribosomal protein L3 [Moraxella catarrhalis O35E] gi|326574866|gb|EGE24796.1| 50S ribosomal protein L3 [Moraxella catarrhalis 101P30B1] gi|326576190|gb|EGE26105.1| 50S ribosomal protein L3 [Moraxella catarrhalis CO72] Length = 212 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 98/213 (46%), Positives = 137/213 (64%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V +K GMT V+ G IPVTV+ +D ++ +T+D +GY A+Q+ GE + Sbjct: 1 MAIGLVGKKCGMTRVFTEAGVSIPVTVVEVDANRISQIKTVDTDGYNAIQITTGERRDSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + ++EFR ++ D + +G F VGQLVDVTG + GKG Sbjct: 61 VTAAQKGHFAKAGVAAGRGVWEFRAEESDLEGREIGGNILADIFEVGQLVDVTGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KRHNF ATHG S+SHR GSTG Q PGRVFK KKM G+MG RVTV+ LE+ Sbjct: 121 FQGGVKRHNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMPGQMGNKRVTVQGLEI 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VSVD ++G++++KG VPGA ++VR S K+ Sbjct: 181 VSVDAEKGVLVIKGAVPGANGGD-VIVRPSVKA 212 >gi|184155991|ref|YP_001844331.1| 50S ribosomal protein L3 [Lactobacillus fermentum IFO 3956] gi|227515487|ref|ZP_03945536.1| ribosomal protein L3 [Lactobacillus fermentum ATCC 14931] gi|260662752|ref|ZP_05863646.1| 50S ribosomal protein L3 [Lactobacillus fermentum 28-3-CHN] gi|212288403|sp|B2GDW9|RL3_LACF3 RecName: Full=50S ribosomal protein L3 gi|183227335|dbj|BAG27851.1| 50S ribosomal protein L3 [Lactobacillus fermentum IFO 3956] gi|227086100|gb|EEI21412.1| ribosomal protein L3 [Lactobacillus fermentum ATCC 14931] gi|260552833|gb|EEX25832.1| 50S ribosomal protein L3 [Lactobacillus fermentum 28-3-CHN] Length = 220 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 78/212 (36%), Positives = 120/212 (56%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ G +PVTV+ + V+ +TL+ +GY AVQ+G + + Sbjct: 1 MTKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQVKTLENDGYSAVQLGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + E R + D + VG + F G+ VDVTG T G G+ Sbjct: 61 SNKPEQGHAAKANTTPKRFIGEIRDAELGDDIKVGDKVAADIFAEGETVDVTGTTKGHGY 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G + + HG S HR GS G VFK KK+ GRMG N TV++L +V Sbjct: 121 QGNIHKDGQRRGPMAHG-SRYHRRPGSLGAI--INHVFKGKKLPGRMGNNTRTVQHLRIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + ++L+KG VPGA K S++ +++S K+ Sbjct: 178 KVDTENNVLLIKGNVPGANK-SFVTIKNSVKA 208 >gi|300309456|ref|YP_003773548.1| 50S ribosomal protein L3 [Herbaspirillum seropedicae SmR1] gi|300072241|gb|ADJ61640.1| 50S ribosomal subunit L3 protein [Herbaspirillum seropedicae SmR1] Length = 222 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 96/216 (44%), Positives = 125/216 (57%), Gaps = 2/216 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GM ++ +G IPVTVL + N +V +T + +GY AVQV G+ + Sbjct: 5 MSLGLVGRKVGMMRIFTEDGDSIPVTVLDVSNNRVTQIKTPEVDGYSAVQVTFGQRRASR 64 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V K G F+ V L EFRV L G V F GQ VDV G++IGKG Sbjct: 65 VVKAAAGHFAKAGVEAGTVLKEFRVDASKAAELKAGDVVGIGMFEAGQKVDVQGVSIGKG 124 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 ++G +KR+NF RATHG S SH GS G QDPGRVF K+M G +G + TV+NLE+ Sbjct: 125 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVKTTVQNLEI 184 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 VD +R L+LVKG VPGA KN ++V + K Sbjct: 185 ARVDAERQLLLVKGAVPGA-KNGQVIVSPAVKVKAK 219 >gi|91205877|ref|YP_538232.1| 50S ribosomal protein L3 [Rickettsia bellii RML369-C] gi|157826764|ref|YP_001495828.1| 50S ribosomal protein L3 [Rickettsia bellii OSU 85-389] gi|109893551|sp|Q1RHM1|RL3_RICBR RecName: Full=50S ribosomal protein L3 gi|166234585|sp|A8GVB4|RL3_RICB8 RecName: Full=50S ribosomal protein L3 gi|91069421|gb|ABE05143.1| 50S ribosomal protein L3 [Rickettsia bellii RML369-C] gi|157802068|gb|ABV78791.1| 50S ribosomal protein L3 [Rickettsia bellii OSU 85-389] Length = 215 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 109/212 (51%), Positives = 163/212 (76%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+K+GMT V+N G+R+P+T++ +D+CQVV H+ +K+GY A+ +G + K+ Sbjct: 1 MRTGIIAQKVGMTSVFNNNGKRVPLTLVKVDDCQVVGHKIAEKHGYNALVIGIKDKKISR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+ F++ VSPK KL EFR+ +D + + + + +FT GQ +DVT TIGKGF Sbjct: 61 VTKPMKQVFANAKVSPKTKLKEFRISED-NFIDIAASLEVDHFTAGQFIDVTATTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG ++VT++NL++ Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCSQVTIQNLKIF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 ++D ++GLI+++G +PG K S+I ++D+ K Sbjct: 180 AIDKEQGLIMIQGSIPG-HKGSYISIKDAIKK 210 >gi|322710687|gb|EFZ02261.1| 60S ribosomal protein L3 [Metarhizium anisopliae ARSEF 23] Length = 639 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 101/217 (46%), Positives = 143/217 (65%), Gaps = 3/217 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+GV+A K GMT ++ + RIP TVL LD QVV ++T +K+GY AVQ+GAG + +N Sbjct: 382 LRAGVLATKKGMTSMF-VGKTRIPCTVLQLDQVQVVANKTREKHGYWAVQIGAGSRQPRN 440 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ PM G++ + ++PK +L EF V+ + LLPVGS P +F GQ+VDV + G GF Sbjct: 441 VTSPMLGYYEAKGIAPKSQLAEFTVRGREGLLPVGSQLLPDWFQTGQIVDVRAKSRGMGF 500 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179 +G MKRH F G A+HG S +HR+ G+TG Q G RV KKM GRMG VTV+NL+V Sbjct: 501 AGGMKRHGFAGQEASHGNSKNHRTIGTTGPSQGSGSRVLPGKKMPGRMGNEWVTVQNLKV 560 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 + VD++ G++LV G VPG K + + ++D+ K Sbjct: 561 MKVDNELGIVLVSGAVPGPKGRA-VKLQDAKKRKAPA 596 >gi|229587009|ref|YP_002845510.1| 50S ribosomal protein L3 [Rickettsia africae ESF-5] gi|259709733|sp|C3PPA7|RL3_RICAE RecName: Full=50S ribosomal protein L3 gi|228022059|gb|ACP53767.1| 50S ribosomal protein L3 [Rickettsia africae ESF-5] Length = 215 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 114/212 (53%), Positives = 164/212 (77%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ VG + K+ Sbjct: 1 MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVVGVKDKKISR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPMR F++ +SPK KL EFR+ ++ + + + + +FT GQ VD+T TIGKGF Sbjct: 61 VTKPMRQVFANAKISPKTKLKEFRISEE-NFIDIAASLEVDHFTAGQFVDITATTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +VD +R LI+++G +PG KNS++ V+D+ K Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIKK 210 >gi|121608243|ref|YP_996050.1| 50S ribosomal protein L3 [Verminephrobacter eiseniae EF01-2] gi|166234606|sp|A1WHC5|RL3_VEREI RecName: Full=50S ribosomal protein L3 gi|121552883|gb|ABM57032.1| LSU ribosomal protein L3P [Verminephrobacter eiseniae EF01-2] Length = 224 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 85/211 (40%), Positives = 128/211 (60%), Gaps = 3/211 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G +PVTV+ + + +V +T + +GY+A+QV G K VSK Sbjct: 8 GLLGRKVGMMRLFTDDGDAVPVTVVDVSDNRVTQVKTQENDGYVALQVTFGARKASRVSK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121 P G + V + + EFRV D G+ + S F+VGQ VDV G +IGKG++ Sbjct: 68 PEAGHLAKAGVQAGEIIQEFRVSADTAAQYQAGASVAITSVFSVGQKVDVQGTSIGKGYA 127 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHN RA+HG S SH GS G QDPGRVF K+M G +G T +NL+++ Sbjct: 128 GTIKRHNMRSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDATRTTQNLDLIR 187 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D+ R L+L+KG +PG+ K ++ VR + +S Sbjct: 188 IDEARQLLLIKGAIPGS-KGGFVTVRPAVRS 217 >gi|237739366|ref|ZP_04569847.1| LSU ribosomal protein L3P [Fusobacterium sp. 2_1_31] gi|229422974|gb|EEO38021.1| LSU ribosomal protein L3P [Fusobacterium sp. 2_1_31] Length = 211 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 89/212 (41%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT ++ +G+ +PVTV+ V+ +T +K+GY+A+Q+G E K KN + Sbjct: 2 SGILGKKIGMTQIF-EDGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ V P++ + E V+ + +G VD+TG + GKG SG Sbjct: 61 KPLMGIFNKAGVKPQRFVRELAVES-VEGYELGQEIKVDVLAEVGYVDITGTSKGKGTSG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGG RA+HGVS +HR GS G PG+V K K+MAG+ G VTV+NL+VV V Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D + L+L+KG VPGA KNS+++++ + K + Sbjct: 180 DVEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210 >gi|239817873|ref|YP_002946783.1| 50S ribosomal protein L3 [Variovorax paradoxus S110] gi|259709746|sp|C5CP53|RL3_VARPS RecName: Full=50S ribosomal protein L3 gi|239804450|gb|ACS21517.1| ribosomal protein L3 [Variovorax paradoxus S110] Length = 226 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 86/215 (40%), Positives = 128/215 (59%), Gaps = 3/215 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G +PVTV+ + N +V ++ + +GY+A+QV G K V+K Sbjct: 8 GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQIKSQETDGYVALQVTFGSRKASRVTK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFS 121 P G + V + + EFRV D G+V + S F+VGQ VDV G +IGKG++ Sbjct: 68 PQAGHLAKAGVEAGEIIREFRVTADTAGQHKAGAVIAASSVFSVGQKVDVQGTSIGKGYA 127 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHN RA+HG S SH GS G QDPGRVF K+M G +G T +NL+V Sbjct: 128 GTIKRHNMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTKTTQNLDVFR 187 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 +D+ R L+L+KG +PG+ K ++ VR + K+ Sbjct: 188 IDEARQLLLIKGAIPGS-KGGFVTVRPAIKAKPQA 221 >gi|157828860|ref|YP_001495102.1| 50S ribosomal protein L3 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933587|ref|YP_001650376.1| 50S ribosomal protein L3 [Rickettsia rickettsii str. Iowa] gi|238650972|ref|YP_002916828.1| 50S ribosomal protein L3 [Rickettsia peacockii str. Rustic] gi|166234587|sp|A8GT69|RL3_RICRS RecName: Full=50S ribosomal protein L3 gi|189029476|sp|B0BUR0|RL3_RICRO RecName: Full=50S ribosomal protein L3 gi|259709734|sp|C4K2H9|RL3_RICPU RecName: Full=50S ribosomal protein L3 gi|157801341|gb|ABV76594.1| 50S ribosomal protein L3 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908674|gb|ABY72970.1| LSU ribosomal protein L3P [Rickettsia rickettsii str. Iowa] gi|238625070|gb|ACR47776.1| 50S ribosomal protein L3 [Rickettsia peacockii str. Rustic] Length = 215 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 113/212 (53%), Positives = 164/212 (77%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G + K+ Sbjct: 1 MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPMR F++ +SPK KL EFR+ ++ + + + + +FT GQ VD+T TIGKGF Sbjct: 61 VTKPMRQVFANAKISPKTKLKEFRISEE-NFIDIAASLEVDHFTAGQFVDITATTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +VD +R LI+++G +PG KNS++ V+D+ K Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIKK 210 >gi|157804035|ref|YP_001492584.1| 50S ribosomal protein L3 [Rickettsia canadensis str. McKiel] gi|166234586|sp|A8EZL6|RL3_RICCK RecName: Full=50S ribosomal protein L3 gi|157785298|gb|ABV73799.1| 50S ribosomal protein L3 [Rickettsia canadensis str. McKiel] Length = 215 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 111/212 (52%), Positives = 163/212 (76%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G + K+ Sbjct: 1 MRTGIIAQKIGMTSVFNDKGERIALTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+ F++ +SPK KL EFR+ ++ + + V + +F GQ VD+T +TIGKGF Sbjct: 61 VTKPMKQVFANAKISPKTKLKEFRISEE-NFIDVAASLEVDHFMAGQFVDITAITIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +VD R LI+++G +PG KNS++ ++D+ K Sbjct: 180 AVDKDRKLIMIQGSIPG-HKNSYLSIKDAIKK 210 >gi|313888808|ref|ZP_07822469.1| 50S ribosomal protein L3 [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845177|gb|EFR32577.1| 50S ribosomal protein L3 [Peptoniphilus harei ACS-146-V-Sch2b] Length = 210 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 87/207 (42%), Positives = 127/207 (61%), Gaps = 3/207 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 +V +K+GMT +++ EG PV+V+ ++ VV +T++ +GY A+QV E K + ++KP Sbjct: 4 LVGKKIGMTQIFDEEGIVTPVSVIEVEPNVVVQKKTIESDGYNAIQVATQEVKERRLNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +G V +K L EFR D + +G F VG+ VDV G + GKG +G + Sbjct: 64 EKGHLDKAGVGYRKHLSEFRTD-DVESYNLGDEIKVDLFEVGEHVDVVGTSKGKGTAGII 122 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHNFG R THG S HR G G PG+V+KN +MAG+MG RVTV+NLE+V +D Sbjct: 123 KRHNFGRGRETHG-SKFHRMPGGMGAASYPGKVWKNHRMAGKMGNERVTVQNLEIVRIDT 181 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211 + LILVKG +PG KK + + ++ + K Sbjct: 182 DKNLILVKGAIPGPKKGT-VRIKSTVK 207 >gi|241765217|ref|ZP_04763200.1| ribosomal protein L3 [Acidovorax delafieldii 2AN] gi|241365097|gb|EER59976.1| ribosomal protein L3 [Acidovorax delafieldii 2AN] Length = 224 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 84/214 (39%), Positives = 126/214 (58%), Gaps = 3/214 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G +PVTV+ + N +V +T + +GY+A+QV G K V+K Sbjct: 8 GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVALQVTFGSRKASRVTK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121 P G + V + + EFRV + G+ F VGQ VDV G +IGKG++ Sbjct: 68 PEAGHLAKAGVEAGEIIQEFRVTAETAGKYAAGAAVPVADVFAVGQKVDVQGTSIGKGYA 127 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHN RA+HG S SH GS G QDPGRVF K+M G +G T +NL+V+ Sbjct: 128 GTIKRHNMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTKTTQNLDVIR 187 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +D+ R L+L+KG +PG+ K ++ VR + K+ + Sbjct: 188 IDEARQLLLIKGAIPGS-KGGFVTVRPAVKAKAS 220 >gi|86605866|ref|YP_474629.1| 50S ribosomal protein L3 [Synechococcus sp. JA-3-3Ab] gi|109893563|sp|Q2JV81|RL3_SYNJA RecName: Full=50S ribosomal protein L3 gi|86554408|gb|ABC99366.1| ribosomal protein L3 [Synechococcus sp. JA-3-3Ab] Length = 214 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 85/211 (40%), Positives = 124/211 (58%), Gaps = 4/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT +++ EG IPVTV+ C V +T +GY AVQ+G K+ Sbjct: 1 MALGILGRKVGMTQIFSPEGLAIPVTVVQAGPCTVTQIKTQATDGYNAVQLGYWPTAEKH 60 Query: 61 VSKPMRGFFSSVNV-SPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +++ RG S V + L EFRV + +G + F+ GQL+DV G +IG+G Sbjct: 61 LTRAQRGHLSKAGVTELLRHLREFRVD-QPEAYQLGQKITVEIFSPGQLLDVAGTSIGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G KRH+FG +HG S +HR GS G PGRVF +MAGRMGG RVT++ L++ Sbjct: 120 FAGYQKRHHFGRGPMSHG-SKNHRRPGSVGAGTTPGRVFPGLRMAGRMGGCRVTIRKLQL 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V VD +R L+++KG VPG + + + + Sbjct: 179 VQVDPERNLLIIKGSVPGVE-GGLLEITPAK 208 >gi|322418364|ref|YP_004197587.1| 50S ribosomal protein L3 [Geobacter sp. M18] gi|320124751|gb|ADW12311.1| 50S ribosomal protein L3 [Geobacter sp. M18] Length = 211 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 88/212 (41%), Positives = 124/212 (58%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT ++ +GRRI VTV+ C V+ ++++K+GY A+QVG + Sbjct: 1 MNKGLIGKKLGMTQIFAEDGRRIAVTVVEAGPCVVLQKKSVEKDGYTAIQVGYVQKDAAR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + G S E R+ D +G V F G LVDVTG +IGKGF Sbjct: 61 ANAAQVGHCKSAGAGVFTHYRELRMDNTDA-YNLGDVIEAGVFAEGDLVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR F G R++HG S HR+ GS GC P RVFKNKKM G++G +VTV+ L+VV Sbjct: 120 AGVIKRWGFKGGRSSHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQLGNEKVTVQRLKVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD LIL+ G +PG+ N +L++DS K+ Sbjct: 179 RVDAADNLILLGGAIPGSA-NGVVLIKDSVKA 209 >gi|261854950|ref|YP_003262233.1| 50S ribosomal protein L3 [Halothiobacillus neapolitanus c2] gi|261835419|gb|ACX95186.1| 50S ribosomal protein L3 [Halothiobacillus neapolitanus c2] Length = 214 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 93/212 (43%), Positives = 125/212 (58%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK+GMT V++ G PVTV+ ++ +V +T + +GY AVQV G + Sbjct: 1 MSLGVVGRKVGMTRVFDDAGVSTPVTVIEVEPNRVTQLKTPEVDGYTAVQVTTGTRRASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K M G ++ + + EFR+ D+ G+ + S F + VDV G + GKG Sbjct: 61 VTKAMAGHYAKAETASGRMSTEFRISADELAGFQPGAEITVSIFDGVEKVDVAGQSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KR+NF ATHG S SHR GS G Q PGRVF KKM+G MG RV+ L+V Sbjct: 121 FAGTVKRYNFRTQDATHGNSRSHRVPGSIGQNQTPGRVFPGKKMSGHMGDERVSSLGLKV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +RGLILVKG VPG+ ++VR S K Sbjct: 181 VRVDVERGLILVKGAVPGSTGGD-VIVRPSVK 211 >gi|262066304|ref|ZP_06025916.1| 50S ribosomal protein L3 [Fusobacterium periodonticum ATCC 33693] gi|294783642|ref|ZP_06748966.1| 50S ribosomal protein L3 [Fusobacterium sp. 1_1_41FAA] gi|291379999|gb|EFE87517.1| 50S ribosomal protein L3 [Fusobacterium periodonticum ATCC 33693] gi|294480520|gb|EFG28297.1| 50S ribosomal protein L3 [Fusobacterium sp. 1_1_41FAA] Length = 211 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 89/212 (41%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT ++ +G+ +PVTV+ V+ +T +K+GY+A+Q+G E K KN + Sbjct: 2 SGILGKKIGMTQIF-EDGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ V P++ + E V + + +G VD+TG + GKG SG Sbjct: 61 KPLMGIFNKAGVKPQRFVRELAV-ETVEGYELGQEIKVDVLAEVGYVDITGTSKGKGTSG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGG RA+HGVS +HR GS G PG+V K K+MAG+ G VTV+NL+VV V Sbjct: 120 VMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D + L+L+KG VPGA KNS+++++ + K + Sbjct: 180 DVEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210 >gi|288925715|ref|ZP_06419647.1| 50S ribosomal protein L3 [Prevotella buccae D17] gi|315606504|ref|ZP_07881519.1| 50S ribosomal protein L3 [Prevotella buccae ATCC 33574] gi|288337653|gb|EFC76007.1| 50S ribosomal protein L3 [Prevotella buccae D17] gi|315251910|gb|EFU31884.1| 50S ribosomal protein L3 [Prevotella buccae ATCC 33574] Length = 204 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 85/205 (41%), Positives = 127/205 (61%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G GEAK K SK Sbjct: 3 GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F +PKK L EF+ ++ +G + F + VDV G++ GKGF G Sbjct: 63 PQLGHFKKAGTTPKKHLAEFKFDEE---YNLGDTINVELFNDTKFVDVVGISKGKGFQGV 119 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGG ++THG R GS G P +VFK +MAG+MGG+RVT +NL+V+ V Sbjct: 120 MKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLQVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 ++ L++VKG + G K ++ ++ + Sbjct: 180 IPEQNLLIVKGSIAGCKGSTVLIEK 204 >gi|213962845|ref|ZP_03391105.1| 50S ribosomal protein L3 [Capnocytophaga sputigena Capno] gi|213954502|gb|EEB65824.1| 50S ribosomal protein L3 [Capnocytophaga sputigena Capno] Length = 225 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 82/205 (40%), Positives = 127/205 (61%), Gaps = 4/205 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP T++ C V RT + +GY A+Q+G + K + Sbjct: 22 SGLIGKKVGMTSIFDENGKNIPCTIIEAGPCVVTQVRTKEVDGYDALQLGFDDKAEKRAT 81 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F S KKK+ EF+ +D+ +G + +FT G+ VD+TG++ GKGF G Sbjct: 82 KAELGHFKKAGTSVKKKVVEFQGFEDN--YKLGDTITVDFFTEGEFVDITGVSKGKGFQG 139 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 ++RH FGG + THG R+ GS G P RVFK +MAGRMG +VTV+NL+V+ Sbjct: 140 VVRRHGFGGVGQTTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVLK 199 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 V ++ L++VKGC+PG KN+++ + Sbjct: 200 VVAEKNLLVVKGCIPG-HKNAYVTI 223 >gi|312870514|ref|ZP_07730633.1| 50S ribosomal protein L3 [Lactobacillus oris PB013-T2-3] gi|311093976|gb|EFQ52301.1| 50S ribosomal protein L3 [Lactobacillus oris PB013-T2-3] Length = 220 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 78/212 (36%), Positives = 121/212 (57%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY AVQ+G + + Sbjct: 1 MAKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQIKTVENDGYNAVQLGFDDKREIL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + E R + D + VG F G+ VDVTG+T G G+ Sbjct: 61 SNKPEQGHAAKANTTPKRFIGEIRDAELGDDIKVGDEVKADVFAEGETVDVTGVTKGHGY 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G + + N HG S HR GS G RVFK K+ GRMG VT+++L+VV Sbjct: 121 QGNIHKDNQSRGPMAHG-SRYHRRPGSLGAI--INRVFKGMKLPGRMGNKTVTMQHLQVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++L+KG VPGA K S++ +++S K+ Sbjct: 178 KVDLDNNVLLIKGNVPGANK-SYVTIKNSVKA 208 >gi|284992874|ref|YP_003411428.1| 50S ribosomal protein L3 [Geodermatophilus obscurus DSM 43160] gi|284066119|gb|ADB77057.1| 50S ribosomal protein L3 [Geodermatophilus obscurus DSM 43160] Length = 221 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 93/210 (44%), Positives = 120/210 (57%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ C V RT + +GY AVQ+G GE + V+K Sbjct: 7 GLLGEKLGMTQVFDENNRIVPVTVVKAGPCVVTQVRTPEVDGYSAVQLGFGEIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V+P++ L E R KD VG + F VDV G + GKG +G Sbjct: 67 PEGGHFTKAGVTPRRHLVELR-TKDASEYTVGQELTAEVFDGVAKVDVIGTSKGKGTAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GL A HG HRS GS G PGRVFK +MAGRMG + T +L V VD Sbjct: 126 MKRHGFKGLGAAHGTQRKHRSPGSIGGASTPGRVFKGLRMAGRMGAVKTTTLSLTVHKVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +RGL+L+KG +PG K +LVR + K Sbjct: 186 AERGLLLIKGAIPGP-KGGLVLVRSAVKGG 214 >gi|321259123|ref|XP_003194282.1| ribosomal large subunit assembly and maintenance-related protein [Cryptococcus gattii WM276] gi|317460753|gb|ADV22495.1| Ribosomal large subunit assembly and maintenance-related protein, putative [Cryptococcus gattii WM276] Length = 308 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 103/222 (46%), Positives = 139/222 (62%), Gaps = 4/222 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVK 59 +R+G++ARK GMT +++ +GRR PVTVL +D QVV H + Y +Q+GA + K Sbjct: 43 LRTGLIARKRGMTALWDADGRRWPVTVLQVDANQVVRHSPPPPTSPYHTLQIGASPRREK 102 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +K G F V PK +L EF+V D ++PVG+ S +F GQ VDV G+TIGKG Sbjct: 103 TTTKQQLGHFRKAGVEPKYRLKEFQVSGD-AVVPVGTELSAGHFVPGQFVDVQGVTIGKG 161 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKRH F GL+A+HG S+ HRS GS G QDPGRV KKM G MG T +NL + Sbjct: 162 FQGVMKRHGFRGLKASHGTSVKHRSGGSIGQNQDPGRVIPGKKMPGHMGNATRTTQNLLI 221 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 VD L+ V+GCVPG+ +S++ V+DS K V K +++ Sbjct: 222 HRVDHILNLLYVRGCVPGSD-DSFLYVKDS-KKLVKSKAQLA 261 >gi|238922830|ref|YP_002936343.1| 50S ribosomal protein L3 [Eubacterium rectale ATCC 33656] gi|259646545|sp|C4ZBD4|RL3_EUBR3 RecName: Full=50S ribosomal protein L3 gi|238874502|gb|ACR74209.1| 50S ribosomal protein L3 [Eubacterium rectale ATCC 33656] gi|291523732|emb|CBK89319.1| LSU ribosomal protein L3P [Eubacterium rectale DSM 17629] gi|291528802|emb|CBK94388.1| LSU ribosomal protein L3P [Eubacterium rectale M104/1] Length = 227 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 89/229 (38%), Positives = 122/229 (53%), Gaps = 19/229 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58 M+ ++A K+GMT ++N +G +PVTVL C V +T++ +GY AVQVG G+ K Sbjct: 1 MKKAILATKIGMTQIFNADGVLVPVTVLEAGPCVVTQIKTVENDGYSAVQVGFGDKKEKV 60 Query: 59 --------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V+K G F VS K+ + EF+ + D+ + F Sbjct: 61 VEKDANGKKSVAHRHGVNKAQMGHFKKAGVSGKRFVREFKFENADE-YNLADEIKADIFA 119 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G VDVT ++ GKGF GA+KR HG S HR GS G P +VFK K M Sbjct: 120 EGDKVDVTAISKGKGFQGAIKRLGQHRGPMAHG-SKFHRHQGSNGACSSPSKVFKGKGMP 178 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 G MG +VT +NLEVV VD + L+L+KG VPGAKK + I V+++ KS Sbjct: 179 GHMGSVKVTTQNLEVVRVDADKNLLLIKGAVPGAKK-ALITVKETTKSG 226 >gi|15892929|ref|NP_360643.1| 50S ribosomal protein L3 [Rickettsia conorii str. Malish 7] gi|42559674|sp|Q92GW6|RL3_RICCN RecName: Full=50S ribosomal protein L3 gi|15620121|gb|AAL03544.1| 50S ribosomal protein L3 [Rickettsia conorii str. Malish 7] Length = 215 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 113/212 (53%), Positives = 164/212 (77%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G + K+ Sbjct: 1 MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPMR F++ +SPK KL EFR+ ++ + + + + +FT GQ VD+T TIGKGF Sbjct: 61 VTKPMRQVFANAKISPKTKLKEFRISEE-NFIDIAASLEVDHFTAGQFVDITATTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNKVTIQNLKIF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +VD +R LI+++G +PG KNS++ V+D+ K Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIKK 210 >gi|162446957|ref|YP_001620089.1| 50S ribosomal protein L3 [Acholeplasma laidlawii PG-8A] gi|189042828|sp|A9NED3|RL3_ACHLI RecName: Full=50S ribosomal protein L3 gi|161985064|gb|ABX80713.1| large subunit ribosomal protein L3 [Acholeplasma laidlawii PG-8A] Length = 212 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 83/216 (38%), Positives = 123/216 (56%), Gaps = 8/216 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT +++ G IPVTV+ ++ V+ +T++ +GY A QVG + K Sbjct: 1 MAKGILGRKIGMTQIFDENGVLIPVTVIDVEGNVVLQQKTVEVDGYQATQVGFESKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL---LPVGSVFSPSYFTVGQLVDVTGMTIG 117 +KP G N +PK+ + E R ++ L VG+ FT G+ VDVTG + G Sbjct: 61 SNKPELGHVKKANTAPKRFVKEIRFDALNNELLALEVGTEIKADLFTAGEDVDVTGTSKG 120 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF G +KRHN THG S HR GS G + K K + G+MG +VTV+NL Sbjct: 121 KGFQGNIKRHNQSRGPMTHG-SRYHRGVGSLGAIKGN---MKGKNLPGQMGNEQVTVQNL 176 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++V+VD + L+LV G VPG +K +++VR + K Sbjct: 177 KIVAVDTENDLLLVSGSVPGPRKG-YVVVRSAIKKG 211 >gi|332042720|gb|EGI78920.1| 50S ribosomal protein L3 [Lacinutrix algicola 5H-3-7-4] Length = 205 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 85/206 (41%), Positives = 127/206 (61%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C V RT + +GY AVQ+G +A K+ + Sbjct: 2 SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCIVTQVRTEEVDGYKAVQLGFDDATEKSAT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G S K+K+ EF+ + + +G + +F G+ VDV+G + GKGF G Sbjct: 62 KADLGHAKKAGTSVKRKIAEFQGFE--EEYKLGDAITVEHFAEGEFVDVSGTSKGKGFQG 119 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG +ATHG R+ GS G P RVFK KMAGRMGG+ + V+NL V+ Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGRMGGDTIKVQNLRVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L++VKGCVPG KN+++++R Sbjct: 180 VVTEKNLLVVKGCVPG-HKNAYVIIR 204 >gi|259502531|ref|ZP_05745433.1| 50S ribosomal protein L3 [Lactobacillus antri DSM 16041] gi|259169483|gb|EEW53978.1| 50S ribosomal protein L3 [Lactobacillus antri DSM 16041] Length = 220 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 78/212 (36%), Positives = 121/212 (57%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY AVQ+G + + Sbjct: 1 MAKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQVKTVENDGYNAVQLGFDDKREIL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + E R + D + VG F G+ VDVTG+T G G+ Sbjct: 61 SNKPEQGHAAKANTTPKRFIGEIRDAELGDDIKVGDEVKADVFAEGETVDVTGVTKGHGY 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G + + N HG S HR GS G RVFK K+ GRMG VT+++L+VV Sbjct: 121 QGNIHKDNQSRGPMAHG-SRYHRRPGSLGAI--INRVFKGMKLPGRMGNKTVTMQHLQVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++L+KG VPGA K S++ +++S K+ Sbjct: 178 KVDLDNNVLLIKGNVPGANK-SYVTIKNSVKA 208 >gi|17231707|ref|NP_488255.1| 50S ribosomal protein L3 [Nostoc sp. PCC 7120] gi|42559670|sp|Q8YPH9|RL3_ANASP RecName: Full=50S ribosomal protein L3 gi|17133350|dbj|BAB75914.1| 50S ribosomal protein L3 [Nostoc sp. PCC 7120] Length = 211 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 84/211 (39%), Positives = 126/211 (59%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT +++ G IPVTV+ + C V ++ +GY A+QVG GE K K Sbjct: 1 MSVGILGTKLGMTQIFDEAGVAIPVTVVQVGPCVVTQVKSKQTDGYAAIQVGYGEVKPKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P+ G + + + L E+ D +G F+VG+LVDV G +IG+GF Sbjct: 61 LNRPLLGHLAKSSAPALRHLKEYHTDGSSD-YALGQEIKADIFSVGELVDVIGTSIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KR+NFG +HG S +HR+ GS G PGRV+ K+MAGR+GG RVT++ L V+ Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGTRVTIRKLTVI 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L+L+KG VPG + + + + K Sbjct: 179 RVDAERNLLLIKGAVPGKP-GALLSIVPAKK 208 >gi|331004121|ref|ZP_08327601.1| 50S ribosomal protein L3 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411531|gb|EGG90941.1| 50S ribosomal protein L3 [Lachnospiraceae oral taxon 107 str. F0167] Length = 225 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 82/227 (36%), Positives = 119/227 (52%), Gaps = 18/227 (7%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ARK+GMT +++ G IPVTVL C V +T + +GY +VQV G+ + K Sbjct: 1 MKKAILARKVGMTQIFDENGVLIPVTVLLAGPCVVTQVKTEENDGYNSVQVAYGQIRTKL 60 Query: 61 VSKPMRGFFSSVNVS---------------PKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105 V+K G + + + + EF+ + + P + F Sbjct: 61 VNKAKAGHLAKAGIEKVVVENGDKKREIFTAGRFIREFKFENASEYAP-KAEIKADIFAA 119 Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165 G +D T ++ GKGF GA+KRH +HG S HR GS G DP VFK K M G Sbjct: 120 GDKIDATAISKGKGFQGAIKRHGQSRGPMSHG-SKFHRHQGSNGSSSDPSHVFKGKGMPG 178 Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 MG RVT +NLE+V VD + LILVKG +PG+KK + I ++++ K Sbjct: 179 HMGAKRVTTQNLEIVRVDADKNLILVKGSMPGSKK-ALITLKETVKK 224 >gi|304384275|ref|ZP_07366686.1| 50S ribosomal protein L3 [Prevotella marshii DSM 16973] gi|304334591|gb|EFM00873.1| 50S ribosomal protein L3 [Prevotella marshii DSM 16973] Length = 204 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 88/205 (42%), Positives = 124/205 (60%), Gaps = 5/205 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V++ +G+ +P TV+ C V +TL+K+GY AVQ+G EAK +K Sbjct: 3 GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTLEKDGYKAVQLGFAEAKESRTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 PM G F +PKK L EF+ +++ +G + F + VDV G + GKGF G Sbjct: 63 PMLGIFKKAGTTPKKHLVEFKFEEE---YNLGDTITVELFNDTEFVDVVGTSKGKGFQGV 119 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG ++THG R GS G P +VFK +MAG+MGG+RVT +NL V+ V Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLRVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + LILVKG V G K S +L++ Sbjct: 180 IPEHNLILVKGSVAGC-KGSTVLIK 203 >gi|150008984|ref|YP_001303727.1| 50S ribosomal protein L3 [Parabacteroides distasonis ATCC 8503] gi|255014815|ref|ZP_05286941.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_7] gi|256841015|ref|ZP_05546522.1| 50S ribosomal protein L3 [Parabacteroides sp. D13] gi|262383874|ref|ZP_06077010.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_33B] gi|298375783|ref|ZP_06985739.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_19] gi|301312033|ref|ZP_07217955.1| 50S ribosomal protein L3 [Bacteroides sp. 20_3] gi|166233171|sp|A6LEJ1|RL3_PARD8 RecName: Full=50S ribosomal protein L3 gi|149937408|gb|ABR44105.1| ribosomal protein L3 [Parabacteroides distasonis ATCC 8503] gi|256736858|gb|EEU50185.1| 50S ribosomal protein L3 [Parabacteroides sp. D13] gi|262294772|gb|EEY82704.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_33B] gi|298266820|gb|EFI08477.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_19] gi|300830135|gb|EFK60783.1| 50S ribosomal protein L3 [Bacteroides sp. 20_3] Length = 205 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 85/204 (41%), Positives = 123/204 (60%), Gaps = 4/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EG+ +P TV+ + C V +TL+K+GY AVQ+G E K K+ ++ Sbjct: 3 GLLGKKIGMTSVFSAEGKNLPCTVIEVGPCVVTQIKTLEKDGYEAVQLGFQEKKEKHTTQ 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ L EF+ + +G V + + VDV G + GKGF G Sbjct: 63 PEMGHFKKAGVAPQRHLAEFK--NFETEYKLGDVITVDFLEDAGFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG + THG R GS G P +VFK +M G+MG RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGNERVTVQNLQVIKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 + L+LVKG VPGA K S +L+ Sbjct: 181 MPEHNLLLVKGSVPGA-KGSILLI 203 >gi|302662377|ref|XP_003022845.1| hypothetical protein TRV_03069 [Trichophyton verrucosum HKI 0517] gi|291186810|gb|EFE42227.1| hypothetical protein TRV_03069 [Trichophyton verrucosum HKI 0517] Length = 304 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 101/215 (46%), Positives = 144/215 (66%), Gaps = 3/215 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GMT +Y+ G R P TVL LD QV+ H+T +KNGY AVQVG+G + Sbjct: 77 LRTGALAIKKGMTAIYDPETGVRTPCTVLQLDGAQVISHKTFEKNGYCAVQVGSGLKSER 136 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV++PM G FS+ VSPK+ + EFRV+ + LLP+G V + +F GQ VDV + G G Sbjct: 137 NVTRPMLGHFSANGVSPKRHIHEFRVKDETGLLPIGEVINADWFQEGQYVDVRSNSRGMG 196 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+GAMK+ F G +HGVS++HRS GST Q G RV+ KKM GRMG ++VT+++L+ Sbjct: 197 FAGAMKKWGFHGQDRSHGVSLTHRSLGSTAPSQGGGSRVYPGKKMPGRMGNHQVTLQSLK 256 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V+ VD ++G+++VKG V G K + ++D+ K Sbjct: 257 VLKVDAEKGIVVVKGGVAGPKGRC-VKIQDAIKKP 290 >gi|260655383|ref|ZP_05860871.1| 50S ribosomal protein L3 [Jonquetella anthropi E3_33 E1] gi|260629831|gb|EEX48025.1| 50S ribosomal protein L3 [Jonquetella anthropi E3_33 E1] Length = 207 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 104/204 (50%), Positives = 132/204 (64%), Gaps = 2/204 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GMT VY+ EGR IPVTV+ C VV RT +KNGY AV +G E K + VS Sbjct: 2 IGILGQKVGMTRVYSEEGRAIPVTVIAAGPCPVVDLRTPEKNGYSAVLLGFSERKPQRVS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F V+P + L EFRV D +G + S F G+ VDVTG + GKG +G Sbjct: 62 KPLAGTFKRAGVTPCRWLREFRV-ADSGKWEIGGTVNVSLFQAGEAVDVTGTSKGKGTAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR+ FGG A+HGVS +HR S+G P RVFK K+M GRMG RVTVKNL VV++ Sbjct: 121 VIKRYGFGGAPASHGVSKTHRKPNSSGASSYPSRVFKGKRMPGRMGNERVTVKNLTVVAI 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 D + L+LVKG VPGA KN +LV Sbjct: 181 DVENNLLLVKGAVPGA-KNGLVLV 203 >gi|145525954|ref|XP_001448788.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124416354|emb|CAK81391.1| unnamed protein product [Paramecium tetraurelia] Length = 409 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 97/216 (44%), Positives = 137/216 (63%), Gaps = 4/216 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K+GMT ++ G R +TVL LDN QVV + + Y +QVGAG +K + Sbjct: 150 RAGLIAVKVGMTAQWDKWGYRHALTVLQLDNNQVVQV--VKNDTYTGLQVGAGAVNIKTL 207 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP G F N+ PKK + EF + + ++LPVG + + +FT GQ +D+ G++ GKGF Sbjct: 208 KKPQIGHFLKANIPPKKYIKEFPITPE-NVLPVGFMLTARHFTPGQYIDIQGISTGKGFG 266 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNF ATHG S+ HR GSTG RQDPGRVFK KKM G +G ++VT + +++ Sbjct: 267 GTVKRHNFKTQPATHGNSLCHRQLGSTGQRQDPGRVFKGKKMPGHLGNDKVTCEAIQIYR 326 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 +D R LI +KG VPG S + +RDS+K+ K Sbjct: 327 IDAVRQLIYIKGSVPGKP-GSIVYLRDSWKAQKKNK 361 >gi|34581369|ref|ZP_00142849.1| 50S ribosomal protein L3 [Rickettsia sibirica 246] gi|28262754|gb|EAA26258.1| 50S ribosomal protein L3 [Rickettsia sibirica 246] Length = 215 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 113/212 (53%), Positives = 163/212 (76%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G + K+ Sbjct: 1 MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPMR F++ +SPK KL EFR+ + + + + + +FT GQ VD+T TIGKGF Sbjct: 61 VTKPMRQVFANAKISPKTKLKEFRISAE-NFIDIAASLEVDHFTAGQFVDITATTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +VD +R LI+++G +PG KNS++ V+D+ K Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIKK 210 >gi|190572944|ref|YP_001970789.1| 50S ribosomal protein L3 [Stenotrophomonas maltophilia K279a] gi|194364534|ref|YP_002027144.1| 50S ribosomal protein L3 [Stenotrophomonas maltophilia R551-3] gi|254522293|ref|ZP_05134348.1| ribosomal protein L3 [Stenotrophomonas sp. SKA14] gi|226730572|sp|B4SKW3|RL3_STRM5 RecName: Full=50S ribosomal protein L3 gi|226730573|sp|B2FQ45|RL3_STRMK RecName: Full=50S ribosomal protein L3 gi|190010866|emb|CAQ44475.1| putative 50S ribosomal protein L3 [Stenotrophomonas maltophilia K279a] gi|194347338|gb|ACF50461.1| ribosomal protein L3 [Stenotrophomonas maltophilia R551-3] gi|219719884|gb|EED38409.1| ribosomal protein L3 [Stenotrophomonas sp. SKA14] Length = 216 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 97/210 (46%), Positives = 129/210 (61%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G V RK GM+ V+ +GR IPVT++ ++ +T++ +GY AVQV G + V+K Sbjct: 8 GFVGRKAGMSRVFTEDGRSIPVTLIEATPNRIAQIKTVETDGYSAVQVTVGARRAALVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P G F+ V + L+EFRV+ VG F VGQ+VDV G+T GKGF G Sbjct: 68 PEAGHFAKAKVEAGRGLWEFRVEDAQLGDFAVGGEVKADIFEVGQIVDVQGVTKGKGFQG 127 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHNF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + + +NLEVV V Sbjct: 128 TIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVKV 187 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +RGLI V+G VPGA ++VR + K+ Sbjct: 188 DVERGLIAVRGAVPGAAGGD-VIVRPASKA 216 >gi|256831827|ref|YP_003160554.1| 50S ribosomal protein L3 [Jonesia denitrificans DSM 20603] gi|256685358|gb|ACV08251.1| ribosomal protein L3 [Jonesia denitrificans DSM 20603] Length = 219 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 93/211 (44%), Positives = 128/211 (60%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 V+ +KLGMT V++ GR +PVTV+ ++ V RT+D +GY AVQV G+ + V+ Sbjct: 11 KAVLGKKLGMTQVWDEAGRLVPVTVVAVEPNVVTQIRTVDNDGYAAVQVATGQIDPRKVT 70 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F V+P++ + E R D +G + F G VDV G T GKGF+G Sbjct: 71 KPLKGHFEKAGVTPRRHVTEIRTS-DSGEYSLGQEVTVGVFEAGTKVDVIGTTKGKGFAG 129 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G A+HG +HR GS G P RVFK +MAGRMG +R+TV+NL V +V Sbjct: 130 VMKRHGFAGASASHGAHRNHRKPGSIGAAATPSRVFKGLRMAGRMGHDRMTVQNLTVHAV 189 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D +G +L+KG VPG K +LVR++ K A Sbjct: 190 DADKGYVLLKGAVPGP-KGGVVLVRNAVKGA 219 >gi|166368484|ref|YP_001660757.1| 50S ribosomal protein L3 [Microcystis aeruginosa NIES-843] gi|189042851|sp|B0JI03|RL3_MICAN RecName: Full=50S ribosomal protein L3 gi|166090857|dbj|BAG05565.1| 50S ribosomal protein L3 [Microcystis aeruginosa NIES-843] Length = 212 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 89/212 (41%), Positives = 123/212 (58%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT +++ G IPVTV+ C V +T +GY ++QVG K K Sbjct: 1 MSIGILGTKLGMTQIFDNKTGVAIPVTVVQAGPCPVTQVKTKKTDGYESIQVGYKTVKEK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP+ G + VSP + L E+R+ +D +G + F G LVDV G TIG+G Sbjct: 61 ALNKPLLGHLAKAGVSPLRHLIEYRL-EDASAYTLGQEITADIFQEGDLVDVAGTTIGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG KRHNF THG S +HR GSTG PGRVF K+MAG+ G +VT++ L V Sbjct: 120 FSGYQKRHNFKRGNMTHG-SKNHRLPGSTGAGTTPGRVFPGKRMAGQYGSTQVTIRKLSV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V +D +R LIL+KG VPG + + + + K Sbjct: 179 VKIDSERNLILIKGAVPGKP-GTLLNITPAKK 209 >gi|67458670|ref|YP_246294.1| 50S ribosomal protein L3 [Rickettsia felis URRWXCal2] gi|75536865|sp|Q4UMS9|RL3_RICFE RecName: Full=50S ribosomal protein L3 gi|67004203|gb|AAY61129.1| 50S ribosomal protein L3 [Rickettsia felis URRWXCal2] Length = 215 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 113/212 (53%), Positives = 164/212 (77%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G + K+ Sbjct: 1 MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGIKDKKISR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+ F++ +SPK KL EFR+ ++ + + + + YFT GQ VD+T TIGKGF Sbjct: 61 VTKPMKQVFANAKISPKTKLKEFRISEE-NFIDIAASLEVDYFTAGQFVDITATTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +VD +R LI+++G +PG KNS++ V+D+ K Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIKK 210 >gi|296827944|ref|XP_002851250.1| 54S ribosomal protein L9 [Arthroderma otae CBS 113480] gi|238838804|gb|EEQ28466.1| 54S ribosomal protein L9 [Arthroderma otae CBS 113480] Length = 303 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 104/215 (48%), Positives = 144/215 (66%), Gaps = 3/215 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GMT +Y+ G R P TVL LD QV+ H+TL+KNGY AVQVG+G K Sbjct: 76 LRTGALAIKKGMTAIYDPETGVRTPCTVLQLDGAQVISHKTLEKNGYCAVQVGSGFKSEK 135 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV++PM G FS+ VSPK + EFRV+ + LLPVG V + +F GQ VDV + G G Sbjct: 136 NVTRPMLGHFSTNGVSPKLYIHEFRVKDETGLLPVGEVINADWFQEGQYVDVRSNSRGMG 195 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+GAMK+ F G +HGVS++HRS GST Q G RV+ KKM GRMG ++VT+++L+ Sbjct: 196 FAGAMKKWGFHGQDRSHGVSLTHRSLGSTAPSQGGGSRVYPGKKMPGRMGNHQVTLQSLK 255 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V+ VD ++G+++VKG V G K + ++D+ K Sbjct: 256 VLKVDAEKGIVVVKGSVAGPKGRC-VKIQDAIKKP 289 >gi|19704966|ref|NP_602461.1| 50S ribosomal protein L3 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|42559658|sp|Q8RIF5|RL3_FUSNN RecName: Full=50S ribosomal protein L3 gi|19712868|gb|AAL93760.1| LSU ribosomal protein L3P [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 211 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 90/212 (42%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT ++ +G+ +PVTV+ V+ +T +K+GY+A+Q+G E K KN + Sbjct: 2 SGILGKKIGMTQIF-EDGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ V P++ + E V+ D +G T VD+TG + GKG SG Sbjct: 61 KPLMGIFNKAGVKPQRFVKELEVESVDG-YELGQEIKVDVLTEVGYVDITGTSKGKGTSG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MK+H F G RA+HGVS +HR GS G PG+V K KKMAG+ G VTV+NL+VV V Sbjct: 120 VMKKHGFSGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKKMAGQHGNATVTVQNLKVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D + L+L+KG VPGA KNS+++++ + K + Sbjct: 180 DAEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210 >gi|227530205|ref|ZP_03960254.1| ribosomal protein L3 [Lactobacillus vaginalis ATCC 49540] gi|227349880|gb|EEJ40171.1| ribosomal protein L3 [Lactobacillus vaginalis ATCC 49540] Length = 220 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 80/212 (37%), Positives = 123/212 (58%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY AVQ+G + + Sbjct: 1 MAKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQIKTVENDGYNAVQLGFDDKREIL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + E R + D + VG F G+ VDVTG+T G G+ Sbjct: 61 SNKPEQGHAAKANTTPKRFIGEIRDAELGDDIKVGDEVKADVFNEGETVDVTGVTKGHGY 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G + + N +HG S HR GS G RVFK K+ GRMGG VT+++LEVV Sbjct: 121 QGNIHKDNQSRGPMSHG-SRYHRRPGSLGPI--INRVFKGMKLPGRMGGKTVTMQHLEVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++L+KG VPGA K S++ +++S K+ Sbjct: 178 KVDLDNNVLLIKGNVPGANK-SYVTIKNSVKA 208 >gi|237717399|ref|ZP_04547880.1| 50S ribosomal protein L3 [Bacteroides sp. D1] gi|262406164|ref|ZP_06082714.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_22] gi|294644059|ref|ZP_06721836.1| 50S ribosomal protein L3 [Bacteroides ovatus SD CC 2a] gi|294807315|ref|ZP_06766128.1| 50S ribosomal protein L3 [Bacteroides xylanisolvens SD CC 1b] gi|298483064|ref|ZP_07001245.1| 50S ribosomal protein L3 [Bacteroides sp. D22] gi|229443382|gb|EEO49173.1| 50S ribosomal protein L3 [Bacteroides sp. D1] gi|262357039|gb|EEZ06129.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_22] gi|292640583|gb|EFF58824.1| 50S ribosomal protein L3 [Bacteroides ovatus SD CC 2a] gi|294445480|gb|EFG14134.1| 50S ribosomal protein L3 [Bacteroides xylanisolvens SD CC 1b] gi|295085428|emb|CBK66951.1| LSU ribosomal protein L3P [Bacteroides xylanisolvens XB1A] gi|298270808|gb|EFI12388.1| 50S ribosomal protein L3 [Bacteroides sp. D22] Length = 205 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 84/204 (41%), Positives = 125/204 (61%), Gaps = 4/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PK+ L EF+ + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKRAGVTPKRHLAEFK--EFETELNLGDTITVEMFNDASFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG +ATHG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 L+LVKG +PG K S +L+ Sbjct: 181 IADHNLLLVKGSIPGC-KGSIVLI 203 >gi|289550143|ref|YP_003471047.1| LSU ribosomal protein L3p (L3e) [Staphylococcus lugdunensis HKU09-01] gi|289179675|gb|ADC86920.1| LSU ribosomal protein L3p (L3e) [Staphylococcus lugdunensis HKU09-01] Length = 220 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 92/221 (41%), Positives = 122/221 (55%), Gaps = 11/221 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG + + Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60 Query: 61 V--------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 +KP G +PK+ + EFR D+ VG S F G ++DVT Sbjct: 61 KDAKSNKYATKPAEGHAKKAGTAPKRFIREFRNVNVDE-YEVGQEVSVDTFEAGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH HG HR+ GS G D RVFK +K GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMAHGSH-FHRAPGSVGMASDASRVFKGQKAPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 TV+NLEVV VD + G+ILVKG VPGAKK + ++ S K Sbjct: 179 TVQNLEVVQVDTENGVILVKGNVPGAKKG-LVEIKSSIKKG 218 >gi|242765739|ref|XP_002341035.1| 50S ribosomal protein L3 [Talaromyces stipitatus ATCC 10500] gi|218724231|gb|EED23648.1| 50S ribosomal protein L3 [Talaromyces stipitatus ATCC 10500] Length = 300 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 101/215 (46%), Positives = 140/215 (65%), Gaps = 3/215 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G++A K GMT +Y+ G+R P TVL LD CQV+ H+T+DK+GY AVQVGAG K + Sbjct: 72 LRTGLLAIKKGMTGLYDPETGKRTPCTVLQLDRCQVISHKTMDKHGYFAVQVGAGFKKPE 131 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++K + G FS V+PK+ + EFRV+ + LL +G + +F VGQ VD T GKG Sbjct: 132 RLTKALVGHFSVNEVAPKRYVHEFRVKDGNGLLEIGHTLTADWFQVGQYVDARSNTKGKG 191 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKRH F G +HGVS++HRS GS G Q G RV+ KKMAG MG + T++NL+ Sbjct: 192 FAGVMKRHGFHGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNVQNTLQNLK 251 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V+ VD G+I+V G V G K + ++D+ K Sbjct: 252 VLEVDPANGIIVVNGSVSGP-KGCLVKLQDALKKP 285 >gi|254422678|ref|ZP_05036396.1| ribosomal protein L3 [Synechococcus sp. PCC 7335] gi|196190167|gb|EDX85131.1| ribosomal protein L3 [Synechococcus sp. PCC 7335] Length = 212 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 90/209 (43%), Positives = 124/209 (59%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT V++ G IPVTV+ C V +T +GY +VQ+G GE K K Sbjct: 1 MSVGILGTKLGMTQVFDETGNAIPVTVIQAGPCVVTQIKTEKTDGYSSVQIGYGEVKEKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G SP + L E+RV D +G + F GQ +DV+G++IGKGF Sbjct: 61 LNRPKLGHLKKSGASPLRHLREYRVS-DTGEFELGQALAADRFEAGQTIDVSGISIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KR+NF +HG S +HR+ GSTG PGRV+ KKMAGRMG +VT++ L VV Sbjct: 120 AGNQKRNNFRRGPMSHG-SKNHRAPGSTGAGTTPGRVYPGKKMAGRMGSEKVTIRKLSVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VD R L+LVKG VPG K + + + + Sbjct: 179 RVDSDRNLLLVKGGVPG-KAGTLLNITPA 206 >gi|196019520|ref|XP_002118992.1| hypothetical protein TRIADDRAFT_35046 [Trichoplax adhaerens] gi|190577417|gb|EDV18523.1| hypothetical protein TRIADDRAFT_35046 [Trichoplax adhaerens] Length = 217 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 104/214 (48%), Positives = 150/214 (70%), Gaps = 2/214 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A+K+GMT ++ G IPVT++ +D V+ +T +KNGY VQ+ A + K + + Sbjct: 5 RTGLIAKKVGMTQIFKENGEVIPVTMILVDENIVLSVKTKEKNGYNGVQLAAFDQKPQRL 64 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SK ++G F +S KKK+ EF V ++ +LL VG ++F Q VD+TG++IGKG++ Sbjct: 65 SKSVKGSFEKAKISAKKKMKEFIVHEN-NLLKVGDKVDVNHFKKNQYVDITGISIGKGYA 123 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF GL ATHGVSISHRS GSTG QDPGRVFK KKMAG+MG +VT +N++V+ Sbjct: 124 GTMKRHNFKGLEATHGVSISHRSAGSTGQCQDPGRVFKGKKMAGQMGNKKVTTQNIKVID 183 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +D + L++VKG VPG N ++ ++D+ K AV Sbjct: 184 IDSELNLLIVKGAVPGCN-NGYLYIKDAIKKAVP 216 >gi|297567284|ref|YP_003686256.1| 50S ribosomal protein L3 [Meiothermus silvanus DSM 9946] gi|296851733|gb|ADH64748.1| 50S ribosomal protein L3 [Meiothermus silvanus DSM 9946] Length = 212 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 101/216 (46%), Positives = 130/216 (60%), Gaps = 7/216 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ K+GMT V+ R +PVTV+ C VV RT DK+GY AVQ+G K + V+ Sbjct: 2 KGILGTKIGMTQVW-KNDRAVPVTVILAGPCPVVQRRTPDKDGYEAVQLGFRPQKAQRVN 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F+ V P + L E R P G + F G+ VDVTG + G+GF G Sbjct: 61 KPLKGHFAKAGVEPVRYLKEIR-----GFSPEGDTVTVEIFAAGEKVDVTGTSKGRGFQG 115 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKR NF G ATHG HR GS G R+ PGRV+K KKMAGRMGG RVTV+NLEVV V Sbjct: 116 VMKRWNFAGGNATHGAHKVHRHPGSIGNRKTPGRVYKGKKMAGRMGGERVTVQNLEVVDV 175 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 + LILVKG VPGA + ++VR++ ++ G Sbjct: 176 VPEENLILVKGAVPGAN-GTLVVVRETVRTPAKQGG 210 >gi|197117323|ref|YP_002137750.1| 50S ribosomal protein L3 [Geobacter bemidjiensis Bem] gi|226725180|sp|B5EFQ0|RL3_GEOBB RecName: Full=50S ribosomal protein L3 gi|197086683|gb|ACH37954.1| ribosomal protein L3 [Geobacter bemidjiensis Bem] Length = 211 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 89/212 (41%), Positives = 123/212 (58%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT ++ +GRRI VTV+ C VV +++ K+GY A+QVG G Sbjct: 1 MNKGLIGKKLGMTQIFAEDGRRIAVTVVEAGPCVVVQKKSVAKDGYSAIQVGFGAKDASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + G E R+ D +G V + F G LVDVTG +IGKGF Sbjct: 61 ANAAQVGHCKGAGAGVFTHYRELRMDNTDA-YKLGDVIEAAVFEEGDLVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR F G R++HG S HR+ GS GC P RVFKNKKM G++G +VTV+ L+VV Sbjct: 120 AGVIKRWGFKGGRSSHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQLGNEKVTVQRLKVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD LIL+ G +PG+ N +L++DS K+ Sbjct: 179 RVDAADNLILLGGAIPGSA-NGVVLIKDSVKA 209 >gi|317507409|ref|ZP_07965143.1| 50S ribosomal protein L3 [Segniliparus rugosus ATCC BAA-974] gi|316254294|gb|EFV13630.1| 50S ribosomal protein L3 [Segniliparus rugosus ATCC BAA-974] Length = 212 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 90/212 (42%), Positives = 121/212 (57%), Gaps = 2/212 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ R +PVTV+ V RT +++ Y AVQ+ G+ + V+ Sbjct: 1 MGLLGAKLGMTQVFDERNRVVPVTVIRTGVNIVTQIRTPERDKYSAVQLAFGQIDPRKVN 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F V+P++ L E R+ +D VG S F G LVDVTG + GKGF+G Sbjct: 61 KPLTGQFEKAGVTPRRHLAELRL-EDVSGYEVGQQLDVSVFADGDLVDVTGTSKGKGFAG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G A HG HR GS G PGRVFK +MAGRMG + T +NL V V Sbjct: 120 TMKRHGFKGQGAAHGAHKVHRRPGSIGACAFPGRVFKGTRMAGRMGNAKTTTQNLTVFRV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D + G++L+KG VPG + + VR + K V Sbjct: 180 DPEAGVLLIKGAVPG-RDGGLVFVRSAVKKGV 210 >gi|296130495|ref|YP_003637745.1| 50S ribosomal protein L3 [Cellulomonas flavigena DSM 20109] gi|296022310|gb|ADG75546.1| 50S ribosomal protein L3 [Cellulomonas flavigena DSM 20109] Length = 219 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 91/211 (43%), Positives = 127/211 (60%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 + ++ KLGMT V++ GR +PVTVL + V R+ + +GY AVQ+ G+ + V+ Sbjct: 11 TALLGTKLGMTQVWDEAGRLVPVTVLAVGTNVVTQVRSAESDGYAAVQLAYGQIDPRKVT 70 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F V+P++ + E R + +G + F GQ+VDVTG T GKG +G Sbjct: 71 KPLKGHFEKAGVTPRRHVAEIRTSNAAEFT-LGQEITAGAFEAGQVVDVTGTTKGKGTAG 129 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G P RVFK KMAGRMG R T +NL V +V Sbjct: 130 VMKRHGFHGVGASHGAHRNHRKPGSIGGASTPSRVFKGLKMAGRMGVARQTTQNLTVHAV 189 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+LVKG VPG K ++VR + K A Sbjct: 190 DAEKGLLLVKGAVPGP-KGGVVVVRSAVKGA 219 >gi|169830436|ref|YP_001716418.1| ribosomal protein L3 [Candidatus Desulforudis audaxviator MP104C] gi|212288256|sp|B1I1I8|RL3_DESAP RecName: Full=50S ribosomal protein L3 gi|169637280|gb|ACA58786.1| ribosomal protein L3 [Candidatus Desulforudis audaxviator MP104C] Length = 213 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 126/212 (59%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RKLGM+ + EG +PVT++ C VV +T D +GY AVQ+G E K Sbjct: 4 MAKGILGRKLGMSRFFTAEGVAVPVTLIEAGPCTVVQKKTPDTDGYSAVQLGFMEQPAKR 63 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++P++G F V P + L E RV D VG V F VG++VDV G + GKGF Sbjct: 64 VNRPLKGHFGRAGVKPSRFLRELRVADAAD-YEVGQVLKADLFDVGEIVDVVGTSKGKGF 122 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH F HG S HR G+ + P RVFK +K+ GR+GG RVTV+NLE+V Sbjct: 123 AGGIKRHGFHRGPMGHG-SKYHRRPGAL-AAKGPARVFKGRKLPGRLGGVRVTVQNLEIV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+ V+G VPG + S ++V+ + K Sbjct: 181 KVDPERNLLAVRGAVPG-IRGSLVVVKSAVKG 211 >gi|296329220|ref|ZP_06871721.1| 50S ribosomal protein L3 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296153576|gb|EFG94393.1| 50S ribosomal protein L3 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 211 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 90/212 (42%), Positives = 134/212 (63%), Gaps = 3/212 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT ++ +G+ +PVTV+ V+ +T +K+GY+A+Q+G E K KN + Sbjct: 2 SGILGKKIGMTQIF-EDGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ V P++ + E V+ D +G T VD+TG + GKG SG Sbjct: 61 KPLMGIFNKAGVKPQRFVKELEVESVDG-YELGQEIKVDVLTEVGYVDITGTSKGKGTSG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MK+H F G RA+HGVS +HR GS G PG+V K KKMAG+ G VTV+NL+VV V Sbjct: 120 VMKKHGFAGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKKMAGQHGNATVTVQNLKVVKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D + L+L+KG VPGA KNS+++++ + K + Sbjct: 180 DAEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210 >gi|270291133|ref|ZP_06197356.1| 50S ribosomal protein L3 [Pediococcus acidilactici 7_4] gi|304385414|ref|ZP_07367759.1| 50S ribosomal protein L3 [Pediococcus acidilactici DSM 20284] gi|270280529|gb|EFA26364.1| 50S ribosomal protein L3 [Pediococcus acidilactici 7_4] gi|304328621|gb|EFL95842.1| 50S ribosomal protein L3 [Pediococcus acidilactici DSM 20284] Length = 212 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 79/214 (36%), Positives = 118/214 (55%), Gaps = 4/214 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 G++ +K+GMT V+ G IPVTV+ V+ +T++ +GY A Q+G + + Sbjct: 3 TKGILGKKVGMTQVFTEAGELIPVTVIDTTPNVVLQLKTVENDGYAAAQLGFDDKRQVLS 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP +G + N +PK+ + E R + + + VG + F G VDVTG T G GF Sbjct: 63 NKPEQGHVAKANTNPKRFIHEIRDVELGEDVKVGDKIAADIFEAGDFVDVTGTTKGHGFQ 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +K+ HG S HR GS G RVF KK+ GRMG VT++NLE+V Sbjct: 123 GVIKKDGQRRGPMAHG-SRYHRRPGSLGAI--INRVFPGKKLPGRMGNKTVTIQNLEIVK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D + ++LVKG VPGAKK S+++V+ + K+ Sbjct: 180 ADTENNVLLVKGNVPGAKK-SYVVVKSTVKNTSK 212 >gi|87124962|ref|ZP_01080809.1| 50S ribosomal protein L3 [Synechococcus sp. RS9917] gi|86167282|gb|EAQ68542.1| 50S ribosomal protein L3 [Synechococcus sp. RS9917] Length = 218 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 79/216 (36%), Positives = 128/216 (59%), Gaps = 3/216 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +G+ +PVT++ C++ +T + +GY AVQ+G G+ + K Sbjct: 1 MSIGILGKKLGMSQLFDEQGKAVPVTLIEAGPCRITQLKTTETDGYAAVQIGFGDTREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G + + L E+RV D L +G + F GQ VDV+G ++G+GF Sbjct: 61 VNKPAKGHLAKSGEELLRHLSEYRVD-DVAGLELGGAITVGDFEAGQKVDVSGDSMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F THG S +HR GSTG PGR++ K+MAGR GG ++T + L ++ Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLTIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 +D +R L++VKG VPG S + +R + + Sbjct: 179 KIDSERNLLVVKGSVPGKP-GSLLNIRPANRVGAKP 213 >gi|318042564|ref|ZP_07974520.1| 50S ribosomal protein L3 [Synechococcus sp. CB0101] Length = 215 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 86/216 (39%), Positives = 127/216 (58%), Gaps = 3/216 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ EGR IPVTV+ C++ +T +GY AVQ+G G+ + K Sbjct: 1 MSIGILGKKLGMSQFFDDEGRSIPVTVIEAGPCRITQLKTDSTDGYTAVQLGFGDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G + P + L E+RV D L +G + + F GQ VDV+G TIG+GF Sbjct: 61 VNKPAKGHLAKSGSEPLRHLKEYRVD-TVDGLELGGAITVAAFEAGQKVDVSGDTIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F THG S +HR GSTG PGRV+ K+MAGR GG ++T + L ++ Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRVYPGKRMAGRYGGKQITTRGLVIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 VD +R L++VKG VPG + + + + + Sbjct: 179 KVDAERNLLVVKGSVPGKP-GALLNILPAKRVGAKA 213 >gi|304405616|ref|ZP_07387275.1| 50S ribosomal protein L3 [Paenibacillus curdlanolyticus YK9] gi|304345655|gb|EFM11490.1| 50S ribosomal protein L3 [Paenibacillus curdlanolyticus YK9] Length = 207 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 84/210 (40%), Positives = 120/210 (57%), Gaps = 4/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GMT V+ EG +PVTV+ V+ + + +GY AVQ+G + K KN + Sbjct: 2 KGILGKKIGMTQVFTAEGNVVPVTVIEAGPNVVLQKKDQENDGYEAVQLGFVDKKEKNST 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP +G N +PK+ + E R + VG V FT G+ VDVTG++ GKGF G Sbjct: 62 KPAQGHAKKANTAPKRYIREIRGINLGE-YEVGQVIKADVFTAGEFVDVTGVSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR +HG S HR GS G Q RV K K++ G MG +T++NLEVV V Sbjct: 121 VIKRWGQSTGPMSHG-SRYHRGPGSMGSIQ-ANRVPKGKRLPGHMGSETITIQNLEVVRV 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R +ILVKG +PG KN+ + V+ + K Sbjct: 179 DAERNVILVKGSIPGP-KNALVKVKLTVKK 207 >gi|258543821|ref|ZP_05704055.1| 50S ribosomal protein L3 [Cardiobacterium hominis ATCC 15826] gi|258520910|gb|EEV89769.1| 50S ribosomal protein L3 [Cardiobacterium hominis ATCC 15826] Length = 216 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 94/213 (44%), Positives = 132/213 (61%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V +K+GMT ++N +G VTV+ + + +TL +GY AVQV GE K Sbjct: 5 MTMGLVGQKIGMTRIFNEDGSACAVTVIEVKPNIISQIKTLATDGYNAVQVSVGERKTNR 64 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQ-KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 SK + G F+ NV+ + EFR+ +D +GS S F+ GQ VDV G ++GKG Sbjct: 65 TSKGLAGHFAKANVAAGVVIKEFRIAAEDVAQFSLGSAVDVSLFSEGQRVDVRGRSVGKG 124 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRH+F G R THG S+SHR GS G Q PGRVFK KKM+G +G + +NLE+ Sbjct: 125 FAGTIKRHHFSGQRKTHGNSLSHRVPGSIGQNQTPGRVFKGKKMSGHLGNKMRSTQNLEI 184 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +R L+L+KG VPGA K ++++R S K+ Sbjct: 185 ARVDGERNLLLIKGAVPGA-KGGFVVIRPSVKA 216 >gi|51473839|ref|YP_067596.1| 50S ribosomal protein L3 [Rickettsia typhi str. Wilmington] gi|81826293|sp|Q68W78|RL3_RICTY RecName: Full=50S ribosomal protein L3 gi|51460151|gb|AAU04114.1| 50S ribosomal protein L3 [Rickettsia typhi str. Wilmington] Length = 215 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 115/213 (53%), Positives = 165/213 (77%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+K+GMT V+N +G RI +T++ +D CQVV H+TL K+GY A+ +G + K+ Sbjct: 1 MRTGIIAQKIGMTSVFNDKGERISLTLVKVDGCQVVGHKTLAKHGYNALVIGVKDQKISR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+ F++ +SPK KL EFR+ +D + + + S+ +F+VGQ VD+T TIGKGF Sbjct: 61 VTKPMKQVFANAKISPKTKLKEFRISED-NFIDIASILEVDHFSVGQFVDITATTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++D R LI+++G +PG KNS++LV+D+ K A Sbjct: 180 AIDTNRKLIMIQGSIPG-HKNSYLLVKDAIKKA 211 >gi|310779596|ref|YP_003967929.1| LSU ribosomal protein L3P [Ilyobacter polytropus DSM 2926] gi|309748919|gb|ADO83581.1| LSU ribosomal protein L3P [Ilyobacter polytropus DSM 2926] Length = 208 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 88/209 (42%), Positives = 125/209 (59%), Gaps = 3/209 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++A+K+GMT ++ G+ +PVTV+ V+ +T +K+GY A+Q+G E K KN +K Sbjct: 3 GILAKKIGMTQIF-ENGKFVPVTVVEAGPNFVLQKKTEEKDGYTALQLGFDEKKEKNTTK 61 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 PM G F+ V P + + E + + +G + VD+ G + GKG +G Sbjct: 62 PMMGIFNKAGVKPLRFVRELKADS-VEGYELGQEIKVDILDGVEFVDIKGTSKGKGTAGV 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF G RATHGVS +HR GS G P +V K KMAGR G VTV+NL+VV VD Sbjct: 121 MKRHNFSGNRATHGVSRNHRLGGSIGQSSFPSKVLKGLKMAGRYGNAAVTVQNLKVVKVD 180 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + L+L+KG VPG KN +I+V+ + K Sbjct: 181 VENNLLLIKGAVPGP-KNGYIVVKPAIKK 208 >gi|308233852|ref|ZP_07664589.1| LSU ribosomal protein L3P [Atopobium vaginae DSM 15829] gi|328943560|ref|ZP_08241025.1| 50S ribosomal protein L3 [Atopobium vaginae DSM 15829] gi|327491529|gb|EGF23303.1| 50S ribosomal protein L3 [Atopobium vaginae DSM 15829] Length = 206 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 88/209 (42%), Positives = 122/209 (58%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M + ++ RK+GMT V++ +PVTV+ C V +T +GY AVQ+G G+ K K+ Sbjct: 1 MVTTILGRKIGMTQVWDENDNIVPVTVIQAGPCTVSQVKTKATDGYDAVQIGFGDIKAKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP+ G F + NV P + L E RV+ +D G V + F VDV G + GKGF Sbjct: 61 VNKPLAGHFKAHNVEPARYLAEVRVENGEDH-KCGDVVTVKDFADVAAVDVIGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF HG S + R GS G P RV K MAG MG RVTVKNL++V Sbjct: 120 QGTIKRWNFSCGPKAHG-SRNQREPGSIGQCSYPARVRKGLHMAGHMGDERVTVKNLKLV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +D+++ L+LVKG VPG KN+ + +R + Sbjct: 179 RIDEEQNLMLVKGAVPGG-KNALVSIRMA 206 >gi|302498268|ref|XP_003011132.1| hypothetical protein ARB_02654 [Arthroderma benhamiae CBS 112371] gi|291174680|gb|EFE30492.1| hypothetical protein ARB_02654 [Arthroderma benhamiae CBS 112371] gi|326474709|gb|EGD98718.1| 50S ribosomal protein L3 [Trichophyton tonsurans CBS 112818] gi|326484840|gb|EGE08850.1| 50S ribosomal protein L3 [Trichophyton equinum CBS 127.97] Length = 304 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 101/215 (46%), Positives = 144/215 (66%), Gaps = 3/215 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GMT +Y+ G R P TVL LD QV+ H+T +KNGY AVQVG+G + Sbjct: 77 LRTGALAIKKGMTAIYDPETGVRTPCTVLQLDGAQVISHKTFEKNGYCAVQVGSGLKNER 136 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV++PM G FS+ VSPK+ + EFRV+ + LLP+G V + +F GQ VDV + G G Sbjct: 137 NVTRPMLGHFSANGVSPKRHIHEFRVKDETGLLPIGEVINADWFQEGQYVDVRSNSRGMG 196 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+GAMK+ F G +HGVS++HRS GST Q G RV+ KKM GRMG ++VT+++L+ Sbjct: 197 FAGAMKKWGFHGQDRSHGVSLTHRSLGSTAPSQGGGSRVYPGKKMPGRMGNHQVTLQSLK 256 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V+ VD ++G+++VKG V G K + ++D+ K Sbjct: 257 VLKVDAEKGIVVVKGGVAGPKGRC-VKIQDAIKKP 290 >gi|323700806|ref|ZP_08112718.1| 50S ribosomal protein L3 [Desulfovibrio sp. ND132] gi|323460738|gb|EGB16603.1| 50S ribosomal protein L3 [Desulfovibrio desulfuricans ND132] Length = 210 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 86/204 (42%), Positives = 120/204 (58%), Gaps = 2/204 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT ++ +G PVTV+ C V+ +T DK GY A+Q+G + V+K Sbjct: 6 GLLGRKLGMTRIFKSDGTICPVTVIEAGPCAVMQIKTTDKEGYNALQLGYDTVPERKVNK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 PM+G + + + L EF ++ D +G + F G+ V VTG + GKGF G Sbjct: 66 PMKGHMAKAGDALYRHLKEFPLEVVDG-YELGQEITVDIFAAGEKVKVTGTSKGKGFQGV 124 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF G RA+HG HR GS G PGRV+K K+MAG MG RVT+ N+E+V V Sbjct: 125 MKRHNFNGSRASHGAEKVHRVPGSVGNATYPGRVWKGKRMAGHMGSERVTLSNVEIVDVR 184 Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207 + ++LVKG VPG N +++R Sbjct: 185 PEDNVLLVKGQVPGPN-NGLVMIR 207 >gi|29348136|ref|NP_811639.1| 50S ribosomal protein L3 [Bacteroides thetaiotaomicron VPI-5482] gi|253569590|ref|ZP_04847000.1| 50S ribosomal protein L3 [Bacteroides sp. 1_1_6] gi|298386181|ref|ZP_06995738.1| 50S ribosomal protein L3 [Bacteroides sp. 1_1_14] gi|42559628|sp|Q8A476|RL3_BACTN RecName: Full=50S ribosomal protein L3 gi|29340039|gb|AAO77833.1| 50S ribosomal protein L3 [Bacteroides thetaiotaomicron VPI-5482] gi|251841609|gb|EES69690.1| 50S ribosomal protein L3 [Bacteroides sp. 1_1_6] gi|298261409|gb|EFI04276.1| 50S ribosomal protein L3 [Bacteroides sp. 1_1_14] Length = 205 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 82/204 (40%), Positives = 125/204 (61%), Gaps = 4/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PK+ L EF+ + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKRAGVTPKRHLAEFK--EFETELNLGDTITVEMFNDATFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG +ATHG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 L+L+KG +PG K S +++ Sbjct: 181 IADHNLLLIKGSIPGC-KGSIVII 203 >gi|324528045|gb|ADY48869.1| 50S ribosomal protein L3 [Ascaris suum] Length = 231 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 81/221 (36%), Positives = 125/221 (56%), Gaps = 6/221 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RKLGM+ ++ +G IPVT++ ++ + +T + +GY A+Q+G + K K+ Sbjct: 1 MMKGLVGRKLGMSQMFATDGTIIPVTMIEIEPNVITQIKTTETDGYNAIQIGVEDKKQKH 60 Query: 61 VSKPMRGFFSSVNVS-PKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 ++P G + K+ EF V +D+ +G + F+ G++VDV G + GK Sbjct: 61 TTQPEMGHVKKAGLETGKRVYKEFTVGEDEVSNYTLGQELTVDIFSDGEIVDVQGTSKGK 120 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF GA+KRHN +HG S HR GS G VFK K + G MG VT +NLE Sbjct: 121 GFQGAIKRHNQSRGPMSHG-SRYHRRPGSMGAVAPQ--VFKGKNLPGHMGSKTVTTQNLE 177 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 +V VD KR ++++KG VPGAKK S++ ++ + K + K Sbjct: 178 IVKVDTKRNVLIIKGNVPGAKK-SFVTIKAAVKGNGRAQNK 217 >gi|221194518|ref|ZP_03567575.1| 50S ribosomal protein L3 [Atopobium rimae ATCC 49626] gi|221185422|gb|EEE17812.1| 50S ribosomal protein L3 [Atopobium rimae ATCC 49626] Length = 206 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 87/209 (41%), Positives = 119/209 (56%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M + ++ RKLGMT V++ +PVTV+ C V +T + +GY AVQ+G G+ K+ Sbjct: 1 MVNTILGRKLGMTQVWDENDNVVPVTVILAGPCTVSQVKTAETDGYDAVQIGFGDISEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM G F + V P + L E RV + G + + F+ VDV G + GKGF Sbjct: 61 VNKPMAGHFKAQGVEPMRYLREVRV-PAGEEHKCGDTVTVADFSEVTAVDVIGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF THG S + R GS G P RV K M G MG RVTVKNL++V Sbjct: 120 QGTIKRWNFSRGPMTHG-SRNQRRPGSIGQCAYPARVRKGLHMYGHMGAERVTVKNLKLV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VD ++ L+L+KG VPG KN+ + VR + Sbjct: 179 RVDAEQNLMLIKGAVPGG-KNALVQVRMA 206 >gi|34811555|pdb|1PNU|B Chain B, Crystal Structure Of A Streptomycin Dependent Ribosome From Escherichia Coli, 50s Subunit Of 70s Ribosome. This File, 1pnu, Contains Only Molecules Of The 50s Ribosomal Subunit. The 30s Subunit, Mrna, P-Site Trna, And A-Site Trna Are In The Pdb File 1pns. gi|34811608|pdb|1PNY|B Chain B, Crystal Structure Of The Wild Type Ribosome From E. Coli, 50s Subunit Of 70s Ribosome. This File, 1pny, Contains Only Molecules Of The 50s Ribosomal Subunit. The 30s Subunit Is In The Pdb File 1pnx. gi|56966347|pdb|1VOR|E Chain E, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966400|pdb|1VOU|E Chain E, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966453|pdb|1VOW|E Chain E, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966506|pdb|1VOY|E Chain E, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966559|pdb|1VP0|E Chain E, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400 Length = 205 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 89/211 (42%), Positives = 122/211 (57%), Gaps = 7/211 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ K+GMT ++ R IPVTV+ C +V +T +GY AVQ+G + V+ Sbjct: 2 KGILGTKIGMTQIW-KNDRAIPVTVVLAGPCPIVQRKTAQTDGYEAVQIGYAPKAERKVN 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KPM+G F+ V+P + L EFR P G + F G+ +D TG + GKG G Sbjct: 61 KPMQGHFAKAGVAPTRILREFR-----GFAPDGDSVNVDIFAEGEKIDATGTSKGKGTQG 115 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKR NF G A+HG HR GS G R+ PGRV+K K+MAG MG RVTV+NLEVV + Sbjct: 116 VMKRWNFAGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGHMGMERVTVQNLEVVEI 175 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 LILVKG +PGA +++R + K++ Sbjct: 176 RAGENLILVKGAIPGAN-GGLVVLRSAAKAS 205 >gi|222150445|ref|YP_002559598.1| 50S ribosomal protein L3 [Macrococcus caseolyticus JCSC5402] gi|254803679|sp|B9E9J1|RL3_MACCJ RecName: Full=50S ribosomal protein L3 gi|222119567|dbj|BAH16902.1| 50S ribosomal protein L3 [Macrococcus caseolyticus JCSC5402] Length = 220 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 86/221 (38%), Positives = 121/221 (54%), Gaps = 11/221 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY ++Q+G + + Sbjct: 1 MTKGILGRKVGMTQVFGENGELIPVTVVEAAQNVVLQKKTEEVDGYSSIQIGFEDKQAYK 60 Query: 61 V--------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 +KP G +PK+ + EFR D + VG + F G +VDVT Sbjct: 61 ADRKSNKFATKPAEGHAKKAGTAPKRFIREFR-NVDTEAYEVGQEVTVDTFQTGDIVDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH +HG S HR GS G D +VFK K + GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQSRGPMSHG-SRYHRRPGSMGMASDASKVFKGKALPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 T++NLE+V VD + +ILVKG VPG KK + ++ S K Sbjct: 179 TMQNLEIVKVDAENNVILVKGNVPGPKKG-LVKIQTSIKKG 218 >gi|319796217|ref|YP_004157857.1| 50S ribosomal protein l3 [Variovorax paradoxus EPS] gi|315598680|gb|ADU39746.1| 50S ribosomal protein L3 [Variovorax paradoxus EPS] Length = 226 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 86/215 (40%), Positives = 127/215 (59%), Gaps = 3/215 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G +PVTV+ + N +V ++ + +GY+A+QV G K V+K Sbjct: 8 GLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQIKSQETDGYVALQVTFGSRKASRVTK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121 P G + V + + EFRV + G V + S F+VGQ VDV G +IGKGF+ Sbjct: 68 PEAGHLAKAGVEAGEIIQEFRVTAETAGQHKAGGVIAAGSVFSVGQKVDVQGTSIGKGFA 127 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHN RA+HG S SH GS G QDPGRVF K+M G +G T +NL+V Sbjct: 128 GTIKRHNMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTKTTQNLDVFR 187 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 +D+ R L+L+KG +PG+ K ++ VR + K+ Sbjct: 188 IDEARQLLLIKGAIPGS-KGGFVTVRPAIKAKPQA 221 >gi|219681870|ref|YP_002468256.1| 50S ribosomal protein L3 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682425|ref|YP_002468809.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471575|ref|ZP_05635574.1| 50S ribosomal protein L3 [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|254803660|sp|B8D9U7|RL3_BUCA5 RecName: Full=50S ribosomal protein L3 gi|254803661|sp|B8D849|RL3_BUCAT RecName: Full=50S ribosomal protein L3 gi|219622158|gb|ACL30314.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624713|gb|ACL30868.1| 50S ribosomal protein L3 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311086246|gb|ADP66328.1| 50S ribosomal protein L3 [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086823|gb|ADP66904.1| 50S ribosomal protein L3 [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087410|gb|ADP67490.1| 50S ribosomal protein L3 [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087905|gb|ADP67984.1| 50S ribosomal protein L3 [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 209 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 91/209 (43%), Positives = 134/209 (64%), Gaps = 2/209 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ EG IPVTV+ L ++ + ++ + Y A+QV G K ++ Sbjct: 2 IGLVGKKIGMTRIFTEEGTSIPVTVIELKENRITQVKNINTDLYCAIQVTTGIKKSNRLN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P + L+EFR K+++ +G + + F + VD+TG++ GKGFSG Sbjct: 62 KPQSGHFLKSGVTPGRGLWEFRTDKNNNF-KIGQSITINIFNNVKKVDITGISKGKGFSG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG++G RVTV++L +V + Sbjct: 121 TVKRWNFHTQDATHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGQLGNTRVTVQSLNIVRI 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D++R L+LVKG VPGA S ++V+ + K Sbjct: 181 DERRNLLLVKGAVPGA-TGSDLIVKPAIK 208 >gi|134103264|ref|YP_001108925.1| 50S ribosomal protein L3 [Saccharopolyspora erythraea NRRL 2338] gi|291007943|ref|ZP_06565916.1| 50S ribosomal protein L3 [Saccharopolyspora erythraea NRRL 2338] gi|166234589|sp|A4FPM5|RL3_SACEN RecName: Full=50S ribosomal protein L3 gi|133915887|emb|CAM06000.1| 50S ribosomal protein L3 [Saccharopolyspora erythraea NRRL 2338] Length = 216 Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats. Identities = 88/212 (41%), Positives = 122/212 (57%), Gaps = 2/212 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ + R +PVTV+ V RT +K+GY AVQ+ G + V+ Sbjct: 7 KGILGTKLGMTQVFDDQNRVVPVTVVQAGPNVVTQIRTPEKDGYSAVQLAFGAIDPRKVN 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V+P++ + E R D VG + F G +VDV G + GKGF+G Sbjct: 67 KPRTGHFTKAGVTPRRHVVELR-TADAGEYEVGQEVTAEVFEAGTVVDVVGTSKGKGFAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G A+HG HR GS G PGRVFK +M+GRMG +RVT +NL+V V Sbjct: 126 TMKRHGFRGQGASHGTQAVHRKPGSIGGCATPGRVFKGMRMSGRMGSDRVTTQNLKVHRV 185 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 + + GL+L+KG +PG K +LV+ K Sbjct: 186 EGESGLLLIKGAIPGP-KGGLVLVKSPAKGGA 216 >gi|256827416|ref|YP_003151375.1| 50S ribosomal protein L3P [Cryptobacterium curtum DSM 15641] gi|256583559|gb|ACU94693.1| LSU ribosomal protein L3P [Cryptobacterium curtum DSM 15641] Length = 206 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 85/209 (40%), Positives = 123/209 (58%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M + + KLGMT +++ + +PVTV+ + +T + +GY AVQ+G G K + Sbjct: 1 MINAIYGTKLGMTQIFSEDDEVVPVTVIQAAPNTICQLKTKETDGYEAVQLGFGAIKPQK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++PM G F+ V P + L E RV +D +G + S F + VDVT + GKGF Sbjct: 61 VNRPMGGHFAKQGVDPVRHLREVRV-EDASAHSLGEKVTVSLFADAKKVDVTATSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G M+R+NF G HG HR+ GS G P RVFK ++ G MG + VTVKNL+VV Sbjct: 120 AGVMRRYNFRGGPGGHGAH-FHRAPGSVGMCATPSRVFKGLRLPGHMGVDTVTVKNLDVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +D+++ LILVKG VPG KN+ + VR + Sbjct: 179 RIDEEQNLILVKGAVPGG-KNAMVRVRLA 206 >gi|282882468|ref|ZP_06291089.1| 50S ribosomal protein L3 [Peptoniphilus lacrimalis 315-B] gi|281297610|gb|EFA90085.1| 50S ribosomal protein L3 [Peptoniphilus lacrimalis 315-B] Length = 209 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 92/209 (44%), Positives = 128/209 (61%), Gaps = 3/209 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RK+GMT +++ +G PV+V+ ++ V +T + +GY A+Q+ AG K V+KP Sbjct: 4 LIGRKIGMTQIFDEKGIVTPVSVIEVEPNIVTQKKTPENDGYSAIQISAGAVKENKVNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +G F VS KK L EF + D D +G F VG+ VDV G + GKG +G + Sbjct: 64 TKGHFDKAGVSYKKYLSEF-LTDDVDSYNLGDEIKVDIFEVGEHVDVIGTSKGKGTAGII 122 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH FG R THG S HR G G PG+VFKN +MAG+MG RVTV+NLE+V +D Sbjct: 123 KRHGFGRGRETHG-SKFHRMPGGMGAASYPGKVFKNHRMAGKMGNERVTVQNLEIVRIDA 181 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + LILVKG +PG KK S + V+++ K A Sbjct: 182 SKNLILVKGAIPGNKK-SKVFVKETVKKA 209 >gi|315652354|ref|ZP_07905346.1| 50S ribosomal protein L3 [Eubacterium saburreum DSM 3986] gi|315485477|gb|EFU75867.1| 50S ribosomal protein L3 [Eubacterium saburreum DSM 3986] Length = 225 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 84/227 (37%), Positives = 119/227 (52%), Gaps = 18/227 (7%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ARK+GMT +++ G IPVTVL C V +T + +GY +VQV G+ + K Sbjct: 1 MKKAILARKVGMTQIFDENGVLIPVTVLLAGPCVVTQVKTEENDGYNSVQVAYGQIRTKL 60 Query: 61 VSKPMRGFFSSVNVS---------------PKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105 V+K G + + + + EF+ + + P + F Sbjct: 61 VNKAKAGHLAKAGIEKTVVEKGDKKREVFTAGRFIREFKFENASEYAP-KAEIKVDIFAA 119 Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165 G VD T ++ GKGF GA+KRH +HG S HR GS G DP VFK K M G Sbjct: 120 GDKVDATAVSKGKGFQGAIKRHGQSRGPMSHG-SKFHRHQGSNGSSSDPSHVFKGKGMPG 178 Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 MG RVT +NLE+V VD R LILVKG +PG+KK + I ++++ K Sbjct: 179 HMGAKRVTTQNLEIVRVDADRNLILVKGSMPGSKK-ALITLKETVKK 224 >gi|253701922|ref|YP_003023111.1| 50S ribosomal protein L3 [Geobacter sp. M21] gi|259646547|sp|C6E4Q7|RL3_GEOSM RecName: Full=50S ribosomal protein L3 gi|251776772|gb|ACT19353.1| ribosomal protein L3 [Geobacter sp. M21] Length = 211 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 89/212 (41%), Positives = 123/212 (58%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT ++ +GRRI VTV+ C VV +++ K+GY A+QVG G Sbjct: 1 MNKGLIGKKLGMTQIFAEDGRRIAVTVVEAGPCVVVQKKSVAKDGYSAIQVGLGAKDASR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + G E R+ D +G V + F G LVDVTG +IGKGF Sbjct: 61 ANAAQIGHCKGAGAGVFTHYRELRMDNTDA-YNLGDVIEAAVFEEGDLVDVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR F G R++HG S HR+ GS GC P RVFKNKKM G++G +VTV+ L+VV Sbjct: 120 AGVIKRWGFKGGRSSHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQLGNEKVTVQRLKVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD LIL+ G +PG+ N +L++DS K+ Sbjct: 179 RVDAADNLILLGGAIPGSA-NGVVLIKDSVKA 209 >gi|153214894|ref|ZP_01949692.1| ribosomal protein L3 [Vibrio cholerae 1587] gi|124115053|gb|EAY33873.1| ribosomal protein L3 [Vibrio cholerae 1587] Length = 184 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 86/184 (46%), Positives = 116/184 (63%), Gaps = 1/184 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV G K V+ Sbjct: 2 IGLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGSKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 180 Query: 183 DDKR 186 D +R Sbjct: 181 DAER 184 >gi|315056921|ref|XP_003177835.1| 54S ribosomal protein L9 [Arthroderma gypseum CBS 118893] gi|311339681|gb|EFQ98883.1| 54S ribosomal protein L9 [Arthroderma gypseum CBS 118893] Length = 304 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 103/215 (47%), Positives = 144/215 (66%), Gaps = 3/215 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GMT +Y+ G R P TVL LD QVV H+T +KNGY AVQVG+G + Sbjct: 77 LRTGALAIKKGMTAIYDPETGVRTPCTVLQLDGAQVVSHKTFEKNGYCAVQVGSGFKYER 136 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV+KPM G FS+ VSPK+ + EFRV+ + LLP+G V + +F GQ VDV + G G Sbjct: 137 NVTKPMLGHFSANGVSPKRHIHEFRVKDEAGLLPIGEVINADWFQEGQYVDVRSNSRGMG 196 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+GAMK+ F G +HGVS++HRS GST Q G RV+ KKM GRMG ++VT+++L+ Sbjct: 197 FAGAMKKWGFHGQDRSHGVSLTHRSLGSTAPSQGGGSRVYPGKKMPGRMGNHQVTLQSLK 256 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V+ VD ++G+++VKG V G K + ++D+ K Sbjct: 257 VLKVDAEKGIVVVKGGVAGPKGRC-VKIQDAIKKP 290 >gi|84515208|ref|ZP_01002571.1| 50S ribosomal protein L3 [Loktanella vestfoldensis SKA53] gi|84511367|gb|EAQ07821.1| 50S ribosomal protein L3 [Loktanella vestfoldensis SKA53] Length = 272 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 115/202 (56%), Positives = 154/202 (76%), Gaps = 2/202 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++ +GR++PVTVL L+N QVV RT++K+GY+AVQ+GAG AK K S+ MRG F++ Sbjct: 1 MTRLFMEDGRQVPVTVLALENLQVVAQRTVEKDGYVAVQLGAGAAKAKRTSQAMRGHFAA 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 V PK+K+ EFRV + +++ VG + +++ GQ VDV+G +IGKGF+GAMKRHNFGG Sbjct: 61 AKVEPKRKVAEFRVAPE-NMINVGETITANHYFEGQYVDVSGTSIGKGFAGAMKRHNFGG 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 LRA+HGVS+SHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV D RGLI+V Sbjct: 120 LRASHGVSVSHRSHGSTGQCQDPGKVFKGKKMAGHMGSARVTTQNLQVVRTDADRGLIMV 179 Query: 192 KGCVPGAKKNSWILVRDSFKSA 213 KG VPG+ + W+ ++D+ K Sbjct: 180 KGAVPGS-RGGWVTLKDAVKKP 200 >gi|257784963|ref|YP_003180180.1| 50S ribosomal protein L3 [Atopobium parvulum DSM 20469] gi|257473470|gb|ACV51589.1| ribosomal protein L3 [Atopobium parvulum DSM 20469] Length = 206 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 90/209 (43%), Positives = 123/209 (58%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M + ++ RKLGMT V++ +PVTV+ C V +T++ +GY AVQ+G G+ K+ Sbjct: 1 MVNTILGRKLGMTQVWDENDNVVPVTVVLAGPCTVSQVKTVETDGYNAVQIGFGDISEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM G F + V P + L E RV +D G V + + F+ VDVTG + GKGF Sbjct: 61 VNKPMAGHFKAQGVEPMRYLREVRV-EDASEHKTGDVVTVADFSEVTTVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NF THG S + R GS G P RV K M G MG RVTVKNL++V Sbjct: 120 QGTVKRWNFSRGPMTHG-SRNQRRPGSIGQCAYPARVRKGLHMYGHMGAERVTVKNLKLV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VD ++ L+L+KG VPG KN+ + VR + Sbjct: 179 RVDAEQNLMLIKGAVPGG-KNALVQVRMA 206 >gi|282898357|ref|ZP_06306348.1| Ribosomal protein L3 [Raphidiopsis brookii D9] gi|281196888|gb|EFA71793.1| Ribosomal protein L3 [Raphidiopsis brookii D9] Length = 212 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 90/211 (42%), Positives = 126/211 (59%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT +++ G IPVTV+ C V +T +GY A+QVG GE K K Sbjct: 1 MSVGILGTKLGMTQIFDEAGVSIPVTVIKAGPCTVTQVKTQPTDGYCAIQVGYGEVKPKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G + + P + L E+R D +G F+VGQ+VDV G +IG+GF Sbjct: 61 LNQPKLGHLAKSSAGPVRYLNEYRTDAAGD-YALGQEIKADIFSVGQIVDVIGTSIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KR+NFG +HG S +HR+ GS G PGRV+ K+MAGR+GG+RVTV+ L VV Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGSRVTVRKLTVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R LIL+KG +PG + V + K Sbjct: 179 KVDAERNLILIKGAIPGKP-GGLVNVVPTTK 208 >gi|325916487|ref|ZP_08178756.1| LSU ribosomal protein L3P [Xanthomonas vesicatoria ATCC 35937] gi|325537276|gb|EGD09003.1| LSU ribosomal protein L3P [Xanthomonas vesicatoria ATCC 35937] Length = 216 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 93/210 (44%), Positives = 128/210 (60%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G V RK GM+ V+ +GR +PVT++ ++ +T++ +GY AVQ+ G + V+K Sbjct: 8 GFVGRKAGMSRVFTEDGRSVPVTLIEATPNRIAQIKTVETDGYSAVQITVGARRAALVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P G F+ V + L+EFRV+ VG F VGQ VDV G+T GKGF G Sbjct: 68 PAAGHFAKAKVEAGRGLWEFRVEDAQLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQG 127 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR+NF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + + +NLEVV V Sbjct: 128 TIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVKV 187 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +RGLI ++G VPGA ++VR + K+ Sbjct: 188 DVERGLIAIRGAVPGAAGGD-VIVRPASKA 216 >gi|281423839|ref|ZP_06254752.1| 50S ribosomal protein L3 [Prevotella oris F0302] gi|299141147|ref|ZP_07034284.1| 50S ribosomal protein L3 [Prevotella oris C735] gi|281402066|gb|EFB32897.1| 50S ribosomal protein L3 [Prevotella oris F0302] gi|298577107|gb|EFI48976.1| 50S ribosomal protein L3 [Prevotella oris C735] Length = 204 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 83/205 (40%), Positives = 123/205 (60%), Gaps = 5/205 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T +K+GY A+Q+G EAK SK Sbjct: 3 GLIGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTEEKDGYKALQLGFEEAKENRTSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 PM G F +PKK L EF+ ++ + +G + F + VD+ G + GKGF G Sbjct: 63 PMMGTFKKAGTTPKKHLAEFKFDEEHN---LGDTITVELFADAKFVDIVGTSKGKGFQGV 119 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG ++THG R GS G P +VFK +MAG+MGG+RVT +NL+V+ V Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLQVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + L+LVKG V G S +L++ Sbjct: 180 IPEHNLLLVKGSVAGCN-GSTVLIK 203 >gi|239636233|ref|ZP_04677237.1| 50S ribosomal protein L3 [Staphylococcus warneri L37603] gi|239598249|gb|EEQ80742.1| 50S ribosomal protein L3 [Staphylococcus warneri L37603] gi|330685188|gb|EGG96852.1| 50S ribosomal protein L3 [Staphylococcus epidermidis VCU121] Length = 223 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 93/220 (42%), Positives = 122/220 (55%), Gaps = 11/220 (5%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG + K Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEAGQNVVLQKKTEEVDGYNAIQVGFEDKKAYK 60 Query: 61 V--------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 +KP G + +PK+ + EFR D+ VG S F G ++DVT Sbjct: 61 KGSKTNKYANKPAEGHAKKADTAPKRFIREFRNVNVDE-YEVGQEVSVDTFETGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH HG HR+ GS G D RVFK +KM GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMAHGSH-FHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 TV+NLEVV VD + +ILVKG VPG KK + + S KS Sbjct: 179 TVQNLEVVQVDTENSVILVKGNVPGPKKG-LVEISTSIKS 217 >gi|171462879|ref|YP_001796992.1| ribosomal protein L3 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|226730546|sp|B1XSQ1|RL3_POLNS RecName: Full=50S ribosomal protein L3 gi|171192417|gb|ACB43378.1| ribosomal protein L3 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 218 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 88/219 (40%), Positives = 125/219 (57%), Gaps = 3/219 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ EG IPVTV+ + + +V +T NGY A+Q+ G + Sbjct: 1 MSLGLIGRKVGMTRLFTDEGEAIPVTVIDVSDNRVAQIKTQATNGYDAIQLAHGTRRATR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSY-FTVGQLVDVTGMTIGK 118 V+K M G F+ V L EF + + G V FT GQ VDV G+TIGK Sbjct: 61 VTKAMAGHFAKAGVMAGNALNEFHLDAAKIAEMTPGQVIPAETAFTAGQKVDVQGVTIGK 120 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G++G +KR++F RA+HG S SH GS G QDPGRVF K+M G +G TV+NL Sbjct: 121 GYAGTIKRYHFASGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDITRTVQNLV 180 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 + +D +R LI+VKG +PGA ++V + K+ + K Sbjct: 181 IARIDAERNLIMVKGAIPGAPGGK-VIVTPAVKTPLKKK 218 >gi|298207727|ref|YP_003715906.1| 50S ribosomal protein L3 [Croceibacter atlanticus HTCC2559] gi|83850364|gb|EAP88232.1| 50S ribosomal protein L3 [Croceibacter atlanticus HTCC2559] Length = 205 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 86/206 (41%), Positives = 121/206 (58%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G + K S Sbjct: 2 SGLIGKKIGMTSIFDENGKNIPCTVIQAGPCVVTQVRTSEVDGYKALQLGFDDKADKRAS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 G F SPK K+ EF+ +DD +G + F G+ VDV+G + GKGF G Sbjct: 62 NAAVGHFKKAGTSPKYKVAEFKKFEDD--FNLGDSVTVEMFKEGEFVDVSGTSKGKGFQG 119 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG +ATHG R+ GS G P RVFK KMAG+MG +V V+NL V+ Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGQMGNEKVKVQNLRVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V + LI+VKG VPG KNS++ ++ Sbjct: 180 VVADKNLIVVKGAVPG-HKNSYVTIQ 204 >gi|15617118|ref|NP_240331.1| 50S ribosomal protein L3 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11134328|sp|P57591|RL3_BUCAI RecName: Full=50S ribosomal protein L3 gi|25294942|pir||A84991 50S ribosomal protein L3 [imported] - Buchnera sp. (strain APS) gi|10039183|dbj|BAB13217.1| 50S ribosomal protein L3 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 209 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 91/209 (43%), Positives = 133/209 (63%), Gaps = 2/209 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ EG IPVTV+ L ++ + ++ + Y A+QV G K ++ Sbjct: 2 IGLVGKKIGMTRIFTEEGTSIPVTVIELKENRITQVKNINTDLYCAIQVTTGIKKSNRLN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P + L+EFR K+++ +G + + F + VD+TG++ GKGFSG Sbjct: 62 KPQSGHFLKSGVTPGRGLWEFRTDKNNNF-KIGQSITINIFNNVKKVDITGISKGKGFSG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG++G RVTV++L +V + Sbjct: 121 TVKRWNFHTQDATHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGQLGNTRVTVQSLNIVRI 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D+ R L+LVKG VPGA S ++V+ + K Sbjct: 181 DEHRNLLLVKGAVPGA-TGSDLIVKPAIK 208 >gi|224477220|ref|YP_002634826.1| 50S ribosomal protein L3 [Staphylococcus carnosus subsp. carnosus TM300] gi|254803691|sp|B9DM19|RL3_STACT RecName: Full=50S ribosomal protein L3 gi|222421827|emb|CAL28641.1| 50S ribosomal protein L3 [Staphylococcus carnosus subsp. carnosus TM300] Length = 220 Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats. Identities = 87/221 (39%), Positives = 119/221 (53%), Gaps = 11/221 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG + + Sbjct: 1 MTKGILGRKIGMTQVFGENGDLIPVTVVEAGQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60 Query: 61 V--------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 +KP G +PK+ + EF+ + D VG S F G ++DVT Sbjct: 61 KDSKSNKYANKPAEGHAKKAGTAPKRFIREFK-NINVDEYEVGQEVSVDTFEAGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF G +KRH HG HR+ GS G D +VFK KM GRMGGN V Sbjct: 120 GVSKGKGFQGNIKRHGHARGPMAHGSH-FHRAPGSVGMASDASKVFKGHKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 TV+NLEVV +D + +ILVKG VPG KK + ++ S K Sbjct: 179 TVQNLEVVQIDAENNVILVKGNVPGPKKG-LVEIKTSIKKG 218 >gi|251799642|ref|YP_003014373.1| 50S ribosomal protein L3 [Paenibacillus sp. JDR-2] gi|247547268|gb|ACT04287.1| ribosomal protein L3 [Paenibacillus sp. JDR-2] Length = 207 Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats. Identities = 80/210 (38%), Positives = 113/210 (53%), Gaps = 4/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +KLGMT V+ EG +PVTV+ C V+ + + +GY AVQ G + K Sbjct: 2 KGILGKKLGMTQVFTAEGNVVPVTVIEAGPCVVLQKKDQENDGYEAVQFGFSDKKEARAI 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G N +PK+ + E R + VG F G+ VDVTG++ GKGF+G Sbjct: 62 KPEIGHAKKANTAPKRYVREIRGINLGE-YEVGQEVKADLFAEGEFVDVTGISKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR HG S HR GS G Q RV K K + G MG VT++ LE++ V Sbjct: 121 VIKRWGQSTGPMAHG-SRYHRGPGSMGSIQ-ANRVPKGKHLPGHMGHETVTIQKLEIIRV 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R +ILVKG +PG KN ++ V+ + K+ Sbjct: 179 DAERNVILVKGSIPGP-KNGFVKVKQTVKN 207 >gi|157964806|ref|YP_001499630.1| 50S ribosomal protein L3 [Rickettsia massiliae MTU5] gi|166990939|sp|A8F2E7|RL3_RICM5 RecName: Full=50S ribosomal protein L3 gi|157844582|gb|ABV85083.1| 50S ribosomal protein L3 [Rickettsia massiliae MTU5] Length = 215 Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats. Identities = 111/212 (52%), Positives = 163/212 (76%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G + K+ Sbjct: 1 MRTGIIAQKVGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+ F++ +SPK KL EFR+ ++ + + + +FT GQ VD+T TIGKGF Sbjct: 61 VTKPMKQVFANAKISPKTKLKEFRISEEH-FIDIATSLEVDHFTAGQFVDITATTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VF+ KKMAG MG N+VT++NL++ Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFRGKKMAGHMGCNQVTIQNLKIF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +VD +R LI+++G +PG KNS++ V+D+ K Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIKK 210 >gi|327301767|ref|XP_003235576.1| 50S ribosomal protein L3 [Trichophyton rubrum CBS 118892] gi|326462928|gb|EGD88381.1| 50S ribosomal protein L3 [Trichophyton rubrum CBS 118892] Length = 302 Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats. Identities = 101/215 (46%), Positives = 144/215 (66%), Gaps = 3/215 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GMT +Y+ G R P TVL LD QV+ H+T +KNGY AVQVG+G + Sbjct: 75 LRTGALAIKKGMTAIYDPETGVRTPCTVLQLDGAQVISHKTFEKNGYCAVQVGSGLKNER 134 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV++PM G FS+ VSPK+ + EFRV+ + LLP+G V + +F GQ VDV + G G Sbjct: 135 NVTRPMLGHFSANGVSPKRHIHEFRVKDETGLLPIGEVINADWFQEGQYVDVRSNSRGMG 194 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+GAMK+ F G +HGVS++HRS GST Q G RV+ KKM GRMG ++VT+++L+ Sbjct: 195 FAGAMKKWGFHGQDRSHGVSLTHRSLGSTAPSQGGGSRVYPGKKMPGRMGNHQVTLQSLK 254 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V+ VD ++G+++VKG V G K + ++D+ K Sbjct: 255 VLKVDAEKGIVVVKGGVAGPKGRC-VKIQDAIKKP 288 >gi|330997365|ref|ZP_08321216.1| 50S ribosomal protein L3 [Paraprevotella xylaniphila YIT 11841] gi|329570739|gb|EGG52455.1| 50S ribosomal protein L3 [Paraprevotella xylaniphila YIT 11841] Length = 205 Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats. Identities = 81/204 (39%), Positives = 120/204 (58%), Gaps = 4/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V ++++K+GY AVQ+G EAK KN + Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQLGFQEAKEKNTTA 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F +PK+ L EF + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGTTPKRHLAEFTGFEQE--LNLGDTVTVDMFEGTVYVDVIGTSKGKGFQGV 120 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG + THG R GS G P +VFK +M G+MG RVT +NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGLRMGGQMGNERVTAQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 + L+L+KG VPG K S +++ Sbjct: 181 IPEHNLLLIKGSVPG-YKGSIVII 203 >gi|312889367|ref|ZP_07748921.1| LSU ribosomal protein L3P [Mucilaginibacter paludis DSM 18603] gi|311298244|gb|EFQ75359.1| LSU ribosomal protein L3P [Mucilaginibacter paludis DSM 18603] Length = 205 Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats. Identities = 90/205 (43%), Positives = 129/205 (62%), Gaps = 4/205 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C V +++D +GY AVQ+ GE K KN S Sbjct: 2 SGIIGKKVGMTSIFDEAGKNIPCTVIEAGPCVVTHVKSVDTDGYAAVQLAYGEKKEKNTS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G F +PK+KL EF+ +D+ +G V + F+ G VDV G + GKGF G Sbjct: 62 GPLKGHFQKAGTTPKRKLVEFKTFEDE--KSLGDVITVDLFSAGDFVDVVGTSKGKGFQG 119 Query: 123 AMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG+ THG R+ GS G P RVFK +MAG MG +RV V+NL+VV Sbjct: 120 VVKRHGFGGVGMQTHGQHNRLRAPGSLGASSWPSRVFKGMRMAGHMGNSRVKVQNLQVVK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 V ++ LI+VKG +PGA K S+++V Sbjct: 180 VYPEQNLIVVKGSIPGA-KGSFVIV 203 >gi|115378276|ref|ZP_01465444.1| ribosomal protein L3 [Stigmatella aurantiaca DW4/3-1] gi|115364718|gb|EAU63785.1| ribosomal protein L3 [Stigmatella aurantiaca DW4/3-1] Length = 259 Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats. Identities = 98/221 (44%), Positives = 136/221 (61%), Gaps = 3/221 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GMT V+N EG +PVTV+ + CQVV RT +K+ Y AV +G GE + K ++ Sbjct: 38 KGLIGKKIGMTQVFNDEGNLVPVTVVDVSTCQVVGKRTPEKDQYSAVTLGFGEIREKVLN 97 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 + RGFF + + ++ L EFRV +D VG FT GQLVDVTG T G+GFS Sbjct: 98 QAQRGFFKKNSAALRRHLKEFRVTPEDAAQFNVGDAVKADLFTKGQLVDVTGTTKGRGFS 157 Query: 122 GAMKRHNFGGLR-ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G M+R +F G + THG R G+ G R+ PGR + NKKM G G +VT +NL VV Sbjct: 158 GVMRRWSFKGSQTKTHGTHEYQRHPGAIGQRKTPGRTYPNKKMPGHYGVEQVTTQNLTVV 217 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 VD ++GL+L+KG VPG ++ + VR S K A+ + K S Sbjct: 218 DVDTEKGLLLIKGAVPG-HNDAIVYVRPSVKVALRAQHKAS 257 >gi|300814637|ref|ZP_07094888.1| 50S ribosomal protein L3 [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511256|gb|EFK38505.1| 50S ribosomal protein L3 [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 209 Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats. Identities = 92/209 (44%), Positives = 128/209 (61%), Gaps = 3/209 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RK+GMT +++ +G PV+V+ ++ V +T + +GY A+Q+ AG K V+KP Sbjct: 4 LIGRKIGMTQIFDEKGIVTPVSVIEVEPNIVTQKKTSENDGYSAIQISAGAVKENKVNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +G F VS KK L EF + D D +G F VG+ VDV G + GKG +G + Sbjct: 64 TKGHFDKAGVSYKKYLSEF-LTDDVDSYNLGDEIKVDIFEVGEHVDVIGTSKGKGTAGII 122 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH FG R THG S HR G G PG+VFKN +MAG+MG RVTV+NLE+V +D Sbjct: 123 KRHGFGRGRETHG-SKFHRMPGGMGAASYPGKVFKNHRMAGKMGNERVTVQNLEIVRIDA 181 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + LILVKG +PG KK S + V+++ K A Sbjct: 182 SKNLILVKGAIPGNKK-SKVFVKETVKKA 209 >gi|145588242|ref|YP_001154839.1| ribosomal protein L3 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189042856|sp|A4SUW1|RL3_POLSQ RecName: Full=50S ribosomal protein L3 gi|145046648|gb|ABP33275.1| LSU ribosomal protein L3P [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 218 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 85/219 (38%), Positives = 126/219 (57%), Gaps = 3/219 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ EG IPVTV+ + + ++ +T +GY A+Q+ G + Sbjct: 1 MSLGLIGRKVGMTRLFTDEGDSIPVTVIDVSDNRIAQIKTQATDGYDAIQLAHGTRRATR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSY-FTVGQLVDVTGMTIGK 118 V+K M G F+ V L EF++ + G V FT GQ VDV G++IGK Sbjct: 61 VTKAMAGHFAKAGVMAGNGLNEFQLDAAKIAEMTPGQVIPADTAFTAGQKVDVQGVSIGK 120 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G++G +KR++F RA+HG S SH GS G QDPGRVF K+M G +G TV+NL Sbjct: 121 GYAGTIKRYHFASGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTRTVQNLV 180 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 + +D +R LI+VKG +PGA ++V + K+ + K Sbjct: 181 IARIDAERNLIMVKGAIPGAPGGK-VIVTPAVKTPLKKK 218 >gi|330718972|ref|ZP_08313572.1| 50S ribosomal protein L3 [Leuconostoc fallax KCTC 3537] Length = 226 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 80/220 (36%), Positives = 115/220 (52%), Gaps = 8/220 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G I VT + V+ + + +GY AVQ+G + + Sbjct: 1 MTKGILGRKVGMTQVFTETGELIAVTAVEATPNVVLQLKNAETDGYSAVQLGYQDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G N +PK+ + E ++ + VG F G VDVTG+T G GF Sbjct: 61 SNKPEQGHAKKANTTPKRYIRE--IRDAEGEFNVGDEIKVDTFQAGDYVDVTGITKGHGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR HG S HR GS G RVFK K + GRMG N+ T++N+ +V Sbjct: 119 QGAIKRLGQSRGPMAHG-SRYHRRPGSMGAI--INRVFKGKLLPGRMGNNKRTMQNVAIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220 VD + L+L+KG VPGA K S + ++ + K VN K Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTIKSTVK--VNAKHPA 212 >gi|242371896|ref|ZP_04817470.1| 50S ribosomal protein L3 [Staphylococcus epidermidis M23864:W1] gi|242350403|gb|EES42004.1| 50S ribosomal protein L3 [Staphylococcus epidermidis M23864:W1] Length = 220 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 93/221 (42%), Positives = 121/221 (54%), Gaps = 11/221 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60 Query: 54 -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 G K +KP G + +PK+ + EFR D+ VG S F G ++DVT Sbjct: 61 KGSKSNKYANKPAEGHAKKADTAPKRFIREFRNVNVDE-YEVGQEVSVDTFETGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH HG HR+ GS G D RVFK +KM GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMAHGSH-FHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 TV+NLEVV VD + +ILVKG VPG KK + + S K Sbjct: 179 TVQNLEVVQVDTENSVILVKGNVPGPKKG-LVEITTSIKKG 218 >gi|239948319|ref|ZP_04700072.1| 50S ribosomal protein L3 [Rickettsia endosymbiont of Ixodes scapularis] gi|239922595|gb|EER22619.1| 50S ribosomal protein L3 [Rickettsia endosymbiont of Ixodes scapularis] Length = 215 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 113/212 (53%), Positives = 165/212 (77%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G + K+ Sbjct: 1 MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V KPM+ F++ +SPK KL EFR+ ++ + + + + +FT GQ VD+T +TIGKGF Sbjct: 61 VIKPMKQVFANAKISPKTKLKEFRISEE-NFIDIAASLEVDHFTAGQFVDITAITIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +VD +R LI+++G +PG KNS++LV+D+ K Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLLVKDAIKK 210 >gi|218885187|ref|YP_002434508.1| 50S ribosomal protein L3 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226725164|sp|B8DN96|RL3_DESVM RecName: Full=50S ribosomal protein L3 gi|218756141|gb|ACL07040.1| ribosomal protein L3 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 209 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 92/206 (44%), Positives = 123/206 (59%), Gaps = 2/206 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 + G++ RK+GMT ++ +G + VTV+ C V+ R + +GY AVQ+ EAK K+V Sbjct: 4 KLGILGRKVGMTRIFASDGSAVAVTVIQAGPCPVIQVRNGETDGYDAVQIAFEEAKEKHV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP RG F+ + L E R++ + VG + S F G+ V VTG +IGKG+ Sbjct: 64 TKPARGHFAKAGKGLFRNLREIRLEAPAEF-EVGQELTVSLFAAGEKVKVTGTSIGKGYQ 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G M+R NF G + THG HRS GS G PG VFK KKMAG G RVTVKNLE+V Sbjct: 123 GVMRRWNFAGSKDTHGCEKVHRSGGSIGNNTFPGHVFKGKKMAGHWGDERVTVKNLEIVD 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 + + +ILVKG VPG KN +LVR Sbjct: 183 IRAEDNVILVKGAVPGP-KNGLVLVR 207 >gi|71065059|ref|YP_263786.1| 50S ribosomal protein L3 [Psychrobacter arcticus 273-4] gi|109893542|sp|Q4FUF6|RL3_PSYA2 RecName: Full=50S ribosomal protein L3 gi|71038044|gb|AAZ18352.1| LSU ribosomal protein L3P [Psychrobacter arcticus 273-4] Length = 212 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 95/213 (44%), Positives = 133/213 (62%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V +K GMT V+ G IPVTV+ + ++ + D +GY A+QV G + Sbjct: 1 MAIGLVGKKCGMTRVFTEAGASIPVTVVEISANRITQVKNTDVDGYQAIQVTTGTRRDSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFR-VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + ++EFR D + +G F GQ+VDVTG + GKG Sbjct: 61 VTAAQKGHFAKAGVAAGRGVWEFRANDSDLEGREIGGEILADLFEQGQMVDVTGSSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KRHNF ATHG S+SHR+HGSTG Q PG+VFK KKMAG+MG RVTV+ LEV Sbjct: 121 FQGPVKRHNFSMQDATHGNSVSHRAHGSTGQNQSPGKVFKGKKMAGQMGNKRVTVQGLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +SVD ++GL+++KG +PGA ++VR S K+ Sbjct: 181 ISVDAEKGLLVIKGAIPGATGGD-VIVRPSVKA 212 >gi|291001533|ref|XP_002683333.1| 50S ribosomal protein L3 [Naegleria gruberi] gi|284096962|gb|EFC50589.1| 50S ribosomal protein L3 [Naegleria gruberi] Length = 449 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 93/216 (43%), Positives = 132/216 (61%), Gaps = 4/216 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+GV+A+KLGM ++ R+P+TVLH+ CQVV +T +K+GY A+Q+GAG K Sbjct: 142 VRTGVIAQKLGMIPFWDSYHARVPLTVLHIPKCQVVQVKTKEKDGYTALQLGAGSMSAKK 201 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+ G V PK E +V +D +LPVG + +F GQ +D++G + GK F Sbjct: 202 LTKPLLGHCQKAGVEPKHVYTEAKVTED-AILPVGFEITARHFIPGQFIDISGRSKGKRF 260 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR F G ATHGVS+ HRS GSTG +VFK KKMAGRMG ++T N V Sbjct: 261 AGPMKRWGFAGQPATHGVSVVHRSLGSTGTM--INKVFKGKKMAGRMGHEQITQLNYYVY 318 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 VD + I VKG VPG +++ + D+ + + C Sbjct: 319 MVDVENNCIYVKGSVPGPN-GAYLYLNDASRKDLPC 353 >gi|241895187|ref|ZP_04782483.1| 50S ribosomal protein L3 [Weissella paramesenteroides ATCC 33313] gi|241871493|gb|EER75244.1| 50S ribosomal protein L3 [Weissella paramesenteroides ATCC 33313] Length = 208 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 6/211 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 G++ RK+GMT V+ G IPVTV+ V+ +TL+ +GY A+Q+G + + Sbjct: 3 TKGILGRKVGMTQVFTETGELIPVTVIEATPNVVLQVKTLENDGYSALQLGYQDKRQVLS 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP +G + N +PK+ + E ++ + VG F G+ VDVTG+T G G+ Sbjct: 63 NKPEQGHVAKANTTPKRYIRE--IRDAEGEFNVGDEVKVDIFAAGEAVDVTGITKGHGYQ 120 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +K+ HG S HR GS G RVFK KK+ GRMG ++ TV+NL+VV Sbjct: 121 GNIKKDGQARGPMAHG-SRYHRRPGSLGAI--INRVFKGKKLPGRMGNHKRTVQNLQVVR 177 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + +ILVKG VPGA K S + V+ S K+ Sbjct: 178 VDVENNVILVKGNVPGANK-SLVTVKYSKKA 207 >gi|15604505|ref|NP_221023.1| 50S ribosomal protein L3 [Rickettsia prowazekii str. Madrid E] gi|6226691|sp|P48952|RL3_RICPR RecName: Full=50S ribosomal protein L3 gi|3861199|emb|CAA15099.1| 50S RIBOSOMAL PROTEIN L3 (rplC) [Rickettsia prowazekii] gi|292572287|gb|ADE30202.1| 50S ribosomal protein L3 [Rickettsia prowazekii Rp22] Length = 216 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 115/214 (53%), Positives = 165/214 (77%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL K+GY A+ +G + K+ Sbjct: 1 MRTGIIAQKVGMTSVFNDKGERISLTLVKVDDCQVVGHKTLAKHGYNALVIGVKDQKISK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+ F++ ++PK KL EFR+ +D + + + S+ +F VGQ VD+T TIGKGF Sbjct: 61 VTKPMKQVFANAKIAPKTKLKEFRISED-NFIDIASILEVDHFRVGQFVDITATTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++ Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNKVTIQNLKIF 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 +VD R LI+++G +PG KNS++LV+D+ K A Sbjct: 180 AVDTNRKLIMIQGSIPG-HKNSYLLVKDAIKKAA 212 >gi|319789238|ref|YP_004150871.1| 50S ribosomal protein L3 [Thermovibrio ammonificans HB-1] gi|317113740|gb|ADU96230.1| 50S ribosomal protein L3 [Thermovibrio ammonificans HB-1] Length = 207 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 85/207 (41%), Positives = 119/207 (57%), Gaps = 5/207 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--VKN 60 G++ RK+GMT V+ +G+ I VTV+ C VV +T +++GY A+Q+G E Sbjct: 2 KGILGRKVGMTQVFTEDGKAIAVTVIEAGPCTVVQKKTPERDGYSALQLGFIEKNKAESK 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 KP+ G F + P + L E + + VG + F G+ VDVTG + G+GF Sbjct: 62 FPKPLLGHFKKAGIKPTRWLKEVKFDN-VEEYAVGDKITVDIFKPGEKVDVTGTSKGRGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH FGG R +HG S H GS G DPGRV K K+MAG G VTVKNLE+V Sbjct: 121 AGYHKRHGFGGGRRSHG-SDFHEGPGSIGACADPGRVHKGKRMAGHYGNETVTVKNLEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L+L+KG +PG K S ++V+ Sbjct: 180 DVIPEKNLLLIKGAIPG-HKGSLVIVK 205 >gi|78185522|ref|YP_377956.1| 50S ribosomal protein L3 [Synechococcus sp. CC9902] gi|109893566|sp|Q3AUW3|RL3_SYNS9 RecName: Full=50S ribosomal protein L3 gi|78169816|gb|ABB26913.1| LSU ribosomal protein L3P [Synechococcus sp. CC9902] Length = 218 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 81/219 (36%), Positives = 128/219 (58%), Gaps = 4/219 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +GR +PVT++ C++ + D +GY AVQ+G GE + K Sbjct: 1 MSIGILGKKLGMSQLFDEQGRAVPVTLIEAGPCRITQLKNDDTDGYAAVQIGFGETREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + + L E+RV D L +G + S F GQ VDV+G T+G+GF Sbjct: 61 INKPSKGHLTKSGEDLLRHLREYRVDNVDG-LELGGSITVSDFEAGQKVDVSGDTMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F THG S +HR GS G PGR++ K+M+GR GG + T + L ++ Sbjct: 120 AGLQKRHGFSRGPMTHG-SKNHRQPGSIGAGTTPGRIYPGKRMSGRYGGKKTTTRGLTIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK-SAVNCKG 218 +D R L++VKG VPG + + ++ + + A KG Sbjct: 179 RIDSDRNLLVVKGSVPGKP-GALLNIKPAVRVGAKPAKG 216 >gi|167764372|ref|ZP_02436497.1| hypothetical protein BACSTE_02756 [Bacteroides stercoris ATCC 43183] gi|167697777|gb|EDS14356.1| hypothetical protein BACSTE_02756 [Bacteroides stercoris ATCC 43183] Length = 205 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 84/204 (41%), Positives = 125/204 (61%), Gaps = 4/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EG+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYQAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PKK L EF+ + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFEGADYVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 + L+L+KG VPG K S +++ Sbjct: 181 IAEHNLLLIKGSVPGC-KGSIVII 203 >gi|317125872|ref|YP_004099984.1| 50S ribosomal protein L3P [Intrasporangium calvum DSM 43043] gi|315589960|gb|ADU49257.1| LSU ribosomal protein L3P [Intrasporangium calvum DSM 43043] Length = 221 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 86/202 (42%), Positives = 119/202 (58%), Gaps = 2/202 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V++ + R +PVTV+ C V R +GY AVQ+ G + V++PM G F Sbjct: 22 MTQVWDADNRLVPVTVVEAGPCVVTQVRNGATDGYDAVQIAFGAIDPRKVNQPMSGHFEK 81 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 V+P++ L E R D +G S F GQ VD TG T GKGF+G MKRH F G Sbjct: 82 AGVTPRRHLVELR-TADAADYELGQEISADVFEAGQRVDATGTTKGKGFAGVMKRHGFAG 140 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 + ++HG +HR GS G PGRVF+ +MAGRMGG R T +NL++ +VD ++GL+L+ Sbjct: 141 VSSSHGSHRNHRKPGSIGGCATPGRVFRGMRMAGRMGGVRQTTQNLQIHAVDAEKGLLLI 200 Query: 192 KGCVPGAKKNSWILVRDSFKSA 213 KG VPG + +L+R + K A Sbjct: 201 KGAVPGP-RGGIVLIRTAAKGA 221 >gi|149279664|ref|ZP_01885793.1| 50S ribosomal protein L3 [Pedobacter sp. BAL39] gi|149229700|gb|EDM35090.1| 50S ribosomal protein L3 [Pedobacter sp. BAL39] Length = 205 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 88/205 (42%), Positives = 132/205 (64%), Gaps = 4/205 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ +G+ IP TV+ C V +T +K+GY++VQ+G EAK KN + Sbjct: 2 SGIIGKKVGMTSIFDADGKNIPCTVIEAGPCVVTQVKTEEKDGYVSVQLGFDEAKEKNTT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 +P++G F+ N +PK+KL EF ++ L +G+ + F G VDV G + GKGF G Sbjct: 62 QPLKGHFAKANTTPKRKLVEF--DPFEEPLELGATVTVDIFNEGDFVDVVGTSKGKGFQG 119 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG THG R+ GS G P RVFK +MAGRMGG+RV ++NL+V+ Sbjct: 120 VVKRHGFGGVGGQTHGQHNRMRAPGSLGAASYPARVFKGMRMAGRMGGDRVKIQNLQVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 V + L++V G VPGA K S++++ Sbjct: 180 VYADKNLVVVSGSVPGA-KGSYVIL 203 >gi|159028206|emb|CAO89813.1| rplC [Microcystis aeruginosa PCC 7806] Length = 212 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT +++ G IPVTV+ C V +T +GY ++QVG K K Sbjct: 1 MSIGILGTKLGMTQIFDNKTGVAIPVTVVQAGPCPVTQVKTKKTDGYESIQVGYKTVKEK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP+ G + VSP + L E+R+ +D +G + + F G LVDV G TIG+G Sbjct: 61 ALNKPLLGHLAKAGVSPLRHLIEYRL-EDASAYTLGQEITAAIFQEGDLVDVAGTTIGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG KRHNF THG S +HR GSTG PGRVF K+MAG+ G +VT++ L V Sbjct: 120 FSGYQKRHNFKRGNMTHG-SKNHRLPGSTGAGTTPGRVFPGKRMAGQYGSTQVTIRKLSV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V +D +R LIL+KG VPG + + + + K Sbjct: 179 VKIDSERNLILIKGAVPGKP-GTLLNITPAKK 209 >gi|89902555|ref|YP_525026.1| 50S ribosomal protein L3 [Rhodoferax ferrireducens T118] gi|109893546|sp|Q21RV8|RL3_RHOFD RecName: Full=50S ribosomal protein L3 gi|89347292|gb|ABD71495.1| LSU ribosomal protein L3P [Rhodoferax ferrireducens T118] Length = 228 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 88/214 (41%), Positives = 127/214 (59%), Gaps = 3/214 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ EG IPVTV+ + N +V +T + +GY+A+QV G K V+K Sbjct: 8 GLLGRKVGMMRLFTDEGDSIPVTVVDVSNNRVTQVKTQENDGYVALQVTFGARKASRVTK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121 P G + V + + EFR+ D G+ + F VGQ VDV G TIGKGF+ Sbjct: 68 PAAGHLAKAGVEAGEIIREFRLTADVAAQYKAGATVPVTAVFAVGQKVDVQGTTIGKGFA 127 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRH+ RA+HG S SH GS G QDPGRVF K+M G +G + VT +NL+V+ Sbjct: 128 GTIKRHHMKSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDDTVTTQNLDVIR 187 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +D+ R L+++KG VPG+ ++ VR + K N Sbjct: 188 IDEARQLLMIKGAVPGSA-GGFVTVRPAVKVKAN 220 >gi|302869972|ref|YP_003838609.1| 50S ribosomal protein L3 [Micromonospora aurantiaca ATCC 27029] gi|315501433|ref|YP_004080320.1| 50S ribosomal protein l3 [Micromonospora sp. L5] gi|302572831|gb|ADL49033.1| 50S ribosomal protein L3 [Micromonospora aurantiaca ATCC 27029] gi|315408052|gb|ADU06169.1| 50S ribosomal protein L3 [Micromonospora sp. L5] Length = 221 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 96/218 (44%), Positives = 132/218 (60%), Gaps = 3/218 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ + +PVTV+ C V R+ DK+GY AVQ+ G + V Sbjct: 6 KGILGAKLGMTQVWD-NNKVVPVTVVQAGPCVVSQVRSADKDGYSAVQLAYGVIDPRKVK 64 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G ++ +V+P++ + E R D P G + F G ++DVTG T GKG++G Sbjct: 65 KPIAGHYAKADVAPRRHIVELRTSDAADYAP-GQEVTVEEFPAGVVIDVTGKTKGKGYAG 123 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F GLRA+HGV HRS GS G PGRVFK +MAGRMGG R TV+NL V +V Sbjct: 124 PMKRHGFHGLRASHGVERKHRSPGSIGACATPGRVFKGTRMAGRMGGVRYTVQNLTVQAV 183 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220 D + L+LV+G +PG K + +LVR + K+ V G Sbjct: 184 DTENNLLLVRGAIPGP-KGALVLVRTAAKAKVKKGGAA 220 >gi|199598832|ref|ZP_03212243.1| Ribosomal protein L3 [Lactobacillus rhamnosus HN001] gi|199590244|gb|EDY98339.1| Ribosomal protein L3 [Lactobacillus rhamnosus HN001] Length = 210 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 119/212 (56%), Gaps = 5/212 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY AVQ+G G+ + Sbjct: 3 RKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQVKTVESDGYEAVQLGYGDLREVLT 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G + +PK+ + E R VGS F G +VDVTG + G G+ Sbjct: 63 NKPSVGHAKKADTTPKRFVREIR-DVALSDYEVGSEVKADEFAAGDIVDVTGTSKGHGYQ 121 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +K+ HG S HR GS G +VFK KK+ GRMG + T++NL+VV+ Sbjct: 122 GNIKKDGQSRGPMAHG-SRYHRRPGSLGAI--INKVFKGKKLPGRMGNHTRTMQNLQVVA 178 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + ++L+KG VPGA K S++ +R + K+A Sbjct: 179 ADTEHNVLLIKGNVPGANK-SFVTIRSAVKAA 209 >gi|319952196|ref|YP_004163463.1| lsu ribosomal protein l3p [Cellulophaga algicola DSM 14237] gi|319420856|gb|ADV47965.1| LSU ribosomal protein L3P [Cellulophaga algicola DSM 14237] Length = 205 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 86/205 (41%), Positives = 124/205 (60%), Gaps = 4/205 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ L C V RT + +GY A+Q+G + K + Sbjct: 2 SGLIGKKVGMTSIFDENGKNIPCTVIELGPCVVTQVRTEEVDGYSALQLGFDDKAEKRAN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F VSPKKK+ EFR + +G F G+ VD G++ GKGF G Sbjct: 62 KAETGHFKKAGVSPKKKVVEFR--DFEGGYKLGDTIGVDLFVEGEFVDAIGISKGKGFQG 119 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH F G +ATHG R+ GS G P RVFK KMAGRMG ++VTV+NL+V+ Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSVGAASYPARVFKGMKMAGRMGTDKVTVQNLKVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 V ++ L+++KGCVPG KN+++ + Sbjct: 180 VVPEKNLLVLKGCVPG-HKNAYVTI 203 >gi|254569692|ref|XP_002491956.1| Mitochondrial ribosomal protein of the large subunit [Pichia pastoris GS115] gi|238031753|emb|CAY69676.1| Mitochondrial ribosomal protein of the large subunit [Pichia pastoris GS115] gi|328351549|emb|CCA37948.1| 50S ribosomal protein L3 [Pichia pastoris CBS 7435] Length = 262 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 107/211 (50%), Positives = 145/211 (68%), Gaps = 2/211 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ K GM Y EG RIP TVL +D +V ++T+ +GY AVQVG G K+KN Sbjct: 52 RPGLIGVKRGMVPFYTNEGLRIPCTVLEIDQVEVTHNKTVANDGYSAVQVGYGF-KLKNQ 110 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +K M G F+ VSPK+K+ EF V+ DD LLPVG++ +F VG+ VD+ ++ GKGF+ Sbjct: 111 TKKMLGHFAKAQVSPKEKVVEFHVKSDDGLLPVGTLLKADHFKVGEFVDLQSISKGKGFA 170 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR NF GL+A+HGVS +HRS GSTG Q PGR KKMAGRMGG+ VT++N+EVV Sbjct: 171 GVMKRWNFHGLKASHGVSKAHRSAGSTGGNQTPGRTLPGKKMAGRMGGHNVTLQNVEVVD 230 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V+ ++G IL+KG V GA S++ ++D+ K Sbjct: 231 VNAEKGYILIKGPVSGA-TGSYVKIQDAIKR 260 >gi|255690003|ref|ZP_05413678.1| 50S ribosomal protein L3 [Bacteroides finegoldii DSM 17565] gi|260624611|gb|EEX47482.1| 50S ribosomal protein L3 [Bacteroides finegoldii DSM 17565] Length = 205 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 83/204 (40%), Positives = 124/204 (60%), Gaps = 4/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYEAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PK+ L EF+ + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKRHLAEFK--EFETELNLGDTVTVEMFNDANFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 L+LVKG +PG K S +L+ Sbjct: 181 IADHNLLLVKGSIPGC-KGSIVLI 203 >gi|329962267|ref|ZP_08300273.1| 50S ribosomal protein L3 [Bacteroides fluxus YIT 12057] gi|328530375|gb|EGF57252.1| 50S ribosomal protein L3 [Bacteroides fluxus YIT 12057] Length = 205 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 84/204 (41%), Positives = 125/204 (61%), Gaps = 4/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EG+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYEAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PKK L EF+ + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFNDAAFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 + L+L+KG VPG K S +++ Sbjct: 181 IAEHNLLLIKGSVPGC-KGSIVII 203 >gi|260905721|ref|ZP_05914043.1| 50S ribosomal protein L3 [Brevibacterium linens BL2] Length = 224 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 85/209 (40%), Positives = 117/209 (55%), Gaps = 2/209 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ + +PVTV+ + V R + +GY AVQ+ GE + V+ Sbjct: 16 KGLLGTKLGMTQVWDEQNNLVPVTVVAAGSNVVTQVRNEETDGYPAVQIAFGEIDPRKVN 75 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V+P++ L E R D +G F G VDVT T GKG +G Sbjct: 76 KPTAGHFEKAGVTPRRHLVELR-TADAADYSLGQELGVDTFDAGIKVDVTAKTKGKGTAG 134 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G PGRVFK +MAGRMG + T +NL + +V Sbjct: 135 VMKRHGFHGVGASHGQHRNHRKPGSIGGAATPGRVFKGMRMAGRMGAVKHTTQNLTIHAV 194 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D + +L+KG VPG K + +LVR + K Sbjct: 195 DTENNFLLIKGAVPGP-KGAVVLVRSAAK 222 >gi|229552708|ref|ZP_04441433.1| ribosomal protein L3 [Lactobacillus rhamnosus LMS2-1] gi|258509482|ref|YP_003172233.1| 50S ribosomal protein L3 [Lactobacillus rhamnosus GG] gi|258540679|ref|YP_003175178.1| 50S ribosomal protein L3 [Lactobacillus rhamnosus Lc 705] gi|229313914|gb|EEN79887.1| ribosomal protein L3 [Lactobacillus rhamnosus LMS2-1] gi|257149409|emb|CAR88382.1| LSU/50S ribosomal protein L3P [Lactobacillus rhamnosus GG] gi|257152355|emb|CAR91327.1| LSU/50S ribosomal protein L3P [Lactobacillus rhamnosus Lc 705] gi|259650761|dbj|BAI42923.1| 50S ribosomal protein L3 [Lactobacillus rhamnosus GG] Length = 210 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 119/212 (56%), Gaps = 5/212 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY AVQ+G G+ + Sbjct: 3 RKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQVKTVESDGYEAVQLGYGDMREVLT 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G + +PK+ + E R VGS F G +VDVTG + G G+ Sbjct: 63 NKPSVGHAKKADTTPKRFVREIR-DVALSDYEVGSEVKADEFAAGDIVDVTGTSKGHGYQ 121 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +K+ HG S HR GS G +VFK KK+ GRMG + T++NL+VV+ Sbjct: 122 GNIKKDGQSRGPMAHG-SRYHRRPGSLGAI--INKVFKGKKLPGRMGNHTRTMQNLQVVA 178 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + ++L+KG VPGA K S++ +R + K+A Sbjct: 179 ADTEHNVLLIKGNVPGANK-SFVTIRSAVKAA 209 >gi|121706456|ref|XP_001271490.1| 50S ribosomal protein L3 [Aspergillus clavatus NRRL 1] gi|119399638|gb|EAW10064.1| 50S ribosomal protein L3 [Aspergillus clavatus NRRL 1] Length = 297 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 99/215 (46%), Positives = 140/215 (65%), Gaps = 3/215 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GMT VY+ G+RI TVL LD QVV H+T ++GY AVQ+GAG Sbjct: 72 LRTGAIAIKKGMTAVYDTETGKRIACTVLQLDRVQVVSHKTRQRHGYYAVQLGAGWKHPS 131 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV+K + G FS+ VSPK+ ++EFR++ + L+PVG + + S+F GQ VD + GKG Sbjct: 132 NVTKSLLGHFSTHGVSPKRHIYEFRIKDESGLVPVGEMINASWFQEGQYVDARSNSKGKG 191 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKRH F G +HGVS++HRS GS G Q G RV+ KKMAG MG + TV+NL+ Sbjct: 192 FAGVMKRHGFHGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLK 251 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++ VD + G+++V G V G K + ++D+ K Sbjct: 252 ILKVDPENGIVVVNGSVSGP-KGCVVRIQDAIKKP 285 >gi|160888399|ref|ZP_02069402.1| hypothetical protein BACUNI_00812 [Bacteroides uniformis ATCC 8492] gi|270294752|ref|ZP_06200953.1| 50S ribosomal protein L3 [Bacteroides sp. D20] gi|317477751|ref|ZP_07936944.1| 50S ribosomal protein L3 [Bacteroides sp. 4_1_36] gi|156862076|gb|EDO55507.1| hypothetical protein BACUNI_00812 [Bacteroides uniformis ATCC 8492] gi|270273999|gb|EFA19860.1| 50S ribosomal protein L3 [Bacteroides sp. D20] gi|316906096|gb|EFV27857.1| 50S ribosomal protein L3 [Bacteroides sp. 4_1_36] Length = 205 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 84/204 (41%), Positives = 125/204 (61%), Gaps = 4/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EG+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYEAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PKK L EF+ + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFNDATFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 + L+L+KG VPG K S +++ Sbjct: 181 IAEHNLLLIKGSVPGC-KGSIVII 203 >gi|50285271|ref|XP_445064.1| hypothetical protein [Candida glabrata CBS 138] gi|49524367|emb|CAG57964.1| unnamed protein product [Candida glabrata] Length = 263 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 100/212 (47%), Positives = 145/212 (68%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R G V +K+GM ++ + G RI T+L +N +V++HR LD++GY+A QVG G V Sbjct: 50 RCGAVTQKVGMMPYFDEKTGERIAATILQFNNVEVLMHRRLDEDGYVACQVGYGNRSVDK 109 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS+ M G F+++NV+PK+K+ EFRV+ ++ LLP+G+ P +FT GQ +DV ++ GKGF Sbjct: 110 VSRQMLGHFATLNVNPKEKVTEFRVKNEEGLLPIGTHIKPDFFTEGQYLDVRSVSKGKGF 169 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNF GLRA+HG S+ HR GS G QDPGRV KKM G MG VTV+N++++ Sbjct: 170 AGVMKRHNFKGLRASHGTSVMHRHGGSYGQNQDPGRVLPGKKMPGHMGVQNVTVQNVKIL 229 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD+ +I VKG VPG +++ ++D+ K Sbjct: 230 KVDEANNVIWVKGAVPGPN-GTYVKIQDAIKK 260 >gi|307694152|ref|ZP_07636389.1| 50S ribosomal protein L3 [Ruminococcaceae bacterium D16] Length = 241 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 82/221 (37%), Positives = 120/221 (54%), Gaps = 3/221 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ +K+GMT +++ G +PVTV+ C VV +T +K+GY A+Q+G + Sbjct: 1 MEKAIIGKKIGMTQIFDEAGHVVPVTVIEAGPCTVVQKKTAEKDGYEAIQLGYQTVPERK 60 Query: 61 VSKPMRGFFSSVNV-SPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G + KK L EFR+ D +G F G VDVTG++ G G Sbjct: 61 LTKPEVGHQKKAGLEELKKVLKEFRLD-DCSKYEIGDELKADVFAAGDRVDVTGISKGHG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 + G +KRH L+ THG HR G+ DP R+FK K AG+MG +VTV NL+V Sbjct: 120 YQGVIKRHGASRLKETHGTGPVHRHAGAMAANSDPSRIFKGKIGAGQMGNEQVTVMNLDV 179 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220 +SVD + G+I V+G +PG K + +R+S K KG Sbjct: 180 ISVDAELGIIAVRGAIPGP-KGGVVFLRNSVKKYFEPKGAA 219 >gi|312200020|ref|YP_004020081.1| 50S ribosomal protein L3 [Frankia sp. EuI1c] gi|311231356|gb|ADP84211.1| 50S ribosomal protein L3 [Frankia sp. EuI1c] Length = 232 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 96/213 (45%), Positives = 124/213 (58%), Gaps = 2/213 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ + R +P+TV+ V +T D +GY AVQ+G GE + +K Sbjct: 8 GLLGTKLGMTQVWDAQNRVVPITVIQAGPNVVTQVKTPDNDGYAAVQLGYGEIDPRKTNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P RG F++ V+P++ L E R D G S F G +VDVTG + GKGF+G Sbjct: 68 PTRGHFAAAGVTPRRHLAELR-TADAGNYSAGLQLDGSVFDAGTVVDVTGTSKGKGFAGV 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GL A HGV HRS GS G PGRVFK +MAGRMG RVTV L V +VD Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGNVRVTVAGLTVHAVD 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 +RGL+L+KG VPG + VR + K Sbjct: 187 AERGLLLIKGAVPGVD-GGLVFVRSAAKRPAPA 218 >gi|326203896|ref|ZP_08193758.1| 50S ribosomal protein L3 [Clostridium papyrosolvens DSM 2782] gi|325985994|gb|EGD46828.1| 50S ribosomal protein L3 [Clostridium papyrosolvens DSM 2782] Length = 212 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 87/214 (40%), Positives = 126/214 (58%), Gaps = 4/214 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT +++ G IPVTV+ VV +T++ +GY A++VG + K Sbjct: 1 MKKAMLGKKIGMTQIFDENGLVIPVTVVEAGPLTVVQKKTVETDGYNALKVGYQKVAEKK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119 +SKP G FS ++P K L EFR+ +D VG F G +DV+G++ GKG Sbjct: 61 LSKPALGQFSKTKLAPMKYLREFRL-EDISSYEVGQEIKAEDMFQSGDKIDVSGLSKGKG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR+ G THG S+ HR GS +P RVFK KK+ G MG + TV+NLEV Sbjct: 120 FQGTIKRYGQKGGPKTHG-SMYHRRVGSMSANTNPARVFKGKKLPGHMGMDNTTVQNLEV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V VD +R LILVKG +PG K ++++ + KS Sbjct: 179 VRVDAERNLILVKGALPGP-KGGLLVIKSTVKSG 211 >gi|169350795|ref|ZP_02867733.1| hypothetical protein CLOSPI_01569 [Clostridium spiroforme DSM 1552] gi|169292381|gb|EDS74514.1| hypothetical protein CLOSPI_01569 [Clostridium spiroforme DSM 1552] Length = 242 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 119/211 (56%), Gaps = 4/211 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+ +G IPVTV+ V+ +T+ +GY A+QVG + + K + Sbjct: 2 KGILGRKIGMTQVFTTDGLLIPVTVVEATENVVLQKKTVATDGYDAIQVGFEDKREKLAN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G N +PK+ + EFR + VG + F G++VDVTG + GKG+ G Sbjct: 62 KAELGIVKKANTAPKRFIKEFRFDEMMS-YEVGDKITVDSFVAGEVVDVTGTSKGKGYQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH HG S +HR GS G P R+ KK+ G+MG TV+NLE+V+V Sbjct: 121 VIKRHGQHIGPKGHG-SGAHRIVGSMGPIA-PNRIAPGKKLPGQMGHVTRTVQNLEIVAV 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + L+L+KG VPG KK ++V+ K+A Sbjct: 179 DVENNLLLIKGSVPGPKKG-LVIVKSGIKAA 208 >gi|218131327|ref|ZP_03460131.1| hypothetical protein BACEGG_02938 [Bacteroides eggerthii DSM 20697] gi|217986259|gb|EEC52596.1| hypothetical protein BACEGG_02938 [Bacteroides eggerthii DSM 20697] Length = 205 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 84/204 (41%), Positives = 125/204 (61%), Gaps = 4/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EG+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYQAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PKK L EF+ + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFEGADFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 + L+L+KG VPG K S +++ Sbjct: 181 IAEHNLLLIKGSVPGC-KGSIVII 203 >gi|148243215|ref|YP_001228372.1| 50S ribosomal protein L3 [Synechococcus sp. RCC307] gi|166234603|sp|A5GVW0|RL3_SYNR3 RecName: Full=50S ribosomal protein L3 gi|147851525|emb|CAK29019.1| 50S ribosomal protein L3 [Synechococcus sp. RCC307] Length = 215 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 87/216 (40%), Positives = 126/216 (58%), Gaps = 3/216 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ EGR +PVTV+ C++ +T +GY AVQVG G+ + K Sbjct: 1 MSIGILGKKLGMSQFFDDEGRAVPVTVIEAGPCRITQVKTPTNDGYSAVQVGFGDVREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++P +G + L E+RV D + +GS + F GQ VDV+G T+G+GF Sbjct: 61 VNQPAKGHLKKSGEDLLRHLKEYRVDSTDG-VELGSSVTVDAFEPGQKVDVSGDTMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRH F THG S +HR GSTG PGR++ K+MAGR GG + TVK L V+ Sbjct: 120 SGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGTKTTVKGLVVL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 VD +R L++VKG VPG + + +R + + Sbjct: 179 KVDSERNLLVVKGSVPGKP-GALLSIRPAVRVGAKA 213 >gi|291286312|ref|YP_003503128.1| 50S ribosomal protein L3 [Denitrovibrio acetiphilus DSM 12809] gi|290883472|gb|ADD67172.1| 50S ribosomal protein L3 [Denitrovibrio acetiphilus DSM 12809] Length = 211 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 92/213 (43%), Positives = 127/213 (59%), Gaps = 5/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVK 59 M ++ +K+GMT V+N +G +PVTV+ C V RT +K+GY A+Q+G E K Sbjct: 1 MAKAIIGKKVGMTQVFNEDGTVVPVTVVLAGPCVVTEVRTEEKDGYSAIQLGFDEIVKET 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KPM G+F V P K L EFR + + + VG + F G LVDV G +IGKG Sbjct: 61 RVNKPMAGYFKKQGVKPMKFLKEFRGEAGE--ITVGQQVDVNVFEEGDLVDVQGTSIGKG 118 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKRH F G THG HR+ GS G + PG K +KM GRMGG +VTV+NL V Sbjct: 119 FQGVMKRHGFAGGPKTHGSH-FHRAPGSIGMCEFPGETPKGRKMPGRMGGKKVTVQNLSV 177 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V V + L+LVKG +PG ++ + ++++ K+ Sbjct: 178 VKVIPETNLLLVKGAIPG-HDDAIVYIKEAVKA 209 >gi|317968817|ref|ZP_07970207.1| 50S ribosomal protein L3 [Synechococcus sp. CB0205] Length = 215 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 86/216 (39%), Positives = 126/216 (58%), Gaps = 3/216 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ EGR IPVTV+ C++ +T +GY AVQ+G G+ + K Sbjct: 1 MSIGILGKKLGMSQFFDDEGRAIPVTVIEAGPCRITQLKTDSTDGYTAVQLGFGDIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKP +G + + L E+RV D L +G + + F GQ VDV+G TIG+GF Sbjct: 61 VSKPAKGHLAKSGDELLRHLKEYRVDSVDG-LELGGDVTVAAFEAGQKVDVSGDTIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F THG S +HR GSTG PGRV+ K+MAGR GG ++T + L ++ Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRVYPGKRMAGRYGGKQITTRGLTIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 VD +R L++VKG VPG + + + + + Sbjct: 179 KVDAERNLLVVKGSVPGKP-GALLNILPAKRVGAKA 213 >gi|116072564|ref|ZP_01469830.1| 50S ribosomal protein L3 [Synechococcus sp. BL107] gi|116064451|gb|EAU70211.1| 50S ribosomal protein L3 [Synechococcus sp. BL107] Length = 218 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 82/219 (37%), Positives = 128/219 (58%), Gaps = 4/219 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +GR +PVT++ C++ + D +GY AVQ+G GE + K Sbjct: 1 MSIGILGKKLGMSQLFDEQGRAVPVTLIEAGPCRITQLKNDDTDGYAAVQIGFGETREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + + L E+RV D L +G + S F GQ VDV+G T+G+GF Sbjct: 61 INKPSKGHLTKSGEDLLRHLREYRVDNVDG-LELGGSITVSDFEAGQKVDVSGDTMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F THG S +HR GS G PGR++ K+M+GR GG + T + L ++ Sbjct: 120 AGLQKRHGFSRGPMTHG-SKNHRQPGSIGAGTTPGRIYPGKRMSGRYGGKKTTTRGLTIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK-SAVNCKG 218 VD R L++VKG VPG + + ++ + + A KG Sbjct: 179 RVDSDRNLLVVKGSVPGKP-GALLNIKPAVRVGAKPAKG 216 >gi|188584836|ref|YP_001916381.1| LSU ribosomal protein L3P [Natranaerobius thermophilus JW/NM-WN-LF] gi|226730540|sp|B2A4D9|RL3_NATTJ RecName: Full=50S ribosomal protein L3 gi|179349523|gb|ACB83793.1| LSU ribosomal protein L3P [Natranaerobius thermophilus JW/NM-WN-LF] Length = 210 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 90/212 (42%), Positives = 124/212 (58%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT +++ EG +PVTV+ C VV + D +GY AVQ+G + K Sbjct: 1 MKKAILGKKVGMTQIFSEEGEVMPVTVVKAGPCSVVQKKVEDTDGYNAVQIGFEDKKENK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 KP +G F V+PKK L EF ++ ++ L VG + F VG +DVTG + KGF Sbjct: 61 TKKPEKGHFEKAGVNPKKHLTEFELESMEN-LEVGQELTVEQFEVGDQIDVTGTSKSKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR THG S +R+ GS G D RVFK + + GRMGGN VTV+ LEVV Sbjct: 120 QGTIKRFKHSTGPKTHG-SRFYRAPGSLGSM-DISRVFKGQTLPGRMGGNTVTVQRLEVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + L+LVKG VPG KK + + DS K+ Sbjct: 178 DVDKENNLLLVKGAVPGPKKG-LLKIVDSVKA 208 >gi|116617329|ref|YP_817700.1| 50S ribosomal protein L3P [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122272470|sp|Q03ZP5|RL3_LEUMM RecName: Full=50S ribosomal protein L3 gi|116096176|gb|ABJ61327.1| LSU ribosomal protein L3P [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 228 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 83/219 (37%), Positives = 118/219 (53%), Gaps = 8/219 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G I VT + V+ + + +GY A+Q+G + + Sbjct: 1 MTKGILGRKVGMTQVFTESGELIAVTAVEATPNVVLQVKNAETDGYSAIQLGYQDKRTVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G S N +PK+ + E ++ D VG F G+ VDVTG+T G GF Sbjct: 61 SNKPEQGHASKANTAPKRYVRE--IRNAGDEFNVGDEIKVDTFQAGEYVDVTGITKGHGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR THG S HR GS G RVFK K + GRMG N+ T++N+ +V Sbjct: 119 QGAIKRLGQSRGPMTHG-SRYHRRPGSMGAI--INRVFKGKLLPGRMGNNKRTMQNIAIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 VD + L+L+KG VPGA K S + V+ + K VN K Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTVKSTVK--VNAKHP 211 >gi|325921481|ref|ZP_08183336.1| LSU ribosomal protein L3P [Xanthomonas gardneri ATCC 19865] gi|325548028|gb|EGD19027.1| LSU ribosomal protein L3P [Xanthomonas gardneri ATCC 19865] Length = 216 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 93/210 (44%), Positives = 128/210 (60%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G V RK GM+ V+ +GR +PVT++ ++ +T++ +GY AVQ+ G + V+K Sbjct: 8 GFVGRKAGMSRVFTEDGRSVPVTLIEATPNRIAQIKTVEADGYSAVQITVGARRAALVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P G F+ V + L+EFRV+ VG F VGQ VDV G+T GKGF G Sbjct: 68 PAAGHFAKAKVEAGRGLWEFRVEDAQLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQG 127 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR+NF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + + +NLEVV V Sbjct: 128 TIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVKV 187 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +RGLI ++G VPGA ++VR + K+ Sbjct: 188 DVERGLIAIRGAVPGAAGGD-VIVRPASKA 216 >gi|160883064|ref|ZP_02064067.1| hypothetical protein BACOVA_01027 [Bacteroides ovatus ATCC 8483] gi|260175416|ref|ZP_05761828.1| 50S ribosomal protein L3 [Bacteroides sp. D2] gi|299144624|ref|ZP_07037692.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_23] gi|315923646|ref|ZP_07919886.1| 50S ribosomal protein L3 [Bacteroides sp. D2] gi|156111536|gb|EDO13281.1| hypothetical protein BACOVA_01027 [Bacteroides ovatus ATCC 8483] gi|298515115|gb|EFI38996.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_23] gi|313697521|gb|EFS34356.1| 50S ribosomal protein L3 [Bacteroides sp. D2] Length = 205 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 84/204 (41%), Positives = 124/204 (60%), Gaps = 4/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PK+ L EF+ D L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKRAGVTPKRHLAEFKEFGTD--LNLGDTITVEMFNDANFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG +ATHG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 L+L+KG +PG K S +L+ Sbjct: 181 IADHNLLLIKGSIPGC-KGSIVLI 203 >gi|239980056|ref|ZP_04702580.1| 50S ribosomal protein L3 [Streptomyces albus J1074] Length = 200 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 93/202 (46%), Positives = 121/202 (59%), Gaps = 2/202 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V++ R +PVTV+ V RT D +GY AVQ+ GE + V+KP++G F+ Sbjct: 1 MTQVWDENNRVVPVTVVKAGANVVTQVRTNDTDGYEAVQIAFGEIDPRKVNKPLKGHFAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF G Sbjct: 61 ADVTPRRHLVEIR-TADASEYTLGQELNADTFEAGLKVDVTGKSKGKGFAGVMKRHNFKG 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 L A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +VD ++GL+L+ Sbjct: 120 LGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVDAEKGLLLI 179 Query: 192 KGCVPGAKKNSWILVRDSFKSA 213 KG VPG +LVR + K A Sbjct: 180 KGAVPGPN-GGLVLVRTAAKGA 200 >gi|256819982|ref|YP_003141261.1| 50S ribosomal protein L3 [Capnocytophaga ochracea DSM 7271] gi|315225401|ref|ZP_07867215.1| 50S ribosomal protein L3 [Capnocytophaga ochracea F0287] gi|256581565|gb|ACU92700.1| ribosomal protein L3 [Capnocytophaga ochracea DSM 7271] gi|314944674|gb|EFS96709.1| 50S ribosomal protein L3 [Capnocytophaga ochracea F0287] Length = 205 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 82/205 (40%), Positives = 127/205 (61%), Gaps = 4/205 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP T++ C V RT + +GY A+Q+G + K + Sbjct: 2 SGLIGKKVGMTSIFDENGKNIPCTIIEAGPCVVTQVRTKEVDGYDALQLGFDDKAEKRAT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F S KKK+ EF+ +D+ +G + +FT G+ VD+TG++ GKGF G Sbjct: 62 KAELGHFKKAGTSVKKKVVEFQGFEDN--YKLGDTITVDFFTEGEFVDITGVSKGKGFQG 119 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 ++RH FGG + THG R+ GS G P RVFK +MAGRMG +VTV+NL+V+ Sbjct: 120 VVRRHGFGGVGQTTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 V ++ L++VKGC+PG KN+++ + Sbjct: 180 VVAEKNLLVVKGCIPG-HKNAYVTI 203 >gi|296126865|ref|YP_003634117.1| 50S ribosomal protein L3 [Brachyspira murdochii DSM 12563] gi|296018681|gb|ADG71918.1| 50S ribosomal protein L3 [Brachyspira murdochii DSM 12563] Length = 217 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 83/204 (40%), Positives = 116/204 (56%), Gaps = 3/204 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +KLGMT V++ G I VTV+ C V+ R +K+GY A+Q+G G K K++ Sbjct: 2 VGIIGKKLGMTTVFDETGNAIAVTVVEAGPCTVMQIRDNEKDGYSAIQLGYGAVKEKHLK 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F N+ PKK L EFR+ VG F G +DV+ ++ G+GF+G Sbjct: 62 KPQIGQFKKANLEPKKYLKEFRMDNTSS-YTVGQELKADVFQAGDFIDVSSLSKGRGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHN+ G +HG S R GS GC P RV+K K M G MG T++NL+VV + Sbjct: 121 VMKRHNYDGGPMSHG-SNFRRRAGSIGCNSYPARVWKGKGMPGHMGNALTTIQNLKVVEI 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 LI++KG +PGA NS + + Sbjct: 180 RPDDNLIMIKGAIPGAV-NSIVKL 202 >gi|224537817|ref|ZP_03678356.1| hypothetical protein BACCELL_02704 [Bacteroides cellulosilyticus DSM 14838] gi|224520503|gb|EEF89608.1| hypothetical protein BACCELL_02704 [Bacteroides cellulosilyticus DSM 14838] Length = 205 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 84/204 (41%), Positives = 125/204 (61%), Gaps = 4/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EG+ +P TV+ C V ++++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKSVEKDGYAAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PKK L EF+ + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFNDVTFVDVIGTSKGKGFQGV 120 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG +ATHG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 L+L+KG VPG K S +++ Sbjct: 181 LPDHNLLLIKGSVPGC-KGSIVII 203 >gi|227499195|ref|ZP_03929330.1| 50S ribosomal protein L3 [Acidaminococcus sp. D21] gi|226904642|gb|EEH90560.1| 50S ribosomal protein L3 [Acidaminococcus sp. D21] Length = 219 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 91/221 (41%), Positives = 134/221 (60%), Gaps = 5/221 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT ++ +G +PVTV+ C V+ ++T + +GY A+Q+G G+ K K+ Sbjct: 1 MARGILGKKLGMTQIFEADGTLVPVTVVEAGPCVVLANKTEETDGYNAIQLGFGDIKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+GFF V+P K + EFR+ + + VG + F G LVD G++ GKGF Sbjct: 61 VNKPMKGFFDKAGVAPVKFVREFRLAEASE-YKVGDKIAADIFAAGDLVDAIGVSRGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 +G ++RHNF HG S SHR GS G GRV K KK+ GR+GG TV+ L Sbjct: 120 AGTIERHNFARGPMKHG-SKSHREPGSNGPMHSGPGGRVIKGKKLPGRLGGQSATVQRLT 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 + VD +R LI+VKG VPGA +++++RD+ + V K Sbjct: 179 IAKVDAERNLIMVKGSVPGAA-GTFLMLRDTVRPVVKKADK 218 >gi|238492064|ref|XP_002377269.1| 50S ribosomal protein L3 [Aspergillus flavus NRRL3357] gi|220697682|gb|EED54023.1| 50S ribosomal protein L3 [Aspergillus flavus NRRL3357] Length = 296 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 98/214 (45%), Positives = 138/214 (64%), Gaps = 3/214 (1%) Query: 2 RSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R+G +A K GMT +Y+ G+RI TVL LD +V+ H+T ++GY AVQVG+G N Sbjct: 72 RTGAIAIKKGMTALYDTETGKRIACTVLQLDRVEVISHKTRQQHGYFAVQVGSGWKHPNN 131 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++K + G FS +SPK+ +FEFRV+ ++ LLPVG + +F GQ VD T GKGF Sbjct: 132 LTKSLLGHFSVNGISPKRHIFEFRVRDENGLLPVGQAINADWFQEGQYVDARSNTKGKGF 191 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179 +G MKRH FGG +HGVS++HRS GS G Q G RV+ KKMAG MG + TV+NL++ Sbjct: 192 AGVMKRHGFGGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLKI 251 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + VD + G+++V G V G K + ++D+ K Sbjct: 252 LKVDSQNGIVVVNGAVSGP-KGCIVRIQDAIKKP 284 >gi|169774031|ref|XP_001821484.1| 54S ribosomal protein L9 [Aspergillus oryzae RIB40] gi|83769345|dbj|BAE59482.1| unnamed protein product [Aspergillus oryzae] Length = 296 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 98/214 (45%), Positives = 138/214 (64%), Gaps = 3/214 (1%) Query: 2 RSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R+G +A K GMT +Y+ G+RI TVL LD +V+ H+T ++GY AVQVG+G N Sbjct: 72 RTGAIAIKKGMTALYDTETGKRIACTVLQLDRVEVISHKTRQQHGYFAVQVGSGWKHPNN 131 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++K + G FS +SPK+ +FEFRV+ ++ LLPVG + +F GQ VD T GKGF Sbjct: 132 LTKSLLGHFSVNGISPKRHIFEFRVRDENGLLPVGQAINADWFQEGQYVDARSNTKGKGF 191 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179 +G MKRH FGG +HGVS++HRS GS G Q G RV+ KKMAG MG + TV+NL++ Sbjct: 192 AGVMKRHGFGGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLKI 251 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + VD + G+++V G V G K + ++D+ K Sbjct: 252 LKVDSQNGIVVVNGAVSGP-KGCIVRIQDAIKKP 284 >gi|153805957|ref|ZP_01958625.1| hypothetical protein BACCAC_00202 [Bacteroides caccae ATCC 43185] gi|149130634|gb|EDM21840.1| hypothetical protein BACCAC_00202 [Bacteroides caccae ATCC 43185] Length = 205 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 82/204 (40%), Positives = 124/204 (60%), Gaps = 4/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PK+ L EF+ + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKRAGVTPKRHLAEFK--EFETELNLGDTVTVELFNDANFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 L+L+KG +PG K S +L+ Sbjct: 181 IADHNLLLIKGSIPGC-KGSIVLI 203 >gi|329956703|ref|ZP_08297276.1| 50S ribosomal protein L3 [Bacteroides clarus YIT 12056] gi|328524075|gb|EGF51151.1| 50S ribosomal protein L3 [Bacteroides clarus YIT 12056] Length = 205 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 84/204 (41%), Positives = 125/204 (61%), Gaps = 4/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EG+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYQAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PKK L EF+ + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFEGVDFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 + L+L+KG VPG K S +++ Sbjct: 181 IAEHNLLLIKGSVPGC-KGSIVII 203 >gi|125975384|ref|YP_001039294.1| 50S ribosomal protein L3P [Clostridium thermocellum ATCC 27405] gi|256005329|ref|ZP_05430295.1| ribosomal protein L3 [Clostridium thermocellum DSM 2360] gi|281419346|ref|ZP_06250361.1| 50S ribosomal protein L3 [Clostridium thermocellum JW20] gi|166233136|sp|A3DJH2|RL3_CLOTH RecName: Full=50S ribosomal protein L3 gi|125715609|gb|ABN54101.1| LSU ribosomal protein L3P [Clostridium thermocellum ATCC 27405] gi|255990765|gb|EEU00881.1| ribosomal protein L3 [Clostridium thermocellum DSM 2360] gi|281406966|gb|EFB37229.1| 50S ribosomal protein L3 [Clostridium thermocellum JW20] gi|316939500|gb|ADU73534.1| 50S ribosomal protein L3 [Clostridium thermocellum DSM 1313] Length = 212 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 90/213 (42%), Positives = 131/213 (61%), Gaps = 4/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ RK+GMT V++ +G IPVTV+ VV + + +GY +V+V G+ + K Sbjct: 1 MEKFMLGRKIGMTQVFDEDGLLIPVTVIEAGPITVVQKKKPETDGYNSVRVAFGDVQEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119 ++KP +G F+ + ++PKK + EFRV D D + F G VDVTG++ GKG Sbjct: 61 LNKPEKGLFAKLGIAPKKYIREFRVD-DPDKYELKQEIKVEEMFQPGDRVDVTGISKGKG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KR + THG S+ HR GS G +P RVFK KK+ G MG RVTV+NL+V Sbjct: 120 FAGVIKRFGNRRGKETHG-SMYHRRVGSMGANTNPARVFKGKKLPGHMGVERVTVQNLDV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LVKG VPGA K ++++D+ K+ Sbjct: 179 VKVDAERNLMLVKGAVPGA-KGGLLMIKDTVKA 210 >gi|58583207|ref|YP_202223.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84625044|ref|YP_452416.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|81311762|sp|Q5GWT3|RL3_XANOR RecName: Full=50S ribosomal protein L3 gi|109893572|sp|Q2NZY5|RL3_XANOM RecName: Full=50S ribosomal protein L3 gi|212288596|sp|B2SQR0|RL3_XANOP RecName: Full=50S ribosomal protein L3 gi|58427801|gb|AAW76838.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84368984|dbj|BAE70142.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 216 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 92/210 (43%), Positives = 127/210 (60%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G V RK GM+ ++ +GR +PVT++ ++ +T++ +GY AVQ+ G + V+K Sbjct: 8 GFVGRKAGMSRIFTEDGRSVPVTLIEATPNRIAQIKTVEVDGYSAVQITVGARRAALVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P G F+ V + L+EFRV+ VG F VGQ VDV G+T GKGF G Sbjct: 68 PAAGHFAKAKVEAGRGLWEFRVEDAHLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQG 127 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR+NF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + + +NLEVV V Sbjct: 128 TIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVKV 187 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +RGLI + G VPGA ++VR + K+ Sbjct: 188 DVERGLIAIHGAVPGAAGGD-VIVRPASKA 216 >gi|21241737|ref|NP_641319.1| 50S ribosomal protein L3 [Xanthomonas axonopodis pv. citri str. 306] gi|78046555|ref|YP_362730.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|294627843|ref|ZP_06706422.1| 50S ribosomal protein L3 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294663996|ref|ZP_06729410.1| 50S ribosomal protein L3 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325925387|ref|ZP_08186789.1| LSU ribosomal protein L3P [Xanthomonas perforans 91-118] gi|42559654|sp|Q8PNS4|RL3_XANAC RecName: Full=50S ribosomal protein L3 gi|109893571|sp|Q3BWY3|RL3_XANC5 RecName: Full=50S ribosomal protein L3 gi|21107108|gb|AAM35855.1| 50S ribosomal protein L3 [Xanthomonas axonopodis pv. citri str. 306] gi|78034985|emb|CAJ22630.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|292597757|gb|EFF41915.1| 50S ribosomal protein L3 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292606225|gb|EFF49462.1| 50S ribosomal protein L3 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325544265|gb|EGD15646.1| LSU ribosomal protein L3P [Xanthomonas perforans 91-118] Length = 216 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 94/210 (44%), Positives = 128/210 (60%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G V RK GM+ V+ +GR +PVT++ ++ +T++ +GY AVQV G + V+K Sbjct: 8 GFVGRKAGMSRVFTEDGRSVPVTLIEATPNRIAQIKTVEVDGYSAVQVTVGARRAALVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P G F+ V + L+EFRV+ VG F VGQ VDV G+T GKGF G Sbjct: 68 PAAGHFAKAKVEAGRGLWEFRVEDAQLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQG 127 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR+NF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + + +NLEVV V Sbjct: 128 TIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVKV 187 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +RGLI ++G VPGA ++VR + K+ Sbjct: 188 DVERGLIAIRGAVPGAAGGD-VIVRPASKA 216 >gi|116075767|ref|ZP_01473026.1| 50S ribosomal protein L3 [Synechococcus sp. RS9916] gi|116067082|gb|EAU72837.1| 50S ribosomal protein L3 [Synechococcus sp. RS9916] Length = 218 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 79/216 (36%), Positives = 127/216 (58%), Gaps = 3/216 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ +G+ +PVT++ C++ +T + +GY AVQ+G GE + K Sbjct: 1 MSIGILGKKLGMSQFFDEQGKAVPVTLIEAGPCRITQLKTSETDGYSAVQIGFGETRDKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + + L E+RV D +G+ + F GQ VDV+G ++G+GF Sbjct: 61 INKPAKGHLAKSGEELLRHLSEYRVD-DVSGFELGNQVTVGDFEAGQKVDVSGDSMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F THG S +HR GSTG PGR++ K+MAGR GG ++T + L ++ Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLTII 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 VD +R L++VKG VPG S + +R + + Sbjct: 179 KVDSERNLLVVKGSVPGKP-GSLLNIRPANRVGAKP 213 >gi|21230364|ref|NP_636281.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769642|ref|YP_244404.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris str. 8004] gi|166710831|ref|ZP_02242038.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzicola BLS256] gi|188992854|ref|YP_001904864.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris str. B100] gi|42559653|sp|Q8PC49|RL3_XANCP RecName: Full=50S ribosomal protein L3 gi|81304403|sp|Q4URD9|RL3_XANC8 RecName: Full=50S ribosomal protein L3 gi|226730589|sp|B0RU82|RL3_XANCB RecName: Full=50S ribosomal protein L3 gi|21111920|gb|AAM40205.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574974|gb|AAY50384.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris str. 8004] gi|167734614|emb|CAP52824.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris] Length = 216 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 93/210 (44%), Positives = 128/210 (60%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G V RK GM+ V+ +GR +PVT++ ++ +T++ +GY AVQ+ G + V+K Sbjct: 8 GFVGRKAGMSRVFTEDGRSVPVTLIEATPNRIAQIKTVEVDGYSAVQITVGARRAALVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P G F+ V + L+EFRV+ VG F VGQ VDV G+T GKGF G Sbjct: 68 PAAGHFAKAKVEAGRGLWEFRVEDAQLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQG 127 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR+NF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + + +NLEVV V Sbjct: 128 TIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVKV 187 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +RGLI ++G VPGA ++VR + K+ Sbjct: 188 DVERGLIAIRGAVPGAAGGD-VIVRPASKA 216 >gi|93005314|ref|YP_579751.1| 50S ribosomal protein L3 [Psychrobacter cryohalolentis K5] gi|109893543|sp|Q1QDI6|RL3_PSYCK RecName: Full=50S ribosomal protein L3 gi|92392992|gb|ABE74267.1| LSU ribosomal protein L3P [Psychrobacter cryohalolentis K5] Length = 212 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 93/213 (43%), Positives = 130/213 (61%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V +K GMT V+ G IPVTV+ + ++ + D +GY A+QV G + Sbjct: 1 MAIGLVGKKCGMTRVFTEAGASIPVTVVEISANRITQVKNTDVDGYQAIQVTTGTRRDSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFR-VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+ +G F+ V+ + ++EFR D + +G F GQ+VDVTG + GKG Sbjct: 61 VTAAQKGHFAKAGVAAGRGVWEFRANDSDLEGREIGGEILADLFEQGQMVDVTGNSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KRHNF ATHG S+SHR+ GSTG Q PG+VFK KKM G+MG RVTV+ LEV Sbjct: 121 FQGGVKRHNFSMQDATHGNSVSHRAIGSTGQNQSPGKVFKGKKMPGQMGNKRVTVQGLEV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +SVD + GL+++KG +PGA ++VR S K+ Sbjct: 181 ISVDVENGLLVIKGAIPGATGGD-VIVRPSVKA 212 >gi|6321659|ref|NP_011736.1| Mrpl9p [Saccharomyces cerevisiae S288c] gi|1710598|sp|P31334|RM09_YEAST RecName: Full=54S ribosomal protein L9, mitochondrial; AltName: Full=YmL9; Flags: Precursor gi|886912|emb|CAA61168.1| ORF 269 [Saccharomyces cerevisiae] gi|1323396|emb|CAA97248.1| MRPL9 [Saccharomyces cerevisiae] gi|45270438|gb|AAS56600.1| YGR220C [Saccharomyces cerevisiae] gi|151943496|gb|EDN61807.1| YmL9 [Saccharomyces cerevisiae YJM789] gi|190406772|gb|EDV10039.1| 60S ribosomal protein L9, mitochondrial precursor [Saccharomyces cerevisiae RM11-1a] gi|207344963|gb|EDZ71935.1| YGR220Cp-like protein [Saccharomyces cerevisiae AWRI1631] gi|256272642|gb|EEU07619.1| Mrpl9p [Saccharomyces cerevisiae JAY291] gi|259146721|emb|CAY79978.1| Mrpl9p [Saccharomyces cerevisiae EC1118] gi|285812413|tpg|DAA08313.1| TPA: Mrpl9p [Saccharomyces cerevisiae S288c] Length = 269 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 98/212 (46%), Positives = 139/212 (65%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R G++ RK GM ++ G R T+L ++N +V++HRT + NGY A QVG G + Sbjct: 58 RCGLITRKKGMMPYFDKSTGERSAATILEVNNVEVIMHRTSEVNGYFACQVGYGSRHLSK 117 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS+ M G F+S V+PK+ + EFRV+ + L+P G++ PS+F GQ VDV ++ GKGF Sbjct: 118 VSRQMLGHFASKVVNPKEHVAEFRVKDEKGLIPPGTLLKPSFFKEGQYVDVRSVSKGKGF 177 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR+ F GLRA+HG SI HR GS G QDPGRV +KM G MG VT++N++V+ Sbjct: 178 TGVMKRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVL 237 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VDD+ +I VKG V G KNS++ ++D+ K Sbjct: 238 KVDDENNVIWVKGSVAGP-KNSFVKIQDAIKK 268 >gi|89891148|ref|ZP_01202656.1| 50S ribosomal protein L3 (rplC) [Flavobacteria bacterium BBFL7] gi|89516792|gb|EAS19451.1| 50S ribosomal protein L3 (rplC) [Flavobacteria bacterium BBFL7] Length = 205 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 85/206 (41%), Positives = 126/206 (61%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ RK+GMT +Y+ G+ +P T++ C V RT + +GY A+Q+G + KN S Sbjct: 2 SGLIGRKIGMTSIYDENGKNMPCTIIEAGPCVVTQVRTEEVDGYSALQLGFDDKSDKNAS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K +G F KKK+ EF+ D++ +G S FT G+ +DV+G + GKGF G Sbjct: 62 KAAQGHFKKAGTGVKKKVVEFQGF--DEVYKLGDAISVDIFTEGEFIDVSGTSKGKGFQG 119 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH F G +ATHG R+ GS G P RVFK +MAG+MG +V V+NL V+ Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGQMGNEKVKVENLRVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L++VKGCVPG KNS+++++ Sbjct: 180 VVPEKNLLVVKGCVPG-HKNSYVILQ 204 >gi|156044218|ref|XP_001588665.1| hypothetical protein SS1G_10212 [Sclerotinia sclerotiorum 1980] gi|154694601|gb|EDN94339.1| hypothetical protein SS1G_10212 [Sclerotinia sclerotiorum 1980 UF-70] Length = 311 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 92/215 (42%), Positives = 133/215 (61%), Gaps = 3/215 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G + K GMT +Y+ G R P TV+ LD QVV H+T +KNGY AVQVGAG Sbjct: 74 LRTGALGIKKGMTALYDPETGVRTPCTVVQLDRVQVVAHKTREKNGYYAVQVGAGWKHPS 133 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NVS+P G F + V+PK+ + EFRV+ + LL VG +F GQ VD + G G Sbjct: 134 NVSRPELGHFEASEVAPKRHMAEFRVKNEGGLLEVGRSIGAEWFIEGQFVDARANSRGMG 193 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+G MK+ + G A+HG S +HR+ GS G Q G RV K+MAGRMG ++VT++N++ Sbjct: 194 FAGGMKKWGWSGQPASHGNSKNHRTMGSAGASQGSGSRVHPGKRMAGRMGNHQVTIQNVK 253 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V+ VD ++GL+++ GC+ G + ++D+ K Sbjct: 254 VLKVDAEKGLVILNGCIAGPD-GCVVKIQDAIKKP 287 >gi|289665137|ref|ZP_06486718.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289669344|ref|ZP_06490419.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 216 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 92/210 (43%), Positives = 127/210 (60%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G V RK GM+ + +GR +PVT++ ++ +T++ +GY AVQ+ G + V+K Sbjct: 8 GFVGRKAGMSRFFTEDGRSVPVTLIEATPNRIAQIKTVEVDGYSAVQITVGARRAALVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P G F+ V + L+EFRV+ VG F VGQ VDV G+T GKGF G Sbjct: 68 PAAGHFAKAKVEAGRGLWEFRVEDAQLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQG 127 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR+NF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + + +NLEVV V Sbjct: 128 TIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVKV 187 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +RGLI ++G VPGA ++VR + K+ Sbjct: 188 DVERGLIAIRGAVPGAAGGD-VIVRPASKA 216 >gi|57867723|ref|YP_189394.1| 50S ribosomal protein L3 [Staphylococcus epidermidis RP62A] gi|81819347|sp|Q5HLZ9|RL3_STAEQ RecName: Full=50S ribosomal protein L3 gi|57638381|gb|AAW55169.1| ribosomal protein L3 [Staphylococcus epidermidis RP62A] Length = 220 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 93/221 (42%), Positives = 122/221 (55%), Gaps = 11/221 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60 Query: 54 -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 G K +KP G + +PK+ + EFR + D VG S F G ++DVT Sbjct: 61 KGSKSNKYANKPAEGHAKKADTAPKRFIREFR-NLNVDEYEVGQEVSVDTFETGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH G HG HR+ GS G D +VFK +KM GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQGRGPMAHGSH-FHRAPGSVGMASDASKVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 TV+NLEVV VD + +ILVKG VPG KK + + S K Sbjct: 179 TVQNLEVVQVDTENSVILVKGNVPGPKKG-LVEITTSIKKG 218 >gi|302543361|ref|ZP_07295703.1| 50S ribosomal protein L3 [Streptomyces hygroscopicus ATCC 53653] gi|302460979|gb|EFL24072.1| 50S ribosomal protein L3 [Streptomyces himastatinicus ATCC 53653] Length = 214 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 98/211 (46%), Positives = 127/211 (60%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGMT V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+ Sbjct: 6 KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTDDADGYDAVQIAFGEIDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKG +G Sbjct: 66 KPLKGHFAKADVTPRRHLVELR-TADASEYTLGQEVTAEAFESGVKVDVTGTSKGKGTAG 124 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGGL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V Sbjct: 125 VMKRHGFGGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+L+KG VPG +LVR + K A Sbjct: 185 DAEKGLLLIKGAVPGPN-GGLVLVRTAAKGA 214 >gi|315659227|ref|ZP_07912091.1| 50S ribosomal protein L3 [Staphylococcus lugdunensis M23590] gi|315495652|gb|EFU83983.1| 50S ribosomal protein L3 [Staphylococcus lugdunensis M23590] Length = 220 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 91/221 (41%), Positives = 121/221 (54%), Gaps = 11/221 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG + + Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60 Query: 61 V--------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 +KP G +PK+ + EFR D+ VG S F G ++DVT Sbjct: 61 KDAKSNKYATKPAEGHAKKAGTAPKRFIREFRNVNVDE-YEVGQEVSVDTFEAGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH HG HR+ GS G D RVFK +K GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMAHGSH-FHRAPGSVGMASDASRVFKGQKAPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V+NLEVV VD + G+ILVKG VPGAKK + ++ S K Sbjct: 179 IVQNLEVVQVDTENGVILVKGNVPGAKKG-LVEIKSSIKKG 218 >gi|325294396|ref|YP_004280910.1| 50S ribosomal protein L3 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064844|gb|ADY72851.1| 50S ribosomal protein L3 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 207 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 84/207 (40%), Positives = 117/207 (56%), Gaps = 5/207 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--VKN 60 G++ RK+GMT ++ +G+ I VTV+ C VV RT +++GY A+Q+G E Sbjct: 2 KGILGRKVGMTQIFTEDGKAIAVTVIEAGPCTVVQKRTPERDGYSALQLGFMEKNKHESK 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 KP+ G F + P + L E + D VG + F G+ VD+TG + G+GF Sbjct: 62 FPKPLLGHFKKAGIKPTRWLKEVKFDN-IDQYNVGDKITVEIFQPGEKVDITGTSKGRGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH FGG R +HG S H GS G PGRV K K+MAG G VT++NLE+V Sbjct: 121 AGYHKRHGFGGGRKSHG-SDFHEGPGSIGACAFPGRVHKGKRMAGHYGNETVTIRNLEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ LILVKG VPG K ++V+ Sbjct: 180 DVIPEKNLILVKGSVPG-HKGGLVIVK 205 >gi|319900924|ref|YP_004160652.1| LSU ribosomal protein L3P [Bacteroides helcogenes P 36-108] gi|319415955|gb|ADV43066.1| LSU ribosomal protein L3P [Bacteroides helcogenes P 36-108] Length = 205 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 84/204 (41%), Positives = 125/204 (61%), Gaps = 4/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EG+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PKK L EF+ + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFNDATFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 + L+L+KG VPG K S +++ Sbjct: 181 IAEHNLLLIKGSVPGC-KGSIVII 203 >gi|242243947|ref|ZP_04798390.1| 50S ribosomal protein L3 [Staphylococcus epidermidis W23144] gi|242232580|gb|EES34892.1| 50S ribosomal protein L3 [Staphylococcus epidermidis W23144] gi|319400623|gb|EFV88848.1| 50S ribosomal protein L3 [Staphylococcus epidermidis FRI909] Length = 220 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 92/221 (41%), Positives = 122/221 (55%), Gaps = 11/221 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60 Query: 54 -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 G K +KP G + +PK+ + EFR D+ VG S F G ++DVT Sbjct: 61 KGSKSNKYANKPAEGHAKKADTAPKRFIREFRNVNVDE-YEVGQEVSVDTFETGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH G HG HR+ GS G D +VFK +KM GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQGRGPMAHGSH-FHRAPGSVGMASDASKVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 TV+NLEVV +D + +ILVKG VPG KK + + S K Sbjct: 179 TVQNLEVVQIDTENSVILVKGNVPGPKKG-LVEITTSIKKG 218 >gi|219113447|ref|XP_002186307.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|209583157|gb|ACI65777.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 229 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 104/215 (48%), Positives = 143/215 (66%), Gaps = 5/215 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G + K+GM +++ G R P T+L LDN V+ ++++++GY AVQ+ AG+ K KNV Sbjct: 16 RCGALGIKVGMMPLFDDWGVRHPCTILFLDNNVVLGQKSIEQHGYWAVQIAAGQRKRKNV 75 Query: 62 SKPMRGFFSSV----NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 + G + + N +P + EFRV L+PVG+ +F GQ VDV+G++ G Sbjct: 76 GVSVLGQYKHILEDENENPPYLVREFRVSDGAHLVPVGARIHARHFVPGQNVDVSGISKG 135 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF GAMKRHNFGG+ A+HGVS SHR+ GSTG QDPG+VFK KKMAGRMG RVTV+NL Sbjct: 136 KGFQGAMKRHNFGGMPASHGVSKSHRALGSTGQCQDPGKVFKGKKMAGRMGTERVTVQNL 195 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VV VD R L+ ++G VPG K +++ +RD+ K Sbjct: 196 RVVKVDRGRNLLFLEGAVPG-NKGAFVEIRDAVKK 229 >gi|212528688|ref|XP_002144501.1| 50S ribosomal protein L3 [Penicillium marneffei ATCC 18224] gi|210073899|gb|EEA27986.1| 50S ribosomal protein L3 [Penicillium marneffei ATCC 18224] Length = 300 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 103/215 (47%), Positives = 141/215 (65%), Gaps = 3/215 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G++A K GMT +Y+ G+R P TVL LD CQVV H+T+DK+GY AVQVGAG K + Sbjct: 72 LRTGLLAIKKGMTGLYDPETGKRTPCTVLQLDRCQVVSHKTMDKHGYFAVQVGAGFKKPQ 131 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++K + G FS ++PK+ + EFRV+ LL +GS S ++F VGQ VD T GKG Sbjct: 132 RLTKALLGHFSVNEIAPKRYVHEFRVKDQSGLLEIGSTLSANWFQVGQFVDARSNTKGKG 191 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKRH F G +HGVS++HRS GS G Q G RV+ KKMAG MG + T++NL+ Sbjct: 192 FAGVMKRHGFHGQDRSHGVSLTHRSMGSAGPSQGGGSRVYPGKKMAGNMGNVQNTLQNLK 251 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V+ VD G+I+V G V G K + ++D+ K Sbjct: 252 VLEVDPVNGIIVVNGSVSGP-KGCLVQLQDALKKP 285 >gi|223042682|ref|ZP_03612731.1| 50S ribosomal protein L3 [Staphylococcus capitis SK14] gi|222444345|gb|EEE50441.1| 50S ribosomal protein L3 [Staphylococcus capitis SK14] Length = 220 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 93/221 (42%), Positives = 120/221 (54%), Gaps = 11/221 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60 Query: 54 -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 G K +KP G + +PK+ + EFR D+ VG S F G ++DVT Sbjct: 61 KGSKSNKYANKPAEGHAKKADTTPKRFIREFRNVNVDE-YEVGQEVSVDTFETGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH HG HR+ GS G D RVFK +KM GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMGHGSH-FHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 TV+NLEVV VD +ILVKG VPG KK + + S K Sbjct: 179 TVQNLEVVQVDTDNSVILVKGNVPGPKKG-LVEITTSIKKG 218 >gi|167755912|ref|ZP_02428039.1| hypothetical protein CLORAM_01432 [Clostridium ramosum DSM 1402] gi|167703904|gb|EDS18483.1| hypothetical protein CLORAM_01432 [Clostridium ramosum DSM 1402] Length = 242 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 83/211 (39%), Positives = 120/211 (56%), Gaps = 4/211 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+ +G IPVTV+ D V+ +T+ +GY A+QVG + + K + Sbjct: 2 KGILGRKIGMTQVFTTDGLLIPVTVVEADANVVLQKKTVATDGYDAIQVGFEDKREKLAN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G N +PK+ + EFR + VG + F G++VDVTG + GKG+ G Sbjct: 62 KAELGIVKKANTAPKRFIKEFRYDEMMS-YEVGDKITVDSFVAGEVVDVTGTSKGKGYQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH HG S +HR GS G P R+ KK+ G+MG TV+NLEVV+V Sbjct: 121 VIKRHGQRIGPKGHG-SGAHRIVGSMGPIA-PNRIAPGKKLPGQMGHVTRTVQNLEVVAV 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + L+L+KG VPG KK ++V+ K+A Sbjct: 179 DVENNLLLIKGSVPGPKKG-LVIVKSGIKAA 208 >gi|307154842|ref|YP_003890226.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 7822] gi|306985070|gb|ADN16951.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 7822] Length = 212 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 90/212 (42%), Positives = 124/212 (58%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT +++ E G IPVTV+H C + +T + +GY ++Q+G GE K K Sbjct: 1 MSVGIIGTKLGMTQIFDKETGIAIPVTVIHAGPCPITQIKTPETDGYSSIQIGYGEVKEK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP+ G P K L E+R+ + +G F G +VDV G TIG+G Sbjct: 61 ALNKPLLGHLKKSESIPLKNLKEYRLDNP-EQYQLGDALKVDIFQPGDIVDVAGKTIGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G KRHNF THG S +HR GSTG PGRV+ K+MAGR GG +VT++ L V Sbjct: 120 FAGYQKRHNFKRGSMTHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGRYGGTQVTIRKLTV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V VD +R LIL+KG VPG N + + + K Sbjct: 179 VQVDPERNLILIKGAVPGKPGN-LLSITPAKK 209 >gi|314934297|ref|ZP_07841656.1| 50S ribosomal protein L3 [Staphylococcus caprae C87] gi|313652227|gb|EFS15990.1| 50S ribosomal protein L3 [Staphylococcus caprae C87] Length = 220 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 93/221 (42%), Positives = 120/221 (54%), Gaps = 11/221 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60 Query: 54 -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 G K +KP G + +PK+ + EFR D+ VG S F G ++DVT Sbjct: 61 KGSKSNKYANKPAEGHAKKADTAPKRFIREFRNVNVDE-YEVGQEVSVDTFETGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH HG HR+ GS G D RVFK +KM GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMGHGSH-FHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 TV+NLEVV VD +ILVKG VPG KK + + S K Sbjct: 179 TVQNLEVVQVDTDNSVILVKGNVPGPKKG-LVEITTSIKKG 218 >gi|78186070|ref|YP_374113.1| 50S ribosomal protein L3 [Chlorobium luteolum DSM 273] gi|109893534|sp|Q3B6G1|RL3_PELLD RecName: Full=50S ribosomal protein L3 gi|78165972|gb|ABB23070.1| LSU ribosomal protein L3P [Chlorobium luteolum DSM 273] Length = 209 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 88/207 (42%), Positives = 123/207 (59%), Gaps = 1/207 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT +YN + +P T++ C V + +K+GY AVQ+G GE K V+KP Sbjct: 4 ILGKKIGMTRLYNDKREAVPCTIIQAGPCFVTQVKNAEKDGYDAVQIGIGERKEHKVTKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M G + V+P + EF D L GS S F G++V+V G++ GKGF+G + Sbjct: 64 MLGHYKKAGVTPGYMMAEFDASMFDVELAAGSPVSVESFKEGEIVNVLGVSKGKGFAGVV 123 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHNFGG THG S R+ GS G DP R FK +M GRMG + VTV+NL+VV + Sbjct: 124 KRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFKGTRMGGRMGSDNVTVRNLQVVKIMA 183 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211 + LI+VKG VPG KNS++ + K Sbjct: 184 ESNLIMVKGSVPGP-KNSYVKIVSIKK 209 >gi|258406185|ref|YP_003198927.1| 50S ribosomal protein L3 [Desulfohalobium retbaense DSM 5692] gi|257798412|gb|ACV69349.1| 50S ribosomal protein L3 [Desulfohalobium retbaense DSM 5692] Length = 209 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 88/203 (43%), Positives = 122/203 (60%), Gaps = 2/203 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +KLGMT V+ +G IPVTV+ C V+ +T + +GY A+Q+GA V+KP Sbjct: 6 LIGKKLGMTRVFGEDGTVIPVTVIQAGPCPVIQVKTAETDGYTALQIGADPLPAHRVTKP 65 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +G + +KL E RV+ + P G S FT+G+ +DVTG + G+GF+GAM Sbjct: 66 QQGHQAKAGKGCFRKLQEVRVEDAAEYEP-GQELSVDMFTIGERIDVTGKSKGRGFAGAM 124 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR NFGG +THG HRS G+ G P R+FK KKM G MG RV+V+N EVV + Sbjct: 125 KRWNFGGSPSTHGHEKVHRSTGAVGQCAAPSRIFKGKKMPGHMGAQRVSVRNAEVVDIRP 184 Query: 185 KRGLILVKGCVPGAKKNSWILVR 207 + LIL++G VPG KN I +R Sbjct: 185 EDNLILLRGQVPGP-KNGVITLR 206 >gi|269955435|ref|YP_003325224.1| 50S ribosomal protein L3 [Xylanimonas cellulosilytica DSM 15894] gi|269304116|gb|ACZ29666.1| ribosomal protein L3 [Xylanimonas cellulosilytica DSM 15894] Length = 217 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 89/211 (42%), Positives = 129/211 (61%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 + V+ +KLGMT +++ GR +PVTV+ +D V RT + +GY AVQ+ G+ + V+ Sbjct: 9 TAVLGKKLGMTQLWDEAGRLVPVTVVAVDTNVVTQVRTTETDGYSAVQLAVGQIDPRKVT 68 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 +P++G F V+P++ + E R D VG + + F G +VDV+G T GKG +G Sbjct: 69 QPLKGHFEKAGVTPRRHVAEIR-TADASTYTVGQEITAAAFEAGAVVDVSGTTKGKGTAG 127 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G P RVFK +MAGRMG R T +NL V +V Sbjct: 128 VMKRHGFAGVGASHGSHRNHRKPGSIGGASTPSRVFKGLRMAGRMGNARQTTQNLTVHAV 187 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+LVKG VPG K ++V+ + K A Sbjct: 188 DAEKGLLLVKGAVPGP-KGGVVVVKTAAKGA 217 >gi|289548391|ref|YP_003473379.1| 50S ribosomal protein L3 [Thermocrinis albus DSM 14484] gi|289182008|gb|ADC89252.1| 50S ribosomal protein L3 [Thermocrinis albus DSM 14484] Length = 234 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 91/211 (43%), Positives = 125/211 (59%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT V+ +G +PVTV+ ++ VV R +K+GY AVQVGA AK KN Sbjct: 1 MPIGLIGTKVGMTRVFLKDGTAVPVTVIKIEPNYVVAVRRQEKDGYNAVQVGAFPAKEKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119 ++KP G + P ++L EFRV D D VG F G+LVDV G++ G+G Sbjct: 61 LTKPELGHLKKAGLPPLRRLKEFRVD-DPDQYQVGQELRVEQIFQPGELVDVVGISKGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+GAMKR +FGG +HG HR+ GS G R DPGRV+K K+MAG G + V+ L V Sbjct: 120 FAGAMKRWDFGGFPKSHG-HRYHRAVGSIGQRTDPGRVWKGKRMAGHWGAETIRVQALLV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V V + L+LVKG VPG + + + + Sbjct: 179 VDVVPEENLLLVKGSVPGHNRGIVFVEKSTI 209 >gi|164663113|ref|XP_001732678.1| hypothetical protein MGL_0453 [Malassezia globosa CBS 7966] gi|159106581|gb|EDP45464.1| hypothetical protein MGL_0453 [Malassezia globosa CBS 7966] Length = 336 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 102/220 (46%), Positives = 143/220 (65%), Gaps = 7/220 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHR-----TLDKNGYMAVQVGAGE 55 +R G++ RK GMT ++ +G R+P TVL++D+ QV +H + D+ YMA+QV A + Sbjct: 64 LRVGLITRKKGMTTMFMPDGTRVPATVLYVDSNQVSMHVQRDAPSQDEAPYMALQVAASD 123 Query: 56 AKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMT 115 A+ VS P+RG S + PK+ + EFRV D +LP+G+ S ++F GQ VDV +T Sbjct: 124 ARESAVSAPVRGHLSRAGLGPKRVIKEFRVTPD-AMLPIGTQLSAAHFVPGQDVDVRAIT 182 Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175 GKGF+G MKRHNF G A+HG S++HR+ GS G QDPGRV+ K+M GRMGG+ TV+ Sbjct: 183 RGKGFAGVMKRHNFAGGNASHGASLAHRTPGSVGNNQDPGRVWPGKRMPGRMGGHYRTVQ 242 Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 N+ V+ +D K LI VKG VPG + V+D+ KS V Sbjct: 243 NVRVLRIDVKNELIFVKGQVPGPD-GGVVFVQDALKSMVK 281 >gi|302849682|ref|XP_002956370.1| mitochondrial ribosomal protein L3 [Volvox carteri f. nagariensis] gi|300258276|gb|EFJ42514.1| mitochondrial ribosomal protein L3 [Volvox carteri f. nagariensis] Length = 428 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 96/209 (45%), Positives = 132/209 (63%), Gaps = 2/209 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R G +A K GMT ++ G R+P+TVL +D CQVV +T + +G A+ +GAG + K Sbjct: 151 LRVGCIATKAGMTQEWDEHGVRVPLTVLWIDECQVVGVKTHEVHGRTALMLGAGHKRQKC 210 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +S GFF V + KK + E+ V +D LLP+G+ + ++F GQ VDVTG T KGF Sbjct: 211 MSPSQAGFFLKVGLPFKKLVAEWPVSED-ALLPMGTHITAAHFVAGQRVDVTGWTKYKGF 269 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G MKR F G A+HGVS+SHR+ G+ G RQDPG+V+K KK+ G MG R TV + V Sbjct: 270 QGVMKRWGFKGQPASHGVSLSHRAPGAIGNRQDPGKVWKGKKLPGCMGDERRTVHHCLVY 329 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VD R L+ ++G VPG K S + +RDS Sbjct: 330 KVDAARNLVYIRGQVPGPKGRS-VYLRDS 357 >gi|33866599|ref|NP_898158.1| 50S ribosomal protein L3 [Synechococcus sp. WH 8102] gi|42559596|sp|Q7U4K0|RL3_SYNPX RecName: Full=50S ribosomal protein L3 gi|33633377|emb|CAE08582.1| 50S ribosomal protein L3 [Synechococcus sp. WH 8102] Length = 218 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 83/219 (37%), Positives = 129/219 (58%), Gaps = 4/219 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ +GR +PVT++ C++ ++ D +GY AVQ+G G+ + K Sbjct: 1 MSIGILGKKLGMSQFFDEQGRAVPVTLIEAGPCRITQLKSSDTDGYAAVQIGFGDTREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + + + L E+RV D +G + F GQ VDV+G TIG+GF Sbjct: 61 INKPAKGHLNKTGETLLRHLREYRVDGLDG-FELGGSITVGDFEAGQKVDVSGDTIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRH F THG S +HR GS G PGR++ K+MAGR GG ++T + L ++ Sbjct: 120 SGYQKRHGFSRGPMTHG-SKNHREPGSIGPGTTPGRIYPGKRMAGRYGGKKITTRGLTIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK-SAVNCKG 218 VD +R L++VKG VPG + + +R + + A KG Sbjct: 179 KVDSERNLLVVKGSVPGKP-GALLNIRPALRVGAKPAKG 216 >gi|27468742|ref|NP_765379.1| 50S ribosomal protein L3 [Staphylococcus epidermidis ATCC 12228] gi|42559629|sp|Q8CRG0|RL3_STAES RecName: Full=50S ribosomal protein L3 gi|27316290|gb|AAO05465.1|AE016750_70 50S ribosomal protein L3 [Staphylococcus epidermidis ATCC 12228] Length = 220 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 92/221 (41%), Positives = 122/221 (55%), Gaps = 11/221 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60 Query: 54 -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 G K +KP G + +PK+ + EFR D+ +G S F G ++DVT Sbjct: 61 KGSKSNKYANKPAEGHAKKADTAPKRFIREFRNVNVDE-YELGQEVSVDTFETGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH G HG HR+ GS G D +VFK +KM GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQGRGPMAHGSH-FHRAPGSVGMASDASKVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 TV+NLEVV VD + +ILVKG VPG KK + + S K Sbjct: 179 TVQNLEVVQVDTENSVILVKGNVPGPKKG-LVEITTSIKKG 218 >gi|189465418|ref|ZP_03014203.1| hypothetical protein BACINT_01771 [Bacteroides intestinalis DSM 17393] gi|189437692|gb|EDV06677.1| hypothetical protein BACINT_01771 [Bacteroides intestinalis DSM 17393] Length = 205 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 83/204 (40%), Positives = 124/204 (60%), Gaps = 4/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EG+ +P TV+ C V ++++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKSVEKDGYAAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PKK L EF+ + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKKHLAEFK--EFETELNLGDTVTVELFNDATFVDVIGTSKGKGFQGV 120 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 L+L+KG VPG K S +++ Sbjct: 181 LPDHNLLLIKGSVPGC-KGSIVII 203 >gi|298491398|ref|YP_003721575.1| 50S ribosomal protein L3 ['Nostoc azollae' 0708] gi|298233316|gb|ADI64452.1| 50S ribosomal protein L3 ['Nostoc azollae' 0708] Length = 211 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 123/211 (58%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT +++ G IPVTV+ C V +T +GY A+QVG G K K Sbjct: 1 MSVGILGTKLGMTQIFDEAGVAIPVTVIQAGPCTVTQVKTKQTDGYCAIQVGYGVVKPKV 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P+ G + + + L E+R D +G F+ GQ+VDV G +IG+GF Sbjct: 61 LNRPLLGHLAKSSAPALRHLNEYRTDASGD-YALGQELKADIFSAGQIVDVIGTSIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KR++FG +HG S +HR+ GS G PGRV+ K+MAGR+GG RVT++ L +V Sbjct: 120 AGNQKRNHFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGTRVTIRKLTIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D R LIL+KG +PG + + + + K Sbjct: 179 RLDADRNLILIKGAIPGKP-GALVNIVPTNK 208 >gi|304413145|ref|ZP_07394618.1| 50S ribosomal subunit protein L3 [Candidatus Regiella insecticola LSR1] gi|304283988|gb|EFL92381.1| 50S ribosomal subunit protein L3 [Candidatus Regiella insecticola LSR1] Length = 258 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 97/235 (41%), Positives = 133/235 (56%), Gaps = 26/235 (11%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 + G++ +KLGMT V+ EG IPVTV+ ++ +V + + +GY AVQV G+ K + Sbjct: 26 KMGLIGKKLGMTRVFTEEGVSIPVTVIEIEKNRVTQVKDIKTDGYCAVQVTTGQKKTSRL 85 Query: 62 SKPMRGFFS------------------------SVNVSPKKKLFEFRVQKDDDLLPVGSV 97 KP RG F V+ + L+EFR+ +D L G Sbjct: 86 KKPQRGHFEGTKTIRSKRATLDNPEIIKEVLTSKDPVTAGRGLWEFRIAEDQKFLR-GEE 144 Query: 98 FSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRV 157 + F + VDVTG + GKGF+G +KR NF ATHG S+SHR+ GS G Q PG+V Sbjct: 145 ITVEIFADVKKVDVTGTSKGKGFAGVVKRWNFRTQDATHGNSLSHRAPGSIGQNQTPGKV 204 Query: 158 FKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 FK KKMAG +G RVTV++L+VV VD KR L+LVKG VPGA + I V+ + K+ Sbjct: 205 FKGKKMAGHLGDERVTVQSLDVVRVDAKRNLLLVKGAVPGATGGNLI-VKPAVKA 258 >gi|317153958|ref|YP_004122006.1| 50S ribosomal protein L3 [Desulfovibrio aespoeensis Aspo-2] gi|316944209|gb|ADU63260.1| 50S ribosomal protein L3 [Desulfovibrio aespoeensis Aspo-2] Length = 210 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 83/204 (40%), Positives = 121/204 (59%), Gaps = 2/204 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT ++ +G VTV+ C V+ +T DK GY A+Q+G + V+K Sbjct: 6 GILGKKLGMTRIFKEDGSVCCVTVIEAGPCPVMQIKTQDKEGYNALQLGYDTIAERKVNK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G + + L EF + + D +G + F+ G+ V VTG + GKGF G Sbjct: 66 PLKGHMAKAGKDMYRHLREFPL-EGVDGYELGQEITVDIFSAGEKVKVTGTSKGKGFQGV 124 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF G RA+HG HR GS G PGRV+KNKKM G+MG RVT+ N+E+V V Sbjct: 125 MKRHNFSGSRASHGAEKVHRVPGSVGNATYPGRVWKNKKMPGQMGNARVTLSNVEIVDVR 184 Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207 + +++VKG VPG N ++++R Sbjct: 185 PEDNVLVVKGQVPGPN-NGFVMIR 207 >gi|295111422|emb|CBL28172.1| LSU ribosomal protein L3P [Synergistetes bacterium SGP1] Length = 207 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 92/201 (45%), Positives = 130/201 (64%), Gaps = 1/201 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT +++ EG+ + VTV+ C VV RT ++NGY AV +G G K Sbjct: 1 MGIGILGKKMGMTQIFDAEGQAVAVTVIAAGPCPVVAVRTPEQNGYSAVLLGFGAVKPHK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SKP++G F V PK+ L EFR+ K + VG F G+ +DV+G++ GKGF Sbjct: 61 LSKPVKGLFDKNKVEPKRTLREFRLDK-AEGYEVGQEIRVDLFEAGERIDVSGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR++FGG + +HG S+ HR GS+G PGRVF K+M G MG ++VTVKNL V+ Sbjct: 120 AGVMKRYHFGGQQFSHGTSVEHRHGGSSGAISYPGRVFPGKRMPGHMGSDKVTVKNLTVM 179 Query: 181 SVDDKRGLILVKGCVPGAKKN 201 +VD + L+LVKG VPGAK Sbjct: 180 AVDLENNLLLVKGAVPGAKDG 200 >gi|42559703|sp|Q9PE76|RL3_XYLFA RecName: Full=50S ribosomal protein L3 Length = 215 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 100/211 (47%), Positives = 129/211 (61%), Gaps = 2/211 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 G V RK GM+ V+ +G IPVT++ +VV +T D +GY AVQV G + V Sbjct: 5 SMGFVGRKAGMSRVFLEDGCSIPVTLIEATANRVVQIKTSDVDGYDAVQVTVGSRRSVLV 64 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G F+ V + L+EFRV+K VGS S F VGQ VD+ G+T GKGF Sbjct: 65 NKPESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGF 124 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRHNF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG R +V+NLEVV Sbjct: 125 QGTIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEVV 184 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D +R LI V+G +PGA +L+R + K Sbjct: 185 KIDVERCLIAVRGAIPGASGGD-VLIRSASK 214 >gi|160872579|ref|ZP_02062711.1| ribosomal protein L3 [Rickettsiella grylli] gi|159121378|gb|EDP46716.1| ribosomal protein L3 [Rickettsiella grylli] Length = 223 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 86/217 (39%), Positives = 130/217 (59%), Gaps = 6/217 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK GMT +Y G IPVT++ + +VV +T +++GY ++QV G+ Sbjct: 1 MTMGLIGRKCGMTQLYAENGTVIPVTLIEIQPNRVVQIKTKERDGYESIQVTTGKKLSSR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLL----PVGSVFSPS-YFTVGQLVDVTGMT 115 ++K G F+ V P L+E R+ ++D +G + F +G VDVTG Sbjct: 61 LNKAEAGHFAKAAVEPGINLWELRITEEDHEFLKGISLGMEMTIDKLFKLGTYVDVTGTN 120 Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175 GKGF+G +KR++F ATHG S+SHR+ GS G RQ PGRVFK KKM G++G R TV+ Sbjct: 121 KGKGFAGVVKRYHFSTQDATHGNSLSHRAPGSIGQRQSPGRVFKGKKMCGQLGNRRCTVQ 180 Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +LE+V +D +R L+ +KG VPGA ++V+ + + Sbjct: 181 SLEIVRIDTERHLLHIKGAVPGAPGGQ-VIVKQAVRK 216 >gi|251812047|ref|ZP_04826520.1| 50S ribosomal protein L3 [Staphylococcus epidermidis BCM-HMP0060] gi|282875342|ref|ZP_06284215.1| 50S ribosomal protein L3 [Staphylococcus epidermidis SK135] gi|293368433|ref|ZP_06615057.1| 50S ribosomal protein L3 [Staphylococcus epidermidis M23864:W2(grey)] gi|251804381|gb|EES57038.1| 50S ribosomal protein L3 [Staphylococcus epidermidis BCM-HMP0060] gi|281296107|gb|EFA88628.1| 50S ribosomal protein L3 [Staphylococcus epidermidis SK135] gi|291317391|gb|EFE57813.1| 50S ribosomal protein L3 [Staphylococcus epidermidis M23864:W2(grey)] gi|329731174|gb|EGG67544.1| 50S ribosomal protein L3 [Staphylococcus epidermidis VCU144] gi|329736435|gb|EGG72703.1| 50S ribosomal protein L3 [Staphylococcus epidermidis VCU028] gi|329736982|gb|EGG73237.1| 50S ribosomal protein L3 [Staphylococcus epidermidis VCU045] Length = 220 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 93/221 (42%), Positives = 122/221 (55%), Gaps = 11/221 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60 Query: 54 -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 G K +KP G + +PK+ + EFR D+ VG S F G ++DVT Sbjct: 61 KGSKSNKYANKPAEGHAKKADTAPKRFIREFRNVNVDE-YEVGQEVSVDTFETGDIIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH G HG HR+ GS G D +VFK +KM GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQGRGPMAHGSH-FHRAPGSVGMASDASKVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 TV+NLEVV VD + +ILVKG VPG KK + + S K Sbjct: 179 TVQNLEVVQVDTENSVILVKGNVPGPKKG-LVEITTSIKKG 218 >gi|326799127|ref|YP_004316946.1| 50S ribosomal protein L3 [Sphingobacterium sp. 21] gi|326549891|gb|ADZ78276.1| 50S ribosomal protein L3 [Sphingobacterium sp. 21] Length = 205 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 87/205 (42%), Positives = 126/205 (61%), Gaps = 4/205 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ EG+ IP TV+ C V RT++ +GY A+Q+ E K KN + Sbjct: 2 SGIIGKKVGMTSIFDAEGKNIPCTVIEAGPCVVTQIRTVENDGYTAIQLAFDEKKEKNTT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 ++G F+ N +PK+KL EF V + +G V + F G +DV G + GKGF G Sbjct: 62 ASLKGHFAKANTTPKRKLVEFEVFP--EEKNLGDVVTVDIFAEGDYIDVVGTSKGKGFQG 119 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG THG R+ GS G P RVFK +MAGR GG+RV V+NL+V+ Sbjct: 120 VVKRHGFGGVGGQTHGQHNRMRAPGSLGASSWPSRVFKGMRMAGRTGGDRVKVQNLQVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 V ++ L++V G VPGA K S+++V Sbjct: 180 VYPEKNLLVVSGSVPGA-KGSYVIV 203 >gi|226293678|gb|EEH49098.1| 54S ribosomal protein L9 [Paracoccidioides brasiliensis Pb18] Length = 295 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 97/215 (45%), Positives = 138/215 (64%), Gaps = 3/215 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+GV+A K GMT +++ G+R P T+L LD QV+ H+TL K+GY AVQVG G + Sbjct: 72 LRTGVLAIKKGMTAIFDQETGKRTPCTILQLDQVQVISHKTLKKHGYFAVQVGCGWKHER 131 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V++PM G F++ V+PK+ + EFRV+ + LLP+G V + +F GQ VD + G G Sbjct: 132 AVTRPMLGHFAANGVAPKRHIHEFRVKDESGLLPIGEVINADWFQEGQFVDARSNSRGMG 191 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F G MKRH F G +HGVS++HRS GS G Q G RV KKMAG MG +VT++NL Sbjct: 192 FEGVMKRHGFHGQDRSHGVSLAHRSLGSAGPSQGGGSRVHPGKKMAGNMGNEQVTLQNLR 251 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V+ VD ++G+++V G V G K + ++D+ K Sbjct: 252 VLKVDAEKGIVVVNGSVSGP-KGCIVKLQDAIKKP 285 >gi|299830377|ref|YP_003734592.1| ribosomal protein L3 [Kryptoperidinium foliaceum] gi|297385079|gb|ADI40377.1| ribosomal protein L3 [Kryptoperidinium foliaceum] Length = 208 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 83/206 (40%), Positives = 120/206 (58%), Gaps = 2/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT +++ G IPVT+L + C + +T K+GY A+QVG K+ Sbjct: 1 MSVGLLGNKIGMTQIFDETGNIIPVTILKVGPCTITQVKTEAKDGYNAIQVGYSNVSNKS 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G N+ P K L EFRV D + VG + F+ GQ V++ G TIGKGF Sbjct: 61 LTQPELGHLQKSNIQPLKYLKEFRVNSDHE-FEVGQSLTLDLFSSGQFVNIQGKTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRHNF THG S +HR+ GS G PGRV KKMAG++G TVK L+VV Sbjct: 120 AGLQKRHNFTRGPMTHG-SKNHRAPGSIGMGTTPGRVLPGKKMAGQLGNKITTVKKLKVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 ++ + ++++KG VPG N ++ Sbjct: 179 QLNLEENILVIKGSVPGKPGNLLTII 204 >gi|194334861|ref|YP_002016721.1| 50S ribosomal protein L3 [Prosthecochloris aestuarii DSM 271] gi|226730548|sp|B4S5M7|RL3_PROA2 RecName: Full=50S ribosomal protein L3 gi|194312679|gb|ACF47074.1| ribosomal protein L3 [Prosthecochloris aestuarii DSM 271] Length = 209 Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 86/202 (42%), Positives = 119/202 (58%), Gaps = 1/202 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT +YN + +P TV+ C V +T D +GY A Q+ GE K VSKP Sbjct: 4 ILGKKIGMTRIYNEKREAVPCTVIQAAPCFVSQVKTSDNDGYEAYQLSIGERKEAKVSKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 MRG ++ ++P K+ EF D L +GS S F G VDV G+T GKGF+G + Sbjct: 64 MRGHYAKAGITPGYKIAEFGKDLMDADLELGSSVSVDMFKEGDKVDVRGVTKGKGFAGVV 123 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHNF G THG S R+ GS G DP R FK +MAGRMG V V+ L++V + Sbjct: 124 KRHNFAGGSRTHGQSDRLRAPGSVGGSSDPSRTFKGMRMAGRMGSKNVKVRGLQIVKIIP 183 Query: 185 KRGLILVKGCVPGAKKNSWILV 206 + L+++KG VPG KNS++ + Sbjct: 184 ESNLLVIKGSVPGV-KNSYVEI 204 >gi|294790411|ref|ZP_06755569.1| 50S ribosomal protein L3 [Scardovia inopinata F0304] gi|294458308|gb|EFG26661.1| 50S ribosomal protein L3 [Scardovia inopinata F0304] Length = 216 Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 84/211 (39%), Positives = 118/211 (55%), Gaps = 2/211 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R +V +KLGM+ V++ G +PVT++ + + +T + +GY AVQ+G G V Sbjct: 7 RKALVGKKLGMSQVWDDNGFFVPVTLVDVSTNIITAVKTDETDGYKAVQLGYGAIDPTKV 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+ G F+ V+P++ L E R + D P G F GQ VDVTG T GKGF+ Sbjct: 67 TKPLAGHFAKAGVTPRRHLVEVRTEDADSFEP-GQELPVDTFADGQRVDVTGTTKGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F R THG + R GS G P R+ K K+MAGRMG N T + L VVS Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGNNTHTTQGLTVVS 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + G++ +KG VPG K + +LVR + K Sbjct: 186 SNVDSGILAIKGAVPGP-KGAIVLVRSAVKG 215 >gi|126657988|ref|ZP_01729140.1| 50S ribosomal protein L3 [Cyanothece sp. CCY0110] gi|126620626|gb|EAZ91343.1| 50S ribosomal protein L3 [Cyanothece sp. CCY0110] Length = 212 Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 84/211 (39%), Positives = 119/211 (56%), Gaps = 4/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT ++ E G IPVTV+ C + +T + +GY A+Q+G E + K Sbjct: 1 MAVGLLGTKLGMTQIFEEESGLAIPVTVVQAGPCTITQIKTAETDGYTAIQIGYLEVREK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 N++KP G SP + L E+RV +D +G F G LVD+ G ++G+G Sbjct: 61 NLTKPELGHLKKAEASPLRHLKEYRV-EDTASYTLGEAVKADIFNAGDLVDIAGTSMGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G KRHNF THG S +HR GSTG PGRV+ KKMAG+ G T ++LEV Sbjct: 120 FAGYQKRHNFKRGSMTHG-SKNHRLPGSTGAGTTPGRVYPGKKMAGQYGAVTTTTRHLEV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V VD +R L+L++G VPG + + + Sbjct: 179 VKVDAERNLLLIRGAVPGKP-GGLLNITPAK 208 >gi|149371629|ref|ZP_01891045.1| 50S ribosomal protein L3 [unidentified eubacterium SCB49] gi|149355256|gb|EDM43816.1| 50S ribosomal protein L3 [unidentified eubacterium SCB49] Length = 203 Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 81/206 (39%), Positives = 121/206 (58%), Gaps = 6/206 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ RK+GMT +++ G+ +P TV+ C V RT + +GY A+Q+G + K V+ Sbjct: 2 SGLIGRKIGMTSIFDENGKNLPCTVIECGPCVVTQVRTEEVDGYAALQLGFDDKKA--VN 59 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G K+K+ EF+ D+ +G + +F G VDV G + GKGF G Sbjct: 60 KAAEGHAKKAGTVAKRKVVEFKGF--DEEYKLGDTITVEHFAEGDFVDVAGTSKGKGFQG 117 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG +ATHG R+ GS G P RVFK +MAG+MG +V V+NL V+ Sbjct: 118 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGQMGNEKVKVQNLRVLK 177 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L++VKGCVPG KN+++ ++ Sbjct: 178 VVAEKNLLVVKGCVPG-HKNAYVTIQ 202 >gi|90962406|ref|YP_536322.1| 50S ribosomal protein L3 [Lactobacillus salivarius UCC118] gi|227891544|ref|ZP_04009349.1| 50S ribosomal protein L3 [Lactobacillus salivarius ATCC 11741] gi|123269876|sp|Q1WS90|RL3_LACS1 RecName: Full=50S ribosomal protein L3 gi|90821600|gb|ABE00239.1| LSU ribosomal protein L3P [Lactobacillus salivarius UCC118] gi|227866691|gb|EEJ74112.1| 50S ribosomal protein L3 [Lactobacillus salivarius ATCC 11741] gi|300215031|gb|ADJ79447.1| 50S ribosomal protein L3 [Lactobacillus salivarius CECT 5713] Length = 207 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 79/210 (37%), Positives = 120/210 (57%), Gaps = 5/210 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 G++ +K+GMT V+ G +PVTV+ +D+ V+ +T++ +GY A+Q+G + + Sbjct: 3 TKGILGKKVGMTQVFTENGELVPVTVVKVDSNVVLQVKTMENDGYEAIQLGFDDLREVLT 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP +G + N +PK+ + E R + VG F G VDVTG + G GF Sbjct: 63 NKPAKGHAAKANTTPKRFVREIR-DVELGEYKVGDEVKADIFEAGDFVDVTGTSKGHGFQ 121 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G++KR+ HG S HR GS G RV K K + GRMGGNRVT++NLE+V Sbjct: 122 GSIKRNGQHRGPMAHG-SRYHRRPGSMGVI--INRVMKGKLLPGRMGGNRVTIQNLEIVK 178 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D + G++L+KG VPGA K S + ++ + K Sbjct: 179 ADTENGVLLIKGNVPGANK-SLVTIKSTVK 207 >gi|319944795|ref|ZP_08019059.1| 50S ribosomal protein L3 [Lautropia mirabilis ATCC 51599] gi|319742044|gb|EFV94467.1| 50S ribosomal protein L3 [Lautropia mirabilis ATCC 51599] Length = 217 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 82/206 (39%), Positives = 120/206 (58%), Gaps = 2/206 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 M ++ +G IPVTV+ + +V ++++K+GY AVQ+ GE + V+ G ++ Sbjct: 1 MMRIFTDDGESIPVTVIDVSGNRVSQVKSVEKDGYSAVQLVYGERRASRVNAAEAGHYAK 60 Query: 72 VNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130 V EF V + +P G+V +F VGQ +DV G + GKGF+G +KRHNFG Sbjct: 61 AGVQAGTVAAEFHVSPERAAEVPAGTVLGADHFVVGQYIDVQGTSQGKGFAGTIKRHNFG 120 Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190 RA+HG S SHR GS G QDPGRVF ++M+G+MG TV+NL V +D +RGL+L Sbjct: 121 SQRASHGNSRSHRVPGSIGMAQDPGRVFPGQRMSGQMGNVTRTVQNLVVERIDTERGLLL 180 Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNC 216 V+G VPG+ + + S K + Sbjct: 181 VRGAVPGSAGGHLV-ITPSVKRRLKP 205 >gi|16329941|ref|NP_440669.1| 50S ribosomal protein L3 [Synechocystis sp. PCC 6803] gi|2500229|sp|P73320|RL3_SYNY3 RecName: Full=50S ribosomal protein L3 gi|1652427|dbj|BAA17349.1| 50S ribosomal protein L3 [Synechocystis sp. PCC 6803] Length = 213 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 86/211 (40%), Positives = 121/211 (57%), Gaps = 4/211 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT +++ G IPVTV+ C V +T D +GY A+QVG K K Sbjct: 1 MSIGILGTKLGMTQIFDQESGISIPVTVVQAGPCPVTQVKTQDTDGYNAIQVGFLPVKEK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +SKP G N P + L E+R+ +L P G + F G LVDV G ++G+G Sbjct: 61 ALSKPELGHLKKSNTDPMRHLKEYRLTDAPNLQP-GDAVTADIFQAGDLVDVAGQSMGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G KRHNF THG S +HR GSTG PGRV+ K+MAG+ G ++VTV+ L V Sbjct: 120 FAGYQKRHNFRRGNMTHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGQYGASQVTVRRLTV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V VD +R L+++KG +PG + + + + Sbjct: 179 VRVDAERNLLIIKGALPGKP-GTLLNITPAK 208 >gi|325288578|ref|YP_004264759.1| LSU ribosomal protein L3P [Syntrophobotulus glycolicus DSM 8271] gi|324963979|gb|ADY54758.1| LSU ribosomal protein L3P [Syntrophobotulus glycolicus DSM 8271] Length = 209 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 89/210 (42%), Positives = 127/210 (60%), Gaps = 3/210 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ +G+ IPVTV+ C V+ +T +GY A+QVG E + + Sbjct: 1 MSKGILGKKIGMTQIFLEDGKLIPVTVVEAGPCYVLQKKTQASDGYNAIQVGFSEIRERL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP G F V+V P + + EFR D + +G + F+ G +DV G + GKGF Sbjct: 61 VNKPKLGHFKKVDVKPSRFIREFRTD-DVESFEIGQTINADVFSTGDKIDVVGTSRGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH HG HR+ GS G + P RVFK +++ GR+GG RVTV+NLE+V Sbjct: 120 AGMHKRHGGRRGPMGHGSKYHHRT-GSMGAKG-PARVFKGRELPGRLGGERVTVQNLEIV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 VD + LIL+KGCVPGAKK+ IL + S Sbjct: 178 RVDADKNLILIKGCVPGAKKSLLILKKTSK 207 >gi|71902234|ref|ZP_00684241.1| Ribosomal protein L3 [Xylella fastidiosa Ann-1] gi|71728008|gb|EAO30222.1| Ribosomal protein L3 [Xylella fastidiosa Ann-1] Length = 215 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 100/211 (47%), Positives = 129/211 (61%), Gaps = 2/211 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 G V RK GM+ V+ +G IPVT++ +VV +T D +GY AVQV G + V Sbjct: 5 SMGFVGRKAGMSRVFLEDGCSIPVTLIEATANRVVQIKTSDVDGYDAVQVTVGSRRSVLV 64 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G F+ V + L+EFRV+K VGS S F VGQ VD+ G+T GKGF Sbjct: 65 NKPESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGF 124 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRHNF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG R +V+NLEV+ Sbjct: 125 QGTIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEVI 184 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D +R LI V+G VPGA +L+R + K Sbjct: 185 KIDVERCLIAVRGAVPGASGGD-VLIRSASK 214 >gi|146298161|ref|YP_001192752.1| 50S ribosomal protein L3 [Flavobacterium johnsoniae UW101] gi|189042844|sp|A5FMY1|RL3_FLAJO RecName: Full=50S ribosomal protein L3 gi|146152579|gb|ABQ03433.1| 50S ribosomal protein L3 [Flavobacterium johnsoniae UW101] Length = 205 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 84/206 (40%), Positives = 124/206 (60%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G + K+ + Sbjct: 2 SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTNEVDGYEALQLGFDDKNEKHST 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F KKK+ EF+ +G + S F G+ VDV G++ GKGF G Sbjct: 62 KAALGHFKKAGTVAKKKVVEFQ--DFATEQKLGDLIDVSIFEEGEFVDVQGVSKGKGFQG 119 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG +ATHG R+ GS G P RVFK +MAGRMGG+ V V+NL V+ Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGGDNVKVQNLRVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L++VKGC+PG KNS+++++ Sbjct: 180 VVAEKNLLVVKGCIPG-HKNSYVIIQ 204 >gi|229821623|ref|YP_002883149.1| ribosomal protein L3 [Beutenbergia cavernae DSM 12333] gi|229567536|gb|ACQ81387.1| ribosomal protein L3 [Beutenbergia cavernae DSM 12333] Length = 220 Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 84/211 (39%), Positives = 128/211 (60%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 + ++ KLGMT V++ GR +PVTV+ + V RT + +GY AVQ+ G+ + V+ Sbjct: 12 TALLGTKLGMTQVWDDAGRLVPVTVVQVGTNVVSAVRTPETDGYSAVQLAFGQIDPRKVT 71 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 +P++G F+ V+P++ + E R + P G + F GQ VDV G T GKG +G Sbjct: 72 QPLKGHFAKAGVTPRRHVAEIRTGDAAEYTP-GQELTVEVFAAGQGVDVVGTTKGKGTAG 130 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G+ A+HG +HR GS G P RVF+ +MAGRMG +R TV+NL++ +V Sbjct: 131 VMKRHGFSGVGASHGAHRNHRKAGSIGGASTPSRVFRGLRMAGRMGNDRHTVQNLKIHAV 190 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+LV G +PG + ++V+ + K A Sbjct: 191 DAEKGLLLVTGALPGP-RGGLVVVKTASKEA 220 >gi|88803750|ref|ZP_01119274.1| 50S ribosomal protein L3 [Polaribacter irgensii 23-P] gi|88780483|gb|EAR11664.1| 50S ribosomal protein L3 [Polaribacter irgensii 23-P] Length = 205 Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 82/206 (39%), Positives = 129/206 (62%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ RK+GMT +++ G+ IP TV+ C V RT++ +GY A+Q+G + K+ + Sbjct: 2 SGLIGRKIGMTSLFDENGKNIPCTVIEAGPCVVTQVRTIEVDGYSALQLGFDDKTAKSSN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K + G F KKK+ EF+ + ++ +G S ++F G+ VDV+G++ GKGF G Sbjct: 62 KALDGHFKKAGSVAKKKVVEFQGFE--EVYKLGDSISVAHFEEGEFVDVSGVSKGKGFQG 119 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH F G +ATHG R+ GS G P RVFK +MAGRMGG++V V+NL V+ Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGDKVKVQNLRVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L++VKG +PG KN+++ ++ Sbjct: 180 VVAEKNLLVVKGAIPG-HKNAFVTIQ 204 >gi|225678845|gb|EEH17129.1| 50S ribosomal protein L3 [Paracoccidioides brasiliensis Pb03] Length = 295 Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 97/215 (45%), Positives = 138/215 (64%), Gaps = 3/215 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+GV+A K GMT +++ G+R P T+L LD QV+ H+TL K+GY AVQVG G + Sbjct: 72 LRTGVLAIKKGMTAIFDQETGKRTPCTILQLDQVQVISHKTLKKHGYFAVQVGCGWKHER 131 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V++PM G F++ V+PK+ + EFRV+ + LLP+G V + +F GQ VD + G G Sbjct: 132 AVTRPMLGHFAANGVAPKRHIHEFRVKDESGLLPIGEVINADWFQEGQFVDARSNSRGMG 191 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F G MKRH F G +HGVS++HRS GS G Q G RV KKMAG MG +VT++NL Sbjct: 192 FEGVMKRHGFHGQDRSHGVSLAHRSLGSAGPSQGGGSRVHPGKKMAGNMGNEQVTLQNLR 251 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V+ VD ++G+++V G V G K + ++D+ K Sbjct: 252 VLKVDAEKGIVVVNGSVSGP-KGCIVKLQDAIKKP 285 >gi|225010517|ref|ZP_03700988.1| ribosomal protein L3 [Flavobacteria bacterium MS024-3C] gi|225005346|gb|EEG43297.1| ribosomal protein L3 [Flavobacteria bacterium MS024-3C] Length = 205 Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 85/205 (41%), Positives = 121/205 (59%), Gaps = 4/205 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ RK+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G + K+V+ Sbjct: 2 SGLIGRKIGMTSIFDENGKNIPCTVIETGPCTVTQVRTEEVDGYNALQLGFDDKAEKHVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F VS K+K+ EFR + D +G F G+ VD+ + GKGF G Sbjct: 62 KAAAGHFKKAGVSAKRKVVEFRDFEGD--YKLGDTIGVDLFVEGEFVDIAANSKGKGFQG 119 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH F G +ATHG R+ GS G P RVFK KMAGRMGG RV+ NL ++ Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGRMGGVRVSALNLRILK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 V ++ L++VKGCVPG KN+++ + Sbjct: 180 VVPEKNLLVVKGCVPG-HKNAYVTI 203 >gi|15925240|ref|NP_372774.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus Mu50] gi|15927830|ref|NP_375363.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus N315] gi|21283898|ref|NP_646986.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MW2] gi|49484466|ref|YP_041690.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MRSA252] gi|49487032|ref|YP_044253.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MSSA476] gi|82751839|ref|YP_417580.1| 50S ribosomal protein L3 [Staphylococcus aureus RF122] gi|87161988|ref|YP_494839.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88196162|ref|YP_500979.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150394755|ref|YP_001317430.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus JH1] gi|151222364|ref|YP_001333186.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus str. Newman] gi|156980565|ref|YP_001442824.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus Mu3] gi|161353538|ref|YP_187049.2| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus COL] gi|221140148|ref|ZP_03564641.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253317010|ref|ZP_04840223.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253729916|ref|ZP_04864081.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253734341|ref|ZP_04868506.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus TCH130] gi|255007030|ref|ZP_05145631.2| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257423735|ref|ZP_05600164.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus 55/2053] gi|257426413|ref|ZP_05602815.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus 65-1322] gi|257429052|ref|ZP_05605439.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus 68-397] gi|257431698|ref|ZP_05608061.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus E1410] gi|257434659|ref|ZP_05610710.1| LSU ribosomal protein L3 [Staphylococcus aureus subsp. aureus M876] gi|257794596|ref|ZP_05643575.1| 50S ribosomal protein L3 [Staphylococcus aureus A9781] gi|258408802|ref|ZP_05681086.1| 50S ribosomal protein L3 [Staphylococcus aureus A9763] gi|258422401|ref|ZP_05685313.1| LSU ribosomal protein L3 [Staphylococcus aureus A9719] gi|258422697|ref|ZP_05685602.1| LSU ribosomal protein L3 [Staphylococcus aureus A9635] gi|258439790|ref|ZP_05690536.1| 50S ribosomal protein L3 [Staphylococcus aureus A9299] gi|258442654|ref|ZP_05691214.1| 50S ribosomal protein L3 [Staphylococcus aureus A8115] gi|258446647|ref|ZP_05694802.1| 50S ribosomal protein L3 [Staphylococcus aureus A6300] gi|258450235|ref|ZP_05698327.1| 50S ribosomal protein L3 [Staphylococcus aureus A6224] gi|258450755|ref|ZP_05698814.1| 50S ribosomal protein L3 [Staphylococcus aureus A5948] gi|258455393|ref|ZP_05703353.1| ribosomal protein L3 [Staphylococcus aureus A5937] gi|262048514|ref|ZP_06021398.1| 50S ribosomal protein L3 [Staphylococcus aureus D30] gi|262052039|ref|ZP_06024250.1| 50S ribosomal protein L3 [Staphylococcus aureus 930918-3] gi|269203883|ref|YP_003283152.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ED98] gi|282893688|ref|ZP_06301920.1| 50S ribosomal protein L3 [Staphylococcus aureus A8117] gi|282902153|ref|ZP_06310046.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C160] gi|282906593|ref|ZP_06314441.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus Btn1260] gi|282909563|ref|ZP_06317374.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911810|ref|ZP_06319606.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus WBG10049] gi|282915099|ref|ZP_06322876.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus M899] gi|282917595|ref|ZP_06325347.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus D139] gi|282920825|ref|ZP_06328543.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C427] gi|282922119|ref|ZP_06329815.1| 50S ribosomal protein L3 [Staphylococcus aureus A9765] gi|282925730|ref|ZP_06333378.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C101] gi|282926796|ref|ZP_06334423.1| 50S ribosomal protein L3 [Staphylococcus aureus A10102] gi|283959028|ref|ZP_06376469.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus A017934/97] gi|284025276|ref|ZP_06379674.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus 132] gi|293497503|ref|ZP_06665357.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus 58-424] gi|293511078|ref|ZP_06669775.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus M809] gi|293549684|ref|ZP_06672356.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus M1015] gi|294848783|ref|ZP_06789528.1| 50S ribosomal protein L3 [Staphylococcus aureus A9754] gi|295404926|ref|ZP_06814739.1| 50S ribosomal protein L3 [Staphylococcus aureus A8819] gi|295428833|ref|ZP_06821457.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus EMRSA16] gi|296275959|ref|ZP_06858466.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MR1] gi|297209937|ref|ZP_06926333.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297243984|ref|ZP_06927874.1| 50S ribosomal protein L3 [Staphylococcus aureus A8796] gi|297589681|ref|ZP_06948322.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MN8] gi|300910949|ref|ZP_07128399.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus TCH70] gi|304379434|ref|ZP_07362169.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|42559569|sp|P60448|RL3_STAAM RecName: Full=50S ribosomal protein L3 gi|42559570|sp|P60449|RL3_STAAN RecName: Full=50S ribosomal protein L3 gi|42559571|sp|P60450|RL3_STAAW RecName: Full=50S ribosomal protein L3 gi|56749372|sp|Q6G771|RL3_STAAS RecName: Full=50S ribosomal protein L3 gi|56749401|sp|Q6GEI3|RL3_STAAR RecName: Full=50S ribosomal protein L3 gi|109893558|sp|Q2FEN9|RL3_STAA3 RecName: Full=50S ribosomal protein L3 gi|109893559|sp|Q2YYP6|RL3_STAAB RecName: Full=50S ribosomal protein L3 gi|123291758|sp|Q2FW06|RL3_STAA8 RecName: Full=50S ribosomal protein L3 gi|166234598|sp|A7X5G3|RL3_STAA1 RecName: Full=50S ribosomal protein L3 gi|172049048|sp|A6QJ92|RL3_STAAE RecName: Full=50S ribosomal protein L3 gi|189029483|sp|A6U3X5|RL3_STAA2 RecName: Full=50S ribosomal protein L3 gi|13702050|dbj|BAB43342.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus N315] gi|14248023|dbj|BAB58412.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus Mu50] gi|21205340|dbj|BAB96034.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MW2] gi|49242595|emb|CAG41316.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MRSA252] gi|49245475|emb|CAG43952.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MSSA476] gi|82657370|emb|CAI81811.1| 50S ribosomal protein L3 [Staphylococcus aureus RF122] gi|87127962|gb|ABD22476.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203720|gb|ABD31530.1| ribosomal protein L3, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|149947207|gb|ABR53143.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus JH1] gi|150375164|dbj|BAF68424.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus str. Newman] gi|156722700|dbj|BAF79117.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus Mu3] gi|253726363|gb|EES95092.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253727658|gb|EES96387.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus TCH130] gi|257272753|gb|EEV04855.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus 55/2053] gi|257276044|gb|EEV07495.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus 65-1322] gi|257279533|gb|EEV10120.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus 68-397] gi|257282577|gb|EEV12709.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus E1410] gi|257285255|gb|EEV15371.1| LSU ribosomal protein L3 [Staphylococcus aureus subsp. aureus M876] gi|257788568|gb|EEV26908.1| 50S ribosomal protein L3 [Staphylococcus aureus A9781] gi|257840485|gb|EEV64945.1| 50S ribosomal protein L3 [Staphylococcus aureus A9763] gi|257841832|gb|EEV66269.1| LSU ribosomal protein L3 [Staphylococcus aureus A9719] gi|257847108|gb|EEV71117.1| LSU ribosomal protein L3 [Staphylococcus aureus A9635] gi|257847566|gb|EEV71568.1| 50S ribosomal protein L3 [Staphylococcus aureus A9299] gi|257851775|gb|EEV75709.1| 50S ribosomal protein L3 [Staphylococcus aureus A8115] gi|257854715|gb|EEV77663.1| 50S ribosomal protein L3 [Staphylococcus aureus A6300] gi|257856327|gb|EEV79236.1| 50S ribosomal protein L3 [Staphylococcus aureus A6224] gi|257861538|gb|EEV84340.1| 50S ribosomal protein L3 [Staphylococcus aureus A5948] gi|257862604|gb|EEV85372.1| ribosomal protein L3 [Staphylococcus aureus A5937] gi|259160094|gb|EEW45127.1| 50S ribosomal protein L3 [Staphylococcus aureus 930918-3] gi|259163372|gb|EEW47930.1| 50S ribosomal protein L3 [Staphylococcus aureus D30] gi|262076173|gb|ACY12146.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ED98] gi|269941839|emb|CBI50249.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus TW20] gi|282312559|gb|EFB42963.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C101] gi|282315240|gb|EFB45624.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C427] gi|282318557|gb|EFB48915.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus D139] gi|282320820|gb|EFB51154.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus M899] gi|282323506|gb|EFB53822.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus WBG10049] gi|282326542|gb|EFB56844.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282329492|gb|EFB59013.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus Btn1260] gi|282591247|gb|EFB96320.1| 50S ribosomal protein L3 [Staphylococcus aureus A10102] gi|282593587|gb|EFB98580.1| 50S ribosomal protein L3 [Staphylococcus aureus A9765] gi|282596612|gb|EFC01571.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C160] gi|282763746|gb|EFC03874.1| 50S ribosomal protein L3 [Staphylococcus aureus A8117] gi|283471472|emb|CAQ50683.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus ST398] gi|283788620|gb|EFC27447.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus A017934/97] gi|285817912|gb|ADC38399.1| 50S ribosomal protein L3 [Staphylococcus aureus 04-02981] gi|290918731|gb|EFD95807.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus M1015] gi|291096434|gb|EFE26692.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus 58-424] gi|291466065|gb|EFF08594.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus M809] gi|294824162|gb|EFG40586.1| 50S ribosomal protein L3 [Staphylococcus aureus A9754] gi|294969871|gb|EFG45889.1| 50S ribosomal protein L3 [Staphylococcus aureus A8819] gi|295127182|gb|EFG56824.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus EMRSA16] gi|296885610|gb|EFH24547.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297178762|gb|EFH38007.1| 50S ribosomal protein L3 [Staphylococcus aureus A8796] gi|297578192|gb|EFH96905.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MN8] gi|298695506|gb|ADI98728.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ED133] gi|300887929|gb|EFK83124.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus TCH70] gi|302333886|gb|ADL24079.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus JKD6159] gi|302752123|gb|ADL66300.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304341966|gb|EFM07870.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312437339|gb|ADQ76410.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus TCH60] gi|312830599|emb|CBX35441.1| 50S ribosomal protein L3 (BL3) [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129670|gb|EFT85661.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus CGS03] gi|315193502|gb|EFU23898.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus CGS00] gi|315198220|gb|EFU28551.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus CGS01] gi|320140212|gb|EFW32071.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MRSA131] gi|320143482|gb|EFW35263.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MRSA177] gi|329723366|gb|EGG59895.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus 21172] gi|329730333|gb|EGG66723.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus 21193] gi|329732084|gb|EGG68439.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus 21189] Length = 220 Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 94/221 (42%), Positives = 123/221 (55%), Gaps = 11/221 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+QVG Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYK 60 Query: 54 -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 K +KP G + +PK+ + EFR D D VG S F G ++DVT Sbjct: 61 KDAKSNKYANKPAEGHAKKADAAPKRFIREFR-NVDVDAYEVGQEVSVDTFVAGDVIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH +HG HR+ GS G D RVFK +KM GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQSRGPMSHGSH-FHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 TV+NLEVV VD + +ILVKG VPG KK + +R S K Sbjct: 179 TVQNLEVVQVDTENKVILVKGNVPGPKKG-LVEIRTSIKKG 218 >gi|298531085|ref|ZP_07018486.1| 50S ribosomal protein L3 [Desulfonatronospira thiodismutans ASO3-1] gi|298509108|gb|EFI33013.1| 50S ribosomal protein L3 [Desulfonatronospira thiodismutans ASO3-1] Length = 210 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 84/204 (41%), Positives = 119/204 (58%), Gaps = 1/204 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 G++ +KLGMT V++ +G+ IPVTV+ C V+ + DK+GY A+Q+G + Sbjct: 4 TIGLIGKKLGMTSVFSDDGKFIPVTVIQAGPCPVIQKKDQDKDGYSAIQIGYDSMPGHKL 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP+RG + +KL EF + ++ P G + F G + +TG + GKGF+ Sbjct: 64 NKPVRGHQAKAGKGFFRKLTEFSPENVEEFEP-GQELNVEIFKPGDRIKLTGTSKGKGFA 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR NF GL THG HRS G+ G DPG+VFK KKM GRMG V+ KN E++S Sbjct: 123 GVMKRWNFRGLPRTHGHEKVHRSPGAIGQCADPGKVFKGKKMPGRMGNKTVSYKNAEIIS 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWIL 205 V + +ILVKG VPG + +L Sbjct: 183 VRTQDNVILVKGQVPGPRNGYVVL 206 >gi|220906719|ref|YP_002482030.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 7425] gi|254803669|sp|B8HMQ4|RL3_CYAP4 RecName: Full=50S ribosomal protein L3 gi|219863330|gb|ACL43669.1| ribosomal protein L3 [Cyanothece sp. PCC 7425] Length = 212 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 86/209 (41%), Positives = 124/209 (59%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT +++ E R IPVTV+ C + +T +GY A+QV GE + K+ Sbjct: 1 MAVGILGTKLGMTQIFDQERRAIPVTVVQAGPCPITQIKTKQTDGYAAIQVAFGEVRAKS 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SK G + N +P + L E+R + D VG V F+ GQ+VDVTG +IG+GF Sbjct: 61 LSKAELGHLAKSNTAPMRHLHEYR-TGEVDQFQVGQVLKADLFSAGQVVDVTGTSIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRHNF HG S +HR GSTG PGRV+ K+MAG++G R T++ L +V Sbjct: 120 AGYQKRHNFKRGPMAHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGQLGSARTTIRQLTIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VD +R L+L+KG VPG + + + + Sbjct: 179 RVDPERNLVLIKGAVPGKP-GALVSITPA 206 >gi|158317791|ref|YP_001510299.1| ribosomal protein L3 [Frankia sp. EAN1pec] gi|226725178|sp|A8LC56|RL3_FRASN RecName: Full=50S ribosomal protein L3 gi|158113196|gb|ABW15393.1| ribosomal protein L3 [Frankia sp. EAN1pec] Length = 236 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 93/205 (45%), Positives = 123/205 (60%), Gaps = 2/205 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ V +T D +GY AVQ+G GE + ++K Sbjct: 8 GLLGTKLGMTQVWDANNRVVPVTVIQAGPNVVTQVKTPDSDGYSAVQLGYGEIDPRRINK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 PMRG F + +P++ L E R + P G + F GQ+VDVTG + GKGF+G Sbjct: 68 PMRGHFETSGATPRRHLVELRTADAGNYRP-GQQLTGEVFDAGQVVDVTGTSKGKGFAGV 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GL A HGV HRS GS G PGRVFK +MAGRMG +RVTV L + +VD Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGHDRVTVAGLTIHAVD 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRD 208 +RG +L+KG +PG + VR Sbjct: 187 TERGFLLIKGAIPGPD-GGLVFVRS 210 >gi|170729700|ref|YP_001775133.1| 50S ribosomal protein L3 [Xylella fastidiosa M12] gi|226730591|sp|B0U5A7|RL3_XYLFM RecName: Full=50S ribosomal protein L3 gi|167964493|gb|ACA11503.1| 50S ribosomal protein L3 [Xylella fastidiosa M12] Length = 215 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 99/211 (46%), Positives = 130/211 (61%), Gaps = 2/211 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 G V RK GM+ V+ +GR IPVT++ +VV +T D +GY A+QV G + V Sbjct: 5 SMGFVGRKAGMSRVFLEDGRSIPVTLIEATANRVVQIKTSDVDGYDAIQVTVGSRRSVLV 64 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G F+ V + L+EFRV+K VGS S F VGQ VD+ G+T GKGF Sbjct: 65 NKPESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGF 124 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRHNF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG R +V+NLEV+ Sbjct: 125 QGTIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEVI 184 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D +R LI V+G +PGA +L+R + K Sbjct: 185 KIDVERFLIAVRGAIPGASGGD-VLIRSASK 214 >gi|15674081|ref|NP_268256.1| 50S ribosomal protein L3 [Lactococcus lactis subsp. lactis Il1403] gi|281492759|ref|YP_003354739.1| 50S ribosomal protein L3P [Lactococcus lactis subsp. lactis KF147] gi|42559688|sp|Q9CDW2|RL3_LACLA RecName: Full=50S ribosomal protein L3 gi|12725153|gb|AAK06197.1|AE006438_11 50S ribosomal protein L3 [Lactococcus lactis subsp. lactis Il1403] gi|281376411|gb|ADA65897.1| LSU ribosomal protein L3P [Lactococcus lactis subsp. lactis KF147] gi|326407632|gb|ADZ64703.1| 50S ribosomal protein L3 [Lactococcus lactis subsp. lactis CV56] Length = 207 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 121/212 (57%), Gaps = 6/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ ++++ +GY A QVG + Sbjct: 1 MSKGILGKKVGMTQIFTENGELIPVTVIEATPNTVLQVKSVETDGYEATQVGFDTLREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K + VG+ + F G +VDVTG + GKGF Sbjct: 61 TNKPAKGHAAKANTTPKRFVREF---KGLEGAEVGAEITVDTFAAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G +V K KK+AGRMG RVTV+NL + Sbjct: 118 QGPIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-ANKVPKGKKLAGRMGNKRVTVQNLVIA 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ +ILVKG VPGAKK S I+V+ + K+ Sbjct: 176 QVLPEKNVILVKGNVPGAKK-SLIVVKSAIKA 206 >gi|254495711|ref|ZP_05108627.1| 50S ribosomal protein L3 [Legionella drancourtii LLAP12] gi|254355058|gb|EET13677.1| 50S ribosomal protein L3 [Legionella drancourtii LLAP12] Length = 216 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 90/217 (41%), Positives = 125/217 (57%), Gaps = 1/217 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ EG +PV+V+ + +V +T++ +GY A+Q+ G K Sbjct: 1 MMIGLLGRKIGMTRVFTAEGVSVPVSVVEVHPNRVSQIKTMEADGYAAIQLTGGTKKASK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F+ + EF V +D + F GQ VDV+G T GKGF Sbjct: 61 VNKAQAGHFAKAEIEAGDMQVEFWVDSEDAFKAGQELSVADVFAAGQFVDVSGTTKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNF ATHG S SHR GS G Q PGRVFK KKMAG MG R TV++LE+V Sbjct: 121 AGTVKRHNFRTQDATHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNVRCTVQSLELV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 VD +R L+L+KG +PGA S + ++ + K + Sbjct: 181 RVDAERNLLLIKGAIPGAP-GSRVEIKPAAKKQARGE 216 >gi|309389933|gb|ADO77813.1| LSU ribosomal protein L3P [Halanaerobium praevalens DSM 2228] Length = 206 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 89/200 (44%), Positives = 120/200 (60%), Gaps = 4/200 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ +KLGMT + G +PVTV+ C V +T +K+GY +VQ+G GE K Sbjct: 1 MAKAILGKKLGMTQYFKDNGELVPVTVVEAGPCVVTQIKTTEKDGYNSVQLGFGEVKKHR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP G F S N+ PKK L EF+ D L GS F VG+ +DV+G++ GKGF Sbjct: 61 LNKPELGQFESRNLEPKKHLREFK--GLDMELSEGSEIKADIFEVGEKIDVSGISKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR N THG HR+ GS G D RV+K KM GRMG +RVT +NLE+V Sbjct: 119 AGNIKRWNHHRGPMTHGSH-FHRAPGSIGAV-DARRVYKGFKMPGRMGHDRVTERNLEIV 176 Query: 181 SVDDKRGLILVKGCVPGAKK 200 VD +R ++L+ G VPGAKK Sbjct: 177 KVDLERNVLLIAGPVPGAKK 196 >gi|284040621|ref|YP_003390551.1| 50S ribosomal protein L3 [Spirosoma linguale DSM 74] gi|283819914|gb|ADB41752.1| 50S ribosomal protein L3 [Spirosoma linguale DSM 74] Length = 220 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 88/206 (42%), Positives = 126/206 (61%), Gaps = 5/206 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT VYN +G+ + TV+ C V R+++K+GY AVQ+G G+ K K+ + Sbjct: 16 SGLIGKKIGMTSVYNADGQALACTVIETGPCVVTQVRSVEKDGYTAVQLGYGDKKEKHSN 75 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121 KP G F +PK+KL EF+ + + L +G+ + F VDV G G+GF Sbjct: 76 KPEMGHFKKAGTTPKRKLVEFK--EFEQELALGTTLTVADVFAETDFVDVVGTAKGRGFQ 133 Query: 122 GAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH FGG THG R GS G P RVFK +MAGRMGGNRV V+NL V+ Sbjct: 134 GVVKRHGFGGVGGQTHGQHNRGRHPGSIGACSFPSRVFKGLRMAGRMGGNRVKVQNLRVL 193 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 V ++ L++V G +PGA KNS++++ Sbjct: 194 RVLPEQNLLVVSGSIPGA-KNSYVII 218 >gi|188575490|ref|YP_001912419.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzae PXO99A] gi|188519942|gb|ACD57887.1| ribosomal protein L3 [Xanthomonas oryzae pv. oryzae PXO99A] Length = 207 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 90/208 (43%), Positives = 126/208 (60%), Gaps = 2/208 (0%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + RK GM+ ++ +GR +PVT++ ++ +T++ +GY AVQ+ G + V+KP Sbjct: 1 MGRKAGMSRIFTEDGRSVPVTLIEATPNRIAQIKTVEVDGYSAVQITVGARRAALVNKPA 60 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G F+ V + L+EFRV+ VG F VGQ VDV G+T GKGF G + Sbjct: 61 AGHFAKAKVEAGRGLWEFRVEDAHLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQGTI 120 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR+NF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + + +NLEVV VD Sbjct: 121 KRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVKVDV 180 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212 +RGLI + G VPGA ++VR + K+ Sbjct: 181 ERGLIAIHGAVPGAAGGD-VIVRPASKA 207 >gi|296111429|ref|YP_003621811.1| ribosomal protein L3 [Leuconostoc kimchii IMSNU 11154] gi|295832961|gb|ADG40842.1| ribosomal protein L3 [Leuconostoc kimchii IMSNU 11154] Length = 227 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 77/222 (34%), Positives = 121/222 (54%), Gaps = 7/222 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G I VTV+ V+ + + +GY A+Q+G + + Sbjct: 1 MTKGILGRKVGMTQVFTETGELIAVTVVEATPNVVLQVKNAETDGYSALQLGYQDKRAVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G S N +PK+ + E ++ + G F G+ VDVTG+T G GF Sbjct: 61 SNKPEQGHASKANTTPKRYIRE--IRNAEGEFNAGDEIKVDTFESGEYVDVTGITKGHGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +K+ +HG S HR GS G RVFK K + GRMG N+ T++N+ +V Sbjct: 119 QGNIKKDGQSRGPMSHG-SRYHRRPGSMGAV--INRVFKGKLLPGRMGNNKRTMQNVAIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK-SAVNCKGKVS 221 VD + L+L+KG VPGA K S + ++ + K +A + + K++ Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTIKSTVKTNAKHPEVKMA 216 >gi|319938507|ref|ZP_08012901.1| 50S ribosomal protein L3 [Coprobacillus sp. 29_1] gi|319806423|gb|EFW03090.1| 50S ribosomal protein L3 [Coprobacillus sp. 29_1] Length = 244 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 80/219 (36%), Positives = 122/219 (55%), Gaps = 8/219 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+ +G+ IPVTV+ + V+ +T+ +GY A+QVG + + K + Sbjct: 2 KGILGRKIGMTQVFTTDGKLIPVTVVEATSNVVLQKKTVATDGYDAIQVGFEDKREKLAT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K +G + +PK+ + EFR + VG F G++VDVTG + GKG+ G Sbjct: 62 KAHKGHVAKAETAPKRFIKEFRYDEMMS-YEVGQEIKVDSFVAGEVVDVTGTSKGKGYQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH HG S +HR GS G P R+ KK+ G+MG TV+NLE+V+V Sbjct: 121 VIKRHGQSIGPKGHG-SGAHRIVGSMGPIA-PNRIAPGKKLPGQMGNVTRTVQNLEIVAV 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 D + ++L+ G +PG KK + K+AV GKV+ Sbjct: 179 DVENNVLLISGSIPGPKKGLVV-----VKTAVKANGKVN 212 >gi|114330574|ref|YP_746796.1| ribosomal protein L3 [Nitrosomonas eutropha C91] gi|122314432|sp|Q0AIJ5|RL3_NITEC RecName: Full=50S ribosomal protein L3 gi|114307588|gb|ABI58831.1| LSU ribosomal protein L3P [Nitrosomonas eutropha C91] Length = 217 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 135/215 (62%), Gaps = 3/215 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +K+GMT ++ G +PVTVL + +VV +T +++GY A+Q+ G + Sbjct: 1 MKLGLIGKKVGMTRIFTESGSSVPVTVLDVSKNRVVQIKTAERDGYSAIQLTQGYRRKNR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 ++K + G F+ V K + EFR+++ L +GS + F G VDV+G++IGK Sbjct: 61 ITKALSGHFARAGVEAGKVIKEFRIEQQAINSDLKLGSEINVEIFLTGSKVDVSGVSIGK 120 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G++G +KRHNF RA+HG S SH GS G QDPGRVF KKM GR+GG T++N+E Sbjct: 121 GYAGTIKRHNFSSSRASHGNSRSHNVPGSIGMAQDPGRVFPGKKMTGRLGGVNSTIQNIE 180 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VV VD RGLI +KG VPG+K N + +R S K A Sbjct: 181 VVRVDTVRGLIFLKGSVPGSKGNG-VFIRPSVKHA 214 >gi|326692237|ref|ZP_08229242.1| 50S ribosomal protein L3 [Leuconostoc argentinum KCTC 3773] Length = 228 Score = 243 bits (622), Expect = 9e-63, Method: Composition-based stats. Identities = 79/219 (36%), Positives = 118/219 (53%), Gaps = 8/219 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G I VTV+ V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGRKVGMTQVFTETGELIAVTVVEATPNVVLQVKTVETDGYDAVQLGYQDKRAVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G S N +PK+ + E ++ + G F G+ VDVTG+T G GF Sbjct: 61 SNKPEQGHASKANTTPKRYVRE--IRNAEGEFNAGDEIKVDTFAAGEYVDVTGITKGHGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +K+ HG S HR GS G RVFK K + GRMG ++ T++N+ +V Sbjct: 119 QGNIKKDGQSRGPMAHG-SRYHRRPGSMGAI--INRVFKGKLLPGRMGNHKRTMQNVAIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 VD + L+L+KG VPGA K S + ++ + K VN K Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTIKSTVK--VNAKHP 211 >gi|163786190|ref|ZP_02180638.1| 50S ribosomal protein L3 [Flavobacteriales bacterium ALC-1] gi|159878050|gb|EDP72106.1| 50S ribosomal protein L3 [Flavobacteriales bacterium ALC-1] Length = 205 Score = 243 bits (622), Expect = 9e-63, Method: Composition-based stats. Identities = 85/205 (41%), Positives = 121/205 (59%), Gaps = 4/205 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G +A K+ + Sbjct: 2 SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCIVTQVRTEEVDGYSALQLGFDDATEKSAT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G S K+K+ EF+ + +G + FT G+ VDV G + GKGF G Sbjct: 62 KADLGHAKKAGTSVKRKVVEFKGFG--EEYKLGDAITVEQFTEGEFVDVAGTSKGKGFQG 119 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH F G +ATHG R+ GS G P RVFK KMAGRMGG V V+NL V Sbjct: 120 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGRMGGETVKVQNLRVYK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 V ++ L++VKGCVPG KNS++++ Sbjct: 180 VVPEKNLLVVKGCVPG-HKNSYVII 203 >gi|283767342|ref|ZP_06340257.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus H19] gi|283461221|gb|EFC08305.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus H19] Length = 220 Score = 243 bits (622), Expect = 9e-63, Method: Composition-based stats. Identities = 94/221 (42%), Positives = 123/221 (55%), Gaps = 11/221 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+QVG Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEAKENLVLQKKTVEVDGYNAIQVGFEDKKAYK 60 Query: 54 -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 K +KP G + +PK+ + EFR D D VG S F G ++DVT Sbjct: 61 KDAKSNKYANKPAEGHAKKADAAPKRFIREFR-NVDVDAYEVGQEVSVDTFVAGDVIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH +HG HR+ GS G D RVFK +KM GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQSRGPMSHGSH-FHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 TV+NLEVV VD + +ILVKG VPG KK + +R S K Sbjct: 179 TVQNLEVVQVDTENKVILVKGNVPGPKKG-LVEIRTSIKKG 218 >gi|317496190|ref|ZP_07954550.1| 50S ribosomal protein L3 [Gemella moribillum M424] gi|329770040|ref|ZP_08261435.1| 50S ribosomal protein L3 [Gemella sanguinis M325] gi|316913765|gb|EFV35251.1| 50S ribosomal protein L3 [Gemella moribillum M424] gi|328837351|gb|EGF86981.1| 50S ribosomal protein L3 [Gemella sanguinis M325] Length = 220 Score = 243 bits (622), Expect = 9e-63, Method: Composition-based stats. Identities = 90/223 (40%), Positives = 124/223 (55%), Gaps = 14/223 (6%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ G IPVTV+ V+ +T + GY A+Q+G + + + Sbjct: 1 MTKGILGRKVGMTQIFAENGELIPVTVVEAKGNVVLQKKTEEVEGYNAIQLGFDDKRPYD 60 Query: 61 V----------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 +KP +G N +PK+ + E R D VG F G LVD Sbjct: 61 KERKDRLVKVANKPEQGHADKANTAPKRFVREIR-DADVASYEVGQEVQVDIFAAGDLVD 119 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 VTG++ GKGF GA+KRH HG S HR GS G P RVFK K + G+MGG Sbjct: 120 VTGVSKGKGFQGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKALPGQMGGV 177 Query: 171 RVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VT +NLE+VSVD + GLILVKGC+PG+KK S++ ++ + KS Sbjct: 178 TVTTQNLEIVSVDVENGLILVKGCIPGSKK-SFVKIQSAVKSG 219 >gi|15837754|ref|NP_298442.1| 50S ribosomal protein L3 [Xylella fastidiosa 9a5c] gi|9106116|gb|AAF83962.1|AE003950_12 50S ribosomal protein L3 [Xylella fastidiosa 9a5c] Length = 210 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 100/210 (47%), Positives = 129/210 (61%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G V RK GM+ V+ +G IPVT++ +VV +T D +GY AVQV G + V+ Sbjct: 1 MGFVGRKAGMSRVFLEDGCSIPVTLIEATANRVVQIKTSDVDGYDAVQVTVGSRRSVLVN 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP G F+ V + L+EFRV+K VGS S F VGQ VD+ G+T GKGF Sbjct: 61 KPESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGFQ 120 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG R +V+NLEVV Sbjct: 121 GTIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEVVK 180 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D +R LI V+G +PGA +L+R + K Sbjct: 181 IDVERCLIAVRGAIPGASGGD-VLIRSASK 209 >gi|21672770|ref|NP_660837.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25009109|sp|Q8K950|RL3_BUCAP RecName: Full=50S ribosomal protein L3 gi|21623417|gb|AAM68048.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 209 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 91/209 (43%), Positives = 128/209 (61%), Gaps = 2/209 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +KLGM+ ++ EG IP+TV+ + ++ R + + Y A+QV G K+ + Sbjct: 2 IGLVGKKLGMSRIFTKEGSSIPITVIQIQENRITQIRNIKTDKYYAIQVTTGLKKLNRLK 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V P + L+EFR+ +++ +G + F + VDVTG++ GKGFSG Sbjct: 62 KPESGHFLKSGVIPGRGLWEFRI-NNNEKFQIGQSIKINIFNDIKKVDVTGISKGKGFSG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G NRVTV+NL +V + Sbjct: 121 TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGHLGNNRVTVQNLNIVKI 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D R L+LVKG VPG S ++V+ + K Sbjct: 181 DQNRNLLLVKGAVPGP-TGSDLIVKPAIK 208 >gi|302344356|ref|YP_003808885.1| 50S ribosomal protein L3 [Desulfarculus baarsii DSM 2075] gi|301640969|gb|ADK86291.1| 50S ribosomal protein L3 [Desulfarculus baarsii DSM 2075] Length = 207 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 88/209 (42%), Positives = 123/209 (58%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ EGR + VTVL + C VV +T D + Y A+Q+G G K KN Sbjct: 1 MLKGLIGKKVGMTRLFLEEGRAVAVTVLEVGPCHVVQIKTEDNDQYNALQLGFGAKKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP G F V L EFRV+ D VG + F +G V+VTG + G+GF Sbjct: 61 VNKPTAGHFKKAGVEATSTLREFRVEDVAD-FEVGQTITADMFKMGDSVNVTGRSKGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG +KRHNFGG R THG + +H + GS G DP RVFK ++ G G R V+NL++V Sbjct: 120 SGVVKRHNFGGGRDTHGCT-THDAPGSIGQSADPSRVFKGVRLPGHYGAERKQVRNLKIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 V ++ L++V+G VPG +LV + Sbjct: 179 DVRPEQNLVVVRGAVPGPN-GGIVLVEKA 206 >gi|302692256|ref|XP_003035807.1| hypothetical protein SCHCODRAFT_74210 [Schizophyllum commune H4-8] gi|300109503|gb|EFJ00905.1| hypothetical protein SCHCODRAFT_74210 [Schizophyllum commune H4-8] Length = 323 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 105/221 (47%), Positives = 139/221 (62%), Gaps = 5/221 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVV-HRTLDKNG--YMAVQVGAGEAK 57 +R+GV+ARK GMT ++N G PVTVL L+NCQV RT+ ++ Y AVQV A + Sbjct: 56 VRTGVIARKKGMTTIFNEHGVACPVTVLQLENCQVTANIRTVRRDHTVYHAVQVAASDKA 115 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 KN S M G F+ V PK+ + EF V D ++PVG+ S +F GQ VDV +IG Sbjct: 116 AKNTSIQMLGHFNKAGVPPKQVVKEFPVTPD-AVVPVGTTLSACHFVPGQYVDVVANSIG 174 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF G MKR FGGL A+HG SISHRS GSTG DP RV+ +KMAGR+G R T +NL Sbjct: 175 KGFQGGMKRWGFGGLAASHGASISHRSLGSTGQNTDPARVWPGRKMAGRLGNERTTTQNL 234 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 V +D++ ++ V+G VPG ++++ VRD+ K A K Sbjct: 235 LVERIDNELNIVYVRGAVPGVD-DAFVQVRDAKKKAAVGKH 274 >gi|295660136|ref|XP_002790625.1| 54S ribosomal protein L9 [Paracoccidioides brasiliensis Pb01] gi|226281500|gb|EEH37066.1| 54S ribosomal protein L9 [Paracoccidioides brasiliensis Pb01] Length = 297 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 97/215 (45%), Positives = 139/215 (64%), Gaps = 3/215 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+GV+A K GMT +++ G+R P T+L LD QV+ H+TL K+GY AVQVG G + Sbjct: 74 LRTGVLAVKKGMTAIFDQETGKRTPCTILQLDQVQVISHKTLKKHGYFAVQVGCGWKHER 133 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V++PM G F++ V+PK+ + EFRV+ + LLP+G V + +F GQ VD + G G Sbjct: 134 AVTRPMLGHFAANGVAPKRHIHEFRVKDESGLLPIGEVINADWFQEGQFVDARSNSRGMG 193 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F G MKRH F G +HGVS++HRS GS G Q G RV KKMAG MG +VT++NL+ Sbjct: 194 FEGVMKRHGFHGQDRSHGVSLAHRSLGSAGPSQGGGSRVHPGKKMAGNMGNEQVTLQNLK 253 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V+ VD ++G+++V G V G K + ++D+ K Sbjct: 254 VLKVDAEKGIVVVNGSVSGP-KGCIVKLQDALKKP 287 >gi|148544696|ref|YP_001272066.1| 50S ribosomal protein L3 [Lactobacillus reuteri DSM 20016] gi|184154049|ref|YP_001842390.1| 50S ribosomal protein L3 [Lactobacillus reuteri JCM 1112] gi|194466953|ref|ZP_03072940.1| ribosomal protein L3 [Lactobacillus reuteri 100-23] gi|227363819|ref|ZP_03847926.1| ribosomal protein L3 [Lactobacillus reuteri MM2-3] gi|227543623|ref|ZP_03973672.1| ribosomal protein L3 [Lactobacillus reuteri CF48-3A] gi|300909348|ref|ZP_07126809.1| 50S ribosomal protein L3 [Lactobacillus reuteri SD2112] gi|325683030|ref|ZP_08162546.1| 50S ribosomal protein L3 [Lactobacillus reuteri MM4-1A] gi|212288404|sp|A5VLK5|RL3_LACRD RecName: Full=50S ribosomal protein L3 gi|226730527|sp|B2G8X8|RL3_LACRJ RecName: Full=50S ribosomal protein L3 gi|148531730|gb|ABQ83729.1| LSU ribosomal protein L3P [Lactobacillus reuteri DSM 20016] gi|183225393|dbj|BAG25910.1| 50S ribosomal protein L3 [Lactobacillus reuteri JCM 1112] gi|194453989|gb|EDX42886.1| ribosomal protein L3 [Lactobacillus reuteri 100-23] gi|227071176|gb|EEI09492.1| ribosomal protein L3 [Lactobacillus reuteri MM2-3] gi|227186463|gb|EEI66534.1| ribosomal protein L3 [Lactobacillus reuteri CF48-3A] gi|300893213|gb|EFK86572.1| 50S ribosomal protein L3 [Lactobacillus reuteri SD2112] gi|324977380|gb|EGC14331.1| 50S ribosomal protein L3 [Lactobacillus reuteri MM4-1A] Length = 219 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 78/212 (36%), Positives = 120/212 (56%), Gaps = 5/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQIKTVENDGYSAVQLGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + E R + + VG F G+ VDVTG T G G+ Sbjct: 61 SNKPEQGHAAKANTTPKRFIGEIR-DAELGDIKVGDEVKADVFAEGETVDVTGTTKGHGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G + + N HG S HR GS G RVFK K+ GRMGG VT+++L+VV Sbjct: 120 QGNIHKDNQSRGPMAHG-SRYHRRPGSLGAI--INRVFKGMKLPGRMGGKTVTMQHLQVV 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++L+KG VPGA K S++ +++S K+ Sbjct: 177 KVDLDNNVLLIKGNVPGANK-SYVTIKNSVKA 207 >gi|194335445|ref|YP_002017239.1| ribosomal protein L3 [Pelodictyon phaeoclathratiforme BU-1] gi|226730543|sp|B4SBU7|RL3_PELPB RecName: Full=50S ribosomal protein L3 gi|194307922|gb|ACF42622.1| ribosomal protein L3 [Pelodictyon phaeoclathratiforme BU-1] Length = 209 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 87/207 (42%), Positives = 127/207 (61%), Gaps = 1/207 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT ++N + + T++ C V + DK GY A Q+G GE K K VSKP Sbjct: 4 ILGKKIGMTRLFNEKREAVSCTIIQAGPCFVTQVKRADKEGYDAYQIGIGERKEKKVSKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 ++G + V+P KL EF ++ + L +GS S FT G+ V+V G++ GKGF+G M Sbjct: 64 LQGHYKKAGVAPGFKLAEFDFKELNQELELGSAVSVESFTEGEKVNVLGVSKGKGFAGVM 123 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHNF G + THG S R+ GS G DP RVFK +MAGRMG + +TV+NL + + Sbjct: 124 KRHNFSGGQRTHGQSDRQRAPGSVGGSSDPSRVFKGTRMAGRMGSDNITVRNLVIFKIMP 183 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211 + LI++KG VPG KNS++ + + K Sbjct: 184 ESNLIVIKGSVPGP-KNSYVKIVSTKK 209 >gi|226198141|ref|ZP_03793712.1| 50S ribosomal protein L3 [Burkholderia pseudomallei Pakistan 9] gi|225929661|gb|EEH25677.1| 50S ribosomal protein L3 [Burkholderia pseudomallei Pakistan 9] Length = 208 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 93/201 (46%), Positives = 124/201 (61%), Gaps = 2/201 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++ EG IPVTVL + + +V +T++ +GY AVQV G + V+KP+ G + Sbjct: 1 MTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASRVTKPLAGHLAK 60 Query: 72 VNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130 V + L EFR++ D L G+V P F VGQ VDV G++IGKG++G +KR+NFG Sbjct: 61 AGVEAGEILKEFRIEADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKGYAGTIKRYNFG 120 Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190 RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+ +D R L+L Sbjct: 121 SGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEIARIDADRKLLL 180 Query: 191 VKGCVPGAKKNSWILVRDSFK 211 VKG VPGA K + V + K Sbjct: 181 VKGAVPGA-KGGKVFVTPAVK 200 >gi|148238770|ref|YP_001224157.1| 50S ribosomal protein L3 [Synechococcus sp. WH 7803] gi|166234602|sp|A5GIU5|RL3_SYNPW RecName: Full=50S ribosomal protein L3 gi|147847309|emb|CAK22860.1| 50S ribosomal protein L3 [Synechococcus sp. WH 7803] Length = 218 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 85/219 (38%), Positives = 131/219 (59%), Gaps = 4/219 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +G+ +PVT++ C++ +T + +GY AVQ+G GE + K Sbjct: 1 MSIGILGKKLGMSQLFDEQGKAVPVTLIEAGPCRITQLKTTETDGYSAVQIGFGETRDKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G + + L E+RV D + L +G + S F GQ VDV+G T+G+GF Sbjct: 61 VNKPAKGHLAKSGEGVLRHLSEYRVD-DVNGLELGGAVTVSDFEAGQKVDVSGDTMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F THG S +HR GSTG PGR++ K+MAGR GG + T + L ++ Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKTTTRGLTIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK-SAVNCKG 218 VD R L++VKG VPG + + +R + + A KG Sbjct: 179 KVDSDRNLLVVKGSVPGKP-GALLNIRPANRVGAKPAKG 216 >gi|113953361|ref|YP_729667.1| 50S ribosomal protein L3 [Synechococcus sp. CC9311] gi|123031873|sp|Q0ID05|RL3_SYNS3 RecName: Full=50S ribosomal protein L3 gi|113880712|gb|ABI45670.1| ribosomal protein L3 [Synechococcus sp. CC9311] Length = 218 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 80/219 (36%), Positives = 130/219 (59%), Gaps = 4/219 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ +G+ +PVT++ C++ ++ + +GY AVQ+G GE + K Sbjct: 1 MSIGILGKKLGMSQFFDEQGKAVPVTLIEAGPCRITQLKSSETDGYQAVQIGFGEIREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + + L E+RV D D + +G + F GQ VDV+G T+G+GF Sbjct: 61 INKPAKGHLAKSGEDLVRHLCEYRVD-DLDGIQLGGAVTVGDFAAGQKVDVSGDTMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F THG S +HR GS G PGR++ K+M+GR GG ++T + L ++ Sbjct: 120 AGLQKRHGFSRGPMTHG-SKNHRQPGSIGAGTTPGRIYPGKRMSGRYGGKKITTRGLTIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK-SAVNCKG 218 +D +R L++VKG VPG S + +R + + A KG Sbjct: 179 KIDSERNLLVVKGSVPGKP-GSLLNIRPANRVGAKPAKG 216 >gi|153872677|ref|ZP_02001498.1| Ribosomal protein L3 [Beggiatoa sp. PS] gi|152070858|gb|EDN68503.1| Ribosomal protein L3 [Beggiatoa sp. PS] Length = 213 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 91/214 (42%), Positives = 130/214 (60%), Gaps = 3/214 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G+V K GMT +++ G IPVTV+ ++ +T +GY A+QV + K Sbjct: 1 MALGIVGIKCGMTRLFDTAAGDVIPVTVIKAPPNRITQIKTQIHDGYQAIQVTSPLKVPK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 +++KP++G + +VS +EFR+ D L +G + F GQ VDVTG+T GK Sbjct: 61 HINKPIKGHLAKASVSTGFGFWEFRLANDTLKELKLGGEIDVTLFVTGQNVDVTGVTKGK 120 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF+G +KRH+F ATHG S+SHR+ GS G Q PGRVFK KKMAG +G R TV+NL Sbjct: 121 GFAGVVKRHHFRTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHLGCQRRTVQNLT 180 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 ++ V ++ L+L+KG VPGA N ++VR + K Sbjct: 181 IMRVIAEKNLLLIKGAVPGAP-NGTVIVRPAIKG 213 >gi|116334269|ref|YP_795796.1| 50S ribosomal protein L3 [Lactobacillus brevis ATCC 367] gi|122269049|sp|Q03PV7|RL3_LACBA RecName: Full=50S ribosomal protein L3 gi|116099616|gb|ABJ64765.1| LSU ribosomal protein L3P [Lactobacillus brevis ATCC 367] Length = 216 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 71/212 (33%), Positives = 111/212 (52%), Gaps = 5/212 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 G++ +K+GMT V+ G IPVTV+ V+ +T++ +GY A+Q+G + + Sbjct: 3 TKGILGKKVGMTQVFTDAGELIPVTVVEATPNVVLQVKTMENDGYNAIQLGYQDKREVLS 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP +G + N +PK+ + EF + V F G +VDVTG+T G G+ Sbjct: 63 NKPEQGHVAKANTTPKRFIREF-TDVELGDYKVADEVKVDTFQAGDIVDVTGVTKGHGYQ 121 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G + + HG S HR GS G RVF K+ GRMG +VT++NL +V Sbjct: 122 GNIHKDGQSRGPMAHG-SRYHRRPGSLGAI--INRVFPGMKLPGRMGNKQVTIQNLVIVK 178 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + ++L+KG VPGA K S + V+ + + Sbjct: 179 ADVENNVLLIKGNVPGANK-SLVTVKSAVRPP 209 >gi|86739295|ref|YP_479695.1| 50S ribosomal protein L3 [Frankia sp. CcI3] gi|109893429|sp|Q2JFH6|RL3_FRASC RecName: Full=50S ribosomal protein L3 gi|86566157|gb|ABD09966.1| LSU ribosomal protein L3P [Frankia sp. CcI3] Length = 235 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 93/209 (44%), Positives = 124/209 (59%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ V +T D +GY AVQ+G GE + ++K Sbjct: 8 GLLGTKLGMTQVWDANNRVVPVTVIKAGPNVVTQVKTPDSDGYSAVQLGYGEVDPRKINK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P RG F++ V+P++ L E R + P G + F+ G +VDVTG + GKGF+G Sbjct: 68 PARGHFATSGVTPRRHLVELRTADAGNYRP-GQELTGEVFSAGTVVDVTGTSKGKGFAGV 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GL A HGV HRS GS G PGRVFK +MAGRMG R T L + +VD Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGHVRTTTSGLTIHAVD 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +RG +LV+G VPG +LVR + K Sbjct: 187 TERGYLLVRGAVPGPD-GGLVLVRSAAKR 214 >gi|125625143|ref|YP_001033626.1| 50S ribosomal protein L3 [Lactococcus lactis subsp. cremoris MG1363] gi|166233151|sp|A2RNQ5|RL3_LACLM RecName: Full=50S ribosomal protein L3 gi|124493951|emb|CAL98946.1| 50S ribosomal protein L3 [Lactococcus lactis subsp. cremoris MG1363] gi|300071951|gb|ADJ61351.1| 50S ribosomal protein L3 [Lactococcus lactis subsp. cremoris NZ9000] Length = 207 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 121/212 (57%), Gaps = 6/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ ++++ +GY A QVG + Sbjct: 1 MSKGILGKKVGMTQIFTDNGELIPVTVIEATPNTVLQVKSVETDGYEATQVGFDTLREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EF K + VG+ + F G +VDVTG + GKGF Sbjct: 61 TNKPAKGHAAKANTTPKRFVREF---KGLEGAEVGAEITVDTFAAGDVVDVTGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH HG S HR GS G +V K KK+AGRMG RVTV+NL + Sbjct: 118 QGPIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-ANKVPKGKKLAGRMGNKRVTVQNLVIA 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V ++ +ILVKG VPGAKK S I+V+ + K+ Sbjct: 176 QVLPEKNVILVKGNVPGAKK-SLIVVKSAIKA 206 >gi|284049257|ref|YP_003399596.1| 50S ribosomal protein L3 [Acidaminococcus fermentans DSM 20731] gi|283953478|gb|ADB48281.1| 50S ribosomal protein L3 [Acidaminococcus fermentans DSM 20731] Length = 219 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 94/216 (43%), Positives = 130/216 (60%), Gaps = 5/216 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT ++ +G +PVTV+ C V+ ++T +K+GY AVQ+G G+ K K Sbjct: 1 MAKGILGKKLGMTQIFEADGTLVPVTVVEAGPCVVLQNKTEEKDGYNAVQLGFGDIKEKQ 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+GFF V+P K + E R+ + VG + F G LVD G++ GKGF Sbjct: 61 VNKPMKGFFDKAGVAPVKVVREVRLDAPSE-YKVGDKIAADIFAAGDLVDAVGVSRGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KRHNF HG S SHR GS G GRV K KK+ GRMGG TV+ L Sbjct: 120 AGTIKRHNFARGPMKHG-SKSHREPGSNGPMHSGPGGRVIKGKKLPGRMGGISATVQRLT 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 + VD R LI+VKG VPGA +++L+RD+ + V Sbjct: 179 IAKVDKDRNLIMVKGSVPGAA-GTFLLLRDTVRPDV 213 >gi|3984|emb|CAA46148.1| YmL9 mitochondrial ribosomal protein [Saccharomyces cerevisiae] Length = 269 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 97/212 (45%), Positives = 139/212 (65%), Gaps = 2/212 (0%) Query: 2 RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R G++ RK GM ++ G R T+L ++N +V++HRT + NGY A QVG G + Sbjct: 58 RCGLITRKKGMMPYFDKSTGERSAATILEVNNVEVIMHRTSEVNGYFACQVGYGSRHLSK 117 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS+ M G F+S V+PK+ + +FRV+ + L+P G++ PS+F GQ VDV ++ GKGF Sbjct: 118 VSRQMLGHFASKVVNPKEHVAQFRVKDEKGLIPPGTLLKPSFFKEGQYVDVRSVSKGKGF 177 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR+ F GLRA+HG SI HR GS G QDPGRV +KM G MG VT++N++V+ Sbjct: 178 TGVMKRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVL 237 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VDD+ +I VKG V G KNS++ ++D+ K Sbjct: 238 KVDDENNVIWVKGSVAGP-KNSFVKIQDAIKK 268 >gi|169630900|ref|YP_001704549.1| 50S ribosomal protein L3 [Mycobacterium abscessus ATCC 19977] gi|169242867|emb|CAM63895.1| 50S ribosomal protein L3 [Mycobacterium abscessus] Length = 205 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 84/204 (41%), Positives = 121/204 (59%), Gaps = 3/204 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V++ R +PVTV+ V RT +++GY AVQ+ GE + V+KP+ G F++ Sbjct: 1 MTQVFDDNNRVVPVTVVKAGPNVVTRIRTTEQDGYSAVQLAYGEISPRKVTKPVTGQFAA 60 Query: 72 VNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129 ++P++ L E R+ + VG + F+ G VDVTG + GKGF+G MKRH F Sbjct: 61 AGINPRRHLAELRLDDEAAAAEYEVGQELTAEIFSDGAYVDVTGTSKGKGFAGTMKRHGF 120 Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLI 189 G A+HG HR GS G PGRVFK +M+GRMG +RVT +NL V VD + G++ Sbjct: 121 RGQGASHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGSDRVTTQNLVVHKVDAENGVL 180 Query: 190 LVKGCVPGAKKNSWILVRDSFKSA 213 L+KG +PG +K ++VR + K Sbjct: 181 LIKGAIPG-RKGGLVVVRTAVKRG 203 >gi|28198353|ref|NP_778667.1| 50S ribosomal protein L3 [Xylella fastidiosa Temecula1] gi|42559619|sp|Q87E82|RL3_XYLFT RecName: Full=50S ribosomal protein L3 gi|212288597|sp|B2I8G9|RL3_XYLF2 RecName: Full=50S ribosomal protein L3 gi|28056423|gb|AAO28316.1| 50S ribosomal protein L3 [Xylella fastidiosa Temecula1] Length = 215 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 98/211 (46%), Positives = 129/211 (61%), Gaps = 2/211 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 G V RK GM+ V+ +G IPVT++ +VV +T D +GY AVQV G + V Sbjct: 5 SMGFVGRKAGMSRVFLEDGCSIPVTLIEATANRVVQIKTSDVDGYDAVQVTVGSRRSVLV 64 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G F+ V + L+EFRV+K VGS S F VGQ VD+ G+T GKGF Sbjct: 65 NKPESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGF 124 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRHNF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + +V+NLEV+ Sbjct: 125 QGTIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVKQSVQNLEVI 184 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D +R LI V+G +PGA +L+R + K Sbjct: 185 KIDVERCLIAVRGAIPGASGGD-VLIRSASK 214 >gi|189095434|ref|YP_001936447.1| ribosomal protein L3 [Heterosigma akashiwo] gi|157694777|gb|ABV66053.1| 50S ribosomal protein L3 [Heterosigma akashiwo] gi|157778008|gb|ABV70194.1| 50S ribosomal protein L3 [Heterosigma akashiwo] Length = 208 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 82/210 (39%), Positives = 121/210 (57%), Gaps = 3/210 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT +++ G +PVTV+ C V + +GY A+Q+G K+KN Sbjct: 1 MSIGILGTKIGMTQIFDENGLAVPVTVVQSGPCIVTQIKNFSTDGYNAIQIGFLAKKIKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +K +G F+ V P++ L EF+V+ ++ +G F +GQ V+VTG +IGKGF Sbjct: 61 TNKAEQGHFTKVGCQPQRILKEFKVESTEN-FTLGQQIKVDCFEIGQFVNVTGRSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KR+NF THG S +HR GS G PGRV KKMAG+ G VT+ L+V+ Sbjct: 120 SGLQKRYNFSRGPMTHG-SKNHRLPGSIGAGTTPGRVLPGKKMAGQYGNKNVTISKLKVL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 ++D K L+L+KG +PG N + + S Sbjct: 179 NIDSKENLLLLKGAIPGKAGN-IVSIAPSL 207 >gi|88807884|ref|ZP_01123395.1| 50S ribosomal protein L3 [Synechococcus sp. WH 7805] gi|88787923|gb|EAR19079.1| 50S ribosomal protein L3 [Synechococcus sp. WH 7805] Length = 218 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 85/219 (38%), Positives = 130/219 (59%), Gaps = 4/219 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +G+ +PVT++ C++ +T + +GY AVQ+G GE + K Sbjct: 1 MSIGILGKKLGMSQLFDEQGKAVPVTLIEAGPCRITQLKTTETDGYSAVQIGFGETRDKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G + + L E+RV D D L +G + F GQ VDV+G T+G+GF Sbjct: 61 VNKPAKGHLAKSGEGVLRHLSEYRVD-DVDGLELGGAVTVGDFEAGQKVDVSGDTMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F THG S +HR GSTG PGR++ K+MAGR GG + T + L ++ Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKTTTRGLTIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK-SAVNCKG 218 VD R L++VKG VPG + + +R + + A KG Sbjct: 179 RVDSDRNLLVVKGSVPGKP-GALLNIRPANRVGAKPAKG 216 >gi|198282637|ref|YP_002218958.1| 50S ribosomal protein L3 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666383|ref|YP_002424830.1| ribosomal protein L3 [Acidithiobacillus ferrooxidans ATCC 23270] gi|226725119|sp|B7J467|RL3_ACIF2 RecName: Full=50S ribosomal protein L3 gi|226725120|sp|B5ELX9|RL3_ACIF5 RecName: Full=50S ribosomal protein L3 gi|198247158|gb|ACH82751.1| ribosomal protein L3 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518596|gb|ACK79182.1| ribosomal protein L3 [Acidithiobacillus ferrooxidans ATCC 23270] Length = 210 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 93/212 (43%), Positives = 132/212 (62%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT + +GR +PVTV+H+ V + + +GY AVQV G + + Sbjct: 1 MVMGLIGRKVGMTRIVAGDGRVLPVTVIHVAPNTVAQVKDIATDGYCAVQVATGTRRPQR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ + G F ++P + L EFRV D G F GQ VDV+G++ GKGF Sbjct: 61 VTSALAGHFRKNGIAPGRLLREFRV-ADTANYACGMDIDLDIFAEGQRVDVSGVSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GA+KRHNF RA+HG S+SHR+ GS GCRQ PGRVFK KKMAG +G +VT NLE+V Sbjct: 120 AGAIKRHNFRSNRASHGNSLSHRAPGSIGCRQTPGRVFKGKKMAGHLGAEQVTTLNLELV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D R L+++KG VPGA+ +++R + + Sbjct: 180 RIDANRRLLMIKGAVPGARDGD-VMIRPAVRG 210 >gi|159463470|ref|XP_001689965.1| mitochondrial ribosomal protein L3 [Chlamydomonas reinhardtii] gi|158283953|gb|EDP09703.1| mitochondrial ribosomal protein L3 [Chlamydomonas reinhardtii] Length = 285 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 95/219 (43%), Positives = 135/219 (61%), Gaps = 2/219 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+G +A K GMT ++ G R+P+TVL +D CQVV +T +GY A+ +G+G + K Sbjct: 6 LRTGCIATKAGMTQEWDEHGVRVPLTVLWVDECQVVGLKTRPVHGYNALMLGSGYKRQKC 65 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +S GFF V KK + E++V +D L+PVG+ +++ GQ VDVTG T KGF Sbjct: 66 MSPSEAGFFLKAGVPFKKLVAEWQVSED-ALVPVGTAIGAAHYVAGQRVDVTGWTKWKGF 124 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G M+R F GL A+HGVS+SHR+ GS G RQDPG+++K KK+ G MG R TV N V Sbjct: 125 QGVMRRWGFKGLPASHGVSLSHRAPGSIGNRQDPGKIWKGKKLPGCMGDERRTVHNCLVY 184 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 VD R L+ ++G VPG S + +RDS ++ + Sbjct: 185 KVDAARNLVYLRGQVPGPVGRS-VFLRDSRLASPALRAS 222 >gi|91216910|ref|ZP_01253874.1| 50S ribosomal protein L3 [Psychroflexus torquis ATCC 700755] gi|91185071|gb|EAS71450.1| 50S ribosomal protein L3 [Psychroflexus torquis ATCC 700755] Length = 204 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 77/205 (37%), Positives = 119/205 (58%), Gaps = 3/205 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G + KN + Sbjct: 2 SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTNEVDGYEALQLGFDDKSDKNAT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F S K+K+ EF+ K++ +G + F + VDV+ + GKGF G Sbjct: 62 KADLGHFKKAGSSVKRKVIEFQGFKEE--YKLGDHITVDLFKENEFVDVSATSKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH F G + THG R+ GS G P R+FK KM G+MG +V V+NL V+ V Sbjct: 120 VVKRHGFAGSQRTHGQQSMLRAPGSVGAASYPARIFKGMKMGGQMGSQKVKVQNLRVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 ++ LI++KGCVPG N+++ ++ Sbjct: 180 VPEKNLIVIKGCVPG-HNNTYVTIQ 203 >gi|193211851|ref|YP_001997804.1| 50S ribosomal protein L3 [Chlorobaculum parvum NCIB 8327] gi|226725146|sp|B3QR75|RL3_CHLP8 RecName: Full=50S ribosomal protein L3 gi|193085328|gb|ACF10604.1| ribosomal protein L3 [Chlorobaculum parvum NCIB 8327] Length = 209 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 88/207 (42%), Positives = 122/207 (58%), Gaps = 1/207 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT +YN + +P TV+ C V ++ +K+GY A Q+G GE K V+KP Sbjct: 4 ILGKKIGMTRLYNNKREAVPCTVIQAGPCFVAQVKSTEKDGYDAYQLGFGERDEKKVTKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + G + +P L E L G+ + FT G++VDV G+T GKGF+G + Sbjct: 64 LAGHYKKAGKTPGYLLSEVSKSLIAGELEAGATVAVDVFTEGEIVDVLGVTKGKGFAGVV 123 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHNFGG THG S R+ GS G DP R FK +MAGRMGG TV+NLE+V V Sbjct: 124 KRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFKGTRMAGRMGGENKTVRNLEIVKVMP 183 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211 + LI+VKG VPG KNS++ + + K Sbjct: 184 ESNLIVVKGAVPGP-KNSYVKIVSTTK 209 >gi|319760329|ref|YP_004124267.1| 50S ribosomal protein L3 [Candidatus Blochmannia vafer str. BVAF] gi|318039043|gb|ADV33593.1| 50S ribosomal protein L3 [Candidatus Blochmannia vafer str. BVAF] Length = 217 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 90/208 (43%), Positives = 133/208 (63%), Gaps = 2/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT ++ +G IPVT++ + V+ + L ++GY AVQV G +KV ++K Sbjct: 3 GLIGRKLGMTRLFGEDGVSIPVTMVEVLPNHVIQIKNLKRDGYCAVQVTTGHSKVNCLNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G V P K L+EFRV D + +G V + F + VDVTG++ GKGFSG Sbjct: 63 PQLGHLKKAGVKPGKGLWEFRV-NSDSTISLGDVITIEIFKNAKEVDVTGISKGKGFSGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF A+HG S+SHR+ GS G Q PG+VFK KKMAG++G +RVTV+NL++++V+ Sbjct: 122 IKRWNFHTQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQLGNSRVTVQNLKIINVN 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 ++L+KG +PG ++V+ S K Sbjct: 182 LNDNVLLIKGAIPGTI-GEHVIVKKSIK 208 >gi|227431341|ref|ZP_03913394.1| ribosomal protein L3 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352934|gb|EEJ43107.1| ribosomal protein L3 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 228 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 84/219 (38%), Positives = 119/219 (54%), Gaps = 8/219 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G I VT + V+ + + +GY A+Q+G + + Sbjct: 1 MTKGILGRKVGMTQVFTESGELIAVTAVEATPNVVLQVKNAETDGYGAIQLGYQDKRTVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G S N +PK+ + E ++ D VG F G+ VDVTG+T G GF Sbjct: 61 SNKPEQGHASKANTAPKRYVRE--IRNAGDEFNVGDEIKVDTFQAGEYVDVTGITKGHGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR THG S HR GS G RVFK K + GRMG N+ T++N+ VV Sbjct: 119 QGAIKRLGQSRGPMTHG-SRYHRRPGSMGAI--INRVFKGKLLPGRMGNNKRTMQNIAVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 VD ++ L+L+KG VPGA K S + V+ + K VN K Sbjct: 176 HVDVEKNLLLLKGNVPGANK-SLLTVKSTVK--VNAKHP 211 >gi|259500892|ref|ZP_05743794.1| 50S ribosomal protein L3 [Lactobacillus iners DSM 13335] gi|302190655|ref|ZP_07266909.1| 50S ribosomal protein L3 [Lactobacillus iners AB-1] gi|309803703|ref|ZP_07697793.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 11V1-d] gi|309804974|ref|ZP_07699032.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 09V1-c] gi|309806693|ref|ZP_07700688.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 03V1-b] gi|309808420|ref|ZP_07702319.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 01V1-a] gi|309809118|ref|ZP_07702991.1| 50S ribosomal protein L3 [Lactobacillus iners SPIN 2503V10-D] gi|312871230|ref|ZP_07731328.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 3008A-a] gi|312872706|ref|ZP_07732771.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2062A-h1] gi|312874007|ref|ZP_07734042.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2052A-d] gi|312874981|ref|ZP_07735000.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2053A-b] gi|315654026|ref|ZP_07906942.1| 50S ribosomal protein L3 [Lactobacillus iners ATCC 55195] gi|325912351|ref|ZP_08174747.1| 50S ribosomal protein L3 [Lactobacillus iners UPII 143-D] gi|325913214|ref|ZP_08175583.1| 50S ribosomal protein L3 [Lactobacillus iners UPII 60-B] gi|329920622|ref|ZP_08277309.1| 50S ribosomal protein L3 [Lactobacillus iners SPIN 1401G] gi|259167586|gb|EEW52081.1| 50S ribosomal protein L3 [Lactobacillus iners DSM 13335] gi|308164301|gb|EFO66558.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 11V1-d] gi|308165734|gb|EFO67959.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 09V1-c] gi|308166873|gb|EFO69057.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 03V1-b] gi|308168248|gb|EFO70367.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 01V1-a] gi|308170563|gb|EFO72583.1| 50S ribosomal protein L3 [Lactobacillus iners SPIN 2503V10-D] gi|311089726|gb|EFQ48151.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2053A-b] gi|311090347|gb|EFQ48756.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2052A-d] gi|311091748|gb|EFQ50127.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2062A-h1] gi|311093244|gb|EFQ51590.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 3008A-a] gi|315488722|gb|EFU78368.1| 50S ribosomal protein L3 [Lactobacillus iners ATCC 55195] gi|325475822|gb|EGC78992.1| 50S ribosomal protein L3 [Lactobacillus iners UPII 143-D] gi|325477478|gb|EGC80621.1| 50S ribosomal protein L3 [Lactobacillus iners UPII 60-B] gi|328935880|gb|EGG32340.1| 50S ribosomal protein L3 [Lactobacillus iners SPIN 1401G] Length = 209 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 120/213 (56%), Gaps = 5/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V++ G +PVTV+ V+ +T + +GY AVQVG + + Sbjct: 1 MTKGILGRKVGMTQVFSKNGILVPVTVIEATPNVVLQVKTNESDGYEAVQVGYQDVREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +PK+ + E R + + VGS F+ G +VDVTG + G G Sbjct: 61 SNKPAKGHAAKAKTAPKRFIREIR-DVELEGYEVGSEIKVDTFSEGDVVDVTGTSKGHGT 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR THG S HR GS G RV K KK+ G MGG +VTV+NL + Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKKLPGHMGGKQVTVQNLVIE 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ ++L+KG VPGA KNS I+V+ + K+A Sbjct: 177 KVVPEKNVLLIKGNVPGA-KNSLIIVKSAVKAA 208 >gi|227538718|ref|ZP_03968767.1| ribosomal protein L3 [Sphingobacterium spiritivorum ATCC 33300] gi|300770251|ref|ZP_07080130.1| 50S ribosomal protein L3 [Sphingobacterium spiritivorum ATCC 33861] gi|227241637|gb|EEI91652.1| ribosomal protein L3 [Sphingobacterium spiritivorum ATCC 33300] gi|300762727|gb|EFK59544.1| 50S ribosomal protein L3 [Sphingobacterium spiritivorum ATCC 33861] Length = 205 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 98/205 (47%), Positives = 132/205 (64%), Gaps = 4/205 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +YN EG+ IP TV+ C V RT DK+GY AVQ+G GEAK KN + Sbjct: 2 SGIIGKKVGMTSLYNEEGKNIPCTVIEAGPCVVTQIRTEDKDGYSAVQLGFGEAKEKNTT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 ++G F+ N +PK+KL EF+ D+ +G V + F G+ VDV G + GKGF G Sbjct: 62 ASLKGHFAKANTTPKRKLVEFKTFPDE--KQLGDVVDVTIFEEGEYVDVVGTSKGKGFQG 119 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 MKRH FGG ATHG R+ GS G P RVFK +MAGR GG+RV V+NL+V+ Sbjct: 120 VMKRHGFGGVGGATHGQHNRLRAPGSLGASSWPSRVFKGMRMAGRTGGDRVKVQNLQVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 V ++ LI+V G +PGA K S+++V Sbjct: 180 VYAEQNLIVVSGSIPGA-KGSYVIV 203 >gi|227888853|ref|ZP_04006658.1| 50S ribosomal protein L3 [Lactobacillus johnsonii ATCC 33200] gi|227850690|gb|EEJ60776.1| 50S ribosomal protein L3 [Lactobacillus johnsonii ATCC 33200] Length = 209 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 84/213 (39%), Positives = 119/213 (55%), Gaps = 5/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ G +PVTV+ V+ +T + +GY AVQVG + + Sbjct: 1 MTKGILGRKVGMTQIFTKNGVLVPVTVIEATPNVVLQVKTNESDGYEAVQVGYQDMREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + SPK+ + E R + D VGS + F+ G +VDVTG T G G Sbjct: 61 SNKPAKGHAAKAKTSPKRFIREIRDVELKD-YEVGSEITVDSFSEGDVVDVTGTTRGHGT 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR THG S HR GS G RV K KK+ G MGG +VTV+NL + Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKKLPGHMGGKKVTVQNLVIE 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ ++L+KG VPGA KNS I V+ + K+A Sbjct: 177 KVVPEKNVLLIKGNVPGA-KNSLIFVKSAAKAA 208 >gi|194099923|ref|YP_002003061.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae NCCP11945] gi|193935213|gb|ACF31037.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae NCCP11945] gi|317165376|gb|ADV08917.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae TCDC-NG08107] Length = 203 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 98/201 (48%), Positives = 126/201 (62%), Gaps = 2/201 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K V+K G F+ Sbjct: 1 MTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANRVNKAEAGHFAK 60 Query: 72 VNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130 V + L EF + ++ L G + S F VGQLVDVTG + GKGFSG +KRHNFG Sbjct: 61 AGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKGFSGTIKRHNFG 120 Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190 R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEVV VD +R L+L Sbjct: 121 AQRTSHGNSRSHRVPGSIGVAQDPGRVFPGKRMAGQYGNTKATVQKLEVVRVDAERQLLL 180 Query: 191 VKGCVPGAKKNSWILVRDSFK 211 VKG VPGA NS ++VR S K Sbjct: 181 VKGAVPGAV-NSDVVVRPSVK 200 >gi|329314933|gb|AEB89346.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus T0131] Length = 220 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 93/221 (42%), Positives = 122/221 (55%), Gaps = 11/221 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+QVG Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYK 60 Query: 54 -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 K +KP G + +PK+ + EFR D D VG S F G ++DVT Sbjct: 61 KDAKSNKYANKPAEGHAKKADAAPKRFIREFR-NVDVDAYEVGQEVSVDTFVAGDVIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF G +KRH +HG HR+ GS G D RVFK +KM GRMGGN V Sbjct: 120 GVSKGKGFQGGIKRHGQSRGPMSHGSH-FHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 TV+NLEVV VD + +ILVKG VPG KK + +R S K Sbjct: 179 TVQNLEVVQVDTENKVILVKGNVPGPKKG-LVEIRTSIKKG 218 >gi|241888995|ref|ZP_04776299.1| 50S ribosomal protein L3 [Gemella haemolysans ATCC 10379] gi|329768273|ref|ZP_08259774.1| 50S ribosomal protein L3 [Gemella haemolysans M341] gi|241864244|gb|EER68622.1| 50S ribosomal protein L3 [Gemella haemolysans ATCC 10379] gi|328837472|gb|EGF87101.1| 50S ribosomal protein L3 [Gemella haemolysans M341] Length = 220 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 89/223 (39%), Positives = 124/223 (55%), Gaps = 14/223 (6%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ G IPVTV+ V+ +T + GY A+Q+G + + + Sbjct: 1 MTKGILGRKVGMTQIFAENGELIPVTVVEAKGNVVLQKKTEEVEGYNAIQLGFDDKRPYD 60 Query: 61 V----------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 +KP +G N +PK+ + E R + VG F G LVD Sbjct: 61 KERKDRLVKVANKPEQGHADKANTAPKRFVREIR-DAEVANYEVGQEVQVDIFAAGDLVD 119 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 VTG++ GKGF GA+KRH HG S HR GS G P RVFK K + G+MGG Sbjct: 120 VTGVSKGKGFQGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKALPGQMGGV 177 Query: 171 RVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VT +NLE+VSVD + GLILVKGC+PG+KK S++ ++ + KS Sbjct: 178 TVTTQNLEIVSVDVENGLILVKGCIPGSKK-SFVKIQSAVKSG 219 >gi|282852649|ref|ZP_06261991.1| 50S ribosomal protein L3 [Lactobacillus gasseri 224-1] gi|282556391|gb|EFB62011.1| 50S ribosomal protein L3 [Lactobacillus gasseri 224-1] Length = 209 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 85/213 (39%), Positives = 119/213 (55%), Gaps = 5/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ G +PVTV+ V+ +T + +GY AVQVG + + Sbjct: 1 MTKGILGRKVGMTQIFTKNGILVPVTVIEATPNVVLQVKTNESDGYEAVQVGYQDMREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + SPK+ + E R + D VGS + F+ G +VDVTG T G G Sbjct: 61 SNKPAKGHAAKAKTSPKRFIREIRDVELKD-YEVGSEITVDSFSEGDVVDVTGTTRGHGT 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR THG S HR GS G RV K KK+ G MGG +VTV+NL + Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKKLPGHMGGKKVTVQNLVIE 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ ++LVKG VPGA KNS I V+ + K+A Sbjct: 177 KVAPEKNVLLVKGNVPGA-KNSLIFVKSAAKAA 208 >gi|111220546|ref|YP_711340.1| 50S ribosomal protein L3 [Frankia alni ACN14a] gi|123339021|sp|Q0RRS1|RL3_FRAAA RecName: Full=50S ribosomal protein L3 gi|111148078|emb|CAJ59746.1| 50S ribosomal subunit protein L3 [Frankia alni ACN14a] Length = 234 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 92/209 (44%), Positives = 122/209 (58%), Gaps = 2/209 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ V +T D +GY AVQ+G GE + ++K Sbjct: 8 GLLGTKLGMTQVWDANNRVVPVTVIKAGPNVVTQVKTPDSDGYSAVQLGYGEIDPRKINK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P RG F++ V+P++ L E R + P G + F G +VDVTG + GKGF+G Sbjct: 68 PARGHFATSGVTPRRHLVELRTADAGNYRP-GQELTGEVFAEGTVVDVTGTSKGKGFAGV 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F GL A HGV HRS GS G PGRVFK +MAGRMG R T L + +VD Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGHARTTTPGLTIHAVD 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +RG +LVKG +PG + VR + K Sbjct: 187 TERGFLLVKGAIPGPD-GGLVFVRSAAKR 214 >gi|42518429|ref|NP_964359.1| 50S ribosomal protein L3 [Lactobacillus johnsonii NCC 533] gi|268318851|ref|YP_003292507.1| ribosomal protein L3 [Lactobacillus johnsonii FI9785] gi|300362389|ref|ZP_07058565.1| 50S ribosomal protein L3 [Lactobacillus gasseri JV-V03] gi|81832300|sp|Q74L88|RL3_LACJO RecName: Full=50S ribosomal protein L3 gi|41582714|gb|AAS08325.1| 50S ribosomal protein L3 [Lactobacillus johnsonii NCC 533] gi|262397226|emb|CAX66240.1| ribosomal protein L3 [Lactobacillus johnsonii FI9785] gi|300353380|gb|EFJ69252.1| 50S ribosomal protein L3 [Lactobacillus gasseri JV-V03] gi|329666692|gb|AEB92640.1| 50S ribosomal protein L3 [Lactobacillus johnsonii DPC 6026] Length = 209 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 84/213 (39%), Positives = 119/213 (55%), Gaps = 5/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ G +PVTV+ V+ +T + +GY AVQVG + + Sbjct: 1 MTKGILGRKVGMTQIFTKNGILVPVTVIEATPNVVLQVKTNESDGYEAVQVGYQDMREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + SPK+ + E R + D VGS + F+ G +VDVTG T G G Sbjct: 61 SNKPAKGHAAKAKTSPKRFIREIRDVELKD-YEVGSEITVDSFSEGDVVDVTGTTRGHGT 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR THG S HR GS G RV K KK+ G MGG +VTV+NL + Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKKLPGHMGGKKVTVQNLVIE 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ ++L+KG VPGA KNS I V+ + K+A Sbjct: 177 KVVPEKNVLLIKGNVPGA-KNSLIFVKSAAKAA 208 >gi|291298710|ref|YP_003509988.1| 50S ribosomal protein L3 [Stackebrandtia nassauensis DSM 44728] gi|290567930|gb|ADD40895.1| ribosomal protein L3 [Stackebrandtia nassauensis DSM 44728] Length = 220 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 97/216 (44%), Positives = 127/216 (58%), Gaps = 2/216 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ KLGMT V++ R +PVTV+ C V RT D +GY AVQ+ G+ + V+K Sbjct: 7 GILGTKLGMTQVWDENNRVVPVTVVQAGPCVVTQVRTPDTDGYSAVQLAFGQIDPRKVNK 66 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F+ V+P++ + E R D G + F G LVDVTG T GKG++G Sbjct: 67 PLSGHFAKAEVAPRRHVVELRTT-DATEYSAGDEITVDRFETGGLVDVTGKTKGKGYAGV 125 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH FGGL A HGV HRS GS G PGRVFK +MAGRMGG R TV+NL++ +VD Sbjct: 126 MKRHGFGGLGAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGGVRHTVQNLKIHAVD 185 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 L+L+KG +PG +LVR + K A K Sbjct: 186 ADNNLLLIKGALPGP-TGGLVLVRGAVKVAAKGGAK 220 >gi|228898863|ref|ZP_04063145.1| 50S ribosomal protein L3 [Bacillus thuringiensis IBL 4222] gi|228905907|ref|ZP_04069804.1| 50S ribosomal protein L3 [Bacillus thuringiensis IBL 200] gi|228937413|ref|ZP_04100059.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228963210|ref|ZP_04124379.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar sotto str. T04001] gi|228976869|ref|ZP_04137281.1| 50S ribosomal protein L3 [Bacillus thuringiensis Bt407] gi|229009619|ref|ZP_04166845.1| 50S ribosomal protein L3 [Bacillus mycoides DSM 2048] gi|229015512|ref|ZP_04172510.1| 50S ribosomal protein L3 [Bacillus cereus AH1273] gi|229021721|ref|ZP_04178303.1| 50S ribosomal protein L3 [Bacillus cereus AH1272] gi|229027958|ref|ZP_04184111.1| 50S ribosomal protein L3 [Bacillus cereus AH1271] gi|229074171|ref|ZP_04207217.1| 50S ribosomal protein L3 [Bacillus cereus Rock4-18] gi|229083430|ref|ZP_04215778.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-44] gi|229094832|ref|ZP_04225837.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-29] gi|229100909|ref|ZP_04231713.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-28] gi|229113786|ref|ZP_04243221.1| 50S ribosomal protein L3 [Bacillus cereus Rock1-3] gi|229165098|ref|ZP_04292893.1| 50S ribosomal protein L3 [Bacillus cereus AH621] gi|229170961|ref|ZP_04298562.1| 50S ribosomal protein L3 [Bacillus cereus MM3] gi|228612501|gb|EEK69722.1| 50S ribosomal protein L3 [Bacillus cereus MM3] gi|228618361|gb|EEK75391.1| 50S ribosomal protein L3 [Bacillus cereus AH621] gi|228669657|gb|EEL25064.1| 50S ribosomal protein L3 [Bacillus cereus Rock1-3] gi|228682488|gb|EEL36561.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-28] gi|228688575|gb|EEL42448.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-29] gi|228699863|gb|EEL52500.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-44] gi|228708941|gb|EEL61068.1| 50S ribosomal protein L3 [Bacillus cereus Rock4-18] gi|228733346|gb|EEL84175.1| 50S ribosomal protein L3 [Bacillus cereus AH1271] gi|228739589|gb|EEL90003.1| 50S ribosomal protein L3 [Bacillus cereus AH1272] gi|228745799|gb|EEL95803.1| 50S ribosomal protein L3 [Bacillus cereus AH1273] gi|228751641|gb|EEM01441.1| 50S ribosomal protein L3 [Bacillus mycoides DSM 2048] gi|228782839|gb|EEM31005.1| 50S ribosomal protein L3 [Bacillus thuringiensis Bt407] gi|228796468|gb|EEM43907.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar sotto str. T04001] gi|228822246|gb|EEM68228.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228853722|gb|EEM98482.1| 50S ribosomal protein L3 [Bacillus thuringiensis IBL 200] gi|228860763|gb|EEN05141.1| 50S ribosomal protein L3 [Bacillus thuringiensis IBL 4222] Length = 199 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 88/200 (44%), Positives = 124/200 (62%), Gaps = 4/200 (2%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V+ G IPVTV+ + V+ +T + +GY A+Q+G + + K +KP +G + Sbjct: 1 MTQVFAENGELIPVTVIAANPNVVLQKKTTETDGYNAIQLGFEDKREKLTNKPEQGHTAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 + +PK+ + E R D D L VG F G++VDVTG++ GKGF G +KRH Sbjct: 61 ASTTPKRFIREIR-DADVDGLEVGQEVKVEVFAAGEIVDVTGISKGKGFQGVIKRHGQSR 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 +HG S HR GS G P RVFK KK+AGRMGG++VT++NLE+V VD +R L+LV Sbjct: 120 GPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIVQVDTERNLLLV 177 Query: 192 KGCVPGAKKNSWILVRDSFK 211 KG VPGAKK S ++V+ + K Sbjct: 178 KGNVPGAKK-SLVVVQGAVK 196 >gi|116628963|ref|YP_814135.1| 50S ribosomal protein L3 [Lactobacillus gasseri ATCC 33323] gi|238853483|ref|ZP_04643861.1| 50S ribosomal protein L3 [Lactobacillus gasseri 202-4] gi|122274039|sp|Q046C5|RL3_LACGA RecName: Full=50S ribosomal protein L3 gi|116094545|gb|ABJ59697.1| LSU ribosomal protein L3P [Lactobacillus gasseri ATCC 33323] gi|238833923|gb|EEQ26182.1| 50S ribosomal protein L3 [Lactobacillus gasseri 202-4] Length = 209 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 85/213 (39%), Positives = 119/213 (55%), Gaps = 5/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ G +PVTV+ V+ +T + +GY AVQVG + + Sbjct: 1 MTKGILGRKVGMTQIFTKNGILVPVTVIEATPNVVLQVKTNESDGYEAVQVGYQDMREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + SPK+ + E R + D VGS + F+ G +VDVTG T G G Sbjct: 61 SNKPAKGHAAKAKTSPKRFIREIRDVELKD-YEVGSEITVDSFSEGDVVDVTGTTRGHGT 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR THG S HR GS G RV K KK+ G MGG +VTV+NL + Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKKLPGHMGGKKVTVQNLVIE 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V ++ ++LVKG VPGA KNS I V+ + K+A Sbjct: 177 KVVPEKNVLLVKGNVPGA-KNSLIFVKSAAKAA 208 >gi|86141140|ref|ZP_01059686.1| 50S ribosomal protein L3 [Leeuwenhoekiella blandensis MED217] gi|85831699|gb|EAQ50154.1| 50S ribosomal protein L3 [Leeuwenhoekiella blandensis MED217] Length = 203 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 82/205 (40%), Positives = 121/205 (59%), Gaps = 6/205 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G +AK + Sbjct: 2 SGLIGKKVGMTSIFDENGKNIPCTVIEAGPCVVTQVRTEEVDGYSALQLGFDDAKTA--N 59 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K +G K+K+ EF+ + +G + F GQ VDV G + GKGF G Sbjct: 60 KAAQGHAKKAGTVAKRKVVEFQ--DFEGEYKLGDAVTVEVFKEGQFVDVAGTSKGKGFQG 117 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG ++THG R+ GS G P RVFK +MAG+MG RV V+NL V+ Sbjct: 118 VVKRHGFGGVGQSTHGQHNRLRAPGSIGAASYPSRVFKGMRMAGQMGNERVKVQNLRVLK 177 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 V ++ L++VKGCVPG KNS++++ Sbjct: 178 VVAEKNLLVVKGCVPG-HKNSYVII 201 >gi|218245140|ref|YP_002370511.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 8801] gi|257058165|ref|YP_003136053.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 8802] gi|226725160|sp|B7K335|RL3_CYAP8 RecName: Full=50S ribosomal protein L3 gi|218165618|gb|ACK64355.1| ribosomal protein L3 [Cyanothece sp. PCC 8801] gi|256588331|gb|ACU99217.1| ribosomal protein L3 [Cyanothece sp. PCC 8802] Length = 212 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 85/211 (40%), Positives = 120/211 (56%), Gaps = 4/211 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT +++ G IPVTV+ C V +T D +GY A+QVG E K K Sbjct: 1 MAVGILGTKLGMTQIFDQETGMAIPVTVVQAGPCTVTQVKTPDTDGYTAIQVGYHEVKEK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++K G ++ P + L E+R+ D +G F G LVDV+G ++G+G Sbjct: 61 ALTKAEIGHLKKIDAPPLRHLKEYRLD-DSSQYQLGDAIKADIFNPGDLVDVSGKSMGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G KRHNF THG S +HR GSTG PGRV+ K+MAG+ G +VT+++L V Sbjct: 120 FAGYQKRHNFKRGNMTHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGQYGATQVTIRHLTV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V VD R LILVKG +PG + + + + Sbjct: 179 VRVDSDRNLILVKGAIPGKP-GTLLNITPAK 208 >gi|28377832|ref|NP_784724.1| 50S ribosomal protein L3 [Lactobacillus plantarum WCFS1] gi|300767821|ref|ZP_07077731.1| 50S ribosomal protein L3 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180011|ref|YP_003924139.1| 50S ribosomal protein L3 [Lactobacillus plantarum subsp. plantarum ST-III] gi|42559624|sp|Q88XY6|RL3_LACPL RecName: Full=50S ribosomal protein L3 gi|28270665|emb|CAD63571.1| ribosomal protein L3 [Lactobacillus plantarum WCFS1] gi|300494806|gb|EFK29964.1| 50S ribosomal protein L3 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045502|gb|ADN98045.1| 50S ribosomal protein L3 [Lactobacillus plantarum subsp. plantarum ST-III] Length = 209 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 117/211 (55%), Gaps = 5/211 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY A+Q+G + + Sbjct: 3 TKGILGKKVGMTQVFTESGELVPVTVVEVQPNVVLQVKTVENDGYEAIQLGVDDKREVLT 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP +G + +PK+ + E R + D VG F G VDVTG+T G G+ Sbjct: 63 NKPAQGHAAKAKTTPKRFIREIRNVELGD-YTVGDEVKADIFAAGDAVDVTGITKGHGYQ 121 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G + + HG S HR GS G RVFK KK+ GRMG ++ T++NL++V Sbjct: 122 GNIHKDGQSRGPMAHG-SRYHRRPGSMGAI--INRVFKGKKLPGRMGNHQRTMQNLQIVR 178 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D + ++L+KG VPGA K S++ V+ S KS Sbjct: 179 ADVENNVLLIKGNVPGANK-SFVTVKTSVKS 208 >gi|71891975|ref|YP_277705.1| 50S ribosomal subunit protein L3 [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|109893412|sp|Q493K8|RL3_BLOPB RecName: Full=50S ribosomal protein L3 gi|71796081|gb|AAZ40832.1| 50S ribosomal subunit protein L3 [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 217 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 86/216 (39%), Positives = 133/216 (61%), Gaps = 2/216 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +KLGMT +++ +G IPVT++ + +V + ++ +GY AVQV G K+++ Sbjct: 2 KGLIGQKLGMTRLFDKDGVSIPVTMIEITPHRVTQIKNIENDGYCAVQVTTGMKNFKHIN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +P G V + ++EFR ++ L +G + + F + VD+TG++ GKGF+ Sbjct: 62 RPETGHMIKSGVDAGRGVWEFRCEEAGMPQLSLGDIITIQIFKNVKKVDITGISKGKGFA 121 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR NF A+HG S+SHR+ GS G Q PGRVFK KKMAG++G +VTV+NL+VV+ Sbjct: 122 GTIKRWNFHMQDASHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGQLGNYKVTVQNLDVVN 181 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 VD K L+LVKG VPG + ++ S K + K Sbjct: 182 VDVKLNLLLVKGAVPGTIGGNL-SIKKSVKINIREK 216 >gi|323344636|ref|ZP_08084860.1| 50S ribosomal protein L3 [Prevotella oralis ATCC 33269] gi|323093906|gb|EFZ36483.1| 50S ribosomal protein L3 [Prevotella oralis ATCC 33269] Length = 204 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 82/205 (40%), Positives = 123/205 (60%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V++ +G+ P TV+ + C V +T++K+GY AVQ+G GEAK K + Sbjct: 3 GLIGRKIGMTSVFSADGKNTPCTVIEIGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTTM 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 PM G F +PKK L EF+ ++ +G + F + VDV G + GKGF G Sbjct: 63 PMMGIFKKAGTTPKKHLAEFKFDEE---YNLGDTLTVELFEGTEFVDVIGTSKGKGFQGV 119 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG ++THG R GS G P +VFK +MAG+MGG+RVT +NL V+ V Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLRVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 ++ L++VKG G ++ ++ + Sbjct: 180 IPEQNLLIVKGSFAGCNGSTVLIEK 204 >gi|228925363|ref|ZP_04088459.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228931612|ref|ZP_04094518.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228943916|ref|ZP_04106301.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228950658|ref|ZP_04112792.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228956551|ref|ZP_04118347.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229041015|ref|ZP_04189778.1| 50S ribosomal protein L3 [Bacillus cereus AH676] gi|229067875|ref|ZP_04201192.1| 50S ribosomal protein L3 [Bacillus cereus F65185] gi|229077410|ref|ZP_04210063.1| 50S ribosomal protein L3 [Bacillus cereus Rock4-2] gi|229107796|ref|ZP_04237432.1| 50S ribosomal protein L3 [Bacillus cereus Rock1-15] gi|229119772|ref|ZP_04249033.1| 50S ribosomal protein L3 [Bacillus cereus 95/8201] gi|229125627|ref|ZP_04254659.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-Cer4] gi|229136956|ref|ZP_04265583.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST26] gi|229142916|ref|ZP_04271357.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST24] gi|229148519|ref|ZP_04276775.1| 50S ribosomal protein L3 [Bacillus cereus m1550] gi|229159283|ref|ZP_04287307.1| 50S ribosomal protein L3 [Bacillus cereus R309803] gi|229176710|ref|ZP_04304114.1| 50S ribosomal protein L3 [Bacillus cereus 172560W] gi|228606753|gb|EEK64170.1| 50S ribosomal protein L3 [Bacillus cereus 172560W] gi|228624175|gb|EEK80977.1| 50S ribosomal protein L3 [Bacillus cereus R309803] gi|228634935|gb|EEK91508.1| 50S ribosomal protein L3 [Bacillus cereus m1550] gi|228640537|gb|EEK96926.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST24] gi|228646494|gb|EEL02701.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST26] gi|228657819|gb|EEL13625.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-Cer4] gi|228663673|gb|EEL19252.1| 50S ribosomal protein L3 [Bacillus cereus 95/8201] gi|228675645|gb|EEL30853.1| 50S ribosomal protein L3 [Bacillus cereus Rock1-15] gi|228705901|gb|EEL58234.1| 50S ribosomal protein L3 [Bacillus cereus Rock4-2] gi|228715234|gb|EEL67093.1| 50S ribosomal protein L3 [Bacillus cereus F65185] gi|228727312|gb|EEL78506.1| 50S ribosomal protein L3 [Bacillus cereus AH676] gi|228803116|gb|EEM49938.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228809009|gb|EEM55494.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228815749|gb|EEM61985.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228828040|gb|EEM73768.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228834285|gb|EEM79826.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 199 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 88/200 (44%), Positives = 124/200 (62%), Gaps = 4/200 (2%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V+ G IPVTV+ + V+ +T + +GY A+Q+G + + K +KP +G + Sbjct: 1 MTQVFAENGELIPVTVIAANPNVVLQKKTTETDGYNAIQLGFEDKREKLTNKPEQGHTAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 + +PK+ + E R D D L VG F G++VDVTG++ GKGF G +KRH Sbjct: 61 ASTTPKRFIREIR-DADVDGLEVGQEVKVDVFATGEIVDVTGISKGKGFQGVIKRHGQSR 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 +HG S HR GS G P RVFK KK+AGRMGG++VT++NLE+V VD +R L+LV Sbjct: 120 GPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIVQVDTERNLLLV 177 Query: 192 KGCVPGAKKNSWILVRDSFK 211 KG VPGAKK S ++V+ + K Sbjct: 178 KGNVPGAKK-SLVVVQGAVK 196 >gi|254556017|ref|YP_003062434.1| 50S ribosomal protein L3 [Lactobacillus plantarum JDM1] gi|254044944|gb|ACT61737.1| 50S ribosomal protein L3 [Lactobacillus plantarum JDM1] Length = 209 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 117/211 (55%), Gaps = 5/211 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY A+Q+G + + Sbjct: 3 TKGILGQKVGMTQVFTESGELVPVTVVEVQPNVVLQVKTVENDGYEAIQLGVDDKREVLT 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP +G + +PK+ + E R + D VG F G VDVTG+T G G+ Sbjct: 63 NKPAQGHAAKAKTTPKRFIREIRNVELGD-YTVGDEVKADIFAAGDAVDVTGITKGHGYQ 121 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G + + HG S HR GS G RVFK KK+ GRMG ++ T++NL++V Sbjct: 122 GNIHKDGQSRGPMAHG-SRYHRRPGSMGAI--INRVFKGKKLPGRMGNHQRTMQNLQIVR 178 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D + ++L+KG VPGA K S++ V+ S KS Sbjct: 179 ADVENNVLLIKGNVPGANK-SFVTVKTSVKS 208 >gi|15805340|ref|NP_294034.1| 50S ribosomal protein L3 [Deinococcus radiodurans R1] gi|42559707|sp|Q9RXK2|RL3_DEIRA RecName: Full=50S ribosomal protein L3 gi|28948921|pdb|1NKW|B Chain B, Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans gi|29726789|pdb|1NWX|B Chain B, Complex Of The Large Ribosomal Subunit From Deinococcus Radiodurans With Abt-773 gi|29726820|pdb|1NWY|B Chain B, Complex Of The Large Ribosomal Subunit From Deinococcus Radiodurans With Azithromycin gi|51247374|pdb|1SM1|B Chain B, Complex Of The Large Ribosomal Subunit From Deinococcus Radiodurans With Quinupristin And Dalfopristin gi|61680337|pdb|1XBP|B Chain B, Inhibition Of Peptide Bond Formation By Pleuromutilins: The Structure Of The 50s Ribosomal Subunit From Deinococcus Radiodurans In Complex With Tiamulin gi|146386617|pdb|2OGM|B Chain B, The Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans Complexed With The Pleuromutilin Derivative Sb-571519 gi|146386619|pdb|2OGN|B Chain B, The Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans Complexed With The Pleuromutilin Derivative Sb-280080 gi|146386621|pdb|2OGO|B Chain B, The Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans Complexed With The Pleuromutilin Derivative Retapamulin (Sb-275833) gi|190613491|pdb|2ZJP|B Chain B, Thiopeptide Antibiotic Nosiheptide Bound To The Large Ribosomal Subunit Of Deinococcus Radiodurans gi|190613521|pdb|2ZJQ|B Chain B, Interaction Of L7 With L11 Induced By Microccocin Binding To The Deinococcus Radiodurans 50s Subunit gi|190613552|pdb|2ZJR|B Chain B, Refined Native Structure Of The Large Ribosomal Subunit (50s) From Deinococcus Radiodurans gi|190613659|pdb|3CF5|B Chain B, Thiopeptide Antibiotic Thiostrepton Bound To The Large Ribosomal Subunit Of Deinococcus Radiodurans gi|203282458|pdb|3DLL|B Chain B, The Oxazolidinone Antibiotics Perturb The Ribosomal Peptidyl-Transferase Center And Effect Trna Positioning gi|323714542|pdb|3PIO|B Chain B, Crystal Structure Of The Synergistic Antibiotic Pair Lankamycin And Lankacidin In Complex With The Large Ribosomal Subunit gi|323714572|pdb|3PIP|B Chain B, Crystal Structure Of The Synergistic Antibiotic Pair Lankamycin And Lankacidin In Complex With The Large Ribosomal Subunit gi|6457985|gb|AAF09892.1|AE001892_3 ribosomal protein L3 [Deinococcus radiodurans R1] Length = 211 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 88/203 (43%), Positives = 116/203 (57%), Gaps = 6/203 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ K+GMT ++ R IPVTV+ C +V +T +GY AVQ+G + V+ Sbjct: 2 KGILGTKIGMTQIW-KNDRAIPVTVVLAGPCPIVQRKTAQTDGYEAVQIGYAPKAERKVN 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KPM+G F+ V+P + L EFR P G + F G+ +D TG + GKG G Sbjct: 61 KPMQGHFAKAGVAPTRILREFR-----GFAPDGDSVNVDIFAEGEKIDATGTSKGKGTQG 115 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKR NF G A+HG HR GS G R+ PGRV+K K+MAG MG RVTV+NLEVV + Sbjct: 116 VMKRWNFAGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGHMGMERVTVQNLEVVEI 175 Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205 LILVKG +PGA +L Sbjct: 176 RAGENLILVKGAIPGANGGLVVL 198 >gi|154249817|ref|YP_001410642.1| 50S ribosomal protein L3 [Fervidobacterium nodosum Rt17-B1] gi|171769379|sp|A7HM52|RL3_FERNB RecName: Full=50S ribosomal protein L3 gi|154153753|gb|ABS60985.1| ribosomal protein L3 [Fervidobacterium nodosum Rt17-B1] Length = 207 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 91/207 (43%), Positives = 128/207 (61%), Gaps = 4/207 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ARK+GMT ++ + + +PVTVL C VV +T++K+GY A+Q+G E K ++KP Sbjct: 4 IIARKVGMTRLW-KDEKVVPVTVLKAGPCVVVQKKTVEKDGYNAIQLGFEEVNEKKLTKP 62 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M G F NV P + L EFRV+ D VG + + F G +D+TG T G+G+SGAM Sbjct: 63 MLGVFKKANVKPMRVLKEFRVEN-VDQYSVGQEITVAIFQEGDKIDITGWTKGRGYSGAM 121 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR NF G HG HR GS G +P R+FK K+M GR G RVT+ N EVV++D Sbjct: 122 KRWNFQGGPKAHGA-KFHRELGSVGQHTEPARIFKGKRMPGRYGNERVTILNSEVVTIDA 180 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211 + L+ VKG VPGA + S +++R + K Sbjct: 181 QNNLLAVKGGVPGA-RGSLVIIRSAVK 206 >gi|169823852|ref|YP_001691463.1| 50S ribosomal protein L3 [Finegoldia magna ATCC 29328] gi|303234744|ref|ZP_07321370.1| 50S ribosomal protein L3 [Finegoldia magna BVS033A4] gi|226725177|sp|B0RZU0|RL3_FINM2 RecName: Full=50S ribosomal protein L3 gi|167830657|dbj|BAG07573.1| 50S ribosomal protein L3 [Finegoldia magna ATCC 29328] gi|302494085|gb|EFL53865.1| 50S ribosomal protein L3 [Finegoldia magna BVS033A4] Length = 209 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 90/208 (43%), Positives = 129/208 (62%), Gaps = 3/208 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT ++N +G +PVTV+ V +T +K GY A+QVG E K K+V++P Sbjct: 4 ILGKKIGMTQIFNEDGSVVPVTVIEAGPMVVTQIKTKEKEGYNAIQVGYIEKKEKHVNQP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 MRG F VS KK L EF++ DD+ +G F G +VDV G++ GKG GA+ Sbjct: 64 MRGHFGKAGVSFKKHLREFKI-NDDEQFNLGDEIKLDIFQDGDVVDVIGISKGKGTQGAI 122 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 RHN+ HG S SHR G+ P RVFK +K +G+MG +RVTV+NL++V VD+ Sbjct: 123 VRHNYSRGPMGHG-SKSHRVAGARSAGSYPARVFKGRKGSGKMGHDRVTVQNLKIVKVDN 181 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPG K + VR++ KS Sbjct: 182 ERNLLLIKGAVPG-NKGGVVTVREAIKS 208 >gi|218294754|ref|ZP_03495608.1| ribosomal protein L3 [Thermus aquaticus Y51MC23] gi|218244662|gb|EED11186.1| ribosomal protein L3 [Thermus aquaticus Y51MC23] Length = 206 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 96/211 (45%), Positives = 123/211 (58%), Gaps = 7/211 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ K+GMT +Y + R IPVTV+ C VV RT +K+GY AVQ+G K V+ Sbjct: 2 KGILGTKVGMTRIYRED-RAIPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLAQKPGRVN 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 +PM+G F+ V P + L E R D P G V + F G+ VDVTG + G+G +G Sbjct: 61 RPMKGHFAKAGVQPVRILKEIR-----DFNPEGDVVTVEIFKPGERVDVTGTSKGRGTAG 115 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKR NF G +HG HR GS G R+ PGRV+K KKMAG G RVTV NLEVV V Sbjct: 116 VMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGHYGAERVTVVNLEVVDV 175 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + L+LVKG VPG ++VR + K A Sbjct: 176 IPEENLLLVKGAVPGPN-GGLVVVRQTKKVA 205 >gi|310798524|gb|EFQ33417.1| 50S ribosomal protein L3 [Glomerella graminicola M1.001] Length = 347 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 104/217 (47%), Positives = 145/217 (66%), Gaps = 3/217 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+GV+A K GMT VY + +R+P TVL LD QVV ++T KNGY AVQ+GAG + +N Sbjct: 90 LRTGVLAIKKGMTAVYYGK-KRVPCTVLQLDQVQVVANKTRAKNGYWAVQIGAGSKEPRN 148 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V +P+ G++ + ++PK+ L EF+V+ ++ LLPVGS P +F GQ VDV + G GF Sbjct: 149 VERPLLGYYEAKGIAPKRHLAEFKVRSEEGLLPVGSQLFPDWFQTGQYVDVRSNSRGMGF 208 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179 +G MKRH F G A+HG S++HR+ G+TG Q G RV KKM GRMG RVTV+NL V Sbjct: 209 AGGMKRHGFAGQEASHGNSLNHRTIGTTGPSQGSGSRVLPGKKMPGRMGNERVTVQNLTV 268 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 + VD++ G++LVKG V G KN + ++D+ K Sbjct: 269 LKVDNELGVVLVKGAV-GGPKNCIVQLQDAKKRKPPA 304 >gi|308272979|emb|CBX29583.1| 50S ribosomal protein L3 [uncultured Desulfobacterium sp.] Length = 211 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 80/210 (38%), Positives = 124/210 (59%), Gaps = 2/210 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT +++ EG+ +PVTVL + C V ++ + +GY A+Q+G GE K Sbjct: 1 MCRGLIGKKLGMTVMFSSEGKCVPVTVLKVGPCVVTQIKSNETDGYNALQIGFGEKKKTR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP++G + + + EF V+ ++ +G + + F VG LVDV+G+ G+GF Sbjct: 61 INKPVQGHLKKGGLESCEYMREFSVENPEE-YKLGQILNIEMFNVGDLVDVSGIIKGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG +KRH F G R THG HR GS G P RVFK KK+ G G + T++NLE++ Sbjct: 120 SGVIKRHGFSGGRKTHGSHC-HRIPGSIGASAWPSRVFKGKKLPGHYGCCKQTMRNLEII 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V LIL+KG VPG + +++ + Sbjct: 179 DVRQHDNLILLKGAVPGPRSGMISVLKPNV 208 >gi|81429377|ref|YP_396378.1| 50S ribosomal protein L3 [Lactobacillus sakei subsp. sakei 23K] gi|109893434|sp|Q38UR2|RL3_LACSS RecName: Full=50S ribosomal protein L3 gi|78611020|emb|CAI56072.1| 50S ribosomal protein L3 [Lactobacillus sakei subsp. sakei 23K] Length = 210 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 84/211 (39%), Positives = 118/211 (55%), Gaps = 5/211 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG + + Sbjct: 3 TKGILGRKVGMTQVFTENGELIPVTVIAATPNVVLQVKTNETDGYEAIQVGFEDKREVLS 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP +G + N +PK+ + EFR VG+ F G +VDVTG+T G GF Sbjct: 63 NKPAKGHVAKANTTPKRFIREFR-DVALGDYEVGTEIKVDTFAAGDVVDVTGVTKGHGFQ 121 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +K+ HG S HR GS G RVFK K + GRMG N+ TV+NL VVS Sbjct: 122 GNIKKDGQSRGPMGHG-SRYHRRPGSMGAV--INRVFKGKLLPGRMGNNQRTVQNLVVVS 178 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D ++ +ILVKG VPGA KNS + ++ + K+ Sbjct: 179 TDVEKNVILVKGNVPGA-KNSMVTIKTAVKA 208 >gi|172038926|ref|YP_001805427.1| 50S ribosomal protein L3 [Cyanothece sp. ATCC 51142] gi|254803668|sp|B1WQQ9|RL3_CYAA5 RecName: Full=50S ribosomal protein L3 gi|171700380|gb|ACB53361.1| 50S ribosomal protein L3 [Cyanothece sp. ATCC 51142] Length = 212 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 85/211 (40%), Positives = 119/211 (56%), Gaps = 4/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT ++ E G IPVTV+ C + +T + +GY A+Q+G E K K Sbjct: 1 MAVGLLGTKLGMTQIFEEESGLAIPVTVVQAGPCTITQIKTAETDGYSAIQIGYLEVKEK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G V SP + L E+RV D +G F G LVD+ G ++G+G Sbjct: 61 ALTKPELGHLKKVEASPLRHLKEYRVD-DTATYTLGEAVKADIFNAGDLVDIAGTSMGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G KRHNF THG S +HR GSTG PGRV+ KKMAG+ G + T ++L+V Sbjct: 120 FAGYQKRHNFKRGSMTHG-SKNHRLPGSTGAGTTPGRVYPGKKMAGQYGAVKTTTRHLQV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V VD +R L+L+KG VPG + + + Sbjct: 179 VRVDAERNLLLIKGAVPGKP-GGLLNITPAK 208 >gi|170088428|ref|XP_001875437.1| predicted protein [Laccaria bicolor S238N-H82] gi|164650637|gb|EDR14878.1| predicted protein [Laccaria bicolor S238N-H82] Length = 315 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 107/215 (49%), Positives = 136/215 (63%), Gaps = 5/215 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVV-HRTLDKNG--YMAVQVGAGEAK 57 +R+GV+ARK GMT ++N +G R PVTVL L+NCQV R+ +N Y A+QV A + Sbjct: 47 IRTGVIARKRGMTALWNDQGVRYPVTVLQLENCQVTANIRSTRRNHTEYHAIQVAASDKP 106 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 K + M G F V PK+ + EF + D +PVG+ S +F GQ VDV +IG Sbjct: 107 AKGTTNQMLGHFRKAAVPPKRIVREFPITPD-AHIPVGTTLSAVHFVPGQFVDVVANSIG 165 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF G MKR F GL A+HGVS+SHRS GSTG QDPGR+F KKMAG MG R+T +NL Sbjct: 166 KGFQGGMKRWGFHGLAASHGVSVSHRSSGSTGQHQDPGRIFPGKKMAGHMGNKRITTQNL 225 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VV VD LI V+G VPG N+ +L+RD+ K Sbjct: 226 AVVRVDTALDLIFVRGAVPGVD-NAHVLIRDAKKK 259 >gi|312144247|ref|YP_003995693.1| 50S ribosomal protein L3 [Halanaerobium sp. 'sapolanicus'] gi|311904898|gb|ADQ15339.1| 50S ribosomal protein L3 [Halanaerobium sp. 'sapolanicus'] Length = 206 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 91/210 (43%), Positives = 126/210 (60%), Gaps = 5/210 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ +KLGMT + G +PVTV+ C V +T +K+GY AVQ+G GE K Sbjct: 1 MAKAILGKKLGMTQYFKDNGDVVPVTVVEAGPCVVTQIKTTEKDGYDAVQLGFGEVKKHR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP G F S N+ PKK L EF+ D L GS + F VG +V+V+G++ GKGF Sbjct: 61 LNKPKLGQFESRNLEPKKYLREFKGLDLD--LSEGSEVAADIFEVGDIVNVSGVSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR N +HG HR+ GS G D RVFK KKM GRMG NRVT +NLE+V Sbjct: 119 QGNIKRWNHHSGPMSHGSH-FHRAPGSIGSV-DARRVFKGKKMPGRMGHNRVTEENLEIV 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 VD +R ++L+ G VPG+KK + + ++ + Sbjct: 177 KVDLERNVLLIAGSVPGSKK-TILEIKSAK 205 >gi|260435636|ref|ZP_05789606.1| 50S ribosomal protein L3 [Synechococcus sp. WH 8109] gi|260413510|gb|EEX06806.1| 50S ribosomal protein L3 [Synechococcus sp. WH 8109] Length = 229 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 82/219 (37%), Positives = 128/219 (58%), Gaps = 4/219 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ +GR +PVT++ C++ + D +GY AVQ+G GE + K Sbjct: 12 MSIGILGKKLGMSQFFDEQGRAVPVTLIEAGPCRITQLKNDDTDGYSAVQIGFGETREKL 71 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + + L E+RV + L +G + F GQ VDV+G T+G+GF Sbjct: 72 INKPAQGHLNKSGEGLLRHLREYRVDS-VEGLEIGGAITVGDFEAGQKVDVSGDTVGRGF 130 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F THG S +HR GSTG PGR++ K+MAGR GG ++T + L ++ Sbjct: 131 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLTIL 189 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK-SAVNCKG 218 VD + L++VKG VPG + + +R + + A KG Sbjct: 190 KVDSEHNLLVVKGSVPGKP-GALLNIRPALRVGAKPAKG 227 >gi|222099967|ref|YP_002534535.1| 50S ribosomal protein L3 [Thermotoga neapolitana DSM 4359] gi|221572357|gb|ACM23169.1| 50S ribosomal protein L3 [Thermotoga neapolitana DSM 4359] Length = 210 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 93/206 (45%), Positives = 125/206 (60%), Gaps = 6/206 (2%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RK+GMT V+ I +PVTV+ C VV +T++ +GY AVQ+G +AK V+KP Sbjct: 7 IIGRKIGMTRVF-IGNEAVPVTVIKAGPCVVVQKKTVETDGYNAVQLGFEKAK--KVNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + G F V P + L EFRV D+ P G V F G+ VDVTG + G+GF+GAM Sbjct: 64 LAGHFKKFGVEPMRVLREFRVDNPDEYEP-GQVIKVDIFEKGEYVDVTGWSKGRGFAGAM 122 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR F G +HG S HR GS G +P +++K KKM GR G RVTV+NL+VV VD Sbjct: 123 KRWGFSGGPKSHG-SKFHRELGSVGQHTEPAKIWKGKKMPGRYGNERVTVRNLQVVDVDP 181 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSF 210 + LI VKG VPGA + +L+R + Sbjct: 182 ENDLIAVKGGVPGA-RGGLVLIRSAK 206 >gi|150025407|ref|YP_001296233.1| 50S ribosomal protein L3 [Flavobacterium psychrophilum JIP02/86] gi|166233142|sp|A6GZ99|RL3_FLAPJ RecName: Full=50S ribosomal protein L3 gi|149771948|emb|CAL43422.1| 50S ribosomal protein L3 [Flavobacterium psychrophilum JIP02/86] Length = 205 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 83/206 (40%), Positives = 124/206 (60%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ RK+GMT +++ G+ IP TV+ C V RT+ +GY A+Q+G + K+ + Sbjct: 2 SGLIGRKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTIGVDGYEALQLGFDDKNEKHST 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F KKK+ EF+ +G V S F+ G+ VD+ G++ GKGF G Sbjct: 62 KADLGHFKKAGTVAKKKVVEFQ--DFVSEHKLGDVISVDLFSEGEFVDIQGVSKGKGFQG 119 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG +ATHG R+ GS G P RVFK +MAGRMGG+ V V+NL V+ Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGGDNVKVQNLRVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L+++KGC+PG NS+++++ Sbjct: 180 VVAEKNLLVIKGCIPGCN-NSYVIIQ 204 >gi|182680994|ref|YP_001829154.1| 50S ribosomal protein L3 [Xylella fastidiosa M23] gi|182631104|gb|ACB91880.1| ribosomal protein L3 [Xylella fastidiosa M23] gi|307579463|gb|ADN63432.1| 50S ribosomal protein L3 [Xylella fastidiosa subsp. fastidiosa GB514] Length = 210 Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 98/210 (46%), Positives = 129/210 (61%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G V RK GM+ V+ +G IPVT++ +VV +T D +GY AVQV G + V+ Sbjct: 1 MGFVGRKAGMSRVFLEDGCSIPVTLIEATANRVVQIKTSDVDGYDAVQVTVGSRRSVLVN 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP G F+ V + L+EFRV+K VGS S F VGQ VD+ G+T GKGF Sbjct: 61 KPESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGFQ 120 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + +V+NLEV+ Sbjct: 121 GTIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVKQSVQNLEVIK 180 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D +R LI V+G +PGA +L+R + K Sbjct: 181 IDVERCLIAVRGAIPGASGGD-VLIRSASK 209 >gi|285017320|ref|YP_003375031.1| 50s ribosomal protein l3 [Xanthomonas albilineans GPE PC73] gi|283472538|emb|CBA15043.1| probable 50s ribosomal protein l3 [Xanthomonas albilineans] Length = 216 Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 128/210 (60%), Gaps = 2/210 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G V RK GM+ V+ +GR IPVT++ ++ +T++ +GY AVQ+ G +V V+K Sbjct: 8 GFVGRKAGMSRVFTEDGRSIPVTLIEATPNRITQLKTVENDGYSAVQITVGTRRVALVNK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P G F+ V + L+EFRV+ +G F VGQ VDV G+T GKGF G Sbjct: 68 PAAGHFAKAKVEAGRGLWEFRVEDAQLGDFAIGGEIKVDIFAVGQKVDVQGVTKGKGFQG 127 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHNF ATHG S+SHR GS G RQ PGRVF KKM+G MG + + +NLEVV V Sbjct: 128 TIKRHNFRMGDATHGNSLSHRVGGSLGQRQTPGRVFLGKKMSGHMGAVQQSTQNLEVVKV 187 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +RGLI ++G VPGA ++VR + K+ Sbjct: 188 DVERGLIAIRGAVPGAAGGD-VIVRPASKA 216 >gi|67923583|ref|ZP_00517055.1| Ribosomal protein L3 [Crocosphaera watsonii WH 8501] gi|67854553|gb|EAM49840.1| Ribosomal protein L3 [Crocosphaera watsonii WH 8501] Length = 213 Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 88/210 (41%), Positives = 121/210 (57%), Gaps = 4/210 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT ++ E G IPVTV+ C + +T + +GY AVQ+G E K K Sbjct: 1 MSVGLLGTKLGMTQIFEEESGLAIPVTVVQAGPCTITQIKTTETDGYSAVQLGYLEVKEK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G VN SP + L E+RV +D +G F+ G LVDV+G ++G+G Sbjct: 61 ALTKPELGHLKKVNASPLRHLKEYRV-EDTASYQLGEAVKADIFSTGDLVDVSGTSMGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G KRHNF THG S +HR GSTG PGRV+ KKMAG+ G + T + L V Sbjct: 120 FAGYQKRHNFKRGNMTHG-SKNHRLPGSTGAGTTPGRVYPGKKMAGQYGAAKTTTRKLTV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 V VD +R L+L+KG VPG + + + Sbjct: 179 VRVDTERNLLLIKGAVPGKP-GGLLNITPA 207 >gi|218779762|ref|YP_002431080.1| 50S ribosomal protein L3 [Desulfatibacillum alkenivorans AK-01] gi|226725162|sp|B8FET5|RL3_DESAA RecName: Full=50S ribosomal protein L3 gi|218761146|gb|ACL03612.1| ribosomal protein L3 [Desulfatibacillum alkenivorans AK-01] Length = 211 Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 85/203 (41%), Positives = 118/203 (58%), Gaps = 2/203 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGMT +++ +GR IPVTV+ C V +T DK+GY A+Q+G G K ++ Sbjct: 1 MSKGILGKKLGMTGLFSSDGRHIPVTVIEAGPCVVTQIKTKDKDGYNALQLGFGPKKERH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G F + + EF V ++ +G S F VG+ +DV G++ G+GF Sbjct: 61 TNKPETGHFEKSGGAAYVMVKEFAVDNPEE-FELGQSLSTELFAVGEKIDVAGVSKGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRH FGG R THG R GS GC P +V K KK+ G G R TV+NLE+V Sbjct: 120 AGVMKRHGFGGGRMTHGGRCK-RRPGSIGCSAWPSKVIKGKKLPGHYGVERKTVRNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSW 203 + + LIL+KG VPGAK Sbjct: 179 DIRADQNLILLKGAVPGAKSGML 201 >gi|189347703|ref|YP_001944232.1| 50S ribosomal protein L3 [Chlorobium limicola DSM 245] gi|226725145|sp|B3EGZ0|RL3_CHLL2 RecName: Full=50S ribosomal protein L3 gi|189341850|gb|ACD91253.1| ribosomal protein L3 [Chlorobium limicola DSM 245] Length = 209 Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 84/207 (40%), Positives = 126/207 (60%), Gaps = 1/207 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT +YN + I TV+ C V ++ +K+GY A Q+G GE K ++KP Sbjct: 4 ILGKKIGMTRLYNDKREAISCTVIQAGPCFVTQVKSAEKDGYDAYQIGIGERDEKKINKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M+G + V+P + EF+ + + L G+ S F G+ V+V G++ GKGF+G + Sbjct: 64 MQGHYRKAGVTPGFMMAEFKKTEFSENLEAGNPVSVESFKEGEKVNVLGVSKGKGFAGVV 123 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHNFGG THG S R+ GS G DP R F+ +MAGRMGG+ +TVKNLE+V + Sbjct: 124 KRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFRGTRMAGRMGGDNITVKNLEIVKIMP 183 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211 + L+++KG VPG KNS++ + K Sbjct: 184 ESNLLVIKGAVPGP-KNSYVKIVSIKK 209 >gi|226356897|ref|YP_002786637.1| 50S ribosomal protein L3 [Deinococcus deserti VCD115] gi|226318887|gb|ACO46883.1| putative 50S ribosomal protein L3 [Deinococcus deserti VCD115] Length = 206 Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 91/211 (43%), Positives = 121/211 (57%), Gaps = 7/211 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ K+GMT ++ + R +PVTV+ C VV +T +GY AVQ+G K V+ Sbjct: 2 KGILGTKVGMTQIWKGD-RAVPVTVVLAGPCPVVQRKTSVSDGYEAVQIGFAPKSEKRVN 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 +P G F VSP + L EFR + P G S F G+ +D TG + GKGF G Sbjct: 61 RPAAGHFKKYGVSPVRFLREFR-----NFNPDGDTVSVDIFAEGEKIDATGTSKGKGFQG 115 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKR NF G A+HG HR GS G R+ PGRV+K K+MAG MG +R+TV+NLEVV V Sbjct: 116 VMKRWNFKGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGHMGMDRITVQNLEVVEV 175 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 LILVKG +PGA +++R + K Sbjct: 176 RADENLILVKGAIPGAN-GGLVVLRQAAKGG 205 >gi|300174031|ref|YP_003773197.1| 50S ribosomal protein L3 [Leuconostoc gasicomitatum LMG 18811] gi|299888410|emb|CBL92378.1| 50S ribosomal protein L3 [Leuconostoc gasicomitatum LMG 18811] Length = 227 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 78/219 (35%), Positives = 117/219 (53%), Gaps = 8/219 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G I VTV+ V+ + + +GY A+Q+G + + Sbjct: 1 MTKGILGRKVGMTQVFTEIGELIAVTVVEATPNVVLQVKNAETDGYSALQLGYQDKRTVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G S N +PK+ + E ++ + G F G+ VDVTG+T G GF Sbjct: 61 SNKPEQGHASKANTTPKRYVRE--IRNAEGEFNAGDEIKVDTFEAGEYVDVTGITKGHGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +K+ +HG S HR GS G RVFK K + GRMG ++ T++N+ +V Sbjct: 119 QGNIKKDGQSRGPMSHG-SRFHRRPGSMGAV--INRVFKGKLLPGRMGNHKRTMQNVAIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 VD + L+L+KG VPGA K S + V+ + K VN K Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTVKSTVK--VNAKHP 211 >gi|78211928|ref|YP_380707.1| 50S ribosomal protein L3 [Synechococcus sp. CC9605] gi|109893567|sp|Q3AMN0|RL3_SYNSC RecName: Full=50S ribosomal protein L3 gi|78196387|gb|ABB34152.1| 50S ribosomal protein L3 [Synechococcus sp. CC9605] Length = 218 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 79/216 (36%), Positives = 125/216 (57%), Gaps = 3/216 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ +GR +PVT++ C++ + D +GY AVQ+G GE + K Sbjct: 1 MSIGILGKKLGMSQFFDEQGRAVPVTLIEAGPCRITQLKNDDTDGYSAVQIGFGETREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + + L E+RV + L +G + F GQ VDV+G T+G+GF Sbjct: 61 INKPAQGHLNKSGEGLLRHLREYRVDS-VEGLELGGAITVGDFEAGQKVDVSGDTVGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F THG S +HR GSTG PGR++ K+MAGR GG ++T + L ++ Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLTIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 VD + L++VKG VPG + + +R + + Sbjct: 179 KVDSEHNLLVVKGSVPGKP-GALLNIRPALRVGAKP 213 >gi|238061121|ref|ZP_04605830.1| 50S ribosomal protein L3 rplC [Micromonospora sp. ATCC 39149] gi|57547707|gb|AAW52546.1| RplC [Micromonospora sp. ATCC 39149] gi|237882932|gb|EEP71760.1| 50S ribosomal protein L3 rplC [Micromonospora sp. ATCC 39149] Length = 223 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 90/206 (43%), Positives = 126/206 (61%), Gaps = 3/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ + +PVTV+ C V R+ +K+GY AVQ+ G + V Sbjct: 6 KGILGAKLGMTQVWD-NNKVVPVTVVQAGPCVVSQVRSAEKDGYSAVQLAYGTIDPRKVK 64 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G ++ +V+P++ + E R D +G + F G +DVTG T GKG++G Sbjct: 65 KPVSGHYAKADVAPRRHIVELRTTDAAD-YSLGQEVTVEQFPAGVTIDVTGKTKGKGYAG 123 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F GLRA+HGV HRS GS G PGRVFK +MAGRMGG R TV+NL V ++ Sbjct: 124 PMKRHGFHGLRASHGVERKHRSPGSIGACATPGRVFKGTRMAGRMGGVRYTVQNLTVQAI 183 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRD 208 D + L+LV+G +PG K + +LVR Sbjct: 184 DTENNLLLVRGAIPGP-KGALVLVRT 208 >gi|281358743|ref|ZP_06245219.1| 50S ribosomal protein L3 [Victivallis vadensis ATCC BAA-548] gi|281314770|gb|EFA98807.1| 50S ribosomal protein L3 [Victivallis vadensis ATCC BAA-548] Length = 218 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 87/218 (39%), Positives = 123/218 (56%), Gaps = 5/218 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT VY+ +G IPVTV+ C V +T++++GY AVQ+G GE K KNV+ Sbjct: 2 KGLIGRKVGMTQVYDEKGVLIPVTVVQAGPCVVTDVKTVERDGYSAVQLGFGERKAKNVT 61 Query: 63 KPMRGFFSSVNVS---PKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 K G + V+ L E R D+ G+V + F +DV G T G+G Sbjct: 62 KARAGHLAKAGVTGDKLPSVLREIRTAAGDEAPAPGTVLNADVFEANDYLDVVGTTKGRG 121 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G ++R+ FGG RA+HG + R GS GC + PG V K K+M G MG TV+NL+V Sbjct: 122 FQGVVRRYRFGGGRASHGG-VWTRRTGSIGCCEWPGNVIKGKRMPGHMGNVPRTVQNLQV 180 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 V V + ++LVKG +PGA +L+R + K K Sbjct: 181 VRVMAEDNVLLVKGAIPGAN-GGILLIRSAIKKQTGAK 217 >gi|145596434|ref|YP_001160731.1| ribosomal protein L3 [Salinispora tropica CNB-440] gi|212288412|sp|A4XBP6|RL3_SALTO RecName: Full=50S ribosomal protein L3 gi|145305771|gb|ABP56353.1| LSU ribosomal protein L3P [Salinispora tropica CNB-440] Length = 219 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 93/206 (45%), Positives = 125/206 (60%), Gaps = 3/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ R +PVTV+ C V R+ +K+GY AVQ+ G + V Sbjct: 6 KGILGAKLGMTQVWD-NNRVVPVTVVQAGPCVVSQVRSQEKDGYAAVQLAYGAIDPRKVK 64 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G ++ +V+P++ + E R D G + F G VDVTG T GKG++G Sbjct: 65 KPISGHYAKADVAPRRHIVELRTT-DAGEYSSGQEVTVEEFPAGISVDVTGKTKGKGYAG 123 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F GLRA+HGV HRS GS G PGRVFK +MAGRMGG R TV+NL V +V Sbjct: 124 PMKRHGFHGLRASHGVERKHRSPGSIGGCATPGRVFKGTRMAGRMGGVRYTVQNLTVQAV 183 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRD 208 D + L+LV+G +PG K + +LVR Sbjct: 184 DTENNLLLVRGAIPGP-KGALVLVRT 208 >gi|119358191|ref|YP_912835.1| 50S ribosomal protein L3 [Chlorobium phaeobacteroides DSM 266] gi|166233130|sp|A1BJ34|RL3_CHLPD RecName: Full=50S ribosomal protein L3 gi|119355540|gb|ABL66411.1| LSU ribosomal protein L3P [Chlorobium phaeobacteroides DSM 266] Length = 209 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 83/207 (40%), Positives = 124/207 (59%), Gaps = 1/207 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT +YN + I T++ C V + +K+GY A Q+G GE K V+KP Sbjct: 4 ILGKKIGMTRLYNDKREAISCTIIQAGPCFVTQVKHAEKDGYDAYQIGIGERDEKKVNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M G + V+P K+ EF + + L G+ S F G+ ++V G++ GKGF+G + Sbjct: 64 MLGHYKKAGVTPGYKIAEFSKSEINLELEAGAPLDLSVFKEGEKINVLGVSKGKGFAGVV 123 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHNFGG THG S R+ GS G DP R F+ +MAGRMGG +TVKNLE++ + Sbjct: 124 KRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFRGTRMAGRMGGCNITVKNLEIIRIMP 183 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211 + L++VKG +PG KNS++ + + K Sbjct: 184 ESNLLVVKGAIPGP-KNSYVKIVSTKK 209 >gi|313887083|ref|ZP_07820782.1| 50S ribosomal protein L3 [Porphyromonas asaccharolytica PR426713P-I] gi|312923494|gb|EFR34304.1| 50S ribosomal protein L3 [Porphyromonas asaccharolytica PR426713P-I] gi|332176633|gb|AEE12323.1| 50S ribosomal protein L3 [Porphyromonas asaccharolytica DSM 20707] Length = 205 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 82/204 (40%), Positives = 124/204 (60%), Gaps = 4/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EG +P TV+ + C V +T D++GY A+Q+G +AK K+ ++ Sbjct: 3 GLLGKKIGMTSVFSAEGVNVPCTVIEVGPCVVTQVKTADRDGYEAIQLGFQDAKDKHTTR 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F + V+ K+ L EF D +G + F VDV G + GKGF G Sbjct: 63 PLQGHFKAAGVTNKRHLAEFMGFGSD--YKLGDEITVELFNDTHYVDVHGTSKGKGFQGV 120 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG ++THG R+ GS G P +VFK +MAG++G RVTV+NLEV+ V Sbjct: 121 VKRHGFGGVGQSTHGQDDRLRAPGSVGACSYPAKVFKGTRMAGQLGNKRVTVQNLEVIKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 + ++++KG VPGA K S I + Sbjct: 181 MPEHNILVLKGSVPGA-KGSIIAI 203 >gi|78357300|ref|YP_388749.1| 50S ribosomal protein L3 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|109893427|sp|Q30Z42|RL3_DESDG RecName: Full=50S ribosomal protein L3 gi|78219705|gb|ABB39054.1| LSU ribosomal protein L3P [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 209 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 93/206 (45%), Positives = 128/206 (62%), Gaps = 2/206 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 + G++ RK+GMT ++ +G + VTV+ C V+ + K+GY AVQ+G EAK K+V Sbjct: 4 KMGILGRKIGMTRIFANDGSAVAVTVIQAGPCPVIQVKDAAKDGYNAVQIGFEEAKEKHV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP RG + L E R++ + VG + FT G+ V VTG +IGKGF+ Sbjct: 64 NKPARGHMDKAGRGLFRVLREIRLEAPAE-QKVGDDLTVGLFTPGEFVKVTGTSIGKGFA 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR NFGG+ A+HG HRS GS G PG+V+KNKKMAG MG +VTVK+L+++ Sbjct: 123 GVMKRWNFGGMPASHGHEAVHRSPGSIGHATFPGKVWKNKKMAGHMGARQVTVKSLQIIE 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V + LILVKG VPG KN ++VR Sbjct: 183 VRAEDNLILVKGPVPGP-KNGLVMVR 207 >gi|304438907|ref|ZP_07398830.1| 50S ribosomal protein L3 [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372573|gb|EFM26156.1| 50S ribosomal protein L3 [Peptoniphilus duerdenii ATCC BAA-1640] Length = 210 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 88/207 (42%), Positives = 126/207 (60%), Gaps = 3/207 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT +++ G PVTV+ VV ++++ +GY AVQV +G+ K+ V+KP Sbjct: 4 LIGKKVGMTQLFDENGTVTPVTVIQAMPNVVVQKKSVETDGYNAVQVASGDVKLNRVNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +G F NV PKK L EF+ D D +G + + F+ G VDV G + GKG G + Sbjct: 64 TKGHFEKANVEPKKYLNEFKTD-DLDSYEIGKELNVTIFSEGDFVDVVGTSKGKGTQGVV 122 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 RH FG R THG S HR G G PG+V+KN +MAG+ G RVTV+NL VV VD+ Sbjct: 123 TRHGFGRGRETHG-SKFHRMPGGMGAATYPGKVWKNHRMAGKTGNERVTVQNLLVVRVDE 181 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211 +R LI VKG +PG K+ + V+++ K Sbjct: 182 ERNLIFVKGSIPGPKRGK-VTVKETVK 207 >gi|225850735|ref|YP_002730969.1| 50S ribosomal protein L3 [Persephonella marina EX-H1] gi|254803685|sp|C0QQM3|RL3_PERMH RecName: Full=50S ribosomal protein L3 gi|225645055|gb|ACO03241.1| 50S ribosomal protein L3 [Persephonella marina EX-H1] Length = 227 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 92/210 (43%), Positives = 129/210 (61%), Gaps = 3/210 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ +G+ IPVTV+ ++ VV RT DK+GY AV +G GE K K Sbjct: 1 MPKGIIGKKIGMTRVF-KDGKAIPVTVIQVEPNYVVNIRTEDKDGYSAVVLGTGEKKEKR 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 KPM F + P + L EF +++ + P V F G LVDVTG + G+GF Sbjct: 60 TPKPMLAIFKKAGLKPLRHLAEFPLKEGEQPEPGQEVKVEDVFEKGDLVDVTGTSKGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 + AMKR +F G + +HG S HR+ GS G DPGRV+K K+MAG G +TV+ LEVV Sbjct: 120 ASAMKRWDFSGFKKSHG-SRYHRAVGSIGACSDPGRVWKTKRMAGHYGNETITVQGLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 + ++ +ILVKG VPGA K S + +++S Sbjct: 179 DIIPEKNIILVKGSVPGAPK-SVVKLKESV 207 >gi|297618384|ref|YP_003703543.1| 50S ribosomal protein L3 [Syntrophothermus lipocalidus DSM 12680] gi|297146221|gb|ADI02978.1| 50S ribosomal protein L3 [Syntrophothermus lipocalidus DSM 12680] Length = 212 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 82/210 (39%), Positives = 128/210 (60%), Gaps = 4/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT +++ R VTV+ C V+ +T+ +GY A+QVG G K ++ Sbjct: 7 KGLLGVKLGMTQLFDENDRATAVTVVEAGPCIVLQKKTVATDGYNAIQVGFGSVKESKIT 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G ++ NV P + + EFRV+ DD VG F G ++DVTG++ GKGF+G Sbjct: 67 KPLKGHLANANVKPVRFIREFRVENIDD-YQVGQEIRVDIFKEGDIIDVTGISKGKGFAG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHNF HG S HR G+ G + P RVFK +K+ GR+GG +VTV+ L VV V Sbjct: 126 GIKRHNFQRGAMAHG-SKYHRRPGALGAKG-PARVFKGRKLPGRLGGEKVTVQRLRVVKV 183 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 ++ ++L+KG +PG ++ + +++S K+ Sbjct: 184 YPEKNILLIKGAIPGPRRG-LVTIKNSAKA 212 >gi|86610028|ref|YP_478790.1| 50S ribosomal protein L3 [Synechococcus sp. JA-2-3B'a(2-13)] gi|109893564|sp|Q2JIM7|RL3_SYNJB RecName: Full=50S ribosomal protein L3 gi|86558570|gb|ABD03527.1| ribosomal protein L3 [Synechococcus sp. JA-2-3B'a(2-13)] Length = 214 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 84/211 (39%), Positives = 124/211 (58%), Gaps = 4/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT +++ EG IPVTV+ C V +T +GY A+Q+G K+ Sbjct: 1 MALGILGRKVGMTQIFSPEGLAIPVTVVQAGPCTVTQIKTQATDGYNAIQLGYLPTAEKH 60 Query: 61 VSKPMRGFFSSVNV-SPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +++ RG + V + L EFRV + +G + F+ GQLVDV G +IG+G Sbjct: 61 LTRAQRGHLTKAGVTELLRHLREFRVD-QPEAYQLGQKITVEMFSPGQLVDVAGTSIGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G KRH+FG +HG S +HR GS G PGRVF +MAGR+GG RVT + L++ Sbjct: 120 FAGYQKRHHFGRGPMSHG-SKNHRRPGSIGAGTTPGRVFPGMRMAGRLGGGRVTTRKLQL 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V VD +R L+++KGCVPG + + + + Sbjct: 179 VQVDPERDLLVIKGCVPGVE-GGLLEITPAK 208 >gi|313204917|ref|YP_004043574.1| LSU ribosomal protein l3p [Paludibacter propionicigenes WB4] gi|312444233|gb|ADQ80589.1| LSU ribosomal protein L3P [Paludibacter propionicigenes WB4] Length = 205 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 82/204 (40%), Positives = 123/204 (60%), Gaps = 4/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++ +GY AVQVG K+ +K Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKTVETDGYEAVQVGFQTKTEKHTNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 G F + V+P++ L EF+ + + +G + F VDV G + GKGF G Sbjct: 63 AEAGIFKAAGVAPQRHLVEFKGFETE--FKLGDAITVELFEADTFVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG +ATHG R+ GS G P RVFK +MAGR GG++VT++NL+V+ V Sbjct: 121 VKRHGFGGVGQATHGQHNRLRAPGSLGASSYPSRVFKGMRMAGRTGGDKVTMQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 + LIL+KG VPGA K S +++ Sbjct: 181 IPEHNLILIKGSVPGA-KGSIVII 203 >gi|310821093|ref|YP_003953451.1| 50S ribosomal protein L3 [Stigmatella aurantiaca DW4/3-1] gi|309394165|gb|ADO71624.1| 50S ribosomal protein L3 [Stigmatella aurantiaca DW4/3-1] Length = 223 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 98/221 (44%), Positives = 136/221 (61%), Gaps = 3/221 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GMT V+N EG +PVTV+ + CQVV RT +K+ Y AV +G GE + K ++ Sbjct: 2 KGLIGKKIGMTQVFNDEGNLVPVTVVDVSTCQVVGKRTPEKDQYSAVTLGFGEIREKVLN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 + RGFF + + ++ L EFRV +D VG FT GQLVDVTG T G+GFS Sbjct: 62 QAQRGFFKKNSAALRRHLKEFRVTPEDAAQFNVGDAVKADLFTKGQLVDVTGTTKGRGFS 121 Query: 122 GAMKRHNFGGLR-ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G M+R +F G + THG R G+ G R+ PGR + NKKM G G +VT +NL VV Sbjct: 122 GVMRRWSFKGSQTKTHGTHEYQRHPGAIGQRKTPGRTYPNKKMPGHYGVEQVTTQNLTVV 181 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 VD ++GL+L+KG VPG ++ + VR S K A+ + K S Sbjct: 182 DVDTEKGLLLIKGAVPG-HNDAIVYVRPSVKVALRAQHKAS 221 >gi|228470688|ref|ZP_04055539.1| 50S ribosomal protein L3 [Porphyromonas uenonis 60-3] gi|228307545|gb|EEK16541.1| 50S ribosomal protein L3 [Porphyromonas uenonis 60-3] Length = 205 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 82/204 (40%), Positives = 124/204 (60%), Gaps = 4/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EG +P TV+ + C V +T D++GY A+Q+G +AK K+ ++ Sbjct: 3 GLLGKKIGMTSVFSAEGVNVPCTVIEVGPCVVTQVKTADRDGYEAIQLGFQDAKDKHTTR 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F + V+ K+ L EF D +G + F VDV G + GKGF G Sbjct: 63 PLQGHFKAAGVTNKRHLAEFMGFGSD--YKLGDEITVELFNDTHYVDVHGTSKGKGFQGV 120 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG ++THG R+ G+ G P +VFK +MAG+MG RVTV+NLEV+ V Sbjct: 121 VKRHGFGGVGQSTHGQDDRLRAPGAVGACSYPAKVFKGTRMAGQMGNKRVTVQNLEVIKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 + ++++KG VPGA K S I + Sbjct: 181 MPEHNILVLKGSVPGA-KGSIIAI 203 >gi|108757306|ref|YP_631567.1| 50S ribosomal protein L3 [Myxococcus xanthus DK 1622] gi|123374502|sp|Q1D706|RL3_MYXXD RecName: Full=50S ribosomal protein L3 gi|108461186|gb|ABF86371.1| ribosomal protein L3 [Myxococcus xanthus DK 1622] Length = 224 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 97/221 (43%), Positives = 135/221 (61%), Gaps = 3/221 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GMT V+N EG +PVTV+ + CQVV RT +K+ Y AV +G GE + K ++ Sbjct: 2 KGLIGKKIGMTQVFNDEGNLVPVTVIDVGTCQVVGKRTPEKDNYSAVTIGFGEIREKILN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 RGFF N ++ L EFRV ++ VG F G+LVDVTG+T G+GFS Sbjct: 62 LAERGFFKKANAPYRRHLKEFRVTPEEAASFNVGDAVKADMFAKGELVDVTGITKGRGFS 121 Query: 122 GAMKRHNFGGLR-ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G M+R NF G + THG R G+ G R+ PGRV+ NKKM G G ++VT +NL VV Sbjct: 122 GVMRRWNFKGSQTKTHGTHEYQRHPGAIGQRKTPGRVYPNKKMPGHYGVDQVTTQNLTVV 181 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 VD ++GL+LVKG V G N + +R S K+A+ + K + Sbjct: 182 DVDVEKGLVLVKGAVAG-HNNGVVYIRPSIKAAMRAQHKAA 221 >gi|317485822|ref|ZP_07944686.1| 50S ribosomal protein L3 [Bilophila wadsworthia 3_1_6] gi|316922928|gb|EFV44150.1| 50S ribosomal protein L3 [Bilophila wadsworthia 3_1_6] Length = 209 Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats. Identities = 85/206 (41%), Positives = 123/206 (59%), Gaps = 2/206 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 + G++ RKLGMT ++ +G + VTV+ C V +T + +GY A+Q+ EAK K+V Sbjct: 4 KMGILGRKLGMTRIFAGDGSAVAVTVVQAGPCPVTQVKTAETDGYNALQIAFEEAKEKHV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KPM+G F+ + +K+ E R+ VG+V + F G + VTG ++GKG+ Sbjct: 64 TKPMKGHFAKAGTALYRKVREIRLDGPAA-YEVGAVLTADVFAAGDKIKVTGTSLGKGYQ 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G M+R NF G + THG HRS GS G PG VFK +KMAG G +VTV+ LE+V Sbjct: 123 GVMRRWNFKGSKDTHGCEKVHRSGGSIGNNTFPGHVFKGRKMAGHWGAEQVTVQGLEIVD 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V + +IL++G VPG KN +LVR Sbjct: 183 VRTEDNVILIRGSVPGP-KNGLVLVR 207 >gi|302379782|ref|ZP_07268266.1| 50S ribosomal protein L3 [Finegoldia magna ACS-171-V-Col3] gi|302312370|gb|EFK94367.1| 50S ribosomal protein L3 [Finegoldia magna ACS-171-V-Col3] Length = 209 Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats. Identities = 90/208 (43%), Positives = 128/208 (61%), Gaps = 3/208 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT ++N +G +PVTV+ V +T +K GY A+QVG E K K+V++P Sbjct: 4 ILGKKIGMTQIFNEDGSVVPVTVIEAGPMVVTQIKTKEKEGYNAIQVGYIEKKEKHVNQP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 MRG F VS KK L EF++ DD+ +G F G +VDV G++ GKG GA+ Sbjct: 64 MRGHFGKAGVSFKKHLREFKI-NDDEQFNLGDEIKLDIFQDGDVVDVIGISKGKGTQGAI 122 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 RHN+ HG S SHR G+ P RVFK +K G+MG +RVTV+NL++V VD+ Sbjct: 123 VRHNYSRGPMGHG-SKSHRVAGARSAGSYPARVFKGRKGFGKMGHDRVTVQNLKIVKVDN 181 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPG K + VR++ KS Sbjct: 182 ERNLLLIKGAVPG-NKGGVVTVREAIKS 208 >gi|167752385|ref|ZP_02424512.1| hypothetical protein ALIPUT_00629 [Alistipes putredinis DSM 17216] gi|167660626|gb|EDS04756.1| hypothetical protein ALIPUT_00629 [Alistipes putredinis DSM 17216] Length = 204 Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats. Identities = 83/205 (40%), Positives = 120/205 (58%), Gaps = 5/205 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT VY+ EG+ IP TV+ C V RT++K+ Y AVQ+ + K+ + Sbjct: 2 SGLIGKKIGMTSVYSAEGKNIPCTVIEAGPCVVTQIRTVEKDSYEAVQIAYDDKSEKHTT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 + G F +PK+K+ EF KD + +G + F+ VDVTG++ GKGF G Sbjct: 62 GSLLGHFKKAGTTPKRKMAEF---KDMPEVNLGDTLTVDMFSEEDWVDVTGISKGKGFQG 118 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG THG R GS G P RVF K++ GRMGG +V V NL+V+ Sbjct: 119 VVKRHGFGGVGGQTHGQHNRQRKPGSLGASSYPSRVFPGKRLPGRMGGEQVKVLNLKVLK 178 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 + + LILVKG +PGA K +++ + Sbjct: 179 IIPENNLILVKGSIPGA-KGAYLTI 202 >gi|148268690|ref|YP_001247633.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus JH9] gi|189029484|sp|A5IV34|RL3_STAA9 RecName: Full=50S ribosomal protein L3 gi|147741759|gb|ABQ50057.1| LSU ribosomal protein L3P [Staphylococcus aureus subsp. aureus JH9] Length = 220 Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats. Identities = 93/221 (42%), Positives = 122/221 (55%), Gaps = 11/221 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+QVG Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYK 60 Query: 54 -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 K +KP G + +PK+ + EFR D D VG S F G ++DVT Sbjct: 61 KDAKSNKYANKPAEGHAKKADAAPKRFIREFR-NVDVDAYEVGQEVSVDTFVAGDVIDVT 119 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ GKGF GA+KRH +H S HR+ S G D RVFK +KM GRMGGN V Sbjct: 120 GVSKGKGFQGAIKRHGQSRGPMSH-SSHFHRAPDSVGMASDASRVFKGQKMPGRMGGNTV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 TV+NLEVV VD + +ILVKG VPG KK + +R S K Sbjct: 179 TVQNLEVVQVDTENKVILVKGNVPGPKKG-LVEIRTSIKKG 218 >gi|262277094|ref|ZP_06054887.1| 50S ribosomal protein L3 [alpha proteobacterium HIMB114] gi|262224197|gb|EEY74656.1| 50S ribosomal protein L3 [alpha proteobacterium HIMB114] Length = 260 Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats. Identities = 104/212 (49%), Positives = 139/212 (65%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V +KLGMT + G +PVTVL ++ +VV +K GY AV VG G K Sbjct: 1 MAIGLVGKKLGMTQRFFENGESLPVTVLKIEKAKVVDVINKEKRGYSAVLVGYGHIKNSK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++K M+GFF+ + PKK L EFR++ +L P G+ + + VDV TIGKGF Sbjct: 61 LTKQMKGFFAKKSQEPKKILKEFRLENTKELKP-GTEINLDVLKDKKYVDVRAKTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G+MKRHNFGG+RATHGVSISHR+HGSTG QDPG+VFK KKMAG MG T LEVV Sbjct: 120 AGSMKRHNFGGMRATHGVSISHRAHGSTGQCQDPGKVFKGKKMAGHMGAKYRTTLGLEVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D + L+ +KG VPG+ KNS++ ++++ K+ Sbjct: 180 EADLENNLLYLKGAVPGS-KNSYVEIQEAIKN 210 >gi|217077283|ref|YP_002335001.1| ribosomal protein L3 [Thermosipho africanus TCF52B] gi|226730580|sp|B7IHU6|RL3_THEAB RecName: Full=50S ribosomal protein L3 gi|217037138|gb|ACJ75660.1| ribosomal protein L3 [Thermosipho africanus TCF52B] Length = 205 Score = 240 bits (614), Expect = 7e-62, Method: Composition-based stats. Identities = 87/208 (41%), Positives = 123/208 (59%), Gaps = 6/208 (2%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RK+GMT ++ + + IPVTV+ C VV +T+D +GY A+Q+G EAK V+KP Sbjct: 4 IIGRKVGMTRIF-KDDKVIPVTVIKAGPCYVVQKKTIDTDGYNAIQIGFEEAK--KVNKP 60 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M G F V P K L EFRV+ ++ +G F G +D+TG + G+GF+GAM Sbjct: 61 MEGVFKKAGVKPLKILKEFRVENPEEF-ELGQEIKVDIFAEGDKIDITGWSKGRGFAGAM 119 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR F G +HG HR GS G +P R+FK KKM G+ G RVT+ N E+V +D Sbjct: 120 KRWGFRGGPKSHGA-KFHRELGSVGQHSEPARIFKGKKMPGQYGNERVTILNSEIVKIDV 178 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212 + LI VKG VPGA + +L+R + + Sbjct: 179 ENNLIAVKGGVPGA-RGGLVLIRTAKRG 205 >gi|255530514|ref|YP_003090886.1| 50S ribosomal protein L3 [Pedobacter heparinus DSM 2366] gi|255343498|gb|ACU02824.1| ribosomal protein L3 [Pedobacter heparinus DSM 2366] Length = 205 Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats. Identities = 87/205 (42%), Positives = 130/205 (63%), Gaps = 4/205 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ +G+ IP TV+ C V +T +K+GY++VQ+ EAK KN + Sbjct: 2 SGIIGKKVGMTSIFDADGKNIPCTVIEAGPCVVTQVKTEEKDGYVSVQLSFDEAKEKNTT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G F+ +PK+KL EF + ++ L +G + + F G VDV G + GKGF G Sbjct: 62 MPLKGHFAKAKTTPKRKLVEF--EPFEESLNLGDTVTVNIFNEGDFVDVVGTSKGKGFQG 119 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG THG R+ GS G P RVFK +MAGRMGG+RV V+NL+V+ Sbjct: 120 VVKRHGFGGVGGQTHGQHNRMRAPGSLGAASYPSRVFKGMRMAGRMGGDRVKVQNLQVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 V + L++V G VPGA K S++++ Sbjct: 180 VYADQNLVVVSGSVPGA-KGSYVIL 203 >gi|282891949|ref|ZP_06300428.1| hypothetical protein pah_c200o113 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498209|gb|EFB40549.1| hypothetical protein pah_c200o113 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 220 Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats. Identities = 83/219 (37%), Positives = 122/219 (55%), Gaps = 10/219 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK- 59 M ++ +K GMT ++ G I TV+ ++ V +T +K+GY AVQ+G + + Sbjct: 1 MAIKLMGKKRGMTQRFDEAGNLIVCTVIEVEPNVVTQLKTKEKDGYNAVQLGFEKIEAND 60 Query: 60 ------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113 SKP++G ++ V P++ EFR+ +D +G F +DV G Sbjct: 61 PRTVKRRTSKPLQGHYAKAGVEPRRFSGEFRI-EDSAEFSLGQELKVDLFKEAGYLDVIG 119 Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 ++ GKG+ G MK HNFGG A HG S HR GSTG R PGR K A MG +RVT Sbjct: 120 VSKGKGYQGVMKLHNFGGGPAAHG-SGFHRHAGSTGMRSTPGRCLPGGKRASHMGVDRVT 178 Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V+NL++V VD++ LILV+G VPGA +S + +R++ K Sbjct: 179 VENLKIVLVDEENNLILVQGQVPGAY-DSLLFLREARKK 216 >gi|124003662|ref|ZP_01688510.1| ribosomal protein L3 [Microscilla marina ATCC 23134] gi|123990717|gb|EAY30184.1| ribosomal protein L3 [Microscilla marina ATCC 23134] Length = 208 Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats. Identities = 90/209 (43%), Positives = 125/209 (59%), Gaps = 9/209 (4%) Query: 3 SGVVARKLGMTCVYNIEG---RRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 SG++ +K+GMT +Y+ EG ++IP T++ C V +T +GY A+QVG + K K Sbjct: 2 SGLIGKKIGMTSIYSAEGTVAKQIPCTLIQAGPCVVTQVKTTKNDGYEAIQVGFDDKKEK 61 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGK 118 N KP++G F+ N +PK+KL EF+ KD + +G + F G VDV G + GK Sbjct: 62 NTPKPLQGHFNKANTTPKRKLVEFQFNKD---VELGQEITVGDVFEEGDFVDVVGTSKGK 118 Query: 119 GFSGAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 GF G +KRH F G ATHG R GS G P RVFK KMAGR G RV ++NL Sbjct: 119 GFQGVVKRHGFHGVGGATHGQHNRQRHPGSIGAASYPARVFKGLKMAGRTGNKRVKIQNL 178 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILV 206 +V + ++ LILV G VPGA KNS++++ Sbjct: 179 RIVKIYPEQNLILVSGSVPGA-KNSYVII 206 >gi|330850884|ref|YP_004376634.1| 50S ribosomal protein L3 [Fistulifera sp. JPCC DA0580] gi|328835704|dbj|BAK19000.1| 50S ribosomal protein L3 [Fistulifera sp. JPCC DA0580] Length = 207 Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats. Identities = 78/206 (37%), Positives = 124/206 (60%), Gaps = 2/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT +++ G IPVT+L + C V +T K+GY ++QVG G K Sbjct: 1 MSVGLLGNKIGMTQIFDESGNIIPVTILKVGPCVVTQVKTKSKDGYDSIQVGYGNVSPKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G ++ P + L EFRV ++++ +G + + F+ GQL+++ G +IGKGF Sbjct: 61 LTQPELGHLQKSDIQPLRYLKEFRVSEENE-FNLGQILDVNSFSPGQLINIQGKSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KR+NF THG S +HR+ GS G PGRV KKM+G++G T+K L+V+ Sbjct: 120 SGLQKRYNFSRGPMTHG-SKNHRAPGSIGMGTSPGRVLPGKKMSGQVGNKVTTIKKLKVI 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 V+ + ++++KG VPG N +V Sbjct: 179 QVNLEENILVIKGSVPGKPGNLLSIV 204 >gi|291280148|ref|YP_003496983.1| 50S ribosomal protein L3 [Deferribacter desulfuricans SSM1] gi|290754850|dbj|BAI81227.1| 50S ribosomal protein L3 [Deferribacter desulfuricans SSM1] Length = 214 Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats. Identities = 99/217 (45%), Positives = 127/217 (58%), Gaps = 4/217 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEA-KVK 59 M SG++ +K+GMT V+ EG IPVTVL + C VV + +K+GY A+Q+G + K+K Sbjct: 1 MLSGLLGKKIGMTQVFTSEGLVIPVTVLQVGPCVVVQKKVKEKDGYNALQIGFEKVTKLK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KPM G F NV P K L E +V D+ G + F G VDV G++ GKG Sbjct: 61 KVNKPMLGHFKKHNVEPLKYLKEVKVDNPDEFNE-GQEITVEIFNEGDFVDVQGISKGKG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKRH F G A+HG S HR+ GS G + PG K +KM GRMGG +VTV LEV Sbjct: 120 FQGVMKRHGFAGGPASHG-SNFHRAPGSVGMCEFPGETPKGRKMPGRMGGEKVTVMGLEV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 V V + L+LVKG VPG NS + VR + K Sbjct: 179 VKVIPDKNLVLVKGAVPG-HNNSLVYVRKAVKVRKRA 214 >gi|297625782|ref|YP_003687545.1| 50S ribosomal protein L3 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921547|emb|CBL56101.1| 50S ribosomal protein L3 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 224 Score = 240 bits (614), Expect = 9e-62, Method: Composition-based stats. Identities = 94/211 (44%), Positives = 124/211 (58%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT +++ R +PVTV+ C V RT D +GY AVQ+G G + K+V+ Sbjct: 13 KGLLGTKLGMTQLWDENNRLVPVTVIQAGPCVVTQVRTPDTDGYSAVQLGYGAIRAKSVT 72 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V+P+K L E R D +G P F +VDVTG+T GKG +G Sbjct: 73 KPAAGQFARAKVTPRKYLAEIRTS-DASEYTLGQELGPDTFRTDDVVDVTGVTKGKGTAG 131 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR F GL A+HGV HRS G G PG VFK +MAGRMG R TV+NL V V Sbjct: 132 VVKRWGFKGLGASHGVHRKHRSPGGIGACATPGHVFKGLRMAGRMGNARKTVQNLAVAGV 191 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D +GLILV+G VPG K + +++R + K Sbjct: 192 DADKGLILVRGAVPG-NKGALVVLRTAAKKG 221 >gi|52840574|ref|YP_094373.1| 50S ribosomal protein L3 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54296365|ref|YP_122734.1| 50S ribosomal protein L3 [Legionella pneumophila str. Paris] gi|148361053|ref|YP_001252260.1| 50S ribosomal protein L3 [Legionella pneumophila str. Corby] gi|81822648|sp|Q5X859|RL3_LEGPA RecName: Full=50S ribosomal protein L3 gi|81823474|sp|Q5ZYP3|RL3_LEGPH RecName: Full=50S ribosomal protein L3 gi|166233152|sp|A5IHR4|RL3_LEGPC RecName: Full=50S ribosomal protein L3 gi|52627685|gb|AAU26426.1| 50S ribosomal protein L3 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750150|emb|CAH11542.1| 50S ribosomal subunit protein L3 [Legionella pneumophila str. Paris] gi|148282826|gb|ABQ56914.1| 50S ribosomal protein L3 [Legionella pneumophila str. Corby] Length = 216 Score = 240 bits (614), Expect = 9e-62, Method: Composition-based stats. Identities = 93/217 (42%), Positives = 129/217 (59%), Gaps = 1/217 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ EG +PV+V+ + +V +T +GY AVQ+ G K Sbjct: 1 MMIGLLGRKIGMTRVFTPEGVSVPVSVVEVQPNRVSQVKTAANDGYSAVQLTGGTKKSSK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKP+ G F+ + EFR+ +D P + FT GQ VDV+G+T GKGF Sbjct: 61 VSKPVAGHFAKAQIDAGDMQVEFRIDSEDAFTPGQVISVADVFTAGQYVDVSGLTKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNF A+HG S SHR GS G Q PGRVFK KKMAG MG R T+++LE+V Sbjct: 121 AGTVKRHNFRTQDASHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNARCTIQSLELV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 VD +R L+L+KG +PGA S + ++ + K + Sbjct: 181 KVDSERNLLLIKGAIPGAP-GSRVEIKPAVKKQARGE 216 >gi|320335523|ref|YP_004172234.1| 50S ribosomal protein L3 [Deinococcus maricopensis DSM 21211] gi|319756812|gb|ADV68569.1| 50S ribosomal protein L3 [Deinococcus maricopensis DSM 21211] Length = 206 Score = 240 bits (613), Expect = 9e-62, Method: Composition-based stats. Identities = 90/210 (42%), Positives = 119/210 (56%), Gaps = 7/210 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ K+GMT V+ + + IPVTV+ C VV +T +GY AVQVG K ++ Sbjct: 2 KGILGTKVGMTQVW-KDDKVIPVTVVLAGPCPVVQRKTTATDGYEAVQVGFMPKNEKRIN 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 +P+ G VS + L EFR + P G + F G+ +D TG + GKG G Sbjct: 61 RPLMGHLKKAGVSGVRYLREFR-----NFTPEGDTITVDIFGAGEKIDATGTSKGKGTQG 115 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKR NF G A+HG HR GS G R+ PGRV+K K+MAGRMG RVTV+NLEVV V Sbjct: 116 VMKRWNFKGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGRMGNERVTVQNLEVVEV 175 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 LILVKG +PGA +++R + K Sbjct: 176 RAGENLILVKGAIPGAN-GGLVVLRQAVKG 204 >gi|206602675|gb|EDZ39156.1| Ribosomal protein L3 [Leptospirillum sp. Group II '5-way CG'] Length = 207 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 78/210 (37%), Positives = 128/210 (60%), Gaps = 4/210 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M++ ++ RKLGMT +Y G+ +PVT++ C+++ +T +K GY A Q+G K+ Sbjct: 1 MKT-LLGRKLGMTQIYLPSGQAVPVTIVEAGPCEILQVKTSEKEGYSAAQIGYFPISPKH 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP RG + + + EF+V++ + GS+ + F G +D+TG + GKGF Sbjct: 60 LNKPERGHQQKYAKNLYRYVREFKVEE--NTQSPGSILTVEIFQEGDSLDITGQSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRH+F G ATHG S+ HR GS G P RV KNKK+ G MG R+TVKNL+++ Sbjct: 118 AGVMKRHHFRGGDATHG-SMFHREPGSIGSSAYPSRVLKNKKLPGHMGDKRITVKNLKLI 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 +V + L+ +KG +PG+ + ++ +++ Sbjct: 177 AVKPEANLLFIKGAIPGSNGSFVVVNKNTI 206 >gi|158520725|ref|YP_001528595.1| ribosomal protein L3 [Desulfococcus oleovorans Hxd3] gi|226725163|sp|A8ZV57|RL3_DESOH RecName: Full=50S ribosomal protein L3 gi|158509551|gb|ABW66518.1| ribosomal protein L3 [Desulfococcus oleovorans Hxd3] Length = 208 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 78/207 (37%), Positives = 117/207 (56%), Gaps = 3/207 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V++ +G +PVTV+ C V +T++ +GY A+Q+G E K Sbjct: 1 MCRGIIGRKIGMTGVFSDQGEYVPVTVIEAGPCVVTQIKTVETDGYSALQLGFLEKKASK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+ G F + E V D +G V + F+ G+ V V G+ G+GF Sbjct: 61 INKPLAGHFKKSGGVGFAYVREMAVD-DPSAYTLGQVINAELFSAGEKVHVAGLMKGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH F G + THG SHR GS G P +VFK +K+ GR G R+T KNL++ Sbjct: 120 AGVVKRHGFAGGKDTHGCH-SHRVPGSIGTSAWPSKVFKGRKLPGRYGNTRITTKNLKIF 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207 + + LIL+KG VPG+ N + +R Sbjct: 179 DIQPETNLILIKGAVPGSN-NGLVEIR 204 >gi|145219061|ref|YP_001129770.1| 50S ribosomal protein L3 [Prosthecochloris vibrioformis DSM 265] gi|189042857|sp|A4SCQ9|RL3_PROVI RecName: Full=50S ribosomal protein L3 gi|145205225|gb|ABP36268.1| LSU ribosomal protein L3P [Chlorobium phaeovibrioides DSM 265] Length = 209 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 85/207 (41%), Positives = 121/207 (58%), Gaps = 1/207 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT +YN + +P T++ C V ++ +GY A QVG GE K V+KP Sbjct: 4 ILGKKIGMTRLYNEKREAVPCTIIQAGPCFVTQVKSAGIDGYDAYQVGIGERKEAKVTKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M G + V+P EF D L GS FT G++V V G++ GKGF+G + Sbjct: 64 MLGHYKKAGVAPGYMTAEFDTSMFDGELTAGSPVLVESFTEGEIVKVQGVSKGKGFAGVV 123 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHNFGG + THG S R+ GS G DP + FK KM GRMG + +TV+NL+V+ + Sbjct: 124 KRHNFGGGQRTHGQSDRLRAPGSIGGASDPSKTFKGTKMGGRMGSDTITVRNLQVIKIMP 183 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211 + LI+VKG VPG KNS++ + + K Sbjct: 184 ESSLIMVKGSVPGP-KNSYVRIVSTKK 209 >gi|50309329|ref|XP_454671.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49643806|emb|CAG99758.1| KLLA0E16039p [Kluyveromyces lactis] Length = 273 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 100/214 (46%), Positives = 146/214 (68%), Gaps = 2/214 (0%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R G +++K+GM + E G+RI TVL LDN +V++HRT +N Y A Q+G G + Sbjct: 58 LRCGALSKKVGMMPYFEKETGKRIAATVLQLDNNEVILHRTPAENNYWACQIGYGNKSPE 117 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV++ M G F++ V+PK+K+ EFRV+ + LLPVGS+ PS+F GQ VD+ ++ GKG Sbjct: 118 NVTRQMLGHFAAHVVNPKEKVTEFRVKDESGLLPVGSLIKPSWFKPGQYVDLRSISKGKG 177 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR+ F GL+A+HGVS+SHRS GS G Q PGRV KKM G MG + VT++N++V Sbjct: 178 FQGVMKRYGFKGLKASHGVSVSHRSGGSYGQNQTPGRVLPGKKMPGHMGVDTVTIQNVQV 237 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + V+D+ G +LVKG V G +++ ++D+ K Sbjct: 238 LDVNDETGTVLVKGSVAGPN-GAFVKIQDAIKKP 270 >gi|327402783|ref|YP_004343621.1| 50S ribosomal protein L3P [Fluviicola taffensis DSM 16823] gi|327318291|gb|AEA42783.1| LSU ribosomal protein L3P [Fluviicola taffensis DSM 16823] Length = 204 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 90/205 (43%), Positives = 125/205 (60%), Gaps = 5/205 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT VY+ EG+ P TV+ C V +T D++GY A+Q+G GE + KN Sbjct: 3 GIIGKKIGMTSVYSAEGKATPCTVIEAGPCVVTQVKTQDRDGYEAIQLGFGERREKNTPN 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 ++G F N +PK KL EF K D L +G V F G+ V + G + GKGF G Sbjct: 63 ALKGHFKKANTTPKSKLVEF---KGFDGLNLGDVVDVQLFEQGEFVGIAGTSKGKGFQGV 119 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHNFGG ++THG R+ GS G P RVFK +MAG+MG RVTV+NLEV+ V Sbjct: 120 VKRHNFGGVGQSTHGQHNRLRAPGSIGACSYPARVFKGMRMAGQMGNKRVTVENLEVLRV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + LI+VKG +PG K S ++++ Sbjct: 180 LADKNLIVVKGSIPGP-KGSTVIIQ 203 >gi|112791754|gb|ABI22152.1| ribosomal protein L3 [Flavobacterium hibernum] Length = 205 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 84/206 (40%), Positives = 123/206 (59%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C V RT +GY A+Q+G + K+ + Sbjct: 2 SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTKGVDGYEALQLGFDDKNEKHST 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F KKK+ EF+ +G + S F G+ VDV G++ GKGF G Sbjct: 62 KAALGHFKKAGTVAKKKVVEFQ--DFATEQKLGDLIDVSIFAEGEFVDVQGVSKGKGFQG 119 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG +ATHG R+ GS G P RVFK +MAGRMGG+ V V+NL V+ Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGGDNVKVQNLRVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L+++KGCVPG KNS+++++ Sbjct: 180 VVAEKNLLVIKGCVPG-HKNSYVIIQ 204 >gi|313680515|ref|YP_004058254.1| LSU ribosomal protein l3p [Oceanithermus profundus DSM 14977] gi|313153230|gb|ADR37081.1| LSU ribosomal protein L3P [Oceanithermus profundus DSM 14977] Length = 208 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 7/209 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ K+GMT ++ R IPVTV+ C VV ++ +++GY AVQ+G + K V+ Sbjct: 2 KGILGAKVGMTQIW-KNDRAIPVTVVLAGPCPVVQRKSPERDGYAAVQLGFVPLEPKRVN 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KPM+G F+ + P + L E R D P G V + F G VDVTG + G+G +G Sbjct: 61 KPMKGHFAKFSAEPVRYLREIR-----DFEPEGDVVTVEIFQPGDKVDVTGTSKGRGTAG 115 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKR NF G A+HG HR GS G R+ PGRV+K KKMAG G R+TV+NLEVV V Sbjct: 116 VMKRWNFAGGPASHGAHRIHRHGGSIGQRKAPGRVYKGKKMAGHYGAERITVQNLEVVEV 175 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 + L+L+KG +PG ++VR++ + Sbjct: 176 IPEENLLLIKGAIPGPN-GGLVVVRETTR 203 >gi|320103617|ref|YP_004179208.1| 50S ribosomal protein L3P [Isosphaera pallida ATCC 43644] gi|319750899|gb|ADV62659.1| LSU ribosomal protein L3P [Isosphaera pallida ATCC 43644] Length = 212 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 83/209 (39%), Positives = 116/209 (55%), Gaps = 1/209 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT +Y +G+ +PVTVL C V+ +T + +GY AVQ+G + K K Sbjct: 1 MVVGLLGRKVGMTQIYREDGQAVPVTVLECGPCTVLQVKTPETDGYCAVQLGYLDRKRKT 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + RG + K+ Q + L +G + S F + VDVTG++ G+GF Sbjct: 61 ATAAARGHARKAGNAEPKRYIREIRQDEPPTLKLGDQLTVSVFEAIKRVDVTGVSKGRGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH F GLRATHGV HR GS+G DP R K + G G +VT NLEVV Sbjct: 121 AGVVKRHGFRGLRATHGVKRMHRHPGSSGPSADPSRTRKGIRKPGHFGHAKVTALNLEVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VD L++VKG VPG ++ VR + Sbjct: 181 KVDPDANLLVVKGAVPGPN-GGFVTVRQT 208 >gi|227494545|ref|ZP_03924861.1| ribosomal protein L3 [Actinomyces coleocanis DSM 15436] gi|226832279|gb|EEH64662.1| ribosomal protein L3 [Actinomyces coleocanis DSM 15436] Length = 221 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 95/211 (45%), Positives = 132/211 (62%), Gaps = 2/211 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 ++ RKLGMT V++ +GR +PVTV+ + V RT + +GY A Q+G GE + ++ Sbjct: 13 KALLGRKLGMTQVWDNDGRVVPVTVVQVGTNVVTQVRTEEVDGYTAAQIGFGEVDARRIT 72 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F V+P++ L E R D D +G S F G VDV+G + GKGF+G Sbjct: 73 KPLAGHFEKAGVAPRRHLVEVRTS-DVDAFELGQELLASVFEAGDKVDVSGKSKGKGFAG 131 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRH F G A+HG +HR GS G PGRVFK +MAGRMG R TV+NL++ +V Sbjct: 132 AMKRHGFRGAPASHGAHRNHRKPGSIGACATPGRVFKGVRMAGRMGNVRRTVQNLDIHAV 191 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++GL+L+ G +PG KN+ +LVR+S K A Sbjct: 192 DVEKGLLLIHGAIPGP-KNAVVLVRNSVKGA 221 >gi|295135701|ref|YP_003586377.1| 50S ribosomal protein L3 [Zunongwangia profunda SM-A87] gi|294983716|gb|ADF54181.1| 50S ribosomal protein L3 [Zunongwangia profunda SM-A87] Length = 203 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 81/206 (39%), Positives = 126/206 (61%), Gaps = 6/206 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C + RT + +GY A+Q+G + K + Sbjct: 2 SGLIGKKIGMTSIFDENGKNIPCTVIEAGPCVITQVRTNEVDGYEALQLGFDDKKTA--N 59 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G V+ ++K+ EF+ + D +G + +F G+ VD++G + GKGF G Sbjct: 60 KAATGHAKKAGVAAQRKVVEFQGFEGD--YKLGDTINVEHFKEGEFVDISGTSKGKGFQG 117 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG ++THG R+ GS G P RVFK +MAGRMGG +V V+NL V+ Sbjct: 118 VVKRHGFGGVGQSTHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGEKVKVENLRVLK 177 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L++VKGCVPG KNS++++R Sbjct: 178 VVAEKNLLVVKGCVPG-HKNSYVIIR 202 >gi|196003476|ref|XP_002111605.1| hypothetical protein TRIADDRAFT_3973 [Trichoplax adhaerens] gi|190585504|gb|EDV25572.1| hypothetical protein TRIADDRAFT_3973 [Trichoplax adhaerens] Length = 250 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 92/210 (43%), Positives = 136/210 (64%), Gaps = 3/210 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEA-KVKN 60 R+G++ KLGM ++ +G R+PVT++ + C V+ ++T K+GY AVQVGA + K+ Sbjct: 14 RTGLIGVKLGMMPMWMKDGTRVPVTLIKIQQCHVLHNKTKAKDGYCAVQVGAVDRLKLLY 73 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V + G F+ V+PK+K++EF+V DD L+ G++ +F GQ VDV TIGKGF Sbjct: 74 VRRAQLGHFARAGVNPKRKVWEFKVS-DDALILRGTLLHAMHFVPGQYVDVKAKTIGKGF 132 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G MK+H G ATHGVS++HR G+TG Q+PGR++ KKMAGRMG T KNL ++ Sbjct: 133 QGVMKKHGMKGQPATHGVSLTHRKMGATGGGQEPGRIWPGKKMAGRMGNKYHTTKNLRIL 192 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 ++ K ++ VKG VPG +N +I + D+ Sbjct: 193 RINTKYDILYVKGAVPG-HENQFIRITDAI 221 >gi|284929561|ref|YP_003422083.1| 50S ribosomal protein L3P [cyanobacterium UCYN-A] gi|284810005|gb|ADB95702.1| LSU ribosomal protein L3P [cyanobacterium UCYN-A] Length = 212 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 85/210 (40%), Positives = 120/210 (57%), Gaps = 4/210 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT +++ G IPVTV+ + C + +T D +GY A+Q+G E K K Sbjct: 1 MAIGLLGTKLGMTQIFDDETGAAIPVTVMKVGPCTITQIKTSDTDGYNAIQIGYSEVKEK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + KP G SP + L E+RV D +G + F G LVDVTG ++G+G Sbjct: 61 ALVKPELGHLKKAGASPLRHLKEYRVD-DIQPYQLGETVNVDLFNTGDLVDVTGTSMGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G KRHNF THG S SHR GSTG PGRV+ KKMAG+ G ++VT + L+V Sbjct: 120 FAGYQKRHNFKRGNMTHG-SKSHRLPGSTGAGTTPGRVYPGKKMAGQYGASKVTTRRLKV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 V +D + L+L+KG +PG + + + Sbjct: 179 VQIDAECNLLLIKGAIPGKP-GGLLNITPA 207 >gi|229496170|ref|ZP_04389890.1| 50S ribosomal protein L3 [Porphyromonas endodontalis ATCC 35406] gi|229316748|gb|EEN82661.1| 50S ribosomal protein L3 [Porphyromonas endodontalis ATCC 35406] Length = 205 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 79/204 (38%), Positives = 115/204 (56%), Gaps = 4/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G P TV+ L C V +T + +GY A+Q+G E K+ +K Sbjct: 3 GLLGKKIGMTSVFSADGVNTPCTVIELGPCVVTQVKTSEHDGYDALQLGFQETTEKHATK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+P + L EF+ D +G F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVAPMRHLAEFKGFSGD--YKLGDTIKVDIFENVVYVDVIGTSKGKGFQGV 120 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 + RH FGG ++THG R+ G+ G P +VFK +MAG+ G RVTV+NLEV+ V Sbjct: 121 VGRHGFGGVGQSTHGQHNRLRAPGAVGACSYPAKVFKGTRMAGQTGNERVTVQNLEVIKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 + L+L+KG +PG K S + V Sbjct: 181 MPEHNLLLIKGSIPG-HKGSIVAV 203 >gi|224542238|ref|ZP_03682777.1| hypothetical protein CATMIT_01413 [Catenibacterium mitsuokai DSM 15897] gi|224524780|gb|EEF93885.1| hypothetical protein CATMIT_01413 [Catenibacterium mitsuokai DSM 15897] Length = 227 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 84/219 (38%), Positives = 125/219 (57%), Gaps = 8/219 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+ +G+ IPVTV+ V+ +T++ +GY A+QVG + + K + Sbjct: 2 KGILGRKIGMTQVFATDGKLIPVTVIEATPNVVLQKKTVETDGYNAIQVGFEDKREKLAN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP +G + N +PK+ + EFR + VG S F G++VDVTG + GKG+ G Sbjct: 62 KPEKGVVAKANTAPKRFIKEFRFDEMMS-YEVGQTVSVDSFVAGEVVDVTGTSKGKGYQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH HG S +HR GS G P R+ K + G+MGGN TV+NLE+V+V Sbjct: 121 VIKRHGQHIGPKGHG-SGAHRIVGSMGPIA-PNRIAPGKNLPGQMGGNTRTVQNLEIVAV 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 D ++ ++LV G VPG KK + KS + GK + Sbjct: 179 DVEKNVLLVSGSVPGPKKGLVV-----VKSGIKANGKTN 212 >gi|193214800|ref|YP_001995999.1| 50S ribosomal protein L3 [Chloroherpeton thalassium ATCC 35110] gi|226725149|sp|B3QY24|RL3_CHLT3 RecName: Full=50S ribosomal protein L3 gi|193088277|gb|ACF13552.1| ribosomal protein L3 [Chloroherpeton thalassium ATCC 35110] Length = 208 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 80/208 (38%), Positives = 118/208 (56%), Gaps = 1/208 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 S ++ +K+GMT +++ + IP TV+ C V +T+DK+GY A Q+ + K + Sbjct: 2 SAILGKKIGMTSLFDENRKAIPCTVIEAGPCFVSQVKTVDKDGYAAYQICFDKKKENRTA 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V P K+ EFR + D L G S F G V V+G++ GKGF+G Sbjct: 62 KPQLGHFQKSGVEPSYKMSEFRKEIFADELNAGDEVKVSIFKEGDTVKVSGVSKGKGFAG 121 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR++FGG THG S R+ GS G P R FK ++MAGR G + VT++ L+VV V Sbjct: 122 VVKRYHFGGGSKTHGQSDRLRAPGSVGGSSFPSRTFKGQRMAGRKGSDSVTIRGLKVVKV 181 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSF 210 + L+++KG VPG NS++ + S Sbjct: 182 LPESNLLVIKGAVPGPN-NSYLEIVTSK 208 >gi|124514443|gb|EAY55956.1| ribosomal protein L3 [Leptospirillum rubarum] Length = 207 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 77/206 (37%), Positives = 125/206 (60%), Gaps = 3/206 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RKLGMT +Y G+ +PVT++ C+V+ +T +K GY A Q+G K+++KP Sbjct: 4 LLGRKLGMTQIYLPSGQAVPVTIVEAGPCEVLQVKTSEKEGYSAAQIGYFPVSPKHLNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 RG + + + EF+V+++ G++ + F G +D+TG + GKGF+G M Sbjct: 64 ERGHQQKYAKNLYRYVREFKVEENTQA--PGNILTVEIFQEGDSLDITGQSKGKGFAGVM 121 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH+F G ATHG S+ HR GS G P RV KNKK+ G MG R+TVKNL++++V Sbjct: 122 KRHHFRGGDATHG-SMFHREPGSIGSSAYPSRVLKNKKLPGHMGDKRITVKNLKLIAVKP 180 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSF 210 + L+ +KG +PG+ + ++ +++ Sbjct: 181 EANLLFIKGAIPGSNGSFVVVNKNTI 206 >gi|15644248|ref|NP_229300.1| 50S ribosomal protein L3 [Thermotoga maritima MSB8] gi|148270422|ref|YP_001244882.1| 50S ribosomal protein L3 [Thermotoga petrophila RKU-1] gi|170289183|ref|YP_001739421.1| ribosomal protein L3 [Thermotoga sp. RQ2] gi|281412729|ref|YP_003346808.1| 50S ribosomal protein L3 [Thermotoga naphthophila RKU-10] gi|585886|sp|P38515|RL3_THEMA RecName: Full=50S ribosomal protein L3 gi|166234605|sp|A5IM83|RL3_THEP1 RecName: Full=50S ribosomal protein L3 gi|226730584|sp|B1LBP0|RL3_THESQ RecName: Full=50S ribosomal protein L3 gi|4982064|gb|AAD36566.1|AE001798_31 ribosomal protein L3 [Thermotoga maritima MSB8] gi|437923|emb|CAA79777.1| ribosomal protein L3 [Thermotoga maritima] gi|147735966|gb|ABQ47306.1| LSU ribosomal protein L3P [Thermotoga petrophila RKU-1] gi|170176686|gb|ACB09738.1| ribosomal protein L3 [Thermotoga sp. RQ2] gi|281373832|gb|ADA67394.1| 50S ribosomal protein L3 [Thermotoga naphthophila RKU-10] Length = 207 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 93/206 (45%), Positives = 128/206 (62%), Gaps = 6/206 (2%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RK+GMT V+ + +PVTV+ C VV +T++K+GY AVQ+G +AK V+KP Sbjct: 4 IIGRKIGMTRVF-VGNDSVPVTVIKAGPCVVVQKKTVEKDGYNAVQLGFEKAK--KVNKP 60 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + G F V P K L EFRV+ D+ P G V F G+ VDVTG T G+GF+GAM Sbjct: 61 LAGHFKKFGVEPMKILREFRVENPDEYEP-GQVIKVDVFEKGEYVDVTGWTKGRGFAGAM 119 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR F G +HG S HR GS G +P +++K KKM GR G RVTV+NL+VV +D Sbjct: 120 KRWGFSGGPKSHG-SKFHRELGSVGQHTEPAKIWKGKKMPGRYGNERVTVRNLQVVDIDP 178 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSF 210 + L++VKG VPGA + +L+R + Sbjct: 179 ENDLLVVKGGVPGA-RGGLVLIRSAK 203 >gi|170017943|ref|YP_001728862.1| ribosomal protein L3 [Leuconostoc citreum KM20] gi|226730530|sp|B1MW14|RL3_LEUCK RecName: Full=50S ribosomal protein L3 gi|169804800|gb|ACA83418.1| Ribosomal protein L3 [Leuconostoc citreum KM20] Length = 227 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 79/219 (36%), Positives = 115/219 (52%), Gaps = 8/219 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G I VT + V+ + + +GY A+Q+G + + Sbjct: 1 MTKGILGRKVGMTQVFTESGELIAVTAVEATPNVVLQVKNIATDGYNAIQLGYQDKRTVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G S N +PK+ + E V+ + G F G VDVTG+T G GF Sbjct: 61 SNKPEQGHASKANTTPKRYVRE--VRDAEGEFNAGDEIKVDTFQAGDYVDVTGITKGHGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+K+ HG S HR GS G RVFK K + GRMG N+ T++N+ +V Sbjct: 119 QGAIKKLGQSRGPMAHG-SRYHRRPGSMGAI--INRVFKGKLLPGRMGNNKRTMQNVAIV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 VD + L+L+KG VPGA K S + ++ + K VN K Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTIKSTVK--VNAKHP 211 >gi|33863999|ref|NP_895559.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9313] gi|42559599|sp|Q7V542|RL3_PROMM RecName: Full=50S ribosomal protein L3 gi|33635583|emb|CAE21907.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9313] Length = 218 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 127/211 (60%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ +GR IPVT++ C++ +T + +GY AVQ+G G+ + K Sbjct: 1 MSIGILGKKLGMSQFFDDQGRAIPVTLIEAGPCRITQLKTSEIDGYAAVQIGFGDTREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + K L E+RV+ + L +G+ + F GQ VDV+G T+G+GF Sbjct: 61 INKPSKGHLTKSGEVLLKHLREYRVEGLEG-LELGAAITVGSFEAGQKVDVSGDTMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F +HG S +HR GSTG PGR++ K+MAGR GG + T + L ++ Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKRTTRGLTIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD R L++VKG VPG + + +R + + Sbjct: 179 KVDSNRNLLVVKGSVPGKP-GALLNIRPAKR 208 >gi|220928207|ref|YP_002505116.1| 50S ribosomal protein L3 [Clostridium cellulolyticum H10] gi|254803665|sp|B8I7X9|RL3_CLOCE RecName: Full=50S ribosomal protein L3 gi|219998535|gb|ACL75136.1| ribosomal protein L3 [Clostridium cellulolyticum H10] Length = 212 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 87/214 (40%), Positives = 126/214 (58%), Gaps = 4/214 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++ +K+GMT +++ G IPVTV+ VV +T++ +GY A++VG + K Sbjct: 1 MKKAMLGKKIGMTQIFDENGLVIPVTVVEAGPLTVVQKKTVETDGYDAIKVGYVKVAEKK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119 +SKP G FS ++P K L EFR+ +D VG F G +DV+G++ GKG Sbjct: 61 LSKPNLGQFSKTKLAPMKHLKEFRL-EDISGFEVGQEIKAENMFQSGDKIDVSGVSKGKG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G KR+ THG S+ HR GS G +PGRVFK KK+ G MG +TV+NLEV Sbjct: 120 FQGVTKRYGQRTGPNTHG-SMYHRRIGSMGSGTNPGRVFKGKKLPGHMGRETITVQNLEV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V VD R LIL+KG +PG K ++++++ KS Sbjct: 179 VRVDSDRNLILIKGAIPGP-KGGLLVIKNTVKSG 211 >gi|297588191|ref|ZP_06946835.1| 50S ribosomal protein L3 [Finegoldia magna ATCC 53516] gi|297574880|gb|EFH93600.1| 50S ribosomal protein L3 [Finegoldia magna ATCC 53516] Length = 209 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 89/208 (42%), Positives = 128/208 (61%), Gaps = 3/208 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT ++N +G +PVTV+ V +T +K GY A+QVG E K K+V++P Sbjct: 4 ILGKKIGMTQIFNEDGSVVPVTVIEAGPMVVTQIKTKEKEGYNAIQVGYIEKKEKHVNQP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 MRG F VS KK L EF++ DD +G F G +VDV G++ GKG G++ Sbjct: 64 MRGHFGKAGVSFKKHLQEFKI-GDDQQFNLGDEIKLDIFQDGDVVDVIGISKGKGTQGSI 122 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 RHN+ HG S SHR G+ P RVFK +K +G+MG +RVTV+NL++V VD+ Sbjct: 123 VRHNYSRGPMGHG-SKSHRVAGARSAGSYPARVFKGRKGSGKMGHDRVTVQNLKIVKVDN 181 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212 +R L+L+KG VPG K + VR++ KS Sbjct: 182 ERNLLLIKGAVPG-NKGGVVTVREAIKS 208 >gi|328768339|gb|EGF78386.1| hypothetical protein BATDEDRAFT_13292 [Batrachochytrium dendrobatidis JAM81] Length = 279 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 102/213 (47%), Positives = 133/213 (62%), Gaps = 3/213 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA-GEAKVKN 60 R+G+VA K GMT +++ G+ +PVTVL + NCQV+ R +G V+VGA + + Sbjct: 19 RTGLVALKKGMTSIFDEWGQMVPVTVLEVSNCQVIRTRFHAGSGKHMVEVGAVSQRRSYR 78 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + + F VSPKKK+ EF V D +P G S+F GQ VDV G T+GKGF Sbjct: 79 LHRAQLFHFRKYQVSPKKKITEFDVTPDAC-IPSGVRLFASHFVAGQYVDVQGKTMGKGF 137 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G MKR FGG A+HGVSISHRS GS G QDPG+V+K KKM GRMGG T +NL+V+ Sbjct: 138 QGVMKRWGFGGQPASHGVSISHRSLGSIGQCQDPGKVWKGKKMPGRMGGVNRTTQNLKVI 197 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +D++ LI VKG VPG + N ++ V DS K Sbjct: 198 KIDNQYNLIYVKGGVPGPE-NGYLRVTDSIKKG 229 >gi|160902256|ref|YP_001567837.1| ribosomal protein L3 [Petrotoga mobilis SJ95] gi|189042855|sp|A9BHA5|RL3_PETMO RecName: Full=50S ribosomal protein L3 gi|160359900|gb|ABX31514.1| ribosomal protein L3 [Petrotoga mobilis SJ95] Length = 213 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 87/210 (41%), Positives = 127/210 (60%), Gaps = 4/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GMT V+ + + IPVTV+ C VV +T++ +GY A+Q+G E + + Sbjct: 2 KGILGKKVGMTRVF-KDDKAIPVTVIKAGPCVVVQKKTVETDGYNAIQIGFEEIPERKAN 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F V P + L EFRV+ DD +G + F+ G+ +D+ G + G+G+SG Sbjct: 61 KPLMGHFKKAQVKPLRYLREFRVENVDD-YEIGQKIDVTIFSEGEKIDLIGNSKGRGYSG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKR NF G THG S HR GSTG P +VFK KKM G+ G RVT++N EVV + Sbjct: 120 VMKRWNFRGGENTHG-SKFHRGLGSTGMATFPSKVFKGKKMPGQYGNERVTIQNSEVVYI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D + LI VKG VPGA + + +R++ K+ Sbjct: 179 DVQNNLIAVKGGVPGA-RGGLVTIREAVKA 207 >gi|163783267|ref|ZP_02178260.1| elongation factor Tu [Hydrogenivirga sp. 128-5-R1-1] gi|159881375|gb|EDP74886.1| elongation factor Tu [Hydrogenivirga sp. 128-5-R1-1] Length = 236 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 96/201 (47%), Positives = 124/201 (61%), Gaps = 1/201 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GV+ RKLGMT V+ +G +PVTV+ + VV ++ +K+GY AVQVGA EAK K+ Sbjct: 1 MGIGVIGRKLGMTRVFTSDGTAVPVTVIQVPANYVVQVKSPEKDGYSAVQVGAVEAKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+ G FS NV + L EFRV D + F G LVDV G + G+GF Sbjct: 61 LTKPLMGHFSKKNVKLLRYLKEFRVDNTQDYQEGQELKLEEVFKPGDLVDVVGTSKGRGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR +FGG +HG HR+ GS G R DPGRV+K KKMAG G ++ V++L VV Sbjct: 121 AGTMKRWDFGGFPKSHG-HRYHRAVGSIGNRTDPGRVWKGKKMAGHWGAEKIRVQSLLVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKN 201 V + GLILVKG VPG K Sbjct: 180 DVIPEEGLILVKGSVPGPNKG 200 >gi|320451300|ref|YP_004203396.1| 50S ribosomal protein L3 [Thermus scotoductus SA-01] gi|320151469|gb|ADW22847.1| 50S ribosomal protein L3 [Thermus scotoductus SA-01] Length = 206 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 97/211 (45%), Positives = 124/211 (58%), Gaps = 7/211 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ K+GMT +Y + R +PVTV+ C VV RT +K+GY AVQ+G K V+ Sbjct: 2 KGILGMKVGMTRIYRED-RAVPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLPQNPKRVN 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 +PM+G F+ V P + L E R D P G V + F G+ VDVTG + G+G +G Sbjct: 61 RPMKGHFARAGVGPVRILKEIR-----DFNPEGDVVTVEIFKAGERVDVTGTSKGRGTAG 115 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKR NF G +HG HR GS G R+ PGRV+K KKMAGR G RVTV NLEVV V Sbjct: 116 VMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGRYGAERVTVMNLEVVDV 175 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + L+LVKG VPG +LVR + K A Sbjct: 176 IPEENLLLVKGAVPGPN-GGLVLVRQTKKVA 205 >gi|21674998|ref|NP_663063.1| 50S ribosomal protein L3 [Chlorobium tepidum TLS] gi|42559650|sp|Q8KAH2|RL3_CHLTE RecName: Full=50S ribosomal protein L3 gi|21648231|gb|AAM73405.1| ribosomal protein L3 [Chlorobium tepidum TLS] Length = 209 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 86/207 (41%), Positives = 117/207 (56%), Gaps = 1/207 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT +YN + +P TV+ C V ++ +K+GY A Q+G GE K VSKP Sbjct: 4 ILGKKIGMTRLYNDKREAVPCTVIQAGPCYVTQVKSTEKDGYEAYQLGFGERDEKKVSKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + G + +P L E L G+ F G V+V G+T GKGF+G + Sbjct: 64 LAGHYKKAGKNPGYILSEVSKSLIVGELEAGATVPVDVFKEGDKVNVLGVTKGKGFAGVV 123 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHNFGG THG S R+ GS G DP R FK +MAGRMGG TV+NL +V V Sbjct: 124 KRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFKGTRMAGRMGGKNKTVQNLVIVKVMP 183 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211 + LI+VKG VPG KNS++ + + K Sbjct: 184 ESNLIVVKGAVPGP-KNSYVKIVSTTK 209 >gi|159039834|ref|YP_001539087.1| ribosomal protein L3 [Salinispora arenicola CNS-205] gi|212288411|sp|A8M529|RL3_SALAI RecName: Full=50S ribosomal protein L3 gi|157918669|gb|ABW00097.1| ribosomal protein L3 [Salinispora arenicola CNS-205] Length = 219 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 93/206 (45%), Positives = 125/206 (60%), Gaps = 3/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ R +PVTV+ C V R+ K+GY AVQ+ G + V Sbjct: 6 KGILGAKLGMTQVWD-NNRVVPVTVVQAGPCVVSQVRSHQKDGYAAVQLAYGAIDPRKVK 64 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G ++ +V+P++ + E R D +G + F G VDVTG T GKG++G Sbjct: 65 KPISGHYTKADVAPRRHIVELRTT-DAAEYSLGQEVTVEQFPAGISVDVTGKTKGKGYAG 123 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F GLRA+HGV HRS GS G PGRVFK +MAGRMGG R TV+NL V +V Sbjct: 124 PMKRHGFHGLRASHGVERKHRSPGSIGGCATPGRVFKGTRMAGRMGGVRYTVQNLTVQAV 183 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRD 208 D + L+LV+G +PG K + +LVR Sbjct: 184 DTENNLLLVRGAIPGP-KGALVLVRT 208 >gi|46579714|ref|YP_010522.1| 50S ribosomal protein L3 [Desulfovibrio vulgaris str. Hildenborough] gi|120602809|ref|YP_967209.1| 50S ribosomal protein L3 [Desulfovibrio vulgaris DP4] gi|81830454|sp|Q72CI0|RL3_DESVH RecName: Full=50S ribosomal protein L3 gi|166233138|sp|A1VEB6|RL3_DESVV RecName: Full=50S ribosomal protein L3 gi|46449129|gb|AAS95781.1| ribosomal protein L3 [Desulfovibrio vulgaris str. Hildenborough] gi|120563038|gb|ABM28782.1| LSU ribosomal protein L3P [Desulfovibrio vulgaris DP4] gi|311233505|gb|ADP86359.1| 50S ribosomal protein L3 [Desulfovibrio vulgaris RCH1] Length = 209 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 85/206 (41%), Positives = 117/206 (56%), Gaps = 2/206 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 + G++ RK+G+T ++ +G + VTV+ C V +T+ +GY A+Q+ EAK K++ Sbjct: 4 KMGILGRKIGVTRIFASDGSAVAVTVIKAGPCPVTQVKTVATDGYDAIQIAFDEAKEKHL 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G + + L E R++ VGS + F G V V+G +IGKG+ Sbjct: 64 NKPEIGHLAKAGKGLFRTLREIRLEAPAA-YEVGSELDVTLFATGDRVKVSGTSIGKGYQ 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G M+R NF G + THG HRS GS G PG VFK KKMAG G VTV NLEVV Sbjct: 123 GVMRRWNFAGSKDTHGCEKVHRSGGSIGNNTFPGHVFKGKKMAGHWGNESVTVLNLEVVD 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V + +ILVKG VPG KN ++VR Sbjct: 183 VRPEDNVILVKGSVPGP-KNGLVMVR 207 >gi|323340374|ref|ZP_08080631.1| 50S ribosomal protein L3 [Lactobacillus ruminis ATCC 25644] gi|323092150|gb|EFZ34765.1| 50S ribosomal protein L3 [Lactobacillus ruminis ATCC 25644] Length = 206 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 78/210 (37%), Positives = 118/210 (56%), Gaps = 6/210 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY A+Q+G + + NV Sbjct: 3 TKGILGKKVGMTQVFTENGELVPVTVVEVGTNVVLQVKTVENDGYNAIQLGFDDQRAVNV 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP +G +PK+ + E R + D VG F G +VDVTG + G GF Sbjct: 63 NKPAKGHADKAKTAPKRFVREIRDVQGD--YKVGDEVKADLFEAGDIVDVTGTSKGHGFQ 120 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR HG S HR GS G RV K K + GRMGG RVT++NL++V Sbjct: 121 GNIKRWGQSRGPMAHG-SRYHRRPGSMGVI--INRVMKGKMLPGRMGGKRVTIQNLDIVK 177 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D + G++L+KG VPGA K S++ ++ + K Sbjct: 178 ADMENGVLLIKGNVPGANK-SYVTIKSTVK 206 >gi|11467343|ref|NP_043200.1| ribosomal protein L3 [Cyanophora paradoxa] gi|132953|sp|P15766|RK3_CYAPA RecName: Full=50S ribosomal protein L3, cyanelle gi|1016144|gb|AAA81231.1| ribosomal protein L3 [Cyanophora paradoxa] gi|13513069|emb|CAC35457.1| L3 ribosomal protein [Cyanophora paradoxa] Length = 209 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 117/211 (55%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT +++ G IPVT++ C + +T +GY A+QVG E K KN Sbjct: 1 MSIGILGTKLGMTQIFDEAGNAIPVTIIQAGPCPITQIKTTATDGYNAIQVGYRETKEKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++K G N S + L EF ++ D + V + F +V++ G +IG+GF Sbjct: 61 LTKAQLGHLQKTNNSALRVLQEFSIESSDS-IEVEKPITVELFNDNDIVNIQGYSIGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRHNF +HG S +HR GS G PGRV+ +MAGR G +++T++ L++V Sbjct: 120 SGYQKRHNFARGPMSHG-SKNHRLPGSIGAGSTPGRVYPGTRMAGRKGDSKITIRGLKIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD +R L++VKG VPG + + K Sbjct: 179 KVDSERSLLIVKGSVPGKP-GGLLTITQVKK 208 >gi|86132544|ref|ZP_01051137.1| 50S ribosomal protein L3 [Dokdonia donghaensis MED134] gi|85816786|gb|EAQ37971.1| 50S ribosomal protein L3 [Dokdonia donghaensis MED134] Length = 203 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 78/206 (37%), Positives = 125/206 (60%), Gaps = 6/206 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C + RT + +GY A+Q+G + K + Sbjct: 2 SGLIGKKVGMTSIFDENGKNIPCTVIEAGPCVITQVRTKETDGYEALQLGFDDVK--KAN 59 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G K+K+ EF+ + + +G + +F G+ VDV+G + GKGF G Sbjct: 60 KAATGHAKKAGTVAKRKVVEFQGFEGE--FKLGDAITVDHFAEGEFVDVSGTSKGKGFQG 117 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH F G +ATHG R+ GS G P RVFK +MAGRMGG+++ V+NL+V+ Sbjct: 118 VVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGDKIKVQNLKVLK 177 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L++VKGCVPG KN++++++ Sbjct: 178 VVAEKNLLVVKGCVPG-HKNAYVIIQ 202 >gi|320352917|ref|YP_004194256.1| 50S ribosomal protein L3P [Desulfobulbus propionicus DSM 2032] gi|320121419|gb|ADW16965.1| LSU ribosomal protein L3P [Desulfobulbus propionicus DSM 2032] Length = 210 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 85/208 (40%), Positives = 120/208 (57%), Gaps = 4/208 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 G++ RKLGMT VY+ GR IPVTV+ C ++ +T++K GY A+QVG E K + Sbjct: 4 TKGILGRKLGMTRVYDENGRSIPVTVIEAGPCTILQKKTVEKEGYNAIQVGFLEKKETRM 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGF 120 +KP G + EFRV D+ VG + ++G LVD++G + G+GF Sbjct: 64 NKPEVGHCKRSGGKGFYYIKEFRVTNP-DVYEVGQQITVSEIVSIGDLVDISGKSKGRGF 122 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH F G R THG S HR+ GS GC P RV K KK+ GRMG +T KNL ++ Sbjct: 123 QGVIKRHGFAGGRTTHG-SDFHRAPGSIGCSAWPSRVLKGKKLPGRMGNESMTQKNLRII 181 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208 + ++ ++LV+G VPGA KN + + Sbjct: 182 DIRNEDNVLLVRGTVPGA-KNGLLNIYS 208 >gi|123966973|ref|YP_001012054.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9515] gi|166233178|sp|A2BYT6|RL3_PROM5 RecName: Full=50S ribosomal protein L3 gi|123201339|gb|ABM72947.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9515] Length = 217 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 82/208 (39%), Positives = 129/208 (62%), Gaps = 3/208 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +G +PVT++ C+V +T +GY A+Q+G G +K K+ Sbjct: 1 MSIGILGKKLGMSQLFDDDGNAVPVTLIEAGPCRVTQLKTQSLDGYTAIQIGYGVSKDKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SKP +G K L EF+V+++ +G + + F VGQ VD++G ++G+GF Sbjct: 61 LSKPEKGHLLKSGKELLKHLKEFKVEENSS-YEIGKEITVTNFEVGQKVDISGKSMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRH F +HG S +HR+ GSTG PGR++ K+MAGR GG ++T K L VV Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKKITTKGLLVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208 +DD++ L++VKG VPG S + +R Sbjct: 179 KIDDQKNLLVVKGSVPGKP-GSIVNIRP 205 >gi|258648159|ref|ZP_05735628.1| 50S ribosomal protein L3 [Prevotella tannerae ATCC 51259] gi|260852040|gb|EEX71909.1| 50S ribosomal protein L3 [Prevotella tannerae ATCC 51259] Length = 206 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 81/205 (39%), Positives = 119/205 (58%), Gaps = 5/205 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ IP TV+ + C V ++++K GY AVQ+G EAK KN + Sbjct: 3 GLLGKKIGMTSVFSADGKNIPCTVVEVGPCVVTQIKSVEKEGYNAVQLGFQEAKEKNTTA 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSG 122 P+ G F +PK+ L EF D +G + F + VDV G + G GF G Sbjct: 63 PLLGHFKKAGTTPKRHLAEF--TGFDKEFNLGDTITVADVFEGVEYVDVVGTSKGHGFQG 120 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 MKRH FGG ++THG R G+ G P +VFK +MAG+MG R T +NL+V+ Sbjct: 121 VMKRHGFGGVGQSTHGQDDRARKPGAIGACSYPAKVFKGMRMAGQMGNRRATNQNLKVIK 180 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 V + L+L+KG VPG K S +++ Sbjct: 181 VIPEHNLLLLKGSVPGC-KGSIVII 204 >gi|328953158|ref|YP_004370492.1| 50S ribosomal protein L3 [Desulfobacca acetoxidans DSM 11109] gi|328453482|gb|AEB09311.1| 50S ribosomal protein L3 [Desulfobacca acetoxidans DSM 11109] Length = 208 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 78/204 (38%), Positives = 116/204 (56%), Gaps = 1/204 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RKLGMT +++ EG +PVTV+ C +V ++L +GY AVQVG ++ ++KP Sbjct: 5 LLGRKLGMTRIFSAEGVALPVTVIEAGPCYIVQKKSLAADGYDAVQVGFIRKRLDKLTKP 64 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 ++G + + + + L VG S F +G+ VDV G + G+GF+G + Sbjct: 65 LQGHYEKHGFKSGFRFLKEFRLESISDLEVGQELDVSQFEIGERVDVVGFSKGRGFAGVI 124 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR F THG S+SHR+ GS G P RVFK KK+ GRMG RVT LEVV V Sbjct: 125 KRWGFQRGPETHG-SMSHRAPGSIGASAYPSRVFKGKKLPGRMGNARVTTLTLEVVDVRP 183 Query: 185 KRGLILVKGCVPGAKKNSWILVRD 208 + L+++KG VPGA+ ++ + Sbjct: 184 ESNLLILKGAVPGARHGLLLIKKS 207 >gi|54293321|ref|YP_125736.1| 50S ribosomal protein L3 [Legionella pneumophila str. Lens] gi|81822454|sp|Q5WZL2|RL3_LEGPL RecName: Full=50S ribosomal protein L3 gi|53753153|emb|CAH14600.1| 50S ribosomal subunit protein L3 [Legionella pneumophila str. Lens] Length = 216 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 93/217 (42%), Positives = 129/217 (59%), Gaps = 1/217 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ EG +PV+V+ + +V +T +GY AVQ+ G K Sbjct: 1 MMIGLLGRKIGMTRVFTPEGVSVPVSVVEVHPNRVSQVKTAANDGYSAVQLTGGIKKSSK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VSKP+ G F+ + EFR+ +D P + FT GQ VDV+G+T GKGF Sbjct: 61 VSKPVAGHFAKAQIDAGDMQVEFRIDSEDAFTPGQVISVADVFTAGQYVDVSGLTKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNF A+HG S SHR GS G Q PGRVFK KKMAG MG R T+++LE+V Sbjct: 121 AGTVKRHNFRTQDASHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNARCTIQSLELV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 VD +R L+L+KG +PGA S + ++ + K + Sbjct: 181 KVDSERNLLLIKGAIPGAP-GSRVEIKPAVKKQARGE 216 >gi|126662264|ref|ZP_01733263.1| 50S ribosomal protein L3 [Flavobacteria bacterium BAL38] gi|126625643|gb|EAZ96332.1| 50S ribosomal protein L3 [Flavobacteria bacterium BAL38] Length = 205 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 87/206 (42%), Positives = 126/206 (61%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ RK+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G + K Sbjct: 2 SGLIGRKIGMTSIFDENGKNIPCTVIECGPCVVTQVRTNEVDGYSAIQLGFDDKAEKRSI 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F + KKK+ EF+ + + +G V + F G+ VDV G++ GKGF G Sbjct: 62 KAELGHFKKAGTAAKKKVVEFKGFE--EEYKLGDVIAVDLFAEGEFVDVLGVSKGKGFQG 119 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG +ATHG R+ GS G P RVFK +MAGRMGG+ VTV+NL V+ Sbjct: 120 VVKRHGFGGVGQATHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGGDNVTVQNLRVLK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L++VKGCVPG KNS+++++ Sbjct: 180 VVGEKNLLVVKGCVPG-HKNSYVIIQ 204 >gi|114567841|ref|YP_754995.1| 50S ribosomal protein L3 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122317284|sp|Q0AUI0|RL3_SYNWW RecName: Full=50S ribosomal protein L3 gi|114338776|gb|ABI69624.1| LSU ribosomal protein L3P [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 212 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 85/210 (40%), Positives = 127/210 (60%), Gaps = 4/210 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 + ++ K+GMT +++ + +PV+++ C V+ + ++ +GY ++QVG K K Sbjct: 5 KKAIMGIKIGMTQIFDENDKAVPVSIIEAGPCTVLQKKKVESDGYESIQVGFYNLKEKLA 64 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP RG F NV P + + EFR+ DD VG + FT G LVDV G + GKGF+ Sbjct: 65 NKPARGHFKKANVKPLRYIKEFRIDNVDD-YDVGQEITADIFTTGDLVDVIGTSKGKGFA 123 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNF HG S HR GS G + P RVFK +K+ GR+GG RVTV+ L+VV Sbjct: 124 GGVKRHNFARGSMGHG-SKYHRRPGSLGAKG-PARVFKGRKLPGRLGGERVTVQGLKVVK 181 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V R LIL+KG +PG K+ ++++++S K Sbjct: 182 VYPDRNLILIKGSIPGPKRG-FVIIKNSVK 210 >gi|288818164|ref|YP_003432512.1| ribosomal protein L3 [Hydrogenobacter thermophilus TK-6] gi|288787564|dbj|BAI69311.1| ribosomal protein L3 [Hydrogenobacter thermophilus TK-6] gi|308751765|gb|ADO45248.1| 50S ribosomal protein L3 [Hydrogenobacter thermophilus TK-6] Length = 235 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 86/211 (40%), Positives = 131/211 (62%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ +G IPVT++ + VV ++++K+GY A+Q+GA AK K+ Sbjct: 1 MAIGLIGKKVGMTRVFLKDGTAIPVTLIEIPPHTVVAIKSIEKDGYSALQLGAYSAKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119 ++KP G V V ++L EFRV D VG + F+ G+LVDV G++ G+G Sbjct: 61 LTKPEMGHLQKVGVRLLRRLKEFRVD-DIAGYQVGQELTVADVFSPGELVDVVGISKGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKR +FGG +HG HR+ GS G R DPGRV+K+K+MAG G +V +++L V Sbjct: 120 FTGTMKRWDFGGFPKSHG-HRYHRAVGSIGNRSDPGRVWKSKRMAGHYGAQKVRIQSLFV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V + ++ L+LVKG VPG +L + + Sbjct: 179 VDIVPEKNLMLVKGSVPGPAGGLVVLEKSTI 209 >gi|32475058|ref|NP_868052.1| 50S ribosomal protein L3 [Rhodopirellula baltica SH 1] gi|42559597|sp|Q7UN20|RL3_RHOBA RecName: Full=50S ribosomal protein L3 gi|32445598|emb|CAD75599.1| 50S ribosomal protein L3 [Rhodopirellula baltica SH 1] Length = 228 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 81/230 (35%), Positives = 123/230 (53%), Gaps = 23/230 (10%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ RK+GMT ++ +G +PVTV+ C V+ R+ D++GY AVQ+G + + Sbjct: 1 MSPSILGRKIGMTQIFLEDGTAVPVTVVQAGPCHVLQVRSKDRDGYEAVQMGFEDKPRRL 60 Query: 61 VSKPMRGFFS-------------------SVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS 101 + RG + + P++ + EFR + + VG + Sbjct: 61 AKRSERGQVATIESKRSKKRSAAGIEAPAKADCEPQRFVREFRGSSEAN---VGDTLTVE 117 Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F + VD+TG + G+GF+G MKRHNF G RATHGV HR G TG P R FK K Sbjct: 118 QFNDVKKVDITGTSKGRGFAGVMKRHNFAGQRATHGVKKCHRHAGGTGMSASPSRTFKGK 177 Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +MAG+ G +VT +NLEVV VD + L++++G VPG ++ +R + K Sbjct: 178 RMAGQYGNAKVTTRNLEVVRVDAENNLLMIRGAVPGPN-GGFVSIRQTNK 226 >gi|110004229|emb|CAK98567.1| 50s ribosomal protein l3 [Spiroplasma citri] Length = 258 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 83/210 (39%), Positives = 131/210 (62%), Gaps = 6/210 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT ++ +GR IPVTV+ ++ V+ T ++NGY A+Q+ + ++ VS Sbjct: 2 KGILGRKIGMTQIFATDGRLIPVTVVEVEPNVVLRVLTKEQNGYQALQLAVEDKRISLVS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP +G F N +PK+ + E R + D G + FT G+ VDVTG + GKGF+G Sbjct: 62 KPDQGQFKKANTTPKRFVKEIR---NMDGYNPGDIIKADIFTAGEFVDVTGTSKGKGFTG 118 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 ++KRHN+ HG S HR GS G P R+ K+KKM G MG +VT++NLEV+++ Sbjct: 119 SIKRHNYSRGPMGHG-SGYHRGVGSMGAIA-PNRILKSKKMPGHMGTKKVTIQNLEVIAI 176 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D ++ +LVKG +PG KK +++++++ K Sbjct: 177 DTEKNALLVKGSIPGPKK-QFVIIKEAIKG 205 >gi|114778824|ref|ZP_01453631.1| 50S ribosomal protein L3 [Mariprofundus ferrooxydans PV-1] gi|114550955|gb|EAU53519.1| 50S ribosomal protein L3 [Mariprofundus ferrooxydans PV-1] Length = 199 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 93/202 (46%), Positives = 126/202 (62%), Gaps = 3/202 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++ +G I VTVL+++ C+VV R+ DK+GY AVQVG G AK +N ++P++G ++ Sbjct: 1 MTQIFTADGSAIAVTVLNIEPCKVVARRSADKDGYDAVQVGFGAAK-RNTTRPVQGHYAR 59 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 L EFR+ D + +G + + F GQ +DV+G + G GF+G MKR+NFGG Sbjct: 60 QGQEVAGGLKEFRIAADAEF-ELGQELNATLFEAGQKIDVSGTSKGHGFAGVMKRYNFGG 118 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 RATHG HR GSTG Q PGRVF KKM G G R T +NLEVV VD + ILV Sbjct: 119 GRATHGAEKVHRQMGSTGQCQWPGRVFPGKKMPGHFGNVRSTTQNLEVVRVDAEANRILV 178 Query: 192 KGCVPGAKKNSWILVRDSFKSA 213 KG VPG+ +N + +R + K A Sbjct: 179 KGAVPGS-RNGLVELRPAVKGA 199 >gi|147799626|emb|CAN75145.1| hypothetical protein VITISV_033846 [Vitis vinifera] Length = 243 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 97/193 (50%), Positives = 128/193 (66%), Gaps = 1/193 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G +A K GM+ +++ G R+P+TVL LD+ V +T +K G A+QVG G+ K K++ Sbjct: 7 RTGAIAVKCGMSALWDKWGARVPITVLWLDDNIVSQVKTFEKEGXNALQVGCGQKKAKHL 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F + V K+KL EF V +D LLPVG+ +F GQ VDVTG+T GKGF Sbjct: 67 TKPEVGHFRAQGVPLKRKLREFPVTED-ALLPVGTTIGVRHFVPGQYVDVTGITRGKGFQ 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR F G+ A+HG S+SHRS GSTG R PG+VFK KKM GRMGG + TVKN+ V Sbjct: 126 GGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGKQRTVKNVWVYK 185 Query: 182 VDDKRGLILVKGC 194 +D R L+ V+G Sbjct: 186 IDPTRNLMWVRGQ 198 >gi|124023995|ref|YP_001018302.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9303] gi|166233177|sp|A2CC27|RL3_PROM3 RecName: Full=50S ribosomal protein L3 gi|123964281|gb|ABM79037.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9303] Length = 218 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 127/211 (60%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ +GR IPVT++ C++ +T D +GY AVQ+G G+ + K Sbjct: 1 MSIGILGKKLGMSQFFDDQGRAIPVTLIEAGPCRITQLKTSDIDGYAAVQIGFGDTREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + K L E+RV+ + L +G+ + F GQ VDV+G T+G+GF Sbjct: 61 INKPSKGHLTKSGEVLLKHLREYRVEGLEG-LELGAAITVGSFEAGQKVDVSGDTMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRH F +HG S +HR GSTG PGR++ K+MAGR GG + T + L ++ Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKRTTRGLTIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD R L++VKG VPG + + +R + + Sbjct: 179 KVDSNRNLLVVKGSVPGKP-GALLNIRPAKR 208 >gi|152964657|ref|YP_001360441.1| ribosomal protein L3 [Kineococcus radiotolerans SRS30216] gi|189042849|sp|A6W5T8|RL3_KINRD RecName: Full=50S ribosomal protein L3 gi|151359174|gb|ABS02177.1| ribosomal protein L3 [Kineococcus radiotolerans SRS30216] Length = 219 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 86/212 (40%), Positives = 121/212 (57%), Gaps = 2/212 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 GV+ KLGMT +++ + R +PVTV+ ++ V RT +GY AVQ+ + +K Sbjct: 8 GVLGTKLGMTQLWDADNRIVPVTVVKVEPNVVTQIRTTTVDGYEAVQLATTAIAQRKATK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+P++ L E R D +G + F G VDV G T GKGF+G Sbjct: 68 PAAGHFEKAGVAPRRHLVELRTTDAAD-YSLGQEVTAEAFATGATVDVVGTTKGKGFAGV 126 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G+ A+HG +HR GS G PGRVFK +MAGRMG R T +NL V +VD Sbjct: 127 MKRHGFHGVGASHGAHRNHRKPGSIGGCATPGRVFKGMRMAGRMGAARQTTQNLTVQAVD 186 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++GL+L+ G +PG + +LV+ + K+ V Sbjct: 187 AEKGLLLITGAIPGP-RGGLVLVKSASKARVK 217 >gi|149919182|ref|ZP_01907665.1| 50S ribosomal protein L3 [Plesiocystis pacifica SIR-1] gi|149819896|gb|EDM79318.1| 50S ribosomal protein L3 [Plesiocystis pacifica SIR-1] Length = 223 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 102/217 (47%), Positives = 133/217 (61%), Gaps = 2/217 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GMT Y +G R+PVTVL V HRT++++GY A+Q+ + K +S Sbjct: 5 MGLLTKKIGMTEFYKEDGTRVPVTVLLAKGNVVTAHRTVERDGYTALQLAFDDQKASRLS 64 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP G F VSPK+K+ EFRV D VGS S F+ GQLVDVTG + GKGF Sbjct: 65 KPKLGQFKKAEVSPKRKIKEFRVAADVVAQHAVGSEVDVSIFSDGQLVDVTGTSKGKGFQ 124 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH G + THG +R GS GCR PGRV K+MAG+MG VTV+NLEV Sbjct: 125 GVMKRHGMRGEKRTHGQHEVYRHGGSIGCRLTPGRVIPGKRMAGQMGNETVTVQNLEVAK 184 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 V +GLILVKG +PG KN ++ +R + K+A+ K Sbjct: 185 VIADKGLILVKGAIPGG-KNGYVQIRHAIKAAIRTKH 220 >gi|167518906|ref|XP_001743793.1| hypothetical protein [Monosiga brevicollis MX1] gi|163777755|gb|EDQ91371.1| predicted protein [Monosiga brevicollis MX1] Length = 309 Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 98/214 (45%), Positives = 143/214 (66%), Gaps = 2/214 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+ ++A+KLGMT ++ G IP+TVL +++CQVV HRT++++GY A+ +GA K + Sbjct: 66 RAPLIAKKLGMTQTWDRWGTLIPMTVLQVEDCQVVGHRTIERDGYEALILGAETIKDSKL 125 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +RG F+ + K+ + E R+ + +LP+G S +F GQLVDV G TIGKGF+ Sbjct: 126 DGRIRGQFAKHGLPSKRHMEEARISAE-AMLPIGYELSCEHFEPGQLVDVRGTTIGKGFA 184 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF G+ ATHGV+ +HR G G QDPGRV+K K+ AGRMGG +NL V+ Sbjct: 185 GVMKRHNFKGMPATHGVTKTHRRMGGFGGGQDPGRVWKGKRNAGRMGGVLRWQRNLAVIR 244 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +D + LI+V G +PGA+ NS +LVRD+ + ++ Sbjct: 245 IDTRYNLIMVAGSIPGAE-NSRVLVRDAIMNPLH 277 >gi|159904219|ref|YP_001551563.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9211] gi|226730549|sp|A9BCP7|RL3_PROM4 RecName: Full=50S ribosomal protein L3 gi|159889395|gb|ABX09609.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9211] Length = 219 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 79/209 (37%), Positives = 126/209 (60%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ +GR +PVT++ C++ ++L +GY AVQ+G G + K Sbjct: 1 MSIGILGKKLGMSQFFDDKGRSVPVTLIEAGPCRITQLKSLATDGYSAVQIGYGFTREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G S + L E+RV D + +G+ + F GQ VDV+G ++G+GF Sbjct: 61 VNKPFKGHLSKSGEGFLRHLHEYRVD-DLGVYELGAKITVGNFEAGQKVDVSGNSMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH+F +HG S +HR GSTG PGR++ K+MAGR GG ++T + L ++ Sbjct: 120 AGYQKRHSFSRGPMSHG-SKNHRQPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLTIM 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +D R L++VKG VPG S + +R + Sbjct: 179 KIDSDRNLLVVKGSVPGKP-GSLLNIRPA 206 >gi|256830538|ref|YP_003159266.1| ribosomal protein L3 [Desulfomicrobium baculatum DSM 4028] gi|256579714|gb|ACU90850.1| ribosomal protein L3 [Desulfomicrobium baculatum DSM 4028] Length = 210 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 79/204 (38%), Positives = 115/204 (56%), Gaps = 1/204 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RK+GMT +Y +G IPVTV+ C V+ + +K+GY A+QVG E ++K Sbjct: 6 GIVGRKIGMTRIYGADGNVIPVTVIQAGPCPVIEKKVSEKDGYTAIQVGFEEVAAHRLTK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G N K L E R+ D +G + FT G+ + VTG + G+GF+G Sbjct: 66 PEQGHQQKANCGFYKMLKEIRL-GSVDEYEIGQKLTVEMFTPGEKIRVTGTSKGRGFAGV 124 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 ++R NF G A+HG HR GS G P +VFK KKM G++G T+ NLE+V V Sbjct: 125 IRRWNFSGAPASHGHEKVHRKPGSIGQCAWPSKVFKGKKMPGQLGNKTATMLNLEIVDVR 184 Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207 + ++LV+G VPG K+ +L + Sbjct: 185 PEDNVVLVRGQVPGPKQGIVVLSK 208 >gi|255038089|ref|YP_003088710.1| 50S ribosomal protein L3 [Dyadobacter fermentans DSM 18053] gi|254950845|gb|ACT95545.1| ribosomal protein L3 [Dyadobacter fermentans DSM 18053] Length = 206 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 85/206 (41%), Positives = 126/206 (61%), Gaps = 5/206 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +YN +G+ + TV+ C V R+ +K+GY A+Q+G GE K KN S Sbjct: 2 SGLIGKKIGMTSLYNADGQALACTVIQAGPCVVTQVRSEEKDGYKAIQLGFGEKKEKNTS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121 +P+ G F N +PK+KL EF+ + + +G+ S F G+ VDV G G+GF Sbjct: 62 QPLIGHFKKANTTPKQKLVEFK--EFEVEHELGTSLSVQDIFEEGEFVDVVGSAKGRGFQ 119 Query: 122 GAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH FGG THG R GS G P RVFK +M GRMG NRV ++NL ++ Sbjct: 120 GVVKRHGFGGVGGQTHGQHNRARHPGSIGACSFPSRVFKGIRMGGRMGNNRVKIQNLRIL 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 V ++ +++V G VPG+ KNS++++ Sbjct: 180 KVIPEQNILVVSGSVPGS-KNSFLII 204 >gi|299830598|ref|YP_003735046.1| 50S ribosomal protein L3 [Durinskia baltica] gi|297384962|gb|ADI40261.1| 50S ribosomal protein L3 [Durinskia baltica] Length = 207 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 121/206 (58%), Gaps = 2/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT +++ G IPVT+L + C V +T K+GY ++QVG K+ Sbjct: 1 MSVGLLGNKIGMTQIFDETGNIIPVTILKVGPCVVTQVKTEAKDGYNSIQVGYSRVSSKS 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G N+ P K L EFR+ D + VG + ++GQ VD+ G TIGKGF Sbjct: 61 LTQPELGHLQKSNIQPLKHLKEFRITNDQN-FEVGQTLNVDLLSLGQFVDIQGKTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRHNF THG S +HR+ GS G PGRV K+M+G++G +TVK L+V+ Sbjct: 120 TGLQKRHNFARGPMTHG-SKNHRAPGSIGMGTTPGRVLPGKRMSGQVGNKVITVKKLKVI 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 ++ + ++++KG VPG N +V Sbjct: 179 QLNLEENILVIKGSVPGKPGNLLSIV 204 >gi|312130549|ref|YP_003997889.1| lsu ribosomal protein l3p [Leadbetterella byssophila DSM 17132] gi|311907095|gb|ADQ17536.1| LSU ribosomal protein L3P [Leadbetterella byssophila DSM 17132] Length = 205 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 85/206 (41%), Positives = 123/206 (59%), Gaps = 6/206 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT ++N G +P TV+ C V RT + +GY A+Q+G GE K K + Sbjct: 2 SGIIGKKIGMTTIFN-NGAAVPCTVIEAGPCVVTQVRTEETDGYNAIQLGFGEKKEKRTT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121 K + G F N +PK+KL EF+ + + +G F G+ VDV+G T GKGF Sbjct: 61 KALLGHFKKANTTPKRKLVEFK--EFEKEFALGDTIKVEDVFVEGEFVDVSGNTKGKGFQ 118 Query: 122 GAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH FGG ++THG R+ GS G P RVFK +MAGRMG +VT++NL+V+ Sbjct: 119 GVVKRHGFGGVGQSTHGQHNRLRAPGSIGACSYPARVFKGLRMAGRMGNTKVTIQNLQVL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 + ++ LI+V G VPG KN + + Sbjct: 179 KLFPEKNLIIVSGSVPGG-KNGIVTL 203 >gi|289449936|ref|YP_003475784.1| 50S ribosomal protein L3 [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184483|gb|ADC90908.1| 50S ribosomal protein L3 [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 211 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 87/213 (40%), Positives = 127/213 (59%), Gaps = 4/213 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ RK GMT +++ G +PVTV+ QVV +T++ +GY AV+VG + K Sbjct: 1 MEKFMLGRKAGMTQLFDENGVAVPVTVIECGPVQVVQKKTVEVDGYSAVKVGFADKKETA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119 V+KP G F +SPK+ L EF V ++++ G +F VG VDV+G++ GKG Sbjct: 61 VNKPDLGQFKKAGISPKRFLKEFVVAENNE-FAAGQELKVSDFFAVGDRVDVSGVSKGKG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 + G +KRH G HG S HR GS G PGRVFK KKM G+MG VTV+NL+V Sbjct: 120 YQGNVKRHGQKGGPQAHG-SKYHRRVGSMGPNTWPGRVFKGKKMPGQMGNVNVTVQNLDV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R +I +KG VPG + ++ ++++ K+ Sbjct: 179 VLVDGERNIIALKGAVPGP-RGGYLSIKETVKA 210 >gi|217967369|ref|YP_002352875.1| ribosomal protein L3 [Dictyoglomus turgidum DSM 6724] gi|217336468|gb|ACK42261.1| ribosomal protein L3 [Dictyoglomus turgidum DSM 6724] Length = 215 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 116/211 (54%), Gaps = 4/211 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 ++ RK+GMT ++ G +PVTV+ C V+ RT +K+GY A+Q+G K + Sbjct: 6 TKAILGRKIGMTQIFTENGEMVPVTVIRGGPCLVLNVRTKEKDGYDAIQLGFERCKESKL 65 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F + + P + + E RV+ D G F G+ VD+TG + G GF+ Sbjct: 66 NKPQLGIFKKLGLPPFRIIKEVRVKNPLDYTK-GQEIRVDIFQEGEFVDITGKSKGHGFT 124 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR NF R +HG S HR S G V K +KMAGR G +TV+NL++V Sbjct: 125 GHIKRWNFSRGRMSHG-SKFHRRRASIGAGG-VQHVMKGQKMAGRWGNETITVQNLKIVK 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++ LILVKG VPG N +++R + K Sbjct: 183 VDKEKDLILVKGAVPGPTGN-LLIIRKAVKK 212 >gi|260061897|ref|YP_003194977.1| 50S ribosomal protein L3 [Robiginitalea biformata HTCC2501] gi|88786030|gb|EAR17199.1| 50S ribosomal protein L3 [Robiginitalea biformata HTCC2501] Length = 196 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 81/196 (41%), Positives = 116/196 (59%), Gaps = 3/196 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT +++ G+ IP TV+ C V RT + +GY A+Q+G + K +K G F Sbjct: 1 MTSIFDENGKNIPCTVIEAGPCVVTQVRTEEVDGYNALQLGFDDKADKRANKAENGHFKK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 +PKKK+ EFR ++ +G + F G+ VDV G++ GKGF G +KRH FGG Sbjct: 61 AGTAPKKKVVEFRYFEE-GAFKLGDTINVELFKEGEFVDVNGISKGKGFQGVVKRHGFGG 119 Query: 132 -LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190 ++THG R+ GS G DP RVFK KMAG+MG RVTV+NL V+ V ++ L++ Sbjct: 120 VGQSTHGQHNRLRAPGSIGAASDPSRVFKGMKMAGQMGNQRVTVQNLRVLKVVPEKNLLV 179 Query: 191 VKGCVPGAKKNSWILV 206 +KG VPG KN++I + Sbjct: 180 LKGAVPG-HKNAYITI 194 >gi|11465780|ref|NP_053924.1| ribosomal protein L3 [Porphyra purpurea] gi|1710474|sp|P51314|RK3_PORPU RecName: Full=50S ribosomal protein L3, chloroplastic gi|1276780|gb|AAC08200.1| 50S ribosomal protein L3 [Porphyra purpurea] Length = 205 Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats. Identities = 84/206 (40%), Positives = 125/206 (60%), Gaps = 3/206 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT ++ G IPVTV+ + C + +++ +GY A+QVG + + Sbjct: 1 MSVGILGTKVGMTQFFDETGLSIPVTVIQVGPCVITQIKSMSTDGYNAIQVGYKQVVEQK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SKP+ G P K L E+ V+ +D V VFS + F VGQ V+V+ +IGKGF Sbjct: 61 LSKPLLGHLKKSQSPPLKYLREYLVESIEDF-EVSQVFSTNIFEVGQKVNVSSKSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRH+F +HG S +HR GS G PGRV+ K MAG+MG +VT+KNL++V Sbjct: 120 SGYQKRHHFSRGPMSHG-SKNHRQPGSIGAGTTPGRVYPGKNMAGQMGNKKVTIKNLQIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 S++ + L+L+KG VPG K+ + + V Sbjct: 179 SINIENDLLLLKGAVPG-KQGALVKV 203 >gi|296105878|ref|YP_003617578.1| large subunit ribosomal protein L3 [Legionella pneumophila 2300/99 Alcoy] gi|295647779|gb|ADG23626.1| large subunit ribosomal protein L3 [Legionella pneumophila 2300/99 Alcoy] gi|307609138|emb|CBW98585.1| 50S ribosomal subunit protein L3 [Legionella pneumophila 130b] Length = 215 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 92/215 (42%), Positives = 128/215 (59%), Gaps = 1/215 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+ EG +PV+V+ + +V +T +GY AVQ+ G K VS Sbjct: 2 IGLLGRKIGMTRVFTPEGVSVPVSVVEVQPNRVSQVKTAANDGYSAVQLTGGTKKSSKVS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ G F+ + EFR+ +D P + FT GQ VDV+G+T GKGF+G Sbjct: 62 KPVAGHFAKAQIDAGDMQVEFRIDSEDAFTPGQVISVADVFTAGQYVDVSGLTKGKGFAG 121 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHNF A+HG S SHR GS G Q PGRVFK KKMAG MG R T+++LE+V V Sbjct: 122 TVKRHNFRTQDASHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNARCTIQSLELVKV 181 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 D +R L+L+KG +PGA S + ++ + K + Sbjct: 182 DSERNLLLIKGAIPGAP-GSRVEIKPAVKKQARGE 215 >gi|218961433|ref|YP_001741208.1| 50S ribosomal subunit protein L3 [Candidatus Cloacamonas acidaminovorans] gi|167730090|emb|CAO81002.1| 50S ribosomal subunit protein L3 [Candidatus Cloacamonas acidaminovorans] Length = 210 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 84/206 (40%), Positives = 121/206 (58%), Gaps = 3/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GMT V++ +G+ IPVTV+ C+V+ RT +NGY A+Q+G E + VS Sbjct: 2 IGLIGKKIGMTQVFDSDGKVIPVTVIKAGPCKVICKRTEAENGYEAIQIGYEEIPARKVS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPV--GSVFSPSYFTVGQLVDVTGMTIGKGF 120 KP++G F N + + EFR + V G F + V V+ + G+GF Sbjct: 62 KPLQGHFKKYNSPFYRYVREFRPSYGQHIESVQIGDELKADIFGENETVSVSANSKGRGF 121 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNFGG ++HG S R GS G P RVFK KMAG+ G +VTV +L+V+ Sbjct: 122 TGVMKRHNFGGFISSHGSHESFRGPGSIGQCAQPSRVFKGMKMAGQYGNTKVTVHHLKVI 181 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 VD + LI+VKG VPG +NS + + Sbjct: 182 KVDPENNLIMVKGAVPG-HRNSLVTI 206 >gi|187734815|ref|YP_001876927.1| ribosomal protein L3 [Akkermansia muciniphila ATCC BAA-835] gi|226725123|sp|B2UMU0|RL3_AKKM8 RecName: Full=50S ribosomal protein L3 gi|187424867|gb|ACD04146.1| ribosomal protein L3 [Akkermansia muciniphila ATCC BAA-835] Length = 211 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 3/213 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ +K+GMT +++ G +PVTV+ + +T DK+GY A+QV K Sbjct: 1 MALGLIGKKVGMTRLFDQESGAMVPVTVIDVKGNTFAQIKTEDKDGYNAIQVAFDAQKES 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+KP G F + + P K L EFRV+ + F+ GQ VDV G + GKG Sbjct: 61 RVAKPQAGHFKKLGIQPTKLLKEFRVEASELPAEGAKDPGVDLFSAGQWVDVIGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F GAM+RHNF G A HG S+ HR G G PGRV+KN+KM G+MG + TV+NL+V Sbjct: 121 FQGAMRRHNFHGSPAAHG-SMMHRRTGGVGGCSTPGRVWKNQKMPGQMGNAKRTVQNLKV 179 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V+V + +IL+ G VPGA + S++++R + K Sbjct: 180 VAVRPEDNVILISGAVPGA-RGSYLVIRPAKKK 211 >gi|90994504|ref|YP_536994.1| ribosomal protein L3 [Porphyra yezoensis] gi|109893085|sp|Q1XDH4|RK3_PORYE RecName: Full=50S ribosomal protein L3, chloroplastic gi|90819068|dbj|BAE92437.1| 50S ribosomal protein L3 [Porphyra yezoensis] Length = 205 Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 120/206 (58%), Gaps = 3/206 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT ++ G IPVTV+ + C + + + +GY A+QVG + + Sbjct: 1 MSVGILGTKVGMTQFFDEAGLSIPVTVIQVGPCVITQIKAVSTDGYNAIQVGYKQVAEQK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+ G P K L E+ ++ DD V + S F VGQ ++V+ ++GKGF Sbjct: 61 LNKPLLGHLKKSQAPPLKYLREYEMKSTDD-FEVSQILSTDLFQVGQKINVSSRSVGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRH+F +HG S +HR GS G PGRV+ K MAG++G +VT+KNL++V Sbjct: 120 SGYQKRHHFSRGPMSHG-SKNHRQPGSIGAGTTPGRVYPGKNMAGQLGNKKVTIKNLQIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 S++ + L++VKG VPG + + + Sbjct: 179 SINSENDLLIVKGAVPGKP-GALVKI 203 >gi|53715466|ref|YP_101458.1| 50S ribosomal protein L3 [Bacteroides fragilis YCH46] gi|60683438|ref|YP_213582.1| 50S ribosomal protein L3 [Bacteroides fragilis NCTC 9343] gi|253566670|ref|ZP_04844123.1| 50S ribosomal protein L3 [Bacteroides sp. 3_2_5] gi|255011646|ref|ZP_05283772.1| 50S ribosomal protein L3 [Bacteroides fragilis 3_1_12] gi|265767548|ref|ZP_06095214.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_16] gi|313149482|ref|ZP_07811675.1| 50S ribosomal protein L3 [Bacteroides fragilis 3_1_12] gi|81313514|sp|Q5L8A9|RL3_BACFN RecName: Full=50S ribosomal protein L3 gi|81824898|sp|Q64NK8|RL3_BACFR RecName: Full=50S ribosomal protein L3 gi|52218331|dbj|BAD50924.1| 50S ribosomal protein L3 [Bacteroides fragilis YCH46] gi|60494872|emb|CAH09679.1| putative 50S ribosomal protein L3 [Bacteroides fragilis NCTC 9343] gi|251944842|gb|EES85317.1| 50S ribosomal protein L3 [Bacteroides sp. 3_2_5] gi|263252853|gb|EEZ24365.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_16] gi|301164923|emb|CBW24484.1| putative 50S ribosomal protein L3 [Bacteroides fragilis 638R] gi|313138249|gb|EFR55609.1| 50S ribosomal protein L3 [Bacteroides fragilis 3_1_12] Length = 205 Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats. Identities = 84/204 (41%), Positives = 127/204 (62%), Gaps = 4/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PK+ L EF+ + ++ L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKRHLAEFK--EFENELNLGDTVTVELFDGADYVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG ++THG R GS G P +VFK +M G+MGG+RVTV+NL+V+ V Sbjct: 121 VKRHGFGGVGQSTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTVQNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 + L+L+KG VPG K S +L+ Sbjct: 181 IAEHNLLLIKGSVPGC-KGSIVLI 203 >gi|116493163|ref|YP_804898.1| 50S ribosomal protein L3P [Pediococcus pentosaceus ATCC 25745] gi|122265373|sp|Q03EB6|RL3_PEDPA RecName: Full=50S ribosomal protein L3 gi|116103313|gb|ABJ68456.1| LSU ribosomal protein L3P [Pediococcus pentosaceus ATCC 25745] Length = 210 Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 121/211 (57%), Gaps = 5/211 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 G++ +K+GMT V+ G IPVTV+ V+ +T++ +GY +VQ+G + + Sbjct: 3 TKGILGKKVGMTQVFTEAGELIPVTVIDTTPNVVLQLKTVENDGYSSVQLGFDDKRQVLS 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP +G + N +PK+ + E R + D + VG + F G++VDVTG T G GF Sbjct: 63 NKPEQGHVAKANTNPKRFIHEIRNVELGD-VKVGDTIAADIFEAGEIVDVTGTTKGHGFQ 121 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +K+ HG S HR GS G RVF KK+ GRMG VT+++LE+V Sbjct: 122 GVIKKDGQRRGPMAHG-SRYHRRPGSLGAV--INRVFPGKKLPGRMGNKTVTIQHLEIVK 178 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D + ++LVKG VPGAKK S+++V+ + K+ Sbjct: 179 ADTENNVLLVKGNVPGAKK-SYLVVKSTVKN 208 >gi|110639535|ref|YP_679744.1| 50S ribosomal protein L3 [Cytophaga hutchinsonii ATCC 33406] gi|123163229|sp|Q11QB2|RL3_CYTH3 RecName: Full=50S ribosomal protein L3 gi|110282216|gb|ABG60402.1| LSU ribosomal protein L3P [Cytophaga hutchinsonii ATCC 33406] Length = 206 Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats. Identities = 85/206 (41%), Positives = 124/206 (60%), Gaps = 5/206 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT VY+ G +P TV+ C + +T++ +GY AVQ+ + K K+ + Sbjct: 2 SGIIGKKVGMTSVYDAVGNYVPCTVIEAGPCVITQIKTVETDGYKAVQLAFDDKKEKSTT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121 KP+ G F VSPK+KL EF+ +++ L +G + F G VDV G G+GF Sbjct: 62 KPLLGHFKKAGVSPKRKLVEFKGFENE--LTLGQSLAAQDVFVEGDFVDVVGTAKGRGFQ 119 Query: 122 GAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH FGG THG R GS G P RVFK +MAGRMG NRV ++NL+++ Sbjct: 120 GVVKRHGFGGVGGQTHGQHNRARHAGSIGACSFPARVFKGTRMAGRMGNNRVKIQNLQIL 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 V + L++V G VPG+ KNS++L+ Sbjct: 180 KVYPEHNLLVVSGSVPGS-KNSYVLI 204 >gi|119188359|ref|XP_001244786.1| hypothetical protein CIMG_04227 [Coccidioides immitis RS] Length = 298 Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats. Identities = 99/215 (46%), Positives = 137/215 (63%), Gaps = 3/215 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GM+ V + G+R T+L LD +V+ H+T K+GY AVQVGAG Sbjct: 72 LRTGALAIKKGMSAVIDPETGKRTVCTILQLDRVEVISHKTRQKHGYFAVQVGAGWKHES 131 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV+KPM G F++ VSPK+ + EFRV+ + LLPVG + + +F GQ VDV + G G Sbjct: 132 NVTKPMLGHFAANGVSPKRYVEEFRVRDEAGLLPVGQMINADWFQEGQFVDVRSKSRGMG 191 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKR F G +HGVS++HRS G+TG Q G RV+ KKMAG MG VT++NL Sbjct: 192 FTGVMKRWGFHGQDRSHGVSLTHRSLGTTGPSQGGGSRVYPGKKMAGNMGNTPVTIQNLR 251 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V+ VD ++GL++VKG V G K + + D+ K Sbjct: 252 VLQVDPEKGLVVVKGSV-GGPKGRCVKIHDAIKKP 285 >gi|116624202|ref|YP_826358.1| 50S ribosomal protein L3P [Candidatus Solibacter usitatus Ellin6076] gi|122253082|sp|Q01W92|RL3_SOLUE RecName: Full=50S ribosomal protein L3 gi|116227364|gb|ABJ86073.1| LSU ribosomal protein L3P [Candidatus Solibacter usitatus Ellin6076] Length = 210 Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats. Identities = 81/212 (38%), Positives = 119/212 (56%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVK 59 M G++ +K+GMT ++ +G+ +PVT+L C VV +T +GY AVQ+G E K + Sbjct: 1 MSPGILGKKIGMTQIFRPDGQVVPVTLLKAGPCMVVQRKTPSTDGYDAVQLGLVEFIKPQ 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G V K + EF + D L G F VDV G++ GKG Sbjct: 61 RINKPTAGRLKKAGVEGAKFMREFTLGPGSDDLKTGDQVLVDQFKPKDKVDVVGISKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KRH+F G +HG S+ HR+ GS G P RV +M G +G +VTV+NLEV Sbjct: 121 FAGVVKRHHFRGGEGSHG-SMFHRAPGSIGASSFPSRVVPGMRMGGHLGNAQVTVRNLEV 179 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 + VD + +++VKG VPG ++LVR S + Sbjct: 180 IDVDTEDNVLVVKGAVPGPN-GGYVLVRRSKR 210 >gi|300088197|ref|YP_003758719.1| 50S ribosomal protein L3 [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527930|gb|ADJ26398.1| 50S ribosomal protein L3 [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 207 Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats. Identities = 91/201 (45%), Positives = 124/201 (61%), Gaps = 5/201 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M +G++ +KLGMT VY+ EG+ PVTVL + C VV +T +++GY A Q+G GE K Sbjct: 1 MINGIIGKKLGMTQVYSTEGKMEPVTVLQVGPCTVVQVKTPERDGYTAAQLGFGEDK--K 58 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++K +G + L EFR+ D D + VG+ S F G+ VDVTG++ G+GF Sbjct: 59 LTKAEQGHVKEYGN--FRHLREFRLD-DLDGVEVGARVDASLFVDGERVDVTGISKGRGF 115 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH F G THG S HR+ GS G PGRVFK +MAG MG +VTV L+VV Sbjct: 116 AGTVKRHGFAGGPKTHGQSDRHRAPGSIGATTTPGRVFKGTRMAGHMGNEQVTVSGLKVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKN 201 D ++ L+LVKG VPGA+ Sbjct: 176 KTDVEKNLLLVKGAVPGARNG 196 >gi|330814199|ref|YP_004358438.1| LSU ribosomal protein L3p (L3e) [Candidatus Pelagibacter sp. IMCC9063] gi|327487294|gb|AEA81699.1| LSU ribosomal protein L3p (L3e) [Candidatus Pelagibacter sp. IMCC9063] Length = 272 Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats. Identities = 97/212 (45%), Positives = 137/212 (64%), Gaps = 2/212 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR G+V +K+GMT + G +PVTVL ++ ++V DK GY A+ VG G K Sbjct: 1 MRLGLVGKKIGMTQKFYESGEAVPVTVLQVEPGKIVEVIEKDKRGYSALLVGYGHIKSSK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++K M+GF++ ++ KK L E+RV+ ++ GS + + VD+ TIGKGF Sbjct: 61 LTKSMKGFYAKKSLEAKKFLKEYRVENTEEF-KAGSDVTLDILKDKKYVDIRSKTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR NFGGLRATHGVS+SHRSHGSTG RQDPG+VFK KKMAG MG T++ LE+V Sbjct: 120 AGVMKRWNFGGLRATHGVSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDKFRTMQGLEIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D L+ ++G VPG+ KN+++ + ++ K Sbjct: 180 EADLVNNLLYLRGSVPGS-KNAYVEITEAVKK 210 >gi|261415819|ref|YP_003249502.1| 50S ribosomal protein L3 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372275|gb|ACX75020.1| 50S ribosomal protein L3 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326929|gb|ADL26130.1| ribosomal protein L3 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 205 Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats. Identities = 92/204 (45%), Positives = 125/204 (61%), Gaps = 3/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++A+KLGMT V+ +G +PVTVL C VV H+T +K+GY AVQ+G G K + +K Sbjct: 3 GILAKKLGMTQVFTEQGECVPVTVLEAGPCVVVCHKTEEKDGYTAVQIGFGLKKEQRANK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 G F +V+ ++ L EF V D + PVG F + F + V+V+G++ G GFSG Sbjct: 63 AEVGHFKKADVAVREHLAEFDV-ADLESWPVGKEFGAADFADAKTVNVSGISKGHGFSGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KRH F +HG + R G T PGRVF K+MAG+ G +VTVK+L+VV VD Sbjct: 122 IKRHGFHSGPRSHGTH-NMREPGGTSAHSYPGRVFPGKRMAGQYGNKKVTVKHLQVVKVD 180 Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207 R LI V+G VPG KNS I+VR Sbjct: 181 GDRNLIFVRGAVPGP-KNSIIVVR 203 >gi|212550451|ref|YP_002308768.1| 50S ribosomal protein L3 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|226725128|sp|B6YQ85|RL3_AZOPC RecName: Full=50S ribosomal protein L3 gi|212548689|dbj|BAG83357.1| 50S ribosomal protein L3 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 204 Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats. Identities = 88/205 (42%), Positives = 127/205 (61%), Gaps = 5/205 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++++EG+ +P TV+ + C V +T+DK+GY AVQVG + K K+ +K Sbjct: 3 GLIGKKIGMTSIFSVEGKNLPCTVMEVGPCVVTQVKTVDKDGYEAVQVGFEDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P RG F VS K+ L EF K+ G V + +F G VDV G++ GKGF G Sbjct: 63 PERGHFKRAGVSFKRYLAEF---KEQGKYKEGDVITVDFFNKGIYVDVVGISKGKGFQGV 119 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH F G AT G S R GS G P +VFK +MAG+MG +VT++NLEV+ + Sbjct: 120 VKRHGFRGVGEATLGQSDRQRHPGSIGACSYPAKVFKGTRMAGQMGNTKVTIQNLEVIEL 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 K L++VKG VPG+ K S ++V+ Sbjct: 180 ISKYNLLIVKGSVPGS-KGSILIVK 203 >gi|118411190|ref|YP_874584.1| 50S ribosomal protein L3 [Thalassiosira pseudonana] gi|125987628|sp|A0T0X2|RK3_THAPS RecName: Full=50S ribosomal protein L3, chloroplastic gi|116739937|gb|ABK20807.1| 50S ribosomal protein L3 [Thalassiosira pseudonana] Length = 207 Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats. Identities = 82/206 (39%), Positives = 118/206 (57%), Gaps = 2/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT +++ G IPVT+L + C + +T +GY A+QVG G K Sbjct: 1 MSLGLLGNKIGMTQIFDESGNIIPVTILKVGPCVITQVKTTLNDGYNAIQVGYGNVSTKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G N+ P K L EF V D VG + + F GQL++VTG +IGKGF Sbjct: 61 LTQPQLGHLQKSNIQPLKYLKEFHVS-DPTEFNVGQILNVESFVAGQLINVTGKSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KR+NF THG S +HR+ GS G PGRV KKMAG++G +K L++V Sbjct: 120 SGLQKRYNFARGPMTHG-SKNHRAPGSIGMGTSPGRVLPGKKMAGQLGNKTANIKKLKIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 V++ +++VKG VPG N ++ Sbjct: 179 QVNNDENILVVKGAVPGKPGNLLSII 204 >gi|182412051|ref|YP_001817117.1| ribosomal protein L3 [Opitutus terrae PB90-1] gi|177839265|gb|ACB73517.1| ribosomal protein L3 [Opitutus terrae PB90-1] Length = 216 Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats. Identities = 85/218 (38%), Positives = 124/218 (56%), Gaps = 2/218 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M S ++ +K+GMT VY+ + +PVTV+ C VV +T + +GY AVQ+G + K KN Sbjct: 1 MISSLLGKKIGMTQVYDAQNVLVPVTVVEAGPCAVVQVKTTETDGYNAVQIGFEQKKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S + + +++ ++ + L VG V + + F GQLVDV G+T GKGF Sbjct: 61 ASLAEKNHAAKASLADAPRVLSEVRLEAAPTLKVGDVVNVTAFAEGQLVDVIGVTKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR G A+HG S+ HR GS G RQ PGR +KN+ M G MG + TV+NL VV Sbjct: 121 QGVVKRFRVAGGPASHG-SMFHRRIGSIGMRQTPGRTWKNQAMPGHMGQLKRTVQNLRVV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 + ++ LILVKG +PGA ++VR + K + Sbjct: 180 KIIPEKNLILVKGAIPGAN-GDDVIVRSAIKGQKPAQA 216 >gi|315320564|ref|YP_004072621.1| 50S ribosomal protein L3 [Thalassiosira oceanica CCMP1005] gi|283569037|gb|ADB27574.1| 50S ribosomal protein L3 [Thalassiosira oceanica CCMP1005] Length = 207 Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats. Identities = 87/206 (42%), Positives = 122/206 (59%), Gaps = 2/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT +++ G IPVT+L + C V +T +GY A+QVG G K+ Sbjct: 1 MSLGLLGNKIGMTQIFDESGNIIPVTILKVGPCIVTQVKTTLNDGYNAIQVGYGNVSTKS 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G N+ P K L EFRV + D VG V + F GQL++VTG +IGKGF Sbjct: 61 LTQPQLGHLQKSNIQPLKYLKEFRVNEPAD-FSVGQVLNVDSFIEGQLINVTGKSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KR+NF THG S +HR+ GS G DPGRV KKMAG++G +K L++V Sbjct: 120 SGLQKRYNFSRGPMTHG-SKNHRAPGSIGMGTDPGRVLPGKKMAGQLGNKMTNIKKLKIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 V++ +++VKG VPG N +V Sbjct: 179 QVNNNENILVVKGAVPGKPGNLLSIV 204 >gi|332182016|gb|AEE17704.1| 50S ribosomal protein L3 [Treponema brennaborense DSM 12168] Length = 206 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 88/210 (41%), Positives = 122/210 (58%), Gaps = 5/210 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++A K+GMT V++ +G PVTV+ +D VV +T + GY AV +G G+ K +S Sbjct: 2 KGLIATKVGMTQVFDEDGNLTPVTVIRVDPNVVVACKTKETFGYDAVVLGLGDLKNSQIS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F ++PK+ L EFR + + VG F VDVT + GKGF G Sbjct: 62 KPYAGQFPE-GITPKRHLKEFR--DFSNEVAVGDQIGVELFENTNYVDVTATSKGKGFQG 118 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKR F G RATHG S HR GSTG PG FKN KM G MG R+TV+NL+V+ V Sbjct: 119 VMKRWGFHGGRATHG-SKFHREAGSTGQCTSPGHSFKNIKMPGHMGCERITVQNLKVIKV 177 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D + +++V+G VPG K+ ++++ + K Sbjct: 178 DPELKVVMVRGSVPG-NKDCTLIIKSAVKK 206 >gi|31981470|ref|NP_444389.2| 39S ribosomal protein L3, mitochondrial [Mus musculus] gi|17865553|sp|Q99N95|RM03_MOUSE RecName: Full=39S ribosomal protein L3, mitochondrial; Short=L3mt; Short=MRP-L3 gi|13559357|dbj|BAB40838.1| mitochondrial ribosomal protein L3 (L3mt) [Mus musculus] gi|22028310|gb|AAH34877.1| Mitochondrial ribosomal protein L3 [Mus musculus] gi|26346775|dbj|BAC37036.1| unnamed protein product [Mus musculus] gi|74141933|dbj|BAE41032.1| unnamed protein product [Mus musculus] gi|74216950|dbj|BAE26589.1| unnamed protein product [Mus musculus] gi|148689151|gb|EDL21098.1| mitochondrial ribosomal protein L3, isoform CRA_c [Mus musculus] Length = 348 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 76/221 (34%), Positives = 112/221 (50%), Gaps = 5/221 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R G++A KLGM ++ +G++ VT+L + +C V+ + + + + G V Sbjct: 95 FRVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKIAALTVGGKTVSR 154 Query: 61 VSKP--MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 KP F+ + + PK+ F V D+ ++ G+ ++F GQ VDVT TIGK Sbjct: 155 FYKPDSRLEFYRDLGLPPKQIHKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGK 213 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G MKR F G A+HG + +HR G+ D RV+ KM GRMG TV L+ Sbjct: 214 GFQGVMKRWGFKGQPASHGQTKTHRRPGAI-STGDIARVWPGTKMPGRMGNQNRTVYGLK 272 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 V V+ K +I V G VPG KN + ++DS A K Sbjct: 273 VWRVNTKHNIIYVNGSVPG-HKNCLVKIKDSTLPAYKDSCK 312 >gi|15029810|gb|AAH11128.1| Mitochondrial ribosomal protein L3 [Mus musculus] Length = 348 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 76/221 (34%), Positives = 112/221 (50%), Gaps = 5/221 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R G++A KLGM ++ +G++ VT+L + +C V+ + + + + G V Sbjct: 95 FRVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKIAALTVGGKTVSR 154 Query: 61 VSKP--MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 KP F+ + + PK+ F V D+ ++ G+ ++F GQ VDVT TIGK Sbjct: 155 FYKPDSRLEFYRDLGLPPKQIHKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGK 213 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G MKR F G A+HG + +HR G+ D RV+ KM GRMG TV L+ Sbjct: 214 GFQGVMKRWGFKGQPASHGQTKTHRRPGAI-STGDIARVWPGTKMPGRMGNQNRTVYGLK 272 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 V V+ K +I V G VPG KN + ++DS A K Sbjct: 273 VWRVNTKHNIIYVNGSVPG-HKNCLVKIKDSTLPAYKDSCK 312 >gi|33241161|ref|NP_876103.1| 50S ribosomal protein L3 [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|42559600|sp|Q7V9W2|RL3_PROMA RecName: Full=50S ribosomal protein L3 gi|33238691|gb|AAQ00756.1| Ribosomal protein L3 [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 219 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 75/210 (35%), Positives = 123/210 (58%), Gaps = 3/210 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ +GR IPVT++ C++ ++ +GY AVQ+ G + K Sbjct: 1 MSIGILGKKLGMSQFFDEKGRSIPVTLVEAGPCRITQLKSSATDGYSAVQIAFGAVREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G + + + E+RV KD +G+ + F GQ VDV+G ++G+GF Sbjct: 61 INKPFQGHLAKSGDDLLRYMSEYRV-KDVGEFQLGAQITVGDFEEGQKVDVSGTSMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRH F +HG S +HR GSTG PGR++ K+MAGR GG ++T + L ++ Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLMIM 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 VD + L+++KG +PG S + +R + Sbjct: 179 KVDSDKNLLVIKGSLPGKP-GSLLNIRPAK 207 >gi|313158234|gb|EFR57636.1| 50S ribosomal protein L3 [Alistipes sp. HGB5] Length = 204 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 83/205 (40%), Positives = 120/205 (58%), Gaps = 5/205 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT VY+ EG+ IP TV+ C V +T++K+ Y AVQ+ E K+ S Sbjct: 2 SGLIGKKIGMTSVYSAEGKNIPCTVIEAGPCVVTQIKTVEKDTYEAVQIAYDEKSEKHTS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 + G F +PK+K+ EF+ + + +G + F+ VDVTG++ GKGF G Sbjct: 62 SSLLGHFKKAGTTPKRKMAEFKGMPE---VNLGDTLTVELFSEEDWVDVTGISKGKGFQG 118 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG THG R GS G P RVFK K++ G+MGG +V V NL V+ Sbjct: 119 VVKRHGFGGVGGQTHGQHNRQRKPGSLGASSYPSRVFKGKRLPGQMGGEQVKVLNLRVLK 178 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 V + LILVKG +PGA K +++ + Sbjct: 179 VIPESNLILVKGSIPGA-KGAYLTI 202 >gi|120437174|ref|YP_862860.1| 50S ribosomal protein L3 [Gramella forsetii KT0803] gi|166233147|sp|A0M598|RL3_GRAFK RecName: Full=50S ribosomal protein L3 gi|117579324|emb|CAL67793.1| 50S ribosomal protein L3 [Gramella forsetii KT0803] Length = 203 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 83/205 (40%), Positives = 122/205 (59%), Gaps = 6/205 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G + K V Sbjct: 2 SGLIGKKIGMTSIFDENGKNIPCTVIQAGPCVVTQVRTKEVDGYEALQLGFDDKKT--VG 59 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G K+K+ EF+ +D +G + +F G+ VD+ G + GKGF G Sbjct: 60 KAAEGHAKKAGTVAKRKVVEFQGYNED--YKLGDSVTVEHFKEGEFVDIAGTSKGKGFQG 117 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG +ATHG R+ GS G P RVFK KMAGRMGG RV ++NL V+ Sbjct: 118 VVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGRMGGERVKIENLRVLK 177 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 V + L+++KGCVPG+ KNS++++ Sbjct: 178 VVADKNLLVIKGCVPGS-KNSYVII 201 >gi|242620043|ref|YP_003002047.1| 50S ribosomal protein L3 [Aureococcus anophagefferens] gi|239997288|gb|ACS36811.1| 50S ribosomal protein L3 [Aureococcus anophagefferens] Length = 210 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 82/201 (40%), Positives = 117/201 (58%), Gaps = 2/201 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT + + G +PVT+L C V +T++ +GY A Q+G + K Sbjct: 1 MPLGILGNKIGMTQIVDDLGNLVPVTILRAGPCTVTQIKTVETDGYSAAQLGYAQVTSKV 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP G V + L E+++ D L +G F+ G +VDVTG +IGKGF Sbjct: 61 LTKPQIGHLEKVGAPLLRYLHEYKIS-DTSELSLGQTIGVDIFSAGSVVDVTGKSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KR+NFG THG S +HR+ GS G PGRV+ KKMAG +G +VT+K L+V+ Sbjct: 120 AGLQKRYNFGRGPMTHG-SKNHRAPGSIGAGTTPGRVYPGKKMAGHLGAKQVTIKKLKVL 178 Query: 181 SVDDKRGLILVKGCVPGAKKN 201 VD + LI+VKG VPG N Sbjct: 179 IVDAENNLIIVKGAVPGKPGN 199 >gi|47212780|emb|CAF95545.1| unnamed protein product [Tetraodon nigroviridis] Length = 336 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 80/217 (36%), Positives = 121/217 (55%), Gaps = 4/217 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59 R G+VA KLGM ++ G R VT+L + +C V+ + ++ +G+ A + VG A Sbjct: 84 RVGLVAVKLGMAPIWTKAGERHVVTMLQVQDCHVIKYLPKEEYDGHTAALVVGGKNASPF 143 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 S+ F + V PK+K+ F++ DD L+ G+ ++F GQ VDVT +IGKG Sbjct: 144 YKSEQQMEMFRNAGVPPKQKITTFKIS-DDALIKPGTPLYAAHFRPGQYVDVTAKSIGKG 202 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR F G A+HG + +HR G++G DP +VFK KKM G MG +T L++ Sbjct: 203 FQGVMKRWGFKGQPASHGQTKTHRRPGASGPGGDPAKVFKGKKMPGMMGNIYITAFGLKI 262 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 V+ K ++ V G VPG +N + VRD+ + + Sbjct: 263 WRVNTKYNVLYVHGSVPG-HRNCLLKVRDTVLPSRSS 298 >gi|150020845|ref|YP_001306199.1| 50S ribosomal protein L3 [Thermosipho melanesiensis BI429] gi|166234604|sp|A6LLL3|RL3_THEM4 RecName: Full=50S ribosomal protein L3 gi|149793366|gb|ABR30814.1| ribosomal protein L3 [Thermosipho melanesiensis BI429] Length = 205 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 90/208 (43%), Positives = 125/208 (60%), Gaps = 6/208 (2%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RKLGMT V+ + + +PVTV+ C VV +T++ +GY AVQ+G EAK V+KP Sbjct: 4 IIGRKLGMTRVFVGD-KVVPVTVIKAGPCFVVQKKTIETDGYNAVQLGFEEAK--KVNKP 60 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M G F V+P K L EFRV +D D VG F+ G +D+TG + G+GF+GAM Sbjct: 61 MEGVFKKAGVNPLKVLKEFRV-EDPDKFEVGQEIKVDIFSEGDKIDITGWSKGRGFAGAM 119 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR F G +HG HR GS G +P R+FK KKM G+ G RVT+ N E+V +D Sbjct: 120 KRWGFRGGPKSHGA-KFHRELGSVGQHSEPARIFKGKKMPGQYGNERVTILNSEIVKIDV 178 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212 + LI VKG VPGA + +L++ + + Sbjct: 179 ENNLIAVKGGVPGA-RGGLVLIKSAKRG 205 >gi|325104868|ref|YP_004274522.1| LSU ribosomal protein L3P [Pedobacter saltans DSM 12145] gi|324973716|gb|ADY52700.1| LSU ribosomal protein L3P [Pedobacter saltans DSM 12145] Length = 205 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 83/205 (40%), Positives = 127/205 (61%), Gaps = 4/205 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ EG+ IP TV+ C V +T++ +GY AVQ+ E K KN + Sbjct: 2 SGIIGKKVGMTSIFDAEGKNIPCTVIEAGPCVVTQVKTVETDGYAAVQLAYDEKKEKNTT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 ++G F+ +PK+K+ EF+ + + +G V + F G VDV G + GKGF G Sbjct: 62 AALKGHFAKAGTAPKRKMVEFKYFEVE--KTLGEVVDVTLFEEGDYVDVVGTSKGKGFQG 119 Query: 123 AMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG+ THG R+ GS G P RVFK +MAGR GG+RV ++NL++V Sbjct: 120 VVKRHGFGGVGMQTHGQHNRMRAPGSLGASSFPSRVFKGMRMAGRTGGSRVKIQNLQIVK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 V ++ L++V G +PGA K S++L+ Sbjct: 180 VFAEQNLLVVSGSIPGA-KGSYVLI 203 >gi|206890251|ref|YP_002249245.1| ribosomal protein L3 [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742189|gb|ACI21246.1| ribosomal protein L3 [Thermodesulfovibrio yellowstonii DSM 11347] Length = 205 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 89/202 (44%), Positives = 121/202 (59%), Gaps = 6/202 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVKNV 61 ++ +K+GMT +++ EGR IPVTV+ C +V R+ +KNGY AVQ+G E K KNV Sbjct: 2 KAILGKKIGMTQIFDEEGRIIPVTVIEAGPCWIVQVRSKEKNGYEAVQLGFQEIKKEKNV 61 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP+ G F + P + L EF++ VG + FT G +V + G++ GKG+ Sbjct: 62 PKPLLGIFKKAGIPPCRVLKEFKMTG----FNVGDKVTVEIFTKGDVVSIAGISKGKGYQ 117 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF G THG S+ +R+ GS G P RV+K K MAG MG RVTVKNL +V Sbjct: 118 GVMKRHNFAGGPDTHG-SMFNRAPGSIGASSFPSRVWKGKGMAGHMGNERVTVKNLTIVD 176 Query: 182 VDDKRGLILVKGCVPGAKKNSW 203 V ++ L+LVKG VPG + Sbjct: 177 VIPEQNLLLVKGAVPGGENGIL 198 >gi|81829049|sp|Q6ME63|RL3_PARUW RecName: Full=50S ribosomal protein L3 gi|46399687|emb|CAF23136.1| probable 50S ribosomal protein L3 [Candidatus Protochlamydia amoebophila UWE25] Length = 235 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 77/222 (34%), Positives = 114/222 (51%), Gaps = 10/222 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--- 57 M ++ +K GM +++ +G I TV+ + + +T + +GY A+Q+G + Sbjct: 15 MALTMMGKKRGMIQLFDEKGNAIVCTVIQAEPNVITQIKTKETDGYTALQLGFEKVTGKT 74 Query: 58 ----VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113 KP G F V ++ L E R+ ++ +G S F + VD T Sbjct: 75 QHTIEARTGKPRLGHFKKAGVESRRFLVESRLDSTEE-YTLGQEISVDTFNGIEFVDATA 133 Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 ++ GKG+ G MKRHNF G A+HG S HR GSTG R PGR K AG+MG RVT Sbjct: 134 ISKGKGYQGVMKRHNFAGGPASHG-SGHHRHAGSTGMRSTPGRGLPGGKKAGQMGNERVT 192 Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 V+NL +V VD + +I+VKG VPG +N + + + K A Sbjct: 193 VQNLRIVKVDSENHVIVVKGQVPGP-RNGLVYITQAKKLAKK 233 >gi|225158913|ref|ZP_03725227.1| ribosomal protein L3 [Opitutaceae bacterium TAV2] gi|224802531|gb|EEG20789.1| ribosomal protein L3 [Opitutaceae bacterium TAV2] Length = 215 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 81/215 (37%), Positives = 119/215 (55%), Gaps = 2/215 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M S ++ +K+GMT VY+ + +PVTV+ C VV +T + +GY AVQ+G K KN Sbjct: 1 MISTLLGKKIGMTQVYDAQNVLVPVTVVEAGPCPVVQVKTTETDGYNAVQLGFSVKKAKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 K + + + ++ + L G V + + F GQ+VDV G+T GKGF Sbjct: 61 TPKAEQAHAAKAGLENTPRVLGEVRLNEAPTLKAGDVVTVAAFKEGQIVDVIGITKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G ++R G A+HG S+ HR GS G RQ PGR +KN+KM G MG + TV+NL +V Sbjct: 121 QGVVRRFRVAGGPASHG-SMFHRRIGSIGMRQTPGRSWKNQKMPGHMGSQQRTVQNLTIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 + + L+LVKG +PGA ++VR + K Sbjct: 180 KILADKNLLLVKGAIPGAN-GDDVIVRTAIKGQPK 213 >gi|189501211|ref|YP_001960681.1| 50S ribosomal protein L3 [Chlorobium phaeobacteroides BS1] gi|226725147|sp|B3EP61|RL3_CHLPB RecName: Full=50S ribosomal protein L3 gi|189496652|gb|ACE05200.1| ribosomal protein L3 [Chlorobium phaeobacteroides BS1] Length = 209 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 88/207 (42%), Positives = 119/207 (57%), Gaps = 1/207 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT +YN P TV+ C V +T + +GY A Q+ GE K VSKP Sbjct: 4 ILGKKIGMTSIYNANREAEPCTVIQAGPCFVSQVKTTENDGYEAYQLSIGERKEAKVSKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +RG F+ ++P K+ EF L GS S F+ G V+V G++ GKGF+G + Sbjct: 64 LRGHFAKAGIAPGYKVVEFGKDDMGLDLEQGSAVSVEIFSAGDAVEVQGVSKGKGFAGVV 123 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHNF G + THG S R+ GS G DP R FK KM GRMGG V VK LE+V V Sbjct: 124 KRHNFSGGQRTHGQSDRLRAPGSVGGASDPSRTFKGTKMGGRMGGKTVKVKGLEIVKVIP 183 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211 + L+++KG VPG KNS++ + S K Sbjct: 184 ESNLLVIKGSVPGV-KNSYVQIVSSKK 209 >gi|218440623|ref|YP_002378952.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 7424] gi|226725159|sp|B7KHY7|RL3_CYAP7 RecName: Full=50S ribosomal protein L3 gi|218173351|gb|ACK72084.1| ribosomal protein L3 [Cyanothece sp. PCC 7424] Length = 212 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 89/211 (42%), Positives = 123/211 (58%), Gaps = 4/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT +++ E G IPVTV+H C + +T +GY ++Q+G GE K K Sbjct: 1 MSVGILGTKLGMTQIFDKETGIAIPVTVIHAGPCPITQVKTPATDGYNSIQIGYGEVKEK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++KP G +P + L E+R++ D +G F G LVDV G TIG+G Sbjct: 61 ALNKPKLGHLKKSASTPVRHLKEYRLENAAD-YQLGDGIKVDLFKPGDLVDVAGKTIGRG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G KRHNF THG S +HR GSTG PGRV+ K+MAGR GG +VT++ L V Sbjct: 120 FAGYQKRHNFKRGSMTHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGRYGGTQVTIRKLTV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V +D +R LIL+KG VPG N + + + Sbjct: 179 VQIDTERNLILIKGAVPGKPGN-LLSITPAK 208 >gi|303316364|ref|XP_003068184.1| 54S ribosomal protein L9, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] gi|240107865|gb|EER26039.1| 54S ribosomal protein L9, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] gi|320037921|gb|EFW19857.1| 50S ribosomal protein L3 [Coccidioides posadasii str. Silveira] Length = 291 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 98/215 (45%), Positives = 137/215 (63%), Gaps = 3/215 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GM+ V + G+R T+L LD +V+ H+T K+GY AVQVGAG Sbjct: 72 LRTGALAIKKGMSAVIDPETGKRTVCTILQLDRVEVISHKTRQKHGYFAVQVGAGWKHES 131 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV+KPM G F++ VSPK+ + EFRV+ + LLP+G + + +F GQ VDV + G G Sbjct: 132 NVTKPMLGHFAANGVSPKRYVEEFRVRDEAGLLPIGQMINADWFQEGQFVDVRSKSRGMG 191 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKR F G +HGVS++HRS G+TG Q G RV+ KKMAG MG VT++NL Sbjct: 192 FTGVMKRWGFHGQDRSHGVSLTHRSLGTTGPSQGGGSRVYPGKKMAGNMGNTPVTIQNLR 251 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V+ VD ++GL++VKG V G K + + D+ K Sbjct: 252 VLQVDPEKGLVVVKGSV-GGPKGRCVKIHDAIKKP 285 >gi|303246993|ref|ZP_07333269.1| 50S ribosomal protein L3 [Desulfovibrio fructosovorans JJ] gi|302491700|gb|EFL51583.1| 50S ribosomal protein L3 [Desulfovibrio fructosovorans JJ] Length = 210 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 87/204 (42%), Positives = 118/204 (57%), Gaps = 2/204 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT V+ +G IPVTV+ C V +T +K+GY A+Q+G + V+K Sbjct: 6 GILGRKLGMTRVFGDDGSIIPVTVIEAGPCPVTQVKTEEKDGYNAMQIGFDTIPERKVNK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G + L E R +G + F G+ V +TG +IGKGF+G Sbjct: 66 PEKGHMDKAGRGYFRTLRELRCDGPAAF-ELGMDVTVDIFAPGETVKITGTSIGKGFAGV 124 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF GL+ THG +HRS GS G +PG+V K K+MAG MG VTV ++VV V Sbjct: 125 MKRHNFAGLKKTHGTEKAHRSGGSIGNNTEPGKVMKGKRMAGHMGARTVTVSGIQVVDVR 184 Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207 + LILVKG VPG +N ++VR Sbjct: 185 PEMNLILVKGQVPGP-RNCVVMVR 207 >gi|242624269|ref|YP_003002187.1| 50S ribosomal protein L3 [Aureoumbra lagunensis] gi|239997377|gb|ACS36899.1| 50S ribosomal protein L3 [Aureoumbra lagunensis] Length = 208 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 85/201 (42%), Positives = 118/201 (58%), Gaps = 2/201 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT + + G +PVT+L C V +T++ +GY AVQVG + K Sbjct: 1 MPLGLLGNKIGMTQIVDERGNMVPVTILRAGPCIVTQIKTVEVDGYEAVQVGYNQVSSKF 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP G V V + L E+R+ + + +G S F G LVD+TG TIGKGF Sbjct: 61 LTKPQIGHLEKVGVPLLRYLHEYRIDST-EQVTLGQTISVDMFKSGDLVDITGKTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRHNFG THG S +HR+ GS G PGRV+ KKMAG +G +VT+K L+++ Sbjct: 120 AGLQKRHNFGRGPMTHG-SKNHRAPGSIGAGTTPGRVYPGKKMAGHLGAKKVTIKKLKIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKN 201 VD + LI+V G VPG N Sbjct: 179 FVDAENNLIVVLGSVPGKSGN 199 >gi|157363442|ref|YP_001470209.1| 50S ribosomal protein L3 [Thermotoga lettingae TMO] gi|166990942|sp|A8F4R1|RL3_THELT RecName: Full=50S ribosomal protein L3 gi|157314046|gb|ABV33145.1| ribosomal protein L3 [Thermotoga lettingae TMO] Length = 210 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 82/206 (39%), Positives = 119/206 (57%), Gaps = 7/206 (3%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RK+GMT ++ I IPVTV+ C VV + +GY A+QVG K V+KP Sbjct: 4 ILGRKIGMTRLF-INDVSIPVTVVRAGPCYVVQKKNPQIDGYCAIQVGFEHLK--RVNKP 60 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 + G F V P + L E R++ +++L +G F G+ VD+TG T G+GFSG Sbjct: 61 LEGHFKKAQVKPLRLLREIRLEDENELDSYEIGQEIKLDIFQPGEKVDITGWTKGRGFSG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR F G HG S HR GS G +P ++FK KKM GR G RVT+ NLEV+ + Sbjct: 121 GIKRWGFSGGPRAHG-SKFHRELGSLGQHTEPAKIFKGKKMPGRYGNERVTIHNLEVIKI 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRD 208 D + L+++KG VPGA + S ++++ Sbjct: 180 DLENNLLVLKGSVPGA-RGSLVIIKS 204 >gi|261197061|ref|XP_002624933.1| 50S ribosomal protein L3 [Ajellomyces dermatitidis SLH14081] gi|239595563|gb|EEQ78144.1| 50S ribosomal protein L3 [Ajellomyces dermatitidis SLH14081] gi|239606530|gb|EEQ83517.1| 50S ribosomal protein L3 [Ajellomyces dermatitidis ER-3] gi|327356287|gb|EGE85144.1| 50S ribosomal protein L3 [Ajellomyces dermatitidis ATCC 18188] Length = 301 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 95/215 (44%), Positives = 136/215 (63%), Gaps = 3/215 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GMT +++ G+RIP TVL LD QVV H+TL KNGY AVQVG G + Sbjct: 71 LRTGALAIKKGMTAIFDLETGKRIPCTVLQLDRVQVVAHKTLKKNGYYAVQVGCGWKHER 130 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V++PM G F++ V+PK+ + EFRV+ ++ LLP+G + +F GQ VD + G G Sbjct: 131 AVTRPMLGHFAANGVAPKRHIHEFRVKDENGLLPIGETINADWFQEGQYVDARSNSRGMG 190 Query: 120 FSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKRH F G +HGVS++HR S + RV+ KKMAG MG RVT +NL+ Sbjct: 191 FAGVMKRHGFHGQDRSHGVSLTHRSMGSSGPGQGGGSRVYPGKKMAGNMGNERVTQQNLK 250 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V+ VD ++G+++V G V G K + ++D+ K Sbjct: 251 VLKVDAEKGIVVVNGSVSGP-KGCIVKLQDAIKKP 284 >gi|330470173|ref|YP_004407916.1| 50S ribosomal protein L3 [Verrucosispora maris AB-18-032] gi|328813144|gb|AEB47316.1| 50S ribosomal protein L3 [Verrucosispora maris AB-18-032] Length = 207 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 89/209 (42%), Positives = 123/209 (58%), Gaps = 3/209 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V++ + +PVTV+ C + R DK+GY AVQ+ G + KP+RG ++ Sbjct: 1 MTQVWD-NNKVVPVTVVQAGPCVISQVRDADKDGYSAVQLAYGTIDPRKAKKPLRGHYAK 59 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 +V+P++ + E R D +G + F G +DVTG T GKG++G MKRH F G Sbjct: 60 ADVAPRRHIVELRTSDAAD-YSLGQEITVEEFPAGISIDVTGKTKGKGYAGPMKRHGFHG 118 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 LRA+HGV HRS GS G PGRVFK +MAGRMGG R TV+NL V +VD + L+LV Sbjct: 119 LRASHGVERKHRSPGSIGACATPGRVFKGTRMAGRMGGVRYTVQNLTVQAVDTENNLLLV 178 Query: 192 KGCVPGAKKNSWILVRDSFKSAVNCKGKV 220 +G +PG K + +LVR + K+ G Sbjct: 179 RGAIPGP-KGALVLVRTAAKTKAKKGGAA 206 >gi|269925831|ref|YP_003322454.1| ribosomal protein L3 [Thermobaculum terrenum ATCC BAA-798] gi|269789491|gb|ACZ41632.1| ribosomal protein L3 [Thermobaculum terrenum ATCC BAA-798] Length = 204 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 93/210 (44%), Positives = 125/210 (59%), Gaps = 6/210 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT +++ GR +PVTV+ V +T +++GY AVQ+G E K Sbjct: 1 MVEGLIGKKIGMTHIFDENGRFVPVTVIQAGPNFVTFIKTKERDGYEAVQLGFEEVK--K 58 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + KP RG N+ P + L EF+ + L VG S F G+ VDVTG + GKGF Sbjct: 59 LKKPERGHLK--NLPPLRHLREFKADNISE-LQVGQKVDASIFQAGEKVDVTGTSKGKGF 115 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH FGG THG S HR+ GS G PG+V K ++MAGR GG RVTVK L VV Sbjct: 116 TGVVKRHGFGGGPKTHGQSDRHRAPGSIGATTTPGKVLKGQRMAGRAGGERVTVKRLTVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 +VD R L+LVKG VPGA + +R + Sbjct: 176 AVDTDRNLLLVKGAVPGAN-GGLLQIRKAK 204 >gi|189460684|ref|ZP_03009469.1| hypothetical protein BACCOP_01331 [Bacteroides coprocola DSM 17136] gi|189432643|gb|EDV01628.1| hypothetical protein BACCOP_01331 [Bacteroides coprocola DSM 17136] Length = 205 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 82/204 (40%), Positives = 122/204 (59%), Gaps = 4/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V ++++K+GY AVQVG + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQVGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PK+ L EF+ + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKRHLAEFK--DFSEELNLGDTITVELFNDASYVDVIGTSKGKGFQGV 120 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG + THG R GS G P +VFK +M G+MGG+RVT NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTHNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 + L+L+KG VPG K S +++ Sbjct: 181 IPEHNLLLIKGSVPGC-KGSIVII 203 >gi|171913926|ref|ZP_02929396.1| 50S ribosomal protein L3 [Verrucomicrobium spinosum DSM 4136] Length = 212 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 93/212 (43%), Positives = 125/212 (58%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT VY +G + VTV+ + QVV + DK+GY AVQVG E K Sbjct: 1 MSIGLIGKKVGMTQVYLKDGSAVAVTVIDVAGNQVVQVKNADKDGYTAVQVGYSEKKENR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SKP F N + K + EFR + + GS F G+ VDV G T GKGF Sbjct: 61 CSKPELEHFKKHNATAKYVVREFRTEG--EAPEAGSTLGADKFADGEYVDVIGTTKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG +KR+NF G A+HG S+ HR GS GCR PGRV+KN+KM GR G +R T +NL+VV Sbjct: 119 SGVVKRYNFKGQPASHG-SMMHRRTGSIGCRLTPGRVWKNQKMPGRHGFDRRTTQNLKVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + G++L+ G VPG S+++VR + K Sbjct: 178 QSRAEDGVLLIAGAVPGPN-GSYVIVRPAIKK 208 >gi|121534759|ref|ZP_01666580.1| ribosomal protein L3 [Thermosinus carboxydivorans Nor1] gi|121306779|gb|EAX47700.1| ribosomal protein L3 [Thermosinus carboxydivorans Nor1] Length = 217 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 95/216 (43%), Positives = 132/216 (61%), Gaps = 5/216 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 ++ +KLGMT ++ EG +PVTV+ +V +T++ +GY AVQ+G G K K V Sbjct: 5 TKAILGKKLGMTQIFTAEGHLVPVTVVEAAPNVLVQRKTVETDGYNAVQLGFGAVKDKKV 64 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KPM+G F+ V P + + E R+ + + VG F+ G+LVDVTG GKGF+ Sbjct: 65 TKPMKGHFAKAGVKPVRFIRELRLPSEPE-FQVGQTIGVDIFSDGELVDVTGTGKGKGFA 123 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQD--PGRVFKNKKMAGRMGGNRVTVKNLEV 179 G +KRHNF HG S SHR GS G R G+VFK KK+ GRMGG+RVTV+ L V Sbjct: 124 GGIKRHNFKRGPMAHG-SKSHREPGSMGPRMSGGGGKVFKGKKLPGRMGGHRVTVQRLTV 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 V VD R L+L+KG +PGA K S ++V+++ K A Sbjct: 183 VRVDKDRNLLLIKGAIPGA-KGSLVMVKNTVKPAKK 217 >gi|149632093|ref|XP_001514282.1| PREDICTED: similar to Mitochondrial ribosomal protein L3 [Ornithorhynchus anatinus] Length = 429 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 78/219 (35%), Positives = 116/219 (52%), Gaps = 4/219 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYM-AVQVGAGEAKVKN 60 R G++A KLGM ++ G++ VT+L + +C VV + + G + A+ VG A Sbjct: 178 RVGLIALKLGMMPLWTKNGKKHAVTLLQVQDCHVVKYTPSEGAGKLGALTVGGKNASPFY 237 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S+ + V PK+++ FRV ++ + P G+ ++F GQ VDVT TIGKGF Sbjct: 238 KSEESLEMYREAGVPPKQRIKIFRVTENAKIKP-GTPLYAAHFRPGQYVDVTAKTIGKGF 296 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G MKR F G ATHG + +HR G+ D RV+ KKM G+MG T L+V Sbjct: 297 QGVMKRWGFKGQPATHGQTKTHRRPGAI-STGDIARVWPGKKMPGQMGNRYQTAFGLKVW 355 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 ++ K +I V G VPG K+ ++ +RD+ K K Sbjct: 356 RINTKHNIIYVNGSVPG-HKSCFVKIRDTKLPTYRDKLK 393 >gi|113476579|ref|YP_722640.1| 50S ribosomal protein L3 [Trichodesmium erythraeum IMS101] gi|123056500|sp|Q110A7|RL3_TRIEI RecName: Full=50S ribosomal protein L3 gi|110167627|gb|ABG52167.1| LSU ribosomal protein L3P [Trichodesmium erythraeum IMS101] Length = 227 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 88/224 (39%), Positives = 120/224 (53%), Gaps = 18/224 (8%) Query: 1 MRSGVVARKLGMTCVY-NIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV- 58 M G++ KLGMT V+ G+ IPVTV+ C V +T +GY AVQ+G GEAK Sbjct: 1 MVVGILGTKLGMTQVFEAETGKAIPVTVVEAGPCVVTQIKTEQTDGYTAVQIGYGEAKNK 60 Query: 59 -------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105 + ++ G +P + L E+RV + +G F Sbjct: 61 TRQLNTKEPKEVNRYLTNAQEGHLVKSGGTPLRYLREYRVDNTGNF-ELGQQIKVDLFEA 119 Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165 GQLVDVTG +IGKGF+G KRHNF HG S +HR GSTG PGRV+ KKMAG Sbjct: 120 GQLVDVTGKSIGKGFAGYQKRHNFRRGPMAHG-SKNHRLPGSTGPGTTPGRVYPGKKMAG 178 Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +G RVT + L++V +D +R L+L+KG +PG K + I + + Sbjct: 179 HLGNVRVTTRKLKIVRIDPERNLLLIKGSIPG-KSGTLISIAPA 221 >gi|303237517|ref|ZP_07324082.1| 50S ribosomal protein L3 [Prevotella disiens FB035-09AN] gi|302482337|gb|EFL45367.1| 50S ribosomal protein L3 [Prevotella disiens FB035-09AN] Length = 204 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 82/205 (40%), Positives = 121/205 (59%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G GEAK SK Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTIEKDGYKAVQLGFGEAKESRTSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G F +PKK L EF+ ++ +G + F + VDV G + GKGF G Sbjct: 63 PQQGHFKKAGTTPKKHLAEFKFDEE---YNLGDTITVELFNDTKFVDVVGTSKGKGFQGV 119 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH FGG ++THG R GS G P +VFK +M G MGG+ VT +NL+V+ V Sbjct: 120 MKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGHMGGDTVTTQNLQVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + ++LVKG V G ++ I+ + Sbjct: 180 IPEHNILLVKGSVAGCNGSTLIINK 204 >gi|33862114|ref|NP_893675.1| 50S ribosomal protein L3 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|42559598|sp|Q7UZU7|RL3_PROMP RecName: Full=50S ribosomal protein L3 gi|33634332|emb|CAE20017.1| 50S ribosomal protein L3 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 217 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 81/208 (38%), Positives = 129/208 (62%), Gaps = 3/208 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +G +PVT++ C+V +T +GY A+Q+G G +K K+ Sbjct: 1 MSIGILGKKLGMSQLFDKDGNAVPVTLIEAGPCRVTQLKTQPLDGYTAIQIGYGVSKDKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SKP +G K L E+RV+++ +G + + F VGQ VD++G ++G+GF Sbjct: 61 LSKPEKGHLLKSGEILLKHLKEYRVEENSS-YEIGKEITVTNFEVGQKVDISGKSMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRH F +HG S +HR+ GSTG PGR++ K+MAGR GG ++T K L VV Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKKITTKGLLVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208 +DD++ L++VKG VPG S + ++ Sbjct: 179 KIDDQKNLLVVKGSVPGKP-GSIVNIKP 205 >gi|297621720|ref|YP_003709857.1| 50S ribosomal protein L3 [Waddlia chondrophila WSU 86-1044] gi|297377021|gb|ADI38851.1| 50S ribosomal protein L3 [Waddlia chondrophila WSU 86-1044] Length = 220 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 81/220 (36%), Positives = 123/220 (55%), Gaps = 9/220 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--- 57 M ++ +K GMT +++ +G + TV+ ++ V +T +GY AVQVG + Sbjct: 1 MALKLMGKKRGMTHLFDEKGNVVVCTVIEMEPNVVTQIKTQGTDGYDAVQVGFDKVTTKD 60 Query: 58 ----VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113 + V KP+RG F V P++ + E R+ D VG F + F + +D T Sbjct: 61 PRTMDQRVKKPLRGHFKKAGVEPRRHMLESRLS-DVTGYQVGQEFDVTAFNEVKFIDATA 119 Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 ++IGKGF GAMK H F G+ A+HG +HRS GSTG R PGR F K A +MG +VT Sbjct: 120 ISIGKGFQGAMKLHGFSGMPASHGAKKNHRSLGSTGGRSTPGRCFPGGKRASQMGNRQVT 179 Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++NLE+V + + +++VKG +PG KN + +R + K A Sbjct: 180 IQNLEIVQIIPEENVVVVKGSIPGP-KNGVVTMRQAVKKA 218 >gi|269122581|ref|YP_003310758.1| ribosomal protein L3 [Sebaldella termitidis ATCC 33386] gi|268616459|gb|ACZ10827.1| ribosomal protein L3 [Sebaldella termitidis ATCC 33386] Length = 208 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 90/209 (43%), Positives = 122/209 (58%), Gaps = 4/209 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT ++ + IPVTV+ V+ + ++K+GY A+ +G E K KN KP Sbjct: 2 LLGKKIGMTQIF-EGEKLIPVTVIEAGPNFVIQKKNVEKDGYNALTLGYDEKKEKNTIKP 60 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G F V+PKK L EFR D +G F + VDV+G + GKG +G M Sbjct: 61 EMGVFKKAGVTPKKFLKEFRTDNLDS-YELGQEIKVDSFEGIEFVDVSGTSKGKGTAGVM 119 Query: 125 KRHNFGGLRATHGVSISHRSHGST-GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 KRHNFGG RATHGVS +HR GS G V K KKMAGR+G VTV+NL VV D Sbjct: 120 KRHNFGGNRATHGVSRNHRLGGSNAGGAASNSNVPKGKKMAGRLGNENVTVQNLRVVKFD 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + L+LVKG +PG KN +++++ S K Sbjct: 180 VENNLLLVKGAIPGP-KNGYLVIKKSVKK 207 >gi|262038282|ref|ZP_06011672.1| 50S ribosomal protein L3 [Leptotrichia goodfellowii F0264] gi|261747749|gb|EEY35198.1| 50S ribosomal protein L3 [Leptotrichia goodfellowii F0264] Length = 208 Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 89/209 (42%), Positives = 124/209 (59%), Gaps = 4/209 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT ++ + IPVTV+ VV ++ +K+GY AV + + K KN KP Sbjct: 2 ILGKKIGMTQIF-ENEKLIPVTVIEAGPNFVVQKKSEEKDGYNAVTLAYDDKKEKNTIKP 60 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G F +SPKK L EF+V + + +G F + VD+ G + GKG +G M Sbjct: 61 EMGIFKKAGISPKKFLKEFKVAELESF-ELGQEFKVDVLEGIEFVDIVGTSKGKGTAGVM 119 Query: 125 KRHNFGGLRATHGVSISHRSHGST-GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 KRHNFGG RATHGVS +HR GS G V K KKMAGR+G +VTV+NL+VV D Sbjct: 120 KRHNFGGNRATHGVSRNHRLGGSNAGGAASNSNVPKGKKMAGRLGNEQVTVQNLKVVKFD 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + L+LVKG VPG KN +++++ S K Sbjct: 180 AENNLLLVKGAVPGP-KNGYLVIKKSVKK 207 >gi|149179414|ref|ZP_01857968.1| 50S ribosomal protein L3 [Planctomyces maris DSM 8797] gi|148841725|gb|EDL56134.1| 50S ribosomal protein L3 [Planctomyces maris DSM 8797] Length = 229 Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 86/224 (38%), Positives = 123/224 (54%), Gaps = 20/224 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT +Y+ +G +PVTV+ C V+ RTLD +GY AVQVG + + Sbjct: 1 MPVGLLGKKVGMTQIYD-DGVMVPVTVIQAGPCHVLQVRTLDTDGYEAVQVGFEDKPRRL 59 Query: 61 VSKPMRGFFS-------------------SVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS 101 ++ RG + PK+ + EFR +D VG + S Sbjct: 60 AARSERGHVAALDSKRQKKRAESGVAVVDKAGCEPKRFVKEFRTDGEDHGCEVGGELTVS 119 Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +DV G + G+GF+G MKRHNF G RATHGV HR GS G DP RV K Sbjct: 120 VFADVPFIDVIGTSKGRGFAGVMKRHNFSGQRATHGVKRVHRHGGSIGMSADPSRVLKGT 179 Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWIL 205 +M GR GG ++TV++L+VV VD++ G++LV+G VPG ++ Sbjct: 180 RMGGRYGGKQITVRHLKVVRVDEENGVLLVRGAVPGPNGGDLVI 223 >gi|148689150|gb|EDL21097.1| mitochondrial ribosomal protein L3, isoform CRA_b [Mus musculus] Length = 292 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 76/221 (34%), Positives = 112/221 (50%), Gaps = 5/221 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R G++A KLGM ++ +G++ VT+L + +C V+ + + + + G V Sbjct: 39 FRVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKIAALTVGGKTVSR 98 Query: 61 VSKP--MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 KP F+ + + PK+ F V D+ ++ G+ ++F GQ VDVT TIGK Sbjct: 99 FYKPDSRLEFYRDLGLPPKQIHKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGK 157 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G MKR F G A+HG + +HR G+ D RV+ KM GRMG TV L+ Sbjct: 158 GFQGVMKRWGFKGQPASHGQTKTHRRPGAI-STGDIARVWPGTKMPGRMGNQNRTVYGLK 216 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 V V+ K +I V G VPG KN + ++DS A K Sbjct: 217 VWRVNTKHNIIYVNGSVPG-HKNCLVKIKDSTLPAYKDSCK 256 >gi|27904942|ref|NP_778068.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|42559626|sp|Q89A68|RL3_BUCBP RecName: Full=50S ribosomal protein L3 gi|27904340|gb|AAO27173.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 214 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 84/210 (40%), Positives = 125/210 (59%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +KLGMT ++ EG PVT++ + ++ +T+ ++ Y AVQV G K + Sbjct: 2 MGLIGQKLGMTRIFTEEGTVYPVTIIKVKENRITQIKTISRDLYHAVQVTTGIKKSNKLL 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP G F V K L+EF++ + +G + F+ + VD+ G + GKGF Sbjct: 62 KPEIGHFLKSGVKIGKGLWEFKLTNSSINDFKIGQSLNLELFSNIKKVDIIGTSKGKGFC 121 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR NF ATHG S+SHR+ GS G Q PGRVFK KKMAG +G +RVTV+NL++V Sbjct: 122 GTVKRWNFHTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHLGNHRVTVQNLDIVK 181 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D + +ILVKG VPG + I+++ + K Sbjct: 182 IDLNQEIILVKGAVPGYSGGN-IIIKPAIK 210 >gi|303230114|ref|ZP_07316883.1| 50S ribosomal protein L3 [Veillonella atypica ACS-134-V-Col7a] gi|303231226|ref|ZP_07317964.1| 50S ribosomal protein L3 [Veillonella atypica ACS-049-V-Sch6] gi|302514133|gb|EFL56137.1| 50S ribosomal protein L3 [Veillonella atypica ACS-049-V-Sch6] gi|302515175|gb|EFL57148.1| 50S ribosomal protein L3 [Veillonella atypica ACS-134-V-Col7a] Length = 213 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 98/214 (45%), Positives = 132/214 (61%), Gaps = 5/214 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ +KLGMT V+ EG+ +PVTV+ VV +T++ +GY AVQ+G G K K+ Sbjct: 1 MSKAILGKKLGMTQVFTAEGQLVPVTVVETTPSVVVRVKTVETDGYEAVQIGYGSIKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP++G F V+P K L E RV D VG + F G+LVDV G GKGF Sbjct: 61 LTKPVKGQFDKAGVAPVKYLREVRVDSAAD-YTVGQTLAADIFAEGELVDVVGTGKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KRHNF THG S SHR GS G G+V+K KK+ G+MGG RVTV+ L Sbjct: 120 AGTIKRHNFSRGPETHG-SKSHREPGSIGPMISGGGGKVYKGKKLPGQMGGYRVTVQRLS 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VV VD +R L+LVKG +PGA K S ++VR++ K Sbjct: 179 VVKVDAERNLLLVKGGIPGA-KGSLVMVRNTVKP 211 >gi|283853153|ref|ZP_06370406.1| ribosomal protein L3 [Desulfovibrio sp. FW1012B] gi|283571411|gb|EFC19418.1| ribosomal protein L3 [Desulfovibrio sp. FW1012B] Length = 210 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 86/204 (42%), Positives = 118/204 (57%), Gaps = 2/204 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT ++ +G IPVTV+ C V +T +K+GY A+Q+G + + V+K Sbjct: 6 GILGRKLGMTRIFGDDGSIIPVTVIEAGPCPVTQVKTAEKDGYNAMQIGFDQIPERKVNK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G + L E R+ G + F G+ V VTG +IGKGF+G Sbjct: 66 PEKGHLDKAGRGYYRVLKEIRLDGP-SAFEQGMDVTVDIFAPGETVKVTGTSIGKGFAGV 124 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR NF GL+ THG +HRS GS G +PG+V K KKMAG MG VT+ +E+V V Sbjct: 125 MKRWNFAGLKKTHGTEKAHRSGGSIGNNTEPGKVMKGKKMAGHMGARTVTMLGIEIVDVR 184 Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207 + LILVKG VPG +N ++VR Sbjct: 185 PEMNLILVKGQVPGP-RNCVVMVR 207 >gi|224023618|ref|ZP_03641984.1| hypothetical protein BACCOPRO_00325 [Bacteroides coprophilus DSM 18228] gi|224016840|gb|EEF74852.1| hypothetical protein BACCOPRO_00325 [Bacteroides coprophilus DSM 18228] Length = 205 Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 82/204 (40%), Positives = 122/204 (59%), Gaps = 4/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V ++++K+GY AVQVG + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQVGFQDMKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PK+ L EF+ + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKRHLAEFK--DFSEELNLGDTITVELFNDANYVDVIGTSKGKGFQGV 120 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG + THG R GS G P +VFK +M G+MGG+RVT NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTHNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 + L+L+KG VPG K S +++ Sbjct: 181 IPEHNLLLIKGSVPG-YKGSIVII 203 >gi|194477058|ref|YP_002049237.1| 50S ribosomal protein L3 [Paulinella chromatophora] gi|212288241|sp|B1X508|RK3_PAUCH RecName: Full=50S ribosomal protein L3, organellar chromatophore gi|171192065|gb|ACB43027.1| 50S ribosomal protein L3 [Paulinella chromatophora] Length = 218 Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 82/210 (39%), Positives = 125/210 (59%), Gaps = 3/210 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ ++ EG+ +PVT++ C++ +++D +GY AVQ+G GE + K Sbjct: 1 MSIGILGKKLGMSQFFDEEGKAVPVTLIEAGPCRITQLKSIDTDGYTAVQLGYGETRQKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KP +G + L E+RV+ D L +G+ + F GQ VDV+G ++G+GF Sbjct: 61 VNKPSKGHLARSGEQLLSHLREYRVETIDG-LKLGNSITVEDFKAGQKVDVSGDSMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRH F THG S +HR GSTG PGR++ K+MAGR GG ++T + L +V Sbjct: 120 SGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKQITTRGLVIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 VD L++VKG VPG S + + + Sbjct: 179 KVDTGHNLLVVKGSVPGKP-GSLLNIFPAK 207 >gi|325856043|ref|ZP_08171932.1| 50S ribosomal protein L3 [Prevotella denticola CRIS 18C-A] gi|327313190|ref|YP_004328627.1| 50S ribosomal protein L3 [Prevotella denticola F0289] gi|325483715|gb|EGC86679.1| 50S ribosomal protein L3 [Prevotella denticola CRIS 18C-A] gi|326944923|gb|AEA20808.1| 50S ribosomal protein L3 [Prevotella denticola F0289] Length = 204 Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 84/205 (40%), Positives = 123/205 (60%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G GEAK K SK Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKTVEKDGYKAVQLGFGEAKEKRTSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F +PKK L EF+ ++ +G + F + VDV G + GKGF G Sbjct: 63 PQLGHFKKAGTTPKKHLAEFKFDEE---YNLGDTITVELFNDTKFVDVVGTSKGKGFQGV 119 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG ++THG R GS G P +VFK +M G+MGG+RVT +NL+V+ V Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + L+LVKG V G ++ I+ + Sbjct: 180 IPEHNLLLVKGSVAGCNGSTVIISK 204 >gi|257790717|ref|YP_003181323.1| 50S ribosomal protein L3 [Eggerthella lenta DSM 2243] gi|317488572|ref|ZP_07947117.1| 50S ribosomal protein L3 [Eggerthella sp. 1_3_56FAA] gi|325831933|ref|ZP_08165030.1| 50S ribosomal protein L3 [Eggerthella sp. HGA1] gi|257474614|gb|ACV54934.1| ribosomal protein L3 [Eggerthella lenta DSM 2243] gi|316912314|gb|EFV33878.1| 50S ribosomal protein L3 [Eggerthella sp. 1_3_56FAA] gi|325486254|gb|EGC88706.1| 50S ribosomal protein L3 [Eggerthella sp. HGA1] Length = 206 Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 89/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M + + +K+GMT ++N + R +PVTV+ + + +T D +GY AVQ+G G K K Sbjct: 1 MINAIYGKKIGMTQIFNEDDRVVPVTVIQAEPNTICQVKTKDSDGYEAVQLGFGAIKEKK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM G F+ +P + L E RV+ VG + + F + VDVTG + GKGF Sbjct: 61 VNKPMAGHFAKQGTAPTRYLREVRVEN-AGEYKVGDQQTVAAFAETKKVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR+ F G HG HR+ GS G P RVFK K+ G MG + VTVKNLEVV Sbjct: 120 AGVMKRYGFRGGPGGHGAH-FHRAPGSVGQCATPSRVFKGLKLPGHMGVDTVTVKNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +D+++ LILVKG +PG KN + VR + Sbjct: 179 RIDEEQNLILVKGAIPGG-KNGVVRVRMA 206 >gi|320585734|gb|EFW98413.1| 50S ribosomal protein l3 [Grosmannia clavigera kw1407] Length = 376 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 99/222 (44%), Positives = 138/222 (62%), Gaps = 2/222 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+GV+A K GMT Y+ G RIP TVL L++ QVV +T +GY AVQVG+G + Sbjct: 93 VRTGVLATKRGMTAFYSKSGTRIPCTVLQLEDVQVVATKTRAGHGYWAVQVGSGTRRAAT 152 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ P+ G++ + V+PK L EFRV+ LL G P +F VGQ VD ++ G GF Sbjct: 153 VAAPLLGYYEAKGVAPKAHLAEFRVRDASGLLTPGVALQPDWFHVGQWVDTRSLSRGFGF 212 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179 +GAMK+H F G THG S++HR+ G+TG Q G RV KKM GRMG RVTV+NL V Sbjct: 213 AGAMKKHGFKGQNKTHGNSLNHRTMGTTGPSQGSGSRVMPGKKMPGRMGCERVTVQNLNV 272 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 + VD++ G+++VKG V G K + + ++D+ K V+ Sbjct: 273 LQVDNELGIVVVKGAV-GGPKGALVRLQDAVKKPQPSPAFVA 313 >gi|198274003|ref|ZP_03206535.1| hypothetical protein BACPLE_00139 [Bacteroides plebeius DSM 17135] gi|198273081|gb|EDY97350.1| hypothetical protein BACPLE_00139 [Bacteroides plebeius DSM 17135] Length = 205 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 82/204 (40%), Positives = 122/204 (59%), Gaps = 4/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V ++++K+GY AVQVG + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQVGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PK+ L EF+ + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKRHLAEFK--DFSEELNLGDTITVELFNDTAYVDVIGTSKGKGFQGV 120 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG + THG R GS G P +VFK +M G+MGG+RVT NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTHNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 + L+L+KG VPG K S +++ Sbjct: 181 IPEHNLLLIKGSVPGC-KGSIVII 203 >gi|71842315|ref|YP_277403.1| ribosomal protein L3 [Emiliania huxleyi] gi|109893084|sp|Q4G364|RK3_EMIHU RecName: Full=50S ribosomal protein L3, chloroplastic gi|52547746|gb|AAU81908.1| ribosomal protein L3 [Emiliania huxleyi] gi|60101558|gb|AAX13902.1| ribosomal protein L3 [Emiliania huxleyi] Length = 207 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 89/211 (42%), Positives = 130/211 (61%), Gaps = 5/211 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M +G+ RK+GMT +++ +G IPVT++ D CQV +T +GY A+QVG E K+ Sbjct: 1 MTAGIFGRKIGMTQIFDKDGSAIPVTLVKADPCQVCQIKTTKTDGYDAIQVGYLEEKLSK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SKP++G + +K EFRV +D + +G + S F+VGQ V VTG +IGKGF Sbjct: 61 ISKPIQGHLQKCGSTGYRKFGEFRV-EDPETYNLGDQITTSAFSVGQKVRVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRHNF THG S +HR GS G PGRV+ KKMAG +G + T+KN E++ Sbjct: 120 AGNQKRHNFSRGPMTHG-SKNHRLPGSIGAGSTPGRVYPGKKMAGHLGNTKTTIKNSEIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V +K ++++KG +PG KN ++R + K Sbjct: 179 FVSEKENILILKGSLPGKAKN---ILRIAAK 206 >gi|312899043|ref|ZP_07758427.1| 50S ribosomal protein L3 [Megasphaera micronuciformis F0359] gi|310619828|gb|EFQ03404.1| 50S ribosomal protein L3 [Megasphaera micronuciformis F0359] Length = 212 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 92/214 (42%), Positives = 128/214 (59%), Gaps = 5/214 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ +KLGMT V+ EG +PVTV+ VV +T+D +GY ++Q+G GE K K+ Sbjct: 1 MSKAILGKKLGMTQVFTEEGAVVPVTVVEASPNVVVRVKTVDTDGYNSIQLGYGEIKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP++G F VSP K L E R+ + VG + F G LVDV G T GKGF Sbjct: 61 LTKPVKGQFDKAGVSPVKHLRELRLTDTPE-YTVGQTLAADIFASGDLVDVVGTTKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KRH F HG S SHR GS G G+V K KK+ G+MGGN+ TV +L Sbjct: 120 AGTIKRHGFHRGPMGHG-SKSHREPGSLGPMISGGGGKVIKGKKLPGQMGGNQATVLHLS 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VV VD ++ +IL+KG +PG K S +++RD+ K Sbjct: 179 VVKVDTEKNIILIKGGIPGP-KGSIVMIRDTVKP 211 >gi|296228096|ref|XP_002759663.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like isoform 2 [Callithrix jacchus] Length = 348 Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats. Identities = 80/216 (37%), Positives = 117/216 (54%), Gaps = 5/216 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGY-MAVQVGAGEAKVK 59 R G+VA KLGM ++ +G+R VT+L + +C V+ + + + +G A+ VG Sbjct: 96 RVGLVAVKLGMMPLWTKDGQRHVVTLLQVRDCHVLKYISKENHDGKMAALSVGGKTVSRF 155 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + S + F+ + + PK+K+ FR+ + L P G+ ++F GQ VDVT TIGKG Sbjct: 156 HKSTQILEFYRELGLPPKQKVKIFRITDNAALKP-GTPLYAAHFRPGQYVDVTAKTIGKG 214 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR F G ATHG + +HR G+ D RV+ K+ G+MG TV L+V Sbjct: 215 FQGVMKRWGFKGQPATHGQTKTHRRPGAI-STGDVARVWPGTKLPGQMGNIDRTVHGLKV 273 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++ K +I V G VPG KN + VRDS A Sbjct: 274 WRINTKHNIIYVNGSVPG-HKNCLVKVRDSKLPAYK 308 >gi|157821097|ref|NP_001100322.1| 39S ribosomal protein L3, mitochondrial [Rattus norvegicus] gi|149018711|gb|EDL77352.1| mitochondrial ribosomal protein L3 (predicted), isoform CRA_a [Rattus norvegicus] Length = 348 Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats. Identities = 75/217 (34%), Positives = 115/217 (52%), Gaps = 7/217 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVKN 60 R G++A KLGM ++ +G++ VT+L + +C V+ + + NG A + G Sbjct: 96 RVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKTA-ALTVGGKTGSR 154 Query: 61 VSKP--MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 + KP + F+ + + PK+ + F V D+ ++ G+ ++F GQ VDVT TIGK Sbjct: 155 LYKPNSILEFYRDLGLPPKQTIKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGK 213 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G MKR F G A+HG + +HR G+ D RV+ KM G+MG TV L+ Sbjct: 214 GFQGVMKRWGFKGQPASHGQTKTHRRPGAI-STGDIARVWPGTKMPGQMGNQNRTVYGLK 272 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 V V+ K +I V G VPG +N + ++DS A Sbjct: 273 VWRVNTKHNIIYVNGSVPG-HRNCLVKIKDSTLPAYK 308 >gi|255943633|ref|XP_002562584.1| Pc20g00200 [Penicillium chrysogenum Wisconsin 54-1255] gi|211587319|emb|CAP85349.1| Pc20g00200 [Penicillium chrysogenum Wisconsin 54-1255] Length = 296 Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats. Identities = 95/215 (44%), Positives = 134/215 (62%), Gaps = 3/215 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G + K GMT +Y+ G+RIP TVL LD +V+ H+T +++GY AVQVGAG Sbjct: 68 LRTGAIGIKKGMTAIYDPESGKRIPCTVLQLDRVEVISHKTRERHGYYAVQVGAGWKHPS 127 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 NV+K M G FS +SPK+ +FEFRV+ + L+PVG +F GQ VD T GKG Sbjct: 128 NVTKSMLGHFSVNGISPKRHIFEFRVKDEAGLIPVGQSIEAGWFQEGQFVDARSNTKGKG 187 Query: 120 FSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKRH FGG +HGVS++HR S + RV+ KKMAG MG + TV+NL+ Sbjct: 188 FAGVMKRHGFGGQDRSHGVSLTHRSMGSSGPGQGGGSRVYPGKKMAGNMGNTQNTVQNLK 247 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++ VD + G+++V G V G K + ++D+ K Sbjct: 248 ILKVDSENGIVVVSGAVSGP-KGCVVRIQDAIKKP 281 >gi|118411058|ref|YP_874453.1| 50S ribosomal protein L3 [Phaeodactylum tricornutum] gi|125987627|sp|A0T0H8|RK3_PHATC RecName: Full=50S ribosomal protein L3, chloroplastic gi|116739805|gb|ABK20676.1| 50S ribosomal protein L3 [Phaeodactylum tricornutum] Length = 207 Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats. Identities = 78/209 (37%), Positives = 123/209 (58%), Gaps = 2/209 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT +++ G IPVT+L + C + + K+GY ++Q+G G K Sbjct: 1 MVVGLLGNKIGMTQIFDESGNIIPVTILKVGPCVITQVKNQSKDGYDSIQIGYGNVLSKA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G N+ P K L EFR+ ++ + +G V + FT GQLV++ G +IGKGF Sbjct: 61 LTQPELGHLQKSNIQPLKYLKEFRINQETE-FQIGQVLNVDSFTPGQLVNIQGKSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRHNF THG S +HR+ GS G PGRV KKM+G++G T+K L+++ Sbjct: 120 SGLQKRHNFTRGPMTHG-SKNHRAPGSIGMGTTPGRVLPGKKMSGQLGNKITTIKKLKII 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 ++ + ++++KG VPG N +V + Sbjct: 179 QINSEENILVIKGSVPGKPGNLLSIVPSA 207 >gi|290968244|ref|ZP_06559787.1| 50S ribosomal protein L3 [Megasphaera genomosp. type_1 str. 28L] gi|290781726|gb|EFD94311.1| 50S ribosomal protein L3 [Megasphaera genomosp. type_1 str. 28L] Length = 212 Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats. Identities = 91/214 (42%), Positives = 128/214 (59%), Gaps = 5/214 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ +KLGMT ++ EG +PVTV+ VV +T+D +GY ++Q+G GE K K+ Sbjct: 1 MSKAILGKKLGMTQIFTEEGAVVPVTVVEASPNVVVRVKTVDTDGYNSIQIGYGEVKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP++G F+ V+P K L E R+ + VG + F G LVDV G GKGF Sbjct: 61 LTKPVKGQFAKAGVNPVKYLRELRLTDTPE-YTVGQTLAADIFASGDLVDVIGTGKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KRH F HG S SHR GS G G+V K KK+ G+MGGN+ TV +L Sbjct: 120 AGTIKRHGFHRGPMGHG-SKSHREPGSLGPMISGGGGKVVKGKKLPGQMGGNQATVLHLS 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VV VD + LIL+KG +PGA K S +++RD+ K Sbjct: 179 VVKVDMDKNLILIKGGIPGA-KGSLVMIRDTVKP 211 >gi|206900842|ref|YP_002250701.1| ribosomal protein L3 [Dictyoglomus thermophilum H-6-12] gi|206739945|gb|ACI19003.1| ribosomal protein L3 [Dictyoglomus thermophilum H-6-12] Length = 215 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 80/210 (38%), Positives = 116/210 (55%), Gaps = 4/210 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 ++ RK+GMT ++ G IPVTV+ C V+ +T +K+GY A+Q+G K + Sbjct: 6 TKAILGRKIGMTQIFTDSGELIPVTVIKGGPCLVLNVKTKEKDGYDAIQLGFENCKESKL 65 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F + + P + + E RV+ D G F G+LVD+TG + G GF+ Sbjct: 66 NKPQLGIFKKLGLPPFRIIKEVRVKNPLD-YTRGQEIRVDIFQEGELVDITGKSKGHGFT 124 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F R +HG S HR S G V K +KMAGR G +TV+NL+VV Sbjct: 125 GHIKRWGFRRGRMSHG-SKFHRRRASIGAGG-VQHVMKGQKMAGRWGNETITVQNLKVVK 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD ++ +ILVKG VPG N +++R + K Sbjct: 183 VDKEKDIILVKGAVPGPTGN-LLIIRKAVK 211 >gi|123969297|ref|YP_001010155.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. AS9601] gi|166233179|sp|A2BTD7|RL3_PROMS RecName: Full=50S ribosomal protein L3 gi|123199407|gb|ABM71048.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. AS9601] Length = 217 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 81/208 (38%), Positives = 127/208 (61%), Gaps = 3/208 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +G +PVT++ C+V +T +GY AVQ+G G +K K+ Sbjct: 1 MSIGILGKKLGMSQLFDDKGNSVPVTLIEAGPCRVTQLKTTALDGYTAVQIGYGLSKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SKP +G K L E+RV++ +G + F VGQ VD++G ++G+GF Sbjct: 61 LSKPEKGHLLKSGEELLKHLKEYRVEETSS-YEIGKQITVKNFEVGQKVDISGKSMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F +HG S +HR+ GSTG PGR++ K+MAGR GG ++T K L V+ Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208 +DD++ L++VKG VPG S I ++ Sbjct: 179 KIDDQKNLLVVKGSVPGKP-GSIINIKP 205 >gi|116490658|ref|YP_810202.1| 50S ribosomal protein L3P [Oenococcus oeni PSU-1] gi|290890074|ref|ZP_06553157.1| hypothetical protein AWRIB429_0547 [Oenococcus oeni AWRIB429] gi|122277158|sp|Q04G85|RL3_OENOB RecName: Full=50S ribosomal protein L3 gi|116091383|gb|ABJ56537.1| LSU ribosomal protein L3P [Oenococcus oeni PSU-1] gi|290480265|gb|EFD88906.1| hypothetical protein AWRIB429_0547 [Oenococcus oeni AWRIB429] Length = 247 Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 78/220 (35%), Positives = 115/220 (52%), Gaps = 6/220 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ +G IPVTV+ V+ +T + +GY A+Q+G + + Sbjct: 1 MTKGILGRKVGMTQVFTDKGELIPVTVIEALPNVVLQVKTPETDGYSALQLGVFDKRKIA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +PK+ + E R + D G F G+ VDV G+T G GF Sbjct: 61 ANKPEQGHAKKASAAPKRYVREIRDAQGD--YKQGDKVKVDVFAAGEYVDVQGITKGHGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G++KR HG S HR GS G +VFK K + G+MGG+ T + L V Sbjct: 119 QGSIKRLGQSRGPMAHG-SRYHRRPGSMGSI--INKVFKGKLLPGQMGGDLRTAQKLLVA 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220 VD LIL+KG VPGA K S++ ++ + K K K+ Sbjct: 176 GVDPANNLILIKGNVPGANK-SFVTIKSTVKPFKASKIKL 214 >gi|150003387|ref|YP_001298131.1| 50S ribosomal protein L3 [Bacteroides vulgatus ATCC 8482] gi|212695305|ref|ZP_03303433.1| hypothetical protein BACDOR_04845 [Bacteroides dorei DSM 17855] gi|237711673|ref|ZP_04542154.1| 50S ribosomal protein L3 [Bacteroides sp. 9_1_42FAA] gi|237725885|ref|ZP_04556366.1| 50S ribosomal protein L3 [Bacteroides sp. D4] gi|254881322|ref|ZP_05254032.1| 50S ribosomal protein L3 [Bacteroides sp. 4_3_47FAA] gi|265753093|ref|ZP_06088662.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_33FAA] gi|294777821|ref|ZP_06743265.1| 50S ribosomal protein L3 [Bacteroides vulgatus PC510] gi|319640324|ref|ZP_07995049.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_40A] gi|166233118|sp|A6KYJ5|RL3_BACV8 RecName: Full=50S ribosomal protein L3 gi|149931811|gb|ABR38509.1| 50S ribosomal protein L3 [Bacteroides vulgatus ATCC 8482] gi|212662215|gb|EEB22789.1| hypothetical protein BACDOR_04845 [Bacteroides dorei DSM 17855] gi|229435693|gb|EEO45770.1| 50S ribosomal protein L3 [Bacteroides dorei 5_1_36/D4] gi|229454368|gb|EEO60089.1| 50S ribosomal protein L3 [Bacteroides sp. 9_1_42FAA] gi|254834115|gb|EET14424.1| 50S ribosomal protein L3 [Bacteroides sp. 4_3_47FAA] gi|263236279|gb|EEZ21774.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_33FAA] gi|294448275|gb|EFG16831.1| 50S ribosomal protein L3 [Bacteroides vulgatus PC510] gi|317388099|gb|EFV68953.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_40A] Length = 205 Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 82/204 (40%), Positives = 123/204 (60%), Gaps = 4/204 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V ++++K+GY AVQVG + K K+ +K Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQVGFQDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F V+PK+ L EF+ + + L +G + F VDV G + GKGF G Sbjct: 63 PLMGHFKKAGVTPKRHLAEFKDFETE--LNLGDTITVELFNDAAYVDVVGTSKGKGFQGV 120 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG + THG R GS G P +VFK +M G+MGG+RVT NL+V+ V Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTHNLQVLKV 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 + L+L+KG VPG K S +++ Sbjct: 181 IPEHNLLLIKGSVPGC-KGSIVII 203 >gi|254527207|ref|ZP_05139259.1| ribosomal protein L3 [Prochlorococcus marinus str. MIT 9202] gi|221538631|gb|EEE41084.1| ribosomal protein L3 [Prochlorococcus marinus str. MIT 9202] Length = 217 Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 80/208 (38%), Positives = 128/208 (61%), Gaps = 3/208 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +G +PVT++ C+V +T +GY A+Q+G G +K K+ Sbjct: 1 MSIGILGKKLGMSQLFDDKGNAVPVTLIEAGPCRVTQLKTNALDGYTAIQIGYGVSKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SKP +G K L E+RV++ +G+ + F VGQ VD++G ++G+GF Sbjct: 61 ISKPEKGHLLKSGEELLKHLKEYRVEETSS-YEIGNQITVKNFEVGQKVDISGKSMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRH F +HG S +HR+ GSTG PGR++ K+MAGR GG ++T K L V+ Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208 +DD++ L++VKG VPG S + ++ Sbjct: 179 KIDDQKNLLVVKGSVPGKP-GSIVNIKP 205 >gi|126697087|ref|YP_001091973.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9301] gi|166233175|sp|A3PF47|RL3_PROM0 RecName: Full=50S ribosomal protein L3 gi|126544130|gb|ABO18372.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9301] Length = 217 Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 80/208 (38%), Positives = 128/208 (61%), Gaps = 3/208 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +G +PVT++ C++ +T +GY AVQ+G G +K K+ Sbjct: 1 MSIGILGKKLGMSQLFDEKGNSVPVTLIEAGPCRITQLKTTALDGYTAVQIGYGLSKDKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SKP +G K L E+RV++ +G+ + F VGQ VD++G ++G+GF Sbjct: 61 ISKPEKGHLLKSGEELLKHLKEYRVEETSS-YEIGNQITVKNFEVGQKVDISGKSMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F +HG S +HR+ GSTG PGR++ K+MAGR GG ++T K L V+ Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208 +DD++ L++VKG VPG S I ++ Sbjct: 179 KIDDQKNLLVVKGSVPGKP-GSIINIKP 205 >gi|269798550|ref|YP_003312450.1| ribosomal protein L3 [Veillonella parvula DSM 2008] gi|282849864|ref|ZP_06259247.1| 50S ribosomal protein L3 [Veillonella parvula ATCC 17745] gi|294792794|ref|ZP_06757941.1| 50S ribosomal protein L3 [Veillonella sp. 6_1_27] gi|294794548|ref|ZP_06759684.1| 50S ribosomal protein L3 [Veillonella sp. 3_1_44] gi|313893076|ref|ZP_07826653.1| 50S ribosomal protein L3 [Veillonella sp. oral taxon 158 str. F0412] gi|269095179|gb|ACZ25170.1| ribosomal protein L3 [Veillonella parvula DSM 2008] gi|282580301|gb|EFB85701.1| 50S ribosomal protein L3 [Veillonella parvula ATCC 17745] gi|294454878|gb|EFG23251.1| 50S ribosomal protein L3 [Veillonella sp. 3_1_44] gi|294456693|gb|EFG25056.1| 50S ribosomal protein L3 [Veillonella sp. 6_1_27] gi|313442429|gb|EFR60844.1| 50S ribosomal protein L3 [Veillonella sp. oral taxon 158 str. F0412] Length = 213 Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats. Identities = 98/214 (45%), Positives = 132/214 (61%), Gaps = 5/214 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ +KLGMT V+ EG+ +PVTV+ VV +T++ +GY AVQ+G G K K+ Sbjct: 1 MSKAILGKKLGMTQVFTAEGQLVPVTVVETTPSVVVRVKTVETDGYEAVQIGYGSIKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP++G F V+P K L E RV D VG + F G+LVDV G GKGF Sbjct: 61 LTKPVKGQFDKAGVAPVKYLREVRVANAAD-YTVGQTLAADIFAEGELVDVVGTGKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KRHNF THG S SHR GS G G+V+K KK+ G+MGG RVTV+ L Sbjct: 120 AGTIKRHNFSRGPETHG-SKSHREPGSIGPMISGGGGKVYKGKKLPGQMGGYRVTVQRLS 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VV VD +R L+LVKG +PGA K S ++VR++ K Sbjct: 179 VVKVDAERNLLLVKGGIPGA-KGSLVMVRNTVKP 211 >gi|238810297|dbj|BAH70087.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 276 Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats. Identities = 81/217 (37%), Positives = 121/217 (55%), Gaps = 6/217 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ G +PVTV+ + V + DKNGY+A Q+ GE K Sbjct: 1 MMKGILGRKIGMTQIFTELGASVPVTVIEVQPNVVTKVLSADKNGYVATQIAVGEKKEHR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP++G F+ +PK+ + E R + +G + F G+LVD+TG + GKGF Sbjct: 61 SNKPLKGQFAQAKTTPKRYVKEIRGMQG---YELGQTIKANIFKAGELVDITGTSKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLE 178 +G +KR N +HG + TG D RVFK M G +G R TV+NLE Sbjct: 118 AGTIKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVFKGMTMPGHLGAVRTTVQNLE 177 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +V VD ++LVKG +PGA KNS++++R++ K N Sbjct: 178 IVKVDVANNIMLVKGSIPGA-KNSYVMIREAVKGLPN 213 >gi|300728443|ref|ZP_07061805.1| ribosomal protein L3 [Prevotella bryantii B14] gi|299774362|gb|EFI70992.1| ribosomal protein L3 [Prevotella bryantii B14] Length = 204 Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats. Identities = 88/205 (42%), Positives = 126/205 (61%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G GEAK KN SK Sbjct: 3 GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKNTSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F +PKK L EF+ ++ L +G + F Q VDV G + GKGF G Sbjct: 63 PLMGTFKKAGTTPKKHLAEFKFDEE---LNLGDTLTVEIFNDAQFVDVVGTSKGKGFQGV 119 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG ++THG R GS G P +VFK +M G+MGG+RVT +NL+V+ V Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLKVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + LILVKG V G ++ ++ + Sbjct: 180 IPEHNLILVKGSVAGCNGSTVLIEK 204 >gi|189183951|ref|YP_001937736.1| 50S ribosomal protein L3 [Orientia tsutsugamushi str. Ikeda] gi|189180722|dbj|BAG40502.1| 50S ribosomal protein L3 [Orientia tsutsugamushi str. Ikeda] Length = 227 Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats. Identities = 109/211 (51%), Positives = 145/211 (68%), Gaps = 2/211 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 RSG++A KLGM+ ++ GR++ +T+L +D CQV+ H+ + K+GY AV +G V Sbjct: 16 RSGLIAEKLGMSSKFDENGRKVAITLLKVDVCQVLWHKLVSKDGYNAVILGYKNISPFKV 75 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KPMR FS + PK + EF+V +D +L + S+ SYF VGQ VDV G+TIGKGF+ Sbjct: 76 KKPMRSIFSRAKIEPKAVIKEFKVAEDR-MLEIASILDASYFRVGQYVDVRGITIGKGFA 134 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 GAMKRH F GL A+HGVSISHRSHGSTG R PGR FKNKKMAG MG T++NL+V S Sbjct: 135 GAMKRHGFRGLEASHGVSISHRSHGSTGNRAYPGRTFKNKKMAGHMGVKFATIQNLKVDS 194 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++ L+++KG +PG K S + + DS K Sbjct: 195 VDLEKRLLVIKGSIPG-KSGSIVYITDSIKK 224 >gi|301168458|emb|CBW28048.1| 50S ribosomal protein L3 [Bacteriovorax marinus SJ] Length = 232 Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats. Identities = 86/206 (41%), Positives = 120/206 (58%), Gaps = 2/206 (0%) Query: 7 ARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMR 66 K GMT +++ G +PVTV+ L V +T++ +GY A QVG GE + K V KP + Sbjct: 29 GVKAGMTRIFDENGNHVPVTVVKLIPNIVTQVKTVETDGYEAYQVGYGEKREKLVKKPTK 88 Query: 67 GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKR 126 G NVS F + +G S + FT VDVTG+T GKGF G MKR Sbjct: 89 GHLKKANVSANLTKFAEIKNETVSTDDLGKELSVANFTPETYVDVTGVTKGKGFQGVMKR 148 Query: 127 HNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKR 186 +NF G A+HG HR++GS G R PGRVFK KKM G MG + TV+N++VV V+ ++ Sbjct: 149 YNFAGGPASHGSH-FHRTNGSIGNRATPGRVFKLKKMPGHMGAVKQTVQNVKVVEVNTEK 207 Query: 187 GLILVKGCVPGAKKNSWILVRDSFKS 212 G +L+KG +PG+ KN ++ + + K Sbjct: 208 GYMLIKGSLPGS-KNGFVKIAKALKK 232 >gi|331703716|ref|YP_004400403.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328802271|emb|CBW54425.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 223 Score = 233 bits (596), Expect = 9e-60, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 127/211 (60%), Gaps = 8/211 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+ MT V+ G+ +PVTV+ + V+ +T+D +GY+AVQ+G + +V V+ Sbjct: 2 KGILGRKVEMTQVFTNSGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121 KP G F N +PK+ + E R + +G V + F G+ VDVTG++ GKGF+ Sbjct: 62 KPELGHFKKANSNPKRFVKEIR---NMQGYELGQVINVSDIFVSGEYVDVTGISKGKGFA 118 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHN+ HG S HR GS G R+FK+KKM G MG + T++NLE+++ Sbjct: 119 GGIKRHNYARGPMAHG-SGYHRGIGSMGAI--INRIFKSKKMPGHMGNAKRTIQNLEIIA 175 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D ++L+KG +PG KNS++ ++ + K Sbjct: 176 IDQPNNIMLIKGSIPGP-KNSFVQIKQNIKG 205 >gi|308814220|ref|XP_003084415.1| putative ribosomal protein L3 (ISS) [Ostreococcus tauri] gi|116056300|emb|CAL56683.1| putative ribosomal protein L3 (ISS) [Ostreococcus tauri] Length = 312 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 99/220 (45%), Positives = 128/220 (58%), Gaps = 3/220 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVKN 60 R+G + K GMT ++ G R +TV+ LD +VV D NGY AVQ+G G K K Sbjct: 61 RTGAIGIKCGMTADWDARGCRHALTVVWLDGVEVVRRTGRDGANGYDAVQIGYGARKAKG 120 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G F K+ L EFRV + L P G+V + ++F GQ VDV G T GKGF Sbjct: 121 VTKAELGHFVRHGSGIKRGLKEFRVSRCGTLTP-GTVITAAHFAAGQYVDVGGTTKGKGF 179 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G MKR F G ATHG + HR+HGS G QDPGRVFK KKMAGRMGG R TV++ V Sbjct: 180 QGPMKRWGFAGQPATHGNTKKHRAHGSIGQCQDPGRVFKGKKMAGRMGGRRRTVQSAYVW 239 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220 VD +R L+ +KG +PG + + +RD+ + +V Sbjct: 240 KVDTERNLLYIKGQIPGGA-GTAVTIRDALRKPPKLGEQV 278 >gi|73990569|ref|XP_534263.2| PREDICTED: similar to Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3) [Canis familiaris] Length = 456 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 77/216 (35%), Positives = 115/216 (53%), Gaps = 5/216 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGY-MAVQVGAGEAKVK 59 R G++A KLGM ++ +G+R VT+L + +C V+ + + NG A+ VG Sbjct: 204 RVGLIALKLGMMPLWTKDGKRHVVTLLQVQDCHVLKYTPKENHNGKMAALTVGGKTVSRF 263 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + S + F+ + + PK+K+ F V D+ ++ G+ ++F GQ VDVT TIGKG Sbjct: 264 HKSTSVLEFYQELGLPPKQKVKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 322 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR F G ATHG + +HR G+ D RV+ KM G+MG T L+V Sbjct: 323 FQGVMKRWGFKGQPATHGQTKTHRRPGAI-STGDVARVWPGTKMPGQMGNKDRTEYGLKV 381 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++ K +I V G VPG +N + +RDS A Sbjct: 382 WRINTKNNIIYVNGSVPG-HRNCLVKIRDSNLPAYK 416 >gi|302307337|ref|NP_983967.2| ADL129Wp [Ashbya gossypii ATCC 10895] gi|299788953|gb|AAS51791.2| ADL129Wp [Ashbya gossypii ATCC 10895] Length = 267 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 97/217 (44%), Positives = 145/217 (66%), Gaps = 2/217 (0%) Query: 1 MRSGVVARKLGMTCVYNI-EGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R GV+ RK+GM +++ G R+ TVL ++N +VV+ +T+ NGY A QVG G Sbjct: 50 LRCGVLTRKVGMMPYFDVATGARMAATVLEMNNVEVVLQKTVAANGYWACQVGYGNKHPS 109 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V++ + G F+S V+PK+K+ EFRV+ ++ LLPVG++ PS+F+ GQ VD+ ++ GKG Sbjct: 110 KVTRQLLGHFASKEVNPKEKVTEFRVKNEEGLLPVGTLLKPSFFSPGQYVDLRSVSKGKG 169 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR+NF G +A+HG S+SHR GS G Q PGR+ KKM G MG RVT++N++V Sbjct: 170 FQGVMKRYNFKGQKASHGNSLSHRKGGSYGQNQTPGRILPGKKMPGHMGVQRVTIQNVQV 229 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 + V D +G+I+VKG V G K +++ V+D+ K Sbjct: 230 LEVQDSKGVIIVKGSVAGP-KGAFVKVQDAIKKPPTA 265 >gi|126341656|ref|XP_001379787.1| PREDICTED: similar to Mitochondrial ribosomal protein L3 [Monodelphis domestica] Length = 448 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 75/217 (34%), Positives = 114/217 (52%), Gaps = 5/217 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYM--AVQVGAGEAKV 58 +R G++A KLGM ++ +G++ VT+L + +C V+ + ++ A+ VG Sbjct: 194 VRVGLIAAKLGMMPLWTKDGKKFVVTLLQVQDCHVLKYTPKEECNRNRGALIVGGKNVSP 253 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 S+ + + V V PK+K FRV D+ ++ G+ ++F GQ VDVT TIGK Sbjct: 254 FYKSESLMQMYREVGVPPKQKFSTFRVT-DNAIIKPGTPLYAAHFRPGQYVDVTAKTIGK 312 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G MKR F G A+HG + +HR G+ D RV+ KKM G+MG T L+ Sbjct: 313 GFQGVMKRWGFKGQPASHGQTKTHRRPGAI-ATGDIARVWPGKKMPGKMGNRYRTEFGLK 371 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 V ++ K +I V G VPG +N + +RDS Sbjct: 372 VWRINTKHDIIYVNGSVPG-HRNCLVKIRDSILPPYK 407 >gi|260592765|ref|ZP_05858223.1| 50S ribosomal protein L3 [Prevotella veroralis F0319] gi|260535296|gb|EEX17913.1| 50S ribosomal protein L3 [Prevotella veroralis F0319] Length = 204 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 86/205 (41%), Positives = 124/205 (60%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G GEAK K SK Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G F SPKK L EF+ ++ +G + F + VDV G + GKGF G Sbjct: 63 PQQGHFKKAGTSPKKHLAEFKFDEE---YNLGDTITVELFNDVKFVDVVGTSKGKGFQGV 119 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG ++THG R GS G P +VFK +M G+MGG+RVT +NL+V+ V Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + LILVKG V G ++ I+ + Sbjct: 180 IPEHNLILVKGSVAGCNGSTVIIKK 204 >gi|300812343|ref|ZP_07092778.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496648|gb|EFK31735.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 209 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 120/213 (56%), Gaps = 5/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G +PVTV+ V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGRKVGMTQIFTKDGVLVPVTVIEATPNVVMQVKTVENDGYEAVQLGYQDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G SPK+ + E R + D VGS + F G +V+VTG + G G+ Sbjct: 61 SNKPEKGHADKAKTSPKRFIRELRGVELSD-YEVGSETTVETFKEGDVVNVTGTSRGHGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH+ THG S HR GS G RV K KK+ G MG VT++NL V Sbjct: 120 QGNIKRHHQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKKLPGHMGVKTVTIENLVVE 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V + ++++KG VPGA KNS I+V+ S K++ Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIIVKSSAKAS 208 >gi|94987402|ref|YP_595335.1| 50S ribosomal protein L3 [Lawsonia intracellularis PHE/MN1-00] gi|123385030|sp|Q1MPR3|RL3_LAWIP RecName: Full=50S ribosomal protein L3 gi|94731651|emb|CAJ55014.1| 50S ribosomal protein L3 [Lawsonia intracellularis PHE/MN1-00] Length = 210 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 90/205 (43%), Positives = 127/205 (61%), Gaps = 1/205 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 + G++ +KLGMT V+ G +PVTV+ C +V +T++K GY A+Q+ GE K K+V Sbjct: 4 KIGILGQKLGMTQVFGGNGFAVPVTVVQAGPCPIVQIKTVEKEGYNALQIAFGEGKKKHV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SK M+G FS +S +K+ E R++ VG V + F+VG V +TG +IGKGF Sbjct: 64 SKSMQGHFSKAGLSLYRKIQEVRLKGSLTSYEVGQVLTVGLFSVGDKVKITGKSIGKGFQ 123 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 GAM+R NF G + +HG HR+ GS G PG VFK KKMAG G +VTV+NL VV Sbjct: 124 GAMRRWNFAGSKDSHGCEKVHRAAGSIGNNTFPGHVFKGKKMAGHWGTEKVTVQNLVVVD 183 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 + + +IL+ G VPG KNS++ + Sbjct: 184 IRPEDNIILIHGSVPGP-KNSFLFI 207 >gi|238855068|ref|ZP_04645396.1| 50S ribosomal protein L3 [Lactobacillus jensenii 269-3] gi|256852036|ref|ZP_05557423.1| 50S ribosomal protein L3 [Lactobacillus jensenii 27-2-CHN] gi|260661395|ref|ZP_05862308.1| 50S ribosomal protein L3 [Lactobacillus jensenii 115-3-CHN] gi|260664853|ref|ZP_05865704.1| 50S ribosomal protein L3 [Lactobacillus jensenii SJ-7A-US] gi|282933636|ref|ZP_06339001.1| 50S ribosomal protein L3 [Lactobacillus jensenii 208-1] gi|282934051|ref|ZP_06339333.1| 50S ribosomal protein L3 [Lactobacillus jensenii 208-1] gi|297205089|ref|ZP_06922485.1| 50S ribosomal protein L3 [Lactobacillus jensenii JV-V16] gi|313472595|ref|ZP_07813084.1| 50S ribosomal protein L3 [Lactobacillus jensenii 1153] gi|238832312|gb|EEQ24621.1| 50S ribosomal protein L3 [Lactobacillus jensenii 269-3] gi|256615448|gb|EEU20638.1| 50S ribosomal protein L3 [Lactobacillus jensenii 27-2-CHN] gi|260547850|gb|EEX23827.1| 50S ribosomal protein L3 [Lactobacillus jensenii 115-3-CHN] gi|260561336|gb|EEX27309.1| 50S ribosomal protein L3 [Lactobacillus jensenii SJ-7A-US] gi|281301883|gb|EFA94145.1| 50S ribosomal protein L3 [Lactobacillus jensenii 208-1] gi|281302241|gb|EFA94478.1| 50S ribosomal protein L3 [Lactobacillus jensenii 208-1] gi|297149667|gb|EFH29964.1| 50S ribosomal protein L3 [Lactobacillus jensenii JV-V16] gi|313448952|gb|EFR61270.1| 50S ribosomal protein L3 [Lactobacillus jensenii 1153] Length = 209 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 81/212 (38%), Positives = 118/212 (55%), Gaps = 5/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G +PVTV+ V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGRKVGMTQIFTDKGVLVPVTVIEATPNVVMQVKTVESDGYEAVQLGYQDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G SPK+ + E R + D VGS + F G +VDVTG T G G+ Sbjct: 61 SNKPEKGHADKAKTSPKRFIREIRGVELKD-YEVGSEVTVDTFKEGDVVDVTGTTRGHGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH THG S HR GS G RV K KK+ G MG VT++NL + Sbjct: 120 QGNIKRHGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKKLPGHMGVKTVTIQNLVIE 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V + ++LVKG VPGA K+S I+V+ + K+ Sbjct: 177 KVVADKNVLLVKGNVPGA-KDSLIVVKSATKA 207 >gi|157414163|ref|YP_001485029.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9215] gi|166990938|sp|A8G762|RL3_PROM2 RecName: Full=50S ribosomal protein L3 gi|157388738|gb|ABV51443.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9215] Length = 217 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 80/208 (38%), Positives = 128/208 (61%), Gaps = 3/208 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +G +PVT++ C+V +T +GY A+Q+G G +K K+ Sbjct: 1 MSIGILGKKLGMSQLFDDKGNAVPVTLIEAGPCRVTQLKTNALDGYTAIQIGYGVSKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SKP +G K L E+RV++ +G+ + F VGQ VD++G ++G+GF Sbjct: 61 ISKPEKGHLLKSGEELLKHLKEYRVEETSS-YEIGNQITVKNFEVGQKVDISGKSMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRH F +HG S +HR+ GSTG PGR++ K+MAGR GG ++T K L V+ Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208 +DD++ L++VKG VPG S + ++ Sbjct: 179 KIDDQKNLLVVKGSVPGKP-GSIVNIKP 205 >gi|311748514|ref|ZP_07722299.1| 50S ribosomal protein L3 [Algoriphagus sp. PR1] gi|126577030|gb|EAZ81278.1| 50S ribosomal protein L3 [Algoriphagus sp. PR1] Length = 210 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 83/208 (39%), Positives = 121/208 (58%), Gaps = 5/208 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ +GR + T++ C V + ++ +GY AVQ+ GE K KN Sbjct: 2 SGIIGKKVGMTSIFSADGRNVACTLIEAGPCVVTQVKNVETDGYNAVQLAYGERKEKNTP 61 Query: 63 KPMRGFFSSVNVSPKKK---LFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 KP+ G F +PK+K EFRV+ + + +V S F G VD G + GKG Sbjct: 62 KPLIGHFKKAGTTPKQKVVEFREFRVEFEGQVDLGATVKSSEVFVEGDFVDAIGTSKGKG 121 Query: 120 FSGAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 F G +KRH F G +THG R GS G P RVFK +MAGR GG+RV V NL+ Sbjct: 122 FQGVVKRHGFAGVGGSTHGQHNRQRHPGSIGACSWPSRVFKGMRMAGRTGGDRVKVINLK 181 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILV 206 V+ + ++ L+LV G VPG KNS++++ Sbjct: 182 VLKIYPEQNLLLVSGSVPGP-KNSFVIL 208 >gi|78780035|ref|YP_398147.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9312] gi|109893536|sp|Q318I4|RL3_PROM9 RecName: Full=50S ribosomal protein L3 gi|78713534|gb|ABB50711.1| LSU ribosomal protein L3P [Prochlorococcus marinus str. MIT 9312] Length = 217 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 78/208 (37%), Positives = 128/208 (61%), Gaps = 3/208 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +KLGM+ +++ +G +PVT++ C+V +T +GY AVQ+G G +K K+ Sbjct: 1 MSIGILGKKLGMSQLFDDKGNAVPVTLIEAGPCRVTQLKTTTLDGYSAVQIGYGLSKDKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP +G K L E+RV++ +G+ + F VGQ VD++G ++G+GF Sbjct: 61 INKPEKGHLLKSGEELLKHLKEYRVEETTS-YEIGNQITVKNFEVGQKVDISGKSMGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G KRH F +HG S +HR+ GSTG PGR++ K+MAGR GG ++T K L V+ Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208 +DD++ L+++KG VPG S + ++ Sbjct: 179 KIDDQKNLLVIKGSVPGKP-GSIVNIKP 205 >gi|78189807|ref|YP_380145.1| 50S ribosomal protein L3 [Chlorobium chlorochromatii CaD3] gi|109893419|sp|Q3APH3|RL3_CHLCH RecName: Full=50S ribosomal protein L3 gi|78172006|gb|ABB29102.1| LSU ribosomal protein L3P [Chlorobium chlorochromatii CaD3] Length = 209 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 88/207 (42%), Positives = 123/207 (59%), Gaps = 1/207 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT ++N + + TV+ +C V + DK GY A QV GE K + VSKP Sbjct: 4 ILGKKIGMTRLFNEKREAVSCTVIEAGSCFVTQIKRTDKEGYDAYQVSYGERKEQKVSKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 ++G + V+P L EF + + L VGS S F VG+ V+V G++ GKGF+G + Sbjct: 64 LQGHYKKAGVTPGYTLVEFSFAELNQELAVGSQVSVEGFNVGEKVNVLGVSKGKGFAGVV 123 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR+NFGG THG S R+ GS G DP RVFK +MAGR G +TVKNLE+ V Sbjct: 124 KRYNFGGGSRTHGQSDRLRAPGSVGGSSDPSRVFKGTRMAGRKGSANITVKNLEIFKVMP 183 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211 + LI+VKG +PG NS++ + S K Sbjct: 184 ESNLIVVKGSIPGPN-NSYVKIISSKK 209 >gi|302415769|ref|XP_003005716.1| 54S ribosomal protein L9 [Verticillium albo-atrum VaMs.102] gi|261355132|gb|EEY17560.1| 54S ribosomal protein L9 [Verticillium albo-atrum VaMs.102] Length = 337 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 98/219 (44%), Positives = 141/219 (64%), Gaps = 3/219 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+GV+A K GMT V+ + +R+P TVL LD QV+ RT +GY AVQVG G+ + +N Sbjct: 80 LRTGVLAIKKGMTSVF-VGKKRVPATVLQLDQVQVLASRTRATHGYWAVQVGLGQKEPRN 138 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++P+ G+F + V PK+ + EFRV+ +D LLPVG+ P +F GQ VDV + G+GF Sbjct: 139 VTRPLLGYFEARGVFPKRHIAEFRVKGEDGLLPVGAQLRPDWFQKGQYVDVRSNSRGQGF 198 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179 +G MKRH F G A+HG S +HR+ G+ G Q G RV KKM GRMG + TV+NL V Sbjct: 199 AGGMKRHGFAGQPASHGNSKNHRTMGTAGPSQGSGSRVLPGKKMPGRMGNQQTTVQNLTV 258 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +SVD++ G+++V G V G K + ++D+ K + Sbjct: 259 LSVDNELGIVVVSGPVAGP-KGCVVKLQDAVKRKAPTQP 296 >gi|302036665|ref|YP_003796987.1| 50S ribosomal protein L3 [Candidatus Nitrospira defluvii] gi|300604729|emb|CBK41061.1| 50S ribosomal protein L3 [Candidatus Nitrospira defluvii] Length = 206 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 86/212 (40%), Positives = 119/212 (56%), Gaps = 6/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M +G++ +KLGMT VY+ PVTV+ C+VV +T +++GY AVQ+ GE K + Sbjct: 1 MTNGLLGKKLGMTQVYDES-VLAPVTVIEAGPCRVVSVKTKERDGYEAVQLSFGEVKEQR 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +S+ G +P + L EF D + VG F G VDV G++ GKGF Sbjct: 60 LSRGELGHLKKHQAAPSRWLREFPKVGD---VTVGQTVKVDMFKKGDWVDVVGVSKGKGF 116 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G ++RHN+ G THG S+ HR+ GS G P RV+KNK + G MG RVTV+ L+VV Sbjct: 117 QGVVRRHNYAGGPETHG-SMFHRAPGSIGASSYPSRVWKNKALPGHMGDERVTVQRLKVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 L+ V+G VPG N ++VR S KS Sbjct: 176 DARPDENLLFVRGAVPGGV-NGLLIVRKSKKS 206 >gi|296120747|ref|YP_003628525.1| ribosomal protein L3 [Planctomyces limnophilus DSM 3776] gi|296013087|gb|ADG66326.1| ribosomal protein L3 [Planctomyces limnophilus DSM 3776] Length = 245 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 90/230 (39%), Positives = 128/230 (55%), Gaps = 22/230 (9%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ +G IPVTV+ C V+ RT++++GY AVQ+G + + Sbjct: 14 MSCGLLGRKVGMTQVFTPQGEAIPVTVIECGPCVVLQIRTVERDGYSAVQLGFSDKPRRL 73 Query: 61 VSKPMRGFFS-------------------SVNVSPKKKLFEFRVQKDD-DLLPVGSVFSP 100 S+ RG + + PK+ + EFRV ++ VG V + Sbjct: 74 ASRSERGHVAAIDSKRRKSLAAAGVALAEKADCEPKRFVREFRVTPEEASAFTVGQVLTV 133 Query: 101 S-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159 S F + VDV G + G+GF+G MKRHNF G A+HGV HRS GSTG DPG+VFK Sbjct: 134 SQIFGEVKHVDVVGTSKGRGFAGVMKRHNFHGTCASHGVKKVHRSGGSTGQSTDPGKVFK 193 Query: 160 NKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 KM G G +VTV+ L+VV DD+ ++LV+G VPG ++ VR + Sbjct: 194 GTKMPGHYGDAQVTVRRLQVVRADDENNVLLVRGAVPG-YSGGFVRVRKT 242 >gi|270157910|ref|ZP_06186567.1| ribosomal protein L3 [Legionella longbeachae D-4968] gi|289163830|ref|YP_003453968.1| 50S ribosomal subunit protein L3 [Legionella longbeachae NSW150] gi|269989935|gb|EEZ96189.1| ribosomal protein L3 [Legionella longbeachae D-4968] gi|288857003|emb|CBJ10817.1| 50S ribosomal subunit protein L3 [Legionella longbeachae NSW150] Length = 216 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 93/218 (42%), Positives = 130/218 (59%), Gaps = 3/218 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ +G +PV+V+ + +V +T+ +GY A+Q+ G K Sbjct: 1 MMIGLLGRKIGMTRVFMADGVSVPVSVVEVHPNRVSQVKTITTDGYSAIQLTGGAKKPGK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119 V+KP+ G F+ + L EF V + D G V S FT GQ VDV+G T GKG Sbjct: 61 VNKPLTGHFAKAEIEAGDMLVEFPVDSE-DKFTAGQVISITDVFTAGQFVDVSGTTKGKG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G +KR+NF ATHG S SHR GS G Q PGRVFK KKMAG MG R TV++LE+ Sbjct: 120 FAGTVKRYNFRTQDATHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNVRCTVQSLEL 179 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 V VD +R L+L+KG +PGA + + ++ + K + Sbjct: 180 VRVDAERNLLLIKGAIPGAP-GTRVEIKPAAKKQARGE 216 >gi|282858374|ref|ZP_06267554.1| 50S ribosomal protein L3 [Prevotella bivia JCVIHMP010] gi|282588822|gb|EFB93947.1| 50S ribosomal protein L3 [Prevotella bivia JCVIHMP010] Length = 204 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 83/205 (40%), Positives = 124/205 (60%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G GEAK K SK Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G F +PKK L EF+ ++ +G + F + VDV G + GKGF G Sbjct: 63 PQQGHFKKAGTTPKKHLAEFKFDEE---YNLGDTITVELFNDTKFVDVVGTSKGKGFQGV 119 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG ++THG R GS G P +VFK +M G+MGG+RVT +NL+V+ V Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + ++LVKG V G ++ I+ + Sbjct: 180 IPEHNILLVKGSVAGCNGSTVIIEK 204 >gi|104773542|ref|YP_618522.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116513539|ref|YP_812445.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122275691|sp|Q04C15|RL3_LACDB RecName: Full=50S ribosomal protein L3 gi|122984010|sp|Q1GBL8|RL3_LACDA RecName: Full=50S ribosomal protein L3 gi|103422623|emb|CAI97231.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116092854|gb|ABJ58007.1| LSU ribosomal protein L3P [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325125175|gb|ADY84505.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp. bulgaricus 2038] gi|325684720|gb|EGD26874.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 209 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 120/213 (56%), Gaps = 5/213 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G +PVTV+ V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGRKVGMTQIFTKDGVLVPVTVIEATPNVVMQVKTVENDGYEAVQLGYQDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G SPK+ + E R + D VGS + F G +V+VTG + G G+ Sbjct: 61 SNKPEKGHADKAKTSPKRFIRELRGVELSD-YEVGSEVTVETFKEGDVVNVTGTSRGHGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH+ THG S HR GS G RV K KK+ G MG VT++NL V Sbjct: 120 QGNIKRHHQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKKLPGHMGVKTVTIENLVVE 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V + ++++KG VPGA KNS I+V+ S K++ Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIVVKSSAKAS 208 >gi|307565148|ref|ZP_07627656.1| 50S ribosomal protein L3 [Prevotella amnii CRIS 21A-A] gi|307346179|gb|EFN91508.1| 50S ribosomal protein L3 [Prevotella amnii CRIS 21A-A] Length = 204 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 83/205 (40%), Positives = 125/205 (60%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G GEAK K SK Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P++G F +PKK L EF+ ++ +G + F + VDV G + GKGF G Sbjct: 63 PLQGHFKKAGTTPKKHLAEFKFDEE---YNLGDTITVELFNDTKYVDVVGTSKGKGFQGV 119 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG ++THG R GS G P +VFK +M G+MGG+RVT +NL+V+ V Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + ++LVKG V G ++ I+ + Sbjct: 180 IPEHNILLVKGSVAGCNGSTVIIEK 204 >gi|258591316|emb|CBE67615.1| 50S ribosomal subunit protein L3 [NC10 bacterium 'Dutch sediment'] Length = 210 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 86/208 (41%), Positives = 123/208 (59%), Gaps = 4/208 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG-EAKVK 59 M G++ +K+GMT ++ G +PVT++ C +V RT +GY AVQ+G E K + Sbjct: 1 MGIGLLGKKVGMTQLFGESGNAVPVTIIEAGPCPIVQLRTSSTDGYEAVQIGYRAERKTR 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 ++KP++G F V+P+K L EFR+ +D VG + + F G+ V VTG+T GK Sbjct: 61 RIAKPLKGHFDKAKVTPQKYLREFRLKTQDSSKYTVGEILTVGLFEAGEKVQVTGITKGK 120 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G +KR + G THG S+ HR+ GS G P RVFK M GRMG +R TVK L+ Sbjct: 121 GFQGGVKRWGYLGGPETHG-SMFHRAPGSIGASSFPSRVFKGHHMPGRMGTDRATVKGLQ 179 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILV 206 VV + ++ L+LVKG VPG S + + Sbjct: 180 VVKILPEQNLVLVKGAVPGPA-GSVVTI 206 >gi|116748990|ref|YP_845677.1| 50S ribosomal protein L3 [Syntrophobacter fumaroxidans MPOB] gi|166990941|sp|A0LIJ0|RL3_SYNFM RecName: Full=50S ribosomal protein L3 gi|116698054|gb|ABK17242.1| LSU ribosomal protein L3P [Syntrophobacter fumaroxidans MPOB] Length = 210 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M +V RKL M+ ++ +G +P+T++ C V +T +++GY A+Q+G G K KN Sbjct: 1 MIKAIVGRKLQMSQIFAEDGTAVPITLIQAGPCTVTQVKTPERDGYSALQIGFGSRKPKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+G V + L E R++ D VG + F +G+ +DV G T GKG+ Sbjct: 61 VNKPMKGHLDKVGKGYFEVLREIRMENASDH-EVGEDLAADVFEIGERIDVIGTTKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR F + HG S + R GSTG PGRV K KKM G+ G R TV NL ++ Sbjct: 120 AGTIKRWGFQRGPSGHG-SKNIREPGSTGNATFPGRVIKGKKMPGQKGNKRTTVMNLRII 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V + L++VKG VPG++ N +L+R + ++ Sbjct: 179 DVRPEENLLIVKGAVPGSQ-NGIVLIRKTNRA 209 >gi|90075128|dbj|BAE87244.1| unnamed protein product [Macaca fascicularis] Length = 348 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 78/221 (35%), Positives = 116/221 (52%), Gaps = 5/221 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKV 58 R G++A KLGM ++ +G + VT+L + +C V+ + + + NG A + VG Sbjct: 95 FRVGLIALKLGMMPLWTKDGEKHVVTLLQVQDCHVLKYTSKENHNGKTAALSVGGKTVSR 154 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 + P+ F+ + + PK+ + F + + + P G+ ++F GQ VDVT TIGK Sbjct: 155 FRKATPVLEFYRELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGK 213 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G +KR F G ATHG + +HR G+ D GRV+ KM G+MG T L+ Sbjct: 214 GFQGVVKRWGFKGQPATHGQTKTHRRPGAL-STGDIGRVWPGTKMPGKMGNIYRTAYGLK 272 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 V ++ K +I V G VPG KN + VRDS A GK Sbjct: 273 VWRINTKHNIIYVNGSVPG-HKNCLVKVRDSKLPAYKDLGK 312 >gi|83319916|ref|YP_424660.1| 50S ribosomal protein L3 [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|90110058|sp|P10134|RL3_MYCCT RecName: Full=50S ribosomal protein L3 gi|83283802|gb|ABC01734.1| 50 ribosomal protein L3 [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 223 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 80/217 (36%), Positives = 129/217 (59%), Gaps = 8/217 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+ MT V+ G+ +PVTV+ + V+ +T+D +GY+AVQ+G + +V V+ Sbjct: 2 KGILGRKVEMTQVFTNSGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121 KP G F N +PK+ + E R + +G V + F G+ VDVTG++ GKGF+ Sbjct: 62 KPELGHFKKANSNPKRFVKEIR---NMQGYEIGQVINVSDIFVSGEYVDVTGISKGKGFA 118 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHN+ HG S HR GS G R+FK+KKM G MG + T++NLE+++ Sbjct: 119 GGIKRHNYSRGPMAHG-SGYHRGIGSMGAI--INRIFKSKKMPGHMGNAKRTIQNLEIIA 175 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +D ++L+KG +PG KNS++ ++ + K + + Sbjct: 176 IDQSNNIMLIKGSIPGP-KNSFVQIKQNVKGMSSKQA 211 >gi|281351379|gb|EFB26963.1| hypothetical protein PANDA_011694 [Ailuropoda melanoleuca] Length = 317 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 78/216 (36%), Positives = 116/216 (53%), Gaps = 5/216 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGY-MAVQVGAGEAKVK 59 R G++A KLGM ++ +GR+ VT+L + +C V+ + + NG A+ VG A Sbjct: 66 RVGLIALKLGMMPLWTKDGRKHVVTLLQVQDCHVLKYTPKENHNGKMAALTVGGKTASRF 125 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + S + F+ + + PK+K+ F V D+ ++ G+ ++F GQ VDVT TIGKG Sbjct: 126 HKSTSVLEFYQELGLPPKQKVKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 184 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR F G ATHG + +HR G+ D R++ KM G+MG T L+V Sbjct: 185 FQGVMKRWGFKGQPATHGQTKTHRRPGAI-STGDVARIWPGTKMPGQMGNRDRTAYGLKV 243 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++ K +I V G VPG KN + +RDS A Sbjct: 244 WRINTKHNVIYVNGSVPG-HKNCLVKIRDSNLPAYK 278 >gi|313665577|ref|YP_004047448.1| 50S ribosomal protein L3 [Mycoplasma leachii PG50] gi|312949526|gb|ADR24122.1| 50S ribosomal protein L3 [Mycoplasma leachii PG50] Length = 223 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 80/217 (36%), Positives = 129/217 (59%), Gaps = 8/217 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+ MT V+ G+ +PVTV+ + V+ +T+D +GY+AVQ+G + +V V+ Sbjct: 2 KGILGRKVEMTQVFTNSGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121 KP G F N +PK+ + E R + +G V + F G+ VDVTG++ GKGF+ Sbjct: 62 KPELGHFKKANSNPKRFVKEIR---NMQGYEIGQVINVSDIFVSGEYVDVTGISKGKGFA 118 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHN+ HG S HR GS G R+FK+KKM G MG + T++NLE+++ Sbjct: 119 GGIKRHNYSRGPMAHG-SGYHRGIGSMGAI--INRIFKSKKMPGHMGNAKRTIQNLEIIA 175 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +D ++L+KG +PG KNS++ ++ + K + + Sbjct: 176 IDQTNNIMLIKGSIPGP-KNSFVQIKQNVKGMSSKQA 211 >gi|237755896|ref|ZP_04584489.1| 50S ribosomal protein L3 [Sulfurihydrogenibium yellowstonense SS-5] gi|237691946|gb|EEP60961.1| 50S ribosomal protein L3 [Sulfurihydrogenibium yellowstonense SS-5] Length = 226 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 96/221 (43%), Positives = 132/221 (59%), Gaps = 6/221 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ + G+ IPVTV+ C VV RT +K+GY AV + GE K KN Sbjct: 1 MPKGIIGKKIGMTRVF-VNGKAIPVTVIQAGPCNVVYTRTQEKDGYNAVALAFGERKEKN 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119 KP+ F N+ P K + EF + KD + + +G F G LVD+TG + G+G Sbjct: 60 TPKPLLAIFKKANIKPAKVIKEFPL-KDGETVELGQEIRIENVFEKGDLVDITGKSKGRG 118 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+ MKR +F G +HG HR+ GS GCR +PGRV+K K+MAG G VTV LEV Sbjct: 119 FTSVMKRWDFAGFPKSHG-HRYHRAVGSIGCRTEPGRVWKTKRMAGHYGNETVTVLGLEV 177 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220 V + ++ +ILVKG VPGA NS + ++ S A KGK+ Sbjct: 178 VDIIPEKNVILVKGSVPGAP-NSIVFLKQSV-IANRRKGKL 216 >gi|296228094|ref|XP_002759662.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like isoform 1 [Callithrix jacchus] Length = 376 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 80/216 (37%), Positives = 117/216 (54%), Gaps = 5/216 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGY-MAVQVGAGEAKVK 59 R G+VA KLGM ++ +G+R VT+L + +C V+ + + + +G A+ VG Sbjct: 124 RVGLVAVKLGMMPLWTKDGQRHVVTLLQVRDCHVLKYISKENHDGKMAALSVGGKTVSRF 183 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + S + F+ + + PK+K+ FR+ + L P G+ ++F GQ VDVT TIGKG Sbjct: 184 HKSTQILEFYRELGLPPKQKVKIFRITDNAALKP-GTPLYAAHFRPGQYVDVTAKTIGKG 242 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR F G ATHG + +HR G+ D RV+ K+ G+MG TV L+V Sbjct: 243 FQGVMKRWGFKGQPATHGQTKTHRRPGAI-STGDVARVWPGTKLPGQMGNIDRTVHGLKV 301 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++ K +I V G VPG KN + VRDS A Sbjct: 302 WRINTKHNIIYVNGSVPG-HKNCLVKVRDSKLPAYK 336 >gi|256383913|gb|ACU78483.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. capri str. GM12] gi|256384744|gb|ACU79313.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. capri str. GM12] gi|296455991|gb|ADH22226.1| 50S ribosomal protein L3 [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 223 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 127/211 (60%), Gaps = 8/211 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+ MT V+ G+ +PVTV+ + V+ +T+D +GY+AVQ+G + +V V+ Sbjct: 2 KGILGRKVEMTQVFTSAGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121 KP G F N +PK+ + E R + +G V + F G+ VDVTG++ GKGF+ Sbjct: 62 KPELGHFKKANSNPKRFVKEIR---NMQGYELGQVINVSDIFVSGEYVDVTGISKGKGFA 118 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHN+ HG S HR GS G R+FK+KKM G MG + T++NLE+++ Sbjct: 119 GGIKRHNYARGPMAHG-SGYHRGIGSMGAI--INRIFKSKKMPGHMGNAKRTIQNLEIIA 175 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D ++L+KG +PG KNS++ ++ + K Sbjct: 176 IDQPNNIMLIKGSIPGP-KNSFVQIKQNIKG 205 >gi|212704583|ref|ZP_03312711.1| hypothetical protein DESPIG_02645 [Desulfovibrio piger ATCC 29098] gi|212671982|gb|EEB32465.1| hypothetical protein DESPIG_02645 [Desulfovibrio piger ATCC 29098] Length = 209 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 83/206 (40%), Positives = 119/206 (57%), Gaps = 2/206 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 + G++ RKLGMT ++ +G +PVTV+ C V +T++ +GY A+Q+ E K K+V Sbjct: 4 KMGILGRKLGMTRIFAGDGAAVPVTVIQAGPCPVTQVKTVETDGYNALQIALTEDKEKHV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SK M+G F+ ++L E R++ ++ P G + F G +V VT +IGKG+ Sbjct: 64 SKAMKGHFAKAGTGLYRELREIRLENAPEMEP-GQELTVEMFATGDVVKVTAKSIGKGYQ 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G M+R NF G + THG HR++GS G PG VFK +KMAG G VT L +V Sbjct: 123 GRMRRWNFAGSKDTHGCEKVHRNNGSIGNNTFPGHVFKGRKMAGHWGNETVTEMGLVIVD 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V +ILVKG VPG KN +L+R Sbjct: 183 VRPADNVILVKGSVPGP-KNGLVLIR 207 >gi|328949277|ref|YP_004366614.1| 50S ribosomal protein L3 [Treponema succinifaciens DSM 2489] gi|328449601|gb|AEB15317.1| 50S ribosomal protein L3 [Treponema succinifaciens DSM 2489] Length = 206 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 88/210 (41%), Positives = 124/210 (59%), Gaps = 5/210 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++A+K+GMT V++ G PVTV+ ++ VV +T +K GY AV +G + K ++ Sbjct: 2 KGLIAKKVGMTQVFDENGNLTPVTVIRVEPNTVVATKTQEKCGYEAVVLGLEDLKPHKIT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP F N++PK+ L EFR + + VG F + +DVT + GKGF G Sbjct: 62 KPYAKQFPE-NITPKRHLKEFR--DFEGEVKVGDQIGVELFEKVRFIDVTATSKGKGFQG 118 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKR F G RATHG S HR G TGC PG KN KM GRMG +RVTV+NL+VV V Sbjct: 119 VMKRWGFHGGRATHG-SKFHREAGGTGCCTTPGHCLKNVKMPGRMGFDRVTVQNLKVVKV 177 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D + +++V+G VPG +N ++V+ + K Sbjct: 178 DPELNVLMVRGAVPGV-RNCTLIVKAAVKK 206 >gi|257125036|ref|YP_003163150.1| ribosomal protein L3 [Leptotrichia buccalis C-1013-b] gi|257048975|gb|ACV38159.1| ribosomal protein L3 [Leptotrichia buccalis C-1013-b] Length = 208 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 84/209 (40%), Positives = 124/209 (59%), Gaps = 4/209 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT ++ + + IPVTV+ + +T +K GY A+ + G+ + KN +KP Sbjct: 2 ILGKKIGMTQIF-EDEKLIPVTVIEAGTNFITQIKTEEKEGYNAITLAYGDKREKNTTKP 60 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G F V+PK+ L EF+V D +G + VD++G + GKG +G M Sbjct: 61 ELGIFKKAGVTPKRFLKEFKVANPAD-FALGQEIKVDVLEGIEFVDISGTSKGKGTAGVM 119 Query: 125 KRHNFGGLRATHGVSISHRSHGST-GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 KRHNFGG RA+HGVS +HR GS G V K KKMAGR+G +VTV+NL+V+ D Sbjct: 120 KRHNFGGNRASHGVSRNHRLGGSNAGGAASNSNVPKGKKMAGRLGAEKVTVQNLQVIKFD 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + L+LVKG VPG KN +++++ S K Sbjct: 180 VENSLLLVKGAVPGP-KNGYLVIKKSVKK 207 >gi|42559578|sp|P60457|RL3_SPIKU RecName: Full=50S ribosomal protein L3 gi|34849393|gb|AAP58892.1| ribosomal protein L3 [Spiroplasma kunkelii CR2-3x] Length = 258 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 81/210 (38%), Positives = 132/210 (62%), Gaps = 6/210 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT ++ +GR IPVTV+ +++ V+ T ++NGY A+Q+ + ++ VS Sbjct: 2 KGILGRKIGMTQIFATDGRLIPVTVVEVEHNIVLRVLTKEQNGYQALQLAVEDKRISLVS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP +G F N +PK+ + E R + D G + FT G+ VDVTG + GKGF+G Sbjct: 62 KPDQGQFKKANTTPKRFVKEIR---NMDGYNSGDIIKADIFTAGEFVDVTGTSKGKGFTG 118 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 ++KRHN+ HG S HR GS G P R+ K+KKM G +G +VT++NLE++++ Sbjct: 119 SIKRHNYSRGPMGHG-SGYHRGVGSMGAIA-PNRILKSKKMPGHIGTEKVTIQNLEIIAI 176 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D ++ +LVKG +PG KK +++++++ K Sbjct: 177 DTEKNALLVKGSIPGPKK-QFVVIKEAIKG 205 >gi|238018623|ref|ZP_04599049.1| hypothetical protein VEIDISOL_00458 [Veillonella dispar ATCC 17748] gi|237865094|gb|EEP66384.1| hypothetical protein VEIDISOL_00458 [Veillonella dispar ATCC 17748] Length = 213 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 97/214 (45%), Positives = 131/214 (61%), Gaps = 5/214 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ +KLGMT V+ EG+ +PVTV+ VV +T++ +GY AVQ+G G K K+ Sbjct: 1 MSKAILGKKLGMTQVFTAEGQLVPVTVVETTPSVVVRVKTVETDGYEAVQIGYGSIKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP++G F V+P K L E RV D VG + F G+LVDV G GKGF Sbjct: 61 LTKPVKGQFDKAGVAPVKYLREVRVANAAD-YTVGQTLAADIFAEGELVDVVGTGKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KRHNF THG S SHR GS G G+V+K KK+ G+MGG RVTV+ L Sbjct: 120 AGTIKRHNFSRGPETHG-SKSHREPGSIGPMISGGGGKVYKGKKLPGQMGGYRVTVQRLS 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD +R L+LVKG +PGA K S ++VR++ K Sbjct: 179 VEKVDAERNLLLVKGGIPGA-KGSLVMVRNTVKP 211 >gi|161611308|ref|YP_007411.2| 50S ribosomal protein L3 [Candidatus Protochlamydia amoebophila UWE25] Length = 221 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 77/222 (34%), Positives = 114/222 (51%), Gaps = 10/222 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--- 57 M ++ +K GM +++ +G I TV+ + + +T + +GY A+Q+G + Sbjct: 1 MALTMMGKKRGMIQLFDEKGNAIVCTVIQAEPNVITQIKTKETDGYTALQLGFEKVTGKT 60 Query: 58 ----VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113 KP G F V ++ L E R+ ++ +G S F + VD T Sbjct: 61 QHTIEARTGKPRLGHFKKAGVESRRFLVESRLDSTEE-YTLGQEISVDTFNGIEFVDATA 119 Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 ++ GKG+ G MKRHNF G A+HG S HR GSTG R PGR K AG+MG RVT Sbjct: 120 ISKGKGYQGVMKRHNFAGGPASHG-SGHHRHAGSTGMRSTPGRGLPGGKKAGQMGNERVT 178 Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 V+NL +V VD + +I+VKG VPG +N + + + K A Sbjct: 179 VQNLRIVKVDSENHVIVVKGQVPGP-RNGLVYITQAKKLAKK 219 >gi|291411673|ref|XP_002722112.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like [Oryctolagus cuniculus] Length = 348 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 78/216 (36%), Positives = 114/216 (52%), Gaps = 5/216 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGY-MAVQVGAGEAKVK 59 R G++A KLGM ++ +G R VT+L + +C V+ + + + NG A+ VG Sbjct: 96 RVGLIALKLGMMPLWTKDGHRHVVTLLQVQDCHVLKYTSKENHNGKMAALTVGGKTVSRF 155 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 S + F+ + + PK+K+ F V D+ ++ G+ ++F GQ VDVT TIGKG Sbjct: 156 RKSTSVLEFYQELGLPPKQKVKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTARTIGKG 214 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR F G ATHG + +HR G+ D RV+ KM G+MG T L+V Sbjct: 215 FQGVMKRWGFKGQPATHGQTKTHRRPGAI-STGDVARVWPGTKMPGQMGNIDRTAYGLKV 273 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++ K +I V G VPG KN + V+DS A Sbjct: 274 WRINTKHNIIYVNGSVPG-HKNCLVKVKDSKLPAYK 308 >gi|317476356|ref|ZP_07935605.1| 50S ribosomal protein L3 [Bacteroides eggerthii 1_2_48FAA] gi|316907382|gb|EFV29087.1| 50S ribosomal protein L3 [Bacteroides eggerthii 1_2_48FAA] Length = 195 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 81/196 (41%), Positives = 118/196 (60%), Gaps = 4/196 (2%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V++ EG+ +P TV+ C V +T++K+GY AVQ+G + K K+ +KP+ G F Sbjct: 1 MTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYQAVQLGFQDKKEKHTTKPLMGHFKK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 V+PKK L EF+ + + L +G + F VDV G + GKGF G +KRH FGG Sbjct: 61 AGVTPKKHLAEFK--EFETELNLGDTVTVELFEGADFVDVVGTSKGKGFQGVVKRHGFGG 118 Query: 132 -LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190 + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V + L+L Sbjct: 119 VGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKVIAEHNLLL 178 Query: 191 VKGCVPGAKKNSWILV 206 +KG VPG K S +++ Sbjct: 179 IKGSVPGC-KGSIVII 193 >gi|32491292|ref|NP_871546.1| hypothetical protein WGLp543 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|42559632|sp|Q8D212|RL3_WIGBR RecName: Full=50S ribosomal protein L3 gi|25166499|dbj|BAC24689.1| rplC [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 215 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 90/208 (43%), Positives = 133/208 (63%), Gaps = 2/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT +N +G IPVTV+ + + ++V + ++K+GY ++QV G K +K Sbjct: 3 GLIGRKIGMTRTFNSDGSSIPVTVIKISDNKIVQIKKIEKDGYSSIQVTTGVKKFSRENK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 + G F V + L+EF+V K+ VG V S + F V++TG++ GKGFSG Sbjct: 63 SIIGHFKKNKVELGRGLWEFKVDKNSKFY-VGQVLSINTFININKVNITGISKGKGFSGT 121 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR NF G A+HG S+SHR+ GS G Q PG+VFK KKM+G +G N+ TVKNL VV +D Sbjct: 122 MKRWNFHGQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMSGHLGYNKNTVKNLFVVKID 181 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 + L+L+KG VPG+ K S ++++ K Sbjct: 182 LEHELLLIKGSVPGS-KGSDLIIKPVVK 208 >gi|297623274|ref|YP_003704708.1| 50S ribosomal protein L3 [Truepera radiovictrix DSM 17093] gi|297164454|gb|ADI14165.1| 50S ribosomal protein L3 [Truepera radiovictrix DSM 17093] Length = 206 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 89/211 (42%), Positives = 122/211 (57%), Gaps = 7/211 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ K+GMT V+ + R +PVTV+ C VV +T + +GY AVQ+G + K + Sbjct: 2 KGLLGTKVGMTQVWQGD-RLVPVTVVLAGPCPVVQRKTPETDGYSAVQLGWIAKRDKVAT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G VS ++ L EFR D P G + F GQ VDVTG + G+G +G Sbjct: 61 KPELGHAKKAGVSAQRHLVEFR-----DYDPEGDTVTVEIFKPGQKVDVTGTSKGRGTAG 115 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKR NF GL A+HGV HR+ GS G R+ PGRV+K K+MAGR G RVT LE++ V Sbjct: 116 VMKRWNFAGLPASHGVKKKHRAPGSIGQRKFPGRVYKGKRMAGRYGNERVTTLGLELLEV 175 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 L+L+KG +PGA ++V+ S + A Sbjct: 176 RPDDNLLLIKGSIPGAN-GGLVVVKASTRGA 205 >gi|297569422|ref|YP_003690766.1| 50S ribosomal protein L3 [Desulfurivibrio alkaliphilus AHT2] gi|296925337|gb|ADH86147.1| 50S ribosomal protein L3 [Desulfurivibrio alkaliphilus AHT2] Length = 210 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 85/206 (41%), Positives = 119/206 (57%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GMT +++ G IPVTV+ C V+ +TL K GY A+QVG G K + ++ Sbjct: 5 MGLLGKKMGMTRIFSETGTAIPVTVIEAGPCVVLQKKTLAKEGYNAIQVGFGAKKEQRLN 64 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKGFS 121 KP +G + + EFRV D D +G S F VG+LVDV + G+GF Sbjct: 65 KPEKGHAKAAGKGGFYHIKEFRV-ADPDAYELGQEISMTEIFNVGELVDVRARSKGRGFQ 123 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRH F G RATHG S+ HR G+ GC P RV K KKM G+MG VT KN +V Sbjct: 124 GVVKRHGFKGGRATHG-SMFHRRPGAIGCSAWPSRVIKGKKMPGQMGDQFVTKKNCTIVD 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 + ++ +++VKG VPGA K + + Sbjct: 183 IRPEQNVLVVKGGVPGA-KEGLVQIY 207 >gi|161506873|ref|YP_001576827.1| 50S ribosomal protein L3 [Lactobacillus helveticus DPC 4571] gi|260102355|ref|ZP_05752592.1| 50S ribosomal protein L3 [Lactobacillus helveticus DSM 20075] gi|172048367|sp|A8YXK5|RL3_LACH4 RecName: Full=50S ribosomal protein L3 gi|160347862|gb|ABX26536.1| 50S ribosomal protein L3 [Lactobacillus helveticus DPC 4571] gi|260083799|gb|EEW67919.1| 50S ribosomal protein L3 [Lactobacillus helveticus DSM 20075] gi|323465824|gb|ADX69511.1| 50S ribosomal protein L3 [Lactobacillus helveticus H10] gi|328463364|gb|EGF35037.1| 50S ribosomal protein L3 [Lactobacillus helveticus MTCC 5463] Length = 212 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 77/217 (35%), Positives = 119/217 (54%), Gaps = 5/217 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G +PVTV+ V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGRKVGMTQIFTKDGVLVPVTVVEATPNVVMQVKTVESDGYEAVQLGYQDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G SPK+ + E R + D VGS + F G +V+VTG + G G+ Sbjct: 61 SNKPEKGHADKAKTSPKRFIREIRGVELKD-YEVGSEVTVDTFKEGDVVNVTGTSRGHGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR THG S HR GS G RV K K++ G MG +VT++NL + Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKRLPGHMGMKKVTIENLVIE 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 V + ++++KG VPGA KNS I+V+ + K+ K Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIVVKTASKAVKADK 212 >gi|42561270|ref|NP_975721.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|81829359|sp|Q6MSM6|RL3_MYCMS RecName: Full=50S ribosomal protein L3 gi|42492768|emb|CAE77363.1| 50S RIBOSOMAL PROTEIN L3 [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320560|gb|ADK69203.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 223 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 128/211 (60%), Gaps = 8/211 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+ MT V+ G+ +PVTV+ + V+ +T+D +GY+AVQ+G + +V V+ Sbjct: 2 KGILGRKVEMTQVFTSAGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121 KP G F N +PK+ + E R + +G V + F G+ VDVTG++ GKGF+ Sbjct: 62 KPELGHFKKANSNPKRFVKEIR---NMQGYELGQVINVSDIFVSGEYVDVTGISKGKGFA 118 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHN+ HG S HR GS G R+FK+KKM G MG + T++NLE+++ Sbjct: 119 GGIKRHNYARGPMAHG-SGYHRGIGSMGAI--INRIFKSKKMPGHMGNAKRTIQNLEIIA 175 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D ++L+KG +PG+ KNS++ ++ + K Sbjct: 176 IDQPNNIMLIKGSIPGS-KNSFVQIKQNIKG 205 >gi|301300208|ref|ZP_07206420.1| 50S ribosomal protein L3 [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852149|gb|EFK79821.1| 50S ribosomal protein L3 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 195 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 76/200 (38%), Positives = 113/200 (56%), Gaps = 5/200 (2%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V+ G +PVTV+ +D+ V+ +T++ +GY A+Q+G + + +KP +G + Sbjct: 1 MTQVFTENGELVPVTVVKVDSNVVLQVKTMENDGYEAIQLGFDDLREVLTNKPAKGHAAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 N +PK+ + E R + VG F G VDVTG + G GF G++KR+ Sbjct: 61 ANTTPKRFVREIR-DVELGEYKVGDEVKADIFEAGDFVDVTGTSKGHGFQGSIKRNGQHR 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 HG S HR GS G RV K K + GRMGGNRVT++NLE+V D + G++L+ Sbjct: 120 GPMAHG-SRYHRRPGSMGVI--INRVMKGKLLPGRMGGNRVTIQNLEIVKADTENGVLLI 176 Query: 192 KGCVPGAKKNSWILVRDSFK 211 KG VPGA K S + ++ + K Sbjct: 177 KGNVPGANK-SLVTIKSTVK 195 >gi|269991357|emb|CAX12541.1| 50S ribosomal protein L3 [Fucus vesiculosus] Length = 209 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 84/211 (39%), Positives = 124/211 (58%), Gaps = 3/211 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+ K+GMT +++ EG +PVTV+ + C + +T NGY AVQ+G + +V Sbjct: 1 MSIGIFGNKIGMTQIFDKEGLALPVTVIRVGPCFITQLKTEQLNGYSAVQIGYLKRQVLK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++K G + + P L E++V D +G V + YF +GQ V+V+G +IGKGF Sbjct: 61 LNKAELGHLTKNGLLPLLYLREYKV-PDPTNYSLGQVINVDYFQIGQFVNVSGKSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRHNF THG S +H++ GS G PGRVF K+MAG++G +VT+ LE++ Sbjct: 120 SGNQKRHNFKRGPMTHG-SKNHKAPGSIGPGTTPGRVFPGKRMAGQLGAKKVTISKLEIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +D K L+++KG VPG N + V S K Sbjct: 179 GIDSKHSLLILKGSVPGKSGN-LLNVSPSDK 208 >gi|237718743|ref|ZP_04549224.1| 50S ribosomal protein L3 [Bacteroides sp. 2_2_4] gi|229451875|gb|EEO57666.1| 50S ribosomal protein L3 [Bacteroides sp. 2_2_4] Length = 195 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 117/196 (59%), Gaps = 4/196 (2%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V++ +G+ +P TV+ C V +T++K+GY AVQ+G + K K+ +KP+ G F Sbjct: 1 MTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTKPLMGHFKR 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 V+PK+ L EF+ + L +G + F VDV G + GKGF G +KRH FGG Sbjct: 61 AGVTPKRHLAEFK--EFGTELNLGDTITVEMFNDANFVDVVGTSKGKGFQGVVKRHGFGG 118 Query: 132 -LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190 +ATHG R GS G P +VFK +M G++GG+RVTV+NL+V+ V L+L Sbjct: 119 VGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKVIADHNLLL 178 Query: 191 VKGCVPGAKKNSWILV 206 +KG +PG K S +L+ Sbjct: 179 IKGSIPGC-KGSIVLI 193 >gi|291296991|ref|YP_003508389.1| 50S ribosomal protein L3 [Meiothermus ruber DSM 1279] gi|290471950|gb|ADD29369.1| ribosomal protein L3 [Meiothermus ruber DSM 1279] Length = 214 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 97/217 (44%), Positives = 129/217 (59%), Gaps = 7/217 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ K+GMT ++ + + +PVTV+ C VV +T++K+GY AVQ+G K + V+ Sbjct: 2 KGILGTKVGMTQIWKGD-KAVPVTVILAGPCPVVQRKTIEKDGYEAVQLGFQSQKPQRVN 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP +G F+ V P K L E R P G + S F VG++VDVTG + G GF+G Sbjct: 61 KPAKGHFAKAGVEPVKYLRELRGFN-----PEGDTVTVSIFNVGEVVDVTGTSKGHGFTG 115 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MK+ NF G +HG HR GS G R+ PGRVFK KKMAGR G RVT++ LEVV V Sbjct: 116 VMKKWNFAGGNDSHGAHKIHRHGGSIGNRKTPGRVFKGKKMAGRWGNERVTIQGLEVVDV 175 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 + LILVKG VPGA S ++VR + K GK Sbjct: 176 LENENLILVKGSVPGAN-GSLVVVRQTSKVPAVKAGK 211 >gi|225706142|gb|ACO08917.1| Mitochondrial 39S ribosomal protein L3 [Osmerus mordax] Length = 345 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 83/214 (38%), Positives = 119/214 (55%), Gaps = 4/214 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59 R G+VA KLGM V+ G R VT+L + +C V+ H T ++ +G+ A + VG A Sbjct: 93 RVGLVAVKLGMAPVWTKSGERHVVTMLQVQDCHVLKHLTKEEYDGHTAALVVGGRNASPF 152 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++ F V PK+K+ F+V D+ ++ G+ ++F GQ VDVT TIGKG Sbjct: 153 YKTEENMEMFRIAGVPPKQKVTTFKVS-DNAIIKPGTPLHAAHFRPGQYVDVTAKTIGKG 211 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR+ F G A+HG + +HR G++G DP +VFK KKM G MG T L+V Sbjct: 212 FQGVMKRYGFKGQPASHGQTKTHRRPGASGPGGDPAKVFKGKKMPGIMGNIYDTATGLKV 271 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++ K ++ V G VPG KN + VRD+ Sbjct: 272 WRINTKHNVLYVHGSVPG-HKNCLVKVRDTVLPP 304 >gi|94734480|emb|CAK11309.1| mitochondrial ribosomal protein L3 [Danio rerio] Length = 345 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 84/220 (38%), Positives = 117/220 (53%), Gaps = 4/220 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYM-AVQVGAGEAKVK 59 R G+VA KLGM V++ G R VT+L + +C VV H + + NG+ A+ VG Sbjct: 96 RVGLVAIKLGMMPVWSKSGERHVVTMLQVKDCHVVKHLSKEDYNGHTSALVVGGKNVSPF 155 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + F + + PK+KL F V D+ ++ G+ ++F GQ VDVT TIGKG Sbjct: 156 HRPVGYLEIFQNAGIPPKQKLTTFCVT-DNAIIKPGTPLYAAHFRPGQYVDVTAKTIGKG 214 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR F G A+HG + +HR G+ G DP +VFK KM GRMG T L++ Sbjct: 215 FQGVMKRWGFKGQPASHGQTKTHRRPGALGPGGDPAKVFKGTKMPGRMGNVYNTNFGLKI 274 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 V+ K ++ V G VPG +N + VRD+ K K Sbjct: 275 WRVNTKYNILYVNGSVPG-HRNCLVKVRDTVLPTRLEKNK 313 >gi|258651363|ref|YP_003200519.1| 50S ribosomal protein L3 [Nakamurella multipartita DSM 44233] gi|258554588|gb|ACV77530.1| ribosomal protein L3 [Nakamurella multipartita DSM 44233] Length = 220 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 92/211 (43%), Positives = 121/211 (57%), Gaps = 3/211 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ KLGMT V++ R +PVTV+ V RT + +GY AVQ G + V+ Sbjct: 6 KGILGHKLGMTQVFDEANRVVPVTVVAAGPVVVTAVRTPETDGYSAVQFAFGAVDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKGFS 121 KP G F V+P++ L E R D VG + F G +VDVTG + GKG + Sbjct: 66 KPAAGQFVKAGVTPRRHLVELRTD-DVSGYSVGQELTAAEVFDAGAVVDVTGTSKGKGTA 124 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F GL A HGV HRS GS G PGRVFK +MAGRMG +VTV+NL V + Sbjct: 125 GVMKRHGFAGLGAGHGVQRKHRSPGSIGGCSTPGRVFKGLRMAGRMGNAKVTVQNLTVHA 184 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD RGL+L+ G VPG K ++++ + K+ Sbjct: 185 VDADRGLVLINGAVPGP-KGGLVMIKSAVKN 214 >gi|322436546|ref|YP_004218758.1| 50S ribosomal protein L3 [Acidobacterium sp. MP5ACTX9] gi|321164273|gb|ADW69978.1| 50S ribosomal protein L3 [Acidobacterium sp. MP5ACTX9] Length = 242 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 74/220 (33%), Positives = 119/220 (54%), Gaps = 7/220 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVKNV 61 G++ +K+GMT +++ G PVTVL C + +T+ K+GY A Q+G + K V Sbjct: 4 VGILGKKIGMTQIFDERGDVHPVTVLKAGPCVITQLKTMAKDGYDAAQIGYVDFVKASKV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRV---QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 +K M G F+ NV P + + E + +D + G F + VDV G + G+ Sbjct: 64 TKAMNGHFAKANVPPVRMIKEVAIQKASAEDAEVKAGDRILVDIFENERFVDVIGTSKGR 123 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF+G ++RH FGG +HG + GS G P RVF ++M G MG ++TV+NL Sbjct: 124 GFAGVIRRHGFGGGPKSHGHMF--QVQGSIGASSFPSRVFPGQRMPGHMGDAQITVRNLR 181 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 + ++D + LILV+G VPGA ++ ++L+ + +G Sbjct: 182 IRAIDVEDNLILVEGAVPGA-RDGYVLISKAKAPPRERRG 220 >gi|15605616|ref|NP_212989.1| ribosomal protein L03 [Aquifex aeolicus VF5] gi|3914748|sp|O66431|RL3_AQUAE RecName: Full=50S ribosomal protein L3 gi|2982767|gb|AAC06393.1| ribosomal protein L03 [Aquifex aeolicus VF5] Length = 241 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 87/222 (39%), Positives = 126/222 (56%), Gaps = 4/222 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVK 59 M G++ K+GMT V +G IPVTV+ VV ++ + K+GY A+Q+GA EAK K Sbjct: 1 MPLGLIGEKVGMTRVLLKDGTAIPVTVIKFPVNYVVQVKSQNTKDGYNALQIGAYEAKEK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +++KP+ G F V ++L+EFRV ++ + F G LVDV G++ G+G Sbjct: 61 HLTKPLIGHFKKHGVPLLRRLWEFRVDNPEEFQSGQQLKVEDVFKPGDLVDVWGISKGRG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+GAMKR +F G +HG HR+ G+ G R DPGRV+K K+M G G V V+ L V Sbjct: 121 FAGAMKRWDFAGFPKSHG-HRYHRAVGAIGQRTDPGRVWKGKRMPGHYGAKPVRVQGLFV 179 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF--KSAVNCKGK 219 V V + ILVKG VPG K ++ + + + + K K Sbjct: 180 VDVLPEENAILVKGSVPGHNKGIVVVEQSTIAYRKSQKLKQK 221 >gi|295425652|ref|ZP_06818339.1| 50S ribosomal protein L3 [Lactobacillus amylolyticus DSM 11664] gi|295064668|gb|EFG55589.1| 50S ribosomal protein L3 [Lactobacillus amylolyticus DSM 11664] Length = 212 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 78/217 (35%), Positives = 118/217 (54%), Gaps = 5/217 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G +PVTV+ V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGRKVGMTQIFTKDGALVPVTVVEATPNVVMQVKTVESDGYDAVQLGYQDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + SPK+ + E R + + VGS + F G +VDVTG T G G+ Sbjct: 61 SNKPEKGHAAKAKTSPKRFIREIRGVELKN-YEVGSEVTVDTFKEGDVVDVTGTTRGHGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR THG S HR GS G RV K K + G MG +VT++NL + Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKHLPGHMGVKKVTIENLVIE 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 V + ++++KG VPGA KNS I+V+ + K K Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIVVKTASKVTDAAK 212 >gi|288803933|ref|ZP_06409356.1| 50S ribosomal protein L3 [Prevotella melaninogenica D18] gi|302345074|ref|YP_003813427.1| 50S ribosomal protein L3 [Prevotella melaninogenica ATCC 25845] gi|288333566|gb|EFC72018.1| 50S ribosomal protein L3 [Prevotella melaninogenica D18] gi|302150099|gb|ADK96361.1| 50S ribosomal protein L3 [Prevotella melaninogenica ATCC 25845] Length = 204 Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 85/205 (41%), Positives = 125/205 (60%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G GEAK K SK Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G F +PKK L EF+ ++ +G + F+ + VDV G + GKGF G Sbjct: 63 PQQGHFKKAGTTPKKHLAEFKFDEE---YNLGDTVTVELFSNAKFVDVVGTSKGKGFQGV 119 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG ++THG R GS G P +VFK +M G+MGG+RVT +NL+V+ V Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + LILVKG V G ++ I+ + Sbjct: 180 IPEHNLILVKGSVAGCNGSTVIIKK 204 >gi|50364938|ref|YP_053363.1| 50S ribosomal protein L3 [Mesoplasma florum L1] gi|81827327|sp|Q6F1Z4|RL3_MESFL RecName: Full=50S ribosomal protein L3 gi|50363494|gb|AAT75479.1| 50S ribosomal protein L3 [Mesoplasma florum L1] Length = 238 Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 86/217 (39%), Positives = 128/217 (58%), Gaps = 10/217 (4%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+ MT V+ G+ +PVTV+ + ++ +TL+ NGY+A Q+G + + V+ Sbjct: 2 KGILGRKVEMTQVFTANGKLVPVTVVEVQPNTILQVKTLETNGYVATQLGVFDKRENLVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121 KP G F N PK+ + E R + + VGSV S F GQ VDVTG++ GKGF+ Sbjct: 62 KPELGQFKKANSVPKRFVKEIR---NMEGFEVGSVISASDIFETGQYVDVTGISKGKGFA 118 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 GA+KRHN+ HG S HR GS G R+FK+KKMAG MG + TV+NLEV++ Sbjct: 119 GAIKRHNYSRGPMAHG-SGYHRGIGSMGAI--INRIFKSKKMAGHMGHVKRTVQNLEVIA 175 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +D ++LVKG +PG K ++ ++ + K N + Sbjct: 176 ID--NNIMLVKGSIPGPNKG-FVTIKANVKGLSNTQA 209 >gi|33519658|ref|NP_878490.1| 50S ribosomal subunit protein L3 [Candidatus Blochmannia floridanus] gi|42559603|sp|Q7VQE8|RL3_BLOFL RecName: Full=50S ribosomal protein L3 gi|33517321|emb|CAD83706.1| 50S ribosomal subunit protein L3 [Candidatus Blochmannia floridanus] Length = 219 Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 89/208 (42%), Positives = 130/208 (62%), Gaps = 1/208 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+V RKLGMT + N EG I VT++ + V + +K+GY AVQV G + K ++K Sbjct: 3 GLVGRKLGMTRIINEEGIMIAVTMIEILPHYVTQVKNKEKDGYCAVQVTTGNTRDKCLNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G + ++ K L+EFR+ + L+ VG +F+ VDVTG++ GKGF+GA Sbjct: 63 PKLGHLKKLGINYGKGLWEFRLNDSNRLISVGDIFTLKVLKCINKVDVTGISKGKGFAGA 122 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR NF A+HG S+SHR+ GS G Q PG+VFK KKMAG +G + T++NL V+++D Sbjct: 123 VKRWNFRTQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGHLGYEKATIQNLAVINID 182 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211 K L+LVKG +PG + ++V+ S K Sbjct: 183 IKNNLLLVKGAIPGVIGEN-VIVKRSVK 209 >gi|149198922|ref|ZP_01875963.1| 50S ribosomal protein L3 [Lentisphaera araneosa HTCC2155] gi|149137917|gb|EDM26329.1| 50S ribosomal protein L3 [Lentisphaera araneosa HTCC2155] Length = 210 Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 86/201 (42%), Positives = 119/201 (59%), Gaps = 4/201 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 +G++ +KLGMT VY+ +GR +PVTV+ C V+ +T DK+ Y A+Q+G G + KNVS Sbjct: 2 TGIIGKKLGMTQVYDDKGRLVPVTVIEAGPCPVLDVKTNDKDSYSALQIGFGSKRAKNVS 61 Query: 63 KPMRGFFSSVNV--SPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 K + G + N +P + E R++ D D VGSV + F+ VDV G T G+GF Sbjct: 62 KAVLGHLAKSNNQENPPALIKEIRLEADSDK-EVGSVLTVEEFSDIAYVDVIGTTKGRGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR NFGG RA+HG R GS G PGRVFK KKM G MG + T + L+V+ Sbjct: 121 QGVVKRWNFGGGRASHGG-DWERKGGSIGMCNWPGRVFKGKKMPGHMGSVQRTSQGLKVI 179 Query: 181 SVDDKRGLILVKGCVPGAKKN 201 V + +++VKG VPG Sbjct: 180 QVRPEENILMVKGAVPGFNGG 200 >gi|227879243|ref|ZP_03997113.1| 50S ribosomal protein L3 [Lactobacillus crispatus JV-V01] gi|227894520|ref|ZP_04012325.1| 50S ribosomal protein L3 [Lactobacillus ultunensis DSM 16047] gi|256844429|ref|ZP_05549915.1| 50S ribosomal protein L3 [Lactobacillus crispatus 125-2-CHN] gi|256849183|ref|ZP_05554616.1| 50S ribosomal protein L3 [Lactobacillus crispatus MV-1A-US] gi|262047199|ref|ZP_06020157.1| 50S ribosomal protein L3 [Lactobacillus crispatus MV-3A-US] gi|293380377|ref|ZP_06626448.1| 50S ribosomal protein L3 [Lactobacillus crispatus 214-1] gi|295692160|ref|YP_003600770.1| 50S ribosomal protein l3 [Lactobacillus crispatus ST1] gi|315037530|ref|YP_004031098.1| 50S ribosomal protein L3 [Lactobacillus amylovorus GRL 1112] gi|325956003|ref|YP_004286613.1| 50S ribosomal protein L3 [Lactobacillus acidophilus 30SC] gi|227861137|gb|EEJ68786.1| 50S ribosomal protein L3 [Lactobacillus crispatus JV-V01] gi|227863679|gb|EEJ71100.1| 50S ribosomal protein L3 [Lactobacillus ultunensis DSM 16047] gi|256613507|gb|EEU18710.1| 50S ribosomal protein L3 [Lactobacillus crispatus 125-2-CHN] gi|256713959|gb|EEU28947.1| 50S ribosomal protein L3 [Lactobacillus crispatus MV-1A-US] gi|260572444|gb|EEX29006.1| 50S ribosomal protein L3 [Lactobacillus crispatus MV-3A-US] gi|290923060|gb|EFD99991.1| 50S ribosomal protein L3 [Lactobacillus crispatus 214-1] gi|295030266|emb|CBL49745.1| 50S ribosomal protein L3 [Lactobacillus crispatus ST1] gi|312275663|gb|ADQ58303.1| 50S ribosomal protein L3 [Lactobacillus amylovorus GRL 1112] gi|325332568|gb|ADZ06476.1| 50S ribosomal protein L3 [Lactobacillus acidophilus 30SC] gi|327182826|gb|AEA31273.1| 50S ribosomal protein L3 [Lactobacillus amylovorus GRL 1118] Length = 212 Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 77/217 (35%), Positives = 119/217 (54%), Gaps = 5/217 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G +PVTV+ V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGRKVGMTQIFTKDGVLVPVTVVEATPNVVMQVKTVESDGYEAVQLGYQDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G SPK+ + E R + D VGS + F G +V+VTG + G G+ Sbjct: 61 SNKPEKGHADKAKTSPKRFIREIRGVELKD-YEVGSEVTVDTFKEGDVVNVTGTSRGHGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR THG S HR GS G RV K K++ G MG +VT++NL + Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKRLPGHMGVKKVTIENLVIE 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 V + ++++KG VPGA KNS I+V+ + K+ K Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIVVKTASKAVKADK 212 >gi|145356307|ref|XP_001422374.1| Putative mitochondrial ribosomal protein L3 [Ostreococcus lucimarinus CCE9901] gi|144582616|gb|ABP00691.1| Putative mitochondrial ribosomal protein L3 [Ostreococcus lucimarinus CCE9901] Length = 211 Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 103/212 (48%), Positives = 132/212 (62%), Gaps = 3/212 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVKN 60 R+G VA K GMTC ++ G RIP+TVL +D+C+VV +T +GY AVQVG G K K Sbjct: 2 RTGAVAIKTGMTCDWDARGTRIPLTVLWIDDCEVVAAKTSSGADGYDAVQVGYGSRKPKQ 61 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K G+F + K+ L EFR D L P G+ + ++F GQ VDV G+T GKGF Sbjct: 62 VTKAELGYFVRRKTNIKRALCEFRTSADGVLAP-GTAITAAHFAAGQYVDVQGVTKGKGF 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G MKR F G A+HG + HR+HGS G QDPGRVFK KKMAGRMGG TV++ V Sbjct: 121 QGPMKRWGFSGQPASHGNTKKHRAHGSIGQCQDPGRVFKGKKMAGRMGGRTRTVQSAYVY 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++ L+ VKG VPG + +RDS + Sbjct: 181 KVDTEKNLVYVKGQVPG-NAGMAVKIRDSLRK 211 >gi|295107591|emb|CBL05134.1| LSU ribosomal protein L3P [Gordonibacter pamelaeae 7-10-1-b] Length = 206 Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 90/209 (43%), Positives = 122/209 (58%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M + + +K+GMT ++ + R +PVTV+ + +V +T +GY AVQ+G G K K Sbjct: 1 MINAIYGKKIGMTQIFGEDDRVVPVTVIQAEPNKVCQVKTKATDGYEAVQMGFGAIKEKK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM+G F +P + L E RV+ VG + + F + VDVTG + GKGF Sbjct: 61 VNKPMKGHFEKQGAAPVRYLREVRVEN-AGEYNVGDEQTVAAFAETKKVDVTGTSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR+ F G HG HR+ GS G P RVFK K+ G MG + VTVKNLEVV Sbjct: 120 AGVMKRYGFRGGPGGHGAH-FHRAPGSVGQCATPSRVFKGLKLPGHMGCDTVTVKNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VD+ + LILVKG VPG KN + VR + Sbjct: 179 RVDEDQNLILVKGAVPGG-KNGIVRVRMA 206 >gi|308190095|ref|YP_003923026.1| 50S ribosomal protein L3 [Mycoplasma fermentans JER] gi|319777391|ref|YP_004137042.1| 50S ribosomal protein l3 [Mycoplasma fermentans M64] gi|307624837|gb|ADN69142.1| 50S ribosomal protein L3 [Mycoplasma fermentans JER] gi|318038466|gb|ADV34665.1| 50S ribosomal protein L3 [Mycoplasma fermentans M64] Length = 275 Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 80/215 (37%), Positives = 120/215 (55%), Gaps = 6/215 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT ++ G +PVTV+ + V + DKNGY+A Q+ GE K + Sbjct: 2 KGILGRKIGMTQIFTELGASVPVTVIEVQPNVVTKVLSADKNGYVATQIAVGEKKEHRSN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP++G F+ +PK+ + E R + +G + F G+LVD+TG + GKGF+G Sbjct: 62 KPLKGQFAQAKTTPKRYVKEIRGMQG---YELGQTIKANIFKAGELVDITGTSKGKGFAG 118 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180 +KR N +HG + TG D RVFK M G +G R TV+NLE+V Sbjct: 119 TIKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVFKGMTMPGHLGAVRTTVQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 VD ++LVKG +PGA KNS++++R++ K N Sbjct: 179 KVDVANNIMLVKGSIPGA-KNSYVMIREAVKGLPN 212 >gi|242219427|ref|XP_002475493.1| mitochondrial 50S ribosomal protein L3 [Postia placenta Mad-698-R] gi|220725308|gb|EED79301.1| mitochondrial 50S ribosomal protein L3 [Postia placenta Mad-698-R] Length = 269 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 105/218 (48%), Positives = 142/218 (65%), Gaps = 5/218 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVV-HRTLDKN--GYMAVQVGAGEAK 57 +R+G++ARK GMT +++ G R PVTVL L+NCQV +T+ K+ Y AVQV A + Sbjct: 1 VRTGLIARKRGMTVMWDDHGARFPVTVLQLENCQVTANIKTVRKDLSEYHAVQVAATDRP 60 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 K +K M G F V PK+ + EF V D +P+G+ S +F GQ VDV ++G Sbjct: 61 AKTATKQMLGHFKKAGVDPKRIVKEFPVTPD-AHVPIGTTLSAVHFVPGQYVDVIANSLG 119 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF G MK+ NF GLRA+HGVS+SHRS G+ G QDPGRV+ KKMAGR+GG R T +NL Sbjct: 120 KGFQGTMKKWNFKGLRASHGVSVSHRSAGAIGAHQDPGRVWPGKKMAGRLGGVRTTTQNL 179 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 V+ VD LI V+GCVPG ++ ++VRD+ K ++ Sbjct: 180 AVIRVDSALDLIFVRGCVPGID-DAHVMVRDAKKKMIS 216 >gi|212697253|ref|ZP_03305381.1| hypothetical protein ANHYDRO_01821 [Anaerococcus hydrogenalis DSM 7454] gi|325848888|ref|ZP_08170398.1| 50S ribosomal protein L3 [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|212675702|gb|EEB35309.1| hypothetical protein ANHYDRO_01821 [Anaerococcus hydrogenalis DSM 7454] gi|325480532|gb|EGC83594.1| 50S ribosomal protein L3 [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 209 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 90/208 (43%), Positives = 124/208 (59%), Gaps = 3/208 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 + K+GMT V + +G PVTVL D +V ++ + +GY ++QVG + K KNV KP Sbjct: 4 IFTTKVGMTQVIDEDGVVTPVTVLKADENVIVQVKSEEVDGYNSIQVGYYDKKEKNVKKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +RG F N S K+ L E R+ + +L P G S F G+LVD+ + GKG GA+ Sbjct: 64 IRGHFDKANASYKRYLKEVRLSEKSELNP-GDTLSVDQFEEGELVDIVATSKGKGTQGAI 122 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR N+G A+HG S SHR G+ DP RVFK +K +G+MG RVTV+NL+VV V+ Sbjct: 123 KRWNYGRGPASHG-SKSHRVAGARAAGSDPARVFKGRKGSGKMGNERVTVQNLKVVKVNT 181 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212 + ILVKG VPG K + V+ + KS Sbjct: 182 EDSYILVKGAVPGP-KGGLVQVKQAIKS 208 >gi|114589225|ref|XP_516751.2| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes] Length = 348 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 79/221 (35%), Positives = 117/221 (52%), Gaps = 5/221 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKV 58 R G++A KLGM ++ +G++ VT+L + +C V+ + + + NG MA + VG Sbjct: 95 FRVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSR 154 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 + + F+ + + PK+ + F + + + P G+ ++F GQ VDVT TIGK Sbjct: 155 FRKATSILEFYRELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGK 213 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G MKR F G ATHG + +HR G+ D GRV+ KM G+MG T L+ Sbjct: 214 GFQGVMKRWGFKGQPATHGQTKTHRRPGAV-ATGDIGRVWPGTKMPGKMGNIYRTEYGLK 272 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 V ++ K +I V G VPG KN + VRDS A GK Sbjct: 273 VWRINTKHNIIYVNGSVPG-HKNCLVKVRDSKLPAYKDLGK 312 >gi|71083804|ref|YP_266524.1| 50S ribosomal protein L3 [Candidatus Pelagibacter ubique HTCC1062] gi|109893535|sp|Q4FLL8|RL3_PELUB RecName: Full=50S ribosomal protein L3 gi|71062917|gb|AAZ21920.1| 50S ribosomal protein L3 [Candidatus Pelagibacter ubique HTCC1062] Length = 236 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 106/209 (50%), Positives = 142/209 (67%), Gaps = 2/209 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 ++ +K+GMT + GR +PVTV+ ++ +V+ +K GY AVQ+G G+ K ++ Sbjct: 4 IALIGKKIGMTREFYKTGRLVPVTVIKMEKARVIQVIEEEKRGYKAVQLGFGKIKASKLT 63 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K M+G ++ N KKKL EFRV KD +L G+ F F + VD T TIGKGF+G Sbjct: 64 KAMKGLYAKKNTEAKKKLKEFRV-KDTELYKEGNEFGLEIFNEVKFVDTTSKTIGKGFAG 122 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNFGGLRATHGVS+SHRSHGSTG RQDPG+VFK KKMAG MG T++NLE++ Sbjct: 123 AMKRHNFGGLRATHGVSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDRVRTMQNLEIIKT 182 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D + L+ +KG +PG+ KN+ ILV+ S K Sbjct: 183 DIENELLYLKGSIPGS-KNTEILVKKSVK 210 >gi|44209|emb|CAA29704.1| unnamed protein product [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 223 Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 80/217 (36%), Positives = 129/217 (59%), Gaps = 8/217 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+ MT V+ G+ +PVTV+ + V+ +T+D +GY+AVQ+G + +V V+ Sbjct: 2 KGILGRKVEMTQVFTNSGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121 KP G F N +PK+ + E R + +G V + F G+ VDVTG++ GKGF+ Sbjct: 62 KPELGHFKKANSNPKRFVKEIR---NMQGYEIGQVINVSDIFVSGEYVDVTGISKGKGFA 118 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHN+ HG S HR GS G R+FK+KKM G MG + T++NLE+++ Sbjct: 119 GGIKRHNYSRGPMAHG-SGYHRGIGSMGAI--INRIFKSKKMPGHMGNAKRTIQNLEIIA 175 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +D ++L+KG +PG KNS++ ++ + K + + Sbjct: 176 IDQSNNIMLIKGPIPGP-KNSFVQIKQNVKGMSSKQA 211 >gi|58336630|ref|YP_193215.1| 50S ribosomal protein L3 [Lactobacillus acidophilus NCFM] gi|227903187|ref|ZP_04020992.1| 50S ribosomal protein L3 [Lactobacillus acidophilus ATCC 4796] gi|81311536|sp|Q5FM90|RL3_LACAC RecName: Full=50S ribosomal protein L3 gi|58253947|gb|AAV42184.1| 50S ribosomal protein L3 [Lactobacillus acidophilus NCFM] gi|227868992|gb|EEJ76413.1| 50S ribosomal protein L3 [Lactobacillus acidophilus ATCC 4796] Length = 212 Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 77/217 (35%), Positives = 119/217 (54%), Gaps = 5/217 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT ++ +G +PVTV+ V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGRKVGMTQIFTKDGILVPVTVVEATPNVVMQVKTVESDGYEAVQLGYQDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G SPK+ + E R + D VGS + F G +V+VTG + G G+ Sbjct: 61 SNKPEKGHADKAKTSPKRFIREIRGVELKD-YEVGSEVTVDTFKEGDVVNVTGTSRGHGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR THG S HR GS G RV K K++ G MG +VT++NL + Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKRLPGHMGVKKVTIENLVIE 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 V + ++++KG VPGA KNS I+V+ + K+ K Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIVVKTASKAVKADK 212 >gi|171689544|ref|XP_001909712.1| hypothetical protein [Podospora anserina S mat+] gi|170944734|emb|CAP70845.1| unnamed protein product [Podospora anserina S mat+] Length = 382 Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 98/218 (44%), Positives = 137/218 (62%), Gaps = 2/218 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+GV+A K GMT + G RIP TVL LD Q V+++T +GY AVQVG GE KN Sbjct: 83 VRAGVLAIKKGMTAFMGLTGTRIPCTVLQLDRVQTVLNKTRKDHGYWAVQVGFGERDPKN 142 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + PM G++ + ++PK++L EF+V+ + LLPVG P +F +GQ VDV + G GF Sbjct: 143 IGAPMLGYYEAKGIAPKEQLAEFKVRDEKGLLPVGVQLMPDWFYIGQRVDVRSNSRGMGF 202 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179 +G MKRH F G A+HG S +HR+ GS G Q G RV KKM GRMG RVTV+NL + Sbjct: 203 AGGMKRHGFSGQEASHGNSKNHRTIGSAGPSQGSGSRVLPGKKMPGRMGNQRVTVQNLPI 262 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 + +D+ G+++VKG V G K + ++D+ K + Sbjct: 263 LLIDNDLGIVVVKGAVAGP-KGCVVKIQDACKKPPPPE 299 >gi|301774558|ref|XP_002922699.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like [Ailuropoda melanoleuca] Length = 348 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 78/216 (36%), Positives = 116/216 (53%), Gaps = 5/216 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGY-MAVQVGAGEAKVK 59 R G++A KLGM ++ +GR+ VT+L + +C V+ + + NG A+ VG A Sbjct: 96 RVGLIALKLGMMPLWTKDGRKHVVTLLQVQDCHVLKYTPKENHNGKMAALTVGGKTASRF 155 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + S + F+ + + PK+K+ F V D+ ++ G+ ++F GQ VDVT TIGKG Sbjct: 156 HKSTSVLEFYQELGLPPKQKVKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 214 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR F G ATHG + +HR G+ D R++ KM G+MG T L+V Sbjct: 215 FQGVMKRWGFKGQPATHGQTKTHRRPGAI-STGDVARIWPGTKMPGQMGNRDRTAYGLKV 273 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++ K +I V G VPG KN + +RDS A Sbjct: 274 WRINTKHNVIYVNGSVPG-HKNCLVKIRDSNLPAYK 308 >gi|190346390|gb|EDK38465.2| hypothetical protein PGUG_02563 [Meyerozyma guilliermondii ATCC 6260] Length = 279 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 101/210 (48%), Positives = 137/210 (65%), Gaps = 2/210 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ K GM Y +G + TVL +D+C+V+ ++T + +GY AV VG+G K+KN+ Sbjct: 57 RPGLLGIKRGMITWYTEDGNQFAATVLEVDSCEVMANKTKETDGYTAVMVGSG-TKLKNL 115 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 + VSPK+ + EFRV+ + L+PVG+ YF VGQLVDV+G++ GKGF+ Sbjct: 116 TPDQLRLAQQAGVSPKRSIREFRVRDESGLIPVGTELRADYFAVGQLVDVSGVSKGKGFA 175 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRH F GL+A+HGVS +HRS GSTG QDPGRV KKMAG MG TV N EV+ Sbjct: 176 GVIKRHGFAGLQASHGVSKAHRSAGSTGATQDPGRVLPGKKMAGHMGAVNRTVFNNEVLH 235 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D G+++VKG VPG K S I +RD+ K Sbjct: 236 ADGDAGILVVKGVVPGPNK-SVIKIRDAKK 264 >gi|237733228|ref|ZP_04563709.1| 50S ribosomal protein L3 [Mollicutes bacterium D7] gi|229383609|gb|EEO33700.1| 50S ribosomal protein L3 [Coprobacillus sp. D7] Length = 232 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 79/202 (39%), Positives = 113/202 (55%), Gaps = 4/202 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V+ +G IPVTV+ D V+ +T+ +GY A+QVG + + K +K G Sbjct: 1 MTQVFTTDGLLIPVTVVEADANVVLQKKTVATDGYDAIQVGFEDKREKLANKAELGIVKK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 N +PK+ + EFR + VG + F G++VDVTG + GKG+ G +KRH Sbjct: 61 ANTAPKRFIKEFRYDEMMS-YEVGDKITVDSFVAGEVVDVTGTSKGKGYQGVIKRHGQRI 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 HG S +HR GS G P R+ KK+ G+MG TV+NLEVV+VD + L+L+ Sbjct: 120 GPKGHG-SGAHRIVGSMGPIA-PNRIAPGKKLPGQMGHVTRTVQNLEVVAVDVENNLLLI 177 Query: 192 KGCVPGAKKNSWILVRDSFKSA 213 KG VPG KK ++V+ K+A Sbjct: 178 KGSVPGPKKG-LVIVKSGIKAA 198 >gi|229917358|ref|YP_002886004.1| 50S ribosomal protein L3 [Exiguobacterium sp. AT1b] gi|259646546|sp|C4KZP6|RL3_EXISA RecName: Full=50S ribosomal protein L3 gi|229468787|gb|ACQ70559.1| ribosomal protein L3 [Exiguobacterium sp. AT1b] Length = 208 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 90/212 (42%), Positives = 128/212 (60%), Gaps = 5/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT ++N G +PVTV+ ++ V+ +T+D +GY AVQ+G G+ K Sbjct: 1 MAKGILGTKLGMTQIFNEAGEVVPVTVVAVEGNVVLQLKTVDTDGYEAVQLGFGDIKESR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + E R + +G F G+LVDVTG + GKGF Sbjct: 61 QNKPSKGHAAKANATPKRFIKEVRTS--VEGYEIGQEIKADIFAAGELVDVTGTSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KRH HG S HR GS G P RVFK K + G+MGG R T++NLEVV Sbjct: 119 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGQMGGERKTIQNLEVV 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +RGL+LVKG +PGA+K S ++++ + K Sbjct: 177 KVDVERGLLLVKGAIPGARK-SNVIIKSAVKG 207 >gi|317503980|ref|ZP_07961988.1| 50S ribosomal protein L3 [Prevotella salivae DSM 15606] gi|315665006|gb|EFV04665.1| 50S ribosomal protein L3 [Prevotella salivae DSM 15606] Length = 204 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 82/205 (40%), Positives = 122/205 (59%), Gaps = 5/205 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ +P TV+ C V +T +K+GY A+Q+G EAK SK Sbjct: 3 GLIGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTEEKDGYKALQLGFEEAKENRTSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 PM G F +PKK L EF+ ++ +G + F+ + VD+ G + GKGF G Sbjct: 63 PMMGTFKKAGTTPKKHLAEFKFNEE---YNLGDTLTVEIFSDAKFVDIVGTSKGKGFQGV 119 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG ++THG R GS G P +VFK +M G+MGG+RVT +NL+V+ V Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + L+LVKG V G S +L++ Sbjct: 180 IPEHNLLLVKGSVAGCN-GSTVLIK 203 >gi|297170808|gb|ADI21828.1| ribosomal protein L3 [uncultured gamma proteobacterium HF0130_25M15] Length = 305 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 132/212 (62%), Gaps = 4/212 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K GMT V+ +GR +PVT++ + + +T +GY A+QV G+ KN Sbjct: 2 IGIVGKKCGMTRVFTDDGRSVPVTIVQANPNLINRIKTEATDGYDAIQVLTGQT-TKNPK 60 Query: 63 KPMRGFFSSV-NVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 KP G + N KL EFR+ ++ + + G + YF G+LVDV+G +IGKG+ Sbjct: 61 KPDSGQIKTNPNEKLSHKLHEFRLNANELEQVDTGKEITVDYFEKGELVDVSGNSIGKGY 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNF ATHG S++HR+ GS G Q PGRVFK KKMAGRMG + T++NLEV+ Sbjct: 121 AGVIKRHNFKTQDATHGNSLAHRAPGSIGQNQTPGRVFKGKKMAGRMGNVKKTMQNLEVI 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +D R LI +KG + G +NS++++ S KS Sbjct: 181 DIDSDRNLIFIKGSIAG-HENSFVVITPSIKS 211 >gi|160947700|ref|ZP_02094867.1| hypothetical protein PEPMIC_01635 [Parvimonas micra ATCC 33270] gi|158446834|gb|EDP23829.1| hypothetical protein PEPMIC_01635 [Parvimonas micra ATCC 33270] Length = 208 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 78/208 (37%), Positives = 118/208 (56%), Gaps = 3/208 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT ++ +G + VTV+ V +T++ +GY A+Q G + K K V+KP Sbjct: 4 ILGKKIGMTQIFTEDGTVVSVTVVEAGPMFVTQVKTVETDGYNAIQCGYVDKKEKKVTKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 ++G F V+V K+ + EFR+ + + G F G VDV G + GKG GA+ Sbjct: 64 LKGHFDKVSVGYKRFVREFRL-NEGETFETGQEIKVDLFAEGDKVDVIGTSKGKGTQGAI 122 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR N+G HG S SHR G+ PGRV K +K +G+ G + TV+NL VV VD Sbjct: 123 KRWNYGRGPEGHG-SKSHRVAGARSAGTYPGRVLKGRKASGKTGNKKSTVQNLVVVKVDV 181 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212 ++ LILVKG +PG K + +R++ K Sbjct: 182 EKNLILVKGAIPGP-KGGLVTIREAVKR 208 >gi|91763160|ref|ZP_01265124.1| 50S ribosomal protein L3 [Candidatus Pelagibacter ubique HTCC1002] gi|91717573|gb|EAS84224.1| 50S ribosomal protein L3 [Candidatus Pelagibacter ubique HTCC1002] Length = 236 Score = 231 bits (589), Expect = 7e-59, Method: Composition-based stats. Identities = 108/209 (51%), Positives = 143/209 (68%), Gaps = 2/209 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 +V +K+GMT + GR +PVTV+ ++ +V+ +K GY AVQ+G G+ K ++ Sbjct: 4 IALVGKKIGMTREFYKTGRLVPVTVIKMEKARVIQVIEEEKRGYKAVQLGFGKIKASKLT 63 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K M+GF++ N KKKL EFRV KD +L G+ F F + VD T TIGKGF+G Sbjct: 64 KAMKGFYAKKNTEAKKKLKEFRV-KDTELYKEGNEFGLEIFNEVKFVDTTSKTIGKGFAG 122 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNFGGLRATHGVS+SHRSHGSTG RQDPG+VFK KKMAG MG T++NLE++ Sbjct: 123 AMKRHNFGGLRATHGVSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDRVRTMQNLEIIKT 182 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D + L+ +KG +PG+ KN+ ILV+ S K Sbjct: 183 DIENELLYLKGSIPGS-KNTEILVKKSVK 210 >gi|225849548|ref|YP_002729713.1| 50S ribosomal protein L3 [Sulfurihydrogenibium azorense Az-Fu1] gi|225644163|gb|ACN99213.1| 50S ribosomal protein L3 [Sulfurihydrogenibium azorense Az-Fu1] Length = 228 Score = 231 bits (589), Expect = 7e-59, Method: Composition-based stats. Identities = 88/211 (41%), Positives = 127/211 (60%), Gaps = 5/211 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ + G+ +PVTV+ C V R+ DK+GY AV + GE K KN Sbjct: 1 MPKGIIGKKIGMTRIF-VNGKAVPVTVVQAGPCYVTYLRSKDKDGYEAVALAFGERKEKN 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119 KP+ F N+ P K + EF + K+ + L +G F G LVDVTG + G+G Sbjct: 60 TPKPLLAIFKKANIKPAKVIKEFPL-KEGETLELGQEIRVEQVFEKGDLVDVTGKSKGRG 118 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+ MKR +F G +HG HR+ GS GCR +PGRV+K K+MAG G VTV LEV Sbjct: 119 FTSVMKRWDFAGFPKSHG-HRYHRAVGSIGCRTEPGRVWKTKRMAGHYGNETVTVLGLEV 177 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V + ++ +IL+KG +PGA NS + +++S Sbjct: 178 VDIIPEKNVILLKGSIPGAP-NSTVFLKNSV 207 >gi|255712065|ref|XP_002552315.1| KLTH0C02002p [Lachancea thermotolerans] gi|238933694|emb|CAR21877.1| KLTH0C02002p [Lachancea thermotolerans] Length = 268 Score = 231 bits (589), Expect = 7e-59, Method: Composition-based stats. Identities = 99/215 (46%), Positives = 141/215 (65%), Gaps = 2/215 (0%) Query: 2 RSGVVARKLGMTCVYNI-EGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R G ++ K GM ++ G R+ TVL L+N +V++HR L NGY A QVG G Sbjct: 54 RCGALSLKRGMIPYFDEASGNRVAATVLELNNVEVIMHRNLKDNGYFACQVGFGSKHPSK 113 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS+ M G F+S V+PK+K+ EFRV+ LLP+G++ PS+F GQ VD+ ++ GKGF Sbjct: 114 VSRQMLGHFASKIVNPKEKVVEFRVKDQSGLLPLGTLIKPSFFMPGQYVDLRSISKGKGF 173 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR+NF GL+A+HGVS+SHR GS G Q PGRV KKM G MG +VT++N +++ Sbjct: 174 AGVMKRYNFKGLKASHGVSVSHRKGGSYGQNQTPGRVLPGKKMPGHMGVQQVTIQNSQIL 233 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 VDD+ G+++VKG V G K ++ ++D+ K A Sbjct: 234 KVDDENGVVIVKGSVAGP-KGGFVRIQDAIKKAPK 267 >gi|146417733|ref|XP_001484834.1| hypothetical protein PGUG_02563 [Meyerozyma guilliermondii ATCC 6260] Length = 279 Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats. Identities = 101/210 (48%), Positives = 136/210 (64%), Gaps = 2/210 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ K GM Y +G + TVL +D+C+V+ ++T + +GY AV VG G K+KN+ Sbjct: 57 RPGLLGIKRGMITWYTEDGNQFAATVLEVDSCEVMANKTKETDGYTAVMVGLG-TKLKNL 115 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 + VSPK+ + EFRV+ + L+PVG+ YF VGQLVDV+G++ GKGF+ Sbjct: 116 TPDQLRLAQQAGVSPKRSIREFRVRDESGLIPVGTELRADYFAVGQLVDVSGVSKGKGFA 175 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRH F GL+A+HGVS +HRS GSTG QDPGRV KKMAG MG TV N EV+ Sbjct: 176 GVIKRHGFAGLQASHGVSKAHRSAGSTGATQDPGRVLPGKKMAGHMGAVNRTVFNNEVLH 235 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D G+++VKG VPG K S I +RD+ K Sbjct: 236 ADGDAGILVVKGVVPGPNK-SVIKIRDAKK 264 >gi|19114797|ref|NP_593885.1| mitochondrial ribosomal protein subunit L9 (predicted) [Schizosaccharomyces pombe 972h-] gi|74665370|sp|Q9P6P6|RM09_SCHPO RecName: Full=60S ribosomal protein L9, mitochondrial; Flags: Precursor gi|7708596|emb|CAB90144.1| mitochondrial ribosomal protein subunit L9 (predicted) [Schizosaccharomyces pombe] Length = 259 Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats. Identities = 97/217 (44%), Positives = 133/217 (61%), Gaps = 2/217 (0%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R GV+ K GMT ++ + G ++P+T+L D Q + RT +K+GY AVQVG+G K K Sbjct: 42 LRPGVILVKKGMTNAWDEKTGMQVPLTILQFDRVQAIDVRTKEKHGYYAVQVGSGIRKPK 101 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +++K +G F S N+ PK + EFRV+ L+ G++F+ YF Q VDV G+T GKG Sbjct: 102 SITKAEQGNFFSHNIYPKMHVREFRVRDASGLVSPGTIFTTDYFKPKQYVDVKGITKGKG 161 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKR F G A+HG S+SHR+ GSTG P RV +KMAG MG TVKNL V Sbjct: 162 FAGVMKRWGFSGGNASHGASLSHRTPGSTGQNTTPSRVLPGRKMAGHMGHRSRTVKNLLV 221 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 +VD ILVKG +PG K S + V D+ + + Sbjct: 222 WAVDADLECILVKGSIPGPNK-SAVYVTDTINRSTSA 257 >gi|6005862|ref|NP_009139.1| 39S ribosomal protein L3, mitochondrial [Homo sapiens] gi|133116|sp|P09001|RM03_HUMAN RecName: Full=39S ribosomal protein L3, mitochondrial; Short=L3mt; Short=MRP-L3 gi|34754|emb|CAA29639.1| unnamed protein product [Homo sapiens] gi|13097225|gb|AAH03375.1| Mitochondrial ribosomal protein L3 [Homo sapiens] gi|48145557|emb|CAG33001.1| MRPL3 [Homo sapiens] gi|119599615|gb|EAW79209.1| mitochondrial ribosomal protein L3 [Homo sapiens] gi|312152442|gb|ADQ32733.1| mitochondrial ribosomal protein L3 [synthetic construct] Length = 348 Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats. Identities = 78/221 (35%), Positives = 117/221 (52%), Gaps = 5/221 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKV 58 R G++A KLGM ++ +G++ VT+L + +C V+ + + + NG MA + VG Sbjct: 95 FRVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSR 154 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 + + F+ + + PK+ + F + + + P G+ ++F GQ VDVT TIGK Sbjct: 155 FRKATSILEFYRELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGK 213 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G MKR F G ATHG + +HR G+ D GRV+ KM G+MG T L+ Sbjct: 214 GFQGVMKRWGFKGQPATHGQTKTHRRPGAV-ATGDIGRVWPGTKMPGKMGNIYRTEYGLK 272 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 V ++ K +I V G VPG KN + V+DS A GK Sbjct: 273 VWRINTKHNIIYVNGSVPG-HKNCLVKVKDSKLPAYKDLGK 312 >gi|221220576|gb|ACM08949.1| Mitochondrial 39S ribosomal protein L3 [Salmo salar] Length = 342 Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats. Identities = 84/210 (40%), Positives = 118/210 (56%), Gaps = 4/210 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59 R G+VA KLGM V+ G R VT+L + +C V+ + + +K +G+ A + VG A Sbjct: 91 RVGLVAVKLGMAPVWTKTGERHVVTMLQVQDCHVLNYLSKEKYDGHTAALVVGGKNASPF 150 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + F V PK+K+ F+V D+ ++ G+ ++F GQ VDVT TIGKG Sbjct: 151 YKTDEEMEMFRLAGVPPKQKVTTFKVS-DNAIIKPGTPLYAAHFRPGQYVDVTAKTIGKG 209 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR+ F G A+HG + +HR G++G DP +VFK KKM G MG T L+V Sbjct: 210 FQGVMKRYGFKGQPASHGQTKTHRRPGASGPGGDPAKVFKGKKMPGMMGNVFDTAHGLKV 269 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 V+ K +I V G VPG KN + VRD+ Sbjct: 270 WRVNTKYNVIYVHGSVPG-HKNCLLKVRDT 298 >gi|118586994|ref|ZP_01544426.1| ribosomal protein L3, BL3 [Oenococcus oeni ATCC BAA-1163] gi|118432616|gb|EAV39350.1| ribosomal protein L3, BL3 [Oenococcus oeni ATCC BAA-1163] Length = 240 Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats. Identities = 78/220 (35%), Positives = 115/220 (52%), Gaps = 6/220 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ +G IPVTV+ V+ +T + +GY A+Q+G + + Sbjct: 1 MTKGILGRKVGMTQVFTDKGELIPVTVIEALPNVVLQVKTPETDGYSALQLGVFDKRKIA 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + +PK+ + E R + D G F G+ VDV G+T G GF Sbjct: 61 ANKPEQGHAKKASAAPKRYVREIRDAQGD--YKQGDQVKVDVFAAGEYVDVQGITKGHGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G++KR HG S HR GS G +VFK K + G+MGG+ T + L V Sbjct: 119 QGSIKRLGQSRGPMAHG-SRYHRRPGSMGAI--INKVFKGKLLPGQMGGDLRTAQKLLVA 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220 VD LIL+KG VPGA K S++ ++ + K K K+ Sbjct: 176 GVDPANNLILIKGNVPGANK-SFVTIKSTVKPFKASKIKL 214 >gi|147906354|ref|NP_001088168.1| mitochondrial ribosomal protein L3 [Xenopus laevis] gi|54035102|gb|AAH84076.1| LOC494992 protein [Xenopus laevis] Length = 341 Score = 230 bits (588), Expect = 9e-59, Method: Composition-based stats. Identities = 74/211 (35%), Positives = 111/211 (52%), Gaps = 5/211 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59 R G++A KLGM ++ G + VT+L + +C V+ + ++ +G + + VG Sbjct: 91 RVGLIAVKLGMMPIWTKSGEKHAVTMLQVRDCHVIKYTPKEEFDGKTSSLTVGGKNVSPF 150 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 S+ + + V PK+K+ F+V D+ ++ G+ ++F GQ VDVT TIGKG Sbjct: 151 YKSESVMEMYREAGVPPKQKISIFKVS-DNAIIKPGTPLYAAHFRPGQFVDVTAKTIGKG 209 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR + G A+HG + +HR G+ DP RVF KM GRMG T L+V Sbjct: 210 FQGVMKRWGYKGQPASHGQTKTHRRPGAI-SSGDPARVFPGTKMPGRMGNIYRTSYALKV 268 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V+ K +I V G VPG N + V D+ Sbjct: 269 WRVNTKHNIIYVNGSVPG-HTNCLVKVTDTK 298 >gi|224370691|ref|YP_002604855.1| 50S ribosomal protein L3 [Desulfobacterium autotrophicum HRM2] gi|259647408|sp|C0Q9X3|RL3_DESAH RecName: Full=50S ribosomal protein L3 gi|223693408|gb|ACN16691.1| RplC [Desulfobacterium autotrophicum HRM2] Length = 207 Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 115/210 (54%), Gaps = 3/210 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ +G +PVTV+ C V + +GY A+Q+G E + Sbjct: 1 MFKGMLGKKIGMTSIFAADGTLVPVTVVRFGPCVVTQVKAEKTDGYNALQLGFDERALAK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP G FS + + EFRV+ D+ VG F +G V+V+G + G+GF Sbjct: 61 CNKPKVGHFSKSGSTGFNVVREFRVENTDE-FEVGQNIGLDGFAIGDKVNVSGTSKGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRH F THG +HR GS GC P RV K ++M G MG +R TVKNLE++ Sbjct: 120 AGTIKRHGFSRGPETHGC-RNHRKPGSIGCSAWPARVVKGRRMPGHMGVDRKTVKNLEII 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 + L+++KG VPG K + +R + Sbjct: 179 DIRPDENLVMIKGPVPG-WKTGLLEIRKAV 207 >gi|255022702|ref|ZP_05294688.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL J1-208] Length = 210 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 121/213 (56%), Gaps = 5/213 (2%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ RK + IPVTV+ V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGRKXXXXXXFLLKTDELIPVTVIEAAQNVVLQKKTVETDGYEAVQIGFEDKRAI 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +KP +G + N +PK+ + EFR + D +G+ F G ++D TG++ GKG Sbjct: 61 LSNKPEQGHVAKANTTPKRFIREFR-DVNLDEYEIGAEVKVDVFAEGDIIDATGVSKGKG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KRH HG S HR GS G P RVFKNK + GRMGG ++T++NLE+ Sbjct: 120 FQGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQITIQNLEI 177 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V VD ++ ++LVKG VPGAKK + + ++ + K+ Sbjct: 178 VKVDVEKNVLLVKGNVPGAKK-ALVQIKTATKA 209 >gi|73748316|ref|YP_307555.1| 50S ribosomal protein L3 [Dehalococcoides sp. CBDB1] gi|147669096|ref|YP_001213914.1| 50S ribosomal protein L3 [Dehalococcoides sp. BAV1] gi|289432364|ref|YP_003462237.1| 50S ribosomal protein L3 [Dehalococcoides sp. GT] gi|109893426|sp|Q3ZZM4|RL3_DEHSC RecName: Full=50S ribosomal protein L3 gi|189042842|sp|A5FRY9|RL3_DEHSB RecName: Full=50S ribosomal protein L3 gi|73660032|emb|CAI82639.1| ribosomal protein L3 [Dehalococcoides sp. CBDB1] gi|146270044|gb|ABQ17036.1| LSU ribosomal protein L3P [Dehalococcoides sp. BAV1] gi|288946084|gb|ADC73781.1| 50S ribosomal protein L3 [Dehalococcoides sp. GT] Length = 205 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 126/211 (59%), Gaps = 6/211 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ +G+ PVT++ C VV +T ++GY AVQ+G G+AK + Sbjct: 1 MIQGIIGKKIGMTQIFQEDGKAQPVTLVEAGPCVVVQVKTEKQDGYEAVQLGYGKAK--H 58 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++ ++G K L E V D + VG + S F G+ +D +G++ G+GF Sbjct: 59 ITSAVKGQCR--GFGEFKVLREVDVD-DIAAVSVGDQITVSDFKDGEKIDASGVSRGRGF 115 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG +KR +F G THG S HR+ GS G PGR++K K MAG MG VT++NL V+ Sbjct: 116 SGVVKRWHFAGGPKTHGQSDRHRAPGSIGSTTTPGRIYKGKHMAGHMGNEAVTIRNLVVL 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D ++ L++VKG +PG KN+ IL++ + K Sbjct: 176 KTDAEKNLLMVKGAIPGG-KNTIILIKKTGK 205 >gi|269101057|ref|YP_003289205.1| 50S ribosomal protein L3 [Ectocarpus siliculosus] gi|266631565|emb|CAV31236.1| Chloroplast 50S ribosomal protein L3 [Ectocarpus siliculosus] gi|270118695|emb|CAT18766.1| Chloroplast 50S ribosomal protein L3 [Ectocarpus siliculosus] Length = 207 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 81/206 (39%), Positives = 116/206 (56%), Gaps = 2/206 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+ K+GMT +++ G +PVTV+ + C + +T NGY A+Q+G + Sbjct: 1 MSIGIFGNKIGMTQIFDKNGLALPVTVVSVGPCFITQLKTEKTNGYDAIQIGYSKGHTSK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK G +SP L E+RV D +G + + F VGQ V+VTG +IGKGF Sbjct: 61 FSKAELGHLEKNGLSPLYHLCEYRV-NDLKNYSLGQILTVDNFQVGQFVNVTGKSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRH F THG S +HR+ GS G PGRVF K MAG++G ++TV LE++ Sbjct: 120 SGNQKRHKFKRGPMTHG-SKNHRAPGSIGPGTTPGRVFPGKLMAGQLGAKKITVSKLEIL 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 +D K+ L+++KG VPG N ++ Sbjct: 179 GIDSKQNLLILKGSVPGKPGNLLNII 204 >gi|225710684|gb|ACO11188.1| Mitochondrial 39S ribosomal protein L3 [Caligus rogercresseyi] Length = 342 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 83/210 (39%), Positives = 118/210 (56%), Gaps = 4/210 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59 R G+VA KLGM V+ G R VT+L + +C V+ + + +K +G+ A + VG A Sbjct: 91 RVGLVAVKLGMAPVWTKTGERHVVTMLQVQDCHVLNYLSKEKYDGHTAALVVGGKNASPF 150 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + F V PK+K+ F+V D+ ++ G+ ++F GQ VDVT TIGKG Sbjct: 151 YKTDEEMEMFRLAGVPPKQKVTTFKVS-DNAIIKPGTPLYAAHFRPGQYVDVTAKTIGKG 209 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR+ F G A+HG + +HR G++G DP +VFK KKM G MG T L+V Sbjct: 210 FQGVMKRYGFKGQPASHGQTKTHRRPGASGPGGDPAKVFKGKKMPGMMGNVFDTAHGLKV 269 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 V+ + +I V G VPG KN + VRD+ Sbjct: 270 WRVNTRYNVIYVHGSVPG-HKNCLLKVRDT 298 >gi|41053377|ref|NP_956301.1| 39S ribosomal protein L3, mitochondrial [Danio rerio] gi|33416933|gb|AAH55650.1| Mitochondrial ribosomal protein L3 [Danio rerio] gi|94734481|emb|CAK11310.1| mitochondrial ribosomal protein L3 [Danio rerio] Length = 319 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 84/220 (38%), Positives = 117/220 (53%), Gaps = 4/220 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYM-AVQVGAGEAKVK 59 R G+VA KLGM V++ G R VT+L + +C VV H + + NG+ A+ VG Sbjct: 70 RVGLVAIKLGMMPVWSKSGERHVVTMLQVKDCHVVKHLSKEDYNGHTSALVVGGKNVSPF 129 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + F + + PK+KL F V D+ ++ G+ ++F GQ VDVT TIGKG Sbjct: 130 HRPVGYLEIFQNAGIPPKQKLTTFCVT-DNAIIKPGTPLYAAHFRPGQYVDVTAKTIGKG 188 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR F G A+HG + +HR G+ G DP +VFK KM GRMG T L++ Sbjct: 189 FQGVMKRWGFKGQPASHGQTKTHRRPGALGPGGDPAKVFKGTKMPGRMGNVYNTNFGLKI 248 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 V+ K ++ V G VPG +N + VRD+ K K Sbjct: 249 WRVNTKYNILYVNGSVPG-HRNCLVKVRDTVLPTRLEKNK 287 >gi|268316408|ref|YP_003290127.1| 50S ribosomal protein L3 [Rhodothermus marinus DSM 4252] gi|262333942|gb|ACY47739.1| ribosomal protein L3 [Rhodothermus marinus DSM 4252] Length = 210 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 90/211 (42%), Positives = 118/211 (55%), Gaps = 6/211 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVKNV 61 SG++ RK+GMT V++ G IP T++ + VV +T + K+GY AVQ+G GE K K Sbjct: 2 SGMLGRKIGMTQVFDQAGNCIPCTIIQAEPNAVVQVKTAEGKDGYEAVQLGYGERKPKRT 61 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGF 120 ++ M G F VSPK+ L EF+ D + G F G+L+DV G+T G+GF Sbjct: 62 TRAMLGHFEKAGVSPKQVLREFKNFVLD--VKPGDEVRVEQLFREGELIDVVGITKGRGF 119 Query: 121 SGAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 G +KRH FGG THG R+ GS G P VFK +MAGRMG RV VKNL V Sbjct: 120 QGVVKRHGFGGVGARTHGQHNRERAPGSIGASSFPSHVFKGMRMAGRMGNQRVKVKNLRV 179 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V + + LILVKG VPG N + + Sbjct: 180 VRIFPEHNLILVKGAVPGPV-NGIVELYKKV 209 >gi|148284214|ref|YP_001248304.1| 50S ribosomal protein L3 [Orientia tsutsugamushi str. Boryong] gi|146739653|emb|CAM79442.1| 50S ribosomal protein L3 [Orientia tsutsugamushi str. Boryong] Length = 229 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 107/211 (50%), Positives = 143/211 (67%), Gaps = 2/211 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 RSG++A KLGM+ ++ GR++ +T+L +D CQV+ H+ + K+GY AV +G V Sbjct: 18 RSGLIAEKLGMSSKFDESGRKVAITLLKVDVCQVLWHKLVSKDGYNAVILGYKNISPFKV 77 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KPM FS + PK + EF+V +D +L + S+ SYF VGQ VDV G+TIGKGF+ Sbjct: 78 KKPMHSIFSRAKIEPKAIIKEFKVAEDK-MLEIASILDASYFRVGQYVDVRGVTIGKGFA 136 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 GAMKRH F GL A+HGVSISHRSHGSTG R PGR FKNKKMAG MG T++NL V S Sbjct: 137 GAMKRHGFRGLEASHGVSISHRSHGSTGNRAYPGRTFKNKKMAGHMGVRFATIQNLRVDS 196 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++ L++++G +PG K S + + DS K Sbjct: 197 VDLEKRLLVIQGSIPG-KSGSIVYITDSIKK 226 >gi|254674251|emb|CBA10035.1| 50S ribosomal protein L3 [Neisseria meningitidis alpha275] Length = 196 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 89/193 (46%), Positives = 117/193 (60%), Gaps = 2/193 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG Sbjct: 61 VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + L+V Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGTPKH-CSKLKV 179 Query: 180 VSVDDKRGLILVK 192 V VD +R L+ VK Sbjct: 180 VRVDAERQLLWVK 192 >gi|172056140|ref|YP_001812600.1| 50S ribosomal protein L3 [Exiguobacterium sibiricum 255-15] gi|226725176|sp|B1YGV0|RL3_EXIS2 RecName: Full=50S ribosomal protein L3 gi|171988661|gb|ACB59583.1| ribosomal protein L3 [Exiguobacterium sibiricum 255-15] Length = 208 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 131/212 (61%), Gaps = 5/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT ++N G +PVTV+ ++ V+ +T++ +GY AVQ+G G+ K Sbjct: 1 MAKGILGTKLGMTQIFNESGEVVPVTVVSVEGNVVLQLKTMEVDGYEAVQLGFGDIKEGR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + + +PK+ + E R D +G F G++VDVTG + GKGF Sbjct: 61 QNKPQKGHAAKASATPKRFIKEIRTSVTD--FEIGQEIKADTFAAGEMVDVTGTSKGKGF 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +GA+KRHN HG S HR GS G P RVFK K + GRMGG +VTV+NLE+V Sbjct: 119 AGAIKRHNQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGEQVTVQNLEIV 176 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD +RGL+LVKG +PGA+K S ++V+ + K Sbjct: 177 KVDVERGLLLVKGAIPGARK-SQVVVKTAVKG 207 >gi|57234686|ref|YP_181218.1| 50S ribosomal protein L3 [Dehalococcoides ethenogenes 195] gi|109893425|sp|Q3Z981|RL3_DEHE1 RecName: Full=50S ribosomal protein L3 gi|57225134|gb|AAW40191.1| ribosomal protein L3 [Dehalococcoides ethenogenes 195] Length = 205 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 127/211 (60%), Gaps = 6/211 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ +G+ PVT++ C VV +T ++GY AVQ+G G+AK + Sbjct: 1 MIQGIIGKKIGMTQIFQEDGKAQPVTLVEAGPCVVVQVKTEKQDGYEAVQLGYGKAK--H 58 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++ ++G K L E V D + VG + S F G+ +D +G++ G+GF Sbjct: 59 ITSAVKGQCR--GFGEFKVLREVDVD-DIAAVNVGDQITVSDFKDGEKIDASGVSRGRGF 115 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR +F G THG S HR+ GS PGR++K K+MAG MG + VT++NL V+ Sbjct: 116 AGVVKRWHFAGGPKTHGQSDRHRAPGSISSTTTPGRIYKGKRMAGHMGNDAVTIRNLVVL 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D ++ L++VKG +PG KN+ IL++ + K Sbjct: 176 KTDAEKNLLMVKGAIPGG-KNTIILIKKTGK 205 >gi|225560374|gb|EEH08655.1| 50S ribosomal protein L3 [Ajellomyces capsulatus G186AR] Length = 301 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 91/215 (42%), Positives = 139/215 (64%), Gaps = 3/215 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GMT +++ G+RIP T+L LD QV+ H+TL KNGY AVQ+G G + Sbjct: 71 LRTGTLAIKKGMTAIFDLETGKRIPCTILQLDRVQVISHKTLRKNGYYAVQIGCGWKHER 130 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V++PM G F++ V+PK+ + EFRV+ ++ LLP+G + + ++F GQ VD + G G Sbjct: 131 AVTRPMLGHFAANGVAPKRHIHEFRVKDENGLLPIGEMINANWFQEGQYVDARSNSRGMG 190 Query: 120 FSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKRH F G +HGVS++HR S + RV+ KKMAG MG +VT++NL+ Sbjct: 191 FAGVMKRHGFHGQDRSHGVSLTHRSMGSSGPGQGGGSRVYPGKKMAGNMGNKQVTLQNLK 250 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V+ VD ++G+++V G V G K + ++D+ K Sbjct: 251 VLKVDAEKGIVVVNGSVSGP-KGCIVKLQDALKKP 284 >gi|251772490|gb|EES53056.1| Ribosomal protein L3 [Leptospirillum ferrodiazotrophum] Length = 204 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 89/204 (43%), Positives = 125/204 (61%), Gaps = 3/204 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ K+GMT +Y G+ IPVTV+ + C+V+ +T +K+ Y AVQ+G G K +++KP Sbjct: 4 IIGEKIGMTQIYLPNGKSIPVTVVKVGPCEVIQVKTKEKDRYSAVQLGYGIVKPVSLNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +RG F + + + + E V D P GS++ +F G+LV TGMT GKGF+G M Sbjct: 64 LRGHFQKYSQNTYRTIRE--VVILGDPPPSGSIYGADFFKPGELVSATGMTKGKGFAGVM 121 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH+F G ATHG S+ HR GS G P RV KNKK+ G MG +VT+KNLEVV V Sbjct: 122 KRHHFRGGDATHG-SMFHREPGSIGSSAYPSRVLKNKKLPGHMGHKKVTIKNLEVVEVKA 180 Query: 185 KRGLILVKGCVPGAKKNSWILVRD 208 + L+L+KG VPG + +D Sbjct: 181 EANLVLLKGAVPGHPGTILVFKKD 204 >gi|269122979|ref|YP_003305556.1| 50S ribosomal protein L3 [Streptobacillus moniliformis DSM 12112] gi|268314305|gb|ACZ00679.1| ribosomal protein L3 [Streptobacillus moniliformis DSM 12112] Length = 208 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 85/209 (40%), Positives = 123/209 (58%), Gaps = 4/209 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ +K+GMT ++ + IPVTV+ VV +T++K GY ++ + E + K V+KP Sbjct: 2 ILGKKIGMTQIF-ENEKLIPVTVIEAGPNFVVQTKTVEKEGYTSITLAYDEKREKLVNKP 60 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G F ++ KK L EF+V+ + +G + VD+ G++ GKG +G M Sbjct: 61 EMGVFKKAGITAKKFLKEFKVES-VEEFALGQELKVDVLEGIEFVDIQGISKGKGTAGVM 119 Query: 125 KRHNFGGLRATHGVSISHRSHGST-GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 KRHNFGG RATHGVS +HR GS G V K KKMAGR+G VTV+NL+VV D Sbjct: 120 KRHNFGGNRATHGVSRNHRLGGSNAGGAASNSNVPKGKKMAGRLGNENVTVQNLKVVKFD 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + L+LVKG VPG KN +++++ S K Sbjct: 180 VENNLLLVKGAVPGP-KNGYLVIKKSIKK 207 >gi|62857890|ref|NP_001016594.1| mitochondrial ribosomal protein L3 [Xenopus (Silurana) tropicalis] gi|89272068|emb|CAJ81305.1| mitochondrial ribosomal protein L3 [Xenopus (Silurana) tropicalis] gi|134024406|gb|AAI35276.1| mitochondrial ribosomal protein L3 [Xenopus (Silurana) tropicalis] Length = 341 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 109/211 (51%), Gaps = 5/211 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59 R GV+A KLGM ++ G R VT+L + +C VV + ++ +G A + VG Sbjct: 91 RVGVIAVKLGMMPIWTKSGDRHAVTMLQVRDCHVVKYTPKEEFDGKTASLTVGGKNVSPF 150 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + + V PK+K+ F+V D+ +L G+ ++F GQ VD+T TIGKG Sbjct: 151 YKPESAMELYREAGVPPKQKISIFKVS-DNAILKPGTPLYAAHFRPGQFVDITAKTIGKG 209 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR + G A+HG + +HR G+ DP RVF KM GRMG T L+V Sbjct: 210 FQGVMKRWGYKGQPASHGQTKTHRRPGAI-SSGDPARVFPGTKMPGRMGNVYRTSYALKV 268 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V+ K +I V G VPG N + V D+ Sbjct: 269 WRVNTKHNIIYVNGSVPG-HTNCLVKVTDTK 298 >gi|302908346|ref|XP_003049847.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256730783|gb|EEU44134.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 333 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 98/219 (44%), Positives = 137/219 (62%), Gaps = 3/219 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+GV+A K GMT V+ + R+P TVL LD QV+ ++T +KNGY AVQ+G+G +N Sbjct: 76 LRTGVLAIKKGMTSVF-VGKVRVPCTVLQLDQVQVIANKTREKNGYWAVQIGSGSRDGRN 134 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ PM G++ + ++PK L EF V+ LLPVG P +F GQ VDV + G GF Sbjct: 135 VTSPMLGYYEAKGIAPKADLAEFMVRDQSGLLPVGVQILPDWFKKGQYVDVKSRSRGMGF 194 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179 +G MKRH F G A+HG S +HR+ G+TG Q G RV KKM GRMG VTV+NL+V Sbjct: 195 AGGMKRHGFSGQEASHGNSKNHRTIGTTGPSQGGGSRVLPGKKMPGRMGNEFVTVQNLKV 254 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 + VD++ G++LV G + G K + ++DS K + Sbjct: 255 MMVDNELGVVLVSGPIAGP-KGRVVRLQDSKKRKAPPQP 292 >gi|328872429|gb|EGG20796.1| ribosomal protein L3 [Dictyostelium fasciculatum] Length = 333 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 106/208 (50%), Positives = 138/208 (66%), Gaps = 3/208 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G + +KLGMT VY ++ IPVTV+ L + QVV + +G AVQVGAGE K+KN+ Sbjct: 64 RVGAIGKKLGMTTVY-VDHVAIPVTVIELPDNQVVQVKRKVNDGSNAVQVGAGEIKLKNI 122 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 ++G F+ +V PK+ + EF+V K + VG+ +F GQLV V G + GKGF+ Sbjct: 123 GGTLKGHFAKADVPPKRVVMEFKVTKG-GFMDVGTSIDARHFVPGQLVKVQGTSTGKGFA 181 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR NF GL ATHGVS +HRS GSTGCRQ PGRVFK KKM GR+GG TV NL+VV Sbjct: 182 GGMKRWNFSGLLATHGVSKTHRSIGSTGCRQTPGRVFKGKKMPGRLGGQSSTVNNLQVVK 241 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209 ++ + +I+VKG VPG K ++ V DS Sbjct: 242 INSELNVIMVKGAVPG-KNGGYLRVTDS 268 >gi|66805433|ref|XP_636449.1| ribosomal protein L3, mitochondrial [Dictyostelium discoideum AX4] gi|60464827|gb|EAL62946.1| ribosomal protein L3, mitochondrial [Dictyostelium discoideum AX4] Length = 351 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 100/208 (48%), Positives = 135/208 (64%), Gaps = 2/208 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G + +K+GM Y + PVTV+ L N QV + +G +QVGA E K+KNV Sbjct: 66 RVGAIGKKVGMLTTYIGD-IAYPVTVIQLPNNQVTQIKRKVNDGVDMIQVGADEIKLKNV 124 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SK ++G F+ NV PK+ L EFRV ++ L +G+ P +F GQL+ V G GKGF+ Sbjct: 125 SKTLQGHFAKANVPPKRVLMEFRVTRNAMNLELGTPILPKHFLPGQLITVKGTNTGKGFA 184 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR +F G ATHGVS++HR+ GSTGCRQ PGRVFK +KM GR+GG TVKNL+V+ Sbjct: 185 GGMKRWHFSGQPATHGVSLTHRAIGSTGCRQTPGRVFKGRKMPGRLGGKSCTVKNLQVLK 244 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209 ++ + +LVKG VPG KK ++ + DS Sbjct: 245 INTEMNCLLVKGAVPG-KKGGYLKITDS 271 >gi|270307842|ref|YP_003329900.1| ribosomal protein L3 [Dehalococcoides sp. VS] gi|270153734|gb|ACZ61572.1| ribosomal protein L3 [Dehalococcoides sp. VS] Length = 205 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 127/211 (60%), Gaps = 6/211 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ +G+ PVT++ C VV +T ++GY AVQ+G G+AK + Sbjct: 1 MIQGIIGKKIGMTQIFQEDGKAQPVTLVEAGPCVVVQVKTEKQDGYEAVQLGYGKAK--H 58 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++ ++G K L E V D + VG + S F G+ +D +G++ G+GF Sbjct: 59 ITSAVKGQCR--GFGEFKVLREVDVD-DIATVNVGDQITVSDFKDGEKIDASGVSRGRGF 115 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR +F G THG S HR+ GS PGR++K K+MAG MG + VT++NL V+ Sbjct: 116 AGVVKRWHFAGGPKTHGQSDRHRAPGSISSTTTPGRIYKGKRMAGHMGNDAVTIRNLVVL 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D ++ L++VKG +PG KN+ IL++ + K Sbjct: 176 KTDAEKNLLMVKGAIPGG-KNTIILIKKTGK 205 >gi|326437537|gb|EGD83107.1| hypothetical protein PTSG_03748 [Salpingoeca sp. ATCC 50818] Length = 307 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 98/214 (45%), Positives = 143/214 (66%), Gaps = 2/214 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++ARKLGMT + + G R+P+T +++ QVV H+T+D++GY A+++GA + + V Sbjct: 63 RTGILARKLGMTQTFTLWGERVPLTAFQIEDLQVVEHKTVDRDGYSAMRLGAVNLEPRKV 122 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP+ G F + PK+ + EFRV +D +LP+G+ S S+F GQ VDV G+TIGKGF Sbjct: 123 KKPVLGQFRKHKLPPKQHVAEFRVTEDC-ILPIGTHISCSHFIPGQYVDVQGVTIGKGFQ 181 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF G+ A+HGV+++HR G G QDPGRV+K K+M GRMGG + L+V Sbjct: 182 GVMKRHNFKGMPASHGVTLTHRKAGGLGGGQDPGRVWKGKRMEGRMGGVKRYQFGLQVYQ 241 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +D + L+ V G PGA KNS + +RD+ + Sbjct: 242 IDTRYNLLYVVGSAPGA-KNSIVKIRDAMYKPPS 274 >gi|299139130|ref|ZP_07032306.1| 50S ribosomal protein L3 [Acidobacterium sp. MP5ACTX8] gi|298598810|gb|EFI54972.1| 50S ribosomal protein L3 [Acidobacterium sp. MP5ACTX8] Length = 242 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 75/220 (34%), Positives = 122/220 (55%), Gaps = 7/220 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVKNV 61 +G++ +K+GMT +++ G PVTVL + C + +T +GY A Q+G E K + Sbjct: 4 TGILGKKIGMTQLFDDRGDIHPVTVLKVGPCVITQLKTQQTDGYSAAQIGLVEFVKASKI 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEF---RVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 +K M G F+ NV P +++ E V++ ++ G + F + VDV G + G+ Sbjct: 64 NKAMTGHFAKSNVPPVREIREVQIEFVEEGEEAPKAGDRVTVEIFNETRFVDVIGNSKGR 123 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF+G ++RH FGG +HG + GS G P RVF ++M G MG N+VTV+NL Sbjct: 124 GFAGVIRRHGFGGGPKSHGHMF--QVQGSIGASSFPSRVFPGQRMPGHMGTNQVTVRNLR 181 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 + +D + L+LV+G VPGA ++ ++LV + +G Sbjct: 182 IRGIDVEDNLLLVEGAVPGA-RDGYVLVSKAVAPPRERRG 220 >gi|260909750|ref|ZP_05916444.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 472 str. F0295] gi|260636175|gb|EEX54171.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 472 str. F0295] Length = 204 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 81/205 (39%), Positives = 118/205 (57%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V++ +G+ +P TV+ C V +T++ +GY AVQ+ GEAK +K Sbjct: 3 GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVETDGYNAVQLAYGEAKKNRTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 M G F +PKK L EF+ + +G + F + VDV G + GKGF G Sbjct: 63 AMAGIFDKAGTTPKKHLAEFKFDTE---YNLGDTITVDLFEGAEFVDVVGTSKGKGFQGV 119 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG + THG R GS G P +VFK +M G+MGG+RVT +NL+V+ V Sbjct: 120 VKRHGFGGVGQTTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLKVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + LILVKG V G ++ ++ + Sbjct: 180 IPEHNLILVKGSVAGCNGSTLLIKK 204 >gi|256544506|ref|ZP_05471879.1| 50S ribosomal protein L3 [Anaerococcus vaginalis ATCC 51170] gi|256399831|gb|EEU13435.1| 50S ribosomal protein L3 [Anaerococcus vaginalis ATCC 51170] Length = 209 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 88/208 (42%), Positives = 125/208 (60%), Gaps = 3/208 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 + K+GMT V + +G PVTVL D +V ++ + +GY ++Q+G + K KNV KP Sbjct: 4 IFTTKVGMTQVIDEDGVVTPVTVLKADENVIVQVKSEEVDGYNSIQIGYHDKKEKNVKKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 ++G F S K+ L E R+ + +L P G S F G+LVD+T ++ GKG GA+ Sbjct: 64 IKGHFDKAGASYKRFLREVRLDEKSELNP-GDTLSVDQFEEGELVDITAISKGKGTQGAI 122 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR N+G A+HG S SHR G+ DP RVFK +K +G+MG RVTV+NL+VV V+ Sbjct: 123 KRWNYGRGPASHG-SKSHRVAGARAAGSDPARVFKGRKGSGKMGHERVTVQNLKVVKVNT 181 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212 + ILVKG VPG K + V+ + KS Sbjct: 182 EDSYILVKGAVPGP-KGGLVQVKQATKS 208 >gi|330819132|ref|XP_003291618.1| hypothetical protein DICPUDRAFT_39301 [Dictyostelium purpureum] gi|325078183|gb|EGC31848.1| hypothetical protein DICPUDRAFT_39301 [Dictyostelium purpureum] Length = 340 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 100/208 (48%), Positives = 138/208 (66%), Gaps = 2/208 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G + +K+GM Y I PVTV+ + N QV + K+G VQ+GA E ++KNV Sbjct: 58 RMGAIGKKVGMMTTY-IGAEAYPVTVIQIPNNQVTQVKRKIKDGANMVQIGADEIRMKNV 116 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP+RG F+ NV+PK+ L EF+V + + +G+ +F GQLV V G + GKGF+ Sbjct: 117 PKPLRGHFAKANVTPKRILMEFKVTNNALNIDLGTPILARHFVPGQLVTVKGKSSGKGFA 176 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR NF G ATHGVS++HRS G+TG RQ PGRVFKN+KM GR+GG TVKNL+++ Sbjct: 177 GGMKRWNFRGQPATHGVSLTHRSIGATGNRQTPGRVFKNRKMPGRLGGESCTVKNLQILK 236 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209 ++++ I+VKG VPG KK S++ + DS Sbjct: 237 INNELNCIMVKGAVPG-KKGSYLKIIDS 263 >gi|238898927|ref|YP_002924609.1| 50S ribosomal subunit protein L3 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259646549|sp|C4K7B8|RL3_HAMD5 RecName: Full=50S ribosomal protein L3 gi|229466687|gb|ACQ68461.1| 50S ribosomal subunit protein L3 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 210 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 96/210 (45%), Positives = 135/210 (64%), Gaps = 1/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +KLGMT ++ +G IPVTV+ + +V + LD +GY+A+Q+ G K V+ Sbjct: 2 KGLVGKKLGMTRIFTKDGISIPVTVIEIKANRVTQIKNLDSDGYLALQITTGTKKASRVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ NV + L+EFRV + D + +G F S F G +VDVTG + GKGFSG Sbjct: 62 KPKAGHFAKANVEAGRGLWEFRVSEQDATVFLGHTFEVSMFKPGDIVDVTGKSKGKGFSG 121 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF A+HG S+SHR GS G Q PG+VFK KKM+G++G RVT++NLEVV V Sbjct: 122 TVKRWNFRTQDASHGNSLSHRVPGSIGQNQTPGKVFKGKKMSGQLGNERVTIQNLEVVRV 181 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D R ++L+KG VPGA ++V+ + K+ Sbjct: 182 DVVREILLIKGGVPGAV-GKDVIVKLAVKA 210 >gi|294507051|ref|YP_003571109.1| 50S ribosomal protein L3 [Salinibacter ruber M8] gi|294343379|emb|CBH24157.1| 50S ribosomal protein L3 [Salinibacter ruber M8] Length = 208 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 81/201 (40%), Positives = 111/201 (55%), Gaps = 4/201 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M SG++ +K+GMT V++ EG + TV+ V ++ ++GY AVQ+G K KN Sbjct: 1 MSSGLIGKKVGMTSVFDDEGNNVACTVVEAGPNVVTQVKSEGRDGYSAVQLGFDNVKEKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119 V++ M G F PK+ L EFR DD + +G V F + +DV G++ GKG Sbjct: 61 VTQAMLGHFEKAGCPPKRMLSEFRDFGDD--VDLGDVVRVEDLFQEDERIDVVGVSKGKG 118 Query: 120 FSGAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 F G +KRH F G THG S R GS G DP RVFK +MAG+ GG R ++NL Sbjct: 119 FQGVVKRHGFSGVGMMTHGQSDRQRHPGSIGASADPSRVFKGVRMAGQTGGERTKIQNLR 178 Query: 179 VVSVDDKRGLILVKGCVPGAK 199 VV + + IL+ G VPG K Sbjct: 179 VVRILADQNAILIHGSVPGPK 199 >gi|257064320|ref|YP_003143992.1| LSU ribosomal protein L3P [Slackia heliotrinireducens DSM 20476] gi|256791973|gb|ACV22643.1| LSU ribosomal protein L3P [Slackia heliotrinireducens DSM 20476] Length = 206 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 88/209 (42%), Positives = 121/209 (57%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M + + +K+GMT ++N + + +P TV+ + +V +T D +GY AVQ+G G K + Sbjct: 1 MINAIYGKKIGMTQLFNEDEKVVPCTVIVAEPNKVCQIKTTDTDGYEAVQLGFGAIKPQK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM G F+ + P + L E RV+ D VG + + F + V VTG +IGKGF Sbjct: 61 VNKPMAGHFAKLGTEPTRYLREVRVENAAD-YKVGDLQTVEAFADVKKVHVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH F G HG HR+ GS G P RV K +M G MG N VT KNLEVV Sbjct: 120 QGVIKRHGFRGGPGGHGAH-FHRAPGSVGMCATPSRVLKGVRMPGHMGCNTVTTKNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +D ++ LILVKG VPGA K + VR + Sbjct: 179 RIDAEQNLILVKGAVPGA-KGGIVRVRMA 206 >gi|122692439|ref|NP_001073786.1| 39S ribosomal protein L3, mitochondrial [Bos taurus] gi|88932613|sp|Q3ZBX6|RM03_BOVIN RecName: Full=39S ribosomal protein L3, mitochondrial; Short=L3mt; Short=MRP-L3 gi|73586745|gb|AAI03048.1| Mitochondrial ribosomal protein L3 [Bos taurus] gi|296490939|gb|DAA33052.1| 39S ribosomal protein L3, mitochondrial [Bos taurus] Length = 348 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 75/216 (34%), Positives = 115/216 (53%), Gaps = 5/216 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGY-MAVQVGAGEAKVK 59 R G+VA KLGM ++ +G++ VT+L + +C V+ + + NG A+ VG Sbjct: 96 RVGLVALKLGMMPLWTKDGKKHVVTLLQVQDCHVLKYTPKENHNGKMAALTVGGKTVSRF 155 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + S + F+ + + PK+K+ F V D+ ++ G+ ++F GQ VDVT TIGKG Sbjct: 156 HKSTSILEFYQELGLPPKQKIKMFNVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 214 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR F G ATHG + +HR G+ D RV+ KM G++G T L+V Sbjct: 215 FQGVMKRWGFKGQPATHGQTKTHRRPGAI-STGDVARVWPGTKMPGQLGNVDRTAFGLKV 273 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++ K +I V G VPG +N + ++DS A Sbjct: 274 WRINTKHNIIYVNGSVPG-HRNCLVKIKDSVLPAYK 308 >gi|298373698|ref|ZP_06983687.1| 50S ribosomal protein L3 [Bacteroidetes oral taxon 274 str. F0058] gi|298274750|gb|EFI16302.1| 50S ribosomal protein L3 [Bacteroidetes oral taxon 274 str. F0058] Length = 206 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 81/205 (39%), Positives = 121/205 (59%), Gaps = 5/205 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ P TV+ + C V +T++K+GY A Q+G E K K+ +K Sbjct: 3 GLIGKKVGMTSVFSADGKNTPCTVIEVGPCVVTQVKTVEKDGYQAYQLGFEEKKEKHTNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSG 122 G F VS ++ L EF+ D L G + F VDV G++ GKGF G Sbjct: 63 AEAGHFKKAGVSARRNLVEFK--SFDKELKAGDTVTADAVFEENDFVDVVGISKGKGFQG 120 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH FGG + THG R+ GS G P +V K +MAGR GG+RVT++NL+VV Sbjct: 121 VVKRHGFGGVGQQTHGQHNRGRAPGSMGASSYPSKVVKGMRMAGRTGGDRVTIQNLQVVK 180 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 + + +++VKG +PGA K S +L+ Sbjct: 181 IIPEHNIVMVKGSIPGA-KGSIVLI 204 >gi|254495341|ref|ZP_05108265.1| 50S ribosomal protein L3 [Polaribacter sp. MED152] gi|213690665|gb|EAQ40852.2| 50S ribosomal protein L3 [Polaribacter sp. MED152] Length = 195 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 80/197 (40%), Positives = 120/197 (60%), Gaps = 4/197 (2%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT +++ G+ IP TV+ C V RT + +GY A+Q+G + K K+ +K + G F Sbjct: 1 MTSLFDENGKNIPCTVIEAGPCVVTQVRTEEVDGYNALQLGFDDKKAKSSNKALDGHFKK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 + KKK+ EF+ + + +G + +FT G+ VDV+G + GKGF G +KRH FGG Sbjct: 61 AGTTAKKKVVEFQGFE--EEYKLGDAITVEHFTEGEFVDVSGTSKGKGFQGVVKRHGFGG 118 Query: 132 -LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190 +ATHG R+ GS G P RVFK +MAGRMGG +V V+NL V+ V ++ L++ Sbjct: 119 VGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGEKVKVQNLRVLKVVAEKNLLV 178 Query: 191 VKGCVPGAKKNSWILVR 207 VKG VPG KN+++ ++ Sbjct: 179 VKGAVPG-HKNAFVTIQ 194 >gi|218282171|ref|ZP_03488470.1| hypothetical protein EUBIFOR_01052 [Eubacterium biforme DSM 3989] gi|218216850|gb|EEC90388.1| hypothetical protein EUBIFOR_01052 [Eubacterium biforme DSM 3989] Length = 235 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 83/224 (37%), Positives = 123/224 (54%), Gaps = 7/224 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RKLGMT V+ +G IPVTV+ + V+ +T++ +GY AVQ+G E K K Sbjct: 5 MMKGLLGRKLGMTQVFTEDGVLIPVTVVEVTPNVVLQKKTVETDGYNAVQLGFEEIKEKR 64 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +K G N SPK+ + E V+ D + VG + + F G+ VDV G + GKG+ Sbjct: 65 TTKANIGHCKKANTSPKRFIKE--VRDCDMDVNVGDLVNVDIFAAGETVDVIGTSKGKGY 122 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGST---GCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 +G + R+N THG S + R GS G GR+ K MAG+ GG T +NL Sbjct: 123 NGTIVRNNAHQGPKTHGGSKNIRHIGSLATNGITSRQGRIMKGTIMAGQEGGYTTTNQNL 182 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 V+ VD + +L+KG VPG +K ++VR + K++ K V+ Sbjct: 183 TVIKVDTENNYMLIKGNVPGPRKGC-VMVRTA-KTSKGDKEPVT 224 >gi|262199869|ref|YP_003271078.1| 50S ribosomal protein L3 [Haliangium ochraceum DSM 14365] gi|262083216|gb|ACY19185.1| 50S ribosomal protein L3 [Haliangium ochraceum DSM 14365] Length = 243 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 91/216 (42%), Positives = 129/216 (59%), Gaps = 4/216 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MR G++ +KLGMT V+ +G RIPVTV+ VV RT +++GY A+ VG GE + Sbjct: 3 MRMGILGKKLGMTQVFAEDGERIPVTVIQTGPNYVVGKRTEERDGYSALVVGFGEKPARL 62 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSP-SYFTVGQLVDVTGMTIGK 118 +KP+ G F V P + EFR+ D+ VG F G +DVTG + GK Sbjct: 63 ANKPLAGQF-KNGVKPPRMQREFRLPADEVAKYEVGQELKISEVFEAGIPLDVTGTSKGK 121 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G+ G MKRHN G +A+HGV R GS GCR PGRV K K+M+GRMGG R TV+NL+ Sbjct: 122 GYQGVMKRHNMSGTKASHGVHEYFRHGGSIGCRLTPGRVHKGKRMSGRMGGERKTVQNLQ 181 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 +V + ++ +LV+G +PG + ++++R + AV Sbjct: 182 LVQILEEDNAVLVRGAIPGPNQG-YVMLRKAATRAV 216 >gi|325088644|gb|EGC41954.1| 50S ribosomal protein [Ajellomyces capsulatus H88] Length = 301 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 91/215 (42%), Positives = 139/215 (64%), Gaps = 3/215 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GMT +++ G+RIP T+L LD QV+ H+TL KNGY AVQ+G G + Sbjct: 71 LRTGTLAIKKGMTAIFDLETGKRIPCTILQLDRVQVISHKTLKKNGYYAVQIGCGWKHER 130 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V++PM G F++ V+PK+ + EFRV+ ++ LLP+G + + ++F GQ VD + G G Sbjct: 131 AVTRPMLGHFAANGVAPKRHIHEFRVKDENGLLPIGEMINANWFQEGQYVDARSNSRGMG 190 Query: 120 FSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKRH F G +HGVS++HR S + RV+ KKMAG MG +VT++NL+ Sbjct: 191 FAGVMKRHGFHGQDRSHGVSLTHRSMGSSGPGQGGGSRVYPGKKMAGNMGNKQVTLQNLK 250 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 V+ VD ++G+++V G V G K + ++D+ K Sbjct: 251 VLKVDAEKGIVVVNGNVSGP-KGCIVKLQDALKKP 284 >gi|83816242|ref|YP_445167.1| 50S ribosomal protein L3 [Salinibacter ruber DSM 13855] gi|109893553|sp|Q2S3R4|RL3_SALRD RecName: Full=50S ribosomal protein L3 gi|83757636|gb|ABC45749.1| ribosomal protein L3 [Salinibacter ruber DSM 13855] Length = 208 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 81/201 (40%), Positives = 111/201 (55%), Gaps = 4/201 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M SG++ +K+GMT V++ EG + TV+ V ++ ++GY AVQ+G K KN Sbjct: 1 MSSGLIGKKVGMTSVFDDEGNNVACTVVEAGPNVVTQVKSEGRDGYSAVQLGFDNVKEKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119 V++ M G F PK+ L EFR DD + +G V F + +DV G++ GKG Sbjct: 61 VTQAMLGHFEKAGCPPKRMLSEFRDFGDD--VDLGDVVRVQDLFQEDERIDVVGVSKGKG 118 Query: 120 FSGAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 F G +KRH F G THG S R GS G DP RVFK +MAG+ GG R ++NL Sbjct: 119 FQGVVKRHGFSGVGMMTHGQSDRQRHPGSIGASADPSRVFKGVRMAGQTGGERTKIQNLR 178 Query: 179 VVSVDDKRGLILVKGCVPGAK 199 VV + + IL+ G VPG K Sbjct: 179 VVRILADQNAILIHGSVPGPK 199 >gi|149729728|ref|XP_001497211.1| PREDICTED: similar to Mitochondrial ribosomal protein L3 [Equus caballus] Length = 348 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 76/216 (35%), Positives = 113/216 (52%), Gaps = 5/216 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGY-MAVQVGAGEAKVK 59 R G++A KLGM ++ +G++ T+L + +C V+ + + NG A+ VG Sbjct: 96 RVGLIALKLGMMPLWTKDGQKHVATLLQVQDCHVLKYTPKENHNGKRAALTVGGKTVSRF 155 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 S + F+ + + PK+K+ F V D+ ++ G+ ++F GQ VDVT TIGKG Sbjct: 156 RKSTSILEFYQELGLPPKQKVKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 214 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR F G ATHG + +HR G+ D RV+ KM G+MG T L+V Sbjct: 215 FQGVMKRWGFKGQPATHGQTKTHRRPGAI-STGDVARVWPGTKMPGQMGNIDRTAYGLKV 273 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++ K +I V G VPG KN + +RDS A Sbjct: 274 WRINTKHNIIYVNGSVPG-HKNCLVKIRDSKLPAYK 308 >gi|256420659|ref|YP_003121312.1| ribosomal protein L3 [Chitinophaga pinensis DSM 2588] gi|256035567|gb|ACU59111.1| ribosomal protein L3 [Chitinophaga pinensis DSM 2588] Length = 205 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 78/206 (37%), Positives = 115/206 (55%), Gaps = 4/206 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GMT +++ GR+ VT++ C V +T++ +GY A+QV GE K KN Sbjct: 2 KGIIGKKIGMTSIFDQNGRQTAVTIIEAGPCVVTQVKTVETDGYNAIQVSFGEKKEKNTP 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K F+ + SPK+ + EFR D +G + F G+ +DV G + GKGF G Sbjct: 62 KAELNHFAKASTSPKRFVKEFR--NPDVQKALGETITTEIFAEGETIDVVGTSKGKGFQG 119 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH F G ATHG R+ GS G P RVFK +MAG+ G +V VK L++V Sbjct: 120 VVKRHGFSGVGEATHGQHDRSRAPGSVGGSSYPSRVFKGMRMAGQTGNEQVKVKGLKIVK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 + ++ ILV G VPG S +L++ Sbjct: 180 IFAEKNYILVSGSVPG-HNGSIVLIQ 204 >gi|291334061|gb|ADD93734.1| 50S ribosomal protein L3 [uncultured marine bacterium MedDCM-OCT-S05-C114] Length = 215 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 84/217 (38%), Positives = 126/217 (58%), Gaps = 5/217 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA--GEAKV 58 M ++ +KLGM+ VY+ + +PVT++ C ++ ++LDK+GY A+Q+G Sbjct: 1 MNLELIGKKLGMSQVYDEDNNLVPVTIVEAGPCPILQVKSLDKDGYEAIQIGFNPKGKAP 60 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 +K G S NV P+ E R++ + GS + F+ ++VDV T GK Sbjct: 61 NKPNKCQIGKASKANVEPQHLSQEIRIKGEHSF-EQGSSLTVENFSDVKVVDVISTTKGK 119 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G +KR NFGG A+HG S+ HR GS G Q PGRVFKNKKM G G + T +NL+ Sbjct: 120 GFQGVVKRWNFGGGPASHG-SMFHRRGGSYGLCQWPGRVFKNKKMPGHTGTAKRTTQNLQ 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +V + ++ L+L+KG VPG+ K + + VR + KS V+ Sbjct: 179 LVKILPEKNLLLIKGSVPGS-KGTILTVRVAKKSKVS 214 >gi|223936428|ref|ZP_03628340.1| ribosomal protein L3 [bacterium Ellin514] gi|223894946|gb|EEF61395.1| ribosomal protein L3 [bacterium Ellin514] Length = 224 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 84/217 (38%), Positives = 123/217 (56%), Gaps = 6/217 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLG T VY+ +G PVTV+ +V+ +T D +GY AVQ+G + K + V+K Sbjct: 3 GLLGKKLGQTRVYDDKGVLWPVTVVLAGPNRVLQCKTQDSDGYNAVQLGFDDQKDQRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G N + K++ EFR + G V + F G +D G+T G+GF G Sbjct: 63 PLLGHIKKHNGAAVKRIREFRDFTLS--VKPGDVIGATIFAKGDFIDAIGVTKGRGFEGV 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF G THG HR G+ G R PG V + +M G MG + T +NLE++ V Sbjct: 121 MKRHNFAGGDMTHGAKGWHRRAGAIGQRLFPGTVMRGMRMPGHMGQVQRTTQNLEIIQVR 180 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220 + L+L+KG +PGA K ++++R+S K N KG V Sbjct: 181 EADNLLLIKGAIPGA-KGDYVVIRESKK---NPKGSV 213 >gi|210623188|ref|ZP_03293627.1| hypothetical protein CLOHIR_01577 [Clostridium hiranonis DSM 13275] gi|210153725|gb|EEA84731.1| hypothetical protein CLOHIR_01577 [Clostridium hiranonis DSM 13275] Length = 209 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 91/211 (43%), Positives = 134/211 (63%), Gaps = 4/211 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GMT ++ EG IPVTV+ + V +T++ +GY A+QVG +AK K+++ Sbjct: 2 KGILGKKVGMTQIFTEEGVVIPVTVVEVGPVVVTQVKTIENDGYNAIQVGFEDAKEKSLN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP +G ++ NV KK L EFRV+ + VG F G +DVTG++ GKGF G Sbjct: 62 KPAKGHLAAANV-LKKHLKEFRVENAAE-YTVGQEIKADIFEAGAKIDVTGISKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH THG S HR GS G PGRVFKNKK+AG MG +VT++NL++V V Sbjct: 120 PIKRHGQSRGPETHG-SRYHRRPGSMGACSYPGRVFKNKKLAGHMGSVKVTIQNLDLVRV 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D ++ L+LVKG +PGA K S + ++++ K++ Sbjct: 179 DAEKNLMLVKGAIPGA-KGSVVTIKEAVKAS 208 >gi|145606142|ref|XP_365809.2| hypothetical protein MGG_02511 [Magnaporthe oryzae 70-15] gi|145013870|gb|EDJ98511.1| hypothetical protein MGG_02511 [Magnaporthe oryzae 70-15] Length = 396 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 97/218 (44%), Positives = 132/218 (60%), Gaps = 2/218 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+GVVA K GMT +++ G RIP TVL LD+ QV++++T + GY AVQVGA + Sbjct: 105 VRAGVVAIKKGMTALFSRRGTRIPCTVLQLDSVQVLLNKTRENAGYFAVQVGAVPKRPST 164 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 P G+F + V PK+ + EFRV+ + LLPVG P +F VGQ VDV G + G GF Sbjct: 165 ALAPQLGYFEAKGVEPKQHVAEFRVRNEQGLLPVGVQLQPDWFHVGQWVDVRGTSRGMGF 224 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179 G MKRH F G +HG S++HR+ GS G Q G RV KKM GRMGG T +NL V Sbjct: 225 EGGMKRHGFSGQNKSHGNSLNHRTGGSVGPSQGSGSRVHPGKKMPGRMGGQSATAQNLSV 284 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 + VD+ G+++VKG V G K + ++D+ + Sbjct: 285 LKVDNDLGIVVVKGAVAGP-KGGMVKIQDAVLKPPPPE 321 >gi|126022788|ref|NP_043617.2| ribosomal protein L3 [Odontella sinensis] gi|125987859|sp|P49569|RK3_ODOSI RecName: Full=50S ribosomal protein L3, chloroplastic Length = 207 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 117/206 (56%), Gaps = 3/206 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT +++ G IPVT+L + C + +T +GY A+Q+G G K+ Sbjct: 1 MSLGLLGNKIGMTQIFDESGNIIPVTILKVGPCVITQVKTDLNDGYNAIQIGYGTVSNKS 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P G N+ P K L EFRV ++ VG V + + GQ +DVTG + GKGF Sbjct: 61 LTQPELGHLQKSNIQPLKYLKEFRVNNPEE-FKVGQVVNVESLSTGQFIDVTGKSSGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG KRHNF THG S +HR+ GS G PGRV KKMAG++G K L+++ Sbjct: 120 SGLQKRHNFTRGPMTHG-SKNHRAPGSIGMGTTPGRVLPGKKMAGQLGNKVTKTKKLKII 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 V+ +++VKG VPG N + + Sbjct: 179 QVNGNENILVVKGSVPGKPGN-LVTI 203 >gi|116515259|ref|YP_802888.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|122285345|sp|Q057A4|RL3_BUCCC RecName: Full=50S ribosomal protein L3 gi|58384692|gb|AAW72707.1| 50S ribosomal protein L3 [Buchnera aphidicola (Cinara cedri)] gi|116257113|gb|ABJ90795.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 208 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 85/209 (40%), Positives = 127/209 (60%), Gaps = 2/209 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +KLGMT ++ E IPVT + + + VV +T++ + Y ++Q+ G K K V Sbjct: 2 IGLVGKKLGMTRIFFEEYTSIPVTAIEILDNIVVQVKTIENDNYESIQLTTGFKKEKKVL 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F NVS + L+EF+ K+ G + ++F + +D+TG++ GKGF+G Sbjct: 62 KSEYGHFLKFNVSVGRGLWEFKC-KNSSNYSSGQKITINFFKNIKKLDITGISKGKGFAG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF ATHG S+SHR GS G Q PG VFK KKM+G +G R T++NL++V + Sbjct: 121 TVKRWNFRMQDATHGNSLSHRVPGSIGQNQTPGHVFKGKKMSGHLGDQRTTIQNLKIVKI 180 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 DD +IL+KG +PG+ S IL++ S K Sbjct: 181 DDINKIILIKGSIPGSI-GSDILLKPSIK 208 >gi|284042804|ref|YP_003393144.1| 50S ribosomal protein L3 [Conexibacter woesei DSM 14684] gi|283947025|gb|ADB49769.1| 50S ribosomal protein L3 [Conexibacter woesei DSM 14684] Length = 205 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 79/205 (38%), Positives = 108/205 (52%), Gaps = 3/205 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++A+KLGMT + +GR VTVL C V RT +++GY AVQ+ G + K ++K Sbjct: 4 ILAKKLGMTQRFLEDGRVERVTVLEAGPCPVTAIRTHERDGYEAVQLAFGACREKKLTKA 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G + S + L EFR + L VG + F GQ V V G + GKGF G + Sbjct: 64 ELGHLKKADASAHRHLVEFR--DEAGELQVGETVTVEAFEAGQTVKVAGTSKGKGFQGTI 121 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRHNF +HG R+ GS G P RV K + G+MG RVT K LE+V + Sbjct: 122 KRHNFRRGPKSHGSHNV-RAPGSIGASAWPARVMKGIRGPGQMGNKRVTQKGLEIVEIVS 180 Query: 185 KRGLILVKGCVPGAKKNSWILVRDS 209 K L+LV+G VPG K + + D+ Sbjct: 181 KDNLMLVRGSVPGPKGGTVEVRTDA 205 >gi|323456985|gb|EGB12851.1| hypothetical protein AURANDRAFT_19295 [Aureococcus anophagefferens] Length = 249 Score = 228 bits (583), Expect = 4e-58, Method: Composition-based stats. Identities = 105/223 (47%), Positives = 135/223 (60%), Gaps = 10/223 (4%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G +A K+GM ++ G+R +TVLH+D C+VV + +GY A+Q+GAG K K+ Sbjct: 2 RTGALAVKVGMLGTWDASGQRHALTVLHVDGCRVVQVKDAATDGYTALQLGAGALKPKHA 61 Query: 62 SKPMRGFFSSVNVSP--------KKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113 G + + L EFRV D +LP G+ ++F GQLVDV G Sbjct: 62 PSAHAGHCGAHGGEAVAGTPYELARTLAEFRVSAD-AVLPPGTRVPAAHFAPGQLVDVRG 120 Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 T GKGF GAMKR NFGG RATHGVS +HR+HGS G Q+PGRVFK KKMAGRMGG T Sbjct: 121 ATRGKGFQGAMKRWNFGGQRATHGVSKTHRAHGSMGGCQNPGRVFKGKKMAGRMGGRNRT 180 Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 +NL V +D R L+ V+GCVPGA K +W+ V D+ K Sbjct: 181 AQNLTVHKIDTVRDLLFVRGCVPGA-KGTWVRVTDAVKKVTPA 222 >gi|149072009|ref|YP_001293580.1| 50S ribosomal protein L3 [Rhodomonas salina] gi|212288242|sp|A6MW01|RK3_RHDSA RecName: Full=50S ribosomal protein L3, chloroplastic gi|134302960|gb|ABO70764.1| 50S ribosomal protein L3 [Rhodomonas salina] Length = 208 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 83/203 (40%), Positives = 119/203 (58%), Gaps = 2/203 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGMT +++ G IPVTV+ C + +T + + Y A+Q+G E K + Sbjct: 1 MIPGILGTKLGMTQIFDESGLAIPVTVIKAGPCILTQIKTQESDSYQAIQIGFSEVKESS 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP+ G K L E+RV K + L V + F VG+ V V+G TIGKGF Sbjct: 61 LNKPLLGHLKKSQAPALKHLKEYRV-KSVEGLEVAQKITLDSFEVGKTVSVSGKTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G ++R++F THG S +HR GS G PG+V K KKMAGR+GG + T+KNLE+V Sbjct: 120 AGTVRRYSFTRGPMTHG-SKNHREPGSIGQGSTPGKVHKGKKMAGRLGGKQSTIKNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSW 203 V+ +++VKG VPG K N Sbjct: 179 HVNTDNNILVVKGAVPGKKGNIL 201 >gi|188996239|ref|YP_001930490.1| ribosomal protein L3 [Sulfurihydrogenibium sp. YO3AOP1] gi|226730578|sp|B2V7L3|RL3_SULSY RecName: Full=50S ribosomal protein L3 gi|188931306|gb|ACD65936.1| ribosomal protein L3 [Sulfurihydrogenibium sp. YO3AOP1] Length = 226 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 89/210 (42%), Positives = 127/210 (60%), Gaps = 3/210 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ + G+ IPVTV+ C V RT +K+GY AV + GE K KN Sbjct: 1 MPKGIIGKKIGMTKVF-VNGKAIPVTVIQAGPCYVAYTRTQEKDGYNAVALTFGERKEKN 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + KP+ F N+ P K + EF ++ + + P + + F G LVD+TG + G+GF Sbjct: 60 IPKPLLAIFKKANIKPAKVIKEFPLKDGETVEPGQEIRIENVFEKGDLVDITGKSKGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 + MKR +F G +HG HR+ GS GCR +PGRV+K K+MAG G VTV LEVV Sbjct: 120 TSVMKRWDFAGFPKSHG-HRYHRAVGSIGCRTEPGRVWKTKRMAGHYGNETVTVLGLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 + ++ +ILVKG VPGA NS + ++ S Sbjct: 179 DIIPEKNVILVKGSVPGAP-NSTVFLKQSV 207 >gi|325000492|ref|ZP_08121604.1| ribosomal protein L3 [Pseudonocardia sp. P1] Length = 225 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 92/210 (43%), Positives = 123/210 (58%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 +GV+ KLGMT V++ R +PVTV+ + V R+ + +GY AVQ+ G + V+ Sbjct: 15 TGVLGTKLGMTQVFDDNNRVVPVTVVQVGPNVVTQVRSEESDGYTAVQLAYGAIDPRKVN 74 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V+P++ L E R D P G + F VDV G+T GKGF+G Sbjct: 75 KPETGHFAKAGVTPRRHLLELRTADAADYTP-GQEITAEAFAEIAEVDVVGVTKGKGFAG 133 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F GL A+HG HRS GS G PGRVFK +MAGRMG R T +NL+V V Sbjct: 134 VMKRHGFAGLGASHGTQRKHRSPGSIGGCATPGRVFKGVRMAGRMGSERQTTQNLKVHRV 193 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +RGL+L+KG VPGA + ++V+ K Sbjct: 194 DAERGLLLIKGAVPGA-RGGLVVVKTPAKG 222 >gi|288929340|ref|ZP_06423185.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 317 str. F0108] gi|288329442|gb|EFC68028.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 317 str. F0108] Length = 204 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 81/205 (39%), Positives = 118/205 (57%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V++ +G+ +P TV+ C V +T++ +GY AVQ+ GEAK +K Sbjct: 3 GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVETDGYKAVQLAYGEAKKNRTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 M G F +PKK L EF+ + +G + F + VDV G + GKGF G Sbjct: 63 AMAGIFEKAGTTPKKHLAEFKFDTE---YNLGDTITVDLFEGAEFVDVVGTSKGKGFQGV 119 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG + THG R GS G P +VFK +M G+MGG+RVT +NL+V+ V Sbjct: 120 VKRHGFGGVGQTTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLKVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + LILVKG V G ++ ++ + Sbjct: 180 IPEHNLILVKGSVAGCNGSTLLIKK 204 >gi|209528437|ref|ZP_03276868.1| ribosomal protein L3 [Arthrospira maxima CS-328] gi|209491125|gb|EDZ91549.1| ribosomal protein L3 [Arthrospira maxima CS-328] Length = 229 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 79/226 (34%), Positives = 122/226 (53%), Gaps = 20/226 (8%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT V++ G+ IPVTV+ C + +T +GY A+Q+G GE K Sbjct: 1 MSVGILGTKLGMTQVFDAETGKAIPVTVVQAGPCTITQVKTEATDGYTAIQLGYGEVPNK 60 Query: 60 ----------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103 +S +G + N + L E+R++ D+ +G F Sbjct: 61 TRKLNTRKSPDKEVNKYLSHAEQGHLTKSNSPLVRHLKEYRLESTDNF-ELGQEIKVDTF 119 Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 +GQ+VDVTG+++G+GF+G KR+NF HG S +HR GS G PGRV+ KKM Sbjct: 120 ELGQMVDVTGISMGRGFAGNQKRNNFRRGPMAHG-SKNHRLPGSIGPGTTPGRVYPGKKM 178 Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 AGR GG ++T + L +V +D +R L+L+KG +PG + ++ + Sbjct: 179 AGRYGGKQITTRKLTIVRIDLERNLLLIKGSIPGKP-GGLLNIKPA 223 >gi|239905858|ref|YP_002952597.1| 50S ribosomal protein L3 [Desulfovibrio magneticus RS-1] gi|259647413|sp|C4XLX3|RL3_DESMR RecName: Full=50S ribosomal protein L3 gi|239795722|dbj|BAH74711.1| 50S ribosomal protein L3 [Desulfovibrio magneticus RS-1] Length = 210 Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 88/204 (43%), Positives = 119/204 (58%), Gaps = 2/204 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RKLGMT V+ +G IPVTV+ C V + L+K+GY A+Q+G E + V+K Sbjct: 6 GILGRKLGMTRVFGDDGSIIPVTVIQAGPCPVTQVKNLEKDGYNAMQIGFDEIPERKVNK 65 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P +G + L E R+ G + F G++V VTG +IGKGF+G Sbjct: 66 PEKGHLDKAARGYFRVLKEIRLDGPV-PFEQGMDVTVDIFAPGEIVKVTGTSIGKGFAGV 124 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR NF GL+ THG +HRS GS G +PG+V K KKMAG MG VTV ++ VV V Sbjct: 125 MKRWNFAGLKKTHGTEKAHRSGGSIGNNTEPGKVMKGKKMAGHMGARTVTVPSITVVDVR 184 Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207 + LILVKG +PG +N ++VR Sbjct: 185 PEMNLILVKGQIPGP-RNGVVVVR 207 >gi|254431244|ref|ZP_05044947.1| ribosomal protein L3 [Cyanobium sp. PCC 7001] gi|197625697|gb|EDY38256.1| ribosomal protein L3 [Cyanobium sp. PCC 7001] Length = 204 Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 78/205 (38%), Positives = 118/205 (57%), Gaps = 3/205 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 M+ ++ G+ IPVTV+ C++ ++ +GY AVQ+G G+ + K V+KP +G + Sbjct: 1 MSQFFDEAGKSIPVTVIEAGPCRITQIKSTGTDGYNAVQLGFGDIREKLVNKPAQGHLAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 + L E+RV D L +G + + F GQ VDV+G T+G+GF+G KRH F Sbjct: 61 SGEELLRHLKEYRVDSLDG-LELGGAVTVAAFEPGQKVDVSGDTMGRGFAGYQKRHGFSR 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 THG S +HR GSTG PGRV+ K+MAGR GG + T + L ++ VD +R L++V Sbjct: 120 GPMTHG-SKNHREPGSTGAGTTPGRVYPGKRMAGRYGGKQTTTRGLVILKVDTERNLLVV 178 Query: 192 KGCVPGAKKNSWILVRDSFKSAVNC 216 KG VPG + + +R + + N Sbjct: 179 KGSVPGKP-GALLNIRPANRVGANA 202 >gi|282881000|ref|ZP_06289691.1| 50S ribosomal protein L3 [Prevotella timonensis CRIS 5C-B1] gi|281305223|gb|EFA97292.1| 50S ribosomal protein L3 [Prevotella timonensis CRIS 5C-B1] Length = 204 Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats. Identities = 83/205 (40%), Positives = 125/205 (60%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V++ +G+ IP TV+ C V +T++K+GY AVQ+G GEAK K SK Sbjct: 3 GLIGRKIGMTSVFSADGKNIPCTVIEAGPCVVTQLKTVEKDGYKAVQLGFGEAKEKRTSK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F +PKK L EF+ +++ +G + F+ VDV G++ GKGF G Sbjct: 63 PLMGTFKKAGTTPKKHLAEFKFEEE---YNLGDTITVDLFSNADFVDVVGVSKGKGFQGV 119 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG ++THG R GS G P +VFK +M G+MGG+RVT +NL V+ V Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLRVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 ++ L++VKG G ++ ++ + Sbjct: 180 IPEQNLLIVKGSFAGFNGSTVLIEK 204 >gi|168282378|ref|ZP_02690045.1| ribosomal protein L3 [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|182675690|gb|EDT87595.1| ribosomal protein L3 [Ureaplasma parvum serovar 14 str. ATCC 33697] Length = 233 Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats. Identities = 78/210 (37%), Positives = 115/210 (54%), Gaps = 8/210 (3%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ K+GMT V+ G+ + TV++++ +V+ +T +K+GY A+Q+G K K ++KP Sbjct: 4 LLGTKVGMTQVFTETGKAVAATVIYVEPNKVLAVKTNEKDGYSAIQIGYETVKEKALNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + G F N PK+ + EFR D + VG+ + S F GQLV+ T G GF+G++ Sbjct: 64 LLGQFKKANSDPKRHIKEFR----DAVAEVGAELTVSEFEPGQLVNAQAYTKGHGFTGSI 119 Query: 125 KRHNFGGLRATHGVSISHRSHGSTG---CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 KRHNF HG HR GS RVFK K+ G G VT KNL V+ Sbjct: 120 KRHNFSMGPMGHGAGYPHRYVGSIAKGRGGSQAQRVFKGTKLPGHYGHELVTTKNLLVLD 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V LIL+KG +PG K S +L++ + K Sbjct: 180 VKANENLILIKGAIPGP-KGSIVLLKSAKK 208 >gi|291567784|dbj|BAI90056.1| 50S ribosomal protein L3 [Arthrospira platensis NIES-39] Length = 229 Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats. Identities = 81/226 (35%), Positives = 122/226 (53%), Gaps = 20/226 (8%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT V++ G+ IPVTV+ C + +T +GY A+Q+G GE K Sbjct: 1 MSVGILGTKLGMTQVFDTETGKAIPVTVVQAGPCTITQVKTEATDGYTAIQLGYGEVPNK 60 Query: 60 ----------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103 +S +G + N + L E+R++ D+ +G F Sbjct: 61 TRKLNTRKSPDKEVNKYLSHAEQGHLTKSNSPLVRHLKEYRLESTDNF-ELGQEVKVDAF 119 Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 GQ+VDVTG+++G+GF+G KR+NF HG S +HR GS G PGRV+ KKM Sbjct: 120 EPGQIVDVTGISMGRGFAGNQKRNNFRRGPMAHG-SKNHRLPGSIGPGTTPGRVYPGKKM 178 Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 AGR GG ++T + L +V VD +R L+L+KG +PG K + ++ + Sbjct: 179 AGRYGGKQITTRKLTIVRVDLERNLLLIKGSIPG-KTGGLLNIKPA 223 >gi|168308532|ref|ZP_02691207.1| ribosomal protein L3 [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|171902869|gb|EDT49158.1| ribosomal protein L3 [Ureaplasma parvum serovar 1 str. ATCC 27813] Length = 233 Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats. Identities = 78/210 (37%), Positives = 114/210 (54%), Gaps = 8/210 (3%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ K+GMT V+ G+ + TV++++ +V+ +T +K+GY A+Q+G K K ++KP Sbjct: 4 LLGTKVGMTQVFTETGKAVAATVIYVEPNKVLAVKTNEKDGYSAIQIGYETVKEKALNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + G F N PK+ + EFR D VG+ + S F GQLV+ T G GF+G++ Sbjct: 64 LLGQFKKANSDPKRHIKEFR----DVFAEVGAELTVSEFEPGQLVNAQAYTKGHGFTGSI 119 Query: 125 KRHNFGGLRATHGVSISHRSHGSTG---CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 KRHNF HG HR GS RVFK K+ G G VT KNL V+ Sbjct: 120 KRHNFSMGPMGHGAGYPHRYVGSIAKGRGGSQAQRVFKGTKLPGHYGHELVTTKNLLVLD 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V LIL+KG +PG K S +L++ + K Sbjct: 180 VKANENLILIKGAIPGP-KGSIVLLKSAKK 208 >gi|303328094|ref|ZP_07358533.1| 50S ribosomal protein L3 [Desulfovibrio sp. 3_1_syn3] gi|302861920|gb|EFL84855.1| 50S ribosomal protein L3 [Desulfovibrio sp. 3_1_syn3] Length = 209 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 83/206 (40%), Positives = 117/206 (56%), Gaps = 2/206 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 + G++ RKLGMT ++ +G + VTV+ C V +T++K+GY A+Q+ EAK K+V Sbjct: 4 KMGILGRKLGMTRIFAGDGAAVAVTVIEAGPCPVTQVKTVEKDGYNALQIALTEAKEKHV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 K MRG F+ + E R+ + P G + F G +V VTG ++GKG+ Sbjct: 64 GKAMRGHFAKAGTGLFRHTREIRLSGAPEQQP-GQQLTVDIFAAGDVVKVTGKSMGKGYQ 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G M+R NF G + THG HR++GS G PG VFK +KMAG G VT L +V Sbjct: 123 GRMRRWNFAGSKDTHGCEKVHRNNGSVGNNTFPGHVFKGRKMAGHWGNETVTEMGLLIVG 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V + +ILVKG VPG KN +L+R Sbjct: 183 VRPEDNVILVKGSVPGP-KNGLVLIR 207 >gi|133117|sp|P18665|RM03_RAT RecName: Full=39S ribosomal protein L3, mitochondrial; Short=L3mt; Short=MRP-L3 Length = 347 Score = 227 bits (579), Expect = 9e-58, Method: Composition-based stats. Identities = 74/221 (33%), Positives = 113/221 (51%), Gaps = 8/221 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVKN 60 R G++A KLGM ++ +G++ VT+L + +C V+ + + NG A + G Sbjct: 96 RVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKTAT-LTVGGKTGSR 154 Query: 61 VSKP--MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 + K + F+ + + PK+ F V D+ ++ G+ ++F GQ VDVT TIGK Sbjct: 155 LYKANSILEFYRDLGLPPKQTTKIFHVT-DNAVIKQGTPLYAAHFRPGQYVDVTAKTIGK 213 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G MKR F G A+HG + +HR G+ D RV+ KM G+MG TV L+ Sbjct: 214 GFQGVMKRWGFKGQPASHGQTKTHRRPGAI-STGDIARVWPGTKMPGKMGNQNRTVYGLK 272 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 V V+ K +I V G V +N + ++DS A GK Sbjct: 273 VWRVNTKHNIIYVNGSV--GHRNCLVKIKDSTLPAYKDLGK 311 >gi|81859531|sp|Q5HDV8|RL3_STAAC RecName: Full=50S ribosomal protein L3 gi|57285020|gb|AAW37114.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus COL] gi|323442744|gb|EGB00370.1| 50S ribosomal protein L3 [Staphylococcus aureus O46] Length = 209 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 89/210 (42%), Positives = 115/210 (54%), Gaps = 11/210 (5%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA--------GEAKVKNVSK 63 MT V+ G IPVTV+ V+ +T++ +GY A+QVG K +K Sbjct: 1 MTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYKKDAKSNKYANK 60 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G + +PK+ + EFR D D VG S F G ++DVTG++ GKGF GA Sbjct: 61 PAEGHAKKADAAPKRFIREFR-NVDVDAYEVGQEVSVDTFVAGDVIDVTGVSKGKGFQGA 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KRH +HG HR+ GS G D RVFK +KM GRMGGN VTV+NLEVV VD Sbjct: 120 IKRHGQSRGPMSHGSH-FHRAPGSVGMASDASRVFKGQKMPGRMGGNTVTVQNLEVVQVD 178 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + +ILVKG VPG KK + +R S K Sbjct: 179 TENKVILVKGNVPGPKKG-LVEIRTSIKKG 207 >gi|294674771|ref|YP_003575387.1| 50S ribosomal protein L3 [Prevotella ruminicola 23] gi|294472870|gb|ADE82259.1| ribosomal protein L3 [Prevotella ruminicola 23] Length = 204 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 83/205 (40%), Positives = 121/205 (59%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V++ +G+ +P TV+ C V ++++K+GY AVQ+ GE K KN +K Sbjct: 3 GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKSVEKDGYEAVQLAFGEKKEKNTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 M G F N +PK L EF+ + L +G + F + VDV G + GKGF G Sbjct: 63 AMMGIFKKANTTPKAHLAEFKFDTE---LNLGDTVTVDIFEGAEFVDVVGTSKGKGFQGV 119 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG +ATHG R GS G P +VFK +M G+MGG+RVT +NL+V+ V Sbjct: 120 VKRHGFGGVGQATHGQDDRLRKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLKVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + LILVKG G ++ ++ + Sbjct: 180 IPEHNLILVKGSCAGYNGSTVLINK 204 >gi|254442313|ref|ZP_05055789.1| ribosomal protein L3 [Verrucomicrobiae bacterium DG1235] gi|198256621|gb|EDY80929.1| ribosomal protein L3 [Verrucomicrobiae bacterium DG1235] Length = 201 Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 84/201 (41%), Positives = 116/201 (57%), Gaps = 2/201 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT VY + + +PVTVL C V+ +T++ +GY A+Q+G K KN SK G Sbjct: 1 MTQVYGSDNQVVPVTVLQAGPCPVLQVKTVESDGYNAIQIGFDSKKDKNASKAAIGHAKK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 V+ ++ + G V S F VG+ VDV G T GKGF+G MKR N G Sbjct: 61 AGVAHAPRVIREVRSPEAIDATAGDVLDVSKFEVGKKVDVIGNTKGKGFAGVMKRFNTKG 120 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 A+HG S+ HR GS G Q PG VFKN+KM G MG + T++NLE+VS+D ++ LILV Sbjct: 121 GPASHG-SMFHRRIGSIGLCQWPGHVFKNQKMPGHMGAKQRTIQNLEIVSIDAEKNLILV 179 Query: 192 KGCVPGAKKNSWILVRDSFKS 212 KG +PGA +++R + K+ Sbjct: 180 KGGIPGAN-GDTVMIRSAIKA 199 >gi|281422251|ref|ZP_06253250.1| 50S ribosomal protein L3 [Prevotella copri DSM 18205] gi|281403756|gb|EFB34436.1| 50S ribosomal protein L3 [Prevotella copri DSM 18205] Length = 204 Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 82/204 (40%), Positives = 123/204 (60%), Gaps = 5/204 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +G+ IP TV+ + C V +T++K+GY A Q+G EAK K S+ Sbjct: 3 GLIGKKIGMTSVFSADGKNIPCTVIEVGPCVVTQVKTVEKDGYKAYQLGFEEAKEKRTSQ 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 PM G F +PKK L EF+ ++ +G + F + VDV G + GKGF G Sbjct: 63 PMMGIFKKAGTTPKKHLAEFKFDEE---YNLGDTITVEIFNDCKFVDVIGTSKGKGFQGV 119 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG ++THG R GS G P +VFK +M G+MGG+RVT +NL+V+ + Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKI 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 ++ L++VKG G K S +L+ Sbjct: 180 IPEQNLLIVKGSFAGC-KGSTVLI 202 >gi|88704378|ref|ZP_01102092.1| Ribosomal protein L3 [Congregibacter litoralis KT71] gi|88701429|gb|EAQ98534.1| Ribosomal protein L3 [Congregibacter litoralis KT71] Length = 184 Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 81/184 (44%), Positives = 109/184 (59%), Gaps = 1/184 (0%) Query: 29 HLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKD 88 + +V + D +GY ++QV AG K VSK G F+ V + L+EFR+ + Sbjct: 2 EVSPNRVTQIKENDSDGYRSIQVTAGSRKAAKVSKSEAGLFAKAGVEAGRGLWEFRLSAE 61 Query: 89 DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148 ++ VG+ + F GQ VDV G + GKGF G +KR NF ATHG S+SHR+ GS Sbjct: 62 EEGFEVGAELTVERFEEGQKVDVAGKSKGKGFQGVIKRWNFSMQDATHGNSLSHRAPGSI 121 Query: 149 GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRD 208 G Q PGRVFK KKM+G+MG VTV+ LE+V VD +R L+L+KG VPGA + VR Sbjct: 122 GQCQTPGRVFKGKKMSGQMGNTNVTVQGLEIVRVDAERNLLLIKGAVPGAPGGDVV-VRP 180 Query: 209 SFKS 212 + K Sbjct: 181 AVKG 184 >gi|282878759|ref|ZP_06287527.1| 50S ribosomal protein L3 [Prevotella buccalis ATCC 35310] gi|281299150|gb|EFA91551.1| 50S ribosomal protein L3 [Prevotella buccalis ATCC 35310] Length = 204 Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 79/205 (38%), Positives = 119/205 (58%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V++ +G+ IP TV+ C V +T + +GY A+Q+G GEAK K +K Sbjct: 3 GLIGRKIGMTSVFSADGKNIPCTVIEAGPCVVTQVKTEETDGYKALQLGFGEAKEKRTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F +PKK L EF+ + +G + F + VDV G + GKGF G Sbjct: 63 PLLGTFKKAGTTPKKHLVEFKFDGE---YNLGDTITVELFNDTEFVDVIGTSKGKGFQGV 119 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG + THG R G+ G P +VFK +M G+MGG+RVT +NL V+ V Sbjct: 120 VKRHGFGGVGQRTHGQDDRARKPGAIGACSYPAKVFKGMRMGGQMGGDRVTTQNLRVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 ++ L++VKG G ++ ++ + Sbjct: 180 IPEKNLLIVKGSFAGCNGSTVLIEK 204 >gi|330752348|emb|CBL87301.1| ribosomal protein L3 [uncultured Sphingobacteria bacterium] Length = 205 Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 76/203 (37%), Positives = 118/203 (58%), Gaps = 4/203 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 V+ +K+GMT ++ + G++ P TV+ + + ++ + +GY +VQ+ + E K K+ +KP Sbjct: 4 VIGKKIGMTAIFTVNGKKEPCTVVSCEPNVITQIKSEESDGYSSVQIASIEKKEKSSNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G F+ +PK+ + E R + VG F F GQ VDV G + GKGF G + Sbjct: 64 EMGHFAKAKTTPKRVVMEIRDYTGEG--TVGDSFGVEIFEEGQFVDVVGTSKGKGFQGVV 121 Query: 125 KRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 KRH F G ATHG R+ GS G P RVFK +MAGRMGG RV ++NL ++ VD Sbjct: 122 KRHGFRGVGEATHGQHNRLRAPGSLGAGSTPSRVFKGTRMAGRMGGERVKMQNLRILKVD 181 Query: 184 DKRGLILVKGCVPGAKKNSWILV 206 + ++++ G VPG K S++++ Sbjct: 182 TENNVLVISGAVPG-HKGSYVII 203 >gi|281212110|gb|EFA86271.1| ribosomal protein L3 [Polysphondylium pallidum PN500] Length = 338 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 107/208 (51%), Positives = 141/208 (67%), Gaps = 3/208 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G + +K+GMT V+ ++ IPVTV+HL N QVV + +G A+QVGA E ++KNV Sbjct: 59 RVGAIGKKVGMTTVW-VDHVAIPVTVVHLPNNQVVQVKHKVNDGVDALQVGADEIRLKNV 117 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 M+G F+ +V PK+ L EF V ++ LPVG+ +P +F GQLV + G++ GKGF Sbjct: 118 KGTMKGHFAKADVPPKRILMEFPVTRN-AFLPVGTQITPRHFVPGQLVTIKGVSTGKGFQ 176 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR NF GL ATHGVS+SHRS GSTGCRQ PGRVFK KKM G +G TV NL+V+ Sbjct: 177 GGMKRWNFSGLAATHGVSVSHRSIGSTGCRQTPGRVFKGKKMPGHLGSESTTVLNLQVIQ 236 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209 + + G I++KG VPG KK S+I + DS Sbjct: 237 CNTELGTIMLKGAVPG-KKGSYIRIIDS 263 >gi|85057802|ref|YP_456718.1| 50S ribosomal protein L3P [Aster yellows witches'-broom phytoplasma AYWB] gi|109893411|sp|Q2NIV4|RL3_AYWBP RecName: Full=50S ribosomal protein L3 gi|84789907|gb|ABC65639.1| LSU ribosomal protein L3P [Aster yellows witches'-broom phytoplasma AYWB] Length = 221 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 80/216 (37%), Positives = 125/216 (57%), Gaps = 9/216 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+N +G +PVT++ + V+ + +D++GY A Q+G + + KN Sbjct: 1 MAQGILGKKIGMTQVFNEQGELVPVTIVDVAANVVLQQKNVDQDGYQATQIGFCDKREKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL----LPVGSVFSPSYFTVGQLVDVTGMTI 116 SKPM G F +PK+ + E D + L VG++ + F VG LVDVTG + Sbjct: 61 TSKPMLGHFKKATTAPKRFIKEINFSSDVNSNLANLVVGALITNDLFQVGDLVDVTGTSK 120 Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 GKGF+G++KRHN +HG S HR GS K KK+ G MG VT++N Sbjct: 121 GKGFAGSIKRHNQSRGPESHG-SRYHRRPGSM---GPIKGKLKGKKLPGHMGYETVTIQN 176 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 L ++S+D ++ L L+KG VPG K +++++ + K Sbjct: 177 LAILSIDTEKNLFLIKGNVPGPNKG-FVMIKSAVKK 211 >gi|26454475|dbj|BAC44803.1| ribosomal protein L3 [Mycoplasma penetrans HF-2] Length = 326 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 116/211 (54%), Gaps = 7/211 (3%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RK+GM + +GRRIPVT++ + V+ ++T +KNGY+A +VG + + K ++KP Sbjct: 20 ILGRKIGMIQSFLEDGRRIPVTIIQAEPNVVLENKTQEKNGYVATKVGFQQIEEKKLNKP 79 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +G+F + K EFR + VG F G VD +T GKGF+GA+ Sbjct: 80 QKGYFKKIKTDAFKHTKEFR---NVSGYNVGDKILVDIFNSGDKVDAQAITKGKGFTGAI 136 Query: 125 KRHNFGGLRATHGVSISHRSHGSTG---CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 KR NF HG HR GS RV K +KM+G G VT+ NL VVS Sbjct: 137 KRWNFKVGPLGHGAGYPHRYQGSISFGRGGSQGQRVPKGQKMSGHYGHELVTISNLTVVS 196 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 ++ ++ LILVKG VPG NS +L++ + KS Sbjct: 197 IELEKNLILVKGSVPGPV-NSLVLLKTTVKS 226 >gi|284052648|ref|ZP_06382858.1| 50S ribosomal protein L3 [Arthrospira platensis str. Paraca] Length = 229 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 81/226 (35%), Positives = 122/226 (53%), Gaps = 20/226 (8%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ KLGMT V++ G+ IPVTV+ C + +T +GY A+Q+G GE K Sbjct: 1 MSVGILGTKLGMTQVFDTETGKAIPVTVVQAGPCTITQVKTEATDGYTAIQLGYGEVPNK 60 Query: 60 ----------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103 +S +G + N + L E+R++ D+ +G F Sbjct: 61 TRKLNTRKSPDKEVNKYLSHAEQGHLTKSNSPLVRHLKEYRLESTDNF-ELGQQVKVDAF 119 Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 GQ+VDVTG+++G+GF+G KR+NF HG S +HR GS G PGRV+ KKM Sbjct: 120 EPGQIVDVTGISMGRGFAGNQKRNNFRRGPMAHG-SKNHRLPGSIGPGTTPGRVYPGKKM 178 Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 AGR GG ++T + L +V VD +R L+L+KG +PG K + ++ + Sbjct: 179 AGRYGGKQITTRKLTIVRVDLERNLLLIKGSIPG-KTGGLLNIKPA 223 >gi|323440070|gb|EGA97785.1| 50S ribosomal protein L3 [Staphylococcus aureus O11] Length = 209 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 88/210 (41%), Positives = 114/210 (54%), Gaps = 11/210 (5%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA--------GEAKVKNVSK 63 MT V+ G IPVTV+ V+ +T++ +GY A+QVG K +K Sbjct: 1 MTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYKKDAKSNKYANK 60 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G + +PK+ + EFR D D VG S F G ++DVTG++ GKGF GA Sbjct: 61 PAEGHAKKADAAPKRFIREFR-NVDVDAYEVGQEVSVDTFVAGDVIDVTGVSKGKGFQGA 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KRH +HG HR+ GS G D RVFK +KM GRMG N VTV+NLEVV VD Sbjct: 120 IKRHGQSRGPMSHGSH-FHRAPGSVGMASDASRVFKGQKMPGRMGRNTVTVQNLEVVQVD 178 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + +ILVKG VPG KK + +R S K Sbjct: 179 TENKVILVKGNVPGPKKG-LVEIRTSIKKG 207 >gi|254456207|ref|ZP_05069636.1| ribosomal protein L3 [Candidatus Pelagibacter sp. HTCC7211] gi|207083209|gb|EDZ60635.1| ribosomal protein L3 [Candidatus Pelagibacter sp. HTCC7211] Length = 236 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 100/210 (47%), Positives = 138/210 (65%), Gaps = 2/210 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 ++ +K+GMT + G+ +PVTVL ++ +VV +K GY AVQ+G G+ K ++ Sbjct: 4 IALMGKKIGMTREFYKTGQLVPVTVLKVEKARVVQVIDEEKRGYKAVQLGYGKIKNSKLT 63 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K M+GFF+ N K+KL E+R+ KD + G+ F F + VD TIGKGF+G Sbjct: 64 KAMKGFFAKKNTEAKRKLKEYRI-KDTEAYKEGNEFGLEIFKDIKFVDTRSKTIGKGFAG 122 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKR NFGGLRA+HGVSISHR+HGSTG QDPG+VFK KKMAG MG T+ N+E+V Sbjct: 123 AMKRWNFGGLRASHGVSISHRAHGSTGHSQDPGKVFKGKKMAGHMGDRLRTMLNIEIVKT 182 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D + L+ +KG +PG+ KN+ + VR S K+ Sbjct: 183 DLENELLYLKGSIPGS-KNTEVFVRKSVKN 211 >gi|194383748|dbj|BAG59232.1| unnamed protein product [Homo sapiens] Length = 375 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 77/221 (34%), Positives = 116/221 (52%), Gaps = 5/221 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKV 58 R G++A KLGM ++ +G++ VT+L + +C V+ + + + NG MA + VG Sbjct: 122 FRVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSR 181 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 + + F+ + + PK+ + F + + + P G+ ++F GQ VDVT TIGK Sbjct: 182 FRKATSILEFYRELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGK 240 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G MKR F G ATHG + +HR G+ D GRV+ KM G+ G T L+ Sbjct: 241 GFQGVMKRWGFKGQPATHGQTKTHRRPGAV-ATGDIGRVWPGTKMPGKTGNIYRTEYGLK 299 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 V ++ K +I V G VPG KN + V+DS A GK Sbjct: 300 VWRINTKHNIIYVNGSVPG-HKNCLVKVKDSKLPAYKDLGK 339 >gi|149247048|ref|XP_001527949.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146447903|gb|EDK42291.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 278 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 91/210 (43%), Positives = 126/210 (60%), Gaps = 1/210 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+ K GM + +G + TV+ +D+C+V+ +T D++GY A +G + Sbjct: 59 RPGLFGIKRGMITWFTPKGEQFAATVIEIDSCEVIGQKTRDQHGYDANIIGTIDKLKNYP 118 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 + F VSPK K EFRV ++L+PVG+ YF+VGQ+VD+ G+T GKGF+ Sbjct: 119 REAELKMFEEAGVSPKHKFGEFRVLDTNNLIPVGTELKADYFSVGQMVDIKGITKGKGFA 178 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR NF G ATHGVS +HR+ GS G Q+PGRV KKM GRMG + T N EV+ Sbjct: 179 GVMKRWNFAGNNATHGVSKAHRTPGSMGGNQNPGRVLPGKKMPGRMGCDNRTEFNKEVLH 238 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 VD GL++VKG +PG K S + + D+ K Sbjct: 239 VDGDAGLLIVKGNIPGPNK-SIVRISDALK 267 >gi|225873078|ref|YP_002754537.1| ribosomal protein L3 [Acidobacterium capsulatum ATCC 51196] gi|225791691|gb|ACO31781.1| ribosomal protein L3 [Acidobacterium capsulatum ATCC 51196] Length = 246 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 74/225 (32%), Positives = 122/225 (54%), Gaps = 12/225 (5%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVKNV 61 +G++ +K+GMT V++ +G P+TVL C + +T K+GY A Q+G E K V Sbjct: 4 TGILGKKIGMTQVFDEKGEVHPITVLQAGPCVITQLKTAAKDGYDAAQIGLVEFVKDSKV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQ--------KDDDLLPVGSVFSPSYFTVGQLVDVTG 113 +KPM+G F+ +V+P + + E V+ + + + G F + VD+ G Sbjct: 64 TKPMKGHFAKSDVAPVRMIKEVDVETAAPSAEGESNGAVKAGDRVLVDIFADEKYVDIIG 123 Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 + G+GF+G ++RH FGG +HG + GS G P RVF ++M G MG +RVT Sbjct: 124 TSKGRGFAGVVRRHGFGGGPKSHGHMF--QVQGSIGASSFPSRVFPGQRMPGHMGTDRVT 181 Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 V+NL + +D LI+V+G VPG ++ ++L+ + +G Sbjct: 182 VRNLRIRGIDLDENLIMVEGAVPGP-RDGYVLISKAKAPPRERRG 225 >gi|269115073|ref|YP_003302836.1| 50S ribosomal protein L3 [Mycoplasma hominis] gi|268322698|emb|CAX37433.1| 50S ribosomal protein L3 [Mycoplasma hominis ATCC 23114] Length = 268 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 79/215 (36%), Positives = 121/215 (56%), Gaps = 6/215 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT ++ EG+ IPVTV+ + V T +KNGY+A+Q+ + K + Sbjct: 2 KGILGRKVGMTQLFTSEGKLIPVTVVEVKPNVVTKVLTSEKNGYVALQLATEDKKSSRII 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP +F N +PK+ + E R D +G S FT G++VDVT ++ GKGF+G Sbjct: 62 KPEVNYFKQANTTPKRFVKEIR---DMSGFSLGDTVDASLFTAGEVVDVTAISKGKGFAG 118 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180 +KR N +HG + TG D RV+K M G +G +VTV+NLEVV Sbjct: 119 TIKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVWKGMTMPGHLGAEQVTVQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 D + ++L+KG VPGA K ++++++ + KS N Sbjct: 179 KEDAENNILLIKGSVPGA-KGAFLIIKTAKKSIKN 212 >gi|311268535|ref|XP_001925073.2| PREDICTED: 39S ribosomal protein L3, mitochondrial [Sus scrofa] Length = 399 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 72/216 (33%), Positives = 114/216 (52%), Gaps = 5/216 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGY--MAVQVGAGEAKVK 59 R G++A KLGM ++ +G++ VT+L + +C V+ + + + A+ VG Sbjct: 147 RVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTPKENHNGRMAALTVGGKTVSHF 206 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + S + F+ + + PK+K+ F V ++ + P G+ ++F GQ VDVT TIGKG Sbjct: 207 HKSASILEFYQELGLPPKQKVKIFNVTENAVIKP-GTPLYAAHFRPGQYVDVTAKTIGKG 265 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G M+R F G ATHG + +HR G+ D RV+ KM G++G T L+V Sbjct: 266 FQGVMRRWGFKGQPATHGQTKTHRRPGAI-STGDVARVWPGTKMPGQLGNIDRTAFGLKV 324 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++ K +I V G VPG KN + ++DS A Sbjct: 325 WRINTKHNIIYVNGSVPG-HKNCLVKIKDSKLPAYK 359 >gi|13357791|ref|NP_078065.1| 50S ribosomal protein L3 [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|167972002|ref|ZP_02554279.1| ribosomal protein L3 [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|170762111|ref|YP_001752314.1| 50S ribosomal protein L3 [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|42559705|sp|Q9PQR0|RL3_UREPA RecName: Full=50S ribosomal protein L3 gi|189029487|sp|B1AIM0|RL3_UREP2 RecName: Full=50S ribosomal protein L3 gi|11276669|pir||H82914 ribosomal protein L3 UU231 [imported] - Ureaplasma urealyticum gi|6899201|gb|AAF30640.1|AE002122_9 ribosomal protein L3 [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827688|gb|ACA32950.1| ribosomal protein L3 [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|186700755|gb|EDU19037.1| ribosomal protein L3 [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 233 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 78/210 (37%), Positives = 115/210 (54%), Gaps = 8/210 (3%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ K+GMT V+ G+ + TV++++ +V+ +T +K+GY A+Q+G K K ++KP Sbjct: 4 LLGTKVGMTQVFTETGKAVAATVIYVEPNKVLAVKTNEKDGYSAIQIGYETVKEKALNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + G F N PK+ + EFR D + VG+ + S F GQLV+ T G GF+G++ Sbjct: 64 LLGQFKKANSDPKRHIKEFR----DVVAEVGAELTVSEFEPGQLVNAQAYTKGHGFTGSI 119 Query: 125 KRHNFGGLRATHGVSISHRSHGSTG---CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 KRHNF HG HR GS RVFK K+ G G VT KNL V+ Sbjct: 120 KRHNFSMGPMGHGAGYPHRYVGSIAKGRGGSQAQRVFKGTKLPGHYGHELVTTKNLLVLD 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V LIL+KG +PG K S +L++ + K Sbjct: 180 VKANENLILIKGAIPGP-KGSIVLLKSAKK 208 >gi|91786167|ref|YP_547119.1| 50S ribosomal protein L3 [Polaromonas sp. JS666] gi|123165529|sp|Q12GX1|RL3_POLSJ RecName: Full=50S ribosomal protein L3 gi|91695392|gb|ABE42221.1| LSU ribosomal protein L3P [Polaromonas sp. JS666] Length = 227 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 89/220 (40%), Positives = 128/220 (58%), Gaps = 3/220 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G +PVTV+ + N +V +T +GY A+QV G K V+K Sbjct: 8 GLLGRKVGMMRLFTDDGDTVPVTVVDVSNNRVTQVKTEANDGYDALQVAFGARKASRVTK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVF-SPSYFTVGQLVDVTGMTIGKGFS 121 P G + V + L EFRV D G+V + F VGQLVDV G +IGKG++ Sbjct: 68 PAAGHLAKAGVEAGEILKEFRVTADVAGKYAAGTVVPAADVFAVGQLVDVQGTSIGKGYA 127 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHN RA+HG S SH GS G QDPGRVF K+M G +G VT +NL +V Sbjct: 128 GTIKRHNMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTVTTQNLNIVR 187 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 +D+ R L++++G VPG+ K ++ VR + K+ K + Sbjct: 188 IDEARQLLMIRGAVPGS-KGGFVTVRAAIKAKPTTAAKGA 226 >gi|283768462|ref|ZP_06341374.1| 50S ribosomal protein L3 [Bulleidia extructa W1219] gi|283104854|gb|EFC06226.1| 50S ribosomal protein L3 [Bulleidia extructa W1219] Length = 252 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 116/211 (54%), Gaps = 4/211 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RKLGMT V+ I+G IPVTV+ + V+ +T + +GY AVQ+G + K + + Sbjct: 2 KGILGRKLGMTQVFTIDGTLIPVTVIDVKPNVVLQKKTKETDGYEAVQLGYEDVKEQRSN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G N +PKK + E R + + VG+ F G +VDV G + GKG+SG Sbjct: 62 KPAIGHAKKANTAPKKYIKEIRADEMMN-FEVGAEVKADLFKAGDVVDVQGTSKGKGYSG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 + R+N +HG S HR GS + G V K M G+ GG T +NL+V+ Sbjct: 121 TIVRNNAARGPMSHG-SGHHRHIGSLATNGRNNGVVNKGTAMPGQEGGYTTTNQNLQVIK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + G ILVKG +PG +K ++++ + K Sbjct: 180 VDAEEGYILVKGNIPGPRKG-LVVIKTTVKP 209 >gi|313677120|ref|YP_004055116.1| LSU ribosomal protein l3p [Marivirga tractuosa DSM 4126] gi|312943818|gb|ADR23008.1| LSU ribosomal protein L3P [Marivirga tractuosa DSM 4126] Length = 212 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 85/210 (40%), Positives = 121/210 (57%), Gaps = 7/210 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +Y ++GR + TV+ C V + + +GY A+Q+G E K KN Sbjct: 2 SGIIGKKIGMTSIYGVDGRNVACTVIEAGPCVVTQVKKEETDGYSAIQLGYEERKEKNTP 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFR----VQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIG 117 K ++G F + +PKKKL EFR D +G + F G VDV G + G Sbjct: 62 KALQGHFKNAQTTPKKKLAEFREYEGYDTFVDKFTLGQTVTIGDVFEEGDYVDVAGSSKG 121 Query: 118 KGFSGAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 KGF G +KRH FGG +ATHG R+ GS G P RVF +MAGR GG+RV N Sbjct: 122 KGFQGVVKRHGFGGVGQATHGQHNRQRAPGSIGGASYPARVFPGMRMAGRTGGDRVKNTN 181 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILV 206 L V+ + ++ L+LV G +PGA KNS++++ Sbjct: 182 LRVLKLIPEKNLLLVSGSIPGA-KNSFVII 210 >gi|327274961|ref|XP_003222243.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like [Anolis carolinensis] Length = 329 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 78/216 (36%), Positives = 117/216 (54%), Gaps = 5/216 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NG-YMAVQVGAGEAKVK 59 R G++A KLGM ++ +G ++ VT+L + +C V+ H ++ +G Y A+ VGA Sbjct: 78 RVGIIAVKLGMMPLWTKKGEKLAVTLLQVQDCHVIRHIPKEESDGKYPALIVGAKNVSQF 137 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 S + + +V + K+K+ FRV ++ ++ G+ ++F GQ VDVT TIGKG Sbjct: 138 QKSVSILEMYRAVGLPVKQKISTFRVTEN-AIIKPGTPLYAAHFRPGQYVDVTAKTIGKG 196 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR F G A+HG + +HR G+ +VFK KKM G++G T K L+V Sbjct: 197 FQGVMKRWGFKGQPASHGQTKTHRRPGAI-SNSKVAKVFKGKKMPGQLGNWYRTTKGLKV 255 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 V K +I V G VPG +N + V DS A Sbjct: 256 WRVSTKFNVIYVHGSVPG-HRNCLVKVSDSSLPAYR 290 >gi|196228455|ref|ZP_03127322.1| ribosomal protein L3 [Chthoniobacter flavus Ellin428] gi|196227858|gb|EDY22361.1| ribosomal protein L3 [Chthoniobacter flavus Ellin428] Length = 215 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 89/208 (42%), Positives = 129/208 (62%), Gaps = 3/208 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +K+GMT VY+ +G+ PVTV+ V+ +T + +GY+ VQVG K + Sbjct: 1 MKIGLLGKKIGMTRVYDDKGKATPVTVIEAGGNTVLQTKTQENDGYVGVQVGFDVQKEQR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++P+ G F PKK + EFR+ DD L S S F VG +VDV G + GKGF Sbjct: 61 VTQPLLGHFKKAGSEPKKLVKEFRL-PDDVKLDGALDLSVSQFAVGDVVDVIGRSKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +++HN G A+HG S+ HR +G+ G R PGR++KN M G MG RVTV+NL+VV Sbjct: 120 QGVIRKHNMAGQGASHG-SMMHRRNGAIGNRSTPGRIWKNMGMPGHMGDERVTVQNLKVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208 V + G+IL+ G VPGA ++I++R Sbjct: 179 QVRPEEGVILISGAVPGAN-GTYIVIRP 205 >gi|269468075|gb|EEZ79789.1| ribosomal protein L3 [uncultured SUP05 cluster bacterium] Length = 278 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 97/223 (43%), Positives = 134/223 (60%), Gaps = 9/223 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG------ 54 M G+V +KLGMT + + +G V+V+ ++ +VV RT + +GY AVQV G Sbjct: 1 MAIGLVGQKLGMTRIMSEDGSATAVSVIKIEANRVVQTRTTEVDGYSAVQVTTGAKVNKK 60 Query: 55 -EAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113 EAKV+ V ++G ++ + L+EFR D + + S F S F G VDVTG Sbjct: 61 GEAKVRRVPSAIKGHYAKASQDIGLGLWEFR--ADANEIGDASSFDLSIFGAGHYVDVTG 118 Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 + GKGF G +KRHNF ATHG SISHR+ GSTG Q+PGRVFK KKMAG MG +VT Sbjct: 119 QSKGKGFQGGVKRHNFQMQDATHGNSISHRAIGSTGQCQEPGRVFKGKKMAGHMGDEQVT 178 Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 + LE++ VD +R L+LVKG +PG+K ++ + K +N Sbjct: 179 EECLEIIRVDSERNLLLVKGAIPGSKSGFVKVMLSAKKDKINS 221 >gi|121603120|ref|YP_980449.1| 50S ribosomal protein L3 [Polaromonas naphthalenivorans CJ2] gi|166233174|sp|A1VIQ0|RL3_POLNA RecName: Full=50S ribosomal protein L3 gi|120592089|gb|ABM35528.1| LSU ribosomal protein L3P [Polaromonas naphthalenivorans CJ2] Length = 226 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 87/215 (40%), Positives = 125/215 (58%), Gaps = 3/215 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GM ++ +G +PVTV+ + N +V +T +GY A+QV G K V+K Sbjct: 8 GLLGRKVGMMRLFTDDGDTVPVTVVDVSNNRVTQVKTEANDGYDALQVAFGSRKASRVTK 67 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVF-SPSYFTVGQLVDVTGMTIGKGFS 121 P G + V + L EFRV D G+V + F VGQLVDV G +IGKGF+ Sbjct: 68 PEAGHLAKAGVEAGEILKEFRVTADVAGKYAAGTVVPAADIFAVGQLVDVQGTSIGKGFA 127 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRH RA+HG S SH GS G QDPGRVF K+M G +G T +NL++V Sbjct: 128 GTIKRHKMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTKTTQNLDIVR 187 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 +D+ R L++++G VPG+ K ++ VR + K+ Sbjct: 188 IDEARQLLMIRGAVPGS-KGGFVTVRAAIKAKPTA 221 >gi|71894653|ref|YP_278761.1| 50S ribosomal protein L3 [Mycoplasma synoviae 53] gi|109893527|sp|Q4A5C1|RL3_MYCS5 RecName: Full=50S ribosomal protein L3 gi|71851441|gb|AAZ44050.1| 50S ribosomal protein L3 [Mycoplasma synoviae 53] Length = 268 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 86/220 (39%), Positives = 124/220 (56%), Gaps = 7/220 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT +Y+ G IPVTV+ + V T NGY AVQ+ + + K + Sbjct: 2 KGILGRKVGMTQIYSETGTAIPVTVIEVKPNVVTKVLTKQSNGYEAVQLSVFDKREKLSN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F N +PK+ + E R + + +G + F+VG+LVDV+G + GKGF+G Sbjct: 62 KPETGHFKKANTTPKRFVKEIR---NMNGYELGQSVLVNIFSVGELVDVSGTSKGKGFAG 118 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180 A+KR+N +HG + TG D RVFK M G +G + T++NLEVV Sbjct: 119 AIKRYNQHIGPKSHGGGGGSQPIRQTGSLGDISGNRVFKGMTMPGHLGSEKATLQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220 VD K L+LVKG VPGA KNS+++V+ + K + K V Sbjct: 179 KVDLKENLLLVKGSVPGA-KNSFVVVKSAVKG-LPAKAAV 216 >gi|37912950|gb|AAR05282.1| ribosomal protein L3 [uncultured marine gamma proteobacterium EB000-45B06] gi|40063177|gb|AAR38014.1| ribosomal protein L3 [uncultured marine bacterium 562] Length = 211 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 122/213 (57%), Gaps = 2/213 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K GMT ++ +G IPVT + + + +T ++GY A V K N Sbjct: 1 MSIGLIGKKSGMTRLFLEDGESIPVTAVSVCGNFLADIKTTSRDGYNAFVVSKVN-KSNN 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+K F+ +N+ P + D + VG + F +GQ VDVTG + GKG+ Sbjct: 60 VNKSKSEFYKKINLDPGILAEFRSGDEVADDMKVGKHLTADIFEIGQYVDVTGTSKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNF ATHG S+SHR+HGS G Q PGRV+K KKM+G MG + TV++L++V Sbjct: 120 AGVIKRHNFAMQDATHGNSLSHRAHGSIGQCQTPGRVWKGKKMSGHMGNVQKTVQSLKIV 179 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +D + ++ +KG VPG S + ++ + K + Sbjct: 180 DLDVENSVLYIKGAVPGFN-GSELKIKPALKKS 211 >gi|167972621|ref|ZP_02554898.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|167988466|ref|ZP_02570137.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|168362040|ref|ZP_02695219.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|195867671|ref|ZP_03079673.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|209553992|ref|YP_002284630.1| 50S ribosomal protein L3 [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550465|ref|ZP_03771414.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551135|ref|ZP_03772081.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|226730586|sp|B5ZB40|RL3_UREU1 RecName: Full=50S ribosomal protein L3 gi|171903367|gb|EDT49656.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209454|gb|EDU06497.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018930|gb|EDU56970.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|195660728|gb|EDX53983.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|209541493|gb|ACI59722.1| 50S ribosomal protein L3 [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225378950|gb|EEH01315.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379619|gb|EEH01981.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 233 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 78/210 (37%), Positives = 115/210 (54%), Gaps = 8/210 (3%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ K+GMT V+ G+ + TV++++ +V+ +T +K+GY A+Q+G K K ++KP Sbjct: 4 LLGTKVGMTQVFTETGKAVAATVIYVEPNKVLAVKTNEKDGYNAIQIGYETVKEKALNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + G F N PK+ + EFR D + VG+ + S F GQLV+ T G GF+G++ Sbjct: 64 LLGQFKKANSDPKRHIKEFR----DVVAEVGAELTVSEFEPGQLVNAQAYTKGHGFTGSI 119 Query: 125 KRHNFGGLRATHGVSISHRSHGSTG---CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 KRHNF HG HR GS RVFK K+ G G VT KNL V+ Sbjct: 120 KRHNFSMGPMGHGAGYPHRYVGSIAKGRGGSQAQRVFKGTKLPGHYGHELVTTKNLLVLD 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 V LIL+KG +PG K S +L++ + K Sbjct: 180 VKANENLILIKGAIPGP-KGSIVLLKSAKK 208 >gi|213403778|ref|XP_002172661.1| 50S ribosomal protein L3 [Schizosaccharomyces japonicus yFS275] gi|212000708|gb|EEB06368.1| 50S ribosomal protein L3 [Schizosaccharomyces japonicus yFS275] Length = 264 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 126/210 (60%), Gaps = 2/210 (0%) Query: 2 RSGVVARKLGMTCVYNIEG-RRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R G + K GMT V++ +++PVTVL D QVV +T ++GY AVQ+GAG N Sbjct: 47 RPGAILFKKGMTSVWDESTHQQVPVTVLQFDRVQVVGLKTEKRDGYSAVQMGAGLRLPHN 106 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 VS+ ++G FS+ V PK+ + EF+V+ D L VG+V +P YF VGQ VDV +T GKG Sbjct: 107 VSRALQGHFSANGVYPKRYVKEFQVKDDSCLPKVGTVLTPEYFQVGQHVDVKALTKGKGT 166 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR G +HG S SHRS G TG + P RV KKM+G MG TV+N+ V Sbjct: 167 AGVMKRWGLSGGNDSHGASKSHRSAGGTGQAKIPARVLPGKKMSGHMGHQFRTVQNMLVW 226 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 +V + ILVKG VPG + + V DS Sbjct: 227 AVHPEHDCILVKGAVPGPVEG-VVYVSDSI 255 >gi|255722617|ref|XP_002546243.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240136732|gb|EER36285.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 279 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 94/210 (44%), Positives = 128/210 (60%), Gaps = 1/210 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+ A K GM + G IP TVL +D+C+V+ + + GY ++ VG+ + N Sbjct: 57 RPGLFAIKRGMITWFRESGEAIPATVLEIDSCEVINSKNSEDYGYDSILVGSIDKLKNNK 116 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 + F +SPK K+ EFRV K D+L+ G+ + YF VGQ VD+ G+T GKGF+ Sbjct: 117 YETSIKMFEDAGISPKYKIGEFRVLKSDNLIEKGTELTADYFEVGQKVDIKGITKGKGFA 176 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR F G RATHGVS +HR+ G+ G Q+PGRV KKM GRMG N T NLEV+ Sbjct: 177 GVMKRWGFSGGRATHGVSKAHRTPGAMGGNQNPGRVLPGKKMPGRMGCNNKTEFNLEVLF 236 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D + G+++VKG VPG K+ + VRD+ K Sbjct: 237 TDKEAGVLIVKGNVPGPKRG-IVRVRDAIK 265 >gi|148689149|gb|EDL21096.1| mitochondrial ribosomal protein L3, isoform CRA_a [Mus musculus] Length = 304 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 73/212 (34%), Positives = 108/212 (50%), Gaps = 5/212 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R G++A KLGM ++ +G++ VT+L + +C V+ + + + + G V Sbjct: 95 FRVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKIAALTVGGKTVSR 154 Query: 61 VSKP--MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 KP F+ + + PK+ F V D+ ++ G+ ++F GQ VDVT TIGK Sbjct: 155 FYKPDSRLEFYRDLGLPPKQIHKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGK 213 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G MKR F G A+HG + +HR G+ D RV+ KM GRMG TV L+ Sbjct: 214 GFQGVMKRWGFKGQPASHGQTKTHRRPGAI-STGDIARVWPGTKMPGRMGNQNRTVYGLK 272 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V V+ K +I V G VPG KN + V + Sbjct: 273 VWRVNTKHNIIYVNGSVPG-HKNCLVKVCTAV 303 >gi|11467717|ref|NP_050769.1| ribosomal protein L3 [Guillardia theta] gi|3914660|sp|O46894|RK3_GUITH RecName: Full=50S ribosomal protein L3, chloroplastic gi|3603042|gb|AAC35703.1| ribosomal protein L3 [Guillardia theta] Length = 204 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 83/203 (40%), Positives = 121/203 (59%), Gaps = 2/203 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ KLGMT +++ G IPVT+L + C V ++ K+ Y A+Q+G + K Sbjct: 1 MKIGLLGTKLGMTQIFDDNGSAIPVTILKVGPCYVTNLKSDTKDNYNAIQIGYQQVDAKK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP G N+ P K L E++V + S F +GQ+V V+G++IGKGF Sbjct: 61 LTKPQLGHLQVNNLPPLKHLKEYKVDATH-TFTIAQQLDVSIFELGQIVSVSGVSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNF THG S +HR GS G P +V K KKMAGR+GG++VT KNL VV Sbjct: 120 AGTVKRHNFTRGPMTHG-SKNHREPGSIGQGSTPAKVHKGKKMAGRLGGHQVTTKNLTVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSW 203 +D ++++KGCVPG + N Sbjct: 179 HLDKDNNVLVLKGCVPGKRGNIL 201 >gi|261880882|ref|ZP_06007309.1| 50S ribosomal protein L3 [Prevotella bergensis DSM 17361] gi|270332389|gb|EFA43175.1| 50S ribosomal protein L3 [Prevotella bergensis DSM 17361] Length = 204 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 79/205 (38%), Positives = 120/205 (58%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ RK+GMT V++ +G+ +P TV+ C V +T++ +GY AVQ+G GEAK +K Sbjct: 3 GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVENDGYEAVQIGFGEAKKSRTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 PM G F +PKK L EF+ ++D +G + F V+V G + GKGF G Sbjct: 63 PMAGIFKKAGTTPKKHLAEFKFEED---YNLGDAITVELFADADFVNVVGTSKGKGFQGV 119 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH F G + THG R GS G P +VFK +M G+MGG+RV +NL+V+ V Sbjct: 120 VKRHGFAGVGQRTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVKTRNLKVLKV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 ++ L++VKG G K ++ ++ + Sbjct: 180 IPEQNLLIVKGSFAGCKGSTVLIEK 204 >gi|325280968|ref|YP_004253510.1| 50S ribosomal protein L3 [Odoribacter splanchnicus DSM 20712] gi|324312777|gb|ADY33330.1| 50S ribosomal protein L3 [Odoribacter splanchnicus DSM 20712] Length = 207 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 86/205 (41%), Positives = 127/205 (61%), Gaps = 4/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V+++EG+ IP TV+ C V +T++K+GY A+Q+G E K K+ +K Sbjct: 5 GLIGKKVGMTSVFSVEGKSIPCTVIECGPCVVTQVKTIEKDGYEALQLGFDEKKEKHTTK 64 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 + G F +PK+KL EF ++ +G V + VD+ G + GKG+ G Sbjct: 65 QLSGHFKKAGTTPKRKLVEFAGFAEEH--KLGDVIDVTILEGTAYVDIVGTSKGKGYQGV 122 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH FGG +ATHG R GS G P RVFK +M GRMGG+RVTV+NLEV+ V Sbjct: 123 VKRHGFGGVGQATHGQHNRLRKPGSIGACSTPARVFKGMRMGGRMGGDRVTVENLEVLKV 182 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 + L+LVKG VPG+ K S+++++ Sbjct: 183 IPENNLLLVKGSVPGS-KGSYVIIQ 206 >gi|257456892|ref|ZP_05622073.1| 50S ribosomal protein L3 [Treponema vincentii ATCC 35580] gi|257445601|gb|EEV20663.1| 50S ribosomal protein L3 [Treponema vincentii ATCC 35580] Length = 208 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 87/210 (41%), Positives = 123/210 (58%), Gaps = 5/210 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GMT +++ EGR PVTVL + VV + D GY AV +G GE K VS Sbjct: 2 VGLIGKKIGMTQLFDEEGRLTPVTVLQVVPNTVVAVKDADHFGYEAVVLGTGELKEGRVS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K F+ V+P + L EFR D + VG+ + +D+T ++ GKGF G Sbjct: 62 KVYANQFAE-GVAPVRLLKEFRGF--DKEVAVGAKIGVEVLESVRYLDITAISKGKGFQG 118 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR FGG RA+HG S HR GSTG PGR FKN KM G MG RVTV+NL + + Sbjct: 119 VVKRWGFGGGRASHG-SKFHREAGSTGQCTSPGRSFKNVKMPGHMGAERVTVQNLRIEKI 177 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D + G+++V+G VPG KK++ + ++ + K Sbjct: 178 DPELGVVMVRGSVPG-KKDAVVFLKSAVKR 206 >gi|301059231|ref|ZP_07200168.1| 50S ribosomal protein L3 [delta proteobacterium NaphS2] gi|300446666|gb|EFK10494.1| 50S ribosomal protein L3 [delta proteobacterium NaphS2] Length = 207 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 85/209 (40%), Positives = 117/209 (55%), Gaps = 2/209 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M + + +K+GMT + G+ PVTV+ + C V +T++K GY A+Q+G G K Sbjct: 1 MVNKLFGKKIGMTRYFLEGGKSEPVTVVKIAPCVVTQKKTVEKEGYNAIQIGFGPKDEKR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP++G F + L E +V D D +G F +G V V G + G+GF Sbjct: 61 TNKPLKGHFEASGGKCFAYLNEVKVD-DVDAFELGQEIKSDVFAIGDTVHVRGRSKGRGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKR FGG R THG S SHR GS GC DP RV K +KM GRMG VT KNL+VV Sbjct: 120 AGVMKRWGFGGGRKTHG-SRSHRVPGSIGCSADPARVVKGRKMPGRMGNTHVTTKNLKVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 + ++L+KG VPGA+ N + + S Sbjct: 179 DIRPDMDILLLKGPVPGARGNLLEIFKAS 207 >gi|163783906|ref|ZP_02178880.1| ribosomal protein L03 [Hydrogenivirga sp. 128-5-R1-1] gi|159880827|gb|EDP74357.1| ribosomal protein L03 [Hydrogenivirga sp. 128-5-R1-1] Length = 230 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 89/211 (42%), Positives = 128/211 (60%), Gaps = 5/211 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M +G++ +K+GMT ++ G+ IPVTV+ ++ +V RT +K+GY AV +G GE K K Sbjct: 1 MPTGIIGKKIGMTRIF-KNGKAIPVTVIQVEPNYIVGIRTKEKDGYSAVILGTGEKKEKR 59 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119 KP+ F + P + L EF +++ + VG F G LVDV G + G+G Sbjct: 60 TPKPLLKIFEKAGLKPLRVLKEFPLKEGEQP-EVGKEVKVEEVFQPGDLVDVAGKSKGRG 118 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+ AMKR +FGG R +HG S HR+ GS G +P RVFK K+MAG G RV+V LEV Sbjct: 119 FTSAMKRWDFGGFRKSHG-SRYHRAVGSVGAATEPSRVFKGKRMAGHYGNERVSVLGLEV 177 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V + ++ +ILVKG VPGA K S++ ++ S Sbjct: 178 VDIIPEKSVILVKGSVPGATK-SYVELKASV 207 >gi|189218695|ref|YP_001939336.1| Ribosomal protein L3 [Methylacidiphilum infernorum V4] gi|189185553|gb|ACD82738.1| Ribosomal protein L3 [Methylacidiphilum infernorum V4] Length = 221 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 83/211 (39%), Positives = 129/211 (61%), Gaps = 3/211 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ARK+GMT +++ G P+TVL + VV + + + +QVG + +SK Sbjct: 14 GIMARKIGMTQLFDATGTMHPLTVLVAEPNVVVQCKKEGEGKEVRLQVGYEALPERKLSK 73 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G + +SP++ L EF + ++ P G + S F G+ VDV G+T GKGF G Sbjct: 74 PLLGHYKKSGISPRRHLKEFVFESEESWQP-GQLLDVSRFNEGEKVDVIGITKGKGFQGV 132 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +K+H FGG A+HG S +HR +G+ G R PGRVFKN+ M G MG +VT++NL++ + Sbjct: 133 IKKHGFGGQPASHG-SKTHRRNGAIGERSFPGRVFKNQGMPGHMGRKKVTIQNLDLFKII 191 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 + ++LVKG VPGA K ++VR + K++V Sbjct: 192 PEDNVLLVKGSVPGA-KGDMVIVRKAIKASV 221 >gi|160914559|ref|ZP_02076774.1| hypothetical protein EUBDOL_00565 [Eubacterium dolichum DSM 3991] gi|158433717|gb|EDP12006.1| hypothetical protein EUBDOL_00565 [Eubacterium dolichum DSM 3991] Length = 234 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 78/219 (35%), Positives = 115/219 (52%), Gaps = 5/219 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RKLGMT V+ +G IPVTV+ V+ +T++ +GY AVQ+G + K K + Sbjct: 7 KGILGRKLGMTQVFTEDGTLIPVTVVEACPNIVLQKKTVENDGYNAVQIGFEDIKEKRTT 66 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G N + K+ E R D L +G+ F G+ VDV G + GKG++G Sbjct: 67 KANVGHAKKANTTAKRFAREVR-DADFADLDLGAEVKVDIFVAGETVDVIGTSKGKGYNG 125 Query: 123 AMKRHNFGGLRATHGVSISHRSHGST---GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 + R+N THG S + R GS G G++ K MAG+ GG R T +NL V Sbjct: 126 TIVRNNAHQGPKTHGGSKNIRHIGSLATNGITSRQGKILKGTIMAGQEGGYRTTNQNLTV 185 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 + VD + +L+KG VPG K+ ++VR + S N + Sbjct: 186 IKVDVENNYLLIKGNVPGPKRG-LVMVRSAKCSKGNSEP 223 >gi|46109318|ref|XP_381717.1| hypothetical protein FG01541.1 [Gibberella zeae PH-1] Length = 332 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 100/219 (45%), Positives = 140/219 (63%), Gaps = 3/219 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +RSGV+A K GMT ++ + R+P TVL LD QVV ++T +KNGY AVQ+G G +N Sbjct: 75 LRSGVLAVKKGMTSMF-VGKIRVPCTVLQLDQVQVVANKTREKNGYWAVQIGQGSRDGRN 133 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+ P+ G++ + ++PK +L EF+V+ D LLPVG P +F GQ VDV G + G GF Sbjct: 134 VTSPLLGYYEAKGIAPKAELAEFKVRDKDGLLPVGVQILPDWFKKGQYVDVKGRSRGMGF 193 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179 +G MKRH F G A+HG S +HR+ G+TG Q G RV KKM GRMG VTV+NL+V Sbjct: 194 AGGMKRHGFSGQEASHGNSKNHRTIGTTGPSQGSGSRVMPGKKMPGRMGNEFVTVQNLKV 253 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 + VD++ G++LV G + G K + ++DS K + Sbjct: 254 MMVDNELGIVLVGGPIAGP-KGRVVRLQDSKKRKAPPQP 291 >gi|293402501|ref|ZP_06646636.1| 50S ribosomal protein L3 [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304015|gb|EFE45269.1| 50S ribosomal protein L3 [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 241 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 80/222 (36%), Positives = 119/222 (53%), Gaps = 8/222 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RKLGMT V+ EG IPVTV+ V+ +T++ +GY AVQ+G + K + Sbjct: 16 KGILGRKLGMTQVFTEEGTLIPVTVVEATPNVVLQKKTVENDGYEAVQLGFEDVKETRST 75 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP +G + N +PK+ E R + D + +G F G+ VDV G + GKG++G Sbjct: 76 KPSKGHAAKANTAPKRFAQEIRDCELD--VNLGDEVKVDIFAAGETVDVIGTSKGKGYNG 133 Query: 123 AMKRHNFGGLRATHGVSISHRSHGST---GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 + R+N +HG S HR GS G G++ K MAG+ GG R T +NL + Sbjct: 134 TIVRNNAKIGPKSHG-SGHHRHIGSLATNGITSRQGKILKGTIMAGQEGGYRTTNQNLTI 192 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 V VD + +L+KG VPG K ++VR + K + K V+ Sbjct: 193 VKVDVENNYLLIKGNVPGP-KCGLVMVRTA-KCSKGDKAPVT 232 >gi|297671980|ref|XP_002814097.1| PREDICTED: LOW QUALITY PROTEIN: 39S ribosomal protein L3, mitochondrial-like [Pongo abelii] Length = 374 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 78/221 (35%), Positives = 114/221 (51%), Gaps = 6/221 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKV 58 R G++A KLGM ++ +G++ VT+L + +C V+ + + + NG MA + VG Sbjct: 122 FRVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENHNGKMATLSVGGKTVSR 181 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 + + F+ + + PK+ + F + + L ++F GQ VDVT TIGK Sbjct: 182 FRKATSILEFYRELGLPPKQTVKXFNITDNAALNR--HSLYAAHFRPGQYVDVTAKTIGK 239 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G MKR F G ATHG + +HR G+ D GRV+ KM G+MG T L+ Sbjct: 240 GFQGVMKRWGFKGQPATHGQTKTHRRPGAV-ATGDIGRVWPGTKMPGKMGNIYRTEYGLK 298 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 V ++ K +I V G VPG KN + VRDS A GK Sbjct: 299 VWRINTKHNIIYVNGSVPG-HKNCLVKVRDSSMPAYKDLGK 338 >gi|161723281|ref|NP_758399.2| 50S ribosomal protein L3 [Mycoplasma penetrans HF-2] gi|42559645|sp|Q8EUB3|RL3_MYCPE RecName: Full=50S ribosomal protein L3 Length = 310 Score = 223 bits (570), Expect = 9e-57, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 116/211 (54%), Gaps = 7/211 (3%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ RK+GM + +GRRIPVT++ + V+ ++T +KNGY+A +VG + + K ++KP Sbjct: 4 ILGRKIGMIQSFLEDGRRIPVTIIQAEPNVVLENKTQEKNGYVATKVGFQQIEEKKLNKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +G+F + K EFR + VG F G VD +T GKGF+GA+ Sbjct: 64 QKGYFKKIKTDAFKHTKEFR---NVSGYNVGDKILVDIFNSGDKVDAQAITKGKGFTGAI 120 Query: 125 KRHNFGGLRATHGVSISHRSHGSTG---CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 KR NF HG HR GS RV K +KM+G G VT+ NL VVS Sbjct: 121 KRWNFKVGPLGHGAGYPHRYQGSISFGRGGSQGQRVPKGQKMSGHYGHELVTISNLTVVS 180 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 ++ ++ LILVKG VPG NS +L++ + KS Sbjct: 181 IELEKNLILVKGSVPGPV-NSLVLLKTTVKS 210 >gi|294155415|ref|YP_003559799.1| 50S ribosomal protein L3 [Mycoplasma crocodyli MP145] gi|291600390|gb|ADE19886.1| 50S ribosomal protein L3 [Mycoplasma crocodyli MP145] Length = 269 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 82/215 (38%), Positives = 117/215 (54%), Gaps = 6/215 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT VY G+R+ VTV+ + V + +KNGY A+Q+ + K + Sbjct: 2 KGILGRKVGMTQVYTETGQRVAVTVIEVQPNVVTKVLSQEKNGYTAIQLAVFDKKASRSN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ +PK+ + E R D +G V + F G+LVDVTG + GKGF+G Sbjct: 62 KPETGHFAKAKTTPKRYVKEVR---DMSGYELGQVLQANVFKAGELVDVTGTSKGKGFAG 118 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180 +KRHN +HG + TG D +V K M G++G R TV+NLEVV Sbjct: 119 TIKRHNQHIGPKSHGGGGGSQPVRQTGSLGDIAGNKVVKGMTMPGQLGNERTTVQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 VD L+L+KG +PG KK S+++VR K N Sbjct: 179 KVDLVNNLLLIKGSIPGPKK-SFVMVRQGVKGLAN 212 >gi|94266253|ref|ZP_01289960.1| Ribosomal protein L3 [delta proteobacterium MLMS-1] gi|93453179|gb|EAT03643.1| Ribosomal protein L3 [delta proteobacterium MLMS-1] Length = 209 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 112/202 (55%), Gaps = 3/202 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GMT V+ G +PVTV+ C V+ +T+ K GY A+QVG G ++ Sbjct: 5 MGLLGKKVGMTRVFTETGAAVPVTVIQAGPCVVLQKKTVAKEGYSAIQVGFGPRSEARLN 64 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121 K G + + + EFRV D + +G S +G LVD+ G + G+GF Sbjct: 65 KAEAGHVKAAGKGGFEFVREFRVS-DPEAYQLGQEISVGDLLNIGDLVDIRGKSKGRGFQ 123 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR+ F G RATHG S+ HR+ G+ GC P RV K KKM G+MG +T KN +V Sbjct: 124 GVVKRYGFKGGRATHG-SMFHRAPGAIGCSAWPSRVIKGKKMPGQMGDKYITKKNCTIVD 182 Query: 182 VDDKRGLILVKGCVPGAKKNSW 203 + + +I++KG VPG+ + Sbjct: 183 IRPESNVIVLKGGVPGSSQGVL 204 >gi|261749470|ref|YP_003257156.1| 50S ribosomal protein L3 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497563|gb|ACX84013.1| 50S ribosomal protein L3 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 210 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 83/205 (40%), Positives = 127/205 (61%), Gaps = 3/205 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ LGMT +++ G IP T++ + C V+ +T++K+GY A+Q+G + K K+ +K Sbjct: 3 GLIGINLGMTSLFSKNGENIPCTIVKVGPCYVIQVKTMEKDGYSAIQLGIIDKKEKHTTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 ++G F + PKKKL EF+ + +GS + + F G+LVDV G+T GKGF G Sbjct: 63 ALQGHFRKSGIFPKKKLLEFK-DVLSPSIKLGSQININSFVEGELVDVRGITKGKGFQGV 121 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH F G +HG R+ GS G DP R+FK KKMAGRMGG VT+KNL ++ + Sbjct: 122 VKRHKFSGVGERSHGQHNRLRAPGSVGAGSDPSRIFKGKKMAGRMGGKHVTIKNLTILKI 181 Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207 D + ++ G VPG KNS+++++ Sbjct: 182 DVTENIFILNGSVPG-NKNSYLMIK 205 >gi|237837257|ref|XP_002367926.1| ribosomal protein L3p, putative [Toxoplasma gondii ME49] gi|211965590|gb|EEB00786.1| ribosomal protein L3p, putative [Toxoplasma gondii ME49] gi|221509315|gb|EEE34884.1| 50S ribosomal protein L3, putative [Toxoplasma gondii VEG] Length = 514 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 87/209 (41%), Positives = 122/209 (58%), Gaps = 4/209 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K+GM +++ G R VTV +D C V+ RTLDK+GY A +G G + V Sbjct: 256 RTGLLAYKIGMMSLWDGWGERHAVTVCQVDRCVVMDQRTLDKDGYEACVMGIGYKPIHKV 315 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KPM G + + PK ++ EF+ D LLPVG S +FT GQ V V+G + KG+ Sbjct: 316 TKPMLGVYIRSQIEPKSRIAEFKCSSD-CLLPVGHEMSVRHFTPGQQVFVSGWSKDKGYL 374 Query: 122 GAMKRHNFGGLRATHGVS-ISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G KR F G A+HGV +H S GS G + V++ KKMAG GG+ V N +V Sbjct: 375 GVKKRWGFAGQNASHGVEAKAHSSPGSIGQSKTVNVVWRFKKMAGHAGGDPRVV-NCKVF 433 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 ++ +R LI +KGCVPG K S I + D+ Sbjct: 434 RIEAQRNLIFLKGCVPG-YKGSLIKISDA 461 >gi|327540578|gb|EGF27153.1| 50S ribosomal protein L3 [Rhodopirellula baltica WH47] Length = 217 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 77/219 (35%), Positives = 116/219 (52%), Gaps = 23/219 (10%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFS- 70 MT ++ +G +PVTV+ C V+ R+ D++GY AVQ+G + + + RG + Sbjct: 1 MTQIFLEDGTAVPVTVVQAGPCHVLQVRSKDRDGYEAVQMGFEDKPRRLAKRSERGQVAT 60 Query: 71 ------------------SVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 + P++ + EFR + + VG + F + VD+T Sbjct: 61 IESKRSKKRSAAGIEAPAKADCEPQRFVREFRGSSEAN---VGDTLTVEQFNDVKKVDIT 117 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G + G+GF+G MKRHNF G RATHGV HR G TG P R FK K+MAG+ G +V Sbjct: 118 GTSKGRGFAGVMKRHNFAGQRATHGVKKCHRHAGGTGMSASPSRTFKGKRMAGQYGNAKV 177 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 T +NLEVV VD + L++++G VPG ++ +R + K Sbjct: 178 TTRNLEVVRVDAENNLLMIRGAVPGPN-GGFVSIRQTNK 215 >gi|269215705|ref|ZP_06159559.1| 50S ribosomal protein L3 [Slackia exigua ATCC 700122] gi|269131192|gb|EEZ62267.1| 50S ribosomal protein L3 [Slackia exigua ATCC 700122] Length = 206 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 86/209 (41%), Positives = 117/209 (55%), Gaps = 3/209 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M + + +KLGMT ++N + +PVTV+ + V +T + +GY AVQ+G G K K Sbjct: 1 MINAIYGKKLGMTQLFNENDQVVPVTVIVAEPNTVCQVKTKETDGYEAVQLGFGAIKAKK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V+KPM G F+ V P + L E RV+ D VG + F + V VTG +IGKGF Sbjct: 61 VNKPMGGHFAKSGVEPTRHLREVRVESAAD-YKVGDTQTVEAFADVKKVHVTGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR + + HR+ GS G P RVFK +M G MG + VT KNLEVV Sbjct: 120 QGVIKR-HGFAGGPGGHGAHFHRAPGSVGQCATPSRVFKGVRMPGHMGTDTVTTKNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +D ++ LILVKG VPGA K + VR + Sbjct: 179 RIDAEQNLILVKGAVPGA-KGGIVRVRMA 206 >gi|327399523|ref|YP_004340392.1| 50S ribosomal protein L3 [Hippea maritima DSM 10411] gi|327182152|gb|AEA34333.1| 50S ribosomal protein L3 [Hippea maritima DSM 10411] Length = 206 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 99/203 (48%), Positives = 129/203 (63%), Gaps = 4/203 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++A+KLGMT +Y +EG+ IPVTVL + +T +K+GY A+QVG + K K V+K Sbjct: 3 GLIAKKLGMTQLY-VEGKAIPVTVLEAQEGVITDIKTKEKDGYNAIQVGFIDTKEKRVTK 61 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G + V VSPKK L EFRV D D V F G++VDV G T G+GFSG Sbjct: 62 PLLGVYKKVGVSPKKILKEFRVD-DVDSFEVKGEVKVDIFQKGEIVDVIGHTKGRGFSGV 120 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRHNF G HG S+ +R GS G + PGRV K +KM G G RVT+KNLEVV VD Sbjct: 121 MKRHNFAGGPDGHG-SMFNRRVGSIGNCEFPGRVVKGRKMPGHYGNERVTIKNLEVVFVD 179 Query: 184 DKRGLILVKGCVPGAKKNSWILV 206 ++ LI +KG VPG+ K S++ + Sbjct: 180 PEKKLIAIKGAVPGS-KGSYVNI 201 >gi|256371215|ref|YP_003109039.1| ribosomal protein L3 [Acidimicrobium ferrooxidans DSM 10331] gi|256007799|gb|ACU53366.1| ribosomal protein L3 [Acidimicrobium ferrooxidans DSM 10331] Length = 213 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 86/211 (40%), Positives = 118/211 (55%), Gaps = 2/211 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R V K+GMT V+ R +PVTV+ + VV +T +++GY AVQV G K + + Sbjct: 3 RKTFVGEKVGMTQVWTEGDRAVPVTVIKVVPTWVVRTKTPERDGYEAVQVAVGRVKPQRL 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 S+P+ G F + V ++ E R+ P G G +DV G++ G GFS Sbjct: 63 SRPVAGQFEARGVEAGARIMELRLDGASSFEP-GDQIGIEGIEPGMRLDVVGVSKGHGFS 121 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF G A HG HR+ GS G P RVFK +MAG+ G RVT+ NLEVV Sbjct: 122 GGMKRHNFRGQGAAHGNHKKHRAPGSIGACATPARVFKGTRMAGQYGTERVTIHNLEVVR 181 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + +R L+LVKG +PG + + ++VRDS K Sbjct: 182 AEPERQLVLVKGSIPGP-RGAIVVVRDSVKG 211 >gi|256847763|ref|ZP_05553208.1| 50S ribosomal protein L3 [Lactobacillus coleohominis 101-4-CHN] gi|256715452|gb|EEU30428.1| 50S ribosomal protein L3 [Lactobacillus coleohominis 101-4-CHN] Length = 220 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 121/212 (57%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGKKVGMTQVFTDNGELVPVTVVDVTPNVVMQIKTVENDGYNAVQLGFDDKREIL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +K +G + N +PK+ + E R + D + VG F G+ VDVTG+T G G+ Sbjct: 61 SNKAEQGHAAKANTAPKRFIGEIRDAELGDDIKVGDEVKADIFAEGETVDVTGITKGHGY 120 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G + + HG S HR GS G VFK KK+ GRMGGN T+++L+VV Sbjct: 121 QGNIHKDGQSRGPMAHG-SRYHRRPGSLGAI--INHVFKGKKLPGRMGGNTRTMQHLQVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + ++L+KG VPGA K S++ +++S K+ Sbjct: 178 KVDTENNVLLIKGNVPGANK-SYVTIKNSVKA 208 >gi|195952643|ref|YP_002120933.1| ribosomal protein L3 [Hydrogenobaculum sp. Y04AAS1] gi|226730524|sp|B4U744|RL3_HYDS0 RecName: Full=50S ribosomal protein L3 gi|195932255|gb|ACG56955.1| ribosomal protein L3 [Hydrogenobaculum sp. Y04AAS1] Length = 232 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 86/207 (41%), Positives = 122/207 (58%), Gaps = 3/207 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +KLGM V+ +G IPVT + ++ VV ++ + +GY A+QVG+ K Sbjct: 2 IGLIGKKLGMMRVFLNDGTAIPVTAIKVEPNYVVYIKSSETDGYNAIQVGSIPLKQSRFK 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KPM G F N++P K L EFRV D +G F+ G+LVD+ G + G+GF+G Sbjct: 62 KPMVGHFKKANLTPLKYLKEFRVD-DVSSFALGQELGVDIFSPGELVDIVGRSKGRGFTG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKR +FGG +HG HR+ GS G R DPGRV+K+K+MAGR G + V+ L VV V Sbjct: 121 TMKRWDFGGFPKSHG-HRYHRAVGSVGNRTDPGRVWKSKRMAGRHGNETIRVQALVVVDV 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDS 209 +G+ILV G VPG K+ + + S Sbjct: 180 LKDKGIILVNGSVPG-HKDGIVYIEKS 205 >gi|223983921|ref|ZP_03634081.1| hypothetical protein HOLDEFILI_01362 [Holdemania filiformis DSM 12042] gi|223964113|gb|EEF68465.1| hypothetical protein HOLDEFILI_01362 [Holdemania filiformis DSM 12042] Length = 230 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 78/222 (35%), Positives = 125/222 (56%), Gaps = 5/222 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RKLGMT V+ +G IPVTV+ V+ +TL+ +GY AVQ+G + K + Sbjct: 2 KGILGRKLGMTQVFTTDGVLIPVTVVEALPNVVLQKKTLENDGYEAVQLGFEDLSEKGSN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K +G + + + K+ + E R + + L VG+ F G++VDVTG + G+G++G Sbjct: 62 KAEKGHAAKASTAAKRFVREIRGTEMTN-LEVGNEVKVDLFAAGEIVDVTGTSKGRGYNG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTG-CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 + R+N THG S + R GS ++ GR+ K AG+ GG T +NLE++ Sbjct: 121 TIVRNNATMGPKTHGGSKNMRHIGSLATTGRNNGRIEKGTAGAGQEGGYTTTTQNLEIIK 180 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK--SAVNCKGKVS 221 VD + +L+KG VPG K+ ++V+ S K +AV+ K +S Sbjct: 181 VDVENNYMLIKGNVPGPKRG-LVVVKSSVKGTAAVSAKDLIS 221 >gi|320526869|ref|ZP_08028059.1| 50S ribosomal protein L3 [Solobacterium moorei F0204] gi|320132837|gb|EFW25377.1| 50S ribosomal protein L3 [Solobacterium moorei F0204] Length = 253 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 114/211 (54%), Gaps = 4/211 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RKLGMT V+ IEG IPVTV+ + V+ +T + +GY AVQ+G + K + + Sbjct: 2 KGILGRKLGMTQVFTIEGTLIPVTVIDVKPNVVLQKKTKEVDGYEAVQLGYEDVKEQRSN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G N +PK + E R + + L VG+ F G +VDV G + GKG+SG Sbjct: 62 KPAIGHAKKANTAPKHYIKELRADEMMN-LEVGAEVKADLFKAGDVVDVQGTSKGKGYSG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 + R+N THG S HR GS + G V K M G+ G T +NL +V Sbjct: 121 TIVRNNAARGPMTHG-SGHHRHIGSLATNGRNNGVVNKGTVMPGQEGVYTTTNQNLTIVK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + G ILVKG VPG +K ++++ + K Sbjct: 180 VDAEEGYILVKGNVPGPRKG-LVVIKTTVKP 209 >gi|221488825|gb|EEE27039.1| 50S ribosomal protein L3, putative [Toxoplasma gondii GT1] Length = 514 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 87/209 (41%), Positives = 122/209 (58%), Gaps = 4/209 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K+GM +++ G R VTV +D C V+ RTLDK+GY A +G G + V Sbjct: 256 RTGLLAYKIGMMSLWDGWGERHAVTVCQVDRCVVMDQRTLDKDGYEACVMGIGYKPIHKV 315 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KPM G + + PK ++ EF+ D LLPVG S +FT GQ V V+G + KG+ Sbjct: 316 TKPMLGVYIRSQIEPKSRIAEFKCSSD-CLLPVGHEMSVRHFTPGQQVFVSGWSKDKGYL 374 Query: 122 GAMKRHNFGGLRATHGVS-ISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G KR F G A+HGV +H S GS G + V++ KKMAG GG+ V N +V Sbjct: 375 GVKKRWGFAGQNASHGVEAKAHSSPGSIGQSKTVNVVWRFKKMAGHAGGDPRVV-NCKVF 433 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 ++ +R LI +KGCVPG K S I + D+ Sbjct: 434 RIEAQRNLIFLKGCVPG-YKGSLIKISDA 461 >gi|294654997|ref|XP_002770064.1| DEHA2B02684p [Debaryomyces hansenii CBS767] gi|199429613|emb|CAG85072.4| DEHA2B02684p [Debaryomyces hansenii] Length = 278 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 97/210 (46%), Positives = 138/210 (65%), Gaps = 2/210 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ K GM Y +G++ TV+ +DNC+V+ ++T+D +GY +V +G + K+KN+ Sbjct: 61 RPGLLGVKRGMITWYTDDGKQFGATVIEIDNCEVIENKTVDTHGYTSVLLGQCD-KLKNI 119 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 + F VSPKK + EFR++ + L+PVG+ + YF VGQLVDV +T GKGF+ Sbjct: 120 TDKNLRKFQEAGVSPKKHIGEFRIRDESGLIPVGTELTADYFAVGQLVDVKAITKGKGFA 179 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F GL+A+HGVS +HRS GS G Q PGRV KKMAGRMGG TV N EV+ Sbjct: 180 GVMKRHGFKGLKASHGVSKAHRSAGSMGATQTPGRVLPGKKMAGRMGGKSCTVFNNEVLH 239 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D + G I++KG +PG + S++ + D+ K Sbjct: 240 ADAEAGFIVLKGQIPGPNR-SFVRISDAQK 268 >gi|296423844|ref|XP_002841462.1| hypothetical protein [Tuber melanosporum Mel28] gi|295637702|emb|CAZ85653.1| unnamed protein product [Tuber melanosporum] Length = 306 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 90/215 (41%), Positives = 129/215 (60%), Gaps = 2/215 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GV+A K GMT +Y GRRI TVL L+ QV +T K+GY AVQVG+G NV Sbjct: 76 RTGVLAVKKGMTAIYKPSGRRIACTVLQLERVQVTAVKTRQKHGYWAVQVGSGWRNSNNV 135 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 ++PM G F++ V+PK+ L EFRV+ + L+ G+ S +F GQ VDV G+GF+ Sbjct: 136 TRPMLGHFATAGVAPKEHLREFRVKDETGLMEPGTALSADFFVEGQYVDVRANCKGRGFA 195 Query: 122 GAMKRHNFGGLRATHGVSISHRSH-GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G MKRH F G A+HG S+SHR+ + + RV K+M GRMGG+RVT + +++ Sbjct: 196 GGMKRHGFSGQPASHGNSLSHRAMGSAGQSQGGGSRVLPGKRMPGRMGGHRVTRPHAQIM 255 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++ + G IL+ G VPG K + ++D+ Sbjct: 256 EINKELGTILLFGPVPGP-KGCIVAIQDTILGPPP 289 >gi|299753327|ref|XP_001833202.2| ribosomal protein L3 [Coprinopsis cinerea okayama7#130] gi|298410250|gb|EAU88475.2| ribosomal protein L3 [Coprinopsis cinerea okayama7#130] Length = 257 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 99/213 (46%), Positives = 132/213 (61%), Gaps = 5/213 (2%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVV-HRTLDKNG--YMAVQVGAGEAKVKNVSKPMRGF 68 M ++N +G + PVTVL LDNCQV +T + Y AVQV + + K ++ M G Sbjct: 1 MAALWNDQGVKFPVTVLQLDNCQVTANIKTPRPDHTVYHAVQVASTDRPPKTTTRQMLGH 60 Query: 69 FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128 F+ NV PK+ + EF V D +PVG+ + ++F GQ VDV +IGKGF G MKR Sbjct: 61 FAKANVPPKRYVKEFPVTAD-AHVPVGTTLNAAHFVPGQYVDVVAKSIGKGFQGGMKRWG 119 Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188 F GL A+HGVS+SHRS GS G QDPGR++ KKMAGRMGGN+VTV+NL VV VD L Sbjct: 120 FHGLAASHGVSVSHRSSGSAGNSQDPGRIYPGKKMAGRMGGNQVTVQNLAVVRVDTALNL 179 Query: 189 ILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 + V+G VPG N+ + +RD+ K + + Sbjct: 180 VYVRGAVPGVD-NAPVYIRDAKKVMAVARHNEA 211 >gi|50555650|ref|XP_505233.1| YALI0F10076p [Yarrowia lipolytica] gi|49651103|emb|CAG78040.1| YALI0F10076p [Yarrowia lipolytica] Length = 277 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 103/210 (49%), Positives = 140/210 (66%), Gaps = 3/210 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV--K 59 R+G +A K GM Y+ G +P TVL +D CQVV H+T +K+GY AVQVG G + Sbjct: 48 RTGALAFKRGMISWYDENGVHMPATVLEIDLCQVVGHKTEEKHGYNAVQVGMGHRNKALQ 107 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++K G FS+ V+PK+ + EFR++ D LLP+ + + S+F VGQ VDV + GKG Sbjct: 108 KMNKSKLGQFSAATVNPKQAVAEFRIRGKDGLLPITTEITASHFKVGQYVDVQATSKGKG 167 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG MKRH F GL A+HGVS+ HRS G+TG DPGRVF +KMAG MG VT+KN +V Sbjct: 168 FSGVMKRHGFSGLPASHGVSLKHRSGGTTGQNTDPGRVFPGRKMAGNMGNETVTLKNQKV 227 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +SVD+ G+++VKG VPG+ K + + D+ Sbjct: 228 LSVDEDTGIVIVKGMVPGS-KGKIVKLSDA 256 >gi|332170559|gb|AEE19814.1| 50S ribosomal protein L3 [Krokinobacter diaphorus 4H-3-7-5] Length = 203 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 79/206 (38%), Positives = 125/206 (60%), Gaps = 6/206 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ +K+GMT +++ G+ IP TV+ C + RT + +GY A+Q+G +AK N Sbjct: 2 SGLIGKKVGMTSIFDENGKNIPCTVIEAGPCVITQVRTKEADGYEALQLGFDDAKKANK- 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 G K+K+ EF+ + + +G + +F G+ VDV+G + GKGF G Sbjct: 61 -AAAGHAKKAGTVAKRKVVEFQGFEGE--FKLGDAITVDHFAEGEFVDVSGTSKGKGFQG 117 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH F G +ATHG R+ GS G P RVFK +MAGRMGG+++ V+NL+V+ Sbjct: 118 VVKRHGFRGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGDKIKVQNLKVLK 177 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 V ++ L++VKGCVPG KN++++++ Sbjct: 178 VVAEKNLLVVKGCVPG-HKNAYVIIQ 202 >gi|330837655|ref|YP_004412296.1| 50S ribosomal protein L3P [Spirochaeta coccoides DSM 17374] gi|329749558|gb|AEC02914.1| LSU ribosomal protein L3P [Spirochaeta coccoides DSM 17374] Length = 206 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 92/209 (44%), Positives = 122/209 (58%), Gaps = 5/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ EGR PVTV+ ++ VV RT +KNGY A +GA + K V+K Sbjct: 3 GLIGKKIGMTQVFDAEGRLTPVTVIKIEGNVVVADRTEEKNGYNAALLGAIDKKKSRVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F V+ K+ L EFR D + VG V F VDVTG T GKGF G Sbjct: 63 PYAGQFPE-GVAVKRNLVEFR--DFDKEVSVGEVLGVDLFKDIAFVDVTGTTKGKGFQGG 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G RA+HG S HR G T P FK +MAG MG R TV+NL VV VD Sbjct: 120 MKRHGFAGGRASHG-SKFHRDIGGTAMSTTPAHTFKGHRMAGHMGFERTTVQNLRVVRVD 178 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 ++ +++VKG +PG + S ++V+ + K Sbjct: 179 EELQVLMVKGAIPGPAQ-SVVIVKKAVKR 206 >gi|71018891|ref|XP_759676.1| hypothetical protein UM03529.1 [Ustilago maydis 521] gi|46099434|gb|EAK84667.1| hypothetical protein UM03529.1 [Ustilago maydis 521] Length = 373 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 100/218 (45%), Positives = 132/218 (60%), Gaps = 7/218 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG----YMAVQVGAGEAK 57 R G++A K GMT + G RIP TVL + + QV H + Y A+QV A + K Sbjct: 92 RVGLIAVKRGMTSFFLPNGERIPATVLQVHSNQVSAHIGFGPDATESTYTALQVAAVDTK 151 Query: 58 V-KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116 +V+K ++G + KK+ D L+P+G+ S +F GQ VDV +T Sbjct: 152 STYHVTKQIQGHLKKAGIIKGKKIIREFPVSSDALVPLGTQLSAVHFVPGQSVDVRAITR 211 Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV-TVK 175 G+GF G MKRH F GLRA+HGVSISHRSHGSTG QDPGRV+ KMAGRMGGN+ T+ Sbjct: 212 GRGFQGVMKRHGFHGLRASHGVSISHRSHGSTGANQDPGRVWPGTKMAGRMGGNKHGTIH 271 Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 NL VV VD ++ LI VKG VPG K S + ++D+ + + Sbjct: 272 NLLVVRVDAEKDLIYVKGNVPGPKGGS-VTLQDARRPS 308 >gi|225436243|ref|XP_002271466.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 281 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 82/209 (39%), Positives = 116/209 (55%), Gaps = 3/209 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 GV+A KLGM + EG+ +PVTV+ + V +T +GY AVQVG + + + Sbjct: 66 VGVMATKLGMMSYFEPEGKVVPVTVVGFREGNIVTQVKTEATDGYSAVQVGYRRVRDRKL 125 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G P + L EFR+ D P + F G LVDV+G+TIGKGF Sbjct: 126 TKPEMGHLEKAGTIPMRHLQEFRLVSVDGFEPNQKLVFEELFKEGDLVDVSGITIGKGFQ 185 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNF THG S SHR+ GS G PG V+K KKM GRMGG + ++ L++V Sbjct: 186 GGIKRHNFRRGPMTHG-SKSHRALGSIGAGTTPGHVYKGKKMPGRMGGTKTKIRKLKIVK 244 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 +D+ ++++KG VPG N + + + Sbjct: 245 IDNDLRVVMIKGAVPGKPGN-LLRITPAK 272 >gi|307718206|ref|YP_003873738.1| 50S ribosomal protein L3 [Spirochaeta thermophila DSM 6192] gi|306531931|gb|ADN01465.1| 50S ribosomal protein L3 [Spirochaeta thermophila DSM 6192] Length = 208 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 91/210 (43%), Positives = 122/210 (58%), Gaps = 4/210 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ RKLGMT V++ G +PVTV+ ++ VV RT +++GY A+ +GA K Sbjct: 2 VGVIGRKLGMTQVFDANGYVVPVTVIKVEKNTVVDVRTPERHGYRALVLGAFPLKASRAV 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F + PKK L E R + D G F + VDV G++ GKG+ G Sbjct: 62 KPYLGQFQKRGLEPKKVLREIRDFEGD--YKPGDEIGVEIFEGVRFVDVRGLSKGKGYQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F G A+HG S HR+HGSTG P +V K KMAGRMGG +V V+NL +V V Sbjct: 120 VMKRHGFSGGPASHG-SKFHRAHGSTGQSAYPSKVLKGTKMAGRMGGVQVCVQNLRIVEV 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +RG +LV+G VPG +K ++V + K Sbjct: 179 DKERGCLLVEGAVPGPRKG-VVIVTRAKKK 207 >gi|116199553|ref|XP_001225588.1| hypothetical protein CHGG_07932 [Chaetomium globosum CBS 148.51] gi|88179211|gb|EAQ86679.1| hypothetical protein CHGG_07932 [Chaetomium globosum CBS 148.51] Length = 380 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 101/218 (46%), Positives = 135/218 (61%), Gaps = 2/218 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+GV+A K GMT G RI TVL LD Q V+++T ++GY AVQVG GE N Sbjct: 86 LRAGVLAVKKGMTVFMGRTGARIACTVLQLDRVQTVLNKTRARHGYWAVQVGMGERNPGN 145 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V P+ G++ + ++PK+ L EFRV+ LLPVG P +F VGQ VDV + G GF Sbjct: 146 VGAPLLGYYEAKGMAPKEVLAEFRVRDQSGLLPVGVQLMPDWFHVGQRVDVRSNSRGMGF 205 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG-RVFKNKKMAGRMGGNRVTVKNLEV 179 +G MKRH F G A+HG S +HR+ GS G Q G RV KKM GRMG RVT++NL V Sbjct: 206 AGGMKRHGFSGQEASHGNSKNHRTIGSAGPSQGSGSRVLPGKKMPGRMGNQRVTIQNLPV 265 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 + D++ G+++VKGCV G K + I V+D+ K + Sbjct: 266 LIADNELGILVVKGCVAGP-KGAVIQVQDACKKDPPPQ 302 >gi|108804974|ref|YP_644911.1| 50S ribosomal protein L3P [Rubrobacter xylanophilus DSM 9941] gi|123368030|sp|Q1AU29|RL3_RUBXD RecName: Full=50S ribosomal protein L3 gi|108766217|gb|ABG05099.1| LSU ribosomal protein L3P [Rubrobacter xylanophilus DSM 9941] Length = 205 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 83/209 (39%), Positives = 114/209 (54%), Gaps = 6/209 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M + V ARK MT + +G + VTVL ++ V +T +K+GY AVQVG G K Sbjct: 1 MATAVFARKKYMTQAFQDDGTAVGVTVLEVEPNVVTAVKTAEKDGYEAVQVGFGAVKSGR 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V++P G F+ +++ P++ L E R VG F G V V+ + G+GF Sbjct: 61 VNRPHAGVFAKLDIPPRRYLRELRGVSG----EVGQTIGADAFEAGDRVHVSARSKGRGF 116 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KRH FG THG R GS G DP R+FK ++M G MG VTV+NLEVV Sbjct: 117 QGTVKRHGFGRGPVTHGSHNI-RQPGSVGASADPSRIFKGQRMPGHMGDRSVTVRNLEVV 175 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VD +R I V+G VPG +N+ + VR + Sbjct: 176 RVDAERNEIWVRGGVPGG-RNAIVKVRKA 203 >gi|225716532|gb|ACO14112.1| Mitochondrial 39S ribosomal protein L3 [Esox lucius] Length = 341 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 4/211 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59 R G+VA KLGM V+ G R VT+L + +C V+ + + ++ +G+ A + VG A Sbjct: 91 RVGLVAVKLGMAPVWTKMGDRQVVTLLQVQDCHVLKYLSKEEYDGHTAALLVGGKNASSF 150 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 S+ F V PK+K+ F+V D+ ++ G+ ++F GQ VDVT TIG G Sbjct: 151 YKSQEEMEMFRFAGVPPKQKISTFKVS-DNAIIKPGTPLYAAHFRPGQYVDVTAKTIGMG 209 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR+ F G ATHG + +HR G++G DP +VFK +KM GRMG T L+V Sbjct: 210 FQGVMKRYGFKGQPATHGQTKTHRRPGASGPGGDPAKVFKGRKMPGRMGNVFDTAHGLKV 269 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V+ + +I V G VPG +N + V DS Sbjct: 270 WRVNTRYNIIYVHGTVPG-HRNCILKVADSI 299 >gi|42526279|ref|NP_971377.1| 50S ribosomal protein L3 [Treponema denticola ATCC 35405] gi|81831476|sp|Q73PN1|RL3_TREDE RecName: Full=50S ribosomal protein L3 gi|41816391|gb|AAS11258.1| ribosomal protein L3 [Treponema denticola ATCC 35405] gi|325473223|gb|EGC76418.1| 50S ribosomal protein L3 [Treponema denticola F0402] Length = 208 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 90/211 (42%), Positives = 130/211 (61%), Gaps = 5/211 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GMT ++N G +PVTV+ ++ VV + +K GY +V +G GE K K+ S Sbjct: 2 IGLIGKKIGMTQIFNEVGHLMPVTVIQVEPNTVVALKDKEKFGYSSVVLGLGELKEKHTS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F S ++ P K L EFR D + VG F +D+T ++ GKGF G Sbjct: 62 KPYAGQF-SGDIKPLKLLKEFR--DFDKEVAVGDKLGVEAFEKVSYLDITAISKGKGFQG 118 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKR +GG RA+HG S HR GSTG PGR FKN M GRMG ++VTV+NL++V + Sbjct: 119 VMKRWGYGGGRASHG-SKFHREAGSTGHCTTPGRSFKNTTMPGRMGFDKVTVQNLQIVKI 177 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + G+I+V+G VPG KK++ + ++ + K A Sbjct: 178 DPELGVIMVRGSVPG-KKDATVFLKSAVKRA 207 >gi|291320506|ref|YP_003515770.1| 50S ribosomal protein L3 [Mycoplasma agalactiae] gi|290752841|emb|CBH40816.1| 50S ribosomal protein L3 [Mycoplasma agalactiae] Length = 267 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 81/212 (38%), Positives = 122/212 (57%), Gaps = 6/212 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT +Y G+RIPVTV+ + V T++KNGY+A Q+ E K K V+ Sbjct: 2 KGILGRKVGMTQIYTELGQRIPVTVIEVKPNVVSKVLTVEKNGYVATQLATVEKKAKRVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 +P+ G F +PK+ + E R + +G + S F+ G+LVD+TG++ GKGF+G Sbjct: 62 RPLAGQFIQAKTTPKQYIKEIR---GMEGYELGQEVNASIFSAGELVDITGISKGKGFAG 118 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180 +KR N +HG + TG D RV K M G +G + TV+NLE+V Sbjct: 119 TIKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVVKGMTMPGHLGSEKTTVQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD L+LVKG +PGAKK S+++++ + K Sbjct: 179 KVDTVNNLLLVKGSIPGAKK-SFVIIKQAVKG 209 >gi|295099237|emb|CBK88326.1| LSU ribosomal protein L3P [Eubacterium cylindroides T2-87] Length = 231 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 82/222 (36%), Positives = 118/222 (53%), Gaps = 7/222 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RKLGMT V+ +G IPVTV+ V+ +T +GY AVQ+G E K K + Sbjct: 2 KGLLGRKLGMTQVFTEDGVLIPVTVVEATPNVVLQKKTAQSDGYDAVQLGFEEIKEKRTT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G N SPK+ + E V+ D + VG + + F G+ VDV G + GKG++G Sbjct: 62 KANIGHCKKANTSPKRFIKE--VRNCDMEVNVGDLIDVTIFAAGETVDVIGTSKGKGYNG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGST---GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 + R+N +HG S + R GS G GR+ K MAG+ GG T NL V Sbjct: 120 TIVRNNAHQGPKSHGGSKNIRHIGSLATNGITSRQGRIMKGTIMAGQEGGYTTTNPNLTV 179 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 + VD + +L+KG VPG KK ++VR + K++ K V+ Sbjct: 180 IKVDKENNYLLIKGNVPGPKKG-LVMVRTA-KTSKGDKEPVT 219 >gi|157134546|ref|XP_001656360.1| Mitochondrial 39S ribosomal protein L3 [Aedes aegypti] gi|108870456|gb|EAT34681.1| Mitochondrial 39S ribosomal protein L3 [Aedes aegypti] Length = 372 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 70/230 (30%), Positives = 111/230 (48%), Gaps = 15/230 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH--------------RTLDKNGYM 47 R+GV+ARK+G ++ +G +I T+L + + VV + + KN Y Sbjct: 105 RTGVIARKIGQYPLWMKDGTKIRTTLLQVIDNHVVKYIPPAEFNPPLEPRQKKNWKNPYG 164 Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107 + VGA +K G F V PK+ L F V + LLP G+ + ++F VG Sbjct: 165 CLLVGAQSQDPSIFTKEYCGLFKDSGVLPKQHLCRFIVSPEAQLLP-GTPLNVTHFKVGD 223 Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167 VDV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + RV+ KM G M Sbjct: 224 YVDVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRKPGNIGAGGEKARVWPGTKMPGHM 283 Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 G ++ L++ ++ K ++ V+G N + + D+ K Sbjct: 284 GNRWRNLRGLKIWRINTKYNVMWVQGSNIAGDTNGLVYIYDTILPLRKYK 333 >gi|224045473|ref|XP_002196500.1| PREDICTED: mitochondrial ribosomal protein L3 [Taeniopygia guttata] Length = 501 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 78/221 (35%), Positives = 114/221 (51%), Gaps = 5/221 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R GVVA KLGM ++ G + VT+L + +C V+ + + +++G ++ G V Sbjct: 249 IRVGVVAVKLGMMPIWTKSGEKHAVTLLKVQDCHVLRYVSKEESGAKTAKLLVGGKNVSP 308 Query: 61 VSKPMRGF--FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 SKP F V K+K+ F V DD ++ G+ ++F GQ VDVT TIGK Sbjct: 309 FSKPESAHEIFKEAGVPRKQKVTTFNVT-DDAIIKPGTPLYAAHFRPGQFVDVTAKTIGK 367 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G MKR F G A+HG + +HR G+ + +V++ KKM G+MG T L+ Sbjct: 368 GFQGVMKRWGFKGQPASHGQTKTHRRPGAISTNK-AAKVYRGKKMPGKMGNIYRTSFGLK 426 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 V ++ K +I V G VPG N + VRDS K Sbjct: 427 VWRINTKHDIIYVNGSVPG-HTNCLVKVRDSKLPTYKDCNK 466 >gi|85110563|ref|XP_963521.1| 60S ribosomal protein L3, mitochondrial precursor [Neurospora crassa OR74A] gi|28881355|emb|CAD70397.1| related to ribosomal protein L3 precursor, mitochondrial [Neurospora crassa] gi|28925204|gb|EAA34285.1| 60S ribosomal protein L3, mitochondrial precursor [Neurospora crassa OR74A] Length = 384 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 101/218 (46%), Positives = 138/218 (63%), Gaps = 2/218 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+GV+A K GMT G RIP TVL LD QVV ++T KNGY AVQVG GE + +N Sbjct: 106 LRTGVLAVKKGMTVFMGRTGARIPCTVLQLDRVQVVANKTRAKNGYWAVQVGLGERRAEN 165 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 V P G++ + + PK+ L EF+V+ D LLPVG P +F VGQ+VDV G+T G GF Sbjct: 166 VGAPQLGYYEAKGIPPKQTLAEFKVRNQDGLLPVGVQLFPDWFHVGQVVDVRGITRGMGF 225 Query: 121 SGAMKRHNFGGLRATHGVSISHRSH-GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 +G MKRH F G A+HG S++HR+ G + RV KKM GRMG + TV+NL + Sbjct: 226 AGGMKRHGFAGQEASHGNSLNHRTIGSVGGSQGSGSRVLPGKKMPGRMGAQQHTVQNLPI 285 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 + VD++ G+++VKG V G K + + V+D+ K A + Sbjct: 286 LMVDNELGIVVVKGAVAG-HKGAVVKVQDAVKKAPPPE 322 >gi|295698649|ref|YP_003603304.1| ribosomal protein L3 [Candidatus Riesia pediculicola USDA] gi|291157291|gb|ADD79736.1| ribosomal protein L3 [Candidatus Riesia pediculicola USDA] Length = 208 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 85/208 (40%), Positives = 126/208 (60%), Gaps = 1/208 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GMT ++ G IP+TV+ ++ +V L KNGY +VQV +G K K + Sbjct: 2 IGLIGKKIGMTRIFMKNGMAIPITVIQVEENRVTQVGILKKNGYRSVQVTSGIKKHKFLK 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 GFF + V P K L EF+ ++ +G S+ + + +D++ + GKGF G Sbjct: 62 SSEIGFFKKIVVDPGKILKEFKTNATNENYHIGQKIHLSFLSKFKRIDISSFSKGKGFCG 121 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR NF A+HG S+SHR GS G Q PGRVFK KKMAG MG +VT+K LE++ + Sbjct: 122 TIKRWNFKAQDASHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGHMGNKKVTMKKLEIIQI 181 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSF 210 D+K+GLILVKG VPG N ++++ + Sbjct: 182 DEKKGLILVKGSVPGG-TNCNLIIKPTV 208 >gi|45644693|gb|AAS73081.1| predicted ribosomal protein L3 [uncultured marine gamma proteobacterium EBAC20E09] Length = 202 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 84/205 (40%), Positives = 122/205 (59%), Gaps = 3/205 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 M+ ++ +G IPVT + + V +T + NGY AV + + K+ N+SK FF Sbjct: 1 MSRLFLEDGESIPVTAISVCGNFVADIKTKENNGYNAVVL-SKSKKINNLSKSQSEFFKK 59 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 N++P L EF+V+ D D +G + F VGQ VD+TG + GKG++G +KRHNF Sbjct: 60 NNINPGS-LSEFKVENDIDTFEIGKHMTADVFEVGQFVDITGTSKGKGYAGVIKRHNFSM 118 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 ATHG S++HR+HGS G Q PGRV+K KKM+G MG + TV+NL++V +D + ++ V Sbjct: 119 QDATHGNSLAHRAHGSIGQCQTPGRVWKGKKMSGHMGNVQKTVQNLKIVELDVENNVVYV 178 Query: 192 KGCVPGAKKNSWILVRDSFKSAVNC 216 KG VPG S I ++ S K Sbjct: 179 KGAVPGFN-GSEIKIKPSHKKTKQS 202 >gi|309777133|ref|ZP_07672096.1| 50S ribosomal protein L3 [Erysipelotrichaceae bacterium 3_1_53] gi|308915003|gb|EFP60780.1| 50S ribosomal protein L3 [Erysipelotrichaceae bacterium 3_1_53] Length = 228 Score = 220 bits (562), Expect = 8e-56, Method: Composition-based stats. Identities = 79/219 (36%), Positives = 120/219 (54%), Gaps = 6/219 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RKLGMT V+ +G IPVTV+ V+ +T++ +GY AVQ+G + K + Sbjct: 2 KGILGRKLGMTQVFTEDGTLIPVTVVEACPNVVLQKKTVENDGYEAVQLGFEDVKETRST 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G + N +PK+ + E R + D L +G+ + F+ G+ VDV G + GKGF+G Sbjct: 62 KGEAGHAAKANTAPKRFVKEVRDSEFAD-LELGAEINVGIFSAGETVDVIGTSKGKGFNG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGST---GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 + R+N +HG S HR GS G G++ K MAG+ GG R T +NL V Sbjct: 121 TIVRNNAKIGPKSHG-SGHHRHIGSLATNGITSRQGKIIKGTIMAGQEGGYRTTNQNLTV 179 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 + VD + +L+KG VPG K+ ++VR + S N + Sbjct: 180 IKVDVENNYLLIKGNVPGPKRG-MVMVRTAKCSKGNTEP 217 >gi|116495947|ref|YP_807681.1| ribosomal protein L3 [Lactobacillus casei ATCC 334] gi|191639428|ref|YP_001988594.1| 50S ribosomal protein L3 [Lactobacillus casei BL23] gi|227533960|ref|ZP_03964009.1| ribosomal protein L3 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239630351|ref|ZP_04673382.1| 50S ribosomal protein L3 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301067503|ref|YP_003789526.1| 50S ribosomal protein L3 [Lactobacillus casei str. Zhang] gi|122262653|sp|Q034Y3|RL3_LACC3 RecName: Full=50S ribosomal protein L3 gi|226730526|sp|B3WAL7|RL3_LACCB RecName: Full=50S ribosomal protein L3 gi|116106097|gb|ABJ71239.1| LSU ribosomal protein L3P [Lactobacillus casei ATCC 334] gi|190713730|emb|CAQ67736.1| 50S ribosomal protein L3 [Lactobacillus casei BL23] gi|227188337|gb|EEI68404.1| ribosomal protein L3 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239527963|gb|EEQ66964.1| 50S ribosomal protein L3 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439910|gb|ADK19676.1| Ribosomal protein L3 [Lactobacillus casei str. Zhang] gi|327383517|gb|AEA54993.1| 50S ribosomal protein L3 [Lactobacillus casei LC2W] gi|327386710|gb|AEA58184.1| 50S ribosomal protein L3 [Lactobacillus casei BD-II] Length = 210 Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 119/212 (56%), Gaps = 5/212 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY AVQ+G G+ + Sbjct: 3 RKGILGKKVGMTQVFTDNGELVPVTVVDVTPNVVMQVKTVESDGYEAVQLGYGDMREVLT 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G + +PK+ + E R +GS F G +VDVTG + G G+ Sbjct: 63 NKPSVGHAKKADTTPKRFVREIR-DVALSDYEIGSEVKADEFAAGDIVDVTGTSKGHGYQ 121 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +K+ HG S HR GS G +VFK KK+ GRMG + T++NL+VV+ Sbjct: 122 GNIKKDGQSRGPMAHG-SRYHRRPGSLGAI--INKVFKGKKLPGRMGNHTRTMQNLQVVA 178 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D + ++L+KG VPGA K S++ +R + K+A Sbjct: 179 ADTEHNVLLIKGNVPGANK-SFVTIRSAVKAA 209 >gi|312375540|gb|EFR22896.1| hypothetical protein AND_14042 [Anopheles darlingi] Length = 1032 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 15/232 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN--------------GYM 47 R+GV+A+K+G ++ G +I T+L + +VV + ++ Y Sbjct: 759 RTGVIAKKIGQYPLWTRNGTKIRTTLLQIVENEVVKYIPPEEYRPAQEPRQRRNWRRPYG 818 Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107 + VGA +K G F V PK+ L F V + LP G+ + +F VG Sbjct: 819 CLLVGAENGDPSLFTKEYAGLFQHTGVLPKQHLCRFLVSPE-AQLPPGTALTVDHFRVGD 877 Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167 VDV G T+ +GF G +KRH F G+ THGV+ +HR G+ G RV+ KM G M Sbjct: 878 YVDVRGKTVDRGFQGVVKRHGFKGMPKTHGVTKTHRRPGNIGAGGQKARVWPGTKMPGHM 937 Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 G ++ L+V+ ++ + ++ V+ N + V D+ K Sbjct: 938 GNRWRVLRGLQVLRINRQYNVMWVRSSNIAGSTNGLVYVYDTVLPLRKHGAK 989 >gi|187918344|ref|YP_001883907.1| 50S ribosomal protein L3 [Borrelia hermsii DAH] gi|226725138|sp|B2S0I1|RL3_BORHD RecName: Full=50S ribosomal protein L3 gi|119861192|gb|AAX16987.1| LSU ribosomal protein L3P [Borrelia hermsii DAH] Length = 209 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 134/212 (63%), Gaps = 6/212 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V+ G +PVTV+ + ++ +T++++GY A+ +G+ + K +SK Sbjct: 3 GLIGKKVGMTQVFQGNGVVVPVTVIEFEPNYIIGKKTVERDGYDALIMGSVDLKSSKISK 62 Query: 64 PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + ++ NV PKK + EF+ K D G F + VD+TG T GKGF G Sbjct: 63 PIKGQYKNLENVEPKKYVIEFKGLKGYDA---GDEVGLDAFKEIKYVDITGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR GSTG P R FK KMAGRMGG + T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGSTGQAATPSRTFKGTKMAGRMGGEQQTIQNLEVVFI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D+++ ILVKG VPG K S+++V+ + K V Sbjct: 179 DEEKRAILVKGAVPGV-KGSFVIVKKAKKVGV 209 >gi|256370780|ref|YP_003108605.1| 50S ribosomal protein L3 [Candidatus Sulcia muelleri SMDSEM] gi|256009572|gb|ACU52932.1| 50S ribosomal subunit protein L3 [Candidatus Sulcia muelleri SMDSEM] Length = 205 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 128/207 (61%), Gaps = 5/207 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ +G ++P T++ C V+ +TL K+GY + Q+G E K+K +K Sbjct: 3 GIIGKKIGMTSFFDEKGLKVPCTIIVAGPCLVLQKKTLKKDGYNSYQIGFEEKKIKKTNK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 + G F +PKKK+ EF ++K+ L G + F +LVD+TG + GKGF G Sbjct: 63 SLLGNFKKFKSTPKKKIVEFSLKKE---LKSGDIIKVDIFNENELVDITGFSKGKGFQGV 119 Query: 124 MKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRH F G +HG +R+ GS G DP RVFK +MAGRMG +VT+K L+++ + Sbjct: 120 IKRHGFSGVGEKSHGQHNRYRAPGSIGAGSDPSRVFKGTRMAGRMGNKKVTIKKLKILKI 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDS 209 D + L+++KG VPG KNS++ ++ + Sbjct: 180 DLLKNLLIIKGSVPG-TKNSFLKIKKT 205 >gi|7674308|sp|Q9ZI50|RL3_AQUPY RecName: Full=50S ribosomal protein L3 gi|4165865|gb|AAD08785.1| ribosomal protein L3 [Aquifex pyrophilus] Length = 244 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 88/225 (39%), Positives = 128/225 (56%), Gaps = 7/225 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVK 59 M G++ K+GMT V +G IPVTV+ VV ++++ K+GY A+QVGA EAK K Sbjct: 1 MPLGLIGEKVGMTRVLLKDGTAIPVTVIKFPVNYVVQVKSVNTKDGYNALQVGAYEAKEK 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +++KP+ G F V ++L+EFRV ++ + F G LVDV G++ G+G Sbjct: 61 HLTKPLIGHFKKHGVPLLRRLWEFRVDNPEEFKSGQELRVQDVFKPGDLVDVWGISKGRG 120 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F+G MKR +F G +HG HR+ G+ G R DPGRV+K KKM G G V V+ L V Sbjct: 121 FAGVMKRWDFAGFPRSHG-HRYHRAVGAIGQRTDPGRVWKGKKMPGHYGAKPVRVQGLFV 179 Query: 180 VSVDDKRGLILVKG-CVPGAKKNSWILV----RDSFKSAVNCKGK 219 V+ + ILVKG +PG K +L+ R +++ + K K Sbjct: 180 VASLPEENAILVKGSALPGHNKGIVVLLPAVERIAYRKSQKLKQK 224 >gi|293363580|ref|ZP_06610336.1| 50S ribosomal protein L3 [Mycoplasma alligatoris A21JP2] gi|292552929|gb|EFF41683.1| 50S ribosomal protein L3 [Mycoplasma alligatoris A21JP2] Length = 277 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 81/212 (38%), Positives = 118/212 (55%), Gaps = 6/212 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT +Y G R+ VTV+ + V + DKNGY+A Q+ + K + Sbjct: 2 KGILGRKVGMTQIYTELGTRVAVTVIEVQPNVVTKVLSSDKNGYVATQLAVFDKKASRSN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ N +PK+ + E R D +G + + F VG LVDVTG + GKGF+G Sbjct: 62 KPETGHFAKANTTPKRYVKEVR---DMSGYELGQLVQANIFKVGDLVDVTGTSKGKGFAG 118 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180 +KRHN +HG + TG D +V K M G++G + TV+NLEVV Sbjct: 119 TIKRHNQHIGPKSHGGGGGSQPVRQTGSLGDIAGNKVVKGMTMPGQLGNVKTTVQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD K L+L+KG +PG KK S+++V++ K Sbjct: 179 KVDLKNNLLLIKGSIPGPKK-SFVMVKEGVKG 209 >gi|119953267|ref|YP_945476.1| 50S ribosomal protein L3 [Borrelia turicatae 91E135] gi|254803656|sp|A1QZR4|RL3_BORT9 RecName: Full=50S ribosomal protein L3 gi|119862038|gb|AAX17806.1| LSU ribosomal protein L3P [Borrelia turicatae 91E135] Length = 209 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 90/212 (42%), Positives = 133/212 (62%), Gaps = 6/212 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V+ G +PVTV+ + V+ +T++++GY A+ +G+ + + +SK Sbjct: 3 GLIGKKVGMTQVFQGNGVVVPVTVIEFEPNYVIGKKTVERDGYDALIMGSVDLRSSKISK 62 Query: 64 PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P+RG + ++ NV PK+ + EF+ K D G F + VD+TG T GKGF G Sbjct: 63 PIRGQYKNLENVEPKRYVIEFKGLKGYDA---GDEIGLDAFREIKYVDITGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRMGG + T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGEQQTIQNLEVVFI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D+++ ILVKG VPG K S+++V+ + K V Sbjct: 179 DEEKRAILVKGAVPGV-KGSFVIVKKAKKVGV 209 >gi|148377809|ref|YP_001256685.1| 50S ribosomal protein L3 [Mycoplasma agalactiae PG2] gi|226730538|sp|A5IYY6|RL3_MYCAP RecName: Full=50S ribosomal protein L3 gi|148291855|emb|CAL59245.1| 50S ribosomal protein L3 [Mycoplasma agalactiae PG2] Length = 267 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 81/212 (38%), Positives = 121/212 (57%), Gaps = 6/212 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT +Y G+RIPVTV+ + V T++KNGY A Q+ E K K V+ Sbjct: 2 KGILGRKVGMTQIYTELGQRIPVTVVEVKPNVVSKVLTVEKNGYFATQLATVEKKAKRVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 +P+ G F +PK+ + E R + +G + S F+ G+LVD+TG++ GKGF+G Sbjct: 62 RPLAGQFIQAKTTPKQYIKEIR---GMEGYELGQEVNASIFSAGELVDITGISKGKGFAG 118 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180 +KR N +HG + TG D RV K M G +G + TV+NLE+V Sbjct: 119 TIKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVVKGMTMPGHLGSEKTTVQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD L+LVKG +PGAKK S+++++ + K Sbjct: 179 KVDTVNNLLLVKGSIPGAKK-SFVIIKQAVKG 209 >gi|313897304|ref|ZP_07830848.1| 50S ribosomal protein L3 [Clostridium sp. HGF2] gi|312958025|gb|EFR39649.1| 50S ribosomal protein L3 [Clostridium sp. HGF2] Length = 228 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 79/219 (36%), Positives = 119/219 (54%), Gaps = 6/219 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RKLGMT V+ +G IPVTV+ V+ +T++ +GY AVQ+G + K + Sbjct: 2 KGILGRKLGMTQVFTEDGTLIPVTVVEACPNVVLQKKTVENDGYEAVQLGFEDVKETRST 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G + N +PK+ + E R + D L +G+ + F+ G+ VDV G + GKGF G Sbjct: 62 KGEAGHAAKANTAPKRFVKEVRDSEFAD-LELGAEVNVGIFSAGETVDVIGTSKGKGFMG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGST---GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 + R+N +HG S HR GS G G++ K MAG+ GG R T +NL V Sbjct: 121 TIVRNNAKIGPKSHG-SGHHRHIGSLATNGITSRQGKILKGTMMAGQEGGYRTTNQNLTV 179 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 + VD + +L+KG VPG K+ ++VR + S N + Sbjct: 180 IKVDVENNYLLIKGNVPGPKRG-MVMVRTAKCSKGNTEP 217 >gi|260942335|ref|XP_002615466.1| hypothetical protein CLUG_04349 [Clavispora lusitaniae ATCC 42720] gi|238850756|gb|EEQ40220.1| hypothetical protein CLUG_04349 [Clavispora lusitaniae ATCC 42720] Length = 279 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 100/210 (47%), Positives = 137/210 (65%), Gaps = 2/210 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ K M + G + TV+ +D+C+V+ +++++K+GY AV +G + K+KNV Sbjct: 61 RPGLLGIKRDMITWFTESGEQFGATVIEVDSCEVIANKSVEKDGYSAVLMGQVD-KLKNV 119 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 S+ S VSPK K EFRV+ DD ++ G+ + YF VGQLVDV ++ GKGF+ Sbjct: 120 SRYHVKLCSDAGVSPKAKFGEFRVRTDDGIISPGTEITADYFAVGQLVDVKAVSKGKGFA 179 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F GLRATHGVS+SHRS GS G QDPGRV KKMAGRMGG TV N EV+ Sbjct: 180 GVMKRHGFKGLRATHGVSVSHRSAGSMGATQDPGRVLPGKKMAGRMGGRNCTVFNNEVLH 239 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D + G+++VKG +PG K ++ V D+ K Sbjct: 240 ADGEAGILVVKGQIPGP-KGCFVKVADAKK 268 >gi|51209943|ref|YP_063607.1| ribosomal protein L3 [Gracilaria tenuistipitata var. liui] gi|68052932|sp|Q6B8V3|RK3_GRATL RecName: Full=50S ribosomal protein L3, chloroplastic gi|50657697|gb|AAT79682.1| 50S ribosomal protein L3 [Gracilaria tenuistipitata var. liui] Length = 205 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 74/201 (36%), Positives = 121/201 (60%), Gaps = 2/201 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ G++ +K+GMT +++ G+ +PVT+L L C + + ++ +GY A+Q+G + Sbjct: 1 MKIGLLGKKIGMTQIFDPGGKALPVTILKLGPCLITDIKKMESHGYAAIQIGYVKVNGNK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++K G + N+ K L E++V ++ +G + ++ Q + V+G +IGKGF Sbjct: 61 LNKAQIGHLNKYNMPLVKFLKEYKVASTEN-YQIGKWITVEDLSINQNISVSGTSIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNF +HG S +HR GS G PG+VF KKMAGRMGG +VT++NL+++ Sbjct: 120 TGCIKRHNFSRGPMSHG-SKNHRQPGSIGAGTTPGKVFAGKKMAGRMGGKKVTIQNLKII 178 Query: 181 SVDDKRGLILVKGCVPGAKKN 201 + LI+VKG VPG N Sbjct: 179 DIKINNNLIIVKGSVPGKPGN 199 >gi|167975968|ref|ZP_02558245.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195659702|gb|EDX53082.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 12 str. ATCC 33696] Length = 226 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 78/206 (37%), Positives = 113/206 (54%), Gaps = 8/206 (3%) Query: 9 KLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGF 68 K+GMT V+ G+ + TV++++ +V+ +T +K+GY A+Q+G K K ++KP+ G Sbjct: 1 KVGMTQVFTETGKAVAATVIYVEPNKVLAVKTNEKDGYNAIQIGYETVKEKALNKPLLGQ 60 Query: 69 FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128 F N PK+ + EFR D + VG+ + S F GQLV+ T G GF+G++KRHN Sbjct: 61 FKKANSDPKRHIKEFR----DVVAEVGAELTVSEFEPGQLVNAQAYTKGHGFTGSIKRHN 116 Query: 129 FGGLRATHGVSISHRSHGSTG---CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 F HG HR GS RVFK K+ G G VT KNL V+ V Sbjct: 117 FSMGPMGHGAGYPHRYVGSIAKGRGGSQAQRVFKGTKLPGHYGHELVTTKNLLVLDVKAN 176 Query: 186 RGLILVKGCVPGAKKNSWILVRDSFK 211 LIL+KG +PG K S +L++ + K Sbjct: 177 ENLILIKGAIPGP-KGSIVLLKSAKK 201 >gi|189485085|ref|YP_001956026.1| 50S ribosomal protein L3 [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|212288415|sp|B1GZ83|RL3_UNCTG RecName: Full=50S ribosomal protein L3 gi|170287044|dbj|BAG13565.1| 50S ribosomal protein L3 [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 227 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 87/212 (41%), Positives = 128/212 (60%), Gaps = 3/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ +K+GMT V++++G +PVTV+ + +C V RT++KNGY AVQ+G GE K K Sbjct: 1 MLKFIIGKKIGMTQVFDVKGNLMPVTVVEVGHCVVTDVRTVEKNGYSAVQLGFGEIKEKG 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++K FF N+S K+ L EFRV + VG F G VDV+ +T GKG+ Sbjct: 61 LNKAQAVFFKRNNLSYKRTLKEFRVSE-VAGFSVGHEIKADAFKAGDYVDVSAVTKGKGY 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KRHNFG +HG S RS GS+G Q P +V K KM+G MG VTV+ L +V Sbjct: 120 AGVIKRHNFGMQPVSHGQSDRTRSRGSSGA-QGPQKVLKGLKMSGHMGNEYVTVQKLLIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +VD ++ ++L+KG VP A + + + + K Sbjct: 179 NVDAEKNVLLIKGSVPSANRGTL-FISSTLKK 209 >gi|313678365|ref|YP_004056105.1| 50S ribosomal protein L3 [Mycoplasma bovis PG45] gi|312950290|gb|ADR24885.1| ribosomal protein L3 [Mycoplasma bovis PG45] Length = 276 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 79/212 (37%), Positives = 120/212 (56%), Gaps = 6/212 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT +Y G+RIPVTV+ + V T+++NGY+A Q+ E K K V+ Sbjct: 2 KGILGRKVGMTQIYTELGQRIPVTVVEVKPNVVTKVLTVEQNGYVATQLATVEKKAKRVN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 +P+ G F +PK+ + E R + +G + S F G+LVD+TG + GKGF+G Sbjct: 62 RPLAGQFIQAKTTPKQYIKEIRGMQG---YELGQEVNASIFEAGELVDITGTSKGKGFAG 118 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180 +KR N +HG + TG D RV K M G +G + TV+NLE+V Sbjct: 119 TIKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVVKGMTMPGHLGSEKTTVQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++LVKG +PGAKK S+++++ + K Sbjct: 179 KVDVANNILLVKGSIPGAKK-SFVIIKQAVKG 209 >gi|320108396|ref|YP_004183986.1| 50S ribosomal protein L3 [Terriglobus saanensis SP1PR4] gi|319926917|gb|ADV83992.1| 50S ribosomal protein L3 [Terriglobus saanensis SP1PR4] Length = 242 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 72/220 (32%), Positives = 118/220 (53%), Gaps = 7/220 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVKNV 61 +G++ RK+GMT V++ G P+TV+ C + +T+ K+GY A Q+G E K + Sbjct: 4 TGILGRKIGMTQVFDERGDVHPITVIKAGPCVITQLKTMQKDGYEAAQIGLVEFVKASKI 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQ---KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 +K M G F+ +V P K + E + + ++ + G F + VDV G + G+ Sbjct: 64 NKAMTGHFAKSSVPPVKIIREVPFEASAEGEEAVKSGDRVLIDIFENAKFVDVIGTSKGR 123 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF+G ++RH FGG +HG + GS G P RVF ++M G MG ++TV+NL Sbjct: 124 GFAGVIRRHGFGGGPKSHGHMF--QVQGSIGASSFPSRVFPGQRMPGHMGAAQITVRNLR 181 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 + +D + LI+V+G VPG ++ +LV + +G Sbjct: 182 IRGIDLEDNLIMVEGAVPGP-RDGVVLVSRAKAPPRERRG 220 >gi|149018712|gb|EDL77353.1| mitochondrial ribosomal protein L3 (predicted), isoform CRA_b [Rattus norvegicus] Length = 304 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 73/212 (34%), Positives = 112/212 (52%), Gaps = 7/212 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVKN 60 R G++A KLGM ++ +G++ VT+L + +C V+ + + NG A + G Sbjct: 96 RVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKTA-ALTVGGKTGSR 154 Query: 61 VSKP--MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 + KP + F+ + + PK+ + F V D+ ++ G+ ++F GQ VDVT TIGK Sbjct: 155 LYKPNSILEFYRDLGLPPKQTIKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGK 213 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G MKR F G A+HG + +HR G+ D RV+ KM G+MG TV L+ Sbjct: 214 GFQGVMKRWGFKGQPASHGQTKTHRRPGAI-STGDIARVWPGTKMPGQMGNQNRTVYGLK 272 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V V+ K +I V G VPG +N + V + Sbjct: 273 VWRVNTKHNIIYVNGSVPG-HRNCLVKVGTTV 303 >gi|325972661|ref|YP_004248852.1| 50S ribosomal protein L3 [Spirochaeta sp. Buddy] gi|324027899|gb|ADY14658.1| 50S ribosomal protein L3 [Spirochaeta sp. Buddy] Length = 206 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 90/209 (43%), Positives = 127/209 (60%), Gaps = 5/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V++ +GR PVTV+ ++ VV RT +K+GY A +G+ + K ++K Sbjct: 3 GLIGKKVGMTQVFDAQGRLTPVTVIKIEGNVVVGERTDEKHGYSAAVLGSVDKKKSTITK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F+ V PKK + EFR D L VG V F VDVTG T GKG++G Sbjct: 63 PYAGQFTDV-CEPKKHVIEFR--DFDKELTVGEVLGVDIFKDATFVDVTGTTKGKGYAGG 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KRH F G RATHG S HR G T P R FK +MAG MG R+TV+NL+VV VD Sbjct: 120 IKRHGFSGGRATHG-SKFHRDIGGTAMSSTPARTFKGHRMAGHMGNERMTVQNLKVVRVD 178 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 ++ +++VKG +PG + S ++V+ + K Sbjct: 179 EEMQVLMVKGAIPGPAQ-SVVIVKKAIKK 206 >gi|126274899|ref|XP_001387659.1| predicted protein [Scheffersomyces stipitis CBS 6054] gi|126213529|gb|EAZ63636.1| predicted protein [Pichia stipitis CBS 6054] Length = 262 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 93/210 (44%), Positives = 136/210 (64%), Gaps = 2/210 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ K GM + G + TV+ +D+C+V+ +T++ +GY +V +G + K+KNV Sbjct: 42 RPGLLGIKRGMISWFTEAGEQFAATVIEIDSCEVIKQKTVESDGYWSVLLGQID-KLKNV 100 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 ++ F + VSPK+ + EFRV+ L+PVG+ YF+VGQLVD+ ++ GKGF+ Sbjct: 101 NEKELVKFEAAGVSPKQNIGEFRVRDKSGLIPVGTELKADYFSVGQLVDIKAVSKGKGFA 160 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH F GL A+HGVS+SHRS G G QDPGRV KKMAGRMGG TV N EV+ Sbjct: 161 GVMKRHGFKGLNASHGVSLSHRSAGGMGGNQDPGRVLPGKKMAGRMGGRNCTVFNNEVLH 220 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D + G+++VKG +PG + ++ + D+ K Sbjct: 221 ADGEAGILVVKGQIPGPARG-FVKILDATK 249 >gi|330906708|ref|XP_003295571.1| hypothetical protein PTT_01689 [Pyrenophora teres f. teres 0-1] gi|311333041|gb|EFQ96334.1| hypothetical protein PTT_01689 [Pyrenophora teres f. teres 0-1] Length = 331 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 94/216 (43%), Positives = 136/216 (62%), Gaps = 4/216 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G++A K GMT +Y+ G+R TVL +D +VV H+ +KNGY AVQ+GAG+ + + Sbjct: 84 LRTGLLAIKKGMTSMYDPETGKRAACTVLQVDRNEVVAHKRREKNGYWAVQIGAGQKEAR 143 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGK 118 NV++PM G F++ VSPK+ + EF V+ + L + +G + ++FT GQ VDV G GK Sbjct: 144 NVTRPMLGHFAAAGVSPKRWVAEFEVRDEAGLQVGIGEMVGANWFTKGQFVDVKGTNKGK 203 Query: 119 GFSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 GF+G MKRH FGG A+HG S+ HR + G + RV K+M G MG TVKNL Sbjct: 204 GFAGGMKRHGFGGQPASHGQSLMHRGMGSAGGSQGSGSRVLPGKRMPGNMGNQSCTVKNL 263 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +V+ VD+ G+++V GCVPG + I V D+ Sbjct: 264 KVLQVDEANGIVVVNGCVPGPN-DQIIRVSDALGKP 298 >gi|73667228|ref|YP_303244.1| 50S ribosomal protein L3 [Ehrlichia canis str. Jake] gi|109893428|sp|Q3YRK9|RL3_EHRCJ RecName: Full=50S ribosomal protein L3 gi|72394369|gb|AAZ68646.1| LSU ribosomal protein L3P [Ehrlichia canis str. Jake] Length = 231 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 102/215 (47%), Positives = 147/215 (68%), Gaps = 5/215 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+ K+G T +++ EG+RIPVT+LHL + ++ +T D NGY AV +G N+ Sbjct: 4 RIGLFLEKVGHTAIFDNEGKRIPVTLLHLRDSFIISTKTKDINGYNAVVLGVE--SSVNI 61 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP N++ K ++FE RV D ++ G+ S ++F Q +DVTG ++GKGF+ Sbjct: 62 KKPQLKILEKSNITAKCRIFESRVDNLDGIVK-GAKISITHFVENQYIDVTGYSLGKGFA 120 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF GL+A+HGVSI+HRS GSTG QDPGRV+K KKMAG +G ++VTV+NL+V+ Sbjct: 121 GVMKRHNFKGLKASHGVSIAHRSQGSTGQCQDPGRVYKGKKMAGHLGSSKVTVQNLKVIL 180 Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVN 215 VD +R L++VKG +PGA K S++ V+D+ K +V Sbjct: 181 VDQERSLLVVKGNNIPGA-KGSYVFVKDAVKKSVP 214 >gi|118602213|ref|YP_903428.1| 50S ribosomal protein L3P [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|226730558|sp|A1AVK0|RL3_RUTMC RecName: Full=50S ribosomal protein L3 gi|118567152|gb|ABL01957.1| LSU ribosomal protein L3P [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 238 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 94/225 (41%), Positives = 138/225 (61%), Gaps = 11/225 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG------ 54 M G+V +K+GMT + + +G PV+V+ ++ ++V +T+D NGY A+QV G Sbjct: 1 MAMGLVGQKIGMTRLISDDGSITPVSVIKIELNRIVQTKTVDTNGYSAIQVTTGVKVNKK 60 Query: 55 -EAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113 EAKV V ++G ++ + L+EFRV+ D+ + + S F+ G V+V G Sbjct: 61 GEAKVHRVPAAIKGHYAKTSQEIGLGLWEFRVEADE--ITDATSVDISLFSAGHYVNVVG 118 Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 + GKGF G +KRHNF ATHG SISHR+ GSTG Q+PGRVFK KKMAG MG +VT Sbjct: 119 RSKGKGFQGGVKRHNFQMQDATHGNSISHRAIGSTGQCQEPGRVFKGKKMAGHMGNEQVT 178 Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVR-DSFKSAVNCK 217 + L++V VD +R +I VKG +PGA K ++ + S K+ +N + Sbjct: 179 QECLKIVKVDSERNIIFVKGSIPGATKG-FVKISLSSKKNKINQE 222 >gi|56417003|ref|YP_154077.1| 50S ribosomal protein L3 [Anaplasma marginale str. St. Maries] gi|222475371|ref|YP_002563788.1| 50S ribosomal protein L3 (rplC) [Anaplasma marginale str. Florida] gi|254995180|ref|ZP_05277370.1| 50S ribosomal protein L3 [Anaplasma marginale str. Mississippi] gi|255003354|ref|ZP_05278318.1| 50S ribosomal protein L3 [Anaplasma marginale str. Puerto Rico] gi|255004478|ref|ZP_05279279.1| 50S ribosomal protein L3 [Anaplasma marginale str. Virginia] gi|56388235|gb|AAV86822.1| 50S ribosomal protein L3 [Anaplasma marginale str. St. Maries] gi|222419509|gb|ACM49532.1| 50S ribosomal protein L3 (rplC) [Anaplasma marginale str. Florida] Length = 232 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 106/220 (48%), Positives = 138/220 (62%), Gaps = 5/220 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ +K+G T V+ G R+PVT+L L++ VV ++ D +GY AV +G + + Sbjct: 6 RVGLLMKKVGSTAVFGDAGARVPVTLLLLEDTFVVDVKSRDVHGYNAVVLGV--RRPGRL 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP + LFE RV D + P G V +F GQ VDV G +IG+GF+ Sbjct: 64 NKPQICALRKKGIDVDCHLFESRVDTVDGVEPGGRVL-VDHFFQGQFVDVAGRSIGRGFA 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNFGGLRA+HGVSISHRS GSTG QDPGRVFK KKMAG MG V+NL VV Sbjct: 123 GVMKRHNFGGLRASHGVSISHRSQGSTGQCQDPGRVFKGKKMAGHMGHTMSVVQNLRVVL 182 Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCKGKV 220 VD +R L++V+G VPG S++LVRD+ K V +G V Sbjct: 183 VDSERSLLVVEGTNVPGPC-GSYVLVRDAVKKPVPREGGV 221 >gi|325108615|ref|YP_004269683.1| 50S ribosomal protein L3P [Planctomyces brasiliensis DSM 5305] gi|324968883|gb|ADY59661.1| LSU ribosomal protein L3P [Planctomyces brasiliensis DSM 5305] Length = 231 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 89/230 (38%), Positives = 125/230 (54%), Gaps = 20/230 (8%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT VY G +PVTVL + C V+ RTLD++GY AVQ+G G+ + Sbjct: 1 MPVGLLGRKVGMTQVYEEGGVVVPVTVLEVGPCPVLQVRTLDRDGYEAVQLGFGDKPRRL 60 Query: 61 VSKPMRGFFS-------------------SVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS 101 ++ RG + + P++ + EFR + + VG V + Sbjct: 61 ATRGERGHVAEISSKRRKARQEAGVELLAKADCEPQRYVREFRTDGESLDIEVGKVLTVE 120 Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F VDV + G+G +G MKRHNF G RA+HGV HR+ GS G DP RV K Sbjct: 121 QFAEISNVDVVATSKGRGTAGVMKRHNFAGQRASHGVKKVHRAPGSIGQSADPSRVLKGT 180 Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 +MAG+ G RVTV+NL+V + + L+LVKG VPG ++LVR + K Sbjct: 181 RMAGQYGNARVTVRNLKVARIVAEENLLLVKGAVPGPS-GGYVLVRPTNK 229 >gi|226321110|ref|ZP_03796652.1| ribosomal protein L3 [Borrelia burgdorferi 29805] gi|226233520|gb|EEH32259.1| ribosomal protein L3 [Borrelia burgdorferi 29805] gi|312149724|gb|ADQ29795.1| ribosomal protein L3 [Borrelia burgdorferi N40] Length = 206 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 91/209 (43%), Positives = 129/209 (61%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ G IPVTV+ ++ +T+D++GY A+ G+ + K VSK Sbjct: 3 GLIGKKVGMTQIFQKNGIVIPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKVSK 62 Query: 64 PMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + S ++ PK+ + E K D G F + VDVTG T GKGF G Sbjct: 63 PIKGQYKSLKDIEPKRYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D+++ +LVKG VPGA K S+++V+ S K Sbjct: 179 DEEKRALLVKGAVPGA-KGSFVVVKKSKK 206 >gi|219685094|ref|ZP_03539914.1| ribosomal protein L3 [Borrelia garinii Far04] gi|219673190|gb|EED30209.1| ribosomal protein L3 [Borrelia garinii Far04] Length = 206 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 93/209 (44%), Positives = 128/209 (61%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ G IPVTV+ ++ +T+D++GY A+ G+ + K VSK Sbjct: 3 GLIGKKVGMTQIFQKNGIVIPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKDSKVSK 62 Query: 64 PMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + S ++ PKK + E K D G F + VDVTG T GKGF G Sbjct: 63 PIKGQYKSLKDIEPKKYVIEL---KGLDGYDPGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNKQTIQNLEVVLI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D++ ILVKG VPGA K S+++V+ S K Sbjct: 179 DEENRAILVKGAVPGA-KGSFVVVKKSKK 206 >gi|312212003|emb|CBX92087.1| similar to 50S ribosomal protein L3 [Leptosphaeria maculans] Length = 328 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 104/219 (47%), Positives = 138/219 (63%), Gaps = 4/219 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G++A K GMT +Y+ G+R TVL LD +V+ H+ DKNGY AVQVGAGE K Sbjct: 82 LRTGLLANKKGMTAMYDPETGKRTACTVLQLDRNEVIAHKRRDKNGYWAVQVGAGEKLPK 141 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGK 118 NV+KPM G F+ VSPK+ + EF+V+ + L +PVGS+ +F VGQ VDV G++ G Sbjct: 142 NVTKPMLGHFAGAAVSPKRWVAEFKVRDEAGLGVPVGSMVGAGWFNVGQWVDVKGISRGM 201 Query: 119 GFSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 GF+G MKRH FGG A+HG S+ HR + G + RV K+MAG MG VTVKNL Sbjct: 202 GFAGGMKRHGFGGQPASHGQSLMHRGMGSAGGSQGSGSRVLPGKRMAGNMGNESVTVKNL 261 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 +V+ VD G+++V G VPG KN I V D+ Sbjct: 262 KVLQVDAANGILVVTGAVPGP-KNQIIRVSDARDKPWPA 299 >gi|326922075|ref|XP_003207277.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like [Meleagris gallopavo] Length = 348 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 76/221 (34%), Positives = 112/221 (50%), Gaps = 5/221 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG--YMAVQVGAGEAKV 58 +R GVVA KLGM ++ G++ VT+L + +C V+ + + + +G + VG Sbjct: 96 VRVGVVAVKLGMMPIWTKSGKKHAVTLLKVQDCHVLKYISKEDSGGKRAKLLVGGKNVSP 155 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 S+ F V K+K+ F V DD ++ G+ ++F GQ+VDVT TIGK Sbjct: 156 FFKSEAEMEIFREAGVPRKQKVTSFDVT-DDAIIKPGTPLYAAHFRPGQIVDVTAKTIGK 214 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G +KR F G A+HG + +HR G+ + RVF KKM G+MG T L+ Sbjct: 215 GFQGVVKRWGFKGQPASHGQTKTHRRPGAISTNK-VSRVFPGKKMPGKMGNIYRTSFALK 273 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 V ++ K +I V G VPG N + VRD+ K Sbjct: 274 VWRINTKHDIIYVHGSVPG-HTNCLVKVRDTKLRVYKDCNK 313 >gi|240047259|ref|YP_002960647.1| 50S ribosomal protein L3 [Mycoplasma conjunctivae HRC/581] gi|239984831|emb|CAT04821.1| 50S ribosomal protein L3 [Mycoplasma conjunctivae] Length = 225 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 75/213 (35%), Positives = 116/213 (54%), Gaps = 6/213 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GMT ++ G IPVTV+ + V T +KN Y A+Q+ + K + Sbjct: 2 KGILGKKVGMTQLFTDHGIAIPVTVIEVQPNIVTNVLTQEKNSYDAIQLSVFDKKASRFN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F N +PKK + EFR + D G V S F G+ VDV G + GKGF+G Sbjct: 62 KPELGHFQKANTTPKKFVKEFR---NFDGYKSGDVVDLSIFEAGEFVDVVGTSKGKGFAG 118 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180 +KR+N +HG + TG D +V K M G +G RVT++NLE++ Sbjct: 119 TIKRYNQAIGPRSHGGGGGSKPIRQTGSIGDISGNKVVKGMTMPGHLGHERVTLQNLEII 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + +++VKG +PG KK S+++++ + K + Sbjct: 179 KVDVENSILVVKGSIPGPKK-SFVIIKSASKRS 210 >gi|15594823|ref|NP_212612.1| 50S ribosomal protein L3 [Borrelia burgdorferi B31] gi|195941615|ref|ZP_03086997.1| 50S ribosomal protein L3 [Borrelia burgdorferi 80a] gi|216264833|ref|ZP_03436825.1| ribosomal protein L3 [Borrelia burgdorferi 156a] gi|218249534|ref|YP_002374988.1| ribosomal protein L3 [Borrelia burgdorferi ZS7] gi|221218185|ref|ZP_03589651.1| ribosomal protein L3 [Borrelia burgdorferi 72a] gi|223888933|ref|ZP_03623524.1| ribosomal protein L3 [Borrelia burgdorferi 64b] gi|224532529|ref|ZP_03673154.1| ribosomal protein L3 [Borrelia burgdorferi WI91-23] gi|224533652|ref|ZP_03674241.1| ribosomal protein L3 [Borrelia burgdorferi CA-11.2a] gi|225549667|ref|ZP_03770633.1| ribosomal protein L3 [Borrelia burgdorferi 118a] gi|226321788|ref|ZP_03797314.1| ribosomal protein L3 [Borrelia burgdorferi Bol26] gi|226725136|sp|B7J243|RL3_BORBZ RecName: Full=50S ribosomal protein L3 gi|2688413|gb|AAC66864.1| ribosomal protein L3 (rplC) [Borrelia burgdorferi B31] gi|215981306|gb|EEC22113.1| ribosomal protein L3 [Borrelia burgdorferi 156a] gi|218164722|gb|ACK74783.1| ribosomal protein L3 [Borrelia burgdorferi ZS7] gi|221192133|gb|EEE18354.1| ribosomal protein L3 [Borrelia burgdorferi 72a] gi|223885749|gb|EEF56848.1| ribosomal protein L3 [Borrelia burgdorferi 64b] gi|224512601|gb|EEF82977.1| ribosomal protein L3 [Borrelia burgdorferi WI91-23] gi|224513325|gb|EEF83687.1| ribosomal protein L3 [Borrelia burgdorferi CA-11.2a] gi|225369944|gb|EEG99391.1| ribosomal protein L3 [Borrelia burgdorferi 118a] gi|226232977|gb|EEH31730.1| ribosomal protein L3 [Borrelia burgdorferi Bol26] gi|312148184|gb|ADQ30843.1| ribosomal protein L3 [Borrelia burgdorferi JD1] Length = 206 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 90/209 (43%), Positives = 129/209 (61%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ G +PVTV+ ++ +T+D++GY A+ G+ + K VSK Sbjct: 3 GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKVSK 62 Query: 64 PMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + S ++ PK+ + E K D G F + VDVTG T GKGF G Sbjct: 63 PIKGQYKSLKDIEPKRYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D+++ +LVKG VPGA K S+++V+ S K Sbjct: 179 DEEKRALLVKGAVPGA-KGSFVVVKKSKK 206 >gi|269958584|ref|YP_003328371.1| 50S ribosomal protein L3 [Anaplasma centrale str. Israel] gi|269848413|gb|ACZ49057.1| 50S ribosomal protein L3 [Anaplasma centrale str. Israel] Length = 232 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 106/220 (48%), Positives = 138/220 (62%), Gaps = 5/220 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ +K+G T V+ G R+PVT+L L++ VV + D +GY AV +G + + Sbjct: 6 RVGLLMKKIGNTAVFGDSGARVPVTLLLLEDTLVVEVKRRDVHGYDAVVLGV--RRPGRL 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP + LFE RV D + P GS S +F GQ VDV G +IG+GF+ Sbjct: 64 NKPQVCALRKKGIDVDCHLFESRVDAVDGIEP-GSRISVDHFFQGQFVDVAGRSIGRGFA 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF GLRA+HGVSISHRS GSTG QDPGRVFK KKMAG MG + V+NL VV Sbjct: 123 GVMKRHNFRGLRASHGVSISHRSQGSTGQCQDPGRVFKGKKMAGHMGCSMSVVQNLRVVL 182 Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCKGKV 220 VD +R L++V+G VPG+ S++LVRD+ K V G V Sbjct: 183 VDSERSLLVVEGTNVPGSC-GSYVLVRDAVKKPVPGGGNV 221 >gi|319411891|emb|CBQ73934.1| related to MRPL9-mitochondrial ribosomal protein, large subunit [Sporisorium reilianum] Length = 378 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 101/218 (46%), Positives = 131/218 (60%), Gaps = 7/218 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG----YMAVQVGAGEAK 57 R G++A K GMT + G RIP TVL + QV H + Y A+QV A + K Sbjct: 97 RVGLIAVKRGMTSFFLPNGERIPATVLQVHTNQVSAHIGFGPDATESTYTALQVAAVDTK 156 Query: 58 VKN-VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116 N V+K +RG + +S KK+ D L+P+G+ S +F GQ +DV +T Sbjct: 157 SINLVTKQIRGHLKTAGISRGKKIIREFRVSSDALVPLGTQLSAVHFVPGQSIDVRAITR 216 Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV-TVK 175 G GF G MKRH F GLRA+HGVSISHRSHGSTG QDPGRV+ KMAGRMGGN+ ++ Sbjct: 217 GHGFQGVMKRHGFHGLRASHGVSISHRSHGSTGANQDPGRVWPGTKMAGRMGGNKHGSIH 276 Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 NL VV VD K+ LI VKG VPG K + ++D+ + + Sbjct: 277 NLLVVRVDAKKDLIYVKGNVPGP-KGGNVTLQDARRPS 313 >gi|42524375|ref|NP_969755.1| 50S ribosomal protein L3 [Bdellovibrio bacteriovorus HD100] gi|81829166|sp|Q6MJ15|RL3_BDEBA RecName: Full=50S ribosomal protein L3 gi|39576584|emb|CAE80748.1| 50S ribosomal protein L3 [Bdellovibrio bacteriovorus HD100] Length = 220 Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 77/205 (37%), Positives = 107/205 (52%), Gaps = 1/205 (0%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+ A K GM +YN G +PVTVL + V +T + +GY A+QV K KN +K Sbjct: 17 GLFAFKEGMATIYNENGEAVPVTVLRYEPWFVSQIKTNEADGYEAIQVACHPKKAKNSNK 76 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 +G + + Q + VG+ S G V +T + GKGF+G+ Sbjct: 77 AEKGHLEKAGFENGAQFVKELRQAAPEGTVVGAQISIDSLAKGDFVKITSKSKGKGFAGS 136 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KR F G A+HG S HR GS+G R PGRV KK G +G VTVKN+EVV + Sbjct: 137 VKRWGFAGGPASHG-SKFHRRPGSSGNRTWPGRVMPGKKFPGHLGAETVTVKNVEVVQII 195 Query: 184 DKRGLILVKGCVPGAKKNSWILVRD 208 + +++VKG VPGA+ LVR+ Sbjct: 196 AEENVLMVKGPVPGARNTLVKLVRE 220 >gi|203284388|ref|YP_002222128.1| 50S ribosomal protein L3 [Borrelia duttonii Ly] gi|203287922|ref|YP_002222937.1| 50S ribosomal protein L3 [Borrelia recurrentis A1] gi|226725137|sp|B5RM36|RL3_BORDL RecName: Full=50S ribosomal protein L3 gi|226725139|sp|B5RPI2|RL3_BORRA RecName: Full=50S ribosomal protein L3 gi|201083831|gb|ACH93422.1| 50S ribosomal protein L3 [Borrelia duttonii Ly] gi|201085142|gb|ACH94716.1| 50S ribosomal protein L3 [Borrelia recurrentis A1] Length = 209 Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 87/212 (41%), Positives = 132/212 (62%), Gaps = 6/212 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V+ G +PVTV+ + V+ +T++++GY A+ +G+ + K VS+ Sbjct: 3 GLIGKKVGMTQVFQSNGIVVPVTVIEFEPNYVIGKKTMERDGYDALIMGSVDLKGSKVSR 62 Query: 64 PMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + + N+ PK+ + EF+ K D G F + VD+TG T GKGF G Sbjct: 63 PIKGQYKKLENIEPKRYVIEFKGLKGYDA---GDEVGLDAFREIKYVDITGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRMGG + T++NLE+V + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGEQQTIQNLEIVFI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 D+++ ILVKG VPG K S+++V+ + K + Sbjct: 179 DEEKRAILVKGAVPGV-KGSFVIVKKAKKVGI 209 >gi|189195810|ref|XP_001934243.1| 50S ribosomal protein L3 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187980122|gb|EDU46748.1| 50S ribosomal protein L3 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 332 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 94/216 (43%), Positives = 136/216 (62%), Gaps = 4/216 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G++A K GMT +Y+ G+R TVL +D +VV H+ +KNGY AVQ+GAG+ + + Sbjct: 84 LRTGLLAIKKGMTSMYDPETGKRAACTVLQVDRNEVVAHKRREKNGYWAVQIGAGQKEAR 143 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGK 118 NV++PM G F++ VSPK+ + EF V+ + L + +G + ++FT GQ VDV G GK Sbjct: 144 NVTRPMLGHFAAAGVSPKRWVAEFEVRDEAGLQVGIGEMVGANWFTQGQFVDVKGTNKGK 203 Query: 119 GFSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 GF+G MKRH FGG A+HG S+ HR + G + RV K+M G MG TVKNL Sbjct: 204 GFAGGMKRHGFGGQPASHGQSLMHRGMGSAGGSQGSGSRVLPGKRMPGNMGNQSCTVKNL 263 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +V+ VD+ G+++V GCVPG + I V D+ Sbjct: 264 KVLQVDEANGIVVVGGCVPGPN-DQIIRVSDALGKP 298 >gi|254796647|ref|YP_003081483.1| ribosomal protein L3 [Neorickettsia risticii str. Illinois] gi|254589884|gb|ACT69246.1| ribosomal protein L3 [Neorickettsia risticii str. Illinois] Length = 210 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 97/212 (45%), Positives = 132/212 (62%), Gaps = 7/212 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ +K+G T VY+ +PVT+L L+ V+ +++G + +V G K + Sbjct: 3 RVGLLLKKVGCTSVYDDRSSLVPVTLLQLEENVVLSA--EERDGVVVTRVSFGTRK---L 57 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP + + + ++ EFRV P+GS + +F GQ VD G +IGKGF+ Sbjct: 58 KKPQLAYLRKLGLEKGGRVVEFRVSPRFVPEPLGS-LTVEHFRPGQYVDAVGTSIGKGFA 116 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF GLRA+HGVSISHRS GSTG QDPG+VFK KKMAG MG RVT++NL V Sbjct: 117 GVMKRHNFAGLRASHGVSISHRSGGSTGQCQDPGKVFKGKKMAGHMGNARVTMQNLLVQL 176 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + LI V+G VPG KNS++L+RD+ K Sbjct: 177 VDVENCLIGVRGSVPGC-KNSYVLLRDALKKG 207 >gi|320538165|ref|ZP_08038060.1| 50S ribosomal protein L3 [Treponema phagedenis F0421] gi|320144982|gb|EFW36703.1| 50S ribosomal protein L3 [Treponema phagedenis F0421] Length = 207 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 88/210 (41%), Positives = 127/210 (60%), Gaps = 6/210 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GMT V+N +G +PVTV+ ++ VV + +K GY AV +G GE K K+ + Sbjct: 2 VGLIGKKIGMTQVFNEQGHLMPVTVIQVEPNTVVALKDEEKFGYSAVVLGLGEMKEKHAA 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F ++ P K L EFR D + VG + +DVT ++ GKGF G Sbjct: 62 KPYAGQF--ADMKPVKLLKEFRGF--DKEVSVGEKIGVEILDTTRYLDVTAVSKGKGFQG 117 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR FGG RA+HG S HR GSTG PGR FKN KM GRMG +VTV+NL + + Sbjct: 118 VVKRWGFGGGRASHG-SKFHREAGSTGQCTSPGRSFKNVKMPGRMGAEKVTVQNLRIEKI 176 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D + G+++V+G VPG KK++ + ++ + K Sbjct: 177 DPEMGVVMVRGSVPG-KKDATVFLKSAVKR 205 >gi|193216762|ref|YP_002000004.1| 50S ribosomal protein L3 [Mycoplasma arthritidis 158L3-1] gi|226730537|sp|B3PMP8|RL3_MYCA5 RecName: Full=50S ribosomal protein L3 gi|193002085|gb|ACF07300.1| ribosomal protein L3 [Mycoplasma arthritidis 158L3-1] Length = 272 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 68/218 (31%), Positives = 116/218 (53%), Gaps = 6/218 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT ++ EG IPVT++ + V T++K+GY A Q+ + K + Sbjct: 2 KGILGRKVGMTQLFTNEGILIPVTIVEVKPNVVTKVLTVEKDGYSATQLATEDKKASQIR 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 +P F N +PK+ + E R + +G S F G++VDVT ++ GKGF+G Sbjct: 62 RPEINKFKQANTTPKRFVKEIR---NMTGYSLGDTIDASLFQAGEIVDVTAISKGKGFAG 118 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180 +KR N +HG + TG D RV+K M G +G +VT++NLE+V Sbjct: 119 TIKRWNQHIGPKSHGGGGGSQPLRQTGSIGDISGNRVWKGMTMPGHLGSEQVTIQNLEIV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 D ++++KG +PGA K + ++++ + K++ + Sbjct: 179 KEDPANNMLVIKGSIPGA-KGALVVIKKAIKTSHKKEA 215 >gi|158296418|ref|XP_316827.4| AGAP000857-PA [Anopheles gambiae str. PEST] gi|157015287|gb|EAA12062.4| AGAP000857-PA [Anopheles gambiae str. PEST] Length = 373 Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats. Identities = 64/232 (27%), Positives = 111/232 (47%), Gaps = 15/232 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN--------------GYM 47 R+GV+A+K+G ++ +G++I T+L + + +VV + ++ Y Sbjct: 100 RTGVIAKKIGQYPLWTKDGQKIRTTLLQIVDNEVVKYIPPEEYRPAQEPRQSRNWRKPYG 159 Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107 + VGA +K G F V PKK L F V + LP G+ + S+F VG Sbjct: 160 CLLVGAEHGDPSLFTKEYAGLFHESGVLPKKHLCRFIVSPE-AQLPSGTALTVSHFRVGD 218 Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167 VDV G+T+ +GF G +KRH F G+ +HGV+ +HR G+ G + RV+ ++ G M Sbjct: 219 FVDVRGLTVDRGFQGVVKRHGFKGMPKSHGVTKTHRRPGNIGAGGNKARVWPGTRLPGHM 278 Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 G ++ L ++ ++ + ++ V G N + + D+ K Sbjct: 279 GNRWRVLRGLRILRINPQYNVMWVMGSNIAGNTNGIVYIYDTILPLRRHGAK 330 >gi|206896345|ref|YP_002247334.1| ribosomal protein L3 [Coprothermobacter proteolyticus DSM 5265] gi|206738962|gb|ACI18040.1| ribosomal protein L3 [Coprothermobacter proteolyticus DSM 5265] Length = 219 Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats. Identities = 76/208 (36%), Positives = 114/208 (54%), Gaps = 3/208 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GM+ + +G IPVT++ VV + D G +V +G K K ++ Sbjct: 4 IGLLGKKIGMSRFIDEKGVFIPVTLIKAGPNYVVNVK-KDSKGRESVALGFEVVKEKALN 62 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121 KP G V P + + EFR + VG + F G+LVDV G + G+GF+ Sbjct: 63 KPQLGVLKKAGVPPVRFVREFRYPGISEKFEVGQEVNVADVFADGELVDVIGTSKGRGFA 122 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 GAMKR F G THG HR G+ G R PG V KKM+G G ++VTV+NL++V Sbjct: 123 GAMKRWGFAGGPKTHGTRGWHRRVGAIGNRTYPGEVKPGKKMSGHYGNSQVTVRNLKIVK 182 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209 V ++ +I VKG VPG+ +N ++ +R + Sbjct: 183 VIPEQNIIAVKGSVPGS-RNGFVCIRKA 209 >gi|189501654|ref|YP_001957371.1| 50S ribosomal protein L3 [Candidatus Amoebophilus asiaticus 5a2] gi|226725126|sp|B3EUM3|RL3_AMOA5 RecName: Full=50S ribosomal protein L3 gi|189497095|gb|ACE05642.1| hypothetical protein Aasi_0197 [Candidatus Amoebophilus asiaticus 5a2] Length = 210 Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats. Identities = 78/208 (37%), Positives = 117/208 (56%), Gaps = 4/208 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +KLGMT +Y+ GR +P TV+ C V + ++K+GY AVQ+G + K KN K Sbjct: 3 GIIGKKLGMTTLYDEAGRSVPCTVITGGPCVVTQIKNIEKDGYTAVQLGYDDKKEKNTVK 62 Query: 64 PMRGFFSSVNVSPKKKLFEF--RVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGF 120 P+ G F +PK+KL EF ++ + +G F G+ VD G++ GKGF Sbjct: 63 PLMGHFQKAQTTPKRKLVEFKEFGKELGKEIQLGQTIQLHDIFVEGEYVDAIGLSKGKGF 122 Query: 121 SGAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 G +KRH F G +HG R+ G+ G P RVFK +MAGR GG RV + NL + Sbjct: 123 QGVVKRHGFSGVGGKSHGQHNRERAPGAIGACSTPSRVFKGMRMAGRTGGQRVKITNLRI 182 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVR 207 + + ++ ++++ G VPGAK IL + Sbjct: 183 MKLVPEKNILVISGSVPGAKNGYIILEK 210 >gi|255994807|ref|ZP_05427942.1| 50S ribosomal protein L3 [Eubacterium saphenum ATCC 49989] gi|255993520|gb|EEU03609.1| 50S ribosomal protein L3 [Eubacterium saphenum ATCC 49989] Length = 315 Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats. Identities = 80/217 (36%), Positives = 115/217 (52%), Gaps = 3/217 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 + +K GMT ++ +G IPVTV+ +VV +T +GY AV+V E K ++KP Sbjct: 14 IFGKKAGMTQIFTEDGVSIPVTVIEAYPAKVVQIKTQATDGYDAVKVAYIETKEHRINKP 73 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +G +K+ EF + + VG V + S + G VDVTG + GKG +G + Sbjct: 74 KKGELDKAKAGAMRKMAEFTPENGVE-YKVGDVITVSELSEGNKVDVTGTSKGKGTAGNI 132 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KRH +HG S R G+ PGRVFK K G MG +VTV+NL++V + + Sbjct: 133 KRHGHRRGPMSHG-SKHKRLAGALAGAAYPGRVFKGNKGPGHMGDEQVTVQNLDLVKLIE 191 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 R ++LVKG VPG KK ++V S KS GK + Sbjct: 192 DRNVLLVKGAVPG-KKGGEVMVTYSKKSEYVLSGKAA 227 >gi|225548727|ref|ZP_03769774.1| ribosomal protein L3 [Borrelia burgdorferi 94a] gi|225370757|gb|EEH00193.1| ribosomal protein L3 [Borrelia burgdorferi 94a] Length = 206 Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats. Identities = 90/209 (43%), Positives = 129/209 (61%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ G +PVTV+ ++ +T+D++GY A+ G+ + K VSK Sbjct: 3 GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKVSK 62 Query: 64 PMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + S ++ PK+ + E K D G F + VDVTG T GKGF G Sbjct: 63 PIKGQYKSLKDIEPKRCVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D+++ +LVKG VPGA K S+++V+ S K Sbjct: 179 DEEKRALLVKGAVPGA-KGSFVVVKKSKK 206 >gi|153004713|ref|YP_001379038.1| 50S ribosomal protein L3 [Anaeromyxobacter sp. Fw109-5] gi|166233114|sp|A7HBF8|RL3_ANADF RecName: Full=50S ribosomal protein L3 gi|152028286|gb|ABS26054.1| ribosomal protein L3 [Anaeromyxobacter sp. Fw109-5] Length = 236 Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats. Identities = 83/224 (37%), Positives = 119/224 (53%), Gaps = 8/224 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58 M +G++A+KLGMT ++ EG IPVTVL C VV +T +K+GY AV +G GE Sbjct: 1 MATGLLAKKLGMTQIFTAEGDCIPVTVLEAGPCTVVRRKTAEKDGYDAVVIGWGEVDEKH 60 Query: 59 -KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPS-YFTVGQLVDVTGM 114 ++KP G F + + E RV+ L G V + F Q +DV G+ Sbjct: 61 AHRLTKPEVGVFKKAGTPVFRHVKEIRVKDAKLLGELKAGDVLTVDKVFKQDQRIDVAGV 120 Query: 115 TIGKGFSGAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 T G+GF+G MKR N G R + HR G+ G R+ PG+V+K K + G G + VT Sbjct: 121 TKGRGFTGVMKRWNMHGAARDSSTTHEHHRHVGAIGQRKTPGKVWKGKHLPGHYGVDNVT 180 Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 ++NL +V V+ + L+LVKG VPG + + V + K K Sbjct: 181 IQNLTIVGVEADKNLLLVKGAVPG-HNDGLLFVNTAVKGQPRVK 223 >gi|241957878|ref|XP_002421658.1| 60s ribosomal protein, mitochondrial precursor, putative [Candida dubliniensis CD36] gi|223645003|emb|CAX39595.1| 60s ribosomal protein, mitochondrial precursor, putative [Candida dubliniensis CD36] Length = 293 Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats. Identities = 101/220 (45%), Positives = 134/220 (60%), Gaps = 6/220 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+ A K GM +N +G IP TVL +D+C+V+ ++ GY AV +G + Sbjct: 67 RPGLFAIKRGMITWFNEKGEHIPATVLEVDSCEVLGYKLFRDFGYTAVIMGTIDKLKNVK 126 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD-----LLPVGSVFSPSYFTVGQLVDVTGMTI 116 S F + VSPK+K+ EF+++ D+ L+PVG+ + YFTVGQ VDV G+T Sbjct: 127 STNDLRIFETAKVSPKQKIGEFKIRSIDNDIESKLIPVGTELTADYFTVGQKVDVKGITK 186 Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 GKGF+G MKR F G RATHG S +HR+ G+TG Q+PGRVF KKM GRMG T N Sbjct: 187 GKGFAGVMKRWGFSGGRATHGTSKAHRTPGATGGNQNPGRVFPGKKMPGRMGNRNNTGFN 246 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 LEV+ D + G+++VKG VPG KK S I V D+ K N Sbjct: 247 LEVLHTDGEAGILIVKGNVPGPKK-SIIKVYDAIKEYGNS 285 >gi|313123111|ref|YP_004033370.1| 50S ribosomal protein l3 [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279674|gb|ADQ60393.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 198 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 112/202 (55%), Gaps = 5/202 (2%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT ++ +G +PVTV+ V+ +T++ +GY AVQ+G + + +KP +G Sbjct: 1 MTQIFTKDGVLVPVTVIEATPNVVMQVKTVENDGYEAVQLGYQDKREVLSNKPEKGHADK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 SPK+ + E R + D VGS + F G +V+VTG + G G+ G +KRH+ Sbjct: 61 AKTSPKRFIRELRGVELSD-YEVGSEVTVETFKEGDVVNVTGTSRGHGYQGNIKRHHQSR 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 THG S HR GS G RV K KK+ G MG VT++NL V V + ++++ Sbjct: 120 GPETHG-SRYHRIPGSMGSI--INRVPKGKKLPGHMGVKTVTIENLVVEKVVADKNVLMI 176 Query: 192 KGCVPGAKKNSWILVRDSFKSA 213 KG VPGA KNS I+V+ S K++ Sbjct: 177 KGNVPGA-KNSLIVVKSSAKAS 197 >gi|304373190|ref|YP_003856399.1| 50S ribosomal protein L3 [Mycoplasma hyorhinis HUB-1] gi|304309381|gb|ADM21861.1| 50S ribosomal protein L3 [Mycoplasma hyorhinis HUB-1] gi|330723950|gb|AEC46320.1| 50S ribosomal protein L3 [Mycoplasma hyorhinis MCLD] Length = 231 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 78/221 (35%), Positives = 118/221 (53%), Gaps = 9/221 (4%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GMT ++ EG IPVTV+ + V T DKNGY A+Q+ A + K + Sbjct: 2 KGILGKKVGMTQLFTEEGISIPVTVVEVQPNVVTNVLTKDKNGYEAIQLAAFDKKKSRFT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F + PK+ + EFR + +G S F G+ VDV G + GKGF+G Sbjct: 62 KPELGHFKKADTEPKRFVKEFR----NMQAELGQKVDLSIFEEGEFVDVVGTSKGKGFAG 117 Query: 123 AMKRHNFGGLRATHGVSISH---RSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 +KR+N +HG R GS G +V K M G +G R TV+NLE+ Sbjct: 118 TIKRYNQHIGPKSHGGGGGSKPIRQTGSIGDISG-NKVVKGMTMPGHLGHERTTVQNLEI 176 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220 + +D ++++KG VPG KK S++++++S K A +V Sbjct: 177 IKIDLTNNILVIKGSVPGPKK-SFLVIKESVKQAPKKAAEV 216 >gi|226329480|ref|ZP_03804998.1| hypothetical protein PROPEN_03389 [Proteus penneri ATCC 35198] gi|225202666|gb|EEG85020.1| hypothetical protein PROPEN_03389 [Proteus penneri ATCC 35198] Length = 181 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 85/181 (46%), Positives = 113/181 (62%), Gaps = 2/181 (1%) Query: 32 NCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL 91 N +V R L+K+GY A+QV G K V KP G F+ V + L EFR+ + ++ Sbjct: 3 NNRVTQVRDLEKDGYRAIQVTTGSKKANRVLKPEAGHFAKAGVEAGRLLREFRLNEGEE- 61 Query: 92 LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151 VG S F + VDVTG + GKGF+G +KR NF ATHG S+SHR GS G Sbjct: 62 YTVGQSISVEIFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQN 121 Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 Q PG+VFK KKMAG++G +VTV++LEVV VD +R L+LVKG VPGA S ++V+ + K Sbjct: 122 QTPGKVFKGKKMAGQLGNEQVTVQSLEVVRVDAERNLLLVKGAVPGA-TGSDLIVKPAVK 180 Query: 212 S 212 + Sbjct: 181 A 181 >gi|156363345|ref|XP_001626005.1| predicted protein [Nematostella vectensis] gi|156212865|gb|EDO33905.1| predicted protein [Nematostella vectensis] Length = 264 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 82/220 (37%), Positives = 122/220 (55%), Gaps = 7/220 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG----YMAVQVGAGEAK 57 R+G V KLGM+ ++ +GRR+PVT++ + +C+VV R +G +QVGA Sbjct: 8 RTGAVGVKLGMSALWLKDGRRLPVTLIQIKDCEVVQARVAKGHGGRDPQTELQVGAVNKL 67 Query: 58 VKN-VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116 N + K G F +V PK+K+ F V D L P G+ + ++F GQ V + G+T Sbjct: 68 ELNQIGKAQFGHFKRFSVRPKRKVCSFPVTPDALLTP-GTPITAAHFYPGQYVKIQGVTK 126 Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 KGF G MKR GG A+HG S +HR G+TG QDPGRV+ KKMAG MG T+ Sbjct: 127 DKGFQGVMKRWGMGGQPASHGQSKTHRKMGATGGGQDPGRVWPGKKMAGHMGNKNCTLHA 186 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 + V ++ K ++ V+G PG ++ + D++K + Sbjct: 187 VRVHRINTKYNVLYVQGQCPGP-TGGFLKISDAWKRHPHA 225 >gi|302842094|ref|XP_002952591.1| plastid/chloroplast ribosomal protein L3 [Volvox carteri f. nagariensis] gi|300262230|gb|EFJ46438.1| plastid/chloroplast ribosomal protein L3 [Volvox carteri f. nagariensis] Length = 259 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 81/216 (37%), Positives = 110/216 (50%), Gaps = 6/216 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDN-CQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ K GM + G +P TV+ L+ V +T D +GY AVQVG + V+ Sbjct: 45 GVLGTKAGMMSYFTENGLCVPATVIALEEGNVVTQVKTEDTDGYNAVQVGYKAVAERKVT 104 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPS-YFTVGQLVDVTGMTIGKG 119 KP G V P + L EF+++ + G S G+ VD+ G+T+GKG Sbjct: 105 KPELGHLKKAGVQPMRHLVEFKLKDRATVESYQPGQELDVSSLLKEGEAVDIAGVTVGKG 164 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR + THG S SHR HGS G P RVF KMAG+MG R TVKN + Sbjct: 165 FQGTIKRWHHKRGAMTHG-SKSHREHGSIGSATTPSRVFPGLKMAGQMGNVRATVKNQTL 223 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 + VD +R ++VKG VPG N + + + VN Sbjct: 224 LKVDSERRALIVKGSVPGKVGN-VVEITPAKLVGVN 258 >gi|51598732|ref|YP_072920.1| 50S ribosomal protein L3 [Borrelia garinii PBi] gi|81825630|sp|Q661E3|RL3_BORGA RecName: Full=50S ribosomal protein L3 gi|51573303|gb|AAU07328.1| ribosomal protein L3 [Borrelia garinii PBi] Length = 206 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 93/209 (44%), Positives = 128/209 (61%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ G IPVTV+ ++ +T+D++GY A+ G+ + K VSK Sbjct: 3 GLIGKKVGMTQIFQKNGIVIPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKVSK 62 Query: 64 PMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + S ++ PKK + E K D G F + VDVTG T GKGF G Sbjct: 63 PIKGQYKSLKDIEPKKYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNKQTIQNLEVVLI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D++ ILVKG VPGA K S+++V+ S K Sbjct: 179 DEENRAILVKGAVPGA-KGSFVVVKKSKK 206 >gi|219684396|ref|ZP_03539340.1| ribosomal protein L3 [Borrelia garinii PBr] gi|219672385|gb|EED29438.1| ribosomal protein L3 [Borrelia garinii PBr] Length = 206 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 92/209 (44%), Positives = 128/209 (61%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ G IPVTV+ ++ +T+D++GY A+ G+ + K VSK Sbjct: 3 GLIGKKVGMTQIFQKNGIVIPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKVSK 62 Query: 64 PMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + S ++ P+K + E K D G F + VDVTG T GKGF G Sbjct: 63 PIKGQYKSLKDIEPQKYVIEL---KGLDGYDPGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNKQTIQNLEVVLI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D++ ILVKG VPGA K S+++V+ S K Sbjct: 179 DEENRAILVKGAVPGA-KGSFVVVKKSKK 206 >gi|225552448|ref|ZP_03773388.1| ribosomal protein L3 [Borrelia sp. SV1] gi|225371446|gb|EEH00876.1| ribosomal protein L3 [Borrelia sp. SV1] Length = 206 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 89/209 (42%), Positives = 128/209 (61%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ G +PVTV+ ++ +T+D++GY A+ G+ + K VSK Sbjct: 3 GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKVSK 62 Query: 64 PMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + ++ PK+ + E K D G F + VDVTG T GKGF G Sbjct: 63 PIKGQYKGLKDIEPKRYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D+++ +LVKG VPGA K S+++V+ S K Sbjct: 179 DEEKRALLVKGAVPGA-KGSFVVVKKSKK 206 >gi|57530745|ref|NP_001006366.1| 39S ribosomal protein L3, mitochondrial [Gallus gallus] gi|53128932|emb|CAG31347.1| hypothetical protein RCJMB04_5e20 [Gallus gallus] Length = 348 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 78/221 (35%), Positives = 114/221 (51%), Gaps = 5/221 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG-YMA-VQVGAGEAKV 58 +R GVVA KLGM ++ G++ VT+L + +C V+ + + + +G A + VG Sbjct: 96 VRVGVVAVKLGMMPIWTKSGKKHAVTLLKVQDCHVLKYVSKEDSGGKTAKLLVGGKNVSP 155 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 + S+ F V K+K+ F V DD ++ G+ ++F GQ+VDVT TIGK Sbjct: 156 FSKSEAEMEIFREAGVPRKQKVTTFNVT-DDAIIKPGTPLYAAHFRPGQIVDVTAKTIGK 214 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G MKR F G A+HG + +HR G+ + RVF KKM G+MG T L+ Sbjct: 215 GFQGVMKRWGFKGQPASHGQTKTHRRPGAISTNK-VSRVFPGKKMPGKMGNIYRTSFGLK 273 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 V ++ K +I V G VPG N + VRD+ K Sbjct: 274 VWRINTKHDIIYVHGSVPG-HTNCLVKVRDTKLRVYKDCNK 313 >gi|3915827|sp|P94267|RL3_BORBU RecName: Full=50S ribosomal protein L3 Length = 206 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 89/209 (42%), Positives = 128/209 (61%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ G +PVTV+ ++ +T+D++GY A+ G+ + K VSK Sbjct: 3 GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKVSK 62 Query: 64 PMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + S ++ PK+ + E K D G F + VDVTG T GKGF G Sbjct: 63 PIKGQYKSLKDIEPKRYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRM GN+ T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMAGNQQTIQNLEVVLI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D+++ +LVKG VPGA K S+++V+ S K Sbjct: 179 DEEKRALLVKGAVPGA-KGSFVVVKKSKK 206 >gi|224531994|ref|ZP_03672626.1| ribosomal protein L3 [Borrelia valaisiana VS116] gi|224511459|gb|EEF81865.1| ribosomal protein L3 [Borrelia valaisiana VS116] Length = 206 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 94/209 (44%), Positives = 129/209 (61%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT V+ G +PVTV+ ++ +T+D++GY A+ G+ + K VSK Sbjct: 3 GLIGKKVGMTQVFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKVSK 62 Query: 64 PMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + S ++ PKK + E K D G F + VDVTG T GKGF G Sbjct: 63 PIKGQYKSLKDIEPKKYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D++R ILVKG VPGA K S+++V+ S K Sbjct: 179 DEERRAILVKGAVPGA-KGSFVVVKKSKK 206 >gi|323342789|ref|ZP_08083021.1| 50S ribosomal protein L3 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463901|gb|EFY09095.1| 50S ribosomal protein L3 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 230 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 72/219 (32%), Positives = 117/219 (53%), Gaps = 5/219 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RKLGMT V+ +G+ IPV+V+ + V+ +T++ + Y AVQ+GA + K + + Sbjct: 2 KGLLGRKLGMTQVFTTDGKLIPVSVVEVLPNVVLQKKTMESDNYEAVQLGAFDVKEQRAN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K + + +PKK + E + + VG+ F+ G+ VDVTG + G GF G Sbjct: 62 KSEIAHAAKASTAPKKFVREIAGSEMMN-FEVGAEIKADLFSEGEYVDVTGTSRGHGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 ++ R N HG S HR GS +P + K + + G+ GG T + LEV+ Sbjct: 121 SIVRANQKIGPKAHG-SGFHRGVGSLATGGLNPAVIKKGRILPGQHGGYTTTNQKLEVIK 179 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220 VD + +L+KG +PG KK +++V+ + K V K V Sbjct: 180 VDTESNYLLIKGNIPGPKKG-FVIVKSTVKR-VKSKDPV 216 >gi|216263354|ref|ZP_03435349.1| ribosomal protein L3 [Borrelia afzelii ACA-1] gi|215980198|gb|EEC21019.1| ribosomal protein L3 [Borrelia afzelii ACA-1] Length = 206 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 92/209 (44%), Positives = 129/209 (61%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ G +PVTV+ ++ +T+D++GY A+ G+ + K VSK Sbjct: 3 GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKVSK 62 Query: 64 PMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + S ++ PKK + E K D G F + VDVTG T GKGF G Sbjct: 63 PIKGQYKSLKDIEPKKYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D+++ ILVKG VPGA K S+++V+ S K Sbjct: 179 DEEKRAILVKGAVPGA-KGSFVVVKKSKK 206 >gi|224534796|ref|ZP_03675368.1| ribosomal protein L3 [Borrelia spielmanii A14S] gi|224514044|gb|EEF84366.1| ribosomal protein L3 [Borrelia spielmanii A14S] Length = 206 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 92/209 (44%), Positives = 129/209 (61%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ G +PVT++ ++ +T+D++GY A+ G+ + K VSK Sbjct: 3 GLIGKKVGMTQIFQKNGIVVPVTIIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKVSK 62 Query: 64 PMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + S ++ PKK + E K D G F + VDVTG T GKGF G Sbjct: 63 PIKGQYKSLKDIEPKKYVIEL---KGLDGYDAGDEIKVDVFKSVRYVDVTGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G A+HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV + Sbjct: 120 AMKRHNFSGGPASHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D+++ ILVKG VPGA K S+++V+ S K Sbjct: 179 DEEKRAILVKGAVPGA-KGSFVVVKKSKK 206 >gi|283794897|ref|YP_003359250.1| ribosomal protein L3 [Cryptomonas paramecium] gi|253981869|gb|ACT46786.1| ribosomal protein L3 [Cryptomonas paramecium] Length = 210 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 86/206 (41%), Positives = 121/206 (58%), Gaps = 3/206 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ K+GMT V++ G IP T++ + C V +T+ K GY ++Q+G + Sbjct: 3 MNFGILGTKVGMTNVFDPSGVAIPGTIVKVGPCIVTQVKTVPKEGYSSIQLGYFSVAKAS 62 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +SKP G N + L EFRV D+ L +G + S F+VG V V G ++GKGF Sbjct: 63 LSKPELGHLKISNSQAVRYLREFRVDSPDENL-LGQEVTVSKFSVGDRVSVAGKSVGKGF 121 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 SG +KRH+F THG S +HR GS G PGRVF K+MAGR+GG +VT+KNL VV Sbjct: 122 SGTVKRHHFTRGPMTHG-SKNHREPGSIGMGTTPGRVFPGKRMAGRLGGKKVTIKNLRVV 180 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206 V + +++KG VPG KK S + + Sbjct: 181 FVSLENNFLVLKGSVPG-KKGSLLRI 205 >gi|255639119|gb|ACU19859.1| unknown [Glycine max] Length = 264 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 81/209 (38%), Positives = 113/209 (54%), Gaps = 3/209 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 GV+ KLGM + +G +PVTV+ + V +T +GY AVQVG + + + Sbjct: 49 IGVMGTKLGMMSYFESDGEVVPVTVVGFKEGNIVTQIKTEATDGYDAVQVGYRRVRDRKL 108 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G V P + L EFR+Q D + F G LVDV+G TIGKGF Sbjct: 109 TKPEMGHLHKVGAIPMRHLQEFRLQAIDGFDLNQRLLFDETFKEGDLVDVSGTTIGKGFQ 168 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNF THG S SHR GS G PGRV+K KKM GRMGG + ++ L++V Sbjct: 169 GGIKRHNFKRGPMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVK 227 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 +D ++++KG +PG N + + + Sbjct: 228 IDKDLNVLMIKGALPGKPGN-LLRITPAK 255 >gi|94968254|ref|YP_590302.1| 50S ribosomal protein L3 [Candidatus Koribacter versatilis Ellin345] gi|123381602|sp|Q1ISC2|RL3_ACIBL RecName: Full=50S ribosomal protein L3 gi|94550304|gb|ABF40228.1| LSU ribosomal protein L3P [Candidatus Koribacter versatilis Ellin345] Length = 244 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 78/226 (34%), Positives = 122/226 (53%), Gaps = 11/226 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVK 59 M +G++ +K+GMT +++ +G PVTVL C + +T +K+GY A QVG E K Sbjct: 1 MINGLIGKKIGMTQLFDSKGDVRPVTVLQAGPCVITQRKTANKDGYDAAQVGLVEFVKET 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKD-------DDLLPVGSVFSPSYFTVGQLVDVT 112 ++K G ++ P + L EF + D + + VG F + VDVT Sbjct: 61 RLTKAQLGHLGKNDLPPVRTLHEFAIVADGPSEAESNGEVKVGDKVLVDLFEGSKFVDVT 120 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++ G+GF+G +KRH F G +HG + GS G P RVFK +MAG MG ++V Sbjct: 121 GVSKGRGFAGVVKRHKFAGGARSHGSMF--QISGSIGSSAFPSRVFKGMRMAGHMGQDQV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 TV+NL ++ +D L++V+G VPG K++ + + S K +G Sbjct: 179 TVRNLRILGIDKDENLLVVEGAVPGP-KDATVFITMSKKPPRERRG 223 >gi|159485314|ref|XP_001700690.1| plastid ribosomal protein L3 [Chlamydomonas reinhardtii] gi|158272032|gb|EDO97839.1| plastid ribosomal protein L3 [Chlamydomonas reinhardtii] Length = 259 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 79/218 (36%), Positives = 112/218 (51%), Gaps = 6/218 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDN-CQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 GV+ K GM + +G +P TV+ L+ V +T D +GY AVQ+G K Sbjct: 43 AMGVLGTKAGMMSYFTEDGLCVPATVIALEEGNVVTQVKTQDTDGYNAVQIGYKATAEKR 102 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPS-YFTVGQLVDVTGMTIG 117 V+KP G V P + L EF+++ + G + G+ VD+ G+T+G Sbjct: 103 VTKPELGHLKKAGVPPMRHLVEFKLKDRAAVEAYQPGQALDVAALLKEGEPVDIAGITVG 162 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF G +KR + +HG S SHR HGS G P RVF KMAG+MG R+TVKN Sbjct: 163 KGFQGTIKRWHHKRGAMSHG-SKSHREHGSIGSATTPSRVFPGLKMAGQMGNVRMTVKNQ 221 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++ VD +R ++VKG VPG N + + + VN Sbjct: 222 SLLKVDTERHALVVKGSVPGKVGN-VVEITPAKLVGVN 258 >gi|116780926|gb|ABK21883.1| unknown [Picea sitchensis] Length = 303 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 81/209 (38%), Positives = 112/209 (53%), Gaps = 3/209 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 GV+ KLGM + G+ +PVTV+ + V +T +GY AVQVG + K + Sbjct: 88 VGVMGTKLGMMSYFEPGGKFVPVTVVGFHEGNIVTQIKTEATDGYEAVQVGYRRVRDKKL 147 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G + V P + L EFR+ D + F G LVDV+G +IGKGF Sbjct: 148 TKPEMGHLNKVGTIPMRHLQEFRLTSVDGFELSQRLTFEELFKEGDLVDVSGKSIGKGFQ 207 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNF +HG S SHR GS G PGRV+ KKM GRMGG + ++ L+VV Sbjct: 208 GGIKRHNFRRGPMSHG-SKSHRQLGSIGAGTTPGRVYPGKKMPGRMGGTKTKIRKLQVVK 266 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 +D + +L+KG VPG N + + + Sbjct: 267 IDSELRTVLIKGAVPGKPGN-LLRITPAK 294 >gi|72080533|ref|YP_287591.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae 7448] gi|109893525|sp|Q4A8H1|RL3_MYCH7 RecName: Full=50S ribosomal protein L3 gi|71913657|gb|AAZ53568.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae 7448] Length = 230 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 77/221 (34%), Positives = 121/221 (54%), Gaps = 7/221 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GM+ ++ EG IPV+++ + V T +KN Y A+Q+ A + K Sbjct: 2 KGILGKKVGMSQLFTTEGIAIPVSIIEVPENIVTKIITKEKNSYNAIQLAAFDKKQSRFL 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ N PK+ + EFR D +G S F+ G+ VDVTG + GKGF+G Sbjct: 62 KPEIGHFAKANTKPKRFIKEFR---DFQGYKLGQTVDVSIFSPGEFVDVTGTSKGKGFAG 118 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180 +KR+N +HG + TG D +V K M GR+G +VT ++LE++ Sbjct: 119 TIKRYNQAIGPRSHGGGGGSKPIRQTGSLGDISGNKVVKGMTMPGRLGHEKVTKQSLEII 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 VD + L+++KG VPG KK S+++++ + K N K VS Sbjct: 179 KVDKENNLLVLKGSVPGPKK-SFLVIKSAIKKP-NPKNPVS 217 >gi|71893546|ref|YP_278992.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae J] gi|109893526|sp|Q4AAE0|RL3_MYCHJ RecName: Full=50S ribosomal protein L3 gi|71851673|gb|AAZ44281.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae J] Length = 230 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 77/221 (34%), Positives = 121/221 (54%), Gaps = 7/221 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GM+ ++ EG IPV+++ + V T +KN Y A+Q+ A + K Sbjct: 2 KGILGKKVGMSQLFTTEGIAIPVSIIEVPENIVTKIITKEKNSYDAIQLAAFDKKQSRFL 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ N PK+ + EFR D +G S F+ G+ VDVTG + GKGF+G Sbjct: 62 KPEIGHFAKANTKPKRFIKEFR---DFQGYKLGQTVDVSIFSPGEFVDVTGTSKGKGFAG 118 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180 +KR+N +HG + TG D +V K M GR+G +VT ++LE++ Sbjct: 119 TIKRYNQAIGPRSHGGGGGSKPIRQTGSLGDISGNKVVKGMTMPGRLGHEKVTKQSLEII 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 VD + L+++KG VPG KK S+++++ + K N K VS Sbjct: 179 KVDKENNLLVLKGSVPGPKK-SFLVIKSAIKKP-NPKNPVS 217 >gi|187251822|ref|YP_001876304.1| 50S ribosomal protein L3 [Elusimicrobium minutum Pei191] gi|186971982|gb|ACC98967.1| Ribosomal protein L3 [Elusimicrobium minutum Pei191] Length = 259 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 84/217 (38%), Positives = 120/217 (55%), Gaps = 3/217 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 V+ K+GMT +++ +G V+V+ C+VV RT +K+GY AV +G GE K K ++KP Sbjct: 32 VLGEKMGMTQLFDEKGNLHAVSVVKAGPCKVVRVRTQEKDGYTAVCLGFGEVKEKALNKP 91 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGA 123 GFF +P + + E RV D VG V S F G VDV G G+GF+GA Sbjct: 92 ELGFFKKTTQAPVRHMKEHRVS-DVTGFEVGQVVSLDKIFKPGDYVDVQGKIKGRGFAGA 150 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G A+HG S R+ G R+ G+V ++MAG G TV +EV+ VD Sbjct: 151 MKRHGFAGQPASHGASDRERAPGGLASRRSLGKVLSGQRMAGHYGNTTQTVAKIEVIKVD 210 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220 + LI +KG VPGA K + + V ++ K+ + + Sbjct: 211 SENNLIFLKGSVPGA-KGTIVSVLETSKTRKHIVAPI 246 >gi|119484833|ref|ZP_01619315.1| 50S ribosomal protein L3 [Lyngbya sp. PCC 8106] gi|119457651|gb|EAW38775.1| 50S ribosomal protein L3 [Lyngbya sp. PCC 8106] Length = 218 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 79/215 (36%), Positives = 110/215 (51%), Gaps = 20/215 (9%) Query: 12 MTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK----------- 59 MT V++ G IPVTV+ C V +T +GY A+Q+G GE K K Sbjct: 1 MTQVFDAESGIAIPVTVIEAGPCIVTQIKTESTDGYTAIQLGYGEVKNKTRKLNTVKSPG 60 Query: 60 -----NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGM 114 +S +G + + L E+R+ +D +G F GQLVDV+G+ Sbjct: 61 KEVNKYLSNAEQGHLAKSGGQLVRHLREYRI-EDTSSYELGQELKADLFEPGQLVDVSGI 119 Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 ++G+GFSG KRHNF HG S +HR GS G PGRV+ KKMAGR GG ++T Sbjct: 120 SMGRGFSGFQKRHNFRRGPMAHG-SKNHRQPGSIGPGTTPGRVYPGKKMAGRYGGKKITT 178 Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 L VV +D +R L+L+KG VPG + + + Sbjct: 179 SKLIVVRIDPERNLLLIKGAVPGKP-GGLLNITPA 212 >gi|170064762|ref|XP_001867661.1| mitochondrial 39S ribosomal protein L3 [Culex quinquefasciatus] gi|167882034|gb|EDS45417.1| mitochondrial 39S ribosomal protein L3 [Culex quinquefasciatus] Length = 371 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 67/230 (29%), Positives = 111/230 (48%), Gaps = 15/230 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH--------------RTLDKNGYM 47 R+GV+A+K+G ++ +G +I T+L + + VV + + KN Y Sbjct: 104 RTGVIAKKIGQYPLWRKDGTKIRTTLLQIIDNHVVKYIPPEEFEPPREPNQKRNWKNPYG 163 Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107 + VGA +K G F V PK+ L F + + +LP G+ + ++F VG Sbjct: 164 CLLVGAESRDPSIFTKEYCGLFKDSGVIPKQHLCRFIISPEARILP-GTPLNVTHFRVGD 222 Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167 VDV G T+ GF G +KRH+F G+ A+HGV+ +HR G+ G RV+ KM G M Sbjct: 223 FVDVRGKTVDHGFQGVVKRHSFKGMPASHGVTKTHRRPGNIGAGGAKARVWPGTKMPGHM 282 Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 G ++ L++ ++ K ++ V+G N + + D+ K Sbjct: 283 GNRWRNLRGLKIWRINTKYNVMWVQGSNIAGDTNGLVYIYDTILPLRKYK 332 >gi|68474538|ref|XP_718642.1| likely mitochondrial ribosomal protein (E. coli L3) [Candida albicans SC5314] gi|46440421|gb|EAK99727.1| likely mitochondrial ribosomal protein (E. coli L3) [Candida albicans SC5314] Length = 293 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 100/220 (45%), Positives = 134/220 (60%), Gaps = 6/220 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+ A K GM +N +G IP TVL +D+C+V+ ++ GY AV +G + Sbjct: 66 RPGLFAIKRGMITWFNEKGEHIPATVLEVDSCEVLGYKLFKDFGYTAVIMGTIDKLKNVK 125 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD-----LLPVGSVFSPSYFTVGQLVDVTGMTI 116 S F + VSPK+K+ EF+++ D+ L+PVG+ + YF+VGQ VDV G+T Sbjct: 126 STNDLRIFETAKVSPKQKIGEFKIRSIDNDIESKLIPVGTELTADYFSVGQKVDVKGVTK 185 Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 GKGF+G MKR F G RATHG S +HR+ G+TG Q+PGRVF KKM GRMG T N Sbjct: 186 GKGFAGVMKRWGFSGGRATHGTSKAHRTPGATGGNQNPGRVFPGKKMPGRMGHQNNTGFN 245 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 LEV+ D + G+++VKG VPG KK S I V D+ K N Sbjct: 246 LEVLHTDGEAGILIVKGNVPGPKK-SIIKVSDAIKEYGNS 284 >gi|33236514|gb|AAP98602.1| ribosomal protein L3 [Chlamydophila pneumoniae TW-183] Length = 235 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 76/218 (34%), Positives = 113/218 (51%), Gaps = 11/218 (5%) Query: 1 MR--SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58 MR V+ +K GM +++ +G + +V+ ++ V +T + +GY ++Q+GA E Sbjct: 17 MRSHISVMGKKEGMIHIFDKDGSLVACSVIRVEPNVVTQIKTKESDGYFSLQIGAEEMNA 76 Query: 59 K------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111 VSKP G + L E R ++ + + +G F F VDV Sbjct: 77 PAHTITKRVSKPKLGHLRKAGGRVFRFLKEVRGSEEALNGVSLGDAFGLEVFEDVSSVDV 136 Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171 G++ GKGF G MK+ F G +HG S HR GS G R PGR F K MG Sbjct: 137 RGISKGKGFQGVMKKFGFRGGPGSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGAEN 195 Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VTVKNLEV+ VD ++ ++LVKG +PGA + S ++V+ S Sbjct: 196 VTVKNLEVIKVDLEKKVLLVKGAIPGA-RGSIVIVKHS 232 >gi|238879545|gb|EEQ43183.1| conserved hypothetical protein [Candida albicans WO-1] Length = 293 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 100/220 (45%), Positives = 134/220 (60%), Gaps = 6/220 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+ A K GM +N +G IP TVL +D+C+V+ ++ GY AV +G + Sbjct: 66 RPGLFAIKRGMITWFNEKGEHIPATVLEVDSCEVLGYKLFKDFGYTAVIMGTIDKLKNVK 125 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD-----LLPVGSVFSPSYFTVGQLVDVTGMTI 116 S F + VSPK+K+ EF+++ D+ L+PVG+ + YF+VGQ VDV G+T Sbjct: 126 STNDLRIFETAKVSPKQKIGEFKIRSIDNDIESKLIPVGTELTADYFSVGQKVDVKGVTK 185 Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 GKGF+G MKR F G RATHG S +HR+ G+TG Q+PGRVF KKM GRMG T N Sbjct: 186 GKGFAGVMKRWGFSGGRATHGTSKAHRTPGATGGNQNPGRVFPGKKMPGRMGHQNNTGFN 245 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 LEV+ D + G+++VKG VPG KK S I V D+ K N Sbjct: 246 LEVLHTDGEAGILIVKGNVPGPKK-SIIKVSDAIKEYGNS 284 >gi|1685371|gb|AAB36822.1| ribosomal protein L3 [Borrelia burgdorferi] Length = 206 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 89/209 (42%), Positives = 128/209 (61%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ G +PVTV+ ++ +T+D++GY A+ G+ + K VSK Sbjct: 3 GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKVSK 62 Query: 64 PMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + S ++ PK+ + E K D G F + VDVTG T GKGF G Sbjct: 63 PIKGQYKSLKDIEPKRYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRM GN+ T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMAGNQQTIQNLEVVLI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 D+++ +LVKG VPGA K S+++V+ S K Sbjct: 179 DEEKRALLVKGPVPGA-KGSFVVVKKSKK 206 >gi|307194194|gb|EFN76611.1| 39S ribosomal protein L3, mitochondrial [Harpegnathos saltator] Length = 348 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 70/230 (30%), Positives = 118/230 (51%), Gaps = 16/230 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN----GYMAVQ------- 50 R+G++A+K+G+ ++ +G ++ T+L + + +VV + ++ G +Q Sbjct: 81 RTGLIAKKIGVYPLWLKDGTKVYSTLLQVVDNEVVKYIPPEEFYPVIGKKPIQIKRRLGC 140 Query: 51 --VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQL 108 VGAG + V+K G F V PK L F + + L P G+ ++F G++ Sbjct: 141 LVVGAGNINPQLVTKEYSGIFKDSGVMPKLVLRRFIISPEAALQP-GTPLFATHFKPGEV 199 Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168 VD+ G TI +GF G MKR F G+ ATHGV+ +HR G+ G RV KM G MG Sbjct: 200 VDIRGKTIDRGFQGVMKRWGFKGMPATHGVTKTHRRPGNIGSGGQKARVMPGTKMPGHMG 259 Query: 169 GNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217 +K +E++ ++ K ++ VKG +PG + N++ + D+ K Sbjct: 260 NRWRILKGVEILRINTKYNVLWVKGHNIPG-ETNNYCYIYDTILPLKKSK 308 >gi|111115307|ref|YP_709925.1| 50S ribosomal protein L3 [Borrelia afzelii PKo] gi|123341335|sp|Q0SN29|RL3_BORAP RecName: Full=50S ribosomal protein L3 gi|110890581|gb|ABH01749.1| ribosomal protein L3 [Borrelia afzelii PKo] Length = 206 Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats. Identities = 91/209 (43%), Positives = 129/209 (61%), Gaps = 6/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++ G +PVTV+ ++ +T+D++GY A+ G+ + K VSK Sbjct: 3 GLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKVSK 62 Query: 64 PMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P++G + S ++ PKK + E K D G F + VDVTG T GKGF G Sbjct: 63 PIKGQYKSLKDIEPKKYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 AMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV + Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLI 178 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211 ++++ ILVKG VPGA K S+++V+ S K Sbjct: 179 NEEKRAILVKGAVPGA-KGSFVVVKKSKK 206 >gi|47459070|ref|YP_015932.1| 50S ribosomal protein L3 [Mycoplasma mobile 163K] gi|81828477|sp|Q6KI55|RL3_MYCMO RecName: Full=50S ribosomal protein L3 gi|47458399|gb|AAT27721.1| 50S ribosomal protein l3 [Mycoplasma mobile 163K] Length = 297 Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats. Identities = 77/218 (35%), Positives = 122/218 (55%), Gaps = 6/218 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GMT +Y +G ++PVTV+ + V K+GY+A+Q+GA + K + Sbjct: 2 KGILGQKIGMTQIYTAQGNKVPVTVIEVKPNVVTHKFENTKDGYVALQLGAFDQKERKFK 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F N +PK+ + E R + D +G + F G+LVDVTG++ GKGF+G Sbjct: 62 KPEIGHFKKSNTTPKRFVKEIR---NMDGYNLGDLVKADIFKSGELVDVTGISKGKGFAG 118 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180 +KRHN +HG + TG D +V K M G +G + T++NLEVV Sbjct: 119 TIKRHNQKIGPKSHGGGGGSKPVRQTGSIGDIAGNKVLKGMTMPGHLGNVQRTIQNLEVV 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 VD K ++LVKG VPG KN +++++ + K+ + + Sbjct: 179 KVDIKNNILLVKGSVPGP-KNCFLIIKSAIKNLPSREA 215 >gi|58579302|ref|YP_197514.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Welgevonden] gi|58417928|emb|CAI27132.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Welgevonden] Length = 236 Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats. Identities = 102/215 (47%), Positives = 145/215 (67%), Gaps = 5/215 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ K+G + +++ EG+RIPVT+LHL + VV + D +GY +V G N+ Sbjct: 9 RIGLLLEKVGHSAIFDNEGKRIPVTLLHLRDSFVVSIKDKDSHGYTSVV--FGMKVSTNM 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP N++ K+FE RV D+ L VG+ ++F Q VD+TG ++GKGF+ Sbjct: 67 KKPQLKILQKSNINVNCKIFESRVDHIDN-LTVGAKVLITHFVENQYVDITGCSLGKGFA 125 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF GL+A+HGVSISHRS GSTG QDPGRV+K KKMAG +G +RVTV+N++V+S Sbjct: 126 GVMKRHNFKGLKASHGVSISHRSQGSTGQCQDPGRVYKGKKMAGHLGNSRVTVQNIKVIS 185 Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVN 215 VD ++ L++VKG +PGA+ S++ VRD+ K V Sbjct: 186 VDKEKSLLVVKGNNIPGAQ-GSYLFVRDAIKKPVP 219 >gi|197122296|ref|YP_002134247.1| 50S ribosomal protein L3 [Anaeromyxobacter sp. K] gi|220917078|ref|YP_002492382.1| ribosomal protein L3 [Anaeromyxobacter dehalogenans 2CP-1] gi|226725127|sp|B4UAM2|RL3_ANASK RecName: Full=50S ribosomal protein L3 gi|254803648|sp|B8J817|RL3_ANAD2 RecName: Full=50S ribosomal protein L3 gi|196172145|gb|ACG73118.1| ribosomal protein L3 [Anaeromyxobacter sp. K] gi|219954932|gb|ACL65316.1| ribosomal protein L3 [Anaeromyxobacter dehalogenans 2CP-1] Length = 236 Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats. Identities = 82/226 (36%), Positives = 121/226 (53%), Gaps = 8/226 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG---EAK 57 M +G++A+K+GMT ++ EG +PVTVL C VV +T +K+GY AV +G G E Sbjct: 1 MSTGLLAKKVGMTQIFTPEGDCVPVTVLEAGPCTVVRRKTAEKDGYDAVVIGFGVVDEKH 60 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPS-YFTVGQLVDVTGM 114 +SKP G F + + E RV+ L L G V + F Q +DV G+ Sbjct: 61 AHRLSKPEVGVFKKAGTPIFRHVKEIRVKDAKQLGDLKAGDVLTVDKVFKANQRIDVAGV 120 Query: 115 TIGKGFSGAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 T G+GF+G MKR N G R + HR G+ G R+ PG+V+K K + G G + VT Sbjct: 121 TKGRGFTGVMKRWNMKGAARDSSTAHEHHRHVGAIGQRKTPGKVWKGKHLPGHYGVDNVT 180 Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 ++NL VV ++ ++ ++LV G VPG + + V + K K K Sbjct: 181 IQNLTVVGIEAEQNVLLVSGAVPG-HADGLLFVNTAAKGQPRIKQK 225 >gi|312601074|gb|ADQ90329.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae 168] Length = 230 Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats. Identities = 77/221 (34%), Positives = 121/221 (54%), Gaps = 7/221 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GM+ ++ EG IPV+++ + V T +KN Y A+Q+ A + K Sbjct: 2 KGILGKKVGMSQLFTTEGIAIPVSIIEVPENIVTKIITKEKNSYDAIQLAAFDKKQSRFL 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ N PK+ + EFR D +G S F+ G+ VDVTG + GKGF+G Sbjct: 62 KPEIGHFAKANTKPKRFIKEFR---DFQGYKLGQTVDVSIFSPGEFVDVTGTSKGKGFAG 118 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180 +KR+N +HG + TG D +V K M GR+G +VT ++LE++ Sbjct: 119 TIKRYNQAIGPRSHGGGGGSKPIRQTGSLGDISGNKVVKGMTMPGRLGHEKVTKQSLEII 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 VD + L+++KG VPG KK S+++++ + K N K VS Sbjct: 179 KVDKENNLLVLKGSVPGPKK-SFLVIKSAIKKP-NPKNPVS 217 >gi|37912991|gb|AAR05320.1| ribosomal protein L3 [uncultured marine alpha proteobacterium HOT2C01] Length = 229 Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats. Identities = 103/212 (48%), Positives = 140/212 (66%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSG++A+K+GM+ +Y G IPVTVLH++NC+++ T + V VGA + K Sbjct: 1 MRSGIIAKKIGMSNLYTQSGTNIPVTVLHVENCKIIDRVTSENENSDKVLVGACKLKKTK 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 S +GFF K L EF + KD + + G S+F GQ +DV+G T GKGF Sbjct: 61 KS--QKGFFDKKKTDAYKYLREFEISKDQE-IKSGDELKASHFKEGQFIDVSGYTKGKGF 117 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G MKRHNF GLRA+HGVS+SHRSHGSTG QDPG+VFK KKMAG+ G T+++L+VV Sbjct: 118 AGVMKRHNFSGLRASHGVSVSHRSHGSTGQCQDPGKVFKGKKMAGQYGDVHKTLQSLQVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD+++ LI VKG PG+ + +W++V DS K Sbjct: 178 KVDEQKNLICVKGATPGS-RGTWLVVEDSIKK 208 >gi|307069692|ref|YP_003878169.1| 50S ribosomal subunit protein L3 [Candidatus Zinderia insecticola CARI] gi|306482952|gb|ADM89823.1| 50S ribosomal subunit protein L3 [Candidatus Zinderia insecticola CARI] Length = 202 Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats. Identities = 80/204 (39%), Positives = 123/204 (60%), Gaps = 3/204 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK-VKNVSK 63 ++ +K+GM+C+YN G IPVT++ + N V + + K+ Y ++Q+ G+ K N+ K Sbjct: 1 MIGKKIGMSCLYNKNGSMIPVTIIDVSNNFVTQIKNIKKDKYFSIQISYGKNKISSNMKK 60 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P+ G F + EF+ K +G + F + Q V + G +IGKGFSG Sbjct: 61 PLIGHFYKSKTKYNYIIKEFK-NKRYSKFNLGERIKINIFNLNQKVSIKGKSIGKGFSGT 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 +KRHNF RA+HG S SH+S GS G QDPGRVFK KKM G++G T++NLE++ +D Sbjct: 120 IKRHNFSSGRASHGNSRSHKSPGSVGMCQDPGRVFKGKKMCGQLGNKNCTIRNLEILKID 179 Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207 +K L+ +KG +PG KN+++ + Sbjct: 180 NKNNLLWIKGSIPG-FKNNFVFIY 202 >gi|116283537|gb|AAH16586.1| Mrpl3 protein [Mus musculus] Length = 243 Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 70/210 (33%), Positives = 104/210 (49%), Gaps = 5/210 (2%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP--MRGFF 69 M ++ +G++ VT+L + +C V+ + + + + G V KP F+ Sbjct: 1 MMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKIAALTVGGKTVSRFYKPDSRLEFY 60 Query: 70 SSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129 + + PK+ F V D+ ++ G+ ++F GQ VDVT TIGKGF G MKR F Sbjct: 61 RDLGLPPKQIHKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKGFQGVMKRWGF 119 Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLI 189 G A+HG + +HR G+ D RV+ KM GRMG TV L+V V+ K +I Sbjct: 120 KGQPASHGQTKTHRRPGAI-STGDIARVWPGTKMPGRMGNQNRTVYGLKVWRVNTKHNII 178 Query: 190 LVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 V G VPG KN + ++DS A K Sbjct: 179 YVNGSVPG-HKNCLVKIKDSTLPAYKDSCK 207 >gi|57239336|ref|YP_180472.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Welgevonden] gi|57161415|emb|CAH58339.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Welgevonden] Length = 231 Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 102/215 (47%), Positives = 145/215 (67%), Gaps = 5/215 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ K+G + +++ EG+RIPVT+LHL + VV + D +GY +V G N+ Sbjct: 4 RIGLLLEKVGHSAIFDNEGKRIPVTLLHLRDSFVVSIKDKDSHGYTSVV--FGMKVSTNM 61 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP N++ K+FE RV D+ L VG+ ++F Q VD+TG ++GKGF+ Sbjct: 62 KKPQLKILQKSNINVNCKIFESRVDHIDN-LTVGAKVLITHFVENQYVDITGCSLGKGFA 120 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF GL+A+HGVSISHRS GSTG QDPGRV+K KKMAG +G +RVTV+N++V+S Sbjct: 121 GVMKRHNFKGLKASHGVSISHRSQGSTGQCQDPGRVYKGKKMAGHLGNSRVTVQNIKVIS 180 Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVN 215 VD ++ L++VKG +PGA+ S++ VRD+ K V Sbjct: 181 VDKEKSLLVVKGNNIPGAQ-GSYLFVRDAIKKPVP 214 >gi|215400772|ref|YP_002327533.1| ribosomal protein L3 [Vaucheria litorea] gi|194441222|gb|ACF70950.1| ribosomal protein L3 [Vaucheria litorea] Length = 196 Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 74/198 (37%), Positives = 118/198 (59%), Gaps = 3/198 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V+ EG +PVTV+ + C V +T +GY A+Q+G + ++ ++K G Sbjct: 1 MTQVFYKEGLAVPVTVIRIGPCLVTKIKTTTTDGYNAIQIGYCQVPIRKLTKGQLGHLKK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 V + P K L E+ + ++ VG + + + F +GQLV+++G++IGKGFSG KR+NF Sbjct: 61 VGLPPLKYLTEYNFKDINEFY-VGQILTINNFNLGQLVNISGLSIGKGFSGTCKRYNFKR 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 THG S SH++ GS G PGRVF KKM G+ G +VT+ L+++ +D + L++V Sbjct: 120 GPMTHG-SKSHKAPGSIGPGTTPGRVFPGKKMPGQHGNKKVTILKLKILGIDTEENLLVV 178 Query: 192 KGCVPGAKKNSWILVRDS 209 KG VPG N ++ + + Sbjct: 179 KGSVPGKPGN-FLNITPA 195 >gi|86158411|ref|YP_465196.1| 50S ribosomal protein L3 [Anaeromyxobacter dehalogenans 2CP-C] gi|109893409|sp|Q2IJD0|RL3_ANADE RecName: Full=50S ribosomal protein L3 gi|85774922|gb|ABC81759.1| LSU ribosomal protein L3P [Anaeromyxobacter dehalogenans 2CP-C] Length = 236 Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 80/226 (35%), Positives = 120/226 (53%), Gaps = 8/226 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG---EAK 57 M +G++A+K+GMT ++ EG +PVTVL C VV +T +K+GY AV +G G E Sbjct: 1 MSTGLLAKKVGMTQIFTPEGDCVPVTVLEAGPCTVVRRKTAEKDGYDAVVIGFGVVDEKH 60 Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPS-YFTVGQLVDVTGM 114 +SKP G F + + E RV+ L G V + F Q +DV G+ Sbjct: 61 AHRLSKPEVGVFKKAGTPIFRHVKEIRVKDAKLLGDLKAGDVLTVDKVFKANQRIDVAGV 120 Query: 115 TIGKGFSGAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 T G+GF+G MKR N G R + HR G+ G R+ PG+V+K K + G G + +T Sbjct: 121 TKGRGFTGVMKRWNMKGAARDSSTAHEHHRHVGAIGQRKTPGKVWKGKHLPGHYGVDNIT 180 Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 ++NL VV ++ ++ ++LV G VPG + + V + K K K Sbjct: 181 IQNLTVVGIEPEQNVLLVSGAVPG-HADGLLFVNTAAKGQPRIKQK 225 >gi|262341013|ref|YP_003283868.1| 50S ribosomal protein L3 [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272350|gb|ACY40258.1| 50S ribosomal protein L3 [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 210 Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats. Identities = 89/205 (43%), Positives = 132/205 (64%), Gaps = 3/205 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ + +GMT ++ G+ +P TV+ ++ C V+ +T++ +GY +VQ+G GE K+K + Sbjct: 2 SGLIGKNIGMTSIFLENGKNVPCTVIKVNPCYVIQIKTVENDGYFSVQLGTGEKKLKKTN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 P+ G F +SP+KKL EFR + L +G S F G+LV+V G++ GKGF G Sbjct: 62 NPLLGHFKKSGLSPRKKLLEFR-ENSISHLKLGEKVSVDTFKKGELVNVKGISKGKGFQG 120 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRHNF G +HG RS GS G DP RVFK KKMAG+MG +TVKNLE++ Sbjct: 121 VVKRHNFSGVGERSHGQHNRLRSPGSIGAGSDPSRVFKGKKMAGKMGKKNITVKNLEILK 180 Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206 +D + LI++KG VPG KNS++++ Sbjct: 181 IDIHQNLIILKGSVPG-NKNSYLMI 204 >gi|183221347|ref|YP_001839343.1| 50S ribosomal protein L3 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911440|ref|YP_001962995.1| 50S ribosomal protein L3 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|226730528|sp|B0SAF4|RL3_LEPBA RecName: Full=50S ribosomal protein L3 gi|226730529|sp|B0SSH7|RL3_LEPBP RecName: Full=50S ribosomal protein L3 gi|167776116|gb|ABZ94417.1| 50S Ribosomal protein L3 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779769|gb|ABZ98067.1| 50S ribosomal protein L3 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 207 Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 84/208 (40%), Positives = 115/208 (55%), Gaps = 7/208 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ KLGM ++N +G+ + VTVL + C V +T +GY AVQ+ G+AK K+ Sbjct: 1 MAKGLIGEKLGMAHIFNNDGKMVTVTVLRVGPCFVSQVKTEANDGYEAVQLAFGDAKEKH 60 Query: 61 VSKPMRGFFSSVNV-SPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGK 118 ++K G N+ +PKK L EF K + + VGS F + V VTG + GK Sbjct: 61 LTKAELGHIKKANIATPKKTLVEF---KGFEGVAVGSEVKLADIFALDDTVKVTGTSKGK 117 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G G +KRH F G A HG S R GS G PGRVFK KM GRMG + TV+NL+ Sbjct: 118 GTQGVVKRHGFAGGPAGHG-SRFQRHPGSIGSNTTPGRVFKGLKMGGRMGSEQTTVRNLK 176 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILV 206 VV +D L+ V G VPG ++ + + Sbjct: 177 VVKIDADANLVFVSGPVPGRERG-IVTI 203 >gi|313891553|ref|ZP_07825163.1| 50S ribosomal protein L3 [Dialister microaerophilus UPII 345-E] gi|329121828|ref|ZP_08250443.1| 50S ribosomal protein L3 [Dialister micraerophilus DSM 19965] gi|313120012|gb|EFR43194.1| 50S ribosomal protein L3 [Dialister microaerophilus UPII 345-E] gi|327467766|gb|EGF13258.1| 50S ribosomal protein L3 [Dialister micraerophilus DSM 19965] Length = 213 Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 86/215 (40%), Positives = 125/215 (58%), Gaps = 5/215 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ RKLGM+ V+ G +PV+V+ + VV +T++ +GY AVQ+G G K K+ Sbjct: 1 MSKAILGRKLGMSQVFAENGDLVPVSVIEVLPNTVVAVKTVETDGYYAVQLGYGAIKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP++G F V+P K L E R + VG + F G ++DV G++ GKGF Sbjct: 61 LTKPLKGQFEKAGVAPTKFLREHRFSEKPA-YEVGQTLAADIFAEGDVIDVVGISKGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD--PGRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KRHN +HG S +HR S G R G+VFK KKM G MG +RVTV+NL+ Sbjct: 120 AGTIKRHNHQRGPESHG-SKNHRQTASLGARMSGGGGKVFKGKKMPGHMGCDRVTVQNLK 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VV +D R L+LVK K + V+++ KSA Sbjct: 179 VVRIDTARNLMLVK-GGIPGPKGGLVKVQEAVKSA 212 >gi|145341932|ref|XP_001416053.1| Plastid ribosomal protein L3, imported to chloroplast, large ribosomal subunit [Ostreococcus lucimarinus CCE9901] gi|144576277|gb|ABO94345.1| Plastid ribosomal protein L3, imported to chloroplast, large ribosomal subunit [Ostreococcus lucimarinus CCE9901] Length = 241 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 86/211 (40%), Positives = 111/211 (52%), Gaps = 7/211 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDN-CQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 G K GMT V+ +G +PVTV+ + + V +T +GY AVQVG + + Sbjct: 25 VGAFGSKAGMTQVFTDDGLCVPVTVIAVRDGNVVTQVKTEATDGYNAVQVGYDAVRDDKL 84 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGF 120 +KP G + L EFR++ D VG+ P F G VDV G TIGKGF Sbjct: 85 TKPELGHCKKAGAPALRHLEEFRLR-DAPTYEVGAQIKPTELFKEGDKVDVRGRTIGKGF 143 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GA+KR+ F THG S SHR HGS G +PGR++ K+M G MG VT K L VV Sbjct: 144 QGAVKRYGFSRGLMTHG-SKSHRQHGSIGSGTNPGRIYPGKRMHGHMGNEMVTTKGLTVV 202 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 SV + I+VKG VPG KK + V + K Sbjct: 203 SV--EDDCIIVKGNVPG-KKGALCKVTPNKK 230 >gi|88608492|ref|YP_506157.1| ribosomal protein L3 [Neorickettsia sennetsu str. Miyayama] gi|88600661|gb|ABD46129.1| ribosomal protein L3 [Neorickettsia sennetsu str. Miyayama] Length = 210 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 94/212 (44%), Positives = 131/212 (61%), Gaps = 7/212 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ +K+G T VY+ +P+T+L L+ V+ +++G + +V G K + Sbjct: 3 RVGLLLKKVGCTSVYDDRFSLVPITLLQLEENVVLSA--EERDGVVIARVSFGTRK---L 57 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +P + + ++ EFRV P+GS + +F GQ VD G +IGKGF+ Sbjct: 58 KRPQSACLKKLGLEKGGRVVEFRVSPRFMPEPLGS-LTVEHFRPGQYVDAVGTSIGKGFA 116 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF GLRA+HGVSISHRS GSTG QDPG+VFK KKMAG MG RVT++NL V Sbjct: 117 GVMKRHNFAGLRASHGVSISHRSGGSTGQCQDPGKVFKGKKMAGHMGNARVTIQNLLVQL 176 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + LI V+G VPG KNS++L++D+ K Sbjct: 177 VDVENCLIGVRGSVPGC-KNSYVLLKDALKKG 207 >gi|320166925|gb|EFW43824.1| mitochondrial ribosomal protein L3 [Capsaspora owczarzaki ATCC 30864] Length = 566 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 127/212 (59%), Gaps = 4/212 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GV+A K+GM +N G+R+P+TVL + + V+ R + +GY A+Q+ AGE K Sbjct: 324 RTGVIATKVGMMHTWNHWGQRLPLTVLQISDAAVLDFRVPESHGYTALQIAAGEIKQP-- 381 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +K + G F V ++ +K + EFRV + L+P G+ ++F GQ VDV T G+GF+ Sbjct: 382 AKHVEGTFRRVGLTARKHIHEFRVTAN-ALIPPGTRLYAAHFIPGQHVDVLANTKGRGFA 440 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRH G A+HG S+ HR+ GS G GRV+ K+MAG MG NL V Sbjct: 441 GVMKRHGMKGSPASHGHSLVHRAMGSFGGGGGMGRVYPGKRMAGHMGTIPAMHHNLLVYR 500 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++ K L+ VKG VPG +K +++ +RD+ ++ Sbjct: 501 INTKHNLVYVKGSVPGPRK-AFVYLRDAVRAP 531 >gi|197294631|ref|YP_001799172.1| 50S ribosomal protein L3 [Candidatus Phytoplasma australiense] gi|226730545|sp|B1VAE8|RL3_PHYAS RecName: Full=50S ribosomal protein L3 gi|171853958|emb|CAM11921.1| 50S ribosomal protein L3 [Candidatus Phytoplasma australiense] Length = 221 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 80/224 (35%), Positives = 123/224 (54%), Gaps = 9/224 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++N +G IP+T++ + V+ + + +GY A Q+G + K K Sbjct: 1 MAQGILGKKIGMTQMFNEQGEIIPITIVDVSANVVLQQKNVAIDGYNATQIGFDDKKDKI 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD----DLLPVGSVFSPSYFTVGQLVDVTGMTI 116 +KPM G F +PK+ + E +K++ L VG S F VG LVDVTG + Sbjct: 61 TTKPMLGHFKKAKTTPKRFIKEIIFKKENISSLSALAVGDQVSCDLFQVGDLVDVTGTSK 120 Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 GKGF+G +KRHN THG S HR GS K KK+ G+MG VT++N Sbjct: 121 GKGFAGVIKRHNQSRGPETHG-SRHHRRPGSM---GPIKGKIKGKKLPGQMGHQTVTIQN 176 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220 L + SVD+++ L L+KG VPG K +++++ + K + Sbjct: 177 LVLFSVDNQKNLFLIKGSVPGPNKG-FVVIKSAVKKLSKEQANA 219 >gi|148244329|ref|YP_001219023.1| 50S ribosomal protein L3 [Candidatus Vesicomyosocius okutanii HA] gi|226730587|sp|A5CXK4|RL3_VESOH RecName: Full=50S ribosomal protein L3 gi|146326156|dbj|BAF61299.1| 50S ribosomal protein L3 [Candidatus Vesicomyosocius okutanii HA] Length = 241 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 91/224 (40%), Positives = 136/224 (60%), Gaps = 10/224 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEA---- 56 M +V +K+GMT + + +G +PV+V+ ++ ++V RT+D +GY A+QV G+ Sbjct: 1 MAIDLVGQKIGMTRLISDDGSIMPVSVIKIEPNRIVQTRTIDIDGYRAIQVTTGKKVNKK 60 Query: 57 ---KVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113 KV+ +S ++G ++ + L+EF+++ D+ + + S F G VDV G Sbjct: 61 GEAKVRRISAAIKGHYAKASQEIGLGLWEFKLE--DNEITNATSIDISLFGAGHYVDVIG 118 Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 + GKGF G +K HNF ATHG SISHR+ GSTG Q+PGRVFK KKMAG MG +VT Sbjct: 119 KSKGKGFQGGVKLHNFQMQDATHGNSISHRAIGSTGQCQEPGRVFKGKKMAGHMGNKQVT 178 Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 + L+VV VD ++ +ILVKG +PGA K ++ V S K + K Sbjct: 179 QECLKVVKVDIEKSVILVKGSIPGAIKG-FVKVSLSPKKDNSNK 221 >gi|42559212|sp|Q7XYP4|RK3_BIGNA RecName: Full=50S ribosomal protein L3, chloroplastic; Flags: Precursor gi|32307490|gb|AAP79150.1| ribosomal protein rpL3 [Bigelowiella natans] Length = 302 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 82/212 (38%), Positives = 117/212 (55%), Gaps = 4/212 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLD-NCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 ++ G++ K GMT Y+ EG PVTV+ L+ V +T + +GY AVQ+ E + + Sbjct: 87 IKMGLMGTKAGMTTYYDDEGIAHPVTVIALEAGNVVTQVKTKETDGYDAVQLAYKETRDR 146 Query: 60 NVSKPMRGFFSSVN-VSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 + P R V K L EF++ + P + + F VG LVDV+G + GK Sbjct: 147 TIPWPERQHLRKHGNVKAMKHLKEFKIADVSEFTPGQQLKAEELFEVGDLVDVSGTSSGK 206 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G+++R +HG S SHR HGS GC P RV+K KMAGRMG R TVK L Sbjct: 207 GFQGSIRRWGMKRGPMSHG-SKSHRQHGSIGCSATPSRVYKGLKMAGRMGNERKTVKKLP 265 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V+ V+D+ I+V+G VPG KK + + +R + Sbjct: 266 VMMVNDEEKYIVVRGSVPG-KKGTIVELRPTK 296 >gi|42520530|ref|NP_966445.1| 50S ribosomal protein L3 [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410269|gb|AAS14379.1| ribosomal protein L3 [Wolbachia endosymbiont of Drosophila melanogaster] Length = 240 Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 97/215 (45%), Positives = 143/215 (66%), Gaps = 6/215 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ +G T +Y+ R+ VT+LHL ++ + DK GY +V +G G+ K N+ Sbjct: 9 RIGLLMMNIGHTAMYSDN-SRMAVTLLHLSETHIIDIKGQDKCGYNSVILGTGDFK--NI 65 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP + ++ K KL+E R+ D + G ++F VGQ +D+TG +IGKGF+ Sbjct: 66 AKPQLEYLKKKGINNKCKLYESRL-NDLSGIECGKKVGINHFVVGQYLDITGYSIGKGFA 124 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF GLRA+HGVSI+HRS GSTG QDPGRVFK KKMAG +G +R+T +N++++S Sbjct: 125 GVMKRHNFSGLRASHGVSIAHRSQGSTGQCQDPGRVFKGKKMAGHLGNSRITAQNMKILS 184 Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVN 215 +D + +I VKG VPG KNS++ VRD+ K +++ Sbjct: 185 IDHENSIIAVKGNNVPG-FKNSYVFVRDAVKKSLH 218 >gi|99032309|pdb|2FTC|C Chain C, Structural Model For The Large Subunit Of The Mammalian Mitochondrial Ribosome Length = 211 Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 76/214 (35%), Positives = 115/214 (53%), Gaps = 5/214 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVK 59 R G++A KLGM ++ +G++ VT+L + +C V+ + + + NG MA + VG Sbjct: 1 RVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSRF 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + + F+ + + PK+ + F + + + P G+ ++F GQ VDVT TIGKG Sbjct: 61 RKATSILEFYRELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGKG 119 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR F G ATHG + +HR G+ D GRV+ KM G+MG T L+V Sbjct: 120 FQGVMKRWGFKGQPATHGQTKTHRRPGAV-ATGDIGRVWPGTKMPGKMGNIYRTEYGLKV 178 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 ++ K +I V G VPG KN + V+DS A Sbjct: 179 WRINTKHNIIYVNGSVPG-HKNCLVKVKDSKLPA 211 >gi|58617356|ref|YP_196555.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Gardel] gi|58416968|emb|CAI28081.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Gardel] Length = 235 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 100/215 (46%), Positives = 146/215 (67%), Gaps = 5/215 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ K+G + +++ EG+RIPVT+LHL + VV + D +GY +V G N+ Sbjct: 8 RIGLLLEKVGHSAIFDNEGKRIPVTLLHLRDSFVVSIKDKDSHGYTSVV--FGMKVSTNM 65 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP N++ K+FE RV D+L+ VG+ ++F Q VD+TG ++GKGF+ Sbjct: 66 KKPQLKILQKSNINVNCKIFESRVDHIDNLV-VGAKVLITHFVENQYVDITGHSLGKGFA 124 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF GL+A+HGVSISHRS GSTG QDPGRV+K KKMAG +G ++VTV+N++V+S Sbjct: 125 GVMKRHNFKGLKASHGVSISHRSQGSTGQCQDPGRVYKGKKMAGHLGNSKVTVQNIKVIS 184 Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVN 215 VD ++ L++VKG +PGA+ S++ VRD+ K + Sbjct: 185 VDKEKSLLVVKGNNIPGAQ-GSYLFVRDAIKKPIP 218 >gi|297286892|ref|XP_001115583.2| PREDICTED: 39S ribosomal protein L3, mitochondrial [Macaca mulatta] Length = 243 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 108/210 (51%), Gaps = 5/210 (2%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVKNVSKPMRGFF 69 M ++ +G + VT+L + +C V+ + + + NG A + VG + P+ F+ Sbjct: 1 MMPLWTKDGEKHVVTLLQVQDCHVLKYTSKENHNGKTAALSVGGKTVSRFRKATPVLEFY 60 Query: 70 SSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129 + + PK+ + F + + + P G+ ++F GQ VDVT TIGKGF G +KR F Sbjct: 61 RELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGKGFQGVVKRWGF 119 Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLI 189 G ATHG + +HR G+ D GRV+ KM G+MG T L+V ++ K +I Sbjct: 120 KGQPATHGQTKTHRRPGAL-STGDIGRVWPGTKMPGKMGNIYRTAYGLKVWRINTKHNII 178 Query: 190 LVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 V G VPG KN + VRDS A GK Sbjct: 179 YVNGSVPG-HKNCLVKVRDSKLPAYKDLGK 207 >gi|116327224|ref|YP_796944.1| 50S ribosomal protein L3 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116327264|ref|YP_796984.1| 50S ribosomal protein L3 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116332122|ref|YP_801840.1| 50S ribosomal protein L3 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122280148|sp|Q04PT8|RL3_LEPBJ RecName: Full=50S ribosomal protein L3 gi|122284929|sp|Q055E4|RL3_LEPBL RecName: Full=50S ribosomal protein L3 gi|116119968|gb|ABJ78011.1| 50S Ribosomal protein L3 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116120008|gb|ABJ78051.1| 50S Ribosomal protein L3 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125811|gb|ABJ77082.1| 50S Ribosomal protein L3 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 206 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 114/207 (55%), Gaps = 5/207 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GM+ +++ +G IPVTVL + C V ++++ +GY A+Q+ + K Sbjct: 1 MAKGLIGKKVGMSQIFDEQGNIIPVTVLEVGPCAVSQVKSVENDGYEAIQLAFQDTKEFQ 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119 +SK + + ++ PKK L EFR D GSV F V +V VTG++ G+G Sbjct: 61 ISKAEKNHLAKASLGPKKVLREFRSFGDSPAT--GSVLKVQDIFAVSDVVKVTGVSKGRG 118 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KR + S HR GS G P RVFK K+ GR G + TV+NL+V Sbjct: 119 FQGVVKR-HGHAGGPGGHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQQTTVRNLKV 177 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILV 206 V +++++ L+ V G VPG N+ I + Sbjct: 178 VRINEEKNLVFVSGAVPG-TTNTVITI 203 >gi|15835429|ref|NP_297188.1| 50S ribosomal protein L3 [Chlamydia muridarum Nigg] gi|270285609|ref|ZP_06195003.1| 50S ribosomal protein L3 [Chlamydia muridarum Nigg] gi|270289619|ref|ZP_06195921.1| 50S ribosomal protein L3 [Chlamydia muridarum Weiss] gi|301337005|ref|ZP_07225207.1| 50S ribosomal protein L3 [Chlamydia muridarum MopnTet14] gi|13878709|sp|Q9PJL4|RL3_CHLMU RecName: Full=50S ribosomal protein L3 gi|7190843|gb|AAF39617.1| ribosomal protein L3 [Chlamydia muridarum Nigg] Length = 221 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 82/218 (37%), Positives = 112/218 (51%), Gaps = 11/218 (5%) Query: 1 MRSGV--VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK- 57 MRS + + +K GM V++ G + +V+ ++ V +T +GY AVQ+GA K Sbjct: 1 MRSQLSLIGKKEGMMHVFDKNGNLVACSVISIEPNVVAQLKTASSDGYNAVQMGADAVKA 60 Query: 58 -----VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111 K SK + G F + L E V ++ + +G F F VDV Sbjct: 61 PEKTIEKRFSKALLGHFKKSGGCAFRVLKEVVVSEEAVQSVSLGDEFGVEIFDGVSNVDV 120 Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171 G++ GKGF G MK+ F G +HG S HR GS G R PGR F K MG +R Sbjct: 121 CGISKGKGFQGVMKKFGFRGGPKSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGCDR 179 Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VTVKNLEVV VD R ++LVKG +PG K S ++V+ S Sbjct: 180 VTVKNLEVVKVDLDRKVMLVKGAIPG-FKGSVVVVKRS 216 >gi|1185166|emb|CAA91649.1| 50S ribosomal protein L3 [Odontella sinensis] Length = 196 Score = 211 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 76/195 (38%), Positives = 110/195 (56%), Gaps = 3/195 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT +++ G IPVT+L + C + +T +GY A+Q+G G K++++P G Sbjct: 1 MTQIFDESGNIIPVTILKVGPCVITQVKTDLNDGYNAIQIGYGTVSNKSLTQPELGHLQK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 N+ P K L EFRV ++ VG V + + GQ +DVTG + GKGFSG KRHNF Sbjct: 61 SNIQPLKYLKEFRVNNPEE-FKVGQVVNVESLSTGQFIDVTGKSSGKGFSGLQKRHNFTR 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 THG S +HR+ GS G PGRV KKMAG++G K L+++ V+ +++V Sbjct: 120 GPMTHG-SKNHRAPGSIGMGTTPGRVLPGKKMAGQLGNKVTKTKKLKIIQVNGNENILVV 178 Query: 192 KGCVPGAKKNSWILV 206 KG VPG N + + Sbjct: 179 KGSVPGKPGN-LVTI 192 >gi|4376945|gb|AAD18786.1| L3 Ribosomal Protein [Chlamydophila pneumoniae CWL029] gi|8979019|dbj|BAA98854.1| L3 ribosomal protein [Chlamydophila pneumoniae J138] Length = 225 Score = 211 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 76/218 (34%), Positives = 113/218 (51%), Gaps = 11/218 (5%) Query: 1 MR--SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58 MR V+ +K GM +++ +G + +V+ ++ V +T + +GY ++Q+GA E Sbjct: 7 MRSHISVMGKKEGMIHIFDKDGSLVACSVIRVEPNVVTQIKTKESDGYFSLQIGAEEMNA 66 Query: 59 K------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111 VSKP G + L E R ++ + + +G F F VDV Sbjct: 67 PAHTITKRVSKPKLGHLRKAGGRVFRFLKEVRGSEEALNGVSLGDAFGLEVFEDVSSVDV 126 Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171 G++ GKGF G MK+ F G +HG S HR GS G R PGR F K MG Sbjct: 127 RGISKGKGFQGVMKKFGFRGGPGSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGAEN 185 Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VTVKNLEV+ VD ++ ++LVKG +PGA + S ++V+ S Sbjct: 186 VTVKNLEVIKVDLEKKVLLVKGAIPGA-RGSIVIVKHS 222 >gi|54020070|ref|YP_115700.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae 232] gi|81823546|sp|Q601L5|RL3_MYCH2 RecName: Full=50S ribosomal protein L3 gi|53987243|gb|AAV27444.1| 50s ribosomal protein L3 [Mycoplasma hyopneumoniae 232] Length = 230 Score = 211 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 76/221 (34%), Positives = 120/221 (54%), Gaps = 7/221 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GM+ ++ EG I V+++ + V T +KN Y A+Q+ A + K Sbjct: 2 KGILGKKVGMSQLFTTEGIAISVSIIEVPENIVTKIITKEKNSYNAIQLAAFDKKQSRFL 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ N PK+ + EFR D +G S F+ G+ VDVTG + GKGF+G Sbjct: 62 KPEIGHFAKANTKPKRFIKEFR---DFQGYKLGQTVDVSIFSPGEFVDVTGTSKGKGFAG 118 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180 +KR+N +HG + TG D +V K M GR+G +VT ++LE++ Sbjct: 119 TIKRYNQAIGPRSHGGGGGSKPIRQTGSLGDISGNKVVKGMTMPGRLGHEKVTKQSLEII 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 VD + L+++KG VPG KK S+++++ + K N K VS Sbjct: 179 KVDKENNLLVLKGSVPGPKK-SFLVIKSAIKKP-NPKNPVS 217 >gi|29839861|ref|NP_828967.1| 50S ribosomal protein L3 [Chlamydophila caviae GPIC] gi|42559611|sp|Q824Q1|RL3_CHLCV RecName: Full=50S ribosomal protein L3 gi|29834208|gb|AAP04845.1| ribosomal protein L3 [Chlamydophila caviae GPIC] Length = 221 Score = 211 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 76/221 (34%), Positives = 115/221 (52%), Gaps = 11/221 (4%) Query: 1 MRSGV--VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK- 57 MRS + + +K GM V++ +G + +V+ + + V + +GY A+Q+GA E Sbjct: 1 MRSQLSLMGKKEGMIHVFDKDGNLVACSVISVGSNVVTQIKVDSTDGYNAIQMGANEINV 60 Query: 58 -----VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111 K ++KP G L E R+ +D + + +G+ F VD+ Sbjct: 61 PEKTLEKRMNKPELGHLKKSGSRVFGLLKEVRLSEDAINEVSLGNEFGLEVLEDISSVDI 120 Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171 +G++ GKGF G MKR F G THG S HR GS G R PGR F K MG Sbjct: 121 SGVSKGKGFQGVMKRFGFRGGPKTHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGTVN 179 Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VTVKNLEVV +D ++ ++LVKG +PG + S +++R S ++ Sbjct: 180 VTVKNLEVVKIDLEKKVLLVKGAIPGP-RGSVVVIRRSSRA 219 >gi|91200667|emb|CAJ73718.1| strongly similar to 50S ribosomal protein L3 [Candidatus Kuenenia stuttgartiensis] Length = 196 Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats. Identities = 79/196 (40%), Positives = 118/196 (60%), Gaps = 3/196 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT +Y EG +PVT++ C V+ +TL +GY AVQ+G + K+K +P G + Sbjct: 1 MTQIYTGEGALVPVTLIKAGPCNVLQVKTLGNDGYSAVQLGYKDKKIKRAKRPEIGHAAK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 ++ P + + E ++ D + +G + F +LVDV G++ GKGF+G MKR G Sbjct: 61 ASLLPGRFVKEVKLDTVSD-IHLGQAVTLDIFEDVKLVDVIGISKGKGFAGVMKRWGMKG 119 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 THG S HRS GS G DPGRV + KKM G++G RVT+KNL+VV VD ++ ++ V Sbjct: 120 GPQTHG-STRHRSVGSVGAGTDPGRVIRGKKMPGQLGRERVTIKNLDVVKVDKEKNMLFV 178 Query: 192 KGCVPGAKKNSWILVR 207 KG VPG K S+++++ Sbjct: 179 KGAVPG-YKGSYLIIK 193 >gi|225629696|ref|ZP_03787668.1| ribosomal protein L3 [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225630301|ref|YP_002727092.1| ribosomal protein L3 [Wolbachia sp. wRi] gi|225591449|gb|EEH12517.1| ribosomal protein L3 [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225592282|gb|ACN95301.1| ribosomal protein L3 [Wolbachia sp. wRi] Length = 240 Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats. Identities = 97/215 (45%), Positives = 143/215 (66%), Gaps = 6/215 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ +G T +Y+ R+ VT+LHL ++ + DK GY +V +G G+ K N+ Sbjct: 9 RIGLLMMNIGHTAMYSDN-SRMAVTLLHLSETYIIDIKGQDKCGYNSVILGTGDFK--NI 65 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP + ++ K KL+E R+ D + G ++F VGQ +D+TG +IGKGF+ Sbjct: 66 AKPQLEYLKKKGINNKCKLYESRL-NDLSGIECGKKVGINHFVVGQYLDITGYSIGKGFA 124 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF GLRA+HGVSI+HRS GSTG QDPGRVFK KKMAG +G +R+T +N++++S Sbjct: 125 GVMKRHNFSGLRASHGVSIAHRSQGSTGQCQDPGRVFKGKKMAGHLGNSRITAQNMKILS 184 Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVN 215 +D + +I VKG VPG KNS++ VRD+ K +++ Sbjct: 185 IDHENSIIAVKGNNVPG-FKNSYVFVRDAVKKSLH 218 >gi|195657099|gb|ACG48017.1| 50S ribosomal protein L3 [Zea mays] Length = 267 Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 113/211 (53%), Gaps = 5/211 (2%) Query: 3 SGVVARKLGMTCVYN-IEGRRIPVTVLHL--DNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 GV+A K+GM ++ G+ +PVTV+ V +T +GY AVQVG + Sbjct: 50 VGVMATKVGMMTYFDPETGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVRED 109 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +++P G P + L EFR+ D P + F G L+DV+G +IGKG Sbjct: 110 KLTRPELGHLGKAGAPPLRHLQEFRLTAVDAFEPGQPLDFADLFKEGDLIDVSGNSIGKG 169 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KRHNF THG S SHR GS G PGRV+K KKM GRMGG + ++ L++ Sbjct: 170 FQGGIKRHNFKRGLMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKI 228 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V +D+ ++++KG VPG N + + + Sbjct: 229 VKIDNNLRVLMIKGAVPGKPGN-LLRITPAK 258 >gi|15639182|ref|NP_218628.1| 50S ribosomal protein L3 [Treponema pallidum subsp. pallidum str. Nichols] gi|189025422|ref|YP_001933194.1| 50S ribosomal protein L3 [Treponema pallidum subsp. pallidum SS14] gi|6094076|sp|O83219|RL3_TREPA RecName: Full=50S ribosomal protein L3 gi|226730585|sp|B2S2D6|RL3_TREPS RecName: Full=50S ribosomal protein L3 gi|3322453|gb|AAC65174.1| ribosomal protein L3 (rplC) [Treponema pallidum subsp. pallidum str. Nichols] gi|189017997|gb|ACD70615.1| ribosomal protein L3 [Treponema pallidum subsp. pallidum SS14] gi|291059596|gb|ADD72331.1| 50S ribosomal protein L3 [Treponema pallidum subsp. pallidum str. Chicago] Length = 208 Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 81/210 (38%), Positives = 121/210 (57%), Gaps = 5/210 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ +K+GMT +++ G PVTV+ +++ VV + +++ GY AV +G G K +S Sbjct: 2 VGLIGQKVGMTQIFDARGCVTPVTVIRVEHNVVVGLKDVERFGYSAVILGTGCMKKSRIS 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ + P + + EFR D + VG V + +DV ++ GKGF G Sbjct: 62 KPYAGQFAE-RIPPVRVMREFRGFTLD--VSVGQVLDVRVLESVRYLDVCALSKGKGFQG 118 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KR F G R++HG S HR GSTG PGR FKN KM GRMG RVTV+NL + + Sbjct: 119 VVKRWGFSGGRSSHG-SKFHREAGSTGQCTSPGRTFKNVKMPGRMGAERVTVQNLRIERI 177 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D G+++V+G VPG K + + +R + K Sbjct: 178 DVGLGVVMVRGAVPGRNK-ATVFLRTAVKR 206 >gi|16752393|ref|NP_444652.1| 50S ribosomal protein L3 [Chlamydophila pneumoniae AR39] gi|161353776|ref|NP_224843.2| 50S ribosomal protein L3 [Chlamydophila pneumoniae CWL029] gi|161353803|ref|NP_300703.2| 50S ribosomal protein L3 [Chlamydophila pneumoniae J138] gi|161484684|ref|NP_876945.2| 50S ribosomal protein L3 [Chlamydophila pneumoniae TW-183] gi|7674301|sp|Q9Z7Q7|RL3_CHLPN RecName: Full=50S ribosomal protein L3 gi|7189035|gb|AAF37984.1| ribosomal protein L3 [Chlamydophila pneumoniae AR39] Length = 219 Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats. Identities = 76/218 (34%), Positives = 113/218 (51%), Gaps = 11/218 (5%) Query: 1 MR--SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58 MR V+ +K GM +++ +G + +V+ ++ V +T + +GY ++Q+GA E Sbjct: 1 MRSHISVMGKKEGMIHIFDKDGSLVACSVIRVEPNVVTQIKTKESDGYFSLQIGAEEMNA 60 Query: 59 K------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111 VSKP G + L E R ++ + + +G F F VDV Sbjct: 61 PAHTITKRVSKPKLGHLRKAGGRVFRFLKEVRGSEEALNGVSLGDAFGLEVFEDVSSVDV 120 Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171 G++ GKGF G MK+ F G +HG S HR GS G R PGR F K MG Sbjct: 121 RGISKGKGFQGVMKKFGFRGGPGSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGAEN 179 Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VTVKNLEV+ VD ++ ++LVKG +PGA + S ++V+ S Sbjct: 180 VTVKNLEVIKVDLEKKVLLVKGAIPGA-RGSIVIVKHS 216 >gi|190571546|ref|YP_001975904.1| ribosomal protein L3 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357818|emb|CAQ55274.1| ribosomal protein L3 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 240 Score = 210 bits (536), Expect = 8e-53, Method: Composition-based stats. Identities = 96/215 (44%), Positives = 140/215 (65%), Gaps = 6/215 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ +G T +Y R+ VT+LHL ++ + DK GY +V +G G+ K + Sbjct: 9 RIGLLMTNVGHTAMYFDN-SRMAVTLLHLSETYIIDIKGQDKCGYNSVILGTGDLK--KI 65 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP + ++ K KL+E R+ + G ++F VGQ +D+TG ++GKGF+ Sbjct: 66 AKPQLEYLKKKGINSKCKLYESRLTDLFG-IECGKKVGVNHFVVGQYLDITGYSLGKGFA 124 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF GLRA+HGVSI+HRS GSTG QDPGRVFK KKMAG +G +RVTV+N++++S Sbjct: 125 GVMKRHNFSGLRASHGVSIAHRSQGSTGQCQDPGRVFKGKKMAGHLGNSRVTVQNMKILS 184 Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVN 215 +D + +I VKG VPG KNS++ VRD+ K ++ Sbjct: 185 IDYENSIIAVKGNNVPG-FKNSYVFVRDAVKKPLH 218 >gi|227501134|ref|ZP_03931183.1| ribosomal protein L3 [Anaerococcus tetradius ATCC 35098] gi|227216719|gb|EEI82120.1| ribosomal protein L3 [Anaerococcus tetradius ATCC 35098] Length = 209 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 77/186 (41%), Positives = 108/186 (58%), Gaps = 1/186 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 + K+GMT V + +G PVTVL D VV +T++ +GY A+QVG + K KNV+KP Sbjct: 4 IFTTKVGMTQVIDEDGVITPVTVLKADENVVVQVKTVETDGYNAIQVGYMDKKEKNVTKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +R F N S K+ L E + L +G + + F G +VDV + GKG GA+ Sbjct: 64 VREHFKKANASTKRYLREVNFGDETPELNLGDIITVEQFEAGDIVDVVATSKGKGTQGAI 123 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR N+G A+HG S SHR G+ DP RVFK +K +G+MG RVT++N+E+V V Sbjct: 124 KRWNYGRGPASHG-SKSHRVAGARAAGSDPARVFKGRKGSGKMGNERVTIQNIEIVKVSV 182 Query: 185 KRGLIL 190 + IL Sbjct: 183 EDNYIL 188 >gi|257067060|ref|YP_003153316.1| 50S ribosomal protein L3 [Anaerococcus prevotii DSM 20548] gi|256798940|gb|ACV29595.1| ribosomal protein L3 [Anaerococcus prevotii DSM 20548] Length = 209 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 79/186 (42%), Positives = 108/186 (58%), Gaps = 1/186 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 + K+GMT V + +G PVTVL D VV +T++ +GY A+QVG + K KNV+KP Sbjct: 4 IFTTKVGMTQVIDEDGVITPVTVLKADENVVVQVKTVETDGYNAIQVGYMDKKEKNVTKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +R F N S K+ L E ++ L +G + F G +VDV + GKG GA+ Sbjct: 64 VREHFKKANASTKRFLREINFGEETPELNLGDTITVEQFEAGDIVDVVATSKGKGTQGAI 123 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR N+G A+HG S SHR G+ DP RVFK +K +G+MG RVTV+N+EVV V Sbjct: 124 KRWNYGRGPASHG-SKSHRVAGARAAGSDPARVFKGRKGSGKMGNERVTVQNIEVVKVSV 182 Query: 185 KRGLIL 190 + IL Sbjct: 183 EDNYIL 188 >gi|242063968|ref|XP_002453273.1| hypothetical protein SORBIDRAFT_04g002980 [Sorghum bicolor] gi|241933104|gb|EES06249.1| hypothetical protein SORBIDRAFT_04g002980 [Sorghum bicolor] Length = 270 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 113/211 (53%), Gaps = 5/211 (2%) Query: 3 SGVVARKLGMTCVYN-IEGRRIPVTVLHL--DNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 GV+A K+GM ++ G+ +PVTV+ V +T +GY AVQVG + Sbjct: 53 VGVMATKVGMMTYFDPETGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVRED 112 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +++P G P K L EFR+ D P + F G ++DV+G TIGKG Sbjct: 113 KLTRPELGHLGKAGAPPLKHLQEFRLTAVDAFEPGQPLDFADLFKEGDIIDVSGNTIGKG 172 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KRHNF THG S SHR GS G PGRV+K KKM GRMGG + ++ L++ Sbjct: 173 FQGGIKRHNFKRGLMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGKKTKIRKLKI 231 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V +D+ ++++KG VPG N + + + Sbjct: 232 VKIDNDLRVLMIKGAVPGKPGN-LLRITPAK 261 >gi|224123986|ref|XP_002319213.1| predicted protein [Populus trichocarpa] gi|222857589|gb|EEE95136.1| predicted protein [Populus trichocarpa] Length = 222 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 81/209 (38%), Positives = 115/209 (55%), Gaps = 3/209 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 GV+ KLGM + G+ +PVTV+ + V +T +GY AVQVG + K + Sbjct: 7 VGVMGTKLGMMTYFEPNGKVVPVTVVGFREGNIVTQIKTDATDGYDAVQVGYRRVRDKKL 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G V P + L EFR+Q D + F G LVDV+G TIGKGF Sbjct: 67 TKPEMGHLEKAGVIPMRHLQEFRLQGLDGFEIGQKLLFEELFKEGDLVDVSGTTIGKGFQ 126 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNF +HG S SHR+ GS G PGRV+K KKM GRMGG + ++ L++V Sbjct: 127 GGIKRHNFKRGPMSHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVK 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 +D+ ++++KG +PG N + + + Sbjct: 186 IDNDLRVVMIKGALPGKPGN-LLRIAPAK 213 >gi|325479159|gb|EGC82256.1| 50S ribosomal protein L3 [Anaerococcus prevotii ACS-065-V-Col13] Length = 209 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 77/186 (41%), Positives = 109/186 (58%), Gaps = 1/186 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 + K+GMT V + +G PVTVL D VV +T++ +GY A+QVG + K KNV KP Sbjct: 4 IFTTKVGMTQVIDEDGVITPVTVLKADENVVVQVKTVETDGYNAIQVGYMDKKEKNVKKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +R F N + K+ L E ++ L +G V + F G +VD+ + GKG GA+ Sbjct: 64 VREHFKKANAATKRYLKEVNFGEETPELNLGDVITVEQFEAGDIVDIVATSKGKGTQGAI 123 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR N+G A+HG S SHR G+ DP RVFK +K +G+MG RVT++N+EVV V+ Sbjct: 124 KRWNYGRGPASHG-SKSHRVAGARAAGSDPARVFKGRKGSGKMGNERVTIQNIEVVKVNV 182 Query: 185 KRGLIL 190 + IL Sbjct: 183 EDNYIL 188 >gi|302822169|ref|XP_002992744.1| hypothetical protein SELMODRAFT_430901 [Selaginella moellendorffii] gi|300139485|gb|EFJ06225.1| hypothetical protein SELMODRAFT_430901 [Selaginella moellendorffii] Length = 222 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 81/209 (38%), Positives = 113/209 (54%), Gaps = 3/209 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 GV+ K+GM + +GR IPVTV+ + V +T +GY AVQVG + + Sbjct: 7 IGVMGTKVGMMTHFMPDGRAIPVTVIGFHEGNIVTQVKTEPTDGYNAVQVGYLRVRDTKL 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G + + P + L EFR+ D + F VG LVDV+G +IGKGF Sbjct: 67 TKPELGHLNKIGTIPMRHLQEFRLVSVDGFELSQRLNVEDIFKVGDLVDVSGKSIGKGFQ 126 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNF THG S SHR GS G PGRV+ KKM GRMG + ++ LE++ Sbjct: 127 GGIKRHNFKRGPMTHG-SKSHRQLGSIGAGTTPGRVYPGKKMPGRMGFQKTKIRKLEIIK 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 +D + +LVKG VPG + N + + + Sbjct: 186 IDPELRAVLVKGAVPGKRGN-LLRITPAK 213 >gi|194708314|gb|ACF88241.1| unknown [Zea mays] Length = 262 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 113/211 (53%), Gaps = 5/211 (2%) Query: 3 SGVVARKLGMTCVYN-IEGRRIPVTVLHL--DNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 GV+A K+GM ++ G+ +PVTV+ V +T +GY AVQVG + Sbjct: 45 VGVMATKVGMMTYFDPETGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVRED 104 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +++P G P + L EFR+ D P + F G L+DV+G +IGKG Sbjct: 105 KLTRPELGHLGKAGAPPLRHLQEFRLTAVDAFEPGQPLDFADLFKEGDLIDVSGNSIGKG 164 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KRHNF THG S SHR GS G PGRV+K KKM GRMGG + ++ L++ Sbjct: 165 FQGGIKRHNFKRGLMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKI 223 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V +D+ ++++KG VPG N + + + Sbjct: 224 VKIDNNLRVLMIKGAVPGKPGN-LLRITPAK 253 >gi|154274402|ref|XP_001538052.1| hypothetical protein HCAG_05657 [Ajellomyces capsulatus NAm1] gi|150414492|gb|EDN09854.1| hypothetical protein HCAG_05657 [Ajellomyces capsulatus NAm1] Length = 265 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 86/195 (44%), Positives = 130/195 (66%), Gaps = 2/195 (1%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G +A K GMT +++ G+RIP T+L LD QV+ H+TL KNGY AVQ+G G + Sbjct: 71 LRTGTLAIKKGMTAIFDLETGKRIPCTILQLDRVQVISHKTLKKNGYYAVQIGCGWKHER 130 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V++PM G F++ V+PK+ + EFRV+ ++ LLP+G + + ++F GQ VD + G G Sbjct: 131 AVTRPMLGHFAANGVAPKRHIHEFRVKDENGLLPIGEMINANWFQEGQYVDARSNSRGMG 190 Query: 120 FSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 F+G MKRH F G +HGVS++HR S + RV+ KKMAG MG +VT++NL+ Sbjct: 191 FAGVMKRHGFHGQDRSHGVSLTHRSMGSSGPGQGGGSRVYPGKKMAGNMGNKQVTLQNLK 250 Query: 179 VVSVDDKRGLILVKG 193 V+ VD ++G+++V G Sbjct: 251 VLKVDAEKGIVVVNG 265 >gi|195059563|ref|XP_001995662.1| GH17642 [Drosophila grimshawi] gi|193896448|gb|EDV95314.1| GH17642 [Drosophila grimshawi] Length = 373 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 72/229 (31%), Positives = 111/229 (48%), Gaps = 15/229 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49 R G++ARK+G ++ G R+ T+L + + V+ + ++ N Y V Sbjct: 109 RCGLIARKIGQYPLWLKNGERVRTTLLQVVDNHVIKYIPPEEYRPTQRPNVHHLNKYGCV 168 Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109 VGA ++K G F V PKK L F V L G+ + +F VG+ V Sbjct: 169 LVGAECTNPALLTKEYCGLFRDSGVMPKKNLARFIVSP-QAALAAGTPLNVGHFRVGEFV 227 Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169 DV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ KM G MG Sbjct: 228 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 287 Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217 +K L + ++ K ++ V+G VPG+ N + + D+ K Sbjct: 288 RWRIIKGLRIWRINTKYNVMWVQGSAVPGS-TNGLVYIYDTILPLRKPK 335 >gi|302337477|ref|YP_003802683.1| 50S ribosomal protein L3 [Spirochaeta smaragdinae DSM 11293] gi|301634662|gb|ADK80089.1| 50S ribosomal protein L3 [Spirochaeta smaragdinae DSM 11293] Length = 206 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 87/209 (41%), Positives = 124/209 (59%), Gaps = 5/209 (2%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT +++ G PVTV+ +++ V+ R +KNGY A +GA + K K+V+K Sbjct: 3 GLIGKKVGMTQIFDERGVLTPVTVIKIEDNVVIDKRDEEKNGYTASVIGAEDLKSKHVTK 62 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 P G F NV PK+ L E R + + VG F VDV G + GKG+ GA Sbjct: 63 PYGGQFPE-NVHPKRYLVEMRDFEAES--SVGETLGVGIFKEISFVDVVGTSKGKGYQGA 119 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKRH F G RATHG S HR G TG P +V K KM GRMG R TV+NL V+ VD Sbjct: 120 MKRHGFKGGRATHG-SKFHRGLGGTGMAATPSKVLKGAKMPGRMGAARTTVQNLRVIKVD 178 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +++ +++VKG +PG + S ++V+ + K Sbjct: 179 EEKQVLMVKGAIPGPCQ-SMVIVQKAKKK 206 >gi|321310980|ref|YP_004193309.1| 50S ribosomal protein L4 [Mycoplasma haemofelis str. Langford 1] gi|319802824|emb|CBY93470.1| ribosomal protein L3 [Mycoplasma haemofelis str. Langford 1] Length = 229 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 83/212 (39%), Positives = 122/212 (57%), Gaps = 6/212 (2%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 +V +KLGMT V++ G IPVT + ++ ++ +T++K+GY AV VG G K +SKP Sbjct: 4 IVGKKLGMTQVFSDSGTLIPVTAIEVEPNLILSLKTVEKDGYSAVVVGYGSVKETRLSKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGA 123 +RG F + ++ +FE R D L G + F VG LVDV+G+T G GF+GA Sbjct: 64 VRGQFQKKGLEVRRNIFELRNSSQDGLKE-GELLKVDSLFKVGDLVDVSGVTRGHGFTGA 122 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQD---PGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +K NF +HG HR GS + P +V+K KKMAGR G RV+ NLE+V Sbjct: 123 IKLWNFSCGPRSHGAGYPHRYQGSLETGRGGVSPQKVWKGKKMAGRYGCERVSQINLEIV 182 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD ++ L+ VKG V G + NS + ++ + + Sbjct: 183 YVDPEKNLLFVKGSVAG-RSNSIVRIKTTTRK 213 >gi|162450261|ref|YP_001612628.1| 50S ribosomal protein L3 [Sorangium cellulosum 'So ce 56'] gi|254803690|sp|A9FQE0|RL3_SORC5 RecName: Full=50S ribosomal protein L3 gi|161160843|emb|CAN92148.1| 50S ribosomal protein L3 [Sorangium cellulosum 'So ce 56'] Length = 232 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 111/211 (52%), Gaps = 4/211 (1%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G++ +K+GMT ++N G + TV+ C V+ RTL+K+GY A+ +G GE K+ +K Sbjct: 6 GIIGKKIGMTQIFNETGEVLRCTVVQAG-CVVIGKRTLEKDGYSALILGLGERAEKHTTK 64 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPS-YFTVGQLVDVTGMTIGKGFS 121 P+ G + +PK+ + E R + +G+ F VGQ VD G + G+GFS Sbjct: 65 PVAGAYKKSGQTPKRIVRELRCSPEHAAKYEIGTTLKVDEIFEVGQRVDAQGRSRGRGFS 124 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G ++R +F G +HG R GS G PGR KM G G V+ NL++ Sbjct: 125 GVIRRWSFAGAVNSHGTHEYFRHGGSIGTNMTPGRTLPGLKMPGHYGDETVSALNLKIAK 184 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + + LIL++G VPG KN + +R + K Sbjct: 185 LLPEDNLILIEGPVPGP-KNQVVTIRGAVKK 214 >gi|325117734|emb|CBZ53285.1| putative ribosomal protein L3p [Neospora caninum Liverpool] Length = 407 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 83/209 (39%), Positives = 118/209 (56%), Gaps = 8/209 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K+GM +++ G R VTV +D C V+ RTLDK+GY A +G G + V Sbjct: 153 RTGLLAYKIGMMSLWDGWGERHAVTVCQVDRCVVMEQRTLDKDGYEACVMGIGYQPIHKV 212 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KPM G + + PK ++ EF+ D LLPVG S +FT GQ V V+G + KG+ Sbjct: 213 TKPMLGVYIRSRIEPKSRIAEFKCSSDC-LLPVGHEMSVRHFTPGQHVFVSGWSKDKGYL 271 Query: 122 GAMKRHNFGGLRATHGVS-ISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G KR F G A+HGV +H S GS G + V++ KKMAG GG+ V N +V Sbjct: 272 GVKKRWGFAGQNASHGVEAKAHSSPGSIGQSKTVNVVWRFKKMAGHAGGDPRVV-NCKVF 330 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209 ++ +R LI +KG K S I + D+ Sbjct: 331 RIEAQRNLIFLKG-----YKGSLIKISDA 354 >gi|194376318|dbj|BAG62918.1| unnamed protein product [Homo sapiens] Length = 243 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 109/210 (51%), Gaps = 5/210 (2%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMA-VQVGAGEAKVKNVSKPMRGFF 69 M ++ +G++ VT+L + +C V+ + + + NG MA + VG + + F+ Sbjct: 1 MMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSRFRKATSILEFY 60 Query: 70 SSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129 + + PK+ + F + + + P G+ ++F GQ VDVT TIGKGF G MKR F Sbjct: 61 RELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGKGFQGVMKRWGF 119 Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLI 189 G ATHG + +HR G+ D GRV+ KM G+MG T L+V ++ K +I Sbjct: 120 KGQPATHGQTKTHRRPGAV-ATGDIGRVWPGTKMPGKMGNIYRTEYGLKVWRINTKHNII 178 Query: 190 LVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 V G VPG KN + V+DS A GK Sbjct: 179 YVNGSVPG-HKNCLVKVKDSKLPAYKDLGK 207 >gi|302824121|ref|XP_002993706.1| hypothetical protein SELMODRAFT_431753 [Selaginella moellendorffii] gi|300138430|gb|EFJ05198.1| hypothetical protein SELMODRAFT_431753 [Selaginella moellendorffii] Length = 222 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 82/209 (39%), Positives = 114/209 (54%), Gaps = 3/209 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 GV+ K+GM + +GR IPVTV+ + V +T +GY AVQVG + + Sbjct: 7 IGVMGTKVGMMTHFMPDGRAIPVTVIGFHEGNIVTQVKTEPTDGYNAVQVGYLRVRDTKL 66 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G + + P + L EFR+ D P + F VG LVDV+G +IGKGF Sbjct: 67 TKPELGHLNKIGTIPMRHLQEFRLVSVDGFEPSQRLNVEDIFKVGDLVDVSGKSIGKGFQ 126 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNF THG S SHR GS G PGRV+ KKM GRMG + ++ LE++ Sbjct: 127 GGIKRHNFKRGLMTHG-SKSHRQLGSIGAGTTPGRVYPGKKMPGRMGFQKTKIRKLEIIK 185 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 +D + +LVKG VPG + N + + + Sbjct: 186 IDPELRAVLVKGAVPGKRGN-LLRITPAK 213 >gi|239618265|ref|YP_002941587.1| ribosomal protein L3 [Kosmotoga olearia TBF 19.5.1] gi|259646550|sp|C5CGR4|RL3_KOSOT RecName: Full=50S ribosomal protein L3 gi|239507096|gb|ACR80583.1| ribosomal protein L3 [Kosmotoga olearia TBF 19.5.1] Length = 213 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 90/214 (42%), Positives = 125/214 (58%), Gaps = 8/214 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN-- 60 G++ RKLGMT +Y +G+ + VTV+ C VV +T Y A+Q+G E + Sbjct: 2 KGIIGRKLGMTTIY-EDGKALGVTVIKAGPCTVVQKKTAAGGEYNAIQLGFEELSPERAK 60 Query: 61 --VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 ++KP+ F + V P + L E RV+ D+ VG V F G+LVDVTG T G+ Sbjct: 61 KLLTKPILKKFEAAKVKPHRILKEIRVENPDE-YNVGDVIDAGIFKEGELVDVTGWTKGR 119 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF+GAMKR NFGG THG S HR GS G +P +++K KKM GR G RVTV N++ Sbjct: 120 GFTGAMKRWNFGGGEVTHG-SKFHRELGSVGNHTEPAKIWKGKKMPGRYGNERVTVLNVK 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VV VD + GLI + G VPGA + +++R + + Sbjct: 179 VVKVDAENGLIAIHGAVPGA-RGGLVIIRAAKRP 211 >gi|58584599|ref|YP_198172.1| 50S ribosomal protein L3 [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418915|gb|AAW70930.1| Ribosomal protein L3 [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 241 Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 99/215 (46%), Positives = 141/215 (65%), Gaps = 6/215 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ +G T +Y+ R+ VT+LHL +V R DK GY +V +G G K N+ Sbjct: 9 RIGLLMTNIGHTAIYS-NNSRVAVTLLHLSETYIVDVRRQDKCGYNSVILGIGNFK--NI 65 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP + + +S + KL+E R+ D + G ++F VGQ +D+T +IGKGF+ Sbjct: 66 AKPQLEYLKKMGISNRCKLYESRLS-DLSGIECGKKVGVNHFVVGQYLDITSYSIGKGFA 124 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF GLRA+HGVSI+HRS GSTG QDPGRVFK K+MAG +G +RVTV+N+E++S Sbjct: 125 GVMKRHNFCGLRASHGVSIAHRSQGSTGQCQDPGRVFKGKRMAGHLGSSRVTVQNMEILS 184 Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVN 215 +D I+VKG VPG KNS++ V+D+ K ++ Sbjct: 185 IDHGNSTIVVKGNNVPG-FKNSYVFVKDAIKKPLH 218 >gi|194700790|gb|ACF84479.1| unknown [Zea mays] Length = 230 Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 113/211 (53%), Gaps = 5/211 (2%) Query: 3 SGVVARKLGMTCVYN-IEGRRIPVTVLHL--DNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 GV+A K+GM ++ G+ +PVTV+ V +T +GY AVQVG + Sbjct: 13 VGVMATKVGMMTYFDPETGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVRED 72 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +++P G P + L EFR+ D P + F G L+DV+G +IGKG Sbjct: 73 KLTRPELGHLGKAGAPPLRHLQEFRLTAVDAFEPGQPLDFADLFKEGDLIDVSGNSIGKG 132 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KRHNF THG S SHR GS G PGRV+K KKM GRMGG + ++ L++ Sbjct: 133 FQGGIKRHNFKRGLMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKI 191 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V +D+ ++++KG VPG N + + + Sbjct: 192 VKIDNNLRVLMIKGAVPGKPGN-LLRITPAK 221 >gi|303282635|ref|XP_003060609.1| predicted protein [Micromonas pusilla CCMP1545] gi|226458080|gb|EEH55378.1| predicted protein [Micromonas pusilla CCMP1545] Length = 215 Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 79/209 (37%), Positives = 112/209 (53%), Gaps = 5/209 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLD-NCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 GV K GMT ++ +G +PVTV+ + V +T +GY AVQVG + + Sbjct: 5 VGVFGNKAGMTQLFMDDGLCVPVTVIAVQAGNVVTQVKTEGTDGYNAVQVGYDQVADYKI 64 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G + V P + L EFR+++ D P + F G +VDV G +IGKG+ Sbjct: 65 TKPEVGHCAKAGVPPMRHLEEFRLKEASDHAPGQQLKPSEMFKEGDVVDVRGTSIGKGWQ 124 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 GA+K++ F THG S SHR HGS G PGR+F KKM +MG VT + L+V+ Sbjct: 125 GAVKKYGFSRGLMTHG-SKSHRQHGSVGAGTSPGRIFPGKKMHSQMGNETVTARKLKVMR 183 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V + I+VKG VPG + N + V + Sbjct: 184 V--EDDCIIVKGSVPGKRGN-LLRVAPAK 209 >gi|2766503|gb|AAB95387.1| ribosomal protein L3 [Mycoplasma gallisepticum] Length = 236 Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 79/215 (36%), Positives = 112/215 (52%), Gaps = 8/215 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+ K+GMT V+ GR IPVT++ ++ QVV +T +K+GY AVQ+G + KN++ Sbjct: 2 KGIFGTKVGMTQVFEENGRLIPVTLVRVEPNQVVSVKTKEKDGYDAVQLGFNQTDEKNLN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121 KP G F N + K L E R VG + F GQ+VDV T G+GF+ Sbjct: 62 KPELGHFKKANTNNYKYLEEVRGMVG---YKVGDLLKVEELFQEGQVVDVQARTKGRGFT 118 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQD---PGRVFKNKKMAGRMGGNRVTVKNLE 178 GA+KR NF HG HR GS + RV K KKM+G G VT++NL Sbjct: 119 GAIKRWNFKIGSKGHGAGYPHRFQGSVQAGRGGSQAQRVMKGKKMSGHYGNELVTIQNLS 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +V + +++ G +PGA NS + + S K+ Sbjct: 179 IVGFLPEVSSVMISGAIPGAN-NSKVRITTSKKNP 212 >gi|24213439|ref|NP_710920.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Lai str. 56601] gi|45658703|ref|YP_002789.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|26454655|sp|Q9XD36|RL3_LEPIN RecName: Full=50S ribosomal protein L3 gi|73917494|sp|Q72NG1|RL3_LEPIC RecName: Full=50S ribosomal protein L3 gi|24194209|gb|AAN47938.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Lai str. 56601] gi|45601947|gb|AAS71426.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 206 Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 112/207 (54%), Gaps = 5/207 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GM+ +++ +G IPVTVL + C V ++++ +GY A+Q+ + K Sbjct: 1 MAKGLIGKKVGMSQIFDEQGNIIPVTVLEVGPCAVSQVKSVENDGYEAIQLAFQDIKEIQ 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119 SK + + + PKK L EFR D GSV F V +V VTG++ G+G Sbjct: 61 TSKAEKNHLAKAGLGPKKVLKEFRSFGDSP--TAGSVLKIQDVFAVSDVVKVTGVSKGRG 118 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 + G +KR + S HR GS G P RVFK K+ GR G + TV+NL+V Sbjct: 119 YQGVVKR-HGHAGGPGAHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQKTTVRNLKV 177 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILV 206 V +++++ L+ V G VPG N+ I + Sbjct: 178 VRINEEKNLLFVSGAVPGTA-NTVITI 203 >gi|166154743|ref|YP_001654861.1| 50S ribosomal protein L3 [Chlamydia trachomatis 434/Bu] gi|166155618|ref|YP_001653873.1| 50S ribosomal protein L3 [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301336017|ref|ZP_07224261.1| 50S ribosomal protein L3 [Chlamydia trachomatis L2tet1] gi|226725148|sp|B0B8A2|RL3_CHLT2 RecName: Full=50S ribosomal protein L3 gi|226725150|sp|B0BCG7|RL3_CHLTB RecName: Full=50S ribosomal protein L3 gi|165930731|emb|CAP04228.1| LSU ribosomal protein L3P [Chlamydia trachomatis 434/Bu] gi|165931606|emb|CAP07182.1| LSU ribosomal protein L3P [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 221 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 81/218 (37%), Positives = 112/218 (51%), Gaps = 11/218 (5%) Query: 1 MRSGV--VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK- 57 MRS + + +K GM V++ G + +V+ +D V +T +GY AVQ+GA + Sbjct: 1 MRSQLSLIGKKEGMMHVFDKNGNLVACSVISVDANVVAQLKTASSDGYNAVQIGADVVQA 60 Query: 58 -----VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111 K SK + G F + L E V ++ + +G F F VD+ Sbjct: 61 PEKTIEKRFSKALLGHFKKSGGRACRVLKEVVVSEEAVQSVSLGDEFGLEIFDGVSNVDI 120 Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171 G++ GKGF G MK+ F G +HG S HR GS G R PGR F K MG +R Sbjct: 121 CGISKGKGFQGVMKKFGFRGGPKSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGCDR 179 Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VTVKNLEVV VD R ++LVKG +PG K S ++V+ S Sbjct: 180 VTVKNLEVVKVDLDRKVMLVKGAIPG-FKGSVVVVKRS 216 >gi|258646053|ref|ZP_05733522.1| 50S ribosomal protein L3 [Dialister invisus DSM 15470] gi|260403423|gb|EEW96970.1| 50S ribosomal protein L3 [Dialister invisus DSM 15470] Length = 213 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 89/215 (41%), Positives = 133/215 (61%), Gaps = 5/215 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ KLGM+ V+ G +PVTV+ + VV +T++ +GY AVQ+G G K K+ Sbjct: 1 MSKAILGTKLGMSQVFAENGDLVPVTVVEVLPNVVVGVKTVETDGYNAVQIGYGAVKEKH 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +++P++G F + P K L E+R+ + + VG + F G+ VDV G++ GKGF Sbjct: 61 LTRPVKGQFEKAGIDPVKYLREYRLAEKPE-YTVGQTLAADIFAAGEFVDVIGISRGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD--PGRVFKNKKMAGRMGGNRVTVKNLE 178 +G +KR N +HG S +HR S G R G+VFK KKM G++GG+RVTV+NLE Sbjct: 120 AGTIKRWNHQRGPESHG-SKNHRQTASLGARMSGGGGKVFKGKKMPGQLGGDRVTVQNLE 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VV VD R ++LVKG +PGA K S ++V+ + KS+ Sbjct: 179 VVRVDTDRSILLVKGGIPGA-KGSLVMVKTAVKSS 212 >gi|269302431|gb|ACZ32531.1| ribosomal protein L3 [Chlamydophila pneumoniae LPCoLN] Length = 219 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 76/218 (34%), Positives = 113/218 (51%), Gaps = 11/218 (5%) Query: 1 MR--SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58 MR V+ +K GM +++ +G + +V+ ++ V +T + +GY ++Q+GA E Sbjct: 1 MRSHISVMGKKEGMIHIFDKDGSLVACSVIRVEPNVVAQIKTKESDGYFSLQMGAEEMNA 60 Query: 59 K------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111 VSKP G + L E R ++ + + +G F F VDV Sbjct: 61 PAHTITKRVSKPKLGHLRKAGGRVFRFLKEVRGSEEALNGVSLGDAFGLEVFEDVSSVDV 120 Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171 G++ GKGF G MK+ F G +HG S HR GS G R PGR F K MG Sbjct: 121 RGISKGKGFQGVMKKFGFRGGPGSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGAEN 179 Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VTVKNLEV+ VD ++ ++LVKG +PGA + S ++V+ S Sbjct: 180 VTVKNLEVIKVDLEKKVLLVKGAIPGA-RGSIVIVKHS 216 >gi|88658345|ref|YP_507227.1| 50S ribosomal protein L3 [Ehrlichia chaffeensis str. Arkansas] gi|88599802|gb|ABD45271.1| ribosomal protein L3 [Ehrlichia chaffeensis str. Arkansas] Length = 231 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 99/215 (46%), Positives = 146/215 (67%), Gaps = 5/215 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+ K+G T +++ EG+RIP+T+LHL + ++ +T D +GY AV +G N+ Sbjct: 4 RIGLFLEKVGHTAIFDNEGKRIPITLLHLRDSFIISKKTKDIHGYDAVVLGVEA--SINL 61 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP ++ K K+FE RV D++ G+ S ++F Q VD+TG ++GKGF+ Sbjct: 62 KKPQSKILEKSKITAKCKIFESRVDNLGDVVE-GAKVSITHFVKDQYVDITGYSLGKGFA 120 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKRHNF GL+A+HGVSI+HRS GSTG QDPGRV+K KKMAG++G ++VTV+NL+V+ Sbjct: 121 GVMKRHNFKGLKASHGVSIAHRSQGSTGQCQDPGRVYKGKKMAGQLGNSKVTVQNLKVIL 180 Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVN 215 VD +R L+ V+G +PGA K S++ V+D+ K +V Sbjct: 181 VDQERSLLGVRGNNIPGA-KGSYVFVKDAVKKSVP 214 >gi|298243968|ref|ZP_06967775.1| 50S ribosomal protein L3 [Ktedonobacter racemifer DSM 44963] gi|297557022|gb|EFH90886.1| 50S ribosomal protein L3 [Ktedonobacter racemifer DSM 44963] Length = 262 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 89/258 (34%), Positives = 125/258 (48%), Gaps = 52/258 (20%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M ++ RK+GMT V+ G IPVTV+ + C V +T+ ++GY AVQ+G E +K+ Sbjct: 1 MLDALLGRKVGMTQVFGQNGTVIPVTVIEVGPCIVTQVKTVARDGYEAVQIGFEETTLKH 60 Query: 61 VSKPMRGF----------FSSV-------------------------------------- 72 ++P G Sbjct: 61 STRPELGHLGHSLPLLKGQRKALQTHDQQAKSEENKEEEKQSKQVRKLLKIRENRQRRPG 120 Query: 73 -NVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129 + P K L E +Q+ DL + +G F+ S FT G++VD+ G+T GKGF G +KRH F Sbjct: 121 PELGPFKVLREVGLQEGVDLGSVELGHSFNASLFTDGEIVDIVGITKGKGFQGGVKRHGF 180 Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLI 189 G THG S R+ GS G PGRV K +MAGRMG RVTVK L++V D +R L+ Sbjct: 181 RGGPRTHGQSDRLRAPGSIGSGTTPGRVLKGTRMAGRMGNARVTVKKLQIVQSDPERNLL 240 Query: 190 LVKGCVPGAKKNSWILVR 207 +VKG VPGA + ++ Sbjct: 241 VVKGSVPGAN-GGLLTIK 257 >gi|195398797|ref|XP_002058007.1| GJ15729 [Drosophila virilis] gi|194150431|gb|EDW66115.1| GJ15729 [Drosophila virilis] Length = 372 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 72/229 (31%), Positives = 110/229 (48%), Gaps = 15/229 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49 R G++ARK+G ++ G R+ T+L + + VV + + + Y V Sbjct: 109 RCGLIARKIGQYPLWLKNGERVRTTLLQVVDNHVVKYIPPGEYTPAQRPRVKHLDRYGCV 168 Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109 VGA ++K G F V P K L F V L P G+ + +F VG+ V Sbjct: 169 LVGAESTNPALLTKEYCGIFRDSGVMPTKNLARFIVSPQAALAP-GTPLNVGHFRVGEFV 227 Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169 DV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ KM G MG Sbjct: 228 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKMPGHMGN 287 Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217 +K L + ++ K ++ V+G VPG+ N + + D+ K Sbjct: 288 RWRIIKGLRIWRINTKYNVMWVQGSAVPGS-TNGLVYIYDTVLPLRKPK 335 >gi|315186331|gb|EFU20092.1| 50S ribosomal protein L3 [Spirochaeta thermophila DSM 6578] Length = 198 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 85/201 (42%), Positives = 115/201 (57%), Gaps = 4/201 (1%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT V++ G +PVTV+ ++ VV RT +++GY A+ +GA K KP G F Sbjct: 1 MTQVFDANGYVVPVTVIKVEKNTVVDVRTPERHGYRALVLGAFPLKASRAVKPYLGQFQK 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 + PKK L E R + D G F + VDV G++ GKG+ G MKRH F G Sbjct: 61 RGLEPKKVLREIRDFEGD--YKPGDEIGVEIFEGVRFVDVRGLSKGKGYQGVMKRHGFSG 118 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 A+HG S HR+HGSTG P +V K KMAGRMGG +V V+NL +V VD +RG +LV Sbjct: 119 GPASHG-SKFHRAHGSTGQATYPAKVLKGTKMAGRMGGVQVCVQNLRIVEVDKERGCLLV 177 Query: 192 KGCVPGAKKNSWILVRDSFKS 212 +G VPG +K ++V + K Sbjct: 178 EGAVPGPRKG-VVIVTRAKKK 197 >gi|5163204|gb|AAD40583.1|AF115283_2 ribosomal protein L3 [Leptospira interrogans] Length = 206 Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 112/207 (54%), Gaps = 5/207 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GM+ +++ +G IPVTVL + C V ++++ +GY A+Q+ + K Sbjct: 1 MAKGLIGKKVGMSQIFDEQGNIIPVTVLEVGPCAVSQVKSVENDGYEAIQLAFQDIKEIQ 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119 SK + + + PKK L EFR D G+V F V +V VTG++ G+G Sbjct: 61 TSKAEKNHLAKAGLGPKKVLKEFRSFGDSP--TAGAVLKIQDVFAVSDVVKVTGVSKGRG 118 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 + G +KR + S HR GS G P RVFK K+ GR G + TV+NL+V Sbjct: 119 YQGVVKR-HGHAGGPGAHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQKTTVRNLKV 177 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILV 206 V +++++ L+ V G VPG N+ I + Sbjct: 178 VRINEEKNLLFVSGAVPGTA-NTVITI 203 >gi|31544255|ref|NP_852833.1| 50S ribosomal protein L3 [Mycoplasma gallisepticum str. R(low)] gi|33860197|sp|O52332|RL3_MYCGA RecName: Full=50S ribosomal protein L3 gi|31541099|gb|AAP56401.1| 50S ribosomal protein L3 [Mycoplasma gallisepticum str. R(low)] gi|284930294|gb|ADC30233.1| 50S ribosomal protein L3 [Mycoplasma gallisepticum str. R(high)] gi|284931061|gb|ADC30999.1| 50S ribosomal protein L3 [Mycoplasma gallisepticum str. F] Length = 236 Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats. Identities = 78/215 (36%), Positives = 112/215 (52%), Gaps = 8/215 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+ K+GMT V+ GR IPVT++ ++ QVV +T +K+GY AVQ+G + KN++ Sbjct: 2 KGIFGTKVGMTQVFEENGRLIPVTLVRVEPNQVVSVKTKEKDGYDAVQLGFNQTDEKNLN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121 KP G F N + K L E R +G + F GQ+VDV T G+GF+ Sbjct: 62 KPQLGHFKKANTNNYKYLEEVRGMVG---YKIGDLLKVEELFQEGQVVDVQARTKGRGFT 118 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQD---PGRVFKNKKMAGRMGGNRVTVKNLE 178 GA+KR NF HG HR GS + RV K KKM+G G VT++NL Sbjct: 119 GAIKRWNFKIGSKGHGAGYPHRFQGSVQAGRGGSQAQRVMKGKKMSGHYGNELVTIQNLS 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 +V + +++ G +PGA NS + + S K+ Sbjct: 179 IVGFLPEVSSVMISGAIPGAN-NSKVRITTSKKNP 212 >gi|89898720|ref|YP_515830.1| 50S ribosomal protein L3 [Chlamydophila felis Fe/C-56] gi|109893420|sp|Q252V3|RL3_CHLFF RecName: Full=50S ribosomal protein L3 gi|89332092|dbj|BAE81685.1| 50S ribosomal protein L3 [Chlamydophila felis Fe/C-56] Length = 221 Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats. Identities = 75/209 (35%), Positives = 109/209 (52%), Gaps = 10/209 (4%) Query: 1 MRSGV--VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58 MRS + + +K GM V++ +G + +V+ + V + +GY A+Q+GA E V Sbjct: 1 MRSQLSLMGKKEGMIHVFDKDGNLVACSVISMSPNVVSQIKVDSTDGYNAIQMGADEISV 60 Query: 59 K------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111 V+KP+ G F + L E RV +D + +GS F F VD+ Sbjct: 61 PEKTLQKRVNKPILGHFKKSGSRVFRTLKEVRVSEDAVNEASLGSEFGLEVFEDVSSVDI 120 Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171 +G++ GKGF G MK+ F G THG S HR GS G R PGR F K MG Sbjct: 121 SGVSKGKGFQGVMKKFGFRGGPKTHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGAVN 179 Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKK 200 VT+KNLEV+ +D ++ ++LVKG +PG + Sbjct: 180 VTIKNLEVIKIDLEKKVLLVKGAIPGPRG 208 >gi|194246733|ref|YP_002004372.1| 50S ribosomal protein L3 [Candidatus Phytoplasma mali] gi|254803686|sp|B3QZZ1|RL3_PHYMT RecName: Full=50S ribosomal protein L3 gi|193807090|emb|CAP18528.1| 50S ribosomal protein L3 [Candidatus Phytoplasma mali] Length = 219 Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats. Identities = 73/219 (33%), Positives = 129/219 (58%), Gaps = 9/219 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V++ +G IP+T++ + + ++ +++KNGY++ Q+G + K Sbjct: 1 MAKGILGRKIGMTQVFDEKGSLIPITIVDVSDNVILQQNSVEKNGYLSTQLGFSSKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFR----VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116 +KP G F + SPK+ + E R ++ + L +G+ + F G +VDV G++ Sbjct: 61 STKPALGHFKNAKTSPKRFIKEIRFLPGIKNELSELDLGTSLKTNLFQPGDIVDVIGISK 120 Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 GKGFSG++KRHN +HG S HR GS K KK+ G+MG VT++N Sbjct: 121 GKGFSGSIKRHNQSEGPKSHG-SRYHRRPGSM---GPIKGKIKGKKLPGQMGHQTVTLQN 176 Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 L++ S+D ++ L L+KG +PG +K +++++ + K+ + Sbjct: 177 LKINSIDHEQELFLIKGSIPGPRKG-FVMIKTAIKTVIK 214 >gi|227509931|ref|ZP_03939980.1| 50S ribosomal protein L3 [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227512864|ref|ZP_03942913.1| 50S ribosomal protein L3 [Lactobacillus buchneri ATCC 11577] gi|227522992|ref|ZP_03953041.1| 50S ribosomal protein L3 [Lactobacillus hilgardii ATCC 8290] gi|227083864|gb|EEI19176.1| 50S ribosomal protein L3 [Lactobacillus buchneri ATCC 11577] gi|227089810|gb|EEI25122.1| 50S ribosomal protein L3 [Lactobacillus hilgardii ATCC 8290] gi|227190537|gb|EEI70604.1| 50S ribosomal protein L3 [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 211 Score = 207 bits (528), Expect = 9e-52, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 113/212 (53%), Gaps = 5/212 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ +K+GMT V+ G +PVTV+ + ++ +T + +GY AVQ+G + + Sbjct: 3 RKGILGKKVGMTQVFTENGELVPVTVVEVTPNVIMQIKTAENDGYDAVQLGYADKRAVLT 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP +G N +PK+ + E + + V F G +VDVTG T G G+ Sbjct: 63 NKPEQGHAKKANTTPKRFIKEIK-DVELGDYKVAEEVKADIFKPGDIVDVTGTTKGHGYQ 121 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G + + THG S HR GS G RV K+ GRMG VT++NLEVVS Sbjct: 122 GNIHKDGQSRGPETHG-SRYHRRPGSLGVI--INRVVPGMKLPGRMGNKTVTIQNLEVVS 178 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 D+ +IL+KG VPGA K S+I +R + + A Sbjct: 179 TDNDNNVILIKGNVPGANK-SFITIRTAVRGA 209 >gi|286142684|gb|ADC41372.1| ribosomal protein L3 [Streptomyces californicus] gi|286142700|gb|ADC41380.1| ribosomal protein L3 [Streptomyces vinaceus] gi|286142714|gb|ADC41387.1| ribosomal protein L3 [Streptomyces floridae] gi|286142746|gb|ADC41403.1| ribosomal protein L3 [Streptomyces sp. CB157] gi|286142798|gb|ADC41429.1| ribosomal protein L3 [Streptomyces puniceus] Length = 167 Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats. Identities = 75/168 (44%), Positives = 100/168 (59%), Gaps = 1/168 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + + F G VDVTG + GKGF+G MKRHNF G Sbjct: 61 DVTPRRHLVELR-TPDASEYTLGQEVTAAVFESGVKVDVTGKSKGKGFAGVMKRHNFKGG 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +A+HG HR GS G PGRVFK +MAGRMG RVT +NL + Sbjct: 120 KASHGAHRVHRMPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIH 167 >gi|71276484|ref|ZP_00652759.1| Ribosomal protein L3 [Xylella fastidiosa Dixon] gi|71162661|gb|EAO12388.1| Ribosomal protein L3 [Xylella fastidiosa Dixon] Length = 186 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 86/186 (46%), Positives = 114/186 (61%), Gaps = 2/186 (1%) Query: 27 VLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ 86 ++ +VV +T D +GY A+QV G + V+KP G F+ V + L+EFRV+ Sbjct: 1 LIEATANRVVQIKTSDVDGYDAIQVTVGSRRSVLVNKPESGHFAKAKVEAGRGLWEFRVE 60 Query: 87 KDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145 K VGS S F VGQ VD+ G+T GKGF G +KRHNF ATHG S+SHR+ Sbjct: 61 KTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGFQGTIKRHNFRMGDATHGNSLSHRAP 120 Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWIL 205 GS G RQ PGRVF KKM+G MG R +V+NLEV+ +D +R LI V+G +PGA +L Sbjct: 121 GSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEVIKIDVERFLIAVRGAIPGASGGD-VL 179 Query: 206 VRDSFK 211 +R + K Sbjct: 180 IRSASK 185 >gi|293977931|ref|YP_003543361.1| 50S ribosomal protein L3P [Candidatus Sulcia muelleri DMIN] gi|292667862|gb|ADE35497.1| LSU ribosomal protein L3P [Candidatus Sulcia muelleri DMIN] Length = 206 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 79/206 (38%), Positives = 129/206 (62%), Gaps = 5/206 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ + +GMT +Y+ G +P +++ C V+ +T +K+GY + Q+G E K KN + Sbjct: 2 SGIIGKNIGMTSMYDESGFNVPCSIIEAGPCIVLQIKTKEKDGYDSCQLGFDEKKYKNTN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ FF +PKKK+FEF ++ + + G++ ++F +LV++TG + GKGF G Sbjct: 62 KPLLFFFKKFKSTPKKKIFEFPIKGN---IKSGNIIKLNFFHENELVNITGFSKGKGFQG 118 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH F G +HG R+ GS G DP RVFK +MAGRMG +VT+KN +++ Sbjct: 119 VVKRHGFSGVGERSHGQHNRSRAPGSIGAGSDPSRVFKGTRMAGRMGNKKVTLKNRKILK 178 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 +D +++KG VPGA KNS+++++ Sbjct: 179 IDLLNNFLIIKGSVPGA-KNSYLIIK 203 >gi|286142694|gb|ADC41377.1| ribosomal protein L3 [Streptomyces griseobrunneus] gi|286142698|gb|ADC41379.1| ribosomal protein L3 [Streptomyces bacillaris] gi|286142710|gb|ADC41385.1| ribosomal protein L3 [Kitasatospora mediocidica] gi|286142716|gb|ADC41388.1| ribosomal protein L3 [Streptomyces roseochromogenes] Length = 167 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 77/168 (45%), Positives = 99/168 (58%), Gaps = 1/168 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDNDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVELR-TPDASEYTLGQEVTADVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 A HG HRS GS G PGRVFK +MAGRMG RVT +NL + Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIH 167 >gi|71029452|ref|XP_764369.1| 60S ribosomal protein L3 [Theileria parva strain Muguga] gi|68351323|gb|EAN32086.1| 60S ribosomal protein L3, putative [Theileria parva] Length = 347 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 83/210 (39%), Positives = 119/210 (56%), Gaps = 4/210 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 RSGV+A K+G +++ G R VTV H+D C V+ RT++KNGY A+Q+G G +K Sbjct: 88 RSGVLAYKIGCMSLWDDWGVRHAVTVCHVDRCVVLEKRTIEKNGYEALQLGLGYKNIKQQ 147 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SKP G F + K + EF+ D LLP G FS +FT GQ V V+G + KGF Sbjct: 148 SKPNIGRFIKLGTGSKNHIAEFKCSSDC-LLPEGHYFSVRHFTPGQWVFVSGWSKAKGFK 206 Query: 122 GAMKRHNFGGLRATHGVS-ISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GAM+R +FGG +HG +H + GS + V++N KM G +G + V N V Sbjct: 207 GAMRRWSFGGQNQSHGTECKAHSAPGSISQGKSVHIVWRNTKMGGHVGPDPR-VTNCRVF 265 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 ++ R LI +KG +PG + S + +RD+ Sbjct: 266 RIETHRNLIFLKGAIPG-EIGSVVKIRDAL 294 >gi|255348905|ref|ZP_05380912.1| 50S ribosomal protein L3 [Chlamydia trachomatis 70] gi|255503445|ref|ZP_05381835.1| 50S ribosomal protein L3 [Chlamydia trachomatis 70s] gi|255507124|ref|ZP_05382763.1| 50S ribosomal protein L3 [Chlamydia trachomatis D(s)2923] gi|289525573|emb|CBJ15051.1| LSU ribosomal protein L3P [Chlamydia trachomatis Sweden2] gi|296435133|gb|ADH17311.1| 50S ribosomal protein L3 [Chlamydia trachomatis E/150] gi|296438853|gb|ADH21006.1| 50S ribosomal protein L3 [Chlamydia trachomatis E/11023] Length = 221 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 82/218 (37%), Positives = 113/218 (51%), Gaps = 11/218 (5%) Query: 1 MRSGV--VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK- 57 MRS + + +K GM V++ G + +V+ +D V +T +GY AVQ+GA + Sbjct: 1 MRSQLSLIGKKEGMMHVFDKNGNLVACSVISVDANVVAQLKTASSDGYNAVQMGADVVQA 60 Query: 58 -----VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111 K SK + G F + L E V ++ + +G F F VD+ Sbjct: 61 PEKTIEKRFSKALLGHFKKSGGRACRVLKEVVVSEEAVQSVSLGDEFGLEIFDGVSNVDI 120 Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171 G++ GKGF G MK+ F G +HG S HR GSTG R PGR F K MG +R Sbjct: 121 CGISKGKGFQGVMKKFGFRGGPKSHG-SGFHRHAGSTGMRSTPGRCFPGSKRPSHMGCDR 179 Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VTVKNLEVV VD R ++LVKG +PG K S ++V+ S Sbjct: 180 VTVKNLEVVKVDLDRKVMLVKGAIPG-FKGSVVVVKRS 216 >gi|168034315|ref|XP_001769658.1| predicted protein [Physcomitrella patens subsp. patens] gi|162679007|gb|EDQ65459.1| predicted protein [Physcomitrella patens subsp. patens] Length = 223 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 77/209 (36%), Positives = 110/209 (52%), Gaps = 3/209 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 G++ K+GM + +G +P TV+ + V +T +GY AVQVG + + + Sbjct: 8 VGLMGTKMGMMTYFTEDGIAVPCTVVGFHEGNIVTQVKTDATDGYTAVQVGYRRVRDRKL 67 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G + V P + L EFRV + P + F G L+DV G +IGKGF Sbjct: 68 TKPQLGHLNKVGAIPMRHLQEFRVVSAEGFEPNQRLQLEEMFKAGDLIDVVGDSIGKGFQ 127 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR+NF + THG S S R GS G PGRV+ KKM G+MG R V+ LE+V Sbjct: 128 GGIKRYNFARGQMTHG-SKSKRQLGSIGAGTTPGRVYPGKKMPGQMGSGRTKVRKLEIVK 186 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 VD + +L+KG VPG N + + + Sbjct: 187 VDPELRAVLIKGSVPGKPGN-LLRITPAK 214 >gi|84997293|ref|XP_953368.1| 50S ribosomal protein L3 [Theileria annulata strain Ankara] gi|65304364|emb|CAI76743.1| 50S ribosomal protein L3, putative [Theileria annulata] Length = 347 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 81/210 (38%), Positives = 118/210 (56%), Gaps = 4/210 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 RSGV+A K+G +++ G R VTV +D C V+ RT++K+GY A+Q+G G +K Sbjct: 88 RSGVLAYKIGCMSLWDDWGVRHAVTVCQVDRCVVLEKRTIEKHGYEALQLGLGYKNIKQQ 147 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SKP G F + K + EF+ D LLP G FS +FT GQ V V+G + KGF Sbjct: 148 SKPNIGRFIKLGTGSKNHIAEFKCSSD-CLLPEGHYFSVRHFTPGQWVFVSGWSKAKGFK 206 Query: 122 GAMKRHNFGGLRATHGVS-ISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GAM+R +FGG +HG +H + GS + V++N KM G +G + V N V Sbjct: 207 GAMRRWSFGGQNQSHGTECKAHSAPGSISQGKSVHIVWRNTKMGGHVGPDPR-VTNCRVF 265 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 ++ R LI +KG +PG + S + +RD+ Sbjct: 266 RIETHRNLIFLKGAIPG-EIGSVVKIRDAL 294 >gi|307189923|gb|EFN74159.1| 39S ribosomal protein L3, mitochondrial [Camponotus floridanus] Length = 370 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 65/231 (28%), Positives = 115/231 (49%), Gaps = 17/231 (7%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYM-------------- 47 R+G++A+K+G+ ++ +G+++ T+L + + +VV + +K + Sbjct: 102 RTGLIAKKIGVYPLWLKDGKKVSSTLLQIVDNEVVKYMPPEKFHPVRSCKPPLQIKRRLG 161 Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107 + VGA + V+K G F V PK+ L F + + L P G+ ++F G+ Sbjct: 162 CLVVGAENIDPQWVTKEYYGMFKDTGVIPKRVLRRFIISPEAALQP-GTPLIAAHFKPGE 220 Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167 +VD+ TI +GF G MKR F G+ A+HGV+ +HR G+ G RV KM G M Sbjct: 221 IVDIRAKTIDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGRKARVMPGTKMPGHM 280 Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217 G + +++ ++ K +I +KG +PG + NS+ + D+ K Sbjct: 281 GNKWRVHRGQQILRINTKYNIIWIKGQNIPG-EINSYCHIYDTILPLRRHK 330 >gi|195133722|ref|XP_002011288.1| GI16081 [Drosophila mojavensis] gi|193907263|gb|EDW06130.1| GI16081 [Drosophila mojavensis] Length = 369 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 72/230 (31%), Positives = 110/230 (47%), Gaps = 15/230 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49 R GV+ARK+G ++ G RI T+L + + V+ + ++ N Y V Sbjct: 105 RCGVIARKIGQYPLWLKNGERIRTTLLQVVDNHVIKYIPPEEYKPTQRPNVHNLNRYGCV 164 Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109 VGA ++K G F V P K L F V L P G+ + +F VG+ V Sbjct: 165 LVGAESTNPAQLTKEYCGIFRDSGVMPTKNLARFIVSPQAALAP-GTPLNVGHFRVGEFV 223 Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169 DV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ K+ G MG Sbjct: 224 DVRGKTVYHGFQGVVKRHGFKGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKLPGHMGN 283 Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCKG 218 K L + ++ K ++ V+G VPG+ N + + D+ + Sbjct: 284 RWRISKGLRIWRINTKYNVMWVQGSAVPGS-TNGLVYIYDTILPLRKPQA 332 >gi|283780374|ref|YP_003371129.1| 50S ribosomal protein L3 [Pirellula staleyi DSM 6068] gi|283438827|gb|ADB17269.1| ribosomal protein L3 [Pirellula staleyi DSM 6068] Length = 232 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 86/233 (36%), Positives = 129/233 (55%), Gaps = 25/233 (10%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT +Y+ G IPVTV+ C+V+ +TL+++GY AVQ+G + + Sbjct: 1 MTKGILGRKVGMTQIYDEAGNAIPVTVVEAGPCRVLQLKTLERDGYEAVQLGFLDKPRRL 60 Query: 61 VSKPMRGFFSSVN-------------------VSPKKKLFEFRVQKDDDLLPVGSVFSPS 101 S+ RG +++ PK+ + EFR D VG + Sbjct: 61 ASRSERGHVAALESKRAKRRAAAGVVAVAKAACEPKRFVREFRGSADG--FTVGQDVTVE 118 Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP---GRVF 158 + VDVTG++ G+GFSGAMKRHNF G RATHGV HR G TG GR+ Sbjct: 119 ALEGVKAVDVTGISKGRGFSGAMKRHNFAGQRATHGVKKVHRHMGGTGALASNRGGGRMK 178 Query: 159 KNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 K KKM G+ G R+T +N+++V VD + L+L+ G VPG + + +++R++ K Sbjct: 179 KGKKMPGQYGSARITTRNIKLVRVDKENNLLLINGPVPGPQ-GAMVIIRETNK 230 >gi|258620527|ref|ZP_05715565.1| 50S ribosomal protein L3 [Vibrio mimicus VM573] gi|258587406|gb|EEW12117.1| 50S ribosomal protein L3 [Vibrio mimicus VM573] Length = 167 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 72/161 (44%), Positives = 100/161 (62%), Gaps = 1/161 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV AG K V+ Sbjct: 2 IGLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF G Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLENGEE-FAVGSELTVELFNEVKKVDVTGTSKGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 A+KR NF THG S+SHR+ GS G Q PGRVFK KK+ Sbjct: 121 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKI 161 >gi|330444113|ref|YP_004377099.1| 50S ribosomal protein L3 [Chlamydophila pecorum E58] gi|328807223|gb|AEB41396.1| ribosomal protein L3 [Chlamydophila pecorum E58] Length = 215 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 116/215 (53%), Gaps = 9/215 (4%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK----- 59 ++ +K GM V++ +G + +V+ ++ V +TL+K+GY ++Q+G+G+ Sbjct: 3 LMGKKEGMLHVFDKDGSLVACSVISIEPNVVTQIKTLEKDGYTSLQMGSGKESAPLKTLQ 62 Query: 60 -NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 +K G + L E RV ++ +G+ F F VDV+G++ G Sbjct: 63 KRYTKAKLGHLKKSRDQVFRVLKEVRVSEEVIGSTSLGAAFGIEVFEGVGAVDVSGVSKG 122 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF G MK++ F G +HG S HR GS G R PGR F K MG VT+KNL Sbjct: 123 KGFQGVMKKYGFRGGPGSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGSENVTIKNL 181 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 EV+ +D +R ++LVKG +PG+ K S ++V+ S ++ Sbjct: 182 EVIKIDLERKVLLVKGAIPGS-KGSVVVVKRSSRA 215 >gi|15605257|ref|NP_220043.1| 50S ribosomal protein L3 [Chlamydia trachomatis D/UW-3/CX] gi|76789265|ref|YP_328351.1| 50S ribosomal protein L3 [Chlamydia trachomatis A/HAR-13] gi|237802957|ref|YP_002888151.1| 50S ribosomal protein L3 [Chlamydia trachomatis B/Jali20/OT] gi|237804879|ref|YP_002889033.1| 50S ribosomal protein L3 [Chlamydia trachomatis B/TZ1A828/OT] gi|255311346|ref|ZP_05353916.1| 50S ribosomal protein L3 [Chlamydia trachomatis 6276] gi|255317647|ref|ZP_05358893.1| 50S ribosomal protein L3 [Chlamydia trachomatis 6276s] gi|7674297|sp|O84533|RL3_CHLTR RecName: Full=50S ribosomal protein L3 gi|109893421|sp|Q3KLG9|RL3_CHLTA RecName: Full=50S ribosomal protein L3 gi|3328965|gb|AAC68129.1| L3 Ribosomal Protein [Chlamydia trachomatis D/UW-3/CX] gi|76167795|gb|AAX50803.1| LSU ribosomal protein L3P [Chlamydia trachomatis A/HAR-13] gi|231273179|emb|CAX10092.1| LSU ribosomal protein L3P [Chlamydia trachomatis B/TZ1A828/OT] gi|231274191|emb|CAX10985.1| LSU ribosomal protein L3P [Chlamydia trachomatis B/Jali20/OT] gi|296436061|gb|ADH18235.1| 50S ribosomal protein L3 [Chlamydia trachomatis G/9768] gi|296436989|gb|ADH19159.1| 50S ribosomal protein L3 [Chlamydia trachomatis G/11222] gi|296437922|gb|ADH20083.1| 50S ribosomal protein L3 [Chlamydia trachomatis G/11074] gi|297140422|gb|ADH97180.1| 50S ribosomal protein L3 [Chlamydia trachomatis G/9301] gi|297748658|gb|ADI51204.1| LSU ribosomal protein L3P [Chlamydia trachomatis D-EC] gi|297749538|gb|ADI52216.1| LSU ribosomal protein L3P [Chlamydia trachomatis D-LC] Length = 221 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 82/218 (37%), Positives = 113/218 (51%), Gaps = 11/218 (5%) Query: 1 MRSGV--VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK- 57 MRS + + +K GM V++ G + +V+ +D V +T +GY AVQ+GA + Sbjct: 1 MRSQLSLIGKKEGMMHVFDKNGNLVACSVISVDANVVAQLKTASSDGYNAVQMGADVVQA 60 Query: 58 -----VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111 K SK + G F + L E V ++ + +G F F VD+ Sbjct: 61 PEKTIEKRFSKALLGHFKKSGGRVCRVLKEVVVSEEAVQSVSLGDEFGLEIFDGVSNVDI 120 Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171 G++ GKGF G MK+ F G +HG S HR GSTG R PGR F K MG +R Sbjct: 121 CGISKGKGFQGVMKKFGFRGGPKSHG-SGFHRHAGSTGMRSTPGRCFPGSKRPSHMGCDR 179 Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 VTVKNLEVV VD R ++LVKG +PG K S ++V+ S Sbjct: 180 VTVKNLEVVKVDLDRKVMLVKGAIPG-FKGSVVVVKRS 216 >gi|286142602|gb|ADC41331.1| ribosomal protein L3 [Streptomyces griseus] gi|286142606|gb|ADC41333.1| ribosomal protein L3 [Streptomyces griseus] gi|286142612|gb|ADC41336.1| ribosomal protein L3 [Streptomyces griseus] gi|286142614|gb|ADC41337.1| ribosomal protein L3 [Streptomyces griseus] gi|286142616|gb|ADC41338.1| ribosomal protein L3 [Streptomyces griseus] gi|286142660|gb|ADC41360.1| ribosomal protein L3 [Streptomyces griseus] gi|286142662|gb|ADC41361.1| ribosomal protein L3 [Streptomyces griseus] gi|286142664|gb|ADC41362.1| ribosomal protein L3 [Streptomyces griseus] gi|286142668|gb|ADC41364.1| ribosomal protein L3 [Streptomyces griseus] gi|286142672|gb|ADC41366.1| ribosomal protein L3 [Streptomyces griseus] gi|286142674|gb|ADC41367.1| ribosomal protein L3 [Streptomyces griseus] gi|286142676|gb|ADC41368.1| ribosomal protein L3 [Streptomyces griseus] gi|286142678|gb|ADC41369.1| ribosomal protein L3 [Streptomyces griseus] gi|286142680|gb|ADC41370.1| ribosomal protein L3 [Streptomyces griseus] gi|286142682|gb|ADC41371.1| ribosomal protein L3 [Streptomyces sp. DSM 40932] gi|286142688|gb|ADC41374.1| ribosomal protein L3 [Streptomyces anulatus] gi|286142690|gb|ADC41375.1| ribosomal protein L3 [Streptomyces reticuli] gi|286142750|gb|ADC41405.1| ribosomal protein L3 [Streptomyces griseus] gi|286142752|gb|ADC41406.1| ribosomal protein L3 [Streptomyces griseus] gi|286142762|gb|ADC41411.1| ribosomal protein L3 [Streptomyces griseus] gi|286142764|gb|ADC41412.1| ribosomal protein L3 [Streptomyces griseus] gi|286142770|gb|ADC41415.1| ribosomal protein L3 [Streptomyces griseus] gi|286142772|gb|ADC41416.1| ribosomal protein L3 [Streptomyces griseus] gi|286142774|gb|ADC41417.1| ribosomal protein L3 [Streptomyces griseus] gi|286142776|gb|ADC41418.1| ribosomal protein L3 [Streptomyces griseus] gi|286142778|gb|ADC41419.1| ribosomal protein L3 [Streptomyces griseus] gi|286142780|gb|ADC41420.1| ribosomal protein L3 [Streptomyces griseus] gi|286142790|gb|ADC41425.1| ribosomal protein L3 [Streptomyces sp. E1002] Length = 167 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 77/168 (45%), Positives = 99/168 (58%), Gaps = 1/168 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVELR-TPDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 A HG HRS GS G PGRVFK +MAGRMG RVT +NL + Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIH 167 >gi|255085138|ref|XP_002505000.1| ribosomal protein L3, chloroplast precursor [Micromonas sp. RCC299] gi|226520269|gb|ACO66258.1| ribosomal protein L3, chloroplast precursor [Micromonas sp. RCC299] Length = 276 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 80/209 (38%), Positives = 112/209 (53%), Gaps = 5/209 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLD-NCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 GV K GMT ++ EG IPV+V+ + V +T+D +GY AVQV E + Sbjct: 66 VGVFGNKAGMTQIFTDEGLCIPVSVIAVQKGNVVTQVKTVDTDGYNAVQVAYDEVADYKI 125 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G + V+P + L EFR+ + + FT G LVDV G +IGKG+ Sbjct: 126 TKPEVGHCAKAGVAPMRHLEEFRLAQAPAHELGQQLKPSEMFTAGDLVDVRGASIGKGWQ 185 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 GA+K++ F THG S SHR HGS G PGR++ KKM +MG VT + L+VV Sbjct: 186 GAVKKYGFSRGLMTHG-SKSHRQHGSVGAGTTPGRIYPGKKMHSQMGNETVTARKLKVVK 244 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V + I+VKG VPG + N + + + Sbjct: 245 V--EDDCIIVKGSVPGKRGN-LLRIAPAK 270 >gi|28493521|ref|NP_787682.1| 50S ribosomal protein L3 [Tropheryma whipplei str. Twist] gi|28572367|ref|NP_789147.1| 50S ribosomal protein L3 [Tropheryma whipplei TW08/27] gi|42559617|sp|Q83FY6|RL3_TROWT RecName: Full=50S ribosomal protein L3 gi|42559618|sp|Q83I78|RL3_TROW8 RecName: Full=50S ribosomal protein L3 gi|28410498|emb|CAD66884.1| 50S ribosomal protein L3 [Tropheryma whipplei TW08/27] gi|28476563|gb|AAO44651.1| 50S ribosomal protein L3 [Tropheryma whipplei str. Twist] Length = 210 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 84/213 (39%), Positives = 123/213 (57%), Gaps = 9/213 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDN-CQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M ++ K+GMT +++ GRR+ V + +K+GY +Q+ G + Sbjct: 1 MARALLGTKVGMTQIWS--GRRVVPVTAVAVTTNVVSQVKAPEKDGYSRLQIATGAIDPR 58 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V++P +G F+ ++P++ + E D +G F P F GQLVDV G + GKG Sbjct: 59 RVNRPRKGHFAKAGLTPRRFIREV-----DSEGSLGDEFGPEIFQEGQLVDVVGKSKGKG 113 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 FSG MKRHNF G+ ATHG +HR GS G P RVFK +MAGR+G +RVTV NL + Sbjct: 114 FSGTMKRHNFQGVSATHGSHRNHRKPGSVGASSTPSRVFKGTRMAGRLGSSRVTVHNLRL 173 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 V +D + GL+LV+G VPG+ S +++RD+ K Sbjct: 174 VKIDSENGLLLVEGAVPGSS-GSPVIIRDAVKG 205 >gi|322799942|gb|EFZ21068.1| hypothetical protein SINV_02593 [Solenopsis invicta] Length = 366 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 64/237 (27%), Positives = 117/237 (49%), Gaps = 21/237 (8%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQ----------- 50 R+G++A+K+G+ ++ G+++ T+L + + +VV + +K Y V+ Sbjct: 99 RTGLIAKKIGVYPLWLKNGKKVTSTLLQIVDNEVVKYIPPEK--YNPVKSKRPPIQVKKR 156 Query: 51 -----VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105 VGA + ++K F+ V PK+ L F + + L P G+ ++F Sbjct: 157 RGCLVVGAENINPQLITKEYYSIFNDTGVMPKRVLRRFVISPEAALQP-GTPLFATHFKP 215 Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165 G++VD+ G T+ +GF G MKR F G A+HG + +HR G+ G RV KM G Sbjct: 216 GEVVDIRGKTVDRGFQGVMKRWGFHGQPASHGQTKTHRRPGNIGSGGTKARVMPGTKMPG 275 Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCKGKVS 221 MG ++ + ++ ++ K +I V G +PG + N+++ + D+ K K + Sbjct: 276 HMGNRWRILRGVRILRINTKYNVIWVLGHNLPG-ETNNYVYMYDTLLPLRQFKTKPN 331 >gi|286142754|gb|ADC41407.1| ribosomal protein L3 [Streptomyces sp. CB169] gi|286142756|gb|ADC41408.1| ribosomal protein L3 [Streptomyces sp. CB170] Length = 167 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 77/168 (45%), Positives = 101/168 (60%), Gaps = 1/168 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNFGGL Sbjct: 61 DVTPRRHLVEIRTS-DASEYTLGQELTAETFESGVKVDVTGKSKGKGFAGVMKRHNFGGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 ++HG HRS GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 GSSHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167 >gi|51244976|ref|YP_064860.1| 50S ribosomal protein L3 [Desulfotalea psychrophila LSv54] gi|81826871|sp|Q6AP71|RL3_DESPS RecName: Full=50S ribosomal protein L3 gi|50876013|emb|CAG35853.1| probable 50S ribosomal protein L3 [Desulfotalea psychrophila LSv54] Length = 209 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 82/208 (39%), Positives = 110/208 (52%), Gaps = 4/208 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 G++ + +GMT VY G+ IPVTV+ C+V+ +T +GY AVQVG K V Sbjct: 4 TMGILGKNIGMTRVYGEVGQAIPVTVVQAGPCKVLQVKTNATDGYNAVQVGFENKKSSRV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGF 120 +K G F+ + + EFRV D VG + S F G +VDV G + G+GF Sbjct: 64 NKAEAGHFAKSDSEGFYFVREFRVV-DPATYNVGDMISVDALFKAGDIVDVQGTSKGRGF 122 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G +KR F G S HR+ GS GC PGRV K KKM GRMG + V KN+ VV Sbjct: 123 QGVIKRWGFKGGPGG-HGSKHHRAPGSIGCSAYPGRVVKGKKMPGRMGNDTVLKKNVTVV 181 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208 V ++L+KG +PGA KN + + Sbjct: 182 DVRIDENVVLLKGPMPGA-KNGLLKIYS 208 >gi|286142594|gb|ADC41327.1| ribosomal protein L3 [Streptomyces platensis] Length = 167 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 74/168 (44%), Positives = 99/168 (58%), Gaps = 1/168 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ C V RT D++GY +VQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDQDGYDSVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRH F G Sbjct: 61 DVTPRRHLVEVR-TADAGEYTLGQELTAETFESGVKVDVTGKSKGKGFAGVMKRHGFHGG 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +A+HG HR GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 KASHGAHRVHRKPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTVH 167 >gi|286142608|gb|ADC41334.1| ribosomal protein L3 [Streptomyces platensis] Length = 167 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 74/168 (44%), Positives = 99/168 (58%), Gaps = 1/168 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ C V RT D++GY +VQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDQDGYDSVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRH F G Sbjct: 61 DVTPRRHLVEVRTT-DAGEYTLGQELTAETFESGVKVDVTGKSKGKGFAGVMKRHGFHGG 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +A+HG HR GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 KASHGAHRVHRKPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTVH 167 >gi|156553318|ref|XP_001600461.1| PREDICTED: similar to Mitochondrial 39S ribosomal protein L3 [Nasonia vitripennis] Length = 375 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 14/230 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQ----------- 50 R GV+ARK+G+ ++ +G+++ T+ + + V+ + ++ M Q Sbjct: 105 RVGVLARKIGIVPMWMKDGKKVLTTMFQVADNHVIKYIPPEEYKPMITQKKNPLPRNTGC 164 Query: 51 --VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQL 108 VGA + +K G F+ V PK+ L F V + L P G+ +++ +GQ Sbjct: 165 LLVGADSCDPQLFTKEYCGLFNEAGVMPKRLLARFHVSPEGALQP-GTPLFATHYKIGQY 223 Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168 +D+ G TI +GF G MKR F G+ A+HGV+ +HR G+ G RV K+ G MG Sbjct: 224 IDIRGKTIDRGFQGVMKRWGFHGMPASHGVTKTHRRPGNIGSGGKKARVMPGTKLPGHMG 283 Query: 169 GNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 VK +V ++ + +I V G + NS + D+ CK Sbjct: 284 NRYRIVKAQRIVRINTRYNVIWVLGQASAGETNSLVQFYDTIVPLKTCKA 333 >gi|286142802|gb|ADC41431.1| ribosomal protein L3 [Streptomyces mashuensis] Length = 167 Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats. Identities = 77/168 (45%), Positives = 99/168 (58%), Gaps = 1/168 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPCIVTQVRTNDTDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVEIR-TADASEYTLGQELTAEVFEAGVKVDVTGKSKGKGFAGVMKRHNFRGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 A HG HRS GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167 >gi|313847648|emb|CBY16636.1| putative 50s ribosomal protein [Chlamydophila psittaci RD1] gi|325507077|gb|ADZ18715.1| 50S ribosomal protein L3 [Chlamydophila psittaci 6BC] gi|328914285|gb|AEB55118.1| ribosomal protein L3 [Chlamydophila psittaci 6BC] Length = 221 Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 75/209 (35%), Positives = 110/209 (52%), Gaps = 10/209 (4%) Query: 1 MRSGV--VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58 MRS + + +K GM V++ +G + +V+ + + V + +GY A+Q+GA E V Sbjct: 1 MRSQLSLMGKKEGMIHVFDKDGNLVACSVISMSSNVVTQIKVDSTDGYNAIQMGANEINV 60 Query: 59 K------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111 V+KP G F + L E R+ ++ + + +GS F F VD+ Sbjct: 61 PEKTLQKRVNKPSLGHFKKSGSRVFRSLKEVRLSEEAVNEVSLGSEFGLEVFESVSSVDI 120 Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171 +G++ GKGF G MKR F G +HG S HR GS G R PGR F K MG Sbjct: 121 SGVSKGKGFQGVMKRFGFRGGPQSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGTVN 179 Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKK 200 VTVKNLEV+ VD ++ ++LVKG +PG + Sbjct: 180 VTVKNLEVIKVDLEKKVLLVKGAIPGPRG 208 >gi|286142696|gb|ADC41378.1| ribosomal protein L3 [Streptomyces microflavus] gi|286142702|gb|ADC41381.1| ribosomal protein L3 [Streptomyces microflavus] gi|286142704|gb|ADC41382.1| ribosomal protein L3 [Streptomyces alboviridis] gi|286142706|gb|ADC41383.1| ribosomal protein L3 [Streptomyces microflavus] gi|286142712|gb|ADC41386.1| ribosomal protein L3 [Streptomyces albidus] Length = 167 Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 78/168 (46%), Positives = 100/168 (59%), Gaps = 1/168 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVELR-TPDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 A HGV HRS GS G PGRVFK +MAGRMG RVT +NL + Sbjct: 120 GAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIH 167 >gi|286142600|gb|ADC41330.1| ribosomal protein L3 [Streptomyces griseus] gi|286142604|gb|ADC41332.1| ribosomal protein L3 [Streptomyces griseus] gi|286142610|gb|ADC41335.1| ribosomal protein L3 [Streptomyces griseus] gi|286142666|gb|ADC41363.1| ribosomal protein L3 [Streptomyces griseus] gi|286142670|gb|ADC41365.1| ribosomal protein L3 [Streptomyces griseus] gi|286142708|gb|ADC41384.1| ribosomal protein L3 [Streptomyces albovinaceus] gi|286142720|gb|ADC41390.1| ribosomal protein L3 [Streptomyces griseus] gi|286142726|gb|ADC41393.1| ribosomal protein L3 [Streptomyces griseus] gi|286142730|gb|ADC41395.1| ribosomal protein L3 [Streptomyces griseus] gi|286142742|gb|ADC41401.1| ribosomal protein L3 [Streptomyces griseus] gi|286142744|gb|ADC41402.1| ribosomal protein L3 [Streptomyces griseus] gi|286142748|gb|ADC41404.1| ribosomal protein L3 [Streptomyces griseus] gi|286142760|gb|ADC41410.1| ribosomal protein L3 [Streptomyces griseus] gi|286142784|gb|ADC41422.1| ribosomal protein L3 [Streptomyces griseus] Length = 167 Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 77/168 (45%), Positives = 100/168 (59%), Gaps = 1/168 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVELR-TPDASEYTLGQEVTAAVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 A HG HRS GS G PGRVFK +MAGRMG RVT +NL + Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIH 167 >gi|254449111|ref|ZP_05062563.1| ribosomal protein L3 [gamma proteobacterium HTCC5015] gi|198261303|gb|EDY85596.1| ribosomal protein L3 [gamma proteobacterium HTCC5015] Length = 176 Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 78/175 (44%), Positives = 103/175 (58%), Gaps = 2/175 (1%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVK 59 M G+V RK GMT V+ +G +PVTV+ +V ++ + +GY ++QV GE + Sbjct: 1 MAIGLVGRKAGMTRVFTEDGVSVPVTVIEAAPNRVTQVKSQEAADGYSSLQVTKGERRAS 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV-FSPSYFTVGQLVDVTGMTIGK 118 V+KPM G ++ V L+EFR++ ++ F GQ VDV G +IGK Sbjct: 61 RVTKPMAGHYAKAGVEAGDGLWEFRLEGEEGEGIEVGGELKVDLFEAGQKVDVIGTSIGK 120 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 GF G +KRHNF ATHG SISHR+ GSTG Q PGRVFK K+MAG MG RVT Sbjct: 121 GFQGGIKRHNFRSQDATHGNSISHRAPGSTGQCQTPGRVFKGKRMAGHMGSKRVT 175 >gi|115444097|ref|NP_001045828.1| Os02g0137200 [Oryza sativa Japonica Group] gi|113535359|dbj|BAF07742.1| Os02g0137200 [Oryza sativa Japonica Group] Length = 274 Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 116/211 (54%), Gaps = 5/211 (2%) Query: 3 SGVVARKLGMTCVYNI-EGRRIPVTVLHL--DNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 GV+A K+GM ++ G+ +PVTV+ V +T +GY AVQVG + + Sbjct: 57 VGVMATKVGMMTYFDPATGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVREE 116 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +++P G P + L EFR+Q D P + F G LVD++G +IGKG Sbjct: 117 KLTRPELGHLGKAGAPPLRHLQEFRLQSVDGYDPGQPLDFADMFKEGDLVDISGKSIGKG 176 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KRHNF THG S SHR+ GS G PGRV+K KKM GRMGG + ++ L++ Sbjct: 177 FQGGIKRHNFKRGLMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKI 235 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V +D+ ++++KG VPG N + + + Sbjct: 236 VKIDNDLKVVMIKGAVPGKPGN-LLRIAPAK 265 >gi|227485525|ref|ZP_03915841.1| ribosomal protein L3 [Anaerococcus lactolyticus ATCC 51172] gi|227236524|gb|EEI86539.1| ribosomal protein L3 [Anaerococcus lactolyticus ATCC 51172] Length = 211 Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats. Identities = 78/186 (41%), Positives = 109/186 (58%), Gaps = 1/186 (0%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 + K+GMT V + +G PVTVL D VV +T D +GY A+QVG + K KNV KP Sbjct: 4 IFTTKVGMTQVIDEDGVITPVTVLKADENVVVQVKTTDVDGYNAIQVGTVDKKEKNVKKP 63 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 +RG + S K+ L E + ++ L G + F G+LVDV ++ GKG GA+ Sbjct: 64 IRGHYDKAGASYKRYLKEINLGEEVTELKAGDKITVDVFEEGELVDVVAISKGKGTQGAI 123 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR N+G A+HG S SHR G+ DP RVFK +K +G+MG RVT++N++VV V+ Sbjct: 124 KRWNYGRGPASHG-SKSHRVAGARAAGSDPSRVFKGRKGSGKMGHERVTIQNVKVVKVNA 182 Query: 185 KRGLIL 190 + IL Sbjct: 183 EDSYIL 188 >gi|326511938|dbj|BAJ95950.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326521546|dbj|BAK00349.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 264 Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 115/211 (54%), Gaps = 5/211 (2%) Query: 3 SGVVARKLGMTCVYNI-EGRRIPVTVLHL--DNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 GV+A K+GM ++ G+ +PVTV+ V +T +GY AVQVG + Sbjct: 47 VGVMATKVGMMTYFDPANGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVRED 106 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +++P G + P + L EFR+ D P + F G LVDV+ +IGKG Sbjct: 107 KLTRPELGHLGKASAPPLRHLQEFRLVAVDAFDPGQELEFNELFKEGDLVDVSAKSIGKG 166 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G +KRHNF THG S SHR+ GS G PGRV+K KKM GRMGG + ++ L++ Sbjct: 167 FQGGIKRHNFKRGLMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKI 225 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V +D+ ++++KG +PG + N + + + Sbjct: 226 VRIDNDLKVVMIKGAIPGKQGN-LLRITPAK 255 >gi|331702080|ref|YP_004399039.1| 50S ribosomal protein L3 [Lactobacillus buchneri NRRL B-30929] gi|329129423|gb|AEB73976.1| 50S ribosomal protein L3 [Lactobacillus buchneri NRRL B-30929] Length = 211 Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats. Identities = 71/209 (33%), Positives = 111/209 (53%), Gaps = 5/209 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ +K+GMT V+ G +PVTV+ + ++ +T++ +GY +VQ+G + + Sbjct: 3 RKGILGKKVGMTQVFTENGELVPVTVVEVTPNVIMQIKTVENDGYDSVQLGYADKRTVLT 62 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP +G N +PK+ + E + + V F G +VDVTG T G G+ Sbjct: 63 NKPEQGHAKKANTTPKRFIKEIK-DVELGDYKVSDEVKADIFKPGDIVDVTGTTKGHGYQ 121 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G + + THG S HR GS G RV K+ GRMG VT++NLE+V+ Sbjct: 122 GNIHKDGQSRGPETHG-SRYHRRPGSLGVI--INRVVPGMKLPGRMGNKTVTIQNLEIVN 178 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 D ++L+KG VPGA K S+I +R + Sbjct: 179 ADTDNNVLLIKGNVPGANK-SYITIRSAV 206 >gi|62184737|ref|YP_219522.1| 50S ribosomal protein L3 [Chlamydophila abortus S26/3] gi|81313080|sp|Q5L720|RL3_CHLAB RecName: Full=50S ribosomal protein L3 gi|62147804|emb|CAH63550.1| putative 50s ribosomal protein [Chlamydophila abortus S26/3] Length = 221 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 71/203 (34%), Positives = 108/203 (53%), Gaps = 8/203 (3%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK----- 59 ++ +K GM V++ +G + +V+ + + V + +GY A+Q+GA E V Sbjct: 7 LMGKKEGMIHVFDKDGNLVACSVISMSSNVVTQIKVDSTDGYNAIQMGANEINVPEKTLH 66 Query: 60 -NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIG 117 V+KP G F ++L E R+ ++ + + +GS F F +DV+G++ G Sbjct: 67 KRVNKPSIGHFKKSGSRVFRELKEVRLSEEAVNEVSLGSEFGLEVFESVSSIDVSGVSKG 126 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF G MKR F G +HG S HR GS G R PGR F K MG VTVKNL Sbjct: 127 KGFQGVMKRFGFRGGPQSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGTVNVTVKNL 185 Query: 178 EVVSVDDKRGLILVKGCVPGAKK 200 EV+ +D ++ ++LVKG +PG + Sbjct: 186 EVIKIDLEKKVLLVKGAIPGPRG 208 >gi|226226279|ref|YP_002760385.1| 50S ribosomal protein L3 [Gemmatimonas aurantiaca T-27] gi|226089470|dbj|BAH37915.1| 50S ribosomal protein L3 [Gemmatimonas aurantiaca T-27] Length = 227 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 75/225 (33%), Positives = 107/225 (47%), Gaps = 22/225 (9%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RKLGMT ++N G+++P TV+ V T+D+ G+ +V++G G +V + Sbjct: 2 IGIIGRKLGMTQLFNELGQQVPCTVVEATPNPVTKVSTVDQAGFASVELGFGAQRVARAN 61 Query: 63 K-------------PMRGFFSSVNVS-PKKKLFEFRVQKDDDLLP------VGSVFSPSY 102 K G + P L FR+ P G + Sbjct: 62 KKGERTPKGHRASKAEVGHAKKAGLDAPPAVLKSFRLDDAPGKNPEIPTYTPGDKITVDI 121 Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162 FT G+ V VTG + G+GF G +KRH F G THG + HR GS G DP RV K KK Sbjct: 122 FTPGERVKVTGTSKGRGFQGVVKRHGFHGGPNTHGNTK-HRKPGSIGAGTDPSRVIKGKK 180 Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVR 207 M G+ G + T N+ + VD +R LI ++G V G N + VR Sbjct: 181 MPGQYGNTQHTALNIRIEKVDTERNLIYLRGSVAGP-TNGILFVR 224 >gi|195425857|ref|XP_002061179.1| GK10341 [Drosophila willistoni] gi|194157264|gb|EDW72165.1| GK10341 [Drosophila willistoni] Length = 375 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 72/229 (31%), Positives = 111/229 (48%), Gaps = 15/229 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49 R GV+ARK+G ++ G R+ T+L + + V+ + ++ + Y + Sbjct: 111 RCGVIARKIGQYPLWLKNGERVRTTLLQIVDNHVIKYTPPEEYQPSHRPSVHNLHKYGCL 170 Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109 VGA ++K G F V PKK + F V L P G+ + +F VG+ V Sbjct: 171 LVGAESTNPALLTKEYCGIFRDSGVMPKKNVARFIVSPQAALAP-GTPLNVGHFRVGEFV 229 Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169 DV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ KM G MG Sbjct: 230 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 289 Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217 K L + ++ K ++ V+G VPG+ N I + D+ K Sbjct: 290 RWRISKGLRIWRINTKYNVMWVQGSAVPGS-TNGLIYIYDTILPLRKPK 337 >gi|15829060|ref|NP_326420.1| 50S ribosomal protein L3 [Mycoplasma pulmonis UAB CTIP] gi|42559684|sp|Q98PY0|RL3_MYCPU RecName: Full=50S ribosomal protein L3 gi|14090004|emb|CAC13762.1| 50S RIBOSOMAL PROTEIN L3 [Mycoplasma pulmonis] Length = 266 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 78/212 (36%), Positives = 117/212 (55%), Gaps = 6/212 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT +++ G IPVT++ + V T +KNGY A+Q+ + K Sbjct: 2 KGILGRKVGMTQIFSDNGIVIPVTLIEVKPNIVSNVLTDEKNGYKAIQLSLEDKKKSRQR 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F+ N +PK+ + E R D +GS S FT G+ VDVTG++ GKGF+G Sbjct: 62 KPEIGHFAKANTTPKRFVKEIR---DMQGFELGSNVDVSIFTPGEFVDVTGISKGKGFAG 118 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG--RVFKNKKMAGRMGGNRVTVKNLEVV 180 +KRHN +HG + TG D +V K M G +G +VT++NLEV+ Sbjct: 119 TIKRHNQKIGPKSHGGGGGSKPVRQTGSLGDISGNKVVKGMTMPGHLGHEQVTIQNLEVI 178 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D K ++LVKG VPG KK ++++++ K Sbjct: 179 MTDVKNNILLVKGAVPGPKKG-FVVIKECAKK 209 >gi|156089107|ref|XP_001611960.1| 50S ribosomal protein L3 [Babesia bovis T2Bo] gi|154799214|gb|EDO08392.1| 50S ribosomal protein L3, putative [Babesia bovis] Length = 350 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 82/210 (39%), Positives = 113/210 (53%), Gaps = 4/210 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R GV+A KLG +++ G R VTV H+D C V+ RT+ ++GY AVQ+G G + Sbjct: 91 RCGVLAYKLGCMSLWDDWGERHMVTVCHVDRCVVLEKRTIAEHGYEAVQLGLGYRNINRQ 150 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SK G F V K + EF+ D LLPVG S +FT GQ V V+G + KGF Sbjct: 151 SKQNIGRFIKAGVGSKDHIAEFKCSSD-CLLPVGHYMSVRHFTPGQWVFVSGWSQPKGFQ 209 Query: 122 GAMKRHNFGGLRATHGVS-ISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 GAM+R +FGG A+HG +H + GS + V++ KM G G + V N V Sbjct: 210 GAMRRWHFGGQNASHGTECKAHSAPGSIAQGKSAHIVWRGTKMGGHKGPDPR-VTNCRVF 268 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 ++ R LI +KG VPG S + +RD+ Sbjct: 269 RIEAHRNLIFLKGTVPG-DVMSVLKIRDAL 297 >gi|94502245|ref|ZP_01308731.1| ribosomal protein L3 [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|161833819|ref|YP_001598015.1| 50S ribosomal subunit protein L3 [Candidatus Sulcia muelleri GWSS] gi|189029486|sp|A8Z668|RL3_SULMW RecName: Full=50S ribosomal protein L3 gi|94451216|gb|EAT14155.1| ribosomal protein L3 [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|152206309|gb|ABS30619.1| 50S ribosomal subunit protein L3 [Candidatus Sulcia muelleri GWSS] Length = 206 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 78/206 (37%), Positives = 127/206 (61%), Gaps = 5/206 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ + +GMT +Y+ G +P +++ C V+ +T +K+GY + Q+G E K KN + Sbjct: 2 SGIIGKNIGMTSMYDESGFNVPCSIIEAGPCIVLQIKTKEKDGYDSCQLGFDEKKYKNTN 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ FF +PKKK+FE ++ + + G++ + F +LV++TG + GKGF G Sbjct: 62 KPLLFFFKKFKSTPKKKIFELPIKGN---IKSGNIIKLNCFHENELVNITGFSKGKGFQG 118 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH F G +HG R+ GS G DP RVFK +MAGRMG +VT+KN +++ Sbjct: 119 VVKRHGFSGVGERSHGQHNRSRAPGSIGAGSDPSRVFKGTRMAGRMGNKKVTLKNRKILK 178 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 +D +++KG VPGA KNS+++++ Sbjct: 179 IDLLNNFLIIKGSVPGA-KNSYLIIK 203 >gi|286142656|gb|ADC41358.1| ribosomal protein L3 [Streptomyces glaucescens] Length = 167 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 75/168 (44%), Positives = 98/168 (58%), Gaps = 1/168 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ V RT D +GY +VQ+ G+ + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGDIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVEIRTS-DASEYTLGQEITAEVFEAGVKVDVTGKSKGKGFAGVMKRHNFRGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 A HG HRS GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167 >gi|286142620|gb|ADC41340.1| ribosomal protein L3 [Streptomyces griseoruber] Length = 167 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 76/168 (45%), Positives = 98/168 (58%), Gaps = 1/168 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ V RT D +GY +VQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPNVVTQVRTNDADGYESVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVEIR-TADASEYTLGQEITAEVFEAGIKVDVTGKSKGKGFAGVMKRHNFKGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 A HG HRS GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167 >gi|286142796|gb|ADC41428.1| ribosomal protein L3 [Streptomyces netropsis] Length = 167 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 77/168 (45%), Positives = 100/168 (59%), Gaps = 1/168 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVELR-TADASEYTLGQEITAAVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 A HG HRS GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167 >gi|286142658|gb|ADC41359.1| ribosomal protein L3 [Streptomyces humidus] Length = 167 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 76/168 (45%), Positives = 98/168 (58%), Gaps = 1/168 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ V RT D +GY +VQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPNVVTQVRTNDSDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVEIR-TADAAEYTLGQEITAEVFEAGVKVDVTGKSKGKGFAGVMKRHNFKGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 A HG HRS GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167 >gi|286142686|gb|ADC41373.1| ribosomal protein L3 [Streptomyces olivoviridis] Length = 167 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 77/168 (45%), Positives = 100/168 (59%), Gaps = 1/168 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVELR-TPDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 A HGV HRS GS G PGRVFK +MAGRMG RVT +NL + Sbjct: 120 GAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIH 167 >gi|286142596|gb|ADC41328.1| ribosomal protein L3 [Streptomyces limosus] gi|286142598|gb|ADC41329.1| ribosomal protein L3 [Streptomyces limosus] gi|286142718|gb|ADC41389.1| ribosomal protein L3 [Streptomyces limosus] gi|286142722|gb|ADC41391.1| ribosomal protein L3 [Streptomyces limosus] gi|286142724|gb|ADC41392.1| ribosomal protein L3 [Streptomyces limosus] gi|286142728|gb|ADC41394.1| ribosomal protein L3 [Streptomyces limosus] gi|286142732|gb|ADC41396.1| ribosomal protein L3 [Streptomyces limosus] gi|286142734|gb|ADC41397.1| ribosomal protein L3 [Streptomyces limosus] gi|286142736|gb|ADC41398.1| ribosomal protein L3 [Streptomyces limosus] gi|286142738|gb|ADC41399.1| ribosomal protein L3 [Streptomyces limosus] gi|286142740|gb|ADC41400.1| ribosomal protein L3 [Streptomyces limosus] gi|286142758|gb|ADC41409.1| ribosomal protein L3 [Streptomyces limosus] gi|286142766|gb|ADC41413.1| ribosomal protein L3 [Streptomyces limosus] gi|286142768|gb|ADC41414.1| ribosomal protein L3 [Streptomyces limosus] gi|286142782|gb|ADC41421.1| ribosomal protein L3 [Streptomyces griseus] gi|286142786|gb|ADC41423.1| ribosomal protein L3 [Streptomyces limosus] gi|286142788|gb|ADC41424.1| ribosomal protein L3 [Streptomyces limosus] gi|286142792|gb|ADC41426.1| ribosomal protein L3 [Streptomyces limosus] gi|286142794|gb|ADC41427.1| ribosomal protein L3 [Streptomyces griseus] Length = 167 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 77/168 (45%), Positives = 98/168 (58%), Gaps = 1/168 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ V RT D +GY AVQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGANVVTQVRTNDTDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVEIR-TADASEYTLGQELNADTFEAGLKVDVTGKSKGKGFAGVMKRHNFKGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 A HG HRS GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167 >gi|286142622|gb|ADC41341.1| ribosomal protein L3 [Streptomyces coelicolor] gi|286142624|gb|ADC41342.1| ribosomal protein L3 [Streptomyces coelescens] gi|286142626|gb|ADC41343.1| ribosomal protein L3 [Streptomyces violaceoruber] gi|286142628|gb|ADC41344.1| ribosomal protein L3 [Streptomyces sp. DSM 40419] gi|286142630|gb|ADC41345.1| ribosomal protein L3 [Streptomyces violaceolatus] gi|286142632|gb|ADC41346.1| ribosomal protein L3 [Streptomyces lividans] gi|286142634|gb|ADC41347.1| ribosomal protein L3 [Streptomyces sp. BTG 4-758] gi|286142636|gb|ADC41348.1| ribosomal protein L3 [Streptomyces sp. BTG 4-759] gi|286142638|gb|ADC41349.1| ribosomal protein L3 [Streptomyces sp. BTG 6-715] gi|286142640|gb|ADC41350.1| ribosomal protein L3 [Streptomyces sp. BTG 6-708] gi|286142642|gb|ADC41351.1| ribosomal protein L3 [Streptomyces sp. BTG 717 I] gi|286142644|gb|ADC41352.1| ribosomal protein L3 [Streptomyces coelicolor] gi|286142646|gb|ADC41353.1| ribosomal protein L3 [Streptomyces sp. BTG 723 I] gi|286142648|gb|ADC41354.1| ribosomal protein L3 [Streptomyces sp. BTG 4-723] gi|286142650|gb|ADC41355.1| ribosomal protein L3 [Streptomyces sp. BTG 4-738] gi|286142652|gb|ADC41356.1| ribosomal protein L3 [Streptomyces coelicolor] gi|286142654|gb|ADC41357.1| ribosomal protein L3 [Streptomyces violaceoruber] Length = 167 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 72/168 (42%), Positives = 96/168 (57%), Gaps = 1/168 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ V RT D +GY +VQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R +G + F G VDVT + GKGF+G MKRHNF G Sbjct: 61 DVTPRRHLVEIR-TAAASEYTLGQEITAEAFESGVKVDVTAKSKGKGFAGVMKRHNFKGG 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +A+HG HR GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 KASHGAHRVHRMPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTVH 167 >gi|286142804|gb|ADC41432.1| ribosomal protein L3 [Streptomyces galbus] Length = 167 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 76/168 (45%), Positives = 98/168 (58%), Gaps = 1/168 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ V RT D +GY +VQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVEIR-TADASEYTLGQEITAEVFEAGIKVDVTGKSKGKGFAGVMKRHNFKGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 A HG HRS GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167 >gi|328781504|ref|XP_625054.3| PREDICTED: 39S ribosomal protein L3, mitochondrial [Apis mellifera] Length = 364 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 64/230 (27%), Positives = 113/230 (49%), Gaps = 19/230 (8%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD--------------KNGYM 47 R+G++ +K+G+ ++ GR++ T++ + + +VV + + KNG Sbjct: 101 RTGLIGKKIGVYPMWLKNGRKVLTTLIQIVDNEVVKYIPPEEYKPVKPIRHRIEVKNG-- 158 Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107 + +GA + ++K G F+ V+PKK L F + + L P G+ ++F G+ Sbjct: 159 CLVLGAINVDPQLLTKEYYGIFNKAGVTPKKVLMRFTISPNAVLQP-GTPLYATHFKPGE 217 Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167 +D+ G TI +GF G MKR F G+ A+HGV+ +HR G+ G RV KM G M Sbjct: 218 FIDIRGKTIDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGKLARVMPGTKMPGHM 277 Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNC 216 G +K ++++ ++ K +I V VPG N+ + D+ Sbjct: 278 GNRWRILKGVKILRINTKYNVIWVLAQNVPGEL-NTMCYLYDTILPTKKS 326 >gi|321468355|gb|EFX79340.1| hypothetical protein DAPPUDRAFT_212601 [Daphnia pulex] Length = 374 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 72/230 (31%), Positives = 113/230 (49%), Gaps = 16/230 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMA------------- 48 RSGV+AR +G +++ +G +I TVLH+ + V+ + ++ + Sbjct: 111 RSGVIARNIGRQQMWDKDGNKIVCTVLHVLDNHVIRYIPPEEYVKTSRGAIHFKNKTPLG 170 Query: 49 -VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107 + VGA + ++ F+ V + PKK L F + + L P + + +F VGQ Sbjct: 171 CLVVGAEATNPEKFTRQYCNLFAEVGLMPKKTLSRFIITPNAALPPC-TPITAGHFLVGQ 229 Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167 VDV G T+ GF G +KR F G A+HG + HR G+ G +D RV+ KM G M Sbjct: 230 AVDVYGKTVDHGFQGVVKRWGFKGGPASHGATKFHRRGGTIGTGRDKARVWPGTKMPGHM 289 Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 G R + L ++ ++ K +I VKG VPGA NS + + D+ K Sbjct: 290 GSERRYNRGLMIMRINMKYNVIYVKGTVPGA-TNSIVRIFDTLLPLRKFK 338 >gi|239790528|dbj|BAH71819.1| ACYPI003905 [Acyrthosiphon pisum] Length = 375 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 74/232 (31%), Positives = 110/232 (47%), Gaps = 15/232 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTL-----DKNGYMA-------- 48 R+G++ARKLG ++ G+ + T+L + + V+ + + Y Sbjct: 109 RTGLIARKLGNYPMWLDNGKSVLSTLLQVIDNHVIKYIPPGEFNPPRKPYSCPNHKKPLG 168 Query: 49 -VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107 + VGA A + +K G F + PKK L F V + L P G+ S+F G Sbjct: 169 CLLVGAESADPQYFTKQYCGLFYREGMMPKKYLGRFMVSPEAALQP-GTPLLASHFRPGD 227 Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167 +DV G TI +GF G MKRH F G+ ATHGV+ SHR G+ G + GR+F KM G M Sbjct: 228 FIDVRGKTIDRGFQGVMKRHGFHGMPATHGVTKSHRRGGNVGHGGEKGRIFPGTKMPGHM 287 Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 G K E++ ++ K +I +KG K NS + + D+ K Sbjct: 288 GNRYRLHKGAEILRINHKYNVIWIKGIASPGKTNSIVYLYDTILPLRKHKSP 339 >gi|286142800|gb|ADC41430.1| ribosomal protein L3 [Streptomyces cinnamoneus] Length = 167 Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 77/168 (45%), Positives = 100/168 (59%), Gaps = 1/168 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDIDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVELR-TADASEYTLGQEITAAVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 A HG HRS GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167 >gi|307128705|ref|YP_003880735.1| 50S ribosomal protein L3 [Candidatus Sulcia muelleri CARI] gi|306483167|gb|ADM90037.1| 50S ribosomal protein L3 [Candidatus Sulcia muelleri CARI] Length = 206 Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats. Identities = 81/206 (39%), Positives = 130/206 (63%), Gaps = 5/206 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 SG++ + +GMT +++ G IP T++ C V+ +T +K+GY + Q+G E K+ N + Sbjct: 4 SGIIGKNIGMTSIFDESGCNIPCTIIEAGPCIVLQIKTKEKDGYDSCQLGFDEKKINNTN 63 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ GFF + +PKKK+FEF ++K + G + + F + V++TG++ GKGF G Sbjct: 64 KPLLGFFKKIKSTPKKKIFEFYIKK---KIKSGDLIKLNIFNENEYVNITGISKGKGFQG 120 Query: 123 AMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 +KRH F G +HG R+ GS G DP RVFK KMAGR+G +VT+K ++++ Sbjct: 121 VVKRHGFSGVGEKSHGQHNRSRAPGSIGAGSDPSRVFKGTKMAGRLGNKKVTIKKIKILK 180 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVR 207 +D + L++VKG VPG KNS++++R Sbjct: 181 IDLIKNLLIVKGSVPG-HKNSYLIIR 205 >gi|307297394|ref|ZP_07577200.1| 50S ribosomal protein L3 [Thermotogales bacterium mesG1.Ag.4.2] gi|306916654|gb|EFN47036.1| 50S ribosomal protein L3 [Thermotogales bacterium mesG1.Ag.4.2] Length = 210 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 86/207 (41%), Positives = 120/207 (57%), Gaps = 7/207 (3%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN-- 60 G++ RKLGMT +Y +G+ VTV+ C VV +T D Y A+QVG E + Sbjct: 2 KGILGRKLGMTTIY-KDGKAFGVTVVKAGPCTVVQKKTSDGGEYDAIQVGFEELTPERAK 60 Query: 61 --VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 ++KP+ F + V P + L EF+V +D VG + F+ G+ VDVTG + G+ Sbjct: 61 KVLTKPLVKKFEAAKVKPHRILKEFKVGNINDF-NVGDIIEARVFSEGEKVDVTGFSKGR 119 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GFSGAMKR NF G A+HG S HR GS G +P +++K KKM G+ G + TVKNL Sbjct: 120 GFSGAMKRWNFRGGEASHG-SKFHRELGSVGNHTEPAKIWKGKKMPGQYGNEKKTVKNLT 178 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWIL 205 VV VD + GL+ + G VPGA+ ++ Sbjct: 179 VVKVDAENGLLAIYGAVPGARGGLLVI 205 >gi|195478966|ref|XP_002100716.1| GE17217 [Drosophila yakuba] gi|194188240|gb|EDX01824.1| GE17217 [Drosophila yakuba] Length = 359 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 71/229 (31%), Positives = 111/229 (48%), Gaps = 15/229 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49 R GV+ARK+G ++ G RI T+L + + V+ + ++ + + Sbjct: 96 RCGVIARKIGQYPLWLKNGERIRTTLLQIADNHVIKYIPPEEYLPAQVPTVANLHKRGCI 155 Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109 VG+ ++K G F + V PKK L F V + L P G+ S ++F +G V Sbjct: 156 LVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEAQLEP-GTPLSVNHFRIGDFV 214 Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169 DV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ KM G MG Sbjct: 215 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 274 Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217 +K L V ++ K ++ V+G VPG + + D+ K Sbjct: 275 RWRKIKGLRVWRINSKYNVMWVQGSSVPGP-TGGLVYIYDTILPLRRNK 322 >gi|332028651|gb|EGI68685.1| 39S ribosomal protein L3, mitochondrial [Acromyrmex echinatior] Length = 271 Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats. Identities = 63/224 (28%), Positives = 118/224 (52%), Gaps = 17/224 (7%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-----NGYMAVQ------ 50 R+G++A+K+G+ ++ G+++ T+L + + ++V + +K + A+Q Sbjct: 3 RTGLIAKKIGVYPLWLKNGKKVNSTLLQVVDNEIVKYIPPEKFFPVKSKKPAIQIKNRRG 62 Query: 51 ---VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107 VGA + ++K F+ V+PK+ L F V + L P G+ ++F G+ Sbjct: 63 CLVVGAENIDPQLITKEYYNIFNDTGVTPKRVLRRFIVSPEAALQP-GTPLFATHFKPGE 121 Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167 +VD+ G TI +GF G MKR F G+ A+HGV+ +HR G+ G + RV KM G M Sbjct: 122 IVDIRGKTIDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKSRVMPGTKMPGHM 181 Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSF 210 G ++ + ++ ++ K +I + G +PG + N++ + D+ Sbjct: 182 GNRWRIIRGVRILRINTKYNVIWILGHNIPG-EINTYCYIYDTL 224 >gi|289614454|emb|CBI58738.1| unnamed protein product [Sordaria macrospora] Length = 365 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 96/218 (44%), Positives = 128/218 (58%), Gaps = 17/218 (7%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 +R+GV+A K GMT G RIP TVL LD Q+V ++T KNGY AVQ+G EAK Sbjct: 102 LRTGVLAVKKGMTVFMGKTGARIPCTVLQLDRVQIVANKTRAKNGYWAVQLGYYEAK--- 158 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 + PK+ L EF+V+ D LLPVG P +F VGQ VDV G+T G GF Sbjct: 159 ------------GIPPKQTLAEFKVRNQDGLLPVGVQLFPDWFHVGQRVDVRGITRGMGF 206 Query: 121 SGAMKRHNFGGLRATHGVSISHRSH-GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 +G MK+H F G A+HG S +HR+ G + RV KKM GRMG + TV+NL V Sbjct: 207 AGGMKKHGFSGQEASHGNSKNHRTIGSVGGSQGSGSRVLPGKKMPGRMGAQQHTVQNLPV 266 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 + VD++ G+++VKG V G K + + V+D+ K A + Sbjct: 267 LMVDNELGIVVVKGAVAG-HKGAVVKVQDAVKKAPPPE 303 >gi|87306538|ref|ZP_01088685.1| 50S ribosomal protein L3 [Blastopirellula marina DSM 3645] gi|87290717|gb|EAQ82604.1| 50S ribosomal protein L3 [Blastopirellula marina DSM 3645] Length = 217 Score = 200 bits (510), Expect = 9e-50, Method: Composition-based stats. Identities = 72/217 (33%), Positives = 112/217 (51%), Gaps = 22/217 (10%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFS- 70 MT V++ G IPVTV+ C V+ ++ +++GY AVQ+G + + ++ RG + Sbjct: 1 MTQVFDESGNIIPVTVIEAGPCHVLQLKSQERDGYEAVQLGFDDKPRRLANRSERGQVAP 60 Query: 71 ------------------SVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 + PK+ + E R + +G S + + VD+ Sbjct: 61 LSSKRAKKLAAAGVEASAKPDCEPKRFVRELRGS--TEGFEIGQEVSVGVLSDVKAVDIV 118 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G + G+G++G MKRHNF G RATHGV HR G TGC P R FK M+G+ G +V Sbjct: 119 GTSKGRGYAGVMKRHNFAGQRATHGVKKVHRHTGGTGCSAYPSRTFKGLNMSGQYGNAKV 178 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 T +N++VV VD++ LILV G PG +++V+ + Sbjct: 179 TQRNVKVVKVDEENNLILVYGAAPGPN-GGFVVVKAT 214 >gi|217073404|gb|ACJ85061.1| unknown [Medicago truncatula] Length = 243 Score = 200 bits (510), Expect = 9e-50, Method: Composition-based stats. Identities = 76/189 (40%), Positives = 99/189 (52%), Gaps = 2/189 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 GV+ KLGM + G +PVTV+ + V +T +GY AVQVG + + + Sbjct: 56 VGVMGTKLGMMSFFQPNGEVVPVTVVGFKEGNIVTQIKTDATDGYNAVQVGYRRVRDRKL 115 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G P L EFR+Q D P + F G LVDV+G TIGKGF Sbjct: 116 TKPEMGHLEKAGAIPMHHLQEFRLQSVDGFEPNQRLVFDELFNEGDLVDVSGTTIGKGFQ 175 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNF +HG S SHR GS G PGRV+K KKM GRMGG + L++V Sbjct: 176 GGIKRHNFKRGPMSHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTNRKTRKLKIVK 234 Query: 182 VDDKRGLIL 190 +D +I+ Sbjct: 235 IDKDLNVIM 243 >gi|289740087|gb|ADD18791.1| mitochondrial ribosomal protein L3 [Glossina morsitans morsitans] Length = 367 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 67/229 (29%), Positives = 112/229 (48%), Gaps = 15/229 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49 R+GV+ARK+G ++ G +I T+L + + + ++ N Y + Sbjct: 102 RTGVIARKIGQYPLWLKNGEKIRTTLLQVVENHAIKYTPPEEYKPAHRPKVAELNKYGCL 161 Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109 VGA ++K F + V+PK+ L F + + P G+ + ++F VG V Sbjct: 162 LVGAESCDPSILTKEYCNLFKNSGVTPKRHLVRFLISPSAAITP-GTPLNANHFRVGDYV 220 Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169 DV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ K+ G MG Sbjct: 221 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKLPGHMGN 280 Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217 K L + +++K ++ V+G +PG+ N + + DS K Sbjct: 281 RWRKAKGLRIWRINNKYNVLWVQGSAIPGS-TNGLVYIYDSILPLRRHK 328 >gi|286142692|gb|ADC41376.1| ribosomal protein L3 [Streptomyces acrimycini] Length = 167 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 76/168 (45%), Positives = 98/168 (58%), Gaps = 1/168 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ V RT D +GY +VQ+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVEIR-TADASEYTLGQEVTAEVFEAGVKVDVTGKSKGKGFAGVMKRHNFKGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 A HG HRS GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167 >gi|194894275|ref|XP_001978039.1| GG17909 [Drosophila erecta] gi|190649688|gb|EDV46966.1| GG17909 [Drosophila erecta] Length = 362 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 70/229 (30%), Positives = 110/229 (48%), Gaps = 15/229 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49 R GV+ARK+G ++ G RI T+L + + V+ + ++ + + Sbjct: 99 RCGVIARKIGQYPLWLKNGERIRTTLLQIADNHVIKYIPPEEYLPAQVPKIANLHKRGCI 158 Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109 VG+ ++K G F + V PKK L F V + L G+ S ++F +G V Sbjct: 159 LVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPE-AQLEAGTPLSVNHFRIGDFV 217 Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169 DV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ KM G MG Sbjct: 218 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 277 Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217 +K L V ++ K ++ V+G VPG + + D+ K Sbjct: 278 RWRIIKGLRVWRINSKYNVMWVQGSSVPGP-TGGLVYIYDTILPLRKNK 325 >gi|42409125|dbj|BAD10375.1| putative 50S ribosomal protein L3 [Oryza sativa Japonica Group] gi|42409256|dbj|BAD10519.1| putative 50S ribosomal protein L3 [Oryza sativa Japonica Group] Length = 215 Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 77/208 (37%), Positives = 114/208 (54%), Gaps = 5/208 (2%) Query: 6 VARKLGMTCVYNI-EGRRIPVTVLHL--DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 +A K+GM ++ G+ +PVTV+ V +T +GY AVQVG + + ++ Sbjct: 1 MATKVGMMTYFDPATGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVREEKLT 60 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 +P G P + L EFR+Q D P + F G LVD++G +IGKGF G Sbjct: 61 RPELGHLGKAGAPPLRHLQEFRLQSVDGYDPGQPLDFADMFKEGDLVDISGKSIGKGFQG 120 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 +KRHNF THG S SHR+ GS G PGRV+K KKM GRMGG + ++ L++V + Sbjct: 121 GIKRHNFKRGLMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKI 179 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSF 210 D+ ++++KG VPG N + + + Sbjct: 180 DNDLKVVMIKGAVPGKPGN-LLRIAPAK 206 >gi|195175673|ref|XP_002028553.1| GL21035 [Drosophila persimilis] gi|194104883|gb|EDW26926.1| GL21035 [Drosophila persimilis] Length = 368 Score = 199 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 71/230 (30%), Positives = 111/230 (48%), Gaps = 16/230 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-------------NGYMA 48 R GV+ARK+G ++ G+++ T+L + + V+ + ++ N Y Sbjct: 104 RCGVIARKIGQYPLWLKNGKKVRTTLLQIADNHVIKYMPHEECRPQKNLSRVHNSNQYGC 163 Query: 49 VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQL 108 + VGA ++K G F V PKK + F V D L P G+ + S F VG+ Sbjct: 164 LLVGAESTNPSMLTKEYCGIFRDAGVVPKKNIMRFMVSPDGALAP-GTPLNISRFRVGEY 222 Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168 VDV G T+ GF G +KRH + G+ A+HGV+ +HR G+ G + GRV+ KM G MG Sbjct: 223 VDVRGKTVDHGFQGVVKRHGYKGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKMPGHMG 282 Query: 169 GNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217 +K L + + K ++ V+G VPG + + D+ K Sbjct: 283 NRWRVLKGLRIWRTNAKYNVMWVQGSSVPGP-TGGLVYIYDTILPLRKLK 331 >gi|286142618|gb|ADC41339.1| ribosomal protein L3 [Streptomyces tuirus] Length = 167 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 75/168 (44%), Positives = 98/168 (58%), Gaps = 1/168 (0%) Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72 T V++ R +PVTV+ V RT D +GY ++Q+ GE + V+KP++G F+ Sbjct: 1 TQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESIQIAFGEIDPRKVNKPLKGHFAKA 60 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 +V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL Sbjct: 61 DVTPRRHLVEIR-TADASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 A HG HRS GS G PGRVFK +MAGRMG RVT +NL V Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167 >gi|21553426|gb|AAM62519.1| 50S ribosomal protein L3 [Arabidopsis thaliana] Length = 271 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 83/214 (38%), Positives = 117/214 (54%), Gaps = 3/214 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 GV+ KLGM + +G +PVTV+ + V +TL +GY AVQ+G + K + Sbjct: 56 IGVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYDAVQIGYRRVRDKKL 115 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G P + L EFR+ + P + F G LVDV G TIGKGF Sbjct: 116 TKPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGDLVDVAGTTIGKGFQ 175 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRH+F + THG S SHR+ GS G PGRV+K KKM GRMGG R ++ L++V Sbjct: 176 GGIKRHHFKRGQMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTRTKIRKLKIVK 234 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 VD + ++++KG +PG N + + + VN Sbjct: 235 VDKELNVVMIKGALPGKPGN-LLRITPAKIVGVN 267 >gi|15224205|ref|NP_181831.1| ribosomal protein L3 family protein [Arabidopsis thaliana] gi|42559537|sp|Q9SKX4|RK3A_ARATH RecName: Full=50S ribosomal protein L3-1, chloroplastic; Flags: Precursor gi|4531443|gb|AAD22128.1| 50S ribosomal protein L3 [Arabidopsis thaliana] gi|110740515|dbj|BAE98363.1| 50S ribosomal protein L3 [Arabidopsis thaliana] gi|208879532|gb|ACI31311.1| At2g43030 [Arabidopsis thaliana] gi|330255107|gb|AEC10201.1| 50S ribosomal protein L3-1 [Arabidopsis thaliana] Length = 271 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 83/214 (38%), Positives = 117/214 (54%), Gaps = 3/214 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 GV+ KLGM + +G +PVTV+ + V +TL +GY AVQ+G + K + Sbjct: 56 IGVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYDAVQIGYRRVRDKKL 115 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G P + L EFR+ + P + F G LVDV G TIGKGF Sbjct: 116 TKPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGDLVDVAGTTIGKGFQ 175 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRH+F + THG S SHR+ GS G PGRV+K KKM GRMGG R ++ L++V Sbjct: 176 GGIKRHHFKRGQMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTRTKIRKLKIVK 234 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 VD + ++++KG +PG N + + + VN Sbjct: 235 VDKELNVVMIKGALPGKPGN-LLRITPAKIVGVN 267 >gi|297824271|ref|XP_002880018.1| 50S ribosomal protein L3 [Arabidopsis lyrata subsp. lyrata] gi|297325857|gb|EFH56277.1| 50S ribosomal protein L3 [Arabidopsis lyrata subsp. lyrata] Length = 271 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 83/214 (38%), Positives = 117/214 (54%), Gaps = 3/214 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 GV+ KLGM + +G +PVTV+ + V +TL +GY AVQ+G + K + Sbjct: 56 IGVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYDAVQIGYRRVRDKKL 115 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G P + L EFR+ + P + F G LVDV G TIGKGF Sbjct: 116 TKPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGDLVDVAGTTIGKGFQ 175 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRH+F + THG S SHR+ GS G PGRV+K KKM GRMGG R ++ L++V Sbjct: 176 GGIKRHHFKRGQMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTRTKIRKLKIVK 234 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 VD + ++++KG +PG N + + + VN Sbjct: 235 VDKELNVVMIKGALPGKPGN-LLRITPAKIVGVN 267 >gi|145628334|ref|ZP_01784135.1| 50S ribosomal protein L3 [Haemophilus influenzae 22.1-21] gi|145640870|ref|ZP_01796452.1| 50S ribosomal protein L3 [Haemophilus influenzae R3021] gi|144980109|gb|EDJ89768.1| 50S ribosomal protein L3 [Haemophilus influenzae 22.1-21] gi|145274384|gb|EDK14248.1| 50S ribosomal protein L3 [Haemophilus influenzae 22.4-21] Length = 163 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 70/161 (43%), Positives = 94/161 (58%), Gaps = 2/161 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V RK+GMT ++N +G +PVTV+ ++ +V +TL+ +GY AVQV G K V+ Sbjct: 2 IGLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP G F V + L+EFR + + +G + F + VDVTG + GKGF G Sbjct: 62 KPEAGHFVKAGVEAGRGLWEFRTEG--EEFTLGQEINVDIFADVKKVDVTGTSKGKGFQG 119 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 +KR NF ATHG S+SHR GS G Q PGRVFK KK Sbjct: 120 GVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKW 160 >gi|195566964|ref|XP_002107045.1| GD17236 [Drosophila simulans] gi|194204442|gb|EDX18018.1| GD17236 [Drosophila simulans] Length = 362 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 69/229 (30%), Positives = 110/229 (48%), Gaps = 15/229 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49 R GV+ARK+G ++ G RI T+L + + V+ + ++ + + Sbjct: 99 RCGVIARKIGQYPLWLKNGERIRTTLLQIADNHVIKYIPPEEYLPAQVPKVANLHKRGCI 158 Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109 VG+ ++K G F + V PKK L F V + L P G+ + ++F +G V Sbjct: 159 LVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEAQLAP-GTPLTVNHFRIGDFV 217 Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169 DV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ KM G MG Sbjct: 218 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 277 Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217 +K L V ++ K ++ V+G V G + + D+ K Sbjct: 278 RWRIIKGLRVWRINTKYNVMWVQGSSVAGP-TGGLVYIYDTILPFRKNK 325 >gi|114589227|ref|XP_001147526.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes] Length = 315 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 72/219 (32%), Positives = 102/219 (46%), Gaps = 34/219 (15%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R G++A KLGM ++ +G++ VT+L A + Sbjct: 95 FRVGLIALKLGMMPLWTKDGQKHVVTLLQ-----------------KATSI--------- 128 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 F+ + + PK+ + F + + + P G+ ++F GQ VDVT TIGKGF Sbjct: 129 -----LEFYRELGLPPKQTVKIFNITDNAAIKP-GTPLYAAHFRPGQYVDVTAKTIGKGF 182 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G MKR F G ATHG + +HR G+ D GRV+ KM G+MG T L+V Sbjct: 183 QGVMKRWGFKGQPATHGQTKTHRRPGAV-ATGDIGRVWPGTKMPGKMGNIYRTEYGLKVW 241 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 ++ K +I V G VPG KN + VRDS A GK Sbjct: 242 RINTKHNIIYVNGSVPG-HKNCLVKVRDSKLPAYKDLGK 279 >gi|91082959|ref|XP_973661.1| PREDICTED: similar to Mitochondrial 39S ribosomal protein L3 [Tribolium castaneum] gi|270007629|gb|EFA04077.1| hypothetical protein TcasGA2_TC014311 [Tribolium castaneum] Length = 355 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 75/222 (33%), Positives = 117/222 (52%), Gaps = 15/222 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49 R+GV+ARK+G+ ++ G++I T+L + + QV+ + T + N + Sbjct: 93 RTGVIARKIGIYPMWLKNGKKISTTLLQVLDNQVIKYYTPESYNPPRPRAGRVSNRKGCL 152 Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109 +GA + ++ G F V PKK L F V D LP G+ S +F VG V Sbjct: 153 LLGAEQGDPSEFTREYCGIFKDSGVIPKKTLARFFVSPDAA-LPPGTSISALHFCVGNYV 211 Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169 DV G+TI +GF G MKRH F G+ A+HGV+ +HR G+ G + GRV+ KM G MG Sbjct: 212 DVRGLTIDRGFQGVMKRHGFKGMPASHGVTKTHRRGGNIGGGGEKGRVWPGTKMPGHMGN 271 Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSF 210 ++ L++ ++ K ++ V G +PGA NS + + D+ Sbjct: 272 RYRILRALKIWRINTKYNVLYVSGQNIPGA-TNSIVYIYDTK 312 >gi|195355411|ref|XP_002044185.1| GM22578 [Drosophila sechellia] gi|194129474|gb|EDW51517.1| GM22578 [Drosophila sechellia] Length = 362 Score = 197 bits (502), Expect = 8e-49, Method: Composition-based stats. Identities = 69/229 (30%), Positives = 110/229 (48%), Gaps = 15/229 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49 R GV+ARK+G ++ G RI T+L + + V+ + ++ + + Sbjct: 99 RCGVIARKIGQYPLWLKNGERIRTTLLQIADNHVIKYIPPEEYLPAQVPKVANLHKRGCI 158 Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109 VG+ ++K G F + V PKK L F V + L P G+ + ++F +G V Sbjct: 159 LVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEAQLAP-GTPLNVNHFRIGDFV 217 Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169 DV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ KM G MG Sbjct: 218 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 277 Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217 +K L V ++ K ++ V+G V G + + D+ K Sbjct: 278 RWRIIKGLRVWRINTKYNVMWVQGSSVAGP-TGGLVYIYDTILPFRKNK 325 >gi|167974870|ref|ZP_02557147.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188997728|gb|EDU66825.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 11 str. ATCC 33695] Length = 214 Score = 197 bits (502), Expect = 8e-49, Method: Composition-based stats. Identities = 72/194 (37%), Positives = 105/194 (54%), Gaps = 8/194 (4%) Query: 21 RRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKL 80 + + TV++++ +V+ +T +K+GY A+Q+G K K ++KP+ G F N PK+ + Sbjct: 1 KAVAATVIYVEPNKVLAVKTNEKDGYNAIQIGYETVKEKALNKPLLGQFKKANSDPKRHI 60 Query: 81 FEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSI 140 EFR D + VG+ + S F GQLV+ T G GF+G++KRHNF HG Sbjct: 61 KEFR----DVVAEVGAELTVSEFEPGQLVNAQAYTKGHGFTGSIKRHNFSMGPMGHGAGY 116 Query: 141 SHRSHGSTG---CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197 HR GS RVFK K+ G G VT KNL V+ V LIL+KG +PG Sbjct: 117 PHRYVGSIAKGRGGSQAQRVFKGTKLPGHYGHELVTTKNLLVLDVKANENLILIKGAIPG 176 Query: 198 AKKNSWILVRDSFK 211 K S +L++ + K Sbjct: 177 P-KGSIVLLKSAKK 189 >gi|88607449|ref|YP_504892.1| 50S ribosomal protein L3 [Anaplasma phagocytophilum HZ] gi|88598512|gb|ABD43982.1| ribosomal protein L3 [Anaplasma phagocytophilum HZ] Length = 220 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 104/210 (49%), Positives = 140/210 (66%), Gaps = 6/210 (2%) Query: 8 RKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMR 66 +K+G T +++ G R+PVT+L L++ VV + +GY AV +G + V+KP Sbjct: 4 KKVGSTAMFDATTGSRVPVTLLLLEDTFVVGTKVSGIHGYDAVVLGT--KRRGVVNKPQV 61 Query: 67 GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKR 126 + + KLFE RV+ DL P GS S+F GQ VDVTG TIG+GF+G MKR Sbjct: 62 QALRKLGIEEDYKLFESRVKAVGDLQP-GSKVEVSHFFKGQFVDVTGYTIGRGFAGVMKR 120 Query: 127 HNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKR 186 HNF GLRA+HGVSISHRS GSTG QDPGRVFK KKMAG MG ++VT++NL+V+ VD+K Sbjct: 121 HNFRGLRASHGVSISHRSQGSTGQCQDPGRVFKGKKMAGHMGDSKVTMQNLQVMLVDEKE 180 Query: 187 GLILVKG-CVPGAKKNSWILVRDSFKSAVN 215 L++V+G +PGA+ S++ VRD+ K V Sbjct: 181 SLLVVRGTGIPGAE-GSYVFVRDAIKKPVP 209 >gi|24642280|ref|NP_511166.2| mitochondrial ribosomal protein L3 [Drosophila melanogaster] gi|22832292|gb|AAF48508.2| mitochondrial ribosomal protein L3 [Drosophila melanogaster] Length = 362 Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 70/229 (30%), Positives = 110/229 (48%), Gaps = 15/229 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49 R GV+ARK+G ++ G RI T+L + + V+ + ++ + + Sbjct: 99 RCGVIARKIGQYPLWLKNGERIRTTLLQIVDNHVIKYIPPEEYLPAQVPTVANLHKRGCI 158 Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109 VG+ ++K G F + V PKK L F V + L P G+ + ++F VG V Sbjct: 159 LVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEAQLAP-GTPLNVNHFRVGDFV 217 Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169 DV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ KM G MG Sbjct: 218 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 277 Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217 +K L V ++ K ++ V+G V G + + D+ K Sbjct: 278 RWRIIKGLRVWRINTKYNVMWVQGSSVAGP-TGGLVYIYDTILPTRKNK 325 >gi|21430844|gb|AAM51100.1| SD19562p [Drosophila melanogaster] Length = 362 Score = 196 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 70/229 (30%), Positives = 110/229 (48%), Gaps = 15/229 (6%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49 R GV+ARK+G ++ G RI T+L + + V+ + ++ + + Sbjct: 99 RCGVIARKIGQYPLWLKNGERIRTTLLQIVDNHVIKYIPPEEYLPAQVPTVANLHKRGCI 158 Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109 VG+ ++K G F + V PKK L F V + L P G+ + ++F VG V Sbjct: 159 LVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSPEAQLAP-GTPLNVNHFRVGDFV 217 Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169 DV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ KM G MG Sbjct: 218 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 277 Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217 +K L V ++ K ++ V+G V G + + D+ K Sbjct: 278 RWRIIKGLRVWRINTKYNVMWVQGSSVAGP-TGGLVYIYDTILPTRKNK 325 >gi|308487608|ref|XP_003105999.1| hypothetical protein CRE_20298 [Caenorhabditis remanei] gi|308254573|gb|EFO98525.1| hypothetical protein CRE_20298 [Caenorhabditis remanei] Length = 403 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 77/221 (34%), Positives = 100/221 (45%), Gaps = 21/221 (9%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMA------------- 48 R G+V RK+GM + +G RI TVL +D VV + D Y A Sbjct: 102 RVGLVVRKIGMLPQWTNDGNRILCTVLEVDENHVVSVTSPDS-WYKASAVGKRKAFNRHG 160 Query: 49 ----VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V VGAG + R F+ V K+KL F V +D L G +F Sbjct: 161 PMWRVTVGAGNDDPTKYTLAYRRQFARAGVPTKEKLGCFLVTED-ALPHAGQPLDARHFA 219 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 VGQ V TG TI GF G M R G T + SHR GS G D R++ K+M Sbjct: 220 VGQHVTATGKTIDWGFQGGMHRWGMRGQP-TRRTTKSHRRIGSVGSVGD-ARIWPGKRMP 277 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWIL 205 G MG TV LE+V +++ + +I VKG VPG + +L Sbjct: 278 GHMGYEWRTVSGLEIVRINNDKQVIYVKGSVPGDIGETLLL 318 >gi|168704969|ref|ZP_02737246.1| 50S ribosomal protein L3 [Gemmata obscuriglobus UQM 2246] Length = 302 Score = 194 bits (495), Expect = 5e-48, Method: Composition-based stats. Identities = 86/292 (29%), Positives = 127/292 (43%), Gaps = 73/292 (25%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTL------DKNGYMAVQVGAG 54 M G++ K+GMT V+ EG+ PVTVL L C V+ + K+GY A+Q+G Sbjct: 1 MALGLIGYKVGMTQVFTPEGKAEPVTVLQLGPCPVLQIKYPSAEGGAAKDGYTAIQLGFK 60 Query: 55 EAKVKNVSKPMRGFFS--------------------SVNVSPKKKLFEFRVQ-------- 86 + K K+ ++P +G + + P+K + EFR+ Sbjct: 61 DKKRKSATRPEQGHVAAGLKSKRKDARQKAGVVLPPKADCEPQKVIREFRIDLGGAFVQT 120 Query: 87 -------------------------------KDDDLLPVGSVFSPS-YFTVGQLVDVTGM 114 +D L VG + F Q VDV G Sbjct: 121 GTIKAGPAEASFKVERIKVSGEGATQKHELYTEDVTLKVGDKLTVDQVFKDVQAVDVIGT 180 Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC---RQDPGRVFKNKKMAGRMGGNR 171 T G+G++G MKRHNF G+ A HG HR GST + GR K + AG+ G R Sbjct: 181 TKGRGYTGVMKRHNFDGMPAAHGAKKVHRQAGSTASLASNRGTGRPKKGLRRAGQYGNER 240 Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK---SAVNCKGKV 220 VT++NL VV VD + L+L++G +PG + ++VR + K + K K Sbjct: 241 VTIRNLTVVKVDVENNLMLIRGGIPGFN-GAVVMVRPTNKVGPGSPKAKTKA 291 >gi|42559164|sp|O80360|RK3_TOBAC RecName: Full=50S ribosomal protein L3, chloroplastic; Flags: Precursor gi|189096128|pdb|3BBO|F Chain F, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome gi|3298437|dbj|BAA31509.1| chloroplast ribosomal protein L3 [Nicotiana tabacum] Length = 259 Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 83/209 (39%), Positives = 116/209 (55%), Gaps = 3/209 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 GV+A KLGM + G +PVTV+ + V +T +GY AVQVG + + + Sbjct: 44 VGVMATKLGMMSFFEESGTVVPVTVVGFREGNIVTQIKTEATDGYNAVQVGYRRVRDRKL 103 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G + P + L EFR+Q D + F G LVDV+G TIGKGF Sbjct: 104 TKPEMGHLEKSGIIPLRHLQEFRLQSIDGFEVTQKLDFGELFKEGDLVDVSGTTIGKGFQ 163 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNF + THG S SHR GS G PGRV+K KKM GRMGG + ++ L++V Sbjct: 164 GGIKRHNFKRGQMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVK 222 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 +DD+ +I++KG +PG N + + + Sbjct: 223 IDDQLNIIMIKGALPGKPGN-LLRIAPAK 250 >gi|329942411|ref|ZP_08291221.1| ribosomal L3 family protein [Chlamydophila psittaci Cal10] gi|328815321|gb|EGF85309.1| ribosomal L3 family protein [Chlamydophila psittaci Cal10] Length = 208 Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 102/196 (52%), Gaps = 8/196 (4%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK------NVSKPM 65 M V++ +G + +V+ + + V + +GY A+Q+GA E V V+KP Sbjct: 1 MIHVFDKDGNLVACSVISMSSNVVTQIKVDSTDGYNAIQMGANEINVPEKTLQKRVNKPS 60 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G F + L E R+ ++ + + +GS F F VD++G++ GKGF G M Sbjct: 61 LGHFKKSGSRVFRSLKEVRLSEEAVNEVSLGSEFGLEVFESVSSVDISGVSKGKGFQGVM 120 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR F G +HG S HR GS G R PGR F K MG VTVKNLEV+ VD Sbjct: 121 KRFGFRGGPQSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGTVNVTVKNLEVIKVDL 179 Query: 185 KRGLILVKGCVPGAKK 200 ++ ++LVKG +PG + Sbjct: 180 EKKVLLVKGAIPGPRG 195 >gi|307103242|gb|EFN51504.1| hypothetical protein CHLNCDRAFT_48352 [Chlorella variabilis] Length = 215 Score = 194 bits (494), Expect = 8e-48, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 104/214 (48%), Gaps = 5/214 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 GV K GM + +G +P TV+ L V +T +K+GY AVQVG + + Sbjct: 5 VGVWGTKAGMMQFF-KDGASLPATVIALEGGNIVTHVKTAEKDGYTAVQVGYKTCREDKI 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G K L EF+V+ + F G +VDV G TIGKGF Sbjct: 64 TKPELGHLQKAGAPAMKHLREFKVKDASGYEAGQQLNLVDMFKAGDMVDVAGTTIGKGFQ 123 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F THG S S R HGSTG PGRVF K AG+MG R +K EV+ Sbjct: 124 GGIKRWGFARGNMTHG-SKSKREHGSTGPGSSPGRVFPGLKAAGQMGNVRRKLKA-EVLL 181 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 VD + I+VKG VPG N + + + VN Sbjct: 182 VDAENSAIVVKGSVPGKPGN-VVEIAPAKVVGVN 214 >gi|325973271|ref|YP_004250335.1| 50S ribosomal protein L3 [Mycoplasma suis str. Illinois] gi|325989706|ref|YP_004249405.1| 50S ribosomal protein L3 [Mycoplasma suis KI3806] gi|323574791|emb|CBZ40451.1| 50S ribosomal protein L3 [Mycoplasma suis] gi|323651873|gb|ADX97955.1| 50S ribosomal protein L3 [Mycoplasma suis str. Illinois] Length = 230 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 80/219 (36%), Positives = 124/219 (56%), Gaps = 7/219 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVK 59 M V+ +K+GM+ +++ G IPVT+L L QV+ +T++K GY A+ VG GE + + Sbjct: 1 MSREVICQKIGMSSIFSEGGELIPVTLLKLIPLQVLSCKTVEKEGYNALVVGVGEECEER 60 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGK 118 +SKP+RG F V+ ++K+ E + VG+ S F +G+ + + G++ G Sbjct: 61 KLSKPVRGQFQKKGVALRRKITELSWDGIKE-YSVGNFVSFSDLFQIGEKIKIQGVSRGM 119 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD---PGRVFKNKKMAGRMGGNRVTVK 175 GF+GA+KR NF THG HR GS + P +V+K KKM+GRMGG T+ Sbjct: 120 GFTGAIKRWNFATGPKTHGAGYPHRFQGSLETGRGGMSPQKVWKGKKMSGRMGGENCTIL 179 Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 NL +V +D + ++ VKG +PG KK + VR K+ Sbjct: 180 NLRIVHIDSENNIVAVKGSIPGRKKR-LVRVRSLHKAKA 217 >gi|163804107|ref|ZP_02197891.1| 50S ribosomal protein L3 [Vibrio sp. AND4] gi|159172077|gb|EDP57032.1| 50S ribosomal protein L3 [Vibrio sp. AND4] Length = 148 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 70/150 (46%), Positives = 96/150 (64%), Gaps = 2/150 (1%) Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K G F+ V + L+EFR++ D++ VG+ + F + VDVTG + GKGF G Sbjct: 1 KAEAGHFAKAGVEAGRGLWEFRLENDEEF-AVGAELTVELFNETKKVDVTGTSKGKGFQG 59 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 A+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V V Sbjct: 60 AVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRV 119 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D +R L+L+KG VPG+ + ++V+ + K+ Sbjct: 120 DAERNLLLIKGAVPGSTGGN-VIVKPAVKA 148 >gi|242019299|ref|XP_002430099.1| 50S ribosomal protein L3, putative [Pediculus humanus corporis] gi|212515180|gb|EEB17361.1| 50S ribosomal protein L3, putative [Pediculus humanus corporis] Length = 327 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 18/225 (8%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD--------------KNGYM 47 RSG++ K+G+ ++ G+ + T++ + + V+ + K G + Sbjct: 51 RSGLIGIKIGVLPQWHTNGKPLLTTLIQIVDNHVISYIPPKDFIVNKKRLGRRFYKEGKL 110 Query: 48 -AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVG 106 + VG+ + ++ G F+ V PKK L F + + P G+ ++F VG Sbjct: 111 GCLVVGSVNCDPQMFTREYNGLFAKAGVMPKKLLTRFPIHPCAAIQP-GTPLYAAHFKVG 169 Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166 VD+TG TI +GF G MKR + G+ A+HGV+ +HR G+ G + RVF KM G Sbjct: 170 DYVDITGKTIYRGFQGVMKRWGYKGMPASHGVTKTHRRPGNIGSGGEKARVFPGTKMPGV 229 Query: 167 MGGNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSF 210 G T + L + +D K ++ V G +PG NS++ V D+ Sbjct: 230 QGNKMRTTRGLTIWKIDHKYNVLYVSGDNIPG-DVNSFVYVHDTV 273 >gi|241735550|ref|XP_002413953.1| 60S ribosomal protein L3, putative [Ixodes scapularis] gi|215507807|gb|EEC17261.1| 60S ribosomal protein L3, putative [Ixodes scapularis] Length = 390 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 70/220 (31%), Positives = 109/220 (49%), Gaps = 15/220 (6%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN----------GYMAVQ 50 +R+GV+ARK+G+ ++ G+RI T+L + + V+ + ++ G + Sbjct: 107 VRTGVIARKIGIYPMWTTSGKRILTTLLQVLDNHVIRYIPSEEYASSRFGFKAKGRGCLV 166 Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 VGAG A P F V PK+KL F + D + P G+ S +F G V+ Sbjct: 167 VGAGSADPMLFKAPYLRLFQESGVMPKRKLTRFLITDDAAIQP-GTPLSAGHFRAGDYVN 225 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 V G T G GF G MKR G +HG + +HR G+ G G + K K+M G MG Sbjct: 226 VYGKTRGHGFQGVMKRWKMKGGPKSHGTTKAHRRLGAIG--GPRGIILKGKRMPGHMGQE 283 Query: 171 RVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDS 209 R + L++ ++ K ++ V+G VPGA S++ + DS Sbjct: 284 RRLLVGLKIWRINTKLNVLFVQGPAVPGATL-SYVNIYDS 322 >gi|168038916|ref|XP_001771945.1| predicted protein [Physcomitrella patens subsp. patens] gi|162676727|gb|EDQ63206.1| predicted protein [Physcomitrella patens subsp. patens] Length = 214 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 105/197 (53%), Gaps = 3/197 (1%) Query: 15 VYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVN 73 V+ +G+ +P TV+ + V ++ +GY AVQVG + + ++KP G + V Sbjct: 11 VFTEDGKAVPCTVVGFHEGNIVTQVKSDATDGYTAVQVGYRRVRDRKLTKPQLGHLNKVG 70 Query: 74 VSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLR 133 P + L EFRV + P + F G L+DV G +IGKGF G +KR+NF + Sbjct: 71 AIPMRHLQEFRVVSAEGYEPNQVLQLEEIFKEGDLIDVVGNSIGKGFQGGIKRYNFARGQ 130 Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKG 193 THG S S R GS G PGRV+ KKM G+MG R ++ LE+V VD + +L+KG Sbjct: 131 MTHG-SKSKRQLGSIGAGTTPGRVYPGKKMPGQMGSGRAKIRKLEIVKVDPELRALLIKG 189 Query: 194 CVPGAKKNSWILVRDSF 210 VPG N + + + Sbjct: 190 SVPGKPGN-LLRITPAK 205 >gi|13507904|ref|NP_109853.1| 50S ribosomal protein L3 [Mycoplasma pneumoniae M129] gi|2500227|sp|P75580|RL3_MYCPN RecName: Full=50S ribosomal protein L3 gi|1674371|gb|AAB96314.1| ribosomal protein L3 [Mycoplasma pneumoniae M129] Length = 287 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 75/219 (34%), Positives = 114/219 (52%), Gaps = 8/219 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+ K+GM+ V+ R+P+TV++ + QV +T K+ Y A + + K ++K Sbjct: 5 GIFGVKVGMSQVFTTNNERLPITVIYCEPNQVAGVKTEAKDKYSATLLSFDTVENKKLNK 64 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSG 122 P +GFF N+ P K L E R + +G +P + F VG+ VDV+ ++ G+GF+G Sbjct: 65 PQQGFFEKNNLKPTKHLQEIR---NMTGFEMGQQITPQNLFQVGEYVDVSAISKGRGFTG 121 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCR---QDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 A+KR NF HG HR GS RVFK KKM+G G +VTV+NL + Sbjct: 122 AIKRWNFKIGPLGHGAGYPHRFQGSVQAGRGGASAQRVFKGKKMSGHYGHEKVTVQNLRI 181 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 V D+ L+LV G + G + +L+R + K K Sbjct: 182 VGFDEANMLVLVSGAIAGPE-GGVVLIRTAKKKPGVVKP 219 >gi|221061915|ref|XP_002262527.1| 50S ribosomal protein L3 [Plasmodium knowlesi strain H] gi|193811677|emb|CAQ42405.1| 50S ribosomal protein L3, putative [Plasmodium knowlesi strain H] Length = 336 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 73/216 (33%), Positives = 115/216 (53%), Gaps = 4/216 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K+G ++++ G + VTV ++NC V+ + + KNGY A++VG G V Sbjct: 75 RTGLLAYKVGCMSIWDVWGVKHAVTVAKVNNCYVLNQKNITKNGYEALEVGIGNMNVIKQ 134 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SK G + + K+ EF+ D LPV FS +F+ GQ + ++ KGF Sbjct: 135 SKNNIGNYIKRKLGFIHKIKEFKCT-HDCFLPVQHKFSVRHFSPGQNLFISSTVKNKGFC 193 Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179 GAMK+ NF G A+HG S +HRS GS + VF++KKM +G V N ++ Sbjct: 194 GAMKKWNFSGKNASHGTESKAHRSLGSVSMGKTVNIVFRHKKMNTHIGEKNLVKCSNNKL 253 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++ + L+ +KG + G KN I + D+ A N Sbjct: 254 FRINSLQNLLFIKGSI-GGYKNKIIKISDAKGRAFN 288 >gi|68066851|ref|XP_675399.1| 50S ribosomal protein L3 [Plasmodium berghei strain ANKA] gi|56494563|emb|CAH99831.1| 50S ribosomal protein L3, putative [Plasmodium berghei] Length = 335 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 74/216 (34%), Positives = 114/216 (52%), Gaps = 4/216 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++ K+G +++I G + VTV+ +DNC V+ + + KNGY A++VG G V Sbjct: 74 RTGLLGYKVGCMSIWDIWGVKHAVTVVKIDNCYVLNQKNITKNGYEALEVGIGNMNVIKQ 133 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SK G + + K+ EF+ D LPV FS +F+ GQ + ++ KGF Sbjct: 134 SKNNIGNYIKRRLGFIHKIREFKCTSD-CFLPVQHKFSARHFSPGQNLFISSSIKNKGFC 192 Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179 GAMK+ NF G +HG S +HRS GS + VF+NKKM +G V N ++ Sbjct: 193 GAMKKWNFSGKNKSHGTESKAHRSLGSVSMGKTINIVFRNKKMNTHIGEKSLVKCSNNKL 252 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++ + L+ +KG + G KN I + D+ A N Sbjct: 253 FRINSLKNLLFIKGSI-GGYKNKVIKISDAKGRAFN 287 >gi|82593828|ref|XP_725167.1| ribosomal protein L3 [Plasmodium yoelii yoelii str. 17XNL] gi|23480072|gb|EAA16732.1| ribosomal protein L3, putative [Plasmodium yoelii yoelii] Length = 335 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 74/216 (34%), Positives = 114/216 (52%), Gaps = 4/216 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++ K+G +++I G + VTV+ +DNC V+ + + KNGY A++VG G V Sbjct: 74 RTGLLGYKVGCMSLWDIWGVKHAVTVVKIDNCYVLNQKNITKNGYEALEVGIGNMNVIKQ 133 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SK G + + K+ EF+ D LPV FS +F+ GQ + ++ KGF Sbjct: 134 SKNNIGNYIKRRLGFIHKIREFKCTSD-CFLPVQHKFSARHFSPGQNLFISSSIKNKGFC 192 Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179 GAMK+ NF G +HG S +HRS GS + VF+NKKM +G V N ++ Sbjct: 193 GAMKKWNFSGKNKSHGTESKAHRSLGSVSMGKTINIVFRNKKMNTHIGEKSLVKCSNNKL 252 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++ + L+ +KG + G KN I + D+ A N Sbjct: 253 FRINSLKNLLFIKGSI-GGYKNKVIKISDAKGRAFN 287 >gi|316967931|gb|EFV52284.1| electron transfer flavoprotein, alpha subunit [Trichinella spiralis] Length = 822 Score = 191 bits (485), Expect = 7e-47, Method: Composition-based stats. Identities = 72/227 (31%), Positives = 108/227 (47%), Gaps = 21/227 (9%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLD----NCQVVVHRTLDK-NGYMAV------ 49 +R+G+V RK+G+ Y G R+ T+L + V+ + +K Y + Sbjct: 174 VRTGLVCRKIGVIPQYFKNGTRVLCTLLEAKEKVLDNHVISYTDPEKWYKYSKIGKKEGL 233 Query: 50 ------QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103 VG + + RG F V PK+KL F + + + P G+ ++F Sbjct: 234 KMLGRLTVGVQSDDPQKFTAAYRGIFEKAGVLPKQKLAAFAITPNAQIQP-GTRLYANHF 292 Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 TVGQ VDV G TI GF G M R F G+ ATHGV+ +HR GS G V KKM Sbjct: 293 TVGQYVDVWGHTIDYGFQGVMVRWGFKGMPATHGVTKTHRRPGSIGTAG-QACVKPGKKM 351 Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDS 209 G MG ++ ++++ ++ ++ VKG VPG + I V+DS Sbjct: 352 PGHMGSEWRALRGIQILRINTAEQVLYVKGPNVPGPV-GTLIYVKDS 397 >gi|255565958|ref|XP_002523967.1| 50S ribosomal protein L3, putative [Ricinus communis] gi|223536694|gb|EEF38335.1| 50S ribosomal protein L3, putative [Ricinus communis] Length = 285 Score = 191 bits (485), Expect = 7e-47, Method: Composition-based stats. Identities = 80/209 (38%), Positives = 116/209 (55%), Gaps = 3/209 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 GV+ KLGM + +G +PVTV+ + V +T +GY +VQVG + + + Sbjct: 70 IGVMGTKLGMMSYFESDGTVVPVTVVGFREGNIVTQIKTEATDGYDSVQVGYRRIRDRKL 129 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G V P + L EFR+Q D + F G LVDV+G+TIGKGF Sbjct: 130 TKPELGHLEKAGVIPMRHLQEFRLQNIDGFEVGQKLVLEEIFKEGDLVDVSGITIGKGFQ 189 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KRHNF + THG S SHR+ GS G PGRV+K KKM GRMGG + ++ L++V Sbjct: 190 GGIKRHNFKRGQMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVK 248 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210 +D+ +++KG +PG N + + + Sbjct: 249 IDNDLRAVMIKGALPGKPGN-LLRIAPAK 276 >gi|314984887|gb|EFT28979.1| 50S ribosomal protein L3 [Propionibacterium acnes HL005PA1] Length = 173 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 83/170 (48%), Positives = 105/170 (61%), Gaps = 2/170 (1%) Query: 46 YMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105 Y AVQ+G G + NV+KP G F V+P++ L E R D +G + F+ Sbjct: 1 YSAVQLGYGAVQAHNVTKPEAGPFEKAGVTPRRHLVELR-TADASEYTLGQEIAADVFSE 59 Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165 VDVTG + GKG +G MKRH FGGLRATHGV HRS GS G PG+V K +MAG Sbjct: 60 SDFVDVTGTSKGKGTAGVMKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAG 119 Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 RMG RVTV+NL+V SVD +RG++LV+G VPG K S ++VR + K A Sbjct: 120 RMGVERVTVQNLQVHSVDAERGIMLVRGAVPGP-KGSLLVVRSAAKKAAK 168 >gi|332178455|gb|AEE14144.1| 50S ribosomal protein L3 [Thermodesulfobium narugense DSM 14796] Length = 208 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 115/207 (55%), Gaps = 7/207 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G+V +K+GMT G IPVTV+ V RT++K+GY A++V E + Sbjct: 4 MFMGLVGKKIGMTSYITPSG-VIPVTVVQAIKGTVADKRTIEKDGYEAIRVAFQECSERK 62 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 ++KP G F ++ P KK+ EF+ L VG S F+VG ++VTG+T G G Sbjct: 63 INKPELGLFKKASIKPHKKIVEFQNSN----LNVGDTLDISMFSVGDSINVTGITRGFGT 118 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G +KR F +HG S + R GSTG ++ K KKM G MG + TVKN+ VV Sbjct: 119 AGTIKRWKFQRGPMSHG-SKNIRKIGSTGVGTGMSKIIKGKKMPGHMGNVKRTVKNISVV 177 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207 + + L+++KG +PG KNS++++ Sbjct: 178 DLMPEDYLVILKGSIPG-HKNSFVILY 203 >gi|301633145|gb|ADK86699.1| 50S ribosomal protein L3 [Mycoplasma pneumoniae FH] Length = 287 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 73/219 (33%), Positives = 112/219 (51%), Gaps = 8/219 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+ K+GM+ V+ R+P+TV++ + QV + K+ Y A + + K ++K Sbjct: 5 GIFGVKVGMSQVFTTNNERLPITVIYCEPNQVAGVKNEAKDKYSATLLSFDTVENKKLNK 64 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSG 122 P +GFF N+ P K L E R + +G +P + F VG+ VDV+ ++ G+GF+G Sbjct: 65 PQQGFFEKNNLKPTKHLQEIR---NMTGFEMGQQITPQNLFQVGEYVDVSAISKGRGFTG 121 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCR---QDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 A+KR NF HG HR GS RVFK KKM+G G +VTV+NL + Sbjct: 122 AIKRWNFKIGPLGHGAGYPHRFQGSVQAGRGGASAQRVFKGKKMSGHYGHEKVTVQNLRI 181 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 V D+ L+LV G + G + + +R + K K Sbjct: 182 VGFDEANMLVLVSGAIAGPE-GGVVFIRTAKKKPGVVKP 219 >gi|291230696|ref|XP_002735302.1| PREDICTED: mitochondrial ribosomal protein L3-like [Saccoglossus kowalevskii] Length = 349 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 102/210 (48%), Gaps = 9/210 (4%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK--NGYMAVQVGAGEAKVK 59 R GV+A KLGM ++ +G R+ T+L L +C V+ + ++ Y + VGA A Sbjct: 101 RCGVIAVKLGMMPLWTKQGERLQCTLLQLQDCCVIDYIPPEETQEKYGYLYVGAKNASPL 160 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 V K F + ++F G VDVT +IG G Sbjct: 161 YVGKAYADLFKXXXXXXXXXXXXXXXXXKR------TPLYAAHFRPGMYVDVTARSIGHG 214 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G MKR G A+HG + +HR G+TG PGRV KKMAG+MG T NL+V Sbjct: 215 FQGVMKRWGMKGQPASHGATKTHRKMGATGGGGKPGRVRLGKKMAGQMGNQLRTEVNLQV 274 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 V V+ + +I V G VPG S+++V+D+ Sbjct: 275 VRVNTRYNIIYVSGTVPGFHT-SFVVVKDA 303 >gi|218463388|ref|ZP_03503479.1| 50S ribosomal protein L3 [Rhizobium etli Kim 5] Length = 159 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 109/160 (68%), Positives = 128/160 (80%), Gaps = 1/160 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 MRSGV+A+K+GMT VYN G +PVTVL +D CQVV RT++KNGY AVQ+GAG+AKVKN Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMDGCQVVATRTVEKNGYTAVQLGAGQAKVKN 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 SK MRG F+ NV PK KL EFRV +D +LL +G+ +F GQLVDVTG TIGKGF Sbjct: 61 TSKAMRGNFAVANVEPKAKLAEFRVSED-NLLEIGTEIKAGHFAAGQLVDVTGTTIGKGF 119 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 +GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VF+ Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFQE 159 >gi|262158450|ref|ZP_06029565.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae INDRE 91/1] gi|262029611|gb|EEY48260.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae INDRE 91/1] Length = 151 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 70/147 (47%), Positives = 94/147 (63%), Gaps = 2/147 (1%) Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF GA+K Sbjct: 7 AGHFAKAGVEAGRGLWEFRLENGEEF-AVGSELTVELFNEVKKVDVTGTSKGKGFQGAVK 65 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD + Sbjct: 66 RWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVDAE 125 Query: 186 RGLILVKGCVPGAKKNSWILVRDSFKS 212 R L+L+KG VPGA + ++V+ + K+ Sbjct: 126 RNLLLIKGAVPGATGGN-VIVKPAVKA 151 >gi|294950331|ref|XP_002786576.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239900868|gb|EER18372.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 334 Score = 187 bits (476), Expect = 8e-46, Method: Composition-based stats. Identities = 69/203 (33%), Positives = 99/203 (48%), Gaps = 3/203 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G+ A K+G +++ G++ VTV + N V+ +T+ +NGY A+QVG G + Sbjct: 77 RPGICAFKIGCMGLWDEWGQKHAVTVCKVHNSHVMRQKTIARNGYEALQVGTGWRTLGLH 136 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 + G V PK + EFRV D +LPVG FS +F GQ V V+G + GKG+ Sbjct: 137 ERRRIGCCIRAGVEPKHHIEEFRVSSD-CMLPVGHEFSVRHFVPGQRVFVSGWSRGKGWQ 195 Query: 122 GAMKRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 G + R F G + R GS +V K KK G MG + V N V Sbjct: 196 GVVTRWRFAGEGPIRCAATGGMRMPGSISRGMSSSKVDKYKKQPGHMGPDPR-VTNCTVF 254 Query: 181 SVDDKRGLILVKGCVPGAKKNSW 203 ++ R LI +KG VPG+ + Sbjct: 255 RIESTRNLIFLKGAVPGSAGHPI 277 >gi|198423016|ref|XP_002125651.1| PREDICTED: similar to mitochondrial ribosomal protein L3 [Ciona intestinalis] Length = 392 Score = 187 bits (476), Expect = 8e-46, Method: Composition-based stats. Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 6/210 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH--RTLDKNGYMAVQVGAGEAKVK 59 R G V KLG+ ++ +G T++ + +C V+ + + AV +G A Sbjct: 136 RCGAVGIKLGVHPIWFKDGTYANCTLIQIQDCHVIKYFSKEEYNTKTAAVIIGGKNASPF 195 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++ F V K K F F + ++ L P G+ + +F GQ VD T +IG G Sbjct: 196 YKNEKYHEFCREAGVPVKAKCFRFLISENAALKP-GTEITAMHFKPGQFVDCTAQSIGYG 254 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G ++R +F G A R GS G Q G V K KKMAG++GG + L+V Sbjct: 255 FQGVIQRWHFAGGHARKDK-KWMRRPGSIGGSQ-IGWVMKGKKMAGQLGGTNEITRGLKV 312 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 + ++ + ++ VKG + G N ++ + DS Sbjct: 313 LRINTRYNVLYVKGRIAG-HINQFVKIADS 341 >gi|786153|dbj|BAA08831.1| ribosomal protein L3 [Bacillus subtilis] Length = 162 Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 74/165 (44%), Positives = 102/165 (61%), Gaps = 4/165 (2%) Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107 A+Q+G + + K +KP +G + +PK+ + E R + D VG F+ G+ Sbjct: 1 AIQLGFDDKREKLSNKPEKGHVAKAETAPKRFVKELRGVEMDA-YEVGQEVKVEIFSAGE 59 Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167 +VDVTG++ GKGF GA+KRH +HG S HR GS G DP RVFK K + GRM Sbjct: 60 IVDVTGVSKGKGFQGAIKRHGQSRGPMSHG-SRYHRRPGSMGPV-DPNRVFKGKLLPGRM 117 Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 GG ++TV+NLE+V VD +R L+L+KG VPGAKK S I V+ + KS Sbjct: 118 GGEQITVQNLEIVKVDAERNLLLIKGNVPGAKK-SLITVKSAVKS 161 >gi|77414571|ref|ZP_00790714.1| ribosomal protein L3 [Streptococcus agalactiae 515] gi|77159369|gb|EAO70537.1| ribosomal protein L3 [Streptococcus agalactiae 515] Length = 164 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 79/169 (46%), Positives = 106/169 (62%), Gaps = 6/169 (3%) Query: 45 GYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 GY AVQVG + + +KP +G + N +PK+ + EF K+ + L VG+ S F Sbjct: 1 GYEAVQVGFDDKREVLSNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGAELSVEQFE 57 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G +VDVTG + GKGF G +KRH HG S HR GS G P RVFKNK++A Sbjct: 58 AGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLA 115 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 GRMGGNRVTV+NLE+V V ++ ++L+KG VPGAKK S I ++ + K+A Sbjct: 116 GRMGGNRVTVQNLEIVQVIPEKNVVLIKGNVPGAKK-SLITIKSAVKAA 163 >gi|221054630|ref|XP_002258454.1| large ribosomal subunit protein l3, prokaryotic (50s)-like [Plasmodium knowlesi strain H] gi|193808523|emb|CAQ39226.1| large ribosomal subunit protein l3, prokaryotic (50s)-like, putative [Plasmodium knowlesi strain H] Length = 315 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 7/208 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R + +K+ M +++ G IP T++ + + +R LD G + + G + + + Sbjct: 92 RIQIRGKKIEMRSIFSPNGELIPATLIEIMPNVI--YRFLD-FGKVGIAYGKPLDESRWI 148 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP G + V + K + +G + SY + V+V G++ GKGF Sbjct: 149 LKPEIGQIAKVGCNYKNTCSLTLTPPQN--FVLGQIIDVSYLYNYKYVNVRGLSKGKGFC 206 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F THG S HR GS G GRV K KKM G+ G T+ NL+++ Sbjct: 207 GVIKRWGFRRGPMTHGSSH-HRKPGSIGASTHIGRVLKGKKMPGKHGNKYRTMINLKLLG 265 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209 ++ +R ILV GC+PG +NS++ V + Sbjct: 266 LNLERNEILVSGCIPG-NRNSYVTVTAT 292 >gi|115534155|ref|NP_498045.2| hypothetical protein C26E6.6 [Caenorhabditis elegans] gi|94730420|sp|P49404|RM03_CAEEL RecName: Full=Putative 39S ribosomal protein L3, mitochondrial gi|83921825|gb|AAA21160.3| Hypothetical protein C26E6.6 [Caenorhabditis elegans] Length = 403 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 79/232 (34%), Positives = 104/232 (44%), Gaps = 20/232 (8%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD---------------KNGY 46 R G+V RK+GM + EG RI TVL +D VV + + ++G Sbjct: 102 RVGLVVRKIGMLPQWTNEGNRILCTVLEVDENHVVSITSPEAWYKSSAVGKRKAFNRHGP 161 Query: 47 MA-VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105 M V VGAG + R F + K+KL F V +D L G +F V Sbjct: 162 MWRVTVGAGNDDPTKYTLGYRRQFVRAGIPVKEKLGCFLVTED-ALPSAGQPLDARHFGV 220 Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165 GQ V TG TI GF G M R G T + SHR GS G D R++ K+M G Sbjct: 221 GQYVTATGKTIDWGFQGGMHRWGMRGQP-TRRTTKSHRRIGSVGSVGD-ARIWPGKRMPG 278 Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 MG TV LE+V ++ + +I VKG VPG IL++D + K Sbjct: 279 HMGYEWRTVSGLEIVRINVDKQVIYVKGSVPG-DIGETILLKDCLQEEKRLK 329 >gi|156095889|ref|XP_001613979.1| 50S ribosomal protein L3 [Plasmodium vivax SaI-1] gi|148802853|gb|EDL44252.1| 50S ribosomal protein L3, putative [Plasmodium vivax] Length = 336 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 72/216 (33%), Positives = 115/216 (53%), Gaps = 4/216 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K+G ++++ G + VTV +++C V+ + + KNGY A+++G G V Sbjct: 75 RTGLLAYKVGCMSIWDVWGVKHAVTVAKINHCYVLNQKNITKNGYEALEIGIGNMNVVKQ 134 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SK G + + K+ EF+ D LPV FS +F+ GQ + ++ KGF Sbjct: 135 SKNNIGNYIKRKLGFIHKIKEFKCTSD-CFLPVQHKFSARHFSPGQNLFISSTIKSKGFC 193 Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179 GAMK+ NF G A+HG S +HRS GS + VF+NKKM +G V N ++ Sbjct: 194 GAMKKWNFSGKNASHGTESKAHRSLGSVSMGKTVNIVFRNKKMNTHIGEKTLVKCSNNKL 253 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++ + L+ +KG + G KN I + D+ A N Sbjct: 254 FRINSLQNLLFIKGPI-GGYKNKIIKISDAKGRAFN 288 >gi|124806820|ref|XP_001350840.1| mitochondrial ribosomal protein L3 precursor, putative [Plasmodium falciparum 3D7] gi|23496969|gb|AAN36520.1| mitochondrial ribosomal protein L3 precursor, putative [Plasmodium falciparum 3D7] Length = 341 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 73/216 (33%), Positives = 115/216 (53%), Gaps = 4/216 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 RSG++ K+G ++++ G + VTV+ +DNC V+ +T+ KNGY A+++G G V Sbjct: 80 RSGLLGYKVGCMSIWDVWGVKHAVTVVKIDNCYVINQKTISKNGYEALELGVGNMNVIKQ 139 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SK G F + K+ EF+ D LP+ FS +F+ GQ + ++ KGF Sbjct: 140 SKNNIGNFIKRKLGFIHKIKEFKCTSD-CFLPIHHKFSCRHFSPGQNLFISSGIKNKGFC 198 Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179 GAMK+ NF G +HG S +HRS GS + VF+NKKM +G V N ++ Sbjct: 199 GAMKKWNFSGKNKSHGTESKAHRSLGSVSMGKTINIVFRNKKMNTHIGEKSLVKCSNNKL 258 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++ + L+ +KG + G KN I + D+ + N Sbjct: 259 FRINSLKNLLFIKGTI-GGYKNKVIKISDAKGRSFN 293 >gi|12045004|ref|NP_072814.1| 50S ribosomal protein L3 [Mycoplasma genitalium G37] gi|1350743|sp|P47397|RL3_MYCGE RecName: Full=50S ribosomal protein L3 gi|3844745|gb|AAC71369.1| ribosomal protein L3 [Mycoplasma genitalium G37] gi|166078974|gb|ABY79592.1| ribosomal protein L3 [synthetic Mycoplasma genitalium JCVI-1.0] Length = 257 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 71/218 (32%), Positives = 113/218 (51%), Gaps = 8/218 (3%) Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63 G+ K+GM+ ++ + +P+T+++ + QV +T+ K+ Y A + K ++K Sbjct: 5 GIFGVKVGMSQIFTEQNECLPITIVYCEANQVAGIKTIAKDNYNATLLSFQTVDEKQLNK 64 Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSG 122 P +GFFS + + P K L E R +G +P F +G+ VDVT +T G+GF+G Sbjct: 65 PKQGFFSKLKLEPHKYLREIR---KMQGFELGKKITPQELFKIGEYVDVTSLTKGRGFTG 121 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGC---RQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 A+KR NF HG HR GS RVFK KKM+G G +VT++NL + Sbjct: 122 AIKRWNFKIGPLGHGAGYPHRFQGSVQAGRGGSSAQRVFKGKKMSGHYGHEQVTIQNLFI 181 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 V D+ L+LV G + G + +L++ + K K Sbjct: 182 VGFDEINKLVLVSGAIAGPE-GGIVLIKTAKKKTGKIK 218 >gi|323308966|gb|EGA62197.1| Mrpl9p [Saccharomyces cerevisiae FostersO] Length = 235 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 77/175 (44%), Positives = 107/175 (61%), Gaps = 2/175 (1%) Query: 2 RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 R G++ RK GM ++ G R T+L ++N +V++HRT + NGY A QVG G + Sbjct: 58 RCGLITRKKGMMPYFDKSTGERSAATILEVNNVEVIMHRTSEVNGYFACQVGYGSRHLSK 117 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVF-SPSYFTVGQLVDVTGMTIGKG 119 VS+ M G F+S V+PK+ + EFRV+ + + + + +F GQ VDV ++ GKG Sbjct: 118 VSRQMLGHFASKVVNPKEHVAEFRVKDEKGINTTWHIIETVFFFKEGQYVDVRSVSKGKG 177 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 F+G MKR+ F GLRA+HG SI HR GS G QDPGRV +KM G MG VT+ Sbjct: 178 FTGVMKRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTI 232 >gi|268574488|ref|XP_002642221.1| Hypothetical protein CBG18195 [Caenorhabditis briggsae] gi|187025223|emb|CAP35690.1| hypothetical protein CBG_18195 [Caenorhabditis briggsae AF16] Length = 402 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 74/213 (34%), Positives = 96/213 (45%), Gaps = 21/213 (9%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMA------------- 48 R G+V RK+GM + EG RI T+L +D VV + D Y A Sbjct: 102 RVGLVVRKIGMLPQWTKEGGRILCTILEVDENHVVGITSPDS-WYKASAIGKRKAFNRHG 160 Query: 49 ----VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V VGA N + R F+ V K+ L F V +D L +G +F Sbjct: 161 PMWRVTVGATNQDPTNYTSAYRKKFTRAGVPVKETLGCFLVTEDALPL-LGQPLDARHFE 219 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 VGQ V TG TI GF G M R G T + SHR GS G D R++ K+M Sbjct: 220 VGQYVTATGKTIDWGFQGGMHRWGMRGQP-TRRTTKSHRRIGSVGSVGD-ARIWPGKRMP 277 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197 G MG TV LE+V ++ + ++ VKG VPG Sbjct: 278 GHMGYEWKTVSGLEIVRINIDKQVMYVKGSVPG 310 >gi|156097364|ref|XP_001614715.1| 50S ribosomal protein L3 [Plasmodium vivax SaI-1] gi|148803589|gb|EDL44988.1| 50S ribosomal protein L3, putative [Plasmodium vivax] Length = 316 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 7/208 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R + +K+ M +++ G+ IP T++ + + +R LD G + + G + + + Sbjct: 93 RIQIRGKKIEMRSIFSPNGKLIPATLIEIMPNVI--YRFLD-FGKVGIAYGKPLEESRWI 149 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP G + V + K + +G + SY + V+V G++ GKGF Sbjct: 150 LKPEIGQIAKVGCNYKNTCSLTLTPPQN--FVLGQIIDVSYLYNYKYVNVRGLSKGKGFC 207 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F THG S HR GS G GRV K KKM G+ G T+ NL+++ Sbjct: 208 GVIKRWGFRRGPMTHGSSH-HRKPGSIGASTHIGRVLKGKKMPGKHGNKYNTMINLKLLG 266 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209 ++ +R ILV GC+PG +NS++ V + Sbjct: 267 LNLERNEILVSGCIPG-NRNSYVTVTAT 293 >gi|70924866|ref|XP_735214.1| 50S ribosomal protein L3 [Plasmodium chabaudi chabaudi] gi|56508675|emb|CAH83308.1| 50S ribosomal protein L3, putative [Plasmodium chabaudi chabaudi] Length = 237 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 73/216 (33%), Positives = 114/216 (52%), Gaps = 4/216 (1%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++ K+G +++I G + VTV+ +DNC V+ + + KNGY A++VG G V Sbjct: 11 RTGLLGYKVGCMSIWDIWGVKHAVTVVKIDNCYVLNQKNITKNGYEALEVGIGNMNVIKQ 70 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 SK G + + K+ EF+ D LPV FS +F+ GQ + ++ KGF Sbjct: 71 SKNNIGNYIKRRLGFIHKIREFKCTSD-CFLPVQHKFSARHFSPGQNLFISSSIKNKGFC 129 Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179 GAM++ NF G +HG S +HRS GS + VF+NKKM +G V N ++ Sbjct: 130 GAMQKWNFSGKNQSHGTESKAHRSLGSVSMGKTINIVFRNKKMNTHIGEKSLVKCSNNKL 189 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++ + L+ +KG + G KN I + D+ A N Sbjct: 190 FRINSLKNLLFIKGTI-GGYKNKIIKISDAKGRAFN 224 >gi|296005215|ref|XP_002808939.1| organelle ribosomal protein L3 precursor, putative [Plasmodium falciparum 3D7] gi|225631825|emb|CAX64220.1| organelle ribosomal protein L3 precursor, putative [Plasmodium falciparum 3D7] Length = 317 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 7/214 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 + + RK+ M +++ +G IP T++ + + +R LD G + + G + + + Sbjct: 94 KIQIRGRKIEMKSIFSPQGDLIPATLIEIMPNVI--YRFLD-FGKVGIAYGKPLDESRWI 150 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP G + V + K + +G + SY + V+V G++ GKGF Sbjct: 151 LKPEIGQIAKVGCNLKNTCSLTLTPPQN--FVLGQIIDVSYLYNYKYVNVRGLSKGKGFC 208 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F +HG S HR GS G GRV K KKM G+ G T+ NL+++ Sbjct: 209 GVIKRWGFKRGPMSHGSSH-HRKPGSIGASTHIGRVLKGKKMPGKHGNKYRTMINLKLLG 267 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++ +R ILV GC+PG +NS++ V + + VN Sbjct: 268 LNLERNEILVSGCIPG-NRNSYVTVTATRDNKVN 300 >gi|82753677|ref|XP_727774.1| ribosomal protein L3 [Plasmodium yoelii yoelii str. 17XNL] gi|23483784|gb|EAA19339.1| ribosomal protein L3, putative [Plasmodium yoelii yoelii] Length = 315 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 66/214 (30%), Positives = 108/214 (50%), Gaps = 7/214 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R + +K+ M +++ G+ IP T++ + +++R LD G + + G + + + Sbjct: 92 RIQIRGKKIEMRSIFSPNGKLIPATLIKIMPN--IIYRFLD-FGKVGIAYGKPLNESRWI 148 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP G S +N + K + +G + SY + V+V G++ GKGFS Sbjct: 149 LKPEIGQISKINSNLKNTCSLTLTPPQN--FVLGQIIDVSYLYNYKYVNVRGLSKGKGFS 206 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F THG S HR GS G GRV K KKM G+ G T+ NL+++ Sbjct: 207 GVIKRWGFHRGPMTHG-SGHHRKPGSIGASTHIGRVLKGKKMPGKDGNKYRTMINLKLLG 265 Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 ++ +R ILV GC+PG +NS + V + + +N Sbjct: 266 LNLERNEILVSGCIPG-NRNSDVTVTATRDNKIN 298 >gi|324516671|gb|ADY46600.1| 39S ribosomal protein L3 [Ascaris suum] Length = 401 Score = 181 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 74/234 (31%), Positives = 105/234 (44%), Gaps = 22/234 (9%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGY--------------- 46 R G++ARKLGM + G R+ T+L VV + Y Sbjct: 96 RVGLLARKLGMLPQWLNNGTRVLCTMLEFPENCVVSAIDPET-WYRKSIVGKKKAFGIQG 154 Query: 47 --MAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104 V VGA A + R F + K+ L F V +D + P G+ +F+ Sbjct: 155 PMWKVTVGAVNADPSKFTHVYRDIFMRQGLPVKQHLGSFVVTEDAVVAP-GTPLHVCHFS 213 Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 VGQ + VTG TI GF G M R G+ A + SHR GS G D RV+ K+M Sbjct: 214 VGQYIAVTGRTIDWGFQGGMHRWGMKGMPANR-TTKSHRRIGSIGSTGD-ARVWPGKRMP 271 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 G MG VT LEV+ ++ + ++ +KGCVPG + +LV+D + + K Sbjct: 272 GHMGYEWVTTSGLEVLRINPGKQVMYIKGCVPG-EVGEILLVKDCLQPSKRVKN 324 >gi|326505122|dbj|BAK02948.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 403 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 65/224 (29%), Positives = 107/224 (47%), Gaps = 18/224 (8%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD---------------KNGY 46 R G++A KLG + +G+++ +T+L + + V+ + + K G Sbjct: 115 RIGLIAVKLGSIPQWTNDGKKVYLTMLQVLDNHVIDYVPPEVIMSKSNNSVLKSRTKEGR 174 Query: 47 MAVQ-VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105 + + VGA + + + F + V PK+KL +F + + + P G+ S+F V Sbjct: 175 LGMAIVGALSSDPRLYTPSYLKLFENSGVPPKRKLTKFMITPNAAVQP-GTPLFASHFRV 233 Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165 G VDV TIG GF G MKR F G +HG + HR G+ G +D + K KMAG Sbjct: 234 GDYVDVGAKTIGYGFQGVMKRWGFKGGPRSHGATKFHRKRGTIGSGRD-RKPIKGMKMAG 292 Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 MG L+V +++K ++ V+G V + ++ V DS Sbjct: 293 HMGCKWRIQFGLKVWRINNKYNILYVQGPVIPGPTHCYVRVVDS 336 >gi|240279928|gb|EER43432.1| 50S ribosomal protein L3 [Ajellomyces capsulatus H143] Length = 247 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 71/185 (38%), Positives = 112/185 (60%), Gaps = 2/185 (1%) Query: 30 LDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD 89 + ++ KNGY AVQ+G G + V++PM G F++ V+PK+ + EFRV+ ++ Sbjct: 47 IGPNLPILTSHPSKNGYYAVQIGCGWKHERAVTRPMLGHFAANGVAPKRHIHEFRVKDEN 106 Query: 90 DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHR-SHGST 148 LLP+G + + ++F GQ VD + G GF+G MKRH F G +HGVS++HR S Sbjct: 107 GLLPIGEMINANWFQEGQYVDARSNSRGMGFAGVMKRHGFHGQDRSHGVSLTHRSMGSSG 166 Query: 149 GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRD 208 + RV+ KKMAG MG +VT++NL+V+ VD ++G+++V G V G K + ++D Sbjct: 167 PGQGGGSRVYPGKKMAGNMGNKQVTLQNLKVLKVDAEKGIVVVNGNVSGP-KGCIVKLQD 225 Query: 209 SFKSA 213 + K Sbjct: 226 ALKKP 230 >gi|238601104|ref|XP_002395321.1| hypothetical protein MPER_04643 [Moniliophthora perniciosa FA553] gi|215465855|gb|EEB96251.1| hypothetical protein MPER_04643 [Moniliophthora perniciosa FA553] Length = 259 Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats. Identities = 85/204 (41%), Positives = 112/204 (54%), Gaps = 24/204 (11%) Query: 29 HLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKD 88 + V + + Y AVQV A + K ++ MRG F V K+ + EF + D Sbjct: 5 QVTANIVTARKNASE--YHAVQVAASDRPFKTTTQQMRGHFRKAQVPCKRVVREFPITPD 62 Query: 89 DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148 +PVG+ S +F GQ VDV +IGKGF+G MKR F GLRA+HGVSISHRS G+T Sbjct: 63 -AHVPVGTTLSAIHFVPGQFVDVIAKSIGKGFAGGMKRWGFKGLRASHGVSISHRSIGAT 121 Query: 149 GCRQ--------------------DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188 G Q +PGRV+ KKM GR+GG R+T +NL VV VD + L Sbjct: 122 GAHQVLYQKDIFVAYLIDKASVSRNPGRVWPGKKMPGRLGGERITTQNLAVVRVDSELNL 181 Query: 189 ILVKGCVPGAKKNSWILVRDSFKS 212 I VKG VPG +S ++V+D+ K Sbjct: 182 IYVKGAVPGVD-DSHVMVKDAKKK 204 >gi|152940799|gb|ABS44864.1| putative 50S ribosomal protein L3 [Oryza sativa Japonica Group] Length = 188 Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats. Identities = 68/180 (37%), Positives = 98/180 (54%), Gaps = 2/180 (1%) Query: 31 DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDD 90 V +T +GY AVQVG + + +++P G P + L EFR+Q D Sbjct: 2 GGNVVTQVKTAATDGYDAVQVGYHGVREEKLTRPELGHLGKAGAPPLRHLQEFRLQSVDG 61 Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150 P + F G LVD++G +IGKGF G +KRHNF THG S SHR+ GS G Sbjct: 62 YDPGQPLDFADMFKEGDLVDISGKSIGKGFQGGIKRHNFKRGLMTHG-SKSHRALGSIGA 120 Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 PGRV+K KKM GRMGG + ++ L++V +D+ ++++KG VPG N + + + Sbjct: 121 GTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDNDLKVVMIKGAVPGKPGN-LLRIAPAK 179 >gi|325116477|emb|CBZ52031.1| putative 50S ribosomal protein L3 [Neospora caninum Liverpool] Length = 447 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 6/202 (2%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ARK+ MT ++ +G+ PVT+L + +V + G V A + + V +P Sbjct: 199 LLARKIDMTACFSPDGQAEPVTLLQVIPATIVQ---FLEYGKAVVSYDAPKRRRLFVKRP 255 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 + G V + + V+ ++ + +G V S + V V + KGF G + Sbjct: 256 VLGKLQRVGAT-GFETATLTVRPPNEFV-LGQVLDVSSLMGAKHVHVRALKKAKGFQGIV 313 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 RH F THG S HR GS G DPGRV +MAGR TV+NL V+ + Sbjct: 314 SRHGFHRGPMTHG-STHHRGPGSVGAGTDPGRVLPGTRMAGRDKAKYATVRNLRVLGFNP 372 Query: 185 KRGLILVKGCVPGAKKNSWILV 206 K+ L++V+G VPG + + V Sbjct: 373 KQNLLIVRGSVPGWDMRTVVHV 394 >gi|56753667|gb|AAW25036.1| SJCHGC01793 protein [Schistosoma japonicum] Length = 391 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 30/237 (12%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTL-DKNGYMAVQ---------- 50 R G++A KLG+ ++ G ++ TV + + + + + + Y+++ Sbjct: 94 RCGLIAIKLGVYPLWTKTGEKMDCTVFQVPDNHALRYTPPSEIDKYISLLHPRHYWLNSK 153 Query: 51 ---------------VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG 95 VGA A + N + V PK+K+ F V D L P G Sbjct: 154 RPPSWITQKRWGIQLVGAFSADLLNSLLNGVAYLKEAGVPPKRKISRFLVSPDAALKP-G 212 Query: 96 SVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 + S +F VG +D+T TI +GF G ++R G A HG + HR GS P Sbjct: 213 TPLSVHHFRVGDYLDITARTINRGFQGVIERWGMKGGPAAHGSTKFHRRMGSAAGCGGP- 271 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + + K+M G MG +++ + +V ++ K GLI V G PG +++ L+ DS+ + Sbjct: 272 -IARGKRMPGVMGNRFRSLRGVMIVRINPKLGLIYVPGATPGPV-HAYCLLHDSWLA 326 >gi|256087284|ref|XP_002579802.1| 50S ribosomal protein L3 [Schistosoma mansoni] gi|238665289|emb|CAZ36041.1| 50S ribosomal protein L3, putative [Schistosoma mansoni] Length = 394 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 65/235 (27%), Positives = 110/235 (46%), Gaps = 30/235 (12%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTL-DKNGYMAVQ---------- 50 R G++A KLG+ ++ G+++ T+ + + + + + + Y+++ Sbjct: 96 RCGLIAIKLGVYPLWTKTGKKMDCTIFQIPDNHAIRYTPPSEIDKYISLLHPRHYWLNNK 155 Query: 51 ---------------VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG 95 VGA A + G F + PK+K+ F V D L P G Sbjct: 156 RPPSWITQKRWGIQLVGAFSADPIEFTSEWCGLFKEAGIPPKRKISRFLVSPDAALKP-G 214 Query: 96 SVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 + S ++F VG +D+T TI +GF G ++R G A HG + HR GS R P Sbjct: 215 TPLSVNHFRVGDYLDITARTINRGFEGVIERWGMKGGPAAHGSTKFHRRMGSAAGRGGP- 273 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 + + K+MAG MG +++ + +V ++ K GLI V G PG +S+ L+ DS+ Sbjct: 274 -IVRGKRMAGVMGNRFRSLRGVMIVRINPKLGLIYVPGTTPGPV-HSYCLLNDSW 326 >gi|170596208|ref|XP_001902682.1| Mitochondrial 39S ribosomal protein L3 [Brugia malayi] gi|158589507|gb|EDP28470.1| Mitochondrial 39S ribosomal protein L3, putative [Brugia malayi] Length = 424 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 68/237 (28%), Positives = 105/237 (44%), Gaps = 34/237 (14%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-------------GYMA 48 R G++ARK+GM + ++G R T+L V+ + Y A Sbjct: 111 RIGMLARKIGMFPQWAVDGTRFLCTLLEFPKNLVISAIDPETYYRISMVGRRKAYGRYGA 170 Query: 49 ---VQVGAGEAKVKNVSKPMRGFFSSVNVS--------------PKKKLFEFRVQKDDDL 91 V VGA + + R F V+ KK + F V +D + Sbjct: 171 RWRVTVGAVDGDPTKFTARYRATFERHGVNFVAVFIFLILSGFPVKKHIASFLVTEDAVV 230 Query: 92 LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151 P G+ +F VGQ + +TG TI GF G M R F G+ A G + SHR G+ G + Sbjct: 231 QP-GTELHVCHFKVGQYITITGHTIDWGFQGGMHRWGFKGMPA-RGTTKSHRRIGAIGSK 288 Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRD 208 D RV K+M G MG ++ LEV+ ++ ++ ++ V G VPG + +L++D Sbjct: 289 GD-ARVRPGKRMPGHMGYEWRSIPGLEVLRINPEKQVMYVNGSVPG-ETGEILLIKD 343 >gi|290462065|gb|ADD24080.1| 39S ribosomal protein L3, mitochondrial [Lepeophtheirus salmonis] Length = 351 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 71/242 (29%), Positives = 116/242 (47%), Gaps = 29/242 (11%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMA------------ 48 +RSG++A+K+G+ ++ G RI T+L + + VV + ++ Y + Sbjct: 77 IRSGIIAQKIGLAPLWTKSGVRIMSTLLQVKDNHVVRYIPAEE--YASTHVGEKIKAPKG 134 Query: 49 -----------VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV 97 + VGA +K G F+ VSPK+ L F V + L P G+ Sbjct: 135 ITDTPRGLNPVLVVGADSRDPSTFTKGYCGLFNGSGVSPKRILSRFIVSPNAILKP-GTP 193 Query: 98 FSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRAT-HGVSISHRSHGSTGCRQDPGR 156 S+F VG VDV G I +GF G MKR F G+ + G + +HR GS G R Sbjct: 194 LYASHFQVGAYVDVRGTGIRRGFQGVMKRWGFHGMPSDNRGATKTHRRPGSIGSGCQKSR 253 Query: 157 VFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGC-VPGAKKNSWILVRDSFKSAVN 215 V+ +K+ G MGGN++ + L+++ ++ K G++ V G +PG ++ V D+ + Sbjct: 254 VWPGQKLPGLMGGNKMIMPALQILRINHKEGVLYVTGQGIPG-NTGDFVQVFDTRHPVKS 312 Query: 216 CK 217 K Sbjct: 313 LK 314 >gi|330902741|gb|EGH33754.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. japonica str. M301072PT] Length = 143 Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 73/144 (50%), Positives = 92/144 (63%), Gaps = 3/144 (2%) Query: 69 FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128 F+ NV+ + + EFR+++ D G F GQLVDVTG + GKGF G +KR N Sbjct: 1 FAKANVAAGRTVMEFRLEEGD--YQAGDQIKAEIFAAGQLVDVTGQSKGKGFQGTIKRWN 58 Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188 F G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV VD +R L Sbjct: 59 FRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVVRVDAERNL 118 Query: 189 ILVKGCVPGAKKNSWILVRDSFKS 212 +LVKG VPGA + + VR + K+ Sbjct: 119 LLVKGAVPGATGGNLV-VRPAAKA 141 >gi|217073974|gb|ACJ85347.1| unknown [Medicago truncatula] Length = 224 Score = 174 bits (442), Expect = 7e-42, Method: Composition-based stats. Identities = 68/167 (40%), Positives = 87/167 (52%), Gaps = 2/167 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 GV+ KLGM + G +PVTV+ + V + +GY AVQVG + + + Sbjct: 57 VGVMGTKLGMMSFFQPNGEVVPVTVVGFKEGNIVTQIKADATDGYNAVQVGYRRVRDRKL 116 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G P + L EFR+Q D P + F G LVDV+G TIGKGF Sbjct: 117 TKPEMGHLEKAGAIPMRHLQEFRLQSVDGFEPNQRLVFDELFNEGDLVDVSGTTIGKGFQ 176 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168 G +KRHNF +HG S SHR GS G PGRV+K KKM G+ G Sbjct: 177 GGIKRHNFKRGPMSHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGKDG 222 >gi|148927108|ref|ZP_01810738.1| ribosomal protein L3 [candidate division TM7 genomosp. GTL1] gi|147887427|gb|EDK72871.1| ribosomal protein L3 [candidate division TM7 genomosp. GTL1] Length = 180 Score = 174 bits (441), Expect = 9e-42, Method: Composition-based stats. Identities = 75/180 (41%), Positives = 100/180 (55%), Gaps = 5/180 (2%) Query: 26 TVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV 85 T++ C V +T DK+GY AVQ+G GE K N+S + G + V+PK Sbjct: 2 TLVQAGPCAVTQVKTADKDGYNAVQIGYGEGK--NLSNAVAGHVKAAKVTPKVIREIRV- 58 Query: 86 QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145 + D + VG F VG VDVTG + GKGF+G +KRHNF + THG + R Sbjct: 59 -NELDEIKVGDQLGVDLFIVGDNVDVTGTSKGKGFAGTVKRHNFNTSKKTHGGNGYVRKV 117 Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWIL 205 GS G P ++FK K+MAGRMG VTVKNL V +D + LI +KG VPG +K ++ Sbjct: 118 GSIGSM-YPQKIFKGKRMAGRMGHETVTVKNLSVAYIDAESNLIGLKGAVPGPRKGIVVI 176 >gi|330903578|gb|EGH34150.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. japonica str. M301072PT] Length = 139 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 71/137 (51%), Positives = 88/137 (64%), Gaps = 2/137 (1%) Query: 69 FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128 F+ NV+ + + EFR+++ D G F GQLVDVTG + GKGF G +KR N Sbjct: 1 FAKANVAAGRTVMEFRLEEGD--YQAGDQIKAEIFAAGQLVDVTGQSKGKGFQGTIKRWN 58 Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188 F G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV VD +R L Sbjct: 59 FRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVVRVDAERNL 118 Query: 189 ILVKGCVPGAKKNSWIL 205 +LVKG VPGA + +L Sbjct: 119 LLVKGAVPGATGGNLVL 135 >gi|194767737|ref|XP_001965971.1| GF11271 [Drosophila ananassae] gi|190619814|gb|EDV35338.1| GF11271 [Drosophila ananassae] Length = 354 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 74/233 (31%), Positives = 115/233 (49%), Gaps = 17/233 (7%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49 R G +ARK+G ++ G +I T+L + + ++ + +K N + + Sbjct: 91 RCGTIARKIGEYPLWLNNGEKIRTTLLQIIDNHIISYIPPEKYSPAHYPNVKNVNKFGCL 150 Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109 VGAG ++K G F V PKK L F V + L P G+ + +++ VG+ V Sbjct: 151 LVGAGTINPTWLTKEYCGIFHESRVMPKKMLARFLVSPEAALHP-GTALNVAHYRVGEFV 209 Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169 DV G TI GF G +KR F G+ A+HGV+ +HR G+ G + GRV+ KM GRMG Sbjct: 210 DVRGKTIDYGFQGVVKRFGFKGMPASHGVTKTHRRVGNIGGGGEKGRVWPGTKMPGRMGS 269 Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCKGKVS 221 K L+V+ K ++ V+G VPG + + D+ + K K+S Sbjct: 270 RWRINKGLQVLRTYLKYNVMWVQGSAVPGP-TGGIVYLYDTILP--HRKKKIS 319 >gi|11465422|ref|NP_045187.1| ribosomal protein L3 [Cyanidium caldarium] gi|42559313|sp|Q9TLT2|RK3_CYACA RecName: Full=50S ribosomal protein L3, chloroplastic gi|6466325|gb|AAF12907.1|AF022186_29 unknown [Cyanidium caldarium] Length = 215 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 73/200 (36%), Positives = 101/200 (50%), Gaps = 5/200 (2%) Query: 7 ARKLGMTCVYNIEGRRIPVTVL-HLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 KLGMT + + G +PVT++ C + T N + + G +KP Sbjct: 10 GVKLGMTQILDNFGNLVPVTIVSQPKPCVITRVTTS-LNSQQKLIIQIGCYSDFRANKPT 68 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G+F +V + L EF+ K+++ VG QLV V+ TIGKGF+G K Sbjct: 69 IGYFKKQSVPNLRYLHEFQTYKNNE-YQVGKSLDLKEL-DQQLVQVSAYTIGKGFAGYQK 126 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 +H F +HG S SHR GS G PGRVF KMAGR+G +R ++KNL V+ VD Sbjct: 127 KHKFSRGAMSHG-SKSHRRPGSIGAGTTPGRVFPGVKMAGRLGFSRRSIKNLLVLKVDLT 185 Query: 186 RGLILVKGCVPGAKKNSWIL 205 L L+KG VPG N ++ Sbjct: 186 NKLFLLKGSVPGKYGNLLLV 205 >gi|221125421|ref|XP_002162736.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 271 Score = 171 bits (435), Expect = 5e-41, Method: Composition-based stats. Identities = 68/217 (31%), Positives = 114/217 (52%), Gaps = 10/217 (4%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQV--VVHRTLD--KNGYMAVQVGAGEA 56 +R G + KLG++ ++ G VT++ + +CQV D +G + +G + Sbjct: 13 IRVGALGIKLGVSVLWTKNGFCHMVTLVQIKDCQVIDTQISCEDGGNDGITQMLLGCCDI 72 Query: 57 KVKNV-SKPMRGF---FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112 NV +K R + N+ PK+ F V K+ L P G+ + +F GQ V V Sbjct: 73 TDDNVLAKLPRDHVLWYDQRNLFPKQYWTGFPVTKNALLFP-GTKITSLHFQPGQHVVVQ 131 Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172 G++I KGF G M+R G +HG +++HR G TG QDPGR+F K MAG +G + Sbjct: 132 GISIDKGFQGVMRRWGMKGQPQSHGQTLTHRKMGGTGGGQDPGRIFPGKHMAGHVGRDYA 191 Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 TV L ++ ++ K ++ ++G +PG + ++ ++DS Sbjct: 192 TVGPLRILRINTKFNVLYIRGGIPG-EIGGFLKIKDS 227 >gi|260798664|ref|XP_002594320.1| hypothetical protein BRAFLDRAFT_201187 [Branchiostoma floridae] gi|229279553|gb|EEN50331.1| hypothetical protein BRAFLDRAFT_201187 [Branchiostoma floridae] Length = 242 Score = 171 bits (435), Expect = 5e-41, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 8/188 (4%) Query: 28 LHLDNCQVVVHRTLD----KNGYMA-VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFE 82 + + +C V+ + ++ + + +G +S+ F + PK+K+ E Sbjct: 1 VQVQDCHVIRYIPVEDSDDPDKKQGMLTLGHRSCSPFYLSEEYLRMFEKAGIPPKRKIAE 60 Query: 83 FRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISH 142 F+V D + P G+ ++F GQ VDV G TI KGF G MKRH F G A+HG + +H Sbjct: 61 FKVSMDAAIKP-GTPLYAAHFRPGQYVDVYGKTIDKGFQGVMKRHGFKGQPASHGQTKTH 119 Query: 143 RSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNS 202 R G+ G GRV K+ G MG + L++ V+ K ++ V G VPG + Sbjct: 120 RRPGAIGTAGH-GRVLPGTKLPGPMGNVVRYTRGLKIWRVNTKHNILYVNGQVPG-HNDG 177 Query: 203 WILVRDSF 210 W+ V DS Sbjct: 178 WVKVYDSI 185 >gi|70943067|ref|XP_741624.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56520122|emb|CAH76721.1| large ribosomal subunit protein L3, prokaryotic (50S)-like, putative [Plasmodium chabaudi chabaudi] Length = 223 Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats. Identities = 65/211 (30%), Positives = 107/211 (50%), Gaps = 7/211 (3%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 + +K+ M +++ G+ IP T++ + +++R LD G + + G + + + KP Sbjct: 3 IRGKKIEMRSIFSPNGKLIPATLIKIMPN--IIYRFLD-FGKVGIAYGKPLNESRWILKP 59 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G S +N + K + +G + SY + V+V G++ GKGFSG + Sbjct: 60 EIGQISKINSNLKNTCSLTLTPPQN--FVLGQIIDVSYLYNYKYVNVRGLSKGKGFSGVI 117 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR F THG S HR GS G GRV K KKM G+ G T+ NL+++ ++ Sbjct: 118 KRWGFRRGPMTHG-SGHHRKPGSIGASTHIGRVLKGKKMPGKDGNKFRTMINLKLLGLNL 176 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +R ILV GC+PG +NS + V + + +N Sbjct: 177 ERNEILVSGCIPG-NRNSDVTVTATRDNKIN 206 >gi|297581436|ref|ZP_06943359.1| ribosomal protein L3 [Vibrio cholerae RC385] gi|297534274|gb|EFH73112.1| ribosomal protein L3 [Vibrio cholerae RC385] Length = 124 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 63/125 (50%), Positives = 82/125 (65%), Gaps = 1/125 (0%) Query: 88 DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGS 147 + + VGS + F + VDVTG + GKGF GA+KR NF THG S+SHR+ GS Sbjct: 1 NGEEFAVGSELTVELFNEVKKVDVTGTSKGKGFQGAVKRWNFRTQDMTHGNSLSHRAPGS 60 Query: 148 TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVR 207 G Q PGRVFK KKMAG MG RVT +NLE+V VD +R L+L+KG VPGA + ++V+ Sbjct: 61 IGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVDAERNLLLIKGAVPGATGGN-VIVK 119 Query: 208 DSFKS 212 + K+ Sbjct: 120 PAVKA 124 >gi|68073103|ref|XP_678466.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56498943|emb|CAH95840.1| large ribosomal subunit protein L3, prokaryotic (50S)-like, putative [Plasmodium berghei] Length = 221 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 100/199 (50%), Gaps = 6/199 (3%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R + +K+ M +++ G+ IP T++ + +++R LD G + + G + + + Sbjct: 29 RIQIRGKKIEMRSIFSPNGKLIPATLIKIMPN--IIYRFLD-FGKVGIAYGKPLNESRWI 85 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 KP G S +N + K + +G + SY + V+V G++ GKGFS Sbjct: 86 LKPEIGQISKINSNFKNTCSLTLTPPQN--FVLGQIIDVSYLYNYKYVNVRGLSKGKGFS 143 Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G +KR F THG S HR GS G GRV K KKM G+ G T+ NL+++ Sbjct: 144 GVIKRWGFHRGPMTHG-SGHHRKPGSIGASTHVGRVLKGKKMPGKDGNKFRTMINLKLLG 202 Query: 182 VDDKRGLILVKGCVPGAKK 200 ++ +R ILV GC+PG + Sbjct: 203 LNLERNEILVSGCIPGNRN 221 >gi|221485858|gb|EEE24128.1| 50S ribosomal protein L3, putative [Toxoplasma gondii GT1] Length = 394 Score = 169 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 6/202 (2%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ARK+ MT ++ +G+ PVT+L + +V + G V + V +P Sbjct: 146 LLARKIDMTACFSPDGQAEPVTLLQVLPATIVQ---FLEYGKAVVSYDLPRRRRLFVKRP 202 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G V + + V+ ++ + +G + S + V V + GKGF G + Sbjct: 203 TLGKLQRVGAT-GFETATVTVRPPNEFV-LGQILDVSSLLGAKRVHVRAVKKGKGFQGTV 260 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 R F THG S HR GS G DPGRV +MAGR TV+NL V+ + Sbjct: 261 SRFGFHRGPMTHG-STHHRGPGSVGAGTDPGRVLPGTRMAGRDKAKVATVRNLRVLGFNP 319 Query: 185 KRGLILVKGCVPGAKKNSWILV 206 K+ L++V+G VPG + + V Sbjct: 320 KQNLLIVRGSVPGWDMRTVVRV 341 >gi|221503775|gb|EEE29459.1| 50S ribosomal protein L3, putative [Toxoplasma gondii VEG] Length = 383 Score = 169 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 6/202 (2%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ARK+ MT ++ +G+ PVT+L + +V + G V + V +P Sbjct: 135 LLARKIDMTACFSPDGQAEPVTLLQVLPATIVQ---FLEYGKAVVSYDLPRRRRLFVKRP 191 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G V + + V+ ++ + +G + S + V V + GKGF G + Sbjct: 192 TLGKLQRVGAT-GFETATVTVRPPNEFV-LGQILDVSSLLGAKRVHVRAVKKGKGFQGTV 249 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 R F THG S HR GS G DPGRV +MAGR TV+NL V+ + Sbjct: 250 SRFGFHRGPMTHG-STHHRGPGSVGAGTDPGRVLPGTRMAGRDKAKVATVRNLRVLGFNP 308 Query: 185 KRGLILVKGCVPGAKKNSWILV 206 K+ L++V+G VPG + + V Sbjct: 309 KQNLLIVRGSVPGWDMRTVVRV 330 >gi|237835099|ref|XP_002366847.1| 50S ribosomal protein L3, putative [Toxoplasma gondii ME49] gi|211964511|gb|EEA99706.1| 50S ribosomal protein L3, putative [Toxoplasma gondii ME49] Length = 377 Score = 169 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 6/202 (2%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ARK+ MT ++ +G+ PVT+L + +V + G V + V +P Sbjct: 129 LLARKIDMTACFSPDGQAEPVTLLQVLPATIVQ---FLEYGKAVVSYDLPRRRRLFVKRP 185 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 G V + + V+ ++ + +G + S + V V + GKGF G + Sbjct: 186 TLGKLQRVGAT-GFETATVTVRPPNEFV-LGQILDVSSLLGAKRVHVRAVKKGKGFQGTV 243 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 R F THG S HR GS G DPGRV +MAGR TV+NL V+ + Sbjct: 244 SRFGFHRGPMTHG-STHHRGPGSVGAGTDPGRVLPGTRMAGRDKAKVATVRNLRVLGFNP 302 Query: 185 KRGLILVKGCVPGAKKNSWILV 206 K+ L++V+G VPG + + V Sbjct: 303 KQNLLIVRGSVPGWDMRTVVRV 324 >gi|308801038|ref|XP_003075300.1| putative 50S ribosomal protein L3 (ISS) [Ostreococcus tauri] gi|116061854|emb|CAL52572.1| putative 50S ribosomal protein L3 (ISS) [Ostreococcus tauri] Length = 338 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 70/176 (39%), Positives = 94/176 (53%), Gaps = 6/176 (3%) Query: 37 VHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGS 96 +T +GY AVQVG K + ++KP G + L EFR++ + VG+ Sbjct: 157 RVKTEATDGYNAVQVGYDAVKERQLTKPEAGHCKKAGAPALRHLEEFRLRDAPE-YEVGA 215 Query: 97 VFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 + F G VDV G +IGKGF GA+KR+ F THG S SHR HGS G +PG Sbjct: 216 KINVSELFKEGDKVDVRGRSIGKGFQGAVKRYGFSRGLMTHG-SKSHRQHGSIGSGTNPG 274 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 R++ K+M G MG VT+K L V+SV + I+VKG VPG K + V + K Sbjct: 275 RIYPGKRMHGHMGDEMVTIKGLTVMSV--EDDCIIVKGNVPG-KSGALCKVTPNKK 327 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDK 43 G K GMT V+ EG +PVTV+ + + V R + Sbjct: 37 VGAFGSKAGMTHVFTPEGLCVPVTVIAVREGNVVTQVRDGEN 78 >gi|323354876|gb|EGA86709.1| Mrpl9p [Saccharomyces cerevisiae VL3] Length = 148 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 73/148 (49%), Positives = 101/148 (68%), Gaps = 1/148 (0%) Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M G F+S V+PK+ + EFRV+ + L+P G++ PS+F GQ VDV ++ GKGF+G M Sbjct: 1 MLGHFASKVVNPKEXVAEFRVKDEKGLIPPGTLLKPSFFKEGQYVDVRSVSKGKGFTGVM 60 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR+ F GLRA+HG SI HR GS G QDPGRV +KM G MG VT++N++V+ VDD Sbjct: 61 KRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVLKVDD 120 Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212 + +I VKG V G KNS++ ++D+ K Sbjct: 121 ENNVIWVKGSVAGP-KNSFVKIQDAIKK 147 >gi|330722458|gb|EGH00293.1| LSU ribosomal protein L3p (L3e) [gamma proteobacterium IMCC2047] Length = 141 Score = 168 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 69/142 (48%), Positives = 86/142 (60%), Gaps = 4/142 (2%) Query: 71 SVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130 + + E + D + + VG + F GQ VDVTG + GKGF+G +KR NF Sbjct: 2 KAGSALNESRVE---EADLEGVNVGDELTVERFEAGQKVDVTGQSKGKGFAGGVKRWNFK 58 Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190 ATHG SISHR+ GS G Q PGRVFK KKMAG MG +VT + LE+V VD +R LIL Sbjct: 59 MQDATHGNSISHRAPGSIGQCQTPGRVFKGKKMAGHMGAAQVTTQGLEIVRVDAERNLIL 118 Query: 191 VKGCVPGAKKNSWILVRDSFKS 212 VKG VPGA +LVR + K+ Sbjct: 119 VKGAVPGAPGGD-VLVRPTVKA 139 >gi|328478154|gb|EGF48001.1| 50S ribosomal protein L3 [Lactobacillus rhamnosus MTCC 5462] Length = 159 Score = 166 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 58/163 (35%), Positives = 87/163 (53%), Gaps = 5/163 (3%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 +G G+ + +KP G + +PK+ + E R VGS F G +VD Sbjct: 1 MGYGDMREVLTNKPSVGHAKKADTTPKRFVREIR-DVALSDYEVGSEVKADEFAAGDIVD 59 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 VTG + G G+ G +K+ HG S HR GS G +VFK KK+ GRMG + Sbjct: 60 VTGTSKGHGYQGNIKKDGQSRGPMAHG-SRYHRRPGSLGAI--INKVFKGKKLPGRMGNH 116 Query: 171 RVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 T++NL+VV+ D + ++L+KG VPGA K S++ +R + K+A Sbjct: 117 TRTMQNLQVVAADTEHNVLLIKGNVPGANK-SFVTIRSAVKAA 158 >gi|30468182|ref|NP_849069.1| ribosomal protein L3 [Cyanidioschyzon merolae strain 10D] gi|30409282|dbj|BAC76231.1| 50S ribosomal protein L3 [Cyanidioschyzon merolae strain 10D] Length = 203 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 71/200 (35%), Positives = 104/200 (52%), Gaps = 28/200 (14%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++A K+GM+ +++ +G +PVT + +V+ HRT +K+GY A+ V Sbjct: 28 LLATKIGMSQLFDEKGNALPVTWVKSGVHEVIDHRTPEKHGYTALVV------------- 74 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSY-FTVGQLVDVTGMTIGKGFSGA 123 + + EFRV K P+G S F +GQ V V TIGKGF+G Sbjct: 75 ----------RYQHWIREFRV-KHLSAYPIGRRLDLSTCFQIGQKVSVKAKTIGKGFAGY 123 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 KRH+F +HG S +HR GS G PGRVF +MAGR+GGN T+K LE++ + Sbjct: 124 QKRHHFARGPMSHG-SKNHRQPGSIGAGTFPGRVFPGTRMAGRLGGNFCTIKGLEILQIQ 182 Query: 184 DKRGLILVKGCVPGAKKNSW 203 + + + +KG VPG N Sbjct: 183 NDQ--MALKGAVPGKVGNLL 200 >gi|48645|emb|CAA32542.1| ribosomal protein L3 [Yersinia pseudotuberculosis] Length = 129 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 66/131 (50%), Positives = 84/131 (64%), Gaps = 2/131 (1%) Query: 82 EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSIS 141 EFR+ + + G S F + VDVTG + GKGF+G +KR NF ATHG S+S Sbjct: 1 EFRLPEGQEFT-AGQEISVEIFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLS 59 Query: 142 HRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKN 201 HR GS G Q PG+VFK KKMAG MG RVTV++L+VV VD +R L+LVKG VPGA Sbjct: 60 HRVPGSIGQNQTPGKVFKGKKMAGHMGDERVTVQSLDVVRVDAERNLLLVKGAVPGATGG 119 Query: 202 SWILVRDSFKS 212 + I V+ + K+ Sbjct: 120 NLI-VKPAVKA 129 >gi|254449764|ref|ZP_05063201.1| ribosomal protein L3 [Octadecabacter antarcticus 238] gi|198264170|gb|EDY88440.1| ribosomal protein L3 [Octadecabacter antarcticus 238] Length = 163 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 75/129 (58%), Positives = 96/129 (74%), Gaps = 1/129 (0%) Query: 87 KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146 +++L+ VG S++ GQ VDV+G +IGKGF+GAMKRHNF GLRATHGVS+SHRSHG Sbjct: 2 SEENLIAVGEEIIASHYFEGQFVDVSGTSIGKGFAGAMKRHNFSGLRATHGVSVSHRSHG 61 Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206 STG QDPG+VFK KKMAG MG ++T +NL V+ D RGLI+VKG VPG+ K W+ V Sbjct: 62 STGQCQDPGKVFKGKKMAGHMGSAKITTQNLVVIKTDLDRGLIMVKGAVPGS-KGGWVTV 120 Query: 207 RDSFKSAVN 215 +D+ K + Sbjct: 121 KDAVKKPAS 129 >gi|2500228|sp|P72233|RL3_PLARO RecName: Full=50S ribosomal protein L3 gi|1679861|emb|CAA67347.1| ribosomal protein L3 [Planobispora rosea] Length = 140 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 57/136 (41%), Positives = 80/136 (58%), Gaps = 1/136 (0%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ +KLGMT V++ + R +PVTV+ C V RT +K+GY AVQ+G G+ + V+ Sbjct: 6 KGVLGKKLGMTQVFDADNRMVPVTVVEAGPCVVTRVRTPEKDGYSAVQLGFGQIDPRKVN 65 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 KP+ + ++P++ E R D +G F GQ VDVTG + GKGF+G Sbjct: 66 KPLGDYLRKHEITPRRYFTEIRTD-DASEYTIGQEVLADTFEAGQFVDVTGKSKGKGFAG 124 Query: 123 AMKRHNFGGLRATHGV 138 MKRH FGGL A+HG Sbjct: 125 VMKRHGFGGLGASHGT 140 >gi|125987858|sp|Q85FW3|RK3_CYAME RecName: Full=50S ribosomal protein L3, chloroplastic Length = 182 Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 71/200 (35%), Positives = 104/200 (52%), Gaps = 28/200 (14%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++A K+GM+ +++ +G +PVT + +V+ HRT +K+GY A+ V Sbjct: 7 LLATKIGMSQLFDEKGNALPVTWVKSGVHEVIDHRTPEKHGYTALVV------------- 53 Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSY-FTVGQLVDVTGMTIGKGFSGA 123 + + EFRV K P+G S F +GQ V V TIGKGF+G Sbjct: 54 ----------RYQHWIREFRV-KHLSAYPIGRRLDLSTCFQIGQKVSVKAKTIGKGFAGY 102 Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 KRH+F +HG S +HR GS G PGRVF +MAGR+GGN T+K LE++ + Sbjct: 103 QKRHHFARGPMSHG-SKNHRQPGSIGAGTFPGRVFPGTRMAGRLGGNFCTIKGLEILQIQ 161 Query: 184 DKRGLILVKGCVPGAKKNSW 203 + + + +KG VPG N Sbjct: 162 NDQ--MALKGAVPGKVGNLL 179 >gi|156083276|ref|XP_001609122.1| ribosomal protein L3 domain containing protein [Babesia bovis T2Bo] gi|154796372|gb|EDO05554.1| ribosomal protein L3 domain containing protein [Babesia bovis] Length = 323 Score = 161 bits (407), Expect = 8e-38, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 91/200 (45%), Gaps = 9/200 (4%) Query: 9 KLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGF 68 K+G +++ +G VT L + C + GY V G + + + G Sbjct: 121 KVG--QIWSPDGHVETVTALKVLPCTICEFMDF---GYALVAYGKPSWEKRWNLRSELGK 175 Query: 69 FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128 N + + ++Q D + +G + S F V VTG+T GKGF+G +KRH Sbjct: 176 LIK-NCNNFAYMKPVKLQPPQDYV-LGQILDVSAFAGCTHVKVTGITKGKGFAGVIKRHG 233 Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188 F +HG S HR GS G PG V K+M GRMG R T + L V+ ++ + L Sbjct: 234 FARGPMSHG-SKHHRKPGSIGASTTPGCVKPGKRMPGRMGNKRCTFRKLRVLGINPETSL 292 Query: 189 ILVKGCVPGAKKNSWILVRD 208 + VK V GA S++ V Sbjct: 293 MYVKALVAGAN-GSYVSVTS 311 >gi|319955856|ref|YP_004167119.1| LSU ribosomal protein l3p [Nitratifractor salsuginis DSM 16511] gi|319418260|gb|ADV45370.1| LSU ribosomal protein L3P [Nitratifractor salsuginis DSM 16511] Length = 193 Score = 161 bits (407), Expect = 9e-38, Method: Composition-based stats. Identities = 64/202 (31%), Positives = 102/202 (50%), Gaps = 15/202 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ ++ +PVT+L + +V R ++G V +G+ ++K + Sbjct: 4 IVEKIGMSRTIDVP--SVPVTLLKVVETKVCEVR---EDGKALVAYNSGKK----INKAI 54 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G +VS + +F + + G S + Q+V + + G+GFSG MK Sbjct: 55 EGQQKKYSVSNEFN--KFMTLEVAEGTEPGD-LSTAPLAEAQVVKSSFNSKGRGFSGVMK 111 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 RHNF G HG S HR+ GS G + PGRV +KM G G + TVKN EV+S D + Sbjct: 112 RHNFAGGPGAHG-SRFHRAPGSIGMCEWPGRVQPGQKMPGHYGNAKTTVKN-EVISFDAE 169 Query: 186 RGLILVKGCVPGAKK-NSWILV 206 G++++KG VPG K + + Sbjct: 170 NGILVLKGAVPGPKGARGVVRI 191 >gi|146332291|gb|ABQ22651.1| mitochondrial 39S ribosomal protein L3-like protein [Callithrix jacchus] Length = 173 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 54/128 (42%), Positives = 69/128 (53%), Gaps = 2/128 (1%) Query: 88 DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGS 147 D+ L G+ ++F GQ VDVT TIGKGF G MKR F G ATHG + +HR G+ Sbjct: 8 DNAALKPGTPLYAAHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTHRRPGA 67 Query: 148 TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVR 207 D RV+ K+ G+MG TV L+V ++ K +I V G VPG KN + VR Sbjct: 68 I-STGDVARVWPGTKLPGQMGNIDRTVHGLKVWRINTKHNIIYVNGSVPG-HKNCLVKVR 125 Query: 208 DSFKSAVN 215 DS A Sbjct: 126 DSKLPAYK 133 >gi|323348471|gb|EGA82716.1| Mrpl9p [Saccharomyces cerevisiae Lalvin QA23] Length = 164 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 62/128 (48%), Positives = 87/128 (67%), Gaps = 1/128 (0%) Query: 90 DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTG 149 L+P G++ PS+F GQ VDV ++ GKGF+G MKR+ F GLRA+HG SI HR GS G Sbjct: 12 GLIPPGTLLKPSFFKEGQYVDVRSVSKGKGFTGVMKRYGFKGLRASHGTSIMHRHGGSYG 71 Query: 150 CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 QDPGRV +KM G MG VT++N++V+ VDD+ +I VKG V G KNS++ ++D+ Sbjct: 72 QNQDPGRVLPGRKMPGHMGNEHVTIQNVKVLKVDDENNVIWVKGSVAGP-KNSFVKIQDA 130 Query: 210 FKSAVNCK 217 K ++ + Sbjct: 131 IKKNLSIR 138 >gi|255644742|gb|ACU22873.1| unknown [Glycine max] Length = 177 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 58/128 (45%), Positives = 85/128 (66%), Gaps = 1/128 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+G++A K GM+ +++ G RIP+TVL +D+ V +T +K G+ A+Q+G G K K++ Sbjct: 51 RTGLIAVKCGMSALWDKWGARIPITVLWVDDNIVSQIKTPEKEGFCALQIGCGHKKDKHL 110 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +KP G F + V K+KL EF V +D LLPVG+ + +F GQ VD++G+T GKGF Sbjct: 111 TKPEVGHFRAQGVPMKRKLREFPVTED-ALLPVGTSLNVRHFVPGQFVDISGITKGKGFQ 169 Query: 122 GAMKRHNF 129 G MKRH F Sbjct: 170 GVMKRHGF 177 >gi|154148794|ref|YP_001405697.1| 50S ribosomal protein L3 [Campylobacter hominis ATCC BAA-381] gi|153804803|gb|ABS51810.1| ribosomal protein L3 [Campylobacter hominis ATCC BAA-381] Length = 191 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 16/195 (8%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ I+ IPVT+L + N ++ +G V G+A +K + Sbjct: 4 IVEKIGMSR--TIDNPSIPVTLLRVVNAKICEV----NDGKAVVAYANGKA----FNKAI 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G N+S + F + VG S F + V + + G+G+ G MK Sbjct: 54 AGIQKKYNLSKEFNKFA---TLCVENAEVGDQ-SIEIFNNAKFVKSSFTSKGRGYQGVMK 109 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 RH F G +HG S HR HGS G + PGRV +MAG MG +VTVKN E+V D + Sbjct: 110 RHGFAGGPKSHG-SRFHRRHGSIGNCEWPGRVQPGMRMAGHMGNVKVTVKN-EIVKFDAE 167 Query: 186 RGLILVKGCVPGAKK 200 ++++KG V G Sbjct: 168 NRILVLKGAVAGFNG 182 >gi|291533621|emb|CBL06734.1| 50S ribosomal protein L3, bacterial [Megamonas hypermegale ART12/1] Length = 149 Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats. Identities = 72/150 (48%), Positives = 90/150 (60%), Gaps = 5/150 (3%) Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M+G F+ V P K + E R+ D G S F G LVDVTG + GKGF+G + Sbjct: 1 MKGHFAKAGVEPVKFIRELRL-ADVPEYKAGDSISVDIFGAGDLVDVTGTSKGKGFAGGI 59 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 KRHNF HG S SHR GSTG GRV K KK+ GRMGG +VTV+ L VV V Sbjct: 60 KRHNFARGPMGHG-SKSHREPGSTGAMISGHGGRVLKGKKLPGRMGGAKVTVQRLSVVRV 118 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D R LIL+KG +PGA KNS+++++D+ K Sbjct: 119 DADRNLILIKGAIPGA-KNSFVVIKDTVKP 147 >gi|85000981|ref|XP_955209.1| 50S ribosomal protein L3 [Theileria annulata strain Ankara] gi|65303355|emb|CAI75733.1| 50S ribosomal protein L3, putative [Theileria annulata] Length = 328 Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats. Identities = 63/234 (26%), Positives = 97/234 (41%), Gaps = 31/234 (13%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV--- 61 + A K G+ + + +G VT L + C ++ GY V G ++ Sbjct: 99 LRAIKHGVGQITSPDGIVETVTALRVLPCTILQFMDF---GYALVSYGTFNKYATSLLKF 155 Query: 62 -------------------SKPMRGFFSSVNVSPKKKLFEFRVQ-KDDDLLPVGSVFSPS 101 ++P G ++ + F V+ + +G + S Sbjct: 156 IKQIFNENIGKPLWTRHWNNRPELGKLIKISAN---NAETFPVKLQPPQDYVLGQLVDVS 212 Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F VTG+T GKGF G +KRH F +HG S HR GS G PG V K Sbjct: 213 SFVGCTHAKVTGITKGKGFQGVIKRHGFKRGPMSHG-SKHHRRPGSIGASTTPGCVKPGK 271 Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 KM GRMGG R T + L+++ ++ + L+ VKG V G K S++ V + + Sbjct: 272 KMPGRMGGKRCTFRKLKILGLNPETSLLYVKGHVAGP-KGSYVTVTSDVQPPLK 324 >gi|3914749|sp|P94799|RL3_ACTAC RecName: Full=50S ribosomal protein L3 gi|1841322|dbj|BAA10947.1| ribosomal protein L3 [Actinobacillus actinomycetemcomitans] Length = 121 Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 79/122 (64%), Gaps = 1/122 (0%) Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150 +G + F + VDVTG + GKGF G +KR NF ATHG S+SHR GS G Sbjct: 1 EFTLGQEINVDIFADVKKVDVTGTSKGKGFQGGVKRWNFRTQDATHGNSLSHRVLGSIGQ 60 Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 Q PGRVFK KKMAG +G RVTV++LEVV VD +R L+LVKG VPGA S ++V+ + Sbjct: 61 NQTPGRVFKGKKMAGHLGNERVTVQSLEVVRVDAERKLLLVKGAVPGA-TGSDVIVKPAV 119 Query: 211 KS 212 K+ Sbjct: 120 KA 121 >gi|268680587|ref|YP_003305018.1| 50S ribosomal protein L3 [Sulfurospirillum deleyianum DSM 6946] gi|268618618|gb|ACZ12983.1| 50S ribosomal protein L3 [Sulfurospirillum deleyianum DSM 6946] Length = 192 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 69/195 (35%), Positives = 101/195 (51%), Gaps = 15/195 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ + +PVT+L + +V ++D+N V +G+ ++K + Sbjct: 4 IIEKIGMSRTIAVP--SVPVTLLRVLEAKVC---SVDENKRALVSYVSGKK----MNKAI 54 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G N+S F V D VG S + + Q + V+ T G+GF+G +K Sbjct: 55 AGQQKKYNLSAAFNRF---VTLDVTNTEVGD-LSTAPLSEAQRLKVSLNTKGRGFTGVIK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 RHNF G HG S HR+ GS G + PGRV K KKM G G +VTV+N E+VS D + Sbjct: 111 RHNFHGGPGGHG-SRFHRAPGSIGNCEWPGRVQKGKKMPGHYGNTQVTVQN-EIVSFDAE 168 Query: 186 RGLILVKGCVPGAKK 200 G++ VKG VPGA Sbjct: 169 NGILAVKGSVPGANG 183 >gi|149928568|ref|ZP_01916792.1| ribosomal protein L3 [Limnobacter sp. MED105] gi|149822709|gb|EDM81972.1| ribosomal protein L3 [Limnobacter sp. MED105] Length = 126 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 67/125 (53%), Positives = 86/125 (68%), Gaps = 1/125 (0%) Query: 90 DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTG 149 L VG+ S F GQ VDV+G+T GKGFSGA+KRH+F RA+HG SISH + GS G Sbjct: 3 AELQVGAAVSAEIFAPGQKVDVSGVTQGKGFSGAIKRHHFSSQRASHGNSISHNAPGSIG 62 Query: 150 CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 QDPGRVF K+MAG++G T +NLEVV VD +RGL+L+KG VPG+ K +LV+ + Sbjct: 63 MAQDPGRVFPGKRMAGQLGNVNRTTQNLEVVRVDAERGLLLIKGAVPGS-KGGQLLVKPA 121 Query: 210 FKSAV 214 K+ Sbjct: 122 VKAKA 126 >gi|293372118|ref|ZP_06618509.1| 50S ribosomal protein L3 [Bacteroides ovatus SD CMC 3f] gi|292632910|gb|EFF51497.1| 50S ribosomal protein L3 [Bacteroides ovatus SD CMC 3f] Length = 142 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 61/143 (42%), Positives = 83/143 (58%), Gaps = 4/143 (2%) Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124 M G F V+PK+ L EF+ + + L +G + F VDV G + GKGF G + Sbjct: 1 MMGHFKRAGVTPKRHLAEFK--EFETELNLGDTITVEMFNDASFVDVVGTSKGKGFQGVV 58 Query: 125 KRHNFGG-LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 KRH FGG +ATHG R GS G P +VFK +M G++GG+RVTV+NL+V+ V Sbjct: 59 KRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKVI 118 Query: 184 DKRGLILVKGCVPGAKKNSWILV 206 L+LVKG +PG K S +L+ Sbjct: 119 ADHNLLLVKGSIPGC-KGSIVLI 140 >gi|255017007|ref|ZP_05289133.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL F2-515] Length = 122 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 1/123 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY AVQ+G + + Sbjct: 1 MTKGILGRKVGMTQVFTENGELIPVTVIEAAQNVVLQKKTVETDGYEAVQIGFEDKRAIL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 +KP +G + N +PK+ + EFR + D +G+ F G ++D TG++ GKGF Sbjct: 61 SNKPEQGHVAKANTTPKRFIREFR-DVNLDEYEIGAEVKVDVFAEGDIIDATGVSKGKGF 119 Query: 121 SGA 123 G Sbjct: 120 QGV 122 >gi|152989972|ref|YP_001355694.1| 50S ribosomal protein L3 [Nitratiruptor sp. SB155-2] gi|151421833|dbj|BAF69337.1| 50S ribosomal protein L3 [Nitratiruptor sp. SB155-2] Length = 192 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 15/195 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ ++ +PVT+L + +V L + G V G+ + +K + Sbjct: 4 IVEKIGMSRTISVP--SVPVTLLKVKEAKVCE---LLEGGKAIVAYSQGKKR----NKAI 54 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G +SP+ F ++ G + + + + + + G+GFSG +K Sbjct: 55 EGQQKKYGLSPEFNRF---IKLKVTNTEAGD-LDVTPLSEAKRIKTSFNSKGRGFSGVVK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NFGG +HG S HR+ GS G + PGR+ +KM G+ G +VTV+N EVVS D + Sbjct: 111 RWNFGGGPDSHG-SRFHRAPGSVGMCEWPGRIMPGQKMPGQYGNKKVTVQN-EVVSFDPE 168 Query: 186 RGLILVKGCVPGAKK 200 +++VKG +PG Sbjct: 169 NMILVVKGSIPGPNG 183 >gi|227871802|ref|ZP_03990206.1| possible ribosomal protein L3 [Oribacterium sinus F0268] gi|227842365|gb|EEJ52591.1| possible ribosomal protein L3 [Oribacterium sinus F0268] Length = 128 Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 50/126 (39%), Positives = 69/126 (54%), Gaps = 2/126 (1%) Query: 87 KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146 ++ + V F G VDV+ + GKGF+ A+K++ THG S HR G Sbjct: 5 ENAEEYKVKDEIKADIFAEGDKVDVSATSKGKGFASAIKKYGQHRGPMTHG-SKFHRHQG 63 Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206 S G P RV K M MG +VT +NL VV VD ++GLILVKG VPG KK + + + Sbjct: 64 SNGTSATPSRVLPGKGMPSHMGAVKVTTQNLTVVKVDAEQGLILVKGAVPGPKK-ALVTI 122 Query: 207 RDSFKS 212 +++ KS Sbjct: 123 KEAVKS 128 >gi|269866677|ref|XP_002652354.1| LSU ribosomal protein L3P [Enterocytozoon bieneusi H348] gi|220062674|gb|EED41701.1| LSU ribosomal protein L3P [Enterocytozoon bieneusi H348] Length = 116 Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 60/115 (52%), Positives = 81/115 (70%), Gaps = 1/115 (0%) Query: 98 FSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRV 157 F GQ VDV+G++ GKGF+GA+KRHNF RA+HG S+SHR+ GS GCRQ PGRV Sbjct: 3 IDLDIFAEGQRVDVSGVSKGKGFAGAIKRHNFRSNRASHGNSLSHRAPGSIGCRQTPGRV 62 Query: 158 FKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 FK KKMAG +G +VT NLE+V +D R L+++KG VPGA+ +++R + + Sbjct: 63 FKGKKMAGHLGAEQVTTLNLELVRIDANRRLLMIKGAVPGARDGD-VMIRPAVRG 116 >gi|291277268|ref|YP_003517040.1| 50S ribosomal protein L3 [Helicobacter mustelae 12198] gi|290964462|emb|CBG40312.1| 50S ribosomal protein L3 [Helicobacter mustelae 12198] Length = 192 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 69/192 (35%), Positives = 93/192 (48%), Gaps = 15/192 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ I+ + I VT+L + + +V +N + G+A +K + Sbjct: 4 LVEKIGMSR--TIDTKSIAVTLLRVIDAKVCEIY---ENKKALIAYAKGKAS----NKAI 54 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G N+S K F VG S Q + VT T G+GFSGAMK Sbjct: 55 AGQQKKYNLS---KEFNRFATLQVGNAEVGD-LDKSALENAQRLKVTFKTKGRGFSGAMK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF G A HG S HR GS G R+ PGRV KKMAG G VT +N EVVS D + Sbjct: 111 RWNFQGGPAAHG-SRFHRRLGSIGNREWPGRVQPGKKMAGHYGNETVTAQN-EVVSFDKE 168 Query: 186 RGLILVKGCVPG 197 ++++KG V G Sbjct: 169 SNILVLKGSVAG 180 >gi|154340798|ref|XP_001566352.1| ribosomal protein L3-like protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134063675|emb|CAM39860.1| ribosomal protein L3-like protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 467 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 60/219 (27%), Positives = 92/219 (42%), Gaps = 8/219 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKVK 59 +R G+V K+ Y+ G + T + Q+V H T + + G V VGA V+ Sbjct: 129 VRFGMVGVKVFTCKDYDDLGNQFDCTAFWFPDNQIVKHSTRNGDVGTDKVYVGAMNVPVE 188 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + F+ + V K F V D PVG+ +F GQ V +T G Sbjct: 189 FHKPHVAAFYKAAGVPVKHVSAGFPVTPD-AYAPVGTKLDVRHFKPGQEVTITFQNTDYG 247 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 + G M RH F G G S R G G + R++ +MAG+ G + T + + V Sbjct: 248 YQGVMFRHGFDGGYVWLGDSKWQRRPGCMGA-EGQKRIYPGHRMAGQTGASAETYQGVPV 306 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +D K LI + + A +++ RD+ N KG Sbjct: 307 WRIDYKNSLIYLPTLI-DADVGTYVKFRDTI----NTKG 340 >gi|261838638|gb|ACX98404.1| ribosomal protein L3 [Helicobacter pylori 51] Length = 191 Score = 147 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 90/192 (46%), Gaps = 15/192 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + +K+GM+ I+ PVT+L + +V +NG V + +K + Sbjct: 4 LVQKIGMSR--TIDANSTPVTLLKVLQAKVCQL----ENGKALVAYAMHKK----YNKAI 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G +S + F K +G S + V + T G+GF+G MK Sbjct: 54 EGQQKKYQLSKEFNH--FATLKASQQQELGD-LDLSTLETLKRVKASFKTKGRGFAGVMK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N EV+S D + Sbjct: 111 RWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDKE 168 Query: 186 RGLILVKGCVPG 197 ++++KG V G Sbjct: 169 SMVLVLKGSVAG 180 >gi|308185071|ref|YP_003929204.1| 50S ribosomal protein L3 [Helicobacter pylori SJM180] gi|308060991|gb|ADO02887.1| 50S ribosomal protein L3 [Helicobacter pylori SJM180] Length = 191 Score = 147 bits (373), Expect = 7e-34, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 90/192 (46%), Gaps = 15/192 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + +K+GM+ I+ PVT+L + +V +NG V + +K + Sbjct: 4 LVQKIGMSR--TIDANSTPVTLLKVLQAKVCQL----ENGKALVAYAMHKK----YNKAI 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G +S + F K +G S + V + T G+GF+G MK Sbjct: 54 EGQQKKYQLSKEFNH--FATLKASQQQELGD-LDLSALETLKRVKASFKTKGRGFAGVMK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N EV+S D + Sbjct: 111 RWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDKE 168 Query: 186 RGLILVKGCVPG 197 ++++KG V G Sbjct: 169 SMVLVLKGSVAG 180 >gi|222823103|ref|YP_002574676.1| 50S ribosomal protein L3 [Campylobacter lari RM2100] gi|222538324|gb|ACM63425.1| 50S ribosomal protein L3 [Campylobacter lari RM2100] Length = 191 Score = 147 bits (373), Expect = 8e-34, Method: Composition-based stats. Identities = 69/195 (35%), Positives = 97/195 (49%), Gaps = 16/195 (8%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ I IPVT+L L +V +NG V G+A +K + Sbjct: 4 IVEKIGMSR--TISTPSIPVTLLKLVQTKVCEV----ENGKALVAYVKGKAN----NKCI 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G N+S + F + G + ++ V+ + G+G+SG +K Sbjct: 54 AGQQKKYNLSAEYNRFA---SLEVANTEAGD-IDLNPLKEASILKVSFNSKGRGYSGVVK 109 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 RH F G A+HG S HR HGS G R+ PGRV KMAG G +VTVKN EVVS D++ Sbjct: 110 RHGFAGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGHYGNVKVTVKN-EVVSFDEE 167 Query: 186 RGLILVKGCVPGAKK 200 G+++VKG VPG Sbjct: 168 NGILVVKGAVPGFNG 182 >gi|217033636|ref|ZP_03439064.1| hypothetical protein HP9810_899g72 [Helicobacter pylori 98-10] gi|216943982|gb|EEC23416.1| hypothetical protein HP9810_899g72 [Helicobacter pylori 98-10] gi|261840034|gb|ACX99799.1| 50S ribosomal protein L3 [Helicobacter pylori 52] gi|307637990|gb|ADN80440.1| LSU ribosomal protein L3p:L3e [Helicobacter pylori 908] gi|308062604|gb|ADO04492.1| 50S ribosomal protein L3 [Helicobacter pylori Cuz20] gi|315587208|gb|ADU41589.1| 50S ribosomal protein L3 [Helicobacter pylori 35A] gi|317013106|gb|ADU83714.1| 50S ribosomal protein L3 [Helicobacter pylori Lithuania75] gi|317178390|dbj|BAJ56178.1| 50S ribosomal protein L3 [Helicobacter pylori F30] gi|317181041|dbj|BAJ58827.1| 50S ribosomal protein L3 [Helicobacter pylori F32] gi|317182565|dbj|BAJ60349.1| 50S ribosomal protein L3 [Helicobacter pylori F57] gi|325996595|gb|ADZ52000.1| 50S ribosomal protein L3 [Helicobacter pylori 2018] gi|325998185|gb|ADZ50393.1| 50S ribosomal protein L3 [Helicobacter pylori 2017] Length = 191 Score = 147 bits (372), Expect = 8e-34, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 90/192 (46%), Gaps = 15/192 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + +K+GM+ I+ PVT+L + +V +NG V + +K + Sbjct: 4 LVQKIGMSR--TIDANSTPVTLLKVLQAKVCQL----ENGKALVAYAMHKKH----NKAI 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G +S + F K +G S + V + T G+GF+G MK Sbjct: 54 EGQQKKYQLSKEFNH--FATLKASQQQELGD-LDLSALETLKRVKASFKTKGRGFAGVMK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N EV+S D + Sbjct: 111 RWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDKE 168 Query: 186 RGLILVKGCVPG 197 ++++KG V G Sbjct: 169 SMVLVLKGSVAG 180 >gi|317014710|gb|ADU82146.1| 50S ribosomal protein L3 [Helicobacter pylori Gambia94/24] Length = 191 Score = 147 bits (372), Expect = 9e-34, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 90/192 (46%), Gaps = 15/192 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + +K+GM+ I+ PVT+L + +V +NG V + +K + Sbjct: 4 LVQKIGMSR--TIDANSTPVTLLKVLQAKVCQL----ENGKALVAYAMHKKH----NKAI 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G +S + F K +G S + V + T G+GF+G MK Sbjct: 54 EGQQKKYQLSKEFNH--FATLKASQQQELGD-LDLSALETLKRVKASFKTKGRGFAGVMK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N EV+S D + Sbjct: 111 RWNFQGGPAAHG-SRFHRHPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDKE 168 Query: 186 RGLILVKGCVPG 197 ++++KG V G Sbjct: 169 SMVLVLKGSVAG 180 >gi|109946759|ref|YP_663987.1| 50S ribosomal protein L3 [Helicobacter acinonychis str. Sheeba] gi|109713980|emb|CAJ98988.1| 50S ribosomal protein L3 [Helicobacter acinonychis str. Sheeba] gi|317011519|gb|ADU85266.1| 50S ribosomal protein L3 [Helicobacter pylori SouthAfrica7] Length = 191 Score = 147 bits (372), Expect = 9e-34, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 90/192 (46%), Gaps = 15/192 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + +K+GM+ I+ PVT+L + +V +NG V + +K + Sbjct: 4 LVQKIGMSR--TIDANSTPVTLLKVLQAKVCQL----ENGKALVAYAMHKKH----NKAI 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G +S + F K +G S + V + T G+GF+G MK Sbjct: 54 EGQQKKYQLSKEFNH--FATLKASQQKELGD-LDLSALETLKRVKASFKTKGRGFAGVMK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N EV+S D + Sbjct: 111 RWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDKE 168 Query: 186 RGLILVKGCVPG 197 ++++KG V G Sbjct: 169 SMVLVLKGSVAG 180 >gi|224417885|ref|ZP_03655891.1| 50S ribosomal protein L3 [Helicobacter canadensis MIT 98-5491] gi|253827224|ref|ZP_04870109.1| 50S ribosomal protein L3 [Helicobacter canadensis MIT 98-5491] gi|313141427|ref|ZP_07803620.1| 50S ribosomal protein L3 [Helicobacter canadensis MIT 98-5491] gi|253510630|gb|EES89289.1| 50S ribosomal protein L3 [Helicobacter canadensis MIT 98-5491] gi|313130458|gb|EFR48075.1| 50S ribosomal protein L3 [Helicobacter canadensis MIT 98-5491] Length = 192 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 15/195 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ IPVT+L + +V +G A+ V + K ++K + Sbjct: 4 LVEKIGMSRTVAKP--SIPVTLLKVKTAKVCEV----LDGGKAL-VAYHQGKT--LNKAI 54 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G N+ + F + VG + + V+ T G+GFSG MK Sbjct: 55 AGQQKKYNLDKEFNKFA---TIEVGNAEVGD-LDLAILESAKRAKVSFNTKGRGFSGVMK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF G HG S HR+ GS G R+ PGRV KKMAG G +VTV+N E++S D + Sbjct: 111 RWNFQGGPGAHG-SRFHRAPGSIGNREWPGRVQPGKKMAGHYGNEKVTVQN-EIISFDKE 168 Query: 186 RGLILVKGCVPGAKK 200 ++++KG VPG Sbjct: 169 NNVLVLKGSVPGFNG 183 >gi|297380500|gb|ADI35387.1| 50S ribosomal protein L3 [Helicobacter pylori v225d] Length = 191 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 89/192 (46%), Gaps = 15/192 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + +K+GM+ I+ PVT+L + +V +NG V + +K + Sbjct: 4 LVQKIGMSR--TIDANSTPVTLLKVLQAKVCQL----ENGKALVAYAMHKKH----NKAI 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G +S + F K +G S + V + T G+GF+G MK Sbjct: 54 EGQQKKYQLSKEFNH--FATLKASQQQELGD-LDLSALETLKKVKASFKTKGRGFAGVMK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N EV+S D + Sbjct: 111 RWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDKE 168 Query: 186 RGLILVKGCVPG 197 ++ +KG V G Sbjct: 169 SMVLALKGSVAG 180 >gi|237753023|ref|ZP_04583503.1| 50s ribosomal protein l3 [Helicobacter winghamensis ATCC BAA-430] gi|229375290|gb|EEO25381.1| 50s ribosomal protein l3 [Helicobacter winghamensis ATCC BAA-430] Length = 192 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 66/195 (33%), Positives = 94/195 (48%), Gaps = 15/195 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ IPVT+L + +V + G V G++ +K + Sbjct: 4 LVEKIGMSRTIGKP--SIPVTLLKVKTAKVCEVL---EGGKALVAYHQGKS----TNKSI 54 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G N+ + F + + VG S + V+ T G+GFSG MK Sbjct: 55 AGQQKKYNLDKEYNRFA---TLEVNNTEVGD-LDFSSLENAKRAKVSFNTKGRGFSGVMK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF G A HG S HR+ GS G R+ PGRV KKMAG G +VTV+N E+VS D + Sbjct: 111 RWNFQGGPAAHG-SRFHRAPGSIGNREWPGRVQPGKKMAGHYGNEKVTVQN-EIVSFDKE 168 Query: 186 RGLILVKGCVPGAKK 200 G++++KG VPG Sbjct: 169 HGVLVLKGSVPGFNG 183 >gi|15612304|ref|NP_223957.1| 50S ribosomal protein L3 [Helicobacter pylori J99] gi|7674309|sp|Q9ZJR4|RL3_HELPJ RecName: Full=50S ribosomal protein L3 gi|4155816|gb|AAD06790.1| 50S RIBOSOMAL PROTEIN L3 [Helicobacter pylori J99] Length = 191 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 90/192 (46%), Gaps = 15/192 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + +K+GM+ I+ PVT+L + +V +NG V + +K + Sbjct: 4 LVQKIGMSR--TIDANSTPVTLLKVLQAKVCQL----ENGKALVAYAMHKK----YNKAI 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G +S + F K +G S + V + T G+GF+G MK Sbjct: 54 EGQQKKYQLSKEFNH--FATLKASQQKELGD-LDLSALETLKRVKASFKTKGRGFAGVMK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N EV+S D + Sbjct: 111 RWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDKE 168 Query: 186 RGLILVKGCVPG 197 ++++KG V G Sbjct: 169 SMVLVLKGSVAG 180 >gi|254779861|ref|YP_003057967.1| 50S ribosomal protein L3 [Helicobacter pylori B38] gi|254001773|emb|CAX30004.1| 50S ribosomal subunit protein L3 [Helicobacter pylori B38] Length = 191 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 90/192 (46%), Gaps = 15/192 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + +K+GM+ I+ PVT+L + +V +NG V + +K + Sbjct: 4 LVQKIGMSR--TIDANSTPVTLLKVLQAKVCQL----ENGKALVAYAMHKKH----NKAI 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G +S + F K +G S + V + T G+GF+G MK Sbjct: 54 EGQQKKYQLSKEFNH--FATLKASQQKELGD-LDLSTLETLKRVKASFKTKGRGFAGVMK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N EV+S D + Sbjct: 111 RWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDKE 168 Query: 186 RGLILVKGCVPG 197 ++++KG V G Sbjct: 169 SMVLVLKGSVAG 180 >gi|308064096|gb|ADO05983.1| 50S ribosomal protein L3 [Helicobacter pylori Sat464] Length = 191 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 89/192 (46%), Gaps = 15/192 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + +K+GM+ I+ PVT+L + +V +NG V + +K + Sbjct: 4 LVQKIGMSR--TIDANSTPVTLLKVLQAKVCQL----ENGKALVAYAMHKKH----NKAI 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G +S + F K +G S + V + T G+GF+G MK Sbjct: 54 EGQQKKYQLSKEFNH--FATLKASQQQELGD-LDLSALETLKRVKASFKTKGRGFAGVMK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N EV+S D + Sbjct: 111 RWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDKE 168 Query: 186 RGLILVKGCVPG 197 ++ +KG V G Sbjct: 169 SMVLALKGSVAG 180 >gi|15645932|ref|NP_208111.1| 50S ribosomal protein L3 [Helicobacter pylori 26695] gi|108563689|ref|YP_628005.1| 50S ribosomal protein L3 [Helicobacter pylori HPAG1] gi|208435216|ref|YP_002266882.1| ribosomal protein L3 [Helicobacter pylori G27] gi|210135476|ref|YP_002301915.1| 50S ribosomal protein L3 [Helicobacter pylori P12] gi|217032072|ref|ZP_03437572.1| hypothetical protein HPB128_16g32 [Helicobacter pylori B128] gi|298735656|ref|YP_003728181.1| 50S ribosomal protein L3 [Helicobacter pylori B8] gi|2500226|sp|P56031|RL3_HELPY RecName: Full=50S ribosomal protein L3 gi|2314481|gb|AAD08358.1| ribosomal protein L3 (rpl3) [Helicobacter pylori 26695] gi|107837462|gb|ABF85331.1| ribosomal protein L3 [Helicobacter pylori HPAG1] gi|208433145|gb|ACI28016.1| ribosomal protein L3 [Helicobacter pylori G27] gi|210133444|gb|ACJ08435.1| 50S ribosomal protein L3 [Helicobacter pylori P12] gi|216946220|gb|EEC24828.1| hypothetical protein HPB128_16g32 [Helicobacter pylori B128] gi|298354845|emb|CBI65717.1| large subunit ribosomal protein L3 [Helicobacter pylori B8] gi|317010002|gb|ADU80582.1| 50S ribosomal protein L3 [Helicobacter pylori India7] gi|317178058|dbj|BAJ55847.1| 50S ribosomal protein L3 [Helicobacter pylori F16] Length = 191 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 90/192 (46%), Gaps = 15/192 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + +K+GM+ I+ PVT+L + +V +NG V + +K + Sbjct: 4 LVQKIGMSR--TIDANSTPVTLLKVLQAKVCQL----ENGKALVAYAMHKKH----NKAI 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G +S + F K +G S + V + T G+GF+G MK Sbjct: 54 EGQQKKYQLSKEFNH--FATLKASQQKELGD-LDLSALETLKRVKASFKTKGRGFAGVMK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N EV+S D + Sbjct: 111 RWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDKE 168 Query: 186 RGLILVKGCVPG 197 ++++KG V G Sbjct: 169 SMVLVLKGSVAG 180 >gi|242309319|ref|ZP_04808474.1| 50s ribosomal protein L3 [Helicobacter pullorum MIT 98-5489] gi|239523890|gb|EEQ63756.1| 50s ribosomal protein L3 [Helicobacter pullorum MIT 98-5489] Length = 192 Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 94/195 (48%), Gaps = 15/195 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ IPVT+L + N +V + G V G++ ++K + Sbjct: 4 LVEKIGMSRTVAKP--SIPVTLLKVKNAKVCEVL---EGGKALVAYHQGKS----INKSI 54 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G N+ + F + + G S + V+ T G+GFSG MK Sbjct: 55 AGQQKKYNLDKEYNKFA---TLEVNNTEAGD-LDLSVLENAKRAKVSFNTKGRGFSGVMK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF G HG S HR+ GS G R+ PGRV KKMAG G +VTV+N E++S D + Sbjct: 111 RWNFQGGPGAHG-SRFHRAPGSIGNREWPGRVQPGKKMAGHYGNEKVTVQN-EIISFDKE 168 Query: 186 RGLILVKGCVPGAKK 200 G++++KG VPG Sbjct: 169 HGVLVLKGSVPGFNG 183 >gi|118474609|ref|YP_891244.1| 50S ribosomal protein L3 [Campylobacter fetus subsp. fetus 82-40] gi|118413835|gb|ABK82255.1| ribosomal protein L3 [Campylobacter fetus subsp. fetus 82-40] Length = 192 Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 62/195 (31%), Positives = 90/195 (46%), Gaps = 15/195 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ + PVT+L L +V L + G V +A +K + Sbjct: 4 IVEKIGMSR--TVSAPSTPVTLLRLVPAKVCE---LGEGGKAIVAYAHTKAD----NKAI 54 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 +G +S + F G + +++ V+ T G+GF G +K Sbjct: 55 KGQQKKYGLSSEFNSFA---TLSVANSEAGD-LDVNPLNEAKVLKVSFNTKGRGFQGVIK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 RH F G A+HG S HR GS G + PGRV +KMAG G + TVKN EVVS D Sbjct: 111 RHGFSGGPASHG-SRFHRRPGSIGNCEWPGRVQPGRKMAGHYGNEKTTVKN-EVVSFDSA 168 Query: 186 RGLILVKGCVPGAKK 200 G++++KG VPG Sbjct: 169 NGILVLKGSVPGFNG 183 >gi|257458708|ref|ZP_05623832.1| 50S ribosomal protein L3 [Campylobacter gracilis RM3268] gi|257443897|gb|EEV19016.1| 50S ribosomal protein L3 [Campylobacter gracilis RM3268] Length = 192 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 59/195 (30%), Positives = 92/195 (47%), Gaps = 15/195 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ I+ PVT+L L N ++ + A+ V + K +K + Sbjct: 4 IVEKIGMSR--TIDTSSTPVTLLRLINTKICEV----CDEKKAI-VAYADGKAY--NKAI 54 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G ++S + F + +G + + ++V V+ + GKG+ G +K Sbjct: 55 AGIQKKYSLSKEFNKFA---TLSLENAELGDQ-NLDVLSEAKIVKVSFRSKGKGYQGVIK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 RH F G A HG S HR GS G + PGRV +MAG G +T KN EVVS D + Sbjct: 111 RHGFAGGPAAHG-SRFHRRPGSIGNCEWPGRVQPGMRMAGHTGNETITAKN-EVVSFDAE 168 Query: 186 RGLILVKGCVPGAKK 200 ++++KG VPG Sbjct: 169 NKILVLKGSVPGFNG 183 >gi|207091947|ref|ZP_03239734.1| 50S ribosomal protein L3 [Helicobacter pylori HPKX_438_AG0C1] Length = 191 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 90/192 (46%), Gaps = 15/192 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + +K+GM+ I+ PVT+L + +V +NG V + +K + Sbjct: 4 LVQKIGMSR--TIDANSTPVTLLKVLQAKVCQL----ENGKALVAYAMHKKH----NKAI 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G +S + F K +G S + V + T G+GF+G MK Sbjct: 54 EGQQKKYQLSKEFNH--FATLKASQQKELGD-LDLSALETLKRVKASFKTKGRGFAGVMK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N EV+S D + Sbjct: 111 RWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDKE 168 Query: 186 RGLILVKGCVPG 197 ++++KG V G Sbjct: 169 SMVLVLKGSVAG 180 >gi|188528107|ref|YP_001910794.1| 50S ribosomal protein L3 [Helicobacter pylori Shi470] gi|308183429|ref|YP_003927556.1| 50S ribosomal protein L3 [Helicobacter pylori PeCan4] gi|188144347|gb|ACD48764.1| 50S ribosomal protein L3 [Helicobacter pylori Shi470] gi|308065614|gb|ADO07506.1| 50S ribosomal protein L3 [Helicobacter pylori PeCan4] Length = 191 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 89/192 (46%), Gaps = 15/192 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + +K+GM+ I+ PVT+L + +V +NG V + +K + Sbjct: 4 LVQKIGMSR--TIDANSTPVTLLKVLQAKVCQL----ENGKALVAYAMHKKH----NKAI 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G +S + F K +G S + V + T G+GF+G MK Sbjct: 54 EGQQKKYQLSKEFNH--FATLKASQQKELGD-LDLSALETLKRVKASFKTKGRGFAGVMK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N EV+S D + Sbjct: 111 RWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDKE 168 Query: 186 RGLILVKGCVPG 197 ++ +KG V G Sbjct: 169 SMVLALKGSVAG 180 >gi|154175439|ref|YP_001409153.1| 50S ribosomal protein L3 [Campylobacter curvus 525.92] gi|153793233|gb|EAT99616.2| ribosomal protein L3 [Campylobacter curvus 525.92] Length = 192 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 96/195 (49%), Gaps = 15/195 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ I + PVT+L L +V + + V K +K + Sbjct: 4 IVEKIGMSR--TISTQSTPVTLLKLVEAKVC-----EIDENKRAIVAYAHTKAN--NKTI 54 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G N++ + F + VG+ + + +++ V+ + G+G+ G +K Sbjct: 55 AGQQKKYNLTAEFNKFA---TLEVANSEVGN-LDFTPLSEAKILKVSFNSKGRGYQGVVK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 RH F G +HG S HR HGS G + PGRV KMAG MG +VTVKN E+VS D + Sbjct: 111 RHGFSGGPKSHG-SRFHRRHGSIGNCEWPGRVQPGMKMAGHMGNEKVTVKN-ELVSFDAE 168 Query: 186 RGLILVKGCVPGAKK 200 G+++VKGCVPG Sbjct: 169 NGIVVVKGCVPGHNG 183 >gi|322500651|emb|CBZ35728.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 467 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 59/219 (26%), Positives = 90/219 (41%), Gaps = 8/219 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKVK 59 +R G++ K Y+ G + T + Q+V H T + + G V VGA V+ Sbjct: 129 VRFGMIGVKAFTCKDYDELGNQFDCTAFWFPDNQIVKHSTRNGDVGTDKVYVGAMNVPVE 188 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + F+ + V K F V D PVG+ +F GQ V +T G Sbjct: 189 FHKPHVAAFYKAAGVPVKHVSAGFPVTPD-AYAPVGTKLDVRHFKPGQEVTITFQNTDYG 247 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 + G M RH F G G S R G G + R++ +MAG+ G + T + V Sbjct: 248 YQGVMFRHGFDGGYVWLGDSKWQRRPGCMGA-EGQKRIYPGHRMAGQTGASAETYDGVPV 306 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +D K LI + + A +++ RD+ N KG Sbjct: 307 WRIDYKNSLIYLPTLI-DADVGTYVKFRDTI----NTKG 340 >gi|322488784|emb|CBZ24031.1| ribosomal protein L3-like protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 467 Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 58/219 (26%), Positives = 90/219 (41%), Gaps = 8/219 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKVK 59 +R G++ K Y+ G + T + Q+V H T + + G V VGA V+ Sbjct: 129 VRFGLIGVKAFTCKDYDDLGNQFDCTAFWFPDNQIVKHSTRNGDVGTDKVYVGAMNVPVE 188 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + F+ + V K F + D PVG+ +F GQ V +T G Sbjct: 189 FHKPHVAAFYKAAGVPVKHVSAGFPITPD-AYAPVGTKLDVRHFKPGQEVTITFQNTDYG 247 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 + G M RH F G G S R G G + R++ +MAG+ G + T + V Sbjct: 248 YQGVMFRHGFDGGYVWLGDSKWQRRPGCMGA-EGQKRIYPGHRMAGQTGASAETYDGVPV 306 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +D K LI + + A +++ RD+ N KG Sbjct: 307 WRIDYKNSLIYLPTLI-DADVGTYVKFRDTI----NTKG 340 >gi|73536476|ref|XP_847662.1| ribosomal protein L3-like protein [Leishmania major strain Friedlin] gi|321438575|emb|CBZ12334.1| ribosomal protein L3-like protein [Leishmania major strain Friedlin] Length = 467 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 59/219 (26%), Positives = 90/219 (41%), Gaps = 8/219 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKVK 59 +R G++ K Y+ G + T + Q+V H T + + G V VGA V+ Sbjct: 129 VRFGMIGVKAFTCKDYDDLGNQFDCTAFWFPDNQIVKHSTRNGDVGTDKVYVGAMNVPVE 188 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + F+ + V K F V D PVG+ +F GQ V +T G Sbjct: 189 FHKPHVAAFYKAAGVPVKHVSAGFPVTPD-AYAPVGTKLDVRHFKPGQEVTITFQNTDYG 247 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 + G M RH F G G S R G G + R++ +MAG+ G + T + V Sbjct: 248 YQGVMFRHGFDGGYVWLGDSKWQRRPGCMGA-EGQKRIYPGHRMAGQTGASAETYDGVPV 306 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +D K LI + + A +++ RD+ N KG Sbjct: 307 WRIDYKNSLIYLPTLI-DADVGTYVKFRDTI----NTKG 340 >gi|146092753|ref|XP_001466509.1| ribosomal protein L3-like protein [Leishmania infantum] gi|134070872|emb|CAM69548.1| ribosomal protein L3-like protein [Leishmania infantum JPCM5] Length = 467 Score = 144 bits (365), Expect = 7e-33, Method: Composition-based stats. Identities = 59/219 (26%), Positives = 90/219 (41%), Gaps = 8/219 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKVK 59 +R G++ K Y+ G + T + Q+V H T + + G V VGA V+ Sbjct: 129 VRFGMIGVKAFTCKDYDDLGNQFDCTAFWFPDNQIVKHSTRNGDVGTDKVYVGAMNVPVE 188 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + F+ + V K F V D PVG+ +F GQ V +T G Sbjct: 189 FHKPHVAAFYKAAGVPVKHVSAGFPVTPD-AYAPVGTKLDVRHFKPGQEVTITFQNTDYG 247 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 + G M RH F G G S R G G + R++ +MAG+ G + T + V Sbjct: 248 YQGVMFRHGFDGGYVWLGDSKWQRRPGCMGA-EGQKRIYPGHRMAGQTGASAETYDGVPV 306 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +D K LI + + A +++ RD+ N KG Sbjct: 307 WRIDYKNSLIYLPTLI-DADVGTYVKFRDTI----NTKG 340 >gi|322821701|gb|EFZ27955.1| mitochondrial ribosomal protein L3, putative [Trypanosoma cruzi] Length = 425 Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats. Identities = 59/219 (26%), Positives = 90/219 (41%), Gaps = 8/219 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKVK 59 +R G+V K Y+ G + T + Q+V H T + + G V VGA V+ Sbjct: 88 VRFGMVGVKAFTCKDYDELGNQFDCTAFWFPDNQIVRHSTRNGDVGTDRVYVGAMNVPVE 147 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + F+ + V K F + D PVG+ +F GQ V +T G Sbjct: 148 FHKPHVAAFYKAAGVPVKHVCAGFPITPD-AYAPVGTKLDVRHFKPGQEVTITFQNTDYG 206 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G M RH F G G S R G G + R++ +MAG+ G + T + + V Sbjct: 207 FRGVMFRHGFDGGYVWLGDSKWQRRPGCMGT-EGQKRIYPGHRMAGQTGASAETYQGVPV 265 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +D K LI + + A +++ D+ N KG Sbjct: 266 WRIDYKNALIYLPTLI-DADVGTYVKFSDTI----NTKG 299 >gi|71411062|ref|XP_807797.1| mitochondrial ribosomal protein L3 [Trypanosoma cruzi strain CL Brener] gi|70871872|gb|EAN85946.1| mitochondrial ribosomal protein L3, putative [Trypanosoma cruzi] Length = 473 Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats. Identities = 59/219 (26%), Positives = 90/219 (41%), Gaps = 8/219 (3%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKVK 59 +R G+V K Y+ G + T + Q+V H T + + G V VGA V+ Sbjct: 136 VRFGMVGVKAFTCKDYDELGNQFDCTAFWFPDNQIVRHSTRNGDVGTDRVYVGAMNVPVE 195 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + F+ + V K F + D PVG+ +F GQ V +T G Sbjct: 196 FHKPHVAAFYKAAGVPVKHVCAGFPITPD-AYAPVGTKLDVRHFKPGQEVTITFQNTDYG 254 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G M RH F G G S R G G + R++ +MAG+ G + T + + V Sbjct: 255 FRGVMFRHGFDGGYVWLGDSKWQRRPGCMGT-EGQKRIYPGHRMAGQTGASAETYQGVPV 313 Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +D K LI + + A +++ D+ N KG Sbjct: 314 WRIDYKNALIYLPTLI-DADVGTYVKFSDTI----NTKG 347 >gi|255321773|ref|ZP_05362928.1| 50S ribosomal protein L3 [Campylobacter showae RM3277] gi|255301253|gb|EET80515.1| 50S ribosomal protein L3 [Campylobacter showae RM3277] Length = 192 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 62/195 (31%), Positives = 95/195 (48%), Gaps = 15/195 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ + IPVT+L + N +V + G V G+AK +K + Sbjct: 4 IVEKIGMSR--TVNNPSIPVTLLKVVNAKVCEV---SECGCAIVAYAKGKAK----NKAI 54 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G +++ + F G S + +++ V+ + GKG+ G +K Sbjct: 55 EGQQKKYSLTAEFNKFA---TLQVANKEAGD-LDISPLSSAKILKVSFSSKGKGYQGVVK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 RH F G +HG S H+ HGS G R+ PGRV KMAG G +VTVKN E+VS D + Sbjct: 111 RHGFAGGPKSHG-SRFHKRHGSIGNREWPGRVQPGMKMAGHTGNEKVTVKN-EIVSFDAE 168 Query: 186 RGLILVKGCVPGAKK 200 G++++KG V G Sbjct: 169 NGILVLKGSVAGYNG 183 >gi|115749008|ref|XP_001195229.1| PREDICTED: similar to mitochondrial ribosomal protein L3 [Strongylocentrotus purpuratus] gi|115922520|ref|XP_001179143.1| PREDICTED: similar to mitochondrial ribosomal protein L3 [Strongylocentrotus purpuratus] Length = 343 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 60/211 (28%), Positives = 90/211 (42%), Gaps = 31/211 (14%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYM---AVQVGAGEAKV 58 R+GV+A KLGM ++ EG+R+P T+L + C V+ NG V V A A Sbjct: 114 RAGVIAIKLGMQPLWTKEGKRVPTTLLQVLECNVIDFHPQGLNGSDRPGTVLVAAKNAPP 173 Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118 + F SV + K+ + F V + L P G+ ++F G VD+ TI K Sbjct: 174 YYKDEEYADLFKSVCLPVKEHITSFNVTDNAALQP-GTPLYAAHFRPGMYVDIAAKTIDK 232 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G MKR G A+HG + +HR Sbjct: 233 GFQGVMKRWGMKGQPASHGATKTHR--------------------------KMGGSGGGG 266 Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 V+ V+ K ++ VKG + G + ++ V+DS Sbjct: 267 VLRVNTKHNILYVKGTIHG-RNLGFVKVKDS 296 >gi|21702611|gb|AAM76007.1|AF481103_17 ribosomal protein L3 [Candidatus Tremblaya princeps] Length = 205 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 98/204 (48%), Gaps = 8/204 (3%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64 ++ K+GMT + + G +PVT+L + + + + + V K +S+P Sbjct: 6 MLGVKVGMTRISSASGGVVPVTILDVSGNTPLRNACRSSDERV---VLYRSVHSKRLSRP 62 Query: 65 MRGFFSSVNVSPKKK--LFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 N+ P +L G + + GQLV + ++GKGFSG Sbjct: 63 QLCACIGRNMEPAAYSAWTAQHGMAQHGILACGRPHAKAILRAGQLVSIKARSVGKGFSG 122 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRH F RA+HG S +HR+ GSTG QDPGRVF K+M GRMG T +NL V V Sbjct: 123 VMKRHGFSSGRASHGTSKAHRTLGSTGMSQDPGRVFPGKRMPGRMGCEHATARNLMVEHV 182 Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206 ++V+G +PG S + + Sbjct: 183 --AHDFVMVRGGIPG-HAGSIVAI 203 >gi|72387453|ref|XP_844151.1| ribosomal protein L3 mitochondrial [Trypanosoma brucei TREU927] gi|62360659|gb|AAX81070.1| ribosomal protein L3 mitochondrial, putative [Trypanosoma brucei] gi|70800683|gb|AAZ10592.1| ribosomal protein L3 mitochondrial, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] gi|261327312|emb|CBH10288.1| ribosomal protein L3 mitochondrial, putative [Trypanosoma brucei gambiense DAL972] Length = 473 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 61/222 (27%), Positives = 89/222 (40%), Gaps = 14/222 (6%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKVK 59 +R G+V K Y+ G + T + QVV H T + G V VGA V+ Sbjct: 136 VRFGMVGVKAFTCKDYDELGNQFDCTAFWFPDNQVVKHSTRNGEVGTDKVYVGAMNVPVE 195 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 + F+ + V K F + D PVG+ +F GQ V +T G Sbjct: 196 FHKPHVAAFYKAAGVPVKHVCAGFPITPD-AYAPVGTKLDVRHFKPGQEVTITFQNTDYG 254 Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179 F G M RH F G G S R G+ G + R++ +MAG+ G T + + V Sbjct: 255 FRGVMFRHGFDGGYVWLGDSRWQRRPGAMGT-EGQKRIYPGHRMAGQTGAAAETYQGVPV 313 Query: 180 VSVDDKRGLILVKGCVP---GAKKNSWILVRDSFKSAVNCKG 218 +D K LI + P A +++ D+ N KG Sbjct: 314 WRIDYKNSLIYL----PTLLDADVGTYVRFSDTI----NTKG 347 >gi|57238730|ref|YP_179845.1| 50S ribosomal protein L3 [Campylobacter jejuni RM1221] gi|121613090|ref|YP_001001351.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 81-176] gi|148926798|ref|ZP_01810477.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni CG8486] gi|153952159|ref|YP_001398986.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. doylei 269.97] gi|157415929|ref|YP_001483185.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 81116] gi|167006240|ref|ZP_02271998.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 81-176] gi|205355721|ref|ZP_03222491.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni CG8421] gi|283956163|ref|ZP_06373648.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 1336] gi|305432598|ref|ZP_07401759.1| 50S ribosomal protein L3 [Campylobacter coli JV20] gi|315125092|ref|YP_004067096.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|57167534|gb|AAW36313.1| ribosomal protein L3 [Campylobacter jejuni RM1221] gi|121504221|gb|EAQ71912.2| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 81-176] gi|145844523|gb|EDK21630.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni CG8486] gi|152939605|gb|ABS44346.1| ribosomal protein L3 [Campylobacter jejuni subsp. doylei 269.97] gi|157386893|gb|ABV53208.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 81116] gi|205346498|gb|EDZ33131.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni CG8421] gi|283792317|gb|EFC31101.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 1336] gi|304444309|gb|EFM36961.1| 50S ribosomal protein L3 [Campylobacter coli JV20] gi|307748567|gb|ADN91837.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni M1] gi|315018814|gb|ADT66907.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315059153|gb|ADT73482.1| LSU ribosomal protein L3p [Campylobacter jejuni subsp. jejuni S3] gi|315931325|gb|EFV10294.1| ribosomal protein L3 family protein [Campylobacter jejuni subsp. jejuni 327] Length = 191 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 68/195 (34%), Positives = 95/195 (48%), Gaps = 16/195 (8%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ I VT+L + N +V + G V G+A +K + Sbjct: 4 IVEKIGMSRTITNP--SIAVTLLRVVNAKVCEV----EGGKALVAYPKGKAS----NKCV 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G N+S + F + G + +++ V+ T G+G+SG MK Sbjct: 54 AGQQKKYNLSAEYNRFA---TLEVANTEAGD-LDETPLNEAKILKVSFNTKGRGYSGVMK 109 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 RHNF G A+HG S HR HGS G R+ PGRV KMAG G +VTVKN EVVS D + Sbjct: 110 RHNFAGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGHYGNTKVTVKN-EVVSYDAE 167 Query: 186 RGLILVKGCVPGAKK 200 +++VKG VPG Sbjct: 168 NKILVVKGAVPGYNG 182 >gi|218563293|ref|YP_002345073.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|42559704|sp|Q9PLX1|RL3_CAMJE RecName: Full=50S ribosomal protein L3 gi|112361000|emb|CAL35801.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926898|gb|ADC29250.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni IA3902] gi|315926634|gb|EFV06014.1| ribosomal protein L3 family protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930642|gb|EFV09664.1| ribosomal protein L3 family protein [Campylobacter jejuni subsp. jejuni 305] Length = 191 Score = 142 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 67/195 (34%), Positives = 95/195 (48%), Gaps = 16/195 (8%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ I VT+L + N +V + G V G+A +K + Sbjct: 4 IVEKIGMSRTITNP--SIAVTLLRVVNAKVCEV----EGGKALVAYPKGKAS----NKCV 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G N+S + F + G + +++ V+ T G+G+SG MK Sbjct: 54 AGQQKKYNLSAEYNRFA---TLEVANTEAGD-LDETPLNEAKILKVSFNTKGRGYSGVMK 109 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 RHNF G A+HG S HR HGS G R+ PGRV KMAG G +VT+KN EVVS D + Sbjct: 110 RHNFAGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGHYGNTKVTIKN-EVVSYDAE 167 Query: 186 RGLILVKGCVPGAKK 200 +++VKG VPG Sbjct: 168 NKILVVKGAVPGYNG 182 >gi|315453735|ref|YP_004074005.1| 50S ribosomal protein L3 [Helicobacter felis ATCC 49179] gi|315132787|emb|CBY83415.1| 50S ribosomal protein L3 [Helicobacter felis ATCC 49179] Length = 190 Score = 142 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 66/192 (34%), Positives = 93/192 (48%), Gaps = 16/192 (8%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + +K+GM+ V + + +PVT+L + +V + V V K +K + Sbjct: 4 LVQKIGMSRV--VGAQSVPVTLLKVLESKVCEIKDKQ------VLVAYPLHKTH--NKAI 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G N+S K F D + +G + + T T G+GFSGAMK Sbjct: 54 AGQQKKYNLS---KEFNHFATLDAQVTELGD-LPLEPLESAKHIKATFYTKGRGFSGAMK 109 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF G A HG S HR GS G R+ PGRV K KKMAG G +VT N EV+S D + Sbjct: 110 RWNFQGGPAAHG-SRFHRRLGSIGNREWPGRVQKGKKMAGHYGNEKVTCHN-EVLSFDKE 167 Query: 186 RGLILVKGCVPG 197 ++++KG V G Sbjct: 168 SKILVLKGSVVG 179 >gi|283953682|ref|ZP_06371213.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 414] gi|283794723|gb|EFC33461.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 414] Length = 191 Score = 142 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 69/195 (35%), Positives = 96/195 (49%), Gaps = 16/195 (8%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ I VT+L + N +V + G V G+A +K + Sbjct: 4 IVEKIGMSRTITNP--SIAVTLLRIVNVKVCEV----EGGKALVAYPKGKAS----NKCV 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G N+S + F + VG + +++ V+ T G+G+SG MK Sbjct: 54 AGQQKKYNLSAEYNRFA---TLEVVNTEVGD-LDETPLNEAKILKVSFNTKGRGYSGVMK 109 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 RHNF G A+HG S HR HGS G R+ PGRV KMAG G +VTVKN EVVS D + Sbjct: 110 RHNFSGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGHYGNTKVTVKN-EVVSYDAE 167 Query: 186 RGLILVKGCVPGAKK 200 +++VKG VPG Sbjct: 168 NKILVVKGAVPGYNG 182 >gi|157165062|ref|YP_001467720.1| 50S ribosomal protein L3 [Campylobacter concisus 13826] gi|157101500|gb|ABV23519.1| ribosomal protein L3 [Campylobacter concisus 13826] Length = 192 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 96/195 (49%), Gaps = 15/195 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ I + PVT+L L +V + + V K +K + Sbjct: 4 IVEKIGMSR--TIATKSTPVTLLKLVEAKVC-----EIDENKRAIVAYAHTKAN--NKAI 54 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G N++ + F + VG+ + +++ V+ + G+G+ G +K Sbjct: 55 AGQQKKYNLTAEFNKFA---TLEVANSEVGN-LDFTPLNEAKILKVSFNSKGRGYQGVVK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 RH FGG +HG S HR HGS G + PGRV KMAG MG +VTVKN E++S D + Sbjct: 111 RHGFGGGPKSHG-SRFHRRHGSIGNCEWPGRVQPGMKMAGHMGNEKVTVKN-ELISFDAQ 168 Query: 186 RGLILVKGCVPGAKK 200 G+++VKGCVPG Sbjct: 169 NGIVVVKGCVPGHNG 183 >gi|146319920|ref|YP_001199631.1| 50S ribosomal protein L3 [Streptococcus suis 98HAH33] gi|145690726|gb|ABP91231.1| 50S ribosomal protein L3 [Streptococcus suis 98HAH33] Length = 112 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 3/115 (2%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYAAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMT 115 +KP +G + N +PK+ + EF K+ + L VG + F G +VDVTG Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNIEGLEVGQEITVETFAAGDVVDVTGTV 112 >gi|223038516|ref|ZP_03608810.1| 50S ribosomal protein L3 [Campylobacter rectus RM3267] gi|222880373|gb|EEF15460.1| 50S ribosomal protein L3 [Campylobacter rectus RM3267] Length = 192 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 96/195 (49%), Gaps = 15/195 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ + IPVT+L + N +V + G V G+AK +K + Sbjct: 4 IVEKIGMSR--TVNNPSIPVTLLKVVNAKVCEV---SECGSAIVAYAKGKAK----NKAI 54 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G +++ + F G S + +++ V+ + GKG+ G +K Sbjct: 55 EGQQKKYSLTAEFNKFA---TLQVANKEAGD-LDFSPLSSAKILKVSFSSKGKGYQGVVK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 RH FGG +HG S H+ HGS G R+ PGRV KMAG G +VTVKN E+VS D + Sbjct: 111 RHGFGGGPKSHG-SRFHKRHGSIGNREWPGRVQPGMKMAGHTGNEKVTVKN-EIVSFDAE 168 Query: 186 RGLILVKGCVPGAKK 200 G++++KG V G Sbjct: 169 NGILVLKGSVAGYNG 183 >gi|322378779|ref|ZP_08053208.1| 50S ribosomal protein L3 [Helicobacter suis HS1] gi|322380628|ref|ZP_08054780.1| 50S ribosomal protein L3 [Helicobacter suis HS5] gi|321146950|gb|EFX41698.1| 50S ribosomal protein L3 [Helicobacter suis HS5] gi|321148809|gb|EFX43280.1| 50S ribosomal protein L3 [Helicobacter suis HS1] Length = 194 Score = 141 bits (357), Expect = 6e-32, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 16/192 (8%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + +K+GM+ + + +PVT+L + + +V + G + V + +K + Sbjct: 4 LVQKIGMSRI--VGASSVPVTLLKVLDSKVCEIK----EGQLLVAYALHKKH----NKAI 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G +S + F + VG S Q + T T G+GFSGAMK Sbjct: 54 AGQQKKYQLS---QEFNHFATLKGHVEAVGD-LSIEPLEGVQYIKATFYTKGRGFSGAMK 109 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF G A HG S HR GS G R+ PGRV K KKMAG G +VT N +V+S D + Sbjct: 110 RWNFQGGPAAHG-SRFHRRLGSIGNREWPGRVQKGKKMAGHYGNEKVTCHN-QVLSFDKE 167 Query: 186 RGLILVKGCVPG 197 ++++KG G Sbjct: 168 NKILVLKGSTAG 179 >gi|39938686|ref|NP_950452.1| ribosomal protein L3 [Onion yellows phytoplasma OY-M] gi|42559576|sp|P60455|RL3_ONYPE RecName: Full=50S ribosomal protein L3 gi|39721795|dbj|BAD04285.1| ribosomal protein L3 [Onion yellows phytoplasma OY-M] Length = 157 Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats. Identities = 57/152 (37%), Positives = 83/152 (54%), Gaps = 9/152 (5%) Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDL----LPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120 M G F +PK+ + E D + L VG++ + F VG LVDVTG + GKGF Sbjct: 1 MLGHFKKATTAPKRFIKEINFSADVNSNLANLAVGALITNDLFQVGDLVDVTGTSKGKGF 60 Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180 +G++KRHN +HG S HR GS K KK+ G MG VT++NL ++ Sbjct: 61 AGSIKRHNQSRGPESHG-SRYHRRPGSM---GPIKGKLKGKKLPGHMGHETVTIQNLAIL 116 Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 SVD ++ L L+KG VPG K +++++ + K Sbjct: 117 SVDTEKNLFLIKGNVPGPNKG-FVIIKSAVKK 147 >gi|149195353|ref|ZP_01872439.1| 50S ribosomal protein L3 [Caminibacter mediatlanticus TB-2] gi|149134485|gb|EDM22975.1| 50S ribosomal protein L3 [Caminibacter mediatlanticus TB-2] Length = 192 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 91/202 (45%), Gaps = 16/202 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ + IPVT+L + +V + ++G V G+ V+KP+ Sbjct: 4 IVEKIGMSRTVGE--KSIPVTLLKIVPAKVCEVK---EDGKALVAYPKGKK----VNKPI 54 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G +S K F V+ G S + V +T + G+GF G +K Sbjct: 55 EGMQKKYGLS---KEFNRFVELKVANTEAGD-LSLEPLNEAKKVKITFKSKGRGFQGVVK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R+ G S HR+ GS G + PGRV KKM G G VTV N EVV + Sbjct: 111 RYG-FGGGPGSHGSRFHRAPGSIGNCEFPGRVMPGKKMPGHYGNKNVTV-NAEVVEFNPD 168 Query: 186 RGLILVKGCVPGAKKNSWILVR 207 G++++KG VPGA S +R Sbjct: 169 MGVLVIKGSVPGAN-GSLGKIR 189 >gi|152993893|ref|YP_001359614.1| 50S ribosomal protein L3 [Sulfurovum sp. NBC37-1] gi|151425754|dbj|BAF73257.1| 50S ribosomal protein L3 [Sulfurovum sp. NBC37-1] Length = 193 Score = 139 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 15/202 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ ++ +PVT+L + + +V + ++G V + + ++K + Sbjct: 4 IVEKIGMSRTVDVP--SVPVTLLKVVDTKVCEVK---EDGKALVAYNSSKK----LNKSI 54 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G + VS + +F + + G +P+ V + T G+GFSG MK Sbjct: 55 EGQQTKFGVSKEFN--KFMTIEVAEGTEAGD-LNPAALAEAAAVKTSLNTKGRGFSGGMK 111 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 RHNFGG +HG R GS G + PGRV K KKM G+ G +VTVKN +VVS D + Sbjct: 112 RHNFGGGPGSHG-HRFGRRIGSIGNAEWPGRVQKGKKMPGQYGNTKVTVKN-DVVSFDAE 169 Query: 186 RGLILVKGCVPGAKK-NSWILV 206 G++++KG +PG + + Sbjct: 170 NGILVLKGSIPGHNGARGLVRI 191 >gi|34558027|ref|NP_907842.1| 50S ribosomal protein L3 [Wolinella succinogenes DSM 1740] gi|42559590|sp|Q7M8D4|RL3_WOLSU RecName: Full=50S ribosomal protein L3 gi|34483745|emb|CAE10742.1| 50S RIBOSOMAL PROTEIN L3 [Wolinella succinogenes] Length = 192 Score = 137 bits (347), Expect = 7e-31, Method: Composition-based stats. Identities = 62/195 (31%), Positives = 91/195 (46%), Gaps = 15/195 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ ++ PVT+L + + +V NG V G+ +K + Sbjct: 4 LVEKIGMSRTISVP--STPVTLLKVKDAKVCEVL---GNGKALVAYAQGKD----ANKAI 54 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G N+S K F + G + V V+ T G+GF+G MK Sbjct: 55 EGQQKKYNLS---KEFNRFATLEVANGEAGDQ-DVAPLAQAVRVKVSLQTKGRGFTGVMK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF G A HG R GS G R+ PGRV KKMAG+ G +VTV+N E+VS D + Sbjct: 111 RWNFAGGPAAHG-HRFKRRTGSIGNREWPGRVQPGKKMAGQYGNEKVTVQN-EIVSFDAE 168 Query: 186 RGLILVKGCVPGAKK 200 ++++KG +PG Sbjct: 169 NKILVLKGSIPGFNG 183 >gi|315639321|ref|ZP_07894483.1| 50S ribosomal protein L3 [Campylobacter upsaliensis JV21] gi|315480647|gb|EFU71289.1| 50S ribosomal protein L3 [Campylobacter upsaliensis JV21] Length = 192 Score = 137 bits (346), Expect = 9e-31, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 96/195 (49%), Gaps = 15/195 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ + I VT+L + +V + G V G+A +K + Sbjct: 4 IVEKIGMSR--TVSNPSIAVTLLRVVGAKVCEV---QEGGKALVAYSKGKAN----NKCI 54 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G N+S + F + G S +++ V+ + G+G+SG MK Sbjct: 55 AGMQKKYNLSAEFNKFA---TLEVANTEAGD-LDESPLNEAKILKVSFNSKGRGYSGVMK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 RHNFGG A+HG S HR HGS G R+ PGRV KMAG G +V+VKN E+VS D + Sbjct: 111 RHNFGGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGHYGNAKVSVKN-ELVSYDAE 168 Query: 186 RGLILVKGCVPGAKK 200 ++++KG VPG Sbjct: 169 NKILVLKGAVPGFNG 183 >gi|213423716|ref|ZP_03356696.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 101 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 57/102 (55%), Positives = 73/102 (71%), Gaps = 1/102 (0%) Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 VTG + GKGF+G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG Sbjct: 1 VTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNE 60 Query: 171 RVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 RVTV++L+VV VD +R L+LVKG VPGA ++V+ + K+ Sbjct: 61 RVTVQSLDVVRVDAERNLLLVKGGVPGA-TGCDLIVKPAVKA 101 >gi|57505356|ref|ZP_00371285.1| ribosomal protein L3 [Campylobacter upsaliensis RM3195] gi|57016492|gb|EAL53277.1| ribosomal protein L3 [Campylobacter upsaliensis RM3195] Length = 192 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 98/195 (50%), Gaps = 15/195 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ + I VT+L + +V ++G V G+A +K + Sbjct: 4 IVEKIGMSR--TVSNPSIAVTLLRVVGAKVCEV---QESGKALVAYSKGKAN----NKCI 54 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G N+S + F + G S +++ V+ + G+G+SG MK Sbjct: 55 AGMQKKYNLSAEFNKFA---TLEVANTEAGD-LDESPLNEAKILKVSFNSKGRGYSGVMK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 RHNFGG A+HG S HR HGS G R+ PGRV KMAG+ G +++VKN E+VS D + Sbjct: 111 RHNFGGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGQYGNTKISVKN-ELVSYDAE 168 Query: 186 RGLILVKGCVPGAKK 200 ++++KG VPG Sbjct: 169 NKILVLKGAVPGFNG 183 >gi|154305466|ref|XP_001553135.1| hypothetical protein BC1G_08502 [Botryotinia fuckeliana B05.10] gi|150853289|gb|EDN28481.1| hypothetical protein BC1G_08502 [Botryotinia fuckeliana B05.10] Length = 189 Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats. Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 1/116 (0%) Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G + K GMT +Y+ G R P TV+ LD QVV H+T +KNGY AVQVGAG Sbjct: 74 LRTGALGIKKGMTALYDPETGVRTPCTVVQLDRVQVVAHKTREKNGYYAVQVGAGWKHPS 133 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMT 115 NV++P G + V+PK+ + EFRV+ + LL VG +F GQ VD Sbjct: 134 NVTRPELGHYEKSQVAPKRYMAEFRVKNESGLLDVGRSIGAEWFIEGQFVDARANR 189 >gi|307720136|ref|YP_003891276.1| 50S ribosomal protein L3P [Sulfurimonas autotrophica DSM 16294] gi|306978229|gb|ADN08264.1| LSU ribosomal protein L3P [Sulfurimonas autotrophica DSM 16294] Length = 191 Score = 134 bits (339), Expect = 6e-30, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 89/195 (45%), Gaps = 16/195 (8%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ + + PVT+L + + +V G V +G+ ++K + Sbjct: 4 IVEKIGMSRTITVPSK--PVTLLRVLDAKVCEV----NEGTAIVAYNSGKK----MNKAI 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G N+ F V + G + V T T G+GFSGAMK Sbjct: 54 EGQQKKYNLP---TEFNRFVTLEVANAEAGD-LDLAPLADASAVKTTFNTKGRGFSGAMK 109 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NFGG A+HG R GS G + PGRV K KKM G+ G + +VKN E+VS D + Sbjct: 110 RWNFGGGPASHG-HRFGRRTGSIGNAEWPGRVMKGKKMPGQYGNTQNSVKN-EIVSFDAE 167 Query: 186 RGLILVKGCVPGAKK 200 +I V G V GA Sbjct: 168 NKIIAVLGSVSGANG 182 >gi|296272640|ref|YP_003655271.1| 50S ribosomal protein L3 [Arcobacter nitrofigilis DSM 7299] gi|296096814|gb|ADG92764.1| 50S ribosomal protein L3 [Arcobacter nitrofigilis DSM 7299] Length = 191 Score = 134 bits (338), Expect = 9e-30, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 16/196 (8%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ ++ +PVT+L + + +V +G V G+ +K + Sbjct: 4 IVEKIGMSRTVSVP--AVPVTLLKVLDTKVCEV----TDGVAIVSYSNGKK----FNKTI 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G N+S K F + G S +++ T T G+GFSGA+K Sbjct: 54 EGQQKKYNLS---KEFNRFATMEVANSEAGD-LDVSGLAEAKILKTTFKTKGRGFSGAVK 109 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF G RA+HG + R+ GS G + PGRV KKM G+ G V+VKN E+ S D + Sbjct: 110 RWNFAGGRASHGHRMGKRT-GSIGNAEWPGRVQPGKKMPGQYGNTNVSVKN-EIFSFDAE 167 Query: 186 RGLILVKGCVPGAKKN 201 G++ VKG V G Sbjct: 168 TGILAVKGSVSGPNGG 183 >gi|21450877|gb|AAK43985.2|AF370170_1 putative ribosomal protein L3 [Arabidopsis thaliana] Length = 134 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 51/93 (54%), Positives = 69/93 (74%), Gaps = 1/93 (1%) Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KGF G MKRH F G+ A+HG S+SHRS GSTG R PG+VFK +KMAGRMG ++ TVKN+ Sbjct: 1 KGFQGCMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGADQRTVKNV 60 Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 V +D R L+ V+G VPGA+ N ++ ++D++ Sbjct: 61 WVYKIDPARNLMWVRGQVPGAEGN-FVFIKDAW 92 >gi|293553879|ref|ZP_06674485.1| ribosomal protein L3 [Enterococcus faecium E1039] gi|291601931|gb|EFF32177.1| ribosomal protein L3 [Enterococcus faecium E1039] Length = 106 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 60/108 (55%), Positives = 74/108 (68%), Gaps = 3/108 (2%) Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 G ++DVTG T GKGF G +KRH HG S HR GS G P RVFKNK++A Sbjct: 1 AGDIIDVTGTTKGKGFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLA 58 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 GRMGGNRVT++NLEVV VD +R +IL+KG VPGAKK S I ++ + K+ Sbjct: 59 GRMGGNRVTIQNLEVVRVDAERNVILIKGNVPGAKK-SLITIKSAVKA 105 >gi|224373649|ref|YP_002608021.1| 50S ribosomal protein L3 [Nautilia profundicola AmH] gi|223589482|gb|ACM93218.1| ribosomal protein L3 [Nautilia profundicola AmH] Length = 191 Score = 131 bits (329), Expect = 9e-29, Method: Composition-based stats. Identities = 56/195 (28%), Positives = 85/195 (43%), Gaps = 16/195 (8%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ I IPVT+L + +V + + V G+ ++K + Sbjct: 4 IVEKIGMSRTVGIP--SIPVTLLKVVPAKVCEIK----DDKALVAYANGKK----LNKAI 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G + K F V+ G S + V +T + G+GF G +K Sbjct: 54 EGMQKKYGLD---KEFNRFVELKVANTEPGD-LSIEPLKEAKKVKLTFKSKGRGFQGVVK 109 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 RH S HR+ GS G + PGRV +KM G+ G VTV N EV+ D+ Sbjct: 110 RHG-FAGGPGGHGSRFHRAPGSIGNCEWPGRVMPGRKMPGQYGNKNVTV-NAEVLEYDEN 167 Query: 186 RGLILVKGCVPGAKK 200 G++++KG VPGA Sbjct: 168 MGVLVIKGSVPGANG 182 >gi|313681319|ref|YP_004059057.1| LSU ribosomal protein l3p [Sulfuricurvum kujiense DSM 16994] gi|313154179|gb|ADR32857.1| LSU ribosomal protein L3P [Sulfuricurvum kujiense DSM 16994] Length = 191 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 60/195 (30%), Positives = 94/195 (48%), Gaps = 16/195 (8%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ ++ + VT+L + +V +G V G++ +KP+ Sbjct: 4 IVEKIGMSRTISVPSKV--VTLLKVKEIKVCEV----NDGVALVAYSQGKS----TNKPV 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G N+S + F + G + V + T G+GF+G MK Sbjct: 54 EGQQKKYNLSAEFNKFA---TLEVANTEAGD-LDMAPLANATTVKSSFNTKGRGFTGVMK 109 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF G HG HR+ GS G R+ PG+V K +KM+G+ G +VTVKN EV+S D + Sbjct: 110 RWNFAGGPGAHG-HRFHRTGGSIGNREWPGKVQKGRKMSGQYGDEQVTVKN-EVMSYDAE 167 Query: 186 RGLILVKGCVPGAKK 200 G+++V G +PGA Sbjct: 168 NGVLVVVGSIPGANG 182 >gi|71027797|ref|XP_763542.1| 50S ribosomal protein L3 [Theileria parva strain Muguga] gi|68350495|gb|EAN31259.1| 50S ribosomal protein L3, putative [Theileria parva] Length = 161 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 2/124 (1%) Query: 92 LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151 +G + S F VTG+T GKGF G +KRH F +HG S HR GS G Sbjct: 36 YVLGQLVDVSSFVGCTHAKVTGITKGKGFQGTIKRHGFKRGPMSHG-SKHHRGPGSIGAS 94 Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211 PG V K+MAGRMGG R T + L+++ ++ + L+ +KG V G K S++ V + Sbjct: 95 TTPGCVKPGKRMAGRMGGKRCTFRKLKILGLNPETSLLYLKGLVAGP-KGSYVTVTSDVQ 153 Query: 212 SAVN 215 + Sbjct: 154 PPLK 157 >gi|237751236|ref|ZP_04581716.1| 50S ribosomal protein L3 [Helicobacter bilis ATCC 43879] gi|229372602|gb|EEO22993.1| 50S ribosomal protein L3 [Helicobacter bilis ATCC 43879] Length = 197 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 67/195 (34%), Positives = 97/195 (49%), Gaps = 15/195 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + +K+GM+ + + VT+L + N +V L++NG V G+ +K + Sbjct: 4 IVQKVGMSRIIATPSQA--VTLLKVLNAKVCK---LEENGKALVAYSKGKT----CNKSI 54 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G N+S K F VG S + G++V T G+GFSGAMK Sbjct: 55 EGNQKKYNLS---KEFNRFATLKVANTEVGD-LDMSSLSDGKVVKAGFKTKGRGFSGAMK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF G A HG S HR GS G R+ PGRV KKMAG G V+V++ E++S D + Sbjct: 111 RWNFQGGPAAHG-SRFHRRLGSIGNREWPGRVQPGKKMAGHYGDEIVSVRS-EIISFDTQ 168 Query: 186 RGLILVKGCVPGAKK 200 G++++KG V G Sbjct: 169 SGILVLKGSVAGYNG 183 >gi|66766345|dbj|BAD99041.1| ribosomal protein L3 [Desulfovibrio vulgaris] Length = 115 Score = 129 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 1/113 (0%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 + G++ RK+GMT ++ +G + VTV+ C V+ R + +GY AVQ+ EAK K+V Sbjct: 4 KLGILGRKVGMTRIFASDGSAVAVTVIQAGPCPVIQVRNGETDGYDAVQIAFEEAKEKHV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGM 114 +KP RG F+ + L E R++ + VG + S F G+ V VTG Sbjct: 64 TKPARGHFAKAGKGLFRNLREIRLEAPAE-FEVGQELTVSLFAAGEKVKVTGT 115 >gi|78776487|ref|YP_392802.1| 50S ribosomal protein L3 [Sulfurimonas denitrificans DSM 1251] gi|78497027|gb|ABB43567.1| LSU ribosomal protein L3P [Sulfurimonas denitrificans DSM 1251] Length = 191 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 60/195 (30%), Positives = 91/195 (46%), Gaps = 16/195 (8%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ + + PVT+L + + +V + N A+ V K ++K + Sbjct: 4 IVEKIGMSRTITVPSK--PVTLLRVLDAKVC-----EVNENSAI-VAYKSGK--KMNKAI 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G ++S F V + G + +++ T T G+GF+GAMK Sbjct: 54 EGQQKKYSIS---SEFNRFVTLEVANSEAGD-IDLTPLAEAKVIKATFTTKGRGFTGAMK 109 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF G A HG R GS G + PGRV K KKM G+ G + +VKN E++S D + Sbjct: 110 RWNFSGGPAEHG-HRFGRRTGSIGNAEWPGRVMKGKKMPGQYGNTQNSVKN-EIISFDAE 167 Query: 186 RGLILVKGCVPGAKK 200 +I V G V GA Sbjct: 168 NKIIAVVGSVSGANG 182 >gi|212724032|ref|NP_001132440.1| hypothetical protein LOC100193892 [Zea mays] gi|194694386|gb|ACF81277.1| unknown [Zea mays] Length = 232 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 3/124 (2%) Query: 3 SGVVARKLGMTCVYN-IEGRRIPVTVLHL--DNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 GV+A K+GM ++ G+ +PVTV+ V +T +GY AVQVG + Sbjct: 45 VGVMATKVGMMTYFDPETGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVRED 104 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 +++P G P + L EFR+ D P + F G L+DV+G +IGKG Sbjct: 105 KLTRPELGHLGKAGAPPLRHLQEFRLTAVDAFEPGQPLDFADLFKEGDLIDVSGNSIGKG 164 Query: 120 FSGA 123 F G+ Sbjct: 165 FQGS 168 >gi|124487970|gb|ABN12068.1| mitochondrial ribosomal protein L3-llike protein [Maconellicoccus hirsutus] Length = 170 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 1/114 (0%) Query: 96 SVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 + +F VG VDV G+TI +GF G MKR F G ATHG + +HR G+ G +D Sbjct: 1 TPLLAPHFKVGDYVDVRGLTIQRGFQGVMKRWGFHGQPATHGQTKTHRRPGTIGRGRD-K 59 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209 +V KK+ G MG T++ L+++ ++ K +I V+G NS + V D+ Sbjct: 60 KVQIGKKLPGHMGYRYRTLRGLQILRMNTKYNVIWVQGQAIAGDTNSIVYVYDT 113 >gi|293556601|ref|ZP_06675169.1| ribosomal protein L3 [Enterococcus faecium E1039] gi|291601277|gb|EFF31561.1| ribosomal protein L3 [Enterococcus faecium E1039] Length = 101 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 1/102 (0%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQVKTMETDGYEAIQVGYQDMREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSY 102 +KP +G + N +PK+ + EF+ + VG + Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFK-NVELGEYEVGKEITVDV 101 >gi|86152355|ref|ZP_01070565.1| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 260.94] gi|85840652|gb|EAQ57904.1| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 260.94] Length = 170 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 62/183 (33%), Positives = 87/183 (47%), Gaps = 16/183 (8%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ I VT+L + N +V + G V G+A +K + Sbjct: 4 IVEKIGMSRTITNP--SIAVTLLRVVNAKVCEV----EGGKALVAYPKGKAS----NKCV 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G N+S + F + G + +++ V+ T G+G+SG MK Sbjct: 54 AGQQKKYNLSAEYNRFA---TLEVANTEAGD-LDETPLNEAKILKVSFNTKGRGYSGVMK 109 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 RHNF G A+HG S HR HGS G R+ PGRV KMAG G +VTVKN EVVS D + Sbjct: 110 RHNFAGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGHYGNTKVTVKN-EVVSYDAE 167 Query: 186 RGL 188 + Sbjct: 168 NKI 170 >gi|323304802|gb|EGA58561.1| Mrpl9p [Saccharomyces cerevisiae FostersB] Length = 119 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 47/94 (50%), Positives = 64/94 (68%), Gaps = 1/94 (1%) Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR+ F GLRA+HG SI HR GS G QDPGRV +KM G MG VT++N++V+ VD Sbjct: 1 MKRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVLKVD 60 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 D+ +I VKG V G KNS++ ++D+ K ++ K Sbjct: 61 DENNVIWVKGSVAGP-KNSFVKIQDAIKKNLSIK 93 >gi|218678066|ref|ZP_03525963.1| 50S ribosomal protein L3 [Rhizobium etli CIAT 894] Length = 137 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 67/123 (54%), Positives = 82/123 (66%), Gaps = 1/123 (0%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 MT VYN G +PVTVL ++ QVV RT++KNGY AVQ+GAG+AKVKN SK MRG F+ Sbjct: 1 MTRVYNDAGEHVPVTVLRMEAVQVVATRTVEKNGYTAVQLGAGQAKVKNTSKAMRGNFAV 60 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 NV PK KL EFRV +D +LL +G+ +F GQLVDVTG TIGKGF+ + F Sbjct: 61 ANVEPKAKLQEFRVSED-NLLEIGTELKAGHFAAGQLVDVTGTTIGKGFARRHEAPRFRR 119 Query: 132 LRA 134 Sbjct: 120 SPR 122 >gi|161546624|ref|NP_860909.2| 50S ribosomal protein L3 [Helicobacter hepaticus ATCC 51449] gi|42559601|sp|Q7VGE4|RL3_HELHP RecName: Full=50S ribosomal protein L3 Length = 192 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 91/195 (46%), Gaps = 15/195 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ I + VT+L + +V NG V G++ V+K + Sbjct: 4 IVEKIGMSR--TIGTKSEAVTLLRVLGAKVCEIYD---NGKALVAYSQGKS----VNKAI 54 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G ++S K F VG + + + V V+ T G+GFSGAMK Sbjct: 55 AGQQKKYSLS---KEFNRFATLKVSNKEVG-ELDVASLSEAKRVQVSFKTKGRGFSGAMK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF G HG S HR GS G R+ PGRV KKMAG G V+ KN +++S D + Sbjct: 111 RWNFQGGPGAHG-SRFHRRLGSIGNREWPGRVQPGKKMAGHYGNELVSAKN-DIMSFDKQ 168 Query: 186 RGLILVKGCVPGAKK 200 ++++KG V G Sbjct: 169 SAILVLKGSVAGFNG 183 >gi|157737003|ref|YP_001489686.1| 50S ribosomal protein L3 [Arcobacter butzleri RM4018] gi|315636195|ref|ZP_07891449.1| 50S ribosomal protein L3 [Arcobacter butzleri JV22] gi|157698857|gb|ABV67017.1| 50S ribosomal protein L3 [Arcobacter butzleri RM4018] gi|315479556|gb|EFU70235.1| 50S ribosomal protein L3 [Arcobacter butzleri JV22] Length = 191 Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats. Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 17/205 (8%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + +K+GM+ ++ VT+L + + +V G V G+ +K + Sbjct: 4 IVQKIGMSRTVSVP--STAVTLLRVLDTKVCEV----TEGVALVSYSNGKK----FNKAI 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G N+S + F + + S ++V T T G+GFSGA+K Sbjct: 54 EGQQKKFNLSKEFNRFATITVANAEA----GDLDVSGLGEAKVVKSTFKTKGRGFSGAVK 109 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF G RA+HG + R+ GS G + PGRV KKM G+ G V+VKN E++S D + Sbjct: 110 RWNFAGGRASHGHRMGKRT-GSIGNCEWPGRVQPGKKMPGQYGNTNVSVKN-EIISFDAE 167 Query: 186 RGLILVKGCVPGAKKNSWILVRDSF 210 G++++KG V GA S ++ + Sbjct: 168 TGILVLKGSVSGAN-GSLGKIKVAK 191 >gi|253795616|ref|YP_003038712.1| putative 50S ribosomal subunit protein L3 [Candidatus Hodgkinia cicadicola Dsem] gi|253739924|gb|ACT34259.1| putative 50S ribosomal subunit protein L3 [Candidatus Hodgkinia cicadicola Dsem] Length = 181 Score = 124 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 64/181 (35%), Positives = 94/181 (51%), Gaps = 19/181 (10%) Query: 23 IPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFE 82 + VT+L + C VV + +G V VG N++ + + ++ + Sbjct: 7 VAVTLLDVLACVVVYVSS---DG---VVVGY------NLN-------ARLGLTSCVSVRR 47 Query: 83 FRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISH 142 GSV S + DV GKGF+G +KRH F GLRA+HGVS++H Sbjct: 48 AFKAHVKLPNEFGSVLSADWLARAHATDVNARCKGKGFAGVIKRHGFSGLRASHGVSLAH 107 Query: 143 RSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNS 202 R+ G+ G RQDPGRV+K KMAGR+GG VT+K ++VV++D + +KG VPG + Sbjct: 108 RACGAIGSRQDPGRVWKGTKMAGRLGGGFVTLKRVKVVALDSFCQRVTLKGPVPGGSRAC 167 Query: 203 W 203 Sbjct: 168 V 168 >gi|406362|gb|AAD12434.1| unknown [Mycoplasma genitalium] Length = 154 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 55/155 (35%), Positives = 80/155 (51%), Gaps = 7/155 (4%) Query: 24 PVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEF 83 P+T+++ + QV +T+ K+ Y A + K ++KP +GFFS + + P K L E Sbjct: 3 PITIVYCEANQVAGIKTIAKDNYNATLLSFQTVDEKQLNKPKQGFFSKLKLEPHKYLREI 62 Query: 84 RVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISH 142 R +G +P F +G+ VDVT +T G+GF+GA+KR NF HG H Sbjct: 63 R---KMQGFELGKKITPQELFKIGEYVDVTSLTKGRGFTGAIKRWNFKIGPLGHGAGYPH 119 Query: 143 RSHGSTGC---RQDPGRVFKNKKMAGRMGGNRVTV 174 R GS RVFK KKM+G G +VT+ Sbjct: 120 RFQGSVQAGRGGSSAQRVFKGKKMSGHYGHEQVTI 154 >gi|323337449|gb|EGA78698.1| Mrpl9p [Saccharomyces cerevisiae Vin13] Length = 119 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 45/94 (47%), Positives = 63/94 (67%), Gaps = 1/94 (1%) Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183 MKR+ F GLRA+HG SI HR GS G QDPGRV +KM G MG VT++N++V+ VD Sbjct: 1 MKRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVLKVD 60 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 D+ +I VKG V G KNS++ ++D+ ++ + Sbjct: 61 DENNVIWVKGSVAGP-KNSFVKIQDAIXKNLSIR 93 >gi|224437283|ref|ZP_03658255.1| 50S ribosomal protein L3 [Helicobacter cinaedi CCUG 18818] gi|313143738|ref|ZP_07805931.1| 50S ribosomal protein L3 [Helicobacter cinaedi CCUG 18818] gi|313128769|gb|EFR46386.1| 50S ribosomal protein L3 [Helicobacter cinaedi CCUG 18818] Length = 192 Score = 121 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 89/195 (45%), Gaps = 15/195 (7%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ I + VT+L + +V +NG V G A ++K + Sbjct: 4 IVEKIGMSR--TIGTKSEAVTLLRVLGAKVCEVY---ENGKGLVAYSQGRA----INKAV 54 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G ++S K F VG + V V T G+GFSGAMK Sbjct: 55 AGQQKKYSLS---KEFNRFATLKLGNKEVG-ELDTGVLGEAKCVQVRFKTKGRGFSGAMK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185 R NF G A HG S HR GS G R+ PGRV KKMAG G V+ KN +V+S D + Sbjct: 111 RWNFQGGPAAHG-SRFHRRLGSIGNREWPGRVQPGKKMAGHYGNELVSGKN-DVMSFDKE 168 Query: 186 RGLILVKGCVPGAKK 200 ++++KG V G Sbjct: 169 SAILVLKGSVAGFNG 183 >gi|94993441|ref|YP_601539.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10750] gi|94546949|gb|ABF36995.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10750] Length = 88 Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 49/83 (59%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + + Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLFEF 83 +KP +G + N +PK+ + EF Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF 83 >gi|153803653|ref|ZP_01958239.1| ribosomal protein L3 [Vibrio cholerae MZO-3] gi|124120812|gb|EAY39555.1| ribosomal protein L3 [Vibrio cholerae MZO-3] Length = 93 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 54/89 (60%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV G K V+ Sbjct: 2 IGLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGSKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDL 91 KP G F+ V + L+EFR++ ++ Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLENGEEF 90 >gi|213416462|ref|ZP_03349606.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 97 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 1/97 (1%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS 99 KP G F+ V + L+EFR+ + ++ VG S Sbjct: 62 KPEAGHFAKAGVEAGRGLWEFRLAEGEE-YTVGQSIS 97 >gi|581341|emb|CAA78677.1| ribosomal protein L3 [Mycobacterium leprae] Length = 100 Score = 117 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 2/97 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R G++ KLGMT V++ R +PVTV+ V RTL+++GY AVQ+ GE + V Sbjct: 4 RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTLERDGYSAVQLAYGEISPRKV 63 Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGS 96 +KP+ G ++S V+P++ L E R+ D VG Sbjct: 64 NKPVTGQYNSAGVNPRRYLAELRLDHPDAAAEYEVGQ 100 >gi|314984921|gb|EFT29013.1| 50S ribosomal protein L3 domain protein [Propionibacterium acnes HL005PA1] Length = 89 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 33/77 (42%), Positives = 46/77 (59%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 GV+ KLGMT +++ R +PVTV+ C V RT + +GY AVQ+G G K KNV+ Sbjct: 13 KGVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKNVT 72 Query: 63 KPMRGFFSSVNVSPKKK 79 KP G F V+P++ Sbjct: 73 KPEAGHFEKAGVTPRRH 89 >gi|41615218|ref|NP_963716.1| 50S ribosomal protein L3P [Nanoarchaeum equitans Kin4-M] gi|42559579|sp|P60458|RL3_NANEQ RecName: Full=50S ribosomal protein L3P gi|40068942|gb|AAR39277.1| NEQ433 [Nanoarchaeum equitans Kin4-M] Length = 321 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 69/267 (25%), Positives = 106/267 (39%), Gaps = 60/267 (22%) Query: 7 ARKLGMTC-VYNIEGRRI--PVTVLHLDNCQVVVHR-TLDKNG---------------YM 47 A K+GMT + NI G R+ PVTVL V+ + +NG Y+ Sbjct: 45 AYKVGMTHTILNINGERVFTPVTVLEAPELLVIGAKAYKKENGALKEISSLYFNDLPQYV 104 Query: 48 AVQV------GAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP-------- 93 ++ E K + +SK + VS + + + + +P Sbjct: 105 FRKIPKLKNYNFEEKKEQFLSKADNADEVKIIVSTQPWKIKLKKTPEIFDIPIGGSDVNK 164 Query: 94 --------VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRS 144 +G S F GQ VDV +T GKGF G +KR F R H R Sbjct: 165 KLEYALSLLGKELSINDVFKEGQYVDVIAVTKGKGFQGVIKR--FHVHRRQHKSEKGVRK 222 Query: 145 HGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL--------------IL 190 G+ G R PGR+F M G+MG +R T N ++ + + + IL Sbjct: 223 VGAIGSRG-PGRIFPTVPMPGQMGYHRRTEYNKLIIKIGEPLNVEGGWVRYGQVIGPTIL 281 Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNCK 217 +KG VPG +K I++R++ + + Sbjct: 282 LKGSVPGPRKR-LIILREAIRPPRKQE 307 >gi|227871804|ref|ZP_03990207.1| possible ribosomal protein L3 [Oribacterium sinus F0268] gi|227842340|gb|EEJ52567.1| possible ribosomal protein L3 [Oribacterium sinus F0268] Length = 81 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 35/81 (43%), Positives = 50/81 (61%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M+ ++A K+GMT +++ G IPVTVL C V +TL+ +GY AVQVG E + K Sbjct: 1 MKKAILATKVGMTQIWDENGVLIPVTVLQAGPCVVTQVKTLENDGYKAVQVGFLEKREKL 60 Query: 61 VSKPMRGFFSSVNVSPKKKLF 81 V+KP++G F VS K+ L Sbjct: 61 VNKPLKGQFDKAGVSYKRFLR 81 >gi|32262929|gb|AAP77975.1| ribosomal protein L3 [Helicobacter hepaticus ATCC 51449] Length = 183 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 87/189 (46%), Gaps = 15/189 (7%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71 M+ I + VT+L + +V NG V G++ V+K + G Sbjct: 1 MSR--TIGTKSEAVTLLRVLGAKVCEIYD---NGKALVAYSQGKS----VNKAIAGQQKK 51 Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 ++S K F VG + + + V V+ T G+GFSGAMKR NF G Sbjct: 52 YSLS---KEFNRFATLKVSNKEVG-ELDVASLSEAKRVQVSFKTKGRGFSGAMKRWNFQG 107 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 HG S HR GS G R+ PGRV KKMAG G V+ KN +++S D + ++++ Sbjct: 108 GPGAHG-SRFHRRLGSIGNREWPGRVQPGKKMAGHYGNELVSAKN-DIMSFDKQSAILVL 165 Query: 192 KGCVPGAKK 200 KG V G Sbjct: 166 KGSVAGFNG 174 >gi|70951495|ref|XP_744983.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56525155|emb|CAH78805.1| hypothetical protein PC001313.02.0 [Plasmodium chabaudi chabaudi] Length = 185 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 4/139 (2%) Query: 79 KLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGV 138 K+ EF+ D LPV FS +F+ GQ + ++ KGF GAM++ NF G +HG Sbjct: 1 KIREFKCTSDC-FLPVQHKFSARHFSPGQNLFISSSIKNKGFCGAMQKWNFSGKNQSHGT 59 Query: 139 -SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEVVSVDDKRGLILVKGCVP 196 S +HRS GS + VF+NKKM +G V N ++ ++ + L+ +KG + Sbjct: 60 ESKAHRSLGSVSMGKTINIVFRNKKMNTHIGEKSLVKCSNNKLFRINSLKNLLFIKGTI- 118 Query: 197 GAKKNSWILVRDSFKSAVN 215 G KN I + D+ A N Sbjct: 119 GGYKNKIIKISDAKGRAFN 137 >gi|261884192|ref|ZP_06008231.1| 50S ribosomal protein L3 [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 153 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 46/164 (28%), Positives = 69/164 (42%), Gaps = 14/164 (8%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ + PVT+L L +V L + G V +A +K + Sbjct: 4 IVEKIGMSR--TVSAPSTPVTLLRLVPAKVCE---LGEGGKAIVAYAHTKAD----NKAI 54 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 +G +S + F G + +++ V+ T G+GF G +K Sbjct: 55 KGQQKKYGLSSEFNSFA---TLSVANSEAGD-LDVNPLNEAKVLKVSFNTKGRGFQGVIK 110 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169 RH F A+HG S HR GS G + PGRV +KMAG G Sbjct: 111 RHGFLCGPASHG-SRFHRRPGSIGNCEWPGRVQPGRKMAGHYGN 153 >gi|313631759|gb|EFR98952.1| ribosomal protein L3 [Listeria seeligeri FSL N1-067] Length = 93 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 40/93 (43%), Positives = 55/93 (59%), Gaps = 2/93 (2%) Query: 96 SVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 + F G ++D TG++ GKGF G +KRH HG S HR GS G P Sbjct: 1 AEVKVDVFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PN 58 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188 RVFKNK + GRMGG ++T++NLE+V VD ++ + Sbjct: 59 RVFKNKLLPGRMGGEQITIQNLEIVKVDVEKNV 91 >gi|288931510|ref|YP_003435570.1| ribosomal protein L3 [Ferroglobus placidus DSM 10642] gi|288893758|gb|ADC65295.1| ribosomal protein L3 [Ferroglobus placidus DSM 10642] Length = 329 Score = 112 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 64/273 (23%), Positives = 102/273 (37%), Gaps = 65/273 (23%) Query: 4 GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHR-------------- 39 G K GMT V I+ R+ +PVTVL +V+ R Sbjct: 39 GFAGYKAGMTHVIMIDDRKNSPTYGEEIMVPVTVLETPPMKVMGIRVYRKTVYGLQIAGE 98 Query: 40 --TLDKNGYMAVQVGAGEAK----------------VKNVSKPMR--GFFSSV-NVSPKK 78 T + + Y++ ++ + K V ++P G V +V +K Sbjct: 99 VWTDEVDSYLSRRLQIPKKKGDVDKLKEIDDIAEVRVITYTQPYLITGVPKKVPDVMEQK 158 Query: 79 KLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHG 137 + + + +G F G +DV +T GKGF G +KR L A H Sbjct: 159 VGGDVEAALNYAIEKLGKEVRVNEVFKEGAFIDVLSITKGKGFQGPVKRWGVITLDAKHA 218 Query: 138 VSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS-------VDDKRGLI- 189 S HR G+ G P RV AG+MG ++ T N ++ ++ + G + Sbjct: 219 RSSKHRRVGTLGPW-HPHRVRWTVPQAGQMGFHQRTEYNKRILKIGTNGEDINPEGGFLH 277 Query: 190 ---------LVKGCVPGAKKNSWILVRDSFKSA 213 LV G VPG+ K + +RD+ + Sbjct: 278 YGLVRSDYVLVSGSVPGSVKR-LVRMRDAIRPP 309 >gi|125580740|gb|EAZ21671.1| hypothetical protein OsJ_05302 [Oryza sativa Japonica Group] Length = 116 Score = 112 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 49/102 (48%), Positives = 66/102 (64%), Gaps = 1/102 (0%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F G LVD++G +IGKGF G +KRHNF THG S SHR+ GS G PGRV+K K Sbjct: 1 MFKEGDLVDISGKSIGKGFQGGIKRHNFKRGLMTHG-SKSHRALGSIGAGTTPGRVYKGK 59 Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSW 203 KM GRMGG + ++ L++V +D+ ++++KG VPG N Sbjct: 60 KMPGRMGGTKTKIRKLKIVKIDNDLKVVMIKGAVPGKPGNLL 101 >gi|198462074|ref|XP_001352331.2| GA20958 [Drosophila pseudoobscura pseudoobscura] gi|198139691|gb|EAL29374.2| GA20958 [Drosophila pseudoobscura pseudoobscura] Length = 233 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 2/102 (1%) Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 GF G +KRH + G+ A+HGV+ +HR G+ G + GRV+ KM G MG +K Sbjct: 96 DHGFQGVVKRHGYKGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKMPGHMGNRWRVLKG 155 Query: 177 LEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217 L + + K ++ V+G VPG + + D+ K Sbjct: 156 LRIWRTNAKYNVMWVQGSSVPGP-TGGLVYIYDTILPLRKLK 196 >gi|195175671|ref|XP_002028552.1| GL21036 [Drosophila persimilis] gi|194104882|gb|EDW26925.1| GL21036 [Drosophila persimilis] Length = 712 Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 2/102 (1%) Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176 GF G +KRH + G+ A+HGV+ +HR G+ G + GRV+ KM G MG +K Sbjct: 505 DHGFQGVVKRHGYMGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKMPGHMGNRWRVLKG 564 Query: 177 LEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217 L + K ++ V+G VPG + + D+ K Sbjct: 565 LRIWRTKAKYNVMWVQGSSVPGP-TGGLVYIYDTILPLRKLK 605 >gi|169603664|ref|XP_001795253.1| hypothetical protein SNOG_04840 [Phaeosphaeria nodorum SN15] gi|160706431|gb|EAT87231.2| hypothetical protein SNOG_04840 [Phaeosphaeria nodorum SN15] Length = 190 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 42/92 (45%), Positives = 63/92 (68%), Gaps = 1/92 (1%) Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 +R+G++A K GMT +Y+ G+R TVL LD VV H+T +KNGY AVQ+GAG+ + + Sbjct: 80 LRTGLLALKRGMTAIYDPTTGKRAACTVLQLDRNVVVAHKTREKNGYWAVQIGAGQKEAR 139 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL 91 NV+KPM G F+ +PK+ + EF+V+ + L Sbjct: 140 NVTKPMLGHFAKAETAPKRWVVEFKVKGQEGL 171 >gi|11499509|ref|NP_070750.1| 50S ribosomal protein L3P [Archaeoglobus fulgidus DSM 4304] gi|3914742|sp|O28354|RL3_ARCFU RecName: Full=50S ribosomal protein L3P gi|2648621|gb|AAB89331.1| LSU ribosomal protein L3P (rpl3P) [Archaeoglobus fulgidus DSM 4304] Length = 331 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 67/275 (24%), Positives = 98/275 (35%), Gaps = 67/275 (24%) Query: 4 GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGY------- 46 G K GMT V I+ R+ +PVTV+ +V R K Y Sbjct: 39 GFAGYKAGMTHVVMIDDRKNSPTYGEEVVVPVTVIETPPMKVAAVRVYKKTQYGMQIAAE 98 Query: 47 ---------------------------MAVQVGAGEAKVKNVSKPMR--GFFSSV-NVSP 76 AV+ GA E +V ++P G V +V Sbjct: 99 VWSNNLDDFLDRRLNLPKKEPDVEKLKAAVENGASEVRVVTYTQPYLITGVPKKVPDVME 158 Query: 77 KKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRAT 135 + D + +G S F G ++DV +T GKGF G +KR L A Sbjct: 159 HRIGGNVEEALDYAISKLGKEISVSEVFDEGAIIDVIAVTKGKGFQGPVKRWGVITLDAK 218 Query: 136 HGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--DDKR------- 186 H S HR G+ G +P V AG+MG ++ T N ++ + + + Sbjct: 219 HARSSKHRRVGNLGPW-NPHHVRWTVPQAGQMGFHQRTEYNKRLIKIGENGEEITPKGGF 277 Query: 187 --------GLILVKGCVPGAKKNSWILVRDSFKSA 213 +LV G VPG K I +RD+ + Sbjct: 278 LHYGVIRTQYVLVTGSVPGPVKR-LIRMRDAIRPP 311 >gi|330899737|gb|EGH31156.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. japonica str. M301072PT] Length = 77 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 31/77 (40%), Positives = 44/77 (57%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE + Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60 Query: 61 VSKPMRGFFSSVNVSPK 77 V+ G F+ NV+ Sbjct: 61 VTAAQAGHFAKANVAAG 77 >gi|284162460|ref|YP_003401083.1| ribosomal protein L3 [Archaeoglobus profundus DSM 5631] gi|284012457|gb|ADB58410.1| ribosomal protein L3 [Archaeoglobus profundus DSM 5631] Length = 332 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 63/276 (22%), Positives = 93/276 (33%), Gaps = 69/276 (25%) Query: 4 GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53 G K GMT V I+ R+ +PVTVL +V R Y +Q+ Sbjct: 40 GFAGYKAGMTHVIMIDDRKNSPTYGEEIVVPVTVLECPPMKVAGIRVYKNTMY-GLQIAK 98 Query: 54 G----------------------------------EAKVKNVSKPMR--GFFSSV--NVS 75 E ++ ++P G S + Sbjct: 99 EVWTTELDEHLSRRLPLPKKINTDVESLKNVENIAEVRLITYTQPYLITGVPSKTPDVME 158 Query: 76 PKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRA 134 K + D + +G F G +DV +T GKGF G +KR L A Sbjct: 159 YKVGGSDINAVLDYAISKLGKEIRVSEVFQEGAFIDVIAITKGKGFQGPVKRWGVITLDA 218 Query: 135 THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD---------- 184 H S HR G+ G P RV AG+MG ++ T N ++ + + Sbjct: 219 KHARSSKHRRVGTLGPW-TPHRVRWTVPQAGQMGFHQRTEYNKRIIKIGENGEEITPEGG 277 Query: 185 -------KRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + +LV G VPG K I +RD+ + Sbjct: 278 FVHYGVIRSDYVLVSGSVPGPVKR-LIRMRDAIRPP 312 >gi|288560108|ref|YP_003423594.1| ribosomal protein L3P Rpl3p [Methanobrevibacter ruminantium M1] gi|288542818|gb|ADC46702.1| ribosomal protein L3P Rpl3p [Methanobrevibacter ruminantium M1] Length = 336 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 94/291 (32%), Gaps = 77/291 (26%) Query: 4 GVVARKLGMTC--VYNIEGRR--------IPVTVLHLDNCQVVVHRTLDK--NGYMAV-- 49 G+ K GMT V + + PVTVL + ++ R+ +K +G A+ Sbjct: 40 GLAGYKAGMTHAMVVDNDKNSPSHGMEVFTPVTVLEVPPLVILGIRSYEKTAHGLKAITE 99 Query: 50 -----------------------------QVGAGEAKVKNV---SKPMRGFFSSVNVSPK 77 Q + + V + P P+ Sbjct: 100 VIADNLDEELSRKITLPKDYDQSEAIAKIQDALEKTEEVRVLVHTNPKMASVPKKK--PE 157 Query: 78 KKLFEFRVQKDDDLLP-----VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 ++ L +G F+ GQ VD T GKG G +KR N Sbjct: 158 IFECALGGSSAEEKLNYALGILGQEIRASDIFSEGQYVDAIATTKGKGVQGVVKRWNIRI 217 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD-------- 183 S R GS G P R AG+MG ++ T N +V+ + Sbjct: 218 QYGKAMRSGKGRHVGSIGPWS-PERTMWTVAQAGQMGYHKRTEFNKKVIKIGDVSEVDAV 276 Query: 184 -----------DKRGLILVKGCVPGAKKNSWILVRDSF--KSAVNCKGKVS 221 K +LVKG VPG K +++R + K A + +V+ Sbjct: 277 NPAGGFIRYGLVKNDYVLVKGSVPGPTKR-LVILRQAIRPKKADDAAPQVN 326 >gi|15678033|ref|NP_275147.1| 50S ribosomal protein L3P [Methanothermobacter thermautotrophicus str. Delta H] gi|3122720|sp|O26110|RL3_METTH RecName: Full=50S ribosomal protein L3P gi|2621048|gb|AAB84521.1| ribosomal protein L3 (E.coli ) [Methanothermobacter thermautotrophicus str. Delta H] Length = 337 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 95/283 (33%), Gaps = 75/283 (26%) Query: 4 GVV---ARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGYMAVQ 50 G++ K GMT V ++ ++ PVT+L + V+ RT +K Sbjct: 37 GLLALAGYKAGMTHVMMVDNQKNSPTEGMEVSTPVTILEVPPLTVMAVRTYEKTSRGLKT 96 Query: 51 VGAGEAKV------KNVSKPMRGFFSSVNVSPKKKLFEFRVQ----------------KD 88 +G A + ++ P + + + E+ K Sbjct: 97 LGEVLATETKDDLRRKLTPPADDYDQEAAIEKIRSNMEYVADVRVIVHTNPRLASVPKKK 156 Query: 89 DDLLPVG-------------------SVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129 ++ G V + F+ G VD +T GKGF G +KR Sbjct: 157 PEVFECGLGGKTPEEKFEYALEILGKDVRASEIFSEGAFVDAIAVTKGKGFQGPVKRWGI 216 Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD------ 183 S R GS G P R AG+MG +R T N +++ + Sbjct: 217 RIQYGKAARSSKGRHIGSLGPW-TPSRTMWTVPQAGQMGYHRRTEYNKQILKIGDASEAD 275 Query: 184 -------------DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + +++KG VPG K +++R + ++A Sbjct: 276 LVNPDGGFVRYGLVRNDYVMIKGSVPGPTKR-LVVLRKAIRAA 317 >gi|327400872|ref|YP_004341711.1| 50S ribosomal protein L3 [Archaeoglobus veneficus SNP6] gi|327316380|gb|AEA46996.1| ribosomal protein L3 [Archaeoglobus veneficus SNP6] Length = 329 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 61/274 (22%), Positives = 98/274 (35%), Gaps = 67/274 (24%) Query: 4 GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGYMAVQVG- 52 G K+GMT V ++ R+ +PVTV+ +V R K Y +Q+ Sbjct: 39 GFAGYKVGMTHVVMVDDRKNSLTYGEEIVVPVTVIETPPMKVAGIRVYRKTPY-GMQIAG 97 Query: 53 --------------------------------AGEAKVKNVSKPMR--GFFSSV-NVSPK 77 A E +V ++P G V +V Sbjct: 98 EVWSSDLDNFLGRRLQLPKKSPDVEKLKEIDDAAEVRVITYTQPYLITGIPKKVPDVMEH 157 Query: 78 KKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATH 136 K + D + +G ++ G ++DV +T GKGF G +KR L A H Sbjct: 158 KVGGDVSSALDYAIEKLGKEIRVSEVYSEGAIIDVLSITKGKGFQGPVKRWGVITLDAKH 217 Query: 137 GVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK----------- 185 S HR G G +P + AG+MG ++ T N ++ + + Sbjct: 218 ARSSKHRRVGCLGPW-NPHHIRWTVPQAGQMGFHQRTEFNKRIIKIGEDGSEVTPNGGFP 276 Query: 186 ------RGLILVKGCVPGAKKNSWILVRDSFKSA 213 +L+ G VPG+ K I +RD+ + Sbjct: 277 HYGVVRSDYVLISGSVPGSVKR-LIRMRDAIRPP 309 >gi|169929958|gb|ACB05656.1| 50S ribosomal protein L3 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 94 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 42/87 (48%), Positives = 51/87 (58%), Gaps = 1/87 (1%) Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 + GKG G +KRH F G A HG S R GS G PGRVFK KM GRMG + TV Sbjct: 1 SKGKGTQGVVKRHGFAGGPAGHG-SRFQRHPGSIGSNTTPGRVFKGLKMGGRMGSEQTTV 59 Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKN 201 +NL+VV +D L+ V G VPG ++ Sbjct: 60 RNLKVVKIDADANLVFVSGPVPGRERG 86 >gi|304314253|ref|YP_003849400.1| 50S ribosomal protein L3P [Methanothermobacter marburgensis str. Marburg] gi|302587712|gb|ADL58087.1| 50S ribosomal protein L3P [Methanothermobacter marburgensis str. Marburg] Length = 337 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 57/283 (20%), Positives = 96/283 (33%), Gaps = 75/283 (26%) Query: 4 GVV---ARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGYMAVQ 50 G++ K GMT V ++ ++ PVT+L + V+ R +K Sbjct: 37 GLLALAGYKAGMTHVMMVDNQKNSPTEGMEVSTPVTILEVPPLTVMAVRAYEKTSRGLKT 96 Query: 51 VG---AGEAKV---KNVSKPMRGFFSSVNVSPKKKLFEFRVQ----------------KD 88 +G A E K + ++ P + + + E+ K Sbjct: 97 LGEVLATETKEDLRRKLTPPAEDYDQEAAIERIRSNMEYVADVRVIVHTNPRLASVPKKK 156 Query: 89 DDLLPVG-------------------SVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129 ++ G V + F+ G VD +T GKGF G +KR Sbjct: 157 PEVFECGLGGKTPEEKFEYALGILGKDVRASEIFSEGAFVDAIAVTKGKGFQGPVKRWGI 216 Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD------ 183 S R GS G P R AG+MG +R T N +++ + Sbjct: 217 RIQYGKAARSSKGRHIGSLGPW-TPSRTMWTVPQAGQMGYHRRTEYNKQILKIGDASEAD 275 Query: 184 -------------DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 + ++VKG VPG K +++R + ++A Sbjct: 276 QVNPSGGFVRYGLVRNDYVMVKGSVPGPTKR-LVVLRKAIRAA 317 >gi|42858|emb|CAA23634.1| ribosomal protein L3 [Escherichia coli] Length = 80 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 28/79 (35%), Positives = 45/79 (56%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62 G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V+ Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVT 61 Query: 63 KPMRGFFSSVNVSPKKKLF 81 KP G F+ V + L+ Sbjct: 62 KPEAGHFAKAGVEAGRGLW 80 >gi|124484910|ref|YP_001029526.1| 50S ribosomal protein L3P [Methanocorpusculum labreanum Z] gi|212288407|sp|A2SPK3|RL3_METLZ RecName: Full=50S ribosomal protein L3P gi|124362451|gb|ABN06259.1| LSU ribosomal protein L3P [Methanocorpusculum labreanum Z] Length = 333 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 57/278 (20%), Positives = 95/278 (34%), Gaps = 69/278 (24%) Query: 1 MRSGVVARKLGMTCVYNIEG----------RRIPVTVLHLDNCQVVVHRTLDKNGY---- 46 M G K GMT V I+ +PVTV+ + V R K+ Y Sbjct: 37 MLQGFAGYKAGMTHVIMIDDHKKSPTEGKEVMVPVTVIEIPAMTVAAIRVYVKDTYGKHP 96 Query: 47 ---------MAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP---- 93 A+ +AK N +K +++ + + + + +P Sbjct: 97 LTEVWAENLEALSGRITKAKTNNAAKATEKINAAIGDVVEVMVLMYTKPTELTGVPKKVP 156 Query: 94 ----------------------VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130 +G+ S + GQ D+TG+T GKGF GA+KR Sbjct: 157 DLMEIRVAGGSAQERFDYALSILGTDVDMKSLLSEGQFADITGITKGKGFQGAVKRFGIT 216 Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD------- 183 + H + R G+ G P V M G+MG + T N ++ + Sbjct: 217 LRKRKHARTKKERHIGTLGPW-TPHHVRWQVPMPGQMGFQQRTEFNKRIIKIGENADEIN 275 Query: 184 ----------DKRGLILVKGCVPGAKKNSWILVRDSFK 211 + +L+KG +PG K + +R + + Sbjct: 276 PAGGFLHYGLVRNNYVLIKGSIPGPAKR-LVRIRSATR 312 >gi|260891594|ref|ZP_05902857.1| hypothetical protein GCWU000323_02809 [Leptotrichia hofstadii F0254] gi|260858702|gb|EEX73202.1| ribosomal protein L3 [Leptotrichia hofstadii F0254] Length = 90 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 2/90 (2%) Query: 124 MKRHNFGGLRATHGVSISHRSHGST-GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 MKRHNFGG RA+HGVS +HR GS G V K KKMAGR+G +VTV+NL+V+ Sbjct: 1 MKRHNFGGNRASHGVSRNHRLGGSNAGGAASNSNVPKGKKMAGRLGAEKVTVQNLQVIKY 60 Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 D + L+LVKG VPG KN +++++ S K Sbjct: 61 DVENSLLLVKGAVPGP-KNGYLVIKKSVKK 89 >gi|301500983|ref|YP_003795448.1| ribosomal protein L3 [Alveolata sp. CCMP3155] gi|300069529|gb|ADJ66636.1| ribosomal protein L3 [Chromerida sp. RM11] Length = 209 Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 1/93 (1%) Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168 V + G+ G GF+G + R+ F T G S HR+ GS G P RV+ KKM GR Sbjct: 111 VCIRGVGKGHGFAGVVSRYGFSRGPMTRG-SKHHRAPGSAGAGTFPSRVYPRKKMPGRWK 169 Query: 169 GNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKN 201 +R + + +D + L+ ++G VPG N Sbjct: 170 TSRRKYNRVRPLKLDVRHSLLWLQGSVPGKTGN 202 >gi|218672012|ref|ZP_03521681.1| 50S ribosomal protein L3 [Rhizobium etli GR56] Length = 74 Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 54/75 (72%), Positives = 62/75 (82%), Gaps = 1/75 (1%) Query: 141 SHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKK 200 SHRSHGSTG RQDPG+VFKNKKMAG MG RVT +NLEVVS D+ RGLIL+KG VPG+ K Sbjct: 1 SHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVVSTDEDRGLILIKGAVPGS-K 59 Query: 201 NSWILVRDSFKSAVN 215 +WI+VRD+ KSA Sbjct: 60 GAWIIVRDAVKSAAK 74 >gi|20093853|ref|NP_613700.1| 50S ribosomal protein L3P [Methanopyrus kandleri AV19] gi|42559662|sp|Q8TY90|RL3_METKA RecName: Full=50S ribosomal protein L3P gi|19886782|gb|AAM01630.1| Ribosomal protein L3 [Methanopyrus kandleri AV19] Length = 361 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 59/284 (20%), Positives = 86/284 (30%), Gaps = 75/284 (26%) Query: 4 GVVARKLGMTCVYNIE--------GR--RIPVTVLHLDNCQVVVHRT--LDKNGYMAV-- 49 G K GMT I+ G +PVT+L V R +GY V Sbjct: 45 GFAGYKAGMTHAIMIDDWPNSPTEGEEISVPVTILDAPPMYVAAIRAYAPTPDGYRCVTE 104 Query: 50 -------------------------------QVGAGEAKVKNVSKPMRGFFSSVNVS--- 75 V G + V + V Sbjct: 105 AWAEIPEELEMDRVFTVPKDGEAGDLDKIEELVDEGIVEEIRV--IVATQPKKAGVPKKK 162 Query: 76 PKKKLFEFRVQKDDDLLPVGSVF------SPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129 P + + + + F G++VDV+ +T GKGF G +KR Sbjct: 163 PDVMEYRIGGKDVRERFEYAVEILSEEIRAKDVFDEGEIVDVSAITKGKGFQGVVKRWGV 222 Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--DDKR- 186 R GS G P RV MAG++G ++ T N ++ + D + Sbjct: 223 TIQDRKTQRKQKGRHIGSIGPI-TPSRVRWTVPMAGQVGYHQRTEHNKRILKIGEDGEEV 281 Query: 187 --------------GLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 I++ G VPG KK I VR + + N Sbjct: 282 TPRGGFVNYGVVRGDYIMIHGTVPGPKKR-LIRVRPAVRPPKNA 324 >gi|161616466|ref|YP_001590431.1| hypothetical protein SPAB_04281 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161365830|gb|ABX69598.1| hypothetical protein SPAB_04281 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 72 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 40/73 (54%), Positives = 53/73 (72%), Gaps = 1/73 (1%) Query: 140 ISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAK 199 +SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV VD +R L+LVKG VPGA Sbjct: 1 MSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAERNLLLVKGGVPGA- 59 Query: 200 KNSWILVRDSFKS 212 ++V+ + K+ Sbjct: 60 TGCDLIVKPAVKA 72 >gi|84489708|ref|YP_447940.1| 50S ribosomal protein L3P [Methanosphaera stadtmanae DSM 3091] gi|109893523|sp|Q2NFV6|RL3_METST RecName: Full=50S ribosomal protein L3P gi|84373027|gb|ABC57297.1| 50S ribosomal protein L3P [Methanosphaera stadtmanae DSM 3091] Length = 337 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 57/284 (20%), Positives = 89/284 (31%), Gaps = 77/284 (27%) Query: 4 GVV---ARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGYMAVQ 50 G++ K+GMT V ++ R+ +PVT+L V+ R K Y Sbjct: 37 GLLAFAGYKVGMTHVTALDSRKGSPTENMELSVPVTILEAPPLVVLGIRAYTKTTYGLKT 96 Query: 51 VG-------------------------------------AGEAKVKNVSKPMRGFFSSVN 73 + E +V +KP Sbjct: 97 LTDVIANDNLDDELSRKISVPKFDDIEAKIEELRNKIDDIDEIRVLIHTKPKLTSVPKKK 156 Query: 74 ---VSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129 + + + + +G +P F G+ D T GKG G +KR Sbjct: 157 PEVLEFGLGGKSVEDKLEYAISILGKEITPQDVFQEGEYTDAIATTKGKGVQGPVKRFGV 216 Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK---- 185 S R GS G P R M G+MG ++ T N +++ + D+ Sbjct: 217 RIQYGKAARSGIERHVGSIGPW-TPNRTMWTVAMQGQMGYHKRTEYNKKLLKIGDESEVD 275 Query: 186 ---------------RGLILVKGCVPGAKKNSWIL---VRDSFK 211 ILVKG +PG K +L VR++ K Sbjct: 276 LINPDGGFVKYGFVKNNYILVKGSLPGPSKRLVVLRKGVRNASK 319 >gi|242052021|ref|XP_002455156.1| hypothetical protein SORBIDRAFT_03g005220 [Sorghum bicolor] gi|241927131|gb|EES00276.1| hypothetical protein SORBIDRAFT_03g005220 [Sorghum bicolor] Length = 144 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 46/69 (66%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61 R+GV+ K GM+ +++ G ++P+TVL +D+ V +T +K G+ A+Q+GAG+ K K++ Sbjct: 71 RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVTQVKTAEKEGFFALQLGAGQKKEKHL 130 Query: 62 SKPMRGFFS 70 KP G F Sbjct: 131 PKPEVGHFR 139 >gi|182418827|ref|ZP_02950092.1| 50S ribosomal protein L3 [Clostridium butyricum 5521] gi|182377324|gb|EDT74885.1| 50S ribosomal protein L3 [Clostridium butyricum 5521] Length = 77 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 2/79 (2%) Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKG 193 THG S HR+ GS G DP R FKNK+M G MG TV NL+VV V ++ LIL+KG Sbjct: 1 MTHG-SKFHRAPGSMGASSDPSRTFKNKRMPGHMGSVNTTVLNLQVVKVIAEKNLILIKG 59 Query: 194 CVPGAKKNSWILVRDSFKS 212 +PG K + + ++++ ++ Sbjct: 60 GIPGPNKGTVV-IKNTVRA 77 >gi|86154135|ref|ZP_01072334.1| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni HB93-13] gi|85842375|gb|EAQ59591.1| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni HB93-13] Length = 144 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 15/156 (9%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ I VT+L + N +V + G V G+A +K + Sbjct: 4 IVEKIGMSRTITNP--SIAVTLLRVVNAKVCEV----EGGKALVAYPKGKAS----NKCV 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G N+S + F + G + +++ V+ T G+G+SG MK Sbjct: 54 AGQQKKYNLSAEYNRFA---TLEVANTEAGD-LDETPLNEAKILKVSFNTKGRGYSGVMK 109 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 RHNF G A+HG S HR HGS G R+ PGRV Sbjct: 110 RHNFAGGPASHG-SRFHRRHGSIGNREWPGRVQPGM 144 >gi|307354323|ref|YP_003895374.1| 50S ribosomal protein L3 [Methanoplanus petrolearius DSM 11571] gi|307157556|gb|ADN36936.1| ribosomal protein L3 [Methanoplanus petrolearius DSM 11571] Length = 337 Score = 98.7 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 57/279 (20%), Positives = 93/279 (33%), Gaps = 72/279 (25%) Query: 7 ARKLGMTCVYNIE--------GR--RIPVTVLHLDNCQVVVHRTLDKNGY---------- 46 K+GMT V I+ G+ +PVTV+ + +V+ R + Y Sbjct: 44 GYKVGMTHVIMIDDHKNSPSEGKEISVPVTVIEIPPMKVIAIRAYTNDTYGRKAFAEVWS 103 Query: 47 --------MAVQVGAGEAKVKNVSKPMRGFFSS----------------VNVSPK-KKLF 81 A Q+ + K ++G V K +L Sbjct: 104 ENIDESISRATQIPKKHNAEEQKEKILKGIEDGFVTDIFAIMYTQPEQLTGVPKKVPELM 163 Query: 82 EFRVQK-------DDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLR 133 E R+ D + +G GQ +DVT +T GKG GA+KR + Sbjct: 164 EIRIAGGDLSTRLDFGISKLGEEVEIENVANAGQYIDVTAVTTGKGTQGAVKRWGIQVRK 223 Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--DDKR----- 186 H R G+ G P V G+MG + T N ++ + + + Sbjct: 224 RKHSRGKKKRHIGNLGPW-TPHHVRWQVPQMGQMGYQQRTEFNKRILRIGNNPEEINPDG 282 Query: 187 ----------GLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +L+KG +PG K I +R + + + Sbjct: 283 GFLHYGLVRGKYVLIKGSIPGPTKR-LIRIRPAIRQGEH 320 >gi|148642822|ref|YP_001273335.1| 50S ribosomal protein L3P [Methanobrevibacter smithii ATCC 35061] gi|222445053|ref|ZP_03607568.1| hypothetical protein METSMIALI_00670 [Methanobrevibacter smithii DSM 2375] gi|261350378|ref|ZP_05975795.1| ribosomal protein L3 [Methanobrevibacter smithii DSM 2374] gi|166233159|sp|A5UL89|RL3_METS3 RecName: Full=50S ribosomal protein L3P gi|148551839|gb|ABQ86967.1| ribosomal protein L3p [Methanobrevibacter smithii ATCC 35061] gi|222434618|gb|EEE41783.1| hypothetical protein METSMIALI_00670 [Methanobrevibacter smithii DSM 2375] gi|288861161|gb|EFC93459.1| ribosomal protein L3 [Methanobrevibacter smithii DSM 2374] Length = 336 Score = 98.7 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 57/278 (20%), Positives = 83/278 (29%), Gaps = 71/278 (25%) Query: 4 GVVARKLGMTC-VYNIEGRR---------IPVTVLHLDNCQVVVHRTLDK---------- 43 G+ K+GMT + + PVTVL + V+ R +K Sbjct: 40 GLAGYKVGMTHALVTDSDKNSPTNGMDVFTPVTVLEVPPVVVMGIRAYEKTSRGLKVITE 99 Query: 44 --------------------NGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEF 83 N A+ G K + V PKKK F Sbjct: 100 VLADNLDEELSRKISLPKEYNKSEAIAKIQGVLDKTEDIKVLVHTNPKVTSVPKKKPDIF 159 Query: 84 RVQKDDDLLP---------VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLR 133 +G+ GQ VD T GKGF G +KR Sbjct: 160 ECGIGGANPEEKLNTALELLGNEVKASDILNEGQFVDAIATTKGKGFQGVVKRWGIRIQY 219 Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV----------- 182 + R GS G P R AG+MG ++ T N +++ + Sbjct: 220 GKAVRAGKGRHVGSIGPW-TPSRTMWTVAQAGQMGYHKRTEFNKKILKIASADEVDQINP 278 Query: 183 --------DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 K +LVKG +PG K +++R + Sbjct: 279 DGGFVKYGLVKNDYVLVKGSLPGPSKR-LVILRQPIRP 315 >gi|312137075|ref|YP_004004412.1| lsu ribosomal protein l3p [Methanothermus fervidus DSM 2088] gi|311224794|gb|ADP77650.1| LSU ribosomal protein L3P [Methanothermus fervidus DSM 2088] Length = 333 Score = 98.7 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 58/281 (20%), Positives = 89/281 (31%), Gaps = 72/281 (25%) Query: 7 ARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNG---YMAVQVGA 53 K+GMT V I+ ++ PVT++ V+ R ++ V A Sbjct: 43 GYKVGMTHVMAIDNKKNSPTEGMEVFTPVTIIETPPLTVMGIRAYERTSRGLKTLTDVLA 102 Query: 54 GEAKV---KNVSKPMRGFFSSV-----------------------------NVSPKKKLF 81 + K + ++ P P+ Sbjct: 103 DDLKEDLERRINLPKNYDKDKALDKIEENKDYIEEVRVLVHTNPRLVTGVPKKKPEIFEC 162 Query: 82 EFRVQKDDDLLP-----VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRAT 135 + + L +G F+ G+ VD +T GKGF G +KR A Sbjct: 163 GLGGKDPQEKLEYALELLGKDVKISEIFSEGEYVDTIAVTKGKGFQGPVKRWGIKIQNAK 222 Query: 136 HGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL---------EVVSVDDK- 185 S R GS G P R AG+ G +R T N EV ++ K Sbjct: 223 TARSGKGRHIGSLGPW-TPSRTMWRVPQAGQTGYHRRTEYNKMIMKIGTSDEVEKINPKG 281 Query: 186 ---------RGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 +LVKG VPG K I++R + + V + Sbjct: 282 GFIRYGLVRNDYLLVKGSVPGPTKR-LIMLRKAIRPKVRQE 321 >gi|1644227|dbj|BAA11007.1| ribosomal protein L3 [Bacillus subtilis] Length = 60 Score = 97.9 bits (243), Expect = 9e-19, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 35/59 (59%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+Q+G + + K Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQLGFDDKREK 59 >gi|88603499|ref|YP_503677.1| 50S ribosomal protein L3P [Methanospirillum hungatei JF-1] gi|109893522|sp|Q2FU91|RL3_METHJ RecName: Full=50S ribosomal protein L3P gi|88188961|gb|ABD41958.1| LSU ribosomal protein L3P [Methanospirillum hungatei JF-1] Length = 337 Score = 97.9 bits (243), Expect = 9e-19, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 92/278 (33%), Gaps = 72/278 (25%) Query: 4 GVVARKLGMTCVYNIE--------GR--RIPVTVLHLDNCQVVVHRTLDKNGY------- 46 G K+GMT V ++ G+ +PVTV+ + + +V R + Y Sbjct: 41 GFAGYKVGMTHVIMVDDHAHSPNEGKDIMVPVTVIEVPDMRVAAIRVYRHDTYGNHVLTE 100 Query: 47 -MAVQVGAGEAKVKNVSKPMRGFFSSVNVS-----------------------------P 76 A ++ N+SK + + + P Sbjct: 101 VWADSFDKELSRRLNLSKNYKREEAEKKIREALEADKIVDVVALTYTRPSVLTGVPKKVP 160 Query: 77 KKKLFEFRVQKDDDLLP-----VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130 + +G F S F VGQ DVT +T GKG G +KR Sbjct: 161 DLMETRIDGGSMTERFEYGLSMLGKDFDIRSLFKVGQYTDVTAITKGKGTQGPVKRWGVH 220 Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD------- 183 + H R G+ G P V M G+MG ++ T N ++ + Sbjct: 221 LRKRKHSRGKKERHVGTLGPW-TPHHVRWQVPMMGQMGYHQRTEFNKRLLKIGEDGAEIT 279 Query: 184 DKRGLI----------LVKGCVPGAKKNSWILVRDSFK 211 + G I L+KG VPG K + +R + + Sbjct: 280 PEGGFINYGEVRARYVLIKGSVPGPSKR-LVRIRHAMR 316 >gi|268323275|emb|CBH36863.1| 50S ribosomal protein L3P [uncultured archaeon] Length = 315 Score = 97.9 bits (243), Expect = 9e-19, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 77/265 (29%), Gaps = 51/265 (19%) Query: 4 GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53 G K GMT + + IPVTV+ +V R Y V Sbjct: 40 GFAGYKAGMTHIILTDNVSHSMTKGMEIAIPVTVIETPPMRVEGFRLYKSTHYGKQTVTE 99 Query: 54 GEAKVKNV--------------------SKPMRGFFSSV-NVSPKKKLFEFRVQKDDDLL 92 + + K + G V + E Sbjct: 100 AYNDLSKIEELIKSNSTGLELRMISSTLPKAVNGVPKKKQEVMETQMGGEIGKDLKYAKE 159 Query: 93 PVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151 +G S F G VD T +T GKG G +KR A S R G+ G Sbjct: 160 MLGKEISAKDIFNEGDFVDATAVTKGKGTQGPVKRWGITIQNAKARRSGKGRHVGAIGGW 219 Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-----------------DDKRGLILVKGC 194 P RV G+ G + T N ++ + + +L+KG Sbjct: 220 -TPRRVRWRVPQLGQTGYQQRTEYNKRILKIGENGEEITPKGGFLNYGIVRNDYVLLKGS 278 Query: 195 VPGAKKNSWILVRDSFKSAVNCKGK 219 VPG KK + + + ++ Sbjct: 279 VPGPKKR-LVRLSRAIRAPPKLDAP 302 >gi|146302876|ref|YP_001190192.1| 50S ribosomal protein L3P [Metallosphaera sedula DSM 5348] gi|172046889|sp|A4YCW6|RL3_METS5 RecName: Full=50S ribosomal protein L3P gi|145701126|gb|ABP94268.1| LSU ribosomal protein L3P [Metallosphaera sedula DSM 5348] Length = 341 Score = 97.9 bits (243), Expect = 9e-19, Method: Composition-based stats. Identities = 60/267 (22%), Positives = 94/267 (35%), Gaps = 61/267 (22%) Query: 1 MRSGVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRT--LDKNGYMA 48 + G V K+GMT ++ I+ R +PVTVL V+ R L+ G + Sbjct: 41 VTLGFVGYKVGMTHIFMIDEDRSSSMFGKEIYVPVTVLETPPIYVLALRAYGLNNRGEHS 100 Query: 49 VQ------VG-AGE-----AKVKNVSKPMRGFFSS------------------------- 71 V +G G+ + + K + Sbjct: 101 VMGEVWGDLGDFGKFITRRIRGLKIDKEKKEHQLKDIESNLESVSYFRLLVSTQPHLIPA 160 Query: 72 -VNVSPKKKLFEFRVQKDDDLLP-----VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAM 124 +P + + L +G+ S F GQL+D+ G+T G GF G + Sbjct: 161 LGKKTPDIVEVQIGGGNTKNQLEYGLKLLGNTLSVRDVFKEGQLMDIIGVTKGHGFQGVI 220 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184 KR+ L H R G+ G G+MG +R T N ++ + D Sbjct: 221 KRYGVQELPRWHKHRKGSRKVGTKGPS---LGTPSYVPQPGQMGFHRRTEYNKRILKISD 277 Query: 185 KRGLILVKGCVP--GAKKNSWILVRDS 209 LI KG G KN+++LV+ S Sbjct: 278 DTKLINPKGGFVRYGLVKNTYLLVQGS 304 >gi|255017639|ref|ZP_05289765.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL F2-515] Length = 79 Score = 97.5 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 38/81 (46%), Positives = 54/81 (66%), Gaps = 3/81 (3%) Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191 HG S HR GS G P RVFKNK + GRMGG ++T++NLE+V VD ++ ++LV Sbjct: 1 GPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQITIQNLEIVKVDVEKNVLLV 58 Query: 192 KGCVPGAKKNSWILVRDSFKS 212 KG VPGAKK + + ++ + K+ Sbjct: 59 KGNVPGAKK-ALVQIKTATKA 78 >gi|94993442|ref|YP_601540.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10750] gi|94546950|gb|ABF36996.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10750] Length = 78 Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 46/80 (57%), Positives = 57/80 (71%), Gaps = 3/80 (3%) Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKG 193 HG S HR GS G P RVFKNK++AGRMGGNRVTV+NLE+V V ++ +ILVKG Sbjct: 1 MAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIVQVIPEKNVILVKG 58 Query: 194 CVPGAKKNSWILVRDSFKSA 213 VPGAKK S I ++ + K+A Sbjct: 59 NVPGAKK-SLITIKSAVKAA 77 >gi|126460189|ref|YP_001056467.1| 50S ribosomal protein L3P [Pyrobaculum calidifontis JCM 11548] gi|212288409|sp|A3MWI4|RL3_PYRCJ RecName: Full=50S ribosomal protein L3P gi|126249910|gb|ABO09001.1| LSU ribosomal protein L3P [Pyrobaculum calidifontis JCM 11548] Length = 338 Score = 96.4 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 43/140 (30%), Positives = 63/140 (45%), Gaps = 22/140 (15%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 FT GQLVDV +T GKG+ G +KR L H HR G+ G Q P +F Sbjct: 193 DVFTPGQLVDVIAVTKGKGYQGVVKRFGVTILPRWHKHRKGHRRTGTIGP-QAPALMFTQ 251 Query: 161 KKMAGRMGGNRVTVKNLEVVSVD------------DKRGL-----ILVKGCVPGAKKNSW 203 + G+MG ++ T N ++ + G+ IL++G VPGA+K Sbjct: 252 PR-PGQMGFHQRTEYNKRILKIGDNGAEITPKSGFPHYGVIKGPYILLQGSVPGARKRLV 310 Query: 204 IL---VRDSFKSAVNCKGKV 220 +L VR K+ + +V Sbjct: 311 VLRYPVRPPKKAPPAAEPQV 330 >gi|303244465|ref|ZP_07330800.1| ribosomal protein L3 [Methanothermococcus okinawensis IH1] gi|302485163|gb|EFL48092.1| ribosomal protein L3 [Methanothermococcus okinawensis IH1] Length = 333 Score = 96.4 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 39/136 (28%), Positives = 56/136 (41%), Gaps = 20/136 (14%) Query: 94 VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G S FT G+ +D +T GKGF G +KR H R GS G Sbjct: 178 LGKTLSINDVFTDGEFIDTIAITKGKGFQGPVKRWGIKIQFGKHRNKGVGRHTGSIGPW- 236 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-----------------DDKRGLILVKGCV 195 P RV MAG+MG ++ T N ++ + D K +LVKG V Sbjct: 237 TPKRVMWTVPMAGQMGYHQRTEYNKRILKIGNNGEEIVPKGGFLHYGDVKNNYVLVKGSV 296 Query: 196 PGAKKNSWILVRDSFK 211 G K +++R + + Sbjct: 297 QGPAKR-MVVLRGAIR 311 >gi|207108256|ref|ZP_03242418.1| 50S ribosomal protein L3 [Helicobacter pylori HPKX_438_CA4C1] Length = 128 Score = 96.4 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 2/76 (2%) Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G MKR NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N EV+S Sbjct: 44 GVMKRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLS 101 Query: 182 VDDKRGLILVKGCVPG 197 D + ++++KG V G Sbjct: 102 FDKESMVLVLKGSVAG 117 >gi|297619637|ref|YP_003707742.1| ribosomal protein L3 [Methanococcus voltae A3] gi|297378614|gb|ADI36769.1| ribosomal protein L3 [Methanococcus voltae A3] Length = 333 Score = 96.0 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 20/139 (14%) Query: 94 VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G S F G+++D +T GKGF G++KR H R GS G + Sbjct: 178 LGQKLSINDVFEAGEIIDTVAVTKGKGFQGSVKRWGIKIQFGKHQRKGVGRHTGSIGPWR 237 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK-----------------RGLILVKGCV 195 P RV + + G+MG ++ T N + + + G +LVKG V Sbjct: 238 -PRRVMWSVPLPGQMGFHQRTEYNKRIFKIGAEGTEVTPKGGFLNYGVLKNGYVLVKGTV 296 Query: 196 PGAKKNSWILVRDSFKSAV 214 G K +++R + ++ V Sbjct: 297 QGPAKR-LVMIRGAIRAPV 314 >gi|18313001|ref|NP_559668.1| 50S ribosomal protein L3P [Pyrobaculum aerophilum str. IM2] gi|42559672|sp|Q8ZW52|RL3_PYRAE RecName: Full=50S ribosomal protein L3P gi|18160502|gb|AAL63850.1| ribosomal protein L3 [Pyrobaculum aerophilum str. IM2] Length = 338 Score = 96.0 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 24/141 (17%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 FT GQLVDV +T GKG+ G +KR L H HR G+ G Q P +F Sbjct: 193 DVFTPGQLVDVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIGP-QAPAVMFTQ 251 Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRG------------------LILVKGCVPGAKKNS 202 + G+MG ++ T N ++ + + G IL++G VPGA+K Sbjct: 252 PR-PGQMGFHQRTEYNKRLLKI-GENGAEITPKSGFPHYGVVKGPYILIQGSVPGARKRL 309 Query: 203 WIL---VRDSFKSAVNCKGKV 220 +L VR K+ + +V Sbjct: 310 VVLRHPVRPPRKAPPAAEPQV 330 >gi|296109263|ref|YP_003616212.1| ribosomal protein L3 [Methanocaldococcus infernus ME] gi|295434077|gb|ADG13248.1| ribosomal protein L3 [Methanocaldococcus infernus ME] Length = 333 Score = 96.0 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 20/137 (14%) Query: 94 VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G + F G+LVD G+T GKGF G +KR H R GS G Q Sbjct: 178 LGKQLNITDVFQEGELVDTIGVTKGKGFQGVVKRWGVKIQPRKHRRQGVGRHVGSIGPWQ 237 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCV 195 P + G+MG ++ T N ++ + + K +++KG V Sbjct: 238 -PKMIMWTVPRPGQMGYHQRTEYNKRILKIGNNGEEITPEGGFPHYGVIKNNYVILKGSV 296 Query: 196 PGAKKNSWILVRDSFKS 212 G +K I++R + + Sbjct: 297 QGPQKR-LIVLRSAIRP 312 >gi|169929925|gb|ACB05634.1| 50S ribosomal protein L3 [Leptospira santarosai serovar Tropica] gi|169929928|gb|ACB05636.1| 50S ribosomal protein L3 [Leptospira santarosai serovar Shermani] Length = 93 Score = 96.0 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 2/92 (2%) Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 + G+G+ G +KR + S HR GS G P RVFK K+ GR G + T+ Sbjct: 1 SKGRGYQGVVKR-HGHAGGPGGHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQQTTI 59 Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206 +NL+VV +++++ L+ V G +PG + N+ I + Sbjct: 60 RNLKVVRINEEKNLLFVSGSIPGTE-NTVITI 90 >gi|119873281|ref|YP_931288.1| 50S ribosomal protein L3P [Pyrobaculum islandicum DSM 4184] gi|212288410|sp|A1RVG3|RL3_PYRIL RecName: Full=50S ribosomal protein L3P gi|119674689|gb|ABL88945.1| LSU ribosomal protein L3P [Pyrobaculum islandicum DSM 4184] Length = 342 Score = 95.2 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 22/140 (15%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 FT GQLVDV +T GKG+ G +KR L H HR G+ G Q P +F Sbjct: 197 EVFTAGQLVDVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIGP-QAPAVMFTQ 255 Query: 161 KKMAGRMGGNRVTVKNLEVVSVD-----------------DKRGLILVKGCVPGAKKNSW 203 + G+MG ++ T N ++ + K IL++G VPGA+K Sbjct: 256 PR-PGQMGFHQRTEYNKRIIKIGDNGAEITPKSGFLHYGVVKGPYILIQGTVPGARKRLV 314 Query: 204 IL---VRDSFKSAVNCKGKV 220 +L VR K+ + +V Sbjct: 315 VLRYPVRPPKKAPPAAEPQV 334 >gi|198477055|ref|XP_002136783.1| GA27952 [Drosophila pseudoobscura pseudoobscura] gi|198145102|gb|EDY71806.1| GA27952 [Drosophila pseudoobscura pseudoobscura] Length = 229 Score = 95.2 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 14/127 (11%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-------------NGYMA 48 R GV+ARK+G ++ G+++ T+L + + V+ + ++ N Y Sbjct: 104 RCGVIARKIGQYPLWLKNGKKVRTTLLQIADNHVIKYMPHEECRPQKNLSRVHNSNQYGC 163 Query: 49 VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQL 108 + VGA ++K G F V PKK + F V D L P G+ + S F VG+ Sbjct: 164 LLVGAESTNPSMLTKEYCGIFRDAGVVPKKNIMRFMVSPDGALAP-GTPLNISRFRVGEY 222 Query: 109 VDVTGMT 115 VDV G T Sbjct: 223 VDVRGKT 229 >gi|169929931|gb|ACB05638.1| 50S ribosomal protein L3 [Leptospira noguchii serovar Proechymis] gi|169929934|gb|ACB05640.1| 50S ribosomal protein L3 [Leptospira noguchii serovar Panama] Length = 93 Score = 95.2 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 2/92 (2%) Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 + G+G+ G +KR + S HR GS G P RVFK K+ GR G + TV Sbjct: 1 SKGRGYQGVVKR-HGHAGGPGAHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQQTTV 59 Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206 +NL+VV +++++ L+ V G VPG N+ I + Sbjct: 60 RNLKVVRINEEKNLLFVSGAVPGTA-NTVITI 90 >gi|119719148|ref|YP_919643.1| 50S ribosomal protein L3P [Thermofilum pendens Hrk 5] gi|119524268|gb|ABL77640.1| LSU ribosomal protein L3P [Thermofilum pendens Hrk 5] Length = 334 Score = 95.2 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 92/278 (33%), Gaps = 72/278 (25%) Query: 4 GVVARKLGMTCV----------YNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53 G K+GM V + + R TV+ + +VV R +K Y + Sbjct: 39 GFAGYKVGMLHVIGVEMNKNSPFYGQERFYAATVIEVPPLKVVAVRVYEKTPYGKKTLCE 98 Query: 54 GEAK-------------------VKNVSKPMRGFFSSVNVSP--------------KKKL 80 AK + + K V K +L Sbjct: 99 VWAKDLPKDLERVFPLPKDQSYHEEQLKKLEEVKSRVSEVRVLAATQPRLSGLGKKKPEL 158 Query: 81 FEFRVQKDDD------LLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLR 133 E V + L +G + F G +DV +T GKGF G++KR + Sbjct: 159 IEIAVGGPPEKALSLALEKLGKDLTISDVFKEGDYIDVIAVTKGKGFQGSVKRFGVEEMP 218 Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-DDK------- 185 H H GS G Q P +F G++G ++ T N ++ V D + Sbjct: 219 RWHKHRKGHSRIGSVGP-QKPAIMF-YTPFPGQLGFHQRTEYNKRILKVGDAESLKEINP 276 Query: 186 -----------RGLILVKGCVPGAKKNSWILVRDSFKS 212 I+V+G VPGA K + +R + ++ Sbjct: 277 PGGWPHYGLVRSQFIIVEGSVPGAVKR-LVRLRHAIRA 313 >gi|256810689|ref|YP_003128058.1| ribosomal protein L3 [Methanocaldococcus fervens AG86] gi|256793889|gb|ACV24558.1| ribosomal protein L3 [Methanocaldococcus fervens AG86] Length = 335 Score = 95.2 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 57/271 (21%), Positives = 88/271 (32%), Gaps = 69/271 (25%) Query: 9 KLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG---- 54 K GMT + E G+ + PVTVL V R +N + Sbjct: 46 KAGMTHAFIKEDNPKSPNAGQEVFTPVTVLEAPPINVCAIRVYGRNERNYLTTLTEVWAD 105 Query: 55 ------EAKVKNVSKPMRGFFSSVNV------------------------SPKKKLFEFR 84 E K+K K R + P+ Sbjct: 106 NLDKELERKIKLPKKEERKTVEDLEAIKDKIEDVRVLVHTNPKLTCLPKKKPEILEIRIG 165 Query: 85 VQKDDDLLP-----VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGV 138 + ++ L +G + F G+LVD G+T GKGF G +KR H Sbjct: 166 GKDIEERLNYAKEILGKQLNITDVFQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHAR 225 Query: 139 SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD-------------- 184 R GS G Q P V M G+MG ++ T N ++ + + Sbjct: 226 KGVGRHVGSIGPWQ-PKMVMWTVPMPGQMGYHQRTEYNKRILKIGNNGEEITPKGGFLHY 284 Query: 185 ---KRGLILVKGCVPGAKKNSWILVRDSFKS 212 + +++KG V G K I++R + + Sbjct: 285 GVIRNNYVVLKGSVQGPAKR-LIVLRSAIRP 314 >gi|169929919|gb|ACB05630.1| 50S ribosomal protein L3 [Leptospira borgpetersenii serovar Hardjo-bovis] gi|169929922|gb|ACB05632.1| 50S ribosomal protein L3 [Leptospira borgpetersenii serovar Hardjo-bovis] gi|169929955|gb|ACB05654.1| 50S ribosomal protein L3 [Leptospira meyeri serovar Ranarum] Length = 93 Score = 94.8 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 2/92 (2%) Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 + G+GF G +KR + S HR GS G P RVFK K+ GR G + TV Sbjct: 1 SKGRGFQGVVKR-HGHAGGPGGHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQQTTV 59 Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206 +NL+VV +++++ L+ V G VPG N+ I + Sbjct: 60 RNLKVVRINEEKNLVFVSGAVPG-TTNTVITI 90 >gi|325958531|ref|YP_004289997.1| 50S ribosomal protein L3 [Methanobacterium sp. AL-21] gi|325329963|gb|ADZ09025.1| ribosomal protein L3 [Methanobacterium sp. AL-21] Length = 337 Score = 94.8 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 52/276 (18%), Positives = 92/276 (33%), Gaps = 72/276 (26%) Query: 7 ARKLGMTCVYNIEGRR----------IPVTVLHLDNCQV------------------VVH 38 K+GMT V ++ + PVT+L V V+ Sbjct: 43 GYKVGMTHVTMLDNVKNSPTSGMEVSSPVTILETPPVVVMGVRAYRKDTRGLKTLNDVMA 102 Query: 39 RTLDKNGYMAVQVGAG------------------EAKVKNVSKPMR--GFFSSV--NVSP 76 + LD++ + + + +V +KP G + Sbjct: 103 KDLDEDLTRKITLPKDYDVEAKLDEMKEQLDEVEDIRVLLHTKPRLASGIPKKKPEIIEC 162 Query: 77 KKKLFEFRVQKDDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRAT 135 + + +G + F+ G+ VD +T GKGF G +KR Sbjct: 163 GIGGKSVEDKFEFARSLLGKEVNPADSFSDGEHVDTIAVTKGKGFQGPVKRFGVRIQYGK 222 Query: 136 HGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK---------- 185 S R GS G P R MAG+MG ++ T N +++ + D+ Sbjct: 223 AARSSKARHVGSIGPW-TPARTMWTVAMAGQMGYHKRTEFNKKILRIADESQVDEVNPKG 281 Query: 186 ---------RGLILVKGCVPGAKKNSWILVRDSFKS 212 G +++KG +PG K +++R + + Sbjct: 282 GFVKYGLIKNGYVMIKGSIPGPSKR-LVILRKAVRP 316 >gi|13310854|gb|AAK18645.1|AF250390_3 ribosomal protein L3 [Candidatus Carsonella ruddii] Length = 136 Score = 94.8 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 38/101 (37%), Positives = 60/101 (59%), Gaps = 4/101 (3%) Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164 + + ++ ++ GKGF+G +K+ NF +HG S+S+R+ GS G QDPGRVFK KKM Sbjct: 36 EFKTLKISSISKGKGFAGVIKKWNFKTKDKSHGCSLSYRTLGSVGQCQDPGRVFKGKKMP 95 Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWIL 205 G+MG ++T V K + +K +PG+ KN ++ Sbjct: 96 GKMGNKKITFF---VNIFLRKNDIFFIKTIIPGS-KNDYLY 132 >gi|169929907|gb|ACB05622.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Lai] gi|169929910|gb|ACB05624.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Icterohaemorrhagiae] gi|169929913|gb|ACB05626.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Hardjo-prajitno] gi|169929916|gb|ACB05628.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Malaya] gi|169929943|gb|ACB05646.1| 50S ribosomal protein L3 [Leptospira kirschneri serovar Mozdok] gi|169929946|gb|ACB05648.1| 50S ribosomal protein L3 [Leptospira kirschneri serovar Bim] Length = 93 Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 2/92 (2%) Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 + G+G+ G +KR + S HR GS G P RVFK K+ GR G + TV Sbjct: 1 SKGRGYQGVVKR-HGHAGGPGAHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQKTTV 59 Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206 +NL+VV +++++ L+ V G VPG N+ I + Sbjct: 60 RNLKVVRINEEKNLLFVSGAVPGTA-NTVITI 90 >gi|330835825|ref|YP_004410553.1| 50S ribosomal protein L3P [Metallosphaera cuprina Ar-4] gi|329567964|gb|AEB96069.1| 50S ribosomal protein L3P [Metallosphaera cuprina Ar-4] Length = 341 Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 61/270 (22%), Positives = 93/270 (34%), Gaps = 61/270 (22%) Query: 4 GVVARKLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHRTLDKNGY-MAVQVG 52 G + K GMT VY I+ G+ I PVTV+ V+ R +G ++ +G Sbjct: 44 GFIGYKAGMTHVYMIDEDKSSSMYGKEIYMPVTVIETPPILVMSLRAYAIDGKGESMSIG 103 Query: 53 -------------AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFR--VQKDDDLLP---- 93 K + K S + FR V L+P Sbjct: 104 EVWGDLSDKSKYITRRIKSLKIQKEKTEQQLKKIESNLDNISFFRLLVSTQPYLIPSLGK 163 Query: 94 -------------------------VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRH 127 +G+ S F GQL+D+ G+T G GF G +KR+ Sbjct: 164 KTPDIAEIQIGGGNPKAQLELGLKLLGNTVSVRDVFNEGQLIDILGVTTGYGFQGVIKRY 223 Query: 128 NFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRG 187 L H R G+ G G+MG +R T N ++ + D+ Sbjct: 224 GVQELPRWHKHRKGSRKVGTKGPS---LGTPSYVPQPGQMGYHRRTEYNKRILRISDEIN 280 Query: 188 LILVKGCVP--GAKKNSWILVRDSFKSAVN 215 I KG G +N+++LV+ S + Sbjct: 281 QINPKGGFVRYGLVRNTYLLVQGSTIGPIK 310 >gi|14600545|ref|NP_147062.1| 50S ribosomal protein L3P [Aeropyrum pernix K1] gi|6685859|sp|Q9YFM2|RL3_AERPE RecName: Full=50S ribosomal protein L3P gi|5103618|dbj|BAA79139.1| 50S ribosomal protein L3P [Aeropyrum pernix K1] Length = 344 Score = 94.1 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 54/279 (19%), Positives = 83/279 (29%), Gaps = 75/279 (26%) Query: 6 VARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKN--------GYM 47 + + GMT V+ ++ R +PVT++ V R + G Sbjct: 46 LGYRAGMTHVFMVDDRPGRPTSGKEIFVPVTIVETPPMFVAAVRLYGYDPNRGRYSLGEA 105 Query: 48 AVQ-----------VGAGEAKVKNVSKPMRGFFSSVN-------VSPKKKLFEFRVQKDD 89 Q G + K + PK + + D Sbjct: 106 WAQPPPELELQRRISTLGSFDTDKMLKSLEERLDKAEDVRLIAASQPKLAGGLSKKKPDL 165 Query: 90 DLLPVGSVFSP------------------SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 + VG V F GQLVDV +T GKGF G +KR Sbjct: 166 LEIKVGGVSDVTKLFDYAKDVLGNLIAVNDVFEEGQLVDVIAVTKGKGFQGVIKRWGVKE 225 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK------ 185 L H R G R F AG+ G +R T N ++ +DD Sbjct: 226 LPRWHKHRKGSRR---IGARSHGRSTFWETPQAGQTGFHRRTEYNKRILMIDDDGYKVTP 282 Query: 186 -----------RGLILVKGCVPGAKKNSWILVRDSFKSA 213 +++ G +PG K ++ R + + Sbjct: 283 AGGFLRYGVVRSTFVMLSGSIPGTPKRPIVM-RWAIRPP 320 >gi|169929949|gb|ACB05650.1| 50S ribosomal protein L3 [Leptospira alexanderi serovar Mengla] gi|169929952|gb|ACB05652.1| 50S ribosomal protein L3 [Leptospira alexanderi serovar Manzhuang] Length = 93 Score = 93.7 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 2/92 (2%) Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 + G+GF G +KR + S HR GS G P RVFK K+ GR G + TV Sbjct: 1 SKGRGFQGVVKR-HGHAGGPGGHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSLQTTV 59 Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206 +NL+VV +++++ L+ V G VPG N+ I + Sbjct: 60 RNLKVVRINEEKNLVFVSGSVPGTA-NTVITI 90 >gi|169929937|gb|ACB05642.1| 50S ribosomal protein L3 [Leptospira weilii serovar Sarmin] gi|169929940|gb|ACB05644.1| 50S ribosomal protein L3 [Leptospira weilii serovar Celledoni] Length = 93 Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 2/92 (2%) Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 + G+GF G +KR + S HR GS G P RVFK K+ GR G + TV Sbjct: 1 SKGRGFQGVVKR-HGHAGGPGGHGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSLQTTV 59 Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206 +NL+VV +++++ L+ V G VPG N+ I + Sbjct: 60 RNLKVVRINEEKNLVFVSGAVPGTA-NTVITI 90 >gi|116335057|ref|YP_802552.1| ribosomal protein L3 [Candidatus Carsonella ruddii PV] gi|13272299|gb|AAK17082.1|AF274444_12 ribosomal protein L3 [Candidatus Carsonella ruddii] gi|116235338|dbj|BAF35186.1| ribosomal protein L3 [Candidatus Carsonella ruddii PV] Length = 136 Score = 92.9 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 39/100 (39%), Positives = 60/100 (60%), Gaps = 4/100 (4%) Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166 + + + ++ GKGF+G +K+ NF +HG S+S+R+ GS G QDPGRVFK KKM G+ Sbjct: 38 KTLKIISISKGKGFAGVIKKWNFKTKDKSHGCSLSYRTLGSVGQCQDPGRVFKGKKMPGK 97 Query: 167 MGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206 MG + T V K+ + +K +PG+ KN ++ V Sbjct: 98 MGNKKNTFF---VDVFLRKKNIFFIKKIIPGS-KNDYLYV 133 >gi|146319921|ref|YP_001199632.1| ribosomal protein L3 [Streptococcus suis 98HAH33] gi|145690727|gb|ABP91232.1| Ribosomal protein L3 [Streptococcus suis 98HAH33] Length = 78 Score = 92.9 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 43/80 (53%), Positives = 54/80 (67%), Gaps = 3/80 (3%) Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKG 193 HG S HR GS G P RVFK K +AGRMGGNRVT++NLEVV V ++ +IL+KG Sbjct: 1 MAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGNRVTIQNLEVVQVVPEKNVILIKG 58 Query: 194 CVPGAKKNSWILVRDSFKSA 213 VPGAKK S I ++ + K+ Sbjct: 59 NVPGAKK-SLITIKSAVKAG 77 >gi|45359106|ref|NP_988663.1| 50S ribosomal protein L3P [Methanococcus maripaludis S2] gi|74553576|sp|Q6LX10|RL3_METMP RecName: Full=50S ribosomal protein L3P gi|45047981|emb|CAF31099.1| LSU Ribosomal protein L3P [Methanococcus maripaludis S2] Length = 334 Score = 92.5 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 3/117 (2%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F G+++D +T GKGF G++KR H R GS G + P RV Sbjct: 187 DVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGPWR-PRRVMWT 245 Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDSFKSAVN 215 + G+MG ++ T N ++ + + I KG GA KN +++V+ + + Sbjct: 246 VPLPGQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGAVKNGYVVVKGTVQGPAK 302 >gi|20089942|ref|NP_616017.1| 50S ribosomal protein L3P [Methanosarcina acetivorans C2A] gi|42559661|sp|Q8TRU7|RL3_METAC RecName: Full=50S ribosomal protein L3P gi|19914903|gb|AAM04497.1| ribosomal protein L3p [Methanosarcina acetivorans C2A] Length = 337 Score = 92.1 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 62/285 (21%), Positives = 101/285 (35%), Gaps = 72/285 (25%) Query: 7 ARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKN--GYMAVQ-VGA 53 K+GMT V ++ + +PVTV+ +V R ++ G A+ V A Sbjct: 44 GYKVGMTHVIMVDDTKNSLTQGMEISVPVTVIETPAIRVAAIRAYAEDSTGEKAIAEVWA 103 Query: 54 GEAKV---KNVSKPMRGFFSSVNVSPKKKLFEFRVQK----------------------- 87 + + + P G + + K + E RV Sbjct: 104 ADLDPELKRRIPIPAAGNQAEALENIGKLIEEGRVSDVRAVIYTLPKSLTGVPKKVPDIM 163 Query: 88 -------------DDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLR 133 + +G++ S F G LVD +TIGKG G +KR ++ Sbjct: 164 ESGISARDLGTKFEYSKTILGTLVSVTDVFKNGTLVDTAAITIGKGTQGPVKRWGIQLMK 223 Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--DDKR----- 186 H S R G+ G +P RV G+MG ++ T N ++ + D + Sbjct: 224 GKHSRQGSLRQVGTLGAF-NPSRVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEEVTPEG 282 Query: 187 ----------GLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 IL+KG VPG K I +RD ++ G+ + Sbjct: 283 GFINYGLVRGDYILIKGSVPGPSKR-LIRLRDPIRAKKADLGEPN 326 >gi|327311641|ref|YP_004338538.1| 50S ribosomal protein L3P [Thermoproteus uzoniensis 768-20] gi|326948120|gb|AEA13226.1| 50S ribosomal protein L3P [Thermoproteus uzoniensis 768-20] Length = 337 Score = 92.1 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 22/136 (16%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F+ GQLVDV +T GKG+ G +KR L H HR G+ G Q P +F Sbjct: 194 DVFSAGQLVDVLAITRGKGWQGVIKRFGVKILPRWHKHRKGHRRTGTIGP-QSPALMFTQ 252 Query: 161 KKMAGRMGGNRVTVKNLEVVSVD-----------------DKRGLILVKGCVPGAKKNSW 203 + G+MG ++ T N ++ + K +++ G VPG +K Sbjct: 253 PR-PGQMGFHQRTEYNKRILKIGNNPAEINPKGGWPHYGLVKSDFLVLSGSVPGVQKRLV 311 Query: 204 IL---VRDSFKSAVNC 216 +L VR K+ + Sbjct: 312 VLRHPVRPPPKAPTSA 327 >gi|159905511|ref|YP_001549173.1| 50S ribosomal protein L3P [Methanococcus maripaludis C6] gi|226730533|sp|A9A9B8|RL3_METM6 RecName: Full=50S ribosomal protein L3P gi|159887004|gb|ABX01941.1| ribosomal protein L3 [Methanococcus maripaludis C6] Length = 334 Score = 92.1 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 3/117 (2%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F G+++D +T GKGF G++KR H R GS G + P RV Sbjct: 187 DVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGPWR-PRRVMWT 245 Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDSFKSAVN 215 + G+MG ++ T N ++ + + I KG GA KN +++V+ + + Sbjct: 246 VPLPGQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGAVKNGYVVVKGTVQGPAK 302 >gi|150402715|ref|YP_001330009.1| 50S ribosomal protein L3P [Methanococcus maripaludis C7] gi|166233157|sp|A6VHD2|RL3_METM7 RecName: Full=50S ribosomal protein L3P gi|150033745|gb|ABR65858.1| ribosomal protein L3 [Methanococcus maripaludis C7] Length = 334 Score = 92.1 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 3/117 (2%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F G+++D +T GKGF G++KR H R GS G + P RV Sbjct: 187 DVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGPWR-PRRVMWT 245 Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDSFKSAVN 215 + G+MG ++ T N ++ + + I KG GA KN +++V+ + + Sbjct: 246 VPLPGQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGAVKNGYVVVKGTVQGPAK 302 >gi|219851107|ref|YP_002465539.1| 50S ribosomal protein L3P [Methanosphaerula palustris E1-9c] gi|254803682|sp|B8GKD3|RL3_METPE RecName: Full=50S ribosomal protein L3P gi|219545366|gb|ACL15816.1| ribosomal protein L3 [Methanosphaerula palustris E1-9c] Length = 337 Score = 91.8 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 51/279 (18%), Positives = 89/279 (31%), Gaps = 72/279 (25%) Query: 7 ARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHR--TLDKNGYMAV----- 49 K+GMT V ++ + +PVT++ + +V R T D G A+ Sbjct: 44 GYKVGMTHVIMVDDHKNSPTEGKDIMVPVTIIEIPPMKVAAIRAYTADTYGKRALTEVWT 103 Query: 50 -QVGAGEAKVKNVSK---PMRGFFSSVNVSPKKKLFEFR----------------VQKDD 89 Q+ + + K GF + + E V + Sbjct: 104 EQLSTLLGRRITLPKKYSEEAGFKALSEAVAAGTVTELHALMYTQPDTLTGVPKKVPELM 163 Query: 90 DLLPVGSVFS----------------PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLR 133 ++ G G+ DVT +T GKG G +KR + Sbjct: 164 EVCIGGGTLEQKVEFAQSIIGNEVNLADVIGAGEYADVTAITTGKGTQGPVKRWGIMLRK 223 Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD--------- 184 H R G+ G +P V G+MG + T N ++ + + Sbjct: 224 RKHSRGGKKRHIGNLGPW-NPHHVRWQVPQMGQMGYQQRTDFNKRILKIGENGTDITPAG 282 Query: 185 --------KRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 + +++KG VPG K I +R + + + Sbjct: 283 GFLHYGLLRNPYVMIKGSVPGPVKR-LIRIRPAVRKGEH 320 >gi|261403779|ref|YP_003248003.1| ribosomal protein L3 [Methanocaldococcus vulcanius M7] gi|261370772|gb|ACX73521.1| ribosomal protein L3 [Methanocaldococcus vulcanius M7] Length = 335 Score = 91.8 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 35/137 (25%), Positives = 55/137 (40%), Gaps = 20/137 (14%) Query: 94 VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G + F G+L D G+T GKGF G +KR H R GS G Q Sbjct: 180 LGKQLNITDVFQEGELADTIGITKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQ 239 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCV 195 P + M G+MG ++ T N ++ + + K +++KG V Sbjct: 240 -PKMIMWTVPMPGQMGYHQRTEYNKRILKIGNNGEEITPKGGFLHYGVIKNNYVVLKGSV 298 Query: 196 PGAKKNSWILVRDSFKS 212 G K I++R + + Sbjct: 299 QGPAKR-LIVLRRAIRP 314 >gi|124028157|ref|YP_001013477.1| 50S ribosomal protein L3P [Hyperthermus butylicus DSM 5456] gi|123978851|gb|ABM81132.1| 50S ribosomal protein L3P [Hyperthermus butylicus DSM 5456] Length = 319 Score = 91.8 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 40/147 (27%), Positives = 54/147 (36%), Gaps = 26/147 (17%) Query: 94 VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRS-HGSTGCR 151 +GS F GQ VDV +T GKGF G +KR L H RS G+ G Sbjct: 164 LGSELKVSDVFREGQFVDVIAVTKGKGFQGVIKRFGVKELPRWHKHRKGSRSGPGTRGPA 223 Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL------------------ILVKG 193 + G+MG +R T N ++ + GL IL+ G Sbjct: 224 TSFS--WSEVPQPGQMGFHRRTEYNKRILKI-GDNGLEITPAGGFLHYGIVRSTYILLAG 280 Query: 194 CVPGAKKNSWIL---VRDSFKSAVNCK 217 +PG K +L VR + K Sbjct: 281 SIPGTPKRPIVLRHPVRPRWMPEAPPK 307 Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 13/52 (25%) Query: 6 VARKLGMTCVY---NIEGRR-------IPVTVLHLDNCQVVVHRTLDKNGYM 47 +A K+GMT VY + G +PVTVL V R GY Sbjct: 18 LAYKVGMTHVYVIDDEPGSITHGREIFMPVTVLEAPPMVVTAVRV---YGYD 66 >gi|134045079|ref|YP_001096565.1| 50S ribosomal protein L3P [Methanococcus maripaludis C5] gi|166233156|sp|A4FVY2|RL3_METM5 RecName: Full=50S ribosomal protein L3P gi|132662704|gb|ABO34350.1| LSU ribosomal protein L3P [Methanococcus maripaludis C5] Length = 334 Score = 91.4 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 3/117 (2%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F G+++D +T GKGF G++KR H R GS G + P RV Sbjct: 187 DVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGPWR-PRRVMWT 245 Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDSFKSAVN 215 + G+MG ++ T N ++ + + I KG GA KN +++V+ + + Sbjct: 246 VPLPGQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGAVKNGYVVVKGTVQGPAK 302 >gi|313233372|emb|CBY24487.1| unnamed protein product [Oikopleura dioica] Length = 303 Score = 91.0 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 3/120 (2%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTL-DKNGYM-AVQVGAGEAKVK 59 R+G+V +K+G+ ++ +G R+ T+L + NC V+ + + NG AV VGAG K Sbjct: 165 RTGMVMKKIGVEPMWLRDGTRVVSTILQVQNCHVIKYFPKHEFNGRTGAVIVGAGTGKPF 224 Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119 ++ + ++PK L F + ++ L P G+ +F VGQ VDV ++ G Sbjct: 225 LKNENYTQYCLDAGLTPKAHLARFPITENARLQP-GTPLHVQHFHVGQYVDVVLKSVDFG 283 >gi|149928577|ref|ZP_01916799.1| ribosomal protein L3 [Limnobacter sp. MED105] gi|149822702|gb|EDM81967.1| ribosomal protein L3 [Limnobacter sp. MED105] Length = 60 Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 36/60 (60%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 M G++ RK+GM ++ G IPVTV+ + + +V +TL+++GY AVQ+ G + Sbjct: 1 MSLGLIGRKIGMMRIFTDAGVSIPVTVVDVSSNRVAQLKTLEQDGYTAVQLAYGSKRASR 60 >gi|227830387|ref|YP_002832167.1| 50S ribosomal protein L3P [Sulfolobus islandicus L.S.2.15] gi|229579206|ref|YP_002837604.1| 50S ribosomal protein L3P [Sulfolobus islandicus Y.G.57.14] gi|229582042|ref|YP_002840441.1| 50S ribosomal protein L3P [Sulfolobus islandicus Y.N.15.51] gi|284997894|ref|YP_003419661.1| ribosomal protein L3 [Sulfolobus islandicus L.D.8.5] gi|259709738|sp|C3MQ59|RL3_SULIL RecName: Full=50S ribosomal protein L3P gi|259709740|sp|C3NHA9|RL3_SULIN RecName: Full=50S ribosomal protein L3P gi|259709741|sp|C3NEE3|RL3_SULIY RecName: Full=50S ribosomal protein L3P gi|227456835|gb|ACP35522.1| ribosomal protein L3 [Sulfolobus islandicus L.S.2.15] gi|228009920|gb|ACP45682.1| ribosomal protein L3 [Sulfolobus islandicus Y.G.57.14] gi|228012758|gb|ACP48519.1| ribosomal protein L3 [Sulfolobus islandicus Y.N.15.51] gi|284445789|gb|ADB87291.1| ribosomal protein L3 [Sulfolobus islandicus L.D.8.5] Length = 351 Score = 90.6 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 63/301 (20%), Positives = 100/301 (33%), Gaps = 101/301 (33%) Query: 4 GVVARKLGMTCVYNIE--------GRRI--PVTVLHL-----------------DNCQVV 36 G V K+GM+ V+ I+ G+ I PVTVL + + + Sbjct: 44 GFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVIT 103 Query: 37 -----------------------------VHRTLDKNG--------------YMAVQVGA 53 + +K G Y + V Sbjct: 104 EYWSPSSLQFLDITRRIHSLSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYFRLLVAT 163 Query: 54 GEAKVKNVSK--PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVD 110 K+ ++ K P K +L D L +G S F GQL+D Sbjct: 164 QPRKIPSLGKKVPDLVEIQIGGGEKKAQL-------DYALNVLGKEISIKDVFKEGQLID 216 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 V G+T GKGF+G +KR++ L H R G R G++G + Sbjct: 217 VVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRK---IGTRGPSLGTPSYTPQPGQLGFH 273 Query: 171 RVTVKNLEVVSV--DDK--------------RG-LILVKGCVPGAKKNSWILVRDSFKSA 213 R T N ++ + D K R IL++G + G+KK I +R++ + + Sbjct: 274 RRTEYNKRIIKIGDDPKEINPAGGFVRYGIVRNTYILLEGSILGSKKRP-IFLREAVRPS 332 Query: 214 V 214 Sbjct: 333 Y 333 >gi|289191591|ref|YP_003457532.1| ribosomal protein L3 [Methanocaldococcus sp. FS406-22] gi|288938041|gb|ADC68796.1| ribosomal protein L3 [Methanocaldococcus sp. FS406-22] Length = 335 Score = 90.6 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 20/137 (14%) Query: 94 VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G + F G+LVD G+T GKGF G +KR H R GS G Q Sbjct: 180 LGKQLNITDVFQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQ 239 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCV 195 P V + M G+MG ++ T N ++ + + + +++KG V Sbjct: 240 -PKMVMWSVPMPGQMGYHQRTEYNKRILKIGNNGDEITPKGGFLHYGVIRNNYVVLKGSV 298 Query: 196 PGAKKNSWILVRDSFKS 212 G K I++R + + Sbjct: 299 QGPAKR-LIVLRRAIRP 314 >gi|229584895|ref|YP_002843397.1| 50S ribosomal protein L3P [Sulfolobus islandicus M.16.27] gi|259709736|sp|C3N5S7|RL3_SULIA RecName: Full=50S ribosomal protein L3P gi|228019945|gb|ACP55352.1| ribosomal protein L3 [Sulfolobus islandicus M.16.27] Length = 351 Score = 90.6 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 63/301 (20%), Positives = 100/301 (33%), Gaps = 101/301 (33%) Query: 4 GVVARKLGMTCVYNIE--------GRRI--PVTVLHL-----------------DNCQVV 36 G V K+GM+ V+ I+ G+ I PVTVL + + + Sbjct: 44 GFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVIT 103 Query: 37 -----------------------------VHRTLDKNG--------------YMAVQVGA 53 + +K G Y + V Sbjct: 104 EYWSPSSLQFLDITRRIRSFSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYFRLLVAT 163 Query: 54 GEAKVKNVSK--PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVD 110 K+ ++ K P K +L D L +G S F GQL+D Sbjct: 164 QPRKIPSLGKKVPDLVEIQIGGGEKKAQL-------DYALNVLGKEISIKDVFKEGQLID 216 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 V G+T GKGF+G +KR++ L H R G R G++G + Sbjct: 217 VVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRK---IGTRGPSLGTPSYTPQPGQLGFH 273 Query: 171 RVTVKNLEVVSV--DDK--------------RG-LILVKGCVPGAKKNSWILVRDSFKSA 213 R T N ++ + D K R IL++G + G+KK I +R++ + + Sbjct: 274 RRTEYNKRIIKIGDDPKEINPAGGFVRYGIVRNTYILLEGSILGSKKRP-IFLREAVRPS 332 Query: 214 V 214 Sbjct: 333 Y 333 >gi|227827691|ref|YP_002829471.1| 50S ribosomal protein L3P [Sulfolobus islandicus M.14.25] gi|238619862|ref|YP_002914688.1| 50S ribosomal protein L3P [Sulfolobus islandicus M.16.4] gi|259709737|sp|C4KHF6|RL3_SULIK RecName: Full=50S ribosomal protein L3P gi|259709739|sp|C3MVH8|RL3_SULIM RecName: Full=50S ribosomal protein L3P gi|227459487|gb|ACP38173.1| ribosomal protein L3 [Sulfolobus islandicus M.14.25] gi|238380932|gb|ACR42020.1| ribosomal protein L3 [Sulfolobus islandicus M.16.4] gi|323474749|gb|ADX85355.1| ribosomal protein L3 [Sulfolobus islandicus REY15A] gi|323477477|gb|ADX82715.1| ribosomal protein L3 [Sulfolobus islandicus HVE10/4] Length = 351 Score = 90.6 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 63/301 (20%), Positives = 100/301 (33%), Gaps = 101/301 (33%) Query: 4 GVVARKLGMTCVYNIE--------GRRI--PVTVLHL-----------------DNCQVV 36 G V K+GM+ V+ I+ G+ I PVTVL + + + Sbjct: 44 GFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVIT 103 Query: 37 -----------------------------VHRTLDKNG--------------YMAVQVGA 53 + +K G Y + V Sbjct: 104 EYWSPSSLQFLDITRRIHSFSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYFRLLVAT 163 Query: 54 GEAKVKNVSK--PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVD 110 K+ ++ K P K +L D L +G S F GQL+D Sbjct: 164 QPRKIPSLGKKVPDLVEIQIGGGEKKAQL-------DYALNVLGKEISIKDVFKEGQLID 216 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 V G+T GKGF+G +KR++ L H R G R G++G + Sbjct: 217 VVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRK---IGTRGPSLGTPSYTPQPGQLGFH 273 Query: 171 RVTVKNLEVVSV--DDK--------------RG-LILVKGCVPGAKKNSWILVRDSFKSA 213 R T N ++ + D K R IL++G + G+KK I +R++ + + Sbjct: 274 RRTEYNKRIIKIGDDPKEINPAGGFVRYGIVRNTYILLEGSILGSKKRP-IFLREAVRPS 332 Query: 214 V 214 Sbjct: 333 Y 333 >gi|15668348|ref|NP_247144.1| 50S ribosomal protein L3P [Methanocaldococcus jannaschii DSM 2661] gi|1710558|sp|P54014|RL3_METJA RecName: Full=50S ribosomal protein L3P gi|1590928|gb|AAB98161.1| LSU ribosomal protein L3P (rplC) [Methanocaldococcus jannaschii DSM 2661] Length = 335 Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 20/137 (14%) Query: 94 VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G + F G+LVD G+T GKGF G +KR H R GS G Q Sbjct: 180 LGKQLNITDVFQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQ 239 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCV 195 P V + M G+MG ++ T N ++ + + + +++KG V Sbjct: 240 -PKMVMWSVPMPGQMGYHQRTEYNKRILKIGNNGDEITPKGGFLHYGVIRNNYVVLKGSV 298 Query: 196 PGAKKNSWILVRDSFKS 212 G K I++R + + Sbjct: 299 QGPAKR-LIVLRRAIRP 314 >gi|154150075|ref|YP_001403693.1| 50S ribosomal protein L3P [Candidatus Methanoregula boonei 6A8] gi|166233155|sp|A7I5N9|RL3_METB6 RecName: Full=50S ribosomal protein L3P gi|153998627|gb|ABS55050.1| ribosomal protein L3 [Methanoregula boonei 6A8] Length = 337 Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 93/282 (32%), Gaps = 72/282 (25%) Query: 4 GVVARKLGMTCVYNIE--------GR--RIPVTVLHLDNCQV--VVHRTLDKNGYMAV-- 49 G K+GMT V ++ G+ +PVT++ + +V + T D G A+ Sbjct: 41 GFAGYKVGMTHVLMVDDHKDSPTEGKEIMVPVTIIEIPTMKVAALRVYTKDTYGKHALTE 100 Query: 50 ------------QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP---- 93 +V + + +K + + + + +P Sbjct: 101 IWAEPLDSQLSRRVTSPKNYDSTAAKKKYSDALAAGLVAEIYALAYTQPATMSGVPKKVP 160 Query: 94 ----------------------VGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130 +G S G D+T +TIGKG G +KR Sbjct: 161 DLMEIKVAGGDIAKQYEYAFGLLGKEIRLSNVIETGAYADITAITIGKGTQGPVKRWGVT 220 Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD------ 184 + H V R G+ G +P V +G+MG + T N ++ + + Sbjct: 221 LRKRKHSVGGKERHVGTLGPW-NPHHVRWEVPQSGQMGYQQRTEFNKRILKIGENGAEIT 279 Query: 185 -----------KRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 + +++KG +PG K I +R + + + Sbjct: 280 PAGGFLNYGVIRNAYVVIKGSIPGPAKR-LIRIRPAIRQGEH 320 >gi|171185278|ref|YP_001794197.1| 50S ribosomal protein L3P [Thermoproteus neutrophilus V24Sta] gi|212288414|sp|B1YD88|RL3_THENV RecName: Full=50S ribosomal protein L3P gi|170934490|gb|ACB39751.1| ribosomal protein L3 [Thermoproteus neutrophilus V24Sta] Length = 338 Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 43/122 (35%), Positives = 56/122 (45%), Gaps = 19/122 (15%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 FT GQLVDV +T GKG+ G +KR L H HR G+ G Q P +F Sbjct: 193 EVFTAGQLVDVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIGP-QAPALMFTQ 251 Query: 161 KKMAGRMGGNRVTVKNLEVVSVD-------DKRG----------LILVKGCVPGAKKNSW 203 + G+MG ++ T N VV + K G IL++G VPGAKK Sbjct: 252 PR-PGQMGFHQRTEYNKRVVKIGDNGAEITPKSGFLHYGVIRGPYILIQGTVPGAKKRLV 310 Query: 204 IL 205 +L Sbjct: 311 VL 312 >gi|209528359|ref|ZP_03276810.1| 50S ribosomal protein L3 [Arthrospira maxima CS-328] gi|209491212|gb|EDZ91616.1| 50S ribosomal protein L3 [Arthrospira maxima CS-328] Length = 79 Score = 89.8 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Query: 137 GVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP 196 S +HR GS G PGRV+ KKMAGR GG ++T + L +V +D +R L+L+KG +P Sbjct: 2 HGSKNHRLPGSIGPGTTPGRVYPGKKMAGRYGGKQITTRKLTIVRIDLERNLLLIKGSIP 61 Query: 197 GAKKNSWILVRDS 209 G + ++ + Sbjct: 62 GKP-GGLLNIKPA 73 >gi|150401236|ref|YP_001325002.1| 50S ribosomal protein L3P [Methanococcus aeolicus Nankai-3] gi|166233154|sp|A6UV68|RL3_META3 RecName: Full=50S ribosomal protein L3P gi|150013939|gb|ABR56390.1| ribosomal protein L3 [Methanococcus aeolicus Nankai-3] Length = 333 Score = 89.8 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 19/130 (14%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 FT G+ +D +T GKGF G +KR H R GS G P R+ Sbjct: 186 DVFTGGEFIDTVAITKGKGFQGPVKRWGIKIQFGKHQNKGVGRHTGSIGPW-TPKRIMWT 244 Query: 161 KKMAGRMGGNRVTVKNLEVVSVD-----------------DKRGLILVKGCVPGAKKNSW 203 MAG++G ++ T N ++ + K +LVKG V G K Sbjct: 245 VPMAGQVGFHQRTEYNKRILKIGENGSEIVPKGGFLNYGVVKNNYVLVKGSVQGPAKR-M 303 Query: 204 ILVRDSFKSA 213 +++R++ ++ Sbjct: 304 VVLREAIRNP 313 >gi|289597193|ref|YP_003483889.1| ribosomal protein L3 [Aciduliprofundum boonei T469] gi|289534980|gb|ADD09327.1| ribosomal protein L3 [Aciduliprofundum boonei T469] Length = 340 Score = 89.1 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 59/271 (21%), Positives = 91/271 (33%), Gaps = 62/271 (22%) Query: 4 GVVARKLGMTCVYNIEGRRI----------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG- 52 G K GMT V+ I+ R+ PVTV+ + +V R ++ Y +G Sbjct: 41 GFAGYKAGMTHVFTIDWRKHTTTAGQEIWTPVTVIEVPPMKVAGVRFYERTMYGLKSIGE 100 Query: 53 -------------AGEAKVKNVSKPMR---------------------GFFSSV--NVSP 76 K + K + G + Sbjct: 101 VWDENLDKELARRFPLPKEYSKDKALERIKGDIEDIRLIVHTQPRLVSGVPKKAPDIMEI 160 Query: 77 KKKLFEFRVQKDDDLLPVGSVFSPSYFT-VGQLVDVTGMTIGKGFSGAMKRHNFGGLRAT 135 + +K+ L +G S F G+ VDV +T GKGF G +KR L Sbjct: 161 RVGGGTIDARKEYALNLLGKEIKFSDFKSDGKFVDVIAITKGKGFQGHVKRFGVKLLNQK 220 Query: 136 HGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------DDKRGL- 188 + R G+ G P V AG+MG ++ T N +V + ++ L Sbjct: 221 NRKHR--RMIGTLGPW-HPDWVRYTVPQAGQMGYHQRTEYNKRIVKYVDFIEENGEKRLA 277 Query: 189 --ILVKGCVP--GAKKNSWILVRDSFKSAVN 215 I KG P G KN+++L+ S Sbjct: 278 IDITPKGGFPHYGEVKNAYVLIHGSVPGPAK 308 >gi|147919334|ref|YP_686930.1| 50S ribosomal protein L3P [uncultured methanogenic archaeon RC-I] gi|121685298|sp|Q0W1Y9|RL3_UNCMA RecName: Full=50S ribosomal protein L3P gi|110622326|emb|CAJ37604.1| 50S ribosomal protein L3P [uncultured methanogenic archaeon RC-I] Length = 337 Score = 89.1 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 49/284 (17%), Positives = 88/284 (30%), Gaps = 72/284 (25%) Query: 4 GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53 G V K GM+ + ++ R +PVT++ V R D + Y +G Sbjct: 41 GFVGFKAGMSHIVMVDDRPHSATEGMEISVPVTIVEAPQMHVAGIRVYDDSPYGKKVIGE 100 Query: 54 GEA-------------KVKNVSKPMRGFFS---SVNVSPKKKLFEFRVQKDDDLLP---- 93 K + + V ++ + + +P Sbjct: 101 AWISDLKMLESLTHLPKNGYKTDEQLAKIAELVKKGVVADLRVMTVTLTSEVSGIPKKVP 160 Query: 94 ----------------------VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130 +G F G+LVDV+ +T G G G + R Sbjct: 161 ELMENRIAGGDMAKRFEFAKSLMGKAVGIKDVFAPGELVDVSAITKGYGTQGPVVRWGIA 220 Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK----- 185 + H + R G+ G +P R+ G+ G ++ T N ++ + DK Sbjct: 221 TQKRKHARTGKKRHVGNLGPW-NPHRIRWQVPQLGQTGYHQRTEYNKRILKMGDKAEEIT 279 Query: 186 ------------RGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 I++KG +PG K + +R + + K Sbjct: 280 PAGGFLHYGLIRNDYIMLKGSIPGPVKR-MVRIRPAVRPKNMPK 322 >gi|150399607|ref|YP_001323374.1| 50S ribosomal protein L3P [Methanococcus vannielii SB] gi|9910844|sp|Q9UWG2|RL3_METVA RecName: Full=50S ribosomal protein L3P gi|166233160|sp|A6UQJ0|RL3_METVS RecName: Full=50S ribosomal protein L3P gi|150012310|gb|ABR54762.1| ribosomal protein L3 [Methanococcus vannielii SB] Length = 334 Score = 88.7 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 4/125 (3%) Query: 94 VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G S F G+ +D +T GKGF G +KR H R GS G + Sbjct: 179 LGKTLSINDVFETGEFIDTLAVTKGKGFQGPVKRWGVKIQFGKHQRKGVGRQTGSIGPWR 238 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDSF 210 P RV +AG+MG ++ T N ++ + + I KG GA KN +++V+ + Sbjct: 239 -PKRVMWTVPLAGQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGAVKNGYVVVKGTV 297 Query: 211 KSAVN 215 + Sbjct: 298 QGPAK 302 >gi|254168629|ref|ZP_04875472.1| ribosomal protein L3 [Aciduliprofundum boonei T469] gi|197622463|gb|EDY35035.1| ribosomal protein L3 [Aciduliprofundum boonei T469] Length = 340 Score = 88.7 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 60/285 (21%), Positives = 93/285 (32%), Gaps = 78/285 (27%) Query: 4 GVVARKLGMTCVYNIEGRRI----------PVTVLHLDNCQVVVHRTLDKNGY------- 46 G K GMT V+ I+ R+ PVTV+ + +V R ++ Y Sbjct: 41 GFAGYKAGMTHVFTIDWRKHTTTAGQEIWTPVTVIEVPPMKVAGVRFYERTMYGLKSIGE 100 Query: 47 -----------------------MAVQVGAGEAKVKNV-----SKPMRGFFSSV--NVSP 76 A++ G+ + + K + G + Sbjct: 101 VWDENLDKELARRFPLPKEYSKDKALERIKGDIEDIRLIVHTQPKLVSGVPKKAPDIMEI 160 Query: 77 KKKLFEFRVQKDDDLLPVGSVFSPSYFT-VGQLVDVTGMTIGKGFSGAMKRHNFGGLRAT 135 + +K+ L +G S F G+ VDV +T GKGF G +KR L Sbjct: 161 RVGGGTIDARKEYALNLLGKEIKFSDFKSDGKFVDVIAITKGKGFQGHVKRFGVKLLNQK 220 Query: 136 HGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS-VD----------- 183 + R G+ G P V AG+MG ++ T N +V VD Sbjct: 221 NRKHR--RMIGTLGPW-HPDWVRYTVPQAGQMGYHQRTEYNKRIVKYVDFIEENGEKKLA 277 Query: 184 --------------DKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 K +L+ G VPG K + RD + + Sbjct: 278 IDITPKGGFLHYGEVKNEYVLIHGSVPGPAKR-LVRFRDPVRQTL 321 >gi|330508498|ref|YP_004384926.1| 50S ribosomal protein L3 [Methanosaeta concilii GP-6] gi|328929306|gb|AEB69108.1| ribosomal protein L3 [Methanosaeta concilii GP-6] Length = 334 Score = 88.7 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 58/281 (20%), Positives = 91/281 (32%), Gaps = 73/281 (25%) Query: 4 GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53 G K GMT V I+ R PVTVL + VV R + Y A Sbjct: 40 GFAGYKAGMTHVMMIDDRPRSLTEGMEISTPVTVLEVPPMNVVAVRAYES--YNGGLRPA 97 Query: 54 GEAKVKNVS----KPMRGFFSSVNVSPK------------------------------KK 79 GE +N+S + M + +P + Sbjct: 98 GELWAENLSPELSRAMTVPKKTRGTAPGDLVALGDDIADVRVLVHTNPTLVSGIPKKVPE 157 Query: 80 LFEFRVQKDD-------DLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 + E + +G S F +G L+D + +T GKG G ++R Sbjct: 158 IMEMPINGGSMNDRLSFAQTLLGQQVPISSVFELGDLMDTSAVTKGKGTQGPVRRWGIAM 217 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD------- 184 + H + R G+ G P + G+MG ++ T N ++ + Sbjct: 218 AKRKHARTGKVRHVGNLGPW-HPAHISWRVPQLGQMGYHQRTEYNKRLMFIGTDGSKITP 276 Query: 185 ----------KRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 K IL+KG VPG K + +R + + N Sbjct: 277 DGGFPGYGVIKNQYILIKGSVPGPIKR-LVRMRHAMRPGKN 316 >gi|21228226|ref|NP_634148.1| 50S ribosomal protein L3P [Methanosarcina mazei Go1] gi|42559655|sp|Q8PV50|RL3_METMA RecName: Full=50S ribosomal protein L3P gi|20906682|gb|AAM31820.1| LSU ribosomal protein L3P [Methanosarcina mazei Go1] Length = 337 Score = 88.3 bits (218), Expect = 7e-16, Method: Composition-based stats. Identities = 60/289 (20%), Positives = 98/289 (33%), Gaps = 80/289 (27%) Query: 7 ARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHR--TLDKNGYMAVQ---- 50 K+GMT V ++ + +PVTV+ +V R T D G A+ Sbjct: 44 GYKVGMTHVIMVDDIKNSLTQGMEISVPVTVIETPAIRVAAVRAYTEDSTGEKAIAEAWA 103 Query: 51 -------------------------VGA----GEAKVKN-----VSKPMRGFFSS----- 71 +G G + K + G Sbjct: 104 ADLDSELKRRIPIPAAGNQAEGLENIGKLIEEGRVSDIRAVTYTLPKSLTGVPKKVPDIM 163 Query: 72 -VNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129 +S K +F + +G++ + F G +VD +TIGKG G +KR Sbjct: 164 ESGISAKDLGAKF----EYAKSILGNLVNVTDVFKNGTVVDTAAITIGKGTQGPVKRWGI 219 Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--DDKR- 186 + H S R G+ G +P RV G+MG ++ T N ++ + D + Sbjct: 220 QLQKGKHSRQGSLRQIGTLGSF-NPSRVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEEV 278 Query: 187 --------------GLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 +L+KG VPG K I +RD ++ G+ + Sbjct: 279 TPEGGFINYGLVRGDYVLIKGSVPGPSKR-LIRLRDPIRAKKADLGEPN 326 >gi|145592242|ref|YP_001154244.1| 50S ribosomal protein L3P [Pyrobaculum arsenaticum DSM 13514] gi|212288408|sp|A4WMH5|RL3_PYRAR RecName: Full=50S ribosomal protein L3P gi|145284010|gb|ABP51592.1| LSU ribosomal protein L3P [Pyrobaculum arsenaticum DSM 13514] Length = 338 Score = 87.9 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 4/117 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F+ GQLVDV +T GKG+ G +KR L H HR G+ G Q P +F Sbjct: 193 DVFSPGQLVDVIAVTKGKGWQGVVKRFGVTILPRWHKHRKGHRRTGTIGP-QAPALMFTQ 251 Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDSFKSAVN 215 + G+MG ++ T N ++ + + I K P G K +IL++ S A Sbjct: 252 PR-PGQMGFHQRTEYNKRLLKIGENGAEITPKSGFPHYGVIKGPYILIQGSLPGARK 307 >gi|167945157|ref|ZP_02532231.1| Ribosomal protein L3 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 61 Score = 87.5 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 23/54 (42%), Positives = 34/54 (62%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG 54 M GV+ RK+GMT V+ EG +PVTV+ + +V ++ D +GY A+QV G Sbjct: 1 MAIGVIGRKIGMTRVFTEEGASVPVTVIEVAPNRVSQLKSEDTDGYRAIQVTTG 54 >gi|282164890|ref|YP_003357275.1| 50S ribosomal protein L3P [Methanocella paludicola SANAE] gi|282157204|dbj|BAI62292.1| 50S ribosomal protein L3P [Methanocella paludicola SANAE] Length = 341 Score = 87.1 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 60/282 (21%), Positives = 96/282 (34%), Gaps = 71/282 (25%) Query: 5 VVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMA------ 48 +V K GM+ V ++ R IPVT++ V R D Y Sbjct: 42 LVGFKAGMSHVVMVDDRPHSTTEGMEISIPVTIIETPAMNVAGIRAYDDGPYGKHVLAEA 101 Query: 49 ---------------------VQVG--AGEAKVKNV----------SKPMRGFFSSVNVS 75 Q+ AG K V ++ + G V Sbjct: 102 WVNDAKDLAKLFRLPKSVDTDAQLAKVAGLVKDGKVAELRLLTYVKTEEVSGIPKKVPEL 161 Query: 76 PKKKLFEFRVQKDDDLLP--VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132 + ++ + K + +G P F G+LVDV+ +T GKG G +KR Sbjct: 162 LENRVAGGSMDKRFEFAKSLLGKQVKPNDIFVPGELVDVSAITKGKGTQGPVKRWGIAIQ 221 Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK------- 185 + H + R G+ G +P RV G+ G ++ T N ++ + +K Sbjct: 222 KRKHARTGKKRHVGNLGPW-NPHRVRWQVPQLGQTGYHQRTEYNKRIIKLGEKAEEVTPE 280 Query: 186 ---------RG-LILVKGCVPGAKKNSWILVRDSFKSAVNCK 217 R I+VKG +PG K + VR + + K Sbjct: 281 GGFLHYGVLRNPYIVVKGSIPGPVKR-MVRVRPAVRPKNMPK 321 >gi|15920641|ref|NP_376310.1| 50S ribosomal protein L3P [Sulfolobus tokodaii str. 7] gi|42559677|sp|Q975I1|RL3_SULTO RecName: Full=50S ribosomal protein L3P gi|15621424|dbj|BAB65419.1| 343aa long hypothetical 50S ribosomal protein L3 [Sulfolobus tokodaii str. 7] Length = 343 Score = 86.7 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 8/126 (6%) Query: 94 VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR- 151 +G S F GQL+D+ G+T GKGF G +KR+ L H R G+ G Sbjct: 191 LGKPLSVKDVFKEGQLIDIIGVTKGKGFQGVVKRYGVVELPRWHKHRKGSRKVGARGPSF 250 Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDS 209 P G+MG +R T N ++ + D I KG G +N+++++ S Sbjct: 251 STPS----YVPQPGQMGYHRRTEYNKRILKISDDPNEINPKGGFVNYGIVRNTYLIIEGS 306 Query: 210 FKSAVN 215 A Sbjct: 307 IIGAKK 312 >gi|126465913|ref|YP_001041022.1| 50S ribosomal protein L3P [Staphylothermus marinus F1] gi|212288413|sp|A3DNA4|RL3_STAMF RecName: Full=50S ribosomal protein L3P gi|126014736|gb|ABN70114.1| LSU ribosomal protein L3P [Staphylothermus marinus F1] Length = 395 Score = 86.7 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 50/136 (36%), Gaps = 21/136 (15%) Query: 88 DDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146 D +G+ + F GQ +D+ G+T GKGF G +KR L H R Sbjct: 235 DYAEKLLGNYVTVDQVFREGQFIDIIGVTKGKGFQGVIKRFGVKELPRWHKHRKGSRK-- 292 Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD-------DKRG----------LI 189 G R G+MG +R T N ++ + K G I Sbjct: 293 -IGSRSPGFGTMSETPQPGQMGFHRRTEYNKRIIKIGINGWEVTPKGGFLGYGIVYGPYI 351 Query: 190 LVKGCVPGAKKNSWIL 205 ++ G + G +K +L Sbjct: 352 MLHGSIIGPRKRLLVL 367 >gi|42559687|sp|Q9AIN8|RL3_CARRU RecName: Full=50S ribosomal protein L3 gi|13310845|gb|AAK18637.1|AF250389_3 ribosomal protein L3 [Candidatus Carsonella ruddii] Length = 136 Score = 86.7 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 3/90 (3%) Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 + GKGF G +KR NF +HG S+S+R+ GSTG QDPGRVFK KKM GRMG + Sbjct: 46 SKGKGFQGVVKRWNFKTKDKSHGNSLSYRTLGSTGQCQDPGRVFKKKKMPGRMGNKK--- 102 Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWI 204 +L V K+ +K +PG K + + Sbjct: 103 FSLFVNIFFRKKNYFFLKKILPGVKNDILL 132 >gi|29027489|gb|AAO61962.1| ribosomal protein L3 [Aster yellows phytoplasma] Length = 81 Score = 86.7 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 35/58 (60%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60 SG++ + +GMT +Y+ G +P +++ C V+ +T +K+GY + Q+G E K N Sbjct: 4 SGIIGKNIGMTSIYDESGFNVPCSIIEAGPCIVLQIKTKEKDGYNSCQLGFDEKKNTN 61 >gi|313125790|ref|YP_004036060.1| LSU ribosomal protein l3p [Halogeometricum borinquense DSM 11551] gi|312292155|gb|ADQ66615.1| LSU ribosomal protein L3P [Halogeometricum borinquense DSM 11551] Length = 338 Score = 86.7 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 59/280 (21%), Positives = 82/280 (29%), Gaps = 73/280 (26%) Query: 4 GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGYMA----- 48 G K GMT V + +PVTV+ + V R + Y A Sbjct: 41 GFAGYKAGMTQVMMVNDEANSPREGMEEAVPVTVVETPPMRAVAVRAYEDTPYGAKPLTE 100 Query: 49 ------------------------------VQVGAGEAKVKNVSKPMRGFFSSVNVSPKK 78 V AGE V K Sbjct: 101 VWASEFVENLDRTLDLPSEDTFEEDADDLRAAVEAGEVDDIRVITHTVPASMKNIPKKKP 160 Query: 79 KLFEFRV---------QKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHN 128 + E RV DL+ G S F G+ +D G+T GKG G +KR Sbjct: 161 DVMETRVGGGSLQERSDFALDLVEEGGEHSMSDVFRAGEYLDAAGVTKGKGTQGPVKRWG 220 Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS------- 181 + H R G+ G +P RV G+ G ++ T N ++ Sbjct: 221 VQKRKGKHARQGWRRRIGNLGPW-NPSRVRSTVPQLGQTGYHQRTELNKRLIDLGDGDDA 279 Query: 182 -VD--------DKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD LVKG +PG K + R + + Sbjct: 280 TVDGGFVGYGEVDGPYALVKGSLPGPDKR-LLRFRPAIRP 318 >gi|91772083|ref|YP_564775.1| 50S ribosomal protein L3P [Methanococcoides burtonii DSM 6242] gi|121689445|sp|Q12ZV1|RL3_METBU RecName: Full=50S ribosomal protein L3P gi|91711098|gb|ABE51025.1| LSU ribosomal protein L3P [Methanococcoides burtonii DSM 6242] Length = 337 Score = 86.4 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 60/286 (20%), Positives = 97/286 (33%), Gaps = 72/286 (25%) Query: 4 GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGYMAVQVG- 52 G K+GMT V I+ + +PVT++ +V R K+ Y + + Sbjct: 41 GFAGYKVGMTHVIMIDDVKHSLTEGTEISVPVTIIETPAIRVAAIRAYGKDTYGEIAIAE 100 Query: 53 ----AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP--------------- 93 + + K + + ++ + L E D L+ Sbjct: 101 AWTDVLDKDLSRRLKTAKNPDVNASLEKLETLVESGRANDIRLITYTLPSTLTGVPKKVP 160 Query: 94 -------VGSVFSP----------------SYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130 GS F G++VDV +T G G G +KR Sbjct: 161 DVMETGVSGSDVKAKFEYAKTVLGTMVEISDVFDNGKIVDVAAITTGHGTQGPVKRWGIN 220 Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS----VDDKR 186 ++ H S R G+ G P V AG+MG ++ T N ++ VD+ Sbjct: 221 LMKNKHSRQGSLRQVGTLGPW-TPAHVSWRVPQAGQMGYHQRTDYNKRILKMSSDVDEVN 279 Query: 187 -------------GLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 IL+KG VPG K I +R+ +S V+ G+ Sbjct: 280 PAGGFVNYGLVRGNYILIKGSVPGPSKR-LIRLREPTRSKVSSIGE 324 >gi|302348734|ref|YP_003816372.1| 50S ribosomal protein L3P [Acidilobus saccharovorans 345-15] gi|302329146|gb|ADL19341.1| 50S ribosomal protein L3P [Acidilobus saccharovorans 345-15] Length = 329 Score = 86.4 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 85/274 (31%), Gaps = 75/274 (27%) Query: 4 GVVARKLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHR---TLDKNGYMAV- 49 G + K GMT + ++ G+ + P+TVL V+ R + G V Sbjct: 28 GFIGYKAGMTHAFIVDNRQGSPTFGKEVFRPITVLEAPPIFVLAVRGYGYDENRGLYTVG 87 Query: 50 -----------------QVGA--------------GEAKVKNV-----SKPMRGFFSSV- 72 +GA + K V K G Sbjct: 88 EAWARPPLDLELERRISAIGAFDTQSMLKKLEASLSDIKEVRVLVATQPKLTGGLSKKSP 147 Query: 73 ---NVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHN 128 V + + D +G S F G +VDV +T GKGF G +KR Sbjct: 148 DLLEVKVASPGSDVKAAFDYATSILGKTLSVGEVFQPGLMVDVIAVTKGKGFQGDVKRFG 207 Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------ 182 L H R G R + G++G +R T N ++ + Sbjct: 208 VKVLPRWHKHRKKAR---GIGARSHGKGTWWEIPNPGQLGFHRRTEYNKRILDITDDWAA 264 Query: 183 -----------DDKRGLILVKGCVPGAKKNSWIL 205 + L++++G +PGA K ++ Sbjct: 265 YTPAGGFLHYGIPRSTLVVLEGTIPGAVKRPIVM 298 >gi|222480857|ref|YP_002567094.1| ribosomal protein L3 [Halorubrum lacusprofundi ATCC 49239] gi|222453759|gb|ACM58024.1| ribosomal protein L3 [Halorubrum lacusprofundi ATCC 49239] Length = 338 Score = 85.2 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 56/288 (19%), Positives = 81/288 (28%), Gaps = 89/288 (30%) Query: 4 GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53 G K GMT V + +PVTV+ V R ++ Y G Sbjct: 41 GFAGYKAGMTHVVMVNDEANSPREGMETSVPVTVVETPPMYAVALRAYEQTPY-----GK 95 Query: 54 GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP------------- 100 + + P + FE + LL G+V Sbjct: 96 KPVEEVWAT-EFHEELDRALDLPAEDTFEEDADELRALLDEGAVDDVRVITHTVPSELAN 154 Query: 101 --------------------------------------SYFTVGQLVDVTGMTIGKGFSG 122 F GQ DV+G+T GKG G Sbjct: 155 VPKKKPDVMETRVGGGSLEERVDFGLDLVAEGGAHEFGDVFRAGQYTDVSGITKGKGTQG 214 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS- 181 +KR + H R G+ G +P RV G+ G ++ T N ++ Sbjct: 215 PVKRWGVQKRKGKHARQGWRRRIGNLGPW-NPSRVRSTVPQQGQTGYHQRTELNKRLIDF 273 Query: 182 -----------------VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 VD + LI KG +PG K I R + + Sbjct: 274 GEGDDASVDGGFVNYGEVDGEYALI--KGSLPGPDKR-LIRFRPAIRP 318 >gi|291533622|emb|CBL06735.1| hypothetical protein MHY_20500 [Megamonas hypermegale ART12/1] Length = 60 Score = 84.4 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 37/59 (62%) Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 M ++ +KLGMT ++ EG+ +PVTV+ V+ +T++ +GY AVQ+G G K K Sbjct: 1 MAKVILGKKLGMTQIFTEEGKVVPVTVVESGKNVVLQSKTVETDGYNAVQIGFGTVKEK 59 >gi|300710375|ref|YP_003736189.1| 50S ribosomal protein L3P [Halalkalicoccus jeotgali B3] gi|299124058|gb|ADJ14397.1| 50S ribosomal protein L3P [Halalkalicoccus jeotgali B3] Length = 337 Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 18/136 (13%) Query: 93 PVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 G + F G+ +DV+G+T GKG G +KR + H R G+ G Sbjct: 184 EGGEHEATDVFRAGEYLDVSGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW- 242 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVV------SVDDKRGLI----------LVKGCVP 196 +P RV G+ G ++ T N ++ V+ GL+ L+KG +P Sbjct: 243 NPSRVRSTVPQQGQTGYHQRTELNKRLLALGEEDDVNPDGGLVNYGEVSGPYTLIKGSLP 302 Query: 197 GAKKNSWILVRDSFKS 212 G K + R + + Sbjct: 303 GPDKR-VLRFRPAIRP 317 >gi|307595041|ref|YP_003901358.1| 50S ribosomal protein L3 [Vulcanisaeta distributa DSM 14429] gi|307550242|gb|ADN50307.1| ribosomal protein L3 [Vulcanisaeta distributa DSM 14429] Length = 342 Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 20/129 (15%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F+ GQ VDV +T GKG+ G +KR N L H +R G+ G Q+P F Sbjct: 194 DVFSEGQYVDVAAITKGKGWQGVVKRFNVKILPKWHKHRKGYRRIGAIGP-QNPALTFTT 252 Query: 161 KKMAGRMGGNRVTVKNLEVVSVD------------DKRGL-----ILVKGCVPGAKKNSW 203 + G+MG ++ T N ++ + G+ I+++G VPG K Sbjct: 253 PR-PGQMGLHKRTEYNKRILRIGMNGAEVTPSSGFPHYGIIKGPYIVLEGTVPGVVKR-L 310 Query: 204 ILVRDSFKS 212 + +R + Sbjct: 311 VTLRFPVRP 319 >gi|76803057|ref|YP_331152.1| 50S ribosomal protein L3P [Natronomonas pharaonis DSM 2160] gi|109893528|sp|Q3IMY8|RL3_NATPD RecName: Full=50S ribosomal protein L3P gi|76558922|emb|CAI50518.1| ribosomal protein L3 [Natronomonas pharaonis DSM 2160] Length = 336 Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 38/145 (26%), Positives = 55/145 (37%), Gaps = 18/145 (12%) Query: 85 VQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHR 143 V DL+ G + F G+ DV G+T GKG G +KR + H R Sbjct: 175 VDFALDLVDDGGEHTVTDVFRAGEYTDVAGITKGKGTQGPVKRWGVQKRKGKHARQGWRR 234 Query: 144 SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV-----SVDDKRGLI--------- 189 G+ G +P RV G+ G ++ T N ++ V G + Sbjct: 235 RIGNLGPW-NPSRVRSTVPQQGQTGYHQRTELNKRLIDLGDDDVSPDGGFVNYGEVDGPY 293 Query: 190 -LVKGCVPGAKKNSWILVRDSFKSA 213 LVKG VPG K + R + + Sbjct: 294 ALVKGSVPGPDKR-LVRFRPAVRPG 317 >gi|159463060|ref|XP_001689760.1| predicted protein [Chlamydomonas reinhardtii] gi|158283748|gb|EDP09498.1| predicted protein [Chlamydomonas reinhardtii] Length = 264 Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 21/160 (13%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 V G + S G F S P+ ++ V + + L +GS S + + VG + Sbjct: 51 VCQGWRASFSPSPIELGCFPSSPRRPEA-WYDLGVLEMYEYLGIGSGLSITDY-VGHIKH 108 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 + + G +G +KR + THG S SHR HGS G P RV+ KMAG+ Sbjct: 109 RSLHSRGP--AGTIKRWHHKRGAMTHG-SKSHREHGSIGSATTPSRVYPGLKMAGQ---- 161 Query: 171 RVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210 VD +R ++VKG VPG N + + + Sbjct: 162 -----------VDTERRALVVKGSVPGKVGN-VVEIVPAK 189 >gi|305662572|ref|YP_003858860.1| LSU ribosomal protein L3P [Ignisphaera aggregans DSM 17230] gi|304377141|gb|ADM26980.1| LSU ribosomal protein L3P [Ignisphaera aggregans DSM 17230] Length = 340 Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 5/110 (4%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F VGQ +D+ G+T GKGF G +KR L H R G R Sbjct: 196 VFNVGQFIDIIGVTKGKGFQGVIKRFGVKELPRWHKHRKGSRR---IGSRSPTIGAMSET 252 Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDS 209 AG+MG +R T N ++++ DK I G P G K+ WI+V+ S Sbjct: 253 PQAGQMGFHRRTEYNKRILAMGDKGEEITPSGGFPHYGIVKSMWIMVQGS 302 >gi|325969277|ref|YP_004245469.1| 50S ribosomal protein L3P [Vulcanisaeta moutnovskia 768-28] gi|323708480|gb|ADY01967.1| 50S ribosomal protein L3P [Vulcanisaeta moutnovskia 768-28] Length = 342 Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 35/137 (25%), Positives = 55/137 (40%), Gaps = 21/137 (15%) Query: 94 VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G + F GQ VDV +T GKG G +KR N L H +R G+ G Q Sbjct: 186 LGKDINVTDVFNEGQYVDVAAITKGKGLQGVVKRFNVKILPKWHKHRKGYRRIGAIGP-Q 244 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-----------------DDKRGLILVKGCV 195 +P F + G+MG ++ T N ++ + K + ++G V Sbjct: 245 NPALAFTTPR-PGQMGLHKRTEYNKRILKIGLNGAEVTPSSGFPHYGIVKGPYMALEGSV 303 Query: 196 PGAKKNSWILVRDSFKS 212 PG K + +R + Sbjct: 304 PGIVKR-LVTLRFPVRP 319 >gi|15897623|ref|NP_342228.1| 50S ribosomal protein L3P [Sulfolobus solfataricus P2] gi|284174948|ref|ZP_06388917.1| 50S ribosomal protein L3P [Sulfolobus solfataricus 98/2] gi|9910845|sp|Q9UXA8|RL3_SULSO RecName: Full=50S ribosomal protein L3P gi|6015757|emb|CAB57584.1| ribosomal protein L3 (HMAL3) [Sulfolobus solfataricus P2] gi|13813888|gb|AAK41018.1| LSU ribosomal protein L3AB (rpl3AB) [Sulfolobus solfataricus P2] gi|261602391|gb|ACX91994.1| ribosomal protein L3 [Sulfolobus solfataricus 98/2] Length = 351 Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 22/145 (15%) Query: 88 DDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146 D L +G + F GQL+DV G+T GKGF+G +KR++ L H R Sbjct: 193 DYALNILGKEITIRDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRK-- 250 Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK----------------RG-LI 189 G R G++G +R T N ++ + D+ R + Sbjct: 251 -IGTRGPSLGTPSYTPQPGQLGFHRRTEYNKRIIKIGDEPKEINPAGGFVRYGIVRNTYV 309 Query: 190 LVKGCVPGAKKNSWILVRDSFKSAV 214 L++G + G+KK I +R+ + + Sbjct: 310 LLEGSILGSKKRP-IFLREPVRPSY 333 Score = 40.5 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 10/53 (18%) Query: 4 GVVARKLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHRTLDKNGY 46 G V K+GMT V+ I+ G+ I PVTVL + + R +G Sbjct: 44 GFVGYKVGMTHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAIDGK 96 >gi|320101368|ref|YP_004176960.1| 50S ribosomal protein L3P [Desulfurococcus mucosus DSM 2162] gi|319753720|gb|ADV65478.1| LSU ribosomal protein L3P [Desulfurococcus mucosus DSM 2162] Length = 396 Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 37/134 (27%), Positives = 51/134 (38%), Gaps = 22/134 (16%) Query: 90 DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTG 149 + + G V + F GQ +DV G+T GKGF G +KR L H R G Sbjct: 238 ESILGGYVKAADVFMEGQFIDVIGVTKGKGFQGVVKRFGVKELPRWHKHRKGSRK---IG 294 Query: 150 CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL------------------ILV 191 R AG+MG +R T N ++ + GL +++ Sbjct: 295 ARSPGFGTMSEPPQAGQMGFHRRTEYNKRILRIGL-NGLEATVEGGFLHYGLVYGPYLML 353 Query: 192 KGCVPGAKKNSWIL 205 KG V G K IL Sbjct: 354 KGTVFGPAKRMLIL 367 >gi|70606412|ref|YP_255282.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius DSM 639] gi|76363364|sp|Q4JB40|RL3_SULAC RecName: Full=50S ribosomal protein L3P gi|68567060|gb|AAY79989.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius DSM 639] Length = 342 Score = 82.5 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 6/125 (4%) Query: 94 VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G F GQL D+ G+T GKGF G +KR++ H R G R Sbjct: 190 LGKQIPVRDVFREGQLTDIIGVTKGKGFQGVIKRYSVVEFPRWHKHRKGSRK---IGARG 246 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDSF 210 G++G +R T N ++ + D I G + G KN+++++ S Sbjct: 247 PSISTPSYVPQPGQLGFHRRTEYNKRIIKIGDNVNEINPAGGIVNYGLVKNTYLVIEGSV 306 Query: 211 KSAVN 215 + Sbjct: 307 LGSRK 311 >gi|322372168|ref|ZP_08046709.1| 50S ribosomal protein L3P [Haladaptatus paucihalophilus DX253] gi|320548177|gb|EFW89850.1| 50S ribosomal protein L3P [Haladaptatus paucihalophilus DX253] Length = 338 Score = 82.1 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 54/280 (19%), Positives = 86/280 (30%), Gaps = 73/280 (26%) Query: 4 GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHR-------------- 39 G K GMT V + +PVT++ + V R Sbjct: 41 GFAGYKAGMTHVVMVNDEANSPREGMEETVPVTIVETPPMRAVALRAYEDTPYGKKPMTE 100 Query: 40 ---------------TLDKNGYMAV------QVGAGEAKVKNVSKPMRGFFSSVNVSPKK 78 + + A + AG+ V + Sbjct: 101 VWGSEFHDELDRTLNVPENHDADAAEDELRAAIEAGDVADLRVITHTVPSDLKNVPKKRP 160 Query: 79 KLFEFRV---------QKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHN 128 + E RV +LL G F G+ +D +G+T GKG G +KR Sbjct: 161 DVMETRVGGGSISDRADFALELLEDGGEHDITDVFRAGEYLDTSGVTKGKGTQGPVKRWG 220 Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--DDKR 186 + H R G+ G +P RV G+ G ++ T N ++S+ DD+ Sbjct: 221 VQKRKGKHARQGWRRRIGNLGPW-NPSRVRSTVPQLGQTGYHQRTELNKRLISLGDDDEA 279 Query: 187 GL--------------ILVKGCVPGAKKNSWILVRDSFKS 212 + L+KG VPG K + R + + Sbjct: 280 SVDGGFVNYGEVDGPYALIKGSVPGPNKR-LVRFRPAVRP 318 >gi|255513436|gb|EET89702.1| ribosomal protein L3 [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 322 Score = 82.1 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 24/143 (16%) Query: 88 DDDLLPVGSVFS-PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146 D VG F G+ +DV +T GKG++G +KRH L H + R G Sbjct: 165 DFAAQLVGKEVKPADVFKGGEFIDVVSVTKGKGWAGVIKRHGVRRLD--HKATQKIRHIG 222 Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV---------SVDDKRGL--------- 188 + G PG++ G++G N T N ++ V+ K G+ Sbjct: 223 ALGAF-TPGKIMYTVPRPGQLGFNYRTEHNKRILVLGAASDTEKVNIKSGIKNYGLVKSD 281 Query: 189 -ILVKGCVPGAKKNSWILVRDSF 210 IL++G VPG K + ++ S Sbjct: 282 YILIEGSVPGPAKR-IVRLKKSV 303 >gi|257053359|ref|YP_003131192.1| 50S ribosomal protein L3P [Halorhabdus utahensis DSM 12940] gi|256692122|gb|ACV12459.1| ribosomal protein L3 [Halorhabdus utahensis DSM 12940] Length = 338 Score = 81.7 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 49/128 (38%), Gaps = 18/128 (14%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F G+ DV G+T GKG G +KR + H R G+ G +P RV Sbjct: 193 DVFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW-NPSRVRST 251 Query: 161 KKMAGRMGGNRVTVKNLEVVSV----------------DDKRGLILVKGCVPGAKKNSWI 204 G+ G ++ T N ++ + + L+KG +PG + + Sbjct: 252 VPQQGQTGYHQRTELNKRLIDFGDEDDVTPDGGFVNYGEVEGNYALIKGSIPGPD-SRLV 310 Query: 205 LVRDSFKS 212 +R + + Sbjct: 311 RLRPAVRP 318 >gi|126178514|ref|YP_001046479.1| 50S ribosomal protein L3P [Methanoculleus marisnigri JR1] gi|166233158|sp|A3CSZ7|RL3_METMJ RecName: Full=50S ribosomal protein L3P gi|125861308|gb|ABN56497.1| LSU ribosomal protein L3P [Methanoculleus marisnigri JR1] Length = 337 Score = 81.4 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 35/141 (24%), Positives = 53/141 (37%), Gaps = 20/141 (14%) Query: 94 VGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G + S VG+ VDVT +T GKG G +KR + H R G+ G Sbjct: 183 LGKEITISGNLEVGEYVDVTAVTTGKGTEGPVKRWGVQVRKRKHSRGGKKRHIGNLGPW- 241 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLI-----------------LVKGCV 195 P V G+MG + T N ++ + I L+KG V Sbjct: 242 HPHHVRWQVPQMGQMGYQQRTEFNKRILKIGADGDEITPAGGFLHYGLVRGPYVLIKGSV 301 Query: 196 PGAKKNSWILVRDSFKSAVNC 216 PG K + +R + + + Sbjct: 302 PGPNKR-LVRIRSAIRQGEHT 321 >gi|293372119|ref|ZP_06618510.1| 50S ribosomal protein L3 domain protein [Bacteroides ovatus SD CMC 3f] gi|292632911|gb|EFF51498.1| 50S ribosomal protein L3 domain protein [Bacteroides ovatus SD CMC 3f] Length = 53 Score = 81.0 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 30/48 (62%) Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 MT V++ +G+ +P TV+ C V +T++K+GY AVQ+G + K Sbjct: 1 MTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEN 48 >gi|297527410|ref|YP_003669434.1| ribosomal protein L3 [Staphylothermus hellenicus DSM 12710] gi|297256326|gb|ADI32535.1| ribosomal protein L3 [Staphylothermus hellenicus DSM 12710] Length = 395 Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 47/130 (36%), Gaps = 21/130 (16%) Query: 94 VGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G+ + F GQ +D+ G+T GKGF G +KR L H R G R Sbjct: 241 LGNYITVDQVFREGQFIDIIGVTKGKGFQGVIKRFGVKELPRWHKHRKGSRK---IGSRS 297 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK------------RGL-----ILVKGCV 195 G+ G +R T N ++ + G+ I+V G Sbjct: 298 PGFGTMSETPQPGQTGFHRRTEYNKRIIKIGVNGWEITPKGGFLGYGIVYGPYIMVYGST 357 Query: 196 PGAKKNSWIL 205 G +K +L Sbjct: 358 IGPRKRLLVL 367 >gi|292656685|ref|YP_003536582.1| 50S ribosomal protein L3 [Haloferax volcanii DS2] gi|291372463|gb|ADE04690.1| ribosomal protein L3 [Haloferax volcanii DS2] Length = 338 Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 52/280 (18%), Positives = 82/280 (29%), Gaps = 73/280 (26%) Query: 4 GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGY------- 46 G K GMT V + +PVTV+ + V R ++ Y Sbjct: 41 GFAGYKAGMTHVMMVNDEADSPHEGMEESVPVTVVETPPMRAVALRAYEQTPYGMKPQTE 100 Query: 47 --------------------------MAV--QVGAGEAKVKNV----------SKPMRGF 68 A+ V AGE V + P + Sbjct: 101 VWAGEFHDELDRVLDLPAEDTFDSDADALREAVEAGEVDDLRVITHTVPSELANVPKKKP 160 Query: 69 FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128 + E D + G F G+ +D G+T GKG G +KR Sbjct: 161 DVMETRVGGGSMVERADFALDLVAEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWG 220 Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------ 182 + H R G+ G +P RV G+ G ++ T N ++ + Sbjct: 221 VQKRKGKHARQGWRRRIGNLGPW-NPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGDDA 279 Query: 183 ----------DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + L+KG +PG K + R + + Sbjct: 280 SVEGGFVNYGEVDGSYALIKGSLPGPNKR-LLRFRPAIRP 318 >gi|260891595|ref|ZP_05902858.1| hypothetical protein GCWU000323_02810 [Leptotrichia hofstadii F0254] gi|260858703|gb|EEX73203.1| ribosomal protein L3 [Leptotrichia hofstadii F0254] Length = 61 Score = 80.6 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59 ++ +K+GMT ++ + + IPVTV+ + +T +K GY A+ + G+ K K Sbjct: 2 ILGKKIGMTQIF-EDEKLIPVTVIEAGTNFITQIKTEEKEGYNAITLAYGDKKEK 55 >gi|14278035|pdb|1GIY|E Chain E, Crystal Structure Of The Ribosome At 5.5 A Resolution. This File, 1giy, Contains The 50s Ribosome Subunit. The 30s Ribosome Subunit, Three Trna, And Mrna Molecules Are In The File 1gix gi|28373724|pdb|1ML5|EE Chain e, Structure Of The E. Coli Ribosomal Termination Complex With Release Factor 2 gi|66361021|pdb|1YL3|E Chain E, Crystal Structure Of 70s Ribosome With Thrs Operator And Trnas. Large Subunit. The Coordinates For The Small Subunit Are In The Pdb Entry 1yl4. gi|88192261|pdb|2B66|E Chain E, 50s Ribosomal Subunit From A Crystal Structure Of Release Factor Rf1, Trnas And Mrna Bound To The Ribosome. This File Contains The 50s Subunit From A Crystal Structure Of Release Factor Rf1, Trnas And Mrna Bound To The Ribosome And Is Described In Remark 400 gi|88192324|pdb|2B9N|E Chain E, 50s Ribosomal Subunit From A Crystal Structure Of Release Factor Rf2, Trnas And Mrna Bound To The Ribosome. This File Contains The 50s Subunit From A Crystal Structure Of Release Factor Rf1, Trnas And Mrna Bound To The Ribosome And Is Described In Remark 400. gi|88192379|pdb|2B9P|E Chain E, 50s Ribosomal Subunit From A Crystal Structure Of The Ribosome In Complex With Trnas And Mrna With A Stop Codon In The A-Site. This File Contains The 50s Subunit From A Crystal Structure Of The Ribosome In Complex With Trnas And Mrna With A Stop Codon In The A-Site And Is Described In Remark 400 Length = 338 Score = 80.6 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 47/128 (36%), Gaps = 17/128 (13%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F G+ DV G+T GKG G +KR + H R G+ G +P RV Sbjct: 192 DIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW-NPSRVRST 250 Query: 161 KKMAGRMGGNRVTVKNLEVVSV----------------DDKRGLILVKGCVPGAKKNSWI 204 G+ G ++ T N ++ + + LVKG VPG K Sbjct: 251 VPQQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKRLVP 310 Query: 205 LVRDSFKS 212 R + + Sbjct: 311 FFRPAVRP 318 >gi|15825944|pdb|1JJ2|B Chain B, Fully Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution gi|20150989|pdb|1KQS|B Chain B, The Haloarcula Marismortui 50s Complexed With A Pretranslocational Intermediate In Protein Synthesis gi|22218923|pdb|1K8A|D Chain D, Co-Crystal Structure Of Carbomycin A Bound To The 50s Ribosomal Subunit Of Haloarcula Marismortui gi|22218957|pdb|1K9M|D Chain D, Co-Crystal Structure Of Tylosin Bound To The 50s Ribosomal Subunit Of Haloarcula Marismortui gi|22219000|pdb|1KD1|D Chain D, Co-Crystal Structure Of Spiramycin Bound To The 50s Ribosomal Subunit Of Haloarcula Marismortui gi|22219327|pdb|1M1K|D Chain D, Co-Crystal Structure Of Azithromycin Bound To The 50s Ribosomal Subunit Of Haloarcula Marismortui gi|24159022|pdb|1M90|D Chain D, Co-Crystal Structure Of Cca-Phe-Caproic Acid-Biotin And Sparsomycin Bound To The 50s Ribosomal Subunit gi|34811119|pdb|1K73|D Chain D, Co-Crystal Structure Of Anisomycin Bound To The 50s Ribosomal Subunit gi|34811149|pdb|1KC8|D Chain D, Co-Crystal Structure Of Blasticidin S Bound To The 50s Ribosomal Subunit gi|34811188|pdb|1N8R|D Chain D, Structure Of Large Ribosomal Subunit In Complex With Virginiamycin M gi|34811218|pdb|1NJI|D Chain D, Structure Of Chloramphenicol Bound To The 50s Ribosomal Subunit gi|37927902|pdb|1Q7Y|D Chain D, Crystal Structure Of Ccdap-Puromycin Bound At The Peptidyl Transferase Center Of The 50s Ribosomal Subunit gi|37927937|pdb|1Q81|D Chain D, Crystal Structure Of Minihelix With 3' Puromycin Bound To A- Site Of The 50s Ribosomal Subunit. gi|37927973|pdb|1Q82|D Chain D, Crystal Structure Of Cc-Puromycin Bound To The A-Site Of The 50s Ribosomal Subunit gi|37928009|pdb|1Q86|D Chain D, Crystal Structure Of Cca-Phe-Cap-Biotin Bound Simultaneously At Half Occupancy To Both The A-Site And P- Site Of The The 50s Ribosomal Subunit. gi|39654674|pdb|1QVF|B Chain B, Structure Of A Deacylated Trna Minihelix Bound To The E Site Of The Large Ribosomal Subunit Of Haloarcula Marismortui gi|39654707|pdb|1QVG|B Chain B, Structure Of Cca Oligonucleotide Bound To The Trna Binding Sites Of The Large Ribosomal Subunit Of Haloarcula Marismortui gi|55670537|pdb|1W2B|B Chain B, Trigger Factor Ribosome Binding Domain In Complex With 50s gi|145580205|pdb|2OTL|B Chain B, Girodazole Bound To The Large Subunit Of Haloarcula Marismortui gi|228311913|pdb|3CXC|B Chain B, The Structure Of An Enhanced Oxazolidinone Inhibitor Bound To The 50s Ribosomal Subunit Of H. Marismortui gi|228312143|pdb|3G4S|B Chain B, Co-Crystal Structure Of Tiamulin Bound To The Large Ribosomal Subunit gi|228312199|pdb|3G6E|B Chain B, Co-Crystal Structure Of Homoharringtonine Bound To The Large Ribosomal Subunit gi|228312235|pdb|3G71|B Chain B, Co-Crystal Structure Of Bruceantin Bound To The Large Ribosomal Subunit Length = 337 Score = 80.6 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 48/128 (37%), Gaps = 18/128 (14%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F G+ DV G+T GKG G +KR + H R G+ G +P RV Sbjct: 192 DIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW-NPSRVRST 250 Query: 161 KKMAGRMGGNRVTVKNLEVVSV----------------DDKRGLILVKGCVPGAKKNSWI 204 G+ G ++ T N ++ + + LVKG VPG K + Sbjct: 251 VPQQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKR-LV 309 Query: 205 LVRDSFKS 212 R + + Sbjct: 310 RFRPAVRP 317 >gi|27066406|pdb|1FFK|B Chain B, Crystal Structure Of The Large Ribosomal Subunit From Haloarcula Marismortui At 2.4 Angstrom Resolution Length = 337 Score = 80.6 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 47/128 (36%), Gaps = 17/128 (13%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F G+ DV G+T GKG G +KR + H R G+ G +P RV Sbjct: 191 DIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW-NPSRVRST 249 Query: 161 KKMAGRMGGNRVTVKNLEVVSV----------------DDKRGLILVKGCVPGAKKNSWI 204 G+ G ++ T N ++ + + LVKG VPG K Sbjct: 250 VPQQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKRLVP 309 Query: 205 LVRDSFKS 212 R + + Sbjct: 310 FFRPAVRP 317 >gi|55378384|ref|YP_136234.1| 50S ribosomal protein L3P [Haloarcula marismortui ATCC 43049] gi|57015335|sp|P20279|RL3_HALMA RecName: Full=50S ribosomal protein L3P; AltName: Full=Hl1; AltName: Full=Hmal3 gi|50513471|pdb|1S72|B Chain B, Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution gi|66360785|pdb|1YHQ|B Chain B, Crystal Structure Of Azithromycin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui gi|66360818|pdb|1YI2|B Chain B, Crystal Structure Of Erythromycin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui gi|66360851|pdb|1YIJ|B Chain B, Crystal Structure Of Telithromycin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui gi|66360884|pdb|1YIT|B Chain B, Crystal Structure Of Virginiamycin M And S Bound To The 50s Ribosomal Subunit Of Haloarcula Marismortui gi|66360917|pdb|1YJ9|B Chain B, Crystal Structure Of The Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui Containing A Three Residue Deletion In L22 gi|66360950|pdb|1YJN|B Chain B, Crystal Structure Of Clindamycin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui gi|66360983|pdb|1YJW|B Chain B, Crystal Structure Of Quinupristin Bound To The G2099a Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui gi|83753127|pdb|1VQ4|B Chain B, The Structure Of The Transition State Analogue "daa" Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui gi|83753159|pdb|1VQ5|B Chain B, The Structure Of The Transition State Analogue "raa" Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui gi|83753191|pdb|1VQ6|B Chain B, The Structure Of C-Hpmn And Cca-Phe-Cap-Bio Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui gi|83753223|pdb|1VQ7|B Chain B, The Structure Of The Transition State Analogue "dca" Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui gi|83753254|pdb|1VQ8|B Chain B, The Structure Of Ccda-Phe-Cap-Bio And The Antibiotic Sparsomycin Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui gi|83753286|pdb|1VQ9|B Chain B, The Structure Of Cca-Phe-Cap-Bio And The Antibiotic Sparsomycin Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui gi|83753317|pdb|1VQK|B Chain B, The Structure Of Ccda-Phe-Cap-Bio Bound To The A Site Of The Ribosomal Subunit Of Haloarcula Marismortui gi|83753348|pdb|1VQL|B Chain B, The Structure Of The Transition State Analogue "dcsn" Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui gi|83753379|pdb|1VQM|B Chain B, The Structure Of The Transition State Analogue "dan" Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui gi|83753411|pdb|1VQN|B Chain B, The Structure Of Cc-Hpmn And Cca-Phe-Cap-Bio Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui gi|83753442|pdb|1VQO|B Chain B, The Structure Of Ccpmn Bound To The Large Ribosomal Subunit Haloarcula Marismortui gi|83753474|pdb|1VQP|B Chain B, The Structure Of The Transition State Analogue "rap" Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui gi|145580174|pdb|2OTJ|B Chain B, 13-Deoxytedanolide Bound To The Large Subunit Of Haloarcula Marismortui gi|171848838|pdb|2QA4|B Chain B, A More Complete Structure Of The The L7L12 STALK OF THE Haloarcula Marismortui 50s Large Ribosomal Subunit gi|188596003|pdb|3CC2|B Chain B, The Refined Crystal Structure Of The Haloarcula Marismortui Large Ribosomal Subunit At 2.4 Angstrom Resolution With Rrna Sequence For The 23s Rrna And Genome-Derived Sequences For R-Proteins gi|188596034|pdb|3CC4|B Chain B, Co-Crystal Structure Of Anisomycin Bound To The 50s Ribosomal Subunit gi|188596065|pdb|3CC7|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation C2487u gi|188596096|pdb|3CCE|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation U2535a gi|188596127|pdb|3CCJ|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation C2534u gi|188596158|pdb|3CCL|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation U2535c. Density For Anisomycin Is Visible But Not Included In Model. gi|188596189|pdb|3CCM|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2611u gi|188596220|pdb|3CCQ|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation A2488u gi|188596251|pdb|3CCR|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation A2488c. Density For Anisomycin Is Visible But Not Included In The Model. gi|188596282|pdb|3CCS|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2482a gi|188596313|pdb|3CCU|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2482c gi|188596344|pdb|3CCV|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit: 23s Rrna Mutation G2616a gi|188596375|pdb|3CD6|B Chain B, Co-Cystal Of Large Ribosomal Subunit Mutant G2616a With Cc- Puromycin gi|194368706|pdb|3CPW|B Chain B, The Structure Of The Antibiotic Linezolid Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui gi|206581909|pdb|3CMA|B Chain B, The Structure Of Cca And Cca-Phe-Cap-Bio Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui gi|206581942|pdb|3CME|B Chain B, The Structure Of Ca And Cca-Phe-Cap-Bio Bound To The Large Ribosomal Subunit Of Haloarcula Marismortui gi|208435496|pdb|2QEX|B Chain B, Negamycin Binds To The Wall Of The Nascent Chain Exit Tunnel Of The 50s Ribosomal Subunit gi|290790037|pdb|3I55|B Chain B, Co-Crystal Structure Of Mycalamide A Bound To The Large Ribosomal Subunit gi|290790068|pdb|3I56|B Chain B, Co-Crystal Structure Of Triacetyloleandomcyin Bound To The Large Ribosomal Subunit gi|55231109|gb|AAV46528.1| 50S ribosomal protein L3 [Haloarcula marismortui ATCC 43049] Length = 338 Score = 80.6 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 48/128 (37%), Gaps = 18/128 (14%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F G+ DV G+T GKG G +KR + H R G+ G +P RV Sbjct: 193 DIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW-NPSRVRST 251 Query: 161 KKMAGRMGGNRVTVKNLEVVSV----------------DDKRGLILVKGCVPGAKKNSWI 204 G+ G ++ T N ++ + + LVKG VPG K + Sbjct: 252 VPQQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKR-LV 310 Query: 205 LVRDSFKS 212 R + + Sbjct: 311 RFRPAVRP 318 >gi|298674802|ref|YP_003726552.1| 50S ribosomal protein L3 [Methanohalobium evestigatum Z-7303] gi|298287790|gb|ADI73756.1| ribosomal protein L3 [Methanohalobium evestigatum Z-7303] Length = 337 Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 36/141 (25%), Positives = 58/141 (41%), Gaps = 20/141 (14%) Query: 94 VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G+ S F G +VD+ +T GKG G +KR + H + S R G+ G Sbjct: 183 LGTKISITDVFNPGGIVDIAAITTGKGTQGPVKRWGIQIAKHKHNRAGSARQVGTLGPW- 241 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK-----------------RGLILVKGCV 195 P + G+MG ++ T N ++ V ++ +L+KG V Sbjct: 242 HPAHISWRVPQMGQMGYHQRTEYNKRIIKVSNEGSEINPDGGFLNYGLVRGNYVLIKGSV 301 Query: 196 PGAKKNSWILVRDSFKSAVNC 216 PG K + RD +S V+ Sbjct: 302 PGPSKR-LVRFRDPIRSKVSS 321 >gi|116755016|ref|YP_844134.1| 50S ribosomal protein L3P [Methanosaeta thermophila PT] gi|121693633|sp|A0B9X0|RL3_METTP RecName: Full=50S ribosomal protein L3P gi|116666467|gb|ABK15494.1| LSU ribosomal protein L3P [Methanosaeta thermophila PT] Length = 335 Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 59/145 (40%), Gaps = 20/145 (13%) Query: 94 VGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +GS + S F VG+ +DV+ +T GKG G +KR + H + R G+ G Sbjct: 179 LGSQVAVSNIFNVGEWIDVSAVTKGKGTQGPVKRWGIMLQKRKHSRTGKLRHVGNLGPW- 237 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD-----------------KRGLILVKGCV 195 P R+ G+ G ++ T N ++++ + +L+KG V Sbjct: 238 HPARISWRVPQLGQTGYHQRTEFNKRIMAIGTNGTDITPDGGFVGYGVVRNEYMLIKGSV 297 Query: 196 PGAKKNSWILVRDSFKSAVNCKGKV 220 PG K + +R + + K Sbjct: 298 PGPVKR-LVRMRRAIRPGAAFAPKA 321 >gi|218884488|ref|YP_002428870.1| 50S ribosomal protein L3P [Desulfurococcus kamchatkensis 1221n] gi|218766104|gb|ACL11503.1| 50S ribosomal protein L3P [Desulfurococcus kamchatkensis 1221n] Length = 396 Score = 80.6 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 38/134 (28%), Positives = 51/134 (38%), Gaps = 20/134 (14%) Query: 89 DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148 + + G V + F GQ VDV G+T GKGF G +KR L H R Sbjct: 237 AEGILGGYVRASDVFMEGQFVDVIGVTKGKGFQGVVKRFGVKELPRWHKHRKGSRK---I 293 Query: 149 GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS-------VDDKRG----------LILV 191 G R AG+MG +R T N ++ + + G I++ Sbjct: 294 GARSPGFGTMSEPPQAGQMGFHRRTEYNKRILKMGLNGLEITIEGGFLHYGLVYGPYIML 353 Query: 192 KGCVPGAKKNSWIL 205 KG V G K IL Sbjct: 354 KGTVFGPAKRMLIL 367 >gi|313111417|ref|ZP_07797222.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa 39016] gi|310883724|gb|EFQ42318.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa 39016] Length = 57 Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 29/56 (51%), Positives = 41/56 (73%), Gaps = 1/56 (1%) Query: 157 VFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 +FK KKM+G +G RVTV++LE+V VD +R L+LVKG VPGA ++VR + K+ Sbjct: 1 MFKGKKMSGHLGAERVTVQSLEIVRVDAERNLLLVKGAVPGATGGD-VIVRPAAKA 55 >gi|48477712|ref|YP_023418.1| 50S ribosomal protein L3P [Picrophilus torridus DSM 9790] gi|74567866|sp|Q6L1C7|RL3_PICTO RecName: Full=50S ribosomal protein L3P gi|48430360|gb|AAT43225.1| large subunit ribosomal protein L3P [Picrophilus torridus DSM 9790] Length = 329 Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 59/274 (21%), Positives = 98/274 (35%), Gaps = 69/274 (25%) Query: 7 ARKLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE- 55 K+GMT + ++ G+ I PVTV+ + V+ R + G ++V + E Sbjct: 44 GYKVGMTHIQMVDYRKNSVTAGQVIMAPVTVVEVPPLTVMSIRYYAR-GDNGLEVISEEW 102 Query: 56 ---------AKVKNVSKPMRGFFSS---------------VNVSPKKKLFEFRVQKDDDL 91 ++ +++ +G V+ P K F ++ Sbjct: 103 AENIDKDVLRRINKINRHKKGIEVKDVDDVRLMVHTNPQLVSGVPSKTPEIFEIRIGGST 162 Query: 92 LP---------VGSVFSPSYF-TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSIS 141 + +GS S S F G VDV +T GKGF G +KR L + Sbjct: 163 IENRIKYAKERLGSNISFSDFSKPGNFVDVIAVTKGKGFQGVVKRFGVKLLPRKNRKHR- 221 Query: 142 HRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK---------------- 185 R G+ G P V AG++G ++ T+ N+ ++ D K Sbjct: 222 -RMIGTLGPW-HPDWVRNTVPQAGQVGFHQRTIHNIRIIKFDTKDHVDDINVKGGFLNYG 279 Query: 186 ---RGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216 +L+ G VPG K I +RD + Sbjct: 280 IVRNDYVLLFGSVPGPAKR-LIKMRDPARQTRPA 312 >gi|15790632|ref|NP_280456.1| 50S ribosomal protein L3P [Halobacterium sp. NRC-1] gi|169236371|ref|YP_001689571.1| 50S ribosomal protein L3P [Halobacterium salinarum R1] gi|42559695|sp|Q9HPD4|RL3_HALSA RecName: Full=50S ribosomal protein L3P gi|226725182|sp|B0R656|RL3_HALS3 RecName: Full=50S ribosomal protein L3P gi|10581159|gb|AAG19936.1| 50S ribosomal protein L13P [Halobacterium sp. NRC-1] gi|167727437|emb|CAP14225.1| ribosomal protein L3 [Halobacterium salinarum R1] Length = 335 Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 18/128 (14%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F G+ D G+T GKG G +KR + H R G+ G +P RV Sbjct: 190 DVFRAGEFTDAAGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW-NPSRVRST 248 Query: 161 KKMAGRMGGNRVTVKNLEVVSVD-----------DKRGLI-----LVKGCVPGAKKNSWI 204 G+ G ++ T N ++ ++ G + LVKG VPG ++ + Sbjct: 249 VPQQGQTGYHQRTELNKRLIDINDGDEPTPDGGFPNYGEVDGPYTLVKGSVPGPEQR-LV 307 Query: 205 LVRDSFKS 212 R + + Sbjct: 308 RFRPAVRP 315 >gi|156937755|ref|YP_001435551.1| 50S ribosomal protein L3P [Ignicoccus hospitalis KIN4/I] gi|156566739|gb|ABU82144.1| LSU ribosomal protein L3P [Ignicoccus hospitalis KIN4/I] Length = 358 Score = 79.8 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 33/131 (25%), Positives = 48/131 (36%), Gaps = 21/131 (16%) Query: 93 PVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151 +G + G+ VDV G+T GKGF G +KR L H R G R Sbjct: 203 KLGQLVDVEEVIEAGKFVDVIGVTKGKGFQGVIKRFGVKELPKWHKHRKGSRR---VGAR 259 Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVV-------SVDDKRG----------LILVKGC 194 G+MG +R T N V+ ++ + G +++KG Sbjct: 260 SWGKGTSSYVPQPGQMGYHRRTDYNKRVLMISDDPSKINVEGGWLHYGLVKSKYVVLKGS 319 Query: 195 VPGAKKNSWIL 205 V G K I+ Sbjct: 320 VFGPPKRPIIM 330 Score = 34.7 bits (79), Expect = 7.8, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 13/52 (25%) Query: 6 VARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYM 47 + K+GMT V I+ R +PVTV+ V+ R GY Sbjct: 44 LGYKVGMTHVIMIDDREHVDTAGQEIFVPVTVIETPPMVVLGARV---YGYD 92 >gi|257387876|ref|YP_003177649.1| 50S ribosomal protein L3P [Halomicrobium mukohataei DSM 12286] gi|257170183|gb|ACV47942.1| ribosomal protein L3 [Halomicrobium mukohataei DSM 12286] Length = 338 Score = 79.8 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 51/283 (18%), Positives = 81/283 (28%), Gaps = 79/283 (27%) Query: 4 GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMA----- 48 G K GMT V + +PVTV+ + V R + Y Sbjct: 41 GFAGYKAGMTHVTLVNDEPNSPREGMEETVPVTVVETPPVRAVAVRAYEDTPYGKRPLTE 100 Query: 49 ----------------------------------------VQVGAGEAKVKNVSKPMRG- 67 V+V + + P + Sbjct: 101 VWTDEFHSELDRALDLPEGHDADAAEEQVRDALDAGDIADVRVVTHTVPDELANVPKKKP 160 Query: 68 --FFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 + V FE ++ DD G F G+ D+ +T GKG G +K Sbjct: 161 DVMETRVGGGSLSDRFEHALELVDD---GGEHAMNDVFRAGEYADIAAVTKGKGTQGPVK 217 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--- 182 R + H R G+ G +P RV G+ G ++ T N ++ + Sbjct: 218 RWGVQKRKGKHARQGWRRRIGNLGPW-NPSRVRSTVPQQGQTGYHQRTELNKRLIDIGDG 276 Query: 183 -------------DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + LVKG VPG + + R + + Sbjct: 277 DDASVDGGFVNYGEVDGPYTLVKGSVPGPDQR-LVRFRPAVRP 318 >gi|296090209|emb|CBI40028.3| unnamed protein product [Vitis vinifera] Length = 99 Score = 79.8 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 37/81 (45%), Positives = 44/81 (54%), Gaps = 1/81 (1%) Query: 77 KKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATH 136 + L EFR+ D P + F G LVDV+G+TIGKGF G +KRHNF TH Sbjct: 1 MRHLQEFRLVSVDGFEPNQKLVFEELFKEGDLVDVSGITIGKGFQGGIKRHNFRRGPMTH 60 Query: 137 GVSISHRSHGSTGCRQDPGRV 157 G S SHR+ GS G PG Sbjct: 61 G-SKSHRALGSIGAGTTPGHP 80 >gi|148801|gb|AAA86859.1| ribosomal protein L3 [Haloarcula marismortui] Length = 338 Score = 79.4 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 48/128 (37%), Gaps = 18/128 (14%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F G+ DV G+T GKG G +KR + H R G+ G +P RV Sbjct: 193 DIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW-NPSRVRST 251 Query: 161 KKMAGRMGGNRVTVKNLEVVSV----------------DDKRGLILVKGCVPGAKKNSWI 204 G+ G ++ T N ++ + + LVKG VPG K + Sbjct: 252 VPQQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSVPGPDKR-LV 310 Query: 205 LVRDSFKS 212 R + + Sbjct: 311 PFRPAVRP 318 >gi|13541155|ref|NP_110843.1| 50S ribosomal protein L3P [Thermoplasma volcanium GSS1] gi|42559678|sp|Q97BX7|RL3_THEVO RecName: Full=50S ribosomal protein L3P gi|14324543|dbj|BAB59470.1| ribosomal protein large subunit L3 [Thermoplasma volcanium GSS1] Length = 331 Score = 79.0 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 65/283 (22%), Positives = 97/283 (34%), Gaps = 81/283 (28%) Query: 4 GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKN--GYMAVQV 51 G K+GMT V ++ R+ +PVTV+ + V+ R D++ G M V Sbjct: 41 GFAGFKVGMTHVEMVDYRKTSVTAGQPIFVPVTVIEVPPLDVIGIRLYDEDEEGNMVVVY 100 Query: 52 ----------------GAGEAKVKNV-----------------------SKPMRGFFSSV 72 E K K V KP Sbjct: 101 EKWTQNLDKELFKKITTFKEVKEKPVPETYADVRLIVATRNKDVPGIPSKKPEIFELRIG 160 Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF-TVGQLVDVTGMTIGKGFSGAMKRHNFGG 131 + K+ FE+ +G F G+ VDV +T GKGF+G ++R Sbjct: 161 GGNSVKERFEYATAH------LGKTIRFEDFSKPGKFVDVLSVTKGKGFTGHVQRFGVKL 214 Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS---------V 182 L + R G+ G P V AG+MG + T+ N+ V+ + Sbjct: 215 LPRKNRKHR--RMIGTLGPW-HPDWVRNTVPQAGQMGYQQRTISNVRVLKYSKGEDADTI 271 Query: 183 DDKRGLI---LVK-------GCVPGAKKNSWILVRDSFKSAVN 215 + + G + LVK G VPG K I +RD + V Sbjct: 272 NVRGGFLHYGLVKNDYVLLFGSVPGPAKR-LIKMRDPARQKVP 313 >gi|115641910|ref|XP_001204299.1| PREDICTED: similar to Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3), partial [Strongylocentrotus purpuratus] gi|115660375|ref|XP_001200456.1| PREDICTED: similar to Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3), partial [Strongylocentrotus purpuratus] Length = 83 Score = 78.7 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 32/83 (38%), Positives = 43/83 (51%) Query: 96 SVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 + ++F G VD+ TI KGF G MKR G A+HG + +HR G +G DPG Sbjct: 1 TPLYAAHFRPGMYVDIAAKTIDKGFQGVMKRWGMKGQPASHGATKTHRKMGGSGGGGDPG 60 Query: 156 RVFKNKKMAGRMGGNRVTVKNLE 178 R++ KKM G MG L+ Sbjct: 61 RIWPGKKMPGFMGDKLRWTFGLK 83 >gi|260222805|emb|CBA32730.1| hypothetical protein Csp_D33610 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 65 Score = 78.7 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 1/62 (1%) Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 PGRVF K+M G +G VT +NL+V+ VD+ R L+L+KG +PG+ K ++ VR + K+ Sbjct: 1 PGRVFPGKRMTGHLGDATVTTQNLDVIRVDEARQLLLIKGAIPGS-KGGFVTVRPAVKAK 59 Query: 214 VN 215 + Sbjct: 60 AS 61 >gi|289579898|ref|YP_003478364.1| ribosomal protein L3 [Natrialba magadii ATCC 43099] gi|289529451|gb|ADD03802.1| ribosomal protein L3 [Natrialba magadii ATCC 43099] Length = 340 Score = 78.3 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 32/136 (23%), Positives = 51/136 (37%), Gaps = 18/136 (13%) Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153 G F G+ VD +G+T GKG G +KR + H R G+ G + Sbjct: 188 GGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW-N 246 Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV----------------DDKRGLILVKGCVPG 197 P RV G+ G ++ T N +V + + +L+KG +PG Sbjct: 247 PSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADATVDGGFVNYGEVDGPHVLIKGSLPG 306 Query: 198 AKKNSWILVRDSFKSA 213 K + R + + Sbjct: 307 PNKR-LVRFRPAIRPG 321 >gi|170516812|gb|ACB15214.1| ribosomal protein L3 [uncultured marine group II euryarchaeote DeepAnt-15E7] Length = 358 Score = 77.5 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 22/144 (15%) Query: 87 KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146 + G++ + GQ +DV G+T GKG+ GA+KR L +H S R G Sbjct: 199 DWAEERLGGAITLDDVYETGQEIDVVGVTKGKGWQGAIKRWGIKLL--SHKNSKRRRQGG 256 Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-DDKRG-----------------L 188 + G G V K + AG++G + T N ++ V + + Sbjct: 257 NMGDFGT-GYVRKTIRQAGQVGYHNRTELNKRILRVSNPEESDITPSGGFLNYGEVTNPY 315 Query: 189 ILVKGCVPGAKKNSWILVRDSFKS 212 ++++G +PG K + RD+ + Sbjct: 316 MIIQGSLPGPSKR-ILRFRDAIRP 338 >gi|73667662|ref|YP_303677.1| 50S ribosomal protein L3P [Methanosarcina barkeri str. Fusaro] gi|109893521|sp|Q46G95|RL3_METBF RecName: Full=50S ribosomal protein L3P gi|72394824|gb|AAZ69097.1| LSU ribosomal protein L3P [Methanosarcina barkeri str. Fusaro] Length = 337 Score = 77.5 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 54/288 (18%), Positives = 95/288 (32%), Gaps = 72/288 (25%) Query: 4 GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKN--GYMAVQ- 50 G K+GMT V ++ + +PVT++ +V R ++ G A+ Sbjct: 41 GFAGYKVGMTHVIMVDDTKNSLTQGMEISVPVTIIETPAIRVAAIRAYAEDTAGEKAIAE 100 Query: 51 ----------------------------VGA----GEAKVKN-----VSKPMRGFFSSV- 72 +G G+ + K + G Sbjct: 101 VWATDLDPELKRRIPVPKGDNMAETLGNIGKMIEEGKVSDIRAVTYTLPKSLTGVPKKTP 160 Query: 73 -NVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130 + + + + +G++ S F G L+D +TIGKG G KR Sbjct: 161 DIMESGISARDLNTKFEYAKSILGTLVSITDVFKTGTLIDTAAITIGKGTQGPAKRWGIQ 220 Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--DDKR-- 186 ++ H S R G+ G RV G+ G ++ T N ++ + D + Sbjct: 221 LMKGKHSRQGSLRQIGTLGGFG-LRRVSWRVPQMGQTGYHQRTEFNKRILKIGSDGEEVT 279 Query: 187 -------------GLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 +L+KG VPG K I +RD ++ G+ + Sbjct: 280 PEGGFINYGLVRGDYVLIKGSVPGPSKR-LIRLRDPIRAKKADLGEPN 326 >gi|296242583|ref|YP_003650070.1| 50S ribosomal protein L3P [Thermosphaera aggregans DSM 11486] gi|296095167|gb|ADG91118.1| LSU ribosomal protein L3P [Thermosphaera aggregans DSM 11486] Length = 395 Score = 77.1 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 50/130 (38%), Gaps = 21/130 (16%) Query: 94 VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G + + FT GQ +DV G+T GKGF G +KR L H R G R Sbjct: 241 LGGLVTVRDVFTEGQFIDVIGVTKGKGFQGVVKRFGVKVLPRWHKHRKGARK---IGSRS 297 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD------------DKRGL-----ILVKGCV 195 AG+ G +R T N ++ + GL +++KG V Sbjct: 298 PAFGTMSEPPQAGQTGFHRRTDYNKRILRIGFNGLEVTPSGGFLHYGLVYGPYLMLKGTV 357 Query: 196 PGAKKNSWIL 205 G K IL Sbjct: 358 FGPAKRLLIL 367 >gi|328725484|ref|XP_003248496.1| PREDICTED: 50S ribosomal protein L4-like [Acyrthosiphon pisum] Length = 267 Score = 76.7 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 4/60 (6%) Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKG 193 +HG S HR GS G D +VFK K++ GRMGGN VT++NLEVV VD + VKG Sbjct: 1 MSHG-SRYHRGSGSMGMASDASKVFKGKELPGRMGGNTVTMQNLEVVKVDAENN---VKG 56 >gi|159040903|ref|YP_001540155.1| 50S ribosomal protein L3P [Caldivirga maquilingensis IC-167] gi|212288253|sp|A8MB75|RL3_CALMQ RecName: Full=50S ribosomal protein L3P gi|157919738|gb|ABW01165.1| ribosomal protein L3 [Caldivirga maquilingensis IC-167] Length = 347 Score = 76.7 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 57/140 (40%), Gaps = 22/140 (15%) Query: 94 VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G P F GQLVDV G+T GKG G +KR L H R G+ G + Sbjct: 189 LGKEVKPTDVFKPGQLVDVIGVTKGKGTQGVIKRFGVKELPRWHKHRKGSRRTGTVGPK- 247 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-----------------DDKRGLILVKGCV 195 P ++ +M G+MG +R T N ++ + + G +L++G Sbjct: 248 -PAVMYTQPRM-GQMGFHRRTEYNKRILKISDNGSEITPKGGFKHYGIVRSGYMLIEGST 305 Query: 196 PGAKKNSWILVRDSFKSAVN 215 PG K I R + N Sbjct: 306 PGVVKR-LIAFRYPIRPPFN 324 >gi|332158024|ref|YP_004423303.1| 50S ribosomal protein L3P [Pyrococcus sp. NA2] gi|331033487|gb|AEC51299.1| 50S ribosomal protein L3P [Pyrococcus sp. NA2] Length = 362 Score = 76.7 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 54/148 (36%), Gaps = 30/148 (20%) Query: 94 VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G G+L+DV +T GKG G +KR H S R GS G Sbjct: 201 LGKEIRVGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKL--RAHKDSKGRRKVGSIGPW- 257 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL------------------------ 188 P RV MAG+MG + T N ++++ + L Sbjct: 258 HPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGKLVIDGNEIEITPKGGFPHYGIVRSD 317 Query: 189 -ILVKGCVPGAKKNSWILVRDSFKSAVN 215 +++ G VPG K I VR + + Sbjct: 318 FMMIAGSVPGPVKR-IIRVRPAIRPPKK 344 >gi|193084205|gb|ACF09869.1| ribosomal protein L3 [uncultured marine group II euryarchaeote KM3-136-D10] Length = 342 Score = 76.7 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 23/142 (16%) Query: 90 DLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148 +G F+ G +DV +T GKG+ G++KR L +H S R G+ Sbjct: 185 AEERLGQTLKVSDVFSNGNDLDVIAVTKGKGWQGSIKRWGIKLL--SHKNSKRRRQGGNM 242 Query: 149 GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------DDKRGLIL 190 G G V K + AG+ G ++ T N +V+ + + I+ Sbjct: 243 GDFGT-GYVRKTIRQAGQTGYHQRTEYNKKVIRISSPDEDEVTPDGGFLRYGEVTNDYII 301 Query: 191 VKGCVPGAKKNSWILVRDSFKS 212 V+G +PG K + R+S + Sbjct: 302 VQGSLPGPSKR-LLRFRESVRP 322 >gi|14591535|ref|NP_143617.1| 50S ribosomal protein L3P [Pyrococcus horikoshii OT3] gi|6094075|sp|O59418|RL3_PYRHO RecName: Full=50S ribosomal protein L3P gi|3258212|dbj|BAA30895.1| 362aa long hypothetical 50S ribosomal protein L3 [Pyrococcus horikoshii OT3] Length = 362 Score = 76.0 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 30/149 (20%) Query: 93 PVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151 +G G+L+DV +T GKG G +KR H S R GS G Sbjct: 200 KLGKEIRVGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKL--RAHKDSKGRRKVGSIGPW 257 Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL----------------------- 188 P RV MAG+MG + T N ++++ + L Sbjct: 258 -HPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGKLVIDGNEIEITPKGGFPHYGIVRG 316 Query: 189 --ILVKGCVPGAKKNSWILVRDSFKSAVN 215 +++ G VPGA K I VR + + Sbjct: 317 DFMMIAGSVPGAIKR-IIRVRPAIRPPKK 344 >gi|18978197|ref|NP_579554.1| 50S ribosomal protein L3P [Pyrococcus furiosus DSM 3638] gi|42559663|sp|Q8TZZ8|RL3_PYRFU RecName: Full=50S ribosomal protein L3P gi|18894006|gb|AAL81949.1| LSU ribosomal protein L3P [Pyrococcus furiosus DSM 3638] Length = 365 Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 67/190 (35%), Gaps = 33/190 (17%) Query: 55 EAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP--VGSVFSP-SYFTVGQLVDV 111 + + ++P + + V++ + + +G G+L+DV Sbjct: 162 DVRAIVATQPWVIKLKKKPEVMEYAIGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLDV 221 Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171 +T GKG G +KR H S R GS G P RV MAG+MG + Sbjct: 222 IAVTKGKGTQGPVKRWGIKL--RAHKDSKGRRKVGSIGPW-HPARVMWTVPMAGQMGFHH 278 Query: 172 VTVKNLEVVSV----------DDK----------------RGLILVKGCVPGAKKNSWIL 205 T N ++++ + + +++ G VPGA K I Sbjct: 279 RTELNKRLIAIGENGKLKLDENTEIEITPKGGFPHYGIVRSDFMMIAGSVPGAIKR-IIR 337 Query: 206 VRDSFKSAVN 215 VR + + Sbjct: 338 VRPAIRPPKK 347 >gi|14520558|ref|NP_126033.1| 50S ribosomal protein L3P [Pyrococcus abyssi GE5] gi|9910846|sp|Q9V1T5|RL3_PYRAB RecName: Full=50S ribosomal protein L3P gi|5457774|emb|CAB49264.1| rpl3P LSU ribosomal protein L3P [Pyrococcus abyssi GE5] Length = 361 Score = 76.0 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 37/149 (24%), Positives = 54/149 (36%), Gaps = 30/149 (20%) Query: 93 PVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151 +G G+L+DV +T GKG G +KR H S R GS G Sbjct: 199 KLGKELRVGEVLKEGELLDVIAVTKGKGTQGPVKRWGIKL--RAHKDSKGRRKVGSIGPW 256 Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-------------------------DDKR 186 P RV MAG+MG + T N ++++ + Sbjct: 257 -HPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGKLVIDGNEIEITPKGGFPHYGIVRS 315 Query: 187 GLILVKGCVPGAKKNSWILVRDSFKSAVN 215 +++ G VPGA K I VR + + Sbjct: 316 DFMMIAGSVPGAIKR-IIRVRPAIRPPKK 343 >gi|284165492|ref|YP_003403771.1| ribosomal protein L3 [Haloterrigena turkmenica DSM 5511] gi|284015147|gb|ADB61098.1| ribosomal protein L3 [Haloterrigena turkmenica DSM 5511] Length = 339 Score = 75.2 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 32/136 (23%), Positives = 52/136 (38%), Gaps = 18/136 (13%) Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153 G F G+ VD +G+T GKG G +KR + H R G+ G + Sbjct: 187 GGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPW-N 245 Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSVD------DKRGLI----------LVKGCVPG 197 P RV G+ G ++ T N +V + G + L+KG +PG Sbjct: 246 PSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADATVDGGFVNYGEVDGPHALIKGSLPG 305 Query: 198 AKKNSWILVRDSFKSA 213 ++ + R + + Sbjct: 306 PQQR-LVRFRPAIRPG 320 >gi|212223211|ref|YP_002306447.1| 50S ribosomal protein L3P [Thermococcus onnurineus NA1] gi|226730581|sp|B6YSL3|RL3_THEON RecName: Full=50S ribosomal protein L3P gi|212008168|gb|ACJ15550.1| LSU ribosomal protein L3P [Thermococcus onnurineus NA1] Length = 347 Score = 74.8 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 57/293 (19%), Positives = 92/293 (31%), Gaps = 84/293 (28%) Query: 4 GVVARKLGMTCVYNIE-------GRRI--PVTVLHLDNCQV------------------- 35 G K GMT + I+ G+ I PVTV+ + V Sbjct: 40 GFAGYKAGMTHILMIDDRPGLTKGKEIFMPVTVVEVPPLFVYGIRAYRQGYLGLETATEV 99 Query: 36 ----------VVHRTLDKNGYM--AVQ---------VGAGEAKVKNVSKPMRGFFSSVNV 74 +TL K+ Y A Q V GE + + + + Sbjct: 100 WFHELNDYVKRRIKTLPKD-YNEEAFQAKLGQLEDLVNDGEIVDVRLLVHTQPWLIKLKK 158 Query: 75 SPKKKLFEFRVQK-----DDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHN 128 P+ + D +G G+L+DV +T GKG G +KR Sbjct: 159 KPEVMEYAIGGDDVKAKFDYAKEKIGKELRASEVLHEGELLDVIAVTKGKGTQGPVKRWG 218 Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV--------V 180 + R G+ G P RV AG+MG + T N + + Sbjct: 219 IKIQFHKAQRAGKGRHVGNLGPW-HPTRVMWTVPQAGQMGFHHRTEFNKRLIAIGENGKL 277 Query: 181 SVDDKRGL------------------ILVKGCVPGAKKNSWILVRDSFKSAVN 215 +D+K + ++++G +PG+ K I VR + + Sbjct: 278 KLDEKNEIEITPKGGFPHYGIIRSDFLMIQGTIPGSFKR-IIRVRPAIRPPKK 329 >gi|242398279|ref|YP_002993703.1| 50S ribosomal protein L3P [Thermococcus sibiricus MM 739] gi|259709744|sp|C6A159|RL3_THESM RecName: Full=50S ribosomal protein L3P gi|242264672|gb|ACS89354.1| 50S ribosomal protein L3P [Thermococcus sibiricus MM 739] Length = 359 Score = 74.4 bits (182), Expect = 9e-12, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 52/149 (34%), Gaps = 30/149 (20%) Query: 93 PVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151 +G G+L+D+ +T GKG G +KR +H S R + G Sbjct: 197 KLGKEIRVGEILQEGELLDIVAVTKGKGTQGPVKRWGVKL--TSHKDSKGRRKVATIGPW 254 Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD-------------------------DKR 186 P RV AG+MG + T N ++ + K Sbjct: 255 -HPARVMWTVPRAGQMGFHHRTEFNKRLLRIGENGKLTLNGEKIEITPNGGFPHYGVVKN 313 Query: 187 GLILVKGCVPGAKKNSWILVRDSFKSAVN 215 I++ G +PGA K I +R + + Sbjct: 314 DFIMIAGTIPGAIKR-IIRMRPAVRPPAK 341 >gi|193083756|gb|ACF09443.1| ribosomal protein L3 [uncultured marine group II euryarchaeote SAT1000-15-B12] Length = 358 Score = 74.0 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 23/139 (16%) Query: 93 PVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151 +G S + GQ +DV G+T GKG+ G++KR L +H S R G+ G Sbjct: 204 KLGGEISLDDVYQTGQEIDVVGITKGKGWQGSIKRWGIKLL--SHKNSKRRRQGGNMGDF 261 Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-DDKRG-----------------LILVKG 193 G V K + AG++G ++ T N ++ + + + ++++G Sbjct: 262 GT-GYVRKTIRQAGQVGYHQRTELNKRILRISNPEESDITPAGGFLNYGEVTNPYMIIQG 320 Query: 194 CVPGAKKNSWILVRDSFKS 212 +PG K R++ +S Sbjct: 321 SLPGPAKRML-RFREAIRS 338 >gi|315229856|ref|YP_004070292.1| 50S ribosomal protein L3e (L3p) [Thermococcus barophilus MP] gi|315182884|gb|ADT83069.1| LSU ribosomal protein L3e (L3p) [Thermococcus barophilus MP] Length = 346 Score = 72.9 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 52/292 (17%), Positives = 87/292 (29%), Gaps = 83/292 (28%) Query: 4 GVVARKLGMTCVYNIE-------GRRI--PVTVLHLDNCQVVVHRTLDKNGYMAVQVG-- 52 G K GMT + I+ G+ I PVT++ V R K GY+ ++ Sbjct: 40 GFAGYKAGMTHILMIDDRPGLTKGKEIFMPVTIVETPPMVVFGIR-AYKQGYLGLETATE 98 Query: 53 --------------------------------------AGEAKVKNVSKPMRGFFSSVNV 74 +GE + + Sbjct: 99 VWIPNLNPDLKRRIKTLPKNYDEGAFQQKLGELEDLVKSGEIVEVRALVHTQPRLIKLKK 158 Query: 75 SPKKKLFEFRVQKDDDLL-----PVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHN 128 P+ + + +D +G G+L+DV +T GKG G +KR Sbjct: 159 KPEVMEYAVGGKSVEDKFAYLKEKLGKEIRAKEVLKEGELLDVIAVTKGKGTQGPVKRWG 218 Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------ 182 + R G+ G P RV AG+MG + T N ++++ Sbjct: 219 IKIQFHKAQRAGKGRHVGNLGPW-HPARVMWTVPQAGQMGFHHRTEFNKRLIAIGENGFL 277 Query: 183 -------------------DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 + +++ G VPGA K + VR + + Sbjct: 278 ELNGNKIEITPKGGFPHYGIVRSDFLMIAGSVPGAIKR-IVRVRPAIRPPAK 328 >gi|254173063|ref|ZP_04879737.1| ribosomal protein L3 [Thermococcus sp. AM4] gi|214033219|gb|EEB74047.1| ribosomal protein L3 [Thermococcus sp. AM4] Length = 346 Score = 72.5 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 55/292 (18%), Positives = 89/292 (30%), Gaps = 83/292 (28%) Query: 4 GVVARKLGMTCVYNIE-------GR--RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA- 53 G K GMT + I+ G+ +PVT++ + V R K GY+ ++ Sbjct: 40 GFAGYKAGMTHILMIDDSPGLTKGKEIFVPVTIVEVPPLFVYGIR-AYKQGYLGLETATE 98 Query: 54 ---------------------------------------GEAKVKNVSKPMRGFFSSVNV 74 GE + + + + Sbjct: 99 VWFHELNDNVKRRIKTLPKNYGEEDFKAKLGQLEDLVNDGEIVDVRLLVHTQPWLIKLKK 158 Query: 75 SPKKKLFEFRVQK-----DDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHN 128 P+ + D +G G+L+DV +T GKG G +KR Sbjct: 159 KPEVMEYAIGGDDVKAKFDYAKEKIGKELRASEVLHEGELLDVIAVTKGKGTQGPVKRWG 218 Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188 + R G+ G P RV AG+MG + T N ++++ + L Sbjct: 219 IKVQFHKAQRAGKGRHVGNLGPW-HPARVMWTVPQAGQMGFHHRTEFNKRLIAIGENGKL 277 Query: 189 IL-------------------------VKGCVPGAKKNSWILVRDSFKSAVN 215 IL ++G VPGA K I VR + + Sbjct: 278 ILNGNEIEITPKGGFPHYGVIRSDFLMIEGSVPGAFKR-IIRVRPAIRPPKK 328 >gi|294496017|ref|YP_003542510.1| 50S ribosomal protein L3P [Methanohalophilus mahii DSM 5219] gi|292667016|gb|ADE36865.1| LSU ribosomal protein L3P [Methanohalophilus mahii DSM 5219] Length = 337 Score = 72.1 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 56/286 (19%), Positives = 89/286 (31%), Gaps = 72/286 (25%) Query: 4 GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGY------- 46 G K+GMT V I+ + +PVTV+ + R Y Sbjct: 41 GFAGYKVGMTHVIMIDDAKNSLTEGAEIAVPVTVIETPQIGIAAIRAYKDTPYGEKTISE 100 Query: 47 ----------------------------MAVQVGAGEAKVKNV-----SKPMRGFFSSVN 73 MA V G+ V + G Sbjct: 101 AWSANLDGDIGRRIKTPKNYNTEKSLENMASLVEEGKVSEIRVITYTIPSSVSGIPKKKA 160 Query: 74 VSPKKKLFEFRVQKDDDL--LPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130 + + V+ + +GS + F+ G ++DV +T G G G +KR Sbjct: 161 DIMETAVSGSDVKAKFEYAKYILGSKVAISDIFSEGNIIDVAAITRGYGTEGPVKRWGIQ 220 Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--DDKR-- 186 + H S R G+ G P ++ G+ G ++ T N ++ V D Sbjct: 221 LAKNKHSRQSSLRQVGTLGPWNPPHVSWR-VPQMGQAGYHQRTEYNKRILKVSSDVDEVN 279 Query: 187 -------------GLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 ILVKG VPG K I +R+ + + G+ Sbjct: 280 PAGGFVNYGLVGGDYILVKGTVPGPSKR-LIRLREPTRPKTSAVGE 324 >gi|207109616|ref|ZP_03243778.1| 50S ribosomal protein L3 [Helicobacter pylori HPKX_438_CA4C1] Length = 116 Score = 72.1 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 13/126 (10%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + +K+GM+ I+ PVT+L + +V +NG V + +K + Sbjct: 4 LVQKIGMSR--TIDANSTPVTLLKVLQAKVCQL----ENGKALVAYAMHKKH----NKAI 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G +S + F K +G S + V + T G+GF+G MK Sbjct: 54 EGQQKKYQLSKEFNH--FATLKASQQKELGD-LDLSALETLKRVKASFKTKGRGFAGVMK 110 Query: 126 RHNFGG 131 R NF G Sbjct: 111 RWNFQG 116 >gi|145628333|ref|ZP_01784134.1| 50S ribosomal protein L4 [Haemophilus influenzae 22.1-21] gi|145640871|ref|ZP_01796453.1| 50S ribosomal protein L3 [Haemophilus influenzae R3021] gi|144980108|gb|EDJ89767.1| 50S ribosomal protein L4 [Haemophilus influenzae 22.1-21] gi|145274385|gb|EDK14249.1| 50S ribosomal protein L3 [Haemophilus influenzae 22.4-21] Length = 49 Score = 71.7 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 1/50 (2%) Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 MAG +G RVTV++LEVV VD +R L+LVKG VPGA N ++V+ + K+ Sbjct: 1 MAGHLGAERVTVQSLEVVRVDAERKLLLVKGSVPGAI-NGDVIVKPAVKA 49 >gi|315425680|dbj|BAJ47337.1| large subunit ribosomal protein L3 [Candidatus Caldiarchaeum subterraneum] gi|315427562|dbj|BAJ49161.1| large subunit ribosomal protein L3 [Candidatus Caldiarchaeum subterraneum] Length = 320 Score = 71.7 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 90/268 (33%), Gaps = 65/268 (24%) Query: 4 GVVARKLGMTCVYNIE--------GRRIP--VTVLHLDNCQVVVH--------------- 38 G + K+GMT V+ I+ G + TV+ +V+ Sbjct: 40 GFIGYKVGMTMVHYIDNTPNSPTQGSEVAKACTVVAAPPLKVIGISLYRNVDGELVNIGK 99 Query: 39 ---RTLDKNGY----------MAVQVGA--GEAKVKNVSKPMRGFFSSVNVSPKKKLFEF 83 + + ++ A ++G + + + +P+ + Sbjct: 100 YWSKEVPEDVKRRNPTFRPMPSAEEIGQLEDDVDEVRIVVATQPRLVGAGKAPRIAEIKI 159 Query: 84 RVQKDDDLLP----VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGV 138 + + L VG F GQ VDV +T GKGF G +KR+ L+ Sbjct: 160 GGKPAEALEKAKQLVGKDLRVTDVFKEGQFVDVIAVTKGKGFQGVVKRYGVSILQRKSRK 219 Query: 139 SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS-------VDDKRG---- 187 + R + G +P V +G+MG +R T N ++ ++ K G Sbjct: 220 TR--RGVAAIGPW-NPHYVMYTVPRSGQMGYHRRTEFNKRILRIGDDPASINPKSGWHRF 276 Query: 188 ------LILVKGCVPGAKKNSWILVRDS 209 ++++G V G +L + Sbjct: 277 GLVKSDYLVLEGSVAGTPLRPLVLRAPA 304 >gi|302774326|ref|XP_002970580.1| hypothetical protein SELMODRAFT_411279 [Selaginella moellendorffii] gi|300162096|gb|EFJ28710.1| hypothetical protein SELMODRAFT_411279 [Selaginella moellendorffii] Length = 115 Score = 71.3 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Query: 7 ARKLGMTC--VYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52 K GMT V++ GRRIP+TVL D+ QVV +T+D + A+QVG Sbjct: 63 GVKCGMTSTAVWDKWGRRIPITVLWADDNQVVQVKTVDHETFKALQVG 110 >gi|2425176|dbj|BAA22270.1| ribosomal protein L3 [Halobacterium salinarum] Length = 330 Score = 71.3 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 18/115 (15%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F G+ D G+T GKG G +KR + H ++ R G+ G +P RV Sbjct: 186 DVFRAGEFADAAGITKGKGTQGPVKRWGVQKRKGKHARHVA-RRIGNLGPW-NPSRVRST 243 Query: 161 KKMAGRMGGNRVTVKNLEVVSVD-----------DKRGLI-----LVKGCVPGAK 199 G+ G ++ T N ++ ++ G + LVKG VPG + Sbjct: 244 VPQQGQTGYHQRTELNKRLIDINDGDEPSPDGGFPNYGEVDGPYTLVKGSVPGPE 298 >gi|193084317|gb|ACF09976.1| ribosomal protein L3 [uncultured marine group II euryarchaeote KM3-130-D10] Length = 358 Score = 71.3 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 22/137 (16%) Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153 G++ + GQ +DV G+T GKG+ G++KR L +H S R G+ G Sbjct: 206 GGTISLDDVYQTGQEIDVVGVTKGKGWQGSIKRWGIKLL--SHKNSKRRRQGGNMGDFGT 263 Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV-DDKRG-----------------LILVKGCV 195 V K + AG++G ++ T N ++ + + + ++++G + Sbjct: 264 -RYVRKTIRQAGQVGYHQRTELNKRILRISNPEESDITPAGGFLNYGEVTNPYMIIQGSL 322 Query: 196 PGAKKNSWILVRDSFKS 212 PG K R++ +S Sbjct: 323 PGPAKRML-RFREAIRS 338 >gi|115675312|ref|XP_001202265.1| PREDICTED: similar to Mitochondrial ribosomal protein L3, partial [Strongylocentrotus purpuratus] gi|115711825|ref|XP_780771.2| PREDICTED: similar to Mitochondrial ribosomal protein L3, partial [Strongylocentrotus purpuratus] Length = 98 Score = 71.0 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 1/81 (1%) Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123 F SV + K+ + F V + L P G+ ++F G VD+ TI KGF G Sbjct: 4 EYADLFKSVCLPVKEHITSFNVTDNAALQP-GTPLYAAHFRPGMYVDIAAKTIDKGFQGV 62 Query: 124 MKRHNFGGLRATHGVSISHRS 144 MKR G A+HG + +HR Sbjct: 63 MKRWGMKGQPASHGATKTHRK 83 >gi|193083866|gb|ACF09547.1| ribosomal protein L3 [uncultured marine group II euryarchaeote KM3-85-F5] Length = 350 Score = 71.0 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 22/137 (16%) Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153 G + + GQ VDV G+T GKG+ G++KR L TH S R G+ G Sbjct: 198 GGQIGLDDVYQAGQEVDVVGVTKGKGWQGSIKRFGLKLL--THKNSKRRRQGGNMGDFGT 255 Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------DDKRGLILVKGCV 195 G V K + AG++G ++ T N ++ + + + ++V+G + Sbjct: 256 -GYVRKTIRQAGQVGYHKRTELNKRILRISNPDESEITPAGGFLNYGEVRNPYMIVQGSL 314 Query: 196 PGAKKNSWILVRDSFKS 212 PG K + RD + Sbjct: 315 PGPAKR-LLRFRDPIRP 330 >gi|170291100|ref|YP_001737916.1| 50S ribosomal protein L3P [Candidatus Korarchaeum cryptofilum OPF8] gi|170175180|gb|ACB08233.1| ribosomal protein L3 [Candidatus Korarchaeum cryptofilum OPF8] Length = 332 Score = 71.0 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 61/280 (21%), Positives = 98/280 (35%), Gaps = 79/280 (28%) Query: 7 ARKLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHRTLDKNGYMAVQ------ 50 K+GM V E G++I TV+ ++V R K GY ++ Sbjct: 41 GYKVGMVHVLLKEDRPGKLNLGQQITLASTVIETPPIEIVGFR-AYKEGYYGLKPLTTAL 99 Query: 51 -------------VGAG-----------------EAKVKNVSKP-MRGFFSSV----NVS 75 +G G E ++ + ++P + G + Sbjct: 100 RIEKKDPISRTLTIGEGVDNFNEALSKLEGAKVSEIRILSYTRPDLAGIHKKKPEFMEIP 159 Query: 76 PKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRA 134 K E R++ L VGS F VGQLVDVT +T G G+ G ++R LR Sbjct: 160 VKGGEMEERIEFAKSL--VGSQLKVDSVFKVGQLVDVTAVTKGHGWQGVVRRFGIELLR- 216 Query: 135 THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------ 182 H GS G R P ++ AG+ G ++ T N ++ + Sbjct: 217 -HKAGKGRWRVGSLGSRHPPYVTWR-VPRAGQTGYHKRTEYNKRILMMGDLTKGDLDLSP 274 Query: 183 --------DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214 + IL+ G VPG K ++ +R + + Sbjct: 275 KGGFKNYGILRSQYILLSGSVPGPAKR-FVFIRHPIRPSY 313 >gi|16082270|ref|NP_394728.1| 50S ribosomal protein L3P [Thermoplasma acidophilum DSM 1728] gi|42559694|sp|Q9HIQ9|RL3_THEAC RecName: Full=50S ribosomal protein L3P gi|10640617|emb|CAC12395.1| 50S ribosomal protein L3 related protein [Thermoplasma acidophilum] Length = 331 Score = 71.0 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 40/142 (28%), Positives = 59/142 (41%), Gaps = 24/142 (16%) Query: 94 VGSVFSPSYF-TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G + + F G+ VDV +T GKGF+G +KR L + R G+ G Sbjct: 176 LGKQITFTDFSKPGKFVDVVSITKGKGFTGHVKRFGVKLLPRKNRKHR--RMIGTLGPW- 232 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVS------VD-------------DKRGLILVKG 193 P V AG+MG + T+ N+ V+ VD K +L+ G Sbjct: 233 HPDWVRNTVPQAGQMGFQQRTISNVRVIKYGNKEEVDSINVRGGFLHYGFVKNDYVLLFG 292 Query: 194 CVPGAKKNSWILVRDSFKSAVN 215 +PGA K I +RD + V Sbjct: 293 SIPGASKR-LIKMRDPARQKVP 313 >gi|77024938|gb|ABA61365.1| ribosomal protein L3 [uncultured marine group II euryarchaeote HF70_59C08] Length = 338 Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 55/286 (19%), Positives = 86/286 (30%), Gaps = 86/286 (30%) Query: 4 GVVARKLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53 G K GMT V + G + VTV+ + +V+ R GY G Sbjct: 42 GFAGWKAGMTHVMMRDLNPGSPSAGAEVRKAVTVVEVPPMRVLAVR-----GYKMTPYGK 96 Query: 54 GEAKVKNVSK--------------PMRG------FFSS---------------------V 72 A S P R Sbjct: 97 QTAGEAWASADKLSDVIPSLPRRIPERKEHDANAHLDKLRESDLAEVRLIVSSQPDKVSA 156 Query: 73 NVSPKKKLFEFRVQKDD-------DLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAM 124 S ++ E + D +G F G +DV G+T G G G + Sbjct: 157 VGSKSPEIMEMGLTGGDLGAQLDWAAEKLGEELGIEDVFESGSDIDVIGVTKGYGNQGVV 216 Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-- 182 +R L +H S R G+ G G V K + AG+ G ++ T N ++ + Sbjct: 217 RRFGVKLL--SHKNSKRRRQIGNMGDFGT-GYVRKTIRQAGQTGYHQRTEYNKRILRIAG 273 Query: 183 ----------------DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212 + K ++++G +PG K I RD+ + Sbjct: 274 EEESQITPAGGFLHYGEVKNHYMIIQGSLPGPAKR-LIRFRDAARP 318 >gi|47079404|gb|AAT10147.1| ribosomal protein L3 [uncultured marine group II euryarchaeote DeepAnt-JyKC7] Length = 358 Score = 70.2 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 23/141 (16%) Query: 94 VGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G + G+ +DV G+T GKG+ G +KR L +H S R G+ G Sbjct: 205 LGGEIGIDDVYEAGKELDVVGITKGKGWQGVIKRFGVKLL--SHKNSKRRRQIGNMGDFG 262 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------DDKRGLILVKGC 194 G V K + AG+MG ++ T N ++ + + ++++G Sbjct: 263 T-GYVRKTIRQAGQMGYHKRTELNKRILRISNPGESDVTPAGGFLHYGEVTNPYMVLEGS 321 Query: 195 VPGAKKNSWILVRDSFKSAVN 215 +PG K + RD + N Sbjct: 322 LPGPAKR-LLRFRDPVRPHTN 341 >gi|291333648|gb|ADD93339.1| ribosomal protein L3 [uncultured archaeon MedDCM-OCT-S11-C441] Length = 348 Score = 69.8 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 23/142 (16%) Query: 90 DLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148 L +G + VGQ VDV G+T GKG+ G++KR L +H S R G+ Sbjct: 191 ALERLGGEIGIEDVYDVGQEVDVVGVTKGKGWQGSIKRFGLKLL--SHKNSKRRRQGGNM 248 Query: 149 GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-DDKRGLI-----------------L 190 G G V K + AG++G ++ T N +++ + + + I + Sbjct: 249 GDFGT-GYVRKTIRQAGQVGYHKRTELNKKILRISNPEESEITPAGGFLNYGEVTNPYMI 307 Query: 191 VKGCVPGAKKNSWILVRDSFKS 212 ++G +PG K I RD + Sbjct: 308 IQGSLPGPAKR-LIRFRDPTRP 328 >gi|110668741|ref|YP_658552.1| 50S ribosomal protein L3P [Haloquadratum walsbyi DSM 16790] gi|121692171|sp|Q18GE9|RL3_HALWD RecName: Full=50S ribosomal protein L3P gi|109626488|emb|CAJ52949.1| ribosomal protein L3 [Haloquadratum walsbyi DSM 16790] Length = 338 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 49/129 (37%), Gaps = 18/129 (13%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F G+ +D G+T GKG G +KR + H R G+ G +P RV Sbjct: 193 DIFRAGEYLDAAGVTKGKGTQGPVKRFGVQKRKGKHARQGYRRRIGNLGPW-NPSRVRST 251 Query: 161 KKMAGRMGGNRVTVKNLEVVSV----------------DDKRGLILVKGCVPGAKKNSWI 204 G+ G ++ T N ++ + + L+KG +PG + + Sbjct: 252 VPQQGQTGYHQRTELNKRLIEIGNGDEPTVDGGFVGYGEVDGPYALIKGSLPGPDQR-LL 310 Query: 205 LVRDSFKSA 213 R + + + Sbjct: 311 RFRTAVRPS 319 >gi|255098787|gb|ACU00734.1| 60S ribosomal protein L3 [Nosema bombycis] gi|326573816|gb|ADZ95674.1| 60S ribosomal protein L3 [Nosema bombycis] Length = 384 Score = 69.4 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 34/123 (27%), Positives = 49/123 (39%), Gaps = 16/123 (13%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F V + +D G+T GKGF G +KR R G P RV Sbjct: 203 EVFEVNENLDTIGVTKGKGFQGVVKRFGVTIQP--RKSRKGIRKVACIGAW-HPSRVMTT 259 Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRGL-----------ILVKGCVP--GAKKNSWILVR 207 AG+MG +R T N +V + + L I G +P G+ KN +I+V+ Sbjct: 260 VARAGQMGFHRRTETNKKVYMIGNGNELIKTEFDLTEKPITPLGGIPHYGSIKNDYIMVK 319 Query: 208 DSF 210 + Sbjct: 320 GAV 322 >gi|57641477|ref|YP_183955.1| 50S ribosomal protein L3P [Thermococcus kodakarensis KOD1] gi|73917495|sp|Q5JDJ0|RL3_PYRKO RecName: Full=50S ribosomal protein L3P gi|57159801|dbj|BAD85731.1| LSU ribosomal protein L3P [Thermococcus kodakarensis KOD1] Length = 346 Score = 69.4 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 54/292 (18%), Positives = 93/292 (31%), Gaps = 83/292 (28%) Query: 4 GVVARKLGMTCVYNIE-------GR--RIPVTVLHLDNCQVVVHRTLDKNGY----MAVQ 50 G K GMT + I+ G+ +PVT++ + V R K GY A + Sbjct: 40 GFAGYKAGMTHILMIDDSPGLTKGKEIFVPVTIVEVPPLFVYGIR-AYKQGYLGLETATE 98 Query: 51 VGAGE--------AKVKNVSKPMRGFFSS--------------------------VNVSP 76 V + K + F + + + Sbjct: 99 VWFHDLHKNVARRIKTLPKNYNEEAFQAKLGQLEDLVNDGEIADVRLLVHTQPWLIGLKK 158 Query: 77 KKKLFEFRVQKDD-------DLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHN 128 K ++ E+ + DD +G G+L+DV +T GKG G +KR Sbjct: 159 KPEVMEYAIGGDDVKAKFDYAKEKIGKELRAGEVLHEGELLDVIAVTKGKGTQGPVKRWG 218 Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------ 182 + R G+ G P RV AG+MG + T N ++++ Sbjct: 219 VKVQFHKAQRAGKGRHIGNLGPW-HPARVMWTVPQAGQMGFHHRTEFNKRLIAIGENGKL 277 Query: 183 -------------------DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 + ++++G +PG+ K I VR + + Sbjct: 278 VLDGNEIEITPKGGFPHYGIVRSDFLMIEGTIPGSFKR-IIRVRPAIRPPKK 328 >gi|240104060|ref|YP_002960369.1| 50S ribosomal protein L3P [Thermococcus gammatolerans EJ3] gi|259709743|sp|C5A286|RL3_THEGJ RecName: Full=50S ribosomal protein L3P gi|239911614|gb|ACS34505.1| LSU ribosomal protein L3P (rpl3P) [Thermococcus gammatolerans EJ3] Length = 346 Score = 69.0 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 51/287 (17%), Positives = 87/287 (30%), Gaps = 83/287 (28%) Query: 4 GVVARKLGMTCVYNIE-------GR--RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA- 53 G K GMT + I+ G+ +PVT++ + V R K GY+ ++ Sbjct: 40 GFAGYKAGMTHILMIDDSPGLTKGKEIFVPVTIVEVPPLFVYGIR-AYKQGYLGLETATE 98 Query: 54 ---------------------------------------GEAKVKNVSKPMRGFFSSVNV 74 GE + + + + Sbjct: 99 VWFHELNDNVKRRIKTLPKNYGEEDFKAKLGQLEDLVNDGEIVDVRLLVHTQPWLIKLKK 158 Query: 75 SPKKKLFEFRVQKDDDLLP-----VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHN 128 P+ + +G G+L+DV +T GKG G +KR Sbjct: 159 KPEVMEYAIGGDDVKAKFEYAKERIGKEIRASEVLHEGELLDVIAVTKGKGTQGPVKRWG 218 Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188 + R G+ G P RV AG+MG + T N ++++ + L Sbjct: 219 VKVQFHKAQRAGKGRHIGNLGPW-HPARVMWTVPQAGQMGFHHRTEFNKRLIAIGENGKL 277 Query: 189 -------------------------ILVKGCVPGAKKNSWILVRDSF 210 ++++G VPG+ K I VR + Sbjct: 278 VLNGNEIDITPKGGFPHYGIIRSDFLMIEGSVPGSFKR-IIRVRPAI 323 >gi|329765069|ref|ZP_08256653.1| 50S ribosomal protein L3P [Candidatus Nitrosoarchaeum limnia SFB1] gi|329138446|gb|EGG42698.1| 50S ribosomal protein L3P [Candidatus Nitrosoarchaeum limnia SFB1] Length = 330 Score = 69.0 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 55/141 (39%), Gaps = 25/141 (17%) Query: 94 VGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G F G +DV +T GKG+ G ++R + H + R S G Sbjct: 180 LGKEIKIDQIFETGATIDVAAITKGKGWQGVIQRFGVK--KKQHKSRKTVREVASLGPIS 237 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-DDKRG-------------------LILVK 192 ++ AG+MG ++ T + +++ + + + I++K Sbjct: 238 PASVMYS-VPRAGQMGFHQRTEYDKKIMVIGNTENNQIKINPDGGYKHFGLVKGDFIILK 296 Query: 193 GCVPGAKKNSWILVRDSFKSA 213 G VPG + I +R ++A Sbjct: 297 GSVPGTYRR-LIKLRSQIRNA 316 >gi|257076559|ref|ZP_05570920.1| 50S ribosomal protein L3P [Ferroplasma acidarmanus fer1] Length = 319 Score = 69.0 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 39/151 (25%), Positives = 58/151 (38%), Gaps = 24/151 (15%) Query: 90 DLLPVGSVFSPSYFTV-GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148 +G F G VDV +T GKGF G +KR L ++ R G+ Sbjct: 160 AEEKLGKELHFDDFNSTGSFVDVISVTKGKGFQGVVKRFGVKLLPRSNRKHR--RMIGTL 217 Query: 149 GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS------VD-------------DKRGLI 189 G P V AG++G ++ T+ N+ ++ VD + I Sbjct: 218 GPW-HPDWVRNTVPQAGQVGLHQRTIHNIRIMKTATKEQVDEINVKGGFLKYGLVRNDYI 276 Query: 190 LVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220 L+ G + G K I +RD + AV KV Sbjct: 277 LLYGSISGPSKR-LIKMRDPARQAVPNTDKV 306 >gi|315425735|dbj|BAJ47391.1| large subunit ribosomal protein L3 [Candidatus Caldiarchaeum subterraneum] Length = 289 Score = 68.6 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 77/224 (34%), Gaps = 48/224 (21%) Query: 4 GVVARKLGMTCVYNIE--------GRRIP--VTVLHLDNCQVVVH--------------- 38 G + K+GMT V+ I+ G + TV+ +V+ Sbjct: 40 GFIGYKVGMTMVHYIDNTPNSPTQGSEVAKACTVVAAPPLKVIGISLYRNVDGELVNIGK 99 Query: 39 ---RTLDKNGY----------MAVQVGA--GEAKVKNVSKPMRGFFSSVNVSPKKKLFEF 83 + + ++ A ++G + + + +P+ + Sbjct: 100 YWSKEVPEDVKRRNPTFRPMPSAEEIGQLEDDVDEVRIVVATQPRLVGAGKAPRIAEIKI 159 Query: 84 RVQKDDDLLP----VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGV 138 + + L VG F GQ VDV +T GKGF G +KR+ L+ Sbjct: 160 GGKPAEALEKAKQLVGKDLRVTDVFKEGQFVDVIAVTKGKGFQGVVKRYGVSILQRKSRK 219 Query: 139 SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 + R + G +P V +G+MG +R T N ++ + Sbjct: 220 TR--RGVAAIGPW-NPHYVMYTVPRSGQMGYHRRTEFNKRILRI 260 >gi|303388761|ref|XP_003072614.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506] gi|303301755|gb|ADM11254.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506] Length = 383 Score = 68.3 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 36/139 (25%), Positives = 49/139 (35%), Gaps = 32/139 (23%) Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159 F + +DV G+T GKGF G +KR R G P RV Sbjct: 202 AEVFGENENIDVIGVTKGKGFQGTVKRFGVRKQP--RKSRKGIRKVACIGAW-HPSRVMY 258 Query: 160 NKKMAGRMGGNRVTVKNLEVVSV----------------------------DDKRGLILV 191 + AG+MG +R T KN V + + K I+V Sbjct: 259 SVARAGQMGFHRRTEKNKRVYMIGNGSTKIKTEFDLTEKAISPMGGFPHYGEVKNDFIMV 318 Query: 192 KGCVPGAKKNSWILVRDSF 210 KG V G +K + +R S Sbjct: 319 KGAVVGPRKR-VVTLRKSL 336 >gi|303390711|ref|XP_003073586.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506] gi|303302733|gb|ADM12226.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506] Length = 383 Score = 67.9 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 36/139 (25%), Positives = 49/139 (35%), Gaps = 32/139 (23%) Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159 F + +DV G+T GKGF G +KR R G P RV Sbjct: 202 AEVFGENENIDVIGVTKGKGFQGTVKRFGVRKQP--RKSRKGIRKVACIGAW-HPSRVMY 258 Query: 160 NKKMAGRMGGNRVTVKNLEVVSV----------------------------DDKRGLILV 191 + AG+MG +R T KN V + + K I+V Sbjct: 259 SVARAGQMGFHRRTEKNKRVYMIGNGSTKIKTEFDLTEKAISPMGGFPHYGEVKNDFIMV 318 Query: 192 KGCVPGAKKNSWILVRDSF 210 KG V G +K + +R S Sbjct: 319 KGAVVGPRKR-VVTLRKSL 336 >gi|161528317|ref|YP_001582143.1| 50S ribosomal protein L3P [Nitrosopumilus maritimus SCM1] gi|160339618|gb|ABX12705.1| ribosomal protein L3 [Nitrosopumilus maritimus SCM1] Length = 331 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 54/140 (38%), Gaps = 25/140 (17%) Query: 94 VGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G F G VDV +T GKG+ G +KR N + H + R GS G Sbjct: 181 LGKEIKIDQIFETGASVDVAAITKGKGWQGVLKRWNVK--KKQHKSRKTVREVGSLGPIS 238 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEV----------VSVDDKRG----------LILVK 192 P V AG+ G ++ + + + ++ G I++K Sbjct: 239 -PQSVMYTVPRAGQFGFHQRVEYDKRIMIMGNTDDDKLKINPDGGFKHFGLVKGDFIVLK 297 Query: 193 GCVPGAKKNSWILVRDSFKS 212 G VPGA + I +R ++ Sbjct: 298 GSVPGAYRR-LIKLRSQIRN 316 >gi|118576052|ref|YP_875795.1| ribosomal protein L3 [Cenarchaeum symbiosum A] gi|118194573|gb|ABK77491.1| ribosomal protein L3 [Cenarchaeum symbiosum A] Length = 328 Score = 66.7 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 56/148 (37%), Gaps = 24/148 (16%) Query: 94 VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G G VDV +T GKG+ G ++R G R H + R GS G Sbjct: 179 LGKTVKASDVLEPGAGVDVAAITKGKGWQGVIQR--MGAKRKQHKSRKTVRELGSLGPIS 236 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-------------------DDKRGLILVKG 193 P V AG+MG ++ N +++V K I++KG Sbjct: 237 -PQNVMYTVPRAGQMGFHQRIEYNKRIMAVGSAGEDDAINPSGGYKHFGMVKGDYIVLKG 295 Query: 194 CVPGAKKNSWILVRDSFKSAVNCKGKVS 221 VPG + + +R ++A K + Sbjct: 296 SVPGTYRR-LVKLRAQIRNAPKRTSKPN 322 >gi|88597634|ref|ZP_01100867.1| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 84-25] gi|88189938|gb|EAQ93914.1| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 84-25] Length = 115 Score = 65.6 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 14/126 (11%) Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65 + K+GM+ I VT+L + N +V + G V G+A +K + Sbjct: 4 IVEKIGMSRTITNP--SIAVTLLRVVNAKVCEV----EGGKALVAYPKGKAS----NKCV 53 Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125 G N+S + F + G + +++ V+ T G+G+SG MK Sbjct: 54 AGQQKKYNLSAEYNRFA---TLEVANTEAGD-LDETPLNEAKILKVSFNTKGRGYSGVMK 109 Query: 126 RHNFGG 131 RHNF G Sbjct: 110 RHNFAG 115 >gi|269986342|gb|EEZ92643.1| ribosomal protein L3 [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 301 Score = 65.2 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 58/272 (21%), Positives = 97/272 (35%), Gaps = 63/272 (23%) Query: 4 GVVARKLGMTCV-YNIEGRRIPV---------TVLHLDNCQVVVHRTLDK---------- 43 G K+GM + Y + P TVL V R +K Sbjct: 29 GFAGYKVGMIQLSYIDSDKNSPTFKMEVITNATVLESPPLFVCALRFYNKGSSIGESWGS 88 Query: 44 --NGYMAVQVGA-----------GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKD-D 89 N ++A QV G+ + + + +++ K ++FE + + + Sbjct: 89 GINKFVARQVKFKENNKSVDDFKGKFDDIRLIVSTQPW--KIDLKKKPEVFELCIGGNLE 146 Query: 90 DLLPVGSVF------SPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHR 143 D L +G + S G VDV +T GKGF+G++KR+ S S R Sbjct: 147 DKLTLGKELLSKEIEASSVIKDGNFVDVASVTKGKGFTGSVKRYGVKIYPV--HASKSRR 204 Query: 144 SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-----------------DDKR 186 G+ G + +V GR+G N N V V + K Sbjct: 205 KAGNLGA-ESMAKVQFTVPQHGRLGFNSRVEYNKFVFRVIKDADEVNIPSGYKRYGNVKG 263 Query: 187 GLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 I++KG VPG+ + I++R + + + Sbjct: 264 SAIILKGSVPGSA-SRLIMLRKAIRPTKKAEP 294 >gi|308160270|gb|EFO62765.1| Ribosomal protein L3 [Giardia lamblia P15] Length = 379 Score = 64.8 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 47/146 (32%), Gaps = 34/146 (23%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F+VG +D +T G+GF G + R L +R G P V Sbjct: 207 DVFSVGAQIDTISITRGRGFEGVVTRWGVTRLP--RKTRRGNRKVACIGAW-HPANVQYT 263 Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRG------------------------------LIL 190 AG+MG T N +V +D I+ Sbjct: 264 VARAGQMGYFHRTDTNKQVFMIDTAENPKCCTTEFDLTDKSINPVGGFVNYGRVQGDFIM 323 Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNC 216 +KG PG K+ ++ R + NC Sbjct: 324 IKGTCPGPKRRPVVM-RSALLPHRNC 348 >gi|19173079|ref|NP_597630.1| 60S RIBOSOMAL PROTEIN L3 [Encephalitozoon cuniculi GB-M1] gi|85014317|ref|XP_955654.1| 60S ribosomal protein L3 [Encephalitozoon cuniculi GB-M1] gi|51701710|sp|Q8SQI3|RL3_ENCCU RecName: Full=60S ribosomal protein L3 gi|19168746|emb|CAD26265.1| 60S RIBOSOMAL PROTEIN L3 [Encephalitozoon cuniculi GB-M1] gi|19171348|emb|CAD27073.1| 60S RIBOSOMAL PROTEIN L3 [Encephalitozoon cuniculi GB-M1] Length = 383 Score = 64.4 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 36/138 (26%), Positives = 50/138 (36%), Gaps = 32/138 (23%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F V + +D G+T GKGF G +KR R G P RV + Sbjct: 203 EVFGVNENIDTIGVTKGKGFQGTVKRFGVRKQP--RKSRKGIRKVACIGAW-HPSRVMYS 259 Query: 161 KKMAGRMGGNRVTVKNLEVVSV----------------------------DDKRGLILVK 192 AG+MG +R T KN V + + + I+VK Sbjct: 260 IARAGQMGFHRRTEKNKRVYMIGNGSSNIKTEFDLTEKPISPMGGFPHYGEVRNDFIMVK 319 Query: 193 GCVPGAKKNSWILVRDSF 210 G V GA+K + +R S Sbjct: 320 GAVVGARKR-VVTLRKSL 336 >gi|94734479|emb|CAK11308.1| mitochondrial ribosomal protein L3 [Danio rerio] Length = 137 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 17/35 (48%), Positives = 23/35 (65%) Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVV 36 R G+VA KLGM V++ G R VT+L + +C VV Sbjct: 103 RVGLVAIKLGMMPVWSKSGERHVVTMLQVKDCHVV 137 >gi|253747835|gb|EET02309.1| Ribosomal protein L3 [Giardia intestinalis ATCC 50581] Length = 379 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 43/135 (31%), Gaps = 33/135 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F VG+ +D +T G+GF G + R L +R G P V Sbjct: 207 DVFEVGKQIDTISITRGRGFEGVVTRWGVTRLP--RKTRRGNRKVACIGSW-HPANVQYT 263 Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRG------------------------------LIL 190 AG+MG T N +V +D I+ Sbjct: 264 VARAGQMGYFHRTDTNKQVFMIDTAENPRCCTTEFDLTDKSINPVGGFVNYGRIQGDFIM 323 Query: 191 VKGCVPGAKKNSWIL 205 +KG PG K+ ++ Sbjct: 324 IKGTCPGPKRRPVVM 338 >gi|302833677|ref|XP_002948402.1| component of cytosolic 80S ribosome and 60S large subunit [Volvox carteri f. nagariensis] gi|300266622|gb|EFJ50809.1| component of cytosolic 80S ribosome and 60S large subunit [Volvox carteri f. nagariensis] Length = 386 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 58/191 (30%), Gaps = 48/191 (25%) Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQL 108 ++G G+ K + + G + V +FE S F ++ Sbjct: 168 KLGFGQKKAHLIEIQVNGGTVAQKVDFAYAMFE-------------KQVSVDAVFQPNEM 214 Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168 +D +T G G G ++R L R G P RV AG+ G Sbjct: 215 IDTIAITKGHGVQGVVQRWGVTRLP--RKTHRGLRKVACIGAW-HPARVKWTVARAGQQG 271 Query: 169 GNRVTVKNLEVVSVDDK-------------------------------RGLILVKGCVPG 197 + T N +V + K I+VKG VPG Sbjct: 272 FHHRTEINKKVYKIGKKGEASHLATTDFDVTKKEITPMGGFPHYGVVNEDYIMVKGAVPG 331 Query: 198 AKKNSWILVRD 208 KK + L R Sbjct: 332 TKKRAITLRRS 342 >gi|159109947|ref|XP_001705236.1| Ribosomal protein L3 [Giardia lamblia ATCC 50803] gi|157433317|gb|EDO77562.1| Ribosomal protein L3 [Giardia lamblia ATCC 50803] Length = 379 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 48/146 (32%), Gaps = 34/146 (23%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F+VG +D +T G+GF G + R L +R G P V Sbjct: 207 DVFSVGAQIDTISITRGRGFEGVVTRWGVTRLP--RKTRRGNRKVACIGAW-HPANVQYT 263 Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRG------------------------------LIL 190 AG+MG T N +V +D I+ Sbjct: 264 VARAGQMGYFHRTDTNKQVFMIDTAENPRCCTTEFDLTDKSINPVGGFVNYGRVQGDFIM 323 Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNC 216 +KG PG K+ ++ R++ NC Sbjct: 324 IKGTCPGPKRRPVVM-RNALLPHRNC 348 >gi|161899261|ref|XP_001712857.1| ribosomal protein L3 [Bigelowiella natans] gi|75756351|gb|ABA27245.1| ribosomal protein L3 [Bigelowiella natans] Length = 370 Score = 63.6 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 35/147 (23%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F ++D G+T G G G + R L R G P RV Sbjct: 191 SIFHENDIIDAIGITKGHGTKGVVSRWGITRLP--RKTHRGLRKVACIGPW-TPSRVAWT 247 Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRG-------------------------------LI 189 AG+ G ++ T+ N ++ + + + Sbjct: 248 ISRAGQKGYHKRTLFNKKIYKIGSEENFSYYSNSLSDSIVKSVNCMGGFKKFGFINNDYL 307 Query: 190 LVKGCVPGAKKNSWILVRDSFKSAVNC 216 ++KG + G+ K IL+R + K+ ++ Sbjct: 308 IIKGSMTGSSKRP-ILLRKNIKNKISS 333 >gi|302412909|ref|XP_003004287.1| 60S ribosomal protein L3 [Verticillium albo-atrum VaMs.102] gi|261356863|gb|EEY19291.1| 60S ribosomal protein L3 [Verticillium albo-atrum VaMs.102] Length = 391 Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 49/144 (34%), Gaps = 35/144 (24%) Query: 97 VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 S F +++DV +T GKGF+G R L R G P Sbjct: 203 EVSVDSIFEQDEMIDVIAVTKGKGFNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPS 259 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV-------------DDKRGLI------------- 189 V AG+MG + T N +V + D + +I Sbjct: 260 HVQWTVARAGQMGYHHRTSVNHKVYRIAKAGAEDSASTELDVTKKVITPLGGFVRYGEIN 319 Query: 190 ----LVKGCVPGAKKNSWILVRDS 209 +VKG +PG KK + +R S Sbjct: 320 NDFVMVKGSIPGPKKR-VVTLRKS 342 >gi|118389862|ref|XP_001027976.1| ribosomal protein L3 containing protein [Tetrahymena thermophila] gi|3861468|emb|CAA10068.1| ribosomal protein L3 [Tetrahymena thermophila] gi|89309746|gb|EAS07734.1| ribosomal protein L3 containing protein [Tetrahymena thermophila SB210] Length = 391 Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 32/127 (25%), Positives = 48/127 (37%), Gaps = 19/127 (14%) Query: 97 VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 F +++DV G+T GKGF+G +KR +R G G P Sbjct: 200 EVKVDSIFAENEMLDVLGVTKGKGFAGVIKRFGVK--HLQKKTHRGYRKVGCIGAW-HPS 256 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV-------------DDKRGLILVKGCVP--GAKK 200 R+ AG++G + T N +V V D I G P G K Sbjct: 257 RIRFTVPRAGQLGYHHRTETNKKVYRVGKGDDASNASTAGDVTDKAITPLGGFPHYGVVK 316 Query: 201 NSWILVR 207 N +I+++ Sbjct: 317 NDFIMIK 323 >gi|301500876|ref|YP_003795288.1| ribosomal protein L3 [Chromera velia] gi|300069422|gb|ADJ66530.1| ribosomal protein L3 [Chromera velia] Length = 193 Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 11/111 (9%) Query: 95 GSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP 154 G + + + KGF G + R+ F THG S H + GS G P Sbjct: 82 GELVDTKSLKYWEQFKIQTSAKQKGFLGVVARYKFTKGPKTHGSSH-HAAPGSIGAGTSP 140 Query: 155 GRVFKNKKMAGRMGGNRV-----TVKNLEVVSVDDKRGLILVKGCVPGAKK 200 GRV KK+ GR + T + L V ++ + V G +PG +K Sbjct: 141 GRVLPGKKLPGRRPLAKRNYMINTYRLLSV-----QQNKVEVPGTLPGRRK 186 >gi|296424388|ref|XP_002841730.1| hypothetical protein [Tuber melanosporum Mel28] gi|295637978|emb|CAZ85921.1| unnamed protein product [Tuber melanosporum] Length = 640 Score = 62.9 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 50/293 (17%), Positives = 73/293 (24%), Gaps = 98/293 (33%) Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38 + + K GMT + + G ++ VTV+ +V Sbjct: 294 TAALGYKAGMTTIVRDLDRPGAKMHKKEVVEAVTVIETPPMVIVGVVGYVETPRGLRSLT 353 Query: 39 ------------RTLDKNGYMA-----VQVGAGEAKVKNVSKPMRGFFSSVNV------- 74 R KN Y + + A G Sbjct: 354 TVWAEHLSDDLKRRFYKNWYKSKKKAFTKYAKRHAGEGKAISHELGRIKKYCTVVRVLAH 413 Query: 75 ---------SPKKKLFEFRVQKDDDLLPV--------GSVFSPSYFTVGQLVDVTGMTIG 117 K L E +V V V S F +++DV +T G Sbjct: 414 SQIRKTPLKQKKTHLMEIQVNGGSITDKVDFAFSHFEKEVTISSIFEQDEMIDVIAVTKG 473 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 GF+G R L R G P V AG+ G + T N Sbjct: 474 HGFNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWTVARAGQDGYHHRTSVNH 530 Query: 178 EVVSVDD------------------------------KRGLILVKGCVPGAKK 200 ++ + K ++VKG VPG KK Sbjct: 531 KIYRIGSGTDEGNASTEFDITKKTITPLGGFPRYGEIKNDFVMVKGSVPGVKK 583 >gi|21215170|gb|AAM43909.1|AF464911_1 large subunit ribosomal protein L3 [Aspergillus fumigatus] Length = 392 Score = 62.9 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 42/130 (32%), Gaps = 33/130 (25%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GF G R L R G P V Sbjct: 208 SIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 AG+MG + T N +V + + K I+ Sbjct: 265 VARAGQMGYHHRTSCNHKVFRIGKGSDEGNASTDFDISKKQITPMGGFVRYGEVKNDYIM 324 Query: 191 VKGCVPGAKK 200 VKG VPG KK Sbjct: 325 VKGSVPGVKK 334 >gi|71001672|ref|XP_755517.1| 60S ribosomal protein L3 [Aspergillus fumigatus Af293] gi|83305621|sp|Q8NKF4|RL3_ASPFU RecName: Full=60S ribosomal protein L3; AltName: Allergen=Asp f 23 gi|66853155|gb|EAL93479.1| 60S ribosomal protein L3 [Aspergillus fumigatus Af293] gi|159129584|gb|EDP54698.1| 60S ribosomal protein L3 [Aspergillus fumigatus A1163] Length = 392 Score = 62.9 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 42/130 (32%), Gaps = 33/130 (25%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GF G R L R G P V Sbjct: 208 SIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 AG+MG + T N +V + + K I+ Sbjct: 265 VARAGQMGYHHRTSCNHKVFRIGKGSDEGNASTDFDISKKQITPMGGFVRYGEVKNDYIM 324 Query: 191 VKGCVPGAKK 200 VKG VPG KK Sbjct: 325 VKGSVPGVKK 334 >gi|254572870|ref|XP_002493544.1| Protein component of the large (60S) ribosomal subunit [Pichia pastoris GS115] gi|238033343|emb|CAY71365.1| Protein component of the large (60S) ribosomal subunit [Pichia pastoris GS115] gi|328354631|emb|CCA41028.1| 60S ribosomal protein L3 [Pichia pastoris CBS 7435] Length = 388 Score = 62.5 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 47/154 (30%), Gaps = 35/154 (22%) Query: 96 SVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP 154 + F + +DV +T G GF G R L R G P Sbjct: 201 QTIAVDTVFEQNENIDVIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HP 257 Query: 155 GRVFKNKKMAGRMGGNRVTVKNLEVVSV---DDKRG------------------------ 187 V AG+ G + T N ++ V DD+ Sbjct: 258 AHVMWTVARAGQNGFHHRTSINHKIYRVGKGDDESNGSTEYDRTKKTVTPLGGFVRYGEI 317 Query: 188 ---LILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +++KG +PG K + +R S + + K Sbjct: 318 RNDFVMIKGSIPGPVKR-VVTLRKSLYTQTSRKA 350 >gi|121715726|ref|XP_001275472.1| 60S ribosomal protein L3 [Aspergillus clavatus NRRL 1] gi|119403629|gb|EAW14046.1| 60S ribosomal protein L3 [Aspergillus clavatus NRRL 1] Length = 392 Score = 61.7 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 42/130 (32%), Gaps = 33/130 (25%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GF G R L R G P V Sbjct: 208 SIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 AG+MG + T N +V + + K ++ Sbjct: 265 VARAGQMGYHHRTSCNHKVFRIGKGTDEGNASTEFDISKKQITPMGGFVRYGEVKNDYVM 324 Query: 191 VKGCVPGAKK 200 VKG VPG KK Sbjct: 325 VKGSVPGVKK 334 >gi|119481241|ref|XP_001260649.1| transcriptional corepressor Cyc8, putative [Neosartorya fischeri NRRL 181] gi|119408803|gb|EAW18752.1| transcriptional corepressor Cyc8, putative [Neosartorya fischeri NRRL 181] Length = 392 Score = 61.7 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 42/130 (32%), Gaps = 33/130 (25%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GF G R L R G P V Sbjct: 208 SIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 AG+MG + T N +V + + K ++ Sbjct: 265 VARAGQMGYHHRTSCNHKVFRIGKGSDEGNASTEFDISKKQITPMGGFVRYGEVKNDYVM 324 Query: 191 VKGCVPGAKK 200 VKG VPG KK Sbjct: 325 VKGSVPGVKK 334 >gi|160331207|ref|XP_001712311.1| rpl3 [Hemiselmis andersenii] gi|159765758|gb|ABW97986.1| rpl3 [Hemiselmis andersenii] Length = 388 Score = 61.7 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 45/130 (34%), Gaps = 33/130 (25%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F +++D G+T GKGF G +KR L R G F+ Sbjct: 212 DIFRQREIIDTIGITKGKGFQGVIKRWGVTKLP--RKTHRGARKVACVGSWHPSRVSFR- 268 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 AG+ G + T NL++ V + K +L Sbjct: 269 VPRAGQTGFHHRTQINLQIYRVGKALDSNNGSTEFDLSTKKITPMGGFPYYGNVKEDFLL 328 Query: 191 VKGCVPGAKK 200 +KGCV G+KK Sbjct: 329 LKGCVMGSKK 338 >gi|6537320|gb|AAF15600.1|AF198447_1 60S ribosomal protein L3 [Emericella nidulans] gi|259479602|tpe|CBF69975.1| TPA: 60S ribosomal protein L3 [Source:UniProtKB/TrEMBL;Acc:Q9UV31] [Aspergillus nidulans FGSC A4] Length = 392 Score = 61.3 bits (148), Expect = 8e-08, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 41/129 (31%), Gaps = 33/129 (25%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV +T G GF G R L R G P V Sbjct: 209 IFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWTV 265 Query: 162 KMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLILV 191 AG+MG + T N +V + + K IL+ Sbjct: 266 ARAGQMGYHHRTSCNHKVFRIGKGSDEANASTDFDVSKKQITPLGGFVRYGEVKNDFILL 325 Query: 192 KGCVPGAKK 200 KG VPG KK Sbjct: 326 KGSVPGVKK 334 >gi|67540064|ref|XP_663806.1| RL3_NEUCR 60S ribosomal protein L3 [Aspergillus nidulans FGSC A4] gi|40738798|gb|EAA57988.1| RL3_NEUCR 60S ribosomal protein L3 [Aspergillus nidulans FGSC A4] Length = 447 Score = 61.3 bits (148), Expect = 8e-08, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 41/129 (31%), Gaps = 33/129 (25%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV +T G GF G R L R G P V Sbjct: 264 IFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWTV 320 Query: 162 KMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLILV 191 AG+MG + T N +V + + K IL+ Sbjct: 321 ARAGQMGYHHRTSCNHKVFRIGKGSDEANASTDFDVSKKQITPLGGFVRYGEVKNDFILL 380 Query: 192 KGCVPGAKK 200 KG VPG KK Sbjct: 381 KGSVPGVKK 389 >gi|302658162|ref|XP_003020788.1| hypothetical protein TRV_05095 [Trichophyton verrucosum HKI 0517] gi|291184652|gb|EFE40170.1| hypothetical protein TRV_05095 [Trichophyton verrucosum HKI 0517] Length = 565 Score = 61.3 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 35/152 (23%) Query: 98 FSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGR 156 F ++VDV +T G GFSG R L R G P Sbjct: 223 IDVDSVFEKDEVVDVIAVTKGHGFSGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSH 279 Query: 157 VFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------DDKR 186 V AG+ G + T N ++ + + K Sbjct: 280 VQWTVARAGQDGYHHRTSANHKIYRIGKADDEGNASTEFDVSKKRITPMGGFVRYGEVKN 339 Query: 187 GLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +++KG +PG +K + +R + V+ K Sbjct: 340 DYVMLKGSIPGVRKR-VVTLRKTLWPQVSRKA 370 >gi|169774881|ref|XP_001821908.1| 60S ribosomal protein L3 [Aspergillus oryzae RIB40] gi|238496503|ref|XP_002379487.1| 60S ribosomal protein L3 [Aspergillus flavus NRRL3357] gi|83769771|dbj|BAE59906.1| unnamed protein product [Aspergillus oryzae] gi|220694367|gb|EED50711.1| 60S ribosomal protein L3 [Aspergillus flavus NRRL3357] Length = 392 Score = 61.3 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 42/130 (32%), Gaps = 33/130 (25%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GF G R L R G P V Sbjct: 208 SIFEKDEVIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 AG+MG + T N +V + + K ++ Sbjct: 265 VARAGQMGYHHRTSCNHKVYRIGKGSDEANASTDFDISKKQITPMGGFVRYGEVKNDFVM 324 Query: 191 VKGCVPGAKK 200 VKG VPG KK Sbjct: 325 VKGSVPGVKK 334 >gi|328876376|gb|EGG24739.1| 60S ribosomal protein L3 [Dictyostelium fasciculatum] Length = 455 Score = 60.9 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 49/153 (32%), Gaps = 39/153 (25%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T GKGF G +KR L R G P RV Sbjct: 209 SVFAENEMLDVISVTKGKGFQGVVKRWGVKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSVD-----------------------------------DK 185 AG+MG N ++ + + Sbjct: 266 VPRAGQMGFFHRVETNKKIYRIGKAQPTTGPKIPTGATEFDITAKTITPMGGFLNYGVVR 325 Query: 186 RGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 I+VKGCV G K I +R S + V G Sbjct: 326 NEFIMVKGCVGGPAKR-VITLRKSIRPNVTRAG 357 >gi|300521620|gb|ADK26021.1| r-protein L3p [Candidatus Nitrososphaera gargensis] Length = 332 Score = 60.9 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 40/149 (26%), Positives = 59/149 (39%), Gaps = 28/149 (18%) Query: 94 VGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G F VGQ +DV G+T GKG G + R FG R H S R+ G+ G Sbjct: 180 LGREVKVSDIFQVGQNIDVFGITRGKGIEGPVTR--FGIKRKQHKSRKSVRAVGTLGPIS 237 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVV-----------SVDD----------KRGLILV 191 P V G+ G ++ T N ++ S++ K I+V Sbjct: 238 -PAVVMYTVARQGQRGFHQRTEYNKRILVMSNTEKDGQNSINPSGGFKHFGLVKGDYIIV 296 Query: 192 KGCVPGAKKNSWIL---VRDSFKSAVNCK 217 +G VPG K + +R+ K + K Sbjct: 297 RGSVPGVPKRLIKMRQPIRNVSKKVLEPK 325 >gi|302502186|ref|XP_003013084.1| hypothetical protein ARB_00629 [Arthroderma benhamiae CBS 112371] gi|291176646|gb|EFE32444.1| hypothetical protein ARB_00629 [Arthroderma benhamiae CBS 112371] Length = 557 Score = 60.9 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 35/152 (23%) Query: 98 FSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGR 156 F ++VDV +T G GFSG R L R G P Sbjct: 223 IDVDSVFEKDEVVDVIAVTKGHGFSGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSH 279 Query: 157 VFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------DDKR 186 V AG+ G + T N ++ + + K Sbjct: 280 VQWTVARAGQDGYHHRTSANHKIYRIGKADDEGNASTDFDVSKKRITPMGGFVRYGEVKN 339 Query: 187 GLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +++KG +PG +K + +R + V+ K Sbjct: 340 DYVMLKGSIPGVRKR-VVTLRKTLWPQVSRKA 370 >gi|269859601|ref|XP_002649525.1| LSU ribosomal protein L3P [Enterocytozoon bieneusi H348] gi|220067076|gb|EED44544.1| LSU ribosomal protein L3P [Enterocytozoon bieneusi H348] Length = 329 Score = 60.2 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 4/87 (4%) Query: 97 VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 + F+ + +D G+T GKGF G +KR L + R G P Sbjct: 146 EIKVNNVFSKSEFLDTIGVTKGKGFQGVVKRWGTTILP--RKTNKGIRKVACIGAF-HPS 202 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV 182 RV + AG++G +R T +NL V + Sbjct: 203 RVMYSVARAGQVGFHRRTQQNLLVYDI 229 >gi|145608344|ref|XP_360650.2| large subunit ribosomal protein L3 [Magnaporthe oryzae 70-15] gi|145015825|gb|EDK00315.1| large subunit ribosomal protein L3 [Magnaporthe oryzae 70-15] Length = 392 Score = 60.2 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 42/129 (32%), Gaps = 33/129 (25%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++D+ +T G GF+G R L R G P V Sbjct: 209 IFEQNEMIDIIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWTV 265 Query: 162 KMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LILV 191 AG+MG + T N +V + D + ++V Sbjct: 266 ARAGQMGYHHRTSVNHKVYRIGKGDAEDNAATEIDVTKKKITPMGGFVRYGEINNDFVMV 325 Query: 192 KGCVPGAKK 200 KG +PG KK Sbjct: 326 KGSIPGTKK 334 >gi|1197059|gb|AAA88732.1| ribosomal protein L3 [Saccharomyces cerevisiae] Length = 387 Score = 60.2 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 47/140 (33%), Gaps = 34/140 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++D +T G GF G R L R G P V + Sbjct: 207 SVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAC-HPAHVMWS 263 Query: 161 KKMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LIL 190 AG+ G + T N ++ V DD+ I+ Sbjct: 264 VARAGQRGYHSRTSINHKIYRVGKGDDEANGATSFDRTKKTITPMGGFVHYGEIKNDFIM 323 Query: 191 VKGCVPGAKKNSWILVRDSF 210 VKGC+PG +K + +R S Sbjct: 324 VKGCIPGNRKR-IVTLRKSL 342 >gi|300709014|ref|XP_002996676.1| hypothetical protein NCER_100207 [Nosema ceranae BRL01] gi|239605995|gb|EEQ83005.1| hypothetical protein NCER_100207 [Nosema ceranae BRL01] Length = 384 Score = 60.2 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 16/123 (13%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F + + +DV G+T GKGF+G +KR R G P RV Sbjct: 203 DIFDINENLDVIGVTKGKGFTGVVKRFGVTKQP--RKSRKGIRKVACIGAW-HPSRVMTT 259 Query: 161 KKMAGRMGGNRVTVKNLEVVSV-----------DDKRGLILVKGCVP--GAKKNSWILVR 207 AG G +R T N +V + D LI G P G+ KN +I+++ Sbjct: 260 VARAGGKGFHRRTEINKKVYMIGHGKEKIKTEFDLTEKLITPMGGFPHYGSIKNDFIMLK 319 Query: 208 DSF 210 + Sbjct: 320 GAI 322 >gi|308798657|ref|XP_003074108.1| ribosomal protein L3.e, cytosolic-rice sp|P35684|RL3_ORYSA 60S ribosomal p (ISS) [Ostreococcus tauri] gi|116000280|emb|CAL49960.1| ribosomal protein L3.e, cytosolic-rice sp|P35684|RL3_ORYSA 60S ribosomal p (ISS) [Ostreococcus tauri] Length = 421 Score = 59.8 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++D+ G+T GKGF G + R L R G G P RV Sbjct: 241 SVFQQDEMIDLIGVTKGKGFQGVVTRWGVTKLP--RKTHRGLRKVGCIGAW-HPSRVSYT 297 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+MG + T N +V + Sbjct: 298 VARAGQMGYHHRTELNKKVYKI 319 >gi|303273052|ref|XP_003055887.1| predicted protein [Micromonas pusilla CCMP1545] gi|226461971|gb|EEH59263.1| predicted protein [Micromonas pusilla CCMP1545] Length = 387 Score = 59.8 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 45/142 (31%), Gaps = 34/142 (23%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++D +T GKGF G + R L R G G P RV Sbjct: 208 AVFAKDEMIDCISVTKGKGFEGVVTRWGVTRLP--RKTHRGLRKVGCIGAW-HPARVGYT 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDK-------------------------------RGLI 189 G+ G + T N ++ V + + Sbjct: 265 VARPGQHGYHHRTEINKKIYRVGKEGDSSHKASTDHDATEKDITPMGGFPHYGIVRNDYL 324 Query: 190 LVKGCVPGAKKNSWILVRDSFK 211 ++KG + G +K L R FK Sbjct: 325 MIKGGIAGPRKRLITLRRSLFK 346 >gi|145232153|ref|XP_001399531.1| 60S ribosomal protein L3 [Aspergillus niger CBS 513.88] gi|134056442|emb|CAL00609.1| unnamed protein product [Aspergillus niger] Length = 392 Score = 59.8 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 42/130 (32%), Gaps = 33/130 (25%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GF G R L R G P V Sbjct: 208 SIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPNHVQWT 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 AG+MG + T N +V V + K +L Sbjct: 265 VARAGQMGYHHRTSCNHKVFRVGKGSDEGNASTDFDISKKQITPMGGFVHYGEVKNDFVL 324 Query: 191 VKGCVPGAKK 200 +KG VPG KK Sbjct: 325 LKGSVPGVKK 334 >gi|284073154|gb|ADB77816.1| 60S ribosomal protein L3 [Chlamydomonas reinhardtii] gi|284073156|gb|ADB77817.1| 60S ribosomal protein L3 [Cladophora coelothrix] Length = 384 Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 54/302 (17%), Positives = 83/302 (27%), Gaps = 99/302 (32%) Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVV---------------- 36 + + K GMT + G ++ PVT++ VV Sbjct: 44 TAFMGYKAGMTHIVRDVEKPGSKLHKKETCEPVTIIECPPMVVVGAVGYVKTPRGLRSLN 103 Query: 37 ----------VHRTLDKNGYM---------AVQVGAGEAKVKNVSKPMRGFF-------- 69 V R KN Y A + G+ ++ ++ Sbjct: 104 TVWAEHLSEEVKRRFYKNWYKSKKKAFTKYAKKYSDGKKAIEAELAALKKHCCVIRVLAH 163 Query: 70 ---SSVNVSPKK-KLFEFRVQKDDDLLPV-------GSVFSPS-YFTVGQLVDVTGMTIG 117 + KK L E +V V S F +++D +T G Sbjct: 164 TQVKKLGFGVKKAHLMEVQVNGGTVAQKVDFAYSMFEKQVSVDAVFQPNEMIDTIAITKG 223 Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 G G ++R L R G P RV AG+ G + T N Sbjct: 224 HGVQGVVQRWGVTRLP--RKTHRGLRKVACIGAW-HPARVKWTVARAGQQGFHHRTEINK 280 Query: 178 EVVSVDDK-------------------------------RGLILVKGCVPGAKKNSWILV 206 +V + K +++KGCVPG KK + L Sbjct: 281 KVYKIGKKGDASHLATTEFDVTKKEITPMGGFPHYGVVSEDYLMIKGCVPGTKKRAITLR 340 Query: 207 RD 208 R Sbjct: 341 RS 342 >gi|159489312|ref|XP_001702641.1| ribosomal protein L3, component of cytosolic 80S ribosome and 60S large subunit [Chlamydomonas reinhardtii] gi|158280663|gb|EDP06420.1| ribosomal protein L3 [Chlamydomonas reinhardtii] Length = 386 Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 58/191 (30%), Gaps = 48/191 (25%) Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQL 108 ++G G K + + G + V +FE S F ++ Sbjct: 168 KLGFGVKKAHLMEVQVNGGTVAQKVDFAYSMFE-------------KQVSVDAVFQPNEM 214 Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168 +D +T G G G ++R L R G P RV AG+ G Sbjct: 215 IDTIAITKGHGVQGVVQRWGVTRLP--RKTHRGLRKVACIGAW-HPARVKWTVARAGQQG 271 Query: 169 GNRVTVKNLEVVSVDDK-------------------------------RGLILVKGCVPG 197 + T N +V + K +++KGCVPG Sbjct: 272 FHHRTEINKKVYKIGKKGDASHLATTEFDVTKKEITPMGGFPHYGVVSEDYLMIKGCVPG 331 Query: 198 AKKNSWILVRD 208 KK + L R Sbjct: 332 TKKRAITLRRS 342 >gi|255071333|ref|XP_002507748.1| ribosomal protein L3 [Micromonas sp. RCC299] gi|226523023|gb|ACO69006.1| ribosomal protein L3 [Micromonas sp. RCC299] Length = 385 Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 45/141 (31%), Gaps = 35/141 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++D ++ GKGF G + R L R G G P RV Sbjct: 206 AVFNKDEMIDCISVSKGKGFEGVVTRWGVTRLP--RKTHRGLRKVGCIGAW-HPARVAFT 262 Query: 161 KKMAGRMGGNRVTVKNLEVVSV-------------------------------DDKRGLI 189 G+ G + T N ++ V K + Sbjct: 263 VARPGQHGYHHRTEINKKIYRVGKEGEDSHKATTEHDATDKDITPMGGFPHYGIVKNDYL 322 Query: 190 LVKGCVPGAKKNSWILVRDSF 210 ++KG + G +K I +R S Sbjct: 323 MIKGGIAGPRKR-VITLRQSL 342 >gi|171689180|ref|XP_001909530.1| hypothetical protein [Podospora anserina S mat+] gi|170944552|emb|CAP70663.1| unnamed protein product [Podospora anserina S mat+] Length = 392 Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 41/129 (31%), Gaps = 33/129 (25%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV +T G GFSG R L R G P V Sbjct: 209 IFEKDEMIDVIAVTKGHGFSGVTARWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWTV 265 Query: 162 KMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LILV 191 AG+MG + T N +V + D ++V Sbjct: 266 ARAGQMGYHHRTSVNHKVYRIGKGDADDNAATEIDVTKKTITPMGGFVRYGEIKNDFVMV 325 Query: 192 KGCVPGAKK 200 KG VPG KK Sbjct: 326 KGSVPGTKK 334 >gi|50411414|ref|XP_457044.1| DEHA2B01804p [Debaryomyces hansenii CBS767] gi|74659529|sp|Q6BXM5|RL3_DEBHA RecName: Full=60S ribosomal protein L3 gi|49652709|emb|CAG85030.1| DEHA2B01804p [Debaryomyces hansenii] Length = 389 Score = 59.8 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 33/140 (23%), Positives = 45/140 (32%), Gaps = 34/140 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F ++VDV +T G GF G R L R G P V Sbjct: 207 SVFEKDEMVDVAAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPANVQWT 263 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 AG+ G + T N +V V + K +L Sbjct: 264 VARAGQNGFHHRTSINHKVYRVGSAGDESSGATEFDRTKKTINPMGGFVRYGNVKNDFML 323 Query: 191 VKGCVPGAKKNSWILVRDSF 210 +KG +PG KK + +R S Sbjct: 324 LKGSIPGVKKR-IVTIRKSL 342 >gi|212536953|ref|XP_002148632.1| 60S ribosomal protein L3 [Penicillium marneffei ATCC 18224] gi|210068374|gb|EEA22465.1| 60S ribosomal protein L3 [Penicillium marneffei ATCC 18224] Length = 392 Score = 59.4 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 49/147 (33%), Gaps = 34/147 (23%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV +T G GF+G R L R G P V Sbjct: 209 IFEQNEVIDVIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWTV 265 Query: 162 KMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLILV 191 AG+MG + T N ++ + + K ++V Sbjct: 266 ARAGQMGYHHRTSVNHKIYRIGKGSDEGNASTEFDVSKKTITPLGGFVRYGEVKNDFVIV 325 Query: 192 KGCVPGAKKNSWILVRDSFKSAVNCKG 218 KG VPG KK + +R + V+ K Sbjct: 326 KGSVPGVKKR-VMTLRKTLYPQVSRKA 351 >gi|328773128|gb|EGF83165.1| hypothetical protein BATDEDRAFT_29178 [Batrachochytrium dendrobatidis JAM81] Length = 390 Score = 59.4 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 47/140 (33%), Gaps = 34/140 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++D+ G+T G GF G + R L R G P RV Sbjct: 208 SIFEQDEMIDIIGITKGHGFEGVVARWGVKKLP--RKTHKGLRKVACIGAW-HPSRVQFA 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSVD---------DKRGL---------------------IL 190 AG+ G + T N +V V + L ++ Sbjct: 265 VPRAGQDGYHHRTEMNKKVYRVGKAGDKNSASTEFDLTTKDITPMGGFPHYGMINEDWLM 324 Query: 191 VKGCVPGAKKNSWILVRDSF 210 +KG PG +K + +R S Sbjct: 325 IKGSCPGVRKR-VVTLRKSL 343 >gi|281500833|pdb|3JYW|C Chain C, Structure Of The 60s Proteins For Eukaryotic Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 362 Score = 59.4 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 47/140 (33%), Gaps = 34/140 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++D +T G GF G R L R G P V + Sbjct: 203 SVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPAHVMWS 259 Query: 161 KKMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LIL 190 AG+ G + T N ++ V DD+ I+ Sbjct: 260 VARAGQRGYHSRTSINHKIYRVGKGDDEANGATSFDRTKKTITPMGGFVHYGEIKNDFIM 319 Query: 191 VKGCVPGAKKNSWILVRDSF 210 VKGC+PG +K + +R S Sbjct: 320 VKGCIPGNRKR-IVTLRKSL 338 >gi|302915465|ref|XP_003051543.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256732482|gb|EEU45830.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 391 Score = 59.4 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 43/130 (33%), Gaps = 33/130 (25%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GF+G R L R G P V Sbjct: 208 SIFEQDEMIDVIAVTKGHGFNGVTARWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LIL 190 AG+MG + T N ++ + D + ++ Sbjct: 265 VARAGQMGYHHRTSVNHKIYRIGKGDAEDNAATEIDVTKKTITPLGGFVRYGEVKNDFVM 324 Query: 191 VKGCVPGAKK 200 +KG +PG KK Sbjct: 325 LKGSIPGVKK 334 >gi|326475993|gb|EGE00003.1| 60S ribosomal protein L3 [Trichophyton tonsurans CBS 112818] gi|326485021|gb|EGE09031.1| 60S ribosomal protein L3 [Trichophyton equinum CBS 127.97] Length = 410 Score = 59.0 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 35/152 (23%) Query: 98 FSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGR 156 F ++VDV +T G GFSG R L R G P Sbjct: 222 IDVDSVFEKDEVVDVIAVTKGHGFSGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSH 278 Query: 157 VFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------DDKR 186 V AG+ G + T N ++ + + K Sbjct: 279 VQWTVARAGQDGYHHRTSANHKIYRIGKADDEGNASTDFDVSKKRITPMGGFVRYGEVKN 338 Query: 187 GLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +++KG +PG +K + +R + V+ K Sbjct: 339 DYVMLKGSIPGVRKR-VVTLRKTLWPQVSRKA 369 >gi|49258841|pdb|1S1I|C Chain C, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obtained By Docking Atomic Models For Rna And Protein Components Into A 11.7 A Cryo-Em Map. This File, 1s1i, Contains 60s Subunit. The 40s Ribosomal Subunit Is In File 1s1h Length = 386 Score = 59.0 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 47/140 (33%), Gaps = 34/140 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++D +T G GF G R L R G P V + Sbjct: 206 SVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPAHVMWS 262 Query: 161 KKMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LIL 190 AG+ G + T N ++ V DD+ I+ Sbjct: 263 VARAGQRGYHSRTSINHKIYRVGKGDDEANGATSFDRTKKTITPMGGFVHYGEIKNDFIM 322 Query: 191 VKGCVPGAKKNSWILVRDSF 210 VKGC+PG +K + +R S Sbjct: 323 VKGCIPGNRKR-IVTLRKSL 341 >gi|115383888|ref|XP_001208491.1| 60S ribosomal protein L3 [Aspergillus terreus NIH2624] gi|114196183|gb|EAU37883.1| 60S ribosomal protein L3 [Aspergillus terreus NIH2624] Length = 395 Score = 59.0 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 42/130 (32%), Gaps = 33/130 (25%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GF G R L R G P V Sbjct: 211 SIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPNHVQWT 267 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 AG+MG + T N +V + + K ++ Sbjct: 268 VARAGQMGYHHRTSCNHKVFRIGKGSDEGNASTDFDVSKKQITPMGGFVHYGEVKNDYVM 327 Query: 191 VKGCVPGAKK 200 +KG +PG KK Sbjct: 328 LKGSIPGVKK 337 >gi|6324637|ref|NP_014706.1| Rpl3p [Saccharomyces cerevisiae S288c] gi|2507307|sp|P14126|RL3_YEAST RecName: Full=60S ribosomal protein L3; AltName: Full=Maintenance of killer protein 8; AltName: Full=RP1; AltName: Full=Trichodermin resistance protein; AltName: Full=YL1 gi|315113528|pdb|3O58|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit Of The First 80s In The Asymmetric Unit. gi|315113573|pdb|3O5H|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit Of The Second 80s In The Asymmetric Unit. gi|1420207|emb|CAA99256.1| TCM1 [Saccharomyces cerevisiae] gi|2104875|emb|CAA94548.1| YOR29-14 [Saccharomyces cerevisiae] gi|151945689|gb|EDN63930.1| ribosomal protein L3 [Saccharomyces cerevisiae YJM789] gi|190407398|gb|EDV10665.1| ribosomal protein L3 [Saccharomyces cerevisiae RM11-1a] gi|256269309|gb|EEU04617.1| Rpl3p [Saccharomyces cerevisiae JAY291] gi|259149545|emb|CAY86349.1| Rpl3p [Saccharomyces cerevisiae EC1118] gi|285814949|tpg|DAA10842.1| TPA: Rpl3p [Saccharomyces cerevisiae S288c] gi|323302848|gb|EGA56652.1| Rpl3p [Saccharomyces cerevisiae FostersB] gi|323307150|gb|EGA60433.1| Rpl3p [Saccharomyces cerevisiae FostersO] gi|323331453|gb|EGA72868.1| Rpl3p [Saccharomyces cerevisiae AWRI796] gi|323335592|gb|EGA76876.1| Rpl3p [Saccharomyces cerevisiae Vin13] gi|323346509|gb|EGA80796.1| Rpl3p [Saccharomyces cerevisiae Lalvin QA23] gi|323352260|gb|EGA84796.1| Rpl3p [Saccharomyces cerevisiae VL3] Length = 387 Score = 59.0 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 47/140 (33%), Gaps = 34/140 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++D +T G GF G R L R G P V + Sbjct: 207 SVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPAHVMWS 263 Query: 161 KKMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LIL 190 AG+ G + T N ++ V DD+ I+ Sbjct: 264 VARAGQRGYHSRTSINHKIYRVGKGDDEANGATSFDRTKKTITPMGGFVHYGEIKNDFIM 323 Query: 191 VKGCVPGAKKNSWILVRDSF 210 VKGC+PG +K + +R S Sbjct: 324 VKGCIPGNRKR-IVTLRKSL 342 >gi|156849033|ref|XP_001647397.1| hypothetical protein Kpol_1018p71 [Vanderwaltozyma polyspora DSM 70294] gi|156118083|gb|EDO19539.1| hypothetical protein Kpol_1018p71 [Vanderwaltozyma polyspora DSM 70294] Length = 387 Score = 59.0 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 44/140 (31%), Gaps = 34/140 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GF G R L R G P V + Sbjct: 207 SVFEQNEMIDVVAVTKGHGFEGVTHRWGTKRLP--RKTHRGLRKVACIGPW-HPAHVMWS 263 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 AG+ G + T N +V V ++ Sbjct: 264 VARAGQRGYHHRTSINHKVYRVGKGEDEANAATSFDRTKKTINPMGGFVQYGMVNNDFVM 323 Query: 191 VKGCVPGAKKNSWILVRDSF 210 VKG +PG KK + +R S Sbjct: 324 VKGSIPGCKKR-VVTLRKSL 342 >gi|162605876|ref|XP_001713453.1| 60S ribosomal protein L3 [Guillardia theta] gi|13794385|gb|AAK39762.1|AF083031_119 60S ribosomal protein L3 [Guillardia theta] Length = 375 Score = 59.0 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 59/159 (37%), Gaps = 35/159 (22%) Query: 94 VGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G + F+ +LVD+ G++ GKGF G + R L R G Sbjct: 194 LGKKITIDQIFSENELVDIIGISKGKGFQGVVSRWGVTKLP--RKTHRGARKVACVGSW- 250 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------DDKRG------------- 187 P RV AG+ G + T N+++ ++ ++K Sbjct: 251 HPSRVSFTVARAGQSGYHHRTSLNIKIYAIGKDGFISNHILTNNKSNFSINPMGGFPFYG 310 Query: 188 -----LILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221 +++KG + G+KK IL R S N K ++ Sbjct: 311 LVKSDFLILKGGIVGSKKRGLIL-RKSIHKNKNFKENIN 348 >gi|327304004|ref|XP_003236694.1| 60S ribosomal protein L3 [Trichophyton rubrum CBS 118892] gi|326462036|gb|EGD87489.1| 60S ribosomal protein L3 [Trichophyton rubrum CBS 118892] Length = 459 Score = 59.0 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 35/152 (23%) Query: 98 FSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGR 156 F ++VDV +T G GFSG R L R G P Sbjct: 271 IDVDSVFEKDEVVDVIAVTKGHGFSGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSH 327 Query: 157 VFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------DDKR 186 V AG+ G + T N ++ + + K Sbjct: 328 VQWTVARAGQDGYHHRTSANHKIYRIGKADDEGNASTDFDVSKKRITPMGGFVRYGEVKN 387 Query: 187 GLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +++KG +PG +K + +R + V+ K Sbjct: 388 DYVMLKGSIPGVRKR-VVTLRKTLWPQVSRKA 418 >gi|313103694|pdb|3IZC|C Chain C, Localization Of The Large Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome gi|315113303|pdb|3IZS|C Chain C, Localization Of The Large Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 388 Score = 59.0 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 47/140 (33%), Gaps = 34/140 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++D +T G GF G R L R G P V + Sbjct: 207 SVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPAHVMWS 263 Query: 161 KKMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LIL 190 AG+ G + T N ++ V DD+ I+ Sbjct: 264 VARAGQRGYHSRTSINHKIYRVGKGDDEANGATSFDRTKKTITPMGGFVHYGEIKNDFIM 323 Query: 191 VKGCVPGAKKNSWILVRDSF 210 VKGC+PG +K + +R S Sbjct: 324 VKGCIPGNRKR-IVTLRKSL 342 >gi|254579294|ref|XP_002495633.1| ZYRO0B16082p [Zygosaccharomyces rouxii] gi|238938523|emb|CAR26700.1| ZYRO0B16082p [Zygosaccharomyces rouxii] Length = 388 Score = 58.6 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 47/140 (33%), Gaps = 34/140 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G G+ G R L R G P V + Sbjct: 207 SVFEQNEMIDVAAVTKGHGYEGVTHRWGTTRLP--RKTHRGLRKVACIGAW-HPNHVMWS 263 Query: 161 KKMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LIL 190 AG+ G + T N ++ V DD+ ++ Sbjct: 264 VARAGQNGFHHRTSINHKIYRVGKGDDEANAATEFDRTKKTINPMGGFPHYGEVKNDFVV 323 Query: 191 VKGCVPGAKKNSWILVRDSF 210 +KG +PG KK + +R S Sbjct: 324 IKGAIPGTKKR-VVTLRKSL 342 >gi|225563388|gb|EEH11667.1| large subunit ribosomal protein L3 [Ajellomyces capsulatus G186AR] Length = 552 Score = 58.6 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 48/147 (32%), Gaps = 34/147 (23%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV +T G GF+G R L R G P V Sbjct: 369 IFEKDEMIDVIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWTV 425 Query: 162 KMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLILV 191 AG+ G + T N ++ + + K +++ Sbjct: 426 ARAGQDGYHHRTSCNHKIYRIGKGSDEGNASTEFDVSKKQITPMGGFVRYGEVKNDYVMI 485 Query: 192 KGCVPGAKKNSWILVRDSFKSAVNCKG 218 KG VPG KK + +R + V+ + Sbjct: 486 KGSVPGVKKR-VLTLRKTLYPQVSRRA 511 >gi|330039014|ref|XP_003239763.1| 60S ribosomal protein L3 [Cryptomonas paramecium] gi|327206688|gb|AEA38865.1| 60S ribosomal protein L3 [Cryptomonas paramecium] Length = 331 Score = 58.6 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 4/90 (4%) Query: 94 VGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 +G+ + + F G+ VD +T GKGF+G ++R L R G Sbjct: 147 LGNQVTVNTVFKDGEYVDTIAITKGKGFTGVVQRWGVTKLP--RKTRRGARKVACIGSW- 203 Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 P RV + AG+ G + T N++V + Sbjct: 204 HPSRVSYSVPRAGQKGYHHRTQSNIQVYKI 233 >gi|322705242|gb|EFY96829.1| 60S ribosomal protein L3 [Metarhizium anisopliae ARSEF 23] Length = 391 Score = 58.6 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 42/129 (32%), Gaps = 33/129 (25%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV +T G GF+G R L R G P V Sbjct: 209 IFEQDEMIDVIAVTKGHGFNGVTARWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWTV 265 Query: 162 KMAGRMGGNRVTVKNLEVVSV---DDK---------------------------RGLILV 191 AG+MG + T N +V + D + ++V Sbjct: 266 ARAGQMGYHHRTSVNHKVYRIGKGDAEDSASTEIDVTKKKITPLGGFVRYGEVNNDFVMV 325 Query: 192 KGCVPGAKK 200 KG +PG KK Sbjct: 326 KGSIPGVKK 334 >gi|242810586|ref|XP_002485611.1| 60S ribosomal protein L3 [Talaromyces stipitatus ATCC 10500] gi|218716236|gb|EED15658.1| 60S ribosomal protein L3 [Talaromyces stipitatus ATCC 10500] Length = 398 Score = 58.6 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 49/147 (33%), Gaps = 34/147 (23%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV +T G GF+G R L R G P V Sbjct: 215 IFEQNEVIDVIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPNHVQWTV 271 Query: 162 KMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLILV 191 AG+MG + T N ++ + + K ++V Sbjct: 272 ARAGQMGYHHRTSVNHKIYRIGKGSDEGNASTEYDVSKKTITPLGGFVRYGEVKNDFVIV 331 Query: 192 KGCVPGAKKNSWILVRDSFKSAVNCKG 218 KG VPG KK + +R + V+ K Sbjct: 332 KGSVPGVKKR-VMTLRKTLYPQVSRKA 357 >gi|226329479|ref|ZP_03804997.1| hypothetical protein PROPEN_03388 [Proteus penneri ATCC 35198] gi|225202665|gb|EEG85019.1| hypothetical protein PROPEN_03388 [Proteus penneri ATCC 35198] Length = 53 Score = 58.6 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 2/33 (6%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLD--NC 33 G+V +K+GMT ++ +G IPVTV+ ++ C Sbjct: 2 IGLVGKKVGMTRIFTEDGVSIPVTVIEIEKQPC 34 >gi|302697183|ref|XP_003038270.1| hypothetical protein SCHCODRAFT_80517 [Schizophyllum commune H4-8] gi|300111967|gb|EFJ03368.1| hypothetical protein SCHCODRAFT_80517 [Schizophyllum commune H4-8] Length = 421 Score = 58.6 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 45/140 (32%), Gaps = 34/140 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F + VD+ +T G GF G R L R G P +V + Sbjct: 241 SVFEQDECVDIIAVTKGHGFEGVTHRWGTKKLP--RKTHKGLRKVACIGAW-HPSKVMYS 297 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 AG+ G + T N ++ V K ++ Sbjct: 298 VARAGQNGYHHRTEINKKIYRVGLGSDDGNASTEHDITKKAITPMGGFPHYGIVKNDYLM 357 Query: 191 VKGCVPGAKKNSWILVRDSF 210 +KG +PG KK I +R S Sbjct: 358 LKGSIPGTKKR-IITIRKSL 376 >gi|116204627|ref|XP_001228124.1| 60S ribosomal protein L3 [Chaetomium globosum CBS 148.51] gi|88176325|gb|EAQ83793.1| 60S ribosomal protein L3 [Chaetomium globosum CBS 148.51] Length = 392 Score = 58.6 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 42/130 (32%), Gaps = 33/130 (25%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GFSG R L R G P V Sbjct: 208 SIFEKDEMIDVIAVTKGHGFSGVTARWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 AG+MG + T N +V + + ++ Sbjct: 265 VARAGQMGYHHRTSVNHKVYRIGKGDADDSAATEIDVTKKKITPMGGFVRYGEVNNDFVM 324 Query: 191 VKGCVPGAKK 200 VKG VPG KK Sbjct: 325 VKGSVPGVKK 334 >gi|50288047|ref|XP_446452.1| hypothetical protein [Candida glabrata CBS 138] gi|74661344|sp|Q6FTJ2|RL3_CANGA RecName: Full=60S ribosomal protein L3 gi|49525760|emb|CAG59379.1| unnamed protein product [Candida glabrata] Length = 387 Score = 58.2 bits (140), Expect = 7e-07, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 46/140 (32%), Gaps = 34/140 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++D +T G GF G R L R G P V + Sbjct: 207 SVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPAHVMWS 263 Query: 161 KKMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LIL 190 AG+ G + T N ++ + DD+ ++ Sbjct: 264 VARAGQRGYHHRTSINHKIYRIGKGDDEGNAATNFDRTKKTINPMGGFVHYGMVNNDFVM 323 Query: 191 VKGCVPGAKKNSWILVRDSF 210 VKG +PG KK + +R S Sbjct: 324 VKGSIPGCKKR-VVTLRKSL 342 >gi|296812079|ref|XP_002846377.1| 60S ribosomal protein L3 [Arthroderma otae CBS 113480] gi|238841633|gb|EEQ31295.1| 60S ribosomal protein L3 [Arthroderma otae CBS 113480] Length = 458 Score = 58.2 bits (140), Expect = 7e-07, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 35/152 (23%) Query: 98 FSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGR 156 F ++VDV +T G GFSG R L R G P Sbjct: 270 IDVDTVFEKDEVVDVIAVTKGHGFSGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSH 326 Query: 157 VFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------DDKR 186 V AG+ G + T N ++ + + K Sbjct: 327 VQWTVARAGQDGYHHRTSANHKIYRIGKAGDEGNASTDFDVSKKQITPMGGFVRYGEVKN 386 Query: 187 GLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +++KG +PG +K + +R + V+ K Sbjct: 387 DFVMLKGSIPGVRKR-VVTLRKTLWPQVSRKA 417 >gi|310771890|emb|CBH28886.1| 60S RIBOSOMAL PROTEIN L3 [Anncaliia algerae] Length = 381 Score = 58.2 bits (140), Expect = 7e-07, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 45/128 (35%), Gaps = 31/128 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F L+DV G+T GKGF+G KR L + R G P V + Sbjct: 205 DVFGENDLIDVIGVTKGKGFNGVTKRFGTKILP--RKTNKGKRKVACIGAW-HPANVLYS 261 Query: 161 KKMAGRMGGNRVTVKNLEVVS-------VDDKRGL---------------------ILVK 192 AG++G +R T N V + + L I++K Sbjct: 262 VPRAGQLGFHRRTEYNKMVYKLGNGKQSIKTEYDLTEKTVNPMGGFPHYGCVSNDFIMIK 321 Query: 193 GCVPGAKK 200 G PG +K Sbjct: 322 GSCPGPRK 329 >gi|330805639|ref|XP_003290787.1| 60S ribosomal protein L3 [Dictyostelium purpureum] gi|325079065|gb|EGC32684.1| 60S ribosomal protein L3 [Dictyostelium purpureum] Length = 399 Score = 58.2 bits (140), Expect = 7e-07, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 48/137 (35%), Gaps = 38/137 (27%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F+ +++DV G+T GKGF+G +KR L R G P RV Sbjct: 211 VFSENEMIDVIGVTKGKGFNGVIKRWGVRKLP--RKTHKGLRKVACIGAW-HPSRVSTTV 267 Query: 162 KMAGRMGGNRVTVKNLEVVSVD-----------------------------------DKR 186 AG++G + +N ++ + + Sbjct: 268 PRAGQLGYHHRVERNKKIYRIGQAQPVEGKQISTGKTEFDLTEKTINPMGGFTHYGVVDQ 327 Query: 187 GLILVKGCVPGAKKNSW 203 I+VKGCV G +K + Sbjct: 328 DFIMVKGCVAGPRKRAL 344 >gi|238601436|ref|XP_002395411.1| hypothetical protein MPER_04539 [Moniliophthora perniciosa FA553] gi|215466097|gb|EEB96341.1| hypothetical protein MPER_04539 [Moniliophthora perniciosa FA553] Length = 219 Score = 57.9 bits (139), Expect = 9e-07, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 45/140 (32%), Gaps = 34/140 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F + +DV +T G GF G R L R G P +V + Sbjct: 39 SVFEQDENIDVIAVTKGHGFEGVTHRWGTKKLP--RKTHKGLRKVACIGAW-HPSKVMFS 95 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 AG+ G + T N ++ + K ++ Sbjct: 96 VARAGQSGYHHRTELNKKIYRIGSGSDEGNASTEHDISKKPITPMGGFPHYGIVKNDFLM 155 Query: 191 VKGCVPGAKKNSWILVRDSF 210 +KG +PG KK I +R S Sbjct: 156 LKGSIPGTKKR-VITIRKSL 174 >gi|258565167|ref|XP_002583328.1| 60S ribosomal protein L3 [Uncinocarpus reesii 1704] gi|237907029|gb|EEP81430.1| 60S ribosomal protein L3 [Uncinocarpus reesii 1704] Length = 383 Score = 57.9 bits (139), Expect = 9e-07, Method: Composition-based stats. Identities = 30/148 (20%), Positives = 47/148 (31%), Gaps = 34/148 (22%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GF G R L R G P V Sbjct: 199 SIFEQDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 255 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 AG+ G + T N ++ + + K ++ Sbjct: 256 VARAGQDGYHHRTSVNHKIYRIGKGSDEGNASTDFDVSKKQITPMGGFVRYGEVKNDFLI 315 Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +KG PG KK + +R + V+ K Sbjct: 316 IKGSCPGVKKR-VLTLRKTLYPQVSRKA 342 >gi|255717332|ref|XP_002554947.1| KLTH0F17556p [Lachancea thermotolerans] gi|238936330|emb|CAR24510.1| KLTH0F17556p [Lachancea thermotolerans] Length = 388 Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 45/140 (32%), Gaps = 34/140 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GF G R L R G P V + Sbjct: 207 SVFEQNEMIDVCAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPAHVMWS 263 Query: 161 KKMAGRMGGNRVTVKNLEVVSVD------------------------------DKRGLIL 190 AG+ G + T N +V V ++ Sbjct: 264 VARAGQRGFHTRTSINHKVYRVGKGGDEGNASTEFDRTKKSITPMGGFVQYGPVNNDFVM 323 Query: 191 VKGCVPGAKKNSWILVRDSF 210 VKGC+PG +K + +R S Sbjct: 324 VKGCIPGNRKR-VVTLRKSL 342 >gi|154422961|ref|XP_001584492.1| hypothetical protein [Trichomonas vaginalis G3] gi|121918739|gb|EAY23506.1| hypothetical protein TVAG_071700 [Trichomonas vaginalis G3] Length = 415 Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 50/157 (31%), Gaps = 8/157 (5%) Query: 26 TVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV 85 TV+ + G A + GA + N + + ++ + Sbjct: 155 TVIRVIAH--TQSAKTTTRGVDANEQGAKKVLKGNHLGQKKAHMIEIQINGGDVAAKLNY 212 Query: 86 QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145 K + FT G+ +D G+ G G+ G + R+ L+ R Sbjct: 213 AKSILEKEIK---VADVFTEGEQIDTIGVGKGFGWEGVIHRYGTKRLQ--KKTHRGRRKV 267 Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 G +P RV + G+ G + T N + + Sbjct: 268 ACIGPW-NPARVLWSVARYGQRGCHHRTEMNKRIYRI 303 >gi|123495590|ref|XP_001326781.1| hypothetical protein [Trichomonas vaginalis G3] gi|121909700|gb|EAY14558.1| hypothetical protein TVAG_388910 [Trichomonas vaginalis G3] Length = 415 Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 49/157 (31%), Gaps = 8/157 (5%) Query: 26 TVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV 85 TV+ + G A + GA + N + ++ + Sbjct: 155 TVIRVIAH--TQSAKTTTRGVDANEQGAKKVLKGNHLGQKKAHMIENQINGGDVAAKLNY 212 Query: 86 QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145 K + FT G+ +D G+ G G+ G + R+ L+ R Sbjct: 213 AKSILEKEIK---VADVFTEGEQIDTIGVGKGFGWEGVIHRYGTKRLQ--KKTHRGRRKV 267 Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 G +P RV + G+ G + T N + + Sbjct: 268 ACIGPW-NPARVLWSVARYGQRGCHHRTEMNKRIYRI 303 >gi|46123823|ref|XP_386465.1| RL3_NEUCR 60S ribosomal protein L3 [Gibberella zeae PH-1] Length = 378 Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 42/130 (32%), Gaps = 33/130 (25%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GF+G R L R G P V Sbjct: 195 SIFEQDEMIDVVAVTKGHGFNGVTARWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 251 Query: 161 KKMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LIL 190 AG+MG + T N ++ + D ++ Sbjct: 252 VARAGQMGYHHRTSVNHKIYRIGKGDADDNAATEIDVTKKTITPLGGFVRYGEVKNDFVM 311 Query: 191 VKGCVPGAKK 200 +KG +PG KK Sbjct: 312 LKGSIPGVKK 321 >gi|123440132|ref|XP_001310830.1| hypothetical protein [Trichomonas vaginalis G3] gi|123470017|ref|XP_001318217.1| hypothetical protein [Trichomonas vaginalis G3] gi|154419020|ref|XP_001582527.1| hypothetical protein [Trichomonas vaginalis G3] gi|121892616|gb|EAX97900.1| hypothetical protein TVAG_059650 [Trichomonas vaginalis G3] gi|121900970|gb|EAY05994.1| hypothetical protein TVAG_124190 [Trichomonas vaginalis G3] gi|121916763|gb|EAY21541.1| hypothetical protein TVAG_013060 [Trichomonas vaginalis G3] Length = 415 Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 50/157 (31%), Gaps = 8/157 (5%) Query: 26 TVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV 85 TV+ + G A + GA + N + + ++ + Sbjct: 155 TVIRVIAH--TQSAKTTTRGVDANEQGAKKVLKGNHLGQKKAHMIEIQINGGDVAAKLNY 212 Query: 86 QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145 K + FT G+ +D G+ G G+ G + R+ L+ R Sbjct: 213 AKSILEKEIK---VADVFTEGEQIDTIGVGKGFGWEGVIHRYGTKRLQ--KKTHRGRRKV 267 Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 G +P RV + G+ G + T N + + Sbjct: 268 ACIGPW-NPARVLWSVARYGQRGCHHRTEMNKRIYRI 303 >gi|154301761|ref|XP_001551292.1| 60S ribosomal protein L3 [Botryotinia fuckeliana B05.10] gi|150855694|gb|EDN30886.1| 60S ribosomal protein L3 [Botryotinia fuckeliana B05.10] Length = 392 Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 51/168 (30%), Gaps = 36/168 (21%) Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K + + V+ + PV S S F +++DV +T G GFSG Sbjct: 173 KQKKAHLMEIQVNGGSVAEKVDFASGLFEKPV--EIS-SIFEQDEMIDVIAVTKGHGFSG 229 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 R L R G P V AG+ G + T N +V + Sbjct: 230 VTSRWGTKKLP--RKTHKGLRKVACIGAW-HPAHVQWTVARAGQDGYHHRTSCNHKVYRI 286 Query: 183 ------------------------------DDKRGLILVKGCVPGAKK 200 + K I++KG VPG KK Sbjct: 287 GRGDDPNNAATEFDVSKKAITPMGGFVRYGEVKNDFIMLKGSVPGVKK 334 >gi|315051194|ref|XP_003174971.1| 60S ribosomal protein L3 [Arthroderma gypseum CBS 118893] gi|311340286|gb|EFQ99488.1| 60S ribosomal protein L3 [Arthroderma gypseum CBS 118893] Length = 412 Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 48/152 (31%), Gaps = 35/152 (23%) Query: 98 FSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGR 156 F ++VDV +T G GFSG R L R G P Sbjct: 224 IDVDSVFEKDEVVDVIAVTKGHGFSGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSH 280 Query: 157 VFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------DDKR 186 V AG+ G + T N ++ + + K Sbjct: 281 VQWTVARAGQDGYHHRTSANHKIYRIGKADDEGNASTDFDVSKKRITPMGGFVRYGEVKN 340 Query: 187 GLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +++KG +PG +K + +R + V+ K Sbjct: 341 DYVMLKGSIPGVRKR-VVTLRKTLWPQVSRKA 371 >gi|123445156|ref|XP_001311341.1| hypothetical protein [Trichomonas vaginalis G3] gi|121893146|gb|EAX98411.1| hypothetical protein TVAG_125550 [Trichomonas vaginalis G3] Length = 415 Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 50/157 (31%), Gaps = 8/157 (5%) Query: 26 TVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV 85 TV+ + G A + GA + N + + ++ + Sbjct: 155 TVIRVIAH--TQSAKTTTRGVDANEQGAKKVLKGNHLGQKKAHMIEIQINGGDVAAKLNY 212 Query: 86 QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145 K + FT G+ +D G+ G G+ G + R+ L+ R Sbjct: 213 AKSILEKEIK---VADVFTEGEQIDTIGVGKGFGWEGVIHRYGTKRLQ--KKTHRGRRKV 267 Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 G +P RV + G+ G + T N + + Sbjct: 268 ACIGPW-NPARVLWSVARYGQRGCHHRTEMNKRIYRI 303 >gi|73973630|ref|XP_868296.1| PREDICTED: similar to ribosomal protein L3 isoform 5 [Canis familiaris] Length = 354 Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 67/203 (33%), Gaps = 31/203 (15%) Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52 + + K GMT + + G ++ VT++ VV GY+ G Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIV-----GYVETPRG 98 Query: 53 ---AGEAKVKNVSKPMRGFFSS--VNVSPKKKLFEFRVQKDDDLLPV--------GSVFS 99 +++S + F K L E +V + V Sbjct: 99 LRTFKTIFAEHISDECKRRFYKNWHKSKKKAHLMEIQVNGGTVAEKLDWARERLEQQVPV 158 Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159 F +++DV G+T GKG+ G R + L R G P RV Sbjct: 159 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAF 215 Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182 + AG+ G + T N ++ + Sbjct: 216 SMARAGQKGYHHRTEINKKIYKI 238 >gi|320583084|gb|EFW97300.1| 60S ribosomal protein L3 [Pichia angusta DL-1] Length = 389 Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 44/148 (29%), Gaps = 34/148 (22%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GF G R L R G P V Sbjct: 207 SVFEQNEMIDVIAVTKGHGFEGVTHRWGTKKLP--RKTHRGTRKVACIGAW-HPSHVMWT 263 Query: 161 KKMAGRMGGNRVTVKNLEVVSVD------------------------------DKRGLIL 190 AG+ G + T N +V + +L Sbjct: 264 VARAGQRGYHHRTSINHKVYRIGKAGDEASGATEFDRTKKTITPMGGFVRYGAVNNDFVL 323 Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +KG +PG K I +R S N + Sbjct: 324 LKGSIPGPVKR-VITLRKSLYGPTNRRA 350 >gi|169861488|ref|XP_001837378.1| 60S ribosomal protein L3 [Coprinopsis cinerea okayama7#130] gi|116501399|gb|EAU84294.1| 60S ribosomal protein L3 [Coprinopsis cinerea okayama7#130] Length = 388 Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 43/140 (30%), Gaps = 34/140 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F + VDV +T G GF G R L R G +F Sbjct: 208 SVFEQDENVDVIAVTKGHGFEGVTHRWGTKKLP--RKTHKGLRKVACIGAWHPSNVMFS- 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSVD------------------------------DKRGLIL 190 AG+ G + T N ++ + K +L Sbjct: 265 VARAGQNGYHHRTEINKKIYRIGLGSDDGNASTESDITKKVITPLGGFPHYGVVKNDFLL 324 Query: 191 VKGCVPGAKKNSWILVRDSF 210 VKG +PG KK I +R S Sbjct: 325 VKGSIPGTKKR-VITIRKSL 343 >gi|327349122|gb|EGE77979.1| hypothetical protein BDDG_00916 [Ajellomyces dermatitidis ATCC 18188] Length = 392 Score = 57.1 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 49/148 (33%), Gaps = 34/148 (22%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GF+G R L R G P V Sbjct: 208 SVFEKDEMIDVIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 AG+ G + T N ++ + + K ++ Sbjct: 265 VARAGQDGYHHRTSCNHKIYRIGKGSDEGNASTEFDVSKKQITPMGGFVRYGEVKNDYVM 324 Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +KG VPG KK + +R + V+ K Sbjct: 325 IKGSVPGVKKR-VLTLRKTLYPQVSRKA 351 >gi|322695627|gb|EFY87432.1| 60S ribosomal protein L3 [Metarhizium acridum CQMa 102] Length = 391 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 42/129 (32%), Gaps = 33/129 (25%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV +T G GF+G R L R G P V Sbjct: 209 IFEQDEMIDVIAVTKGHGFNGVTARWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWTV 265 Query: 162 KMAGRMGGNRVTVKNLEVVSV---DDK---------------------------RGLILV 191 AG+MG + T N +V + D + +++ Sbjct: 266 ARAGQMGYHHRTSVNHKVYRIGKGDAEDSASTEVDVTKKKITPLGGFVRYGEVNNDFVML 325 Query: 192 KGCVPGAKK 200 KG +PG KK Sbjct: 326 KGSIPGVKK 334 >gi|312215801|emb|CBX95753.1| similar to 60S ribosomal protein L3 [Leptosphaeria maculans] Length = 392 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 43/130 (33%), Gaps = 33/130 (25%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T GKG++G R L R G P V Sbjct: 208 SIFEANEMIDVIAVTKGKGYNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPAHVQWT 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 AG+MG + T N ++ + + K +L Sbjct: 265 VARAGQMGYHHRTSVNHKIYRIGKGEDEGNASTEFDVSKKQITPMGGFVRYGEVKNDFLL 324 Query: 191 VKGCVPGAKK 200 +KG PG KK Sbjct: 325 LKGNCPGVKK 334 >gi|156065829|ref|XP_001598836.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980] gi|154691784|gb|EDN91522.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980 UF-70] Length = 392 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 42/130 (32%), Gaps = 33/130 (25%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GFSG R L R G P V Sbjct: 208 SIFEQDEMIDVIAVTKGHGFSGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPAHVQWT 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 AG+ G + T N +V + + K I+ Sbjct: 265 VARAGQDGYHHRTSCNHKVYRIGRGDDPNNAATEFDVSKKAITPMGGFVRYGEVKNDYIM 324 Query: 191 VKGCVPGAKK 200 +KG VPG KK Sbjct: 325 LKGSVPGVKK 334 >gi|310794485|gb|EFQ29946.1| ribosomal protein L3 [Glomerella graminicola M1.001] Length = 391 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 42/130 (32%), Gaps = 33/130 (25%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G G++G R L R G P V Sbjct: 208 SIFEQNEMIDVIAVTTGHGYNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LIL 190 AG+MG + T N +V + D ++ Sbjct: 265 VARAGQMGYHHRTSVNHKVYRIGKGDADDNASTDVDVTKKTITPLGGFVRYGEVKNDFVM 324 Query: 191 VKGCVPGAKK 200 VKG +PG KK Sbjct: 325 VKGSIPGTKK 334 >gi|76496472|ref|NP_001029025.1| 60S ribosomal protein L3 isoform b [Homo sapiens] Length = 354 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 67/203 (33%), Gaps = 31/203 (15%) Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52 + + K GMT + + G ++ VT++ VV GY+ G Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIV-----GYVETPRG 98 Query: 53 ---AGEAKVKNVSKPMRGFFSS--VNVSPKKKLFEFRVQKDDDLLPV--------GSVFS 99 +++S + F K L E +V + V Sbjct: 99 LRTFKTVFAEHISDECKRRFYKNWHKSKKKAHLMEIQVNGGTVAEKLDWARERLEQQVPV 158 Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159 F +++DV G+T GKG+ G R + L R G P RV Sbjct: 159 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAF 215 Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182 + AG+ G + T N ++ + Sbjct: 216 SVARAGQKGYHHRTEINKKIYKI 238 >gi|261195566|ref|XP_002624187.1| 60S ribosomal protein L3 [Ajellomyces dermatitidis SLH14081] gi|239588059|gb|EEQ70702.1| 60S ribosomal protein L3 [Ajellomyces dermatitidis SLH14081] gi|239610450|gb|EEQ87437.1| 60S ribosomal protein L3 [Ajellomyces dermatitidis ER-3] Length = 346 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 49/148 (33%), Gaps = 34/148 (22%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GF+G R L R G P V Sbjct: 162 SVFEKDEMIDVIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 218 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 AG+ G + T N ++ + + K ++ Sbjct: 219 VARAGQDGYHHRTSCNHKIYRIGKGSDEGNASTEFDVSKKQITPMGGFVRYGEVKNDYVM 278 Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +KG VPG KK + +R + V+ K Sbjct: 279 IKGSVPGVKKR-VLTLRKTLYPQVSRKA 305 >gi|193787392|dbj|BAG52598.1| unnamed protein product [Homo sapiens] Length = 354 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 67/203 (33%), Gaps = 31/203 (15%) Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52 + + K GMT + + G ++ VT++ VV GY+ G Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIV-----GYVETPRG 98 Query: 53 ---AGEAKVKNVSKPMRGFFSS--VNVSPKKKLFEFRVQKDDDLLPV--------GSVFS 99 +++S + F K L E +V + V Sbjct: 99 LRTFKTVFAEHISDECKRRFYKNWHKSKKKAHLMEIQVNGGTVAEKLDWARERLEQQVPV 158 Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159 F +++DV G+T GKG+ G R + L R G P RV Sbjct: 159 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVARIGAW-HPARVAF 215 Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182 + AG+ G + T N ++ + Sbjct: 216 SVARAGQKGYHHRTEINKKIYKI 238 >gi|66802278|ref|XP_629921.1| 60S ribosomal protein L3 [Dictyostelium discoideum AX4] gi|464637|sp|P34113|RL3_DICDI RecName: Full=60S ribosomal protein L3 gi|167816|gb|AAA99508.1| ribosomal protein [Dictyostelium discoideum] gi|60463269|gb|EAL61461.1| 60S ribosomal protein L3 [Dictyostelium discoideum AX4] Length = 398 Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 47/137 (34%), Gaps = 38/137 (27%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +L+DV G+T GKGF+G +KR L R G P RV Sbjct: 211 VFAENELIDVIGVTKGKGFNGVIKRWGVRKLP--RKTHKGLRKVACIGAW-HPSRVSTTV 267 Query: 162 KMAGRMGGNRVTVKNLEVVSV-----------------------------------DDKR 186 AG++G + +N ++ + K Sbjct: 268 PRAGQLGYHHRVERNKKIYRIGQAQPEDGKQISTGKTEFDLTEKTINPMGGFAHYGMVKH 327 Query: 187 GLILVKGCVPGAKKNSW 203 +++KGCV G +K + Sbjct: 328 EFLMLKGCVAGPRKRAL 344 >gi|296236923|ref|XP_002763539.1| PREDICTED: 60S ribosomal protein L3-like isoform 2 [Callithrix jacchus] Length = 354 Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 67/203 (33%), Gaps = 31/203 (15%) Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52 + + K GMT + + G ++ VT++ VV GY+ G Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIV-----GYVETPRG 98 Query: 53 ---AGEAKVKNVSKPMRGFFSS--VNVSPKKKLFEFRVQKDDDLLPV--------GSVFS 99 +++S + F K L E +V + V Sbjct: 99 LRTFKTVFAEHISDECKRRFYKNWHKSKKKAHLMEIQVNGGTVSEKLDWARERLEQQVPV 158 Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159 F +++DV G+T GKG+ G R + L R G P RV Sbjct: 159 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAF 215 Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182 + AG+ G + T N ++ + Sbjct: 216 SVARAGQKGYHHRTEINKKIYKI 238 >gi|261327490|emb|CBH10465.1| ribosomal protein L3, putative [Trypanosoma brucei gambiense DAL972] Length = 480 Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 74/305 (24%), Gaps = 105/305 (34%) Query: 6 VARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH----------------- 38 + K GMT + + G ++ PVT+L VV Sbjct: 98 MVYKAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVW 157 Query: 39 ---------RTLDKNGYMAVQVGAGEAK-----------VKNVSKPMRG----------- 67 R KN + Q+ + K K Sbjct: 158 AHHTSVEFRRRFYKNWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFEKKADIIRVVAHT 217 Query: 68 FFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP------------SYFTVGQLVDVTGMT 115 + + + + + S F + DV +T Sbjct: 218 QLRKLRNNRVGVKKAHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAVT 277 Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175 G GF+G +KR L R G P RV AG+ G + T Sbjct: 278 KGHGFTGVVKRWGVACLP--RKTHRGLRKVACIGAW-HPSRVMYTVARAGQHGYHHRTHL 334 Query: 176 NLEVVSVD--------------------------------DKRGLILVKGCVPGAKKNSW 203 N ++ + + +++KG V G ++ Sbjct: 335 NKKIYQLGRAVSMEPNQATTAYDLTAKTITPMGGFVGYGTVRNDYVMLKGSVAGPRRRVI 394 Query: 204 ILVRD 208 L R Sbjct: 395 TLRRP 399 >gi|242219392|ref|XP_002475476.1| 60S ribosomal protein L3 [Postia placenta Mad-698-R] gi|220725335|gb|EED79327.1| 60S ribosomal protein L3 [Postia placenta Mad-698-R] Length = 388 Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 45/139 (32%), Gaps = 34/139 (24%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F ++VDV +T G GF G R L R G P +V + Sbjct: 209 VFEQDEVVDVIAVTKGHGFEGVTHRWGTKKLP--RKTHKGLRKVACIGAW-HPSKVMFSV 265 Query: 162 KMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLILV 191 AG+ G + T N ++ + K +++ Sbjct: 266 ARAGQNGYHHRTELNKKIYRIGSGEDTGNASTEHDITKKVITPMGGFPHYGIVKNDYLML 325 Query: 192 KGCVPGAKKNSWILVRDSF 210 KG +PG KK I +R S Sbjct: 326 KGSIPGTKKR-VITIRKSL 343 >gi|331233068|ref|XP_003329195.1| 60S ribosomal protein L3 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309308185|gb|EFP84776.1| 60S ribosomal protein L3 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 388 Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 33/140 (23%), Positives = 45/140 (32%), Gaps = 34/140 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F + +DV +T GKG+ G R L R G P +V Sbjct: 208 SVFEQNENIDVIAVTKGKGYEGVTHRWGCKKLP--RKTHKGLRKVACIGAW-HPSKVMFT 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSVD------------------------------DKRGLIL 190 AG+ G + T N +V V K ++ Sbjct: 265 VARAGQDGYHHRTELNKKVFRVGKGGDEANATTEFDTTTKAITPMGGFVRYGVVKNDFLM 324 Query: 191 VKGCVPGAKKNSWILVRDSF 210 +KG VPG KK I +R S Sbjct: 325 LKGSVPGVKKR-VITLRKSL 343 >gi|209875731|ref|XP_002139308.1| 60S ribosomal protein L3 [Cryptosporidium muris RN66] gi|209554914|gb|EEA04959.1| 60S ribosomal protein L3, putative [Cryptosporidium muris RN66] Length = 390 Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F+ +++DV G++ GKG+ G + R L R G P RV Sbjct: 206 SIFSENEMIDVIGISKGKGYKGVISRWGVTKLP--RKTRRGVRKVSCIGAW-HPARVQFQ 262 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 263 VPRAGQKGYGQRTEMNKKIYRI 284 >gi|72387810|ref|XP_844329.1| ribosomal protein L3 [Trypanosoma brucei TREU927] gi|62359480|gb|AAX79917.1| ribosomal protein L3, putative [Trypanosoma brucei] gi|70800862|gb|AAZ10770.1| ribosomal protein L3, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 480 Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 74/305 (24%), Gaps = 105/305 (34%) Query: 6 VARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH----------------- 38 + K GMT + + G ++ PVT+L VV Sbjct: 98 MVYKAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVW 157 Query: 39 ---------RTLDKNGYMAVQVGAGEAK-----------VKNVSKPMRG----------- 67 R KN + Q+ + K K Sbjct: 158 AHHTSVEFRRRFYKNWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFEKKADIIRVVAHT 217 Query: 68 FFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP------------SYFTVGQLVDVTGMT 115 + + + + + S F + DV +T Sbjct: 218 QLRKLRNNRVGVKKAHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAVT 277 Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175 G GF+G +KR L R G P RV AG+ G + T Sbjct: 278 KGHGFTGVVKRWGVACLP--RKTHRGLRKVACIGAW-HPSRVMYTVARAGQHGYHHRTHL 334 Query: 176 NLEVVSVD--------------------------------DKRGLILVKGCVPGAKKNSW 203 N ++ + + +++KG V G ++ Sbjct: 335 NKKIYQLGRAVSMEPNQATTAYDLTAKTITPMGGFVGYGTVRNDYVMLKGSVAGPRRRVI 394 Query: 204 ILVRD 208 L R Sbjct: 395 TLRRP 399 >gi|71652016|ref|XP_814673.1| ribosomal protein L3 [Trypanosoma cruzi strain CL Brener] gi|71652018|ref|XP_814674.1| ribosomal protein L3 [Trypanosoma cruzi strain CL Brener] gi|70879667|gb|EAN92822.1| ribosomal protein L3, putative [Trypanosoma cruzi] gi|70879668|gb|EAN92823.1| ribosomal protein L3, putative [Trypanosoma cruzi] Length = 428 Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 82/302 (27%), Gaps = 105/302 (34%) Query: 9 KLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------------- 38 K GMT + + G ++ PVT+L VV Sbjct: 50 KAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHH 109 Query: 39 ------RTLDKNGYMAVQVGAGEAKVKNVS--------KPMRGFFSSVNV---------- 74 R KN + Q+ + K + + ++ F ++ Sbjct: 110 TSVEFRRRFYKNWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFAKKADIIRVVAHTQLR 169 Query: 75 --------SPKKKLFEFRVQKD--DDLLPVGSVFSP------SYFTVGQLVDVTGMTIGK 118 K + E ++ + + + S F + DV +T G Sbjct: 170 KLRNNRVGVKKAHVSEIQINGGTIAEKIELAKSLLEKEVRIDSIFQQSETCDVCAVTKGH 229 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF+G +KR L R G P RV AG+ G + T N + Sbjct: 230 GFTGVVKRWGVACLP--RKTHRGLRKVACIGAW-HPARVMYTVARAGQHGYHHRTHLNKK 286 Query: 179 VVSVD--------------------------------DKRGLILVKGCVPGAKKNSWILV 206 + + + I++KG V G ++ L Sbjct: 287 IYQLGRAVSMEPNQATTTYDLTAKSITPMGGFVGYGTVRNDYIMLKGSVAGPRRRVITLR 346 Query: 207 RD 208 R Sbjct: 347 RP 348 >gi|149240189|ref|XP_001525970.1| 60S ribosomal protein L3 [Lodderomyces elongisporus NRRL YB-4239] gi|146450093|gb|EDK44349.1| 60S ribosomal protein L3 [Lodderomyces elongisporus NRRL YB-4239] Length = 389 Score = 56.3 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 44/145 (30%), Gaps = 35/145 (24%) Query: 97 VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 S F +++DV +T G GF G R L R G P Sbjct: 202 EVSVDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPA 258 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------DDK 185 V AG+ G + T N +V V + Sbjct: 259 NVNWTVARAGQNGYHHRTSINHKVYRVGKGGDESNGATEFDRTKKTINPMGGFVRYGNVN 318 Query: 186 RGLILVKGCVPGAKKNSWILVRDSF 210 +L+KG +PG KK + +R S Sbjct: 319 NDFVLLKGSIPGVKKR-IVTLRKSL 342 >gi|50311593|ref|XP_455822.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|74660266|sp|Q6CJR7|RL3_KLULA RecName: Full=60S ribosomal protein L3 gi|49644958|emb|CAG98530.1| KLLA0F16511p [Kluyveromyces lactis] Length = 387 Score = 56.3 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 47/140 (33%), Gaps = 34/140 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GF G R L R G P V + Sbjct: 207 SVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPAHVMWS 263 Query: 161 KKMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LIL 190 AG+ G + T N +V V DD+ ++ Sbjct: 264 VARAGQRGYHHRTSINHKVYRVGKGDDEANAATEFDRTKKTITPMGGFVHYGAINNDFVI 323 Query: 191 VKGCVPGAKKNSWILVRDSF 210 +KG +PG +K + +R S Sbjct: 324 LKGSIPGTRKR-VVTLRKSL 342 >gi|74694166|sp|Q759R7|RL3_ASHGO RecName: Full=60S ribosomal protein L3 Length = 388 Score = 56.3 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 43/140 (30%), Gaps = 34/140 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GF G R L R G P V Sbjct: 208 SVFEQNEMIDVIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPAHVMWT 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSVD------------------------------DKRGLIL 190 AG+ G + T N +V + ++ Sbjct: 265 VARAGQNGYHHRTSINHKVYRIGKGGDEGNAATEFDRTKKTITPMGGFVHYGAVNNDFVM 324 Query: 191 VKGCVPGAKKNSWILVRDSF 210 VKG +PG +K + +R S Sbjct: 325 VKGSIPGTRKR-VVTLRKSL 343 >gi|295674007|ref|XP_002797549.1| 60S ribosomal protein L3 [Paracoccidioides brasiliensis Pb01] gi|226280199|gb|EEH35765.1| 60S ribosomal protein L3 [Paracoccidioides brasiliensis Pb01] gi|226286840|gb|EEH42353.1| 60S ribosomal protein L3 [Paracoccidioides brasiliensis Pb18] Length = 392 Score = 56.3 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 49/148 (33%), Gaps = 34/148 (22%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GF+G R L R G P V Sbjct: 208 SVFEQDEMIDVIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 AG+ G + T N ++ + + K ++ Sbjct: 265 VARAGQDGYHHRTSCNHKIYRIGKGSDEGNASTEFDVSKKQITPMGGFVRYGEVKNDYVM 324 Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +KG VPG KK + +R + V+ K Sbjct: 325 LKGSVPGVKKR-VLTLRKTLYPQVSRKA 351 >gi|225684621|gb|EEH22905.1| 60S ribosomal protein L3 [Paracoccidioides brasiliensis Pb03] Length = 384 Score = 56.3 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 49/148 (33%), Gaps = 34/148 (22%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GF+G R L R G P V Sbjct: 200 SVFEQDEMIDVIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 256 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 AG+ G + T N ++ + + K ++ Sbjct: 257 VARAGQDGYHHRTSCNHKIYRIGKGSDEGNASTEFDVSKKQITPMGGFVRYGEVKNDYVM 316 Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +KG VPG KK + +R + V+ K Sbjct: 317 LKGSVPGVKKR-VLTLRKTLYPQVSRKA 343 >gi|164659874|ref|XP_001731061.1| hypothetical protein MGL_2060 [Malassezia globosa CBS 7966] gi|159104959|gb|EDP43847.1| hypothetical protein MGL_2060 [Malassezia globosa CBS 7966] Length = 345 Score = 56.3 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 47/141 (33%), Gaps = 34/141 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S FT +LVDV G+T GKG+ G R L R G +F Sbjct: 162 SLFTQDELVDVIGVTKGKGYEGVTARWGITKLP--RKTHKGLRKVACIGAWHPANVMFT- 218 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 +G+ G + T N ++ + K ++ Sbjct: 219 VARSGQDGYHHRTELNKKIYRIGNGADKASGATEFDTTQKSITPMGGFPHYGIVKNDFLM 278 Query: 191 VKGCVPGAKKNSWILVRDSFK 211 +KG PG KK + +R S K Sbjct: 279 IKGSCPGVKKR-VLTIRKSQK 298 >gi|302307578|ref|NP_984302.2| ADR206Wp [Ashbya gossypii ATCC 10895] gi|299789066|gb|AAS52126.2| ADR206Wp [Ashbya gossypii ATCC 10895] Length = 387 Score = 56.3 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 43/140 (30%), Gaps = 34/140 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GF G R L R G P V Sbjct: 207 SVFEQNEMIDVIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPAHVMWT 263 Query: 161 KKMAGRMGGNRVTVKNLEVVSVD------------------------------DKRGLIL 190 AG+ G + T N +V + ++ Sbjct: 264 VARAGQNGYHHRTSINHKVYRIGKGGDEGNAATEFDRTKKTITPMGGFVHYGAVNNDFVM 323 Query: 191 VKGCVPGAKKNSWILVRDSF 210 VKG +PG +K + +R S Sbjct: 324 VKGSIPGTRKR-VVTLRKSL 342 >gi|126649185|ref|XP_001388265.1| hypothetical protein [Cryptosporidium parvum Iowa II] gi|126117187|gb|EAZ51287.1| hypothetical protein cgd5_1580 [Cryptosporidium parvum Iowa II] gi|323508581|dbj|BAJ77184.1| cgd5_1580 [Cryptosporidium parvum] gi|323509637|dbj|BAJ77711.1| cgd5_1580 [Cryptosporidium parvum] Length = 305 Score = 56.3 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 8/100 (8%) Query: 83 FRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISH 142 F V+ + +PV + F +++D+ G++ GKG+ G + R L Sbjct: 110 FCVRCFEQPIPVST-----IFNENEMIDIIGISKGKGYKGVISRWGVTKLP--RKTRRGV 162 Query: 143 RSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 R G P RV AG+ G + T N ++ + Sbjct: 163 RKVSCIGAW-HPARVQFQVPRAGQKGYGQRTETNKKIYRI 201 >gi|330907574|ref|XP_003295853.1| hypothetical protein PTT_03505 [Pyrenophora teres f. teres 0-1] gi|311332456|gb|EFQ96051.1| hypothetical protein PTT_03505 [Pyrenophora teres f. teres 0-1] Length = 392 Score = 56.3 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 46/139 (33%), Gaps = 34/139 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G G++G R L R G P V Sbjct: 208 SIFEANEMIDVIAVTKGHGYNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPAHVQWT 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 AG+MG + T N ++ + + K +L Sbjct: 265 VARAGQMGYHHRTSVNHKIYRIGKADDEGNASTEFDVSKKRITPMGGFVRYGEVKNDFVL 324 Query: 191 VKGCVPGAKKNSWILVRDS 209 +KG PG KK + +R S Sbjct: 325 LKGNCPGVKKR-VVTLRKS 342 >gi|255725262|ref|XP_002547560.1| 60S ribosomal protein L3 [Candida tropicalis MYA-3404] gi|240135451|gb|EER35005.1| 60S ribosomal protein L3 [Candida tropicalis MYA-3404] Length = 389 Score = 56.3 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 45/145 (31%), Gaps = 35/145 (24%) Query: 97 VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 S F +++DV +T G GF G R L R G P Sbjct: 202 EVSVDSVFEQDEMIDVIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPA 258 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------DDK 185 V AG+ G + T N +V V + + Sbjct: 259 NVNWTVARAGQNGYHHRTSINHKVYRVGKGSDEANGATEFDRTKKTINPMGGFVRYGNVQ 318 Query: 186 RGLILVKGCVPGAKKNSWILVRDSF 210 +L+KG +PG KK + +R S Sbjct: 319 NDFVLLKGSIPGIKKR-VVTLRKSL 342 >gi|67594775|ref|XP_665877.1| hypothetical protein [Cryptosporidium hominis TU502] gi|54656728|gb|EAL35641.1| hypothetical protein Chro.50225 [Cryptosporidium hominis] Length = 305 Score = 56.3 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 8/100 (8%) Query: 83 FRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISH 142 F V+ + +PV + F +++D+ G++ GKG+ G + R L Sbjct: 110 FCVRCFEQPIPVST-----IFNENEMIDIIGISKGKGYKGVISRWGVTKLP--RKTRRGV 162 Query: 143 RSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 R G P RV AG+ G + T N ++ + Sbjct: 163 RKVSCIGAW-HPARVQFQVPRAGQKGYGQRTETNKKIYRI 201 >gi|146331892|gb|ABQ22452.1| mitochondrial 39S ribosomal protein L3-like protein [Callithrix jacchus] Length = 76 Score = 55.9 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215 V ++ K +I V G VPG KN + VRDS A Sbjct: 1 VWRINTKHNIIYVNGSVPG-HKNCLVKVRDSKLPAYK 36 >gi|320586035|gb|EFW98714.1| 60S ribosomal protein L3 [Grosmannia clavigera kw1407] Length = 442 Score = 55.9 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 44/140 (31%), Gaps = 34/140 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GF G R L R G P V Sbjct: 258 SIFEQDEVIDVIAVTKGHGFEGVTARWGTKKLP--RKTHKGLRKVACIGAW-HPAHVQWT 314 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 AG+ G + T N ++ + + ++ Sbjct: 315 VARAGQRGYHHRTSVNHKIYRIGKGGSDDNASTDLDVTKKTITPLGGFVRYGEINNDFVM 374 Query: 191 VKGCVPGAKKNSWILVRDSF 210 VKG +PG KK + +R S Sbjct: 375 VKGSIPGTKKR-VVTLRKSL 393 >gi|170111497|ref|XP_001886952.1| predicted protein [Laccaria bicolor S238N-H82] gi|164637995|gb|EDR02275.1| predicted protein [Laccaria bicolor S238N-H82] Length = 388 Score = 55.9 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 44/139 (31%), Gaps = 34/139 (24%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F + VDV +T G GF G R L R G P +V + Sbjct: 209 VFEQDECVDVIAVTKGHGFEGVTHRWGTKKLP--RKTHKGLRKVACIGAW-HPSKVMFSV 265 Query: 162 KMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLILV 191 AG+ G + T N ++ + K +++ Sbjct: 266 ARAGQNGYHHRTELNKKIYRIGSGTDEANASTESDITNKSITPMGGFPHYGIVKNDFLML 325 Query: 192 KGCVPGAKKNSWILVRDSF 210 KG +PG KK I +R S Sbjct: 326 KGSIPGTKKR-VITIRKSL 343 >gi|154282025|ref|XP_001541825.1| 60S ribosomal protein L3 [Ajellomyces capsulatus NAm1] gi|150412004|gb|EDN07392.1| 60S ribosomal protein L3 [Ajellomyces capsulatus NAm1] Length = 346 Score = 55.9 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 41/129 (31%), Gaps = 33/129 (25%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV +T G GF+G R L R G P V Sbjct: 163 IFEKDEMIDVIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWTV 219 Query: 162 KMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLILV 191 AG+ G + T N ++ + + K +++ Sbjct: 220 ARAGQDGYHHRTSCNHKIYRIGKGSDEGNASTEFDVSKKQITPMGGFVRYGEVKNDYVMI 279 Query: 192 KGCVPGAKK 200 KG VPG KK Sbjct: 280 KGSVPGVKK 288 >gi|323510289|dbj|BAJ78038.1| cgd5_1580 [Cryptosporidium parvum] Length = 388 Score = 55.9 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 8/100 (8%) Query: 83 FRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISH 142 F V+ + +PV + F +++D+ G++ GKG+ G + R L Sbjct: 193 FCVRCFEQPIPVST-----IFNENEMIDIIGISKGKGYKGVISRWGVTKLP--RKTRRGV 245 Query: 143 RSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 R G P RV AG+ G + T N ++ + Sbjct: 246 RKVSCIGAW-HPARVQFQVPRAGQKGYGQRTETNKKIYRI 284 >gi|240275987|gb|EER39500.1| large subunit ribosomal protein L3 [Ajellomyces capsulatus H143] gi|325093348|gb|EGC46658.1| large subunit ribosomal protein L3 [Ajellomyces capsulatus H88] Length = 439 Score = 55.9 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 48/147 (32%), Gaps = 34/147 (23%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV +T G GF+G R L R G P V Sbjct: 256 IFEKDEMIDVIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWTV 312 Query: 162 KMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLILV 191 AG+ G + T N ++ + + + +++ Sbjct: 313 ARAGQDGYHHRTSCNHKIYRIGKGSDEGNASTEFDVSKKQITPMGGFVRYGEVRNDYVMI 372 Query: 192 KGCVPGAKKNSWILVRDSFKSAVNCKG 218 KG VPG KK + +R + V+ + Sbjct: 373 KGSVPGVKKR-VLTLRKTLYPQVSRRA 398 >gi|328852642|gb|EGG01786.1| hypothetical protein MELLADRAFT_45021 [Melampsora larici-populina 98AG31] Length = 388 Score = 55.9 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 33/140 (23%), Positives = 44/140 (31%), Gaps = 34/140 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F + +DV +T GKGF G R L R G P +V Sbjct: 208 SIFEQDENIDVIAVTKGKGFEGVTHRWGTKKLP--RKTHKGLRKVACIGAW-HPSKVMFT 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSVD------------------------------DKRGLIL 190 AG+ G + T N +V V ++ Sbjct: 265 VARAGQNGYHHRTELNKKVFRVGKGGDEANATTEFDTTKKAITPMGGFVRYGVVNNDFLM 324 Query: 191 VKGCVPGAKKNSWILVRDSF 210 +KG VPG KK I +R S Sbjct: 325 LKGSVPGVKKR-VITLRKSL 343 >gi|241952212|ref|XP_002418828.1| ribosomal protein, large subunit, putative [Candida dubliniensis CD36] gi|223642167|emb|CAX44134.1| ribosomal protein, large subunit, putative [Candida dubliniensis CD36] Length = 389 Score = 55.9 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 44/145 (30%), Gaps = 35/145 (24%) Query: 97 VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 S F +++DV +T G GF G R L R G P Sbjct: 202 EVSVDSVFEQDEMIDVIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPA 258 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------DDK 185 V AG+ G + T N +V V + Sbjct: 259 NVNWTVARAGQNGYHHRTSINHKVYRVGKGSDEANGATEFDRTKKTINPMGGFVRYGNVN 318 Query: 186 RGLILVKGCVPGAKKNSWILVRDSF 210 +L+KG +PG KK + +R S Sbjct: 319 NDFVLLKGSIPGVKKR-VVTLRKSL 342 >gi|68491020|ref|XP_710682.1| likely cytosolic ribosomal protein L3 [Candida albicans SC5314] gi|68491039|ref|XP_710673.1| likely cytosolic ribosomal protein L3 [Candida albicans SC5314] gi|46431906|gb|EAK91425.1| likely cytosolic ribosomal protein L3 [Candida albicans SC5314] gi|46431916|gb|EAK91434.1| likely cytosolic ribosomal protein L3 [Candida albicans SC5314] gi|238883805|gb|EEQ47443.1| 60S ribosomal protein L3 [Candida albicans WO-1] Length = 389 Score = 55.9 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 44/145 (30%), Gaps = 35/145 (24%) Query: 97 VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 S F +++DV +T G GF G R L R G P Sbjct: 202 EVSVDSVFEQDEMIDVIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPA 258 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------DDK 185 V AG+ G + T N +V V + Sbjct: 259 NVNWTVARAGQNGYHHRTSINHKVYRVGKGTDEANGATEFDRTKKTINPMGGFVRYGNVN 318 Query: 186 RGLILVKGCVPGAKKNSWILVRDSF 210 +L+KG +PG KK + +R S Sbjct: 319 NDFVLLKGSIPGVKKR-VVTLRKSL 342 >gi|255946257|ref|XP_002563896.1| Pc20g14180 [Penicillium chrysogenum Wisconsin 54-1255] gi|211588631|emb|CAP86747.1| Pc20g14180 [Penicillium chrysogenum Wisconsin 54-1255] Length = 392 Score = 55.9 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 42/130 (32%), Gaps = 33/130 (25%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GFSG R L R G P V Sbjct: 208 SIFEKDEMIDVIAVTKGHGFSGVTSRWGTTKLP--RKTHKGLRKVACIGAW-HPNHVQWT 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 AG+ G + T N +V + + K ++ Sbjct: 265 VARAGQDGYHHRTSCNHKVFRIGKGTDEGNASTEFDISKKQITPMGGFVHYGEVKNDFVM 324 Query: 191 VKGCVPGAKK 200 VKG +PG KK Sbjct: 325 VKGSIPGVKK 334 >gi|281204054|gb|EFA78250.1| 60S ribosomal protein L3 [Polysphondylium pallidum PN500] Length = 399 Score = 55.5 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 3/87 (3%) Query: 96 SVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 +V S F +++D+ G+T GKGF+G +KR L R G P Sbjct: 203 TVTVESVFAENEMIDIIGVTKGKGFNGVIKRWGVRKLP--RKTHKGLRKVACIGAW-HPS 259 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV 182 RV AG++G + N ++ + Sbjct: 260 RVSTAVPRAGQLGYHHRVETNKKIYRI 286 >gi|300121321|emb|CBK21701.2| unnamed protein product [Blastocystis hominis] gi|300123206|emb|CBK24479.2| unnamed protein product [Blastocystis hominis] gi|300176312|emb|CBK23623.2| unnamed protein product [Blastocystis hominis] gi|300176758|emb|CBK25327.2| unnamed protein product [Blastocystis hominis] Length = 387 Score = 55.5 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 48/141 (34%), Gaps = 34/141 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F +++D G+T GKGF G R L R G P RV Sbjct: 209 DVFEPSEMIDTIGVTKGKGFEGVTTRWGTTRLP--RKTHRGLRKVACIGAW-HPSRVHFT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSVD--------------DKRGL----------------IL 190 AG+ G + T N ++ + ++ + I+ Sbjct: 266 VPRAGQNGYHHRTDVNKKIYRIGAAGDAKSASTEADLTEKSITPMGGFPHYGEVNNDWIM 325 Query: 191 VKGCVPGAKKNSWILVRDSFK 211 VKG V G+KK I +R S + Sbjct: 326 VKGGVMGSKKR-VITLRKSLR 345 >gi|78190647|gb|ABB29645.1| ribosomal protein 3 large subunit [Suberites fuscus] Length = 313 Score = 55.5 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 47/130 (36%), Gaps = 18/130 (13%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F +++D+ G+T GKGF G R + L R G P RV + Sbjct: 155 DLFNKDEMIDIIGVTKGKGFKGVTSRWHCKKLP--RKTHKGLRKVACIGAW-HPSRVSFS 211 Query: 161 KKMAGRMGGNRVTVKNLEVVSV-DDKRGL------------ILVKGCVP--GAKKNSWIL 205 AG+ G + T N ++ + D + I G P G KN +++ Sbjct: 212 VARAGQKGYHHRTEINKKIYRIGDKEDNANAATEFDPTEKRITPVGGFPHYGTVKNDFVM 271 Query: 206 VRDSFKSAVN 215 ++ + Sbjct: 272 LKGAVVGPKR 281 >gi|146417684|ref|XP_001484810.1| 60S ribosomal protein L3 [Meyerozyma guilliermondii ATCC 6260] gi|146390283|gb|EDK38441.1| 60S ribosomal protein L3 [Meyerozyma guilliermondii ATCC 6260] Length = 389 Score = 55.5 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 44/145 (30%), Gaps = 35/145 (24%) Query: 97 VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 + F +++DV +T G GF G R L R G P Sbjct: 202 TVTVDSVFEQNEMIDVIAVTRGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPA 258 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------DDK 185 V AG+ G + T N +V V + Sbjct: 259 NVNWTVARAGQNGYHHRTSINHKVYRVGSGADESNGATEFDRTKKSINPMGGFVRYGNVN 318 Query: 186 RGLILVKGCVPGAKKNSWILVRDSF 210 ++VKG +PG KK + +R S Sbjct: 319 NDFVMVKGSIPGTKKR-VVTLRKSL 342 >gi|164424622|ref|XP_963317.2| 60S ribosomal protein L3 [Neurospora crassa OR74A] gi|30580497|sp|P59671|RL3_NEUCR RecName: Full=60S ribosomal protein L3 gi|28881190|emb|CAD70371.1| probable 60s ribosomal protein l3 (rpl3) [Neurospora crassa] gi|157070591|gb|EAA34081.2| 60S ribosomal protein L3 [Neurospora crassa OR74A] Length = 392 Score = 55.5 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 42/130 (32%), Gaps = 33/130 (25%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GF+G R L R G P V Sbjct: 208 SIFEKDEVIDVIAVTKGHGFTGVTARWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSV---DDK---------------------------RGLIL 190 AG+ G + T N ++ + D + ++ Sbjct: 265 VARAGQAGYHHRTSVNHKIYRIGKGDAEDSAATEVDVTKKKITPMGGFVRYGEINNDFVM 324 Query: 191 VKGCVPGAKK 200 VKG VPG KK Sbjct: 325 VKGSVPGVKK 334 >gi|126136060|ref|XP_001384554.1| 60S large subunit ribosomal protein L3.e [Scheffersomyces stipitis CBS 6054] gi|126091752|gb|ABN66525.1| 60S large subunit ribosomal protein L3.e [Scheffersomyces stipitis CBS 6054] Length = 389 Score = 55.2 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 44/140 (31%), Gaps = 34/140 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GF G R L R G P V Sbjct: 207 SVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPANVNWT 263 Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDK------------------------------RGLIL 190 AG+ G + T N +V V + +L Sbjct: 264 VARAGQNGYHHRTSINHKVYRVGTEGDESSGATEFDRTKKTINPMGGFVRYGNVNNDFVL 323 Query: 191 VKGCVPGAKKNSWILVRDSF 210 +KG +PG +K + +R S Sbjct: 324 LKGSIPGIRKR-VVTLRKSL 342 >gi|145340549|ref|XP_001415385.1| Ribosomal protein L3, component of cytosolic 80S ribosome and 60S large subunit [Ostreococcus lucimarinus CCE9901] gi|144575608|gb|ABO93677.1| Ribosomal protein L3, component of cytosolic 80S ribosome and 60S large subunit [Ostreococcus lucimarinus CCE9901] Length = 386 Score = 55.2 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 47/140 (33%), Gaps = 35/140 (25%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++D+ G+T GKG+ G + R L R G G P RV Sbjct: 207 VFQQDEMIDLIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVGCIGAW-HPSRVSYTV 263 Query: 162 KMAGRMGGNRVTVKNLEVVSV-------------------------------DDKRGLIL 190 AG+ G + T N +V + K ++ Sbjct: 264 ARAGQHGYHHRTEINKKVYKIGKAGQDSFGASTFHDPTEKEITPMGGFAHYGIVKHDYVM 323 Query: 191 VKGCVPGAKKNSWILVRDSF 210 +KG V G +K I +R S Sbjct: 324 IKGGVVGPRKR-LITMRQSL 342 >gi|119190755|ref|XP_001245984.1| hypothetical protein CIMG_05425 [Coccidioides immitis RS] gi|303315241|ref|XP_003067628.1| 60S ribosomal protein L3, putative [Coccidioides posadasii C735 delta SOWgp] gi|240107298|gb|EER25483.1| 60S ribosomal protein L3, putative [Coccidioides posadasii C735 delta SOWgp] gi|320035569|gb|EFW17510.1| 60S ribosomal protein L3 [Coccidioides posadasii str. Silveira] Length = 392 Score = 55.2 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 47/148 (31%), Gaps = 34/148 (22%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GF G R L R G P V Sbjct: 208 SVFEQDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 AG+ G + T N ++ + + K I+ Sbjct: 265 VARAGQDGYHHRTSVNHKIYRIGKGSDEGNASTDFDVSKKQITPMGGFVRYGEVKNDFII 324 Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +KG PG KK + +R + V+ K Sbjct: 325 LKGSCPGVKKR-VLTLRKTLFPQVSRKA 351 >gi|125535904|gb|EAY82392.1| hypothetical protein OsI_37606 [Oryza sativa Indica Group] Length = 733 Score = 55.2 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 4/87 (4%) Query: 97 VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 F +++D+ G+T GKG+ G + R L R G P Sbjct: 549 EIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPA 605 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV 182 RV AG+ G + T N +V + Sbjct: 606 RVSYTVARAGQNGYHHRTEMNKKVYKI 632 >gi|326509435|dbj|BAJ91634.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 388 Score = 54.8 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 33/135 (24%), Positives = 45/135 (33%), Gaps = 33/135 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F Q++DV G+T G G G R L R G P V + Sbjct: 208 SIFEQNQVIDVIGVTSGHGTEGVTHRWGVTRLP--RKTHRGLRKVACIGAW-HPSNVMYS 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSV----DDKRG--------------------------LIL 190 AG+ G + T KN ++ + D K G ++ Sbjct: 265 VPRAGQNGYHHRTEKNKKIYRIGTGSDVKSGSTEYDISDKTITPMGGFPHYGIVNEDFVM 324 Query: 191 VKGCVPGAKKNSWIL 205 VKG VPG K +L Sbjct: 325 VKGGVPGTLKRPLVL 339 >gi|189204215|ref|XP_001938443.1| 60S ribosomal protein L3 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187985542|gb|EDU51030.1| 60S ribosomal protein L3 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 392 Score = 54.8 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 42/130 (32%), Gaps = 33/130 (25%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G G++G R L R G P V Sbjct: 208 SIFEANEMIDVIAVTKGHGYNGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPAHVQWT 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 AG+MG + T N ++ + + K +L Sbjct: 265 VARAGQMGYHHRTSVNHKIYRIGKADDEGNASTEFDVSKKRITPMGGFVRYGEVKNDFVL 324 Query: 191 VKGCVPGAKK 200 +KG PG KK Sbjct: 325 LKGNCPGVKK 334 >gi|15220533|ref|NP_176352.1| RPL3B (R-PROTEIN L3 B); structural constituent of ribosome [Arabidopsis thaliana] gi|21542436|sp|P22738|RL32_ARATH RecName: Full=60S ribosomal protein L3-2 gi|4585874|gb|AAD25547.1|AC005850_4 60s ribosomal protein L3 [Arabidopsis thaliana] gi|28392966|gb|AAO41918.1| putative ribosomal protein [Arabidopsis thaliana] gi|28973595|gb|AAO64122.1| putative ribosomal protein [Arabidopsis thaliana] gi|332195738|gb|AEE33859.1| 60S ribosomal protein L3-2 [Arabidopsis thaliana] Length = 390 Score = 54.8 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 44/132 (33%), Gaps = 6/132 (4%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + + K + + + ++ + V L F +++D Sbjct: 163 LAHTQIRKMKGLKQKKAHLNEIQINGGDIAKK--VDYACSLFEKQVPVDA-IFQKDEMID 219 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 + G+T GKG+ G + R L R G P RV AG+ G + Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYTVARAGQNGYH 276 Query: 171 RVTVKNLEVVSV 182 T N +V V Sbjct: 277 HRTEMNKKVYRV 288 >gi|7417236|gb|AAF62506.1| ribosomal protein L3 [Trypanoplasma borreli] Length = 416 Score = 54.8 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 81/301 (26%), Gaps = 106/301 (35%) Query: 9 KLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------------- 38 K GMT + + G ++ PVT+L +V Sbjct: 50 KAGMTHIVRDLDRPGSKMNKKEVVEPVTILEAPPMAIVGVTGYRETAVGYKCIGTVWAHH 109 Query: 39 ------RTLDKNGYMAVQVGA-----------GEAKVKNVSKPMRGFFSSVNVSPKKKLF 81 R KN + Q+ G+ + V K ++ + + V +L Sbjct: 110 VSQEFRRRYYKNWKQSAQLAFTKRKSFIRSKNGKVAEQRVLKALKDKATVIRVIAHTQLR 169 Query: 82 EFRVQKDDDLLPVGSVFSP-----------------------SYFTVGQLVDVTGMTIGK 118 + R + + S F + DV +T G Sbjct: 170 KLRNHRVGNKKAHIQEIQVNGGTIEAKLKMAKDLLEKEVRIDSIFQQSETCDVCAVTKGH 229 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 GF G + R L R G P RV AG+ G + T N + Sbjct: 230 GFEGVVHRWGVACLP--RKSHRGLRKVACIGAWH-PARVMYTVARAGQNGYHHRTHLNKK 286 Query: 179 VVS------VDDK--------------------------RGLILVKGCVPGAKKNSWILV 206 + VD K I++KG V G ++ + + Sbjct: 287 IYRIGRSSSVDPKQATTTYDLTEKVITPMGGFVGYGTVRNDFIMLKGSVAGPRRR-VVTL 345 Query: 207 R 207 R Sbjct: 346 R 346 >gi|71984544|ref|NP_001021255.1| Ribosomal Protein, Large subunit family member (rpl-3) [Caenorhabditis elegans] gi|50507483|emb|CAH04729.1| C. elegans protein F13B10.2c, confirmed by transcript evidence [Caenorhabditis elegans] gi|51011806|emb|CAH10799.1| C. elegans protein F13B10.2c, confirmed by transcript evidence [Caenorhabditis elegans] Length = 353 Score = 54.8 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 63/199 (31%), Gaps = 22/199 (11%) Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQ---VVVHRTLDKNGYMAV 49 + + K GMT + + G ++ VT++ V + + Sbjct: 44 TAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALT 103 Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVF------SPSYF 103 + A + + + S + K +++ + L+ S Sbjct: 104 TIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVI 163 Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 Q++D G+T G GF G R + L R G P RV Sbjct: 164 AHTQMIDTIGVTRGHGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVAFTVAR 220 Query: 164 AGRMGGNRVTVKNLEVVSV 182 AG+ G + T+ N ++ + Sbjct: 221 AGQKGFHHRTIINNKIYRI 239 >gi|61654614|gb|AAX48833.1| L3 [Suberites domuncula] Length = 399 Score = 54.8 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 47/130 (36%), Gaps = 18/130 (13%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F +++DV G+T GKGF G R + L R G P RV + Sbjct: 210 DIFNKDEMIDVIGVTKGKGFKGVTSRWHCKKLP--RKTHKGLRKVACIGAW-HPSRVSFS 266 Query: 161 KKMAGRMGGNRVTVKNLEVVSV-DDKRGL------------ILVKGCVP--GAKKNSWIL 205 AG+ G + T N ++ + D + I G P G KN +++ Sbjct: 267 VARAGQKGYHHRTEINKKIYRIGDKEDNANAATEFDPTEKRITPVGGFPHYGTVKNDFLM 326 Query: 206 VRDSFKSAVN 215 ++ + Sbjct: 327 LKGAVVGPKR 336 >gi|73973632|ref|XP_868298.1| PREDICTED: similar to 60S ribosomal protein L3 (L4) isoform 6 [Canis familiaris] Length = 358 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 69/207 (33%), Gaps = 35/207 (16%) Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52 + + K GMT + + G ++ VT++ VV GY+ G Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIV-----GYVETPRG 98 Query: 53 --------AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP---------VG 95 A + + + + S + K +++ L Sbjct: 99 LRTFKTIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQ 158 Query: 96 SVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 + ++ + +++DV G+T GKG+ G R + L R G P Sbjct: 159 VIRVIAHTQMHEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPA 215 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV 182 RV + AG+ G + T N ++ + Sbjct: 216 RVAFSMARAGQKGYHHRTEINKKIYKI 242 >gi|806279|gb|AAA66161.1| ribosomal protein [Arabidopsis thaliana] Length = 390 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 44/132 (33%), Gaps = 6/132 (4%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + + K + + + ++ + V L F +++D Sbjct: 163 LAHTQIRKMKGVKQKKAHLNEIQINGGDIAKK--VDYACSLFEKQVPVDA-IFQKDEMID 219 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 + G+T GKG+ G + R L R G P RV AG+ G + Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYTVARAGQNGYH 276 Query: 171 RVTVKNLEVVSV 182 T N +V V Sbjct: 277 HRTEMNKKVYRV 288 >gi|157874311|ref|XP_001685639.1| ribosomal protein l3 [Leishmania major strain Friedlin] gi|157876054|ref|XP_001686391.1| ribosomal protein l3 [Leishmania major strain Friedlin] gi|157876056|ref|XP_001686392.1| ribosomal protein l3 [Leishmania major strain Friedlin] gi|157876058|ref|XP_001686393.1| ribosomal protein l3 [Leishmania major strain Friedlin] gi|157876060|ref|XP_001686394.1| ribosomal protein l3 [Leishmania major strain Friedlin] gi|66476128|gb|AAY51372.1| ribosomal protein L3 [Leishmania major] gi|68128711|emb|CAJ08844.1| putative ribosomal protein L3 [Leishmania major strain Friedlin] gi|68129465|emb|CAJ08008.1| putative ribosomal protein L3 [Leishmania major strain Friedlin] gi|68129466|emb|CAJ08009.1| putative ribosomal protein L3 [Leishmania major strain Friedlin] gi|68129467|emb|CAJ08010.1| putative ribosomal protein L3 [Leishmania major strain Friedlin] gi|68129468|emb|CAJ08011.1| putative ribosomal protein L3 [Leishmania major strain Friedlin] Length = 419 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 63/244 (25%), Gaps = 73/244 (29%) Query: 9 KLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------------- 38 K GMT + + G ++ PVT+L +V Sbjct: 50 KAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVWAHH 109 Query: 39 ------RTLDKNGYMAVQVGAGEAKVKNVSKP--------MRGFFSSVNV---------- 74 R KN + Q+ K +K + F +V Sbjct: 110 TSVEFRRRYYKNWKQSAQLAFSRQKQFANTKEGKVAEARTLNAFAKKASVIRVIAHTQLR 169 Query: 75 --------SPKKKLFEFRVQKDDDLLPVG-------SVFSPS-YFTVGQLVDVTGMTIGK 118 K + E +V + F + DV +T G Sbjct: 170 KLRNHRVGVKKAHVQEIQVNGGSVAAKIALAKSLLEKEVRVDSVFQQSEACDVCSVTKGH 229 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G G +KR L R G P RV AG+ G + T N + Sbjct: 230 GTEGVVKRWGVACLP--RKTHRGLRKVACIGAW-HPARVMYTVARAGQHGYHHRTQLNKK 286 Query: 179 VVSV 182 + + Sbjct: 287 IYQI 290 >gi|224004980|ref|XP_002296141.1| RL3, ribosomal protein 3, 60S large ribosomal subunit [Thalassiosira pseudonana CCMP1335] gi|209586173|gb|ACI64858.1| RL3, ribosomal protein 3, 60S large ribosomal subunit [Thalassiosira pseudonana CCMP1335] Length = 395 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 4/87 (4%) Query: 97 VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 + F +L+DV G+T G G+ G R L R G P Sbjct: 205 EVTVDSVFAKDELIDVLGVTKGHGYEGVTTRWGVSRLP--RKTHRGLRKVACIGSW-HPA 261 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV 182 RV AG+ G + T N ++ + Sbjct: 262 RVSDTVPRAGQNGYHHRTEMNKKIYRI 288 >gi|297837293|ref|XP_002886528.1| ARP2/RPL3B [Arabidopsis lyrata subsp. lyrata] gi|297332369|gb|EFH62787.1| ARP2/RPL3B [Arabidopsis lyrata subsp. lyrata] Length = 390 Score = 54.0 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 44/132 (33%), Gaps = 6/132 (4%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + + K + + + ++ + V L F +++D Sbjct: 163 LAHTQIRKMKGLKQKKAHLNEIQINGGDIAKK--VDYACSLFEKQVPVDA-IFQKDEMID 219 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 + G+T GKG+ G + R L R G P RV AG+ G + Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYTVARAGQNGYH 276 Query: 171 RVTVKNLEVVSV 182 T N +V V Sbjct: 277 HRTEMNKKVYRV 288 >gi|296237105|ref|XP_002763612.1| PREDICTED: 60S ribosomal protein L3-like isoform 2 [Callithrix jacchus] Length = 354 Score = 54.0 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 66/203 (32%), Gaps = 31/203 (15%) Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52 + + K GMT + + G ++ VT++ VV GY+ G Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIV-----GYVETPRG 98 Query: 53 ---AGEAKVKNVSKPMRGFFSS--VNVSPKKKLFEFRVQKDDDLLPV--------GSVFS 99 +++S + F K L E +V + V Sbjct: 99 LRTFKTVFAEHISDECKRRFYKNWHKSKKKAHLMEIQVNGGTVSEKLDWARKRLEQQVPV 158 Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159 F +++DV G++ KG+ G R + L R G P RV Sbjct: 159 NQVFGQDEMIDVIGVSKRKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAF 215 Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182 + AG+ G + T N ++ + Sbjct: 216 SVARAGQKGYHHRTEINKKIYKI 238 >gi|72387812|ref|XP_844330.1| ribosomal protein L3, mitochondrial [Trypanosoma brucei TREU927] gi|62359481|gb|AAX79918.1| ribosomal protein L3, mitochondrial, putative [Trypanosoma brucei] gi|70800863|gb|AAZ10771.1| ribosomal protein L3, mitochondrial, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] gi|261327491|emb|CBH10466.1| ribosomal protein L3, mitochondrial, putative [Trypanosoma brucei gambiense DAL972] Length = 429 Score = 54.0 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 61/246 (24%), Gaps = 73/246 (29%) Query: 6 VARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH----------------- 38 + K GMT + + G ++ PVT+L VV Sbjct: 47 MVYKAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVW 106 Query: 39 ---------RTLDKNGYMAVQVGAGEAK-----------VKNVSKPMRG----------- 67 R KN + Q+ + K K Sbjct: 107 AHHTSVEFRRRFYKNWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFEKKADIIRVVAHT 166 Query: 68 FFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP------------SYFTVGQLVDVTGMT 115 + + + + + S F + DV +T Sbjct: 167 QLRKLRNNRVGVKKAHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAVT 226 Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175 G GF+G +KR L R G P RV AG+ G + T Sbjct: 227 KGHGFTGVVKRWGVACLP--RKTHRGLRKVACIGAW-HPSRVMYTVARAGQHGYHHRTHL 283 Query: 176 NLEVVS 181 N ++ Sbjct: 284 NKKIYQ 289 >gi|297739519|emb|CBI29701.3| unnamed protein product [Vitis vinifera] Length = 389 Score = 54.0 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 42/132 (31%), Gaps = 6/132 (4%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + + K + + V+ + V F +++D Sbjct: 163 LAHTQIRKMKGLKQKKAHLMEIQVNGGDVAKK--VDYAYGFFEKQIPIDA-IFQKDEMID 219 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 + G+T GKG+ G + R L R G P RV AG+ G + Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYH 276 Query: 171 RVTVKNLEVVSV 182 T N ++ V Sbjct: 277 HRTEMNKKIYKV 288 >gi|146097010|ref|XP_001468006.1| ribosomal protein l3 [Leishmania infantum JPCM5] gi|134072372|emb|CAM71080.1| putative ribosomal protein L3 [Leishmania infantum JPCM5] Length = 419 Score = 54.0 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 63/244 (25%), Gaps = 73/244 (29%) Query: 9 KLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------------- 38 K GMT + + G ++ PVT+L +V Sbjct: 50 KAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVWAHH 109 Query: 39 ------RTLDKNGYMAVQVGAGEAKVKNVSKP--------MRGFFSSVNV---------- 74 R KN + Q+ K +K + F +V Sbjct: 110 TSVEFRRRYYKNWKQSAQLAFSRQKQFANTKEGKVAEARTLNAFAKKASVIRVIAHTQLR 169 Query: 75 --------SPKKKLFEFRVQKDDDLLPVG-------SVFSPS-YFTVGQLVDVTGMTIGK 118 K + E +V + F + DV +T G Sbjct: 170 KLRNHRVGVKKAHVQEIQVNGGSVAAKIALAKSLLEKEVRVDSVFQQSEACDVCSVTKGH 229 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G G +KR L R G P RV AG+ G + T N + Sbjct: 230 GTEGVVKRWGVACLP--RKTHRGLRKVACIGAW-HPARVMYTVARAGQHGYHHRTQLNKK 286 Query: 179 VVSV 182 + + Sbjct: 287 IYQI 290 >gi|322495094|emb|CBZ30398.1| putative ribosomal protein L3 [Leishmania mexicana MHOM/GT/2001/U1103] gi|322495095|emb|CBZ30399.1| putative ribosomal protein L3 [Leishmania mexicana MHOM/GT/2001/U1103] Length = 419 Score = 54.0 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 64/244 (26%), Gaps = 73/244 (29%) Query: 9 KLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------------- 38 K GMT + + G ++ PVT+L +V Sbjct: 50 KAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVWAHH 109 Query: 39 ------RTLDKNGYMAVQVGAGEAKVKNVSKPMR--------GFFSSVNV---------- 74 R KN + Q+ K +K R F +V Sbjct: 110 TSVEFRRRYYKNWKQSAQLAFSRQKQFANTKEGRIAEARTLNAFAKKASVIRVIAHTQLR 169 Query: 75 --------SPKKKLFEFRVQKDDDLLPVG-------SVFSPS-YFTVGQLVDVTGMTIGK 118 K + E ++ + + F + DV +T G Sbjct: 170 KLRNHRVGVKKAHVQEIQINGGNVAAKIALAKSLLEKEVRVDSVFQQSEACDVCSVTKGH 229 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G G +KR L R G P RV AG+ G + T N + Sbjct: 230 GTEGVVKRWGVACLP--RKTHRGLRKVACIGAW-HPARVMYTVARAGQHGYHHRTQLNKK 286 Query: 179 VVSV 182 + + Sbjct: 287 IYQI 290 >gi|219121047|ref|XP_002185755.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|209582604|gb|ACI65225.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 389 Score = 54.0 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 44/146 (30%), Gaps = 34/146 (23%) Query: 97 VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 + F + +DV G+T G G+ G R L R G P Sbjct: 202 EVTVDSIFAKDEQIDVLGVTRGHGYEGVTTRWGVSRLP--RKTHRGLRKVACIGSW-HPA 258 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------DDK 185 RV AG+ G T N +V V + K Sbjct: 259 RVSTTVPRAGQNGYFHRTEMNKKVYRVGKKGDEASCQTDADLTKKSITPMGGFVHYGEVK 318 Query: 186 RGLILVKGCVPGAKKNSWILVRDSFK 211 +++KG + G KK IL + K Sbjct: 319 EDWLMLKGAIVGVKKRPLILRKSLMK 344 >gi|147865994|emb|CAN83050.1| hypothetical protein VITISV_042376 [Vitis vinifera] Length = 389 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 42/132 (31%), Gaps = 6/132 (4%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + + K + + V+ + V F +++D Sbjct: 163 LAHTQIRKMKGLKQKKAHLMEIQVNGGDVAKK--VDYAYGFFEKQIPIDA-IFQKDEMID 219 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 + G+T GKG+ G + R L R G P RV AG+ G + Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYH 276 Query: 171 RVTVKNLEVVSV 182 T N ++ V Sbjct: 277 HRTEMNKKIYKV 288 >gi|116783991|gb|ABK23172.1| unknown [Picea sitchensis] Length = 389 Score = 53.6 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 43/132 (32%), Gaps = 6/132 (4%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + K K + + V+ + V + F +++D Sbjct: 163 LAHTQIKKMKGLKQNKAHLMEIQVNGGTVPQK--VDYAYNFFEKQVPIDA-LFQKDEMID 219 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 V G+T GKG+ G + R L R G P RV AG+ G + Sbjct: 220 VIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYH 276 Query: 171 RVTVKNLEVVSV 182 T N ++ + Sbjct: 277 HRTEMNKKIYKI 288 >gi|322494411|emb|CBZ29713.1| putative ribosomal protein L3 [Leishmania mexicana MHOM/GT/2001/U1103] Length = 419 Score = 53.6 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 64/244 (26%), Gaps = 73/244 (29%) Query: 9 KLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------------- 38 K GMT + + G ++ PVT+L +V Sbjct: 50 KAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVWAHH 109 Query: 39 ------RTLDKNGYMAVQVGAGEAKVKNVSKPMR--------GFFSSVNV---------- 74 R KN + Q+ K +K R F +V Sbjct: 110 TSVEFRRRYYKNWKQSAQLAFSRQKQFANTKEGRVVEARTLNAFAKKASVIRVIAHTQLR 169 Query: 75 --------SPKKKLFEFRVQKDDDLLPVG-------SVFSPS-YFTVGQLVDVTGMTIGK 118 K + E ++ + + F + DV +T G Sbjct: 170 KLRNHRVGVKKAHVQEIQINGGNVAAKIALAKSLLEKEVRVDSVFQQSEACDVCSVTKGH 229 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G G +KR L R G P RV AG+ G + T N + Sbjct: 230 GTEGVVKRWGVACLP--RKTHRGLRKVACIGAW-HPARVMYTVARAGQHGYHHRTQLNKK 286 Query: 179 VVSV 182 + + Sbjct: 287 IYQI 290 >gi|225466938|ref|XP_002262711.1| PREDICTED: hypothetical protein, partial [Vitis vinifera] Length = 299 Score = 53.6 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 42/132 (31%), Gaps = 6/132 (4%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + + K + + V+ + V F +++D Sbjct: 163 LAHTQIRKMKGLKQKKAHLMEIQVNGGDVAKK--VDYAYGFFEKQIPIDA-IFQKDEMID 219 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 + G+T GKG+ G + R L R G P RV AG+ G + Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYH 276 Query: 171 RVTVKNLEVVSV 182 T N ++ V Sbjct: 277 HRTEMNKKIYKV 288 >gi|222424540|dbj|BAH20225.1| AT1G61580 [Arabidopsis thaliana] Length = 257 Score = 53.6 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 44/132 (33%), Gaps = 6/132 (4%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + + K + + + ++ + V L F +++D Sbjct: 30 LAHTQIRKMKGLKQKKAHLNEIQINGGDIAKK--VDYACSLFEKQVPVDA-IFQKDEMID 86 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 + G+T GKG+ G + R L R G P RV AG+ G + Sbjct: 87 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYTVARAGQNGYH 143 Query: 171 RVTVKNLEVVSV 182 T N +V V Sbjct: 144 HRTEMNKKVYRV 155 >gi|116791630|gb|ABK26048.1| unknown [Picea sitchensis] gi|224285374|gb|ACN40410.1| unknown [Picea sitchensis] Length = 389 Score = 53.6 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 34/98 (34%), Gaps = 4/98 (4%) Query: 85 VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRS 144 V + F ++VD+ G+T GKG+ G + R L R Sbjct: 195 VDYAYNFFEKQVPIDA-LFQKDEMVDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRK 251 Query: 145 HGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 G P RV AG+ G + T N ++ + Sbjct: 252 VACIGAW-HPARVSFTVARAGQNGYHHRTEMNKKIYKI 288 >gi|224082478|ref|XP_002306708.1| predicted protein [Populus trichocarpa] gi|118481111|gb|ABK92509.1| unknown [Populus trichocarpa] gi|222856157|gb|EEE93704.1| predicted protein [Populus trichocarpa] Length = 389 Score = 53.6 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 42/132 (31%), Gaps = 6/132 (4%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + + K + + V+ + V F +++D Sbjct: 163 LAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQK--VDFAYGFFEKQVPIDA-VFQKDEMID 219 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 V G+T GKG+ G + R L R G P RV AG+ G + Sbjct: 220 VIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYH 276 Query: 171 RVTVKNLEVVSV 182 T N ++ V Sbjct: 277 HRTELNKKIYKV 288 >gi|320166087|gb|EFW42986.1| ribosomal protein L3 isoform b [Capsaspora owczarzaki ATCC 30864] Length = 416 Score = 53.2 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 11/102 (10%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F+ ++VDV G+T GKGF+G R L R G P V ++ Sbjct: 229 DVFSENEMVDVIGVTRGKGFTGVTYRFGTRRLP--RKSHKGLRKVACIGAW-HPANVNRS 285 Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNS 202 AG+ G + T N ++ V G GAK N+ Sbjct: 286 VARAGQKGYHHRTELNKKIYRVGA--------GASSGAKNNA 319 >gi|289616290|emb|CBI57086.1| unnamed protein product [Sordaria macrospora] Length = 392 Score = 53.2 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 41/130 (31%), Gaps = 33/130 (25%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GF+G R L R G P V Sbjct: 208 SIFEKDEVIDVIAVTKGHGFTGVTARWGTKKLP--RKTHKGLRKVACIGAW-HPSHVQWT 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 AG+ G + T N ++ + + ++ Sbjct: 265 VARAGQAGYHHRTSVNHKIYRIGKAGAEDSAATEVDVTKKKITPMGGFVRYGEINNDFVM 324 Query: 191 VKGCVPGAKK 200 VKG VPG KK Sbjct: 325 VKGSVPGVKK 334 >gi|301093682|ref|XP_002997686.1| 60S ribosomal protein L3 [Phytophthora infestans T30-4] gi|262109935|gb|EEY67987.1| 60S ribosomal protein L3 [Phytophthora infestans T30-4] Length = 389 Score = 53.2 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 46/149 (30%), Gaps = 34/149 (22%) Query: 85 VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRS 144 V L + F +++DV G+T G G G + R L R Sbjct: 192 VDFAKSLFEKQVPVTA-VFAKDEMIDVIGVTKGHGVEGVITRWGVTRLP--RKTHRGLRK 248 Query: 145 HGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------DDKRGL------- 188 G P RV AG+ G + T N ++ V ++ L Sbjct: 249 VACIGAW-HPSRVRFTVPRAGQHGYHHRTEINKKIYRVGAAGDKKSCMTEQDLTEKDITP 307 Query: 189 --------------ILVKGCVPGAKKNSW 203 +++KG + G KK + Sbjct: 308 LGGFPHYGVINEDWLMIKGAIVGTKKRAL 336 >gi|146097013|ref|XP_001468007.1| ribosomal protein l3 [Leishmania infantum JPCM5] gi|146099403|ref|XP_001468635.1| ribosomal protein l3 [Leishmania infantum] gi|134072373|emb|CAM71081.1| putative ribosomal protein L3 [Leishmania infantum JPCM5] gi|134073003|emb|CAM71722.1| putative ribosomal protein L3 [Leishmania infantum JPCM5] Length = 419 Score = 53.2 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 40/244 (16%), Positives = 64/244 (26%), Gaps = 73/244 (29%) Query: 9 KLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------------- 38 K GMT + + G ++ PVT+L +V Sbjct: 50 KAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVWAHH 109 Query: 39 ------RTLDKNGYMAVQVGAGEAKVKNVSKP--------MRGFFSSVNV---------- 74 R KN + Q+ K +K + F +V Sbjct: 110 TSVEFRRRYYKNWKQSAQLAFSRQKQFANTKEGKVAEARTLNAFAKKASVIRVIAHTQLR 169 Query: 75 --------SPKKKLFEFRVQKDDDLLPVG-------SVFSPS-YFTVGQLVDVTGMTIGK 118 K + E ++ + + F + DV +T G Sbjct: 170 KLRNHRVGVKKAHVQEIQINGGNVAAKIALAKSLLEKEVRVDSVFQQSEACDVCSVTKGH 229 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G G +KR L R G P RV AG+ G + T N + Sbjct: 230 GTEGVVKRWGVACLP--RKTHRGLRKVACIGAW-HPARVMYTVARAGQHGYHHRTQLNKK 286 Query: 179 VVSV 182 + + Sbjct: 287 IYQI 290 >gi|316971123|gb|EFV54952.1| 60S ribosomal protein L3 [Trichinella spiralis] Length = 405 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 42/247 (17%), Positives = 67/247 (27%), Gaps = 73/247 (29%) Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGY------ 46 + + K GMT + + G +I VTVL +V + GY Sbjct: 60 TAFIGYKAGMTHIVREVDKPGSKINKKDVVEAVTVLETPPMVIVGKCVV---GYIETPQG 116 Query: 47 -------MAVQVGAGEAKVKN-----VSKPMRGFFSSVNV-------------------- 74 A + + +K + + V Sbjct: 117 LRAFKTIWAEHLSDDCKRRYKCERKAFTKASKKWQDEAGVKEIQTDFARMIKYCKVIRVI 176 Query: 75 -----------SPKKKLFEFRVQKDDDLLPV--------GSVFSPSYFTVGQLVDVTGMT 115 K + E ++ V V S F +++D G+T Sbjct: 177 AHTQMKLLHHGQKKAHIMEIQLNGGTIEEKVNWAREHLEKQVPVDSVFARDEMIDCIGVT 236 Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175 GKGF G R + L R G P RV AG+ G + T Sbjct: 237 KGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVRYTVARAGQKGYHHRTEI 293 Query: 176 NLEVVSV 182 N ++ + Sbjct: 294 NKKIYRI 300 >gi|115487526|ref|NP_001066250.1| Os12g0167900 [Oryza sativa Japonica Group] gi|548770|sp|P35684|RL3_ORYSJ RecName: Full=60S ribosomal protein L3 gi|303853|dbj|BAA02155.1| ribosomal protein L3 [Oryza sativa Japonica Group] gi|77553113|gb|ABA95909.1| 60S ribosomal protein L3, putative, expressed [Oryza sativa Japonica Group] gi|113648757|dbj|BAF29269.1| Os12g0167900 [Oryza sativa Japonica Group] gi|125578626|gb|EAZ19772.1| hypothetical protein OsJ_35352 [Oryza sativa Japonica Group] gi|146141390|tpg|DAA01059.1| TPA_inf: ribosomal protein L3A [Oryza sativa (japonica cultivar-group)] gi|146141404|tpg|DAA01151.1| TPA_inf: ribosomal protein L3A [Oryza sativa (japonica cultivar-group)] gi|215686363|dbj|BAG87624.1| unnamed protein product [Oryza sativa Japonica Group] Length = 389 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 4/87 (4%) Query: 97 VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 F +++D+ G+T GKG+ G + R L R G P Sbjct: 205 EIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPA 261 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV 182 RV AG+ G + T N +V + Sbjct: 262 RVSYTVARAGQNGYHHRTEMNKKVYKI 288 >gi|94468802|gb|ABF18250.1| ribosomal protein L3 [Aedes aegypti] Length = 415 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 3/83 (3%) Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159 F +++D +T GKGF G R + L R G P RV Sbjct: 208 ADVFRQDEMIDCVAVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVAF 264 Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 265 TVARAGQKGYHHRTEINKKIYRI 287 >gi|6688812|emb|CAB65281.1| L3 Ribosomal protein [Medicago sativa subsp. x varia] Length = 388 Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 42/131 (32%), Gaps = 6/131 (4%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + + K + + V+ + V + F +++D Sbjct: 163 LAHTQIRKMKGLKQKKAHIMEIQVNGGTIAQK--VDFAYNFFEKQVPIDA-VFQKDEMID 219 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 + G+T GKG+ G + R L R G P RV AG+ G + Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYH 276 Query: 171 RVTVKNLEVVS 181 T N ++ Sbjct: 277 HRTELNKKIYK 287 >gi|78190797|gb|ABB29720.1| ribosomal protein 3 large subunit [Monosiga brevicollis] Length = 332 Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 28/82 (34%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F+ + +D+ G+T G GF G R L R G + Sbjct: 160 DVFSQNEHIDIIGVTKGHGFEGVTHRWGTKKLP--RKTHKGLRKVACIGAWHPANVTYA- 216 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 217 VPRAGQRGYHHRTEMNKKIYRI 238 >gi|323455903|gb|EGB11771.1| hypothetical protein AURANDRAFT_36266 [Aureococcus anophagefferens] Length = 393 Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 59/300 (19%), Positives = 87/300 (29%), Gaps = 102/300 (34%) Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVV---------------- 36 + +A K GMT V + G ++ VTVL VV Sbjct: 44 TAFMAYKAGMTHVVRDVDRPGSKVHKKEIVEAVTVLEAPPMVVVGLVGYVETPRGLRSLA 103 Query: 37 ----------VHRTLDKNGYM---------AVQVGA---GEAKVKNVSKPMRGFFSSVNV 74 V R KN Y A + A GE V + ++ + S V V Sbjct: 104 TVWAAFLSEEVKRRFYKNWYKSKRKAMTKYAAKYSASDGGEKDVDRELERIKKYCSVVRV 163 Query: 75 SP------------KKKLFEFRVQKDDDL-----LPVG---SVFSPS-YFTVGQLVDVTG 113 K + E +V D+ G F +++DV G Sbjct: 164 IAHTQVKKLKLRQKKAHVMEIQVNGGADVAAKVDYAKGLFEQEVPVDTVFNANEMIDVLG 223 Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173 T G G G + R L R G P RV +G+ G + T Sbjct: 224 ATRGHGTEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPSRVSFTVARSGQNGYHHRT 280 Query: 174 VKNLEVVSVD--------------DKRGL----------------ILVKGCVPGAKKNSW 203 N ++ + ++ + I+VKGCV G+KK Sbjct: 281 EMNKKIYRIGKSGDAKSASTEADLTEKSITPMGGFPHYGEVNEDWIMVKGCVVGSKKRCL 340 >gi|110740330|dbj|BAF02060.1| hypothetical protein [Arabidopsis thaliana] Length = 555 Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 56/191 (29%), Gaps = 38/191 (19%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + + K + + ++ + V F +++D Sbjct: 329 LAHTQIRKMKGLKQKKAHMMEIQINGGTIAQK--VDFAYSFFEKQIPIEA-VFQKDEMID 385 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 + G+T GKG+ G + R L R G P RV AG+ G + Sbjct: 386 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYTVARAGQNGYH 442 Query: 171 RVTVKNLEVVSV-------------------------------DDKRGLILVKGCVPGAK 199 T N ++ + K +++KGC G K Sbjct: 443 HRTELNKKIYRLGKVGTEAHTAMTEYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPK 502 Query: 200 KNSWILVRDSF 210 K + +R S Sbjct: 503 KR-VVTLRQSL 512 >gi|167535326|ref|XP_001749337.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772203|gb|EDQ85858.1| predicted protein [Monosiga brevicollis MX1] Length = 419 Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 28/82 (34%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F+ + +D+ G+T G GF G R L R G + Sbjct: 228 DVFSQNEHIDIIGVTKGHGFEGVTHRWGTKKLP--RKTHKGLRKVACIGAWHPANVTYA- 284 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 285 VPRAGQRGYHHRTEMNKKIYRI 306 >gi|170041842|ref|XP_001848658.1| 60S ribosomal protein L3 [Culex quinquefasciatus] gi|167865417|gb|EDS28800.1| 60S ribosomal protein L3 [Culex quinquefasciatus] Length = 452 Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 30/83 (36%), Gaps = 3/83 (3%) Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159 F ++VD +T GKGF G R + L R G P RV Sbjct: 245 ADVFGQDEMVDCVAVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVAF 301 Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 302 TVARAGQKGYHHRTEINKKIYRI 324 >gi|115484365|ref|NP_001065844.1| Os11g0168200 [Oryza sativa Japonica Group] gi|62701923|gb|AAX92996.1| ribosomal protein L3, putative [Oryza sativa Japonica Group] gi|62734368|gb|AAX96477.1| ribosomal protein L3, putative [Oryza sativa Japonica Group] gi|77548788|gb|ABA91585.1| 60S ribosomal protein L3, putative, expressed [Oryza sativa Japonica Group] gi|113644548|dbj|BAF27689.1| Os11g0168200 [Oryza sativa Japonica Group] gi|125533541|gb|EAY80089.1| hypothetical protein OsI_35258 [Oryza sativa Indica Group] gi|125576343|gb|EAZ17565.1| hypothetical protein OsJ_33102 [Oryza sativa Japonica Group] gi|146141406|tpg|DAA01152.1| TPA_inf: ribosomal protein L3B [Oryza sativa (japonica cultivar-group)] gi|146141408|tpg|DAA01150.1| TPA_inf: ribosomal protein L3B [Oryza sativa] gi|215706975|dbj|BAG93435.1| unnamed protein product [Oryza sativa Japonica Group] gi|215715327|dbj|BAG95078.1| unnamed protein product [Oryza sativa Japonica Group] Length = 389 Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 4/87 (4%) Query: 97 VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 F +++D+ G+T GKG+ G + R L R G P Sbjct: 205 EIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPA 261 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV 182 RV AG+ G + T N +V + Sbjct: 262 RVSYTVARAGQNGYHHRTEMNKKVYKI 288 >gi|145497857|ref|XP_001434917.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124402045|emb|CAK67520.1| unnamed protein product [Paramecium tetraurelia] Length = 341 Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 49/153 (32%), Gaps = 35/153 (22%) Query: 97 VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 F + +DV G+T GKG +G +KR R G G P Sbjct: 149 EVKVDQVFKQNEQIDVLGVTKGKGVAGVIKRFGVK--HLQKKTHRGWRRVGCIGGW-HPA 205 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSVDD------------------------------K 185 V + G++G + T N ++ + + Sbjct: 206 NVRYSVARTGQLGYHHRTEMNKKIYRIGAAGDKNTASTEADLTSKAITPLGGFPHYGEIR 265 Query: 186 RGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +++KG + G KK +L+R S + K Sbjct: 266 NDFLMLKGGIVGPKKR-VVLLRKSLVPQTSRKA 297 >gi|145475213|ref|XP_001423629.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|145532966|ref|XP_001452233.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124390690|emb|CAK56231.1| unnamed protein product [Paramecium tetraurelia] gi|124419921|emb|CAK84836.1| unnamed protein product [Paramecium tetraurelia] Length = 393 Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 49/153 (32%), Gaps = 35/153 (22%) Query: 97 VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 F + +DV G+T GKG +G +KR R G G P Sbjct: 201 EVKVDQVFKQNEQIDVLGVTKGKGVAGVIKRFGVK--HLQKKTHRGWRRVGCIGGW-HPA 257 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSVDD------------------------------K 185 V + G++G + T N ++ + + Sbjct: 258 NVRYSVARTGQLGYHHRTEMNKKIYRIGAAGDKNTASTEADLTSKAITPLGGFPHYGEIR 317 Query: 186 RGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +++KG + G KK +L+R S + K Sbjct: 318 NDFLMLKGGIVGPKKR-VVLLRKSLVPQTSRKA 349 >gi|145527660|ref|XP_001449630.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124417218|emb|CAK82233.1| unnamed protein product [Paramecium tetraurelia] Length = 393 Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 49/153 (32%), Gaps = 35/153 (22%) Query: 97 VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 F + +DV G+T GKG +G +KR R G G P Sbjct: 201 EVKVDQVFNQNEQIDVLGVTKGKGVAGVIKRFGVK--HLQKKTHRGWRRVGCIGGW-HPA 257 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSVDD------------------------------K 185 V + G++G + T N ++ + + Sbjct: 258 NVRYSVARTGQLGYHHRTEMNKKIYRIGAAGDKNTASTEADLTSKAITPLGGFPHYGEIR 317 Query: 186 RGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218 +++KG + G KK +L+R S + K Sbjct: 318 NDFLMLKGGIVGPKKR-VVLLRKSLVPQTSRKA 349 >gi|255570998|ref|XP_002526450.1| 60S ribosomal protein L3, putative [Ricinus communis] gi|223534230|gb|EEF35945.1| 60S ribosomal protein L3, putative [Ricinus communis] Length = 389 Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 41/131 (31%), Gaps = 6/131 (4%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + + K + + V+ + V F +++D Sbjct: 163 LAHTQIRKMKGLKQKKAHLMEIQVNGGDVAQK--VDFAYSFFEKQVPIDA-VFQKDEMID 219 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 + G+T GKG+ G + R L R G P RV AG+ G + Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYH 276 Query: 171 RVTVKNLEVVS 181 T N ++ Sbjct: 277 HRTEMNKKIYK 287 >gi|241859209|ref|XP_002416193.1| ribosomal protein L3, putative [Ixodes scapularis] gi|215510407|gb|EEC19860.1| ribosomal protein L3, putative [Ixodes scapularis] Length = 390 Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 42/247 (17%), Positives = 76/247 (30%), Gaps = 70/247 (28%) Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVV--------------- 37 + + K GMT + + G ++ PVT+L + +V Sbjct: 31 TAFLGFKAGMTHIVREVDKPGSKVNKKEVVEPVTILEVPPMMIVGLVGYIETPKGLRAFK 90 Query: 38 -----------HRTLDKNGYMAVQVGA-----------GEAKVKNVSKPMRGFFSSVNVS 75 R KN Y + + G+ +++ K M+ + + V Sbjct: 91 TVWAEHLSEECRRRFYKNWYKSKKKAFTKSSKKWQEDLGKQEIERDLKKMKKYCKVIRVL 150 Query: 76 PKKKLF--------EFRVQKDDDLLPVGSVFS------------PSYFTVGQLVDVTGMT 115 ++ ++ + VG+ F +++DV G+T Sbjct: 151 AHTQMKLMRRRQKKAHIMEIQVNGGSVGAKIKWAREHLEKPVTVSQVFAQDEMIDVIGVT 210 Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175 GKGF G R + L R G P RV AG+ G + T Sbjct: 211 KGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFTVARAGQKGYHHRTEI 267 Query: 176 NLEVVSV 182 N ++ + Sbjct: 268 NKKIYRI 274 >gi|242077200|ref|XP_002448536.1| hypothetical protein SORBIDRAFT_06g028650 [Sorghum bicolor] gi|241939719|gb|EES12864.1| hypothetical protein SORBIDRAFT_06g028650 [Sorghum bicolor] Length = 389 Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++D+ G+T GKG+ G + R L R G P RV Sbjct: 210 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYT 266 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N +V + Sbjct: 267 VARAGQNGYHHRTEMNKKVYKI 288 >gi|242017396|ref|XP_002429175.1| 60S ribosomal protein L3, putative [Pediculus humanus corporis] gi|212514053|gb|EEB16437.1| 60S ribosomal protein L3, putative [Pediculus humanus corporis] Length = 407 Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++D G+T GKG+ G R + L R G P RV Sbjct: 210 VFAPDEMIDCIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFTV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEMNKKIYRI 287 >gi|37909690|gb|AAP23996.1| ribosomal protein L3B [Oryza sativa Indica Group] Length = 345 Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 4/87 (4%) Query: 97 VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 F +++D+ G+T GKG+ G + R L R G P Sbjct: 194 EIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPA 250 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV 182 RV AG+ G + T N +V + Sbjct: 251 RVSYTVARAGQNGYHHRTEMNKKVYKI 277 >gi|255642195|gb|ACU21362.1| unknown [Glycine max] Length = 389 Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 42/131 (32%), Gaps = 6/131 (4%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + + K + + V+ + V L F +++D Sbjct: 163 LAHTQIRKMKGLKQKKAHIMEIQVNGGTIAQK--VDFAYSFLEKQVPIDA-VFQKDEMID 219 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 + G+T GKG+ G + R L R G P RV AG+ G + Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYH 276 Query: 171 RVTVKNLEVVS 181 T N +V Sbjct: 277 HRTELNKKVYK 287 >gi|312088746|ref|XP_003145979.1| 60S ribosomal protein L3 [Loa loa] gi|307758859|gb|EFO18093.1| 60S ribosomal protein L3 [Loa loa] Length = 386 Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 38/237 (16%), Positives = 67/237 (28%), Gaps = 60/237 (25%) Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVV-------------VHR 39 + + K GMT + + G ++ VTVL +V + Sbjct: 44 TAFMGFKAGMTHIVREVDKPGSKVNKKEVVEAVTVLETPPMIIVGVVGYIDTPRGPRQFK 103 Query: 40 TL---------------------------------DKNGYMAVQVGAGEAKVKNVSKPMR 66 T+ D++G ++Q + K + Sbjct: 104 TVWAEHLSEDCRRRFYKNWNSSKKKAFQKHAKKWQDEDGMKSIQADLAKMKKYCSIIRVI 163 Query: 67 GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMK 125 + + + + D F +++DV G+T GKGF G Sbjct: 164 AHTQAHIMEIQVNGGTIPEKVDWAYEHFEKQVPVDSIFAQDEMIDVIGVTKGKGFKGVTS 223 Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 R + L R G P RV AG+ G + T N ++ + Sbjct: 224 RWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFTVARAGQKGYHHRTEVNKKIYRI 277 >gi|167377647|ref|XP_001734483.1| 60S ribosomal protein L3 [Entamoeba dispar SAW760] gi|165904006|gb|EDR29379.1| 60S ribosomal protein L3, putative [Entamoeba dispar SAW760] Length = 381 Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 48/125 (38%), Gaps = 19/125 (15%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F + +DV +T G G++G +KR L R G P RV Sbjct: 188 SVFGTDECIDVCSVTKGHGYNGVIKRFGVRHLP--RKTHRGLRKVACVGAW-HPARVSWT 244 Query: 161 KKMAGRMGGNRVTVKNLEVVSV-------------DDKRGLILVKGCVP--GAKKNSWIL 205 AG+MG + T N ++ + ++G I G P G KN +++ Sbjct: 245 VARAGQMGFFKRTEVNKKIYRLGCGDLKNAKTEFDITEKG-ITPMGGFPHYGVVKNDFLM 303 Query: 206 VRDSF 210 ++ + Sbjct: 304 IKGTV 308 >gi|67472477|ref|XP_652042.1| 60S ribosomal protein L3 [Entamoeba histolytica HM-1:IMSS] gi|67473369|ref|XP_652451.1| 60S ribosomal protein L3 [Entamoeba histolytica HM-1:IMSS] gi|67475438|ref|XP_653413.1| 60S ribosomal protein L3 [Entamoeba histolytica HM-1:IMSS] gi|167386238|ref|XP_001737679.1| 60S ribosomal protein L3 [Entamoeba dispar SAW760] gi|167388407|ref|XP_001738553.1| 60S ribosomal protein L3 [Entamoeba dispar SAW760] gi|56468865|gb|EAL46673.1| 60S ribosomal protein L3, putative [Entamoeba histolytica HM-1:IMSS] gi|56469305|gb|EAL47065.1| 60S ribosomal protein L3, putative [Entamoeba histolytica HM-1:IMSS] gi|56470361|gb|EAL48027.1| 60S ribosomal protein L3, putative [Entamoeba histolytica HM-1:IMSS] gi|165898153|gb|EDR25097.1| 60S ribosomal protein L3, putative [Entamoeba dispar SAW760] gi|165899449|gb|EDR26038.1| 60S ribosomal protein L3, putative [Entamoeba dispar SAW760] Length = 402 Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 48/125 (38%), Gaps = 19/125 (15%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F + +DV +T G G++G +KR L R G P RV Sbjct: 209 SVFGTDECIDVCSVTKGHGYNGVIKRFGVRHLP--RKTHRGLRKVACVGAW-HPARVSWT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV-------------DDKRGLILVKGCVP--GAKKNSWIL 205 AG+MG + T N ++ + ++G I G P G KN +++ Sbjct: 266 VARAGQMGFFKRTEVNKKIYRLGCGDLKNAKTEFDITEKG-ITPMGGFPHYGVVKNDFLM 324 Query: 206 VRDSF 210 ++ + Sbjct: 325 IKGTV 329 >gi|296081197|emb|CBI18223.3| unnamed protein product [Vitis vinifera] Length = 449 Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 56/180 (31%), Gaps = 24/180 (13%) Query: 46 YMAVQ--VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103 Y +V + + + K + + V+ + V F Sbjct: 216 YASVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQK--VDYAYGFFEKQVPVDA-IF 272 Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 +++D+ G+T GKG+ G + R L R G P RV Sbjct: 273 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVAR 329 Query: 164 AGRMGGNRVTVKNLEVVS--------------VDDKRGLILVKGCVP--GAKKNSWILVR 207 AG+ G + T N ++ D I G P G K+ +++++ Sbjct: 330 AGQNGYHHRTEMNKKIYKLGKIEQESHTALTEFDRTEKDITPMGGFPHYGVVKDDYVMIK 389 >gi|34105772|gb|AAQ62077.1| ribosomal protein L3 [Triticum aestivum] Length = 384 Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 34/98 (34%), Gaps = 4/98 (4%) Query: 85 VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRS 144 V + F +++D+ G+T GKG+ G + R L R Sbjct: 190 VDYGYNFFEKEVPIDA-VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRK 246 Query: 145 HGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 G P RV AG+ G + T N +V + Sbjct: 247 VACIGAW-HPARVSYTVARAGQNGYHHRTEMNKKVYKI 283 >gi|325184995|emb|CCA19486.1| 60S ribosomal protein L3 putative [Albugo laibachii Nc14] Length = 388 Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 45/146 (30%), Gaps = 34/146 (23%) Query: 85 VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRS 144 V L S FT +L+D+ G T G G G + R L R Sbjct: 191 VDFAKSLFEKQVPVSA-VFTQDELIDICGATKGHGIEGVVTRWGVTRLP--RKTHRGLRK 247 Query: 145 HGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD---------DKRGL------- 188 G P RV AG+ G + T N ++ + ++ L Sbjct: 248 VACIGAW-HPSRVSYTVPRAGQHGYHHRTEINKKIYRIGAAGDAKSCQTEQDLTEKSITP 306 Query: 189 --------------ILVKGCVPGAKK 200 +++KG V G KK Sbjct: 307 MGGFPHYGIINEDWLMIKGAVVGVKK 332 >gi|312283375|dbj|BAJ34553.1| unnamed protein product [Thellungiella halophila] Length = 389 Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 6/145 (4%) Query: 37 VHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGS 96 + K G + + + + K + + ++ + V Sbjct: 149 QLEKMKKYGTVIRVLAHTQIRKMKGLKQKKAHMMEIQINGGTIAQK--VDFAYSFFEKQI 206 Query: 97 VFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGR 156 S F +++DV G+T GKG+ G + R L R G P R Sbjct: 207 PID-SVFQKDEMIDVIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPAR 262 Query: 157 VFKNKKMAGRMGGNRVTVKNLEVVS 181 V AG+ G + T N ++ Sbjct: 263 VSYTVARAGQNGYHHRTELNKKIYR 287 >gi|224120106|ref|XP_002331138.1| predicted protein [Populus trichocarpa] gi|222872866|gb|EEF09997.1| predicted protein [Populus trichocarpa] Length = 389 Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 40/127 (31%), Gaps = 6/127 (4%) Query: 55 EAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGM 114 + + K + + V+ + V F +++D+ G+ Sbjct: 167 QIRKMKGLKQKKAHLMEIQVNGGDVAKK--VDFAYSFFEKQIPIDA-IFQKDEMIDIIGV 223 Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 T GKG+ G + R L R G P RV AG+ G + T Sbjct: 224 TKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYHHRTE 280 Query: 175 KNLEVVS 181 N ++ Sbjct: 281 LNKKIYK 287 >gi|260946767|ref|XP_002617681.1| 60S ribosomal protein L3 [Clavispora lusitaniae ATCC 42720] gi|238849535|gb|EEQ38999.1| 60S ribosomal protein L3 [Clavispora lusitaniae ATCC 42720] Length = 388 Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 43/140 (30%), Gaps = 34/140 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G GF G R L R G P V Sbjct: 207 SVFEKDEMIDVVAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGAW-HPANVNWT 263 Query: 161 KKMAGRMGGNRVTVKNLEVVSVD------------------------------DKRGLIL 190 AG+ G + T N +V V +L Sbjct: 264 VARAGQNGYHHRTSINHKVYRVGSGADEANGATEFDRTKKTINPLGGFVRYGLVNNDFVL 323 Query: 191 VKGCVPGAKKNSWILVRDSF 210 +KG +PG KK + +R S Sbjct: 324 LKGSIPGIKKR-VVTLRKSL 342 >gi|326497903|dbj|BAJ94814.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 389 Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++D+ G+T GKG+ G + R L R G P RV Sbjct: 210 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYT 266 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N +V + Sbjct: 267 VARAGQNGYHHRTEMNKKVYKI 288 >gi|293335791|ref|NP_001168481.1| hypothetical protein LOC100382258 [Zea mays] gi|223948579|gb|ACN28373.1| unknown [Zea mays] Length = 253 Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 4/88 (4%) Query: 96 SVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP 154 F +++D+ G+T GKG+ G + R L R G P Sbjct: 68 EEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HP 124 Query: 155 GRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 RV AG+ G + T N +V + Sbjct: 125 ARVSYTVARAGQNGYHHRTEMNKKVYKI 152 >gi|118152402|gb|ABK63945.1| ribosomal protein L3-B2 [Triticum aestivum] gi|118152404|gb|ABK63946.1| ribosomal protein L3-B2 [Triticum aestivum] gi|146141394|tpg|DAA01145.1| TPA_inf: ribosomal protein L3B-2 [Triticum aestivum] Length = 389 Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 33/98 (33%), Gaps = 4/98 (4%) Query: 85 VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRS 144 V F +++D+ G+T GKG+ G + R L R Sbjct: 195 VDYGYSFFEKEVPIDA-VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRK 251 Query: 145 HGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 G P RV AG+ G + T N +V + Sbjct: 252 VACIGAW-HPARVSYTVARAGQNGYHHRTEMNKKVYKI 288 >gi|183235559|ref|XP_001914254.1| 60S ribosomal protein L3 [Entamoeba histolytica HM-1:IMSS] gi|169800490|gb|EDS88972.1| 60S ribosomal protein L3, putative [Entamoeba histolytica HM-1:IMSS] Length = 350 Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 48/125 (38%), Gaps = 19/125 (15%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F + +DV +T G G++G +KR L R G P RV Sbjct: 157 SVFGTDECIDVCSVTKGHGYNGVIKRFGVRHLP--RKTHRGLRKVACVGAW-HPARVSWT 213 Query: 161 KKMAGRMGGNRVTVKNLEVVSV-------------DDKRGLILVKGCVP--GAKKNSWIL 205 AG+MG + T N ++ + ++G I G P G KN +++ Sbjct: 214 VARAGQMGFFKRTEVNKKIYRLGCGDLKNAKTEFDITEKG-ITPMGGFPHYGVVKNDFLM 272 Query: 206 VRDSF 210 ++ + Sbjct: 273 IKGTV 277 >gi|34105768|gb|AAQ62075.1| ribosomal protein L3 [Triticum aestivum] gi|34105770|gb|AAQ62076.1| ribosomal protein L3 [Triticum aestivum] gi|34105774|gb|AAQ62078.1| ribosomal protein L3 [Triticum aestivum] gi|118152389|gb|ABK63938.1| ribosomal protein L3-B3 [Triticum aestivum] gi|118152400|gb|ABK63944.1| ribosomal protein L3-B1 [Triticum aestivum] gi|146141392|tpg|DAA01144.1| TPA_inf: ribosomal protein L3B-3 [Triticum aestivum] gi|146141396|tpg|DAA01146.1| TPA_inf: ribosomal protein L3B-1 [Triticum aestivum] Length = 389 Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 34/98 (34%), Gaps = 4/98 (4%) Query: 85 VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRS 144 V + F +++D+ G+T GKG+ G + R L R Sbjct: 195 VDYGYNFFEKEVPIDA-VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRK 251 Query: 145 HGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 G P RV AG+ G + T N +V + Sbjct: 252 VACIGAW-HPARVSYTVARAGQNGYHHRTEMNKKVYKI 288 >gi|307107912|gb|EFN56153.1| hypothetical protein CHLNCDRAFT_35097 [Chlorella variabilis] Length = 386 Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 41/124 (33%), Gaps = 19/124 (15%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F ++VD +T G G G + R L R G P RV Sbjct: 208 VFNQSEMVDAIAITKGHGTEGVVTRWGVSRLP--RKTHRGLRKVACIGAW-HPARVGWTV 264 Query: 162 KMAGRMGGNRVTVKNLEVVSVD----------DKRGL----ILVKGCVP--GAKKNSWIL 205 +G MG N T N +V + + + I G P G K +++ Sbjct: 265 ARSGAMGFNHRTEMNKKVYRIGVKGEESHAATTEHDVTVKDITPMGGFPHYGVVKEDYVM 324 Query: 206 VRDS 209 ++ + Sbjct: 325 IKGA 328 >gi|194693910|gb|ACF81039.1| unknown [Zea mays] gi|194702010|gb|ACF85089.1| unknown [Zea mays] gi|195606812|gb|ACG25236.1| 60S ribosomal protein L3 [Zea mays] gi|195619674|gb|ACG31667.1| 60S ribosomal protein L3 [Zea mays] gi|195626206|gb|ACG34933.1| 60S ribosomal protein L3 [Zea mays] gi|195641988|gb|ACG40462.1| 60S ribosomal protein L3 [Zea mays] Length = 389 Score = 52.5 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++D+ G+T GKG+ G + R L R G P RV Sbjct: 210 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYT 266 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N +V + Sbjct: 267 VARAGQNGYHHRTEMNKKVYKI 288 >gi|212721340|ref|NP_001131208.1| hypothetical protein LOC100192516 [Zea mays] gi|194690876|gb|ACF79522.1| unknown [Zea mays] Length = 389 Score = 52.1 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++D+ G+T GKG+ G + R L R G P RV Sbjct: 210 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYT 266 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N +V + Sbjct: 267 VARAGQNGYHHRTEMNKKVYKI 288 >gi|225465175|ref|XP_002263053.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 219 Score = 52.1 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 39/120 (32%), Gaps = 6/120 (5%) Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122 K + + V+ + V F +++D+ G+T GKG+ G Sbjct: 5 KQKKAHLMEIQVNGGDVAKK--VDYAYGFFEKQIPIDA-IFQKDEMIDIIGVTKGKGYEG 61 Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 + R L R G P RV AG+ G + T N ++ V Sbjct: 62 VVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYHHRTEMNKKIYKV 118 >gi|255566636|ref|XP_002524302.1| 60S ribosomal protein L3, putative [Ricinus communis] gi|223536393|gb|EEF38042.1| 60S ribosomal protein L3, putative [Ricinus communis] Length = 389 Score = 52.1 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 41/131 (31%), Gaps = 6/131 (4%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + + K + + V+ + V F +++D Sbjct: 163 LAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQK--VDFAYGFFEKQVPIDA-VFQKDEMID 219 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 + G+T GKG+ G + R L R G P RV AG+ G + Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYH 276 Query: 171 RVTVKNLEVVS 181 T N ++ Sbjct: 277 HRTEMNKKIYK 287 >gi|326495464|dbj|BAJ85828.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 213 Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 34/98 (34%), Gaps = 4/98 (4%) Query: 85 VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRS 144 V + F +++D+ G+T GKG+ G + R L R Sbjct: 19 VDYGYNFFEKEVPIDA-VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRK 75 Query: 145 HGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 G P RV AG+ G + T N +V + Sbjct: 76 VACIGAW-HPARVSYTVARAGQNGYHHRTEMNKKVYKI 112 >gi|224066623|ref|XP_002302168.1| predicted protein [Populus trichocarpa] gi|118483469|gb|ABK93633.1| unknown [Populus trichocarpa] gi|222843894|gb|EEE81441.1| predicted protein [Populus trichocarpa] Length = 389 Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 41/131 (31%), Gaps = 6/131 (4%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + + K + + V+ + V F +++D Sbjct: 163 LAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQK--VDFAYGFFEKQVPIDA-VFQKDEMID 219 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 + G+T GKG+ G + R L R G P RV AG+ G + Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYH 276 Query: 171 RVTVKNLEVVS 181 T N ++ Sbjct: 277 HRTELNKKIYK 287 >gi|71019525|ref|XP_759993.1| hypothetical protein UM03846.1 [Ustilago maydis 521] gi|46099519|gb|EAK84752.1| hypothetical protein UM03846.1 [Ustilago maydis 521] Length = 474 Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 41/124 (33%), Gaps = 18/124 (14%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV +T G G+ G R L R G +F Sbjct: 291 SVFEQNEIIDVIAVTKGHGYEGVTARWGTKKLP--RKTHRGLRKIACIGAWHPANVMFT- 347 Query: 161 KKMAGRMGGNRVTVKNLEVVSV-------------DDKRGLILVKGCVP--GAKKNSWIL 205 +G+ G + T ++ + D I G P G KN +++ Sbjct: 348 VARSGQDGYHHRTEIGKKIYRISNGEDKTSGSTDFDTTEKAITPLGGFPHYGLVKNDFVM 407 Query: 206 VRDS 209 ++ S Sbjct: 408 IKGS 411 >gi|37625025|gb|AAQ96336.1| ribosomal protein L3B [Nicotiana tabacum] Length = 409 Score = 51.7 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 41/131 (31%), Gaps = 6/131 (4%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + + K + + V+ + V F +++D Sbjct: 183 LAHTQIRKMKGLKQKKAHLMEIQVNGGDVSQK--VDYAYGFFEKQIPVDA-IFQKDEMID 239 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 + G+T GKG+ G + R L R G P RV AG+ G + Sbjct: 240 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYTVARAGQNGYH 296 Query: 171 RVTVKNLEVVS 181 T N +V Sbjct: 297 HRTELNKKVYR 307 >gi|37625023|gb|AAQ96335.1| ribosomal protein L3A [Nicotiana tabacum] Length = 389 Score = 51.7 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 41/131 (31%), Gaps = 6/131 (4%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + + K + + V+ + V F +++D Sbjct: 163 LAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQK--VDFAYGFFEKQVPVDA-VFQKDEMID 219 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 + G+T GKG+ G + R L R G P RV AG+ G + Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYTVARAGQNGYH 276 Query: 171 RVTVKNLEVVS 181 T N +V Sbjct: 277 HRTEMNKKVYK 287 >gi|225460636|ref|XP_002265125.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 397 Score = 51.7 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 44/138 (31%), Gaps = 8/138 (5%) Query: 46 YMAVQ--VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103 Y +V + + + K + + V+ + V F Sbjct: 164 YASVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQK--VDYAYGFFEKQVPVDA-IF 220 Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 +++D+ G+T GKG+ G + R L R G P RV Sbjct: 221 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVAR 277 Query: 164 AGRMGGNRVTVKNLEVVS 181 AG+ G + T N ++ Sbjct: 278 AGQNGYHHRTEMNKKIYK 295 >gi|260790238|ref|XP_002590150.1| hypothetical protein BRAFLDRAFT_126055 [Branchiostoma floridae] gi|229275339|gb|EEN46161.1| hypothetical protein BRAFLDRAFT_126055 [Branchiostoma floridae] Length = 404 Score = 51.7 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++D+ G+T GKGF G R L R G P RV Sbjct: 210 VFGQDEMIDIIGITKGKGFKGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPARVGYGV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G N T N +V V Sbjct: 267 ARAGQKGYNHRTEINKKVYRV 287 >gi|268564071|ref|XP_002647082.1| C. briggsae CBR-RPL-3 protein [Caenorhabditis briggsae] gi|60393717|sp|Q9NBK4|RL3_CAEBR RecName: Full=60S ribosomal protein L3 gi|187036492|emb|CAP24473.1| CBR-RPL-3 protein [Caenorhabditis briggsae AF16] Length = 401 Score = 51.7 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 4/87 (4%) Query: 97 VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 F+ +++D G+T G GF G R + L R G P Sbjct: 204 QIQVDTVFSQDEMIDTIGVTKGHGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPS 260 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV 182 RV AG+ G + T+ N ++ + Sbjct: 261 RVAFTVARAGQKGFHHRTIINNKIYRI 287 >gi|42565416|gb|AAS20981.1| ribosomal protein L3 [Hyacinthus orientalis] Length = 263 Score = 51.7 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 46/156 (29%), Gaps = 15/156 (9%) Query: 38 HRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFS----SVNVSPKKKLFEFRVQKDDDLLP 93 ++ +G +Q + K + K L E +V Sbjct: 10 NKYESDDGKKEIQTQLDKMKKYATVIRVLAHTQLRKMKGLKQKKAHLMEIQVNGGTIAEK 69 Query: 94 V-------GSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145 V F +++D+ G+T GKG+ G + R L R Sbjct: 70 VDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKV 127 Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 G P RV AG+ G + T N ++ Sbjct: 128 ACIGAW-HPARVSYTVARAGQNGYHHRTEMNKKIYR 162 >gi|147833564|emb|CAN63848.1| hypothetical protein VITISV_039858 [Vitis vinifera] Length = 389 Score = 51.7 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 44/138 (31%), Gaps = 8/138 (5%) Query: 46 YMAVQ--VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103 Y +V + + + K + + V+ + V F Sbjct: 156 YASVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQK--VDYAYGFFEKQVPVDA-IF 212 Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 +++D+ G+T GKG+ G + R L R G P RV Sbjct: 213 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVAR 269 Query: 164 AGRMGGNRVTVKNLEVVS 181 AG+ G + T N ++ Sbjct: 270 AGQNGYHHRTEMNKKIYK 287 >gi|40882439|gb|AAR96131.1| RH62603p [Drosophila melanogaster] Length = 465 Score = 51.7 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++D G+T GKGF G R + L R G P RV Sbjct: 220 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 276 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 277 VARAGQKGYHHRTEINKKIYRI 298 >gi|38327504|gb|AAR17783.1| ribosomal protein L3 [Solanum lycopersicum] Length = 389 Score = 51.7 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 41/131 (31%), Gaps = 6/131 (4%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + + K + + V+ + V F +++D Sbjct: 163 LAHTQIRKMKGLKQKKAHLMEIQVNGGSIAQK--VDFAYGFFEKQVPVDA-VFQKDEMID 219 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 + G+T GKG+ G + R L R G P RV AG+ G + Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYH 276 Query: 171 RVTVKNLEVVS 181 T N +V Sbjct: 277 HRTEMNKKVYK 287 >gi|291223744|ref|XP_002731867.1| PREDICTED: ribosomal protein L3-like [Saccoglossus kowalevskii] Length = 404 Score = 51.7 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 31/81 (38%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKGF G R L R G P RV Sbjct: 210 VFVQDEMIDVIGVTKGKGFKGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPARVGYGV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N +V + Sbjct: 267 ARAGQKGYHHRTELNKKVYRI 287 >gi|237834163|ref|XP_002366379.1| 60S ribosomal protein L3, putative [Toxoplasma gondii ME49] gi|211964043|gb|EEA99238.1| 60S ribosomal protein L3, putative [Toxoplasma gondii ME49] gi|221486606|gb|EEE24867.1| 60S ribosomal protein L3, putative [Toxoplasma gondii GT1] gi|221508362|gb|EEE33949.1| 60S ribosomal protein L3, putative [Toxoplasma gondii VEG] Length = 389 Score = 51.7 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + FT G+++DV G+T G G G + R L R G P RV Sbjct: 206 AVFTEGEMIDVIGVTKGHGVKGVVSRWGVTRLP--RKTHRGLRKIACIGAW-HPARVQFQ 262 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 G+ G T N +V V Sbjct: 263 VPRHGQKGYFHRTEMNKKVYRV 284 >gi|325118597|emb|CBZ54148.1| 60S ribosomal protein L3, related [Neospora caninum Liverpool] Length = 398 Score = 51.7 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + FT G+++DV G+T G G G + R L R G P RV Sbjct: 206 AVFTEGEMLDVIGVTKGHGVKGVVSRWGVTRLP--RKTHRGLRKIACIGAW-HPARVQFQ 262 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 G+ G T N +V V Sbjct: 263 VPRHGQKGYFHRTEMNKKVYRV 284 >gi|50549253|ref|XP_502097.1| YALI0C21560p [Yarrowia lipolytica] gi|49647964|emb|CAG82417.1| YALI0C21560p [Yarrowia lipolytica] Length = 387 Score = 51.7 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 43/138 (31%), Gaps = 34/138 (24%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++D +T GKG+ G R L R G P V Sbjct: 208 VFEQDEMIDAIAITKGKGYEGTTHRWGTKKLP--RKTHRGLRKVACIGAW-HPANVQYTV 264 Query: 162 KMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLILV 191 +G+ G + T N +V V + +++ Sbjct: 265 ARSGQDGYHHRTSANHKVYRVGKGGDESNGSTEFDRTPKTITPMGGFVRYGEVNNDFLIL 324 Query: 192 KGCVPGAKKNSWILVRDS 209 KG +PG KK I +R S Sbjct: 325 KGSIPGVKKR-VITLRKS 341 >gi|321477553|gb|EFX88511.1| hypothetical protein DAPPUDRAFT_206128 [Daphnia pulex] Length = 412 Score = 51.7 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV G+T GKGF G R + L R G P RV Sbjct: 209 SLFAQDEMIDVIGVTKGKGFKGVTSRWHTRKLP--RKTHKGLRKVACIGAW-HPSRVQYT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEMNKKIYRI 287 >gi|291410166|ref|XP_002721357.1| PREDICTED: ribosomal protein L3-like isoform 2 [Oryctolagus cuniculus] Length = 351 Score = 51.7 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 66/203 (32%), Gaps = 31/203 (15%) Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52 + + K G+T + + G + VT++ V+ GY+ G Sbjct: 41 TAFLGYKAGLTHIVQEVDRPGSEVNKKEVVEAVTIVETPPMVVMGIV-----GYVETPRG 95 Query: 53 ---AGEAKVKNVSKPMRGFFSS--VNVSPKKKLFEFRVQKDDDLLPV--------GSVFS 99 +++S + F K L E +V + V Sbjct: 96 LRTFKMMFAEHISDKCKRRFYKNWHKSKKKAHLMEIQVNGGTVAEKLDWARERLEQQVPV 155 Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159 F +++DV G+T GKG+ R + L H R G P RV Sbjct: 156 SQVFGQDEMIDVIGVTKGKGYKAVTSRWHTKKLP--HKTHRGLRKVACIGAW-HPARVAF 212 Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182 + AG+ G + T N ++ + Sbjct: 213 SVAWAGQKGYHHRTEINKKIYKI 235 >gi|82623411|gb|ABB87120.1| ribosomal protein L3-like [Solanum tuberosum] Length = 389 Score = 51.7 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 41/131 (31%), Gaps = 6/131 (4%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + + K + + V+ + V F +++D Sbjct: 163 LAHTQIRKMKGLKQKKAHLMEIQVNGGSIAQK--VDFAYGFFEKQVPVDA-VFQKDEMID 219 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 + G+T GKG+ G + R L R G P RV AG+ G + Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYH 276 Query: 171 RVTVKNLEVVS 181 T N +V Sbjct: 277 HRTEMNKKVYK 287 >gi|118152392|gb|ABK63940.1| ribosomal protein L3-A2-II [Triticum aestivum] Length = 401 Score = 51.3 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 43/123 (34%), Gaps = 19/123 (15%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F ++VD+ G+T GKG+ G + R L R G P RV Sbjct: 210 AVFQKDEMVDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYT 266 Query: 161 KKMAGRMGGNRVTVKNLEVVS--------------VDDKRGLILVKGCVP--GAKKNSWI 204 AG+ G + T N ++ D I G P G K ++ Sbjct: 267 VARAGQNGYHHRTEMNKKIYKMGKSGQESHEACTEFDRTEKDITPMGGFPHYGVVKGDYL 326 Query: 205 LVR 207 +++ Sbjct: 327 MIK 329 >gi|332028947|gb|EGI68965.1| 60S ribosomal protein L3 [Acromyrmex echinatior] Length = 484 Score = 51.3 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV G+T GKG+ G R + L R G P RV Sbjct: 279 SVFASDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFT 335 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 336 VARAGQKGYHHRTEMNKKIYRI 357 >gi|297795267|ref|XP_002865518.1| hypothetical protein ARALYDRAFT_917513 [Arabidopsis lyrata subsp. lyrata] gi|297311353|gb|EFH41777.1| hypothetical protein ARALYDRAFT_917513 [Arabidopsis lyrata subsp. lyrata] Length = 375 Score = 51.3 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 4/91 (4%) Query: 92 LPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150 + G++ F +++DV G+T GKG+ G + R L R G Sbjct: 186 INGGTIIPIDAVFQKDEMIDVIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLREVACIGA 243 Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181 P RV AG+ G + T N ++ Sbjct: 244 W-HPARVSYTVARAGQNGYHHRTELNKKIYR 273 >gi|195389887|ref|XP_002053605.1| GJ23255 [Drosophila virilis] gi|194151691|gb|EDW67125.1| GJ23255 [Drosophila virilis] Length = 415 Score = 51.3 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++D G+T GKGF G R + L R G P RV Sbjct: 209 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEINKKIYRI 287 >gi|255641019|gb|ACU20789.1| unknown [Glycine max] Length = 323 Score = 51.3 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++D+ G+T GKG+ G + R L R G P RV Sbjct: 210 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFT 266 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N + V Sbjct: 267 VARAGQNGYHHRTELNKRIYKV 288 >gi|109100342|ref|XP_001106678.1| PREDICTED: 60S ribosomal protein L3-like isoform 1 [Macaca mulatta] Length = 354 Score = 51.3 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 67/203 (33%), Gaps = 31/203 (15%) Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52 + + K GMT + + G ++ VT++ + VV GY+ G Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVEMPPMVVVGI-----AGYVETPRG 98 Query: 53 ---AGEAKVKNVSKPMRGFFSS--VNVSPKKKLFEFRVQKDDDLLPV--------GSVFS 99 +++ + F K L E +V + V Sbjct: 99 LRTFKTVFAEHMGDECKRRFYKNWHKSKKKAHLTEIQVNGGTVAEKLDWARERLEQQVPV 158 Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159 F +++DV G+T GKG+ G + L R G R P RV Sbjct: 159 NQVFGQDEMIDVIGVTKGKGYKGVTSHWHTKKLP--RKTHRGLRKVACIGAR-HPARVAF 215 Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182 + AG+ G + T N ++ + Sbjct: 216 SVARAGQKGYHHRTEINKKIYKI 238 >gi|84095076|dbj|BAE66653.1| ribosomal protein L3 [Papilio xuthus] Length = 412 Score = 51.3 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++D G+T GKG+ G R + L R G P RV Sbjct: 209 SVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEMNKKIYRI 287 >gi|145324164|ref|NP_001077671.1| ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1); structural constituent of ribosome [Arabidopsis thaliana] gi|332193833|gb|AEE31954.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana] Length = 306 Score = 51.3 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 41/131 (31%), Gaps = 6/131 (4%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + + K + + ++ + V F +++D Sbjct: 80 LAHTQIRKMKGLKQKKAHMMEIQINGGTIAQK--VDFAYSFFEKQIPIEA-VFQKDEMID 136 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 + G+T GKG+ G + R L R G P RV AG+ G + Sbjct: 137 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYTVARAGQNGYH 193 Query: 171 RVTVKNLEVVS 181 T N ++ Sbjct: 194 HRTELNKKIYR 204 >gi|189240524|ref|XP_971875.2| PREDICTED: similar to ribosomal protein L3e [Tribolium castaneum] gi|270011378|gb|EFA07826.1| hypothetical protein TcasGA2_TC005395 [Tribolium castaneum] Length = 409 Score = 51.3 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 3/83 (3%) Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159 F +++D G+T GKG+ G R + L R G P RV Sbjct: 208 AQVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSF 264 Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 265 TVARAGQKGYHHRTEMNKKIYRI 287 >gi|308490853|ref|XP_003107618.1| CRE-RPL-3 protein [Caenorhabditis remanei] gi|308250487|gb|EFO94439.1| CRE-RPL-3 protein [Caenorhabditis remanei] Length = 401 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 4/87 (4%) Query: 97 VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 F+ +++D G+T G GF G R + L R G P Sbjct: 204 QIQVDTVFSQDEMIDTIGVTKGHGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPS 260 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV 182 RV AG+ G + T+ N ++ + Sbjct: 261 RVAFTVARAGQKGFHHRTIINNKIYKI 287 >gi|195329914|ref|XP_002031655.1| GM23925 [Drosophila sechellia] gi|194120598|gb|EDW42641.1| GM23925 [Drosophila sechellia] Length = 611 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++D G+T GKGF G R + L R G P RV Sbjct: 209 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEINKKIYRI 287 >gi|121543847|gb|ABM55588.1| putative ribosomal protein L3 [Maconellicoccus hirsutus] Length = 406 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 68/244 (27%), Gaps = 70/244 (28%) Query: 6 VARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH----------------- 38 + K GMT V + G ++ PVT++ +V Sbjct: 47 LGYKAGMTHVVREADRPGSKVNKKEIVEPVTIIETPPMVIVGVVGYIETPHGLKALSTVW 106 Query: 39 ---------RTLDKNGYMAVQVGAGEAKVKN--------VSKPMRGFFSSVNV------- 74 R KN Y A + +A K + K + V Sbjct: 107 AEHLSEDCRRRFYKNWYKAKKRAFTKASKKWQDPLGRKAIDKELAKISKYCKVVRVIAHT 166 Query: 75 --------SPKKKLFEFRVQKDDDLLPVG-------SVFSPSY-FTVGQLVDVTGMTIGK 118 K + E +V V S+ F +++D +T GK Sbjct: 167 QMKLLKFRQKKSHIMEIQVNGGTVPEKVQWAKAHFEKAVPVSHVFAQDEMIDCIAVTKGK 226 Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178 G+ G R + L R G P RV AG+ G + T N + Sbjct: 227 GYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFTVARAGQKGYHHRTEINKK 283 Query: 179 VVSV 182 + + Sbjct: 284 IYRI 287 >gi|268306352|gb|ACY95297.1| ribosomal protein L3 [Manduca sexta] Length = 414 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++D G+T GKG+ G R + L R G P RV Sbjct: 209 SVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEMNKKIYRI 287 >gi|198455295|ref|XP_001359937.2| GA18487 [Drosophila pseudoobscura pseudoobscura] gi|198133184|gb|EAL29089.2| GA18487 [Drosophila pseudoobscura pseudoobscura] Length = 412 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++D G+T GKGF G R + L R G P RV Sbjct: 209 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEINKKIYRI 287 >gi|15218306|ref|NP_175009.1| ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1); structural constituent of ribosome [Arabidopsis thaliana] gi|42571751|ref|NP_973966.1| ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1); structural constituent of ribosome [Arabidopsis thaliana] gi|79319275|ref|NP_001031146.1| ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1); structural constituent of ribosome [Arabidopsis thaliana] gi|27735225|sp|P17094|RL31_ARATH RecName: Full=60S ribosomal protein L3-1; AltName: Full=Protein EMBRYO DEFECTIVE 2207 gi|11935191|gb|AAG42011.1|AF327421_1 putative ribosomal protein [Arabidopsis thaliana] gi|13487800|gb|AAK27726.1|AF361101_1 putative ribosomal protein [Arabidopsis thaliana] gi|13605657|gb|AAK32822.1|AF361809_1 At1g43170/F1I21_18 [Arabidopsis thaliana] gi|3617741|gb|AAC36018.1| L3 cytoplasmic ribosomal protein [Arabidopsis thaliana] gi|14517418|gb|AAK62599.1| At1g43170/F1I21_18 [Arabidopsis thaliana] gi|15450559|gb|AAK96457.1| At1g43170/F1I21_18 [Arabidopsis thaliana] gi|15982761|gb|AAL09721.1| At1g43170/F1I21_18 [Arabidopsis thaliana] gi|332193830|gb|AEE31951.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana] gi|332193831|gb|AEE31952.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana] gi|332193832|gb|AEE31953.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana] gi|332193834|gb|AEE31955.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana] gi|332193835|gb|AEE31956.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana] gi|332193836|gb|AEE31957.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana] gi|332193837|gb|AEE31958.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana] gi|332193838|gb|AEE31959.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana] Length = 389 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 41/131 (31%), Gaps = 6/131 (4%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + + K + + ++ + V F +++D Sbjct: 163 LAHTQIRKMKGLKQKKAHMMEIQINGGTIAQK--VDFAYSFFEKQIPIEA-VFQKDEMID 219 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 + G+T GKG+ G + R L R G P RV AG+ G + Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYTVARAGQNGYH 276 Query: 171 RVTVKNLEVVS 181 T N ++ Sbjct: 277 HRTELNKKIYR 287 >gi|195107417|ref|XP_001998310.1| GI23698 [Drosophila mojavensis] gi|193914904|gb|EDW13771.1| GI23698 [Drosophila mojavensis] Length = 415 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F ++VD G+T GKGF G R + L R G P RV Sbjct: 210 NVFGQDEMVDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 266 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 VARAGQKGYHHRTEINKKIYRI 288 >gi|23397228|gb|AAN31896.1| putative ribosomal protein [Arabidopsis thaliana] Length = 389 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 41/131 (31%), Gaps = 6/131 (4%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + + K + + ++ + V F +++D Sbjct: 163 LAHTQIRKMKGLKQKKAHMMEIQINGGTIAQK--VDFAYSFFEKQIPIEA-VFQKDEMID 219 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 + G+T GKG+ G + R L R G P RV AG+ G + Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYTVARAGQNGYH 276 Query: 171 RVTVKNLEVVS 181 T N ++ Sbjct: 277 HRTELNKKIYR 287 >gi|112982798|ref|NP_001037126.1| ribosomal protein L3 [Bombyx mori] gi|54609193|gb|AAV34812.1| ribosomal protein L3 [Bombyx mori] Length = 413 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++D G+T GKG+ G R + L R G P RV Sbjct: 209 SVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEMNKKIYRI 287 >gi|166858|gb|AAA66160.1| ribosomal protein [Arabidopsis thaliana] Length = 389 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 41/131 (31%), Gaps = 6/131 (4%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + + K + + ++ + V F +++D Sbjct: 163 LAHTQIRKMKGLKQKKAHMMEIQINGGTIAQK--VDFAYSFFEKQIPIEA-VFQKDEMID 219 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 + G+T GKG+ G + R L R G P RV AG+ G + Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYTVARAGQNGYH 276 Query: 171 RVTVKNLEVVS 181 T N ++ Sbjct: 277 HRTELNKKIYR 287 >gi|254693009|gb|ACT79354.1| LP14077p [Drosophila melanogaster] Length = 418 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++D G+T GKGF G R + L R G P RV Sbjct: 211 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 267 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 268 VARAGQKGYHHRTEINKKIYRI 289 >gi|256000845|gb|ACU51763.1| RE52161p [Drosophila melanogaster] Length = 316 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++D G+T GKGF G R + L R G P RV Sbjct: 109 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 165 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 166 VARAGQKGYHHRTEINKKIYRI 187 >gi|18253047|gb|AAL62468.1| ribosomal protein L3 [Spodoptera frugiperda] Length = 413 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++D G+T GKG+ G R + L R G P RV Sbjct: 209 SVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEMNKKIYRI 287 >gi|321458193|gb|EFX69265.1| hypothetical protein DAPPUDRAFT_301006 [Daphnia pulex] Length = 416 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV G+T GKGF G R + L R G P RV Sbjct: 209 SLFAQDEMIDVIGVTKGKGFKGVTSRWHTRKLP--RKTHKGLRKVACIGAW-HPSRVQFT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEMNKKIYRI 287 >gi|17737907|ref|NP_524316.1| ribosomal protein L3, isoform A [Drosophila melanogaster] gi|195571809|ref|XP_002103895.1| GD18739 [Drosophila simulans] gi|3122718|sp|O16797|RL3_DROME RecName: Full=60S ribosomal protein L3 gi|2384754|gb|AAC26144.1| ribosomal protein L3 [Drosophila melanogaster] gi|23170971|gb|AAF54610.2| ribosomal protein L3, isoform A [Drosophila melanogaster] gi|194199822|gb|EDX13398.1| GD18739 [Drosophila simulans] Length = 416 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++D G+T GKGF G R + L R G P RV Sbjct: 209 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEINKKIYRI 287 >gi|195157752|ref|XP_002019760.1| GL12566 [Drosophila persimilis] gi|194116351|gb|EDW38394.1| GL12566 [Drosophila persimilis] Length = 415 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++D G+T GKGF G R + L R G P RV Sbjct: 209 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEINKKIYRI 287 >gi|195499987|ref|XP_002097183.1| GE26079 [Drosophila yakuba] gi|194183284|gb|EDW96895.1| GE26079 [Drosophila yakuba] Length = 416 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++D G+T GKGF G R + L R G P RV Sbjct: 209 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEINKKIYRI 287 >gi|194902102|ref|XP_001980590.1| GG17978 [Drosophila erecta] gi|190652293|gb|EDV49548.1| GG17978 [Drosophila erecta] Length = 416 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++D G+T GKGF G R + L R G P RV Sbjct: 209 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEINKKIYRI 287 >gi|312385734|gb|EFR30160.1| hypothetical protein AND_00422 [Anopheles darlingi] Length = 405 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F+ +++D +T GKGF G R + L R G P RV Sbjct: 197 VFSQDEMIDCVAVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVAFTV 253 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 254 ARAGQKGYHHRTELNKKIYRI 274 >gi|156544034|ref|XP_001600115.1| PREDICTED: similar to ribosomal protein L3 [Nasonia vitripennis] Length = 419 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 3/85 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++DV G+T GKG+ G R + L R G P RV Sbjct: 209 NVFAPDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDK 185 AG+ G + T N ++ + + Sbjct: 266 VARAGQKGYHHRTEMNKKIYRIGQE 290 >gi|66566113|ref|XP_624821.1| PREDICTED: 60S ribosomal protein L3 [Apis mellifera] Length = 415 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++DV G+T GKG+ G R + L R G P RV Sbjct: 209 NVFAPDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEMNKKIYRI 287 >gi|195453495|ref|XP_002073813.1| GK14309 [Drosophila willistoni] gi|194169898|gb|EDW84799.1| GK14309 [Drosophila willistoni] Length = 414 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F ++VD G+T GKGF G R + L R G P RV Sbjct: 209 NVFGQDEMVDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEINKKIYRI 287 >gi|170578047|ref|XP_001894243.1| 60S ribosomal protein L3 [Brugia malayi] gi|158599245|gb|EDP36917.1| 60S ribosomal protein L3, putative [Brugia malayi] Length = 430 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++D G+T GKGF G R + L R G P RV Sbjct: 243 SVFAQDEMIDTIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFT 299 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 300 VARAGQKGYHHRTEVNKKIYRI 321 >gi|195055484|ref|XP_001994649.1| GH14923 [Drosophila grimshawi] gi|193892412|gb|EDV91278.1| GH14923 [Drosophila grimshawi] Length = 417 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F ++VD G+T GKGF G R + L R G P RV Sbjct: 210 VFGQDEMVDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTTV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYRI 287 >gi|194743868|ref|XP_001954422.1| GF16740 [Drosophila ananassae] gi|190627459|gb|EDV42983.1| GF16740 [Drosophila ananassae] Length = 415 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++D G+T GKGF G R + L R G P RV Sbjct: 209 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEINKKIYRI 287 >gi|297846744|ref|XP_002891253.1| hypothetical protein ARALYDRAFT_473757 [Arabidopsis lyrata subsp. lyrata] gi|297337095|gb|EFH67512.1| hypothetical protein ARALYDRAFT_473757 [Arabidopsis lyrata subsp. lyrata] Length = 389 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 41/131 (31%), Gaps = 6/131 (4%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + + K + + ++ + V F +++D Sbjct: 163 LAHTQIRKMKGLKQKKAHMMEIQINGGTIAQK--VDFAYSFFEKQIPIEA-VFQKDEMID 219 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 + G+T GKG+ G + R L R G P RV AG+ G + Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYTVARAGQNGYH 276 Query: 171 RVTVKNLEVVS 181 T N ++ Sbjct: 277 HRTELNKKIYR 287 >gi|306922439|gb|ADN07433.1| RE73632p [Drosophila melanogaster] Length = 208 Score = 50.5 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++D G+T GKGF G R + L R G P RV Sbjct: 109 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 165 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 166 VARAGQKGYHHRTEINKKIYRI 187 >gi|289743297|gb|ADD20396.1| ribosomal protein L3 [Glossina morsitans morsitans] Length = 413 Score = 50.5 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++D G+T GKGF G R + L R G P RV Sbjct: 209 NVFGQDEMIDCIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSTT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEINKKIYRI 287 >gi|115725235|ref|XP_791350.2| PREDICTED: similar to Ribosomal protein L3 [Strongylocentrotus purpuratus] gi|115968341|ref|XP_001177867.1| PREDICTED: similar to Ribosomal protein L3 [Strongylocentrotus purpuratus] Length = 404 Score = 50.5 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 30/82 (36%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F +L+D+ G+T G GF G R L R G P RV Sbjct: 209 EVFGQDELIDIIGVTKGHGFKGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPARVGYG 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N +V V Sbjct: 266 VARAGQKGYHHRTEINKKVYRV 287 >gi|5762260|dbj|BAA83471.1| Csf-3 [Cucumis sativus] Length = 219 Score = 50.5 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++D+ G+T GKG+ G + R L R G P RV Sbjct: 40 AVFQKDEMIDLIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFT 96 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N +V + Sbjct: 97 VARAGQNGYHHRTEMNKKVYKI 118 >gi|37654302|gb|AAQ96256.1| LRRGT00043 [Rattus norvegicus] Length = 867 Score = 50.5 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F G+++DV GMT GKG+ G R + R G F Sbjct: 349 VFGQGEMIDVMGMTKGKGYKGVTSRWHTKKPP--RKTHQGLRKVACIGAWLPAHVAFS-V 405 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 406 ARAGQKGYHHQTETNKKIYKI 426 >gi|264667433|gb|ACY71302.1| ribosomal protein L3 [Chrysomela tremulae] Length = 414 Score = 50.5 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F +++D G+T G G+ G R + L R G P RV Sbjct: 209 EVFAQDEMIDCIGVTKGHGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEMNKKIYRI 287 >gi|124802670|ref|XP_001347556.1| 60S ribosomal protein L3, putative [Plasmodium falciparum 3D7] gi|23495138|gb|AAN35469.1| 60S ribosomal protein L3, putative [Plasmodium falciparum 3D7] Length = 386 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 45/127 (35%), Gaps = 9/127 (7%) Query: 56 AKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMT 115 + K S K+KL EF + + LPV +V F +++DV +T Sbjct: 165 KTPLRMKKAHIMEVQINGGSMKEKL-EFVKEMLEKNLPVSTV-----FNPNEMIDVISVT 218 Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175 G G G + R+ L R G P RV G+ G T + Sbjct: 219 KGHGTKGVVSRYGVKRLP--RKTHRGLRKVACIGAW-HPARVQFQIPRHGQKGYFHRTER 275 Query: 176 NLEVVSV 182 N ++ + Sbjct: 276 NKKIYRI 282 >gi|168060915|ref|XP_001782438.1| predicted protein [Physcomitrella patens subsp. patens] gi|162666109|gb|EDQ52773.1| predicted protein [Physcomitrella patens subsp. patens] Length = 392 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 63/204 (30%), Gaps = 41/204 (20%) Query: 46 YMAVQ--VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103 Y +V + + + K + + + V+ + + PV F Sbjct: 156 YASVIRVLAHTQVRKLKGIKQKKAHLAEIQVNGGTIAEKVDFGYNLFEKPV--PVDA-VF 212 Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 +++D+ G+T G G+ G + R L R G P RV Sbjct: 213 NKDEMIDIIGVTRGHGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVAR 269 Query: 164 AGRMGGNRVTVKNLEVVSV--------------------------------DDKRGLILV 191 AG+ G + T N +V V + +++ Sbjct: 270 AGQNGYHHRTEMNKKVYKVGKSADKESFSASTEFDVTEKEITPMGGFAHYGIVREDYLMI 329 Query: 192 KGCVPGAKKNSWILVRDSFKSAVN 215 KG V G KK I +R S V+ Sbjct: 330 KGGVMGPKKR-VITLRQSLYKQVS 352 >gi|302769558|ref|XP_002968198.1| hypothetical protein SELMODRAFT_270706 [Selaginella moellendorffii] gi|300163842|gb|EFJ30452.1| hypothetical protein SELMODRAFT_270706 [Selaginella moellendorffii] Length = 389 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 46/137 (33%), Gaps = 4/137 (2%) Query: 46 YMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105 Y +V KV+N+ + + + +V + S F Sbjct: 156 YGSVIRVLAHTKVRNLKGIKQKKAHLMEIQVNGGTTAEKVDFAYNFFEKAVPID-SVFRK 214 Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165 +++DV G+T G G+ G + R L R G P RV AG Sbjct: 215 DEMIDVIGVTKGHGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAG 271 Query: 166 RMGGNRVTVKNLEVVSV 182 + G + T N ++ + Sbjct: 272 QNGYHHRTEMNKKIYKI 288 >gi|70909601|emb|CAJ17226.1| ribosomal protein L3e [Scarabaeus laticollis] Length = 410 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++D G+T GKG+ G R + L R G P RV Sbjct: 209 NVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEMNKKIYRI 287 >gi|302788822|ref|XP_002976180.1| hypothetical protein SELMODRAFT_267945 [Selaginella moellendorffii] gi|300156456|gb|EFJ23085.1| hypothetical protein SELMODRAFT_267945 [Selaginella moellendorffii] Length = 389 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 46/137 (33%), Gaps = 4/137 (2%) Query: 46 YMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105 Y +V KV+N+ + + + +V + S F Sbjct: 156 YGSVIRVLAHTKVRNLKGIKQKKAHLMEIQVNGGTTAEKVDFAYNFFEKAVPID-SVFRK 214 Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165 +++DV G+T G G+ G + R L R G P RV AG Sbjct: 215 DEMIDVIGVTKGHGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAG 271 Query: 166 RMGGNRVTVKNLEVVSV 182 + G + T N ++ + Sbjct: 272 QNGYHHRTEMNKKIYKI 288 >gi|118152396|gb|ABK63942.1| ribosomal protein L3-A3 [Triticum aestivum] gi|118152398|gb|ABK63943.1| ribosomal protein L3-A3 [Triticum aestivum] gi|146141400|tpg|DAA01148.1| TPA_inf: ribosomal protein L3A-3 [Triticum aestivum] Length = 389 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 3/81 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F ++VD+ G+T GKG+ G + R L R G P RV Sbjct: 210 AVFQKDEMVDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYT 266 Query: 161 KKMAGRMGGNRVTVKNLEVVS 181 AG+ G + T N ++ Sbjct: 267 VARAGQNGYHHRTEMNKKIYK 287 >gi|226480220|emb|CAX78774.1| ribosomal protein L3 [Schistosoma japonicum] Length = 327 Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F+ +++DV G+T GKGF G R + L R G P RV ++ Sbjct: 117 NVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVARS 173 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G T N ++ + Sbjct: 174 VARAGQKGYFHRTELNKKIYRI 195 >gi|33526886|gb|AAQ21397.1| ribosomal protein L3 [Triticum aestivum] gi|33526907|gb|AAQ21398.1| ribosomal protein L3 [Triticum aestivum] gi|34105766|gb|AAQ62074.1| ribosomal protein L3 [Triticum aestivum] gi|118152391|gb|ABK63939.1| ribosomal protein L3-A2-I [Triticum aestivum] gi|118152394|gb|ABK63941.1| ribosomal protein L3-A2 [Triticum aestivum] gi|146141398|tpg|DAA01147.1| TPA_inf: ribosomal protein L3A-2 [Triticum aestivum] Length = 389 Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 3/81 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F ++VD+ G+T GKG+ G + R L R G P RV Sbjct: 210 AVFQKDEMVDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYT 266 Query: 161 KKMAGRMGGNRVTVKNLEVVS 181 AG+ G + T N ++ Sbjct: 267 VARAGQNGYHHRTEMNKKIYK 287 >gi|313103624|pdb|3IZ5|C Chain C, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome gi|315113296|pdb|3IZR|C Chain C, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome gi|33526877|gb|AAQ21396.1| ribosomal protein L3 [Triticum aestivum] gi|33526922|gb|AAQ21399.1| ribosomal protein L3 [Triticum aestivum] gi|34105776|gb|AAQ62079.1| ribosomal protein L3 [Triticum aestivum] gi|118152406|gb|ABK63947.1| ribosomal protein L3-A1 [Triticum aestivum] gi|146141402|tpg|DAA01149.1| TPA_inf: ribosomal protein L3A-1 [Triticum aestivum] Length = 389 Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 3/81 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F ++VD+ G+T GKG+ G + R L R G P RV Sbjct: 210 AVFQKDEMVDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSYT 266 Query: 161 KKMAGRMGGNRVTVKNLEVVS 181 AG+ G + T N ++ Sbjct: 267 VARAGQNGYHHRTEMNKKIYK 287 >gi|307204449|gb|EFN83156.1| 60S ribosomal protein L3 [Harpegnathos saltator] Length = 402 Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV G+T GKG+ G R + L R G P RV Sbjct: 196 SVFARDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFT 252 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 253 VARAGQKGYHHRTEMNKKIYRI 274 >gi|291410164|ref|XP_002721356.1| PREDICTED: ribosomal protein L3-like isoform 1 [Oryctolagus cuniculus] Length = 400 Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ R + L H R G P RV + Sbjct: 207 VFGQDEMIDVIGVTKGKGYKAVTSRWHTKKLP--HKTHRGLRKVACIGAW-HPARVAFSV 263 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 264 AWAGQKGYHHRTEINKKIYKI 284 >gi|193580256|ref|XP_001951042.1| PREDICTED: 60S ribosomal protein L3-like [Acyrthosiphon pisum] Length = 408 Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 31/81 (38%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++D G+T G+G+ G R + L R G P RV Sbjct: 210 VFAPDEMIDCIGVTKGRGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFTV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYRI 287 >gi|71984538|ref|NP_001021254.1| Ribosomal Protein, Large subunit family member (rpl-3) [Caenorhabditis elegans] gi|1710557|sp|P50880|RL3_CAEEL RecName: Full=60S ribosomal protein L3 gi|1181129|emb|CAA93269.1| ribosomal protein L3 [Caenorhabditis elegans] gi|1181131|emb|CAA93268.1| ribosomal protein L3 [Caenorhabditis elegans] gi|3874745|emb|CAA91277.1| C. elegans protein F13B10.2a, confirmed by transcript evidence [Caenorhabditis elegans] gi|3875827|emb|CAA90183.1| C. elegans protein F13B10.2a, confirmed by transcript evidence [Caenorhabditis elegans] Length = 401 Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++D G+T G GF G R + L R G P RV Sbjct: 210 VFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVAFTV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T+ N ++ + Sbjct: 267 ARAGQKGFHHRTIINNKIYRI 287 >gi|75107053|sp|P82191|RK3_SPIOL RecName: Full=50S ribosomal protein L3, chloroplastic Length = 45 Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTL 41 GV+ KLGM + +G +PVTV+ + V +T Sbjct: 6 IGVMGTKLGMMSFFEEDGTVVPVTVIGFKEGNIVTQVKTE 45 >gi|226475914|emb|CAX72047.1| ribosomal protein L3 [Schistosoma japonicum] Length = 419 Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F+ +++DV G+T GKGF G R + L R G P RV ++ Sbjct: 209 NVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVARS 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G T N ++ + Sbjct: 266 VARAGQKGYFHRTELNKKIYRI 287 >gi|226480222|emb|CAX78775.1| ribosomal protein L3 [Schistosoma japonicum] Length = 419 Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F+ +++DV G+T GKGF G R + L R G P RV ++ Sbjct: 209 NVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVARS 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G T N ++ + Sbjct: 266 VARAGQKGYFHRTELNKKIYRI 287 >gi|226475922|emb|CAX72051.1| ribosomal protein L3 [Schistosoma japonicum] Length = 328 Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F+ +++DV G+T GKGF G R + L R G P RV ++ Sbjct: 118 NVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVARS 174 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G T N ++ + Sbjct: 175 VARAGQKGYFHRTELNKKIYRI 196 >gi|226475916|emb|CAX72048.1| ribosomal protein L3 [Schistosoma japonicum] Length = 419 Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F+ +++DV G+T GKGF G R + L R G P RV ++ Sbjct: 209 NVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVARS 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G T N ++ + Sbjct: 266 VARAGQKGYFHRTELNKKIYRI 287 >gi|29841161|gb|AAP06174.1| SJCHGC06297 protein [Schistosoma japonicum] gi|226475918|emb|CAX72049.1| ribosomal protein L3 [Schistosoma japonicum] gi|226475924|emb|CAX72052.1| ribosomal protein L3 [Schistosoma japonicum] gi|226475926|emb|CAX72053.1| ribosomal protein L3 [Schistosoma japonicum] gi|226475928|emb|CAX72054.1| ribosomal protein L3 [Schistosoma japonicum] gi|226480226|emb|CAX78777.1| ribosomal protein L3 [Schistosoma japonicum] gi|226480228|emb|CAX78778.1| ribosomal protein L3 [Schistosoma japonicum] gi|226480236|emb|CAX78782.1| ribosomal protein L3 [Schistosoma japonicum] gi|226480238|emb|CAX78783.1| ribosomal protein L3 [Schistosoma japonicum] gi|226480240|emb|CAX78784.1| ribosomal protein L3 [Schistosoma japonicum] gi|226480242|emb|CAX78785.1| ribosomal protein L3 [Schistosoma japonicum] gi|226480244|emb|CAX78786.1| ribosomal protein L3 [Schistosoma japonicum] Length = 419 Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F+ +++DV G+T GKGF G R + L R G P RV ++ Sbjct: 209 NVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVARS 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G T N ++ + Sbjct: 266 VARAGQKGYFHRTELNKKIYRI 287 >gi|156359547|ref|XP_001624829.1| predicted protein [Nematostella vectensis] gi|156211631|gb|EDO32729.1| predicted protein [Nematostella vectensis] Length = 406 Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 29/81 (35%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F+ +++DV G+T G GF G R L R G F Sbjct: 211 VFSPDEMIDVIGVTKGHGFKGVTYRWGTKKLP--RKTHKGLRKVACIGAWHPARVSFS-V 267 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 268 ARAGQAGYHHRTELNKKIYRI 288 >gi|226475912|emb|CAX72046.1| ribosomal protein L3 [Schistosoma japonicum] Length = 341 Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F+ +++DV G+T GKGF G R + L R G P RV ++ Sbjct: 131 NVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVARS 187 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G T N ++ + Sbjct: 188 VTRAGQKGYFHRTELNKKIYRI 209 >gi|78190599|gb|ABB29621.1| ribosomal protein 3 large subunit [Priapulus caudatus] Length = 319 Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++D+ G+T G GF G R + L R G P RV Sbjct: 154 SVFAADEMIDMVGVTKGHGFKGVTSRWHCKKLP--RKTHKGLRKVACIGAW-HPSRVQFT 210 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N +V + Sbjct: 211 VARAGQKGYHHRTEINKKVYRI 232 >gi|226480246|emb|CAX78787.1| ribosomal protein L3 [Schistosoma japonicum] gi|226480248|emb|CAX78788.1| ribosomal protein L3 [Schistosoma japonicum] Length = 328 Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F+ +++DV G+T GKGF G R + L R G P RV ++ Sbjct: 118 NVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVARS 174 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G T N ++ + Sbjct: 175 VARAGQKGYFHRTELNKKIYRI 196 >gi|70909599|emb|CAJ17225.1| ribosomal protein L3e [Mycetophagus quadripustulatus] Length = 283 Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++D G+T GKG+ G R + L R G P RV Sbjct: 86 VFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFTV 142 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 143 ARAGQKGYHHRTEMNKKIYRI 163 >gi|71032875|ref|XP_766079.1| 60S ribosomal protein L3 [Theileria parva strain Muguga] gi|68353036|gb|EAN33796.1| 60S ribosomal protein L3, putative [Theileria parva] Length = 384 Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 48/139 (34%), Gaps = 34/139 (24%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T G G G + R+ L R G P RV Sbjct: 206 VFGENEMLDVLGVTKGHGVKGVVSRYGVTRLP--RKTHRGLRKVACIGSW-HPARVQFQV 262 Query: 162 KMAGRMGGNRVTVKNLEVVSVD------------------------------DKRGLILV 191 G+ G ++ T +N ++ + + +++ Sbjct: 263 PRHGQKGYHKRTERNKKIYRLGLGSSARNGSTDSDLTEKTITPMGGFPHYGVVREDFLML 322 Query: 192 KGCVPGAKKNSWILVRDSF 210 KGC+PG +K I +R + Sbjct: 323 KGCIPGTRKR-VITLRKTL 340 >gi|226480230|emb|CAX78779.1| ribosomal protein L3 [Schistosoma japonicum] Length = 329 Score = 49.8 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F+ +++DV G+T GKGF G R + L R G P RV ++ Sbjct: 119 NVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVARS 175 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G T N ++ + Sbjct: 176 VARAGQKGYFHRTELNKKIYRI 197 >gi|71984550|ref|NP_001021256.1| Ribosomal Protein, Large subunit family member (rpl-3) [Caenorhabditis elegans] gi|50507482|emb|CAH04728.1| C. elegans protein F13B10.2d, confirmed by transcript evidence [Caenorhabditis elegans] gi|51011805|emb|CAH10798.1| C. elegans protein F13B10.2d, confirmed by transcript evidence [Caenorhabditis elegans] Length = 303 Score = 49.8 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++D G+T G GF G R + L R G P RV Sbjct: 112 VFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVAFTV 168 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T+ N ++ + Sbjct: 169 ARAGQKGFHHRTIINNKIYRI 189 >gi|307169360|gb|EFN62081.1| 60S ribosomal protein L3 [Camponotus floridanus] Length = 402 Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++DV G+T GKG+ G R + L R G P RV Sbjct: 196 NVFASDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFT 252 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 253 VARAGQKGYHHRTEMNKKIYRI 274 >gi|298705189|emb|CBJ28620.1| Ribosomal protein L3 [Ectocarpus siliculosus] Length = 423 Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 38/139 (27%), Gaps = 34/139 (24%) Query: 96 SVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP 154 F + +DV G + G G G + R L R G Sbjct: 234 QKVPVDAVFAKDECIDVLGASKGHGTEGVVTRWGVTRLP--RKTHRGLRKVACIGAWHPA 291 Query: 155 GRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL-------------------------- 188 F AG+ G + T N ++ + K + Sbjct: 292 RVSFS-VARAGQHGYHHRTELNKKIYRIGKKGDVASASTEADLTVKHITPLGGFPHYGEI 350 Query: 189 ----ILVKGCVPGAKKNSW 203 +++KGCV G KK Sbjct: 351 NEDWLMLKGCVIGCKKRCI 369 >gi|225718854|gb|ACO15273.1| 60S ribosomal protein L3 [Caligus clemensi] Length = 410 Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F+ +++D G+T GKGF G R + L R G P R+ Sbjct: 209 SVFSKDEMIDTIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRIQYT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEINKKIYDI 287 >gi|324528901|gb|ADY48966.1| 60S ribosomal protein L3 [Ascaris suum] Length = 222 Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 3/81 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++D G+T GKGF G R + L R G P RV Sbjct: 29 SVFAQDEMIDCIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFT 85 Query: 161 KKMAGRMGGNRVTVKNLEVVS 181 AG+ G + T N ++ Sbjct: 86 VARAGQKGYHHRTEVNKKIYR 106 >gi|118484565|gb|ABK94156.1| unknown [Populus trichocarpa] Length = 389 Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 41/131 (31%), Gaps = 6/131 (4%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + + K + + V+ + V F +++D Sbjct: 163 LAHTQIRKMKGLKQKKAHLMEIQVNGGDVAKK--VDFAYSFFEKQIPIDA-IFQKDEMID 219 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170 + G+T GKG+ G + R L R G P RV AG+ G + Sbjct: 220 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVARAGQNGYH 276 Query: 171 RVTVKNLEVVS 181 T + ++ Sbjct: 277 HRTELSKKIYK 287 >gi|168026163|ref|XP_001765602.1| predicted protein [Physcomitrella patens subsp. patens] gi|162683240|gb|EDQ69652.1| predicted protein [Physcomitrella patens subsp. patens] Length = 392 Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 46/139 (33%), Gaps = 8/139 (5%) Query: 46 YMAVQ--VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103 Y +V + + + K + + + V+ + V L F Sbjct: 156 YASVIRVLAHTQVRKLKGIKQKKAHLAEIQVNGGNIAEK--VDFGFKLFEKWVSVDA-VF 212 Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163 +++D+ G+T G G+ G + R L R G P RV Sbjct: 213 RKDEMIDIIGVTRGHGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFTVAR 269 Query: 164 AGRMGGNRVTVKNLEVVSV 182 AG+ G + T N +V V Sbjct: 270 AGQNGYHHRTEMNKKVYKV 288 >gi|196000674|ref|XP_002110205.1| expressed hypothetical protein [Trichoplax adhaerens] gi|190588329|gb|EDV28371.1| expressed hypothetical protein [Trichoplax adhaerens] Length = 399 Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 32/138 (23%), Positives = 48/138 (34%), Gaps = 34/138 (24%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F+ +++D+ G T GKGF G R L R G P RV + Sbjct: 216 VFSQDEMIDIIGATKGKGFRGVTFRWGTKKLP--RKTHKGLRKVACIGSW-HPSRVGFSI 272 Query: 162 KMAGRMGGNRVTVKNLEVVSVDD---KRG---------------------------LILV 191 AG+ G + T N ++ + ++ I++ Sbjct: 273 ARAGQTGYHHRTEVNKKIYRIGSGKDEKNASTGYDTTVKKITPVGGFPHYGVVTQDYIML 332 Query: 192 KGCVPGAKKNSWILVRDS 209 KGCV G KK I +R S Sbjct: 333 KGCVMGPKKR-VITLRKS 349 >gi|256079531|ref|XP_002576040.1| 60S ribosomal protein L3 [Schistosoma mansoni] gi|238661298|emb|CAZ32275.1| 60S ribosomal protein L3, putative [Schistosoma mansoni] Length = 419 Score = 49.4 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 4/87 (4%) Query: 97 VFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155 S S F+ +++DV G+T GKGF G R + L R G P Sbjct: 204 QISVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPA 260 Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSV 182 RV ++ AG+ G T N ++ + Sbjct: 261 RVARSVARAGQKGYFHRTELNKKIYKI 287 >gi|82596814|ref|XP_726417.1| ribosomal protein L3 [Plasmodium yoelii yoelii str. 17XNL] gi|23481819|gb|EAA17982.1| ribosomal protein L3, putative [Plasmodium yoelii yoelii] Length = 386 Score = 49.4 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 3/86 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++DV +T G G G + R+ L R G P RV Sbjct: 204 NVFNTNEMIDVISVTKGHGTKGVVSRYGVKRLP--RKTHRGLRKVACIGAW-HPARVQFQ 260 Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKR 186 G+ G T +N ++ + K+ Sbjct: 261 VPRHGQKGYFHRTERNKKIYRIGLKK 286 >gi|324517742|gb|ADY46908.1| 60S ribosomal protein L3 [Ascaris suum] Length = 402 Score = 49.4 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 3/81 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++D G+T GKGF G R + L R G P RV Sbjct: 209 SVFAQDEMIDCIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVS 181 AG+ G + T N ++ Sbjct: 266 VARAGQKGYHHRTEVNKKIYR 286 >gi|315115447|gb|ADT80696.1| ribosomal protein L3 [Euphydryas aurinia] Length = 412 Score = 49.4 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 3/81 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++D G+T GKG+ G R + L R G P RV Sbjct: 209 SVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVS 181 AG+ G + T N ++ Sbjct: 266 VARAGQKGYHHRTEMNKKIYR 286 >gi|321263851|ref|XP_003196643.1| large subunit ribosomal protein L3 [Cryptococcus gattii WM276] gi|317463120|gb|ADV24856.1| Large subunit ribosomal protein L3, putative [Cryptococcus gattii WM276] Length = 390 Score = 49.4 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 34/100 (34%), Gaps = 8/100 (8%) Query: 83 FRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISH 142 F + + VG S F + +D+ G+T G G+ G R L Sbjct: 195 FARSHFEKTVEVG-----SVFEQDECIDIIGVTKGHGYEGVTARWGTTRLP--RKTHRGL 247 Query: 143 RSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 R G +F AG+ G + T N ++ + Sbjct: 248 RKVACIGAWHPSNVMFS-VARAGQRGYHSRTSMNHKIYRI 286 >gi|1350745|sp|P49149|RL3_TOXCA RecName: Full=60S ribosomal protein L3 gi|596082|gb|AAA92285.1| ribosomal protein L3 [Toxocara canis] Length = 402 Score = 49.4 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 3/81 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++D G+T GKGF G R + L R G P RV Sbjct: 209 SVFAQDEMIDCIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVS 181 AG+ G + T N ++ Sbjct: 266 VARAGQKGYHHRTEVNKKIYR 286 >gi|221054097|ref|XP_002261796.1| ribosomal protein L3 [Plasmodium knowlesi strain H] gi|193808256|emb|CAQ38959.1| ribosomal protein L3, putative [Plasmodium knowlesi strain H] Length = 386 Score = 49.4 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 3/86 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++DV +T G G G + R+ L R G P RV Sbjct: 204 NVFNTNEMIDVISVTKGHGTKGVVSRYGVKRLP--RKTHRGLRKVACIGAW-HPARVQFQ 260 Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKR 186 G+ G T +N ++ + K+ Sbjct: 261 VPRHGQKGYFHRTERNKKIYRIGLKK 286 >gi|168040500|ref|XP_001772732.1| predicted protein [Physcomitrella patens subsp. patens] gi|168040502|ref|XP_001772733.1| predicted protein [Physcomitrella patens subsp. patens] gi|162675957|gb|EDQ62446.1| predicted protein [Physcomitrella patens subsp. patens] gi|162675958|gb|EDQ62447.1| predicted protein [Physcomitrella patens subsp. patens] Length = 392 Score = 49.4 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 48/147 (32%), Gaps = 36/147 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++D+ G+T G G+ G + R L R G P RV Sbjct: 210 SVFRKDEMIDIIGVTRGHGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARVSFT 266 Query: 161 KKMAGRMGGNRVTVKNLEVVSV--------------------------------DDKRGL 188 AG+ G + T N +V V + Sbjct: 267 VARAGQNGYHHRTEMNKKVYKVGKVADKQSFSASTEFDVTEKEITPMGGFAHYGIVREDY 326 Query: 189 ILVKGCVPGAKKNSWILVRDSFKSAVN 215 +++KG V G KK I +R S V+ Sbjct: 327 LMIKGGVMGPKKR-VITLRQSLYKQVS 352 >gi|156081997|ref|XP_001608491.1| ribosomal protein L3 [Plasmodium vivax SaI-1] gi|148801062|gb|EDL42467.1| ribosomal protein L3, putative [Plasmodium vivax] Length = 386 Score = 49.4 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 3/86 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++DV +T G G G + R+ L R G P RV Sbjct: 204 NVFNTNEMIDVISVTKGHGTKGVVSRYGVKRLP--RKTHRGLRKVACIGAW-HPARVQFQ 260 Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKR 186 G+ G T +N ++ + K+ Sbjct: 261 VPRHGQKGYFHRTERNKKIYRIGLKK 286 >gi|226480232|emb|CAX78780.1| ribosomal protein L3 [Schistosoma japonicum] Length = 252 Score = 49.4 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F+ +++DV G+T GKGF G R + L R G P RV ++ Sbjct: 42 NVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVARS 98 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G T N ++ + Sbjct: 99 VARAGQKGYFHRTELNKKIYRI 120 >gi|213403598|ref|XP_002172571.1| 60S ribosomal protein L3-A [Schizosaccharomyces japonicus yFS275] gi|213406091|ref|XP_002173817.1| 60S ribosomal protein L3-A [Schizosaccharomyces japonicus yFS275] gi|212000618|gb|EEB06278.1| 60S ribosomal protein L3-A [Schizosaccharomyces japonicus yFS275] gi|212001864|gb|EEB07524.1| 60S ribosomal protein L3-A [Schizosaccharomyces japonicus yFS275] Length = 388 Score = 49.4 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 36/130 (27%), Gaps = 33/130 (25%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F ++VDV G+T GKG G R L R G P V Sbjct: 207 SVFEQNEIVDVIGITKGKGVEGVTTRWGTKRLP--RKTHRGLRKVACIGAW-HPSNVGWT 263 Query: 161 KKMAGRMGGNRVTVKNLEVVSVD------------------------------DKRGLIL 190 AG G T N ++ + + ++ Sbjct: 264 VARAGNNGYMHRTQLNSKIYRIGSGDDAKNGATDFDATEKRITPMGGFVRYGSVENDYVM 323 Query: 191 VKGCVPGAKK 200 + G PG K Sbjct: 324 LNGATPGPVK 333 >gi|158291770|ref|XP_313303.4| AGAP003556-PA [Anopheles gambiae str. PEST] gi|157017447|gb|EAA08849.4| AGAP003556-PA [Anopheles gambiae str. PEST] Length = 417 Score = 49.4 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 3/80 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F+ +++D +T GKGF G R + L R G P RV Sbjct: 210 VFSQDEMIDCVAVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVAFTV 266 Query: 162 KMAGRMGGNRVTVKNLEVVS 181 AG+ G + T N ++ Sbjct: 267 ARAGQKGYHHRTELNKKIYR 286 >gi|148232513|ref|NP_001087574.1| MGC84749 protein [Xenopus laevis] gi|51261715|gb|AAH80121.1| MGC84749 protein [Xenopus laevis] Length = 420 Score = 49.0 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++DV G+T GKGF G R + L R G P RV Sbjct: 209 NVFAQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGSW-HPARVGST 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G T N ++ + Sbjct: 266 VARAGQKGYFHRTELNKKIYRI 287 >gi|58260576|ref|XP_567698.1| large subunit ribosomal protein L3 [Cryptococcus neoformans var. neoformans JEC21] gi|134117057|ref|XP_772755.1| hypothetical protein CNBK1290 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255373|gb|EAL18108.1| hypothetical protein CNBK1290 [Cryptococcus neoformans var. neoformans B-3501A] gi|57229779|gb|AAW46181.1| large subunit ribosomal protein L3, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 390 Score = 49.0 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 29/82 (35%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F + +D+ G+T G G+ G R L R G +F Sbjct: 208 SVFEQDECIDIIGVTKGHGYEGVTARWGTTRLP--RKTHRGLRKVACIGAWHPSNVMFS- 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 265 VARAGQRGYHSRTSMNHKIYRI 286 >gi|149585070|ref|XP_001514408.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 506 Score = 49.0 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 3/88 (3%) Query: 95 GSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP 154 V + F +++DV G+T GKG+ G R + L R G P Sbjct: 306 QQVPVATVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HP 362 Query: 155 GRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 RV + AG+ G + T N ++ + Sbjct: 363 ARVAFSVARAGQKGYHHRTEINKKIYKI 390 >gi|188529359|gb|ACD62425.1| ribosomal protein L3 [Drosophila silvestris] Length = 207 Score = 49.0 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F ++VD G+T GKGF G R + L R G P RV Sbjct: 41 NVFGQDEMVDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVXCIGAW-HPSRVSTT 97 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 98 VARAGQKGYHHRTEINKKIYRI 119 >gi|56462226|gb|AAV91396.1| ribosomal protein 24 [Lonomia obliqua] Length = 280 Score = 48.6 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 3/80 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++D G+T GKG+ G R + L R G P RV Sbjct: 77 VFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFTV 133 Query: 162 KMAGRMGGNRVTVKNLEVVS 181 AG+ G + T N ++ Sbjct: 134 ARAGQKGYHHRTEMNKKIYR 153 >gi|73973636|ref|XP_868306.1| PREDICTED: similar to 60S ribosomal protein L3 (L4) isoform 8 [Canis familiaris] Length = 390 Score = 48.6 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 8/106 (7%) Query: 77 KKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATH 136 K L E +V +PV VF +++DV G+T GKG+ G R + L Sbjct: 177 KAHLMEIQVNGGTQQVPVNQVFGQD-----EMIDVIGVTKGKGYKGVTSRWHTKKLP--R 229 Query: 137 GVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 R G P RV + AG+ G + T N ++ + Sbjct: 230 KTHRGLRKVACIGAW-HPARVAFSMARAGQKGYHHRTEINKKIYKI 274 >gi|313227808|emb|CBY22957.1| unnamed protein product [Oikopleura dioica] Length = 403 Score = 48.6 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F+ +++DV G+T G+G+ G R + L R G P RV + Sbjct: 211 VFSEAEMIDVIGITKGRGYHGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVAFSV 267 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 +G+ G + T N +V V Sbjct: 268 ARSGQKGYHHRTEINKKVYRV 288 >gi|318087096|gb|ADV40140.1| putative ribosomal protein L3 isoform A [Latrodectus hesperus] Length = 303 Score = 48.6 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKGF G R + L R G P RV Sbjct: 210 VFAQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFTV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYRI 287 >gi|225711234|gb|ACO11463.1| 60S ribosomal protein L3 [Caligus rogercresseyi] Length = 408 Score = 48.6 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S FT +++D G+T GKGF G R + L R G P R+ Sbjct: 209 SVFTKDEMIDTIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRIQFT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEINKKIYDI 287 >gi|156082902|ref|XP_001608935.1| ribosomal protein L3 [Babesia bovis T2Bo] gi|154796185|gb|EDO05367.1| ribosomal protein L3, putative [Babesia bovis] Length = 393 Score = 48.6 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 45/135 (33%), Gaps = 33/135 (24%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F ++VDV G+T G G G + R L R G P RV Sbjct: 205 AVFASNEMVDVLGVTKGHGMKGVISRFGVTRLP--RKTHRGLRKVACIGSW-HPARVQFQ 261 Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190 +G+ G T +N ++ + + K ++ Sbjct: 262 VPRSGQKGYFHRTERNKKIYRLGLGSNPRNASTDADLTEKQITPMGGFPHYGEVKDDFLM 321 Query: 191 VKGCVPGAKKNSWIL 205 +KGC+ G KK ++ Sbjct: 322 IKGCIVGTKKRPIVI 336 >gi|78190703|gb|ABB29673.1| ribosomal protein 3 large subunit [Leucosolenia sp. AR-2003] Length = 319 Score = 48.2 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKGF G R + L R G P RV + Sbjct: 155 VFGQDEMIDVIGVTRGKGFKGVTSRWHCKKLP--RKTHKGLRKVACIGAW-HPSRVQYSV 211 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N +V V Sbjct: 212 ARAGQKGYHHRTEVNKKVYRV 232 >gi|62083393|gb|AAX62421.1| ribosomal protein L3 [Lysiphlebus testaceipes] gi|62083395|gb|AAX62422.1| ribosomal protein L3 variant 1 [Lysiphlebus testaceipes] Length = 412 Score = 48.2 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++DV G+T GKG G R + L R G P RV Sbjct: 209 NVFAQDEMIDVIGVTKGKGTKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEMNKKIYRI 287 >gi|114686508|ref|XP_525601.2| PREDICTED: similar to ribosomal protein L3 [Pan troglodytes] Length = 474 Score = 48.2 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 281 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 337 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 338 ARAGQKGYHHRTEINKKIYKI 358 >gi|309268181|ref|XP_001475783.2| PREDICTED: 60S ribosomal protein L3-like [Mus musculus] Length = 403 Score = 48.2 bits (114), Expect = 7e-04, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHYRTEINKKIYKI 287 >gi|297716820|ref|XP_002834695.1| PREDICTED: 60S ribosomal protein L3-like [Pongo abelii] Length = 332 Score = 48.2 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 217 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 273 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 274 ARAGQKGYHHRTEINKKIYKI 294 >gi|311334502|emb|CBN08632.1| small nucleolar RNA, C/D box 43 [Microcosmus squamiger] Length = 404 Score = 48.2 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 3/83 (3%) Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159 F +++D+ G+T G G+ G R + L R G P RV Sbjct: 208 ADLFGQDEMIDIIGVTKGHGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVAF 264 Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182 + +G+ G + T N ++ V Sbjct: 265 SVARSGQKGYHHRTEINKKIYRV 287 >gi|84998982|ref|XP_954212.1| 60S ribosomal protein l3 [Theileria annulata] gi|65305210|emb|CAI73535.1| 60S ribosomal protein l3, putative [Theileria annulata] Length = 173 Score = 48.2 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 46/132 (34%), Gaps = 34/132 (25%) Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168 +DV G+T G G G + R+ L R G P RV G+ G Sbjct: 2 LDVLGVTKGHGVKGVVSRYGVTRLP--RKTHRGLRKVACIGSW-HPARVQFQVPRHGQKG 58 Query: 169 GNRVTVKNLEVVSV---DDKRG---------------------------LILVKGCVPGA 198 ++ T +N ++ + + R +++KGC+PG Sbjct: 59 YHKRTERNKKIYRIGLGNCNRNGSTDSDLTEKTITPMGGFPHYGVVREDFLMLKGCIPGT 118 Query: 199 KKNSWILVRDSF 210 KK I +R + Sbjct: 119 KKR-VITLRKTL 129 >gi|61740425|gb|AAX54475.1| ribosomal protein L3 [Lolium multiflorum] Length = 132 Score = 48.2 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 32/98 (32%), Gaps = 4/98 (4%) Query: 85 VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRS 144 V + F +++D+ G+T GKG+ R L R Sbjct: 19 VDYGYNFFEKEVPIDA-VFQKDEMIDIIGVTKGKGYRRCRTRWGVTRLP--RKTHRGLRK 75 Query: 145 HGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 G P RV AG+ G + T N +V + Sbjct: 76 VACIGAW-HPARVSYTVARAGQNGYHHRTEMNKKVYKI 112 >gi|114682524|ref|XP_001150138.1| PREDICTED: similar to ribosomal protein L3 [Pan troglodytes] Length = 458 Score = 48.2 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 273 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 329 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 330 ARAGQKGYHHRTEINKKIYKI 350 >gi|73973638|ref|XP_868310.1| PREDICTED: similar to 60S ribosomal protein L3 (L4) isoform 9 [Canis familiaris] Length = 331 Score = 47.8 bits (113), Expect = 9e-04, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSM 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287 >gi|224095133|ref|XP_002198398.1| PREDICTED: similar to ribosomal protein L3 [Taeniopygia guttata] Length = 403 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 3/88 (3%) Query: 95 GSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP 154 V + F +++DV G+T GKG+ G R + L R G P Sbjct: 203 QQVPVATVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HP 259 Query: 155 GRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 RV + AG+ G + T N ++ + Sbjct: 260 ARVAFSVARAGQKGYHHRTEINKKIYKI 287 >gi|47218047|emb|CAG11452.1| unnamed protein product [Tetraodon nigroviridis] Length = 388 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 44/137 (32%), Gaps = 25/137 (18%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++D+ G++ G GF G R + L R G P RV Sbjct: 208 AVFCQDEMIDIIGVSKGHGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGYT 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSV--------------------DDKRGLILVKGCVP--GA 198 AG+ G + T N ++ + D + I G P G Sbjct: 265 IARAGQKGYHHRTEINKKIFRIGKGVHIQDGKVIRNNASTSYDTSQKTITPMGGFPHYGE 324 Query: 199 KKNSWILVRDSFKSAVN 215 N +++V+ Sbjct: 325 VNNDFVMVKGCVVGPKK 341 >gi|213515418|ref|NP_001133147.1| ribosomal protein L3-like [Salmo salar] gi|197632147|gb|ACH70797.1| ribosomal protein L3-like [Salmo salar] Length = 409 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 49/156 (31%), Gaps = 41/156 (26%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV G+T G G G R L R G P RV Sbjct: 209 SVFYQDEMIDVIGVTKGHGMKGVTSRWGVKKLP--RKTHKGLRKVACIGAW-HPSRVGYT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV-------------------------------------D 183 AG+ G + T N ++ + D Sbjct: 266 IARAGQKGYHHRTELNKKIYRIGKGIHVQDGKVIKNNASTNYDTTQKTITPMGGFPHYGD 325 Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 K +++KGCV G +K + +R S + K K Sbjct: 326 VKNDFLMLKGCVIGCRKR-VLTLRKSMLVHTSRKSK 360 >gi|19115692|ref|NP_594780.1| 60S ribosomal protein L3 [Schizosaccharomyces pombe 972h-] gi|548771|sp|P36584|RL3B_SCHPO RecName: Full=60S ribosomal protein L3-B gi|5059|emb|CAA40901.1| ribosomal protein L3 [Schizosaccharomyces pombe] gi|13810236|emb|CAC37425.1| 60S ribosomal protein L3 [Schizosaccharomyces pombe] Length = 388 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 36/137 (26%), Gaps = 36/137 (26%) Query: 97 VFSPSY---FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153 + F +++DV G+T GKG G R L R G Sbjct: 200 EKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKRLP--RKTHRGLRKVACIGAW-H 256 Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD----------------------------- 184 P V AG G T N ++ + Sbjct: 257 PANVQWTVARAGNAGYMHRTQLNSKIYRIGAGDDAKNASTDFDATEKRITPMGGFVRYGV 316 Query: 185 -KRGLILVKGCVPGAKK 200 + +++ G PG K Sbjct: 317 VENDFVMLNGATPGPVK 333 >gi|148235098|ref|NP_001091345.1| hypothetical protein LOC100037184 [Xenopus laevis] gi|125858902|gb|AAI29593.1| LOC100037184 protein [Xenopus laevis] Length = 405 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 29/82 (35%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F + VD+ +T GKGF G R L+ R G F Sbjct: 214 SVFGQNENVDIIAVTKGKGFEGVTFRWGVKKLQ--RKTHRGLRKVACIGAWHPARVGFT- 270 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 271 VPRAGQNGYHHRTELNKKIYRI 292 >gi|19114383|ref|NP_593471.1| 60S ribosomal protein L3 [Schizosaccharomyces pombe 972h-] gi|730556|sp|P40372|RL3A_SCHPO RecName: Full=60S ribosomal protein L3-A gi|508856|gb|AAA19655.1| ribosomal protein L3 [Schizosaccharomyces pombe] gi|2370475|emb|CAB11503.1| 60S ribosomal protein L3 [Schizosaccharomyces pombe] Length = 388 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 36/137 (26%), Gaps = 36/137 (26%) Query: 97 VFSPSY---FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153 + F +++DV G+T GKG G R L R G Sbjct: 200 EKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKRLP--RKTHRGLRKVACIGAW-H 256 Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD----------------------------- 184 P V AG G T N ++ + Sbjct: 257 PANVQWTVARAGNAGYMHRTQLNSKIYRIGAGDDAKNASTDFDATEKRITPMGGFVRYGV 316 Query: 185 -KRGLILVKGCVPGAKK 200 + +++ G PG K Sbjct: 317 VENDFVMLNGATPGPVK 333 >gi|290991133|ref|XP_002678190.1| ribosomal protein L3 [Naegleria gruberi] gi|284091801|gb|EFC45446.1| ribosomal protein L3 [Naegleria gruberi] Length = 416 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 27/82 (32%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F + +DV ++ GKG G + R L R G F Sbjct: 210 SVFAKDEPIDVIAVSKGKGTKGVVSRWGVRRLP--RKTHRGLRKVACIGAWHPARVSFS- 266 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G +N ++ + Sbjct: 267 VARAGQKGFFHRVHQNKKIYRI 288 >gi|114610091|ref|XP_001143080.1| PREDICTED: hypothetical protein [Pan troglodytes] Length = 462 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 269 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKNLP--RKTHQGLRKVACIGAW-HPARVAFSV 325 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 326 ARAGQKGYHHRTEINKKIYKI 346 >gi|221116204|ref|XP_002167181.1| PREDICTED: similar to Ribosomal protein L3 CG4863-PA [Hydra magnipapillata] gi|221117552|ref|XP_002159678.1| PREDICTED: similar to ribosomal protein L3e [Hydra magnipapillata] Length = 403 Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 46/156 (29%), Gaps = 41/156 (26%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++D G+T G GF G R L R G F Sbjct: 209 NVFGQDEMIDAIGITKGHGFKGVTYRWGTKKLP--RKTHKGLRKVACVGAWHPARIGFT- 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSVD----------DKRG----------------------- 187 AG+ G + +N ++ + K Sbjct: 266 VPRAGQCGYHHRVERNKKIYRIGRGIHTKDNKVVKNNASTDYDLTEKTITPMGGFPHYGE 325 Query: 188 ----LILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219 +++KG +PG KK I +R S + + K Sbjct: 326 VTEDFLMLKGAIPGPKKR-VISLRKSLLAQTSRKAN 360 >gi|126339540|ref|XP_001366844.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 476 Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 283 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 339 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 340 ARAGQKGYHHRTEINKKIYKI 360 >gi|225706512|gb|ACO09102.1| 60S ribosomal protein L3 [Osmerus mordax] Length = 403 Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 3/83 (3%) Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159 + FT +++DV G+T G G+ G R + L R G P RV Sbjct: 208 ANVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAF 264 Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182 + AG+ G + T N ++ + Sbjct: 265 SVARAGQKGYHHRTEINKKIYKI 287 >gi|326911917|ref|XP_003202302.1| PREDICTED: 60S ribosomal protein L3-like [Meleagris gallopavo] Length = 403 Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 209 SVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFS 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEINKKIYKI 287 >gi|57525400|ref|NP_001006241.1| 60S ribosomal protein L3 [Gallus gallus] gi|53132964|emb|CAG31951.1| hypothetical protein RCJMB04_14e22 [Gallus gallus] Length = 403 Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 209 SVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFS 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEINKKIYKI 287 >gi|148228673|ref|NP_001080341.1| ribosomal protein L3 [Xenopus laevis] gi|27769202|gb|AAH42242.1| Rpl3-prov protein [Xenopus laevis] Length = 403 Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 3/88 (3%) Query: 95 GSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP 154 V F +++DV G+T GKG+ G R + L R G P Sbjct: 203 QQVVIGGVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HP 259 Query: 155 GRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 RV + AG+ G + T N ++ + Sbjct: 260 ARVAFSVARAGQKGYHHRTEINKKIYKI 287 >gi|57094678|ref|XP_532246.1| PREDICTED: similar to 60S ribosomal protein L3 (L4) isoform 1 [Canis familiaris] Length = 403 Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSM 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287 >gi|119580719|gb|EAW60315.1| ribosomal protein L3, isoform CRA_f [Homo sapiens] Length = 430 Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 237 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 293 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 294 ARAGQKGYHHRTEINKKIYKI 314 >gi|73973634|ref|XP_868301.1| PREDICTED: similar to 60S ribosomal protein L3 (L4) isoform 7 [Canis familiaris] Length = 305 Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 112 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSM 168 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 169 ARAGQKGYHHRTEINKKIYKI 189 >gi|119580717|gb|EAW60313.1| ribosomal protein L3, isoform CRA_d [Homo sapiens] Length = 429 Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 236 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 292 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 293 ARAGQKGYHHRTEINKKIYKI 313 >gi|118120333|ref|XP_001234708.1| PREDICTED: hypothetical protein, partial [Gallus gallus] Length = 236 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 42 SVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFS 98 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 99 VARAGQKGYHHRTEINKKIYKI 120 >gi|73973628|ref|XP_868292.1| PREDICTED: similar to 60S ribosomal protein L3 (L4) isoform 4 [Canis familiaris] Length = 302 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 109 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSM 165 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 166 ARAGQKGYHHRTEINKKIYKI 186 >gi|294954638|ref|XP_002788244.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983] gi|239903507|gb|EER20040.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983] Length = 385 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F ++VD+ G+T G G + R L R G P RV Sbjct: 201 SVFDKDEMVDIIGVTKGHGNTSVTTRWGVTRL--ARKTHRGLRKVACIGAW-HPARVQFQ 257 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+MG + N ++ + Sbjct: 258 VPRAGQMGYHHRVEINKKIYRI 279 >gi|294867277|ref|XP_002765039.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983] gi|239864919|gb|EEQ97756.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983] Length = 385 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F ++VD+ G+T G G + R L R G P RV Sbjct: 201 SVFDKDEMVDIIGVTKGHGNTSVTTRWGVTRL--ARKTHRGLRKVACIGAW-HPARVQFQ 257 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+MG + N ++ + Sbjct: 258 VPRAGQMGYHHRVEINKKIYRI 279 >gi|198138918|gb|ACH81777.1| ribosomal protein L3 [Artemia franciscana] Length = 194 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 29/76 (38%), Gaps = 3/76 (3%) Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166 + +DV G T GKG+ G R + L R G P RV AG+ Sbjct: 2 ENIDVIGTTKGKGYKGVTSRWHTRKLP--RKTHKGLRKVACIGAW-HPSRVKFTVARAGQ 58 Query: 167 MGGNRVTVKNLEVVSV 182 G + T N ++ + Sbjct: 59 KGYHHRTEMNKKIYRI 74 >gi|13517923|gb|AAK29057.1|AF346004_1 L3 ribosomal protein [Lolium perenne] Length = 220 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 36/101 (35%), Gaps = 10/101 (9%) Query: 85 VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHR- 143 V + F +++D+ G+T GKG+ G + R L +HR Sbjct: 26 VDYGYNFFEKEVPIDA-VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR-----KTHRG 79 Query: 144 --SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 G P RV AG+ G + T N +V + Sbjct: 80 LPKVACIGAW-HPARVSYTVARAGQNGYHHRTEMNKKVYKI 119 >gi|326437430|gb|EGD83000.1| 60S ribosomal protein L3 [Salpingoeca sp. ATCC 50818] Length = 398 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 37/100 (37%), Gaps = 8/100 (8%) Query: 83 FRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISH 142 F + +PVG+V F + +DV G + G+GF G R L Sbjct: 196 FAKGLLEQDIPVGTV-----FVQDENIDVLGASKGRGFEGVTHRWGTKRLP--RKTHKGL 248 Query: 143 RSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182 R G P V + AG+ G + T N ++ V Sbjct: 249 RKVACIGAW-HPANVQYSVARAGQNGYHHRTEMNKKIYMV 287 >gi|48257062|gb|AAH04323.2| RPL3 protein [Homo sapiens] Length = 292 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 99 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 155 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 156 ARAGQKGYHHRTEINKKIYKI 176 >gi|209732474|gb|ACI67106.1| 60S ribosomal protein L3 [Salmo salar] Length = 403 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + FT +++DV G+T G G+ G R + L R G P RV + Sbjct: 209 NVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPSRVAFS 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEINKKIYKI 287 >gi|213510850|ref|NP_001135078.1| 60S ribosomal protein L3 [Salmo salar] gi|209731890|gb|ACI66814.1| 60S ribosomal protein L3 [Salmo salar] gi|209738508|gb|ACI70123.1| 60S ribosomal protein L3 [Salmo salar] gi|209738636|gb|ACI70187.1| 60S ribosomal protein L3 [Salmo salar] gi|223646872|gb|ACN10194.1| 60S ribosomal protein L3 [Salmo salar] gi|223672733|gb|ACN12548.1| 60S ribosomal protein L3 [Salmo salar] Length = 403 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + FT +++DV G+T G G+ G R + L R G P RV + Sbjct: 209 NVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPSRVAFS 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEINKKIYKI 287 >gi|7159574|emb|CAB76199.1| ribosomal protein L3 [Bos taurus] Length = 403 Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287 >gi|14250148|gb|AAH08492.1| Ribosomal protein L3 [Homo sapiens] Length = 403 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287 >gi|209734892|gb|ACI68315.1| 60S ribosomal protein L3 [Salmo salar] gi|209738572|gb|ACI70155.1| 60S ribosomal protein L3 [Salmo salar] Length = 403 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + FT +++DV G+T G G+ G R + L R G P RV + Sbjct: 209 NVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPSRVAFS 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEINKKIYKI 287 >gi|132956|sp|P27659|RL3_MOUSE RecName: Full=60S ribosomal protein L3; AltName: Full=J1 protein gi|52741|emb|CAA68370.1| J1 protein [Mus musculus] gi|226725|prf||1604248A J1 protein Length = 403 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFTV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287 >gi|148697895|gb|EDL29842.1| mCG129893 [Mus musculus] Length = 358 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 165 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 221 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 222 ARAGQKGYHHRTEINKKIYKI 242 >gi|294917113|ref|XP_002778404.1| ribosomal protein L3, putative [Perkinsus marinus ATCC 50983] gi|239886795|gb|EER10199.1| ribosomal protein L3, putative [Perkinsus marinus ATCC 50983] Length = 230 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F ++VD+ G+T G G + R L R G P RV Sbjct: 46 SVFDKDEMVDIIGVTKGHGNTSVTTRWGVTRL--ARKTHRGLRKVACIGAW-HPARVQFQ 102 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+MG + N ++ + Sbjct: 103 VPRAGQMGYHHRVEINKKIYRI 124 >gi|154426164|gb|AAI51556.1| Ribosomal protein L3 [Bos taurus] Length = 403 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287 >gi|18606060|gb|AAH22790.1| Unknown (protein for IMAGE:3538792) [Homo sapiens] Length = 374 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 181 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 237 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 238 ARAGQKGYHHRTEINKKIYKI 258 >gi|47217938|emb|CAG02221.1| unnamed protein product [Tetraodon nigroviridis] Length = 402 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T G G+ G R + L R G P RV + Sbjct: 209 VFAQDEMIDVIGVTKGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 265 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 ARAGQKGYHHRTEINKKIYKI 286 >gi|291389862|ref|XP_002711434.1| PREDICTED: ribosomal protein L3-like [Oryctolagus cuniculus] Length = 403 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287 >gi|60654345|gb|AAX29863.1| ribosomal protein L3 [synthetic construct] Length = 404 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287 >gi|337580|gb|AAA60291.1| ribosomal protein L3 [Homo sapiens] Length = 398 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 205 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 261 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 262 ARAGQKGYHHRTEINKKIYKI 282 >gi|73969067|ref|XP_859944.1| PREDICTED: similar to 60S ribosomal protein L3 (L4) isoform 8 [Canis familiaris] Length = 320 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 127 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 183 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 184 ARAGQKGYHHRTEINKKIYKI 204 >gi|27807287|ref|NP_777140.1| 60S ribosomal protein L3 [Bos taurus] gi|730564|sp|P39872|RL3_BOVIN RecName: Full=60S ribosomal protein L3 gi|187609300|pdb|2ZKR|BB Chain b, Structure Of A Mammalian Ribosomal 60s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map gi|450499|emb|CAA82654.1| ribosomal protein L3 [Bos taurus] gi|59858389|gb|AAX09029.1| ribosomal protein L3 [Bos taurus] gi|74267942|gb|AAI02254.1| Ribosomal protein L3 [Bos taurus] gi|296486985|gb|DAA29098.1| 60S ribosomal protein L3 [Bos taurus] gi|1092507|prf||2024221A ribosomal protein L3 Length = 403 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287 >gi|74191638|dbj|BAE30390.1| unnamed protein product [Mus musculus] gi|74198856|dbj|BAE30653.1| unnamed protein product [Mus musculus] Length = 403 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287 >gi|74186276|dbj|BAE42921.1| unnamed protein product [Mus musculus] Length = 403 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287 >gi|296236921|ref|XP_002763538.1| PREDICTED: 60S ribosomal protein L3-like isoform 1 [Callithrix jacchus] Length = 403 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287 >gi|233957366|gb|ACQ91223.1| ribosomal protein L3 [Penaeus monodon] Length = 406 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV G+T GKG G R L R G P RV Sbjct: 209 SVFAQDEMIDVIGVTKGKGMKGVTSRWGTKKLP--RKTHKGLRKVACIGAW-HPTRVQFT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T + ++ + Sbjct: 266 VARAGQKGYHHRTERTKKIYRI 287 >gi|94404874|ref|XP_982298.1| PREDICTED: 60S ribosomal protein L3-like [Mus musculus] Length = 385 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 192 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 248 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 249 ARAGQKGYHHRTEINKKIYKI 269 >gi|74181618|dbj|BAE30074.1| unnamed protein product [Mus musculus] Length = 403 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287 >gi|38454246|ref|NP_942048.1| 60S ribosomal protein L3 [Rattus norvegicus] gi|132958|sp|P21531|RL3_RAT RecName: Full=60S ribosomal protein L3; AltName: Full=L4 gi|57698|emb|CAA44095.1| ribosomal protein L3 [Rattus rattus] gi|37231753|gb|AAH58494.1| Ribosomal protein L3 [Rattus norvegicus] gi|149065896|gb|EDM15769.1| ribosomal protein L3, isoform CRA_b [Rattus norvegicus] Length = 403 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287 >gi|255308899|ref|NP_038790.2| 60S ribosomal protein L3 [Mus musculus] gi|16307136|gb|AAH09655.1| Ribosomal protein L3 [Mus musculus] gi|26354122|dbj|BAC40691.1| unnamed protein product [Mus musculus] gi|53237049|gb|AAH83134.1| Ribosomal protein L3 [Mus musculus] gi|62825867|gb|AAH94059.1| Ribosomal protein L3 [Mus musculus] gi|74138821|dbj|BAE27217.1| unnamed protein product [Mus musculus] gi|74139413|dbj|BAE40848.1| unnamed protein product [Mus musculus] gi|74141867|dbj|BAE41003.1| unnamed protein product [Mus musculus] gi|74142025|dbj|BAE41075.1| unnamed protein product [Mus musculus] gi|74146286|dbj|BAE28917.1| unnamed protein product [Mus musculus] gi|74151280|dbj|BAE38773.1| unnamed protein product [Mus musculus] gi|74184852|dbj|BAE39049.1| unnamed protein product [Mus musculus] gi|74190533|dbj|BAE25922.1| unnamed protein product [Mus musculus] gi|74195956|dbj|BAE30536.1| unnamed protein product [Mus musculus] gi|74198689|dbj|BAE39818.1| unnamed protein product [Mus musculus] gi|74201222|dbj|BAE26078.1| unnamed protein product [Mus musculus] gi|74204394|dbj|BAE39950.1| unnamed protein product [Mus musculus] gi|74207543|dbj|BAE40022.1| unnamed protein product [Mus musculus] gi|74207577|dbj|BAE40037.1| unnamed protein product [Mus musculus] gi|74207702|dbj|BAE40095.1| unnamed protein product [Mus musculus] gi|74207706|dbj|BAE40097.1| unnamed protein product [Mus musculus] gi|74212023|dbj|BAE40178.1| unnamed protein product [Mus musculus] gi|74220011|dbj|BAE40585.1| unnamed protein product [Mus musculus] gi|74221090|dbj|BAE42051.1| unnamed protein product [Mus musculus] gi|148672669|gb|EDL04616.1| mCG11520, isoform CRA_b [Mus musculus] gi|187956900|gb|AAI58040.1| Ribosomal protein L3 [Mus musculus] Length = 403 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287 >gi|4506649|ref|NP_000958.1| 60S ribosomal protein L3 isoform a [Homo sapiens] gi|302148475|ref|NP_001180483.1| ribosomal protein L3 [Macaca mulatta] gi|297708927|ref|XP_002831202.1| PREDICTED: 60S ribosomal protein L3-like [Pongo abelii] gi|730565|sp|P39023|RL3_HUMAN RecName: Full=60S ribosomal protein L3; AltName: Full=HIV-1 TAR RNA-binding protein B; Short=TARBP-B gi|313659|emb|CAA51839.1| ribosomal protein L3 [Homo sapiens] gi|3850177|emb|CAA18450.1| ribosomal protein L3 [Homo sapiens] gi|12803201|gb|AAH02408.1| Ribosomal protein L3 [Homo sapiens] gi|13623709|gb|AAH06483.1| Ribosomal protein L3, isoform a [Homo sapiens] gi|14124954|gb|AAH08003.1| Ribosomal protein L3 [Homo sapiens] gi|15082461|gb|AAH12146.1| Ribosomal protein L3 [Homo sapiens] gi|15215372|gb|AAH12786.1| Ribosomal protein L3 [Homo sapiens] gi|15489128|gb|AAH13674.1| Ribosomal protein L3 [Homo sapiens] gi|15559314|gb|AAH14017.1| Ribosomal protein L3 [Homo sapiens] gi|15929157|gb|AAH15032.1| Ribosomal protein L3, isoform a [Homo sapiens] gi|16041773|gb|AAH15767.1| Ribosomal protein L3 [Homo sapiens] gi|21104408|dbj|BAB93474.1| ribosomal protein L3 [Homo sapiens] gi|39794638|gb|AAH63662.1| Ribosomal protein L3 [Homo sapiens] gi|47678663|emb|CAG30452.1| RPL3 [Homo sapiens] gi|56972440|gb|AAH88373.1| Ribosomal protein L3 [Homo sapiens] gi|78395076|gb|AAI07712.1| Ribosomal protein L3 [Homo sapiens] gi|90075246|dbj|BAE87303.1| unnamed protein product [Macaca fascicularis] gi|90076620|dbj|BAE87990.1| unnamed protein product [Macaca fascicularis] gi|90076640|dbj|BAE88000.1| unnamed protein product [Macaca fascicularis] gi|109451472|emb|CAK54597.1| RPL3 [synthetic construct] gi|109452068|emb|CAK54896.1| RPL3 [synthetic construct] gi|119580714|gb|EAW60310.1| ribosomal protein L3, isoform CRA_a [Homo sapiens] gi|189055072|dbj|BAG38056.1| unnamed protein product [Homo sapiens] gi|261859736|dbj|BAI46390.1| ribosomal protein L3 [synthetic construct] Length = 403 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287 >gi|226480224|emb|CAX78776.1| ribosomal protein L3 [Schistosoma japonicum] Length = 419 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F+ +++DV G+T GKGF G R + L R G P RV ++ Sbjct: 209 NVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVARS 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ T N ++ + Sbjct: 266 VARAGQKSYFHRTELNKKIYRI 287 >gi|149743311|ref|XP_001501957.1| PREDICTED: ribosomal protein L3 [Equus caballus] Length = 403 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287 >gi|73969069|ref|XP_531732.2| PREDICTED: similar to 60S ribosomal protein L3 (L4) isoform 2 [Canis familiaris] Length = 403 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287 >gi|187607061|ref|NP_001120075.1| ribosomal protein L3 [Xenopus (Silurana) tropicalis] gi|165970448|gb|AAI58280.1| LOC100145083 protein [Xenopus (Silurana) tropicalis] gi|165971389|gb|AAI58514.1| LOC100145083 protein [Xenopus (Silurana) tropicalis] Length = 403 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287 >gi|297296032|ref|XP_001082799.2| PREDICTED: 60S ribosomal protein L3-like isoform 1 [Macaca mulatta] Length = 403 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287 >gi|281351162|gb|EFB26746.1| hypothetical protein PANDA_002530 [Ailuropoda melanoleuca] Length = 403 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ V Sbjct: 267 ARAGQKGYHHRTEINKKIYKV 287 >gi|327239268|gb|AEA39501.1| ribosomal protein L3 [Ailuropoda melanoleuca] gi|327239370|gb|AEA39552.1| ribosomal protein L3 [Ailuropoda melanoleuca] Length = 403 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ V Sbjct: 267 ARAGQKGYHHRTEINKKIYKV 287 >gi|301757551|ref|XP_002914602.1| PREDICTED: 60S ribosomal protein L3-like [Ailuropoda melanoleuca] Length = 403 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ V Sbjct: 267 ARAGQKGYHHRTEINKKIYKV 287 >gi|7159730|emb|CAB76201.1| ribosomal protein L3 [Homo sapiens] Length = 343 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 155 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 211 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 212 ARAGQKGYHHRTEINKKIYKI 232 >gi|74185347|dbj|BAE30149.1| unnamed protein product [Mus musculus] Length = 403 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287 >gi|119580718|gb|EAW60314.1| ribosomal protein L3, isoform CRA_e [Homo sapiens] gi|119580723|gb|EAW60319.1| ribosomal protein L3, isoform CRA_e [Homo sapiens] Length = 351 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 158 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 214 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 215 ARAGQKGYHHRTEINKKIYKI 235 >gi|71296875|gb|AAH36582.1| RPL3 protein [Homo sapiens] gi|119580715|gb|EAW60311.1| ribosomal protein L3, isoform CRA_b [Homo sapiens] gi|119580721|gb|EAW60317.1| ribosomal protein L3, isoform CRA_b [Homo sapiens] Length = 251 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 58 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 114 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 115 ARAGQKGYHHRTEINKKIYKI 135 >gi|319079393|ref|NP_001187033.1| ribosomal protein L3 [Ictalurus punctatus] gi|15293867|gb|AAK95126.1|AF401554_1 ribosomal protein L3 [Ictalurus punctatus] Length = 402 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F+ +++DV G+T G G+ G R + L R G P RV + Sbjct: 208 NVFSQDEMIDVIGVTKGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFS 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 265 VARAGQKGYHHRTEVNKKIYKI 286 >gi|327272509|ref|XP_003221027.1| PREDICTED: 60S ribosomal protein L3-like [Anolis carolinensis] Length = 403 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287 >gi|73969057|ref|XP_859775.1| PREDICTED: similar to ribosomal protein L3 isoform 3 [Canis familiaris] gi|73969059|ref|XP_859808.1| PREDICTED: similar to ribosomal protein L3 isoform 4 [Canis familiaris] gi|73969065|ref|XP_859912.1| PREDICTED: similar to ribosomal protein L3 isoform 7 [Canis familiaris] Length = 251 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 58 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 114 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 115 ARAGQKGYHHRTEINKKIYKI 135 >gi|308323287|gb|ADO28780.1| 60S ribosomal protein l3 [Ictalurus punctatus] Length = 403 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F+ +++DV G+T G G+ G R + L R G P RV + Sbjct: 209 NVFSQDEMIDVIGVTKGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFS 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEVNKKIYKI 287 >gi|114608746|ref|XP_518669.2| PREDICTED: similar to ribosomal protein L3 [Pan troglodytes] Length = 383 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 210 VFGKDEMIDVIGVTKGKGYKGVTSRWHTKKLPRE--THRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G T N ++ + Sbjct: 267 ARAGQKGYRHRTEINKKIYKI 287 >gi|75076108|sp|Q4R5Q0|RL3_MACFA RecName: Full=60S ribosomal protein L3 gi|67970465|dbj|BAE01575.1| unnamed protein product [Macaca fascicularis] Length = 403 Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G R P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAR-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287 >gi|22203712|gb|AAM94270.1| ribosomal protein L3 [Chlamys farreri] Length = 396 Score = 46.3 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 46/127 (36%), Gaps = 15/127 (11%) Query: 62 SKPMRGFFSSV-------NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGM 114 +K M+ N + ++ +K + +PVG S F + + +D+ G+ Sbjct: 169 TKLMKKRQKKAHIMEIQVNGGTIAQKVDWAREKMESSVPVG-----SVFAMDENIDIIGV 223 Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 T GKG G R + L R G P RV AG+ G + T Sbjct: 224 TKGKGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFTVARAGQKGYHHRTE 280 Query: 175 KNLEVVS 181 N ++ Sbjct: 281 INEKIYR 287 >gi|198285589|gb|ACH85333.1| ribosomal protein L3-like [Salmo salar] Length = 251 Score = 46.3 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + FT +++DV G+T G G+ G R + L R G P RV + Sbjct: 57 NVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPSRVAFS 113 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 114 VARAGQKGYHHRTEINKKIYKI 135 >gi|237862632|gb|ACR24941.1| ribosomal protein L3 [Lepidochitona cinerea] Length = 351 Score = 46.3 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 3/81 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 F +L+D+ G+T GKG G R + L R G P RV + Sbjct: 186 EVFAQDELIDIIGVTKGKGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQYS 242 Query: 161 KKMAGRMGGNRVTVKNLEVVS 181 AG+ G + T N ++ Sbjct: 243 VARAGQKGYHHRTEINKKIYR 263 >gi|164605513|dbj|BAF98579.1| ribosomal protein L3 [Solea senegalensis] Length = 403 Score = 46.3 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 FT +++DV G+T G G+ G R + L R G P RV + Sbjct: 210 VFTQDEMIDVIGVTKGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287 >gi|3914741|sp|Q29293|RL3_PIG RecName: Full=60S ribosomal protein L3 Length = 130 Score = 46.3 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 30/81 (37%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G F Sbjct: 7 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAWHPARXAFS-V 63 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 64 ARAGQKGYHHRTEINKKIYKI 84 >gi|156359545|ref|XP_001624828.1| predicted protein [Nematostella vectensis] gi|156211630|gb|EDO32728.1| predicted protein [Nematostella vectensis] Length = 94 Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 29/81 (35%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F+ +++DV G+T G GF G R L R G F Sbjct: 5 VFSPDEMIDVIGVTKGHGFKGVTYRWGTKKLP--RKTHKGLRKVACIGAWHPARVSFS-V 61 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 62 ARAGQAGYHHRTELNKKIYRI 82 >gi|326929147|ref|XP_003210731.1| PREDICTED: 60S ribosomal protein L3-like [Meleagris gallopavo] Length = 407 Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F+ +++DV G+T G G G R + L R G P RV + Sbjct: 209 SVFSQNEMIDVIGVTKGHGMKGVTSRWHSKKLP--RKTHKGLRKVACIGAW-HPARVGYS 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTELNKKIFRI 287 >gi|22758910|gb|AAN05614.1| ribosomal protein L3 [Argopecten irradians] Length = 254 Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 46/133 (34%), Gaps = 15/133 (11%) Query: 56 AKVKNVSKPMRGFFSSV-------NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQL 108 +K ++ N + ++ +K + +PVG S F + + Sbjct: 15 RYAHTQTKLLKKRQKKAHIMEIQVNGGTISQKVDWAREKMESSVPVG-----SVFAMDEN 69 Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168 +D+ G+T GKG G R + L R G P RV AG+ G Sbjct: 70 IDIIGVTKGKGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFTVARAGQKG 126 Query: 169 GNRVTVKNLEVVS 181 + T N ++ Sbjct: 127 YHHRTEINKKIYR 139 >gi|50755665|ref|XP_414843.1| PREDICTED: similar to MGC108366 protein [Gallus gallus] Length = 407 Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F+ +++DV G+T G G G R + L R G P RV + Sbjct: 209 SVFSQNEMIDVIGVTKGHGMKGVTSRWHSKKLP--RKTHKGLRKVACIGAW-HPARVGYS 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTELNKKIFRI 287 >gi|148223643|ref|NP_001088030.1| ribosomal protein L3-like [Xenopus laevis] gi|52221158|gb|AAH82692.1| LOC494722 protein [Xenopus laevis] Length = 407 Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG G R + L R G P RV Sbjct: 210 VFCQDEMIDVIGVTKGKGVRGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVAYTI 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYRI 287 >gi|71896067|ref|NP_001025612.1| ribosomal protein L3-like [Xenopus (Silurana) tropicalis] gi|60688143|gb|AAH91070.1| MGC108366 protein [Xenopus (Silurana) tropicalis] Length = 407 Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F +++DV G+T GKG G R + L R G P RV Sbjct: 209 SVFGQDEMIDVIGVTKGKGVRGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVAYT 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 IARAGQKGYHHRTEINKKIYRI 287 >gi|327287585|ref|XP_003228509.1| PREDICTED: 60S ribosomal protein L3-like [Anolis carolinensis] Length = 399 Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F+ +++DV G+T G G G R + L R G P RV + Sbjct: 201 SVFSQSEMIDVIGVTKGHGMKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGYS 257 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 258 IARAGQKGYHHRTELNKKIYRI 279 >gi|110456408|gb|ABG74707.1| putative ribosomal protein L3e [Diaphorina citri] Length = 201 Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 27/73 (36%), Gaps = 3/73 (4%) Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168 +D G+T GKGF G R + L R G P RV AG+ G Sbjct: 2 IDCIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFTVARAGQKG 58 Query: 169 GNRVTVKNLEVVS 181 + T N ++ Sbjct: 59 YHHRTELNKKIYR 71 >gi|301769703|ref|XP_002920231.1| PREDICTED: 60S ribosomal protein L3-like [Ailuropoda melanoleuca] Length = 444 Score = 45.5 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F+ +++DV +T G+G G R + L R G P RV + Sbjct: 246 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 302 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 303 IARAGQKGYHHRTELNKKIYRI 324 >gi|296219367|ref|XP_002755828.1| PREDICTED: 60S ribosomal protein L3-like [Callithrix jacchus] Length = 424 Score = 45.5 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F+ +++DV +T G+G G R + L R G P RV + Sbjct: 226 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 282 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 283 IARAGQKGYHHRTELNKKIYRI 304 >gi|48597014|ref|NP_001001590.1| 60S ribosomal protein L3 [Danio rerio] gi|45504885|gb|AAS66967.1| ribosomal protein L3 [Danio rerio] Length = 403 Score = 45.5 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 3/83 (3%) Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159 + F+ +++DV G+T G G G R + L R G P RV Sbjct: 208 ANVFSQDEMIDVIGVTKGHGCKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAF 264 Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182 + AG+ G + T N ++ + Sbjct: 265 SVARAGQKGYHHRTEINKKIYKI 287 >gi|78369254|ref|NP_001030578.1| 60S ribosomal protein L3-like [Bos taurus] gi|88932612|sp|Q3SZ10|RL3L_BOVIN RecName: Full=60S ribosomal protein L3-like gi|74267896|gb|AAI03273.1| Ribosomal protein L3-like [Bos taurus] gi|296473512|gb|DAA15627.1| 60S ribosomal protein L3-like [Bos taurus] Length = 407 Score = 45.5 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F+ +++DV +T G+G G R + L R G P RV + Sbjct: 209 SVFSQNEIIDVIAVTKGRGIKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 IARAGQKGYHHRTELNKKIYRI 287 >gi|60688481|gb|AAH91460.1| Ribosomal protein L3 [Danio rerio] gi|182889202|gb|AAI64784.1| Rpl3 protein [Danio rerio] Length = 403 Score = 45.5 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 3/83 (3%) Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159 + F+ +++DV G+T G G G R + L R G P RV Sbjct: 208 ANVFSQDEMIDVIGVTKGHGCKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAF 264 Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182 + AG+ G + T N ++ + Sbjct: 265 SVARAGQKGYHHRTEINKKIYKI 287 >gi|239789793|dbj|BAH71497.1| ACYPI009439 [Acyrthosiphon pisum] Length = 193 Score = 45.5 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 3/74 (4%) Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168 +D G+T G+G+ G R + L R G P RV AG+ G Sbjct: 2 IDCIGVTKGRGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVQFTVARAGQKG 58 Query: 169 GNRVTVKNLEVVSV 182 + T N ++ + Sbjct: 59 YHHRTEINKKIYRI 72 >gi|126335506|ref|XP_001366065.1| PREDICTED: similar to Ribosomal protein L3-like [Monodelphis domestica] Length = 505 Score = 45.1 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F+ +++DV +T G+G G R + L R G P RV + Sbjct: 307 VFSQSEVIDVIAVTKGRGMKGVTSRWHAKKLP--RKTHKGLRKVACIGAW-HPARVGYSI 363 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 364 ARAGQKGYHHRTELNKKIYRI 384 >gi|291415728|ref|XP_002724100.1| PREDICTED: ribosomal protein L3-like [Oryctolagus cuniculus] Length = 407 Score = 45.1 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F+ +++DV +T G+G G R + L R G P RV + Sbjct: 209 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 IARAGQKGYHHRTELNKKIYRI 287 >gi|74185237|dbj|BAE30097.1| unnamed protein product [Mus musculus] Length = 403 Score = 45.1 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T KG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVTKDKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287 >gi|197632293|gb|ACH70870.1| ribosomal protein L3 [Salmo salar] Length = 403 Score = 45.1 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + FT +++DV G+T G G+ G R + L R G F Sbjct: 209 NVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAWHLSRVAFS- 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 VARAGQKGYHHRTEINKKIYKI 287 >gi|14336774|gb|AAK61301.1|AE006640_5 60S ribosomal protein L3 like [Homo sapiens] Length = 406 Score = 45.1 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F+ +++DV +T G+G G R + L R G P RV + Sbjct: 208 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 264 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 265 IARAGQKGYHHRTELNKKIFRI 286 >gi|4826988|ref|NP_005052.1| 60S ribosomal protein L3-like [Homo sapiens] gi|2500230|sp|Q92901|RL3L_HUMAN RecName: Full=60S ribosomal protein L3-like gi|1638884|gb|AAC50777.1| ribosomal protein L3-like [Homo sapiens] gi|30046542|gb|AAH50413.1| Ribosomal protein L3-like [Homo sapiens] gi|119606005|gb|EAW85599.1| ribosomal protein L3-like [Homo sapiens] Length = 407 Score = 45.1 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F+ +++DV +T G+G G R + L R G P RV + Sbjct: 209 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 IARAGQKGYHHRTELNKKIFRI 287 >gi|73959559|ref|XP_547185.2| PREDICTED: similar to 60S ribosomal protein L3-like [Canis familiaris] Length = 494 Score = 45.1 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F+ +++DV +T G+G G R + L R G P RV + Sbjct: 296 SVFSQNEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 352 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 353 IARAGQKGYHHRTELNKKIYRI 374 >gi|255653009|ref|NP_001157417.1| ribosomal protein L3-like isoform 1 [Mus musculus] Length = 407 Score = 44.8 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F+ +++DV +T G+G G R + L R G P RV + Sbjct: 209 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 IARAGQKGYHHRTELNKKIYRI 287 >gi|224070234|ref|XP_002187558.1| PREDICTED: similar to MGC108366 protein [Taeniopygia guttata] Length = 380 Score = 44.8 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F+ +++DV G+T G G G R + L R G P RV + Sbjct: 182 SVFSQNEMIDVIGVTKGHGMKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGYS 238 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 239 IARAGQKGYHHRTEINKKIYRI 260 >gi|189053728|dbj|BAG35980.1| unnamed protein product [Homo sapiens] Length = 407 Score = 44.8 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F+ +++DV +T G+G G R + L R G P RV + Sbjct: 209 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 IARAGQKGYHHRTELNKKIFRI 287 >gi|300797628|ref|NP_001178518.1| 60S ribosomal protein L3-like [Rattus norvegicus] gi|109490334|ref|XP_001058430.1| PREDICTED: ribosomal protein L3-like [Rattus norvegicus] Length = 407 Score = 44.8 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F+ +++DV +T G+G G R + L R G P RV + Sbjct: 209 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 IARAGQKGYHHRTELNKKIYRI 287 >gi|109127211|ref|XP_001082003.1| PREDICTED: 60S ribosomal protein L3-like [Macaca mulatta] Length = 407 Score = 44.8 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F+ +++DV +T G+G G R + L R G P RV + Sbjct: 209 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 IARAGQKGYHHRTELNKKIYRI 287 >gi|281341592|gb|EFB17176.1| hypothetical protein PANDA_008982 [Ailuropoda melanoleuca] Length = 407 Score = 44.8 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F+ +++DV +T G+G G R + L R G P RV + Sbjct: 209 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 IARAGQKGYHHRTELNKKIYRI 287 >gi|3642669|gb|AAC36524.1| ribosomal protein L3 [Mus musculus] Length = 117 Score = 44.8 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 28 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 84 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 85 ARAGQKGYHHRTEINKKIYKI 105 >gi|301791988|ref|XP_002930962.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L3-like, partial [Ailuropoda melanoleuca] Length = 355 Score = 44.8 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 61/203 (30%), Gaps = 38/203 (18%) Query: 3 SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52 + + K GMT + G ++ VT++ + V GY G Sbjct: 48 TAFLGYKAGMTHIVXEVSRPGSKVKKKEIVEDVTIVEAPSMVV------GTMGYEETIQG 101 Query: 53 AGEAK---VKNVSKPMRGFFSSVNVSPKKKLFEFR----------VQKDDDLLPVGSVFS 99 K +++ + F KK ++ ++KD + + G + Sbjct: 102 LCTLKTIFAEHIHDKCKRHFYKNWGKSKKAFNKYCKWQDNDGKQQLEKDFNSMRYGQIIH 161 Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159 + V +T GKG+ + L + G G F Sbjct: 162 DEM------IHVISVTKGKGYKEVTSHWHTKKLPCKTHQGLC--KVGCIGAWHPAQVAFS 213 Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 214 -MAWAGQKGYHHCTEINKKIYKI 235 >gi|149751051|ref|XP_001497954.1| PREDICTED: similar to Ribosomal protein L3-like [Equus caballus] Length = 407 Score = 44.8 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F+ +++DV +T G+G G R + L R G P RV + Sbjct: 209 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 IARAGQKGYHHRTELNKKIYRI 287 >gi|291402716|ref|XP_002717715.1| PREDICTED: ribosomal protein L3-like [Oryctolagus cuniculus] Length = 428 Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + R G F Sbjct: 236 VFGQDKMIDVIGVTKGKGYKGVTSRW--HTKKLLRKTHRGLRKVACIGAWHPAHVAFS-V 292 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 293 ARAGQKGYHHRTEINKKIYKI 313 >gi|114660361|ref|XP_001160309.1| PREDICTED: similar to ribosomal protein L3-like [Pan troglodytes] Length = 407 Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F+ +++DV +T G+G G R + L R G P RV + Sbjct: 209 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 265 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 266 IARAGQKGYHHRTELNKKIFRI 287 >gi|13384820|ref|NP_079701.1| ribosomal protein L3-like isoform 2 [Mus musculus] gi|12832343|dbj|BAB22066.1| unnamed protein product [Mus musculus] gi|12835407|dbj|BAB23247.1| unnamed protein product [Mus musculus] gi|148690417|gb|EDL22364.1| ribosomal protein L3-like [Mus musculus] gi|148877901|gb|AAI45877.1| Ribosomal protein L3-like [Mus musculus] gi|148877992|gb|AAI45879.1| Ribosomal protein L3-like [Mus musculus] Length = 240 Score = 44.0 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F+ +++DV +T G+G G R + L R G P RV + Sbjct: 42 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 98 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 99 IARAGQKGYHHRTELNKKIYRI 120 >gi|326574320|gb|ADZ95675.1| 60S ribosomal protein L3 [Nosema bombycis] Length = 664 Score = 44.0 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 18/78 (23%) Query: 148 TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVK-------------GC 194 G P RV AG+MG +R T N +V + + LI K G Sbjct: 391 IGAW-HPSRVMTTVARAGQMGFHRRTETNKKVYMIGNGNELI--KTEFDLTEKPITPLGG 447 Query: 195 VP--GAKKNSWILVRDSF 210 +P G+ KN +I+V+ + Sbjct: 448 IPHYGSIKNDYIMVKGAV 465 >gi|55391486|gb|AAH85243.1| Rpl3l protein [Mus musculus] Length = 281 Score = 44.0 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F+ +++DV +T G+G G R + L R G P RV + Sbjct: 83 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 139 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 140 IARAGQKGYHHRTELNKKIYRI 161 >gi|296237103|ref|XP_002763611.1| PREDICTED: 60S ribosomal protein L3-like isoform 1 [Callithrix jacchus] Length = 403 Score = 44.0 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G++ KG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVSKRKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287 >gi|149052059|gb|EDM03876.1| rCG33081 [Rattus norvegicus] Length = 255 Score = 44.0 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 S F+ +++DV +T G+G G R + L R G P RV + Sbjct: 57 SVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCS 113 Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 114 IARAGQKGYHHRTELNKKIYRI 135 >gi|148807241|gb|ABR13330.1| putative 60S ribosomal protein L3 [Prunus dulcis] Length = 284 Score = 43.6 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 34/116 (29%), Gaps = 6/116 (5%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + + K + + V+ + V+ F +++D Sbjct: 169 LAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQK--VEFAKSFFEKQVPIDA-VFQKDEMID 225 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166 + G+T GKG+ G + R L R G P R AG Sbjct: 226 IIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW-HPARFSXTVARAGH 278 >gi|109100340|ref|XP_001106805.1| PREDICTED: 60S ribosomal protein L3-like isoform 2 [Macaca mulatta] Length = 403 Score = 43.2 bits (101), Expect = 0.022, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G + L R G R P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSHWHTKKLP--RKTHRGLRKVACIGAR-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + T N ++ + Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287 >gi|294919384|ref|XP_002778527.1| ribosomal protein L3, putative [Perkinsus marinus ATCC 50983] gi|239887018|gb|EER10322.1| ribosomal protein L3, putative [Perkinsus marinus ATCC 50983] Length = 178 Score = 43.2 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 26/74 (35%), Gaps = 3/74 (4%) Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168 VD+ G+T G G + R L R G P RV AG+MG Sbjct: 2 VDIIGVTKGHGNTSVTTRWGVTRL--ARKTHRGLRKVACIGAW-HPARVQFQVPRAGQMG 58 Query: 169 GNRVTVKNLEVVSV 182 + N ++ + Sbjct: 59 YHHRVEINKKIYRI 72 >gi|149620465|ref|XP_001511933.1| PREDICTED: similar to Ribosomal protein L3-like [Ornithorhynchus anatinus] Length = 342 Score = 42.8 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 3/81 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F+ ++VDV +T G+G G R + L R G P RV + Sbjct: 216 AVFSQNEMVDVIAVTKGRGMKGVTSRWHAKKLP--RKTHKGLRKVACIGAW-HPARVGYS 272 Query: 161 KKMAGRMGGNRVTVKNLEVVS 181 AG+ G + T N ++ Sbjct: 273 IARAGQKGYHHRTEINKKIYR 293 >gi|198435984|ref|XP_002132034.1| PREDICTED: similar to ribosomal protein L3 [Ciona intestinalis] Length = 411 Score = 42.8 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 3/81 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160 + F +++D+ G+ G G G R + L R G P RV + Sbjct: 209 NIFAKDEMIDIIGVNKGHGEKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVAYS 265 Query: 161 KKMAGRMGGNRVTVKNLEVVS 181 +G+ G + T N ++ Sbjct: 266 VARSGQKGYHHRTEVNKKIYR 286 >gi|226475920|emb|CAX72050.1| ribosomal protein L3 [Schistosoma japonicum] Length = 202 Score = 42.1 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 3/68 (4%) Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174 T GKGF G R + L R G P RV ++ AG+ G T Sbjct: 6 TKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVARSVARAGQKGYFHRTE 62 Query: 175 KNLEVVSV 182 N ++ + Sbjct: 63 LNKKIYRI 70 >gi|119580720|gb|EAW60316.1| ribosomal protein L3, isoform CRA_g [Homo sapiens] Length = 286 Score = 41.3 bits (96), Expect = 0.098, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 3/77 (3%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G P RV + Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMGGNRVTVKNLE 178 AG+ G + T N + Sbjct: 267 ARAGQKGYHHRTEINKK 283 >gi|309266996|ref|XP_001476854.2| PREDICTED: 60S ribosomal protein L3-like, partial [Mus musculus] Length = 180 Score = 40.9 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 24/67 (35%), Gaps = 3/67 (4%) Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175 GKG+ G R + L R G P RV + AG+ G + T Sbjct: 1 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSVARAGQKGYHYRTEI 57 Query: 176 NLEVVSV 182 N ++ + Sbjct: 58 NKKIYKI 64 >gi|213863398|ref|ZP_03386653.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 33 Score = 40.9 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 VD + G++L+KG VPG + ++VR + K Sbjct: 1 VDAENGVLLIKGAVPG-RTGGLVMVRSAIKRG 31 >gi|987972|emb|CAA90883.1| ribosomal protein L3 [Rickettsia prowazekii] Length = 23 Score = 40.5 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 13/23 (56%), Positives = 20/23 (86%) Query: 1 MRSGVVARKLGMTCVYNIEGRRI 23 MR+G++A+K+GMT V+N +G RI Sbjct: 1 MRTGIIAQKVGMTSVFNDKGERI 23 >gi|297715281|ref|XP_002834016.1| PREDICTED: 60S ribosomal protein L3-like, partial [Pongo abelii] Length = 199 Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 3/76 (3%) Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166 +++DV +T G+G G R + L R G P RV + AG+ Sbjct: 83 EVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPARVGCSIARAGQ 139 Query: 167 MGGNRVTVKNLEVVSV 182 G + T N ++ + Sbjct: 140 KGYHHRTELNKKIYRI 155 >gi|190895944|gb|ACE96485.1| casein kinase II regulatory subunit [Populus tremula] gi|190895946|gb|ACE96486.1| casein kinase II regulatory subunit [Populus tremula] gi|190895948|gb|ACE96487.1| casein kinase II regulatory subunit [Populus tremula] gi|190895950|gb|ACE96488.1| casein kinase II regulatory subunit [Populus tremula] gi|190895952|gb|ACE96489.1| casein kinase II regulatory subunit [Populus tremula] gi|190895954|gb|ACE96490.1| casein kinase II regulatory subunit [Populus tremula] gi|190895958|gb|ACE96492.1| casein kinase II regulatory subunit [Populus tremula] gi|190895960|gb|ACE96493.1| casein kinase II regulatory subunit [Populus tremula] gi|190895962|gb|ACE96494.1| casein kinase II regulatory subunit [Populus tremula] gi|190895964|gb|ACE96495.1| casein kinase II regulatory subunit [Populus tremula] gi|190895966|gb|ACE96496.1| casein kinase II regulatory subunit [Populus tremula] gi|190895968|gb|ACE96497.1| casein kinase II regulatory subunit [Populus tremula] gi|190895970|gb|ACE96498.1| casein kinase II regulatory subunit [Populus tremula] gi|190895972|gb|ACE96499.1| casein kinase II regulatory subunit [Populus tremula] gi|190895974|gb|ACE96500.1| casein kinase II regulatory subunit [Populus tremula] Length = 99 Score = 38.6 bits (89), Expect = 0.64, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 29/101 (28%), Gaps = 5/101 (4%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + + K + + V+ + V F +++D Sbjct: 2 LAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQK--VDFAYGFFEKQVPIDA-VFQKDEMID 58 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151 V G+T GKG+ G + R L R G Sbjct: 59 VIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW 97 >gi|325577125|ref|ZP_08147609.1| AT family autotransporter/adhesin [Haemophilus parainfluenzae ATCC 33392] gi|325160707|gb|EGC72828.1| AT family autotransporter/adhesin [Haemophilus parainfluenzae ATCC 33392] Length = 1348 Score = 38.2 bits (88), Expect = 0.71, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 15/23 (65%) Query: 3 SGVVARKLGMTCVYNIEGRRIPV 25 G+V RK+G+T ++ +G + V Sbjct: 2 IGLVGRKVGVTRIFKEDGVSVAV 24 >gi|190895956|gb|ACE96491.1| casein kinase II regulatory subunit [Populus tremula] Length = 99 Score = 38.2 bits (88), Expect = 0.71, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 29/101 (28%), Gaps = 5/101 (4%) Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110 + + + K + + V+ + V F +++D Sbjct: 2 LAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQK--VDFGYGFFEKQVPIDA-VFQKDEMID 58 Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151 V G+T GKG+ G + R L R G Sbjct: 59 VIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAW 97 >gi|40641603|emb|CAE54281.1| putative ribosomal protein [Triticum aestivum] Length = 98 Score = 37.4 bits (86), Expect = 1.4, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 2/52 (3%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152 + F +++D+ G+T GKG+ G + R L R G Sbjct: 48 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGAWA 97 >gi|291288660|ref|YP_003505476.1| thiamine monophosphate synthase [Denitrovibrio acetiphilus DSM 12809] gi|290885820|gb|ADD69520.1| thiamine monophosphate synthase [Denitrovibrio acetiphilus DSM 12809] Length = 181 Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 15/99 (15%) Query: 40 TLDKNGYMAVQVG---AGEAKVKNVSKPMRGFFS-------SVNVSPKKKLFEFRVQKDD 89 T K GY AVQ+G E+ ++ K G+ + S V F +K+ Sbjct: 64 TASKYGYDAVQLGKDSYIESVRRDFPKLRIGYSAHSMDELESKGVDYFTLSPIFFTKKNY 123 Query: 90 DLLPVGSV----FSPSYFT-VGQLVDVTGMTIGKGFSGA 123 ++ P+G+V + G + GKGF+G Sbjct: 124 EVKPLGTVDVSHIDSEIYALGGISSENINRLKGKGFAGV 162 >gi|255636886|gb|ACU18776.1| unknown [Glycine max] Length = 257 Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 2/50 (4%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150 + F +++D+ G+T GKG+ G + R L R G Sbjct: 210 AVFHKDEMIDIVGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIGA 257 >gi|291391876|ref|XP_002712286.1| PREDICTED: ribosomal protein L3-like [Oryctolagus cuniculus] Length = 188 Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 9/77 (11%) Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHR---SHGSTGCRQDPGRVFKNKKMAG 165 ++VTG+T GKG+ G R + L +HR G + F A Sbjct: 2 INVTGVTKGKGYKGVTSRWHTKKLPR-----KTHRGLPKVACIGAWHLARKAFS-VAWAR 55 Query: 166 RMGGNRVTVKNLEVVSV 182 + G + T N ++ + Sbjct: 56 QKGYHHRTEINKKIYKI 72 >gi|347964|gb|AAA91344.1| TARBP-b [Homo sapiens] Length = 277 Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 25/71 (35%), Gaps = 3/71 (4%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++DV G+T GKG+ G R + L R G F Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAWHPVRVAFS-V 266 Query: 162 KMAGRMGGNRV 172 AG+ G + Sbjct: 267 ARAGQKGYHHR 277 >gi|193077372|gb|ABO12176.2| ABC transporter-like protein [Acinetobacter baumannii ATCC 17978] Length = 753 Score = 36.3 bits (83), Expect = 2.7, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 7/64 (10%) Query: 147 STG-CRQDPGRVFKNKKMAGRMGGNRVTVKN-----LEVVSVDDKRGLILVKGCVPGAKK 200 S+G R KK RMG +++KN L+ + VD + + V V G+ K Sbjct: 433 SSGLAGAFFRRPNTYKKEP-RMGNEWISIKNAHLFNLKNIDVDIPKNCLTVITGVAGSGK 491 Query: 201 NSWI 204 ++ I Sbjct: 492 STLI 495 >gi|126641794|ref|YP_001084778.1| ABC transporter-like protein [Acinetobacter baumannii ATCC 17978] Length = 669 Score = 36.3 bits (83), Expect = 2.7, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 7/64 (10%) Query: 147 STG-CRQDPGRVFKNKKMAGRMGGNRVTVKN-----LEVVSVDDKRGLILVKGCVPGAKK 200 S+G R KK RMG +++KN L+ + VD + + V V G+ K Sbjct: 349 SSGLAGAFFRRPNTYKKEP-RMGNEWISIKNAHLFNLKNIDVDIPKNCLTVITGVAGSGK 407 Query: 201 NSWI 204 ++ I Sbjct: 408 STLI 411 >gi|77553900|gb|ABA96696.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 1287 Score = 35.9 bits (82), Expect = 3.5, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 33/107 (30%), Gaps = 10/107 (9%) Query: 46 YMAVQVGAGEAKVKNV--------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV 97 Y A+ VG +AK V SK + G K++ + ++ + + Sbjct: 943 YEAILVGLKKAKALGVRRLLIRTDSKLVAGHVDKS-FEAKEEGMKRYLEAVRSMEKCFAD 1001 Query: 98 FSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRS 144 + + GQ + + ++R F H R Sbjct: 1002 ITVEHLPRGQNEEADALAKSASCGAHIRRAPFSKSYM-HQARKWRRK 1047 >gi|70909597|emb|CAJ17224.1| ribosomal protein L3e [Micromalthus debilis] Length = 178 Score = 35.9 bits (82), Expect = 3.6, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 22/65 (33%), Gaps = 3/65 (4%) Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177 KG+ G R + L R G P RV AG+ G + T N Sbjct: 1 KGYKGVTSRWHTKKLP--RKTHKGLRKVACIGAW-HPSRVSFTVARAGQKGYHHRTEVNK 57 Query: 178 EVVSV 182 ++ + Sbjct: 58 KIYRI 62 >gi|119630150|gb|EAX09745.1| hCG1794419, isoform CRA_a [Homo sapiens] Length = 188 Score = 35.9 bits (82), Expect = 4.2, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 3/75 (4%) Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168 +D+ G+T GKG+ G + L H G F AG+ G Sbjct: 2 IDIIGVTKGKGYKGVTSCWHTKKLP--HKTHRGLCKVAWIGAWHPDHVAFS-MACAGQKG 58 Query: 169 GNRVTVKNLEVVSVD 183 + T N ++ +D Sbjct: 59 DHHHTEINKKICKID 73 >gi|148682756|gb|EDL14703.1| mCG1036344 [Mus musculus] Length = 360 Score = 35.9 bits (82), Expect = 4.4, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 4/81 (4%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 F +++ V +T GKG+ G R + L R G P RV + Sbjct: 214 VFGQDEMIIVIDVTKGKGYKGVTSRWHTKKLP--RKTHQGLRKVACIGAW-HPARVAFSV 270 Query: 162 KMAGRMGGNRVTVKNLEVVSV 182 AG+ G + N ++ + Sbjct: 271 AQAGQKGYHHRKETN-KIYKI 290 >gi|324516200|gb|ADY46457.1| 60S ribosomal protein L3 [Ascaris suum] Length = 204 Score = 35.1 bits (80), Expect = 6.6, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 22/48 (45%) Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148 S F +++D G+T GKGF G R + L + + +G T Sbjct: 57 SVFAQDEMIDCIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKKRNGGT 104 >gi|126173842|ref|YP_001049991.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS155] gi|125997047|gb|ABN61122.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS155] Length = 621 Score = 35.1 bits (80), Expect = 6.7, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 30/95 (31%), Gaps = 7/95 (7%) Query: 27 VLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ 86 V+ L+ VVV R + + + + + R N + + K E Q Sbjct: 461 VIELEPNHVVVVRVKEHHDAGTLALA-----EVKANIAERLKQDQANEAARAKAQELMAQ 515 Query: 87 KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 +G V Q VD +GK F Sbjct: 516 VKAGATDLGLVAKAKLGRGAQDVDAA--IVGKAFQ 548 >gi|302864881|ref|YP_003833518.1| hypothetical protein Micau_0375 [Micromonospora aurantiaca ATCC 27029] gi|315501165|ref|YP_004080052.1| hypothetical protein ML5_0349 [Micromonospora sp. L5] gi|302567740|gb|ADL43942.1| hypothetical protein Micau_0375 [Micromonospora aurantiaca ATCC 27029] gi|315407784|gb|ADU05901.1| hypothetical protein ML5_0349 [Micromonospora sp. L5] Length = 681 Score = 35.1 bits (80), Expect = 7.4, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 41/168 (24%), Gaps = 10/168 (5%) Query: 44 NGYMAVQVGAGEAKVKN------VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV 97 + Y A Q+G A+ + G P E+ V + +G Sbjct: 50 DSYTAEQLGRHMARRVKELADDPTTPLFFGRLDFGGDDPDHAGREYHVGRRHVTDELGEP 109 Query: 98 FSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRV 157 + +R F T G Sbjct: 110 LVLDWRAPVSRSFYRASARDPQGVAVRRRFGFSAGTLTSFEDEHLDRGEELGTASRILTA 169 Query: 158 FKNKKMAGRMGGNRVTVKNL--EVVSVDDKRGLILVKGCVPGAKKNSW 203 + G M T++ E+V D I V+G PG K + Sbjct: 170 EIERPRVGPMRDIVATIQPEQDELVRADLTDS-ICVQGA-PGTGKTAV 215 >gi|153000126|ref|YP_001365807.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS185] gi|160874748|ref|YP_001554064.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS195] gi|151364744|gb|ABS07744.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS185] gi|160860270|gb|ABX48804.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS195] gi|315266990|gb|ADT93843.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Shewanella baltica OS678] Length = 621 Score = 34.7 bits (79), Expect = 8.0, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 31/95 (32%), Gaps = 7/95 (7%) Query: 27 VLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ 86 V+ L+ VVV R + + + + + R N + + K E Q Sbjct: 461 VIELEPNHVVVVRVKEHHDAGTLALA-----EVKANIAERLKQDQANEAARAKAQELMAQ 515 Query: 87 KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121 + +G V Q VD +GK F Sbjct: 516 VKAGAMDLGLVAKAKLGRGAQDVDAA--IVGKAFQ 548 >gi|323650150|gb|ADX97161.1| 60S ribosomal protein l3 [Perca flavescens] Length = 276 Score = 34.7 bits (79), Expect = 10.0, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 3/67 (4%) Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 FT +++DV G+T G + G R + L R G P RV + Sbjct: 210 VFTQDEMIDVIGITKGHRYKGVTSRWHTKKLP--RKTHRGLRKVACIGAW-HPARVAFSV 266 Query: 162 KMAGRMG 168 AG+ G Sbjct: 267 ARAGQKG 273 Database: nr Posted date: May 13, 2011 4:10 AM Number of letters in database: 999,999,932 Number of sequences in database: 2,987,209 Database: /data/usr2/db/fasta/nr.01 Posted date: May 13, 2011 4:17 AM Number of letters in database: 999,998,956 Number of sequences in database: 2,896,973 Database: /data/usr2/db/fasta/nr.02 Posted date: May 13, 2011 4:23 AM Number of letters in database: 999,999,979 Number of sequences in database: 2,907,862 Database: /data/usr2/db/fasta/nr.03 Posted date: May 13, 2011 4:29 AM Number of letters in database: 999,999,513 Number of sequences in database: 2,932,190 Database: /data/usr2/db/fasta/nr.04 Posted date: May 13, 2011 4:33 AM Number of letters in database: 792,586,372 Number of sequences in database: 2,260,650 Lambda K H 0.315 0.164 0.524 Lambda K H 0.267 0.0502 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,905,196,389 Number of Sequences: 13984884 Number of extensions: 246060897 Number of successful extensions: 522984 Number of sequences better than 10.0: 2749 Number of HSP's better than 10.0 without gapping: 4476 Number of HSP's successfully gapped in prelim test: 526 Number of HSP's that attempted gapping in prelim test: 507574 Number of HSP's gapped (non-prelim): 5982 length of query: 221 length of database: 4,792,584,752 effective HSP length: 134 effective length of query: 87 effective length of database: 2,918,610,296 effective search space: 253919095752 effective search space used: 253919095752 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 79 (34.7 bits)